337 d2bona1 Probab=85.03   E-value=2.2  Score=20.17  Aligned_columns=115  Identities=15%

Q ss_pred             CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
Q ss_conf             53010147778688898899999986147899808999738988778899999999999779938999653889883466
Q batch____       499 IPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNL  578 (726)
Q Consensus       499 ~~~~~~~~~~s~~~e~~r~l~~~l~~~~~~~~~~~i~vtS~~~~eGkst~a~~LA~~~a~~g~rvLlID~dlr~~~l~~~  578 (726)
                      +..++.-||.|.-..+.+.+...+.    ..+.++-++.+..+++     +..++..++..+..+++|.+          
T Consensus         1 p~~lii~Np~Sg~~~~~~~~~~~l~----~~g~~~~~~~T~~~~~-----~~~~~~~~~~~~~d~Ivv~G----------   61 (285)
T d2bona1           1 PASLLILNGKSTDNLPLREAIMLLR----EEGMTIHVRVTWEKGD-----AARYVEEARKFGVATVIAGG----------   61 (285)
T ss_dssp             CCEEEEECSSSTTCHHHHHHHHHHH----TTTCCEEEEECCSTTH-----HHHHHHHHHHHTCSEEEEEE----------
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHH----HCCCCEEEEECCCHHH-----HHHHHHHHHHCCCCEEEEEC----------
T ss_conf             9079998889999703899999999----7898189997589227-----99999998644998999981----------


Q ss_pred             CCCCCCCCHHHHHCCCCCHHHHEECCCCCC------EEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf             389998888787627899889400167898------689956899999788725479999999998609999994
Q batch____       579 FTVSNEHGLSEYLAGKDELNKVIQHFGKGG------FDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVD  647 (726)
Q Consensus       579 ~~~~~~~gl~~~L~~~~~~~~~i~~~~~~~------l~il~~g~~~~~~~~ll~~~~~~~~l~~l~~~yD~ViiD  647 (726)
                                    |+.++.+++......+      |-+||.|....-...+-....+.+.+..+.. ...+-+|
T Consensus        62 --------------GDGTv~~vi~~l~~~~~~~~~~l~iiP~GT~N~~A~~lg~~~~~~~a~~~i~~-g~~~~iD  121 (285)
T d2bona1          62 --------------GDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIA-GDAIAID  121 (285)
T ss_dssp             --------------SHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHH-SEEEEEE
T ss_pred             --------------CCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHC-CCCEEEE
T ss_conf             --------------88559999999853885367519997078755879980899889999999973-9823876