Phyre 2 Results for P76147

Email | l.a.kelley@imperial.ac.uk
Description | P76147
Date | Thu Jan 5 12:19:41 GMT 2012
Unique Job ID | b85969e74e69360e

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1w25B_ |
|  | 100.0 | 32 | PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp
2 | c3ezuA_ |
|  | 100.0 | 27 | PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution
3 | c3breA_ |
|  | 100.0 | 33 | PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702
4 | c3i5aA_ |
|  | 100.0 | 32 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
5 | c3hvaA_ |
|  | 100.0 | 20 | PDB header:transferase Chain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx ggdef domain from pseudomonas2 aeruginosa
6 | c3i5cA_ |
|  | 100.0 | 32 | PDB header:signaling protein Chain: A: PDB Molecule:fusion of general control protein gcn4 and wspr response PDBTitle: crystal structure of a fusion protein containing the leucine zipper of2 gcn4 and the ggdef domain of wspr from pseudomonas aeruginosa
7 | c3ignA_ |
|  | 100.0 | 27 | PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a
8 | c3i5bA_ |
|  | 100.0 | 36 | PDB header:signaling protein Chain: A: PDB Molecule:wspr response regulator; PDBTitle: crystal structure of the isolated ggdef domain of wpsr from2 pseudomonas aeruginosa
9 | c3iclA_ |
|  | 99.9 | 28 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:eal/ggdef domain protein; PDBTitle: x-ray structure of protein (eal/ggdef domain protein) from2 m.capsulatus, northeast structural genomics consortium3 target mcr174c
10 | d1w25a3 |
|  | 99.9 | 37 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:GGDEF domain
11 | c3mtkA_ |
|  | 99.9 | 19 | PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase/phosphodiesterase; PDBTitle: x-ray structure of diguanylate cyclase/phosphodiesterase from2 caldicellulosiruptor saccharolyticus, northeast structural genomics3 consortium target clr27c
12 | c3qyyB_ |
|  | 99.9 | 30 | PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp
13 | c3pjwA_ |
|  | 99.9 | 17 | PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23
14 | c3hvwA_ |
|  | 99.9 | 14 | PDB header:lyase Chain: A: PDB Molecule:diguanylate-cyclase (dgc); PDBTitle: crystal structure of the ggdef domain of the pa2567 protein2 from pseudomonas aeruginosa, northeast structural genomics3 consortium target par365c
15 | c3gfzB_ |
|  | 99.3 | 11 | PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex
16 | c3p7nB_ |
|  | 98.1 | 6 | PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis
17 | c2qv6D_ |
|  | 97.2 | 17 | PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase iii; PDBTitle: gtp cyclohydrolase iii from m. jannaschii (mj0145)2 complexed with gtp and metal ions
18 | c1wc6B_ |
|  | 90.8 | 12 | PDB header:lyase Chain: B: PDB Molecule:adenylate cyclase; PDBTitle: soluble adenylyl cyclase cyac from s. platensis in complex2 with rp-atpalphas in presence of bicarbonate
19 | d1wc1a_ |
|  | 90.7 | 15 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:Adenylyl and guanylyl cyclase catalytic domain
20 | d1azsa_ |
|  | 89.6 | 15 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:Adenylyl and guanylyl cyclase catalytic domain
21 | c1cjkA_ |
| not modelled | 89.4 | 14 | PDB header:lyase/lyase/signaling protein Chain: A: PDB Molecule:adenylate cyclase, type v; PDBTitle: complex of gs-alpha with the catalytic domains of mammalian adenylyl2 cyclase: complex with adenosine 5'-(alpha thio)-triphosphate (rp),3 mg, and mn
22 | d1fx4a_ |
| not modelled | 89.2 | 18 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:Adenylyl and guanylyl cyclase catalytic domain
23 | c1y10C_ |
| not modelled | 89.2 | 16 | PDB header:lyase Chain: C: PDB Molecule:hypothetical protein rv1264/mt1302; PDBTitle: mycobacterial adenylyl cyclase rv1264, holoenzyme, inhibited state
24 | d1fx2a_ |
| not modelled | 88.7 | 15 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:Adenylyl and guanylyl cyclase catalytic domain
25 | c3et6A_ |
| not modelled | 88.4 | 14 | PDB header:lyase Chain: A: PDB Molecule:soluble guanylyl cyclase beta; PDBTitle: the crystal structure of the catalytic domain of a eukaryotic2 guanylate cyclase
26 | c3uvjC_ |
| not modelled | 86.0 | 11 | PDB header:lyase Chain: C: PDB Molecule:guanylate cyclase soluble subunit alpha-3; PDBTitle: crystal structure of the catalytic domain of the heterodimeric human2 soluble guanylate cyclase 1.
27 | c3mr7B_ |
| not modelled | 84.9 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:adenylate/guanylate cyclase/hydrolase, alpha/beta fold PDBTitle: crystal structure of adenylate/guanylate cyclase/hydrolase from2 silicibacter pomeroyi
28 | c2w01C_ |
| not modelled | 84.2 | 12 | PDB header:lyase Chain: C: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of the guanylyl cyclase cya2
29 | c3r5gB_ |
| not modelled | 82.3 | 20 | PDB header:lyase Chain: B: PDB Molecule:cyab; PDBTitle: crystal structure of the adenylyl cyclase cyab from p. aeruginosa
30 | d1vh8a_ |
| not modelled | 76.6 | 10 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
31 | c3b6nA_ |
| not modelled | 76.1 | 10 | PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: crystal structure of 2c-methyl-d-erythritol 2,4-2 cyclodiphosphate synthase pv003920 from plasmodium vivax
32 | c1s97D_ |
| not modelled | 73.0 | 15 | PDB header:transferase/dna Chain: D: PDB Molecule:dna polymerase iv; PDBTitle: dpo4 with gt mismatch
33 | c1ybuA_ |
| not modelled | 72.6 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:lipj; PDBTitle: mycobacterium tuberculosis adenylyl cyclase rv1900c chd, in complex2 with a substrate analog.
34 | c2pmpA_ |
| not modelled | 72.4 | 12 | PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from2 the isoprenoid biosynthetic pathway of arabidopsis thaliana
35 | d1w55a2 |
| not modelled | 70.5 | 11 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
36 | d1t0aa_ |
| not modelled | 70.1 | 14 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
37 | d1gx1a_ |
| not modelled | 69.4 | 12 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
38 | d1iv3a_ |
| not modelled | 68.8 | 14 | Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like
39 | c2aq4A_ |
| not modelled | 67.9 | 23 | PDB header:transferase Chain: A: PDB Molecule:dna repair protein rev1; PDBTitle: ternary complex of the catalytic core of rev1 with dna and dctp.
40 | c3f0gA_ |
| not modelled | 67.9 | 12 | PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase with cmp
41 | c1yk9A_ |
| not modelled | 66.2 | 12 | PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of a mutant form of the mycobacterial2 adenylyl cyclase rv1625c
42 | d1im4a_ |
| not modelled | 64.1 | 20 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Lesion bypass DNA polymerase (Y-family), catalytic domain
43 | c3gqcB_ |
| not modelled | 61.0 | 24 | PDB header:transferase/dna Chain: B: PDB Molecule:dna repair protein rev1; PDBTitle: structure of human rev1-dna-dntp ternary complex
44 | c3re3B_ |
| not modelled | 57.8 | 12 | PDB header:lyase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase from francisella tularensis
45 | c1k1qA_ |
| not modelled | 55.6 | 18 | PDB header:transcription Chain: A: PDB Molecule:dbh protein; PDBTitle: crystal structure of a dinb family error prone dna2 polymerase from sulfolobus solfataricus
46 | c2wz1B_ |
| not modelled | 55.3 | 9 | PDB header:lyase Chain: B: PDB Molecule:guanylate cyclase soluble subunit beta-1; PDBTitle: structure of the catalytic domain of human soluble2 guanylate cyclase 1 beta 3.
47 | c1w57A_ |
| not modelled | 55.1 | 10 | PDB header:transferase Chain: A: PDB Molecule:ispd/ispf bifunctional enzyme; PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn
48 | d1jx4a2 |
| not modelled | 51.0 | 15 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Lesion bypass DNA polymerase (Y-family), catalytic domain
49 | c2r8kB_ |
| not modelled | 50.7 | 28 | PDB header:replication, transferase/dna Chain: B: PDB Molecule:dna polymerase eta; PDBTitle: structure of the eukaryotic dna polymerase eta in complex with 1,2-2 d(gpg)-cisplatin containing dna
50 | d1azsb_ |
| not modelled | 40.5 | 11 | Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:Adenylyl and guanylyl cyclase catalytic domain
51 | c1jihA_ |
| not modelled | 37.8 | 29 | PDB header:translation Chain: A: PDB Molecule:dna polymerase eta; PDBTitle: yeast dna polymerase eta
52 | c3mr2A_ |
| not modelled | 32.7 | 32 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase eta; PDBTitle: human dna polymerase eta in complex with normal dna and incoming2 nucleotide (nrm)
53 | c2oh2B_ |
| not modelled | 31.3 | 21 | PDB header:transferase/dna Chain: B: PDB Molecule:dna polymerase kappa; PDBTitle: ternary complex of human dna polymerase
54 | c1xaxA_ |
| not modelled | 24.9 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0054 protein hi0004; PDBTitle: nmr structure of hi0004, a putative essential gene product2 from haemophilus influenzae
55 | d1k1sa2 |
| not modelled | 24.9 | 16 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Lesion bypass DNA polymerase (Y-family), catalytic domain
56 | d2ox6a1 |
| not modelled | 20.5 | 12 | Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:YdiL-like
57 | c3qkbB_ |
| not modelled | 20.0 | 20 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein with unknown function which belongs to2 pfam duf74 family (pepe_0654) from pediococcus pentosaceus atcc 257453 at 2.73 a resolution
58 | d1jiha2 |
| not modelled | 19.5 | 28 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Lesion bypass DNA polymerase (Y-family), catalytic domain
59 | c1yy3A_ |
| not modelled | 19.0 | 18 | PDB header:isomerase Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase- PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea)
60 | d2o5aa1 |
| not modelled | 17.3 | 10 | Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like
61 | d1wdia_ |
| not modelled | 16.9 | 18 | Fold:QueA-like Superfamily:QueA-like Family:QueA-like
62 | c2uzhB_ |
| not modelled | 15.3 | 21 | PDB header:lyase Chain: B: PDB Molecule:2c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: mycobacterium smegmatis 2c-methyl-d-erythritol-2,4-2 cyclodiphosphate synthase (ispf)
63 | c1qgeE_ |
| not modelled | 14.5 | 16 | PDB header:hydrolase Chain: E: PDB Molecule:protein (triacylglycerol hydrolase); PDBTitle: new crystal form of pseudomonas glumae (formerly chromobacterium2 viscosum atcc 6918) lipase
64 | c2y1bA_ |
| not modelled | 14.1 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:putative outer membrane protein, signal; PDBTitle: crystal structure of the e. coli outer membrane lipoprotein2 rcsf
65 | d2fiqa1 |
| not modelled | 12.8 | 15 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:GatZ-like
66 | c2bblA_ |
| not modelled | 11.0 | 14 | PDB header:viral protein Chain: A: PDB Molecule:genome linked protein vpg; PDBTitle: nmr structures of the peptide linked to the genome (vpg) of2 poliovirus in a stabilizing solvent
67 | c3l7xA_ |
| not modelled | 10.7 | 23 | PDB header:cell cycle Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
68 | d1xxaa_ |
| not modelled | 10.7 | 18 | Fold:DCoH-like Superfamily:C-terminal domain of arginine repressor Family:C-terminal domain of arginine repressor
69 | d2oyra1 |
| not modelled | 10.6 | 25 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhiQ-like
70 | d2djka1 |
| not modelled | 9.9 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
71 | c2r6zA_ |
| not modelled | 9.7 | 15 | PDB header:transferase Chain: A: PDB Molecule:upf0341 protein in rsp 3' region; PDBTitle: crystal structure of the sam-dependent methyltransferase2 ngo1261 from neisseria gonorrhoeae, northeast structural3 genomics consortium target ngr48
72 | c3iyuY_ |
| not modelled | 9.3 | 20 | PDB header:virus Chain: Y: PDB Molecule:outer capsid protein vp4; PDBTitle: atomic model of an infectious rotavirus particle
73 | c3onqB_ |
| not modelled | 9.1 | 7 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:regulator of polyketide synthase expression; PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis
74 | c1iojA_ |
| not modelled | 9.0 | 56 | PDB header:apolipoprotein Chain: A: PDB Molecule:apoc-i; PDBTitle: human apolipoprotein c-i, nmr, 18 structures
75 | d2dlxa1 |
| not modelled | 8.7 | 8 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:UAS domain
76 | c3anoA_ |
| not modelled | 8.6 | 19 | PDB header:transferase Chain: A: PDB Molecule:ap-4-a phosphorylase; PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
77 | d1ei7a_ |
| not modelled | 8.5 | 40 | Fold:Four-helical up-and-down bundle Superfamily:TMV-like viral coat proteins Family:TMV-like viral coat proteins
78 | d2pkwa1 |
| not modelled | 8.5 | 25 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhiQ-like
79 | d1nhoa_ |
| not modelled | 8.5 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
80 | c3kmlB_ |
| not modelled | 8.5 | 36 | PDB header:viral protein Chain: B: PDB Molecule:coat protein; PDBTitle: circular permutant of the tobacco mosaic virus
81 | c3upsA_ |
| not modelled | 8.3 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:iojap-like protein; PDBTitle: crystal structure of iojap-like protein from zymomonas mobilis
82 | d1zaka2 |
| not modelled | 8.3 | 29 | Fold:Rubredoxin-like Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
83 | c3hf3A_ |
| not modelled | 8.3 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:chromate reductase; PDBTitle: old yellow enzyme from thermus scotoductus sa-01
84 | c2zhoB_ |
| not modelled | 8.2 | 9 | PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of the regulatory subunit of aspartate2 kinase from thermus thermophilus (ligand free form)
85 | c3imiB_ |
| not modelled | 8.1 | 14 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hit family protein; PDBTitle: 2.01 angstrom resolution crystal structure of a hit family protein2 from bacillus anthracis str. 'ames ancestor'
86 | c2i46A_ |
| not modelled | 8.1 | 5 | PDB header:protein binding Chain: A: PDB Molecule:adrenocortical dysplasia protein homolog; PDBTitle: crystal structure of human tpp1
87 | d1vtmp_ |
| not modelled | 8.0 | 20 | Fold:Four-helical up-and-down bundle Superfamily:TMV-like viral coat proteins Family:TMV-like viral coat proteins
88 | d1xm5a_ |
| not modelled | 8.0 | 18 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Predicted metal-dependent hydrolase
89 | d1fo5a_ |
| not modelled | 7.9 | 8 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
90 | d2jnwa1 |
| not modelled | 7.8 | 10 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XPF/Rad1/Mus81 nuclease
91 | d2id1a1 |
| not modelled | 7.7 | 5 | Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like
92 | d1h2vc2 |
| not modelled | 7.7 | 36 | Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:MIF4G domain-like
93 | d1qgva_ |
| not modelled | 7.6 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:spliceosomal protein U5-15Kd
94 | c3nj2B_ |
| not modelled | 7.4 | 19 | PDB header:unknown function Chain: B: PDB Molecule:duf269-containing protein; PDBTitle: crystal structure of cce_0566 from the cyanobacterium cyanothece2 51142, a protein associated with nitrogen fixation from the duf2693 family
95 | c2htfA_ |
| not modelled | 7.4 | 27 | PDB header:transferase Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: the solution structure of the brct domain from human2 polymerase reveals homology with the tdt brct domain
96 | c2qsiB_ |
| not modelled | 7.3 | 11 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg; PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009
97 | c1ps9A_ |
| not modelled | 7.3 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase
98 | c3k30B_ |
| not modelled | 7.2 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
99 | c2zqeA_ |
| not modelled | 7.1 | 14 | PDB header:dna binding protein Chain: A: PDB Molecule:muts2 protein; PDBTitle: crystal structure of the smr domain of thermus thermophilus muts2