341 c1sjaA_ Probab=67.16   E-value=8.1  Score=17.53  Aligned_columns=148  Identities=16%

Q ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHH--------------
Q ss_conf             884257997899998876653026706986635884315889999862499807971778883467--------------
Q batch____        73 TAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHF--------------  138 (347)
Q Consensus        73 g~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------  138 (347)
                      ..++...++++..+..+.........+.+-++ ...+.++.+.....-..--.+.+|.+..+....              
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig-~~~d~~~i~~ir~~~g~~~~l~vDaN~~~~~~~a~~l~~l~~~~i~~  212 (368)
T c1sjaA_         134 VSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE-PGWDVEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLL  212 (368)
T ss_dssp             EEECCCSSHHHHHHHHHHHHHHTCSCEEEECB-TTBSHHHHHHHHHHHCSSSCEEEECTTCBCGGGHHHHHTTGGGCCSC
T ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCEEEEECC-HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEE
T ss_conf             99317799999999999999679979999778-77999999999996499978999768889899999999733388158


Q ss_pred             ---------HHHHHHHHHHCCCCCEEECCCC-CHHHHHHHHHCC-CCEEEE-CCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             ---------7789999972686718974779-999999999669-989998-2878876665433566755599999999
Q batch____       139 ---------VQFVAKAREAWPTKTICAGNVV-TGEMCEELILSG-ADIVKV-GIGPGSVCTTRVKTGVGYPQLSAVIECA  206 (347)
Q Consensus       139 ---------~~~i~~i~~~~~~~~ii~k~v~-s~e~a~~l~~aG-ad~I~V-~g~gG~~~~~~~~~~~g~p~~~~l~~~~  206 (347)
                               ++..+++++..+ +||..++-. +.++.+.+++.| +|++.+ -..-|+              ++....+.
T Consensus       213 iEeP~~~~d~~~~~~l~~~~~-~pia~dEs~~~~~~~~~~~~~~~~d~i~~k~~~~GG--------------i~~~~~~~  277 (368)
T c1sjaA_         213 IEQPLEEEDVLGHAELARRIQ-TPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGG--------------YLEARRVH  277 (368)
T ss_dssp             EECCBCTTCHHHHHHHTTTCS-SCEEESTTCCSHHHHHHHHHHTCCSEEEECTTTTTS--------------HHHHHHHH
T ss_pred             ECCCCCCCCHHHHHHHHHHCC-CEEEECCCCCCHHHHHHHHHCCCCCEEEECHHHCCC--------------HHHHHHHH
T ss_conf             118888067888999998749-829847764899999999972999799815000488--------------68999999


Q ss_pred             HHHCCCCCEEEECCCCCCHHHHHHHHHCCC
Q ss_conf             971127957996088578999999997389
Q batch____       207 DAAHGLGGMIVSDGGCTTPGDVAKAFGGGA  236 (347)
Q Consensus       207 ~~~~~~~vpVIa~GGIr~g~Dv~kALalGA  236 (347)
                      +.++..++++...+-.-++...+.++.+.|
T Consensus       278 ~~A~~~gi~~~~~~~~~s~ig~aa~~~laa  307 (368)
T c1sjaA_         278 DVCAAHGIPVWCGGMIETGLGRAANVALAS  307 (368)
T ss_dssp             HHHHHTTCCEEECCCSCCHHHHHHHHHHHT
T ss_pred             HHHHHCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             999973982998287860799999999973