18/01/2012 01:55:32 : INFO  : Run start: Wed Jan 18 01:55:31 GMT 2012
18/01/2012 01:55:36 : INFO  : Initialised job
18/01/2012 01:55:37 : INFO  : Renaming log file 'phyre2_20120118_015530.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b85969e74e69360e/phyre_20120118_015530.log'
18/01/2012 01:55:39 : INFO  : Initialised job:
Sequence
>batch____
MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLA
FPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIAT
MAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLL
DIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLL
MAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYLTLTDDFNKLMVEADTCLYRSKKD
GRNRTSTMRYGEEVV

18/01/2012 01:55:40 : INFO  : Checked sequence
18/01/2012 01:55:43 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 01:55:44 : INFO  : PSI-BLAST 3 iterations
18/01/2012 01:57:56 : INFO  : PSI-BLAST 5 iterations
18/01/2012 02:01:09 : INFO  : Finished PSI-BLAST
18/01/2012 02:01:10 : INFO  : Running Buildali to generate a3m file
18/01/2012 05:42:02 : INFO  : Converting to HMM
18/01/2012 05:42:14 : INFO  : Calibrating HMM
18/01/2012 05:42:29 : INFO  : Searching HMM database
18/01/2012 05:49:29 : INFO  : Finished buildali
18/01/2012 05:49:31 : INFO  : Predicting secondary structure
18/01/2012 05:49:38 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 05:49:39 : INFO  : Predicting Disordered regions
18/01/2012 05:49:42 : INFO  : Predicted Disorder (Disopred)
18/01/2012 05:49:44 : INFO  : Running memsat_svm check
18/01/2012 05:51:48 : INFO  : Globular protein
18/01/2012 05:51:49 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b85969e74e69360e'
18/01/2012 05:51:50 : INFO  : Initialising fold library search
18/01/2012 05:51:53 : INFO  : Initialised search input
18/01/2012 05:51:55 : INFO  : Building Ensemble models
18/01/2012 05:51:59 : INFO  : Building hh.c1w25B_.model.1.pdb
18/01/2012 05:52:13 : INFO  : Building hh.c3ezuA_.model.2.pdb
18/01/2012 05:52:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b85969e74e69360e/hh.c3ezuA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b85969e74e69360e/c3ezuA_.2.pdb
18/01/2012 05:52:28 : INFO  : Building c1w25B_.1.pdb
18/01/2012 05:52:40 : INFO  : Building c3ezuA_.2.pdb
18/01/2012 05:52:56 : INFO  : Building c3breA_.3.pdb
18/01/2012 05:53:08 : INFO  : Building c3i5aA_.4.pdb
18/01/2012 05:53:21 : INFO  : Building c3hvaA_.5.pdb
18/01/2012 05:53:33 : INFO  : Building c3i5cA_.6.pdb
18/01/2012 05:53:47 : INFO  : Building c3ignA_.7.pdb
18/01/2012 05:53:59 : INFO  : Building c3i5bA_.8.pdb
18/01/2012 05:54:12 : INFO  : Building c3iclA_.9.pdb
18/01/2012 05:54:25 : INFO  : Building d1w25a3.10.pdb
18/01/2012 05:54:39 : INFO  : Building c3mtkA_.11.pdb
18/01/2012 05:54:51 : INFO  : Building c3qyyB_.12.pdb
18/01/2012 05:55:03 : INFO  : Building c3pjwA_.13.pdb
18/01/2012 05:55:16 : INFO  : Building c3hvwA_.14.pdb
18/01/2012 05:55:29 : INFO  : Building c3gfzB_.15.pdb
18/01/2012 05:55:42 : INFO  : Building c3p7nB_.16.pdb
18/01/2012 05:55:56 : INFO  : Building c2qv6D_.17.pdb
18/01/2012 05:56:10 : INFO  : Building c1wc6B_.18.pdb
18/01/2012 05:56:24 : INFO  : Building d1wc1a_.19.pdb
18/01/2012 05:56:37 : INFO  : Building d1azsa_.20.pdb
18/01/2012 05:57:13 : INFO  : Finished HH model building
18/01/2012 05:57:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 05:58:13 : INFO  : html domain output complete ID 'b85969e74e69360e'
18/01/2012 06:26:04 : INFO  : Run end  : Wed Jan 18 06:26:03 GMT 2012
