BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (410 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobact... 854 0.0 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 451 e-125 UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 T... 426 e-117 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 182 2e-44 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 152 3e-35 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 150 8e-35 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 149 1e-34 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 149 2e-34 UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 2e-34 UniRef50_B6IY91 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 147 9e-34 UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 146 1e-33 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 145 2e-33 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 143 9e-33 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 143 1e-32 UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 143 1e-32 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 143 1e-32 UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 T... 142 3e-32 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 142 3e-32 UniRef50_A1U3B3 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 142 3e-32 UniRef50_B7VMS0 Sensory transduction/ GGDEF family protein n=2 T... 142 3e-32 UniRef50_A1WTU4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 141 5e-32 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 140 7e-32 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 140 7e-32 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 140 1e-31 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 1e-31 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 140 1e-31 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 139 2e-31 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 139 2e-31 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 139 2e-31 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 139 2e-31 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 139 2e-31 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 139 3e-31 UniRef50_Q3SFG4 Putative diguanylate cyclase (GGDEF domain) n=1 ... 138 3e-31 UniRef50_Q7MRX3 Putative uncharacterized protein n=1 Tax=Wolinel... 138 3e-31 UniRef50_A8V293 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 138 3e-31 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 138 3e-31 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 138 5e-31 UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 138 5e-31 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 137 6e-31 UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 T... 137 6e-31 UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense R... 137 1e-30 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 136 1e-30 UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 T... 136 1e-30 UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 135 3e-30 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 135 3e-30 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 135 3e-30 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 135 4e-30 UniRef50_Q2BLT8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 135 4e-30 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 134 4e-30 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 134 5e-30 UniRef50_Q3SHI0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 134 5e-30 UniRef50_C6DEX8 Diguanylate cyclase n=13 Tax=Enterobacteriaceae ... 134 6e-30 UniRef50_B6BL86 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 134 6e-30 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 134 6e-30 UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with... 133 1e-29 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 133 1e-29 UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteob... 133 1e-29 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 133 1e-29 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 133 1e-29 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 133 2e-29 UniRef50_A0LBU1 Response regulator receiver modulated diguanylat... 132 2e-29 UniRef50_A9NHU3 Putative signalling protein n=1 Tax=Acholeplasma... 132 2e-29 UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caes... 132 2e-29 UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 132 2e-29 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 132 2e-29 UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 132 2e-29 UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 132 2e-29 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 132 2e-29 UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 2e-29 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 132 2e-29 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 132 2e-29 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 132 3e-29 UniRef50_C0QT05 Diguanylate cyclase n=1 Tax=Persephonella marina... 132 3e-29 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 132 3e-29 UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 132 3e-29 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 131 4e-29 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 131 4e-29 UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 131 5e-29 UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=S... 131 5e-29 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 131 5e-29 UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 131 5e-29 UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=... 131 5e-29 UniRef50_C7I2H1 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 130 6e-29 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 130 6e-29 UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 130 6e-29 UniRef50_A8TIT4 Putative uncharacterized protein n=1 Tax=alpha p... 130 7e-29 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 130 7e-29 UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 130 8e-29 UniRef50_B0K6G6 Diguanylate cyclase and metal dependent phosphoh... 130 8e-29 UniRef50_C8X2Z9 Diguanylate cyclase with PAS/PAC and GAF sensors... 130 8e-29 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 130 9e-29 UniRef50_B1YHF2 Diguanylate cyclase n=1 Tax=Exiguobacterium sibi... 130 1e-28 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 130 1e-28 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 130 1e-28 UniRef50_B8E8E4 Diguanylate cyclase n=3 Tax=Shewanella baltica R... 130 1e-28 UniRef50_C5V0N5 Diguanylate cyclase n=2 Tax=Gallionella ferrugin... 129 2e-28 UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH3... 129 2e-28 UniRef50_Q2BQ31 PAS/PAC sensor hybrid histidine kinase n=1 Tax=N... 129 2e-28 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 129 2e-28 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 129 2e-28 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 129 3e-28 UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 129 3e-28 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 129 3e-28 UniRef50_A5L069 Sensory transduction/ GGDEF family protein n=2 T... 129 3e-28 UniRef50_A8FUM2 Putative uncharacterized protein n=1 Tax=Shewane... 128 3e-28 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 128 3e-28 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 128 3e-28 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 128 3e-28 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 128 3e-28 UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 128 3e-28 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 128 4e-28 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 128 4e-28 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 128 4e-28 UniRef50_C1SNU0 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 128 4e-28 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 128 4e-28 UniRef50_UPI0001B57A43 diguanylate cyclase n=1 Tax=Streptomyces ... 128 4e-28 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 128 4e-28 UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 128 4e-28 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 128 4e-28 UniRef50_A3QHE1 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 128 5e-28 UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pel... 128 5e-28 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 6e-28 UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9... 127 6e-28 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 6e-28 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 127 6e-28 UniRef50_C1CZJ2 Putative regulator protein, GGDEF domain; putati... 127 7e-28 UniRef50_B3E5T6 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 127 8e-28 UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillu... 127 9e-28 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 127 9e-28 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 127 1e-27 UniRef50_B9QV28 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 127 1e-27 UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms R... 127 1e-27 UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 1e-27 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 126 1e-27 UniRef50_B6BNR7 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 126 1e-27 UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 126 1e-27 UniRef50_A4JR79 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=... 126 1e-27 UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 126 1e-27 UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 126 1e-27 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 126 1e-27 UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae ... 126 1e-27 UniRef50_A6F6C4 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 126 1e-27 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 126 1e-27 UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicol... 126 2e-27 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 126 2e-27 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 126 2e-27 UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella av... 126 2e-27 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 126 2e-27 UniRef50_A6C9P7 Probable response regulatory protein n=1 Tax=Pla... 126 2e-27 UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 125 2e-27 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 125 2e-27 UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 125 2e-27 UniRef50_B9LA95 Diguanylate cyclase n=1 Tax=Nautilia profundicol... 125 2e-27 UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petrolei... 125 3e-27 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 125 3e-27 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 125 3e-27 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 125 3e-27 UniRef50_C6HXZ0 Diguanylate cyclase n=1 Tax=Leptospirillum ferro... 125 3e-27 UniRef50_B6ER50 Putative GGDEF protein n=1 Tax=Aliivibrio salmon... 125 3e-27 UniRef50_A9DAY4 Periplasmic sensor diguanylate cyclase n=1 Tax=H... 125 3e-27 UniRef50_A1TTA7 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 125 4e-27 UniRef50_Q2L1W8 Putative signaling protein n=1 Tax=Bordetella av... 125 4e-27 UniRef50_B3E7P2 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 125 4e-27 UniRef50_Q1Z3E3 Putative uncharacterized protein n=2 Tax=Photoba... 125 4e-27 UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma p... 125 4e-27 UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain prot... 125 4e-27 UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydroge... 125 4e-27 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 124 4e-27 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 124 4e-27 UniRef50_C1SNT9 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 124 5e-27 UniRef50_B6BIP1 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 124 5e-27 UniRef50_A0NWC5 Sensory box/response regulator n=1 Tax=Labrenzia... 124 5e-27 UniRef50_A6W233 Diguanylate cyclase n=2 Tax=Gammaproteobacteria ... 124 5e-27 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 5e-27 UniRef50_Q488E6 GGDEF domain protein n=1 Tax=Colwellia psychrery... 124 5e-27 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 124 5e-27 UniRef50_A1TGQ8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 5e-27 UniRef50_Q7UR09 Probable response regulatory protein n=1 Tax=Rho... 124 6e-27 UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8... 124 7e-27 UniRef50_Q7MSI2 Putative uncharacterized protein n=1 Tax=Wolinel... 124 7e-27 UniRef50_Q1JYF1 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 124 7e-27 UniRef50_A1T013 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 7e-27 UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 124 7e-27 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 124 8e-27 UniRef50_D0IUU3 Diguanylate cyclase n=4 Tax=Comamonas testostero... 124 8e-27 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 124 8e-27 UniRef50_A0Y2V2 GGDEF family protein n=3 Tax=Alteromonadales Rep... 124 8e-27 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 124 8e-27 UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 124 8e-27 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 9e-27 UniRef50_B8IFL7 Diguanylate cyclase n=1 Tax=Methylobacterium nod... 124 9e-27 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 9e-27 UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 124 9e-27 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 124 9e-27 UniRef50_C9PKD3 Diguanylate cyclase n=1 Tax=Vibrio furnissii CIP... 123 1e-26 UniRef50_A5P717 Response regulator n=1 Tax=Erythrobacter sp. SD-... 123 1e-26 UniRef50_B7X0J9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_Q3SF49 Putative diguanylate cyclase (GGDEF domain) with... 123 1e-26 UniRef50_Q6AJQ0 Putative uncharacterized protein n=1 Tax=Desulfo... 123 1e-26 UniRef50_A1WWL1 Diguanylate cyclase n=2 Tax=Halorhodospira halop... 123 1e-26 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 123 1e-26 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 123 1e-26 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 123 1e-26 UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 ... 123 1e-26 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 123 1e-26 UniRef50_B9L7P4 Diguanylate cyclase/phosphodiesterase domain 1 n... 123 1e-26 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 123 1e-26 UniRef50_A8FSE2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 123 1e-26 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 123 1e-26 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 123 1e-26 UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 123 2e-26 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 123 2e-26 UniRef50_UPI0001AEC495 diguanylate cyclase n=1 Tax=Alteromonas m... 123 2e-26 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 123 2e-26 UniRef50_C6MHA0 Periplasmic/7TM domain sensor diguanylate cyclas... 122 2e-26 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 122 2e-26 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 122 2e-26 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 122 2e-26 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 122 2e-26 UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butz... 122 2e-26 UniRef50_A6Q8K7 Signal transduction response regulator n=1 Tax=S... 122 2e-26 UniRef50_B3QI56 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 122 2e-26 UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 122 2e-26 UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 122 2e-26 UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleod... 122 2e-26 UniRef50_Q21GB7 Response regulator receiver modulated diguanylat... 122 2e-26 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 2e-26 UniRef50_C0GRX7 Diguanylate cyclase n=1 Tax=Desulfonatronospira ... 122 2e-26 UniRef50_A3J836 Putative diguanylate cyclase (GGDEF domain) n=1 ... 122 2e-26 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 122 2e-26 UniRef50_UPI0001AEB9E1 diguanylate cyclase n=1 Tax=Alteromonas m... 122 3e-26 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 122 3e-26 UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frank... 122 3e-26 UniRef50_Q2SLT6 Predicted signal transduction protein containing... 122 3e-26 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 122 3e-26 UniRef50_A9CTZ9 Putative uncharacterized protein n=1 Tax=Hoeflea... 122 3e-26 UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=N... 122 3e-26 UniRef50_Q2LX62 Ggdef family protein / response regulator receiv... 122 3e-26 UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 3e-26 UniRef50_A4GA83 Putative uncharacterized protein n=1 Tax=Hermini... 121 4e-26 UniRef50_Q5E0N3 GGDEF domain protein n=3 Tax=Aliivibrio RepID=Q5... 121 4e-26 UniRef50_B5IMB7 Diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 70... 121 4e-26 UniRef50_A6T3M4 Diguanylate cyclase n=2 Tax=Oxalobacteraceae Rep... 121 4e-26 UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase wit... 121 4e-26 UniRef50_B2TGJ2 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 121 4e-26 UniRef50_C4XGF2 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 121 4e-26 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 121 4e-26 UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitrati... 121 5e-26 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 121 5e-26 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 121 5e-26 >UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobacteriaceae RepID=YDAM_ECOLI Length = 410 Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/410 (100%), Positives = 410/410 (100%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK Sbjct: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS Sbjct: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN Sbjct: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT Sbjct: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND Sbjct: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA Sbjct: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA Sbjct: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/414 (53%), Positives = 286/414 (69%), Gaps = 4/414 (0%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ + L++L++PVW+V P ++L++AN A+ + D +R G +S +Q++L Sbjct: 18 MLIAYLDALNILSTPVWVVMPKNQELLFANKEARKIAGDCQLPLMRNGRFSAHAQQQLDA 77 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR- 119 YL L I+EI T+Q LSCRL L ++ VI+FEG+ + + + Sbjct: 78 YLPALAGDDQIVEIWTIQSAGNIFPLSCRLSLTQIEPYGDVIVFEGLYIAENVLTQPNMG 137 Query: 120 ---SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 S Y+R +QGFY + F TN+APMLLIDP R+GQIVDAN AA FYGY+ + MC KHT Sbjct: 138 QLCSKPYRRDEQGFYEQLFNTNTAPMLLIDPLREGQIVDANQAATRFYGYSRDEMCMKHT 197 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 WEIN +GR V+P+M+E++ LPGGHKPLNF+HKLADG+TRHVQTYAGP+E+ G +LMLCI+ Sbjct: 198 WEINTMGRDVLPVMNEVARLPGGHKPLNFIHKLADGNTRHVQTYAGPVELDGVRLMLCII 257 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 HDITEQKRLE+ LEHAA D +T L NRRQF+ + E Q +SL+L+D D FK Sbjct: 258 HDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHAHAQSQRYGHCFSLILLDVDHFK 317 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 IND GH+KGDEVL LARTLES R+ D VFRWGGEEF +LLP T L+ AL LAE+IR Sbjct: 318 SINDQLGHNKGDEVLILLARTLESIIRESDSVFRWGGEEFTILLPLTHLEGALQLAESIR 377 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ + LP+ TVSIGVA H+ E D LFKR+D+ALYRAK GRNRVLAA Sbjct: 378 ETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEALYRAKASGRNRVLAA 431 >UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5XX83_KLEP3 Length = 418 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/407 (50%), Positives = 280/407 (68%), Gaps = 7/407 (1%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ D+L++P+W+V PF E ++YAN A++ L D++ ++R G YS + +L Sbjct: 1 MLLKELAVFDVLSTPIWVVHPFTESVVYANPASRTLSGDMSLKEMRNGIYSTCPETQLQH 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YL L +I E+ T+Q + ++ C+ L ++ +++FE ++ A + S Sbjct: 61 YLRYLDTMTEIFEVWTLQTGKGLQSVYCKTTLVDTDDSGTLLLFEAVKLLAQNQSIHTGS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 YQR+ GF+ARFF+TN+APMLLIDPS+DG+IVDAN+AAL FY Y+ E M KHTW+IN Sbjct: 121 RRYQRRNNGFFARFFMTNTAPMLLIDPSKDGRIVDANIAALRFYHYSDEEMRNKHTWQIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 LGR V+PIM+ I+++PGGHKPLNF H LADG+ RHVQTYAGP+ +Y +LMLCI+HDIT Sbjct: 181 TLGRDVIPIMNNIANMPGGHKPLNFTHILADGTLRHVQTYAGPVVLYNIRLMLCIIHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ L+++LE +A HD +TGLLNRR+FY + E IAQ + LLLID D FK IND Sbjct: 241 EEVHLKKELEFSAAHDPLTGLLNRREFYRLVEAPSF----IAQGFCLLLIDIDHFKSIND 296 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 ++GH KGDEVL ++R LE+ + D ++RWGGEEF+L LP +P+ AL LAE IR +V+ Sbjct: 297 IHGHQKGDEVLLVISRILETSVDREDKIYRWGGEEFLLFLPHSPIARALILAEGIRQAVS 356 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + TVSIGVA H E+ID+LF RVD ALY AKN GRNRV Sbjct: 357 EYQTLSV---TVSIGVAEHHDGEAIDQLFSRVDKALYVAKNGGRNRV 400 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 178/317 (56%), Gaps = 13/317 (4%) Query: 97 ETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDA 156 ET + EG T ++A R +R+KQ Y F N + MLL+DP R G+IVDA Sbjct: 662 ETGRAVAKEGTFRDITQRIEADRLLR-EREKQ--YRALFENNHSIMLLMDP-RTGRIVDA 717 Query: 157 NLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGST 214 N AA++FYGY +T+ +IN + I E+ K F+H+ LADG Sbjct: 718 NPAAVHFYGYPADTLRSMPFSDIN--AQDETAIFKEMVD-SRREKRSYFIHRHRLADGDI 774 Query: 215 RHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 R V+ Y+GPI + G++L+ ++HDITE+ RLE +++ A D++TG NR +F+ + E Sbjct: 775 RDVEVYSGPIMVQGNQLLYSVIHDITERVRLEREMKRLATTDSLTGAANRHEFFRLAELE 834 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + + ++L++D D FK IND +GH GD VL AL+ + + R D+ R GGE Sbjct: 835 LRRAMRYGHSLAVLMLDIDYFKSINDTHGHQTGDAVLKALSALVRTTLRDTDIFGRLGGE 894 Query: 335 EFVLLLPRTPLDTALSLAETIR--VSVAKVSISGLP-RFTVSIGVAHHEGNES-IDELFK 390 EF +LP T L + +A+ +R + KV + + FTVSIG+ +E ID+ Sbjct: 895 EFAAVLPETDLAGGVLVADRLRRELGALKVRLRDIEVMFTVSIGLTETRKSERLIDDAIN 954 Query: 391 RVDDALYRAKNDGRNRV 407 R D+A+Y+AK GRNRV Sbjct: 955 RADEAMYKAKRMGRNRV 971 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 148/286 (51%), Gaps = 35/286 (12%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMC-------------QKHT--WEINMLGRRV 186 +LL+D DG I AN A +GY E M Q+H E + R Sbjct: 31 VLLVDG--DGAIRQANAKAGTLFGYGAEEMVGLSIETLVPEGDRQRHGELRETYLAAPRE 88 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 P+ G + L +H+ G V+ P+++ G ++++ D++ +K LE Sbjct: 89 RPM--------GAGRELQALHR--SGEVIPVEIALVPVDVAGTRMVMVSAIDLSVRKALE 138 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHI----TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 QL H A+HD +TGL+NR F + E GQ ++L+++D D FK +ND Y Sbjct: 139 AQLHHQANHDPLTGLVNRYHFEELLAREIERGQR----YGGGFALIMLDIDHFKAVNDTY 194 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH +GD+VL A L R D + RWGGEEF+LLLP T + A +LAE IRV+V Sbjct: 195 GHLEGDKVLRRFAEELTGKIRAADTLARWGGEEFMLLLPGTDIAGARALAEAIRVAVNGC 254 Query: 363 SISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + + TVS+GV + ES+ L KRVD+ALY AK GR++V+ Sbjct: 255 RMPVPGQVTVSLGVTGYRNGESVWGLLKRVDEALYAAKLAGRDQVV 300 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 1/182 (0%) Query: 227 YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 YGD+ + ++ DITE++ + QLEH HD +TG+ NR F E +H +S Sbjct: 431 YGDQYVSVLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFS 490 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 + +D D FK IND YGH GD VL +LA+ + S R D+ R GGEEFV+++P T L+ Sbjct: 491 MAFMDIDHFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLE 550 Query: 347 TALSLAETIRVSVAKVSISGLP-RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 AL ++E IR +V +S +P + T+S+G+ +++ +KR D+ALY+AK +GRN Sbjct: 551 NALIISERIRSTVEGISSKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRN 610 Query: 406 RV 407 R+ Sbjct: 611 RI 612 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 18/290 (6%) Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN------MLGR 184 Y F + + L DP +G+ +D N A GY + E++ +G Sbjct: 695 YRLLFEAAADAIFLHDP--EGKFLDVNEVACRRLGYTRRELLAMTPRELDAEEFAEQVGE 752 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 R+ + E G H+ +G+ V+ +A ++ G ++L I DIT++KR Sbjct: 753 RIRRLREE------GSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVVLSIARDITDRKR 806 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 LE+ L A D +TG+ NRRQF+ E + + + ++L++D DRFK +ND +GH Sbjct: 807 LEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGH 866 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD VL + + R+ D++ R GGEEF +L T LD AL+ AE +R +V ++ + Sbjct: 867 HAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDV 926 Query: 365 --SGLP-RFTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 SG R TVSIG+A G+ ++D++ +R D ALY AK GRNRV+ A Sbjct: 927 PFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLA 976 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 19/279 (6%) Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH 200 P+L+ DP +G I N A GY+ + ++ RR + + G Sbjct: 154 PVLITDP--EGTITYVNAAFEELMGYSRSEVLGENP-------RRFKSGRQDDAFYQGMW 204 Query: 201 KPLN--------FVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + L F+++ DGS H++ P+ K+ + + D+T++ R+E+++ Sbjct: 205 RALERGESFRGEFLNRRRDGSLIHLEQTITPVLDDHGKISHYVALGKDVTDRLRMEDEIR 264 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 AH D +TG+ NR + E + + SL++ D D FK +ND YGH GDEV Sbjct: 265 RVAHTDWLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHFKAVNDQYGHEAGDEV 324 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRF 370 L ALA+T+ + R D + RWGGEEF++++P T L A +LAE +R +V+ +S+ G+P Sbjct: 325 LKALAQTVSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKLRQAVSTMSVPGVPGV 384 Query: 371 TVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 T S GVA +S L +R D+A+Y+AK GR+RV+A Sbjct: 385 TASFGVAELASGDSAKLLARRADEAMYQAKQAGRDRVVA 423 >UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVE0_DESAS Length = 738 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 165/300 (55%), Gaps = 14/300 (4%) Query: 119 RSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R+ ++K + R+ L+ + +++ DGQI+DANLAAL YGYN E + + Sbjct: 176 RNITERKKTEAILRRYQLLSENTRDIILFVRSDGQIIDANLAALQAYGYNSEDILTLNIQ 235 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 I R + I +++ +H+ DGST V+ + + G+++++ I+ Sbjct: 236 NIREKATRTL-INYQLREAVDKGIVFETIHQRKDGSTFPVEVSSKGALLEGEQIVVSIIR 294 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ---DYSLLLIDTDR 294 DI+E+K+ E Q++H A HD +T + NR Y++ E + +++A A+ +LLL+D D Sbjct: 295 DISERKKFELQIKHLATHDYLTNIPNR---YYLEESLK-RYVAKAKRGTTSALLLLDLDN 350 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK +ND GH GDE+L + L++ R+ DL+ R GG+EF +LL ++ A +AE Sbjct: 351 FKLVNDTKGHVAGDELLIIFTKILKANLREEDLLTRLGGDEFAVLLEGISINEATEIAEK 410 Query: 355 IRV-----SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +R ++A I+ TVSIG++ +G+ ++ + D ALY AK GRNRV+ Sbjct: 411 LRAVIDNQTIALSLINVRFNLTVSIGLSMVDGSMDPIQILSQADRALYIAKESGRNRVIT 470 >UniRef50_B6IY91 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IY91_RHOCS Length = 594 Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 87/180 (48%), Positives = 111/180 (61%), Gaps = 7/180 (3%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 ++ DITE+KRLE LE AA +D +TG+ NRR+F E + L + +SLLLID D Sbjct: 412 VLLDITERKRLEASLEQAALNDPLTGVWNRRRFEQALEEAAARALRYGRPFSLLLIDIDH 471 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK ND +GH+ GD L +A L +R+ D + RWGGEEF LLLP T +A +LA Sbjct: 472 FKQFNDTHGHALGDRALQMVAGVLAGRSRQVDCLARWGGEEFSLLLPETDAVSAQALASD 531 Query: 355 IRVSVAKVSIS-------GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +R +VA +SI+ G TVSIGV ESID LF+RVD ALYRAK GRN+V Sbjct: 532 LRRAVAALSIADVGPGDVGPGGVTVSIGVGQATPGESIDALFRRVDAALYRAKAAGRNQV 591 Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 7/166 (4%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F TN+AP+LLIDP RDG IVD N A FYG++ E H W+IN L R V+P+M EI Sbjct: 56 LFATNAAPILLIDPERDGAIVDVNPKAAEFYGHSRERFRTLHVWDINTLDRSVLPVMREI 115 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE--QKRLEEQLEH 251 S GGH P F H++ADGS R VQ YAGPI++ G +L+LCI+HD+T + L +L Sbjct: 116 SSWSGGHYPQRFRHRMADGSLRDVQVYAGPIQLQGRRLLLCIIHDVTAVIEAELFNRLLL 175 Query: 252 AAHHDAMTG--LLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 + D + G LL F + P +Q + + L+ RF Sbjct: 176 ESVQDGVCGVDLLGNVTFVN---PAAVQAFGYSHESELMRGGIGRF 218 >UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30U30_SULDN Length = 539 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 140/283 (49%), Gaps = 14/283 (4%) Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI------- 189 T+S+ ++L D D +I+ AN LNF GY+ +K+ I + ++ Sbjct: 258 TDSSFIVLTD---DKEIIYANETILNFTGYHSIEEFKKNNEYIFDVFEKIEDNSNFMQTC 314 Query: 190 ---MHEISHLPGGHKPLNF-VHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL 245 +H I +L N V DG R+ + YA I+ L L +IT + Sbjct: 315 NDGIHWIEYLIKEQNSKNLKVCIKKDGKYRYFKPYAKEIKTDDKVLYLITFDEITNEYVK 374 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 ++LEH A DA+T L NR + + E + S++ +D D FK +ND YGH Sbjct: 375 IKELEHMASTDALTKLFNRTKLNDVLEKEMALSRTVPSPLSVIFLDIDYFKAVNDTYGHD 434 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD VL +A + S R GD+ RWGGEEF+++L TP+ A L E +R V Sbjct: 435 AGDRVLINIANIITSSIRAGDIAARWGGEEFMIILQATPVSEASVLGEKLRARVEGHLFE 494 Query: 366 GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + + T+S+GV + ES + KRVD+ALY AK GRN+++ Sbjct: 495 TVGKITISLGVTEYINAESEESFIKRVDEALYEAKERGRNKII 537 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 143/311 (45%), Gaps = 16/311 (5%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 G T K S+ +Q K L NS + DG + N A+ G Sbjct: 357 GTAQDITQRYKTSKELEFQSK---------LLNSVTESIFVHDLDGNFIYLNEASYITRG 407 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEIS------HLPGGHKP-LNFVHKLADGSTRHVQ 218 Y M E++ + ++E + L K L H+ DG ++ Sbjct: 408 YTKSEMLGMKVQELDYSDEKNSAEIYEENLANLQEQLSKKEKAVLEVSHRTKDGKILPIE 467 Query: 219 TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 I+ ++ I DI+E K + + LE A+ D +TG+ NRR+F I + + Sbjct: 468 ITCKLIKEKDKSYIISIARDISELKAMNKTLEKMANTDNLTGIYNRRKFEEIIKIEMERS 527 Query: 279 LAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVL 338 + SL++ID D FK IND YGH +GD V+ + R D+ RWGGEEF++ Sbjct: 528 ARYNSNLSLIMIDIDHFKRINDTYGHDEGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIV 587 Query: 339 LLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYR 398 L P+T A LAE +RV++ V+ L + T S GV + +E KR+D ALY Sbjct: 588 LCPQTESKNASILAEKLRVAIESVNYETLGKITCSFGVTSYIKDEDKSSFIKRLDTALYS 647 Query: 399 AKNDGRNRVLA 409 AK++GRNRV+A Sbjct: 648 AKDEGRNRVVA 658 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 28/316 (8%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A ATL K + + + + + F +++PM+LIDP G +VD N AA FYGY Sbjct: 353 ANATLEEKVATRTRELQISEARFRQMFEHHASPMMLIDP-LGGAVVDVNQAAAEFYGYRI 411 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP--LNFVHKLADGSTRHVQTYAGPIEI 226 M + +IN+ E P K F H+LA G R V+ ++ P+E+ Sbjct: 412 AEMQAMNIAQINL--------QTEEDCRPQQTKGNCFFFSHQLASGEVRLVEVHSSPVEV 463 Query: 227 YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 L+ IVHDITE++ LEE++ A +D +T L NRR E + + Sbjct: 464 DSRPLLFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSA 523 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP----- 341 L+ +D D FK +NDL+GH GD++L +A + C R+ D R+GG+EFV+++ Sbjct: 524 LMFLDLDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSEN 583 Query: 342 -RTPLDTALSLAETIRVSVAKVSISGLPR--------FTVSIGVA-HHEGNESIDELFKR 391 ++ A S+AE IR ++A + L R + SIGV + E++++L K Sbjct: 584 LSDAVNQADSVAEKIRCALAAPYL--LKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKW 641 Query: 392 VDDALYRAKNDGRNRV 407 D A+Y AK+ GRN + Sbjct: 642 TDMAMYHAKDAGRNVI 657 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 9/276 (3%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK 201 +++ID +G++ N AA GY+ E + K + R+ E Sbjct: 419 IIMIDD--NGKVTFWNPAAERILGYSKEEIIGKDLHMFMIQDMRLYEAYREAFKKFRLTG 476 Query: 202 PLNFVHKLADGSTRH-------VQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 + V K + TRH V+ + I + I+ DI+E+KR EE L + Sbjct: 477 KGSVVGKTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFEELLYRQSI 536 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D +T + NRR F + E + + +SL++ D D FK++ND +GH+ GD VL ++ Sbjct: 537 TDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSV 596 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 A T++ RK D RWGGEEF++LLP T L+ A LAE +R +++ + G+ + T S Sbjct: 597 ADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETELDGIGKVTASF 656 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 GV + +++D + RVD ALY AK GRN V A Sbjct: 657 GVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 +K++ + F + M+LIDP + G+I+DAN AA NFYGY+ ETM Q + + Sbjct: 156 KKREELFRNMFENHDIAMILIDP-QAGRIIDANKAACNFYGYSRETMLQMDIEAVIGVST 214 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 + L G P +LA+G + V+ Y+ P++ G LM IV DITEQ + Sbjct: 215 TIDGGQKCSEALKKGCNPCICFQRLANGEEKLVEIYSSPVDYQGKTLMHLIVFDITEQWK 274 Query: 245 LEEQLE 250 + +LE Sbjct: 275 AKRELE 280 >UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RR7_SULDN Length = 427 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 8/215 (3%) Query: 199 GHKPLN--FVHKLADGSTRHVQTYAGPI-EIYGDKLML-CIVHDITEQKRLEEQLEHAAH 254 KP N +K + + +Q+ PI +++G+ L + HDIT +K L E Sbjct: 216 NKKPWNGELKYKTSKNQEKWLQSRVVPILDLHGEVHELNAVYHDITNEKLLAE----LYI 271 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D++T L NR F D+ L+L+D D FK IND YGH GDEVL A+ Sbjct: 272 TDSLTKLYNRAYFDETINMIVKHQRKADSDFILVLVDIDHFKLINDTYGHQVGDEVLVAI 331 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 A+TL+ R DL+ RWGGEEFV++L L+ A ++ E +RV++ I + T S Sbjct: 332 AKTLKGSLRDNDLIARWGGEEFVIMLKNITLNEAKTIIEKVRVNIQNSIIRDNIKVTASF 391 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 G+ + NE E+FKR DDALY AK DGRNRV+ Sbjct: 392 GLTKYIINEDSKEIFKRADDALYEAKKDGRNRVVV 426 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 4/205 (1%) Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQ 266 H+ DGS V+ G KL+ C DITE+KR +E++ + A DA+TG++NR + Sbjct: 26 HRRKDGSDITVEITTNAAYYKGVKLIFCNCRDITERKRDQERIRYLATTDALTGIMNRGE 85 Query: 267 F-YHITEPGQMQHLA-IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 F H+T+ +++ A + ++++ D D FK +ND YGH GDEVL + + R+ Sbjct: 86 FTRHLTK--EIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAIRR 143 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNES 384 D+ RWGGEEF+LLLP T L A+ AE +R ++A+ R T S GV + Sbjct: 144 VDVHARWGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFKQPERVTASFGVTTLGPRDR 203 Query: 385 IDELFKRVDDALYRAKNDGRNRVLA 409 D L KR DDALY AK+ GRNRV A Sbjct: 204 FDVLIKRADDALYLAKHAGRNRVEA 228 >UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC6_9PROT Length = 396 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 103/178 (57%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 L IV DI+++K E+L A+ D +TG+ NRR+F I + ++ + S L D Sbjct: 218 FLTIVTDISKEKSNHEKLSKLAYFDNLTGIYNRRKFDEILKIETIRVHRYKRKLSALFFD 277 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK++ND YGH GDEVL ++ ++ R D RWGGEEF+LLLP T + A + Sbjct: 278 IDHFKNVNDTYGHDTGDEVLKKMSNIIQLHTRDTDYFARWGGEEFILLLPETNVLEANLM 337 Query: 352 AETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 AE IR ++ + + T+SIGV+ + E KR+D ALY+AKNDGRNR + Sbjct: 338 AEKIRKTIFSYDFNKVGNLTISIGVSELKEKERSSTFLKRLDKALYKAKNDGRNRTIV 395 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/170 (48%), Positives = 108/170 (63%), Gaps = 12/170 (7%) Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ--DYSLLLIDTDRFKHINDLYGHSK 306 L+ A D+MT L NRR F I+ ++ HL+ + + S+L+ID DRFK +ND YGH Sbjct: 394 LKLLASTDSMTKLYNRRYFTEIS--AKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQF 451 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL AL+R L RK D+V R+GGEEFV+LLP T L A ++A+ IR+ V +++ Sbjct: 452 GDEVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTMEA 511 Query: 367 LP-----RFTVSIGVAH--HEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 P +FT+SIGVA E + I KR DDALYRAKN GRNRV A Sbjct: 512 -PTNKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNRVCA 560 >UniRef50_A1U3B3 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U3B3_MARAV Length = 364 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 9/196 (4%) Query: 224 IEIYGDKLMLCIVHDITEQK------RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 I + ++ C + D + ++ RL + E+AA HDA+T L NRR+ E + Sbjct: 162 IIVLAFEMATCYILDQSRRRSKLGLIRLAAEFEYAAKHDALTSLANRREGLEQLETEYQR 221 Query: 278 HLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFV 337 +L + +S+LL+D D FK++ND YGH GD+++ +ARTL +RK D + RWGGEEF+ Sbjct: 222 YLRNGRSFSVLLMDIDLFKNVNDSYGHQAGDDMIVLVARTLTDQSRKVDTIARWGGEEFL 281 Query: 338 LLLPRTPLDTALSLAETIRVSVAKVSISGLPR---FTVSIGVAHHEGNESIDELFKRVDD 394 +LLP T L A + AE IR +VA +I + T+SIGVA +G+ESID L +R D+ Sbjct: 282 VLLPETALTEAAATAERIRSAVASQAIDCAGKRVTATISIGVACIQGSESIDRLLQRADE 341 Query: 395 ALYRAKNDGRNRVLAA 410 ALY+AK GRNRV A Sbjct: 342 ALYQAKTLGRNRVCQA 357 >UniRef50_B7VMS0 Sensory transduction/ GGDEF family protein n=2 Tax=Vibrio RepID=B7VMS0_VIBSL Length = 430 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DG R Y I G + + ++ D+T++ LE+QL H A++D MT LLNRR Y Sbjct: 223 DGVHRFFNIYDNAITWKGQRAVQVVLEDVTQKVMLEKQLVHQANYDEMTDLLNRRAIYEW 282 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK-GDLVF 329 +H+ +L+D D FK IND YGH GDEV+CALA + A K G + Sbjct: 283 LR----EHMFSKNYLVCMLLDIDDFKSINDTYGHMVGDEVICALASITKRNAEKVGGVAG 338 Query: 330 RWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV--SISGLPRF--TVSIGVAHHEGNE-- 383 RWGGEEF++ +P TPL+TAL ++E IR +V + RF +VSIG++ E Sbjct: 339 RWGGEEFIIFIPNTPLETALEVSEEIRQQFNQVEFKVGEQIRFNSSVSIGISDSRACEDG 398 Query: 384 -SIDELFKRVDDALYRAKNDGRNRV 407 +ID L D +LYRAK +G+N V Sbjct: 399 VTIDALVNLTDQSLYRAKANGKNCV 423 >UniRef50_A1WTU4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTU4_HALHL Length = 454 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 2/213 (0%) Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHH 255 G + + F + DG TR ++ I+ ++ ++ I DITEQ+ L +LE+ A H Sbjct: 237 GERREVEFRIQRPDGRTRDIRAVWQRIDDEHGRIQRLVGINEDITEQRELHSELEYRAAH 296 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +T L NR + + Q ++ +++LL D D FK +ND +GH+ GD VL +A Sbjct: 297 DPLTDLFNRAKIQQLLRAAQAAYIRHHTPFAVLLFDVDHFKQVNDRFGHATGDAVLWLMA 356 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIG 375 R +ES R+ D + RWGGEEF++L +T A LAE IR V + G+ T+S+G Sbjct: 357 RRIESVLRETDHMGRWGGEEFLILASQTDEAGAEVLAERIRHQVETTAFEGVGTVTISLG 416 Query: 376 VAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 VA E S++ L +R D ALY AK+ GRNR + Sbjct: 417 VAAAEPGTSLESLEQRADRALYAAKHRGRNRTV 449 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 6/283 (2%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 ++Q + R L + +++ ++ +I + NL A G + E + K +EI + Sbjct: 382 REQKEFLRLILDSMPAGVMVVDAKTFRIENVNLEAAAMIGASPEEIIGKSCFEIFPESKG 441 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY-GDKLMLCIVHDITEQKR 244 + I + + L H++ DGS V + G+KL+ + D+TE+K+ Sbjct: 442 LCLITAVGQEMDWAERIL---HRM-DGSQLPVLKIVKRLRTKSGEKLIETFI-DLTERKK 496 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 LEEQL + D +T NRR F + E + ++L+++D D FK++ND +GH Sbjct: 497 LEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGH 556 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 + GD VL LA +++ R+ D + RWGGEEFV+LLP TP++ A LAE +R ++ + I Sbjct: 557 AAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEI 616 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 G+ R T S GV + +++D L R D LY AK GRN V Sbjct: 617 PGVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRNCV 659 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 161/317 (50%), Gaps = 33/317 (10%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTN-SAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 + + L R+ + +++ R L +P L+ S++ +I+ N AA + +G Sbjct: 243 SVVDLTERRAMEEENRRKDEMLRLMLEGIPSPAWLV--SKEHRILAQNKAAASLFG---- 296 Query: 170 TMCQKHTWEINMLGRRVM-------------PIMHEISHLPGG------HKPLNFVHKLA 210 T + WE +LG + P++ + G + P+N + A Sbjct: 297 TKVGDYCWE-RVLGGEYLSDEYREALEKNGSPLLGTKCYFCRGDEALDKNAPINSEVEFA 355 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 G T+ P+ G+ + L D+T K++EE+L + D++T + NRR F Sbjct: 356 GGIW---DTWWIPL---GEDIYLHYATDVTRYKKMEEELRQLSVTDSLTNVYNRRYFVQK 409 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 E + +SL+++D DRFK IND +GH+ GD VL ++A +++ RK D + R Sbjct: 410 LEEEIERAKRAGSKFSLVMLDIDRFKSINDRFGHNAGDLVLKSMAEMIKNRIRKIDTLAR 469 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFK 390 WGGEEFV+LLP T ++ A+ L E +R S++++ I G+ R T S GV + ++ID L + Sbjct: 470 WGGEEFVMLLPETTVNKAVVLVEELRESLSQMDIPGVGRVTASFGVVGYCPGDTIDTLMQ 529 Query: 391 RVDDALYRAKNDGRNRV 407 RVD +Y AK GRN V Sbjct: 530 RVDALMYEAKAAGRNCV 546 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 6/206 (2%) Query: 208 KLADGSTR--HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRR 265 + DG+TR V T A P +++C+ DI+ +KRLE L+H A D +TG NRR Sbjct: 194 RCRDGTTRWAEVNTAALPPGAGDGAVLVCVFRDISARKRLESDLKHLATTDGLTGAYNRR 253 Query: 266 QFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKG 325 F + + A+ SLLL+D D FK +ND +GH+ GDEVL + T R Sbjct: 254 SFVEVCGQELQRADRRARPTSLLLMDIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSE 313 Query: 326 DLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGN 382 D+V R GG+EF +LLP T L+ A +AE +R + ++++ G FTVS GVA + + Sbjct: 314 DVVGRIGGDEFAVLLPATTLEQAGRVAEQLRTTYERLAVPARGGTATFTVSFGVAEWKPH 373 Query: 383 -ESIDELFKRVDDALYRAKNDGRNRV 407 +++EL +R D ALY AKN GRN V Sbjct: 374 LRTVEELLQRADRALYAAKNAGRNCV 399 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 13/317 (4%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAA 160 I F G +A L + Q+K Q RF AP+ ++ + DG+I+ N A Sbjct: 886 IEFAGRQARLVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAW 945 Query: 161 LNFYGYNHETMCQKHTWEINMLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHV 217 GY HE + W G R V ++ E+ + G + F + G TR Sbjct: 946 TELTGYTHEDIPTIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIW 1005 Query: 218 QTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + P+ D +L++ + DITE+K+ EEQL HAA HD +TGL NR E Sbjct: 1006 NFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQA- 1064 Query: 276 MQHLAIAQDY--SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGG 333 ++ + Y +LL ID DRFK +ND GH GD++L A+A L++C R D V R+GG Sbjct: 1065 IKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGG 1124 Query: 334 EEFVLLLPR-TPLDTALSLAETIRVSV-AKVSISGLPRF-TVSIGVAHHEG-NESIDELF 389 +EFV+LL T A +A+ I + + + G F +VSIG+ ES EL Sbjct: 1125 DEFVILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESASELL 1184 Query: 390 KRVDDALYRAKNDGRNR 406 + D A+YRAK GR R Sbjct: 1185 RNADIAMYRAKEKGRAR 1201 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 34/292 (11%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM----- 190 + NSA +I S + +I N AA +G + + +G+R+ ++ Sbjct: 143 VVNSAYDGIISVSSESRIELINTAACEMFGVDE-----------SYVGKRLETLLPLRFR 191 Query: 191 --HEISHLPGGHKPLNF--VHKLA-------DGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 HE + P+N +H A DGS + I + M I+ DI Sbjct: 192 SNHESYFRAFSNSPINSRPMHARASVMGLRRDGSEFPQEVTIAKINLGQTTEMTAILRDI 251 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 +E+ RL E+L+ AA D +TG+ NRR+F + + + SLLL+D D FK +N Sbjct: 252 SERARLVEELKVAATTDPLTGIANRRRFDELVKQEVQRCQRFGHTMSLLLLDIDHFKQVN 311 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D +GH +GD+ + +L R + R+ D++ RWGGEEF++LLP T LD A + AE IR+++ Sbjct: 312 DTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGEEFIILLPETSLDLAWASAERIRLAI 371 Query: 360 AKVSIS-----GLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 A S +P TVSIG++ +G +++D + +R D ALY AK GRN Sbjct: 372 ASESHPLGADIEIP-LTVSIGISASQGPQDNVDNMVRRADTALYLAKKQGRN 422 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 152/296 (51%), Gaps = 31/296 (10%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS- 194 L N A +I G I NL A +G + E+M +G+++ PI+ E Sbjct: 25 LANVAADAIITIDEHGTIQSFNLCAERMFGRSAESM----------IGQKLHPIIPERYR 74 Query: 195 --HLPGGHKPLNFVHKLADGSTR--HVQTYAG---PIEI-----YGDKLMLC---IVHDI 239 H G + DG TR H G PIE+ +G+ L I+ DI Sbjct: 75 RLHDDGVSRVSRSGETPFDGETREFHALRKDGSEFPIELTVASWFGEDRRLSFIGIIRDI 134 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 TE+KRLE +L A D +TG+LNRR+F +T + + +L+++D D FK IN Sbjct: 135 TERKRLEAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRIN 194 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D +GH+ GD V+ +LA S R+ D++ R GGEEF ++LP +L +AE +R V Sbjct: 195 DAFGHTVGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKV 254 Query: 360 AKVSIS----GLPRFTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + I+ + RFT S+GVA + ++S D L R D+ALYRAK DGRN V AA Sbjct: 255 EGLQITLNDGRIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGRNCVRAA 310 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 99/177 (55%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 + DITE+KR E+ L + A HD +TGL NRR E S++L D D Sbjct: 507 TVAEDITERKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFDLD 566 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK +ND +GH+ GD+VL LA + R D+V RWGGEEF+L+LP T A LAE Sbjct: 567 HFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQLAE 626 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R VA+ T+S+G A +E D LFKRVD ALY AK +GRNR AA Sbjct: 627 VLRAYVAEARFPIPDPVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRAQAA 683 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 20/181 (11%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 +G + A LG + + ++ G Y + F + A L+DP R+G +VD N AA F Sbjct: 247 LQGWDELARLGRTLDHLLDVEDERLGLYQQIFERHDAIQWLVDP-REGVLVDVNEAAARF 305 Query: 164 YGYNHETMCQKHTWEINMLG-RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAG 222 YG++ M +IN L V M + G K L F H+LA G R V+ ++G Sbjct: 306 YGFHRTEMRGMPVSKINQLSPEAVREAMARVQR--GEQKVLYFPHRLASGEIREVEVHSG 363 Query: 223 PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 +++ G + + I+HDITE++ L NRRQ I E Q +A+A Sbjct: 364 AVDVGGREYLHSIIHDITERRELAR---------------NRRQLVEILE-ASPQFIAMA 407 Query: 283 Q 283 + Sbjct: 408 E 408 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/187 (43%), Positives = 113/187 (60%), Gaps = 12/187 (6%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SL 287 ++ ++ DITEQKR+EE L A D +TG LNRR F + LA+AQ + ++ Sbjct: 310 LVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEAAR----RDLALAQRHGEPVTV 365 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 L D D FK +ND +GH+ GDE L T+ R D++ R GGEEF L+LP T L + Sbjct: 366 ALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILPHTALAS 425 Query: 348 ALSLAETIRVSVAKVSI---SGLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDG 403 A+ LA+ +R ++A + + SG FTVSIG+A +ID L + D+ALYRAK+ G Sbjct: 426 AMLLADRLRQTLANLRVPCPSGEVEFTVSIGLAELGTHGTTIDTLLQAADEALYRAKSAG 485 Query: 404 RNRVLAA 410 RNRV+AA Sbjct: 486 RNRVIAA 492 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 4/204 (1%) Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DG+ V+ ++ G + + DITE+K E +L A D++TGL NRR+F + Sbjct: 848 DGTRVSVERSVSSFQLGGRWYAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMEL 907 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 E M+ ++L++D D FK +ND +GH GDEVL LAR + R+ D++ R Sbjct: 908 AEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGR 967 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGN-ESID 386 GGEEF +LLP T A+ +A+ +R ++ K S+ +G R TVSIG A + E+++ Sbjct: 968 LGGEEFGVLLPETDAGPAMEVAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVE 1027 Query: 387 ELFKRVDDALYRAKNDGRNRVLAA 410 L KR D ALY AK GRN+V+A Sbjct: 1028 TLLKRADVALYEAKQSGRNKVVAG 1051 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/187 (42%), Positives = 105/187 (56%), Gaps = 5/187 (2%) Query: 222 GPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 G IE Y + + HDIT QK LE LEH A +D +T NR F + + + Sbjct: 606 GEIEYY-----IAMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRY 660 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 A SLLL+D D FK IND +GH GDEVL L L+ R+ D++ RWGGEEFV+LLP Sbjct: 661 AHPCSLLLLDIDHFKRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLP 720 Query: 342 RTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKN 401 T + +AE +R V + + T+S+GVA ESI + KR D+A+Y AK Sbjct: 721 GTDAERGQHVAEQLREQVTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAMYVAKK 780 Query: 402 DGRNRVL 408 GRNRV+ Sbjct: 781 GGRNRVV 787 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 145/288 (50%), Gaps = 11/288 (3%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI--NML 182 R+ + Y R N+A LL+ + DG ++D N G + E + ++ I + Sbjct: 523 RRSEERY-RALFDNAADGLLLYEA-DGTLIDVNETIARRLGESREAIVGRNVASIVEPEV 580 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 RV P + EI L GH VH+ A G +V+ +A IE G ++L DITE+ Sbjct: 581 LERVRPRLTEI--LETGHASFESVHRTAMGPV-NVEVHARRIEFEGRFVVLSSARDITER 637 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K LE L A D +TG+ NRRQF+ + L ++L++D D FK++NDLY Sbjct: 638 KNLEAALLREATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLY 697 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GDEVL A A R D+ R GGEEF LLP + A+ AE +R V + Sbjct: 698 GHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERR 757 Query: 363 SI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 S+ + TVS+GV + D++ +R D ALY AK+ GRNR Sbjct: 758 SVVYEGTALQCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNR 805 >UniRef50_Q3SFG4 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFG4_THIDA Length = 570 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/170 (45%), Positives = 101/170 (59%), Gaps = 6/170 (3%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 EQ+ EQL A D +TGL NRR FY +T L A S+LL+D D FK IND Sbjct: 393 EQQLRAEQL---AQLDPLTGLNNRRAFYGMTAAAWSNALRHAHATSVLLLDIDHFKQIND 449 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH++GD VL +A L+ R+GD++ RWGGEEF++ LP T L A LAE +RVS+A Sbjct: 450 RYGHAEGDAVLKTVAGALKQSVRQGDVLARWGGEEFIVFLPETGLRDAALLAERLRVSIA 509 Query: 361 KVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +S++ G T SIGVA + ++D L D L+ +K GRNRV Sbjct: 510 ALSVTGRVGTMAVTASIGVAERADHATLDSLIAAADACLFASKQQGRNRV 559 >UniRef50_Q7MRX3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRX3_WOLSU Length = 804 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 212 GSTR--HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYH 269 G TR H+Q A P E + +K++ I DITEQ +LE A++D++T + NR +F Sbjct: 605 GQTRMTHIQIKA-PDEWHEEKILFGICQDITEQI----ELEKIAYYDSLTQIYNRNKFNE 659 Query: 270 ITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVF 329 + Q SL++ D DRFK IND YGH GDEVL LA + R D+ Sbjct: 660 LITREIELLKRYKQPLSLVIFDIDRFKRINDTYGHRVGDEVLAELAGIVSREIRSTDIFV 719 Query: 330 RWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-FTVSIGVAHHEGNESIDEL 388 RWGGEEFV++ P+TP A LAE IR + + G+ T S GV + ESI+ Sbjct: 720 RWGGEEFVIVTPQTPTQGAQLLAEKIRSKIEEWKFEGVEECVTCSFGVTNILRLESIESA 779 Query: 389 FKRVDDALYRAKNDGRNRVLAA 410 +R D+ LY+AKN+GRN+V+ A Sbjct: 780 IERADELLYKAKNNGRNQVVMA 801 >UniRef50_A8V293 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V293_9AQUI Length = 393 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 26/291 (8%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI-----NMLGRRVMPIM 190 L S +++ +G+I N L F+ + + + K +E + G+ + ++ Sbjct: 113 LVESVNAIVLKWEANGKIKFINRYGLEFFKFKKDEIIGKSVFETIVPHTDKNGKDLYKMI 172 Query: 191 HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI-------YGDK----LMLCIVHDI 239 EIS P K +V Y I Y D +L I D Sbjct: 173 QEISINP---------EKYIYNENENVDKYGNRYWIVWRNKPVYDDDGNLIEILSIGSDY 223 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 T+QK+L+++L+ A D +TG+ NRR+F + + + + SLLLID D FK IN Sbjct: 224 TQQKKLKDRLKQLAETDELTGIYNRRKFMELLKKETEKSKRYNNNISLLLIDIDDFKKIN 283 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D YGH GD VL ++ + R+ D+ RWGGEEFV +L T L A L E I V Sbjct: 284 DTYGHEIGDFVLTLFSKLVSKNIRETDIFARWGGEEFV-ILTFTDLRNAKILGEKICNVV 342 Query: 360 AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + L + TVSIG+A ++ +E I+ R D +Y+AK G+N+V A Sbjct: 343 SNFKFDDLDKITVSIGIASYKKDEDINSFISRADKLMYKAKQSGKNKVATA 393 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 100/167 (59%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E KR E+LE+ A D +T L+NRR+ + E + + SL+L+D D FK +ND Sbjct: 193 ELKRANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVND 252 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 GH GDEV+ + + +RK D RWGGEEF+++ P+T D A++ AE +R+S+ Sbjct: 253 TRGHQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIE 312 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 S R + S GVA E E+I + KR D+ALYRAK++GRNRV Sbjct: 313 NTEFSSGVRVSASFGVASLETGETIQLVLKRADEALYRAKHNGRNRV 359 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 101/171 (59%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE+ R++E+L A+ D +T L NRR+ Y + + +L+L+D D FK Sbjct: 318 DITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKR 377 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND +GH GD VL +A + + R D++ R+GGEEFV+ P T +D A LAE IR Sbjct: 378 INDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRS 437 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 S+A S + T+S+G++ E + I+ L KR D ALY AK GRNRV+ Sbjct: 438 SIAMFSFPTVGAVTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZG2_SULD5 Length = 768 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 16/205 (7%) Query: 211 DGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 DGS V+T P E Y I DIT++KR+EE + D +TGL NR + Sbjct: 563 DGSAYWVETIIAPRYDEDYSLIGYTAIRTDITDKKRVEE----LSITDRLTGLYNRLKLD 618 Query: 269 HITEPGQMQHLAIAQ----DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 + HL+IA+ +S++L+D D+FK +ND YGH GD +L A +++ R Sbjct: 619 ELF----AHHLSIARRHHTPFSIILLDIDKFKSVNDTYGHQVGDTILQEFALCVKAQIRS 674 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVA-HHEGNE 383 D+ RWGGEEF+LLLP +PL+ A LAE +R+ VA S S + T S GVA HEG++ Sbjct: 675 EDIFGRWGGEEFLLLLPNSPLENASLLAEKLRLCVASFSFSQVGMKTASFGVATFHEGDD 734 Query: 384 SIDELFKRVDDALYRAKNDGRNRVL 408 + RVD+ALYRAK +GRN+V+ Sbjct: 735 E-KSMMVRVDEALYRAKENGRNQVV 758 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 2/205 (0%) Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 N K +GS + I + G +M+ HD+TE+K++EE+++ A D++TG+ N Sbjct: 872 NIPVKRKNGSIFLADISSAAIILDGRTIMVGFFHDVTERKKVEEEIKLLATTDSLTGIAN 931 Query: 264 RRQF-YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 RR F H+ + + SL++ D D FK +ND +GH GD+VL AL+ ++ Sbjct: 932 RRAFSTHLASELERSN-RYGTPLSLVMFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNI 990 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGN 382 R D+V RWGGEEF+LL+P + + A + E +R ++ + TVS G+ N Sbjct: 991 RAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREISDFPFGQVGSLTVSFGITVFVLN 1050 Query: 383 ESIDELFKRVDDALYRAKNDGRNRV 407 E KRVDDALY+AK GRNRV Sbjct: 1051 EDSKVFLKRVDDALYQAKEKGRNRV 1075 >UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGH7_9PROT Length = 428 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 15/275 (5%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP--IMHEISHLPGG 199 ++++ S +G I+D + F+GY + K+ ++L +P I E+ + Sbjct: 160 IMVMKTSVNGNIIDVSTLFCEFFGYEKNELIGKNP---SVLKSGKLPDLIYKELWNTITN 216 Query: 200 HKPLN--FVHKLADGSTRHVQTYAGPIEIYGDKLML---CIVHDITEQKRLEEQLEHAAH 254 +K + + G +R VQ+ PI + D +++ + DIT +K LE Sbjct: 217 NKSWTGEVENVTSSGESRWVQSRITPI-LDDDGVLMEFNAVYQDITNKKLLE----VLYV 271 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D +T + NR F + + ++ +L+ D D FK IND YGH GDE L + Sbjct: 272 TDPLTQIYNRTYFDELMTSIALHQRKADTNFIILITDIDHFKSINDTYGHQVGDEALKDV 331 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 AR ++ R+ D+V RWGGEEFV++L T LD A +AE +R ++ K I + T SI Sbjct: 332 ARVIKDSLRENDVVARWGGEEFVIMLKNTELDEAQMIAEKLRANIEKTKIQNVIDITTSI 391 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 G+ + E + FKR D+ALY+AK GRN V+ Sbjct: 392 GLTKYYVGEDTNLTFKRADNALYKAKESGRNMVVT 426 >UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZG0_9PROT Length = 392 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 4/174 (2%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 + E R E LEH A D +T +LNRR F+ + H + + +S+L++D DRFK I Sbjct: 213 LQEFTRSERTLEHLASVDPLTEVLNRRSFFAKAQGLWQSHQSDGRPFSVLMLDLDRFKAI 272 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND +GH GD V+ A AR L R DL+ R GGEEF ++LP AL +AE IR + Sbjct: 273 NDRHGHPTGDRVIVAFARLLRDAMRHDDLLGRMGGEEFAIILPGVATAQALEVAERIRAA 332 Query: 359 VAKVSI---SGL-PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 V + G R TVSIG+A +G S+D+L KR D ALY+AK+ GRNRV+ Sbjct: 333 SEAVEVLSDDGFRVRLTVSIGLALGDGATSLDDLMKRADAALYQAKDQGRNRVV 386 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 23/290 (7%) Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK--HTWEINMLGRRVMPIMHEI----- 193 P L+ RD +++ N A G E M + + + + G R +M + Sbjct: 131 PDALLAIDRDKRVIIWNKAVAKLTGIPPEAMLGRGDYAYTVPFYGERRPQLMDLVFQSDT 190 Query: 194 ------SHLPGGHKPL---NFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQ 242 +H+ L F + L DG + P+ +++ + I+ DIT+ Sbjct: 191 DLERRYAHVTREGDTLTAEGFCNALHDGHGAWILARVAPLRDAAGQVVGAMEIIRDITDS 250 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 KRLEE L D +T L NRR F+ + E + L +L +ID D FK +ND Y Sbjct: 251 KRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSVNDRY 310 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GD VLC +A+TL R+ D++ R+GGEEFV+LLP T L TA + E +RV+VA+ Sbjct: 311 GHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVAVAER 370 Query: 363 SI---SGLPRFTVSIG-VAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 I SG T+S+G VA +G +++ L D LYRAK GRNRV Sbjct: 371 RIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRV 420 >UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BII0_9PROT Length = 662 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 17/248 (6%) Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAG 222 F H+ K WEI + G+ + F+++ D + + + Sbjct: 428 FKSGKHDNAFYKEMWEIILSGKTYRGV---------------FINRKKDKNIFYEEETIT 472 Query: 223 PIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 PI + + DITE+ +E +L+ A D++TG+ NR + E + Sbjct: 473 PIFDSKKNIQNFVATSQDITERIEMENKLQKLATIDSLTGIYNRHKTNEEIEIQLAKAKR 532 Query: 281 IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL 340 ++++L++ D D FK +ND YGH GD++L + + R+ D RWGGEEF+LLL Sbjct: 533 YDEEFALVMFDIDHFKDVNDTYGHDAGDDILKEFSDVVLKHIRESDRFGRWGGEEFMLLL 592 Query: 341 PRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAK 400 P+ D A+ +A+ IR V++ + L R TVS+G + + N++ + L KR D+ALY+AK Sbjct: 593 PKVDKDEAIRVADKIREFVSRYPFNKLSRITVSVGASIYRENDTKESLLKRTDEALYQAK 652 Query: 401 NDGRNRVL 408 + GRNRV+ Sbjct: 653 SSGRNRVI 660 >UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACB8_ALHEH Length = 437 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 15/274 (5%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW-------EINMLGRRVMPIMHEIS 194 +L +D R +I+ N A L GY E + + T + G V P++ + Sbjct: 164 LLFLDGER--RILHCNPAFLRMTGYRAEEVLGRTTAFLYTSHTDYEATGEAVYPVLRQ-- 219 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKRLEEQLEHAA 253 G + ADG V P++ + + ++ DI+E+K L++ LE A Sbjct: 220 ---GRTSEIEREFVRADGEVITVSLLGRPLDPCDLSQGFVWVLQDISERKALQDALEREA 276 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D +TG LNRR+ + S+ L+D D FK +ND YGH+ GD VL Sbjct: 277 TFDQLTGALNRRRIEQALAREMERSNRHGDALSVALLDVDHFKRVNDQYGHNVGDRVLQT 336 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVS 373 L R + R DL+ RWGGEEF+++LP T +AL LAE +R +A+ + + TVS Sbjct: 337 LIRRCKENLRAVDLIGRWGGEEFLIVLPDTDRHSALQLAERLRARIAERARADTHGVTVS 396 Query: 374 IGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +G+A E +D+L KR DDALYRAK+ GRNRV Sbjct: 397 LGLASFRPGEGLDQLVKRADDALYRAKDRGRNRV 430 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 ++ DITEQ+ +++LEH + DA+TG+ NRR F+ E + SL++ D D Sbjct: 415 VLTDITEQENYKKELEHLSVTDALTGIGNRRYFHQKIEEEIHRAKRYQHPLSLIMFDIDF 474 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FKH+ND +GHS GDEVL + + S R+GD+ R GGEEF+++LP D A +AE Sbjct: 475 FKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEEFIIILPHALRDEAQKIAEK 534 Query: 355 IRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R + + +P T+S GV + E I+ +FKRVDDALY+AK GRN V+ Sbjct: 535 LRAKI-EFCQKVIP-ITMSFGVVEYIVGEEIEFIFKRVDDALYKAKESGRNIVVVG 588 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 8/184 (4%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----S 286 L+LCI+ DITE+ + + E + D +TG+ NRR E ++L +A+ Y S Sbjct: 722 LILCILQDITEESMIIKYFEELSIKDDLTGICNRR----CLEDKLEEYLTLAKRYNRPLS 777 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 +++ D D FKHIND YGH GD+VL +A + S R D++ R+GGEEFV++ P T L+ Sbjct: 778 VIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLE 837 Query: 347 TALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 A +LAE +R + T S GV ++ + + KRVD+ALY+AK +GRNR Sbjct: 838 DAKALAEKLRKEIENFLFEEGFSITCSFGVTSLNQEDTKETILKRVDEALYKAKREGRNR 897 Query: 407 VLAA 410 V+A+ Sbjct: 898 VVAS 901 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 9/145 (6%) Query: 121 ANYQRKKQG-FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 A Y K Q FY FF +S PMLL+DP I +AN AAL+FYGY E + +W+I Sbjct: 209 AIYTLKDQNEFYKTFFEGHSIPMLLVDPDT-YSIANANQAALDFYGYTKEEITTLKSWDI 267 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFV---HKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 N LG + M + IS +K LNF H+L G R V+ Y+ P+ + G +L IV Sbjct: 268 NTLGEKEMKEL--IS--KAKNKELNFFKFKHRLKSGEIRDVEVYSSPVYLGGKIYLLSIV 323 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGL 261 +D+T+++R ++ LE D+++ + Sbjct: 324 YDVTKEERAKKFLEILKEIDSLSNI 348 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 7/183 (3%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 ++ D+TE RL ++LE A D +TGL NRR F + + + S+++ID D Sbjct: 279 VMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDH 338 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARK-GDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK +ND YGH GD VL +A T++ R GD+ R+GGEEFVLLLP T + A LAE Sbjct: 339 FKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAE 398 Query: 354 TIRVSVAKVSIS---GLPRFTVSIGVA--HHEGNESIDELFKRVDDALYRAKNDGRNRV- 407 IRV+ + ++ G RFT S GV + + ID + KR DDALYRAK GRNRV Sbjct: 399 RIRVAFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNRVQ 458 Query: 408 LAA 410 LAA Sbjct: 459 LAA 461 >UniRef50_Q2BLT8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLT8_9GAMM Length = 438 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 150/299 (50%), Gaps = 38/299 (12%) Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP-IMH 191 RF A I SR G+I+D N L E M+GR +M I+ Sbjct: 149 RFRRLADAAFEAIAISRAGEIIDCNDQCLMLMDTTRE----------EMIGRNMMDYIIP 198 Query: 192 EISHLPGGHKPLNF--VHKLA---DGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKRL 245 E L ++ V+K+ D T +G + ++ ++ + + DI ++ L Sbjct: 199 EDRGLVAQRIKDDYQQVYKITLIRDDCTTIPVEISGRVALWDHQEVRISAIRDIKDRSEL 258 Query: 246 EE--------------QLEHAAHHDAMTGLLNRRQF-YHITEPGQMQHLAIAQDYSLLLI 290 E QL+H A HD +TG+ NRR ++ E + I S+L+I Sbjct: 259 ERELQQKRGELKEKNRQLKHMAMHDELTGIANRRSAKLYLDELLSPTNPLI----SILMI 314 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK+IND +GHS+GD+VL L L + R D++ RWGGEEF+ +LP T + A S Sbjct: 315 DVDHFKNINDTWGHSEGDQVLQGLVAELNTYLRAADMLARWGGEEFICILPDTGVSAAES 374 Query: 351 LAETIRVSVAKVSISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVL 408 +AE +R SV + S+ G T+SIGVA E G ID+L + D ALY AK+DGRNRV+ Sbjct: 375 VAEKLR-SVVEKSLLGKATVTISIGVASTEFGQMQIDQLLRCADHALYAAKSDGRNRVV 432 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/175 (43%), Positives = 98/175 (56%), Gaps = 3/175 (1%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 + E + +E+L A D++TGLLNRR E +H + ++ LL+D DRFK I Sbjct: 277 LKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKKI 336 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH GD VL TL RK D+V R+GGEEF+LLLP T A + AE IR Sbjct: 337 NDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIRAV 396 Query: 359 VAKVSISGLPR---FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 A I R T SIG++ +G+E+ + R D ALY AKN GRNRV+ A Sbjct: 397 TAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRVVCA 451 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 134/269 (49%), Gaps = 21/269 (7%) Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS 213 V AN L+++G E + K T + + V+ I+H K LN KL+D Sbjct: 62 VYANQLTLDYFGVTLEKL--KGTSDSDYFPANVVDILH-----VNDTKVLNSQSKLSDDI 114 Query: 214 TRHVQTYAGPI-------EIYGDKLMLC----IVHDITEQKRLEEQLEHAAHHDAMTGLL 262 V T A I +Y K L I DIT L +LE A+ D +TGL Sbjct: 115 I--VDTPASLIVYHEVKQPLYNHKGTLIGLIGISTDITAAYHLRSKLERLANTDPLTGLF 172 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR F E + Q +SL++ID D FK +ND YGH GDEV+ +A Sbjct: 173 NRRSFTSFCEHEFFRATRYFQPFSLMIIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHV 232 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAH-HEG 381 R+ D++ R GGEEF +LLP T +D+A LAE +R + + P T+SIGVA Sbjct: 233 READVLARIGGEEFAILLPDTDIDSAYVLAERLREAQQQYEEQKTPSITISIGVATLRSQ 292 Query: 382 NESIDELFKRVDDALYRAKNDGRNRVLAA 410 +++ E+FKR D ALY +KN GRN V A Sbjct: 293 DKAFLEIFKRADKALYSSKNVGRNSVNVA 321 >UniRef50_Q3SHI0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHI0_THIDA Length = 454 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 3/176 (1%) Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI-AQDYSLLLIDTDR 294 V DI E+K +LE A DA+TG+ NR +F + + Q L + Q +S++L D DR Sbjct: 269 VIDILERK--AARLERMATTDALTGIANRARFEELLQLEQQHCLRVPGQPFSVILFDIDR 326 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK IND +GH +GD+VL +AR ++ R D + RWGGEEF +LLPRT LD A +A+ Sbjct: 327 FKQINDTWGHGQGDDVLKTIAREVQGLLRTADTLARWGGEEFAVLLPRTDLDAARVVADK 386 Query: 355 IRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 I ++ +V + + T S GVA E E L R D ALY AK GRN+V+ A Sbjct: 387 ICGALGQVPLERVGTVTASFGVATIESGEPGAALLARADGALYEAKRRGRNQVVQA 442 >UniRef50_C6DEX8 Diguanylate cyclase n=13 Tax=Enterobacteriaceae RepID=C6DEX8_PECCP Length = 526 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 105/166 (63%), Gaps = 7/166 (4%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +L AH D MT LLNRR + QM + ++++ +D DRFK IND YGH G Sbjct: 360 KLRSEAHSDPMTDLLNRRGLDSVLRYWQMGQ----KSFAVIALDIDRFKRINDTYGHDIG 415 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D V+ L++ + + +R D++ R GGEEF++LLP T LD ALS+AE +R+ + + +I + Sbjct: 416 DNVIRYLSQLIRTSSRDSDILCRSGGEEFLILLPETSLDVALSIAERLRLRMEESTIPVV 475 Query: 368 PRFTVSIGVAHHE---GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S+GVA E + SI+ FK D+ALY+AK +GRNRV++A Sbjct: 476 GNITISLGVALWEPGANDTSIERTFKLADEALYQAKQEGRNRVVSA 521 >UniRef50_B6BL86 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BL86_9PROT Length = 422 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 96/168 (57%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT+ + +E E + D++TG+ NR +F + Q + SL ++D D+FK Sbjct: 249 DITKLTQEKEATELKLYQDSLTGINNREKFEEVIYYELKQSKRYNRSLSLAILDIDKFKD 308 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 ND YGH GDEVL L+ ++ R+ DL RWGGEEFVLL T L A++LAE R Sbjct: 309 FNDTYGHLIGDEVLIMLSEEIQKHTRESDLFARWGGEEFVLLFSNTNLQNAMNLAENFRQ 368 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 + K+ TVS G+ ++ +++ +FKR DDALY AKN GRN Sbjct: 369 IIEKLKHKSAGSVTVSFGLTEYKKGDTLKSMFKRADDALYEAKNSGRN 416 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 83/190 (43%), Positives = 110/190 (57%), Gaps = 20/190 (10%) Query: 233 LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLL 288 + IV DITE+K +E QL H A D +TG LNRR F+ E Q L A Y S+L Sbjct: 295 IGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAE----QELERASRYGNAVSVL 350 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 +ID D FK +ND +GH+ GD+ L A + + R+ D R GGEEF +LP T L A Sbjct: 351 MIDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGA 410 Query: 349 LSLAETIRVSVAKVSISGLP--------RFTVSIGVAHHE-GNESIDELFKRVDDALYRA 399 L +AE +R +V ++ LP R T S+GVA + G ++D++ R D ALYRA Sbjct: 411 LLVAERLRQAVEAIA---LPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRA 467 Query: 400 KNDGRNRVLA 409 K +GRNRVLA Sbjct: 468 KAEGRNRVLA 477 >UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX2_RHORT Length = 632 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 152/294 (51%), Gaps = 33/294 (11%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F + +++ID + G I + N +A +GY+ E + + +NML MP + Sbjct: 340 FIMAARDAVVIID--QKGIISEFNPSATELFGYDVEEVRGQ---SVNML----MPATYAR 390 Query: 194 SH-------LPGGHKPLN----FVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 H P G + + + + +GS ++ G G ++ + ++ DITE+ Sbjct: 391 DHDGHLRKGKPSGQRAIGRGREMIGRRKNGSEFPIELTVGTQSFDGTRVHIGVIRDITER 450 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDTDRFKHI 298 K EE L A+ D +TG+LNRR F TE ++ L++A + S++++D D FK + Sbjct: 451 KATEETLRRLANIDGLTGVLNRRSF---TEESELL-LSLANRHGRRLSMMIVDADHFKGV 506 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH GD VL AL + RK DL+ R GGEEF +LLP T + A LA + ++ Sbjct: 507 NDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQEGAEGLAWRVVLA 566 Query: 359 VAKVSI----SGLPRFTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + + G+ + TVS+GV+ + + D + K D ALY AK+ GR+RV Sbjct: 567 IRALEVPLPEGGVLKVTVSVGVSCRNTEAATFDWMLKEADTALYAAKHGGRDRV 620 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/164 (43%), Positives = 99/164 (60%), Gaps = 8/164 (4%) Query: 248 QLEHAAHHDAMTGLLNRRQ----FYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 +LE A+ DA+TGL NRR+ F H + Q A+ SL++ D D FK +ND++G Sbjct: 156 ELEKASITDALTGLFNRRRLDESFAHELDRAQR----YAEPVSLIISDVDHFKSVNDIHG 211 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GDEVL A+A L R D+V RWGGEEF+++ P T LD A +LAE +R ++A Sbjct: 212 HHVGDEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQ 271 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 G+ + S GVA ++ ES + R D ALYRAK +GRNR+ Sbjct: 272 FPGIGTSSASFGVAQYQDGESFKDTVARADTALYRAKVNGRNRI 315 >UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q486E7_COLP3 Length = 428 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 4/201 (1%) Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DGS ++ I I + ++ DI+E+ +L E+L ++ D +T L NRR F + Sbjct: 224 DGSEFAIEVTISKIRIADNVEFTAVIRDISEKNQLLEELILSSRRDPLTELYNRRYFTEL 283 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 + + +SLL++D D FK IND YGH+ GD L A ++ + + R+ D + R Sbjct: 284 LHSEITRSRRFKRGFSLLMLDIDHFKSINDRYGHACGDAALIAFSKAVTNSIREVDTICR 343 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNE-SID 386 WGGEEF++LLP P TA+ +AE IR ++ + L + TVSIG+ + G+ + Sbjct: 344 WGGEEFLVLLPEIPKVTAMVVAEKIRKNIENLETIYEGDLIKVTVSIGLEYFSGDAIEMS 403 Query: 387 ELFKRVDDALYRAKNDGRNRV 407 + +VD LYRAK+ GRN++ Sbjct: 404 SMINKVDQILYRAKDTGRNKI 424 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/170 (45%), Positives = 99/170 (58%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE+ R+EE+L+ AA DA+TGL NR F + E + SLL+ D D FK Sbjct: 245 DITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKA 304 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH GD VL ALA + + R D V RWGGEEF++LLP TPL A LAE +R Sbjct: 305 VNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRE 364 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 VA T S GV +++ L +R D+ALYRAK+ GR+RV Sbjct: 365 RVAAHRFPHGAPVTASFGVCALRDDDTCRTLVRRADEALYRAKHLGRDRV 414 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 1/179 (0%) Query: 230 KLMLCIVHDITEQ-KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 K M+ ++ D E + ++LE+ A+ D++TGL NRR+ I + S++ Sbjct: 313 KDMILVLKDKMENIQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSLSVV 372 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ++D D FK++ND +GH GD VL ++A +++C R GD V RWGGEEF+++LP T + A Sbjct: 373 MVDIDHFKNVNDNFGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDVKGA 432 Query: 349 LSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 L AE +R +V R T S GV + E ++E R D+ALY AK GRNRV Sbjct: 433 LEYAERMRSAVEDNVFHDDIRITSSFGVTQYRSGEPVNEFVARADEALYDAKEKGRNRV 491 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 +RL + + A D +TGL NRR+F + + +++ I + SLL+ D D FK +ND Y Sbjct: 341 ERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLIFDIDHFKRVNDTY 400 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GD VL +A+ L++ R+ D RWGGEEF++LLP T + A++LAE +R ++ + Sbjct: 401 GHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMALAEKLRQAIEEH 460 Query: 363 SISGLPRFTVSIGV-AHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + R T S GV A H+G + L +RVD ALY+AK GRNRV+ Sbjct: 461 DFPRVGRVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRNRVV 507 >UniRef50_A0LBU1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBU1_MAGSM Length = 438 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/162 (41%), Positives = 92/162 (56%) Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 LE +HD +TG NR + Y + S+L++D D FK +ND YGH+ GD Sbjct: 269 LEKKVYHDPLTGAANRSRLYEKFHEEMKRSERYGSPVSILMLDIDHFKRVNDTYGHNAGD 328 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP 368 EVL + + ++ R DLV RWGGEEF+L+ P T L AL +AE IR + ++ + Sbjct: 329 EVLLEVVKRMQGHVRVTDLVGRWGGEEFLLIAPETVLGAALEVAENIRRLIGQIPFGQVG 388 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 R T SIGV ES++ +RVD ALYRAK GR+RV A Sbjct: 389 RVTCSIGVGQLAKGESMNTCLERVDAALYRAKKQGRDRVEMA 430 >UniRef50_A9NHU3 Putative signalling protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHU3_ACHLI Length = 309 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 101/178 (56%), Gaps = 6/178 (3%) Query: 223 PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 P+E+ G IV DITE K+LEEQL A D +T LNRR + E + Sbjct: 136 PLELEG------IVFDITESKKLEEQLIKYAQSDPLTDALNRRMLFKELEHQIYMNTYKN 189 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 +SLL+ D D+FK IND YGH GDEVL + + R+ D+ FR+GG+EF L+LP Sbjct: 190 IPFSLLMFDVDKFKQINDTYGHLVGDEVLIETIQLINKSKRESDITFRYGGDEFFLVLPN 249 Query: 343 TPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAK 400 T AL+L I+ K IS + +S+GV+ ++ E+ID+L RVD +Y++K Sbjct: 250 TRYKDALNLVSRIQDVFKKTPISSVGYVVLSMGVSQYKPGETIDQLINRVDQMMYQSK 307 >UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQS0_9GAMM Length = 314 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 4/177 (2%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 +ITE+KRLE++L+ A D MTG NRR F + YSL ID D FK Sbjct: 138 NITEKKRLEQRLKDLAEKDPMTGAYNRRFFRESIDQHYATFKRYGTTYSLAFIDIDYFKK 197 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH GD V+C L ++ R DL+ R+GGEEFV+L P LD A +AE +R Sbjct: 198 VNDQFGHDVGDGVICHLVTHIQEQLRTTDLLSRFGGEEFVVLFPHINLDEACLVAERLRA 257 Query: 358 SVAKV---SISGLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ SI+ FTVSIG++ +ES++++ KR D ALY++K+ GRN+V A Sbjct: 258 TIEMTPYKSINHKVPFTVSIGISEVRAEDESVEDILKRADSALYQSKSSGRNKVTGA 314 >UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9J2_CHRVI Length = 498 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 123/220 (55%), Gaps = 27/220 (12%) Query: 211 DGSTRHVQ-------------TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDA 257 DG TR V+ + P+ G L + DI+E K ++++L A+ D Sbjct: 265 DGETREVRFDGLEQDRKHWALVSSTPMNFSGIPSRLIGLADISELKAIQDELRAASFTDP 324 Query: 258 MTGLLNRRQFYHITEPGQMQH-LAIAQDY----SLLLIDTDRFKHINDLYGHSKGDEVLC 312 +TGL NRR Y ++ H + +A Y +++L D D FK IND +GH GD+VL Sbjct: 325 LTGLYNRRYLYQ-----RLAHEIDLANRYKHPLAVILFDLDLFKRINDTFGHGVGDDVLV 379 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV--SISGLPRF 370 ++ TL+SC R+ D+ R GGEEF+++LP L A +AE IR SVA++ S+ GL Sbjct: 380 CVSGTLKSCIREVDVAGRHGGEEFLVILPHADLTEATEVAERIRASVAQISWSVEGLAA- 438 Query: 371 TVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S GVA H G ES+D D LY AK+ GRNR+LAA Sbjct: 439 TISGGVAQHCG-ESLDAFLDVADRRLYMAKDSGRNRILAA 477 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 144/289 (49%), Gaps = 14/289 (4%) Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE--INMLGRRVMP 188 Y F + S P+ ++ DG I + N AA Y+ Q + + + + V P Sbjct: 153 YLTIFESLSMPVFIV--GLDGTIENMNHAASGMLHYDTAPGTQYYGEKDTLKLFFIEVFP 210 Query: 189 IMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCIVHDITEQKRL 245 + + + + G F + D +++ ++I G + I+ DIT++K + Sbjct: 211 WLDKSFKNFISGTDTKKTFETAINDKGQFFFISFSRSLDISGKFSNAIAIIEDITKRKTM 270 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E++LE A D +TG NRR F ++ E + +L++ID D FK IND +GH Sbjct: 271 EKELEKLATTDPLTGAKNRRSFLNLFEKEMKRSKRYNYTLALVMIDIDHFKKINDNFGHE 330 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD++L L S R D+ RWGGEEF++LLP T L A S AE +R ++A+ + Sbjct: 331 TGDKILNLLVAKCHSVLRDSDIFARWGGEEFIILLPETDLLQASSAAERLRGALAQSELR 390 Query: 366 GLP----RFTVSIGVAHHEGNES--IDELFKRVDDALYRAKNDGRNRVL 408 FTVSIG GN++ IDE+ K+ D ALY AK GRNR + Sbjct: 391 TNDGTNINFTVSIGFTIF-GNKNILIDEIIKKADKALYLAKKQGRNRAV 438 >UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SQW2_9BURK Length = 407 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 21/189 (11%) Query: 238 DITEQK----RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ-DYSLL--LI 290 D+ QK R E + A HD +TGLLNRR H+ E +++ +++ D+ L+ L+ Sbjct: 206 DLRRQKHDLARALEHIRELATHDELTGLLNRR---HMLELMRLEQRRVSRSDFPLVIALL 262 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK +ND +GH+ GD VL A A+ + C R GD++ RWGGEEFVL+L TP + A + Sbjct: 263 DVDHFKAVNDTHGHAAGDRVLQAFAQAVRRCVRDGDVISRWGGEEFVLMLCNTPPEAARA 322 Query: 351 LAETIRVSVAKVSI-----------SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRA 399 L E +R +VA +S+ +G R TVSIG A H I+E +R D ALY A Sbjct: 323 LLERVREAVAALSVPADRGDGAGASAGHLRITVSIGFALHRPRHPIEETLERADRALYAA 382 Query: 400 KNDGRNRVL 408 K GRNR + Sbjct: 383 KLGGRNRTV 391 >UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KMS8_SHEWM Length = 482 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 39/305 (12%) Query: 124 QRKKQGFYARFFLTNSAP--MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN- 180 Q++ QG L N+AP +L+ D S+ +V+ E +CQK + + Sbjct: 184 QKQLQG------LINAAPTGILITDESKKLVMVN-------------EFICQKLSLTTDE 224 Query: 181 MLGRRVMPIM---HEISHLPGGHKPLNFVHKLADG-----------STRHVQTYAGPIEI 226 +LGR + + + + +L K +++ + D T V+ + Sbjct: 225 LLGRNPLTFIAKKYRLEYLSEIQKHISYDDTILDSRMDLTMTLPSNETIKVEMAFSTLIF 284 Query: 227 YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 KL++ + DITE+KRLE QL A D +TG NRR F +++ Q+++ Sbjct: 285 EKKKLVITAITDITERKRLETQLRILASTDPLTGAYNRRCFNELSQKSMSSTERQEQEFT 344 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 +LLID D FK IND +GH+ GD+VL + + +C R+ D++ R+GGEEFV+ LP + Sbjct: 345 ILLIDLDFFKSINDKFGHAAGDDVLIETVKAINTCIRESDILGRYGGEEFVVALPNSDNK 404 Query: 347 TALSLAETIRVSVAKVSISGLP---RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDG 403 A +A IR+ + + + + T SIG+A G +++ + D LY AK++G Sbjct: 405 KAREVANRIRLCIENMVVKTQGHDIKLTASIGLATSSGGHQLEKQINQADTYLYYAKDNG 464 Query: 404 RNRVL 408 RN+V+ Sbjct: 465 RNQVV 469 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/166 (45%), Positives = 101/166 (60%), Gaps = 2/166 (1%) Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 +E QL+ A+ D +TGL NRR I E + + SL+L+D D FK +NDL+GH Sbjct: 195 MEAQLD--AYTDFLTGLRNRRYLELILERELFRLQRYGRPLSLVLLDLDGFKAVNDLHGH 252 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD VL ALA+ +E+ R+ D R GGEEF LLLP TPL AL LAE +R +V +++ Sbjct: 253 EVGDRVLQALAQRIEAHLRRSDRAVRLGGEEFALLLPETPLPQALRLAERLRRAVEAMAV 312 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + R T S GVA ++ L +R D+A+YRAK G+NRV AA Sbjct: 313 PPVARITASFGVAEARPTDTPLTLLRRADEAMYRAKRKGKNRVEAA 358 >UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV7_DESAS Length = 1021 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 16/294 (5%) Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN-M 181 +++ + F+ ++ L++ A + + + +I++AN AA+ GY+ + + T IN + Sbjct: 473 RKQAEEFFKKYKILSDCAHDFFLFINGNKKIIEANQAAVEALGYSRDDLL---TLNINDL 529 Query: 182 LGRRVMPI-MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 L + + +++ V K DGST ++ I +++ L + DIT Sbjct: 530 LALEALKLNKNQMEQAYQNGILFETVAKRKDGSTFPIEVNLRGTFIGNERVFLSVGRDIT 589 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE--PGQMQHLAIAQDYSLLLIDTDRFKHI 298 +KR E++L++ A HD +T + NR Y + E + + + LLLID D FK + Sbjct: 590 NRKRFEQKLQYLASHDPLTNISNR---YSLEEYLTRFVAKAKLGRTGVLLLIDLDNFKMV 646 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH+ GDEVL AL TL R+ D + R+GG+EFV+LL T + A+ +AE +R + Sbjct: 647 NDTYGHAAGDEVLIALVNTLRLNLREEDFIARFGGDEFVVLLDNTTVAEAMLIAEKLRNA 706 Query: 359 VAK-----VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 V + T+SIG +GN+ +L VD ALY AK GRN + Sbjct: 707 VDNNAFCLCTFKTCFNLTISIGAVLIDGNQDAQKLLSIVDAALYVAKESGRNSI 760 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/179 (43%), Positives = 102/179 (56%), Gaps = 6/179 (3%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 I DIT++K LE +LE A D +TGL NRR F+ + E + +SLL++D D Sbjct: 431 IDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDH 490 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK ND YGH GD VL L+ R+ DL R GGEEF ++LP T D A+ +AE Sbjct: 491 FKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAER 550 Query: 355 IRVSVAKVSI-----SGLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRV 407 +R+++A + S FTVSIGV +D+L KR DDALY AKN GRN+V Sbjct: 551 LRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQV 609 Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 7/138 (5%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPML-LIDPSRDGQIVDANLAALNFYGYNHETMC 172 L+AS +A Q +++ R L NS+ + +IDP + +D N GY+ E + Sbjct: 56 ALEASENARRQAEQELKLLRTLLDNSSDAIEVIDPV-SFRFLDVNETECRELGYSREELL 114 Query: 173 QKHTWEINMLGRRVMP--IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 H ++I+ V I E++ + G + VH+ DGST V+ A ++ Sbjct: 115 SLHIFDIDPEFSEVAAKHIEEELNQVSGVR--FDSVHRRKDGSTFPVEVSAKQVKT-DRP 171 Query: 231 LMLCIVHDITEQKRLEEQ 248 + CI DI+ +K LE + Sbjct: 172 YLFCIARDISVRKLLESE 189 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 114/215 (53%), Gaps = 11/215 (5%) Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDA 257 G KP++ + DG + + D + I D+T+ R E+LE A D Sbjct: 117 GDPKPMDLA--MIDGKALRCH-----LAVLPDGGRMLIYSDVTDIVRNAEELERLATTDG 169 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 MTG+ NRR F + + + + S L+ID D FK IND +GH GD+++ LA+ Sbjct: 170 MTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFGHQVGDDMIVHLAKL 229 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSI 374 C R D++ R GGEEF LLLP T L AL++AE +R VA S+ SG R TVSI Sbjct: 230 ARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASSLLMASGSVRATVSI 289 Query: 375 GVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRVL 408 G A + I +L + D ALY AK+ GRNRV+ Sbjct: 290 GAATSAATIDGISDLMRAADRALYEAKHGGRNRVV 324 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 229 DKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 DK +L ++ D T++K+ EE+L A D++T L NRR F+ + HL AQ S+L Sbjct: 386 DKGVLWMMDDATKRKKAEEKLVRIAATDSLTKLNNRRHFFSLGHEELALHLHNAQPLSVL 445 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ++D D FK++ND GH GD+VL ++ R D++ R GGEEF ++L TP A Sbjct: 446 MLDIDHFKNVNDTLGHQAGDKVLKIFSKICAVNLRSVDIIGRIGGEEFAVILTNTPRSQA 505 Query: 349 LSLAETIRVSV---AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 AE IR+++ + + LP+ TVSIG+A ++ E++D + R D LY+AK++GRN Sbjct: 506 QRTAERIRLAIETSPEFTKQSLPKITVSIGIATNQPPENLDAIICRADKNLYQAKSNGRN 565 Query: 406 RV 407 R+ Sbjct: 566 RI 567 >UniRef50_C0QT05 Diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QT05_PERMH Length = 338 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 2/169 (1%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 I +K ++ +LE AH+D +T +LNRR F I ++ SL+++D D FK I Sbjct: 167 IIAKKEVKGKLEFQAHYDPLTKVLNRRSFIAIYNSIINRNDIFPA--SLMIMDIDDFKKI 224 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH+ GD+VL + ++S RK DL RWGGEEF++ P T +D A +AE IR Sbjct: 225 NDTYGHNVGDKVLKKIVDVIKSNIRKKDLFVRWGGEEFIIFFPETDIDQARVVAEKIRRL 284 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + TVSIG+ + E + E+ KR D ALYRAK + +NRV Sbjct: 285 IENIKFEENFNVTVSIGITELKKGEFLVEVIKRADRALYRAKKNNKNRV 333 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 8/215 (3%) Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDA 257 G P++ + G+ HV A + +L + +IT++K+ E+ L DA Sbjct: 311 GEAGPVDVRMLTSSGNHIHVMLAASSLRFDNKAAVLTSLVEITDRKQREQALTRMTQTDA 370 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TG NRR F+ + A Q SLLLID D FK +ND +GH+ GD VL LA Sbjct: 371 LTGFYNRRGFFE--RANALLQSARDQAPSLLLIDADHFKRVNDTHGHAVGDTVLVQLANR 428 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK--VSISGL--PRFTVS 373 + + R+GD++ R GGEEF + LP T L+ A LA+ IR+SV++ + I GL P T+S Sbjct: 429 MNAALREGDVIGRIGGEEFAVFLPTTSLENAYELADRIRLSVSRHALRIQGLRVP-MTLS 487 Query: 374 IGV-AHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 IGV G +++ R D A+Y+AK +GRNRV Sbjct: 488 IGVTVLQPGESTLEAALGRADTAMYQAKQNGRNRV 522 >UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JI7_THICR Length = 420 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 2/204 (0%) Query: 206 VHKLADGSTRHVQTYAGPI-EIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 +++ DGST + +T PI GD + + D++EQ +++++L A DA+TG+ N Sbjct: 214 MNRCKDGSTYYEETTISPIFNRDGDIEYFVSTGKDVSEQVKMQQELNDLAMKDALTGIWN 273 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR + + + +++ D D FK IND +GH GDE L +A+ ++ R Sbjct: 274 RRHLTDVVNTEMKRVNRYGGRFGMIMFDVDYFKQINDDFGHDIGDETLVQIAKIVQKIVR 333 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNE 383 + D + RWGGEEF+L+ LAE IR ++ + + + TVS+G + NE Sbjct: 334 ETDYIGRWGGEEFLLIALELDASLTAKLAEKIREAIEEFVFPKVGQVTVSLGATVYHKNE 393 Query: 384 SIDELFKRVDDALYRAKNDGRNRV 407 + +LFKR D+ALY AK GRNRV Sbjct: 394 TEAQLFKRADEALYLAKRHGRNRV 417 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 43/360 (11%) Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 HDI E+ T + EE S + + +L + E +F +GL + S N Q Sbjct: 120 HDISELETTR---EEIGKSSKGIPFELEQQEEKKLF--------MGLSQAISRNL---SQ 165 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQI-VDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 ++ F N P L+ + D I +D N + LN G++ + + E+ +L Sbjct: 166 EIFSHAFCLN--PTLMSITAFDESIYLDVNESFLNTLGFSRDEVIGHSCSELGILSISQK 223 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP--IEIYGDKLMLCIVHDITEQKRL 245 + E+ G K N+ K + V I++ KL+L + HDITE+ R+ Sbjct: 224 KEIQEMLLKKG--KIRNWESKFIAKAGEEVPGLLSVDLIQLRDKKLLLMVFHDITERIRM 281 Query: 246 EEQLEHAAHH--------------DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 +E+LE D++TGL N RQ + + Q+ +++++D Sbjct: 282 KEELEEKNQQLRELNRILQVQAITDSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLD 341 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND +GH GD VL +A+ ++ R D+ R+GGEEF+++LP+T L+ + Sbjct: 342 IDHFKSINDEFGHQVGDVVLVEVAQIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQV 401 Query: 352 AETIRVSVAKVSISGLPR----FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 E IR +V I G TVSIG++ H+G E +D + +R D LYRAK GRNR+ Sbjct: 402 GERIR---RQVEIEGFEDSKEGITVSIGISQHQGEEMVDYI-ERADQLLYRAKRKGRNRI 457 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 119/218 (54%), Gaps = 11/218 (5%) Query: 202 PLNFVHKLA-DGSTRHVQTYAGPIEIYGDKLMLCIV---HDITEQKRLEEQLEHAAHHDA 257 PL++ +L G TR T P+ Y ++ + IV DITE+KR EE L + A D Sbjct: 363 PLSYEEELVLPGGTRVWHTTLTPV--YEEERITSIVGSAQDITERKRAEEHLRYLATTDE 420 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TGL NRR F I + + Q +L+ +D D FK IND +GH+ GD L LA Sbjct: 421 LTGLYNRRHFMEILDTEIERAKRYEQSLALISLDIDHFKTINDTHGHAVGDAALEHLAAQ 480 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSI 374 L +C R+ D + R GGEEF L+ P T A LAE IR + + I S T+S+ Sbjct: 481 LLACKRQPDSLGRLGGEEFALIAPHTDRAGATELAERIRSELERTPIELESTSLHPTISL 540 Query: 375 GVA--HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 GV + + N++ID L KR DDALY AK GRNR + + Sbjct: 541 GVTALNIQDNDTIDALLKRADDALYEAKRTGRNRTVTS 578 >UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Proteobacteria RepID=D0J6P1_COMTE Length = 462 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 100/173 (57%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DI+ + E +L A+ D +TGLLNR + Q+Q + Y ++L D D FK Sbjct: 252 DISRMVQREMELRERANRDKLTGLLNRHAGETELKRNQLQAQNQLRPYGVILGDIDLFKQ 311 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH GD VL +A L R+ D RWGGEEF+++L L A LAE IR Sbjct: 312 VNDRFGHVAGDRVLKMVAHVLSGKVRRYDRAVRWGGEEFLIVLSDASLGVAAGLAERIRC 371 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +VA+ + + RFT+S+GV E E+ D+L KR D ALYRAK+ GRN+V A Sbjct: 372 AVAECADPEVGRFTISLGVGLWEPGETEDDLLKRADAALYRAKHRGRNQVAIA 424 >UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9K1_SULNB Length = 409 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 12/179 (6%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD--YSLLLIDTDRFKHI 298 E + E+L+ A D +T L NRR F +TEP LA D ++++ID D FK I Sbjct: 233 ELNKTNEKLKKLASTDPLTELFNRRHFESLTEP--FLELAKRNDTEIAIIVIDIDNFKKI 290 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH GD+V+ LA L+ +R+ D+V RWGGEEF++LL T + L++AE IR Sbjct: 291 NDTYGHKVGDDVIVDLATILKRGSRQSDIVCRWGGEEFIILLANTNGKSVLTIAEKIRKK 350 Query: 359 VAKVSISGLP-----RFTVSIGVA--HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 V + + L +FT+S GVA + E N SI + R D ALY+AKN G+N+V+ + Sbjct: 351 VENL-VRTLEDGNELKFTISCGVALVNKESNTSIHNVIDRADRALYKAKNSGKNKVVES 408 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 5/180 (2%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 ++ D+T++KRLE+QL + D +T L+NRR+ + + + + + S+LL+D D Sbjct: 379 ALILDVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDVD 438 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK ND YGH +GD VL ALA ++S R D R+GGEEF ++LP T D A+ +A+ Sbjct: 439 HFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVAD 498 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESI---DELFKRVDDALYRAKNDGRNRVLAA 410 +R VA+ + GL R T+SIGVA + + SI D + + D ALY AK GRN+V+ A Sbjct: 499 RLRERVAEKEVDGL-RVTISIGVASYP-DLSITRPDAMVRAADSALYVAKEQGRNKVVYA 556 >UniRef50_B9Z7N2 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7N2_9NEIS Length = 515 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 7/171 (4%) Query: 243 KRLEEQL---EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 + +++QL ++ DA+TGL NRR+ + + + Q +++L+ID D FK +N Sbjct: 347 RAMQQQLNRFRQESNTDALTGLGNRRELDSVLDDWKYSR----QPFAVLMIDIDFFKSVN 402 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D YGH GD+ L ALA+ + AR+GD+V R GGEEFV+LLP A +AE + V Sbjct: 403 DSYGHDTGDQALTALAQLMRDSAREGDVVCRMGGEEFVMLLPGADAIGAERVAERLCSRV 462 Query: 360 AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + GLP TVSIGVA +E+ + L + DDALY+AK GRNRV+ A Sbjct: 463 EAYRVPGLPALTVSIGVAAGIADETPEALLREADDALYQAKQQGRNRVVLA 513 >UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=Vibrio RepID=C9E5K7_VIBCH Length = 423 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 205 FVHKLADGSTRH-------VQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDA 257 F++K DG+ H ++ AG I Y + + D+TE+ R E+ L +A D Sbjct: 208 FINKRKDGTLYHSEQSISAIKDQAGNITNY-----VSVGKDVTERLREEQALRESATVDQ 262 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TGL NR + L+ + SL+L D D FK IND +GH GD++L ++ Sbjct: 263 LTGLFNRNHGKALLSEAYSFTLSREEPMSLILCDIDHFKQINDSFGHPVGDQILAQVSGL 322 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVA 377 L R D V RWGGEEF++LL A LAE +R+ +A + + TVS+GVA Sbjct: 323 LRKSVRGNDRVIRWGGEEFLILLENCTDMVAAELAERLRLRIASEQFQSVGKVTVSLGVA 382 Query: 378 HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ES+++L R D+ALY++K +GRN++ A Sbjct: 383 SLFQKESLEQLISRCDEALYKSKRNGRNQLTLA 415 >UniRef50_C7I2H1 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2H1_THIIN Length = 523 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 4/188 (2%) Query: 223 PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 P+ G+ ++ + +I+ QK LE+QL AH D +TGL NRR F+ + E A Sbjct: 330 PLRFAGEDCIVTGMVEISAQKHLEQQLRALAHTDPLTGLQNRRGFFAMVEHALRTRPAGQ 389 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 ++LID D FK IND YGH GDE+L A+ + S R+GD+ R GGEEF +LL Sbjct: 390 PGPCIMLIDLDHFKQINDRYGHPVGDEILVEFAQVVLSLLREGDVFARMGGEEFCILLAH 449 Query: 343 TPLDTALSLAETIRVSVAK---VSISGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYR 398 AL +AE +R VA + +G+ R ++S+G+A + +SID + D A+YR Sbjct: 450 MRASQALEVAERVREFVAAHPFQTSAGVVRLSLSLGIAGCDAPVQSIDRVLSMADQAMYR 509 Query: 399 AKNDGRNR 406 AK GRNR Sbjct: 510 AKQGGRNR 517 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 95/173 (54%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 + + Q+ L E + AH D +TG+ NRR Y + S++L D DR Sbjct: 202 VKSQLARQRTLAEAMHRLAHTDPLTGISNRRSLYAALRREMEAARRYGKPLSVILFDLDR 261 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK +ND YGH++GD L +A T + R D + RWGGEEF++L P T LD A LAE Sbjct: 262 FKLLNDTYGHNQGDAALRRVAHTARAALRASDHLGRWGGEEFIVLAPETDLDQARHLAER 321 Query: 355 IRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +R ++A G P T S GVA ++S ++L +R D+ LYRAK GRNR Sbjct: 322 LREAIALDRPPGRPPLTASFGVASCRPDDSPEDLLRRADEGLYRAKAGGRNRA 374 >UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVB7_9AQUI Length = 525 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 5/260 (1%) Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-LPGGHKPLNFVH 207 ++ I+ AN A GY+ E + I + + ++ I + G KP ++ Sbjct: 263 KNNSIIYANRAVSEITGYSEEELESLKDPLILIHPKDKHIVIKNIQRRIKGERKPFSYSV 322 Query: 208 KL--ADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRR 265 + G T+ V+ + I G++ L + DIT++K E +L A HD +TG+ NRR Sbjct: 323 RFLTKGGKTKWVKIVSSVITYRGEESTLVTLIDITKEKARERKLHTLATHDQLTGVYNRR 382 Query: 266 QFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKG 325 E +S++LID D FK++ND +GH GD VL A+ ++ R+ Sbjct: 383 ALLMFFEKYLHSARRYGIPFSVILIDLDNFKYVNDQFGHQTGDRVLKTFAKLVKGSLRRT 442 Query: 326 DLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESI 385 D+ RWGGEEF+ LLP D +AE +R V + S + R T S G + + I Sbjct: 443 DVFGRWGGEEFLALLPFN--DKPYMVAEKLRRKVEETEFSRVGRVTASFGATTYREGDDI 500 Query: 386 DELFKRVDDALYRAKNDGRN 405 D + R D+ALY AK G+N Sbjct: 501 DSMMARADEALYEAKRKGKN 520 >UniRef50_A8TIT4 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIT4_9PROT Length = 403 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 8/171 (4%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD----YSLLLIDTDRFK 296 E +R + +E A D++TGL NRR F + E +A +QD SLL ID D FK Sbjct: 226 ELRRARQDIETLARTDSLTGLWNRRHFEDMIE----VEIARSQDEGSPLSLLAIDADYFK 281 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 +ND +GH GD VL L L R+ D++ RWGGEEF++LLP T D A +LA TIR Sbjct: 282 RVNDRFGHHTGDAVLRELTDLLGQQIRERDVLCRWGGEEFIILLPATDRDEAAALAGTIR 341 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +VA + + TVSIGV +E+ ++ +RVD ALY AK +GRN+V Sbjct: 342 NAVAGYGFTAIETMTVSIGVGLILADETAEDWLRRVDSALYDAKQNGRNQV 392 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 90/164 (54%) Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 +L+ E A D +TGL NR + + + + S+LL D D FK IND YG Sbjct: 324 KLKNVAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYG 383 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H KGD L +A RK D V RWGGEEF+ +LP T LD A +AE IR ++ + Sbjct: 384 HDKGDYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYN 443 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + R TVSIGV + E +D KR D+ALY AKN GRNRV Sbjct: 444 FKDIGRVTVSIGVTMLKIGEPLDNAIKRADEALYAAKNKGRNRV 487 >UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYL1_CLOB8 Length = 568 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 96/173 (55%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 I+ I +K + +L+ D +T + NRR F +Q S+L++D D Sbjct: 384 IIKQIKHEKEVNTKLQLEVITDKLTNIYNRRYFEETVVNKILQLEKEKSLVSMLVLDIDH 443 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK +ND YGHS GD VL A ++ C RK D++ RWGGEEFV +LP T + +AET Sbjct: 444 FKKVNDTYGHSTGDLVLSETAMIIKQCLRKEDILVRWGGEEFVAVLPFTDSKESTIIAET 503 Query: 355 IRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 IR+S+ + + TVSIG+A + E F+R D+ALY AK +GRN V Sbjct: 504 IRLSIENHKFKFVNKITVSIGIAEKDVVEDFHSWFRRADNALYNAKENGRNTV 556 >UniRef50_B0K6G6 Diguanylate cyclase and metal dependent phosphohydrolase n=6 Tax=Thermoanaerobacter RepID=B0K6G6_THEPX Length = 909 Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 13/290 (4%) Query: 118 SRSANYQRKKQGFYARF--FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 SR +K + R+ N ++L DG+I++ N AA+ YGY E + + Sbjct: 439 SRDITKNKKTEQILKRYKLLFDNINDIILFARYEDGKIIEVNKAAIKAYGYEMEELLKMD 498 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI 235 +E+ + + + ++ G LN HK DGS +V+ ++ +KL++ I Sbjct: 499 IFELCNCEKEELTQLLDVEAERG--VLLNLQHKRKDGSEFYVEANVVSVDFENEKLIMTI 556 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 + DITE+K +E+LEH HD +TGL NR F Q++ L++ D D Sbjct: 557 IRDITERKLAQEKLEHLGTHDILTGLYNRNFFEEKLAFVGKQNIVPT---GLIICDADGL 613 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K IND GH GD +L A L C R D++ R GG+EF ++LP ++ + I Sbjct: 614 KLINDTIGHKAGDMLLKTAADVLRKCFRGQDIIARIGGDEFAVILPNASIEIVEEAVDRI 673 Query: 356 RVSVAKVSIS----GLPRFTVSIGVA-HHEGNESIDELFKRVDDALYRAK 400 R V + +P ++SIG A + + I+E+FK D+ +YR K Sbjct: 674 RKMVENSKFTFEKENIP-LSMSIGYAVKNNSFKKIEEVFKEADNNMYREK 722 >UniRef50_C8X2Z9 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2Z9_DESRD Length = 581 Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 149/323 (46%), Gaps = 53/323 (16%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L ++A Y +Q R L ++ P ++ D + + N A FYG Sbjct: 285 ASGVLAANLHKAAEYASSEQ---RRTLLLDALPAMISYVDSDLRYQEVNAAYERFYGLGT 341 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGST----RHVQTYAGPI 224 E +LGR++ I+ + +P + + G T R + T AG Sbjct: 342 E----------RILGRKIEDILD--PEIFSNFRP--YWDAVLRGETVSYEREIVTPAGER 387 Query: 225 EIY-GDK-----------LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQ-----F 267 I+ GD IV D+T++ H A D +TGL NRR+ F Sbjct: 388 RIFQGDYHPHQDHQGEVFGFYAIVRDVTDR--------HQAQTDYLTGLPNRRRLERDGF 439 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 +T+ + +D S ++ID D FK ND +GH GDE L A+A L S +R D+ Sbjct: 440 LQLTQAHRYD-----KDLSFMMIDLDDFKSFNDQFGHLYGDEALKAVAELLRSASRDADI 494 Query: 328 VFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRF-TVSIGVAHHEGNESID 386 RWGGEEF LLLP T LD A +AE +R VA + G+ RF T S+GVA + + Sbjct: 495 PARWGGEEFALLLPETDLDGAREVAERLRARVATLDF-GMGRFVTASLGVAQARAEDDLS 553 Query: 387 ELFKRVDDALYRAKNDGRNRVLA 409 L R D ALYRAK GRN+V A Sbjct: 554 ALQDRADQALYRAKMAGRNQVAA 576 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 2/205 (0%) Query: 205 FVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 F++K DGS + + P+ + + I D+T + E++L AH D +TGL Sbjct: 245 FINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDPLTGLN 304 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR H E + +SL++ D D FK +ND YGH GD VL ++A L+ Sbjct: 305 NRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQRI 364 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGN 382 R D+ RWGGEEF++L+P + LD A LA+ IR V + I T+S+GVA Sbjct: 365 RLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTGSVTISLGVAQLSPG 424 Query: 383 ESIDELFKRVDDALYRAKNDGRNRV 407 E+ L +R D ALY+AK GRNRV Sbjct: 425 ETAASLIQRADKALYQAKRRGRNRV 449 >UniRef50_B1YHF2 Diguanylate cyclase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHF2_EXIS2 Length = 366 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/178 (42%), Positives = 109/178 (61%), Gaps = 13/178 (7%) Query: 237 HDITEQKRLEEQLEHA---AHHDAMTGLLNRRQFY-HITEPGQMQHLAIAQDYSLLLIDT 292 H +TE +R E +++ A DA+TGL NRR+ ++ G + + YSL+LID Sbjct: 181 HLLTELRRHFENIQYQQKLAMTDALTGLANRRRLDDSLSLVGSAE-----EGYSLILIDI 235 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FKH+ND YGH GD+VL L TL S AR DLV R+GGEEF+++LP T L A S+A Sbjct: 236 DFFKHVNDTYGHDAGDDVLRQLGTTLASLARPDDLVGRYGGEEFLIILPNTSLADAKSIA 295 Query: 353 ETIRVSVAK--VSISGLP--RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 E R +VA+ + +P + T+S+G+AH + + E ++ D ALY +K+ GRNR Sbjct: 296 ELARTTVARNLFPTTAVPDLQITISLGIAHSSSSHTSLEALQQADKALYHSKDSGRNR 353 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/161 (40%), Positives = 94/161 (58%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 E+ + + D +TGL N+ +F + + + + SL++ D D FK IND YGH Sbjct: 299 EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKV 358 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL ALA+ ++ RK D RWGGEEFV+L P T ++ A LAE +R +V Sbjct: 359 GDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPT 418 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + T+S+GVA E +E ++ R D ALY+AK GRNRV Sbjct: 419 VGKVTISLGVAQLEPDEKPEDFIVRADMALYKAKEGGRNRV 459 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 128/261 (49%), Gaps = 11/261 (4%) Query: 157 NLAALNFYGYNHETM------CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA 210 N AA +GY + M C H E N+L + + I L + + Sbjct: 508 NPAAEKIFGYRADEMLGESLQCCFHA-EDNLLPENLGNTDNYIDGLLSSYGSFTVNVRRK 566 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 G + P+ ++ D+TE+K E++L A D++TGL NRR F Sbjct: 567 GGDVFPAEVLLSPLRKDDQWWVVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMES 626 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 E + +D SLL++D D FK +ND+YGH GD+VL L++T R D+ R Sbjct: 627 AEDALERTRRYGRDLSLLMMDIDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGR 686 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVA-HHEGNESID 386 GGEEF +LLP T LD A +AE +R + + SG TVSIGVA + E ++++ Sbjct: 687 IGGEEFSILLPDTGLDGATLVAERLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLE 746 Query: 387 ELFKRVDDALYRAKNDGRNRV 407 +L K D LY AK GRN+V Sbjct: 747 QLLKAADIGLYAAKEAGRNQV 767 >UniRef50_B8E8E4 Diguanylate cyclase n=3 Tax=Shewanella baltica RepID=B8E8E4_SHEB2 Length = 385 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 11/212 (5%) Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 KP F+H +A S + AG I I +++ +V RL ++L A D++TG Sbjct: 177 KPELFIHLVAKSSFQSGLVIAGMIYIIFSTVVILLVR----LDRLNKELSTLASQDSLTG 232 Query: 261 LLNRRQFYHITEPGQMQHLAIAQDY--SLLLIDTDRFKHINDLYGHSKGDEVLCALARTL 318 L NRR F H + ++++ S+L++D D FK IND++GH+ GD VL A L Sbjct: 233 LFNRRAFMH-----NATSIIASENFPVSVLMLDLDNFKKINDVHGHNVGDTVLKLCADAL 287 Query: 319 ESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAH 378 + ++ ++ R+GGEEF +LPR + AL ++E +R+++ ++++ R ++SIGVA Sbjct: 288 QDGLKQYGIIGRFGGEEFAAILPRADSEQALVVSEKLRLAIETINVNPDIRLSISIGVAT 347 Query: 379 HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 SI+ L R D ALY AK+ GRN+V+ A Sbjct: 348 SSSVSSIEPLLIRADKALYEAKSKGRNQVIHA 379 >UniRef50_C5V0N5 Diguanylate cyclase n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V0N5_9PROT Length = 454 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 110/337 (32%), Positives = 158/337 (46%), Gaps = 36/337 (10%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI- 153 L +PV++ E LG N K Q + A +++ + G + Sbjct: 132 LASVDPVVMMEHKTLADVLGTSRVEMVNASTKTQAVLEQLIYAEDAMLIVENRKLIGIVT 191 Query: 154 -----------VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH-K 201 VD +L N+ + +T+ Q+ T I I HL H K Sbjct: 192 AKDVIKMICDCVDMSLPIRNYMTQHVKTINQRAT------------IKAAIEHLKVNHFK 239 Query: 202 PLNFVHKLADGSTRHVQTYAGPIEIYG--DKLMLCIVHDITEQKRLEE----QLEHAAHH 255 V D R Q I YG +LM H++ E ++ E QL+ + Sbjct: 240 RAIVVDDHNDVVGRITQRELIGI-TYGRWAELMKLHAHELGELVQVLESKNIQLQEESVT 298 Query: 256 DAMTGLLNRRQFYHITEP--GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D +TG NRR F +TE G+ +A +S+L++D D FK IND++GH GDEVL Sbjct: 299 DPLTGAGNRRLFNQVTEAEIGRFYRHQMAT-FSVLMLDIDFFKKINDVFGHPFGDEVLKT 357 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVS 373 L+ ++ R D+ RWGGEEFV+LLP ++ A LAE IR +A + + TVS Sbjct: 358 LSNRVKRRLRTSDVFARWGGEEFVVLLPTADINAASVLAERIRAEIADSPVFE-HQVTVS 416 Query: 374 IGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 IGVA ++ ES + L +RVD ALY AKN GRN+V+ A Sbjct: 417 IGVAEYQRGESQEALLQRVDIALYEAKNSGRNKVVKA 453 >UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH39_THEAB Length = 167 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 95/163 (58%) Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 L ++L++ + D +T L NR + + +SLL++D D+FK IND YGH Sbjct: 3 LNKKLKYLSERDQLTDLYNRHKMNEEIRKHYYNFKRYGRPFSLLMVDIDKFKKINDTYGH 62 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GDEVL LA+ L RK D+ RW GEEF++LL T L+ A+ +AE IR ++ K S Sbjct: 63 MVGDEVLKKLAKILVKNIRKTDIASRWVGEEFLILLSETDLEQAIEVAEKIRKTIEKESF 122 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 R TVSIGV E +E I +L VD+ LY+AK GRNRV Sbjct: 123 PKDIRITVSIGVDSVENHEHIKDLLILVDEKLYKAKESGRNRV 165 >UniRef50_Q2BQ31 PAS/PAC sensor hybrid histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ31_9GAMM Length = 1079 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 104/177 (58%), Gaps = 4/177 (2%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 I +IT+QKR+EE + D +TGL NR + + +H +S+LL+D D Sbjct: 896 AISENITDQKRIEE----LSVTDTLTGLNNRLKIDELLAAQMERHERHGLKFSVLLLDVD 951 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FKH+ND +GH GD++L LA L+S RK D V RWGGEEFV++ T A LAE Sbjct: 952 NFKHVNDNFGHDVGDKLLKDLANVLKSNVRKIDTVGRWGGEEFVVICENTSSANAYVLAE 1011 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R +A+ + + TVSIG++ +S+ +FKR D ALY AK++G+N+V+ Sbjct: 1012 KLRTIIAETDFGVVGQKTVSIGISELYDGDSLSTIFKRADQALYVAKHNGKNQVMVG 1068 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 5/171 (2%) Query: 242 QKRLEEQ---LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 Q RL+E L+ DA+TG+ NRR F + SLL++D D FK + Sbjct: 184 QTRLKEANACLQEMVTTDALTGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFKRV 243 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND GH GD+VL +A+TL+ R D+V R+GGEEFV++LP T + A++ AE +R++ Sbjct: 244 NDTLGHEAGDDVLRLVAQTLQFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLRLN 303 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESID-ELFKRVDDALYRAKNDGRNRVL 408 +A +S G P TVSIGV G+ + EL D ALYRAKN GRNRVL Sbjct: 304 IANLSWRGHP-LTVSIGVDSGSGSGKTECELVAHADAALYRAKNSGRNRVL 353 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 116/218 (53%), Gaps = 6/218 (2%) Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAA 253 L GG F ++ DGS + P+ L + + D+TE KRL+E+L A Sbjct: 224 LDGGEWHGEFCNRRKDGSLYWEKCSIAPVRSPTGLLTHFVALKEDVTETKRLQEELTRLA 283 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D++TG+ NRR F ++ ++L++D D FK IND YGH+ GD L A Sbjct: 284 SQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAVLMLDVDHFKKINDEYGHAAGDAALKA 343 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA--KVSISGLP-RF 370 LA T S R+ DL R GGEEF +L P L+ A AE +R+++A K++I G Sbjct: 344 LADTCRSTLRETDLFGRLGGEEFGILFPGDDLNAATEAAERLRLAIAATKITIGGATIAI 403 Query: 371 TVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRNRV 407 T S+G++ +G +SID R D ALY AK GRNR+ Sbjct: 404 TASLGLSLLQDGEKSIDAALSRADQALYVAKQAGRNRL 441 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 5/183 (2%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 ++ HDITE+K+ E++LE A DA+T L NRR FY + E ++ + +L+++D Sbjct: 487 IVVAFHDITERKKFEQELERRAQIDALTSLNNRRHFYELAEQEILRTKRYGKPLALMMLD 546 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND YGH GD VL L R+ D++ R GGEEF +LLP A Sbjct: 547 VDHFKDINDTYGHHVGDTVLQTLGAVCLQTMREIDIIGRLGGEEFAILLPEATAAQAFDA 606 Query: 352 AETIRVSVAKVSI----SGLPRFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNR 406 AE +R++VA +++ FT+SIGV +S I ++ KR D+A+Y+AK GRNR Sbjct: 607 AERLRLAVAAIAMPLEQGQTLSFTISIGVTGLVAKDSDIADMLKRADEAMYQAKRSGRNR 666 Query: 407 VLA 409 V + Sbjct: 667 VCS 669 >UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IH0_THICR Length = 349 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 8/172 (4%) Query: 244 RLEEQLEHA---AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 RL+++L+ A A D +T + NRR F I E + ++LL++D D FK +ND Sbjct: 172 RLKKELDKATAIAKTDELTNIPNRRGFNEIIENMMKEANEKQSSFALLVLDIDFFKKVND 231 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH GD +L LA++L + + D + R GGEEFV +LP T D+AL LA TIR +A Sbjct: 232 TYGHLVGDSILRYLAKSLHNETKGKDSIARIGGEEFVAILPSTSYDSALKLANTIREKIA 291 Query: 361 K----VSISGLP-RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 V + P T+SIGVA + NE++D LF R D LY AK++GRNRV Sbjct: 292 SRPLHVKNNANPITLTISIGVAMFQLNETLDSLFTRADKCLYMAKSNGRNRV 343 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/172 (44%), Positives = 97/172 (56%), Gaps = 15/172 (8%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDTDRFKHINDLY 302 E L AA D +T L NRR + E H+ AQ+ SLL++D DRFK ND Y Sbjct: 199 ENLSLAAMTDQLTSLYNRRAY----EIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFNDTY 254 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR------ 356 GH GD+VL +A L+ C R D V R+GGEEFV+LLP T AL +AET+R Sbjct: 255 GHQIGDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISER 314 Query: 357 -VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +++ K L TVSIG+A + + + LF R D ALY AK+DGRN V Sbjct: 315 HLTIGKDKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAKSDGRNCV 366 >UniRef50_A5L069 Sensory transduction/ GGDEF family protein n=2 Tax=Vibrionales RepID=A5L069_9GAMM Length = 416 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/250 (35%), Positives = 123/250 (49%), Gaps = 29/250 (11%) Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA-DGSTRHVQTYAGPIE 225 N E++CQ++ IS P G N V + DG R Y I Sbjct: 180 NVESICQRYQ--------------AVISGEPSGTS--NVVENIGLDGVHRFFNIYDNAII 223 Query: 226 IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY 285 G+ M ++ D+T++ LE QL H A++D MT LLNRR Y + + Sbjct: 224 WEGEPAMQVVLEDVTQKVMLERQLVHQANYDEMTDLLNRRAIYEWFR----EQMTSDNHL 279 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALAR-TLESCARKGDLVFRWGGEEFVLLLPRTP 344 +L+D D FK IND YGH GDEV+CALA T S G + RWGGEEF++ +P Sbjct: 280 VCMLLDIDDFKSINDTYGHMVGDEVICALANITKRSVESVGGVAGRWGGEEFIVFIPNAT 339 Query: 345 LDTALSLAETIR--VSVAKVSISGLPRF--TVSIGVAHH---EGNESIDELFKRVDDALY 397 + + ++E IR + A+ I RF +VSIG++ E +ID L D +LY Sbjct: 340 AEMSCEISEQIRQQFNQAEFKIDEQTRFNSSVSIGMSDSLACEERMTIDALVNLTDQSLY 399 Query: 398 RAKNDGRNRV 407 RAK +G+N V Sbjct: 400 RAKANGKNCV 409 >UniRef50_A8FUM2 Putative uncharacterized protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FUM2_SHESH Length = 634 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 8/177 (4%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF--YHITEPGQMQHLAIAQDYSLLLID 291 + HDIT++K ++E + D +TGL NRR+ I E + + +S++L+D Sbjct: 460 SVSHDITDRK----EIERLSVTDTLTGLNNRRRLDELFINEFDRFNRYE--RQFSMILLD 513 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK +ND +GH GD+VL + L S RK DL+ RWGGEEF+L+ P T +D A+ L Sbjct: 514 VDHFKQVNDKFGHKVGDKVLIEMGEILASSVRKNDLLGRWGGEEFLLICPETSIDGAIDL 573 Query: 352 AETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 AE IR + + T S GV ++S +++F R D+ALY AK DGRN V+ Sbjct: 574 AEKIRKIIEDTDFPEIGSVTASFGVTVSIKDDSDEDMFIRADNALYTAKRDGRNCVV 630 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 94/163 (57%) Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 ++E+ + A D +TG+ N+ +F H+ + + + SL++ D D FK IND +GH Sbjct: 334 IKERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGH 393 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD VL LA+ + S R D RWGGEEFV+L P T L+ A LAE IR ++ + Sbjct: 394 QAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPF 453 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + T S GV N+++D KR D ALY+AK+ GRNRV Sbjct: 454 ETVGKVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNRV 496 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 94/163 (57%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 ++L + A D++T + NRR ++ +L++ID D FK +ND YGH Sbjct: 324 QKLNNLASKDSLTNIFNRRIIDEFISKETIKSKRYNNSLALIMIDIDHFKEVNDKYGHQV 383 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEV+ +L + R+ D+ RWGGEEF++LLP T L+ A +A+ IR V + Sbjct: 384 GDEVILSLVDIISKNIRESDIFGRWGGEEFIILLPETNLNQATIVAQNIRKKVQEYRFDK 443 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + T+S+GV+ N+ KRVDDALY+AK GRNRV++ Sbjct: 444 VGQKTISLGVSEFNSNDDSTVFIKRVDDALYKAKATGRNRVVS 486 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 11/165 (6%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITE---PGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 +L AH D +TGLLNRR Y E P Q AI +ID D FK +ND YGH Sbjct: 361 KLSLQAHTDPLTGLLNRRGIYESIELILPKSNQVAAI-------VIDIDHFKRVNDTYGH 413 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 + GD+V+ LA++++ +R+ DL+ R GGEEF+ LLP T + A+ +AE +R V K+ + Sbjct: 414 NIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDIAERLRKKVEKMPL 473 Query: 365 SGLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVL 408 T+S+GV G E ID + K DDALY+AK++GRNRV+ Sbjct: 474 PIPENITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNRVV 518 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 5/185 (2%) Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 +L++ + D+TE + E QL A D MT L NRR F + + + + ++ SL++ Sbjct: 648 ELLIGVNWDVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVM 707 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D D+FK +ND YGH GD VL A+A T + R D++ R GGEEF + LP T L A+ Sbjct: 708 FDVDKFKAVNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAM 767 Query: 350 SLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGR 404 LAE +RV + + S+ G+ FTVS+GVA + + +D L K D ALY AK +GR Sbjct: 768 LLAERLRVVLEEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGR 827 Query: 405 NRVLA 409 NRV A Sbjct: 828 NRVEA 832 >UniRef50_D2C2R9 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2C2R9_DICD5 Length = 501 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 98/168 (58%), Gaps = 3/168 (1%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 + +LE A D +TGL+NR+ F +I +M+ A + +S++LID D FK IND YGH Sbjct: 333 QRRLELMATTDKLTGLMNRQAFEYIFRTLRMKQSAQQRTFSIILIDLDFFKKINDQYGHH 392 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD VL AR ++ RK D RWGGEEFVLLL L A +AE IR +V +S Sbjct: 393 IGDRVLVKTARLIQRAIRKTDSACRWGGEEFVLLLGDCSLHQAHRVAEKIRQAVHFALVS 452 Query: 366 ---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + T+S GVA ESID L +R D ALY+AK GR++ + A Sbjct: 453 HRHQVINLTISCGVAESNPGESIDHLVQRADKALYQAKRQGRDQAVMA 500 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%) Query: 196 LPGGHKPLNFVHKLADGSTR--HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHA- 252 + G H F + DG+ R HV Y P E + DIT+ K++E +L+ A Sbjct: 44 MKGAHVEDTFRLRRPDGAERWLHVHRYQVPDEDGRVSRVAGTAVDITDLKQVELELQRAN 103 Query: 253 ------AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 A++D +TG+ NR F + + ++L++ D D FK +ND +GH+ Sbjct: 104 AELKRQAYYDRLTGVANRHYFETLLNRELARADRYGAPFALVMFDLDHFKRVNDTFGHAA 163 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GD VL + R + R D++ RWGGEEF++LLP T A +AET+R V Sbjct: 164 GDVVLQEVTRVIAERLRDADVLGRWGGEEFMVLLPGTQEADAARVAETMRARVEGHDFPE 223 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 R T+S+GVA E L +RVD+ALYRAK +GRNRV A Sbjct: 224 AGRVTISLGVAAFCAGEPRTGLLRRVDEALYRAKGEGRNRVAVA 267 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 97/160 (60%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +L A D +TGL NR + + + + + + + S++ ID DRFK IND YGH G Sbjct: 173 ELNALAITDKLTGLYNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIG 232 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D+VL + ++ L++ RK D+V RWGGEEF+++ ++ +L LAE +R + S + Sbjct: 233 DKVLQSFSQVLKNNIRKTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYI 292 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 T S GVA E +SID L +R D ALY+AK++GRN+V Sbjct: 293 KELTASFGVASFEDGDSIDSLVERADKALYKAKHNGRNKV 332 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/173 (45%), Positives = 102/173 (58%), Gaps = 7/173 (4%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E KR E L + D +T L NRR + + + SL+++D D FK IND Sbjct: 130 ELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKIND 189 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH +GD VL LA + R DL R+GGEEFVLLLP TP+ ALS+AE +R+ V Sbjct: 190 TYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQ 249 Query: 361 ----KVSISGLPRFTVSIGVAHHEGN--ESIDELFKRVDDALYRAKNDGRNRV 407 + S+ GL T+S+GVA + + ESID LF++ D+ALYRAK GRNRV Sbjct: 250 EHVFEGSLGGLV-ITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRV 301 >UniRef50_C1SNU0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNU0_9BACT Length = 622 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 4/177 (2%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 ++H+ITE+K++EE + D +TGL NR + + + ++++ + ++D D Sbjct: 450 AVIHNITEKKKIEE----LSITDRLTGLYNRHKLDAVLKAERIRNERHNTRFCAAILDAD 505 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK +ND YGH GD+VL LA ++ R+ D RWGGEEF+++ T + LA+ Sbjct: 506 HFKRVNDTYGHQVGDDVLVKLAAIIKENTRESDFCGRWGGEEFLVVALETDITNTAFLAD 565 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R +V + + + + TVSIGVA + E+I R D+ALY+AK GRNRV++A Sbjct: 566 KLRKAVEETDFTPVEKVTVSIGVAEYSRGETIAHFINRADEALYKAKQTGRNRVVSA 622 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 103/181 (56%), Gaps = 11/181 (6%) Query: 238 DITEQKR-------LEEQLEHAAHHDAMTGLLNRRQFYHI--TEPGQMQHLAIAQDYSLL 288 DIT QK+ + E LE A DA+TG+ NR +F +E + + +A SL+ Sbjct: 250 DITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVA--LSLI 307 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 L D D FK +ND YGH GD VL LAR + S R+ D+ RWGGEEFV+ P T L++A Sbjct: 308 LFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESA 367 Query: 349 LSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + LAE +R + + TVS GVA +++ L R D+ALYRAK GRN+V+ Sbjct: 368 IKLAEKLRSKIENYVFPAPKKITVSFGVATFRSSDNDITLVNRADEALYRAKEGGRNQVV 427 Query: 409 A 409 + Sbjct: 428 S 428 >UniRef50_UPI0001B57A43 diguanylate cyclase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A43 Length = 420 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 106/170 (62%), Gaps = 8/170 (4%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHIT--EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 ++QL+ A D TGLLN ++ + E + + +++L+ID D FK IND YG Sbjct: 249 KQQLQVAVVTDEKTGLLNTAGWHELATREFTRARRRGAGSGFAVLMIDLDHFKRINDTYG 308 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GDEVL A+A +E+ R+ D V R+GGEEFV+LLP T L +AE +RV+V +++ Sbjct: 309 HLTGDEVLAAVAVAIEASVRQSDTVGRFGGEEFVVLLPATGGTDVLGIAERVRVAVGELT 368 Query: 364 IS-GLP----RFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRV 407 +S G P +VS+GVA + + ++DE+ + D ALYRAK+ GRNRV Sbjct: 369 VSVGGPLRISGLSVSVGVACYPQAGTTLDEVLRSADAALYRAKDAGRNRV 418 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/185 (44%), Positives = 102/185 (55%), Gaps = 9/185 (4%) Query: 235 IVHDITEQKRLEE--------QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 +V D TEQ R QL A +DA+TGL NR + ++H Y+ Sbjct: 397 MVADRTEQLRESNRLLVQKAAQLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYA 456 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 +LL+D D FK +ND +GH GD VL +A L AR D V R+GGEEF+LLLP T D Sbjct: 457 VLLLDVDHFKRVNDTHGHDAGDRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDAD 516 Query: 347 TALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDEL-FKRVDDALYRAKNDGRN 405 A LAE IR SV + + R T+SIG+A +S E+ KR D ALYRAK GRN Sbjct: 517 GAAVLAEKIRASVEQSQAPDVGRVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRN 576 Query: 406 RVLAA 410 RV AA Sbjct: 577 RVEAA 581 >UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3T8_LEPCP Length = 366 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 98/170 (57%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 +I ++K +E +L A DA+TG+ NRR F + + SLLL D D FK Sbjct: 193 EIEQRKLVEAELSRIAITDALTGVWNRRHFEQTIGAERAKAQRHHTPLSLLLFDVDHFKA 252 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH GD+VL LAR + R GD++ RWGGEEF ++L P AL LAE +R Sbjct: 253 LNDQFGHQAGDQVLTELARLVGRSLRDGDVLARWGGEEFAVILHHCPAADALRLAEKLRG 312 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 VA + + T S GVA + +E++D F+RVD ALY AK+ GRN V Sbjct: 313 LVAGHAFDRVGTVTASFGVAELQPDETLDAWFRRVDLALYAAKSGGRNAV 362 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 93/161 (57%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +LE A D +TG NRR + H+ +++ SL++ D D FK +ND YGH G Sbjct: 449 ELERLASIDKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAG 508 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D VL + R + S RK D+ R+GGEEF+++ P T AL LA+ IR + + + Sbjct: 509 DAVLSDVGRIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEV 568 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 T+S+GVA N+ ++ + KR DDALY AK +GRNRV+ Sbjct: 569 GHKTISLGVATLIANDEVENIIKRADDALYIAKKEGRNRVV 609 >UniRef50_A3QHE1 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=A3QHE1_SHELP Length = 362 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 1/162 (0%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +++ A D +TGL NR + E +Q +SLL++D D FK IND +GH G Sbjct: 190 KIQKLAETDKLTGLYNREKLDITLEEYVLQSRHRQTPFSLLILDVDYFKQINDAHGHLTG 249 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D VL LA +L S R+GD + RWGGEEFV+LLP T L +++AE +R +A G Sbjct: 250 DRVLVQLADSLRSLCREGDFLARWGGEEFVILLPETQLSICVAVAEQLRQDIAAQKFDG- 308 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 T+S+G A +++ L R D+ALY+AK+ GRNRV+A Sbjct: 309 QSLTISLGAAQLREDDTTKTLVNRADNALYQAKHTGRNRVVA 350 >UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1L9_PELCD Length = 367 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 105/298 (35%), Positives = 151/298 (50%), Gaps = 25/298 (8%) Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI-NMLGRRVMPIMH 191 + F ++S P+ ++ +DG IV AN A L H+ + ++ + R Sbjct: 65 QIFSSSSDPIWVV--RQDGTIVRANSAMLRLLNRTHDAVVGHACHDVFDFCSRDSARCPL 122 Query: 192 EISHLPGGHKPLNFVHKLADG-STRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 +HLP + A G S ++ + A + + G ++ DIT +KR E LE Sbjct: 123 TQAHLPQSFHEWDIECPNAKGESDFYMVSTASLVTLDGSPGIVGHFRDITIRKRAEAALE 182 Query: 251 -------HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD---YSLLLIDTDRFKHIND 300 H A DA+T + NRR F E Q + +A++ SL+L D D FK ND Sbjct: 183 QANTALSHLARVDALTQIPNRRAF---DEALQAEWGRLAREEGPLSLVLCDIDCFKKYND 239 Query: 301 LYGHSKGDEVLCALARTLESCARK-GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 YGH GD+VL +A L CAR+ DL R+GGEEF LLLP+TPL+ ALS+AE R +V Sbjct: 240 HYGHQAGDKVLRRVAEALADCARRPADLASRYGGEEFALLLPQTPLEGALSVAEKARQAV 299 Query: 360 AKVSI-----SGLPRFTVSIGVAHHEGNESI--DELFKRVDDALYRAKNDGRNRVLAA 410 +++ S P T+S+GVA + I L + D ALY+AKN RNRV+ A Sbjct: 300 EDLALQHPTSSVKPILTLSLGVASVIPSLHIAPTTLIESADKALYQAKNADRNRVVPA 357 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 100/176 (56%), Gaps = 3/176 (1%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 I+ D TE + +E+L A D +TGL NRR+F E +H +L+ ID DR Sbjct: 532 IITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDR 591 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK +ND +GH+ GDEVL ALA + R D V R GGEEF +LLP T + A+++AE Sbjct: 592 FKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAER 651 Query: 355 IRVSVAK---VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +R V ++ +G T+S+GV+ + D L + D ALYRAK GRNRV Sbjct: 652 LRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRV 707 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG-----R 184 Y + F +SA MLL+D + G I++ N AA FYGY +C +I LG R Sbjct: 47 LYEQLFRYHSAVMLLVD-AETGCIIEGNPAASTFYGYPDGALCGMSINDIANLGPEEQAR 105 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 R+ + G H+LA G R V+ ++ P+ ++ L+ I+HDIT++ R Sbjct: 106 RLAELRE------GRLTCFTSRHRLASGEVRDVEVHSVPVRLFERTLLYTIIHDITDRVR 159 Query: 245 LEEQLEHAAHH 255 EE L + H Sbjct: 160 AEEALRRSEQH 170 >UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9B2_MAGSA Length = 352 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 27/226 (11%) Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKLMLC-IVHDITEQ--KRLE-------------E 247 +F KLADG + AG E+ L ++ D+ Q +RLE + Sbjct: 117 DFSGKLADGPS-----AAGLSELISGILAETKVMADLNRQLEQRLENSSNEVARLRNHLD 171 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 L+ A DA+T L NR+ F H + A SLL+ID D FK ND YGH G Sbjct: 172 DLKREASTDALTQLANRKLFDHSLNLAVLDARAADAPLSLLMIDIDHFKQFNDTYGHQLG 231 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG- 366 D+VL +AR+L A+ D R+GGEEF ++LP TPL+ ++ +AETIR V+ ++ Sbjct: 232 DQVLKLVARSLSEVAQAKDTAARYGGEEFAVILPATPLEKSMEVAETIRNQVSTKRLTNR 291 Query: 367 -----LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 L + T+SIG A E+ D L R D+A+Y AK DGRNRV Sbjct: 292 RTGQVLGQVTLSIGAALLREAEAPDSLVHRADEAMYLAKRDGRNRV 337 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 211 DGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 +GS+ V P++ D+++ I HDIT++KR+EE + D +T L NR + Sbjct: 399 NGSSYWVDVSISPVKNEKDEIISYTAIRHDITDKKRIEE----LSITDRLTQLYNRLKLD 454 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 I ++S+++ID D FK +ND +GH GD+VL A +++ AR+ D+V Sbjct: 455 EIFAMKLATAGRYNTNFSVIIIDIDYFKLVNDTWGHQAGDDVLREFAEIIKNNARETDIV 514 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDEL 388 RWGGEEF++L T LD A+ L+E +R V+ + S T S GV+ + + + Sbjct: 515 GRWGGEEFLILSSDTDLDGAIKLSEKLREMVSLFNFSFAGYKTASFGVSSYHPGDDEKTM 574 Query: 389 FKRVDDALYRAKNDGRNRVLA 409 KR D+ALYRAK +GRNRV A Sbjct: 575 VKRADEALYRAKENGRNRVEA 595 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 15/194 (7%) Query: 224 IEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE-----PGQMQH 278 +EI G+ L +DI+ +K +E++L A D +TGL NR F H E + +H Sbjct: 332 LEIDGEPATLIWCYDISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRH 391 Query: 279 LAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVL 338 +A L++D D FK+IND +GH GD L +A TL R+ DL+ R GGEEF Sbjct: 392 PCVA-----LMLDIDHFKNINDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAA 446 Query: 339 LLPRTPLDTALSLAETIRVSVAKVSIS---GLP-RFTVSIGVA-HHEGNESIDELFKRVD 393 LLP LD AL +AE +R V + +S G P R TVSIGVA + + ++ L R D Sbjct: 447 LLPEVSLDQALDVAERLRAGVEALRVSNPDGEPLRMTVSIGVALRRDAGDDLESLLVRAD 506 Query: 394 DALYRAKNDGRNRV 407 ALY+AK+ GRNR Sbjct: 507 SALYQAKSGGRNRT 520 >UniRef50_C1CZJ2 Putative regulator protein, GGDEF domain; putative membrane protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZJ2_DEIDV Length = 361 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 1/166 (0%) Query: 246 EEQLE-HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 E Q E A + D +T + NRRQ Q + + ++L D DRFKHIND YGH Sbjct: 196 EAQSEARAGYLDVLTNVANRRQLMLWLTSRQNRAETTGEPLCVILFDLDRFKHINDTYGH 255 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GDEVL A + R+G L RWGGEEF+++LP T A +AE IR SVA+V Sbjct: 256 DYGDEVLKRTAAAVAGALRRGTLFGRWGGEEFLVVLPATARGEARGVAERIRHSVAEVRY 315 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + TVS+GVA + E++ L KR D+A+Y AK+ GRN+V AA Sbjct: 316 DLPVQVTVSLGVAQAQPGENLQALLKRADEAMYAAKHAGRNQVQAA 361 >UniRef50_B3E5T6 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E5T6_GEOLS Length = 637 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 7/205 (3%) Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLMLCIVH--DITEQKRLEEQLEHAAHHDAMTGLLNR 264 H +G R V+ + P++ ++ CI + D+TE+++LE+QL+ A D +TG NR Sbjct: 427 HYTENGEQRIVEVHGYPMQDEQGEITQCIEYAVDVTERRQLEQQLQRLAETDPLTGTANR 486 Query: 265 RQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 R+FY + + L + S+L++D D FK IND GH GD +L L L R Sbjct: 487 RRFYDVLTVEISRSLRHGRQLSVLMLDLDNFKEINDTNGHDTGDRILSRLVALLGDVLRT 546 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA---KVSISGLPRFTVSIGVAHHEG 381 DL+ R GG+EF++L P T A LAE + V+V + ++G + +VSIG A Sbjct: 547 SDLLGRSGGDEFLILAPETDAVEARMLAEKLLVAVREGLRDPLAG--QVSVSIGAATLLN 604 Query: 382 NESIDELFKRVDDALYRAKNDGRNR 406 + D+L KR D ALYRAK GRNR Sbjct: 605 GDGPDDLVKRADQALYRAKQYGRNR 629 >UniRef50_Q2B6Y4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B6Y4_9BACI Length = 532 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 9/209 (4%) Query: 206 VHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 +HK + + ++Q ++ PI+ +L I+ +IT++ L ++LE A D +TG+ N Sbjct: 316 IHKFENEAETYIQIHSFPIKKSSGELAGTTVILSNITQEVLLRQKLEELAFKDGLTGIYN 375 Query: 264 RRQFYHITEPGQM--QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 R Y I + G++ + A S++L D D FK+IND YGH +GDE L +AR S Sbjct: 376 RT--YFIEQSGRLLKEAEAAGGTMSVILFDIDYFKNINDQYGHLQGDEALRHIARVSGSL 433 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV---SISGLPRFTVSIGVAH 378 G + R+GGEEFV+ LP L++A AE IR + +V S +G+ T S G A Sbjct: 434 LGGGSIFARYGGEEFVICLPGADLESAADQAEKIRAGIEEVFLPSETGMISLTASFGAAE 493 Query: 379 HEGNESIDELFKRVDDALYRAKNDGRNRV 407 +++ L D ALY++KN GRNRV Sbjct: 494 AAPGMTLERLLHNADTALYQSKNGGRNRV 522 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 9/177 (5%) Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDT 292 + +++ K+L +QLE A +D +T + NR +F +I + + + ++ Y SL+ +D Sbjct: 578 YQLSKIKKLSKQLETMAFYDKLTNIYNRAKFKNILK----EFIEYSKRYKTPLSLIFLDI 633 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FK IND +GH KGD VL + + + R+ D+ RWGGEEF++LLP T ++ A +A Sbjct: 634 DYFKKINDNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVA 693 Query: 353 ETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 E IR ++ G+ + TVS+GV + +++I+ R D ALY+AK +GRNRV+ Sbjct: 694 EKIRDAIESHDFDGI-KVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVV 749 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 94/163 (57%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 + E A D +TGL NR +F I E + + S++L D D FK IND YGH G Sbjct: 323 KFEEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIG 382 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D VL LA+ ++ RK D RWGGEEF++L P T A ++AE +R +V + + Sbjct: 383 DVVLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEV 442 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + T+S+GVA + NESID+ K+ D+ALY +K GRN+ A Sbjct: 443 GKVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_B9QV28 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QV28_9RHOB Length = 273 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 12/185 (6%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 ++ + L EQ A D +T + NR F + S+ L+D D FK Sbjct: 77 EVKARAELAEQFRMQAITDGLTQVFNRGHFLELCNHELKARSRTEAPLSVALLDIDHFKS 136 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND YGH+ GDE L +ARTLE+ R+ D+V RWGGEEF LL+PRT + A LA+ +R Sbjct: 137 VNDTYGHAAGDEALRVVARTLENSLRQSDVVCRWGGEEFSLLMPRTNSENASGLADRLRK 196 Query: 358 SVAKVSIS-GLPRF--TVSIGVA---------HHEGNESIDELFKRVDDALYRAKNDGRN 405 +++++ I G F T S GVA G ++ID LFK DDALY+AK+ GRN Sbjct: 197 TLSEIVIKEGGTSFSLTASFGVATMAGPNPACKATGADAIDLLFKDADDALYKAKDAGRN 256 Query: 406 RVLAA 410 +V+ A Sbjct: 257 KVITA 261 >UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms RepID=B6BNQ1_9PROT Length = 565 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 17/222 (7%) Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 S L G + F L + R++ TY+ C+ E + ++ QL A Sbjct: 353 SFLAGAFIEIIFFTLLL--TNRYLDTYSAN---------KCLTMQTKELQEIKAQLTIEA 401 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D ++GL NRR F +++ +Q ++ S++L+D D+FK IND YGH GD V+ Sbjct: 402 KTDLLSGLHNRRYFSEMSQKSFLQAKRYEENLSIILLDLDKFKKINDTYGHQTGDIVIKV 461 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----SGLPR 369 A L+ R+ D+V R+GGEEF++LLP T L AL +AE IR + I + Sbjct: 462 TADILKYLNREDDIVARYGGEEFIILLPHTNLYEALVIAENIRKKIESTEIHSESDDIFH 521 Query: 370 FTVSIGVAHHE--GNESIDELFKRVDDALYRAKNDGRNRVLA 409 T SIGVA + +E+I + +R D+A+Y+AK GRN+V + Sbjct: 522 VTASIGVAQLDTINDENISKTIQRCDNAMYKAKQRGRNKVFS 563 >UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1R3_DESRD Length = 457 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 11/217 (5%) Query: 200 HKPLNFVHKLADGSTRHVQTY------AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 H + F + DGS V A P ++ DK ++ +V DI+ +K EEQL A Sbjct: 234 HSQVEFELRRVDGSPVWVSVSGKALDDATPPDL--DKGVIWMVDDISTRKEAEEQLARIA 291 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D++T + R+ F + QHL ++ ++ ++D D FK IND YGH GD L Sbjct: 292 TTDSLTNVSTRQHFMELANRALAQHLRNSRPLTVCMLDIDHFKQINDTYGHGTGDRALAW 351 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV---AKVSISGLPRF 370 A T+ R D++ R+GGEEF ++LP T D A +A IR +V + + S +P Sbjct: 352 FAETVSGELRATDIIGRFGGEEFCIVLPETDQDEAQQVAHRIRTAVTGGSSAAASPIPPI 411 Query: 371 TVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 TVSIG+A + S++ + + D ALY AK GRNR Sbjct: 412 TVSIGIALADTPASMEAVIQLADRALYAAKAKGRNRA 448 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 4/186 (2%) Query: 226 IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY 285 + G + +L I D+TE K L+ QLEH A++D +TG+ NRR F+ E + + Sbjct: 270 VQGSEGLLIIFTDMTEVKNLQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPF 329 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL 345 +++L+D D FK +ND YGHS GD+VL +A+ +S +L R+GGEEFVL + Sbjct: 330 TIILMDIDYFKKVNDTYGHSVGDQVLEQVAKVCQSQLHGHELFARYGGEEFVLGVKGYTE 389 Query: 346 DTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKN 401 + +LAE +R V ++I G T+S+GVA + +E++ ++ D ALYRAK Sbjct: 390 EEGAALAEQLRSEVEALTIHTPDGKITVTLSLGVAALTKEDEALYQILNHADQALYRAKE 449 Query: 402 DGRNRV 407 GRNRV Sbjct: 450 AGRNRV 455 >UniRef50_B6BNR7 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNR7_9PROT Length = 666 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 16/213 (7%) Query: 211 DGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEE--------------QLEHAAH 254 DGS V T PI + ++ I+ D+T +K LEE LE+ A Sbjct: 452 DGSPYWVDTVISPIFDSKNNIIEYDSIITDVTLKKVLEEFNKKLEIEVKERTIVLENLAI 511 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D +T + NR + +L + YS++LID D FK +ND YGH GDEVL + Sbjct: 512 TDKLTNIYNRLRLDQELSYNYKNYLRYDKIYSIILIDIDFFKKVNDTYGHQVGDEVLQKV 571 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 + ++ R D++ RWGGEEF+++ P T L+ A +L + IR ++ + + T+S Sbjct: 572 SFIMKELIRSTDILGRWGGEEFMIISPNTDLNGAYTLTQNIRSNIENTIFDSVNKVTISA 631 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 G+A N + + D+ALYRAK++GRNRV Sbjct: 632 GIAQINSNLDEKSIITKADEALYRAKDNGRNRV 664 >UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1P7_DESAD Length = 383 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 11/181 (6%) Query: 238 DITEQKRLEEQLEHAAHH-------DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 +I E+K+ E++L+ + D +TGL NRR + E + S++L+ Sbjct: 198 EIAERKKAEQKLKESEERFKNLSITDQLTGLFNRRHMLDVAEKEIFKSRNTGHPLSIMLM 257 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK ND YGH+ GD++L A+ + +++ R D FR+GGEEF+++LP T A+ Sbjct: 258 DVDDFKMFNDTYGHAAGDDILEAIGKIIKNNIRATDKAFRYGGEEFMVILPETNGLEAIK 317 Query: 351 LAETIRVSVAKVSI---SGLP-RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 +AE IR+++A+ G P T+SIGVA +ES++++ KR DD +YR K G+NR Sbjct: 318 VAENIRIALAEYEYHPKEGSPIHKTISIGVAEFTNDESLEKVIKRADDNMYRCKIKGKNR 377 Query: 407 V 407 V Sbjct: 378 V 378 >UniRef50_A4JR79 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=Burkholderia RepID=A4JR79_BURVG Length = 432 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 124/278 (44%), Gaps = 40/278 (14%) Query: 157 NLAALNFYGY--------------------NHETMCQKHTWEINMLGRRVMPI-MHEISH 195 N AA N +GY NH + + M R + P M E + Sbjct: 165 NRAAENLFGYKSAEVLGQRIEVLMPEKFRANHSRNVGRFADSVQMSLRSITPPRMDESNS 224 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHH 255 + G H+ DG+ V+ IE+ G +V DI E+ L L+ A Sbjct: 225 VYGRHR---------DGTVIPVEIAISKIEVNGVIEFTAVVRDIRERAELIALLKKQAVT 275 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 DA+TGL NRR+F + E + L S+ ++D D FK IND YGH GDEVL LA Sbjct: 276 DALTGLANRREFLNFVE----KVLGTDDLLSVFILDIDYFKKINDGYGHDIGDEVLRVLA 331 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-----F 370 + S + L RWGGEEFV LP +AET+R + R F Sbjct: 332 KVGMSIPHESGLFARWGGEEFVAALPGADAADVRRIAETLRRRFEEQDFEHAWRVKPIQF 391 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 TVSIGV E G +D L +R D ALY AK GRNR+ Sbjct: 392 TVSIGVVTREAGERDVDALMRRADRALYAAKESGRNRI 429 >UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XRL8_DESMR Length = 434 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 103/182 (56%) Query: 226 IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY 285 + G L ++ D+TE + +L A+ D +T LNRR+ + E + A + Sbjct: 242 LPGRARCLLMLADVTELELERRELLDLANRDPLTRTLNRRKLGDVLEAETARAARYATPF 301 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL 345 SL L+D D FKHIND +GH GD VL LAR + + R+ D + R+GGEEFV+ P L Sbjct: 302 SLALLDIDHFKHINDSHGHDAGDAVLVELARRITASLRQVDRLARFGGEEFVVAAPGIDL 361 Query: 346 DTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 A LAE +R +VA +G+ R T S G+A + ++L KR D ALYRAK+ GRN Sbjct: 362 AGAAELAERLRRAVADEPFAGVGRVTASFGLAAWRPGDKPEDLIKRADAALYRAKDGGRN 421 Query: 406 RV 407 RV Sbjct: 422 RV 423 >UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SB80_CHRVI Length = 317 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 147/301 (48%), Gaps = 30/301 (9%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALN-FYGYNH----------ETMCQKHTWEINMLG 183 ++ +S +++++ RDG I+DAN+A + F G+ + Q+ E + Sbjct: 21 YVMDSGRLVVVEVDRDGLILDANVAFRSRFAGFASVRGEPLARFLGSGSQQPDIEPGLPH 80 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGS----------TRHVQTYAGPIEIYGDKLML 233 R+ P+ + GG L + L D + V G + + +L+ Sbjct: 81 RQ--PVARVFKTVMGGENYLFHAYPLGDNALLIGERAGADDNDVIARMGNLTLEMSRLVR 138 Query: 234 CIV---HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 + HD+ + RL EQL A DA+T L NRR F G Q + S+L++ Sbjct: 139 DLRKANHDLEQANRLNEQL---ARTDALTQLPNRRYFMERLNHGVRQAQTRSHPLSVLMM 195 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK +ND +GH+ GD VL A A + + R DL R GGEEF L + L+ A+S Sbjct: 196 DLDHFKRVNDTFGHAAGDRVLVAFAELMRAQVRLSDLPGRLGGEEFGLYMFDAELEVAVS 255 Query: 351 LAETIRVSVAKVS-ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +AE +R V + + R +VSIGVA E ++L KR DD LYRAK GRNRV+A Sbjct: 256 VAERLRAHVNLMRPLDTDYRPSVSIGVAALAPGEDTEQLLKRADDGLYRAKETGRNRVIA 315 Query: 410 A 410 A Sbjct: 316 A 316 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 16/283 (5%) Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR---VMPIMHEISH 195 +AP+ ++ + DG+I+ N GY H+ + TW G+R + P+++ + Sbjct: 289 NAPLPIMIHAEDGEILQINDIFTELTGYTHDEIPTIDTWLEKAYGKRQNIIRPVINHLYD 348 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 L FV +D + + + P+E D ++++ + D+TE+K+ EE+L H A Sbjct: 349 LETKIDEGEFVIDTSDEKQKILNFNSAPLEQLSDGRRVVISMAIDVTERKKAEEKLRHNA 408 Query: 254 HHDAMTGLLNRRQFY-HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 HD +T L NR F + + + +++L ID DRFK IND GH GD VL Sbjct: 409 LHDTLTKLPNRLLFIDRLNQSIERIKRHPTYSFAVLFIDLDRFKLINDSLGHIIGDRVLI 468 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT---ALSLAETIRVSVAKVSISGLPR 369 +A L SC R D V R GG+EF++LL L++ A+ +AE I + K+ I R Sbjct: 469 QIATKLTSCVRSLDTVARIGGDEFIILL--NDLESKIKAIHIAERI-LETLKLPIIIEQR 525 Query: 370 ---FTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + SIG+A + + NE D++ + D A+Y+AK G+ R + Sbjct: 526 NIVISASIGIAFNSQNNEEADDIIRNADLAMYKAKEQGKARYM 568 >UniRef50_D0I2V0 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I2V0_VIBHO Length = 341 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/177 (42%), Positives = 99/177 (55%), Gaps = 17/177 (9%) Query: 244 RLEEQLEHA---AHHDAMTGLLNRRQFYHITEPGQMQHLAIA---QDYSLLLIDTDRFKH 297 RLE+ L A A HDA+TG+ NRR +++ L + +SLLL D D FK Sbjct: 167 RLEDTLHKANEEALHDALTGIYNRRAL-----DAELEALVATPPPKGFSLLLCDLDHFKR 221 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 ND YGH GD+VL A+ L R G +R+GGEEF LL+P PL A +AETIR Sbjct: 222 FNDTYGHLMGDQVLKLTAKRLSDYCRDGIKAYRYGGEEFALLVPNRPLSGACRVAETIRA 281 Query: 358 SVAKVSISG------LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 ++ K+++ L ++SIGVA E ESI +L R D LY AK GRNRV+ Sbjct: 282 TIDKLALKDKRTGKKLDNISISIGVAAFEHGESIRDLISRADTQLYDAKKLGRNRVM 338 >UniRef50_A6F6C4 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6F6C4_9GAMM Length = 347 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 7/167 (4%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 + +H A HD++TGLLNRR F E + + +++S+L++D D FK ND +GH G Sbjct: 178 ETQHDAMHDSLTGLLNRRVFSKEIETF-CSNPTLNRNFSILMVDIDNFKAFNDDFGHQLG 236 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG- 366 D+VL A+A+ + ++G+ VFR+GGEEFVL+LP A AE+IR ++ ++SI Sbjct: 237 DQVLKAIAKRIADSCQEGEQVFRYGGEEFVLILPNKTFTIARQNAESIRRAIERLSIRDK 296 Query: 367 -----LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + TVSIGV+ ++ ++ E+ R D LY AK GRNRV+ Sbjct: 297 RTGKVIDNITVSIGVSENKPRDTSHEILTRADLQLYEAKRLGRNRVM 343 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 111/184 (60%), Gaps = 8/184 (4%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD--YSLLL 289 +L I DITEQK+LE++L+ A DA+TG+LNRRQF + + + I +D SL++ Sbjct: 844 LLGISTDITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVI 903 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 ID D FK IND YGH+ GD+VL + R+ D+ R GG+EFVL+LP T A Sbjct: 904 IDIDHFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAY 963 Query: 350 SLAETIRVSVAKVSISGLPR----FTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGR 404 + + IR V + S+ LP+ T+S+G+A ++D+ +R D ALY+AK GR Sbjct: 964 QVMDRIRQLVIQQSLH-LPQQAIAITISVGIAVWTPEILTLDQFLERADRALYQAKQQGR 1022 Query: 405 NRVL 408 +R++ Sbjct: 1023 DRII 1026 >UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicola AmH RepID=B9L5Q2_NAUPA Length = 463 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 8/176 (4%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDTD 293 +I ++ +LEE+L+ + +D++T + NR Y I + Q + +A+ Y S++ D D Sbjct: 288 EIKKRHKLEEELKKISFYDSLTDIYNR---YKIDLSLKSQ-IELAKKYKIPLSIIFFDID 343 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK IND YGH GDEVL L++ ++ R+ D+ RWGGEEF+++LP T L TA +A Sbjct: 344 DFKKINDTYGHKVGDEVLIELSKLIKRNIRQTDIFGRWGGEEFIIILPNTDLTTATHIAN 403 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 ++ ++ + S + T S GV + N+S++ L R D LY AKN G+NRV++ Sbjct: 404 KLKKAIEEHSFPIIKHLTCSFGVTELKDNDSLNTLTVRADSFLYEAKNKGKNRVIS 459 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 3/167 (1%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 +QL+ A D +TGLLNR + E +H +SL+L D D+FK +ND YGH+ Sbjct: 199 QQLKSLASTDQLTGLLNRHAIHKSLEQLVARHARHGHPFSLILGDLDKFKRVNDSYGHNV 258 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL A L+ R GD++ RWGGEE +++LP T D+AL++AE +R ++ + ++ Sbjct: 259 GDEVLIETANRLQDHVRAGDILCRWGGEELLVVLPDTERDSALAVAEKLRCAIGEAPMTA 318 Query: 367 LPRF---TVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S GV + E ID R D ALY AK GRNRV++ Sbjct: 319 GGHSIEQTISFGVTCYHNGEHIDTTIMRADSALYLAKQGGRNRVVSV 365 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 16/227 (7%) Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI--VHDITEQKRLEEQLEHA--- 252 GG++ +F + S R + A P+ +++ I + D+TE++R EE L + Sbjct: 241 GGYEAEDFFPHFGE-SGRWLFFTAAPLRNGAGQVIGAIETLQDVTERRRAEEALRESEER 299 Query: 253 ----AHHDAMTGLLNRRQFYHITEPGQMQHLA-IAQDYSLLLIDTDRFKHINDLYGHSKG 307 + D++TGL N R H P +++ + SLL++D D FK +ND YGH G Sbjct: 300 YRSLSQTDSLTGLFNSRHL-HEQLPNELERAGRYGRPLSLLVLDCDNFKCVNDRYGHLGG 358 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D+VL +LA + C R+ D FR+GGEEFV+LLP T + AL++AE +R A + Sbjct: 359 DKVLQSLATAIGHCLRRSDFAFRYGGEEFVVLLPETAIQAALAIAERLRSQFASIETPAP 418 Query: 368 PR----FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 TVSIGVA ES L +R D+A Y AK G+N V+ A Sbjct: 419 SGDAICCTVSIGVAECVPGESEASLVRRADEACYMAKARGKNCVVMA 465 >UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2KVB5_BORA1 Length = 429 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 103/184 (55%), Gaps = 6/184 (3%) Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD---YS 286 K + ++ DI++ E+ L DA+TGLLNRR Q H A Q YS Sbjct: 242 KHYISVLKDISQFVAREKLLSKQVRSDALTGLLNRR---GAAAKIQRLHRAAHQSGRFYS 298 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 +++ D D FK IND +GH GD VL A + R+GD V RWGGEEF++LLP PL Sbjct: 299 VIMADIDHFKKINDQFGHLLGDTVLKRCANLIRDNVREGDAVARWGGEEFLILLPNCPLI 358 Query: 347 TALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 A++LAE IR ++A ++ + T+S+GV E+ L +R D ALY+AK GRN+ Sbjct: 359 KAVALAERIRNTIATLTDPITGQVTLSLGVGTSSPAETPQSLIQRADKALYKAKAQGRNQ 418 Query: 407 VLAA 410 V A Sbjct: 419 VAIA 422 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 152/293 (51%), Gaps = 18/293 (6%) Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 Q + Q RF LT A L++ GQI+DAN AL+ YGY + + ++ L Sbjct: 363 QLQHQMLSQRFDNLTRFANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDL 422 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 ++ + E + G + + DGST V+ A I++ L+ I+ DI+E+ Sbjct: 423 SQQECDLFWEQLKVEQGVR-FETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISER 481 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ------DYSLLLIDTDRFK 296 K E+QL H A+HD +TGL NR LAIA+ LLL+D DRFK Sbjct: 482 KAAEDQLVHQAYHDPLTGLPNRLLI------SDRLKLAIAKARRHKTQAVLLLLDLDRFK 535 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 +IND GH+ GD +L LA+ ++ R D V R+GG+EF++LL L +SLA+ + Sbjct: 536 NINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKL 595 Query: 356 RVSVAK-VSISGLPR-FTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDGRN 405 V++ V I G T S+G++ E + +D+L + D A+YRAK GRN Sbjct: 596 SDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRN 648 >UniRef50_A6C9P7 Probable response regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9P7_9PLAN Length = 691 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%) Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ-----KRLEE--QLEHAA 253 KP+ L R + + ++GD L V +I KR +E L+ AA Sbjct: 327 KPMTTEFMLERPGGRLINIEVQSVPMFGDDGRLIGVTEIFRDLSRSLKRPKEYNDLKLAA 386 Query: 254 HHDAMTGLLNRRQFYH--ITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 DA+T + NR + ++Q + SL+ ID D FK+IND YGHS GDEVL Sbjct: 387 SLDALTSVANRGELETQLAIMLSRIQKEQNPEPLSLIFIDADHFKNINDSYGHSTGDEVL 446 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP--R 369 LAR + G+LV R+GGEEFV+L P T L+ A+ AE +R++V+ + + R Sbjct: 447 VELARLFQHETYSGELVGRYGGEEFVILCPETALEHAVKKAERLRLAVSNLKMENQSNIR 506 Query: 370 FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 T S GV+ +E +S++ LF R D ALY+AK GRN+V A Sbjct: 507 VTASFGVSQYEPGDSLESLFHRADSALYQAKETGRNKVRA 546 >UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J0D1_COMTE Length = 458 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 205 FVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 F+++ DG H + ++ + I DI++ + E++L A+ D +TGL Sbjct: 222 FINRRKDGELYHAAQSISALRDARHRITHYVSISKDISDLVQREQELLVRAYRDDLTGLP 281 Query: 263 NRRQFYHITEPGQMQHLAIAQD--YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLES 320 NR + E Q +A Q Y+L++ D D FK +ND +GH GD+VL +A+ L + Sbjct: 282 NRSAGSYELE--NCQRIAERQGVPYALIMCDVDLFKQVNDQFGHEAGDQVLQQIAKVLRN 339 Query: 321 CARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHE 380 R + V RWGGEEF++++P L AL LAE +R S+A S + T+S GV + Sbjct: 340 TVRSSEHVARWGGEEFLIIVPGVGLQAALELAERLRRSIASHSYAAAGTITMSFGVGSWQ 399 Query: 381 GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E+ +L +R D ALYRAK+ GRN+V A Sbjct: 400 AGEASAQLLRRTDMALYRAKSSGRNQVRRA 429 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 95/160 (59%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +LE A D +TGL NRR+ + ++ + L+++D D FK +ND +GH G Sbjct: 173 ELEQIAIIDQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDFFKTVNDTHGHQIG 232 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D+VL A L+ R+ D++ RWGGEEF+++ P T D + LAE +R++V +++ G+ Sbjct: 233 DQVLQRFADQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEKLRIAVQSIAVPGV 292 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 T S GV +E +++D L +VD ALY AK GRNRV Sbjct: 293 GEKTASFGVTVYEKGDNLDTLVDKVDKALYLAKEKGRNRV 332 >UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IP8_THICR Length = 540 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 36/289 (12%) Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL-------- 196 I + G I + N AL +GY E ++G+ + ++ E H Sbjct: 253 IITNEKGIIENFNQIALQRFGYTAE----------ELMGQPIEILIPEGDHKRNHAHYME 302 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAG-----PIEIYGDKLMLCIVHDITEQKRLEEQL- 249 HK + F + T+H + + P++ D + I+HDI+++ +L EQL Sbjct: 303 SSSMHKKVLFKGRELKAITKHGELLSSEITVTPLKQSEDLKFVGIIHDISDRMKLMEQLG 362 Query: 250 ------EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 A D +TGLLNR+ F+ E + Q SLL+ID D FK IND +G Sbjct: 363 SLLNQLRDEATKDYLTGLLNRKAFFEQAEQIWLSAKEHHQPISLLMIDIDHFKRINDSFG 422 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GD VL +A R+ DLV R+GGEEF++LL L A ++ + ++S Sbjct: 423 HDAGDRVLIEVANVFSQNCREEDLVCRYGGEEFIILLENKDEQPTLEFASRLKKVIQEMS 482 Query: 364 IS---GLPRFTVSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNRV 407 +S + RF++S+GVA E SI+ D ALY+AK +GRNRV Sbjct: 483 VSEQGEVIRFSISVGVATGSALELNSIETFISHADQALYQAKANGRNRV 531 >UniRef50_B9LA95 Diguanylate cyclase n=1 Tax=Nautilia profundicola AmH RepID=B9LA95_NAUPA Length = 470 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/162 (42%), Positives = 93/162 (57%), Gaps = 11/162 (6%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +++ + D +T +LNR G + + DYS+L++D D FK IND YGH+ G Sbjct: 320 KMKRNSQIDYLTDILNR--------SGCLSKIKALDDYSVLVLDVDHFKQINDTYGHNVG 371 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 DE+L + + RK D+ RWGGEEFV++LP T +TA +AE IR +V L Sbjct: 372 DEILKRFVDVVRNTIRKNDIFCRWGGEEFVIILPDTDKETAKLVAEKIRKTVENTDFDNL 431 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + TVSIGVA E N +E FK D LY AK GRNRV+A Sbjct: 432 -KITVSIGVAQKEKN--FNETFKIADMKLYEAKELGRNRVVA 470 >UniRef50_A2SEJ2 Diguanylate cyclase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEJ2_METPP Length = 351 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/164 (45%), Positives = 99/164 (60%), Gaps = 11/164 (6%) Query: 253 AHHDAMTGLLNRRQF-YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A D++TGL NRR F HI + + A+ SL+L+D D FK +ND +GH GD+VL Sbjct: 176 AQTDSLTGLHNRRSFEQHIAKFLADREAAM----SLVLVDIDHFKLVNDTHGHLFGDQVL 231 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI------S 365 A+AR L+ R DL R GGEEF LLLP TPL A+ LAE IR S+A I Sbjct: 232 MAVARVLKESVRNDDLAARIGGEEFALLLPSTPLKGAVELAERIRTSIANSRIRRRNSEQ 291 Query: 366 GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + TVS+GVA +++ + F R D+ALY +K +GRNRV A Sbjct: 292 QVGQITVSLGVADLWPSDNGESWFSRADEALYASKREGRNRVTA 335 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 3/169 (1%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +TE R +L+ A D++TG+ NR + E + H SLLL D D FK + Sbjct: 520 LTEANR---RLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFKAV 576 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH GD+VL ALAR + R D + RWGGEEF++L + + A +LAE +R Sbjct: 577 NDQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLATNSAPEEAWTLAERLRQC 636 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +A + G+ T+S+GVA +++D L R D A+YRAK GRNRV Sbjct: 637 IAGLRFPGVGPVTISVGVASLSRGDTVDRLIDRADRAMYRAKQRGRNRV 685 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/180 (41%), Positives = 102/180 (56%), Gaps = 4/180 (2%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 ++ ++ DITE+KR+E +L A D +TG+ NRR F + + + L++D Sbjct: 396 VIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLD 455 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND +GH GD + ALA R D++ R GGEEF ++L T LD AL + Sbjct: 456 IDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLV 515 Query: 352 AETIRVSVAKVSIS---GLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRV 407 AE +R +VA + I G FT SIGVA EG+ +ID + R D ALY AK GRN+V Sbjct: 516 AERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKV 575 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 7/204 (3%) Query: 212 GSTRHVQTYAGPIEIYGDKLMLCI---VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 G RHV G ++ D M + + D+TE++ E +LE A+ D +TGL NRR F Sbjct: 362 GEERHVSLVCG-FDLLEDGSMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFL 420 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 + + + ++D D FK +ND +GH GD L +A+T+ R D+V Sbjct: 421 ECVRAEMTRSRRFGKSLCVAMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVV 480 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP---RFTVSIGVAHHEGNESI 385 R GGEEF +L P L ++ AE +R ++A+ + R TVSIG+A + G+ES+ Sbjct: 481 GRLGGEEFCVLFPEAGLAAGITAAERVRKALAEAVLEHGDLRLRLTVSIGLAEYSGDESL 540 Query: 386 DELFKRVDDALYRAKNDGRNRVLA 409 D L +R D+ALY AK G+NRV + Sbjct: 541 DGLLRRSDEALYEAKRTGKNRVCS 564 >UniRef50_C6HXZ0 Diguanylate cyclase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXZ0_9BACT Length = 348 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 8/166 (4%) Query: 251 HAAHHDAMTGLLNRRQF-YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 A+ D +TG++NRR F ITE + Q + + S+L ID D FK IND +GHS GD Sbjct: 180 QASSIDPLTGVINRRGFEMRITECLKAQE-SRQGECSVLFIDIDNFKKINDDHGHSVGDR 238 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----- 364 +L A+A+ L+ R D+V R+GGEEFV++LP TP+D A +AE IR +V ++++ Sbjct: 239 ILLAVAQVLKGKTRGDDIVARFGGEEFVVVLPSTPIDKAHIVAENIRQNVERIALLSAKD 298 Query: 365 -SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + TVSIG+ H+ ++ + +R D A+Y++K DG+NR A Sbjct: 299 NKTIGTVTVSIGIDVHKSGQAWQKTVERADQAMYQSKKDGKNRTTA 344 >UniRef50_B6ER50 Putative GGDEF protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ER50_ALISL Length = 413 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 6/202 (2%) Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DG +R Q + I+ G+ + + D+TE+ LE ++E A HD +TGLLNRR Sbjct: 208 DGESRFFQLFESVIDWDGELAVQSSIIDVTEKYHLERKIEFQAKHDDLTGLLNRRAITEF 267 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 Q +HL +Q + LLID D FK IND +GHS GD V+ A + + ++ R Sbjct: 268 LLKEQEEHLRPSQ--TCLLIDIDNFKLINDQFGHSAGDSVIQQFAELCSTFVKDNGVIGR 325 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNE-SID 386 WGGEEF++ P+ ++ A ++AE IR + +V TVSIG++ SI+ Sbjct: 326 WGGEEFIIFFPQLNVEQANNIAEKIRYACEEVHFIFNDIQHSITVSIGISTCLSTSCSIE 385 Query: 387 ELFKRVDDALYRAKNDGRNRVL 408 L + D+ +Y+AK G+N+++ Sbjct: 386 ALVQNADNNMYQAKQQGKNQIV 407 >UniRef50_A9DAY4 Periplasmic sensor diguanylate cyclase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DAY4_9RHIZ Length = 442 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 99/176 (56%), Gaps = 5/176 (2%) Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA-IAQDYSLLLIDTDRF 295 H I EE L A D +TGL NRR F T P M + ++LL ID D F Sbjct: 252 HMIGRIHEAEEVLSEMARRDELTGLANRRAF-EATLPDMMGRAKRFEEQFTLLAIDIDHF 310 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND +GH+ GDEVL A+ART+ R GD VFR GGEEF +LLPRT A AE I Sbjct: 311 KQVNDTHGHAAGDEVLRAVARTMMDTMRDGDRVFRVGGEEFAVLLPRTDGAPARLAAERI 370 Query: 356 R--VSVAKVSISGLP-RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 R V +A VS+ TVSIG+A +L + D ALYRAK++GRNR++ Sbjct: 371 RQAVEMAPVSLKATEIAVTVSIGMASTLDFPEKSDLLEAADAALYRAKHEGRNRII 426 >UniRef50_A1TTA7 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TTA7_ACIAC Length = 357 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 5/171 (2%) Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 R E +LE A D +TGL NRR+ + + Q A Q S+++ D D FK IND +G Sbjct: 187 RAERRLEEQACTDPLTGLSNRRRLAGLAQERIAQARAAGQPTSVVIADIDHFKRINDTHG 246 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV---- 359 H GD+VL +A +E +R DL+ RWGGEEF+L++P L A +LAE +R V Sbjct: 247 HEAGDQVLVHVAELMERSSRAHDLLARWGGEEFLLVMPSCGLGDAQALAERMRAIVAGHP 306 Query: 360 AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 A+ +P ++S+GVA G ES++ R D ALY +K GRNRV A Sbjct: 307 ARRDTQAIPA-SLSLGVAQLRGGESLEAAIARADQALYASKEAGRNRVTTA 356 >UniRef50_Q2L1W8 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2L1W8_BORA1 Length = 513 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 5/165 (3%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 ++L DA+TGL NRR + + H ++A ++ ID D FK +ND YGH+ Sbjct: 349 DKLNSDVAKDALTGLANRRVYEICINTWESYHRSVA----IIAIDIDHFKKVNDTYGHAV 404 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL L+ + SCAR D+V R GGEEF++L P D+A +AE IRV V++ + Sbjct: 405 GDEVLKKLSEIMSSCARAADVVCRIGGEEFLILAPAMSRDSAKEMAERIRVQVSEYDFNT 464 Query: 367 LPRFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLAA 410 + T+S+GVA + S + +L K DD LY+AK +GRNRV A Sbjct: 465 VGNITISLGVAVWPYDCSKLSQLSKMADDMLYQAKANGRNRVETA 509 >UniRef50_B3E7P2 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E7P2_GEOLS Length = 237 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 20/187 (10%) Query: 239 ITEQKRLEEQL-------EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SL 287 I E+ +L+ QL + A D MTGL NRR + E Q + A + S+ Sbjct: 55 IKEKAQLQTQLVNMNRSLDLATRIDPMTGLANRRAIMEMIE----QEFSRAHRHQRPASI 110 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 ++ D D FK +ND +G + GD+VL ++R L C R D+ RWGGEEF++LLP T LD Sbjct: 111 IMADLDYFKKVNDTHGFNTGDDVLVEVSRVLRGCLRNEDICSRWGGEEFLVLLPETQLDG 170 Query: 348 ALSLAETIRVSVA----KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDG 403 AL++A IR SVA KV+ G+ + T+S+GV ++ +++I E R D AL++AK G Sbjct: 171 ALAVANKIRESVAMTEFKVNRPGI-QLTISLGVCEYKPDQNIFEAISRADQALFQAKLGG 229 Query: 404 RNRVLAA 410 RNR + A Sbjct: 230 RNRAIVA 236 >UniRef50_Q1Z3E3 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z3E3_PHOPR Length = 622 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 109/396 (27%), Positives = 182/396 (45%), Gaps = 37/396 (9%) Query: 27 IYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEIL------TVQRK 80 I+ NSA+ +L + G YS S L DL D ++I+ +++ Sbjct: 251 IFPNSASNILTSKTFYGP---GVYSYS--------LGDLFGNKDNLKIIFTPKSGVMKKM 299 Query: 81 EEETALSCRLV-LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 + + LS L+ L L + P+ F I P+ L K S + + +K + Sbjct: 300 QNKNVLSASLIALTVLAVSFPLSWFASI-IPSRLQSKLSEAYDKIKKNAAVIDK------ 352 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI--MHEISHLP 197 ++++ RDG I N+ GY + + K ++ + +HE+ L Sbjct: 353 -HVMILSTDRDGVIKQVNMCFSETTGYATDEVIGKKQRDLRHRDTSLEAYDEIHELI-LT 410 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM---LCIVHDITEQKRLEEQLEHAAH 254 G +G+ V + P +I + ++ IV +IT++K +E + Sbjct: 411 GKVWEGELKETDKEGNDLWVHKFITP-DINANGMIDGFTTIVQNITDKK----NIELLSI 465 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D++TGL NR + + + D+S+++ D D FK IND YGH GD+VL L Sbjct: 466 TDSLTGLYNRYKLESVLSSESSRCERYQSDFSVIIFDIDFFKKINDTYGHLVGDDVLIHL 525 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 A+ L+ R D+ RWGGEEF+++ T L A AE +R+ + + + + T+S Sbjct: 526 AQLLKENTRITDVASRWGGEEFLIVACNTNLHEAFIFAEKLRIVIENYNFPSIGKMTISC 585 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 GVA + E+I EL R D ALY+AK G+N+V+ A Sbjct: 586 GVAQYINKETISELVSRADLALYQAKKMGKNKVIKA 621 >UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPY0_9GAMM Length = 209 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 6/178 (3%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DI+++K +E++L HD +TG+ NRR + + S++ +D D FK Sbjct: 33 DISDRKLMEDELRELTLHDPLTGVANRRLLQDEGQKELQRSQRTGAPLSMMAVDIDFFKA 92 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND YGH GD L +A +S R+ DLV R GGEEF +LLP T L+ A +LAE +R Sbjct: 93 VNDRYGHHIGDLALKKVAELCQSVTREYDLVSRTGGEEFTVLLPHTSLEQAHALAERMRC 152 Query: 358 SVAKVSISGLP----RFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++A+ S + L + TVSIGVA ++SI+EL + DDALYRAKN GRNRV+ A Sbjct: 153 AIAE-SCAVLNEHEIKLTVSIGVAALLSAHQSIEELSQLADDALYRAKNAGRNRVITA 209 >UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N942_9GAMM Length = 945 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 124/217 (57%), Gaps = 7/217 (3%) Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK-LMLCIVHDITEQKRLEEQLEHA 252 SHL +F+HK +G R + + + D ++L + D+T++KR EEQ+ Sbjct: 462 SHLAVSQLETDFIHK--NGDVRVISWLHSSLTVANDDAVILSVGLDVTDKKRSEEQMLWM 519 Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 A+HDA+T L NRR+F + Q ++ LL +D D+FK IND GH+ GD++L Sbjct: 520 ANHDALTELYNRRKFNSDFKKLLNQAQRYKREGMLLFLDLDQFKDINDSCGHNVGDQLLQ 579 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS-GLPRFT 371 +A++L + +R D+V R GG+EF ++LP T L A++L E I S+ + S R+T Sbjct: 580 RVAQSLLAISRSTDIVARLGGDEFAIILPETDLHGAITLCEKITDSLKNIDFSHEQARYT 639 Query: 372 V--SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG+ N ++DEL D A+Y+AK+ G+N Sbjct: 640 ISCSIGITKFPLNNLTVDELVSNADMAMYQAKSKGKN 676 >UniRef50_A8UWW7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWW7_9AQUI Length = 540 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 2/157 (1%) Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 A+ D++TG+ NRR F + L +++ S+L+ID D FK +ND +GH GD+VL Sbjct: 380 AYMDSLTGVFNRRAFDEFGRELIERFLTLSKPISVLMIDVDDFKRVNDSHGHQVGDQVLA 439 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI-SGLPRFT 371 L R + R+ D+VFR+GGEEF+ LLP T L+ AL + +R V S G R T Sbjct: 440 ELGRLIRETLRETDIVFRYGGEEFLALLPGTSLEGALRAGDKVRRRVEAHSFPPGDQRIT 499 Query: 372 VSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNRV 407 VS+GVA EG+E +++ R D ALY AK G+NRV Sbjct: 500 VSVGVAQGTEGDERAEDVVSRADRALYIAKKTGKNRV 536 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 97/167 (58%), Gaps = 3/167 (1%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 E++ A D +TGL RR+ + + SL L+D D FK IND YGH Sbjct: 198 EKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLDIDHFKRINDSYGHQA 257 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GD VL +A+T++S R D + R+GGEEF+L+LP+TPLD A AE +R +V + Sbjct: 258 GDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQTPLDGAFITAERLRRAVMDIPFPE 317 Query: 367 LP---RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + R T+S+G A E E+++ L RVD ALY AK GRNRV++A Sbjct: 318 VAPEFRVTISLGAAELEEGEAMETLISRVDKALYAAKGAGRNRVVSA 364 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 106/181 (58%), Gaps = 14/181 (7%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ-HLAIAQD----YSLLLIDTD 293 + E KR ++LEH A D +TG NRR+F QMQ +A A+ +SLL +D D Sbjct: 453 LQELKRTNQKLEHLATTDPLTGASNRRKFIE-----QMQAEIARAKRDGTAFSLLALDLD 507 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK IND YGH GD VL R + R D + R GGEEF++LLPR DTA +AE Sbjct: 508 NFKTINDNYGHQVGDVVLRNFVRQCLAAIRPYDHIARVGGEEFMVLLPRMLADTASGIAE 567 Query: 354 TIRVSVAKVS--ISGL-PRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +R ++A S I G TVSIGV+ + +++DE+ D LYRAKN+GRNRV+A Sbjct: 568 RVRTTIANASFGIDGTHTPVTVSIGVSQYGRDGDTVDEILSAADKLLYRAKNEGRNRVVA 627 Query: 410 A 410 + Sbjct: 628 S 628 >UniRef50_C1SNT9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNT9_9BACT Length = 626 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 4/177 (2%) Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 I DIT++KR+EE + D +T L NR + + + +H D+ +LID D Sbjct: 453 SISRDITDKKRIEE----LSVTDRLTSLYNRHKLDDVLQSEYSRHQRHNTDFCAVLIDID 508 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK++ND +GH GD+VL LA L++ R+ D + RWGGEEF+++ + L+ LAE Sbjct: 509 HFKNVNDTHGHQTGDKVLVKLAELLKANTRESDYIGRWGGEEFLIIAVESNLEGTAFLAE 568 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R V + + + T+S+G A ++ E+I R DDALY AK GRN+++ A Sbjct: 569 KLRRMVEETDFPIVGKITISLGAAQYKTGETIAHFINRADDALYTAKQTGRNKLVNA 625 >UniRef50_B6BIP1 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIP1_9PROT Length = 443 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 94/160 (58%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 + E+ A DA+TGL R +F+ + + SL+L+D D FK +ND+YGH+ G Sbjct: 279 EYENIASTDALTGLYTRHKFFQLYLSSYTSMVQRHNYMSLILVDIDYFKKVNDVYGHNAG 338 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D+ L +A TL R D+V RWGGEEF+++LP ++ A+ +A+ +RVS+ ++SI + Sbjct: 339 DKTLVQVAHTLLKILRNVDVVCRWGGEEFLIMLPTADMEHAIFIAQKLRVSIEELSIDVV 398 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 T S GV+ E + + R D ALY AK+ GRN V Sbjct: 399 GNVTASFGVSQVREGEEMQDAIDRADKALYLAKDSGRNCV 438 >UniRef50_A0NWC5 Sensory box/response regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWC5_9RHOB Length = 333 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 5/177 (2%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE+KRLEEQL+ AA DA+T NRR+F+ + + + + + S+L++D D FK Sbjct: 158 DITERKRLEEQLKRAAERDALTDAYNRRRFFELADSAEDRAKKTSASLSILVLDVDHFKQ 217 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND +GH+ GD L + L++ + + R GGEEF LL LD A ++AE IR Sbjct: 218 INDRFGHACGDAALNHIVGLLKNVLQAPHIFARAGGEEFYCLLEECGLDDAFTIAERIRG 277 Query: 358 SVAKVS-ISG---LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +V + G +P VSIGVA E + + R DDALY AK GRNRV A Sbjct: 278 AVETTPHMHGEQVIP-MRVSIGVASVADGEKVSQTIARADDALYCAKQAGRNRVCMA 333 >UniRef50_A6W233 Diguanylate cyclase n=2 Tax=Gammaproteobacteria RepID=A6W233_MARMS Length = 426 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 8/169 (4%) Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY--SLLLIDTDRFKHINDLY 302 L E+L++ A D++T +LNR F+ + Q+ L+ Q S +L+D D FK IND Y Sbjct: 258 LNEKLKYLATRDSLTDVLNRGSFFETAQ--QLLELSQRQKSKASFILMDLDFFKRINDTY 315 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR--VSVA 360 GH GD+VL +TL+ RK DL+ R GGEEF + LP T LD A LA+ IR +S A Sbjct: 316 GHFIGDKVLIHFTQTLQGFLRKSDLLGRVGGEEFAIFLPDTGLDAACQLADKIRQTISDA 375 Query: 361 KVSISG-LPRFTVSIGV-AHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + G +TVS+GV + ++ IDELFKRVD LY AK+ GR+RV Sbjct: 376 ALEVEGKTVTYTVSLGVESSGPEDQLIDELFKRVDLKLYGAKDKGRDRV 424 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 137/278 (49%), Gaps = 34/278 (12%) Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS-----HLPGGHKPLN 204 G+IVDAN AA F + + ++ + +M S LP G K ++ Sbjct: 258 SGRIVDANPAACQFLQSDVAGLIGMRARDVFAPWYATLVVMEPGSGSVEIRLPYGFKEMS 317 Query: 205 FVH----KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 ++ ++ D R ++G L ++ D++E+K E +L A D +TG Sbjct: 318 WLEIERSEIRDARGR----------LWGQ---LVLMRDVSERKEAESRLLQMAATDELTG 364 Query: 261 LLNRRQFYHITEPGQMQHLAIAQDYS----LLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 L NRR+F+ + G+ A+ YS +LL+D D FK IND YGH GD L + Sbjct: 365 LYNRRRFFELAR-GEFNR---AKRYSSPMTILLLDIDYFKRINDEYGHDAGDTALRCIVS 420 Query: 317 TLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR---FTVS 373 + S R D++ R GGEEFV LLP T A +AE IR + +I+ TVS Sbjct: 421 MIASQLRSLDVLARLGGEEFVALLPETHQFDAERIAERIRSEIESTAINLFETTLFVTVS 480 Query: 374 IGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRVLAA 410 IGVA + + + EL R D+A+YRAK DGRN+V A Sbjct: 481 IGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQVCLA 518 >UniRef50_Q488E6 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488E6_COLP3 Length = 333 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/161 (40%), Positives = 102/161 (63%), Gaps = 11/161 (6%) Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D++TGLLNRR ++Q+L+ A +S L ID D FK +ND +GH GD+V+ +A Sbjct: 178 DSLTGLLNRRGC-----DEKLQNLSHADTHSSLAIDIDHFKKVNDTFGHFIGDKVIQRIA 232 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI------SGLPR 369 +T++S + DL R+GGEEFV+++ TPL A ++AE IR+ ++K+ + + LP Sbjct: 233 KTIQSHIGEQDLAVRFGGEEFVVVMTNTPLAEAKNIAEKIRIGISKMRLKQRDTNTFLPP 292 Query: 370 FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +VSIG+A ++ LF++ D ALY+AKN GRN + A Sbjct: 293 ISVSIGIAQNDNISEWTTLFEQADTALYQAKNSGRNCCICA 333 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 3/181 (1%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 + L + HD+ + RL+ +L + D +TG+ NRR+F+ + + + ++L+I Sbjct: 308 IALVLRHDLMRRSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMI 367 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLE-SCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D DRFK +ND GH+ GD VL A+A+ + S R DL R+GGEEF +LP T + A Sbjct: 368 DIDRFKLLNDRLGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAF 427 Query: 350 SLAETIRVSVAKVSISGLPRFTVSIGVAH--HEGNESIDELFKRVDDALYRAKNDGRNRV 407 AE IR V + I G TVSIG+A NE+ + + D ALYRAK GRNRV Sbjct: 428 QTAERIRTQVERDVIRGDHPVTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRNRV 487 Query: 408 L 408 + Sbjct: 488 M 488 >UniRef50_A1TGQ8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1TGQ8_MYCVP Length = 448 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 98/178 (55%) Query: 233 LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 + I +IT + L+ A+ DA+TGLLNRR E + S+ + D Sbjct: 270 VAIAPNITHMVEQQMVLQEMANMDALTGLLNRRSGQIALEIELQKAAESGAPISVAMGDI 329 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FK IND GH+ GD+VL ++A +L R+ D+ RWGGEEF++ LP TPLD A+ L Sbjct: 330 DHFKRINDRLGHAVGDDVLRSVAGSLRDGLRRNDVAIRWGGEEFLVFLPNTPLDDAVPLT 389 Query: 353 ETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E IR VA T+S GV ES+ +R+D A+Y AK+ GR+RV+++ Sbjct: 390 ERIRNHVATTPQIASDSVTMSFGVGQWRPGESVAAFVERIDAAMYEAKSGGRDRVVSS 447 >UniRef50_Q7UR09 Probable response regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UR09_RHOBA Length = 824 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 19/273 (6%) Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLG--------RRVMPIMHEISHLPGGHK 201 +GQ+ N E M +H W+ + LG V P+ + + Sbjct: 401 EGQVTFWNETLARMTSVASEAMVGRH-WDADTLGMVDESGNESAVCPVADSLRLQTTVTR 459 Query: 202 PLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQLE---HAAHHDA 257 + VH A +R V P+ + YG L +V D++++ +L+ Q++ A D Sbjct: 460 TMKIVHGSA---SRDVLLQVSPVSDPYGGG-ALVLVRDMSDRNKLQSQIQTLHKKATSDP 515 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TG+ NR +F +SL++ D D FK +ND++GH GDE L AR Sbjct: 516 LTGIANRAEFDSRLVRATADSKKNNSTFSLIICDIDHFKQVNDVHGHPAGDEALVQFARV 575 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL--PRFTVSIG 375 LES AR DLV R+GGEEFV L + TA AE IR ++ + GL TVS G Sbjct: 576 LESHARDEDLVARYGGEEFVFLAINSDNATAARRAEQIRKAIEVTPLDGLNGESVTVSFG 635 Query: 376 VAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 V ++ ++ + + R D AL +AK +GRNRV+ Sbjct: 636 VTEYQTGDAAETILARSDRALLQAKENGRNRVV 668 >UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8 Tax=Campylobacterales RepID=A7GXF8_CAMC5 Length = 422 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD----YSL 287 ++C V++ E Q+ + A+ D +T + NRR FY Q+LA A++ Y++ Sbjct: 240 LICRVNNTIEAMENINQIANFANRDFLTSVYNRRYFYD----DMTQYLAKAEETAEPYAI 295 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 +ID D FK+IND YGH GD+VL LA+ L + D+V R+GGEEF ++L + Sbjct: 296 AMIDIDHFKNINDTYGHDSGDKVLQFLAKKLVDDTKGNDIVARFGGEEFCVVLKNISQEE 355 Query: 348 ALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 A+ +R +A IS + FTVSIGV + + +DEL + D+ALY AK GR Sbjct: 356 AVKFFVNLRAKIANSKISLKKNVINFTVSIGVVFNRSDYRLDELLELADEALYIAKESGR 415 Query: 405 NRVLAA 410 NRV A Sbjct: 416 NRVEVA 421 >UniRef50_Q7MSI2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSI2_WOLSU Length = 431 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 141/283 (49%), Gaps = 35/283 (12%) Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG-------HKP 202 D I AN A GY+ E + K + R ++ ++S L GG K Sbjct: 160 DKTITYANEAFCQISGYSKEELTGK-------IYRHMVSPRQDLSRLDGGLWVNVLRGKS 212 Query: 203 LNFVHKLAD--GSTRHVQTYAGPIEIYGDKL--MLCIVHDITE----QKRLEEQ---LEH 251 + +L + G +Q P+ K+ ++ + DITE ++ LE+Q LEH Sbjct: 213 WKGMIELLNKKGEPYFIQASMFPLFDADGKITELIALQFDITEHIKTKQILEKQNQKLEH 272 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD----YSLLLIDTDRFKHINDLYGHSKG 307 AH D +TG+ NR +F I Q + A+ +SL+L+D DRFK IND +GH G Sbjct: 273 IAHTDTLTGVWNRYKFNKILR----QEIKCAKSSNHPFSLMLLDVDRFKTINDTHGHQFG 328 Query: 308 DEVLCALARTLESCAR-KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 D VL A+ TL+ + K ++ RWGGEEF++L L AL LAE +R ++ + Sbjct: 329 DRVLKAITSTLKRQLKHKEAMIARWGGEEFIVLAQGYRLAQALELAERLRAAIEGMEFEN 388 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +P T S GV + +D L +R D ALY AK GRNR+++ Sbjct: 389 IP-ITSSFGVTEFSPEDELDTLVRRADLALYTAKESGRNRIIS 430 >UniRef50_Q1JYF1 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYF1_DESAC Length = 319 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 5/173 (2%) Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 KR L + + D++T L NRR + + + +SLL++D D FK+IND Y Sbjct: 132 KRSNRLLLNLSSTDSLTQLYNRRVLMRTLRKEFQRQVRTEESFSLLMVDVDHFKNINDRY 191 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GD VL LAR L S R D+ R+GGEEF L+LP T ++ A +AE +R++ ++ Sbjct: 192 GHLNGDTVLINLARMLRSYLRPYDVPTRFGGEEFALVLPNTNMECAREVAERLRLAAKEL 251 Query: 363 SISGLPR---FTVSIGVAH--HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 SG R T+SIGVA +G ES D+L K DDALY AK+ GR++V+ A Sbjct: 252 RFSGEIRDLEITISIGVATCPADGVESEDDLLKLTDDALYAAKSAGRDQVVCA 304 >UniRef50_A1T013 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T013_PSYIN Length = 406 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 21/208 (10%) Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DG R Y I+ G+ + ++ D+T++ E++L H A HD++T L NR Y Sbjct: 207 DGIKRFFNIYDHAIQWQGEPAVEVVMVDVTDKVMAEKRLAHKAFHDSLTDLYNRDAIYKW 266 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTL-ESCARKGDLVF 329 +H S +LID D FK +ND YGHSKGD VL A E A KG ++ Sbjct: 267 IH----EHCGKVNSMSCMLIDLDNFKRVNDTYGHSKGDNVLKIFANLFKEKIAEKG-VIG 321 Query: 330 RWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRF--------TVSIGVAHHEG 381 RWGGEEF++ +P TAL+LAE +R++ A+ P F TVSIGV++ + Sbjct: 322 RWGGEEFIVFVPDRDKKTALALAEKVRIACAQT-----PLFLQGKEIITTVSIGVSYTDS 376 Query: 382 NESI--DELFKRVDDALYRAKNDGRNRV 407 I ++ K+ D +Y +K+ G+NRV Sbjct: 377 FAQIKPKDIIKQADHNMYLSKSLGKNRV 404 >UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L189_9DELT Length = 579 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 86/152 (56%) Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +TGL NRR+ + +S ++ID D FK IND +GH KGDEVL +A Sbjct: 414 DRLTGLCNRRKIDQAVRAEWRRAKRYGTPFSAVMIDLDNFKDINDRFGHGKGDEVLVRVA 473 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIG 375 L + R+ D V RWGGEEF+L+ P+T L A+SLAE IR +A + T S G Sbjct: 474 DILIAMTRETDTVGRWGGEEFLLICPQTGLRAAMSLAENIRQEIAATEFPSIGGLTASFG 533 Query: 376 VAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +A G+ ++ R D ALY+AK GRNR+ Sbjct: 534 LAAFSGDADPRQIVDRADAALYQAKAKGRNRI 565 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 8/172 (4%) Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA----IAQDYSLLLIDTDRF 295 +E + L A D +TGL NR +F G Q LA Q SL++ D D F Sbjct: 552 SELQERAAALARQATTDPLTGLHNRLRFNE----GLAQELARVRRTGQPLSLVMFDVDHF 607 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND YGH GD+VL L++T + R+ DL+ RWGGEEF +LL L A+ +AE + Sbjct: 608 KEVNDRYGHPTGDQVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENL 667 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 R VA+ + T S GVA +ES D L +R D ALYRAK++GRNRV Sbjct: 668 RRLVARTPFDQIGSVTASFGVAECRPDESADSLLERADAALYRAKSNGRNRV 719 >UniRef50_D0IUU3 Diguanylate cyclase n=4 Tax=Comamonas testosteroni RepID=D0IUU3_COMTE Length = 519 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/164 (43%), Positives = 95/164 (57%), Gaps = 5/164 (3%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +L + D +TGL NRR Q Q L +S++ ID D FKHIND +GH G Sbjct: 351 KLREDVNTDPLTGLGNRRHLEAAISAFQTQALP----FSVIAIDIDHFKHINDGFGHDTG 406 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 DEVL LART+ +R DL R GGEEF+LLLP T L+ A AE +R V K+ I + Sbjct: 407 DEVLRQLARTMREVSRVDDLPCRVGGEEFLLLLPGTGLEAAAHAAERLRQLVEKMEIPPV 466 Query: 368 PRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S+GVAH + + I +F++ D LY AK GRNRV+ + Sbjct: 467 GHITISLGVAHWPDSDPDIKAVFQQADAMLYAAKRGGRNRVMVS 510 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 102/184 (55%), Gaps = 5/184 (2%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 M+ DITE+K+LEE+L+ A D +TG+ NRR F E + S ++D Sbjct: 406 MIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLD 465 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK +ND YGH GD VL +A R+ D++ R GGEEF +LLP T A + Sbjct: 466 IDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEV 525 Query: 352 AETIRVSVAKVSI---SGLP-RFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNR 406 AE +R +A + +G P +FTVSIGVA ++ID L D+ALY+AK GRNR Sbjct: 526 AERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNR 585 Query: 407 VLAA 410 V A Sbjct: 586 VYIA 589 >UniRef50_A0Y2V2 GGDEF family protein n=3 Tax=Alteromonadales RepID=A0Y2V2_9GAMM Length = 524 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 11/167 (6%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD-YSLLLIDTDRFKHINDLYGHSK 306 QL+H A D +T NRR G + L + Q +++L ID D FK +ND +GH K Sbjct: 365 QLKHDAQTDPLTNTHNRRSL-----NGLLSQLMLKQTPFAILEIDIDFFKRVNDTFGHDK 419 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDE L LA ++ +RKGD+V R GGEEF+L+LP +AL +AE +R +V + Sbjct: 420 GDEALKVLADIIKKISRKGDIVSRIGGEEFLLVLPHEDSQSALKIAERLRTTVETTQMET 479 Query: 367 LPRFTVSIGVA---HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + TVSIG+A H N ID+++K D ALY AK GRNR + A Sbjct: 480 IGFITVSIGIATWPTHSNN--IDQVYKCADKALYYAKEHGRNRCVVA 524 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 + +LE A D +T LLNRR F + QH Q SLLL+D D FK IND YGH+ Sbjct: 310 QAELEGIAWRDPLTSLLNRRAFIDRYAAIRNQHQRNGQPLSLLLVDIDHFKEINDRYGHN 369 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA---KV 362 GD VL ++ L R DLV RWGG+EF+LLL T D A +AE IR ++ + Sbjct: 370 AGDLVLKGISEILTEAVRPSDLVTRWGGDEFLLLLSGTDSDNARDIAERIRTRISLEPDL 429 Query: 363 SISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 + R TVSIGVA + +D + D LYRAK GR+R Sbjct: 430 AAISEQRLTVSIGVAEQRDDFDLDRHVQEADSGLYRAKKAGRDR 473 >UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V79_RHOFD Length = 380 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/179 (41%), Positives = 100/179 (55%), Gaps = 5/179 (2%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 L+ I + RL +LEH A+HD++T L RR + +LL++ Sbjct: 202 LLFSISAVLMATDRLRIELEHLANHDSLTNALTRRHMDDACRSELERCRRHGHSMALLIM 261 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK IND+YGH GD+ L + + R D + R+GGEEFV LLP T LD A++ Sbjct: 262 DLDHFKEINDIYGHQAGDQALINFVARVNALLRGPDQLGRFGGEEFVALLPETSLDEAIA 321 Query: 351 LAETIRVSVAKVSISG-LPRFTVSIGV-AHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +AE IR +++G P TVSIGV + + N+S+D L R D ALYRAK GRNRV Sbjct: 322 VAERIR---GACTLAGQAPACTVSIGVTTNRKDNDSVDTLLARADAALYRAKAAGRNRV 377 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 13/199 (6%) Query: 221 AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 G ++ G ++ I+ DI+++K+LE +LE A D++TG+LNRR+ + ++ L Sbjct: 202 CGVLDDDGTMVLEGIILDISDRKQLENELEALATRDSLTGVLNRRECSRVL----IEELE 257 Query: 281 IAQDY----SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 A+ Y +LL ID D FK IND +GH+ GD VLC+++ LE R D + R+GGEEF Sbjct: 258 RARRYNRPLALLWIDFDHFKEINDTWGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEF 317 Query: 337 VLLLPRTPLDTALSLAETIRVSVAKVSI---SGLP-RFTVSIGVA-HHEGNESIDELFKR 391 VL+LP + A AE +R V + SG R T+SIGVA + +++D L Sbjct: 318 VLILPEMDVAEAEETAERLRQRVCNQPVALESGHNIRLTISIGVAVFPDHGDTLDALCAA 377 Query: 392 VDDALYRAKNDGRNRVLAA 410 D A+YRAK GRN + A Sbjct: 378 ADKAMYRAKKQGRNCIAMA 396 >UniRef50_B8IFL7 Diguanylate cyclase n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IFL7_METNO Length = 628 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 12/176 (6%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE--PGQMQHLAIAQDYSLLLIDTDRFK 296 I E+ + +L A D +TGLLNRR + + PG L+LID D FK Sbjct: 428 IEERATMTSELRVQAETDGLTGLLNRRMLDRLAQSPPGSAD-----DKVCLILIDIDHFK 482 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 IND YGH+ GD VL +A L+S R D++ R+GGEEF +L+P L A+++A +R Sbjct: 483 AINDTYGHATGDRVLIQMAELLQSVLRASDVIARFGGEEFAVLVPGADLSGAITVARKVR 542 Query: 357 VSVAKVSIS---GLP-RFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNRV 407 +++ + + G P R T S GVA G E+ L + D+ALYRAK+DGRNRV Sbjct: 543 IALQRARFTTPDGTPVRVTASFGVARGRRGQEAWPCLVELADEALYRAKSDGRNRV 598 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 85/214 (39%), Positives = 117/214 (54%), Gaps = 18/214 (8%) Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH-DITEQKRLEEQLEHAAHHDAMTGL 261 +N V K+A+ + H PI + G VH +I +K LE +L AH D +T L Sbjct: 346 MNSVFKIAEFNALH-----QPIRMIG-------VHANIHSRKLLELELNQKAHIDYLTEL 393 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NR F E + +D ++ ++D D FK IND +GH GD VL LA Sbjct: 394 NNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQT 453 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLP-RFTVSIGVA 377 R+ D++ R GGEEF +LLP T AL +AE +R++VA + GLP ++TVSIGV+ Sbjct: 454 LREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVS 513 Query: 378 H-HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +++ID L R D ALY+AK GRNRV AA Sbjct: 514 SVASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WR5_DESDG Length = 361 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 98/189 (51%), Gaps = 5/189 (2%) Query: 225 EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 E+ +K L I H+ + K+ +E + D +TG NRR+ + Sbjct: 151 ELSRNKRELAIRHE--QLKKAFSDIEELSRTDPLTGACNRRKVIEFLSAEIDRSKRYGTP 208 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 S+L +D DRFK IND YGH+ GD+ L A R RK DL R GGEEFV +LP Sbjct: 209 LSILSLDIDRFKAINDTYGHAAGDDALIAFCRVCRQQLRKTDLFGRTGGEEFVAVLPHAA 268 Query: 345 LDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKN 401 A AE IR V ++ I+ RFTVSIG+A HE E+ D L +R D ALYRAK Sbjct: 269 CRDAQISAERIRRHVEQIHITYNNACVRFTVSIGIAVHEAGENTDTLLRRADAALYRAKT 328 Query: 402 DGRNRVLAA 410 GRN V A Sbjct: 329 AGRNTVSVA 337 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 91/160 (56%) Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +LE A D +TG NRR+ + Q SLL++D D FK IND +GH G Sbjct: 160 ELEQVAGTDKLTGAWNRRRIEECVRSEMDRLNRYDQPLSLLVVDIDHFKAINDQHGHGAG 219 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 D+VL A+ L+S R D + RWGGEEFV++ P T TA LAE +R +A + Sbjct: 220 DQVLQAVTALLQSRLRGTDALARWGGEEFVVVCPNTGRSTAALLAERLRGQIASADFPLI 279 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + TVSIG A ++ +E F+R D+ALYRAK GRN+V Sbjct: 280 GQLTVSIGAAECSPGDTWEEWFQRADEALYRAKTGGRNQV 319 >UniRef50_C9PKD3 Diguanylate cyclase n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PKD3_VIBFU Length = 457 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 14/233 (6%) Query: 186 VMPIMHEISHLPGGHKPLNFV----HKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDI 239 V I+ I + G K LN A V+T E+ D +M + +I Sbjct: 223 VRAILQRIQRIKGEIKTLNTSLDHGEAFAVEVAEQVKTNDELAELEHDIKVVMSRLAQEI 282 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ----DYSLLLIDTDRF 295 T ++++E+QL A D +TG NR ++ E +MQ L +AQ + L+++D D F Sbjct: 283 TCREQIEKQLLTLATQDKLTGAYNRHKW---DEQIEMQ-LGLAQRGGYSFGLIVLDVDYF 338 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND +GH GD++L L + L+ R D +FR GGEEF +LLP +DT +LAET+ Sbjct: 339 KQVNDQFGHQVGDQLLQQLVKQLQQRIRATDTLFRLGGEEFAILLPMQDIDTTYTLAETL 398 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 R + + + GLP FT+S+GV ++ ++ +F+R D ALYRAK GRN V+ Sbjct: 399 RAQMEALQLDGLPAFTISLGVTCYQPMDNETAIFRRADMALYRAKAQGRNCVV 451 >UniRef50_A5P717 Response regulator n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P717_9SPHN Length = 209 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 20/187 (10%) Query: 239 ITEQKRLEEQLEHAAHH-------DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + E ++L E L A H D +TGL NRR+ + + GQ L +L+ID Sbjct: 27 LVENRQLSEDLSDALAHAEYLGVRDPLTGLYNRRKLFEERDDGQEGQL-----RQVLMID 81 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARK----GDLVFRWGGEEFVLLLPRTPLDT 347 DRFK IND +GH+ GD VL A A + +C + DL FR GGEEFV +L + Sbjct: 82 LDRFKSINDRFGHAAGDRVLVATASAIRNCLERMDGTSDLAFRLGGEEFVAILDSEDFEK 141 Query: 348 ALSLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDG 403 A S+AE +R +A++++ +G + SIG+A E +D++ R D A Y+AKN+G Sbjct: 142 ARSIAEELRRDIARIALDESHTGSFETSASIGLASWHPGEKLDDVLHRADAACYKAKNEG 201 Query: 404 RNRVLAA 410 RNRV +A Sbjct: 202 RNRVRSA 208 >UniRef50_B7X0J9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0J9_COMTE Length = 442 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/188 (44%), Positives = 101/188 (53%), Gaps = 15/188 (7%) Query: 238 DITEQKRLEEQL-------EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 DIT +R +E+L E A DA+TGL+NRR+F E + SLLL+ Sbjct: 253 DITASRRQQEELRQLTLHLESLAVKDALTGLVNRRRFDEALESEWRRAHRSETALSLLLL 312 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D D FK +ND +GH GDEVL A L C R G LV R+GGEEF +LLP T L A Sbjct: 313 DVDHFKQLNDSFGHPFGDEVLKCFAGLLAHCVQRAGSLVSRYGGEEFAILLPGTGLSGAA 372 Query: 350 SLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEG---NESIDELFKRVDDALYRAKND 402 LAE IR V +S+ +GL + TVS+GVA G + S L D ALY AK Sbjct: 373 RLAEFIRQQVEALSLGNQQTGLVQITVSVGVACASGPALDSSCSSLIDMADRALYEAKRK 432 Query: 403 GRNRVLAA 410 GRN V A Sbjct: 433 GRNSVCLA 440 >UniRef50_Q3SF49 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF49_THIDA Length = 321 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 110/311 (35%), Positives = 148/311 (47%), Gaps = 42/311 (13%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR----- 184 Y R F ML++ RDG + N A +GY+ + + T E+ + R Sbjct: 3 IYQRIFEYAPDAMLVL--GRDGLLRLVNAHAETLFGYDRSELLGQ-TVELLVPARFTAQH 59 Query: 185 ---RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 R + S G + L + K DGS V P+ + G+ L LC+V DITE Sbjct: 60 AAHRARFMEEAQSRQMGRQQDLYALRK--DGSEFPVDIMLSPMIMGGEHLTLCVVRDITE 117 Query: 242 QKRLEEQLEHA--------------AHHDAMTGLLNRRQFYHITEPGQMQHLAIA--QDY 285 +K ++ LEH A+HD +TGL N R FY GQ+ A + Sbjct: 118 RKAAQDALEHQTNELLRLHAELELLANHDGLTGLYNWRAFYE--HAGQLLTTAHRRHEKA 175 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL 345 SLL++D D FK IND +GH++GD VL A A L++ AR+ D+V R GGEEFV + L Sbjct: 176 SLLILDLDHFKQINDRFGHAEGDRVLQAAAAALKASARQNDIVARHGGEEFV--IAGFGL 233 Query: 346 DTALSLAETIRVSVAKVSISGLP-RFTVSIGVA--------HHEGNESIDELFKRVDDAL 396 A SL R+ A SI L R T S+GVA HE + +L R D AL Sbjct: 234 SEAESLVAAERLRAAVASIENLACRVTTSVGVATFVPDPSSRHEPPTLLADLLDRADQAL 293 Query: 397 YRAKNDGRNRV 407 Y AK GRNR+ Sbjct: 294 YHAKRSGRNRI 304 >UniRef50_Q6AJQ0 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJQ0_DESPS Length = 390 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 109/218 (50%), Gaps = 23/218 (10%) Query: 215 RHVQTYAGPI-EIYGDKLMLC-IVHDITEQKRLEEQLE---------------------H 251 RH A P+ ++ G+ + +C HDIT K++E++L+ Sbjct: 164 RHYLLLAFPLKDVEGNTVGVCGFSHDITRFKQVEKELQLMNKKLRLSQEELEKKNEELCR 223 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 + D++TGLLNRR + E + SLL+ D D FK ND YGH GD VL Sbjct: 224 LSLTDSLTGLLNRRAIEPLAERAMARSRRSGYSVSLLIFDIDYFKQFNDQYGHVAGDRVL 283 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFT 371 A A+ + + R D + RWGGEEFV+L T L A+ LA IR VA +S + T Sbjct: 284 AAAAKEVGNSIRITDSIVRWGGEEFVVLATDTDLVQAVQLANKIRQVVAAISFEDMGGIT 343 Query: 372 VSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 VS+G+A + G + K D ALY+AK GRN +A Sbjct: 344 VSVGLAQYNGKGDFRQWLKCADRALYQAKGRGRNCTVA 381 >UniRef50_A1WWL1 Diguanylate cyclase n=2 Tax=Halorhodospira halophila SL1 RepID=A1WWL1_HALHL Length = 559 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 222 GPIEIYGDKLMLC--IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 GP+ + +L I + +R L+ A HD +TGLLNR QH Sbjct: 366 GPVRWIHELRLLAWQINRGLARSRREIHALDQQAQHDRLTGLLNRSGLDQQIATQVAQHQ 425 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 + ++LLID D FK +ND +GH+ GD++L LA L + R+ D+V RWGGEEFV+L Sbjct: 426 ETGKPLAMLLIDLDHFKRVNDEHGHAVGDKILRHLADQLRAGVREADIVGRWGGEEFVIL 485 Query: 340 LPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRA 399 LP T LD A A+ +R ++A + T S GV+ +S +LF+R D ALY A Sbjct: 486 LPATGLDGAQQSADKLRRALADHPVLRQHGLTASFGVSVLASEDSDRDLFERADCALYAA 545 Query: 400 KNDGRNRV 407 K+ GRNRV Sbjct: 546 KHQGRNRV 553 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 8/169 (4%) Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDTDRFKHI 298 ++ +E+L A DA+TG+ NR++F E +A A+ Y SL+ +D D FK + Sbjct: 160 RQQQEELVRLASTDALTGVWNRQKFKTEAE----HEVARAERYNLPLSLIFLDLDYFKEV 215 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH+ GD +L + + L++C R+ D + RWGGEEF++L+P D A LAE +R + Sbjct: 216 NDRYGHATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHADSDRAALLAEKLRQA 275 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +A + ++S+GV E +++++L ++ D ALYRAK GRNRV Sbjct: 276 IADTPAAHGQPMSISLGVVSREPGDALEDLVRKADAALYRAKARGRNRV 324 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 5/176 (2%) Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 IV EQ LE L A D +TG+ NRR F + + +A S++LID D Sbjct: 205 IVMLANEQVTLE--LRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDH 262 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK IND +GH GDE L C R GD++ R GGEEF +LLP T + A ++AE Sbjct: 263 FKKINDTWGHKSGDEALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAER 322 Query: 355 IRVSVAKVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +R VA + G TVSIGV H+ +E+ + R D+A+Y AK+ GRN+V Sbjct: 323 LRCEVAARPVKNEHGSITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQV 378 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 113/206 (54%), Gaps = 9/206 (4%) Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 N V L G+ +V I+ Y ++L V +K + +E A D +TGL N Sbjct: 90 NVVDGLDLGAVDYV------IKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYN 143 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR F+ + + D S +++D D FK +ND YGH GD+VL LA+ + R Sbjct: 144 RRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFR 203 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHE 380 K DL R+GGEEFV+ LP T + AL +AE R V ++S + G T+S+GV+ Sbjct: 204 KVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKGPLHVTISLGVSSAN 263 Query: 381 GNESIDELFKRVDDALYRAKNDGRNR 406 N +++++ KR DDALY+AK +GRNR Sbjct: 264 ENTTLEDMLKRADDALYQAKQNGRNR 289 >UniRef50_A8FRI3 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FRI3_SHESH Length = 578 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 224 IEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 I+I L L + TE+++L EH A D +TGL NRR FY IT P + Sbjct: 380 IDIVLLALALAVKFRATEREKLIA--EHQAKIDPLTGLKNRRAFYEIT-PSFWKQKRTRV 436 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT 343 S+++ID D FK IND YGH+ GDEVL A L R+ D+V RWGGEEF+LLLP+T Sbjct: 437 GVSMIIIDIDYFKAINDTYGHTVGDEVLVQFATLLNKNLRQQDIVARWGGEEFILLLPKT 496 Query: 344 PLDTALSLAETIRVSVAK---VSISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRA 399 L A ++++ + S++K ++ + T SIG+AH + ++++L D LYRA Sbjct: 497 RLKEASTISKHLCESISKHAFIADRNELQVTASIGLAHGSPAQFTLEQLISLADQQLYRA 556 Query: 400 KNDGRNRV 407 K G+N++ Sbjct: 557 KQRGKNQI 564 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 22/227 (9%) Query: 200 HKPLNFVHKLA--DGSTRHVQTYAGPI---EIYGDKLMLCIVHDITEQKRLEEQLEHA-- 252 H F ++ +G RHV + G + E G + I+ DI+ Q EE +E A Sbjct: 373 HTSFEFKARIVRPNGEVRHVFS-KGEMDQGESNGAYGLFGIIQDISAQVAHEESMEQARR 431 Query: 253 ------------AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 A D +TG+ NRR+ + + + S+ + D D FK IND Sbjct: 432 SAEDAAQRALIMAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRIND 491 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH GDEV+ +A+ + R GDLV R+GGEEFV++LP +TAL + E IR ++ Sbjct: 492 SYGHHTGDEVIKRVAQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETI- 550 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + SG P T+SIGVA E+ D L +R D ALY AK GRNR+ Sbjct: 551 EAANSG-PPVTISIGVAELAQGETADALLRRADRALYSAKRAGRNRL 596 >UniRef50_B9L7P4 Diguanylate cyclase/phosphodiesterase domain 1 n=1 Tax=Nautilia profundicola AmH RepID=B9L7P4_NAUPA Length = 614 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 6/158 (3%) Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 + + DA+T + NR I + D SL+ D D FK+IND YGH KGD Sbjct: 459 KEKSEFDALTQIYNRGTIEKILNKKIKE-----TDGSLIFFDIDHFKNINDNYGHEKGDL 513 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR 369 VL +LAR ++ R D RWGGEEFV++LP+ P + A +AE +R + + GL Sbjct: 514 VLASLARIIQKNIRSSDYFGRWGGEEFVIILPQAPYEIAYKIAEKLRKIIEQTDFDGL-N 572 Query: 370 FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 T+S+GV+ + ++ + + K+VD+ALY AKN GRN+V Sbjct: 573 ITISLGVSEFKKGDNPEVVLKKVDEALYEAKNSGRNQV 610 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 12/164 (7%) Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY----SLLLIDTDRFKHINDLYGHSKGD 308 A D +TG+ NR FY + AIA Y ++ ++D D FK IND YGH GD Sbjct: 163 ARMDWLTGVYNRSHFYELAR----HEFAIATRYERPLTMCMLDVDHFKQINDRYGHLVGD 218 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---S 365 +VL A+A+T+ R D + R+GGEEF+LLLP T L +AL+LAE +RV++A + + Sbjct: 219 QVLRAVAQTVAHQIRTADSIGRFGGEEFILLLPNTNLPSALTLAERLRVTIADLQVHTDR 278 Query: 366 GLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVL 408 G+ T+S+GVA + + +I+ L R D ALY AK GRN V+ Sbjct: 279 GIVTATISVGVAERQSTDTTIERLIDRADRALYAAKRQGRNCVV 322 >UniRef50_A8FSE2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=A8FSE2_SHESH Length = 340 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 101/170 (59%), Gaps = 3/170 (1%) Query: 241 EQKRLEEQLEHAA---HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 + + LEE+++ A + D +T + NRR F + ++ SL + D D FK+ Sbjct: 168 KNQELEEKIKEVALLSNIDPLTSIANRRSFEKELQKEVLRSRRYNHPLSLTIFDIDLFKN 227 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND YGH KGD++L L + + + R+ D RWGGEEFVL+ P L AL + E +R Sbjct: 228 VNDTYGHKKGDDILQKLCKLVSTNIRELDFFARWGGEEFVLIFPELTLKQALVVTEKLRT 287 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 ++++ I T S GV + +SI+++F+R+D++LY+AK++GRNR+ Sbjct: 288 TISQYEIEPDLYITCSFGVTECKDEDSIEDIFQRIDNSLYQAKSNGRNRI 337 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 233 LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 L +++ +R Q+ AH DA+T L NRR E + + ++LLL D Sbjct: 180 LALLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADL 239 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FK IND YGHS GD+VL +A L R+ D + RWGGEEF++L P T L A LA Sbjct: 240 DHFKQINDTYGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLA 299 Query: 353 ETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + + ++ + ISG+ + T+S+GVA + +SI L R D+A+YRAK GRN+++ Sbjct: 300 QRLLGAIRESPISGV-QVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIV 354 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 11/184 (5%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 L L + + + E + + E A DA+T L NRR F + P + SL+++ Sbjct: 385 LALGLSNWMRENRDALYEAEQVARLDALTHLNNRRAFMELALPYASTAGRHERPMSLVMM 444 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK IND YGH GD VL A+A L++ +R D+V RWGGEEF+LLLP T L A++ Sbjct: 445 DIDHFKSINDQYGHQTGDLVLTAVADLLKNFSRTSDIVARWGGEEFILLLPETGLKQAIN 504 Query: 351 LAETI-------RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDG 403 AE + R+ V + SIS T S G+A H N S D++ ++ D LY AK G Sbjct: 505 HAERLRQAIAEFRIPVGETSIS----LTASFGIAAHVANLSFDKMIEQADVQLYEAKRSG 560 Query: 404 RNRV 407 RN+V Sbjct: 561 RNKV 564 >UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2B6_9DELT Length = 427 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 8/186 (4%) Query: 233 LCIVHDI-----TEQKRLE---EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 LCI+ + +++RLE E L A D +TG NR +F + E + A+ Sbjct: 216 LCILRPMVRRICADRERLEGANEALTELAVTDQLTGAYNRLKFNQVMEHEIKRTGRYAEP 275 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 S+++ D DRFK +ND YGH+ GD++L L R +++ R D +FR+GGEEFV+ P T Sbjct: 276 LSVIMFDIDRFKVVNDTYGHAAGDDMLRELTRRVQAAIRAVDWLFRYGGEEFVVAAPHTG 335 Query: 345 LDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 A LAE +R VA ++S+GV E+++EL +RVD ALY AKN GR Sbjct: 336 RAQAAVLAEKLRALVAGAPFPHGIAGSISLGVTELAPGETVEELMQRVDAALYEAKNSGR 395 Query: 405 NRVLAA 410 NRV+ A Sbjct: 396 NRVVVA 401 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 101/167 (60%), Gaps = 12/167 (7%) Query: 251 HAAHHDAMTGLLNRRQF---YH--ITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 + A D +T L NRR+F +H + E + + + +SL+++D D FK IND YGH Sbjct: 187 NKAEFDYLTELFNRRKFEEYFHKLLKEFNEGE----GKPFSLIILDIDDFKQINDTYGHL 242 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI- 364 GDEVL L+ +++ + R GGEEF +LLP TPLD A ++AE +R +V +I Sbjct: 243 LGDEVLKNLSSLIKTFLHSAHIPARIGGEEFAILLPETPLDEAKTIAERLRKTVENRTIP 302 Query: 365 --SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 G FTVSIGVA + +++D L KR D+ALY AK +G+N V+A Sbjct: 303 IAEGDLNFTVSIGVAQVQKGDTMDSLLKRADEALYEAKRNGKNMVIA 349 >UniRef50_UPI0001AEC495 diguanylate cyclase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC495 Length = 627 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 14/224 (6%) Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 +++ HE+S L +LA+ + ++ AG + ++G L+ I + Q+R Sbjct: 410 QLLKQQHELSQL-----------ELANSNRMNLILTAGALTLFG--LLALISYLYAVQRR 456 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 L+ + E A D +TG+ NRR + + + D SL+LID D FK IND YGH Sbjct: 457 LKREQETLATVDTLTGVRNRRSLLGAVQLELNEAKSYKNDLSLVLIDLDNFKEINDNYGH 516 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD++L A + C RK D R+GGEEF+L LP+T A + +I S KV I Sbjct: 517 ECGDDLLKAFCEHVSKCIRKTDTFGRYGGEEFILCLPKTSAAEAKKVVNSILDSYRKVRI 576 Query: 365 S-GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 S + T S G+A ++ L K+ D+ALY AK GRNRV Sbjct: 577 SPNISAQTFSAGIAQYQTGIETSNLIKQCDEALYVAKRFGRNRV 620 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 19/301 (6%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 L ASR +RK R ++ ++ ++L+ +I++ANLA Y + Q Sbjct: 299 LLASRK---ERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQL 355 Query: 175 HTWEINMLGR-----RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 ++I R R+ I+ E G H + DGS V A + YG+ Sbjct: 356 TLYDIMEDDRSGVDWRINRILSEKVCFLGEH-----TVRAEDGSMVEVDLNANLVS-YGE 409 Query: 230 KLMLCIV-HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + ++C+V DI+E+KR E +L H AHHDA+TGL NR F+ G + + +++ Sbjct: 410 QQVICMVLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVI 469 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR--TPLD 346 +D DRFK IND GH GD +L +A L RK D + R GG+EF +++ TP D Sbjct: 470 YLDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPAD 529 Query: 347 TALSLAETIRVSVAKVSISGLPRF-TVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGR 404 + L + + V A + F T S+GV + + ++ ++L K D A+Y AK +GR Sbjct: 530 SLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGR 589 Query: 405 N 405 N Sbjct: 590 N 590 >UniRef50_C6MHA0 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MHA0_9PROT Length = 568 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 7/175 (4%) Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 +I + ++L E A D +T L NRR FY +P L S++++D D FK Sbjct: 390 NINQSEKLAA--EKRADIDLLTNLNNRRAFYKFVQPMWAISLRSKSSTSVIILDIDDFKL 447 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI-- 355 +ND YGH GD VL LA T++ AR GD++ RWGGEEF++ LP T L A+++A+ + Sbjct: 448 LNDNYGHPVGDLVLVRLAETIQKEARSGDILARWGGEEFLIFLPETQLADAITIADRMRK 507 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 R++ ++SI + FT S GVA + N S++EL + D LY AK GRNRV Sbjct: 508 RITTIQISIDNGEKISFTASFGVATTQDINVSLNELIAQADRQLYHAKKKGRNRV 562 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 23/306 (7%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 LKA ++ Q K+ F+ AP+ ++ + DG+IV N A GY+ + + Sbjct: 843 LKAEKA--LQESKERFHRAIV---DAPLPILIHAEDGEIVQVNHAWTELSGYHLDELSTI 897 Query: 175 HTWEINMLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD-- 229 W G R V ++ ++ + G + F + G TR + P+ D Sbjct: 898 ADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDFSSAPLGKLADGR 957 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD----- 284 +L++ + DITE+K+ EEQL H+ HD +TGL NR E Q + Q Sbjct: 958 RLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVE----QAIKRKQQQPNYL 1013 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 +++L ID DRFK +ND GH GD++L +A L+ C R D V R+GG+EFV+LL Sbjct: 1014 FAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLT 1073 Query: 345 LDT-ALSLAETIRVSV-AKVSISGLPRFT-VSIGVAHHEGNESI-DELFKRVDDALYRAK 400 + T A +A+ I + ++ FT SIG+ E EL + D A+YR+K Sbjct: 1074 IWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSK 1133 Query: 401 NDGRNR 406 GR R Sbjct: 1134 EAGRAR 1139 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 5/183 (2%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 ++ ++ DI+++K +E +L A D++TG NRR F + +LL++D Sbjct: 390 VIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLD 449 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND +GH GD+ L L L R D++ R GGEEF +LLP T + AL Sbjct: 450 VDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALIT 509 Query: 352 AETIRVSVAKVSI----SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 AE +R VA + + G FTVSIG+A + S++ + R D ALYRAK++GRNR Sbjct: 510 AERLRAQVADLRLDLPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRNR 569 Query: 407 VLA 409 V A Sbjct: 570 VCA 572 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 4/169 (2%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E+QL A D +T L NRRQF + + + S+L++D D FK IND YGH+ Sbjct: 209 EKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDINDHYGHA 268 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR--VSVAKVS 363 GDEV+ ++ R DL R GGEEF +LP T LD A +AE +R S A++S Sbjct: 269 VGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLRSLASSARLS 328 Query: 364 -ISGLPRFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLAA 410 +SG +TVSIGVA +E+ IDE+ R D LY+AK DGRNRV A Sbjct: 329 AVSGSLGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNRVSGA 377 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 29/295 (9%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR- 185 ++ ++ + F + + LID R+ IVDAN A +GY T +I G R Sbjct: 271 QRAYFTQLFANSPQAIALIDMHRN--IVDANKAFEALFGY--------RTADIQGFGMRA 320 Query: 186 -VMP--IMHEISHLPGG---HKPL--NFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCIV 236 ++P ++ E ++ KP+ V + DG V PIEI G+ + ++ I Sbjct: 321 FIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGETQGIVYIY 380 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG--QMQHLAIAQDYSLLLIDTDR 294 DI+E+K EEQ+ H A HDA+TGL NR F E + + +Q Y++L+ID ++ Sbjct: 381 QDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDSQ-YAVLMIDLNK 439 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAE 353 FK +ND GH GD++L +AR L C R D V R GG+EF ++L +++ E Sbjct: 440 FKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVE 499 Query: 354 TIRVSVAKVSI----SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 I V + K + + P ++ I V H + D+L + D A+YRAK GR Sbjct: 500 RIGVGLGKPFVLCGKTVTPEASIGI-VLHTRDYAAADDLLRDADIAMYRAKEQGR 553 >UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EST0_ARCB4 Length = 463 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 3/175 (1%) Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD-YSLLLIDTDRF 295 H + E + + LE A D +TG+ NR +F + ++Q I ++ S++L+D D F Sbjct: 280 HKVDELYSMAQTLEQQASIDILTGIFNRMKFEEFFDL-EVQKAKIQKNPLSIILLDIDDF 338 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K IND +GH +GDEV+ +++ L R D + RWGGEEFV+LLP T L+ A +A + Sbjct: 339 KRINDTFGHDEGDEVIKSISNLLTKNVRGTDTLSRWGGEEFVILLPNTSLEQAKIVANNL 398 Query: 356 RVSVAKVSIS-GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 R + + + + T S GVA + ++ ++LFKRVD LY+AKN G+N VL Sbjct: 399 RRIIFEHDFNVSQKKITCSFGVAIYNYEDTKEKLFKRVDKILYKAKNSGKNIVLG 453 >UniRef50_A6Q8K7 Signal transduction response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8K7_SULNB Length = 755 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%) Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 LE + D++T L NRR+ + + +++ + +SL+LID D FK+IND YGH GD Sbjct: 593 LEAISMIDSLTELFNRRKIDRLID-SEVKRIRTKGCFSLILIDIDNFKNINDSYGHDVGD 651 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP 368 VL +A+ L+S RK D RWGGEEF+++ P T + A AE IR+++ S + Sbjct: 652 IVLKHIAQILKSSVRKKDSAGRWGGEEFLIVCPDTSKEEAAKFAERIRIAIENESFEKIL 711 Query: 369 RFTVSIGVAHHEGNESIDE--LFKRVDDALYRAKNDGRNRVLAA 410 + T S+GVA + E+I + L +R+D ALY +K DG+NRV A Sbjct: 712 KVTASVGVAEY-NRENIGDTSLIRRLDKALYDSKRDGKNRVTVA 754 >UniRef50_B3QI56 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Rhizobiales RepID=B3QI56_RHOPT Length = 338 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 131/273 (47%), Gaps = 15/273 (5%) Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA 210 G+++ N AA GY+ +++ L + H G L V++ Sbjct: 52 GRVMFVNAAATKLLGYSQAEFLSMTVLDLDPLFDADIWRDHWREVESRGSFTLETVNRTK 111 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE-------HAAHHDAMTGLLN 263 DG V+ +E G K+ IV DITE+KR EQL A D +T + N Sbjct: 112 DGVDVAVEVTVNFVECLGRKMNCSIVRDITERKRAAEQLAEMHRKLVQANLTDELTAIAN 171 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE-SCA 322 RR+F + H+ SL+L+D D FK ND YGH +GD L +A ++ Sbjct: 172 RRRFDGVLSTSYATHMRSGAPLSLILLDIDHFKAFNDRYGHLEGDRCLQRIAEVIDRRMF 231 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----SGLPR-FTVSIGV- 376 R DL RWGGEEFV +LP T AL++A +R ++ ++I S + R T S+GV Sbjct: 232 RAADLAARWGGEEFVCILPDTDEAGALAVATALREAILDLAIPHEASPIARVVTASLGVV 291 Query: 377 -AHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 A +++ LF+ D LY AKN GRNR++ Sbjct: 292 TATCVPDKTAHSLFETADALLYEAKNLGRNRIV 324 >UniRef50_C6CQG0 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=C6CQG0_DICZE Length = 491 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 + +LE A D +TGL+NR+ F ++ +++ + +S++LID D FK IND YGH Sbjct: 323 QRRLELMATTDKLTGLMNRQAFEYVFRTLRIKQSTQHRTFSIILIDLDYFKKINDQYGHH 382 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD VL AR ++ RK D RWGGEEFVLLL A +AE IR ++ +S Sbjct: 383 VGDRVLVRTARLIQRTIRKTDSACRWGGEEFVLLLADCSRSQAHFIAEKIRRAIRFALVS 442 Query: 366 ---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + T+S G+A ESID L +R D+ALY+AK GR++ + A Sbjct: 443 HQHQVINLTISCGIAESHPGESIDHLVQRADNALYQAKRQGRDQAVIA 490 >UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TUA2_ACIAC Length = 591 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 4/167 (2%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 ++LE+ A D +TGL NRR+F + + + ++L+++D D FK +ND +GH Sbjct: 419 QELENLAVRDPLTGLYNRRRFDEALQAYTARCRELGHRFALMIVDADHFKRVNDTHGHQT 478 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD--TALSLAETIRVSVAKVSI 364 GD VL LA + C R D + R+GGEEFV+L+P P D +AE IR++V Sbjct: 479 GDAVLRHLAGVITGCVRSTDFIARFGGEEFVVLMP-EPRDREEGRFVAEKIRLAVGHTPF 537 Query: 365 SGLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 G+ TVSIG+A H G E + + +R D ALY+AK +GR+RV A Sbjct: 538 PGVGHLTVSIGLAFCHGGGEPLATILERADKALYQAKEEGRDRVCVA 584 >UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S1M7_ALTMD Length = 949 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 +L L + + + + E+L + D++TGL NRR F + + +SLLL Sbjct: 767 ELALKVEEKTKDLEEVVEKLTRLSTQDSLTGLKNRRYFTQRAKAEWQEFQRHGHTFSLLL 826 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 +D D FK IND YGH GD VL +A+ L+S R+ D++ RWGGEEF++LLP A Sbjct: 827 LDIDYFKRINDEYGHQTGDSVLVKIAKILQSSLRESDVIARWGGEEFLILLPSLKEQEAY 886 Query: 350 SLAETIRVSVAKVSISGLP---RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 +AE +R +VA + I P T++ GVA + +SI+ VD LY+ K GRN Sbjct: 887 WVAEKLRKAVASLVIDSPPYQLNVTITCGVADIKNYDSIEACIHAVDKKLYKGKEAGRNA 946 Query: 407 VL 408 V+ Sbjct: 947 VV 948 >UniRef50_Q21GB7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GB7_SACD2 Length = 303 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 104/184 (56%), Gaps = 6/184 (3%) Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 K M I H + R ++L A+HD +T +LNRR F + + Q + LLL Sbjct: 117 KAMGRIAHMKNQLARANKELMKLANHDGLTKILNRRGFDEVMDRYWRQARRDQSEIGLLL 176 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLE-SCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ID D FK ND YGH +GDE L A+A ++E + R D+ R+GGEEF +LLP T ++ A Sbjct: 177 IDIDHFKAYNDTYGHVRGDETLSAVAHSIEKALMRPIDIAARYGGEEFAVLLPCTGMEGA 236 Query: 349 LSLAETIRVSVAKVSISGLPR-----FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDG 403 +++ + I ++ +I L TVSIGVA G S ++L KR D ALY+AK G Sbjct: 237 MTVGDRILEAIRDEAIPHLTSPVKSFLTVSIGVALSSGLASAEDLIKRADAALYQAKERG 296 Query: 404 RNRV 407 RNRV Sbjct: 297 RNRV 300 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/222 (39%), Positives = 118/222 (53%), Gaps = 21/222 (9%) Query: 204 NFVHKLADGSTRHVQTYA-------GPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHD 256 NF +G R + T A G I YG L D+TE K+ E L+ A D Sbjct: 240 NFRICAENGDVRWIHTEASASHPGDGSIVFYGSML------DVTELKQSETLLQVLAQTD 293 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 ++TG+ NRR F + Q ++ + SLL+ID DRFK ND YGHSKGD + ++ Sbjct: 294 SLTGIANRRHFDERYQHLWRQQESMQKPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVE 353 Query: 317 TLESCARKGD-LVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----SGLPRFT 371 TL + + L+ R+GGEEF+++LP T AL LAE R +V + I S T Sbjct: 354 TLAAQLPSSECLLGRYGGEEFIMVLPETDHRQALILAERCRQAVESMEIPHTKSPQGVVT 413 Query: 372 VSIGVAHHEGNE---SIDELFKRVDDALYRAKNDGRNRVLAA 410 VSIGVA + E S+ +L D ALYRAK+ GRNRV A+ Sbjct: 414 VSIGVAAAKPGETGSSMTQLSNDADQALYRAKHQGRNRVEAS 455 >UniRef50_C0GRX7 Diguanylate cyclase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRX7_9DELT Length = 365 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 1/161 (0%) Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 L+ A D +TGL NRR E + + S+++ D D FK +ND YGHS+GD Sbjct: 204 LQELASTDMLTGLANRRAAEDFLEKQAYANRRYGRKVSVIMADVDLFKQVNDKYGHSRGD 263 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP 368 VL L R L + R+ DLV RWGGEEF+++ P + A LAE R ++A ++G+ Sbjct: 264 MVLVELGRILRNSLRETDLVARWGGEEFLIVAPEIDMQEAKELAERCRCAIASRQVAGI- 322 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 T+S GV +S+D + R D+ LY+AK+ GRN ++A Sbjct: 323 NLTMSFGVTELREKDSVDTVLSRADNLLYKAKSSGRNLIVA 363 >UniRef50_A3J836 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J836_9ALTE Length = 588 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 102/181 (56%), Gaps = 4/181 (2%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 LML + + + + E A D +TGL NRR F + E ++ + +I Sbjct: 391 LMLALADLVRKNEEARTAAEQNAQTDLLTGLSNRRGFLPVAESLWSLVTRKNRNVCVAMI 450 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D DRFK+IND YGH+ GD+VL +A L R+GDL+ RWGGEEF LLLP T AL Sbjct: 451 DIDRFKNINDQYGHAVGDKVLKVIADELYRSRRRGDLLARWGGEEFTLLLPETSEAEALK 510 Query: 351 LAETIRVSVAKVSISGLPRF---TVSIGV-AHHEGNESIDELFKRVDDALYRAKNDGRNR 406 +AE R ++ ++ + R T+SIGV + H + ++D+ R D+ LYRAK GRN+ Sbjct: 511 VAERFRHNIEQLVTNDRGRVIQCTISIGVTSRHSEHVTLDQAIARADEELYRAKLQGRNQ 570 Query: 407 V 407 V Sbjct: 571 V 571 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 17/166 (10%) Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD----YSLLLIDTDRFKHINDLYGHSKGD 308 A DA+TGLLNRR F P + +D + L++ID D FK +ND YGH GD Sbjct: 176 AETDALTGLLNRRGFESRLHP-------LLKDPQSCFCLIMIDIDHFKRVNDTYGHLVGD 228 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA----KVSI 364 +L ALA L+ + D + R+GGEEF++LLP T L+ A ++AE IR +A K Sbjct: 229 SILKALANLLKQQTKGKDCLARFGGEEFIILLPETRLEQAGAVAEDIRKKLAAQEWKQRK 288 Query: 365 SGLP--RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 +G P + T+S+GV + NES L RVD ALY AK +GRNRV+ Sbjct: 289 TGKPMGKITISLGVTQYRPNESEVTLIHRVDTALYTAKRNGRNRVV 334 >UniRef50_UPI0001AEB9E1 diguanylate cyclase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEB9E1 Length = 586 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 100/181 (55%), Gaps = 9/181 (4%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF----YHITEPGQMQHLAIAQDYS 286 L + + + + ++ E A D +T L NRR F Y I E G+ + + S Sbjct: 397 LSISLAFNYKQVQQARRNAERDARLDPLTSLYNRRAFEDLVYPIWEMGKRSN----KFMS 452 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 ++LID D FK IND YGH GD+VL +A ++ R D+ FRWGGEEF++ LP T + Sbjct: 453 VMLIDIDWFKGINDKYGHDMGDKVLKKVAEEIKGQVRGSDITFRWGGEEFLVFLPNTRVH 512 Query: 347 TALSLAETIRVSVAKVSISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 A +AE +RV + I+ R TVSIGVA G E I+ L K+ D ALY AK GRN Sbjct: 513 YAKQIAENLRVHLFTHDINKFIRVTVSIGVAGTSPGEEDINVLIKQSDQALYLAKAKGRN 572 Query: 406 R 406 + Sbjct: 573 K 573 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 94/161 (58%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 E+++ A D +TG NR Q + E + SL++ D D FK IND YGH+ Sbjct: 179 EKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNI 238 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GD+VL T+++ RK D + R+GGEEF+++ P + A ++AE IR V + + G Sbjct: 239 GDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEG 298 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +P T+S+GVA + +ESI + K+ D ALY AK G+NRV Sbjct: 299 IPEITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNRV 339 >UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frankia RepID=Q2JCX5_FRASC Length = 562 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/184 (42%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 231 LMLCIVHDITEQKR--LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 LML I + +R L +L HAA DA T L N + + E + + + S+L Sbjct: 369 LMLAITPPVLLLQRSLLHAELLHAARSDAKTRLANPAYWRQVAEREINRACQVGRPLSVL 428 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 L+D D FK +ND +GH GD +L A+A L + R DLV R+GGEEFV+LL L+ A Sbjct: 429 LVDIDHFKRVNDRFGHLIGDVILIAVADALRAATRPRDLVGRFGGEEFVVLLTEVELENA 488 Query: 349 LSLAETIRVSVAK--VSISGLPRF--TVSIGVAHHEGNES-IDELFKRVDDALYRAKNDG 403 +AE IR VA + G P TVS+GVA H G + L R D ALYRAK DG Sbjct: 489 ADVAERIRRQVAGTHCRLEGRPPLSVTVSVGVATHHGPRGDLAGLIARADSALYRAKADG 548 Query: 404 RNRV 407 RNRV Sbjct: 549 RNRV 552 >UniRef50_Q2SLT6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLT6_HAHCH Length = 928 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 37/309 (11%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 L A + + QR+ Y + F A +++DP+ + +++DAN AA +F+G++ E M Sbjct: 362 LTAGQLESSQRR----YRQMFEHCDAVQIILDPT-NNKVIDANPAACDFFGFSSEMMGNI 416 Query: 175 HTWEI------NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + MLG +P + + + D + V+ Y I+ Sbjct: 417 SASRLFLSENNEMLGENWLPSLQSGKTVIAARR--------GDNRSSLVEMYVSDIKDKA 468 Query: 229 DKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + IVHDIT++KR EEQ+ A++D +T L NR + H ++L Sbjct: 469 SSYLYLIVHDITDRKRSEEQIRLQAYYDPLTRLPNRSYLFEHLNSLIASHKREQARLAVL 528 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ID DRFK +ND GH GD++L ++ L+S R+ D++ R GG+EF ++LP Sbjct: 529 FIDLDRFKQVNDNLGHGVGDKLLQQVSTRLKSRLRESDMLARLGGDEFTVVLPHLR---- 584 Query: 349 LSLAETIRVSVAKVSISGLP-RFTV---------SIGVA-HHEGNESIDELFKRVDDALY 397 ET + VAK+ + L F+V SIGV + E L K D A+Y Sbjct: 585 ---EETDAIHVAKMLLQQLADSFSVGDYELHIGASIGVTLFPKDGEDASTLIKNADIAMY 641 Query: 398 RAKNDGRNR 406 +AK++GRN+ Sbjct: 642 KAKDNGRNQ 650 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 101/186 (54%), Gaps = 7/186 (3%) Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 L + + + ++ EE+L A D +TGL NRR F E + A S+LLI Sbjct: 306 LAVLFSYQLRYRRAAEEELRVLARTDGLTGLNNRRTFEEHAEDEWRRAQRNAWPLSMLLI 365 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D D FK NDLYGHS GD+ L A+AR + +S R GD R+GGEEF +LLP T A Sbjct: 366 DVDSFKGFNDLYGHSAGDDALTAVARCISQSVRRPGDTAARYGGEEFAVLLPDTDETGAA 425 Query: 350 SLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEGN--ESIDELFKRVDDALYRAKNDG 403 +AE IR +V + + S TVSIG+A G + L DDALY AK+ G Sbjct: 426 FIAEKIRAAVQALQLRHVASSQHVLTVSIGIATTRGEAFATSRALLNAADDALYEAKDAG 485 Query: 404 RNRVLA 409 RNRVL+ Sbjct: 486 RNRVLS 491 >UniRef50_A9CTZ9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CTZ9_9RHIZ Length = 548 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 146/299 (48%), Gaps = 56/299 (18%) Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL---- 196 P++++ PS G +++ N AA G+++ET+ +P H + L Sbjct: 239 PIVVLAPS--GLVLEMNPAAEKLTGFSNETVGT------------TLPPFHPLMGLVAAD 284 Query: 197 --PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK-LMLCIVHDITEQK---------- 243 PG KP+ VH A G V P+E +G + ++ ++ D+TE++ Sbjct: 285 GGPGTKKPI--VHFAAMGKIFEVSVQ--PLERWGRQGSIMFVLRDVTEREAAQQSLSDTG 340 Query: 244 -----------RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD---YSLLL 289 RL+E+LE A D +TGL NRR P LA A++ SL++ Sbjct: 341 KALKLRLEENLRLQEKLERQAFEDHLTGLFNRRHASSTMPP----VLASAREDAPVSLII 396 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 +D D FK +ND +GH GD+VL A AR L + G++ FR+GGEEF+++LP + AL Sbjct: 397 VDLDYFKQVNDRHGHDVGDKVLQAFARILSDSLQAGEIAFRYGGEEFLIVLPGAGRNQAL 456 Query: 350 SLAETIRVSVAKVSISGLP--RFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 R +A ++I L + + S G+A E S+ E K D ALYRAK GRN Sbjct: 457 ERCSLWRQELAALTIVELKDDQLSFSAGIAFAPEAGASLTECTKAADIALYRAKISGRN 515 >UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2U9_NITSB Length = 483 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 7/161 (4%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 + L+ AA D++T L NRR ++ L + ++ D D FK+ ND YGH K Sbjct: 327 DTLKDAALKDSLTHLFNRRAL-----KSFLKTLKPNSRFGIIFCDIDHFKNFNDRYGHDK 381 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL +A+TL RK D + RWGGEEF+++LP L+ + AE +R ++ +S Sbjct: 382 GDEVLQEVAKTLSKFVRKDDFLARWGGEEFLIVLPNISLEDLKNRAEKMRQAIENIS-KD 440 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 +P T S GV E IDE KR D+ALYRAK GRNRV Sbjct: 441 IP-VTCSFGVTVCEDASHIDECIKRADEALYRAKEKGRNRV 480 >UniRef50_Q2LX62 Ggdef family protein / response regulator receiver domain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LX62_SYNAS Length = 498 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%) Query: 204 NFVHKLADGSTRHV-QTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 + V L G+ +V + ++ P+ + + + + + + + L +LE + HD +T + Sbjct: 281 DIVSALDCGANDYVAKPFSLPVVLARVRTQMMLKQTVADLENLNRKLEKLSLHDGLTNIP 340 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR F E Q++ SL+L+D D FK ND YGH GD+VLC +A L S Sbjct: 341 NRRCFNETFEREQLRTRRNGMPLSLILLDVDFFKRYNDTYGHEAGDQVLCRVADLLVSAT 400 Query: 323 -RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-----FTVSIGV 376 R GD+VFR+GGEEFV+LLP TP A +AE I ++ +++I L T S+G+ Sbjct: 401 DRGGDMVFRYGGEEFVILLPETPAAGARFVAERIHSAIQQLAIPHLTSTVAHHLTASMGI 460 Query: 377 AHH--EGNESIDELFKRVDDALYRAKNDGRN 405 A ES LF+R D LY+ K GRN Sbjct: 461 ATATPSDKESYYTLFERADSQLYKVKASGRN 491 >UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVU6_DICD5 Length = 483 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 8/191 (4%) Query: 228 GDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 G+ + + DIT+ K+ E L+ A D++TG+ NRR F + QH +I SL Sbjct: 285 GNTVFYGSMLDITDLKQSETLLQVLAQTDSLTGIANRRHFDERYQQLWRQHESIQMPLSL 344 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGD-LVFRWGGEEFVLLLPRTPLD 346 L+ID DRFK ND YGHSKGD + ++ TL + L+ R+GGEEF ++LP+T Sbjct: 345 LMIDIDRFKRFNDSYGHSKGDACIKSVVETLAGQLPSSECLLGRYGGEEFTVVLPQTDYQ 404 Query: 347 TALSLAETIRVSVAKVSI----SGLPRFTVSIGVA---HHEGNESIDELFKRVDDALYRA 399 AL+LAE R +V + I S TVSIGVA + S+ +L DDALYRA Sbjct: 405 QALALAERCRQAVESMEIPHTKSPQGVVTVSIGVAVARPGDAGSSMTQLSNDADDALYRA 464 Query: 400 KNDGRNRVLAA 410 K+ GRNRV A Sbjct: 465 KHLGRNRVEAG 475 >UniRef50_A4GA83 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GA83_HERAR Length = 492 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 5/171 (2%) Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 R + +LE A D +TGLLNR+ F + + + S +L D D FK +ND +G Sbjct: 314 RYQRRLEQIAGTDTLTGLLNRQAFEIVFQQAILDSERRRIPLSAILFDIDFFKMVNDNHG 373 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA--- 360 H GD +L ++A ++ R+ D+V RWGGEEF++LL PL+ A +LAE IR +A Sbjct: 374 HLAGDRILQSIAAITKNAVRESDIVTRWGGEEFLVLLKDCPLEQATALAEKIRSMIAGHD 433 Query: 361 -KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ S L TVS+GVA + E+ F R D ALY+AK++GRNRV+ + Sbjct: 434 FELPASAL-HLTVSLGVAEYAYRETWLSFFGRADTALYQAKSEGRNRVIVS 483 >UniRef50_Q5E0N3 GGDEF domain protein n=3 Tax=Aliivibrio RepID=Q5E0N3_VIBF1 Length = 442 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 10/152 (6%) Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D MTGL RR FY + ++ HL D S++++D D+FK IND YGHSKGDEV+ + Sbjct: 296 DDMTGLY-RRDFYEM----KLNHLL---DKSIIIVDIDKFKSINDKYGHSKGDEVITEVC 347 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIG 375 R L C R DL RWGGEEFV++L + +E IRVSV++ I+G+ +VSIG Sbjct: 348 RRLRQCIRGDDLAIRWGGEEFVIVLSNVSSIDLFNRSEAIRVSVSESPIAGM-NVSVSIG 406 Query: 376 VAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 A + + S K D ALY++KN GRN+V Sbjct: 407 AAIGKKS-SFKRTLKMADTALYQSKNAGRNKV 437 >UniRef50_B5IMB7 Diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMB7_9CHRO Length = 275 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/164 (43%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 L+ +A HD +TG+ NRR + YSL LID D FK IND YGH+ GD Sbjct: 103 LQLSATHDILTGVPNRRLISERCRAEDARTTRYGSTYSLALIDVDNFKRINDSYGHTTGD 162 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI-------RVSVAK 361 +VL LA L+SC R+ DL RWGGEEF+ L T L+TA +A+ I RV Sbjct: 163 QVLVELAAVLKSCVREFDLCARWGGEEFLALFVDTGLETAEIIAQRILDMVRHLRVKAGS 222 Query: 362 VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 +S TVSIGVA H +E F R D ALY AK+ GR+ Sbjct: 223 EELS----LTVSIGVAQHAPSELYTNTFARADQALYEAKHSGRD 262 >UniRef50_A6T3M4 Diguanylate cyclase n=2 Tax=Oxalobacteraceae RepID=A6T3M4_JANMA Length = 408 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 6/166 (3%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL--IDTDRFKHINDLYGH 304 + +E A D + G NRR Y + Q + +A L L ID D FK +ND GH Sbjct: 234 KDIEEDARRDVLLGCFNRR--YIVAALEQQKRMADESGAPLCLAVIDLDHFKRVNDEAGH 291 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GDEVL AR ES RK D+ R+GGEEF+L+LP TPL AL+++E IR + + Sbjct: 292 LGGDEVLRTFARVAESNVRKHDIFGRYGGEEFLLVLPETPLSAALNISERIRTQIEQHDW 351 Query: 365 SG--LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 G R TVSIG+ + ES+ +LF R D A+Y AK GRN+V+ Sbjct: 352 QGKLRNRVTVSIGLTQYIAGESVLDLFSRTDTAMYMAKQSGRNQVV 397 >UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E99 Length = 994 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 29/209 (13%) Query: 208 KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 + ADGS +H L + D++E+ R E QL+H A HD +TGLLNRR F Sbjct: 535 RAADGSPQH---------------FLGQIQDVSERVRYEAQLQHMADHDPLTGLLNRRSF 579 Query: 268 YHITEPGQMQHLAIAQDY----SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 E QH+ + Y + L++D DRFKHIND GH+ GDE++ +A+TL S R Sbjct: 580 ----ERELNQHIHRVERYGAEGAALVLDIDRFKHINDTLGHNVGDELIVKVAQTLRSRLR 635 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPR-FTVSIGVA-- 377 D++ R GG+EF +LLP+ A ++AE+I SV S+ +G R T S+G+A Sbjct: 636 DSDVLARLGGDEFAVLLPKGGQQEAEAVAESILASVRAQSVLTTAGRRRPITTSVGIALF 695 Query: 378 HHEGNESIDELFKRVDDALYRAKNDGRNR 406 G S +++ D A+Y AK GR+R Sbjct: 696 GETGGLSAEDVLVNADLAMYDAKEAGRDR 724 >UniRef50_B2TGJ2 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2TGJ2_BURPP Length = 381 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 8/182 (4%) Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 ++ + HD RL E+LE A+ D +TG L+RR F I + L +L +ID Sbjct: 205 VVMLAHD-----RLAERLERLANVDDLTGALSRRAFLAIGDALLKASLRTRSPVALAIID 259 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK +ND YGH+ GD+VL A + R GD+ R GGEEF +L P T A+SL Sbjct: 260 IDSFKAVNDNYGHAAGDQVLSHFATFVARNLRVGDVFGRLGGEEFGVLCPATTTAEAVSL 319 Query: 352 AETIRVSVAKVSISGLP---RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + +R +A + LP R+T S+GV +ES+ +L R D ALY AK GRNRV+ Sbjct: 320 LDRLRGRLAGAAADELPRGLRYTFSVGVDQLRRDESLAQLMARADGALYAAKASGRNRVM 379 Query: 409 AA 410 AA Sbjct: 380 AA 381 >UniRef50_C4XGF2 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGF2_DESMR Length = 687 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Query: 238 DITEQKRLE-------EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 DIT +K +E +LE + D +TG+ NRR+F +H SL+++ Sbjct: 348 DITVRKLMEIALAESNRKLEALSATDPLTGIANRRRFDEAFAGEYARHARTGAPLSLVML 407 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESC-ARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D D FK+ ND YGH++GD L A+AR + C R GDL R+GGEEF+ LLP T Sbjct: 408 DIDYFKNFNDAYGHAQGDACLAAVARAMAGCLQRPGDLAARYGGEEFICLLPDTSPRGTR 467 Query: 350 SLAETIRVSVAKVSI-----SGLPRFTVSIGV--AHHEGNESIDELFKRVDDALYRAKND 402 ++AE+IR +VA ++I S TVSIG A + +LF++VD LY+AK + Sbjct: 468 TVAESIREAVAALAIPHARSSAAAVVTVSIGALTAACPPDADPGDLFRQVDALLYKAKEN 527 Query: 403 GRNRVLAA 410 GRNRV A Sbjct: 528 GRNRVEAG 535 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/171 (43%), Positives = 102/171 (59%), Gaps = 8/171 (4%) Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHI--TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 EE L+ AA D +TG+ NR +F + TE G+ + S+++ D D FK +ND +G Sbjct: 135 EEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTP--LSIIIADIDHFKSVNDTFG 192 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H+ GD VL ++A + S R D RWGGEEF+LLLP T LD A +AE +R +V+++S Sbjct: 193 HNAGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELS 252 Query: 364 ISGLPR---FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV-LAA 410 I T+S+GV ++DE + VD ALYRAK GRNRV LAA Sbjct: 253 IPWEGESIAVTLSMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVELAA 303 >UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q191_NITSB Length = 622 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 7/262 (2%) Query: 152 QIVDANLAALNFYGYN-HETMCQKHT-WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL 209 +I+ N + G+ E + +K+T + + R+ ++ S + G K NF+ + Sbjct: 362 EIIKINKKMMEILGFTKEEILGKKYTKFVTSRFQDRIKTVLR--SAVEQG-KVENFIAEF 418 Query: 210 ADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYH 269 + R + I + + +L D T E+ L AA D +T L NR Y Sbjct: 419 TAKNGRIKILKSSIIFLPDQERLLITCEDYTAVYLREQNLIKAAQTDVLTNLPNRSA-YQ 477 Query: 270 ITEPGQMQHLAIAQD-YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 + QM Q +S+L ID D FK IND YGH GD+VL +A+ + R D V Sbjct: 478 MKLEEQMSLFERYQTVFSMLCIDIDHFKKINDTYGHKAGDKVLQEVAKIMRKTLRSSDTV 537 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDEL 388 FR GGEEFV LLP T L A A+ +R + G TVSIGV +++ D + Sbjct: 538 FRIGGEEFVALLPETDLVAAKQAAQKLRTMIQDQMKLGSYNVTVSIGVTQVNFDDTYDSI 597 Query: 389 FKRVDDALYRAKNDGRNRVLAA 410 F R D LY AK +GRN+V+++ Sbjct: 598 FMRCDKCLYHAKQNGRNQVVSS 619 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 8/176 (4%) Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E ++ EQL + D +T + NRR+F E + L + SL+L+D D FK +ND Sbjct: 378 ELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVND 437 Query: 301 LYGHSKGDEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 +GH GD+ L ALA L + R GDLV R+GGEEF +LLP T + A +AE +R+SV Sbjct: 438 RFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMRLSV 497 Query: 360 AKVSISGLP-----RFTVSIGVAHHEGNESID--ELFKRVDDALYRAKNDGRNRVL 408 A+ ++ T+S+GVA N D EL +R D+ALY AK+DGRNRV+ Sbjct: 498 ARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVV 553 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 + +E LE A HD++TGL NRR F + SL+++D D FK ND Y Sbjct: 335 REAQEALEVIATHDSLTGLANRRLFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTY 394 Query: 303 GHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 GH GD L +A+ L+ C RK DL R+GGEEF +LLP T + AL++AE IR SV + Sbjct: 395 GHVAGDHCLTEVAQALKGCCQRKADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRRSVMQ 454 Query: 362 VSI--SGLPRFTVSIGVAHHE----GNESIDELFKRVDDALYRAKNDGRNRVLA 409 +I SG P V++ + + G +SI+ +R D ALY+AK GRNR +A Sbjct: 455 RNIAHSGSPVGCVTVSLGCYAFVPTGRDSIEMFIERADAALYQAKATGRNRAMA 508 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobact... 614 e-174 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 550 e-155 UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 T... 501 e-140 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 351 4e-95 UniRef50_Q1Z3E3 Putative uncharacterized protein n=2 Tax=Photoba... 345 2e-93 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 340 7e-92 UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 1e-91 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 333 6e-90 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 330 5e-89 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 329 1e-88 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 326 1e-87 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 325 2e-87 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 319 1e-85 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 318 2e-85 UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 316 8e-85 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 316 1e-84 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 315 2e-84 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 315 2e-84 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 312 1e-83 UniRef50_A8V293 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 311 2e-83 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 311 3e-83 UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 310 6e-83 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 309 1e-82 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 307 6e-82 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 306 1e-81 UniRef50_A8FUM2 Putative uncharacterized protein n=1 Tax=Shewane... 304 4e-81 UniRef50_C1SNU0 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 303 1e-80 UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 T... 302 1e-80 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 302 2e-80 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 301 3e-80 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 300 5e-80 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 300 8e-80 UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campy... 299 9e-80 UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 T... 299 1e-79 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 299 1e-79 UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 298 3e-79 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 297 6e-79 UniRef50_Q6ALC0 Putative uncharacterized protein n=1 Tax=Desulfo... 296 8e-79 UniRef50_D1SVG0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 296 1e-78 UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 T... 295 2e-78 UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with... 294 3e-78 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 294 3e-78 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 294 4e-78 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 9e-78 UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 292 1e-77 UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 292 1e-77 UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 292 1e-77 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 292 2e-77 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 292 2e-77 UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pel... 291 3e-77 UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 290 4e-77 UniRef50_C1SNT9 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 290 4e-77 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 6e-77 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 289 1e-76 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 289 1e-76 UniRef50_Q2BQ31 PAS/PAC sensor hybrid histidine kinase n=1 Tax=N... 289 2e-76 UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 289 2e-76 UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella av... 288 2e-76 UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=... 287 5e-76 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 287 5e-76 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 287 7e-76 UniRef50_B6BNR7 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 287 8e-76 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 286 8e-76 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 286 9e-76 UniRef50_B3QI56 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 286 9e-76 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 286 1e-75 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 286 1e-75 UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfo... 285 2e-75 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 285 2e-75 UniRef50_C8X2Z9 Diguanylate cyclase with PAS/PAC and GAF sensors... 285 3e-75 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 284 3e-75 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 284 3e-75 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 283 9e-75 UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 283 1e-74 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 282 1e-74 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 282 1e-74 UniRef50_C0GLD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 282 2e-74 UniRef50_A4B9R1 Predicted signal transduction protein containing... 282 2e-74 UniRef50_A8FVJ0 Sensory box/GGDEF domain protein n=2 Tax=Shewane... 281 3e-74 UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteob... 281 4e-74 UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 281 4e-74 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 280 4e-74 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 280 6e-74 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 280 7e-74 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 280 8e-74 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 279 1e-73 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 279 2e-73 UniRef50_A1VAH5 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 279 2e-73 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 278 3e-73 UniRef50_Q47FH1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 278 3e-73 UniRef50_Q2SLT6 Predicted signal transduction protein containing... 277 5e-73 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 277 6e-73 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 277 6e-73 UniRef50_Q30YD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 277 6e-73 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 277 7e-73 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 276 8e-73 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 276 9e-73 UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitrati... 276 9e-73 UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/P... 275 2e-72 UniRef50_Q7MSI2 Putative uncharacterized protein n=1 Tax=Wolinel... 275 3e-72 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 275 3e-72 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 274 3e-72 UniRef50_A0L7G7 Response regulator receiver modulated diguanylat... 274 3e-72 UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butz... 274 4e-72 UniRef50_Q6AJN6 Putative uncharacterized protein n=1 Tax=Desulfo... 274 5e-72 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 8e-72 UniRef50_C0QPE2 Diguanylate cyclase/phosphodiesterase domain 1 n... 273 1e-71 UniRef50_B3E5T6 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 273 1e-71 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 1e-71 UniRef50_A0LBU1 Response regulator receiver modulated diguanylat... 273 1e-71 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 272 1e-71 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 1e-71 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 272 1e-71 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 272 1e-71 UniRef50_Q6AKT7 Putative uncharacterized protein n=1 Tax=Desulfo... 272 1e-71 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 272 1e-71 UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 272 2e-71 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 2e-71 UniRef50_C5V4E8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 2e-71 UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 272 2e-71 UniRef50_C6MQF9 Response regulator receiver modulated diguanylat... 271 3e-71 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 271 3e-71 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 271 3e-71 UniRef50_B9Z7T9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 271 4e-71 UniRef50_Q083J4 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 270 6e-71 UniRef50_A1TGQ8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 6e-71 UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 8e-71 UniRef50_A1WTU4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 9e-71 UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 9e-71 UniRef50_Q2JJQ3 Sensory box protein n=1 Tax=Synechococcus sp. JA... 269 1e-70 UniRef50_C3JZH6 Putative regulatory protein n=2 Tax=Pseudomonas ... 269 1e-70 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 268 2e-70 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 268 2e-70 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 268 2e-70 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 3e-70 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 267 4e-70 UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 267 5e-70 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 267 7e-70 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 267 7e-70 UniRef50_Q7UR09 Probable response regulatory protein n=1 Tax=Rho... 267 7e-70 UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Ta... 267 7e-70 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 266 1e-69 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 266 1e-69 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 266 1e-69 UniRef50_A8MEQ5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 2e-69 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 2e-69 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 265 2e-69 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 265 3e-69 UniRef50_A4JR79 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=... 264 4e-69 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 264 4e-69 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 264 4e-69 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 264 4e-69 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 5e-69 UniRef50_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors... 263 8e-69 Sequences not found previously or not previously below threshold: UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteri... 298 3e-79 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 290 5e-77 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 290 6e-77 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 285 2e-75 UniRef50_B6BH53 Sensory box/ggdef family protein n=1 Tax=Campylo... 284 4e-75 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 283 8e-75 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 2e-74 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 282 2e-74 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 280 5e-74 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 280 5e-74 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 279 1e-73 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 279 1e-73 UniRef50_C4XMB2 Putative signaling protein n=1 Tax=Desulfovibrio... 278 2e-73 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 278 3e-73 UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 T... 277 4e-73 UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 277 5e-73 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 277 5e-73 UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU 277 5e-73 UniRef50_C5S5K7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 277 6e-73 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 276 9e-73 UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and heme... 276 9e-73 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 276 1e-72 UniRef50_A0L7S5 Response regulator receiver modulated diguanylat... 275 2e-72 UniRef50_B6BK11 Ggdef/pas/pac-domain containing protein n=1 Tax=... 275 2e-72 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 275 3e-72 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 275 3e-72 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 275 3e-72 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 274 3e-72 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 274 7e-72 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 8e-72 UniRef50_B8FWQ7 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 273 8e-72 UniRef50_C4K9W4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 2e-71 UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 271 3e-71 UniRef50_C4KDN7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 271 4e-71 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 4e-71 UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 5e-71 UniRef50_Q2RT37 Response regulator receiver modulated diguanylat... 270 5e-71 UniRef50_C5V5L2 Response regulator receiver modulated diguanylat... 270 6e-71 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 6e-71 UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiob... 270 7e-71 UniRef50_B2T333 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 7e-71 UniRef50_A5EDY2 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 270 9e-71 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 270 9e-71 UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candida... 269 1e-70 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 1e-70 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 1e-70 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 3e-70 UniRef50_C5V180 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 3e-70 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 268 3e-70 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 3e-70 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 268 4e-70 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 267 4e-70 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 267 5e-70 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 267 6e-70 UniRef50_B7GIF3 Response regulator with a diguanylate cyclase ou... 267 6e-70 UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxen... 267 7e-70 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 267 8e-70 UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 9e-70 UniRef50_D0L073 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 266 1e-69 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 266 1e-69 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 1e-69 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 265 2e-69 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 2e-69 UniRef50_Q2S9L1 Predicted signal transduction protein containing... 265 2e-69 UniRef50_Q2SHY3 FOG: GGDEF domain n=1 Tax=Hahella chejuensis KCT... 265 2e-69 UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 265 2e-69 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 2e-69 UniRef50_Q2BH87 Diguanylate cyclase/phosphodiesterase domain 1 (... 265 2e-69 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 265 2e-69 UniRef50_B1WQD2 Probable regulatory components of sensory transd... 265 2e-69 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 265 2e-69 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 265 2e-69 UniRef50_Q2BMB7 Sensory box/GGDEF domain protein n=1 Tax=Neptuni... 265 3e-69 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 265 3e-69 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 265 3e-69 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 3e-69 UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 264 3e-69 UniRef50_B1Y499 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 3e-69 UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 3e-69 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 264 4e-69 UniRef50_Q55955 Sll0779 protein n=1 Tax=Synechocystis sp. PCC 68... 264 4e-69 UniRef50_C7RS23 Response regulator receiver modulated diguanylat... 264 5e-69 UniRef50_B1WPX1 Two-component response regulator n=5 Tax=Chrooco... 264 5e-69 UniRef50_A6FEG5 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 264 5e-69 UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphoh... 263 5e-69 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 5e-69 UniRef50_C4L7R2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 6e-69 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 6e-69 UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 6e-69 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 6e-69 UniRef50_B5JS67 Gaf/pas/ggdef domain protein n=1 Tax=gamma prote... 263 7e-69 UniRef50_A3QDK0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 7e-69 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 263 7e-69 >UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobacteriaceae RepID=YDAM_ECOLI Length = 410 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 410/410 (100%), Positives = 410/410 (100%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK Sbjct: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS Sbjct: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN Sbjct: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT Sbjct: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND Sbjct: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA Sbjct: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA Sbjct: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 221/414 (53%), Positives = 286/414 (69%), Gaps = 4/414 (0%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ + L++L++PVW+V P ++L++AN A+ + D +R G +S +Q++L Sbjct: 18 MLIAYLDALNILSTPVWVVMPKNQELLFANKEARKIAGDCQLPLMRNGRFSAHAQQQLDA 77 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR- 119 YL L I+EI T+Q LSCRL L ++ VI+FEG+ + + + Sbjct: 78 YLPALAGDDQIVEIWTIQSAGNIFPLSCRLSLTQIEPYGDVIVFEGLYIAENVLTQPNMG 137 Query: 120 ---SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 S Y+R +QGFY + F TN+APMLLIDP R+GQIVDAN AA FYGY+ + MC KHT Sbjct: 138 QLCSKPYRRDEQGFYEQLFNTNTAPMLLIDPLREGQIVDANQAATRFYGYSRDEMCMKHT 197 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 WEIN +GR V+P+M+E++ LPGGHKPLNF+HKLADG+TRHVQTYAGP+E+ G +LMLCI+ Sbjct: 198 WEINTMGRDVLPVMNEVARLPGGHKPLNFIHKLADGNTRHVQTYAGPVELDGVRLMLCII 257 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 HDITEQKRLE+ LEHAA D +T L NRRQF+ + E Q +SL+L+D D FK Sbjct: 258 HDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHAHAQSQRYGHCFSLILLDVDHFK 317 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 IND GH+KGDEVL LARTLES R+ D VFRWGGEEF +LLP T L+ AL LAE+IR Sbjct: 318 SINDQLGHNKGDEVLILLARTLESIIRESDSVFRWGGEEFTILLPLTHLEGALQLAESIR 377 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ + LP+ TVSIGVA H+ E D LFKR+D+ALYRAK GRNRVLAA Sbjct: 378 ETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEALYRAKASGRNRVLAA 431 >UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5XX83_KLEP3 Length = 418 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 204/407 (50%), Positives = 279/407 (68%), Gaps = 7/407 (1%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ D+L++P+W+V PF E ++YAN A++ L D++ ++R G YS + +L Sbjct: 1 MLLKELAVFDVLSTPIWVVHPFTESVVYANPASRTLSGDMSLKEMRNGIYSTCPETQLQH 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YL L +I E+ T+Q + ++ C+ L ++ +++FE ++ A + S Sbjct: 61 YLRYLDTMTEIFEVWTLQTGKGLQSVYCKTTLVDTDDSGTLLLFEAVKLLAQNQSIHTGS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 YQR+ GF+ARFF+TN+APMLLIDPS+DG+IVDAN+AAL FY Y+ E M KHTW+IN Sbjct: 121 RRYQRRNNGFFARFFMTNTAPMLLIDPSKDGRIVDANIAALRFYHYSDEEMRNKHTWQIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 LGR V+PIM+ I+++PGGHKPLNF H LADG+ RHVQTYAGP+ +Y +LMLCI+HDIT Sbjct: 181 TLGRDVIPIMNNIANMPGGHKPLNFTHILADGTLRHVQTYAGPVVLYNIRLMLCIIHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ L+++LE +A HD +TGLLNRR+FY + E IAQ + LLLID D FK IND Sbjct: 241 EEVHLKKELEFSAAHDPLTGLLNRREFYRLVEAPSF----IAQGFCLLLIDIDHFKSIND 296 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 ++GH KGDEVL ++R LE+ + D ++RWGGEEF+L LP +P+ AL LAE IR +V+ Sbjct: 297 IHGHQKGDEVLLVISRILETSVDREDKIYRWGGEEFLLFLPHSPIARALILAEGIRQAVS 356 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + TVSIGVA H E+ID+LF RVD ALY AKN GRNRV Sbjct: 357 EYQ---TLSVTVSIGVAEHHDGEAIDQLFSRVDKALYVAKNGGRNRV 400 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 102/409 (24%), Positives = 178/409 (43%), Gaps = 23/409 (5%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL----SDLQNQHD- 70 ++I P + I N A+ + P + + L + L+ + Sbjct: 293 IYIFYPQTLKFIAVNRGARENLGYTGEELKEMTPVDLKPEFTLQSFKELLEPLLKGEQKQ 352 Query: 71 -IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ-RKKQ 128 I + + ++ + L L + + E + + + R + +++ Sbjct: 353 LIFDAMHRRKDGSLYPVEIHLELVEFDK-------EKVFVALVIDITERREMEKELKERN 405 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + +++ID +G++ N AA GY+ E + K + R+ Sbjct: 406 EILSTIMEYAGDAIIMIDD--NGKVTFWNPAAERILGYSKEEIIGKDLHMFMIQDMRLYE 463 Query: 189 IMHEIS---HLPGGH----KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 E L G K + + +G V+ + I + I+ DI+E Sbjct: 464 AYREAFKKFRLTGKGSVVGKTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRDISE 523 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +KR EE L + D +T + NRR F + E + + +SL++ D D FK++ND Sbjct: 524 RKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDR 583 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 +GH+ GD VL ++A T++ RK D RWGGEEF++LLP T L+ A LAE +R +++ Sbjct: 584 FGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISE 643 Query: 362 VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + G+ + T S GV + +++D + RVD ALY AK GRN V A Sbjct: 644 TELDGIGKVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 E S L + ++ IE + K + +K++ + F + M Sbjct: 118 EKIKSVSAYGYVLKGVDEYVLISQIE----MAFKLYEAKMQLKKREELFRNMFENHDIAM 173 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 +LIDP + G+I+DAN AA NFYGY+ ETM Q + + + L G P Sbjct: 174 ILIDP-QAGRIIDANKAACNFYGYSRETMLQMDIEAVIGVSTTIDGGQKCSEALKKGCNP 232 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 +LA+G + V+ Y+ P++ G LM IV DITEQ + + +LE Sbjct: 233 CICFQRLANGEEKLVEIYSSPVDYQGKTLMHLIVFDITEQWKAKRELE 280 Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 56/134 (41%), Gaps = 3/134 (2%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +++ FY F + + + P + + + N A GY E + + ++ Sbjct: 271 EQWKAKRELEFYKNLFEDSLNEIYIFYP-QTLKFIAVNRGARENLGYTGEELKEMTPVDL 329 Query: 180 NMLG--RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 + ++ + + +H+ DGS V+ + +E +K+ + +V Sbjct: 330 KPEFTLQSFKELLEPLLKGEQKQLIFDAMHRRKDGSLYPVEIHLELVEFDKEKVFVALVI 389 Query: 238 DITEQKRLEEQLEH 251 DITE++ +E++L+ Sbjct: 390 DITERREMEKELKE 403 >UniRef50_Q1Z3E3 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z3E3_PHOPR Length = 622 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 108/395 (27%), Positives = 176/395 (44%), Gaps = 35/395 (8%) Query: 27 IYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI------LTVQRK 80 I+ NSA+ +L + G YS S L DL D ++I +++ Sbjct: 251 IFPNSASNILTSKTFYGP---GVYSYS--------LGDLFGNKDNLKIIFTPKSGVMKKM 299 Query: 81 EEETALSCRLV-LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 + + LS L+ L L + P+ F I P+ L K S + + +K + Sbjct: 300 QNKNVLSASLIALTVLAVSFPLSWFASI-IPSRLQSKLSEAYDKIKKNAAVIDK------ 352 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM--PIMHEISHLP 197 ++++ RDG I N+ GY + + K ++ + +HE+ L Sbjct: 353 -HVMILSTDRDGVIKQVNMCFSETTGYATDEVIGKKQRDLRHRDTSLEAYDEIHELI-LT 410 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHH 255 G +G+ V + P IV +IT++K +E + Sbjct: 411 GKVWEGELKETDKEGNDLWVHKFITPDINANGMIDGFTTIVQNITDKKN----IELLSIT 466 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D++TGL NR + + + D+S+++ D D FK IND YGH GD+VL LA Sbjct: 467 DSLTGLYNRYKLESVLSSESSRCERYQSDFSVIIFDIDFFKKINDTYGHLVGDDVLIHLA 526 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIG 375 + L+ R D+ RWGGEEF+++ T L A AE +R+ + + + + T+S G Sbjct: 527 QLLKENTRITDVASRWGGEEFLIVACNTNLHEAFIFAEKLRIVIENYNFPSIGKMTISCG 586 Query: 376 VAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 VA + E+I EL R D ALY+AK G+N+V+ A Sbjct: 587 VAQYINKETISELVSRADLALYQAKKMGKNKVIKA 621 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 177/337 (52%), Gaps = 12/337 (3%) Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 + + L + ET + EG T ++A R + K+ Y F Sbjct: 644 HKDGSRITVEASAHLVR-DETGRAVAKEGTFRDITQRIEADRLLREREKQ---YRALFEN 699 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 N + MLL+DP R G+IVDAN AA++FYGY +T+ +IN + I E+ Sbjct: 700 NHSIMLLMDP-RTGRIVDANPAAVHFYGYPADTLRSMPFSDIN--AQDETAIFKEMVDSR 756 Query: 198 GGHKP-LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHD 256 + H+LADG R V+ Y+GPI + G++L+ ++HDITE+ RLE +++ A D Sbjct: 757 REKRSYFIHRHRLADGDIRDVEVYSGPIMVQGNQLLYSVIHDITERVRLEREMKRLATTD 816 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 ++TG NR +F+ + E + + ++L++D D FK IND +GH GD VL AL+ Sbjct: 817 SLTGAANRHEFFRLAELELRRAMRYGHSLAVLMLDIDYFKSINDTHGHQTGDAVLKALSA 876 Query: 317 TLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVS 373 + + R D+ R GGEEF +LP T L + +A+ +R + + + FTVS Sbjct: 877 LVRTTLRDTDIFGRLGGEEFAAVLPETDLAGGVLVADRLRRELGALKVRLRDIEVMFTVS 936 Query: 374 IGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLA 409 IG+ +E ID+ R D+A+Y+AK GRNRV + Sbjct: 937 IGLTETRKSERLIDDAINRADEAMYKAKRMGRNRVES 973 Score = 70.6 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 84/254 (33%), Gaps = 18/254 (7%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 NT L V+I++P + +++ AN AA+ + Q + + E +L Q Sbjct: 444 NTFVALGEAVFILTP-DARILDANPAARAMFQMTDEELAGASVELLHASHE--NFLEFEQ 500 Query: 67 NQHDIIEIL-------TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + E T++RK+ + + V R + ++ + + A + Sbjct: 501 RKKAAFEAGVQANFEFTMRRKDGDIFPTEHSVSRITCDDGTLLGTVSVVRDISSRKWAEQ 560 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 R+ + + R F + I +G I N A GY + + + Sbjct: 561 KL---RQSEEKFRRIFE--TIEDGYIVTDMNGVIQMVNPATCAHLGYAESELVGQSMASL 615 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVH 237 + + G + K DGS V+ A + + + Sbjct: 616 YADDNERARFVMALDA-TGAARGHQLTAKHKDGSRITVEASAHLVRDETGRAVAKEGTFR 674 Query: 238 DITEQKRLEEQLEH 251 DIT++ + L Sbjct: 675 DITQRIEADRLLRE 688 Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 6/145 (4%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 L R ++ + + +++ G+I N A GY + Sbjct: 293 LEDITGRMDMERQLAREHERATHYLDIVGSIVVALDTAGRISLINRAGCTTLGYKESELL 352 Query: 173 QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH----KLADGSTRHVQTYAGPIEIYG 228 + ++ + + + + G + H G R + + Sbjct: 353 GQDWIDLIIPDEQRDESRDYLYCMFSGDADTDAEHTNYVTTRSGDHRLITWKNQLLTDES 412 Query: 229 D--KLMLCIVHDITEQKRLEEQLEH 251 +L DITEQ+ E+ L Sbjct: 413 GAPAGVLSSGTDITEQRAAEQALSQ 437 >UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=Chroococcales RepID=B7K4E5_CYAP8 Length = 840 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 105/394 (26%), Positives = 175/394 (44%), Gaps = 35/394 (8%) Query: 22 FEEQLIYANSAAKL----LMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 FE ++ Y N +A++ L QDL+ + G SS ++ ++ ++Q +H E + Sbjct: 198 FEGEITYLNISARVKFPTLQQDLSKHPILEGLIVGSSTQKGTSFVREIQIEHAFFE-QHI 256 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 E++ A+ RL L +T+ ++ EA T G R F+ Sbjct: 257 HYLEDKKAI--RLYLFDITK------YKTREAKLTTGKDR--------------YRLFVE 294 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 + +L+ I++AN A + GY + ++ + + + I E+S + Sbjct: 295 QATEGILLVNCETQYIIEANQAYCHLLGYTTAEIIGLSLHQLIAIDKAI--IDQELSCVT 352 Query: 198 GGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHH 255 +H+ DGS V G ++ ++ DI ++K+ EEQL++ A H Sbjct: 353 SETPYFIKESIHRHKDGSLISVSGKINRTTYQGQEIFCLVIRDIRDRKQAEEQLQYQALH 412 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +T L NR F +++ +D D F +IN+ G S GD +L + Sbjct: 413 DPLTNLPNRESFNQKLVLALDHAQRYQHLMAVMFVDIDSFTNINNTLGPSIGDRLLDSFG 472 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRFTV-- 372 + L SC R GD V RWG +EFVLLLP+ + + LA+ I ++ I R V Sbjct: 473 KRLSSCVRTGDTVARWGSDEFVLLLPQIKNTEDTVKLAQRIFDNLQVPFILDDHRLPVKC 532 Query: 373 SIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 SIG+A + + E+ + L K AL R K GRN Sbjct: 533 SIGIAVYPQDGEAGETLLKNAGTALGRTKEQGRN 566 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 4/303 (1%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 E + + + + ++Q + R L + +++ ++ +I + NL A Sbjct: 361 ENTYLHYVIDVTKYKKMEEEIREQKEFLRLILDSMPAGVMVVDAKTFRIENVNLEAAAMI 420 Query: 165 GYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 G + E + K +EI + + I + + L+ DGS V + Sbjct: 421 GASPEEIIGKSCFEIFPESKGLCLITAVGQEMDWAERILH----RMDGSQLPVLKIVKRL 476 Query: 225 EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 + ++ D+TE+K+LEEQL + D +T NRR F + E + Sbjct: 477 RTKSGEKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMP 536 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 ++L+++D D FK++ND +GH+ GD VL LA +++ R+ D + RWGGEEFV+LLP TP Sbjct: 537 FALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTP 596 Query: 345 LDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 ++ A LAE +R ++ + I G+ R T S GV + +++D L R D LY AK GR Sbjct: 597 VEKAAGLAEELREQLSMLEIPGVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGR 656 Query: 405 NRV 407 N V Sbjct: 657 NCV 659 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 19/187 (10%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 +R +T V+ + T+ A R ++ + + + + +P Sbjct: 94 IRSVTAYGYVMKSATEQVLITIVEMALRLYEANVHANMYW-QILEDSLNEIYIFNP-ETL 151 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLG--RRVMPIMHEISHLPGGHKPLNFVHKL 209 + N A GY E + ++ + ++ + VH+ Sbjct: 152 RFHVVNRGARKNLGYTLEELNTMTPLDLKPEFDLKSFRALLEPLLSGKEEQIVFYTVHRR 211 Query: 210 ADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYH 269 DGS V+ + + G+KL L +V D+TE+K LEE+ NRR+ Sbjct: 212 KDGSLYPVEVHLQLFDYRGEKLCLALVIDLTERKALEEE--------------NRRK-EE 256 Query: 270 ITEPGQM 276 Sbjct: 257 QLRLMLE 263 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 100/350 (28%), Positives = 146/350 (41%), Gaps = 15/350 (4%) Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 L + R + + L +L+ G T Sbjct: 449 RALAGLEQFDVTHRILRPDGTERVVRELASVELSPCGTPARMVGTVQDITEQYHLE---- 504 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 ++Q A F ++ A + +G I N GY E + +N Sbjct: 505 ---QEQRLLAATFESSQA---IFITDVEGTIQRVNATFTQLTGYTEEEAVGANPRILNS- 557 Query: 183 GRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 GR+ E+ GH ++ +G + I ++ + + HD Sbjct: 558 GRQDRDFYQEMFRTVRETGHWQGEIWNRRKNGEIFPLHEVVTAIHDDQGEIEYYIAMFHD 617 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT QK LE LEH A +D +T NR F + + + A SLLL+D D FK I Sbjct: 618 ITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKRI 677 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND +GH GDEVL L L+ R+ D++ RWGGEEFV+LLP T + +AE +R Sbjct: 678 NDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLREQ 737 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 V + + T+S+GVA ESI + KR D+A+Y AK GRNRV+ Sbjct: 738 VTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNRVV 787 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 4/121 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L AP+ L + +G+I+ AN + + E + Sbjct: 13 LFEHAPVGLAEMDTEGRILRANPRLGEMLACDPGDLVGGWLRERLLPEDVEPCEARRRGL 72 Query: 196 LPGGHKPLNFVHKLAD--GSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLEEQLEH 251 L GG +L D G R V+ I I + +L V DI +K+ E++++ Sbjct: 73 LDGGCPNCQVEVRLVDATGLARWVEISISRIPATIDSPEALLAAVADIGTRKQAEQRMDS 132 Query: 252 A 252 Sbjct: 133 L 133 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI---- 179 +++ + + A + + P G + + +++ G+ E + W Sbjct: 123 RKQAEQRMDSLLHASPAVIYTMHPDNLGTMTWLSRNSVSVTGWAPEQISSNPDWLTTHIA 182 Query: 180 -NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 GR V + +S G LN+ ++ +G + ++ I + ++ Sbjct: 183 PEDYGRCVCQVRRWLSDGAQGFCRLNYRQRMPNGHWQWLEDQITAIRDATGAVTELVGAF 242 Query: 237 HDITEQKRLEEQLEHAAH 254 DI + E LE A Sbjct: 243 QDIGARVETERHLEKIAR 260 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 144/325 (44%), Gaps = 16/325 (4%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 + V G T K S+ +Q K L NS + DG Sbjct: 343 RVEYDMLGNVKRITGTAQDITQRYKTSKELEFQSK---------LLNSVTESIFVHDLDG 393 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE------ISHLPGGHKP-LN 204 + N A+ GY M E++ + ++E L K L Sbjct: 394 NFIYLNEASYITRGYTKSEMLGMKVQELDYSDEKNSAEIYEENLANLQEQLSKKEKAVLE 453 Query: 205 FVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNR 264 H+ DG ++ I+ ++ I DI+E K + + LE A+ D +TG+ NR Sbjct: 454 VSHRTKDGKILPIEITCKLIKEKDKSYIISIARDISELKAMNKTLEKMANTDNLTGIYNR 513 Query: 265 RQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 R+F I + + + SL++ID D FK IND YGH +GD V+ + R Sbjct: 514 RKFEEIIKIEMERSARYNSNLSLIMIDIDHFKRINDTYGHDEGDNVIRKTVEIVSKNIRH 573 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNES 384 D+ RWGGEEF++L P+T A LAE +RV++ V+ L + T S GV + +E Sbjct: 574 LDVFVRWGGEEFIVLCPQTESKNASILAEKLRVAIESVNYETLGKITCSFGVTSYIKDED 633 Query: 385 IDELFKRVDDALYRAKNDGRNRVLA 409 KR+D ALY AK++GRNRV+A Sbjct: 634 KSSFIKRLDTALYSAKDEGRNRVVA 658 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 99/349 (28%), Positives = 163/349 (46%), Gaps = 18/349 (5%) Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFE--------GIEAPATLGLKASRSANYQR 125 + T+ R+ E + + R + FE I A + + ++ Sbjct: 634 VGTLLRRGEFRNIEVEMRRRD----GSTVWFEYSGKLDGDTIIGVAQDVTQRRAAEAARQ 689 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + Y F + + L DP +G+ +D N A GY + E++ Sbjct: 690 RSEAHYRLLFEAAADAIFLHDP--EGKFLDVNEVACRRLGYTRRELLAMTPRELDAEEFA 747 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL 245 G H+ +G+ V+ +A ++ G ++L I DIT++KRL Sbjct: 748 EQVGERIRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVVLSIARDITDRKRL 807 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E+ L A D +TG+ NRRQF+ E + + + ++L++D DRFK +ND +GH Sbjct: 808 EQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHH 867 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD VL + + R+ D++ R GGEEF +L T LD AL+ AE +R +V ++ + Sbjct: 868 AGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVP 927 Query: 366 GLP---RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLAA 410 R TVSIG+A + ++D++ +R D ALY AK GRNRV+ A Sbjct: 928 FSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLA 976 Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 18/166 (10%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + + F T S ++L+D R G +V N A GY + M +H Sbjct: 442 RSEELFRGIFSTASVGIVLLD--RFGLLVRVNDACARMLGYATDEMRGQHFSRFMHDDET 499 Query: 186 VMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 + S L H+L DGS A P+E ++ L I+ DI E Sbjct: 500 TLAATTLTSLLDRTQSTSRLQHRLRGKDGSYLWTDISASPLEGPNGEVEAALAIIVDINE 559 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQ--FYHITEPGQMQHLAIAQDY 285 Q+ + A D+ RR + + G + + Sbjct: 560 QRTAQ-----QAQEDS-----ERRYRALFENAQVGIFRTRISDGRF 595 Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 6/164 (3%) Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 R + + P E A + + Q + Y F Sbjct: 521 HRLRGKDGSYLWTDISASPLEGPNGEVEAALAIIVDINEQRTAQQAQEDSERRYRALFEN 580 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVMPIMHEISHL 196 + S DG+ ++AN + YG+ + +K + M Sbjct: 581 AQVGIFRTRIS-DGRFMEANSRIIEMYGWPDRAEFMEKMRSTEWYVDSEARGRMVGTLLR 639 Query: 197 PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 G + + + DGST + ++ GD ++ + D+T Sbjct: 640 RGEFRNIEVEMRRRDGSTVWFEYSG---KLDGDT-IIGVAQDVT 679 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 102/356 (28%), Positives = 156/356 (43%), Gaps = 16/356 (4%) Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 LQ+ +E+ + R L V + + G + T A + Sbjct: 702 LQSPFSKVELRCLTRDGRAIWLQSSGVP-HFDDEGGFRGYRGADMDITDRKDAENAIKAS 760 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 +K L SA ++ G N AA +GY E + + E+ Sbjct: 761 ERKLRA-----LAESAYDAIVMIDMHGNASFWNRAAERLFGYTEEEVMGRPIHELITPPE 815 Query: 185 RVMPIMHEISHLPGGHK------PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 M + G DG+ V+ ++ G + + D Sbjct: 816 LRDEAMAGMRQFAGSGDGDAVGAIQETEALRKDGTRVSVERSVSSFQLGGRWYAVATIRD 875 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ITE+K E +L A D++TGL NRR+F + E M+ ++L++D D FK + Sbjct: 876 ITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRV 935 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND +GH GDEVL LAR + R+ D++ R GGEEF +LLP T A+ +A+ +R + Sbjct: 936 NDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRA 995 Query: 359 VAKVSI---SGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRVLAA 410 + K S+ +G R TVSIG A + E+++ L KR D ALY AK GRN+V+A Sbjct: 996 IEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVVAG 1051 Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 47/143 (32%), Gaps = 6/143 (4%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + ++ R ++ ++ SA ++ ++ N AA GY + + + Sbjct: 369 YRVRQAEVEARLRESEERTLAISQSAQDGIVMIDDQDRVTYWNPAAERLLGYTAQEIMGR 428 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHK------PLNFVHKLADGSTRHVQTYAGPIEIYG 228 + + + ++ + + D S V+ +++ G Sbjct: 429 RLHPLLVPEPQQDKAESGLAGFAASGRGAVVGQVIELEAVRKDSSIVPVELAVSSVKLKG 488 Query: 229 DKLMLCIVHDITEQKRLEEQLEH 251 + + D+T +KR E L Sbjct: 489 RWYAVGTLRDMTRRKRYEAALRR 511 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 78/231 (33%), Gaps = 4/231 (1%) Query: 23 EEQLIYANSAAKLLMQDLTFSQLRTGPYSV-SSQKELPKYLSDLQNQHDIIEILTVQRKE 81 ++++ Y N AA+ L+ + + + + + K S L V + Sbjct: 404 QDRVTYWNPAAERLLGYTAQEIMGRRLHPLLVPEPQQDKAESGLAGFAASGRGAVVGQVI 463 Query: 82 EETALSCRLVLRKLTETEPVIIFEG-IEAPATLGLKASRSANYQRKKQGFYARFFLTNSA 140 E A+ + + + +G A TL R ++ L N+ Sbjct: 464 ELEAVRKDSSIVPVELAVSSVKLKGRWYAVGTLRDMTRRKRYEAALRRSEQTSRTLLNAP 523 Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH 200 L + +G+I N Y E M + ++ + +R + +S + Sbjct: 524 EDLAMLIEPNGRIAAINETGARIYERTPEDMIGRSLFDF-LSDKRREALRTILSQVMEQA 582 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 P+ F + DG H Y + M D+TEQ++ + L+ Sbjct: 583 GPVRFEGEH-DGRRFHASAYPVTGPDGAVEQMAVFARDVTEQRKAQAALKR 632 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 43/152 (28%), Gaps = 16/152 (10%) Query: 118 SRSANYQRKKQGFYARF---FLTNSAPMLLIDPSRDGQ--IVDANLAALNFYGYNHETMC 172 +R QRK Q R F SA + DG+ + GY E M Sbjct: 617 ARDVTEQRKAQAALKRSEQRFRDVSAAVGEYIWETDGRDTFTFVTEDVFSILGYTQEEML 676 Query: 173 QKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--G 228 + + ++ L + DG +Q+ P G Sbjct: 677 GQTPALFVAREHTEDFLRWRADLYRLQSPFSKVELRCLTRDGRAIWLQSSGVPHFDDEGG 736 Query: 229 DKLMLCIVHDITEQKRL-------EEQLEHAA 253 + DIT++K E +L A Sbjct: 737 FRGYRGADMDITDRKDAENAIKASERKLRALA 768 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 7/294 (2%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + ++ + + P+L+ DP +G I N A GY+ + ++ Sbjct: 133 DERARDEQLRLLSTAVEVSGDPVLITDP--EGTITYVNAAFEELMGYSRSEVLGENPRRF 190 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 GR+ + G F+++ DGS H++ P+ K+ + + Sbjct: 191 KS-GRQDDAFYQGMWRALERGESFRGEFLNRRRDGSLIHLEQTITPVLDDHGKISHYVAL 249 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 D+T++ R+E+++ AH D +TG+ NR + E + + SL++ D D F Sbjct: 250 GKDVTDRLRMEDEIRRVAHTDWLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHF 309 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND YGH GDEVL ALA+T+ + R D + RWGGEEF++++P T L A +LAE + Sbjct: 310 KAVNDQYGHEAGDEVLKALAQTVSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKL 369 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 R +V+ +S+ G+P T S GVA +S L +R D+A+Y+AK GR+RV+A Sbjct: 370 RQAVSTMSVPGVPGVTASFGVAELASGDSAKLLARRADEAMYQAKQAGRDRVVA 423 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 7/120 (5%) Query: 142 MLLIDPSRDG--QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP-G 198 +L+ D D +IV N GY + + + + + + + L G Sbjct: 27 VLITDADLDDGPRIVYVNAGFEQMTGYAADEVLGETPRLLQGPRTSRVILDRLRAALSAG 86 Query: 199 GHKPLNFVHKLADGSTRHVQTYAGPIEIYG----DKLMLCIVHDITEQKRLEEQLEHAAH 254 ++ DGST V++Y P+ + + D+T+++ +EQL + Sbjct: 87 ETFDGEVINYRKDGSTYVVRSYISPVYAEEAPERVTHYVSLQQDVTDERARDEQLRLLST 146 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 6/305 (1%) Query: 110 PATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 T L R ++R+ + S+ ++ +G IV N GY Sbjct: 113 RITAWLSIQRDVTHERELEQEARLLSTAVESSAASILITDTEGCIVYVNRGFEQITGYRR 172 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEI 226 + + + +N G + ++ G F+++ G+ +++ P+ Sbjct: 173 DEVLGETPAVLNS-GEQSARFYRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITPVRA 231 Query: 227 YGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 +++ + DITE+ R+EE+L+ AA DA+TGL NR F + E + Sbjct: 232 DQGQVVRYVATGKDITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGA 291 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 SLL+ D D FK +ND +GH GD VL ALA + + R D V RWGGEEF++LLP TP Sbjct: 292 LSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETP 351 Query: 345 LDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 L A LAE +R VA T S GV +++ L +R D+ALYRAK+ GR Sbjct: 352 LAAAGELAEKLRERVAAHRFPHGAPVTASFGVCALRDDDTCRTLVRRADEALYRAKHLGR 411 Query: 405 NRVLA 409 +RV Sbjct: 412 DRVEC 416 >UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVB7_9AQUI Length = 525 Score = 316 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 18/398 (4%) Query: 15 PVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 PV VSP L + SA + L +++ +L ++LP+ ++ E Sbjct: 142 PVKFVSPNVVNL-FGYSAEEFLTGKVSYPELVH-------PEDLPRVAEEV---KRYSEQ 190 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 E+ + R K V IF G + T + +++ + + Sbjct: 191 GVSSWTHEDYRILTRDGKVKWVLDHTVPIF-GRDRDITHYYGYLIDITEKHEQEELFRKL 249 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 +N ++L + ++ I+ AN A GY+ E + I + + ++ I Sbjct: 250 AESNPNGVILFNF-KNNSIIYANRAVSEITGYSEEELESLKDPLILIHPKDKHIVIKNIQ 308 Query: 195 H-LPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + G KP ++ + G T+ V+ + I G++ L + DIT++K E +L Sbjct: 309 RRIKGERKPFSYSVRFLTKGGKTKWVKIVSSVITYRGEESTLVTLIDITKEKARERKLHT 368 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A HD +TG+ NRR E +S++LID D FK++ND +GH GD VL Sbjct: 369 LATHDQLTGVYNRRALLMFFEKYLHSARRYGIPFSVILIDLDNFKYVNDQFGHQTGDRVL 428 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFT 371 A+ ++ R+ D+ RWGGEEF+ LLP +AE +R V + S + R T Sbjct: 429 KTFAKLVKGSLRRTDVFGRWGGEEFLALLPFNDKP--YMVAEKLRRKVEETEFSRVGRVT 486 Query: 372 VSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 S G + + ID + R D+ALY AK G+N + Sbjct: 487 ASFGATTYREGDDIDSMMARADEALYEAKRKGKNTTVV 524 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 10/306 (3%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 AT + A + A + + + ++S L+ G + N AA +GY + Sbjct: 463 ATSDISAQKKALQDLQDREDMLQSI-SDSVQDALVLMDEKGLVHFWNPAAEKIFGYRADE 521 Query: 171 MCQKHT-----WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIE 225 M + E N+L + + I L + + G + P+ Sbjct: 522 MLGESLQCCFHAEDNLLPENLGNTDNYIDGLLSSYGSFTVNVRRKGGDVFPAEVLLSPLR 581 Query: 226 IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY 285 ++ D+TE+K E++L A D++TGL NRR F E + +D Sbjct: 582 KDDQWWVVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDL 641 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL 345 SLL++D D FK +ND+YGH GD+VL L++T R D+ R GGEEF +LLP T L Sbjct: 642 SLLMMDIDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGL 701 Query: 346 DTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKN 401 D A +AE +R + + SG TVSIGVA + + ++++L K D LY AK Sbjct: 702 DGATLVAERLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKE 761 Query: 402 DGRNRV 407 GRN+V Sbjct: 762 AGRNQV 767 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 65/211 (30%), Gaps = 11/211 (5%) Query: 47 TGPYSVSSQKELPKYLSDLQNQHDIIEIL-TVQRKEEETALSCRLVLRKLTETEPVIIFE 105 G Y+ S + L+ E + R E+ + R + + VI+ Sbjct: 272 DGLYTFDSLSS-NSFHYVLRQDVVFSEGWKVISRVPNESLVVPRRNIMFILLAFLVIMLG 330 Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFL--TNSAPMLLIDPSRDGQIVDANLAALNF 163 + + AS + + F+ ++A + + DG V A + Sbjct: 331 YLFWRQSAVTVASEEIRLALEDSE---KIFMDVADAAGEFIWETGPDGSFVFVTGRAEDV 387 Query: 164 YGYNHETMCQKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 GY+ E + + ++ V + + L F DG ++ Sbjct: 388 LGYSAEELIGRSPFDFVDEEYSWDVRKEFLDAAQFGNSFNGLVFRFVNRDGRKIWLEFNG 447 Query: 222 GPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 P+ DI+ QK+ + L+ Sbjct: 448 VPVFDAEGVVTGFRGATSDISAQKKALQDLQ 478 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 104/381 (27%), Positives = 166/381 (43%), Gaps = 39/381 (10%) Query: 33 AKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVL 92 ++ DL+ GP + K L L L Q ++ ++ E Sbjct: 52 TRICQGDLSHPIHEQGPLAGCR-KSLQARLRHLTWQVQMVAAGDFSQRGESLG------- 103 Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 E A + +R+ ++ + Y L +++ +G+ Sbjct: 104 ------------EFSTAFNEMTEALARARAELQRSEARYR--LLAEHVADVIVTLDGEGR 149 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADG 212 + + +A GY + + + +I P + + DG Sbjct: 150 FLYVSPSAQALLGYAPDELAGRPLCDITPSAEAPRP-----------GTVVELTVRCRDG 198 Query: 213 STRH--VQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 +TR V T A P +++C+ DI+ +KRLE L+H A D +TG NRR F + Sbjct: 199 TTRWAEVNTAALPPGAGDGAVLVCVFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEV 258 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 + A+ SLLL+D D FK +ND +GH+ GDEVL + T R D+V R Sbjct: 259 CGQELQRADRRARPTSLLLMDIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGR 318 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHEGN-ESID 386 GG+EF +LLP T L+ A +AE +R + ++++ G FTVS GVA + + +++ Sbjct: 319 IGGDEFAVLLPATTLEQAGRVAEQLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVE 378 Query: 387 ELFKRVDDALYRAKNDGRNRV 407 EL +R D ALY AKN GRN V Sbjct: 379 ELLQRADRALYAAKNAGRNCV 399 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 101/356 (28%), Positives = 161/356 (45%), Gaps = 31/356 (8%) Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 HDI E+ T + EE S + + +L + E +F +GL + S N Q Sbjct: 120 HDISELETTR---EEIGKSSKGIPFELEQQEEKKLF--------MGLSQAISRNL---SQ 165 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 ++ F N M + +D N + LN G++ + + E+ +L Sbjct: 166 EIFSHAFCLNPTLMSITAFDES-IYLDVNESFLNTLGFSRDEVIGHSCSELGILSISQKK 224 Query: 189 IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQ 248 + E+ G + G I++ KL+L + HDITE+ R++E+ Sbjct: 225 EIQEMLLKKGKIRNWESKFIAKAGEEVPGLLSVDLIQLRDKKLLLMVFHDITERIRMKEE 284 Query: 249 LEH--------------AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 LE A D++TGL N RQ + + Q+ +++++D D Sbjct: 285 LEEKNQQLRELNRILQVQAITDSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLDIDH 344 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK IND +GH GD VL +A+ ++ R D+ R+GGEEF+++LP+T L+ + E Sbjct: 345 FKSINDEFGHQVGDVVLVEVAQIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQVGER 404 Query: 355 IRVSVAKVSISG-LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 IR V TVSIG++ H+G E +D +R D LYRAK GRNR+ Sbjct: 405 IRRQVEIEGFEDSKEGITVSIGISQHQGEEMVDY-IERADQLLYRAKRKGRNRIEC 459 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 9/281 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP------- 188 + + +P ++ DG I AN A +GY E M + G R Sbjct: 23 MGDISPYAVLLVDGDGAIRQANAKAGTLFGYGAEEMVGLSIETLVPEGDRQRHGELRETY 82 Query: 189 IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQ 248 + G + L +H+ G V+ P+++ G ++++ D++ +K LE Q Sbjct: 83 LAAPRERPMGAGRELQALHR--SGEVIPVEIALVPVDVAGTRMVMVSAIDLSVRKALEAQ 140 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 L H A+HD +TGL+NR F + + ++L+++D D FK +ND YGH +GD Sbjct: 141 LHHQANHDPLTGLVNRYHFEELLAREIERGQRYGGGFALIMLDIDHFKAVNDTYGHLEGD 200 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP 368 +VL A L R D + RWGGEEF+LLLP T + A +LAE IRV+V + Sbjct: 201 KVLRRFAEELTGKIRAADTLARWGGEEFMLLLPGTDIAGARALAEAIRVAVNGCRMPVPG 260 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + TVS+GV + ES+ L KRVD+ALY AK GR++V+ Sbjct: 261 QVTVSLGVTGYRNGESVWGLLKRVDEALYAAKLAGRDQVVV 301 >UniRef50_A8V293 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V293_9AQUI Length = 393 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 15/354 (4%) Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L+N+ DI + + ++ + + +F+G K + Sbjct: 48 YLKNKVDIFKDYFYIKNGDKKVFYKESLPFYVNG-----VFKGRVCLLRDVSKEKKYERK 102 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML- 182 K + Y L S +++ +G+I N L F+ + + + K +E + Sbjct: 103 LLKARQEYED--LVESVNAIVLKWEANGKIKFINRYGLEFFKFKKDEIIGKSVFETIVPH 160 Query: 183 ----GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 G+ + ++ EIS P + + G+ + P+ L+ L I Sbjct: 161 TDKNGKDLYKMIQEISINPEKYIYNENENVDKYGNRYWIVWRNKPVYDDDGNLIEILSIG 220 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 D T+QK+L+++L+ A D +TG+ NRR+F + + + + SLLLID D FK Sbjct: 221 SDYTQQKKLKDRLKQLAETDELTGIYNRRKFMELLKKETEKSKRYNNNISLLLIDIDDFK 280 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 IND YGH GD VL ++ + R+ D+ RWGGEEFV+ L T L A L E I Sbjct: 281 KINDTYGHEIGDFVLTLFSKLVSKNIRETDIFARWGGEEFVI-LTFTDLRNAKILGEKIC 339 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 V+ L + TVSIG+A ++ +E I+ R D +Y+AK G+N+V A Sbjct: 340 NVVSNFKFDDLDKITVSIGIASYKKDEDINSFISRADKLMYKAKQSGKNKVATA 393 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 174/410 (42%), Gaps = 17/410 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL- 65 N +L + VW + +Y+ ++ L+ + S +E + + Sbjct: 674 NVTELTSDWVWQIDQ-NGIYVYSGGKSRDLLGYEPEEVYGNTLFDFMSPEEG-ARVGAIF 731 Query: 66 ------QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 Q +E + + + L V + IF+G + + Sbjct: 732 KKLTCEQKPFSFMENTILHKDGHQVILETSGVPLFSDDG----IFQGFFGTEHDITERKQ 787 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + + + + + L+D + + + N A GY + + + +I Sbjct: 788 AKEALEESEYKFRTILDVAADGVCLVD-KQTRKFIQGNNAICKMLGYRDDELYELGIEDI 846 Query: 180 NMLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 + + + + + G + N K +GS + I + G +M+ H Sbjct: 847 H-PAEALAEVFLQFNKKRQGEIIVVPNIPVKRKNGSIFLADISSAAIILDGRTIMVGFFH 905 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 D+TE+K++EE+++ A D++TG+ NRR F + SL++ D D FK Sbjct: 906 DVTERKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKK 965 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH GD+VL AL+ ++ R D+V RWGGEEF+LL+P + + A + E +R Sbjct: 966 VNDNFGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATAAIEKLRR 1025 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 ++ + TVS G+ NE KRVDDALY+AK GRNRV Sbjct: 1026 EISDFPFGQVGSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNRV 1075 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 7/178 (3%) Query: 79 RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN 138 R + + C +V + E + I+ + K+Q Sbjct: 492 RLKHKNGTICWMVEYGMPVYEDRNVLLYIDGLIFDITDRKVAEEDSHKQQELTNLIIE-- 549 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 + PM + ++ + + N GY E + K+ +++ + + + + Sbjct: 550 AIPMRVFWKDQNLRFLGCNTLFAKDAGYIKPEELIGKNDFDMAWKDQADLYHSDDRQVVD 609 Query: 198 GGHKPLNFVH--KLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 G L+F DG ++T P+ + +L I ITE K+LE +L Sbjct: 610 SGTPKLSFDEPQTTPDGRQIWLRTSKVPLHNDAHQSIGILGIYEMITEYKQLELKLRE 667 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 71/199 (35%), Gaps = 21/199 (10%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 L+ LQ + I Q E+E A L E++ + E +E LG + Sbjct: 228 NAMLAQLQIFDNAF-IQNSQHLEDEVAQGTEQFL----ESDTQLEKELVEHK--LGKQKL 280 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG--QIVDANLAALNFYGYNHETMC-QKH 175 ++ N Q L NS P+ + +G ++ + L+F Y + Q Sbjct: 281 KNVNEQLSA--------LLNSLPIAVYRSRAEGDFAMIYMSPNVLSFTDYEPKDFIEQSD 332 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGD--KLM 232 W + + E+ L + + ADG+ +Q I + Sbjct: 333 LWLTRLHPDDAEKMTSEMELLFEKEAHVYEYRWMRADGTYIWIQDSLRIIPEEDGIPLHL 392 Query: 233 LCIVHDITEQKRLEEQLEH 251 + DIT +K++EEQL Sbjct: 393 AGMWQDITTRKKVEEQLRK 411 >UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZG2_SULD5 Length = 768 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 162/366 (44%), Gaps = 28/366 (7%) Query: 56 KELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP----- 110 ++ +L + ++ + ++ E + + + E P++ + AP Sbjct: 408 EDGSSFLPE-----ELPFMKVLRSGESQNGIIMGIQR----EGYPLVWMQMNAAPLYLHD 458 Query: 111 ----ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 + + L S NY+R K ++ +++ G I + + A GY Sbjct: 459 NDNVSAVVLTLSDITNYRRSKYKL-EKYLSMIDKHVIISTTDLKGVITEVSEAFCKISGY 517 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 + E + I + E+ G ++ DGS V+T P Sbjct: 518 SKEELIG-ANHSIVRHADVPSSVYEEMWKAIKSGLIWRGELKNRHKDGSAYWVETIIAPR 576 Query: 225 EIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 L+ I DIT++KR+EE + D +TGL NR + + Sbjct: 577 YDEDYSLIGYTAIRTDITDKKRVEE----LSITDRLTGLYNRLKLDELFAHHLSIARRHH 632 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 +S++L+D D+FK +ND YGH GD +L A +++ R D+ RWGGEEF+LLLP Sbjct: 633 TPFSIILLDIDKFKSVNDTYGHQVGDTILQEFALCVKAQIRSEDIFGRWGGEEFLLLLPN 692 Query: 343 TPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKND 402 +PL+ A LAE +R+ VA S S + T S GVA + + RVD+ALYRAK + Sbjct: 693 SPLENASLLAEKLRLCVASFSFSQVGMKTASFGVATFHEGDDEKSMMVRVDEALYRAKEN 752 Query: 403 GRNRVL 408 GRN+V+ Sbjct: 753 GRNQVV 758 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 104/396 (26%), Positives = 176/396 (44%), Gaps = 24/396 (6%) Query: 26 LIYANSAAKLLMQDLTF------SQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQR 79 ++Y N A + ++ GP + +++ + + ++ E TV Sbjct: 70 IVYVNPAFCAMTGYAAEALIGLSPRILQGP---DTDRQVIERMRQCLSESLFFEGSTVNY 126 Query: 80 KEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN 138 + + + + + + V F ++ + ++A R +Q A+ Sbjct: 127 RADGSPYVVEWKISPVRDDAGAVCNFVSVQQNISPRIRAER-------EQHLLAQALNAA 179 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG 198 P+++ D + IV AN A + GY+ + ++ ++ G+ + + Sbjct: 180 LDPIMITD--CNATIVFANEAFQHITGYSASEIIGENPRVLSS-GKHDEMFYAQFNEALA 236 Query: 199 GHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAH 254 P F++K DGS + + P+ + + I D+T + E++L AH Sbjct: 237 SGTPFRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAH 296 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D +TGL NRR H E + +SL++ D D FK +ND YGH GD VL ++ Sbjct: 297 SDPLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSV 356 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 A L+ R D+ RWGGEEF++L+P + LD A LA+ IR V + I T+S+ Sbjct: 357 AVILKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTGSVTISL 416 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 GVA E+ L +R D ALY+AK GRNRV A Sbjct: 417 GVAQLSPGETAASLIQRADKALYQAKRRGRNRVDIA 452 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 42/148 (28%), Gaps = 6/148 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ---IVDANLAALNF 163 A + ++ + +L+ D + IV N A Sbjct: 21 RAAINSTDHSTGHQMTSSSQRLALLEAVVEQSFNAVLITDANLTNGGPFIVYVNPAFCAM 80 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG-HKPLNFVHKLADGSTRHVQTYAG 222 GY E + + I L + V+ ADGS V+ Sbjct: 81 TGYAAEALIGLSPRILQGPDTDRQVIERMRQCLSESLFFEGSTVNYRADGSPYVVEWKIS 140 Query: 223 PIEIYGDKL--MLCIVHDITEQKRLEEQ 248 P+ + + + +I+ + R E + Sbjct: 141 PVRDDAGAVCNFVSVQQNISPRIRAERE 168 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 143/296 (48%), Gaps = 11/296 (3%) Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R+ + Y F ++A L+ DG ++D N G + E + ++ I Sbjct: 519 QEALRRSEERYRALF--DNAADGLLLYEADGTLIDVNETIARRLGESREAIVGRNVASIV 576 Query: 181 MLG--RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 RV P + EI L GH VH+ A G +V+ +A IE G ++L D Sbjct: 577 EPEVLERVRPRLTEI--LETGHASFESVHRTAMG-PVNVEVHARRIEFEGRFVVLSSARD 633 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ITE+K LE L A D +TG+ NRRQF+ + L ++L++D D FK++ Sbjct: 634 ITERKNLEAALLREATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNV 693 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 NDLYGH GDEVL A A R D+ R GGEEF LLP + A+ AE +R Sbjct: 694 NDLYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKR 753 Query: 359 VAKVSI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLAA 410 V + S+ + TVS+GV + D++ +R D ALY AK+ GRNR A Sbjct: 754 VERRSVVYEGTALQCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNRSEMA 809 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 4/128 (3%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + + F N+A + ++ R G +V +N+A G + E M + Sbjct: 278 RSEALFRGLF--NNAAVGIVLLDRQGFVVRSNVACARMLGTSPEQMHGLSFRAVLPPEDA 335 Query: 186 VMPIMHEISHLPGGHKPLN--FVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 + S G L+ + +GS V + + G+++++ + D+TEQ Sbjct: 336 DQHLEEMQSLAEGETDELHGCWEMLHRNGSRLRVDLHGARLPGSGEEVVMLVGVDVTEQW 395 Query: 244 RLEEQLEH 251 R E L Sbjct: 396 RTERALAE 403 Score = 57.5 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 6/134 (4%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTW 177 R+ + + Y F N+ + DG ++ANL +GY + T ++ Sbjct: 396 RTERALAESERRYRALF-DNAQAGIFRTSLADGTFLEANLRMAQMFGYDDVATFMAEYRA 454 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 N + +M + G + + DG+T + GD ++ + + Sbjct: 455 AENYVDPADRALMLDRLRTSGSFATMETHMRRRDGTTTWFLYSGT---LDGDT-IIGVAN 510 Query: 238 DITEQKRLEEQLEH 251 +I+E + +E L Sbjct: 511 EISEMRATQEALRR 524 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 9/294 (3%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + +++ Q + ++ G+I A+ A + GY + K+ I Sbjct: 307 DISERKQSQLKIEEYMRIIDKNVISSTTDLHGKITKASTAFCDISGYRKNELLGKN-HNI 365 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCI 235 + E+ G ++ +GS+ V P++ D+++ I Sbjct: 366 VRHKEIPQTLYKELWETIKAGNVWQGEIKNRHKNGSSYWVDVSISPVKNEKDEIISYTAI 425 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 HDIT++KR+EE + D +T L NR + I ++S+++ID D F Sbjct: 426 RHDITDKKRIEE----LSITDRLTQLYNRLKLDEIFAMKLATAGRYNTNFSVIIIDIDYF 481 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND +GH GD+VL A +++ AR+ D+V RWGGEEF++L T LD A+ L+E + Sbjct: 482 KLVNDTWGHQAGDDVLREFAEIIKNNARETDIVGRWGGEEFLILSSDTDLDGAIKLSEKL 541 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 R V+ + S T S GV+ + + + KR D+ALYRAK +GRNRV A Sbjct: 542 REMVSLFNFSFAGYKTASFGVSSYHPGDDEKTMVKRADEALYRAKENGRNRVEA 595 Score = 41.0 bits (95), Expect = 0.088, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 9/142 (6%) Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM-CQKH 175 AS++ + F A L D + + + G+ + + Sbjct: 181 ASKATKKLHTSEERLR--FALEGAGDGLWDWNLKTNEIFFSKRWKEMLGFKEDELDSNLD 238 Query: 176 TWEINMLGRRVMPIMHEIS-HLPGGHKPLNFVHK--LADGSTRHVQTY--AGPIEIYGDK 230 W + + + +I+ H+ G H+ D S + + +I G Sbjct: 239 EWNKIVHPEDLEQVNADIAAHIEGKSDVYKNEHRVKCKDNSYKWILDRGLIVSRDIDGSP 298 Query: 231 LMLCIVH-DITEQKRLEEQLEH 251 + + H DI+E+K+ + ++E Sbjct: 299 IRMVGSHSDISERKQSQLKIEE 320 >UniRef50_A8FUM2 Putative uncharacterized protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FUM2_SHESH Length = 634 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 107/406 (26%), Positives = 175/406 (43%), Gaps = 28/406 (6%) Query: 17 WIVSPFEEQ--LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY---LSDLQNQHDI 71 +I+ P EQ Y + + + Q F + V + + +S++ HD Sbjct: 239 FILHPLPEQGWSRYLPNRSNVFTQ---FPEFGNSVLEVKDTHKGDHFTFQISEILKNHDE 295 Query: 72 IEILTVQRK------EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 ++ V RK ++ L+ L + V+ PA L K + + + Sbjct: 296 AFVMAVPRKSLLAKFKKNNMLTAGLTALTVLLVSLVLSGLVAIIPARLQRKLTDAYFKIK 355 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 R+ +T+S R G I+ + A YG++ E M K + Sbjct: 356 NYAEIINRYVITSS-------TDRAGHILSTSAACSEVYGFSAEEMKGKRHNIVKHPDTP 408 Query: 186 VMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + L G K +G++ + P K+ + HDIT++ Sbjct: 409 AETHEDIWRTILQGKTWHGEIKDKAKNGNSFWLNHVITPDFDDNGKIVGFTSVSHDITDR 468 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K ++E + D +TGL NRR+ + + + +S++L+D D FK +ND + Sbjct: 469 K----EIERLSVTDTLTGLNNRRRLDELFINEFDRFNRYERQFSMILLDVDHFKQVNDKF 524 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GD+VL + L S RK DL+ RWGGEEF+L+ P T +D A+ LAE IR + Sbjct: 525 GHKVGDKVLIEMGEILASSVRKNDLLGRWGGEEFLLICPETSIDGAIDLAEKIRKIIEDT 584 Query: 363 SISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + T S GV ++S +++F R D+ALY AK DGRN V+ Sbjct: 585 DFPEIGSVTASFGVTVSIKDDSDEDMFIRADNALYTAKRDGRNCVV 630 >UniRef50_C1SNU0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNU0_9BACT Length = 622 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 99/409 (24%), Positives = 180/409 (44%), Gaps = 33/409 (8%) Query: 23 EEQLIYANSAA----KLLMQDLTFSQLRTGPY-------SVSSQKELPKYLSDLQNQHDI 71 E ++I A+ A+ K L D+ + + G + S+ L+ + + + Sbjct: 226 EGEIISASDASLAWSKYLKSDIKINNIFPGAFNNDMNQSSLQKSNLFVYSLNQIFDNGEG 285 Query: 72 IEILT------VQRKEEETALSCRLV-LRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 ++++ + + ++ +S ++V L L + P+ AP+ L ++ + Sbjct: 286 VKLIMKPKASMLHQIKKNNLISAQIVALVILLISFPLSWVAS-YAPSKLQSSLLKAFDKI 344 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 R RF + + + G + GYNH + I Sbjct: 345 R-------RFNFIIDSNIATTEIDLKGNFTAVSAKYAEMTGYNHTELIGNTHSLIRHPDT 397 Query: 185 RVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGP-IEIYGD-KLMLCIVHDITE 241 + + L F + DG + A P I+ G+ ++H+ITE Sbjct: 398 TQKQLDDLWKTILKKEIWQGEFKNINKDGELFWTKQTATPAIDDKGNVTGYTAVIHNITE 457 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K++EE + D +TGL NR + + + ++++ + ++D D FK +ND Sbjct: 458 KKKIEE----LSITDRLTGLYNRHKLDAVLKAERIRNERHNTRFCAAILDADHFKRVNDT 513 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 YGH GD+VL LA ++ R+ D RWGGEEF+++ T + LA+ +R +V + Sbjct: 514 YGHQVGDDVLVKLAAIIKENTRESDFCGRWGGEEFLVVALETDITNTAFLADKLRKAVEE 573 Query: 362 VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + + TVSIGVA + E+I R D+ALY+AK GRNRV++A Sbjct: 574 TDFTPVEKVTVSIGVAEYSRGETIAHFINRADEALYKAKQTGRNRVVSA 622 >UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BII0_9PROT Length = 662 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 6/307 (1%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 + GL R+ + ++ ++G I N A + G Sbjct: 355 KYEDSYAGLGTIMDITDIRETEDKLKVLAQAIEQTDEMVRITDKNGVITFVNDALVAHTG 414 Query: 166 YNHETMCQKHT--WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP 223 Y + K ++ M EI L G F+++ D + + + P Sbjct: 415 YKPLELIGKKINMFKSGKHDNAFYKEMWEII-LSGKTYRGVFINRKKDKNIFYEEETITP 473 Query: 224 IEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 I + + DITE+ +E +L+ A D++TG+ NR + E + Sbjct: 474 IFDSKKNIQNFVATSQDITERIEMENKLQKLATIDSLTGIYNRHKTNEEIEIQLAKAKRY 533 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 ++++L++ D D FK +ND YGH GD++L + + R+ D RWGGEEF+LLLP Sbjct: 534 DEEFALVMFDIDHFKDVNDTYGHDAGDDILKEFSDVVLKHIRESDRFGRWGGEEFMLLLP 593 Query: 342 RTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKN 401 + D A+ +A+ IR V++ + L R TVS+G + + N++ + L KR D+ALY+AK+ Sbjct: 594 KVDKDEAIRVADKIREFVSRYPFNKLSRITVSVGASIYRENDTKESLLKRTDEALYQAKS 653 Query: 402 DGRNRVL 408 GRNRV+ Sbjct: 654 SGRNRVI 660 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 23/264 (8%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL-- 65 LD S ++I Y N A + + P + + + +L + Sbjct: 139 ILDNSNSELFIFDTDTLHFTYLNKKALKHIGYSFEEMQKMTPVDIKPEYTMSNFLRLIKR 198 Query: 66 ----QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 + H + E + + E + RL L L + ++F + +S Sbjct: 199 LENGETGHFVFETVHQCKNGELYNVEIRLELMTLENKKQFVVFAHDI------TERKKSL 252 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ + + + T+ + + + + N A ++ GY + + W + Sbjct: 253 IQLQESEEKFRKIAETSLMGIFIYKE----RFIYVNEAFVDMSGYTINELYEIDPWSVVD 308 Query: 182 LGRRVMPIMHEISHLPGGHKPL---NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +R L G P +F DG R ++ I+ L + D Sbjct: 309 KSQRETVRAIANRRLKGEEFPRVYSDFKVNRKDGECRIMRVMTQTIKYEDSYAGLGTIMD 368 Query: 239 ITEQKRLEEQLEHAA----HHDAM 258 IT+ + E++L+ A D M Sbjct: 369 ITDIRETEDKLKVLAQAIEQTDEM 392 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 15/181 (8%) Query: 91 VLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRD 150 +RKL+ + ++ ++ + +L + +R N + +++ + + D Sbjct: 100 SIRKLSNGDLIVFYKDLNEYKSLEDETNRKTNELKS----LGHILDNSNSELFIFDTD-T 154 Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLG--RRVMPIMHEISHLPGGHKPLNFVHK 208 N AL GY+ E M + +I + ++ + + GH VH+ Sbjct: 155 LHFTYLNKKALKHIGYSFEEMQKMTPVDIKPEYTMSNFLRLIKRLENGETGHFVFETVHQ 214 Query: 209 LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK-------RLEEQLEHAAHHDAMTGL 261 +G +V+ + + K + HDITE+K EE+ A ++ G+ Sbjct: 215 CKNGELYNVEIRLELMTLENKKQFVVFAHDITERKKSLIQLQESEEKFRKIAET-SLMGI 273 Query: 262 L 262 Sbjct: 274 F 274 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 114/376 (30%), Positives = 169/376 (44%), Gaps = 19/376 (5%) Query: 50 YSVSSQKELPKYLSDLQNQHDIIEILT--------VQRKEEETALSCRLVLRKLTETEPV 101 Y S ++ L L D++ D+ + T R + + T Sbjct: 826 YGYSREEFLGMTLRDIRPSEDVKILETYIANINPSFNRSGYWQHRKSNGEIIDVEITSHG 885 Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAA 160 I F G +A L + Q+K Q RF AP+ ++ + DG+I+ N A Sbjct: 886 IEFAGRQARLVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAW 945 Query: 161 LNFYGYNHETMCQKHTWEINMLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHV 217 GY HE + W G R V ++ E+ + G + F + G TR Sbjct: 946 TELTGYTHEDIPTIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIW 1005 Query: 218 QTYAGPIEI--YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + P+ +L++ + DITE+K+ EEQL HAA HD +TGL NR E Sbjct: 1006 NFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAI 1065 Query: 276 MQHLAIAQD-YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + + ++LL ID DRFK +ND GH GD++L A+A L++C R D V R+GG+ Sbjct: 1066 KRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGD 1125 Query: 335 EFVLLLPR-TPLDTALSLAETIRVSV-AKVSISGLP-RFTVSIGVAHHEG-NESIDELFK 390 EFV+LL T A +A+ I + + + G +VSIG+ ES EL + Sbjct: 1126 EFVILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESASELLR 1185 Query: 391 RVDDALYRAKNDGRNR 406 D A+YRAK GR R Sbjct: 1186 NADIAMYRAKEKGRAR 1201 Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 1/137 (0%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 R+ + Y F N P+ + D + ++ N AA+ YGY+ E Sbjct: 778 TVRKHIEEALRESEQKYRLLFYANPNPLWVYDV-KTLAFLEVNQAAIEHYGYSREEFLGM 836 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 +I + + + P ++ + H+ ++G V+ + IE G + L Sbjct: 837 TLRDIRPSEDVKILETYIANINPSFNRSGYWQHRKSNGEIIDVEITSHGIEFAGRQARLV 896 Query: 235 IVHDITEQKRLEEQLEH 251 +V+DITEQ + +++L+ Sbjct: 897 LVNDITEQLKAQQKLQE 913 Score = 64.1 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 53/156 (33%), Gaps = 7/156 (4%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 +++ G + + +K + Y + L+ DG + N A Sbjct: 103 IVVTVGRQLYLGQLNILKKIKQALKKSRSRYRAIVEEQTE--LICRFRPDGTLTFVNEAY 160 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQ 218 ++ E + +K + + ++ + L + + H+ ++ G R Q Sbjct: 161 YRYFEKTPEYLLEKIFLPLIPFPDQQ-QVLDNLKSLNQQKRVITHEHRVIISSGEMRWHQ 219 Query: 219 TYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHA 252 I K++ + DITE K++E L Sbjct: 220 WTNRAIVDRQGKIIEFQAVGRDITELKQIETALREL 255 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 11/187 (5%) Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 + ++ +E + +S R E + G T S+ + Sbjct: 613 KTEYLTLEYKIQSSSGDWVWMSARGKSVANDEEGNPLKIVGTHRDIT----ESKEIEEEL 668 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 K+QG + + P++L + + N G++ E + + Sbjct: 669 KQQGELLQTI-VDYIPVMLAYIDPNYNFLWVNEEFERILGWSLEEIKNLNILAQLYPDPD 727 Query: 186 VMPIMHEISHLPGGHKPLN-FVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 + ++++ + F +L +G+T + T +++ ++ I DIT +K Sbjct: 728 ER--QYVMNYIQSAEEKWEDFKTRLRNGTT--IDTSWANVKLSNG-AIIGIGQDITVRKH 782 Query: 245 LEEQLEH 251 +EE L Sbjct: 783 IEEALRE 789 Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 11/159 (6%) Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + ++ EG+ T K + +Q F +++P+ +I+ D ++ + Sbjct: 386 ADQEMMIEGVAIDITETKKTQMAL-----QQAHQCLTFHVDNSPLGVIEWDNDYRVKRWS 440 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIM-HEISHLPGGHKPLNFV---HKLADGS 213 A +G+ E + K E + + ++ ++S + +FV + G Sbjct: 441 SQAEKIFGWKEEEVVGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGE 500 Query: 214 TRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + Y ++ +L +V D++EQKR E L+ Sbjct: 501 IIDCKWYNSVQYDQSGEILSILSLVLDVSEQKRAEAALQ 539 Score = 47.5 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 85/237 (35%), Gaps = 10/237 (4%) Query: 21 PF-EEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQR 79 PF ++Q + N + + + + R S + + + Q IIE V R Sbjct: 181 PFPDQQQVLDNLKSLNQQKRVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGR 240 Query: 80 KEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN 138 E LR+L E E + ++ A + + + + + Y R Sbjct: 241 DITE-LKQIETALRELNEELEQRVEQRTLQLEAQIQERQAVEKALM-ESEAKYERLVERL 298 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG 198 A + P++ + + + GY+ + + IN + +P + E+ Sbjct: 299 PAVIYQFSPTKGK--LYCSSYVKSILGYSTDEI-DLPWLWINSIHPEDLPKVKEMIQEFV 355 Query: 199 GHKPLNFVHKLAD--GSTRHVQTYAGPIEIYGDKLML-CIVHDITEQKRLEEQLEHA 252 K +++ D G + + + ++M+ + DITE K+ + L+ A Sbjct: 356 QGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIEGVAIDITETKKTQMALQQA 412 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 8/151 (5%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 L + + A + + L S + + G+I + + GY Sbjct: 522 LSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEI-YCDQSWWQKLGYEP 580 Query: 169 ETMCQKHTWEINMLGRRVMPIMHE--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI 226 + + W + + +PI +L G + L +K+ S V A + Sbjct: 581 DHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARGKSV 640 Query: 227 YGDKL-----MLCIVHDITEQKRLEEQLEHA 252 D+ ++ DITE K +EE+L+ Sbjct: 641 ANDEEGNPLKIVGTHRDITESKEIEEELKQQ 671 >UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVE0_DESAS Length = 738 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 156/297 (52%), Gaps = 8/297 (2%) Query: 119 RSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R+ ++K + R+ L+ + +++ DGQI+DANLAAL YGYN E + + Sbjct: 176 RNITERKKTEAILRRYQLLSENTRDIILFVRSDGQIIDANLAALQAYGYNSEDILTLNIQ 235 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 I R + I +++ +H+ DGST V+ + + G+++++ I+ Sbjct: 236 NIREKATRTL-INYQLREAVDKGIVFETIHQRKDGSTFPVEVSSKGALLEGEQIVVSIIR 294 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DI+E+K+ E Q++H A HD +T + NR + + +LLL+D D FK Sbjct: 295 DISERKKFELQIKHLATHDYLTNIPNRYYLEESLKRYVAKAKR-GTTSALLLLDLDNFKL 353 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR- 356 +ND GH GDE+L + L++ R+ DL+ R GG+EF +LL ++ A +AE +R Sbjct: 354 VNDTKGHVAGDELLIIFTKILKANLREEDLLTRLGGDEFAVLLEGISINEATEIAEKLRA 413 Query: 357 ----VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 ++A I+ TVSIG++ +G+ ++ + D ALY AK GRNRV+ Sbjct: 414 VIDNQTIALSLINVRFNLTVSIGLSMVDGSMDPIQILSQADRALYIAKESGRNRVIT 470 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 +LT A ++ + ++ N A+ YGY+HE + + N+ + E+ Sbjct: 74 YLTKYANDIVFLLDSNFNFIEINDKAIKTYGYSHEEFFKMKFY--NLCDQEKYSEDDEVY 131 Query: 195 HLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 H +HK DGST V+ + I G K I+ +ITE+K+ E L Sbjct: 132 TKIDSHDGYIYETIHKKKDGSTFPVEISSRTIIAGGKKHYHSIIRNITERKKTEAILRR 190 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 103/405 (25%), Positives = 182/405 (44%), Gaps = 20/405 (4%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL----QNQHDI 71 ++I P + + N A+ + P + + +L + L + + Sbjct: 149 LYIFHPKSLKFVAVNRVARKNLGYTIEELNTMTPLDLKPEFDLESFQKLLNPLVSGEQEQ 208 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ-RKKQGF 130 + TV R+++ T L ++ E + + + L R+ + R+K Sbjct: 209 VLFNTVHRRKDGT-----LYPVEINLQLFDYGGEKLCLASVVDLTERRAMEEENRRKDEM 263 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG-----YNHETMCQ---KHTWEINML 182 +P L+ S++ +I+ N AA + +G Y E + L Sbjct: 264 LRLMLEGIPSPAWLV--SKEHRILAQNKAAASLFGTKVGDYCWERVLGGEYLSDEYREAL 321 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 + P++ + G + L+ + + G+ + L D+T Sbjct: 322 EKNGSPLLGTKCYFCRGDEALDKNAPINSEVEFAGGIWDTWWIPLGEDIYLHYATDVTRY 381 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K++EE+L + D++T + NRR F E + +SL+++D DRFK IND + Sbjct: 382 KKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSINDRF 441 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH+ GD VL ++A +++ RK D + RWGGEEFV+LLP T ++ A+ L E +R S++++ Sbjct: 442 GHNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRESLSQM 501 Query: 363 SISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 I G+ R T S GV + ++ID L +RVD +Y AK GRN V Sbjct: 502 DIPGVGRVTASFGVVGYCPGDTIDTLMQRVDALMYEAKAAGRNCV 546 Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 63/196 (32%), Gaps = 26/196 (13%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 E + L T+ + +E L + + R F NS Sbjct: 98 EKIKEVKAYGFVLKNTDKAALLSTVEMAVKL--------HEANAHARMFERLFE-NSLNE 148 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG--RRVMPIMHEISHLPGGH 200 L I + + V N A GY E + ++ +++ + Sbjct: 149 LYIFHPKSLKFVAVNRVARKNLGYTIEELNTMTPLDLKPEFDLESFQKLLNPLVSGEQEQ 208 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 N VH+ DG+ V+ + G+KL L V D+TE++ +EE+ Sbjct: 209 VLFNTVHRRKDGTLYPVEINLQLFDYGGEKLCLASVVDLTERRAMEEE------------ 256 Query: 261 LLNRRQFYHITEPGQM 276 NRR+ + Sbjct: 257 --NRRK-DEMLRLMLE 269 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 134/303 (44%), Gaps = 9/303 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + ++ + +P L++ G+I N G+ E + Sbjct: 139 RVRWTSAMVEAKSHIEMELRKLTSAVEHSPNLVLITDIAGRIEYVNRKFTAVTGWQPEEV 198 Query: 172 CQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 K T + G ++ L GG F ++ DGS + P+ Sbjct: 199 IGKTTS-LFKSGLTPPSTYQDLWRTILDGGEWHGEFCNRRKDGSLYWEKCSIAPVRSPTG 257 Query: 230 KL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 L + + D+TE KRL+E+L A D++TG+ NRR F ++ ++ Sbjct: 258 LLTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAV 317 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 L++D D FK IND YGH+ GD L ALA T S R+ DL R GGEEF +L P L+ Sbjct: 318 LMLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNA 377 Query: 348 ALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDG 403 A AE +R+++A I+ T S+G++ + E SID R D ALY AK G Sbjct: 378 ATEAAERLRLAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAG 437 Query: 404 RNR 406 RNR Sbjct: 438 RNR 440 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 172/409 (42%), Gaps = 28/409 (6%) Query: 28 YANSAAKLLMQDLTFSQLRTGPYSVSSQKELP--------KYLSDLQNQHDIIEILTVQR 79 Y + + D Q G + S+ L L ++H++ + Sbjct: 262 YPDVWNAISTGDSGALQTDAGLFVYSTVYPLQPGQRSSTGSPLPRSPSKHELSAREYYWK 321 Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA-------SRSANYQRKKQGFYA 132 T + ++ E I++ G A + A + +++ Sbjct: 322 IVSFTPYATFTEAAEINEVGRDILYGVAYLLLAFGSLAIAFFSLSRKQARVRMEEEEARL 381 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW-EINMLGRRVMPIMH 191 R + LL+ +G+I AN A GY+ + K +++ G H Sbjct: 382 REIAVTMSDGLLVA-DLEGKITFANPEACRLLGYSENELLGKDMHGTLHVHGDGKQKEKH 440 Query: 192 EISHLP-----GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK-LMLCIVHDITEQKRL 245 E S L ++ + + + +G + I ++ HDITE+K+ Sbjct: 441 ECSMLRVARTGETYRAVEEIFRCKNGQLLPISVSVSAIIREQQAAGIVVAFHDITERKKF 500 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E++LE A DA+T L NRR FY + E ++ + +L+++D D FK IND YGH Sbjct: 501 EQELERRAQIDALTSLNNRRHFYELAEQEILRTKRYGKPLALMMLDVDHFKDINDTYGHH 560 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GD VL L R+ D++ R GGEEF +LLP A AE +R++VA +++ Sbjct: 561 VGDTVLQTLGAVCLQTMREIDIIGRLGGEEFAILLPEATAAQAFDAAERLRLAVAAIAMP 620 Query: 366 ----GLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLA 409 FT+SIGV + I ++ KR D+A+Y+AK GRNRV + Sbjct: 621 LEQGQTLSFTISIGVTGLVAKDSDIADMLKRADEAMYQAKRSGRNRVCS 669 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 98/286 (34%), Positives = 141/286 (49%), Gaps = 11/286 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L N A +I G I NL A +G + E+M + I R + Sbjct: 25 LANVAADAIITIDEHGTIQSFNLCAERMFGRSAESMIGQKLHPIIPERYRRLHDDGVSRV 84 Query: 196 LPGGHKPL-----NFVHKLADGSTRHVQTYAGPIEIYGDKL-MLCIVHDITEQKRLEEQL 249 G P F DGS ++ +L + I+ DITE+KRLE +L Sbjct: 85 SRSGETPFDGETREFHALRKDGSEFPIELTVASWFGEDRRLSFIGIIRDITERKRLEAEL 144 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 A D +TG+LNRR+F +T + + +L+++D D FK IND +GH+ GD Sbjct: 145 RQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHTVGDR 204 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS---- 365 V+ +LA S R+ D++ R GGEEF ++LP +L +AE +R V + I+ Sbjct: 205 VIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKVEGLQITLNDG 264 Query: 366 GLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRVLAA 410 + RFT S+GVA + ++S D L R D+ALYRAK DGRN V AA Sbjct: 265 RIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGRNCVRAA 310 >UniRef50_Q30U30 Diguanylate cyclase (GGDEF domain) n=2 Tax=Campylobacterales RepID=Q30U30_SULDN Length = 539 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 14/319 (4%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 +IF+ + L + R + T+S+ ++L D D +I+ AN L Sbjct: 223 LIFKQLRYNQQLQTEVKRRTKEIESTKHLLQEIIDTDSSFIVLTD---DKEIIYANETIL 279 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPI----------MHEISHLPGGHKPLNF-VHKLA 210 NF GY+ +K+ I + ++ +H I +L N V Sbjct: 280 NFTGYHSIEEFKKNNEYIFDVFEKIEDNSNFMQTCNDGIHWIEYLIKEQNSKNLKVCIKK 339 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 DG R+ + YA I+ L L +IT + ++LEH A DA+T L NR + + Sbjct: 340 DGKYRYFKPYAKEIKTDDKVLYLITFDEITNEYVKIKELEHMASTDALTKLFNRTKLNDV 399 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 E + S++ +D D FK +ND YGH GD VL +A + S R GD+ R Sbjct: 400 LEKEMALSRTVPSPLSVIFLDIDYFKAVNDTYGHDAGDRVLINIANIITSSIRAGDIAAR 459 Query: 331 WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFK 390 WGGEEF+++L TP+ A L E +R V + + T+S+GV + ES + K Sbjct: 460 WGGEEFMIILQATPVSEASVLGEKLRARVEGHLFETVGKITISLGVTEYINAESEESFIK 519 Query: 391 RVDDALYRAKNDGRNRVLA 409 RVD+ALY AK GRN+++ Sbjct: 520 RVDEALYEAKERGRNKIII 538 >UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGH7_9PROT Length = 428 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 91/338 (26%), Positives = 147/338 (43%), Gaps = 9/338 (2%) Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 + + + + E + ++ I L + N + Sbjct: 94 VTRTALKLMQQQVTISPYIVNENKVMVSIYNISELHETKLSLQKEINKVNELNKILENDR 153 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 ++++ S +G I+D + F+GY + K+ + G+ I E+ + Sbjct: 154 DIIDKNIMVMKTSVNGNIIDVSTLFCEFFGYEKNELIGKNPSVLKS-GKLPDLIYKELWN 212 Query: 196 LPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEEQLEH 251 +K + + G +R VQ+ PI LM + DIT +K LE Sbjct: 213 TITNNKSWTGEVENVTSSGESRWVQSRITPILDDDGVLMEFNAVYQDITNKKL----LEV 268 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 D +T + NR F + + ++ +L+ D D FK IND YGH GDE L Sbjct: 269 LYVTDPLTQIYNRTYFDELMTSIALHQRKADTNFIILITDIDHFKSINDTYGHQVGDEAL 328 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFT 371 +AR ++ R+ D+V RWGGEEFV++L T LD A +AE +R ++ K I + T Sbjct: 329 KDVARVIKDSLRENDVVARWGGEEFVIMLKNTELDEAQMIAEKLRANIEKTKIQNVIDIT 388 Query: 372 VSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 SIG+ + E + FKR D+ALY+AK GRN V+ Sbjct: 389 TSIGLTKYYVGEDTNLTFKRADNALYKAKESGRNMVVT 426 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 142/369 (38%), Gaps = 19/369 (5%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 S +Q+ + E + E + V I Sbjct: 344 DDRASTMQDMDTLRERGVITNVENRYQCRDGTWRWISWNSAFVPEQGLIYGVGRDVTALR 403 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSR---DGQIVDANLAALNFYGYNHETMCQK- 174 R R + + P +++ D Q + + G E + Q Sbjct: 404 RMVEELRTSEARLRAM--AATVPGVVLQWREVPGDRQFTYVSPRSREILGVPPEWLLQDW 461 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIE--------- 225 ++ R V + + G L G R + A P+ Sbjct: 462 RALPVHPADRTVWELSLRDAMERRGDWMFEGRLVLPGGEVRWWRGEARPVHGGQSGAAEL 521 Query: 226 -IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 + I+ D TE + +E+L A D +TGL NRR+F E +H Sbjct: 522 PEESGIVYCGIITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTP 581 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 +L+ ID DRFK +ND +GH+ GDEVL ALA + R D V R GGEEF +LLP T Sbjct: 582 LALISIDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTA 641 Query: 345 LDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKN 401 + A+++AE +R V + +G T+S+GV+ + D L + D ALYRAK Sbjct: 642 PEEAMAVAERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKA 701 Query: 402 DGRNRVLAA 410 GRNRV A Sbjct: 702 GGRNRVERA 710 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 2/126 (1%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 Y + F +SA MLL+D + G I++ N AA FYGY +C +I LG Sbjct: 47 LYEQLFRYHSAVMLLVD-AETGCIIEGNPAASTFYGYPDGALCGMSINDIANLG-PEEQA 104 Query: 190 MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 G H+LA G R V+ ++ P+ ++ L+ I+HDIT++ R EE L Sbjct: 105 RRLAELREGRLTCFTSRHRLASGEVRDVEVHSVPVRLFERTLLYTIIHDITDRVRAEEAL 164 Query: 250 EHAAHH 255 + H Sbjct: 165 RRSEQH 170 Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 6/176 (3%) Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 T + + E R + ET V+ +G P + A + +++ R Sbjct: 240 TPRYEAEYRVQGADGAWRWIQETGQVVERDGDGLPLRV---AGIVCDVSVRRRAEEDRRR 296 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EIS 194 L N +P L+ DG + N A G++ E + + + R + + Sbjct: 297 LFNLSPDLMCVGGVDGYFRELNPAWQEVLGWSREELLDRPWAALVHPDDRASTMQDMDTL 356 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 G + ++ DG+ R + + + G L+ + D+T +R+ E+L Sbjct: 357 RERGVITNVENRYQCRDGTWRWISWNSAFVPEQG--LIYGVGRDVTALRRMVEELR 410 >UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1Q2M0_9BACT Length = 1069 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 10/335 (2%) Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 KE + L + E I FE ++ L L+ R +R + + Sbjct: 481 KEGDKILYIFEFFSRKEEKPQAIFFEVVD---NLALQLGRLIERKRADERIRKLSQVVEQ 537 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LP 197 +P ++ ++G I N GY + + + + G+ + + + Sbjct: 538 SPASILITDKEGIIEYVNPKLAELTGYTGDEIIGRTPRMLKS-GKTSNETYRNLWNTIIS 596 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHH 255 G ++K G + PI + + L I DITE K+ E QL + A Sbjct: 597 GKEWQGELLNKKKTGELYWEHVHISPIRNHKGHVTNYLAIKEDITEHKKFETQLLNMATR 656 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +T L NRR+F + Q L +LL +D D FK++ND GH GDE+L LA Sbjct: 657 DPLTNLFNRRRFQEELQYWIAQTLRYGATGALLFLDLDNFKYVNDTLGHQAGDELLIRLA 716 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIG 375 L S R D+ R+GG+EF +LLP T + A +A I + + + T SIG Sbjct: 717 EMLRSRLRDTDIFARFGGDEFAILLPYTDREKAGLIANEILELTREHTFEHS-KVTFSIG 775 Query: 376 VAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + E + L D A+YRAK GRNR Sbjct: 776 IVIFPEHGRDAETLLVNADLAMYRAKESGRNRFCV 810 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 44/117 (37%), Gaps = 3/117 (2%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ L + ++ + +G + N AA +GY+ E M K+ + Sbjct: 220 EENELKFANLASVINDGIVVLNENGHVTHWNPAAEKIFGYSEEEMKGKNILNVIGGAEHT 279 Query: 187 MPIMHEISHLPGG---HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 P M +++ G ++ + + S ++ ++I ++ I DI+ Sbjct: 280 EPEMRFFNNIKAGCIINETIEITGVKKNKSEFPLEASFSTLQIGRQIHIIAIFRDIS 336 >UniRef50_Q0ACB8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACB8_ALHEH Length = 437 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 155/344 (45%), Gaps = 21/344 (6%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 E ++ + ++L L E I + + + Q + Sbjct: 100 FEWQHLKADGS--PIWVEVLLTGLDRDERSKILVVWRDISRRKALEAEARAAQASLEAII 157 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW-------EINMLGR 184 +P+ L+ + +I+ N A L GY E + + T + G Sbjct: 158 EH------SPVGLLFLDGERRILHCNPAFLRMTGYRAEEVLGRTTAFLYTSHTDYEATGE 211 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQK 243 V P++ + G + ADG V P++ + + ++ DI+E+K Sbjct: 212 AVYPVLRQ-----GRTSEIEREFVRADGEVITVSLLGRPLDPCDLSQGFVWVLQDISERK 266 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 L++ LE A D +TG LNRR+ + S+ L+D D FK +ND YG Sbjct: 267 ALQDALEREATFDQLTGALNRRRIEQALAREMERSNRHGDALSVALLDVDHFKRVNDQYG 326 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H+ GD VL L R + R DL+ RWGGEEF+++LP T +AL LAE +R +A+ + Sbjct: 327 HNVGDRVLQTLIRRCKENLRAVDLIGRWGGEEFLIVLPDTDRHSALQLAERLRARIAERA 386 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + TVS+G+A E +D+L KR DDALYRAK+ GRNRV Sbjct: 387 RADTHGVTVSLGLASFRPGEGLDQLVKRADDALYRAKDRGRNRV 430 Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 30/172 (17%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINML--- 182 + Y R F N ML+I+ + V N AA GY + + + EI+ + Sbjct: 20 ESRLYQRVFEQNPDGMLIIEGH---RFVVCNRAAAELLGYEDVGQLLGRTPEEISPVCQP 76 Query: 183 -GRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 G E+ G + + H ADGS V+ ++ +L + DI Sbjct: 77 DGHSSAKRSREVVAQARARGSQRFEWQHLKADGSPIWVEVLLTGLDRDERSKILVVWRDI 136 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + +K LE + ++ + LL +D Sbjct: 137 SRRKALEAE--------------------ARAAQASLEAIIEHSPVGLLFLD 168 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 98/323 (30%), Positives = 141/323 (43%), Gaps = 15/323 (4%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVD 155 V GI T A ++ + + + S + + G+ + Sbjct: 293 DSEGVVQRMIGIVQDITERKLAVQAVIA---SERRFRNLVESLS--DWVWEVDEQGRYIY 347 Query: 156 ANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGS 213 + + GY + K E+ RV I K L ++ DG Sbjct: 348 CSPNVRDLLGYEPAELIGKSPLELMPAAEAARVAEIFGTALSERSHLKDLVNINLHKDGH 407 Query: 214 TRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 ++T P+ + I DIT++K LE +LE A D +TGL NRR F+ + Sbjct: 408 EVVMETSGAPVVDADGTFRGYRGIDRDITDRKELERELESQARTDVLTGLNNRRYFFELA 467 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 E + +SLL++D D FK ND YGH GD VL L+ R+ DL R Sbjct: 468 ELELARAKRHGNQFSLLMLDVDHFKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRI 527 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI-----SGLPRFTVSIGVAHH-EGNESI 385 GGEEF ++LP T D A+ +AE +R+++A + S FTVSIGV + Sbjct: 528 GGEEFAIMLPETRGDRAMEVAERLRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQV 587 Query: 386 DELFKRVDDALYRAKNDGRNRVL 408 D+L KR DDALY AKN GRN+V Sbjct: 588 DDLLKRADDALYAAKNAGRNQVC 610 Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 1/141 (0%) Query: 108 EAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN 167 A L+AS +A Q +++ R L NS+ + + + +D N GY+ Sbjct: 50 AAEHRDALEASENARRQAEQELKLLRTLLDNSSDAIEVIDPVSFRFLDVNETECRELGYS 109 Query: 168 HETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 E + H ++I+ V E + VH+ DGST V+ A ++ Sbjct: 110 REELLSLHIFDIDPEFSEVAAKHIEEELNQVSGVRFDSVHRRKDGSTFPVEVSAKQVKTD 169 Query: 228 GDKLMLCIVHDITEQKRLEEQ 248 + CI DI+ +K LE + Sbjct: 170 -RPYLFCIARDISVRKLLESE 189 Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 13/93 (13%) Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHL------PGGHKPLNFVHKLADGST 214 + +GY + W + V+P E+S L + DG Sbjct: 226 HIFGYTSQE----SEWSFKLFLEHVLPEDRSEVSRLFHEAIARQTDWHCECRIRRTDGEL 281 Query: 215 RHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL 245 R + + M+ IV DITE+K Sbjct: 282 RWITVRGRHWHDSEGVVQRMIGIVQDITERKLA 314 >UniRef50_Q6ALC0 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALC0_DESPS Length = 652 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 41/376 (10%) Query: 44 QLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVII 103 L ++ +L +S LQN EI T+ R+E + R++TE + + Sbjct: 309 LLTNHVLQITKSGDLSARISLLQND----EIGTLAREENRMLMQLESQRREITEAKDTL- 363 Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 I + +G+ A R K A F NS + +R+ + + N Sbjct: 364 -NAIIENSQVGVMALRGEQIMYKGNQRLADIFAYNSPESMEGRSAREFHLSEEN------ 416 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP 223 + +K+ ++ + G + + + DGS+ Sbjct: 417 ----YIEFREKYFKKL----------------VDGNQIQVEYKLRRKDGSSVWCTLSGKA 456 Query: 224 IE----IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 I+ +K ++ + DIT +++ E+L+ A D++TGL NR Q + I E + Sbjct: 457 IDSSTPPDLEKGVVWTIDDITTKRQSREKLQRLATTDSLTGLCNRSQLFEIAEAELERQR 516 Query: 280 AIA-QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVL 338 + + SL+++D D FK IND +GH+ GD VL A A R D+ R GGEEF++ Sbjct: 517 HSSEHNLSLVMLDIDYFKKINDAHGHAAGDLVLKAFADIGRKYLRDVDVFARIGGEEFII 576 Query: 339 LLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEG-NESIDELFKRVDD 394 LLP T + AL +AE R V K + FTVS GV G ++ +E+ D Sbjct: 577 LLPGTDIKVALKIAERFRALVEKNPVMVNEKEIAFTVSFGVTAWNGIEQTFEEVLHEADS 636 Query: 395 ALYRAKNDGRNRVLAA 410 ALY AK GRNRV Sbjct: 637 ALYVAKEKGRNRVEMG 652 >UniRef50_D1SVG0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SVG0_9BURK Length = 326 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 18/319 (5%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 A T S S + Y+ ++ ++I RDG+ V N AA G Sbjct: 10 HRMAELTDDRTTSASLLELNARLALYS----IDAIADMIIWTDRDGRYVTVNRAAQQLLG 65 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIE 225 Y E +++ L H G L V+ DG++ ++ A + Sbjct: 66 YTPEEFRGLRVCDVDPLFSEERWRSHWADLERLGSVTLETVNTRKDGTSVPIEVTASLVV 125 Query: 226 IYGDKLMLCIVHDITEQKR-------LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 G +V DITE++R L E++ + D++TG+ NRR+F + +H Sbjct: 126 FDGSLFNCSVVRDITERRRNEAERQALNERIYQLSITDSLTGIANRRRFDEMLGSEFARH 185 Query: 279 LAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR-KGDLVFRWGGEEFV 337 + ++LID D FK ND YGH GD L +A +++ R DL R+GGEEF Sbjct: 186 ARSGEPLCVVLIDIDHFKAFNDHYGHPGGDSCLQRVAAAIDTRMRWPCDLAARYGGEEFA 245 Query: 338 LLLPRTPLDTALSLAETIRVSVAKVSISGL----PRFTVSIGVAH--HEGNESIDELFKR 391 +LP T LD A + E +R ++ ++I R T S+G A H ++ D L + Sbjct: 246 CILPATGLDEASDMTEGLRRAIEALAIPHAAAASGRVTASVGAACCLHAAQQTPDGLLEA 305 Query: 392 VDDALYRAKNDGRNRVLAA 410 D +LYRAK +GRNR A Sbjct: 306 ADASLYRAKREGRNRTAVA 324 >UniRef50_B6BJC6 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC6_9PROT Length = 396 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 107/409 (26%), Positives = 184/409 (44%), Gaps = 25/409 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 F L+ L P+ I + + I+ N L +D T +++ Q + K +S + Sbjct: 7 FIQLNKLVYPI-IFTDNSDTFIWGNKKFYSLHKDAFL----TNDITLTDQIIIDKVVSAV 61 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLT---ETEPVIIFEGIEAPATLGLKASRSAN 122 + + I T E A++ +++ ++ + ++ F I L K S Sbjct: 62 NSVNKEYTIST-----NEKAITYQIIKSQIEIKSKKYNLLSFFNISKRIALATKLSE--- 113 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 KQ + L+ + P ++ +++ I N A G+N++ + K+ +I Sbjct: 114 ----KQILFET--LSENLPEGIVVHNKE-LIEYTNPAFEKLCGFNNKELMGKNIVDIFAK 166 Query: 183 GRR--VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + ++ ++ + V+ +E L IV DI+ Sbjct: 167 NEKLYILDFYKKLESKKIKRTTVETKILTKKNKEIWVKIKTKILEKEDKFYFLTIVTDIS 226 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 ++K E+L A+ D +TG+ NRR+F I + ++ + S L D D FK++ND Sbjct: 227 KEKSNHEKLSKLAYFDNLTGIYNRRKFDEILKIETIRVHRYKRKLSALFFDIDHFKNVND 286 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH GDEVL ++ ++ R D RWGGEEF+LLLP T + A +AE IR ++ Sbjct: 287 TYGHDTGDEVLKKMSNIIQLHTRDTDYFARWGGEEFILLLPETNVLEANLMAEKIRKTIF 346 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + T+SIGV+ + E KR+D ALY+AKNDGRNR + Sbjct: 347 SYDFNKVGNLTISIGVSELKEKERSSTFLKRLDKALYKAKNDGRNRTIV 395 >UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX2_RHORT Length = 632 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 150/319 (47%), Gaps = 11/319 (3%) Query: 100 PVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 V + + A A+L K + + + F + +++ID + G I + N + Sbjct: 306 RVSLLDLERANASLESKVAERTRQLAEGEERMRGFIMAARDAVVIID--QKGIISEFNPS 363 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL----NFVHKLADGSTR 215 A +GY+ E + + + H P G + + + + +GS Sbjct: 364 ATELFGYDVEEVRGQSVNMLMPATYARDHDGHLRKGKPSGQRAIGRGREMIGRRKNGSEF 423 Query: 216 HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 ++ G G ++ + ++ DITE+K EE L A+ D +TG+LNRR F +E Sbjct: 424 PIELTVGTQSFDGTRVHIGVIRDITERKATEETLRRLANIDGLTGVLNRRSFTEESELLL 483 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 + S++++D D FK +ND YGH GD VL AL + RK DL+ R GGEE Sbjct: 484 SLANRHGRRLSMMIVDADHFKGVNDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEE 543 Query: 336 FVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGVAHHEGN-ESIDELFK 390 F +LLP T + A LA + +++ + + G+ + TVS+GV+ + D + K Sbjct: 544 FAILLPETDQEGAEGLAWRVVLAIRALEVPLPEGGVLKVTVSVGVSCRNTEAATFDWMLK 603 Query: 391 RVDDALYRAKNDGRNRVLA 409 D ALY AK+ GR+RV Sbjct: 604 EADTALYAAKHGGRDRVAC 622 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 4/267 (1%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL 203 ++ D I N L GY HE + ++I + V I+ +++ Sbjct: 508 VLVFDED-NIYYENDYLLELLGYTHEDIKTLSIFDI-LSPIHVKDIIKALTNKT-PIILQ 564 Query: 204 NFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 F T +V+ I ++ + + DIT++K L + L + D +TG+ Sbjct: 565 EFHILNKKNQTLYVKGSLNFIKDVENKPVAVFTFVDITKEKELSDMLLKQSTEDPLTGIY 624 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR + E + SL++ D D FKHIND +GH GD+VL A+A+ + Sbjct: 625 NRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKVLKAIAKVVSENI 684 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGN 382 R D+ R+GGEEFV++ P T + A LAE +R + + T S GVA E + Sbjct: 685 RNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFEEGINVTCSFGVASLEKH 744 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLA 409 ++ + L KR D+ALY AK GRN+V+ Sbjct: 745 DTKETLLKRADEALYEAKKTGRNKVVV 771 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 17/177 (9%) Query: 91 VLRKLTETEPVIIFEGIEAPAT---LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDP 147 KL E + GI + + + S + + FY F +S P+LL+DP Sbjct: 177 YFYKLIEQGDIDNLYGIYWRMRYLNILIVTAISIYTLKSEMEFYKTFLEGHSIPILLVDP 236 Query: 148 SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNF-- 205 I +AN AAL+FYGY E + W+IN LG M + +K LNF Sbjct: 237 D-TYSIANANQAALDFYGYTKEEITTLKNWDINTLGEEKMKELAR----KAKYKELNFFK 291 Query: 206 -VHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE------EQLEHAAHH 255 H+L G R V+ Y+ P+ + G +L I++DIT+++R+ +++EH + Sbjct: 292 LKHRLKSGEIRDVEVYSSPVHLNGKTYLLSIINDITKEERIRKAFEIFKEIEHLSLT 348 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 148/335 (44%), Gaps = 27/335 (8%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVD 155 ++ + + T R R Q A + P L+ RD +++ Sbjct: 90 DSAGTLVQIQSLGRDITQR--HQRIEQSLRDSQRQLADVI--DFLPDALLAIDRDKRVII 145 Query: 156 ANLAALNFYGYNHETMCQK-------------HTWEINMLGRRVMPIMHEISHLPGGHKP 202 N A G E M + ++++ + + +H+ Sbjct: 146 WNKAVAKLTGIPPEAMLGRGDYAYTVPFYGERRPQLMDLVFQSDTDLERRYAHVTREGDT 205 Query: 203 LN---FVHKLADGSTRHVQTYAGPIEIYGDKLMLC--IVHDITEQKRLEEQLEHAAHHDA 257 L F + L DG + P+ +++ I+ DIT+ KRLEE L D Sbjct: 206 LTAEGFCNALHDGHGAWILARVAPLRDAAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDP 265 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +T L NRR F+ + E + L +L +ID D FK +ND YGH GD VLC +A+T Sbjct: 266 LTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQT 325 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSI 374 L R+ D++ R+GGEEFV+LLP T L TA + E +RV+VA+ I SG T+S+ Sbjct: 326 LHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVAVAERRIETPSGPVSVTLSL 385 Query: 375 GVAHHEGN--ESIDELFKRVDDALYRAKNDGRNRV 407 GV +++ L D LYRAK GRNRV Sbjct: 386 GVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRV 420 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A ATL K + + + + + F +++PM+LIDP G +VD N AA FYGY Sbjct: 353 ANATLEEKVATRTRELQISEARFRQMFEHHASPMMLIDP-LGGAVVDVNQAAAEFYGYRI 411 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 M + +IN+ F H+LA G R V+ ++ P+E+ Sbjct: 412 AEMQAMNIAQINLQTEEDCRPQQ------TKGNCFFFSHQLASGEVRLVEVHSSPVEVDS 465 Query: 229 DKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 L+ IVHDITE++ LEE++ A +D +T L NRR E + +L+ Sbjct: 466 RPLLFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSALM 525 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP---- 344 +D D FK +NDL+GH GD++L +A + C R+ D R+GG+EFV+++ Sbjct: 526 FLDLDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENLS 585 Query: 345 --LDTALSLAETIRVSVAKVSISGLP------RFTVSIGVAHHEGN-ESIDELFKRVDDA 395 ++ A S+AE IR ++A + + SIGV + E++++L K D A Sbjct: 586 DAVNQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDMA 645 Query: 396 LYRAKNDGRN 405 +Y AK+ GRN Sbjct: 646 MYHAKDAGRN 655 >UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J0D1_COMTE Length = 458 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 164/373 (43%), Gaps = 18/373 (4%) Query: 43 SQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPV 101 ++ GP + +++ + L + + V +++ T + + + Sbjct: 70 PRMLQGP---ETDQQVIEQLRQCLAEGRFFQGSAVNYRKDGTPYHVSWNISAVRDVNGKI 126 Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 F ++ T +++ R + NSA + R+G +V N A Sbjct: 127 THFVSVQQDVTRQVESERQRDLM---------IQALNSANAPVFITDRNGYLVFVNHAFE 177 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQT 219 + GY + + + G E+ + G + F+++ DG H Sbjct: 178 HQTGYCAAEVMGRTPAMLQS-GSHTAQFYAELRDALVRGENFSRTFINRRKDGELYHAAQ 236 Query: 220 YAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 + ++ + I DI++ + E++L A+ D +TGL NR + E Q Sbjct: 237 SISALRDARHRITHYVSISKDISDLVQREQELLVRAYRDDLTGLPNRSAGSYELENCQRI 296 Query: 278 HLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFV 337 Y+L++ D D FK +ND +GH GD+VL +A+ L + R + V RWGGEEF+ Sbjct: 297 AERQGVPYALIMCDVDLFKQVNDQFGHEAGDQVLQQIAKVLRNTVRSSEHVARWGGEEFL 356 Query: 338 LLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALY 397 +++P L AL LAE +R S+A S + T+S GV + E+ +L +R D ALY Sbjct: 357 IIVPGVGLQAALELAERLRRSIASHSYAAAGTITMSFGVGSWQAGEASAQLLRRTDMALY 416 Query: 398 RAKNDGRNRVLAA 410 RAK+ GRN+V A Sbjct: 417 RAKSSGRNQVRRA 429 Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 6/115 (5%) Query: 140 APMLLIDPSRDGQ---IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 +++ D G I N A + GY E + + + I L Sbjct: 31 NAVVITDAEMAGGGPFIRYCNKAFTSMTGYATEELLGRSPRMLQGPETDQQVIEQLRQCL 90 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQ 248 G + V+ DG+ HV + K+ + + D+T Q E Q Sbjct: 91 AEGRFFQGSAVNYRKDGTPYHVSWNISAVRDVNGKITHFVSVQQDVTRQVESERQ 145 >UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JI7_THICR Length = 420 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 5/288 (1%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI-NMLG 183 ++ +A+ + + G +V N A ++ GY + + K + + + Sbjct: 134 EEQASLFAKVI--QQTADFVKITDKAGYLVFVNQALMDKTGYTEQELIGKTPAVLKSEMQ 191 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITE 241 + + L G +++ DGST + +T PI + + D++E Sbjct: 192 DQEKAKSLWDTILSGEVYHNRIMNRCKDGSTYYEETTISPIFNRDGDIEYFVSTGKDVSE 251 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 Q +++++L A DA+TG+ NRR + + + +++ D D FK IND Sbjct: 252 QVKMQQELNDLAMKDALTGIWNRRHLTDVVNTEMKRVNRYGGRFGMIMFDVDYFKQINDD 311 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 +GH GDE L +A+ ++ R+ D + RWGGEEF+L+ LAE IR ++ + Sbjct: 312 FGHDIGDETLVQIAKIVQKIVRETDYIGRWGGEEFLLIALELDASLTAKLAEKIREAIEE 371 Query: 362 VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + TVS+G + NE+ +LFKR D+ALY AK GRNRV Sbjct: 372 FVFPKVGQVTVSLGATVYHKNETEAQLFKRADEALYLAKRHGRNRVEV 419 >UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E243_GEOLS Length = 646 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 10/294 (3%) Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI---- 179 Q + +T++ + G+I N A G+ + + + ++ Sbjct: 352 QTVLEQEQRLALITSNIADGIYVMDGQGRITFVNERATEILGFAPDELNGQIAHDLFHRH 411 Query: 180 ---NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-MLCI 235 N PI I F+ +G V+ + P+ G + + + Sbjct: 412 AGGNQTVLEECPIYRVIQTRGRYEGEEQFIQ--KNGDLLMVEVASQPMLKSGRIIGSVTV 469 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DITE+K+LEEQL + D +TG+ NRR + + +SL+++D D F Sbjct: 470 FRDITERKQLEEQLRLLSITDPLTGVYNRRFLQETLLKELCRAERHGEPFSLIMLDIDHF 529 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND YGH GD+VL L + ++ R D + RWGGEEF++LLP T L A +LAET+ Sbjct: 530 KQVNDRYGHDVGDQVLRHLVKLIQKRIRSSDCLARWGGEEFIVLLPHTGLLAAAALAETL 589 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + G+ T S GVA +++++L +R D +Y AK GRN V A Sbjct: 590 LEDLRVSELKGVGCVTASFGVAVSRPGDTVEQLGQRADALMYLAKQAGRNCVRA 643 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 12/273 (4%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL 203 + G+IVDAN AA F + + ++ + +M S P Sbjct: 252 VAAVDNSGRIVDANPAACQFLQSDVAGLIGMRARDVFAPWYATLVVMEPGSGSVEIRLPY 311 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 F ++ I +L L ++ D++E+K E +L A D +TGL Sbjct: 312 GFK------EMSWLEIERSEIRDARGRLWGQLVLMRDVSERKEAESRLLQMAATDELTGL 365 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NRR+F+ + + + ++LL+D D FK IND YGH GD L + + S Sbjct: 366 YNRRRFFELARGEFNRAKRYSSPMTILLLDIDYFKRINDEYGHDAGDTALRCIVSMIASQ 425 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS---ISGLPRFTVSIGVAH 378 R D++ R GGEEFV LLP T A +AE IR + + TVSIGVA Sbjct: 426 LRSLDVLARLGGEEFVALLPETHQFDAERIAERIRSEIESTAINLFETTLFVTVSIGVAG 485 Query: 379 HEGN-ESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + + EL R D+A+YRAK DGRN+V A Sbjct: 486 YSKEMQDVGELINRADEAMYRAKRDGRNQVCLA 518 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 130/281 (46%), Gaps = 15/281 (5%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH------LP 197 ++ DG+I+ AN A+ GY+ + + E+ + + + + + Sbjct: 148 VLLVDSDGKIIFANPEAMRLLGYSFDEIEGCLIHEVIHKQQPDGTLYNSGENPFFNAIVS 207 Query: 198 GG-HKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKR-------LEEQ 248 G + + V G + + + + DIT QK+ + E Sbjct: 208 GNDYNNDDGVFTCKSGLLMPISFACRAVFKNETRDGAVIAFRDITVQKKNLQSLEGINEL 267 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 LE A DA+TG+ NR +F + SL+L D D FK +ND YGH GD Sbjct: 268 LEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGD 327 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP 368 VL LAR + S R+ D+ RWGGEEFV+ P T L++A+ LAE +R + Sbjct: 328 TVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIKLAEKLRSKIENYVFPAPK 387 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + TVS GVA +++ L R D+ALYRAK GRN+V++ Sbjct: 388 KITVSFGVATFRSSDNDITLVNRADEALYRAKEGGRNQVVS 428 >UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1L9_PELCD Length = 367 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 20/333 (6%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 L ET + + + + + + + F ++S P+ ++ +DG IV Sbjct: 28 LAETCHNLATSQKKLEELVAASTKKQLAMEMQSMEL-EQIFSSSSDPIWVV--RQDGTIV 84 Query: 155 DANLAALNFYGYNHETMCQKHTWEI-NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADG- 212 AN A L H+ + ++ + R +HLP + A G Sbjct: 85 RANSAMLRLLNRTHDAVVGHACHDVFDFCSRDSARCPLTQAHLPQSFHEWDIECPNAKGE 144 Query: 213 STRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE-------HAAHHDAMTGLLNRR 265 S ++ + A + + G ++ DIT +KR E LE H A DA+T + NRR Sbjct: 145 SDFYMVSTASLVTLDGSPGIVGHFRDITIRKRAEAALEQANTALSHLARVDALTQIPNRR 204 Query: 266 QFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RK 324 F + + SL+L D D FK ND YGH GD+VL +A L CA R Sbjct: 205 AFDEALQAEWGRLAREEGPLSLVLCDIDCFKKYNDHYGHQAGDKVLRRVAEALADCARRP 264 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL-----PRFTVSIGVAHH 379 DL R+GGEEF LLLP+TPL+ ALS+AE R +V +++ P T+S+GVA Sbjct: 265 ADLASRYGGEEFALLLPQTPLEGALSVAEKARQAVEDLALQHPTSSVKPILTLSLGVASV 324 Query: 380 EGNESID--ELFKRVDDALYRAKNDGRNRVLAA 410 + I L + D ALY+AKN RNRV+ A Sbjct: 325 IPSLHIAPTTLIESADKALYQAKNADRNRVVPA 357 >UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV7_DESAS Length = 1021 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 8/301 (2%) Query: 111 ATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 ++L L +++ + F+ ++ L++ A + + + +I++AN AA+ GY+ + Sbjct: 460 SSLVLSLCIDITDRKQAEEFFKKYKILSDCAHDFFLFINGNKKIIEANQAAVEALGYSRD 519 Query: 170 TMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + + ++ L + +++ V K DGST ++ I + Sbjct: 520 DLLTLNINDLLAL-EALKLNKNQMEQAYQNGILFETVAKRKDGSTFPIEVNLRGTFIGNE 578 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 ++ L + DIT +KR E++L++ A HD +T + NR + + + LLL Sbjct: 579 RVFLSVGRDITNRKRFEQKLQYLASHDPLTNISNRYSLEEYLTRFVAKAK-LGRTGVLLL 637 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 ID D FK +ND YGH+ GDEVL AL TL R+ D + R+GG+EFV+LL T + A+ Sbjct: 638 IDLDNFKMVNDTYGHAAGDEVLIALVNTLRLNLREEDFIARFGGDEFVVLLDNTTVAEAM 697 Query: 350 SLAETIRVSVAK-----VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGR 404 +AE +R +V + T+SIG +GN+ +L VD ALY AK GR Sbjct: 698 LIAEKLRNAVDNNAFCLCTFKTCFNLTISIGAVLIDGNQDAQKLLSIVDAALYVAKESGR 757 Query: 405 N 405 N Sbjct: 758 N 758 Score = 64.5 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 93/294 (31%), Gaps = 31/294 (10%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 +D++ SPV+ N A + + L Y +S + KY L Sbjct: 121 IDIIPSPVFF-KDINGLYQGCNKAFENYIGHSREELLGKSAYYISPKNLADKY---LAKD 176 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS--RSANYQRK 126 ++ + + E L L ++ + V + +G+ ++RK Sbjct: 177 KELFKNKGAEVFESSI-LYADDSLHEVIINKAVYFDNENKVAGLIGIITDITELKQFERK 235 Query: 127 KQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + RF + A + + + G+ + N YN + K +I Sbjct: 236 LKQTAERFRSIYEDAAIGIAIVNEQGRFLQCNAQFQKMLAYNENELRDKLISDITHPNDI 295 Query: 186 VMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITE 241 + G + DG V+ A ++ KL++ + DIT+ Sbjct: 296 SIMNFLYQELFSGRRMNYQTEKRYIRKDGQLIWVRLTASQVQTAPGEPKLVIGMAEDITK 355 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP--------GQMQHLAIAQDYSL 287 K++E+ L R++ + + + + + + SL Sbjct: 356 HKQVEKALITE-----------RKRLFSLLDELPAAIFLLAKDYTIRYSNRLSL 398 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 15/194 (7%) Query: 69 HDIIEILTVQRKEEETALSCRLVLRK---LTETEPVIIFEGIEAPATLGLKASRSANYQR 125 D IE+ ++ ET +S RL+ + + E L + + +Q Sbjct: 57 EDFIEV----FEQNETLVS-RLIKKDGTFVEAQLSATFMENNNKEYYLLEIKNSNQQHQE 111 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM--LG 183 + F + +P+ D +G N A N+ G++ E + K + I+ L Sbjct: 112 DQLNFLQQLIDIIPSPVFFKDI--NGLYQGCNKAFENYIGHSREELLGKSAYYISPKNLA 169 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 + + E+ G AD S V +K+ ++ I+ DITE Sbjct: 170 DKYLAKDKELFKNKGAEV-FESSILYADDSLHEVIINKAVYFDNENKVAGLIGIITDITE 228 Query: 242 QKRLEEQLEHAAHH 255 K+ E +L+ A Sbjct: 229 LKQFERKLKQTAER 242 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 14/176 (7%) Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 E +++ + + + EP ++ G+ T + ++ +RK Sbjct: 316 EKRYIRKDGQLIWVRLTASQVQTAPGEPKLVI-GMAEDITKHKQVEKALITERK-----R 369 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 F L + P + ++D I +N +L +G C +HT+ ++ + +P Sbjct: 370 LFSLLDELPAAIFLLAKDYTIRYSNRLSLKQFGNPGTKRCYEHTFGLSKPCKNCIP---- 425 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGP-IEIYGDKLMLCIVHDITEQKRLEE 247 H+ D + R Y P ++ G L+L + DIT++K+ EE Sbjct: 426 ---FKVFENNTLTQHEFKDKNGRKYHFYNYPYTDVDGSSLVLSLCIDITDRKQAEE 478 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 94/321 (29%), Positives = 148/321 (46%), Gaps = 11/321 (3%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQR---KKQGFYARFFLTNSAPMLLIDPSRDG 151 LT P+ + EG E + + +Y+ + + + + M I DG Sbjct: 172 LTHWVPLKVNEGDEGVVVVFHDITERKHYEEALARSEDRFRSVVECSLTGMHFISLEADG 231 Query: 152 QIVD--ANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH-K 208 +++ AN AA + G +H + E + + G P + H + Sbjct: 232 RLLLTGANPAADSILGISHWPLVGSDVEEAFPELKDHFLLDLYRRVAAGELGPQSLEHER 291 Query: 209 LADGSTRHVQTYAGPIEIYGDKLMLCI-VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 + T+H + + DITE+ R++E+L A+ D +T L NRR+ Sbjct: 292 RLESKTKHYDLRVFRT----GPGTISVEFADITERTRMQEELREASERDPLTSLYNRRKL 347 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 Y + + +L+L+D D FK IND +GH GD VL +A + + R D+ Sbjct: 348 YQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGHDSGDLVLTQVAELISAILRSTDI 407 Query: 328 VFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDE 387 + R+GGEEFV+ P T +D A LAE IR S+A S + T+S+G++ E + I+ Sbjct: 408 LARYGGEEFVIACPETDMDGAAVLAEKIRSSIAMFSFPTVGAVTISVGISLLESKDDINA 467 Query: 388 LFKRVDDALYRAKNDGRNRVL 408 L KR D ALY AK GRNRV+ Sbjct: 468 LIKRADTALYAAKEMGRNRVV 488 Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 9/144 (6%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A ++G + + ++ ++++ +G I N + + + Sbjct: 71 ALNSMGDRITSQIQELESEKSRLDTILRGMGEGVMVVLT--NGTITLVNPPFQSLFSFRG 128 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI-Y 227 + K+ E + ++ + K L ++ D T + T+ P+++ Sbjct: 129 DEE-GKNIRETL----NIPEMIATFDEVREQGKELVREFQIQDAGTT-LLTHWVPLKVNE 182 Query: 228 GDKLMLCIVHDITEQKRLEEQLEH 251 GD+ ++ + HDITE+K EE L Sbjct: 183 GDEGVVVVFHDITERKHYEEALAR 206 >UniRef50_C1SNT9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNT9_9BACT Length = 626 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 20/358 (5%) Query: 62 LSDLQNQHDIIEI------LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 L D+ ++ +++ + + ++ LS L+ + + + P+ L Sbjct: 279 LEDIFLNNEGVKLILAPKDEVMGQLKKSNILSAILITLIVLLISIPLSWLASYLPSRLQS 338 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + ++ R T+ + G+I + + G++ + K Sbjct: 339 SLLNAYEKIKEYNKMIDRHISTSKTDI-------HGRITEVSSKFTEITGFSKSEIVGKT 391 Query: 176 TWEINMLGR-RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML- 233 + + ++ G + G V P ++ Sbjct: 392 HRILRHPDNPSELFESMWLTISNGDTWQGEIKNVNKTGEEYWVHQTISPEVDKYQTIIGF 451 Query: 234 -CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 I DIT++KR+EE + D +T L NR + + + +H D+ +LID Sbjct: 452 NSISRDITDKKRIEE----LSVTDRLTSLYNRHKLDDVLQSEYSRHQRHNTDFCAVLIDI 507 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FK++ND +GH GD+VL LA L++ R+ D + RWGGEEF+++ + L+ LA Sbjct: 508 DHFKNVNDTHGHQTGDKVLVKLAELLKANTRESDYIGRWGGEEFLIIAVESNLEGTAFLA 567 Query: 353 ETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E +R V + + + T+S+G A ++ E+I R DDALY AK GRN+++ A Sbjct: 568 EKLRRMVEETDFPIVGKITISLGAAQYKTGETIAHFINRADDALYTAKQTGRNKLVNA 625 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 90/360 (25%), Positives = 151/360 (41%), Gaps = 29/360 (8%) Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 E ++ +L L +L + + + ++ L + Sbjct: 7 HNSEVLIRVNTQLRLYQLQKQLE-LQNQSLQEQIRLSQIYLHDRQVAEATSKLLEKAIAA 65 Query: 138 NSAPMLLIDPSR-DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 +++ DP++ D I+ N GY + + + R P + +I Sbjct: 66 TQNGVVITDPNQPDNPIIYVNFGFERLTGYPAHEILGSNCRFLQG-NERDQPALDDIRRA 124 Query: 197 PGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEE----- 247 + + K DG+ + + P+ +L + I D+TE+K+ EE Sbjct: 125 IAEAEECRVILKNYRRDGTMFWNELFISPVRNEQGELTNFIGIQTDVTERKKSEEALERS 184 Query: 248 ---------QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +L+ A +D +T + NRR+F + + +L+L D D FK Sbjct: 185 RIALKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPY 244 Query: 299 NDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 ND +GH GD+ L +AR + R DLV R+GGEEF ++LP TP++ A+ +AE IR Sbjct: 245 NDTFGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRK 304 Query: 358 SVAKVSISGLPR-----FTVSIGVAH--HEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 V + + TVS+GVA S+D L + D+ALY+AKN GRN + A Sbjct: 305 QVENLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNCTVIA 364 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 89/327 (27%), Positives = 134/327 (40%), Gaps = 30/327 (9%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + + S K+ Y F A + DG + N A N +G++ Sbjct: 59 DRMQAQLSELNRDIAAKEARYRSIF--QCAAEGVFRTGADGSFAEVNPAMANIFGWSSVD 116 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 +H + L + L G V + DG+ V+ +E Sbjct: 117 AFMQHNTSLASLFSSPQAHCEYLDRLCSAGAVSRYEAVLRRRDGTPVWVEISTQALETAP 176 Query: 229 DKLM----LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 + + +V D+T +R+ E+L H A D +TGL NRR F + + + Sbjct: 177 ETACGATHVGVVLDVTAHRRMLEELSHMARTDPLTGLNNRRFFMEAARAEVERMQSSGRP 236 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 SLL++D D FK +ND +GH GD VL L+ L R D+ R GGEEF +LLP T Sbjct: 237 LSLLMLDIDHFKRVNDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETG 296 Query: 345 LDTALSLAETIRVSVAKVSISGLP-RFTVSIGVAHHEG---------------------N 382 A AET+R +VA ++ +G T S+G+ + Sbjct: 297 HAEACRAAETLRQAVAGMAFAGHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCG 356 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLA 409 + ++ L KR D ALY AK +GRNR Sbjct: 357 QVVEILLKRADIALYAAKKNGRNRTEV 383 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 163/376 (43%), Gaps = 19/376 (5%) Query: 50 YSVSSQKELPKYLSDLQNQHDIIEIL--------TVQRKEEETALSCRLVLRKLTETEPV 101 Y + ++ L + D++ D+ + R + + + T Sbjct: 764 YGYTREEFLAMTIRDIRPPEDVPLLEQYILQINPHFNRSGQWRHRKANGEIIDVEITSHG 823 Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAA 160 + + G +A L + ++ Q RF AP+ ++ + DG+IV N A Sbjct: 824 LEYAGRKARLVLAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAW 883 Query: 161 LNFYGYNHETMCQKHTWEINMLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHV 217 GY+ + + W G R V ++ ++ + G + F + G TR Sbjct: 884 TELSGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIW 943 Query: 218 QTYAGPIEI--YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + P+ G +L++ + DITE+K+ EEQL H+ HD +TGL NR E Sbjct: 944 DFSSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAI 1003 Query: 276 MQHLAIAQD-YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + +++L ID DRFK +ND GH GD++L +A L+ C R D V R+GG+ Sbjct: 1004 KRKQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGD 1063 Query: 335 EFVLLLPRTPL-DTALSLAETIRVSVA-KVSISGLPRFT-VSIGVA-HHEGNESIDELFK 390 EFV+LL + A +A+ I ++ FT SIG+ ++ EL + Sbjct: 1064 EFVILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVR 1123 Query: 391 RVDDALYRAKNDGRNR 406 D A+YR+K GR R Sbjct: 1124 NADIAMYRSKEAGRAR 1139 Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + R R+ + Y FF N P+ + D ++ N A + YGY E Sbjct: 716 TERKRIEEILRESEEKYRLFFDANPNPLWVYDL-ETFAFLEVNQATIEHYGYTREEFLAM 774 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 +I + + + P ++ + H+ A+G V+ + +E G K L Sbjct: 775 TIRDIRPPEDVPLLEQYILQINPHFNRSGQWRHRKANGEIIDVEITSHGLEYAGRKARLV 834 Query: 235 IVHDITEQKRLEEQLE------HAAHHDA 257 + HDITE+ + E+ L+ H A DA Sbjct: 835 LAHDITERLKAEKALQESKERFHRAIVDA 863 Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 7/150 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 + + R + Y S + G + N A ++ Sbjct: 287 RYISLRPFYRLQQIEAALRASESRYRGIVEDQSE--FICRYRPGGTLTFVNQAYCRYFQK 344 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPI 224 + W++ + + I+ L + + H+ L+ G R Q I Sbjct: 345 TPAAVLDNTFWDL-IYSEDQPQVAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVI 403 Query: 225 EIYGDKLM--LCIVHDITEQKRLEEQLEHA 252 ++ + DIT+ K++E L Sbjct: 404 MDEKRNIIEFQAVGRDITQLKQVEAALRQL 433 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 8/138 (5%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET-MCQ 173 + ++ R++Q P++L + ++ N +G++ E Sbjct: 597 TETKQTQENLRQQQELLKTIVE--QIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQKG 654 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 E +++ I G + + + DG R + T +++ + Sbjct: 655 DLLAEFEPESEYRQSVLNYIKSAQGKWRDFKILVR--DG--RIIDTSWANVKLSDGT-SI 709 Query: 234 CIVHDITEQKRLEEQLEH 251 I DITE+KR+EE L Sbjct: 710 AIGQDITERKRIEEILRE 727 Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 77/262 (29%), Gaps = 21/262 (8%) Query: 11 LLTSPVW-IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQH 69 +L + W ++ ++ + N A+ + + R S + + + Sbjct: 349 VLDNTFWDLIYSEDQPQVAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKR 408 Query: 70 DIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 +IIE V R + LR+L E + + A + K Q Sbjct: 409 NIIEFQAVGR-DITQLKQVEAALRQLNEELEQRVEQRTAELAAEIRERQEIETALIKSQA 467 Query: 130 FYARFFLTNSAPMLLIDPSRDG---QIVDAN---------LAALNFYGYN-HETMCQKHT 176 Y + S + + +G I + N + GY+ E Sbjct: 468 KYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEW 527 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKP---LNFVHKLADGSTRHVQTYAGPIEIYGDKL-- 231 W + + + + G L + + +G + I + Sbjct: 528 WRSKIDPETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPL 587 Query: 232 -MLCIVHDITEQKRLEEQLEHA 252 +L DITE K+ +E L Sbjct: 588 KILGTHRDITETKQTQENLRQQ 609 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 17/330 (5%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 L + E + T + + RK+ + NSA +I S Sbjct: 102 LSPIIIPEQSRITRIIVTAIDITAKKQLEDALKMSRKRFEA-----VVNSAYDGIISVSS 156 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV--MPIMHEISHLPGGHKPL---- 203 + +I N AA +G + E+ K + L R S+ P +P+ Sbjct: 157 ESRIELINTAACEMFGVD-ESYVGKRLETLLPLRFRSNHESYFRAFSNSPINSRPMHARA 215 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 + + DGS + I + M I+ DI+E+ RL E+L+ AA D +TG+ N Sbjct: 216 SVMGLRRDGSEFPQEVTIAKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIAN 275 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR+F + + + SLLL+D D FK +ND +GH +GD+ + +L R + R Sbjct: 276 RRRFDELVKQEVQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLR 335 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGV-AH 378 + D++ RWGGEEF++LLP T LD A + AE IR+++A S TVSIG+ A Sbjct: 336 EVDILGRWGGEEFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISAS 395 Query: 379 HEGNESIDELFKRVDDALYRAKNDGRNRVL 408 +++D + +R D ALY AK GRN + Sbjct: 396 QGPQDNVDNMVRRADTALYLAKKQGRNCCI 425 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 110/407 (27%), Positives = 164/407 (40%), Gaps = 22/407 (5%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT 76 W+V P E L+ N AA G + P+ + + + E Sbjct: 286 WLVDPREGVLVDVNEAAARFYG--FHRTEMRGMPVSKINQLSPEAVREAMARVQRGEQKV 343 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 + +R++ + G E ++ + R ++ Sbjct: 344 LYFPHRL----ASGEIREVEVHSGAVDVGGREYLHSIIHDITERRELARNRRQLVEIL-- 397 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFY-----GYNHETM-CQKHTWEINMLGRRVMPIM 190 ++P + +G++V N A + G + E+ + E+ L + Sbjct: 398 -EASPQFIAMAEAEGRLVYLNRAGRALFREWLPGVSPESKDLTVNFAEVLRLAHPPWAVR 456 Query: 191 HEISH-----LPGGHKPLNFVHKLADGSTRHVQ--TYAGPIEIYGDKLMLCIVHDITEQK 243 + GH + ADG +Q A E + + DITE+K Sbjct: 457 RILEEGLPTAAREGHWMGETAFRRADGGETPLQQLIVAHRDETGRVERYSTVAEDITERK 516 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 R E+ L + A HD +TGL NRR E S++L D D FK +ND +G Sbjct: 517 RREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFDLDHFKRVNDTHG 576 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H+ GD+VL LA + R D+V RWGGEEF+L+LP T A LAE +R VA+ Sbjct: 577 HNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQLAEVLRAYVAEAR 636 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S+G A +E D LFKRVD ALY AK +GRNR AA Sbjct: 637 FPIPDPVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRAQAA 683 >UniRef50_Q2BQ31 PAS/PAC sensor hybrid histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ31_9GAMM Length = 1079 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 9/302 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 A +A R Q +R + + +L+ G I+ AN A GY + Sbjct: 773 RNRTVARLNAKLARANQTIISRQKMVDR-FVLISTYDIAGHILSANRAFCEAMGYQENEV 831 Query: 172 CQ--KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + + + L G ++ + + Sbjct: 832 LGHQMSRYTCPDQPTALFDQIWAQLRLQQS-WSGELKCATKQGECVYLNVNIEAMLRDSE 890 Query: 230 KL-MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + I +IT+QKR+EE + D +TGL NR + + +H +S+L Sbjct: 891 VVGYRAISENITDQKRIEE----LSVTDTLTGLNNRLKIDELLAAQMERHERHGLKFSVL 946 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 L+D D FKH+ND +GH GD++L LA L+S RK D V RWGGEEFV++ T A Sbjct: 947 LLDVDNFKHVNDNFGHDVGDKLLKDLANVLKSNVRKIDTVGRWGGEEFVVICENTSSANA 1006 Query: 349 LSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 LAE +R +A+ + + TVSIG++ +S+ +FKR D ALY AK++G+N+V+ Sbjct: 1007 YVLAEKLRTIIAETDFGVVGQKTVSIGISELYDGDSLSTIFKRADQALYVAKHNGKNQVM 1066 Query: 409 AA 410 Sbjct: 1067 VG 1068 >UniRef50_D0J6P1 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Proteobacteria RepID=D0J6P1_COMTE Length = 462 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 139/310 (44%), Gaps = 6/310 (1%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLT---NSAPMLLIDPSRDGQIVDANLAALNF 163 + + + + + Q R L N+ ++ RD IV N A Sbjct: 115 RDEKGVIRHFVAVQRDISERVQAEQERALLARALNATNDGILITDRDSTIVFVNEAFEAL 174 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK-PLNFVHKLADGSTRHVQTYAG 222 GY+ + + T + L GH F+++ G + + Sbjct: 175 TGYSAAELLGQPTEMLRSGLHEPEFYAQLQEALSLGHNFRATFINRHKSGGVYYAEQSIA 234 Query: 223 PIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 + ++ + DI+ + E +L A+ D +TGLLNR + Q+Q Sbjct: 235 ALRDESGQISHYVGASKDISRMVQREMELRERANRDKLTGLLNRHAGETELKRNQLQAQN 294 Query: 281 IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL 340 + Y ++L D D FK +ND +GH GD VL +A L R+ D RWGGEEF+++L Sbjct: 295 QLRPYGVILGDIDLFKQVNDRFGHVAGDRVLKMVAHVLSGKVRRYDRAVRWGGEEFLIVL 354 Query: 341 PRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAK 400 L A LAE IR +VA+ + + RFT+S+GV E E+ D+L KR D ALYRAK Sbjct: 355 SDASLGVAAGLAERIRCAVAECADPEVGRFTISLGVGLWEPGETEDDLLKRADAALYRAK 414 Query: 401 NDGRNRVLAA 410 + GRN+V A Sbjct: 415 HRGRNQVAIA 424 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 8/121 (6%) Query: 141 PMLLIDPSRDGQ---IVDANLAALNFYGYNHETMCQKHTWEIN--MLGRRVMPIMHEISH 195 +++ D DG+ I N A GY + + + + + V+ +HE S Sbjct: 27 AVMITDARLDGEGAVIEYCNAAMCEMTGYTEAELLGRSPRMLQGPLTDQLVLQRLHE-SL 85 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G + V+ DGST HV+ P+ + + + DI+E+ + E++ A Sbjct: 86 EQGLPFQGSVVNYRKDGSTYHVEWNISPVRDEKGVIRHFVAVQRDISERVQAEQERALLA 145 Query: 254 H 254 Sbjct: 146 R 146 >UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2KVB5_BORA1 Length = 429 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 101/391 (25%), Positives = 170/391 (43%), Gaps = 14/391 (3%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPKYLSDLQNQHDIIEILTVQRKEE 82 ++Y+N A + + P + + K + L D + T +++ Sbjct: 40 IVYSNPALCAMTGYTAEELIGNSPKILQGPLTDKTVINRLRLCLKNGDYFQGSTFNYRKD 99 Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 + L + + PV +G + + +++Q A+ N+ Sbjct: 100 GSP-----YLVEWNIS-PVRGAQGGIEHFVSVQRDITARTLAQQRQALLAQAL--NATHD 151 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 ++ G I+ N A GY+ + + Q N + +S + GG + Sbjct: 152 AVLIADDKGHILFTNQAFQRAIGYSAKEVHQLTPQATNSGQPHPDFYKNLLSVIHGGKRT 211 Query: 203 L-NFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMT 259 F ++ A GS +++ + K + ++ DI++ E+ L DA+T Sbjct: 212 RHTFPNQNAKGSNAYIEQVITTLTDESGSVKHYISVLKDISQFVAREKLLSKQVRSDALT 271 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 GLLNRR + + YS+++ D D FK IND +GH GD VL A + Sbjct: 272 GLLNRRGAAAKIQRLHRAAHQSGRFYSVIMADIDHFKKINDQFGHLLGDTVLKRCANLIR 331 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHH 379 R+GD V RWGGEEF++LLP PL A++LAE IR ++A ++ + T+S+GV Sbjct: 332 DNVREGDAVARWGGEEFLILLPNCPLIKAVALAERIRNTIATLTDPITGQVTLSLGVGTS 391 Query: 380 EGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E+ L +R D ALY+AK GRN+V A Sbjct: 392 SPAETPQSLIQRADKALYKAKAQGRNQVAIA 422 Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 8/124 (6%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN-MLGRRVMPIMHEISHLPGGH 200 +L+ + IV +N A GY E + + L + + + G + Sbjct: 29 VLITTAGVEPIIVYSNPALCAMTGYTAEELIGNSPKILQGPLTDKTVINRLRLCLKNGDY 88 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEI--YGDKLMLCIVHDITEQKRLEEQLEHA-----A 253 + + DGS V+ P+ G + + + DIT + +++ A Sbjct: 89 FQGSTFNYRKDGSPYLVEWNISPVRGAQGGIEHFVSVQRDITARTLAQQRQALLAQALNA 148 Query: 254 HHDA 257 HDA Sbjct: 149 THDA 152 >UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=Vibrio RepID=C9E5K7_VIBCH Length = 423 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 94/390 (24%), Positives = 165/390 (42%), Gaps = 18/390 (4%) Query: 29 ANSAAKLLMQ---DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETA 85 AN A + D + Q ++ +E+ L + E +T +++ + Sbjct: 36 ANPAFCKMTGYAIDELYGQSLKMLQGPATDQEVINRLRHCLTSGEYFEGMTTNYRKDGSP 95 Query: 86 LSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL 144 R + + E + F ++ T + + + P+L+ Sbjct: 96 YLVRWNISPVRDEVGDITHFVSVQQDMT-------AYAKVEDTSKILGQALDAAAEPILV 148 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHT--WEINMLGRRVMPIMHEISHLPGGHKP 202 D +I+ N + + GY + ++ + + S + Sbjct: 149 TDAHA--KIIFVNQSFIQVSGYEESELIGNTPTLFKSGLHDDDFYKNVKA-SLMTKKTFQ 205 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 F++K DG+ H + I+ + + + D+TE+ R E+ L +A D +TG Sbjct: 206 AIFINKRKDGTLYHSEQSISAIKDQAGNITNYVSVGKDVTERLREEQALRESATVDQLTG 265 Query: 261 LLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLES 320 L NR + L+ + SL+L D D FK IND +GH GD++L ++ L Sbjct: 266 LFNRNHGKALLSEAYSFTLSREEPMSLILCDIDHFKQINDSFGHPVGDQILAQVSGLLRK 325 Query: 321 CARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHE 380 R D V RWGGEEF++LL A LAE +R+ +A + + TVS+GVA Sbjct: 326 SVRGNDRVIRWGGEEFLILLENCTDMVAAELAERLRLRIASEQFQSVGKVTVSLGVASLF 385 Query: 381 GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ES+++L R D+ALY++K +GRN++ A Sbjct: 386 QKESLEQLISRCDEALYKSKRNGRNQLTLA 415 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 138/305 (45%), Gaps = 10/305 (3%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG--QIVDANLAALNFYGYNHETMC 172 K R K + + F M LI +G + + N A G +T+ Sbjct: 275 TKRKRDEKRLAKMSKEFEQVFHGTQDAMFLIAVEEEGGFRFIRTNKAHQRATGLELKTVR 334 Query: 173 QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA-DGSTRHVQTYAGPIEIYGD-K 230 K E+ + + PL++ +L G TR T P+ Sbjct: 335 GKTPLEL-LGEEAGAQVSANYQRCVDAGAPLSYEEELVLPGGTRVWHTTLTPVYEEERIT 393 Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 ++ DITE+KR EE L + A D +TGL NRR F I + + Q +L+ + Sbjct: 394 SIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLALISL 453 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK IND +GH+ GD L LA L +C R+ D + R GGEEF L+ P T A Sbjct: 454 DIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRAGATE 513 Query: 351 LAETIRVSVAKVSI---SGLPRFTVSIGVAHH--EGNESIDELFKRVDDALYRAKNDGRN 405 LAE IR + + I S T+S+GV + N++ID L KR DDALY AK GRN Sbjct: 514 LAERIRSELERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAKRTGRN 573 Query: 406 RVLAA 410 R + + Sbjct: 574 RTVTS 578 Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 58/194 (29%), Gaps = 23/194 (11%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTN---SAPMLLIDPSRDGQIVDANLAALNFYG 165 L R +Q +++ F + FL AP ++ ++VD N AA +G Sbjct: 8 QALLQDLLEERETPWQIQQRLFSRKEFLETVLYQAPDAIVTLDTTYRVVDWNAAAERIFG 67 Query: 166 YNHETMCQKHTWEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP 223 Y+ E C + + V G+ V+ P Sbjct: 68 YSREEACGHELDSLITSAETASEAKCLSRQLLDQQPVVTTETVRFTKSGTPVQVRVSGAP 127 Query: 224 IEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI- 281 I G ++ + DI+E+ E+ L E Q Sbjct: 128 IVTDGTLHGIVAVYTDISERIATEDALREQ---------------KRAAEQAHGQWQRTF 172 Query: 282 -AQDYSLLLIDTDR 294 A + LIDTD Sbjct: 173 DAVPDLIALIDTDH 186 Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 71/220 (32%), Gaps = 16/220 (7%) Query: 43 SQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRL----VLRKLTET 98 +L + S + E L +Q ++ TV+ + T + R+ ++ T Sbjct: 76 HELDSLITSAETASEAKCLSRQLLDQQPVVTTETVRFTKSGTPVQVRVSGAPIVTDGTLH 135 Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 V ++ I + G + R F ++ P L+ D +I+ N Sbjct: 136 GIVAVYTDISERIATEDALREQKRAAEQAHGQWQRTF--DAVPDLIALIDTDHRIIRTNR 193 Query: 159 AALNFYGYNHETMCQKHTWEINMLGRRVMPIM---HEISHLPGGHKPLNFVHKLADGSTR 215 A G + + + R P H G P+ G Sbjct: 194 AMAERLGRPAAELTGCACHTV--VHNRETPPAFCPHSQLLDEGDSSPVEITEDNLGG--- 248 Query: 216 HVQTYAGPIEIYGDKLMLC--IVHDITEQKRLEEQLEHAA 253 P+ +L+ I DIT++KR E++L + Sbjct: 249 DFLITVTPLHDAEGRLLGSVHIARDITKRKRDEKRLAKMS 288 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 111/207 (53%) Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 H+ DGS V+ G KL+ C DITE+KR +E++ + A DA+TG++ Sbjct: 22 FETRHRRKDGSDITVEITTNAAYYKGVKLIFCNCRDITERKRDQERIRYLATTDALTGIM 81 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NR +F + + ++++ D D FK +ND YGH GDEVL + + Sbjct: 82 NRGEFTRHLTKEIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAI 141 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGN 382 R+ D+ RWGGEEF+LLLP T L A+ AE +R ++A+ R T S GV Sbjct: 142 RRVDVHARWGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFKQPERVTASFGVTTLGPR 201 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLA 409 + D L KR DDALY AK+ GRNRV A Sbjct: 202 DRFDVLIKRADDALYLAKHAGRNRVEA 228 >UniRef50_B6BNR7 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNR7_9PROT Length = 666 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 89/320 (27%), Positives = 144/320 (45%), Gaps = 30/320 (9%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 L LK ++ K+ + + ++ A + +G+I + A G Sbjct: 357 KRRMDKVLALKTAQL----NKQNNIFNKNISSSKADI-------NGKITYVSDAFCYISG 405 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGP 223 Y E + K T I+ I ++ G ++ DGS V T P Sbjct: 406 YTREEIIGK-THSISRDKEIPSDIYKDLWMTISSGHSWRGELKNRKKDGSPYWVDTVISP 464 Query: 224 IEIYGDKLML--CIVHDITEQKRLEE--------------QLEHAAHHDAMTGLLNRRQF 267 I + ++ I+ D+T +K LEE LE+ A D +T + NR + Sbjct: 465 IFDSKNNIIEYDSIITDVTLKKVLEEFNKKLEIEVKERTIVLENLAITDKLTNIYNRLRL 524 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 +L + YS++LID D FK +ND YGH GDEVL ++ ++ R D+ Sbjct: 525 DQELSYNYKNYLRYDKIYSIILIDIDFFKKVNDTYGHQVGDEVLQKVSFIMKELIRSTDI 584 Query: 328 VFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDE 387 + RWGGEEF+++ P T L+ A +L + IR ++ + + T+S G+A N Sbjct: 585 LGRWGGEEFMIISPNTDLNGAYTLTQNIRSNIENTIFDSVNKVTISAGIAQINSNLDEKS 644 Query: 388 LFKRVDDALYRAKNDGRNRV 407 + + D+ALYRAK++GRNRV Sbjct: 645 IITKADEALYRAKDNGRNRV 664 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 7/268 (2%) Query: 146 DPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLN 204 D I+ + A + GY + K IN + + + L G Sbjct: 348 TTKPDSTILSVSSAFESSSGYTKSELIGKKMNIINNPQQDKKIFLELWSTILKGEVWSGI 407 Query: 205 FVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 ++ G ++ P K+ + + DIT + +LE A D +TG Sbjct: 408 MKNRTKKGDIYWLEQNVVPTLDKDKKIESFVSVGVDITAKV----ELERLASIDKLTGAY 463 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR + H+ +++ SL++ D D FK +ND YGH GD VL + R + S Sbjct: 464 NRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAGDAVLSDVGRIISSTI 523 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGN 382 RK D+ R+GGEEF+++ P T AL LA+ IR + + + T+S+GVA N Sbjct: 524 RKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEVGHKTISLGVATLIAN 583 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLAA 410 + ++ + KR DDALY AK +GRNRV+ Sbjct: 584 DEVENIIKRADDALYIAKKEGRNRVVLG 611 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 29/385 (7%) Query: 34 KLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLR 93 + + D+ ++ S S K+ D++ Q++ ++R + + Sbjct: 73 RGISIDMFLGLMKYYRQSYSDLIRESKFKDDIKYQYE----QIIKRFFDRVEI---GFCT 125 Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 + T I + ++ + ++ Y F + S P+ ++ DG I Sbjct: 126 EWASTGDEDIVKELQRNNRVMTN----------EKNKYLTIFESLSMPVFIV--GLDGTI 173 Query: 154 VDANLAALNFYGYNHETMCQKHTW--EINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKL 209 + N AA Y+ Q + + + V P + + + + G F + Sbjct: 174 ENMNHAASGMLHYDTAPGTQYYGEKDTLKLFFIEVFPWLDKSFKNFISGTDTKKTFETAI 233 Query: 210 ADGSTRHVQTYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 D +++ ++I G + I+ DIT++K +E++LE A D +TG NRR F Sbjct: 234 NDKGQFFFISFSRSLDISGKFSNAIAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFL 293 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 ++ E + +L++ID D FK IND +GH GD++L L S R D+ Sbjct: 294 NLFEKEMKRSKRYNYTLALVMIDIDHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIF 353 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----SGLPRFTVSIGVAHH-EGNE 383 RWGGEEF++LLP T L A S AE +R ++A+ + FTVSIG N Sbjct: 354 ARWGGEEFIILLPETDLLQASSAAERLRGALAQSELRTNDGTNINFTVSIGFTIFGNKNI 413 Query: 384 SIDELFKRVDDALYRAKNDGRNRVL 408 IDE+ K+ D ALY AK GRNR + Sbjct: 414 LIDEIIKKADKALYLAKKQGRNRAV 438 >UniRef50_B3QI56 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Rhizobiales RepID=B3QI56_RHOPT Length = 338 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 133/289 (46%), Gaps = 15/289 (5%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + + ++I G+++ N AA GY+ +++ L + H Sbjct: 36 YAIDRIADMIIWLDEHGRVMFVNAAATKLLGYSQAEFLSMTVLDLDPLFDADIWRDHWRE 95 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH--- 251 G L V++ DG V+ +E G K+ IV DITE+KR EQL Sbjct: 96 VESRGSFTLETVNRTKDGVDVAVEVTVNFVECLGRKMNCSIVRDITERKRAAEQLAEMHR 155 Query: 252 ---AAH-HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 A+ D +T + NRR+F + H+ SL+L+D D FK ND YGH +G Sbjct: 156 KLVQANLTDELTAIANRRRFDGVLSTSYATHMRSGAPLSLILLDIDHFKAFNDRYGHLEG 215 Query: 308 DEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 D L +A + R DL RWGGEEFV +LP T AL++A +R ++ ++I Sbjct: 216 DRCLQRIAEVIDRRMFRAADLAARWGGEEFVCILPDTDEAGALAVATALREAILDLAIPH 275 Query: 367 LPR-----FTVSIGV--AHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 T S+GV A +++ LF+ D LY AKN GRNR++ Sbjct: 276 EASPIARVVTASLGVVTATCVPDKTAHSLFETADALLYEAKNLGRNRIV 324 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 101/365 (27%), Positives = 156/365 (42%), Gaps = 13/365 (3%) Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT-ETEPVIIFEGIEAPATLGLK 116 +P L+ L +I + + A + R +T + V + + Sbjct: 215 MPMRLARLDGSTFDAQIKATKLPSQGAAPEYMVEARDITGQIRAVAALRHMNDTLEQQVA 274 Query: 117 ASRSANYQRKKQGFYARFF---LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 A + + + AR F L + P L G+ + N A +G Sbjct: 275 ARTRELDEERARAVEARAFVESLLEAVPNPLWWKDTRGRYLGYNGAFRELHGVGPTDWIG 334 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD---- 229 + T E+ G + + L + + F L + R + +G Sbjct: 335 RTTAEMVNPGFAAIASQADTQALAEAGR-VQFEAHLEVAADRALDVVVNKTVWHGRDNRP 393 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 + ++ ++ DITE+KR+E +L A D +TG+ NRR F + + + L+ Sbjct: 394 EGVIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALM 453 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 +D D FK IND +GH GD + ALA R D++ R GGEEF ++L T LD AL Sbjct: 454 LDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGAL 513 Query: 350 SLAETIRVSVAKVSIS---GLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRN 405 +AE +R +VA + I G FT SIGVA EG+ +ID + R D ALY AK GRN Sbjct: 514 LVAERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRN 573 Query: 406 RVLAA 410 +V Sbjct: 574 KVAVG 578 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 4/134 (2%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQK 174 +A A +RK F A F L+ DG + DAN A + G + + + + Sbjct: 6 RAETPAERRRKGPRFGANFMTVLEVSRELVCLCVDGVVADANSAGIAMLGAGSADQVVGR 65 Query: 175 HTWEINMLGRRVMPIMHEISHLPG-GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 ++ +G ++ ++ HL + DG T + P G + Sbjct: 66 AFRDL--VGGDYAGVIDDLLHLKEIEDSAFPIKVRHLDGGTFEAELQIHPARELGPAHAV 123 Query: 234 CIVHDITEQKRLEE 247 DI+ Q RL Sbjct: 124 VTARDISHQGRLAR 137 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 99/314 (31%), Positives = 144/314 (45%), Gaps = 17/314 (5%) Query: 110 PATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 +TL + + + + F P+ DP DG + N A +G + Sbjct: 167 ASTLERRVTERTCQLDEARRFAESLVELLPNPLWFTDP--DGSLRLYNRAFREMFGVDSG 224 Query: 170 TMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEI- 226 + T + + M ++S GG L F DG R + G + Sbjct: 225 DWHGQPTHGVLPQPLAGLDQMADMSLKVGGPGGLAFEASLDHQDGQ-RTLVVNKGLVRSD 283 Query: 227 -----YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 + IV DITE+K +E QL H A D +TG LNRR F+ E + Sbjct: 284 CRGTADEPMGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRY 343 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 S+L+ID D FK +ND +GH+ GD+ L A + + R+ D R GGEEF +LP Sbjct: 344 GNAVSVLMIDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLP 403 Query: 342 RTPLDTALSLAETIRVSVAKVSIS-----GLPRFTVSIGVAHHEGNE-SIDELFKRVDDA 395 T L AL +AE +R +V +++ R T S+GVA + E ++D++ R D A Sbjct: 404 ETTLAGALLVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTA 463 Query: 396 LYRAKNDGRNRVLA 409 LYRAK +GRNRVLA Sbjct: 464 LYRAKAEGRNRVLA 477 >UniRef50_Q6AJ00 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ00_DESPS Length = 571 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 15/339 (4%) Query: 79 RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN 138 + + + + R+V + + + + I T + + F + Sbjct: 234 KCKNSSPIWARVVGKAIDQNDLNRGIIWIAEDITEQRTTQKELQLAYNE---LEAIFNNS 290 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHE-TMCQKHTWEINMLGRRVMP--IMHEISH 195 +LL+ +R +I N GY+ + K +I++ + H S Sbjct: 291 LVGILLLGQNR--KIHRVNKRLATILGYDEPLELLGKGVEKIHLSEKNFKEFGEKHYNSL 348 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG----DKLMLCIVHDITEQKRLEEQLEH 251 +++ K DGS V ++ DK +L ++ D T++K+ EE+L Sbjct: 349 KQRDVFQIDYQLKRKDGSPAWVTLSGQALDSADPPDLDKGVLWMMDDATKRKKAEEKLVR 408 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A D++T L NRR F+ + HL AQ S+L++D D FK++ND GH GD+VL Sbjct: 409 IAATDSLTKLNNRRHFFSLGHEELALHLHNAQPLSVLMLDIDHFKNVNDTLGHQAGDKVL 468 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA---KVSISGLP 368 ++ R D++ R GGEEF ++L TP A AE IR+++ + + LP Sbjct: 469 KIFSKICAVNLRSVDIIGRIGGEEFAVILTNTPRSQAQRTAERIRLAIETSPEFTKQSLP 528 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + TVSIG+A ++ E++D + R D LY+AK++GRNR+ Sbjct: 529 KITVSIGIATNQPPENLDAIICRADKNLYQAKSNGRNRI 567 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 16/215 (7%) Query: 49 PYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEG-- 106 + S+++ + L L E+ + +LR+ P ++ E Sbjct: 66 VFGYSAEETIGANLHKLFAPRPEGELEH-KTIGRFFDSYEATMLRRDGSKFPALVQEKEL 124 Query: 107 IEAPATLGLKASRSANYQRKKQGFYA-------RFFLTNSAPMLLIDPSRDGQIVDANLA 159 T+ + + + Q F + + LID SR I AN Sbjct: 125 RYQGETVQVIKFHDISKSKGIQERLKFALAELDTIFTNSMVGIALIDASR--IIRRANPR 182 Query: 160 ALNFYGY-NHETMCQKHTWEINMLGRRVMPI-MHEISHLPG-GHKPLNFVHKLADGSTRH 216 GY N + + E+ + +H I+ L G + K + S Sbjct: 183 FSETLGYGNPQNIVGMDIKELYFCEKEFEAFGIHYITTLKENGIVHTDAKFKCKNSSPIW 242 Query: 217 VQTYAGPIEIYG-DKLMLCIVHDITEQKRLEEQLE 250 + I+ ++ ++ I DITEQ+ +++L+ Sbjct: 243 ARVVGKAIDQNDLNRGIIWIAEDITEQRTTQKELQ 277 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 7/145 (4%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 +G K ++ +K PM + D R + ++AN L+ +GY+ E Sbjct: 19 VGEKELKAPEANLQKNRLSL-LQEAAFEPMAIFDKER--KCLEANDILLDVFGYSAEETI 75 Query: 173 QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 + ++ I + DGS + G+ + Sbjct: 76 GANLHKLFAPRPEGELEHKTIGRFFDSY---EATMLRRDGSKFPALVQEKELRYQGETVQ 132 Query: 233 LCIVHDITEQKRLEEQLEH-AAHHD 256 + HDI++ K ++E+L+ A D Sbjct: 133 VIKFHDISKSKGIQERLKFALAELD 157 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 8/305 (2%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + + A + Q + RF S L+I + D ++ +N AA + + ++ Sbjct: 437 SMQDITAIKQLQQQLSEDEQRFRFLAEESPVPLVITRTSDAALLFSNKAADSLFRGSYAE 496 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 + + ++ + G + + + DG+ + D Sbjct: 497 HAGQSMRPLWGDSVDRDQLLARLQREGGIVRGVEAQFRRFDGTEVWLLLSVTRGRYRDDD 556 Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 ++ DITE K E +L + A+ D +TG+ NRR F + + +L + Sbjct: 557 ALIFAFKDITEAKARESELRNLAYTDTLTGIPNRRYFLARAALELRRAQREGSPFVVLAL 616 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D DRFK IND +GH GD V+ A+T R DL R GG+EF +LLP+T A Sbjct: 617 DIDRFKQINDRFGHQVGDAVIRCFAQTCMQQLRGPDLCGRLGGDEFAILLPQTTRQVAFD 676 Query: 351 LAETIRVSVAKV-----SISGLPRFTVSIGVAHHEGNESI---DELFKRVDDALYRAKND 402 +A+ +R+S+ + S T SIG+A ++ DEL R D ALYRAK Sbjct: 677 VAQRLRLSIQEASCLPSSAPDGLTLTTSIGIAEFLPTSTLMDADELLDRADQALYRAKQA 736 Query: 403 GRNRV 407 GRNRV Sbjct: 737 GRNRV 741 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 13/168 (7%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG-----FYARFFLTNSAPMLLIDPSR 149 L V + + + ATL K +R + Q + L N+ P + Sbjct: 288 LANERTVALKQVRDINATLEKKVNRRTAALQISQATTQAQLRFQESLLNALPNPVAFSDP 347 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEI--NMLGRRVMPIMHEISHLPGG-HKPLNFV 206 G+ N+A G + + + +I LGR + E+ L G Sbjct: 348 QGRFTRVNVAFNLLVGLSGPEIHGRTGTQILGTTLGRIWEDMDSEL--LSGSLQVTREAP 405 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLMLCIV---HDITEQKRLEEQLEH 251 + D + + ++ +V DIT K+L++QL Sbjct: 406 YLHPDHEPTVWILNKALVRDAVSRQIVGVVTSMQDITAIKQLQQQLSE 453 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 8/297 (2%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + ++ + F N+ P++ ID R+G I DAN + G + + + + Sbjct: 321 ARELLKQANNYNRSLFEINTDPIMAID--REGVITDANKSTETITGLSRTELIGRKFSSL 378 Query: 180 NMLGRRVMPIMHE-ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 ++ + + + + + L F + + E + D Sbjct: 379 FTNDQKADQGLQDTLLYSSIKNHELEFTNINGKNTHAIFNFSVFKDETGISTGIFAAARD 438 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ITE+K +EE+L+ A D++TGL NR+ F + + S+ L D D FK + Sbjct: 439 ITERKIMEERLKEMATTDSLTGLNNRQHFLEHSSILFEMAKRHKANLSIALFDIDHFKQV 498 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND +GH GD VL L++ +C R D++ R GGEEF +++P T + A+ +E R Sbjct: 499 NDTWGHEAGDLVLRELSKLALNCFRSSDIIGRIGGEEFAVIMPETDKEEAILASERFRKI 558 Query: 359 VAKVSIS---GLPRFTVSIGVAHHEG--NESIDELFKRVDDALYRAKNDGRNRVLAA 410 V L TVSIG+A N +I++L K DDALY AK +GRN V A Sbjct: 559 VESTRFEYENDLLSITVSIGIAQFNPNTNTTINDLTKISDDALYTAKANGRNMVFCA 615 >UniRef50_C8X2Z9 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2Z9_DESRD Length = 581 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 133/303 (43%), Gaps = 13/303 (4%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L ++A Y +Q R L ++ P ++ D + + N A FYG Sbjct: 285 ASGVLAANLHKAAEYASSEQ---RRTLLLDALPAMISYVDSDLRYQEVNAAYERFYGLGT 341 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 E + + +I + + L G G R Q P + + Sbjct: 342 ERILGRKIEDILDPEIFSNFRPYWDAVLRGETVSYEREIVTPAGERRIFQGDYHPHQDHQ 401 Query: 229 DKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 ++ IV D+T++ H A D +TGL NRR+ Q +D S Sbjct: 402 GEVFGFYAIVRDVTDR--------HQAQTDYLTGLPNRRRLERDGFLQLTQAHRYDKDLS 453 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 ++ID D FK ND +GH GDE L A+A L S +R D+ RWGGEEF LLLP T LD Sbjct: 454 FMMIDLDDFKSFNDQFGHLYGDEALKAVAELLRSASRDADIPARWGGEEFALLLPETDLD 513 Query: 347 TALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 A +AE +R VA + T S+GVA + + L R D ALYRAK GRN+ Sbjct: 514 GAREVAERLRARVATLDFGMGRFVTASLGVAQARAEDDLSALQDRADQALYRAKMAGRNQ 573 Query: 407 VLA 409 V A Sbjct: 574 VAA 576 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 13/139 (9%) Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP-GGHKPLNFVHKLAD 211 IV N A G++ E + + + + L G V D Sbjct: 41 IVYVNPAWERLTGFSAEAVVGSTPHILYGRETSANALDDLRASLKEDGTAQSETVIYRRD 100 Query: 212 GSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL---EEQLEHAAHHDAMTGLLNRRQ 266 G+ ++ P+ + GD + L + D+T + LE A+T L R Sbjct: 101 GTRLNMAVSISPLCLCGDGVDHYLALQWDVTAHRETCARNRDLE------ALTRLQ-RAV 153 Query: 267 FYHITEPGQMQHLAIAQDY 285 ++ Sbjct: 154 IMENLNIDSLRQRVANGAL 172 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 13/343 (3%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEA-------PATLGLKASRSANYQRKK 127 + K ++ + L E I+F + L + Q + Sbjct: 307 WYLVAKIDKKEVMAPLFRIATIEAVTAIMFLAAASIMMMLWWRRQQALYQASYYQQQLQH 366 Query: 128 QGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 Q RF LT A L++ GQI+DAN AL+ YGY + + ++ L ++ Sbjct: 367 QMLSQRFDNLTRFANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDLSQQE 426 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 + E + G + + DGST V+ A I++ L+ I+ DI+E+K E Sbjct: 427 CDLFWEQLKVEQGVR-FETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISERKAAE 485 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 +QL H A+HD +TGL NR + + LLL+D DRFK+IND GH+ Sbjct: 486 DQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAV 545 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSIS 365 GD +L LA+ ++ R D V R+GG+EF++LL L +SLA+ + V++ + Sbjct: 546 GDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLI 605 Query: 366 GLPR--FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 T S+G++ + +D+L + D A+YRAK GRN Sbjct: 606 DGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRN 648 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 10/310 (3%) Query: 108 EAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN 167 + A+ + +Q L +P ++ D + V N + + F+ Sbjct: 322 DLRQVNSAMANEVGQRRLAEQRLRQFERLVELSPDMVSLLDSDYRYVMVNDSYVRFFDKP 381 Query: 168 HETMCQKHTWEI---NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 E + +E+ ++ R ++ S G L R P+ Sbjct: 382 KEYFLGRPVYEVTGKDVFDDRSKKLID--SAFAGQTTGFEAWVDLPLVGKRFFSVTYHPV 439 Query: 225 E--IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 + + +L+ HDITEQK + E+++ A D +TG NRR F E + Sbjct: 440 DSVVGDGRLVSITAHDITEQKEMLEEVKRLASTDYLTGAHNRRHFMSRAETELDRLTRYG 499 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 + L+++D D FK+IND YGHS GD VL + + R D+ R GGEEF LL Sbjct: 500 GELYLMMLDIDHFKNINDTYGHSVGDVVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVH 559 Query: 343 TPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRA 399 +D+A+ +AE +R ++ + + + + TVSIG+ +E I+ K D LY+A Sbjct: 560 GSIDSAIQVAERLREAIEDMEVRIGRHVVKLTVSIGLTMVCADEDIEIALKHADKCLYQA 619 Query: 400 KNDGRNRVLA 409 K GRNRV++ Sbjct: 620 KEQGRNRVVS 629 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 4/120 (3%) Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 S+P +++ + +G ++ N A +GY E + +M+ +S Sbjct: 23 ASSPDVIVITNEEGIVLAGNSRAAEMFGYVDEATIPLSVNDNYKYPEDRERLMNLLSSGE 82 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL---EEQLEHAAH 254 K DG++ +++ G ++ + IV DI+E+K+ E + E A Sbjct: 83 -VVKDFEAEVLDRDGNSIFTSISVSAMDVGGMRVFVAIVRDISERKKTQLNEIRFETLAT 141 >UniRef50_B6BH53 Sensory box/ggdef family protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BH53_9PROT Length = 335 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 11/315 (3%) Query: 100 PVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 + F L L R + Q + + +L+ + G+I D + A Sbjct: 25 ELHWFTLTALSFILFLVLYRYKIIDKYSQNLQKNINIID-EHVLISHSDKHGKITDVSEA 83 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHV 217 F GY E + K+ ++ + E+ G ++ DGS + Sbjct: 84 LCRFTGYKKEELIGKN-HKVFKHPDTPKEVFTELWDTITRGETFKGEIKNRSKDGSEYWI 142 Query: 218 QTYAGPI--EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + P+ + + I DIT++K + + D +T NR +I Sbjct: 143 EATITPLINKKGDVEGYTAIRQDITDKKCAQ----KLSITDKLTQTYNRLHLENIFAQET 198 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 + YS++++D D FK IND YGH GD+VL + + L+S R D++ RWGGEE Sbjct: 199 HKAKRYGDTYSIIIMDIDFFKPINDNYGHDVGDQVLIDIVQVLKSHIRDIDVLGRWGGEE 258 Query: 336 FVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDEL-FKRVDD 394 F+++ +T +D A ++AE +RV++ + + + T S GV+ ++ ++S ++ KR DD Sbjct: 259 FLIICTKTNIDQAYTVAEKLRVAIERYEFDVIGKITGSFGVSEYKQSDSNSDVAVKRADD 318 Query: 395 ALYRAKNDGRNRVLA 409 ALY +K+ GRN V + Sbjct: 319 ALYTSKDAGRNLVTS 333 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 7/317 (2%) Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 ++ + + P + A A + ++ P+ ++ G++ AN Sbjct: 446 GRIVESDAQDRPLRMTGTALDIAKRKTVEEKLRTLTLAVAQNPVPILITDEVGRLEYANP 505 Query: 159 AALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHV 217 A L + + I H GH + G Sbjct: 506 AYLELTELTTNEVRAGLEAKAGPHFIDGSFIRHFHQVLFSKGHWQGELQNVTKSGRVFWE 565 Query: 218 QTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 T P++ ++ + + ++T QK+ E +L A D++TG+ NRR F+ + Sbjct: 566 FTSISPLQNEKGEVTHYVAVRKEVTAQKQAESKLRELATRDSLTGVWNRRYFFELAAREL 625 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 SL+L D D FK IND YGH GDEVL L + + + R DL+ R GGEE Sbjct: 626 ESAQRYKHPLSLILYDIDHFKRINDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEE 685 Query: 336 FVLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNES-IDELFKR 391 F +LLP T L+ A ++A I V + I +G + T+SIG++ ++ ++ L Sbjct: 686 FAVLLPHTYLEQAHTVARRILRGVNEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHD 745 Query: 392 VDDALYRAKNDGRNRVL 408 D ALY AKN GRN + Sbjct: 746 ADQALYAAKNKGRNSIC 762 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 91/320 (28%), Positives = 138/320 (43%), Gaps = 14/320 (4%) Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYA-----RFFLTNSAPMLLIDPSRDGQIVDAN 157 +F G + L + +R + L +AP+ + + DG I N Sbjct: 353 LFTGRDEYGALNRHLNELVTARRDAEAALRDAERQHRELVENAPIGIFRTAWDGTINVLN 412 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE--ISHLPGGHKPLNFVHK--LADGS 213 G+ + + + +++ P+ + + L G + G Sbjct: 413 QHGAALLGF-RDVAHARAVLDDSVIPLYAEPMDRQAMLDDLTAGEVVTGLRLRWYRRGGE 471 Query: 214 TRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP 273 V YA + D+T+Q +LE A D +TG+ NRR F E Sbjct: 472 AIWVSLYARRTGTPEAPEVESFFLDVTDQVEDTLRLEQLATTDELTGVANRRHFMARLED 531 Query: 274 GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGG 333 + + S+LL+D D FK IND +GH GD VL + + R+ DL+ R GG Sbjct: 532 EAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGDMVLRHITDVMGLSLRENDLIGRLGG 591 Query: 334 EEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL---PRFTVSIGVAHHEG-NESIDELF 389 EEF +LLP T + AL AE IR +V ++ TVS+G A + G N+S+D+L Sbjct: 592 EEFGVLLPETAQERALRTAERIRAAVEDAPVAVRDVWVGCTVSVGAAEYRGANDSLDDLI 651 Query: 390 KRVDDALYRAKNDGRNRVLA 409 +R D L RAK +GRNRV A Sbjct: 652 RRADHMLMRAKEEGRNRVCA 671 >UniRef50_B1KMS8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KMS8_SHEWM Length = 482 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 93/380 (24%), Positives = 160/380 (42%), Gaps = 12/380 (3%) Query: 41 TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEP 100 L + SS L + + + QH +I+ + K E LSC + Sbjct: 90 FNPPLVSKEDEHSSISSLHFFKNSIPLQHFLIDYKQIGSKSGELELSCDSFTYHVEAKLT 149 Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-----LTNSAPMLLIDPSRDGQIVD 155 + + + Q ++ R L N+AP ++ ++V Sbjct: 150 SVSKQRWLLVIRDISLRRKLIEMQTERMDQIKRTQKQLQGLINAAPTGILITDESKKLVM 209 Query: 156 ANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH----KPLNFVHKLAD 211 N + + ++ R+ + H+ ++ L Sbjct: 210 VNEFICQKLSLTTDELLGRNPLTFIAKKYRLEYLSEIQKHISYDDTILDSRMDLTMTLPS 269 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 T V+ + KL++ + DITE+KRLE QL A D +TG NRR F ++ Sbjct: 270 NETIKVEMAFSTLIFEKKKLVITAITDITERKRLETQLRILASTDPLTGAYNRRCFNELS 329 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 + Q++++LLID D FK IND +GH+ GD+VL + + +C R+ D++ R+ Sbjct: 330 QKSMSSTERQEQEFTILLIDLDFFKSINDKFGHAAGDDVLIETVKAINTCIRESDILGRY 389 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR---FTVSIGVAHHEGNESIDEL 388 GGEEFV+ LP + A +A IR+ + + + T SIG+A G +++ Sbjct: 390 GGEEFVVALPNSDNKKAREVANRIRLCIENMVVKTQGHDIKLTASIGLATSSGGHQLEKQ 449 Query: 389 FKRVDDALYRAKNDGRNRVL 408 + D LY AK++GRN+V+ Sbjct: 450 INQADTYLYYAKDNGRNQVV 469 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 67/164 (40%), Positives = 95/164 (57%) Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 E+ + + D +TGL N+ +F + + + + SL++ D D FK IND YGH Sbjct: 299 EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKV 358 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GDEVL ALA+ ++ RK D RWGGEEFV+L P T ++ A LAE +R +V Sbjct: 359 GDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPT 418 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + T+S+GVA E +E ++ R D ALY+AK GRNRV A Sbjct: 419 VGKVTISLGVAQLEPDEKPEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 16/359 (4%) Query: 65 LQNQHDIIEILTVQRKEEE-TALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L +IE+ R +E + CR + E + G T S + Sbjct: 513 LVGHSPMIEVEYRVRDDERWRWVQCRGRVMDRDEQNRPVRALGTHLDVTQRKL---SESE 569 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIV--DANLAALNFYGYNHETMCQKHTWEINM 181 +R Q + + + + DG AN A G + + + + Sbjct: 570 RRATQRKLEKLTAQLPSVVFQLRRRADGLYAMPYANPALGTLCGVDPLAVRDQADAFFAV 629 Query: 182 L---GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVH 237 + R E S + F G R + +A P ++ G L ++ Sbjct: 630 IVSADREECLASLEHSSCHLQSWRMEFRIVNPLGEIRWMLGHASPEKDLDGSVLWHGYLN 689 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI--AQDYSLLLIDTDRF 295 DI+E+K E+ L A D +TGL NRR + + D +++++D D F Sbjct: 690 DISERKAHEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDIDHF 749 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND +GH+ GD+VL LAR +++ R+ D + R GGEEF +LLP+T D A AE + Sbjct: 750 KRVNDSHGHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFAERL 809 Query: 356 RVSVAKVSI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLAA 410 +A V +G T+S+GV+ + ++ S+D R D ALY AK+ GRNRV AA Sbjct: 810 CRKIAGVPFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNRVEAA 868 >UniRef50_C0GLD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLD1_9DELT Length = 915 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 95/351 (27%), Positives = 146/351 (41%), Gaps = 19/351 (5%) Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK--------ASRSANYQRKK 127 T+Q E R+ +++ T + E A L R + + Sbjct: 562 TLQAMEGLKVPPHRIQVQQRAMTVDGWRWIFWEDNAVLDEHGHIVEIQGVGRDITELKSR 621 Query: 128 QGFYARFFLTNSAPMLLID---PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 Q F + ++ P I++ + A N +GY+ E + K ++ Sbjct: 622 QVLLQSIFQASQDVSFVVTQNMPHSGDIILEFSPGAENLFGYSREEVLGKPVAMLHDPAD 681 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 + DGST P E G L + DI+E ++ Sbjct: 682 IPRFPDIHRTLKENQPWRDKVNLVRRDGSTFPSLFTVYPFEYDGKDSTLGVSIDISELEQ 741 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 + LE A D +TGL+NR +F + E + S+L++D D FK ND YGH Sbjct: 742 ARKILEKTAITDHLTGLMNRSRFDQLMEEEWRRAKRGGHCLSILMLDIDNFKQFNDFYGH 801 Query: 305 SKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 +GD L +A L +C R GD++ R+GGEEF+ LLP TPL +A+ +AE +R+SV + Sbjct: 802 IQGDRCLQRIAGILSACLMRAGDVLARYGGEEFIALLPDTPLQSAVVVAEKMRMSVENLG 861 Query: 364 ISGLPR-----FTVSIGVAH--HEGNESIDELFKRVDDALYRAKNDGRNRV 407 + +VS GVA S L + D LY+AK+ GRN V Sbjct: 862 MPNTGSQAGPFVSVSAGVASSCPFPGMSRQGLIHQADMMLYKAKSLGRNTV 912 Score = 62.5 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 49/159 (30%), Gaps = 13/159 (8%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 F + T + ++ + + Y + + L++ D ++ N Sbjct: 483 FAAVFIDITSQKQMEQALG---ESERRYRGLVESQN--DLIVRVDTDNRLTYVNDTYCRT 537 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYA 221 +G E + K + + + + + L + + DG R + Sbjct: 538 FGRTREELMGKSFTPL-VHQDDIQATLQAMEGLKVPPHRIQVQQRAMTVDG-WRWIFWED 595 Query: 222 GPIEIYGDKL--MLCIVHDITEQKRLEEQLE--HAAHHD 256 + + + + DITE K + L+ A D Sbjct: 596 NAVLDEHGHIVEIQGVGRDITELKSRQVLLQSIFQASQD 634 Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 15/185 (8%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 +E V+ E ++ R L T + +G+ T L+ R + + + Sbjct: 324 LEYRIVRPDGEIRWINDRHWLILDPSTGTPVRVDGLTVDITQRLQIRRQLA---ESEEKF 380 Query: 132 ARFFLTNSAPM----LLIDPS---RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 L + ++++P D +D N A G + + ++ + G Sbjct: 381 RSLTLNAPVGIAMHEIVLNPHGDPVDYIFLDVNPAFETQTGLKPSEVLGRRASQV-LPGI 439 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 I+ + P++F + R +A I + + DIT QK+ Sbjct: 440 ENTSILSFFGQVVSSGDPMDFEF-YSSPLQRFYMVHAYKI---SHRRFAAVFIDITSQKQ 495 Query: 245 LEEQL 249 +E+ L Sbjct: 496 MEQAL 500 Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 17/154 (11%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 L+ ++A ++Q L N + D I+ + + +GY+ Sbjct: 228 EETRQELELRKAAQEFAREQQEKMESILNNMDDGVWSASWPDMDILFISPSLSGIFGYST 287 Query: 169 ETMC-QKHTWEINMLGRRVMPIMHEISHLPG-GHKPLNFVHKLADGSTRHVQ-------- 218 + + W + + + LP K L + DG R + Sbjct: 288 AELQKNNNLWFQAIHSEDRHIVEKSLLDLPREKRKSLEYRIVRPDGEIRWINDRHWLILD 347 Query: 219 -TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + P+ + G + DIT++ ++ QL Sbjct: 348 PSTGTPVRVDG------LTVDITQRLQIRRQLAE 375 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 10/284 (3%) Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 ++ F + +++ D ++ +I+ N A GY+ E K + GR Sbjct: 914 ELASKVFEQSREGIMITDSNQ--KILMVNEAFSEISGYSVEETLGKTPRML-ASGRHSRE 970 Query: 189 IMHEISH--LPGGHKPLNFVHKLADGSTR--HVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 + GH ++ +G + G + I +DI++ K Sbjct: 971 FYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKE 1030 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 EE+++H AH+D +TGL+NR +LL ID D FK++ND GH Sbjct: 1031 SEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGH 1090 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD++L + + + R D + R GG+EF+++LP T + A+ +AE I S++ Sbjct: 1091 QVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGENGAVHVAEKILESISDQLN 1150 Query: 365 SGLPR--FTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + T SIG+A + + + D L K D A+Y+AKNDGRN Sbjct: 1151 LKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRN 1194 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L ++ P L+ +G + N + F+G + K + + + + + E Sbjct: 483 LVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKT--DYDFVDKALADFFRENDC 540 Query: 196 ----LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQL 249 + ++ +G T P++ +++ + + DI+++K E QL Sbjct: 541 NAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKEDEAQL 600 Query: 250 EHAAHHDAMTGLL 262 E +T L Sbjct: 601 ER------LTKLY 607 Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 8/145 (5%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 L+ + + + +F+ M ++D D I N Y+ + + Q Sbjct: 335 DLQVLERYAEKTEAEKVLQKFYELPFIGMAILDAQHDKWI-RFNDRLPKILRYSSQDLAQ 393 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL---ADGSTRHVQTYAGPIEIYGDK 230 K EI + + + + +++ + G +D S + + Sbjct: 394 KSFNEI-IHPKDLAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGR 452 Query: 231 L--MLCIVHDITEQKRLEE-QLEHA 252 + L V D+TE K L E +EH Sbjct: 453 VQYYLMTVQDVTELKHLAELNIEHQ 477 Score = 41.0 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 8/144 (5%) Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLL----IDPSRDGQIVDANLAALNFYGYNHETMCQ 173 R +++ + + P ++ + P A+ A Y E + + Sbjct: 774 ERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTE 833 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGH---KPLNFVHKLADGSTRHVQTYAGPI-EIYGD 229 + ++ + + + H + + + R + A P + G Sbjct: 834 DSSKVFEVIHPEDVDDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGS 893 Query: 230 KLMLCIVHDITEQKRLEEQLEHAA 253 L + DI++ K+ E Q+E A+ Sbjct: 894 ILWHGFITDISQHKKTEAQIELAS 917 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 11/292 (3%) Query: 125 RKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 R+++ F + +P+ +I G I N GY K I G Sbjct: 138 REQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPH-ILKSG 196 Query: 184 RRVMPIMHEISHLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 ++ + GG F ++ +G PI +++ + DI Sbjct: 197 ETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDI 256 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 TE+K+ EE ++ A++D +TGL NR F + Q + ++L +D DRFKHIN Sbjct: 257 TERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHIN 316 Query: 300 DLYGHSKGDEVLCALARTLESCARKG-DLVFRWGGEEFVLLLPRT-PLDTALSLAETIRV 357 D GH+ GD++L A A L+ C R+ D V R GG+EF++LLP + A+ +A+ I Sbjct: 317 DTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIID 376 Query: 358 SVAKVSISGLPRFTVS--IGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + +V + +S IG++ + L K D A+YRAK GR+R Sbjct: 377 AFTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSR 428 >UniRef50_A4B9R1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4B9R1_9GAMM Length = 650 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 95/392 (24%), Positives = 156/392 (39%), Gaps = 12/392 (3%) Query: 22 FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKE 81 +E ++I A + + + + + +L +L+ ++E Sbjct: 266 YEAEVISQMVAKNFVALGTLYPERFERIAEIYKRLKLAPENVELEGL--VLEGYLNNESR 323 Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 + + L++ + +I+ L R + R Sbjct: 324 NQAFVRWALLVTLILAAGVLILM---MINRKLQQTIQRRTEQLDQLNQQLGRQVELTDRY 380 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK 201 ++ + R + + A GY E T ++ + L G Sbjct: 381 VIFAEVDRFHRFTKVSDAFCQASGYRREQFLAMKTEDLVSAEQLDGHFRVVEDVLLGVPW 440 Query: 202 PLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMT 259 ++ ADG VQ Y P++ ++ +DIT QK +E + D +T Sbjct: 441 QGEMTYRKADGGMFWVQMYVDPLKDDEGHVIGYTATANDITYQKEVE----RLSQTDPLT 496 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 GL NR + + Q +S++++D D FK IND YGH +GD VL A L Sbjct: 497 GLANRMKLDLELGREWARFYRYQQHFSIIIVDLDHFKTINDQYGHQEGDLVLKKAADVLS 556 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHH 379 S R D++ RWGGEEF++LLP+T DTA +AE +R + + P T S G A Sbjct: 557 SLLRTTDIIGRWGGEEFLILLPQTDADTAYLVAEKLRAGLPLIEGLRSPAPTGSFGTAST 616 Query: 380 EG-NESIDELFKRVDDALYRAKNDGRNRVLAA 410 S ++L + D ALY+AK GRNRV+ A Sbjct: 617 SVFTSSAEDLIRAADRALYQAKASGRNRVMVA 648 >UniRef50_A8FVJ0 Sensory box/GGDEF domain protein n=2 Tax=Shewanella RepID=A8FVJ0_SHESH Length = 422 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 93/375 (24%), Positives = 161/375 (42%), Gaps = 21/375 (5%) Query: 46 RTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTE---TEPVI 102 + S L ++L ++ + + IE+ ++ + + RL L+ + + + + Sbjct: 54 LNSILATSMANTLLRFLPEVFDTDEPIELEQ-AFEKGQKSKWWRLFLKPMAQPHGHQKRV 112 Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 + GI + L+ + R + A +I R I N AA Sbjct: 113 MITGINMDDKVALETEINKTGARYSS-------VVKGAFDAIITMDRYQTINYFNRAAEL 165 Query: 163 FYGYNHETMCQKHTWEINMLGRR------VMPIMHEISHLPGGHKPLNFVHKLADGSTRH 216 + Y+ E + K + + R V +EI + + G Sbjct: 166 IFEYSAEEIIGKPITSLMPVRHREHHSEYVEEFNNEIVSSRDMGERIQIYGLKKSGVEFA 225 Query: 217 VQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM 276 + I + G+ I+ D++++ +L ++L+ + D +TGL NR H Sbjct: 226 AEISISKILVEGETEFTAIIRDVSQRTQLLDELKFKLNTDYLTGLRNRNYLDHKLISMSN 285 Query: 277 QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 + +SLL+ID D FK IND YGH GD++L A + R+GD + R+GGEEF Sbjct: 286 RFKRYGFRFSLLMIDLDHFKQINDTYGHMVGDQILKCFADAATALLREGDKIARFGGEEF 345 Query: 337 VLLLPRTPLDTALSLAETIRVSVAKVSISG----LPRFTVSIGVAHHEGNESIDELFKRV 392 ++LP T L A A + +++ + G + FTVSIGV E + + + R Sbjct: 346 AVILPGTELYAAKLTATRLCKHISEQAFIGPDEKVIPFTVSIGVVEFEPEDDVKSIMNRA 405 Query: 393 DDALYRAKNDGRNRV 407 D+ALY+AK GRNR+ Sbjct: 406 DEALYKAKVGGRNRI 420 >UniRef50_Q486E7 Sensory box/GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q486E7_COLP3 Length = 428 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 13/309 (4%) Query: 111 ATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 ++ + +++ RF + N+A +I + N AA + +GY+ + Sbjct: 117 IQTCVEITEKKVLEKQLNLSMKRFEAVVNNAYDGIITIDEQQNVKLFNEAAQSMFGYSEQ 176 Query: 170 TMCQKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHK----LADGSTRHVQTYAGP 223 + + ++ + + +P+ DGS ++ Sbjct: 177 EIMGQPLTKLLPEKYQAKHHGYVEGFKRSQVDSRPMQTRAAVQGLRKDGSEFAIEVTISK 236 Query: 224 IEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 I I + ++ DI+E+ +L E+L ++ D +T L NRR F + + + Sbjct: 237 IRIADNVEFTAVIRDISEKNQLLEELILSSRRDPLTELYNRRYFTELLHSEITRSRRFKR 296 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT 343 +SLL++D D FK IND YGH+ GD L A ++ + + R+ D + RWGGEEF++LLP Sbjct: 297 GFSLLMLDIDHFKSINDRYGHACGDAALIAFSKAVTNSIREVDTICRWGGEEFLVLLPEI 356 Query: 344 PLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNESID--ELFKRVDDALYR 398 P TA+ +AE IR ++ + L + TVSIG+ + ++I+ + +VD LYR Sbjct: 357 PKVTAMVVAEKIRKNIENLETIYEGDLIKVTVSIGL-EYFSGDAIEMSSMINKVDQILYR 415 Query: 399 AKNDGRNRV 407 AK+ GRN++ Sbjct: 416 AKDTGRNKI 424 >UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IP8_THICR Length = 540 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 98/351 (27%), Positives = 150/351 (42%), Gaps = 23/351 (6%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 +QR +S ++L +I+F + A L K + + + Y Sbjct: 190 QLIQRVGLYETVSLGVILF-----FSLILFFTMRKKAGLVNKVLKMQKDAVEYKELYEAT 244 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + ++ + G I + N AL +GY E + + + G H + Sbjct: 245 LDSMVDACIIT--NEKGIIENFNQIALQRFGYTAEELMGQPIEILIPEGDHKRNHAHYME 302 Query: 195 ----HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL- 249 H K G + P++ D + I+HDI+++ +L EQL Sbjct: 303 SSSMHKKVLFKGRELKAITKHGELLSSEITVTPLKQSEDLKFVGIIHDISDRMKLMEQLG 362 Query: 250 ------EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 A D +TGLLNR+ F+ E + Q SLL+ID D FK IND +G Sbjct: 363 SLLNQLRDEATKDYLTGLLNRKAFFEQAEQIWLSAKEHHQPISLLMIDIDHFKRINDSFG 422 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GD VL +A R+ DLV R+GGEEF++LL L A ++ + ++S Sbjct: 423 HDAGDRVLIEVANVFSQNCREEDLVCRYGGEEFIILLENKDEQPTLEFASRLKKVIQEMS 482 Query: 364 ISGLP---RFTVSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNRVLA 409 +S RF++S+GVA E SI+ D ALY+AK +GRNRV Sbjct: 483 VSEQGEVIRFSISVGVATGSALELNSIETFISHADQALYQAKANGRNRVEV 533 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 9/291 (3%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 S R+ + + +LL++P G I+DAN A G++ + Sbjct: 308 ESLQQGRRSEERNRLVVERTNQAILLLEPGA-GTIIDANPATCVLLGFSRNELTGADIH- 365 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +L V + E+ + L+ H+ DG+ V+ A + D+ + + HD Sbjct: 366 -ALLSGPVQEVDSELERCLRETRELSLCHR--DGAELVVEAMATQVPHGDDQALCLMFHD 422 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT+++R +E+L H A HD +TGL NR Q +LL+ D D FK + Sbjct: 423 ITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVV 482 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRV 357 ND GH+ GD++L ++A + S R D R GG+EFV++L T +D A+++AE+ R Sbjct: 483 NDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESFRN 542 Query: 358 SVAKVSISG--LPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 +A G T S+G++ + ++++ L K+ D A+Y K GRN Sbjct: 543 LLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRN 593 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 16/296 (5%) Query: 129 GFYARFFLTNSA----PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 R +A P+ ++ + I+ N GY + + + T +I + Sbjct: 210 EERTRLREMQAAIEQSPVSVLIVDKQKNILYVNPQITKSTGYTRKELYGQKT-DIFRGDQ 268 Query: 185 RVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 ++ ++ + G +++ DGS P+ ++ + DIT Sbjct: 269 TPNNVLPDLWKIIKSGSTWKGELLYQRKDGSVFWQSWNIAPVLDNHGEIQHFAAVGEDIT 328 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ +L+ L+ ++ D +TG+ NRR+F + A+ +++++D D FK ND Sbjct: 329 EKMKLQSLLQEMSYMDGLTGIANRRRFDDFLTHEWYRAARYAKPLAIIMMDIDFFKRYND 388 Query: 301 LYGHSKGDEVLCALARTLESC-ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 GH GD+ L + L+S R+ DL+ R+GGEEF+ +LP T + A AET+R +V Sbjct: 389 SLGHLAGDDALKRVVHALKSRVLRRTDLLARYGGEEFICILPDTNVIDATLFAETLRQAV 448 Query: 360 AKVSISGLPR-----FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLA 409 + + T+S+GVA E L D+ALYRAK GRNRV Sbjct: 449 CALQLPHPDSNISSFVTISVGVACCTPREGEPSNLLGLADEALYRAKTLGRNRVEV 504 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 34/198 (17%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPML--LIDPSRDGQIVDANLAAL 161 + +E K +R+ +K+ + ++ + L+ +D I N AA Sbjct: 60 TQELEEALQTNTKITRALQQAKKQVELSEHYLRDITSALGEGLLVVDKDAVIEFVNAAAC 119 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMP--IMHEISHLPGGHKPLNFVHK-----LADGST 214 N GY+ M K++ E+ + E +L +V DG+ Sbjct: 120 NILGYSEIEMLGKNSHELFHHSHPDHTPYPIEECKNLSVIQTEQPYVSDEDYFWRKDGTC 179 Query: 215 RHVQTYAGPIEI-YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP 273 V PI + K ++ HDIT+ +L Sbjct: 180 FPVSLITTPIRLKENTKGIVIAFHDITQSVEERTRLREM--------------------- 218 Query: 274 GQMQHLAIAQDYSLLLID 291 Q S+L++D Sbjct: 219 ---QAAIEQSPVSVLIVD 233 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 88/384 (22%), Positives = 157/384 (40%), Gaps = 20/384 (5%) Query: 45 LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIF 104 ++ P + L + N+ E+ V + + L +L Sbjct: 76 IKENPITSEIPVIFISALDEAFNKVKAFEMGGVDYITKPFQIKEVLARVQLQLRLQHQTQ 135 Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + E L + + + + F F + ++ D I+ N A Sbjct: 136 QLKEQNQKLQQEINTRKELEIQLNLFNQAIFTCRNGVIITDATQSDNPIIYVNQAFEKIT 195 Query: 165 GYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAG 222 GY+ + K+ + R P + I + + + + DG+ + Sbjct: 196 GYSVSEVWGKNCRFLQGEDRDQ-PNLDIIRNALKNDEDCLVIIRNYRKDGTLFWNEVSIS 254 Query: 223 PIEIYGDKL--MLCIVHDITEQKRLE-------EQLEHAAHHDAMTGLLNRRQFYHITEP 273 P+ G + + I DITE+ R++ +L+H A+ D +T + NRR F E Sbjct: 255 PVRDAGGNITHYIGIQSDITERHRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQ 314 Query: 274 GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWG 332 + Q +L+L D D FK ND YGH +GDE L +A+ + R DLV R+G Sbjct: 315 EWKRCFREQQPIALILCDVDYFKAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYG 374 Query: 333 GEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-----FTVSIGVAHHEGN--ESI 385 GEEFV++LP T A +A+ I+ + ++ + T+S+G++ + S Sbjct: 375 GEEFVVILPNTDGSGARQVAQLIQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSP 434 Query: 386 DELFKRVDDALYRAKNDGRNRVLA 409 ++L D ALY+AK GR++++ Sbjct: 435 EQLVNAADSALYQAKQQGRDQIVV 458 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%) Query: 147 PSRDGQIVDANLAALNFYGYNHETMC-QKHTWEINMLGRRVM-PIMHEISHLPGGHKPL- 203 P + ++ + + GY E + + T ++ + E+ + Sbjct: 123 PDENWTMLFVSAGCADLTGYQPEELIRNRTTSYAALMDEEDAGQVAQEVEAAVRKDESFS 182 Query: 204 -NFVHKLADGSTRHV-QTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 + DG V + G ++ G ++ I+ DI+++K+LE +LE A D++TG+ Sbjct: 183 VEYAITRKDGRKIWVWERGCGVLDDDGTMVLEGIILDISDRKQLENELEALATRDSLTGV 242 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 LNRR+ + + + +LL ID D FK IND +GH+ GD VLC+++ LE Sbjct: 243 LNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDTWGHAAGDSVLCSISSLLEDS 302 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGVA 377 R D + R+GGEEFVL+LP + A AE +R V ++ R T+SIGVA Sbjct: 303 VRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCNQPVALESGHNIRLTISIGVA 362 Query: 378 HHEG-NESIDELFKRVDDALYRAKNDGRNRVLAA 410 +++D L D A+YRAK GRN + A Sbjct: 363 VFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMA 396 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 90/302 (29%), Positives = 139/302 (46%), Gaps = 8/302 (2%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG-YNHETMC 172 + + +R +G F P++L +G ++ N AA T Sbjct: 227 RQRLEKEMRERRTAEGNLRHLFEVCPVPLVLSQQD-NGSVLRFNRAAQALLDPERRHTEP 285 Query: 173 QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 R + + G P++ + G+ HV A + + Sbjct: 286 GSAYASNFYADARTRSAVTDALKTRGEAGPVDVRMLTSSGNHIHVMLAASSLRFDNKAAV 345 Query: 233 LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 L + +IT++K+ E+ L DA+TG NRR F+ +Q SLLLID Sbjct: 346 LTSLVEITDRKQREQALTRMTQTDALTGFYNRRGFFERAN-ALLQSARDQAP-SLLLIDA 403 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA 352 D FK +ND +GH+ GD VL LA + + R+GD++ R GGEEF + LP T L+ A LA Sbjct: 404 DHFKRVNDTHGHAVGDTVLVQLANRMNAALREGDVIGRIGGEEFAVFLPTTSLENAYELA 463 Query: 353 ETIRVSVAKVSISGLP---RFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVL 408 + IR+SV++ ++ T+SIGV + ES ++ R D A+Y+AK +GRNRV Sbjct: 464 DRIRLSVSRHALRIQGLRVPMTLSIGVTVLQPGESTLEAALGRADTAMYQAKQNGRNRVE 523 Query: 409 AA 410 A Sbjct: 524 LA 525 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 20/271 (7%) Query: 156 ANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-------LPGGHKPLNFVHK 208 N A +G + + + + + V P E + G H F + Sbjct: 1 MNPAFERIWGQSRDRL----YRDPRSMLEAVHPEDRERVERQFLNDPMKGAHVEDTFRLR 56 Query: 209 LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK-------RLEEQLEHAAHHDAMT 259 DG+ R + + + ++ + DIT+ K R +L+ A++D +T Sbjct: 57 RPDGAERWLHVHRYQVPDEDGRVSRVAGTAVDITDLKQVELELQRANAELKRQAYYDRLT 116 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 G+ NR F + + ++L++ D D FK +ND +GH+ GD VL + R + Sbjct: 117 GVANRHYFETLLNRELARADRYGAPFALVMFDLDHFKRVNDTFGHAAGDVVLQEVTRVIA 176 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHH 379 R D++ RWGGEEF++LLP T A +AET+R V R T+S+GVA Sbjct: 177 ERLRDADVLGRWGGEEFMVLLPGTQEADAARVAETMRARVEGHDFPEAGRVTISLGVAAF 236 Query: 380 EGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E L +RVD+ALYRAK +GRNRV A Sbjct: 237 CAGEPRTGLLRRVDEALYRAKGEGRNRVAVA 267 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 16/293 (5%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 ++ F ++ + +++ D G IV+ N A GY E + ++ + GR Sbjct: 169 DQRDLLETVFESSYSGVMITDAK--GNIVEVNPAFTRITGYQSEEVQGRNPH-LLASGRH 225 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITE 241 E+ L GH + +G P+ L+ + I D+T+ Sbjct: 226 DHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTK 285 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K E Q+ A +D +T L NRR + ++L +D D FK +ND Sbjct: 286 RKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDT 345 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL------PRTPLDTALSLAETI 355 GH GD++L +A+ L SC R GD V R GG+EFV++L P A +AE I Sbjct: 346 KGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKI 405 Query: 356 RVSVAKVS--ISGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 R ++++ + + R T SIGV G+ +S++E+ K D A+Y+AK GRN Sbjct: 406 RYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRN 458 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 4/273 (1%) Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 + + ++ DG AN GY+ + + ++I + V ++ ++ Sbjct: 340 QNTKIGVLVFDMDGVY-YANDYFFELLGYDFDELKALTIFDI-LSPIHVKDLIDAFANKM 397 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEI-YGDKLMLCIVHDITEQKRLEEQLEHAAHHD 256 F D V+ I + DIT++K L E L + D Sbjct: 398 -PILSQEFHVFKKDNKILFVKGTLDFIRNPENKDNAVFTFVDITKEKELSELLLKQSIED 456 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 +TG+ NRR E + S+++ D D FKHIND +GH GD+VL A+++ Sbjct: 457 TLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFDIDFFKHINDTFGHDVGDKVLIAISK 516 Query: 317 TLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGV 376 + R D+ R+GGEEF+++ P T + A LAE +R + + T S GV Sbjct: 517 VVSENIRNTDIFARYGGEEFIIVAPETTKEDAKILAEKLRSLIRNLHFEEGINVTCSFGV 576 Query: 377 AHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 E ++ + L KRVD+ALY AK GRNRV+ Sbjct: 577 VSLEKPDTKETLLKRVDNALYEAKRTGRNRVVV 609 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + + + FY FF +S PML +D IVDAN AAL FYGY E + W+I Sbjct: 84 ALHKLKDQNEFYKTFFEGHSIPMLFVDID-TYSIVDANKAALMFYGYTKEEITSLKNWDI 142 Query: 180 NMLGRRVMPIM-HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 N+LG M + H+ H F H+L G R V+ Y+ P+ + G +L I++D Sbjct: 143 NILGEEKMKELVHKAKHKELNF--FKFKHRLKSGEIRDVEVYSSPVRLNGKTYLLSIIND 200 Query: 239 ITEQKRLEEQLE 250 IT+++R LE Sbjct: 201 ITKEERTRRVLE 212 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 18/294 (6%) Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI--N 180 + ++ A+ F +S ++L+DP+ IV N A + GY+ E ++ + Sbjct: 488 EKEEQLQLSAQIFAQSSEGIMLLDPNC--HIVMVNSAFTHITGYSEEETLGRNPKMLASG 545 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 R M E G ++ DGS + L + D Sbjct: 546 QHDRNFYATMWEAIETEG-RWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTD 604 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +TE+K EE+++ AH D +TGL NR + + + +L+ +D D FK++ Sbjct: 605 LTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNV 664 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI--- 355 ND GH GDE+L ++ L + R+ D + R GG+EFVL+LP T D A LAE + Sbjct: 665 NDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNI 724 Query: 356 --RV-SVAKVSISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 R ++ + I TVSIG+A + D L++ D A+YRAK GRN Sbjct: 725 AARQYNIERHEI----NLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRN 774 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 4/116 (3%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI-NMLGRRVMPIMHEISHLPGGH 200 M ++ S D I N +GY E +K E+ + + + Sbjct: 1 MGILSVSLDKWI-HFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRGIESLKRGDIDE 59 Query: 201 KPLNFVHKLADG--STRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 + +G + V + ++ V DITE+K+ + ++ + Sbjct: 60 FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQ 115 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 134/298 (44%), Gaps = 9/298 (3%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 + + R + Y + F T+ + + DG VD N G+ H+ + Sbjct: 472 ERERKIMQDDLRDSEERYRKAFQTSPDAVNITRL-VDGLYVDVNTGFERITGWRHDEVVG 530 Query: 174 KHTWEINMLG---RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 K E+N+ G R+ + S + FV +G H A + Sbjct: 531 KTATELNLWGNPADRMRLVDALQSEGRCNNLEATFV--KKNGDIFHGLMSAEKVRFKDVD 588 Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 +L I DITE+K E Q++ AH D +TGL NR Q + +++ + Sbjct: 589 CILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFL 648 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK+IND GHS GD++L ++R L++ R+ D + R GG+EF+LLLP T A Sbjct: 649 DLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQASQ 708 Query: 351 LAETIRVSVAKV-SISGLPRF-TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 +A + +VA+ I TVSIG+A + + + L K D A+YR K RN Sbjct: 709 VATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRN 766 Score = 41.7 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 20/129 (15%) Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG--RRVMPIMHEISH 195 ++ P LL + DG+ + Y + K + + + +HE + Sbjct: 195 DALPDLLFETDMDGRYL--------AYHSPRSELLGKTLHRVLPVAVADICLAAVHEANA 246 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAG--PIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 + G L DG+ + A P + + DITE+K+ E ++E Sbjct: 247 V-GYSHGKQIQLALPDGAH-WFELSASRKPGLPGDAPTFIVLSRDITERKKAEIKIER-- 302 Query: 254 HHDAMTGLL 262 +T L Sbjct: 303 ----LTKLY 307 >UniRef50_A1VAH5 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfovibrio vulgaris RepID=A1VAH5_DESVV Length = 572 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 14/356 (3%) Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 L + +E T + + E LR + + V+ + + PA + + Sbjct: 207 RVLTALNAHLEGRTDRYEAEYRIHDGGDALRWVHDQGRVVRRDAVGVPARV-IGLFMDVT 265 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +R + AR F + + ++D +G+ + N A + G+ M + + Sbjct: 266 ARRYAEESRARLFELSLDMLCILDF--EGRFHEVNPAWNSTLGWMVSEMLETSLGGLTHE 323 Query: 183 GRRVMPIMHEISHLPGGHKP--LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + L G + L + +DG+ R + A P + + +V D+T Sbjct: 324 ADAT-AVAQALDQLAAGERVRGLEVRLRCSDGTWRWLSWSARP--EVEQRRIYAVVRDVT 380 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 QKR E +L A DA+TG+ NR F + S+L++D D FK +ND Sbjct: 381 HQKRQEVELRRMASMDALTGVSNRATFMETLADMMQRCCHDRAVASVLVMDVDNFKLVND 440 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 +GH+ GDEVL L R + R D V R GGEEF +LLP + A +AE +R ++A Sbjct: 441 TWGHAVGDEVLRRLGRAMVPLLRTVDTVGRLGGEEFGVLLPGVGPEAACCVAERLRAAIA 500 Query: 361 KVSIS------GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + R TVS+GVA S+ E+ + D ALYRAK GR+RV+ Sbjct: 501 AMEVPCDDGRGEALRVTVSVGVASCPPYHSVTEVLRAADKALYRAKASGRDRVVCG 556 Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 9/125 (7%) Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 + APML I+P G IV+AN AA FYG+ E +C +INML R + + + Sbjct: 34 HHPAPMLFIEP-ESGGIVEANRAACAFYGHPFERLCTMFIDDINMLQRDEI-LARRRAAA 91 Query: 197 PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE-------QKRLEEQL 249 G + H+LA G R + ++ P+ + +L+ +VHD+TE + EE+L Sbjct: 92 TGLANRFSMPHRLATGEVREMLVHSHPVMVGERQLLFSVVHDVTECSRMGEALRSREERL 151 Query: 250 EHAAH 254 E A Sbjct: 152 ELVAS 156 >UniRef50_C4XMB2 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMB2_DESMR Length = 519 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 89/310 (28%), Positives = 129/310 (41%), Gaps = 19/310 (6%) Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 R+ R++ Y F+ ++A ++ RDG++ N GY E + K Sbjct: 207 LERARRSLREQDAQYR--FIVDNALEGIVALDRDGRVTFLNRRMAEMVGYRVEEVLGKPY 264 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LC 234 + + + G DG + VQ A + Sbjct: 265 LDFLAEDQFADATAKQAERTQGLDGVYERCLLRKDGGRKWVQVSARAVLDAAGHYAGAFS 324 Query: 235 IVHDITEQKRLE-------EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 ++ DI +KR E ++L + D +TG+ NRR+F +H SL Sbjct: 325 VIIDIDARKRTETALTASNKRLAEQSLLDGLTGIANRRRFDEALAREYRRHARGGASLSL 384 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLD 346 +LID D FK ND YGH GD L +A L R GDLV R+GGEEF +L T Sbjct: 385 VLIDIDHFKAFNDRYGHLHGDACLRQVAGVLRQNVTRAGDLVARYGGEEFACILAETDAP 444 Query: 347 TALSLAETIRVSVAKVSISGLP-----RFTVSIGVAHHE--GNESIDELFKRVDDALYRA 399 +A ++AE +R +VA + I R T+S G A S EL R D+ LYRA Sbjct: 445 SAAAMAERLRQAVAALDIPHEASPTACRVTISCGAATVRCLPGGSPLELLARADEQLYRA 504 Query: 400 KNDGRNRVLA 409 K GR++ A Sbjct: 505 KAAGRDQAAA 514 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 84/323 (26%), Positives = 134/323 (41%), Gaps = 31/323 (9%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAP---MLLIDPSRDGQIVDANLAALNFYGYNHET 170 L + + K+ Y L+ + ++ +G I N A + GY E Sbjct: 245 ALMLGVVQDITQLKEAEYRLITLSQAVEQSGSTILITDLNGVIEFVNPAFTHVTGYTPEE 304 Query: 171 MCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 K T I G + + G +++ DG P+ Sbjct: 305 AVGKSTS-ILKSGMHPPEFYKNLWDTIISGDTWKGQIINRKKDGELYWESATISPVMGKD 363 Query: 229 DKLML--CIVHDITEQKRLE--------------EQLEHAAHHDAMTGLLNRRQFYHITE 272 + + DIT +K+ E ++L+ D +T + NRR+F + Sbjct: 364 GNITHYSAVKEDITSRKKAEKLLKETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLD 423 Query: 273 PGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTL-ESCARKGDLVFRW 331 + SLL+ D D FKH ND YGH GD+ L +A+ + ++ R DLV R+ Sbjct: 424 QEWQRCKRAKVWLSLLMCDIDYFKHYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARY 483 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP-----RFTVSIGVAHHEGNE--- 383 GGEEF ++L T L+ A +A I+ V ++I+ T+SIG+ ++ Sbjct: 484 GGEEFAVILSDTGLNGACHVARRIQEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDL 543 Query: 384 SIDELFKRVDDALYRAKNDGRNR 406 S+D L K D+ALY+AK GRNR Sbjct: 544 SMDLLIKTADEALYKAKRKGRNR 566 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 13/299 (4%) Query: 123 YQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAA---------LNFYGYNHETMC 172 Y +++ F RFF ++ S +I+ AN L + + +C Sbjct: 317 YFKRQAEFEKRFFFEVFDTSTEIVYVSNQRRILFANKRFFEFFNEFETLEDFHEKYHCIC 376 Query: 173 QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI-YGDKL 231 + E L R + + + +H+ ++ +G A I YGD+ Sbjct: 377 ELFMPEEGFLRRHINGV-YWFNHVIQNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQY 435 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + ++ DITE++ + QLEH HD +TG+ NR F E +H +S+ +D Sbjct: 436 VSVLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMD 495 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND YGH GD VL +LA+ + S R D+ R GGEEFV+++P T L+ AL + Sbjct: 496 IDHFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALII 555 Query: 352 AETIRVSVAKVSISGLP-RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +E IR +V +S +P + T+S+G+ +++ +KR D+ALY+AK +GRNR+ Sbjct: 556 SERIRSTVEGISSKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNRIET 614 >UniRef50_Q47FH1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FH1_DECAR Length = 820 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 97/429 (22%), Positives = 166/429 (38%), Gaps = 43/429 (10%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLT-FSQLRTGPYSVSSQKELPKYLSDL--QNQHDII 72 +W +P ++ + + +D+ F + R S+ S + + + + Sbjct: 396 IWQWNPKSHEINVSEEIRHIYGRDVPPFPEQRGTLLSIESWERVNAAAQEAIKTGIGYDL 455 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 ++ + + + R + E ++ G T ++ ++ R + + Sbjct: 456 KLQAYRNDGSQIWIHARCEAIRDAE-GDILALRGTVQDITERIEGEKAL---RNSEIRFR 511 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 F + M S DG+ + N GY+ ET+ EI + + Sbjct: 512 ATFEQAAVGMA--HVSLDGKWLHVNDKTCEIVGYSRETLLGLTFQEITYPPDLNTDLDNL 569 Query: 193 ISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLE-- 246 L G + + D + V + + + ++ DI +K E Sbjct: 570 QKLLAGSISSYSMEKRYVRRDATLTWVNLTVALVRTSEGQPDYFVSVLEDIQSRKEAEAA 629 Query: 247 ---------------------------EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 ++LE AH DA+T L NR ++ Sbjct: 630 LDEARKVYRQHLEQQVAERTEALLMANQELERLAHQDALTKLPNRLAANERLRQEFLRLK 689 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 Y + ++D D FK IND YGH GD VL A TL R D V R+GGEEF+ L Sbjct: 690 RTGSPYCVFMMDIDHFKMINDTYGHETGDHVLEHFAVTLTGALRATDFVARFGGEEFIAL 749 Query: 340 LPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYR 398 +P T ++ A+ AE +R+++ + + TVSIGV + + + DE +R D ALYR Sbjct: 750 MPDTEIEGAMVAAEKVRIAIHQEKFPVVGCVTVSIGVGNSRTEDANEDETVRRADAALYR 809 Query: 399 AKNDGRNRV 407 +K DGRNRV Sbjct: 810 SKKDGRNRV 818 >UniRef50_C1F117 Sensory box-containing diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F117_ACIC5 Length = 627 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 142/314 (45%), Gaps = 21/314 (6%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + + + + + L S+P +++ G+ + + AA G++ + + K Sbjct: 298 ERRKLLKLAVENERRFRS--LAESSPDVMVLTDLAGRRLYVSSAAKTLLGWSPKELLGKT 355 Query: 176 TWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYA---GPIEIYGDK 230 + V + +S G + L + + DGS V+ ++ + Sbjct: 356 YQSNIVHSDDVPALEEALSDVRRTGEGRTLTYRCQHKDGSYLWVEASLMLYRDMQSHDPI 415 Query: 231 LMLCIVHDITEQKRLEE-------QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 + +V DIT +K EE +L+ A DA+TG+ NRR F + + + + Sbjct: 416 GFVNVVRDITSRKAAEERMQTAYLELQALAEIDALTGVANRRHFDKVLDAEWKRAIRTGA 475 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPR 342 +LLLID D FK+ ND+YGH +GD L ++A + C R DLV R+GGEEF L+LP Sbjct: 476 PTALLLIDVDWFKNYNDIYGHLEGDVCLRSIATWISVCIHRSTDLVARFGGEEFALILPD 535 Query: 343 TPLDTALSLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEG--NESIDELFKRVDDAL 396 T A +L E IR + + + T+S G A S L D AL Sbjct: 536 TDEAGAAALGERIREEIEARKVVHRGNEYGHITISAGCASLMPMRGTSGTLLIDAADKAL 595 Query: 397 YRAKNDGRNRVLAA 410 YRAK+ GRNRV+ A Sbjct: 596 YRAKSSGRNRVMRA 609 >UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E8F7_GEOLS Length = 461 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 11/304 (3%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLT-NSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 T+ R +R K+ + +P ++ +RDG I N A GY+ + Sbjct: 141 TMRASTLRDVTARRAKEAQLRKLSAAVEHSPASIVITNRDGAIEYVNPAFSRLTGYSMQE 200 Query: 171 MCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 ++ + G + E+ L G F +K DGS PI Sbjct: 201 ALGQNPRILKA-GDQPEEFYRELWAVLLRGEEWRGEFHNKRKDGSLFWEMASISPILNNK 259 Query: 229 DKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 +++ + + +ITE+K L ++LE A D +TGL NRR F Q ++ Sbjct: 260 GEIISFVAVKENITERKELRDRLEQMAQFDMLTGLPNRRMFLDRLSQTVAIAQRTEQRFA 319 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPL 345 LL +D D FK IND YGH GD VL +A L +C R D V R GG+EF ++L Sbjct: 320 LLFVDLDGFKRINDSYGHEAGDRVLKTVAARLAACIRMSDTVGRMGGDEFTIILSTLAHY 379 Query: 346 DTALSLAETIRVSVAK-VSISGLPRFTV--SIGVAHHEGN-ESIDELFKRVDDALYRAKN 401 + A +A+ I ++++ +++ + TV SIG++ + + D L DDA+Y+ K Sbjct: 380 EDAGQVADKILDALSRPITLPDGQQDTVGSSIGISVFPEDAQDGDGLLATADDAMYKVKR 439 Query: 402 DGRN 405 +G+N Sbjct: 440 NGKN 443 Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 5/127 (3%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + + ++L G I D+N A G++ + + ++ + ++ Sbjct: 43 SEEHFRNLAEASFEGIILSRNG--GVICDSNERASEMSGFSRQELLERSLY--CLIAPEY 98 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 ++H + G P ADGS ++ + G + + D+T ++ E Sbjct: 99 HTLVHR-AIADGFDGPYEIEGVRADGSRYLLEVRGKTFQSGGHTMRASTLRDVTARRAKE 157 Query: 247 EQLEHAA 253 QL + Sbjct: 158 AQLRKLS 164 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 81/326 (24%), Positives = 138/326 (42%), Gaps = 19/326 (5%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 L ++ + +E + + + RK + + ++++D ++ Sbjct: 280 LLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVDSTQ-- 337 Query: 152 QIVDANLAALNFYGYNHETMCQKHT------WEINMLGRRVMPIMHEISHLPGGHKPLNF 205 +I N A + GY E + K+ + + ++ + G Sbjct: 338 KIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEAQDYWQG-----EI 392 Query: 206 VHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 ++ +G I + I DITE+K+ EE++++ A+ D +T L N Sbjct: 393 WNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPN 452 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR F + Q +++ +D D FK IND GH GD+VL A + C R Sbjct: 453 RRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVR 512 Query: 324 KGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHH- 379 +GD V R GG+EF +LLP L+ LAE + V + + T SIG+A + Sbjct: 513 EGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYP 572 Query: 380 EGNESIDELFKRVDDALYRAKNDGRN 405 E +++ L K D A+YRAK+ GRN Sbjct: 573 EDGTTVEALIKNADTAMYRAKDLGRN 598 >UniRef50_Q8DCJ9 FOG: GGDEF domain n=3 Tax=Vibrio RepID=Q8DCJ9_VIBVU Length = 479 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 89/387 (22%), Positives = 169/387 (43%), Gaps = 19/387 (4%) Query: 35 LLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRK 94 LL D + P+ + + E +L + Q++ E + Q + E + R + Sbjct: 94 LLSHDTDTDCIFELPF-IKASSEFQAFLENYQSRGGRSEDIAFQLDDHEYRV--RANITA 150 Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 + +++ + I L + ++ + + L NSAP+ ++ I+ Sbjct: 151 VGNHRWLLVLQDIYLRKKLEEMQYQRLQQSKRAEKQLQQ--LVNSAPIGILICDPRLNIL 208 Query: 155 DANLAALNFYGYNHETMCQKHTWEI------NMLGRRVMPIMHEISHLPGGHKPLNFVHK 208 N +G + + + H + ++ R + ++E + + Sbjct: 209 MTNDFICQLFGMSEQDVLSHHPMDFISLRSRDLFQRYIQKTINEQD--SQEIARADLLLM 266 Query: 209 LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 L + ++ + G +++ + DI+E+K+LE L + A D +TG NRR F Sbjct: 267 LPEKKDIPIEMAFSRLVFEGKPMIIMSITDISERKKLEAMLRNLAATDPLTGAFNRRSFM 326 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 E S++++D D FK ND YGH+ GD VL L + + R+ D++ Sbjct: 327 EQAEKSIRTCQRWNCPLSIMILDIDHFKQFNDSYGHAAGDLVLVELVKMADLSTREIDII 386 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHEGNE-- 383 R GGEEF ++LP A +A+ +R V + ++ + T+SIGVA + +E Sbjct: 387 GRLGGEEFAVVLPGLGEKEAFEVAKRLRSVVENMQVNYEQQPLQMTISIGVATLQPSELN 446 Query: 384 -SIDELFKRVDDALYRAKNDGRNRVLA 409 +++L K+ D+ LY AK GRN V++ Sbjct: 447 TPLEQLMKQADEGLYYAKAHGRNCVIS 473 >UniRef50_Q2SLT6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLT6_HAHCH Length = 928 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 7/286 (2%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 Q Y + F A +++DP+ + +++DAN AA +F+G++ E M + + Sbjct: 368 ESSQRRYRQMFEHCDAVQIILDPT-NNKVIDANPAACDFFGFSSEMMGNISASRLFLSEN 426 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 M + + L G + + D + V+ Y I+ + IVHDIT++KR Sbjct: 427 NEMLGENWLPSLQSGKTVI--AARRGDNRSSLVEMYVSDIKDKASSYLYLIVHDITDRKR 484 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 EEQ+ A++D +T L NR + H ++L ID DRFK +ND GH Sbjct: 485 SEEQIRLQAYYDPLTRLPNRSYLFEHLNSLIASHKREQARLAVLFIDLDRFKQVNDNLGH 544 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVSVAKVS 363 GD++L ++ L+S R+ D++ R GG+EF ++LP + A+ +A+ + +A Sbjct: 545 GVGDKLLQQVSTRLKSRLRESDMLARLGGDEFTVVLPHLREETDAIHVAKMLLQQLADSF 604 Query: 364 ISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 G SIGV E L K D A+Y+AK++GRN+ Sbjct: 605 SVGDYELHIGASIGVTLFPKDGEDASTLIKNADIAMYKAKDNGRNQ 650 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 149/335 (44%), Gaps = 14/335 (4%) Query: 87 SCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLID 146 + +L V+ + + A + + R + F A P+ Sbjct: 129 ALEQQRVELLYQYEVLDAQATDL-ARIAEDTDAARTEARNAERFVADLLEAIPIPVFF-R 186 Query: 147 PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP---- 202 +G+ N +G + + + + E + I H L G +P Sbjct: 187 SRENGRYQMVNQRYAELHGRSRDDVVGRTPAEFLAPAI-LASIEHWDRALYDGDEPRQAY 245 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKL-MLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 + + G+ R V A + + + ++ D+TE RL ++LE A D +TGL Sbjct: 246 EDDMSFAGVGARRMVLHKAKMWDASNRLIGVTGVMVDVTESHRLRQELERLATTDPLTGL 305 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NRR F + + + S+++ID D FK +ND YGH GD VL +A T++ Sbjct: 306 SNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKSVNDRYGHDIGDLVLQDVAATVQGA 365 Query: 322 AR-KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVA 377 R GD+ R+GGEEFVLLLP T + A LAE IRV+ + ++ G RFT S GV Sbjct: 366 LRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIRVAFERTAVETEQGAVRFTASFGVD 425 Query: 378 HHEGNES--IDELFKRVDDALYRAKNDGRNRVLAA 410 + ID + KR DDALYRAK GRNRV A Sbjct: 426 VFRSDMDTGIDTVLKRADDALYRAKEAGRNRVQLA 460 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 16/324 (4%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 +++ E A++ ++ + S +K + + + D +A+ Sbjct: 268 IMLIEQAAYLASIAIEKNHSEVALKKNEERWRFALEGAGDGVWEYDFKTGKT--EASPRL 325 Query: 161 LNFYGYN---HETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK---LADGST 214 + G N E + + H W + + M I + + + + DG+ Sbjct: 326 MEILGLNANLPEDIERFHHWAAHTHPDSITNTMMAIQAMKDNNSDRYQIEQQKLCGDGTY 385 Query: 215 RHVQTYAGPIEIYGDK---LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 + + I D M+ DITE+K+LEE+L+ A D +TG+ NRR F Sbjct: 386 KWLLNRGMVISRSSDGKPLRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQA 445 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 E + S ++D D FK +ND YGH GD VL +A R+ D++ R Sbjct: 446 EQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRV 505 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGVAHH-EGNESID 386 GGEEF +LLP T A +AE +R +A + +FTVSIGVA ++ID Sbjct: 506 GGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNID 565 Query: 387 ELFKRVDDALYRAKNDGRNRVLAA 410 L D+ALY+AK GRNRV A Sbjct: 566 MLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_C5S5K7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K7_CHRVI Length = 433 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 12/298 (4%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPS----RDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 K+ + + S P+++ + + +I+ N A + GY E + + + Sbjct: 135 EKRDIPFEQIVAYASDPVVVTEADPVVGQGPRILYVNDAFTDLTGYTPEEVIGQSPRILQ 194 Query: 181 MLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 + + ++ G V+ P+ ++ I H Sbjct: 195 GEHTDPEARARIRQALIDRAPIREQILNYTKGGQEYWVELKIVPLRNARGEVTHFAAIEH 254 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT QK E L A D +TG+LNRR F + L Q+ SL +ID D FK Sbjct: 255 DITVQKAEELVLRELATTDPLTGVLNRRGFSEQAQGRLAGALRDGQELSLAMIDIDFFKR 314 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND +GH+ GD+ L LA L + R+ D++ R GGEEF +LLP L+ + L + R+ Sbjct: 315 INDTHGHAVGDQALIHLAGLLRTSFRESDVIGRLGGEEFAVLLPGATLEQSHVLMDRFRM 374 Query: 358 SVAKVSIS-GLPR---FTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLAA 410 +A + R FT SIGVA ++ + L K D ALY AK+ GRNRV A Sbjct: 375 RLAATPLKLHDGRWLGFTASIGVAELNPEKAGLAALTKAADSALYAAKHSGRNRVYLA 432 >UniRef50_Q30YD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30YD1_DESDG Length = 751 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 11/290 (3%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 ++Q R L ++ LL +G I++AN A N G+ E + ++ + Sbjct: 461 RRQAMMERDMLFRNSIDLLAITDVEGNILEANPAWENMLGWTAEELRLPPCFD-YVHPDD 519 Query: 186 VMPIMHEISHLPGG--HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 V + L G + +GS + P + + DI+ QK Sbjct: 520 VPKAAENFALLMKGIPVRAHEGRFLKKEGSWIWLSWNVLP--DMQHRRIYVTARDISRQK 577 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 E +L A D +TG+ NRR+ I + + + + L+ID D FK IND YG Sbjct: 578 AHERRLHEQASTDELTGIFNRRRVLDIGKAEMARSRRFGRPLACLMIDIDHFKQINDTYG 637 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GD VL + TL + R+ D + R GGEEF++ +P T + A+ AE +R +V + S Sbjct: 638 HVAGDAVLRGVTATLSAGLRQSDTLGRLGGEEFIVFMPETDAEGAMHTAERLRQAVEQSS 697 Query: 364 I-----SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 + P TVS+GV S+D D ALYRAK +GRNRV Sbjct: 698 VLMDGEGASPGITVSLGVTVLAPETASLDAFIAAADAALYRAKENGRNRV 747 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 91/352 (25%), Positives = 150/352 (42%), Gaps = 18/352 (5%) Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 LQ + I + + + L+ L + + V + + L + N Sbjct: 563 LLQEFNLINKNNHLVYVKGSLTLTKDLSGKDIAIFSFVDTTQEKQLKDILTREKKTLENI 622 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + F L N + + +I+ N T+E ++ Sbjct: 623 LDRANFGAFIFKLKNLENLEI-------EIIYKNKYFDTMI-----KNQGIKTFEDFLIF 670 Query: 184 RRVMPIM-----HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + +I+ GG +N + D ++ I + L+LCI+ D Sbjct: 671 DDDKKELMKRYLRKITADEGGVFTINDIIMKQD-KNIVLKLNMNRINQNHETLILCILQD 729 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ITE+ + + E + D +TG+ NRR E + S+++ D D FKHI Sbjct: 730 ITEESMIIKYFEELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPLSVIMFDIDFFKHI 789 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND YGH GD+VL +A + S R D++ R+GGEEFV++ P T L+ A +LAE +R Sbjct: 790 NDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLEDAKALAEKLRKE 849 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + T S GV ++ + + KRVD+ALY+AK +GRNRV+A+ Sbjct: 850 IENFLFEEGFSITCSFGVTSLNQEDTKETILKRVDEALYKAKREGRNRVVAS 901 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 + + FY FF +S PMLL+DP I +AN AAL+FYGY E + +W+IN LG Sbjct: 214 KDQNEFYKTFFEGHSIPMLLVDPD-TYSIANANQAALDFYGYTKEEITTLKSWDINTLGE 272 Query: 185 RVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 + M + IS F H+L G R V+ Y+ P+ + G +L IV+D+T+++ Sbjct: 273 KEMKEL--ISKAKNKELNFFKFKHRLKSGEIRDVEVYSSPVYLGGKIYLLSIVYDVTKEE 330 Query: 244 RLEEQLEHAAHHDAMTGL 261 R ++ LE D+++ + Sbjct: 331 RAKKFLEILKEIDSLSNI 348 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 103/328 (31%), Positives = 148/328 (45%), Gaps = 21/328 (6%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 L +I + L + +R Q KK + + + + V Sbjct: 3 LEIVGLLIFILLLAIALLLFVNLNRYRQQQTKKMMLDTYELILDQVDAYIYLKDTQCKYV 62 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGST 214 AN L+++G E + T + + V+ I+H K LN KL+D Sbjct: 63 YANQLTLDYFGVTLEKLKG--TSDSDYFPANVVDILHV-----NDTKVLNSQSKLSD--D 113 Query: 215 RHVQTYAGPIEIYGDK-----------LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 V T A I + K ++ I DIT L +LE A+ D +TGL N Sbjct: 114 IIVDTPASLIVYHEVKQPLYNHKGTLIGLIGISTDITAAYHLRSKLERLANTDPLTGLFN 173 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR F E + Q +SL++ID D FK +ND YGH GDEV+ +A R Sbjct: 174 RRSFTSFCEHEFFRATRYFQPFSLMIIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVR 233 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEG-N 382 + D++ R GGEEF +LLP T +D+A LAE +R + + P T+SIGVA + Sbjct: 234 EADVLARIGGEEFAILLPDTDIDSAYVLAERLREAQQQYEEQKTPSITISIGVATLRSQD 293 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ E+FKR D ALY +KN GRN V A Sbjct: 294 KAFLEIFKRADKALYSSKNVGRNSVNVA 321 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 16/290 (5%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 +Q + M++ +P DG +V N +A G + + + +++ Sbjct: 279 ESEQNKLQTIIRSAKEGMIVTNP--DGDVVLVNPSAERILGKTDDEIRGEGFFQLIDDPD 336 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQ 242 + + G P V+K R + Y I+ + + ++ D+T++ Sbjct: 337 YIRTFLETG----GFEMPETVVYK-----QRVLNLYVRSIKDDHGEPIGSAALILDVTDE 387 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 KRLE+QL + D +T L+NRR+ + + + + + S+LL+D D FK ND Y Sbjct: 388 KRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDVDHFKKFNDTY 447 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH +GD VL ALA ++S R D R+GGEEF ++LP T D A+ +A+ +R VA+ Sbjct: 448 GHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVADRLRERVAEK 507 Query: 363 SISGLPRFTVSIGVAHHEG--NESIDELFKRVDDALYRAKNDGRNRVLAA 410 + GL R T+SIGVA + D + + D ALY AK GRN+V+ A Sbjct: 508 EVDGL-RVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNKVVYA 556 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 20/411 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ--------DLTFSQLRTGPYSVSSQKELP 59 ++ + + +W+V E ++ N AA L+Q D+ G +S + Q P Sbjct: 87 VVETIPTGIWVVD-REGNVVDCNFAAHGLLQEFGIQAYNDIQGYAEIQGWWSDNGQ---P 142 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + + + T R++ + A + + L + P+ G T + + Sbjct: 143 VHPDEWGISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLKSENG---AITGAMALVQ 199 Query: 120 SANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 +RK RF F A + + +G+ + N A + GY+ + H W+ Sbjct: 200 DITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELESLHLWD 259 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 I+ + H+ DG V+ A ++ + V D Sbjct: 260 IDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRD 319 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT +K+ E++LEH ++HDA+TGL NR + + ++ ++ L+D DRFK I Sbjct: 320 ITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVI 379 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRV 357 ND GHS+GD VL A+A L +C GD + R GG+EF +++ A +A+ I Sbjct: 380 NDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILN 439 Query: 358 SVAKVSISG--LPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + + G R T SIG + + E ++L + D A+Y+AK G N Sbjct: 440 AFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGN 490 >UniRef50_A6Q191 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q191_NITSB Length = 622 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 132/309 (42%), Gaps = 6/309 (1%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 F +E TL K + + + F A ++D +I+ N + Sbjct: 315 FSSLEEIETLHKKQKQINKKLTMQTMEFQALFEFAQAGFAIVDIYTK-EIIKINKKMMEI 373 Query: 164 YGYNHETMCQKHT--WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 G+ E + K + + R+ ++ K NF+ + + R + Sbjct: 374 LGFTKEEILGKKYTKFVTSRFQDRIKTVLRSAVE---QGKVENFIAEFTAKNGRIKILKS 430 Query: 222 GPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 I + + +L D T E+ L AA D +T L NR + E Sbjct: 431 SIIFLPDQERLLITCEDYTAVYLREQNLIKAAQTDVLTNLPNRSAYQMKLEEQMSLFERY 490 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 +S+L ID D FK IND YGH GD+VL +A+ + R D VFR GGEEFV LLP Sbjct: 491 QTVFSMLCIDIDHFKKINDTYGHKAGDKVLQEVAKIMRKTLRSSDTVFRIGGEEFVALLP 550 Query: 342 RTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKN 401 T L A A+ +R + G TVSIGV +++ D +F R D LY AK Sbjct: 551 ETDLVAAKQAAQKLRTMIQDQMKLGSYNVTVSIGVTQVNFDDTYDSIFMRCDKCLYHAKQ 610 Query: 402 DGRNRVLAA 410 +GRN+V+++ Sbjct: 611 NGRNQVVSS 619 >UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6K0_9DELT Length = 457 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 133/292 (45%), Gaps = 10/292 (3%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 Q +A F S M L+ P DG + N A + GY + K +I Sbjct: 18 SDQHIFANAFRYASIGMALVGP--DGTWLKVNNALCSMLGYTSRELLSKKFQDITHPEDL 75 Query: 186 VMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITE 241 +++ L G + DG V ++ + + + DIT Sbjct: 76 EEDLVYVNRVLAGAIDTYQMEKRYFHRDGHIIDVLLSVSLVKESDGTPQFFISQIQDITR 135 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K+ E++L + D +T + NRR F + + ++L+ID D FK IND Sbjct: 136 RKQAEQELLLVSQQDPLTKVANRRFFMEHATRELTRGKRFHEPQAILIIDIDHFKTINDK 195 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 +GH GDEVL A+A R+ D+ R GGEEF +L T A +AE +R SV + Sbjct: 196 HGHDVGDEVLKAMATACSKALREVDVFGRIGGEEFAAMLLNTNDSVARIVAERVRESVER 255 Query: 362 VSISGLPR---FTVSIG-VAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +S++ + FT+SIG V+ G+ ++D+ K D ALYRAK GRNRV Sbjct: 256 LSVNVGGKEIPFTISIGLVSFLGGSNTLDDRMKMADKALYRAKESGRNRVEV 307 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 128/309 (41%), Gaps = 13/309 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 I A K R+ N R+ + Y F + + S G + AN A YGY Sbjct: 502 IIAVIRNITKRKRAENELRQAEEKYRSIFENATEG--IFQSSPSGSYISANPALARIYGY 559 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISH---LPGGHKPLNFVHKLADGSTRHVQTYAGP 223 + Q H +I + H G DGS + A Sbjct: 560 DSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENARA 619 Query: 224 IEIYGDKLML--CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 + ++ V DI+ +K+ E + + A HD +TGL NR F Sbjct: 620 VRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRY 679 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 ++ +D DRFK IND GH+ GD++L +A+ L C R+ D + RWGG+EF LLLP Sbjct: 680 QHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLP 739 Query: 342 RT-PLDTALSLAETIRVSVAKVSIS---GLPRFTVSIGVAHHE-GNESIDELFKRVDDAL 396 ++ +AE + S+ K S T S+G+A + E L + D AL Sbjct: 740 HVQTPADSVKIAERLLASL-KPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAAL 798 Query: 397 YRAKNDGRN 405 YRAK +GRN Sbjct: 799 YRAKEEGRN 807 Score = 74.1 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 50/150 (33%), Gaps = 7/150 (4%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 GI R+ + R+ + Y F +A + S +G+ + N A Y Sbjct: 252 AGIVVNTRDITDHKRTESALRQAEEKYRSIFE--NAVEGIFQSSPEGRYIRVNPALARMY 309 Query: 165 GYNHETMCQKHTWEIN---MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 GY+ H +I + + DGS + +A Sbjct: 310 GYDSPEELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHA 369 Query: 222 GPIEIYGDKLML--CIVHDITEQKRLEEQL 249 + KL+ V +IT++KR E QL Sbjct: 370 RAVRDGTGKLLYYEGTVENITDRKRTELQL 399 Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 5/150 (3%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 GIE T R+ + + + +++ L+ G ++ + G Sbjct: 127 GIEGFITDITPLKRAEAALIQAEARWRSLI--HNSSDLITILDAQGTVLYHSPVLKRLLG 184 Query: 166 YNHETMCQKHTWEINMLGRR--VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAG- 222 Y+ + K + + R V + + + + DGS R +++ Sbjct: 185 YHPQNCEGKSAFGLVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRN 244 Query: 223 PIEIYGDKLMLCIVHDITEQKRLEEQLEHA 252 + ++ DIT+ KR E L A Sbjct: 245 LLADPAVAGIVVNTRDITDHKRTESALRQA 274 Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 12/144 (8%) Query: 118 SRSANYQRKKQGFY----ARFFLTNSAPMLLIDPSRDGQ--IVDANLAALNFYGYNHETM 171 S++ Q + + F L +S P ++ S D Q + + L GY+ + + Sbjct: 2 SKAQAIQSEDKEFLAYTSRFLRLIDSLPGIVFSGSNDAQWSMQYLSRGCLALTGYSSDEL 61 Query: 172 CQKHTWEINML--GRRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEIY 227 QK N + + ++ +S +P +++ G + V + Sbjct: 62 AQKGGEAFNAITHPEDLPRVLATLSAAIASSEPYEVEYRIRTKSGEEKWVLEKGHRVLDE 121 Query: 228 GD--KLMLCIVHDITEQKRLEEQL 249 + + DIT KR E L Sbjct: 122 DQCTCGIEGFITDITPLKRAEAAL 145 >UniRef50_A0L7S5 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S5_MAGSM Length = 571 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 27/404 (6%) Query: 24 EQLIYANSAAKLL----MQDLTFSQLRTGPY-----SVSSQKELPKYLSDLQNQHDIIEI 74 +++I+ N A + L L + L S+ Q+ L+ L+ + + I Sbjct: 169 QRIIFLNPAGEKLLEYSESALHLTTLNEQLIPHTCGSLHDQQSADHMLAALRGETEQISG 228 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 T+ R L ++ I+ + L + R + ++ A+ Sbjct: 229 ETLFRTR-------TGKLIPISFNAAPILDGHFLSGGVLSFRDIRDQREKEERLKLAAKI 281 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 F + ++++D R IVD N A GY E + + E+ R I Sbjct: 282 FNHSQEGLVVLDAER--IIVDVNPAFSYITGYTREEVIGRSP-ELLRSQRHDAAFYQSIW 338 Query: 195 HLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 G+ + +G I ++ + + DIT +K EE+L+ Sbjct: 339 QQAENQGNWQGEIWRRRKNGEEFPEWLSLSIIRGENQQISHYIGLFSDITTRKIAEEKLK 398 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 H AHHD +TGL NR + + ++L ID D FK +ND YGH GD V Sbjct: 399 HQAHHDPLTGLPNRSLLEDRLQQAVSKARRYEGKIAVLYIDLDHFKPVNDNYGHEAGDAV 458 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAETIRVSVAKVSISGLP- 368 L ++ + R+ D R GG+EFV +L + + +A+ + ++ K G Sbjct: 459 LREISARIRYELRQSDTAARVGGDEFVAVLTEIREEHLVMGVAQKLIHAIQKPVNFGNES 518 Query: 369 -RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + SIG++ + SI +L K D A+YRAK +GRNR A Sbjct: 519 FQVGCSIGISLYPIHGNSITKLLKSADTAMYRAKQEGRNRFCVA 562 Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 16/212 (7%) Query: 54 SQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATL 113 + L L+ I + + + +E A L Sbjct: 72 PDMDGLSVLRQLKANPPTQNIPVIMVTGNDRPRDLAHAFEEGATDYITKPIRRVELLARL 131 Query: 114 G--LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 +K R+ R + + +L +D ++ +I+ N A Y+ + Sbjct: 132 RSIIKLERAMQQVRSSEKRLRDLTASLGEGLLSVDNAQ--RIIFLNPAGEKLLEYSESAL 189 Query: 172 ------CQKHTWEINMLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGP 223 Q L + H ++ L G + + + + G + A P Sbjct: 190 HLTTLNEQLIPHTCGSLHDQQ-SADHMLAALRGETEQISGETLFRTRTGKLIPISFNAAP 248 Query: 224 IEIYGDKLMLCI--VHDITEQKRLEEQLEHAA 253 I + G L + DI +Q+ EE+L+ AA Sbjct: 249 I-LDGHFLSGGVLSFRDIRDQREKEERLKLAA 279 >UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SC92_CHRVI Length = 1124 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 10/278 (3%) Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 S + ++ S DG IV+AN +GY + E+ R ++H L Sbjct: 415 ASIDVGVLAVSADGVIVEANRRIAEMFGYAIRELIGLPLQELIPPAFRRAHVLHVERFLH 474 Query: 198 GG------HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 G + DGS V+ I++ G +M+ + D+TE++ EE+L Sbjct: 475 GSAYDRRMSERSELSGYRKDGSIFPVEISLSKIQVDGRWVMVATILDVTERRLAEEELVW 534 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A HD +TGL NR + E + Q +LL ID D FK +ND +GH GDE+L Sbjct: 535 HAIHDPLTGLPNRTMIHERLERALRRSKQQGQSVALLFIDLDGFKLVNDSHGHQAGDELL 594 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETIRVSVAKVSISGLPRF 370 +A+ L R GD + R GG+EFV+L A++ LA+ + + + R Sbjct: 595 KTVAQRLVDHVRPGDTIGRLGGDEFVVLCDHVESPAAVANLADRLNDLLREPVTLSGRRL 654 Query: 371 --TVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 + SIG+A G S D+L + D A+Y+AK GR+ Sbjct: 655 FASASIGLAIGHGTTHSADDLLRNADAAMYQAKEQGRD 692 >UniRef50_B6BK11 Ggdef/pas/pac-domain containing protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BK11_9PROT Length = 464 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + F N++ +LL+D + +I N + G++ + + + + I Sbjct: 176 TKKRFEMIFENNASGILLVDENC--KINMVNKQFCDIIGFSKDELIGQSSR-IFHTDDTS 232 Query: 187 MPIMHE--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-MLCIVHDITEQK 243 I E + L + K D + + PI+I D ++ + DIT +K Sbjct: 233 DKIRKENFSKTKDSSYMKLEYKLKTKDNKNIWCEFFGSPIKITEDTTNIIWNILDITAKK 292 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ-DYSLLLIDTDRFKHINDLY 302 L+EQLE A D +T L NRR F E + + SLL+ D D+FK IND Sbjct: 293 NLQEQLETQATTDYLTELHNRRYFTSRLEEEVARIKRDKKVTSSLLMFDLDKFKLINDTL 352 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GD VL A L+ RK D+ R GGEEF ++LP T + A LA IR V+ Sbjct: 353 GHLMGDVVLKIFADILKKNLRKSDIAGRIGGEEFAMILPSTNIREAKVLANRIREEVSNK 412 Query: 363 SI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLA 409 FTVSIG+ ++ + D F R D ALY AK GRNRV Sbjct: 413 KTIIDGNSINFTVSIGLTAIASDDANSDSAFARADTALYMAKGKGRNRVEV 463 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 13/285 (4%) Query: 136 LTNSAPMLLIDPSRDG------QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 + +A ++I D +I+ N A GY+ E + K + G Sbjct: 11 IVEAAKDVVIVTKADLIDEPGPEIIYVNQAFTELTGYSKEEVIGKTPRILQSKGTSEETK 70 Query: 190 MHEISHLPGGH-KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLE 246 L + + G + P+ ++ ++ I D+TE + Sbjct: 71 KLIRKGLEDKVPVRVTIKNYSKTGKEYWLDLSITPLFNDQGEVTHIVSIQRDVTEYIYTQ 130 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 +LE + D +TGL+NRR F + E ++ YSLL +D D FK IND YGH Sbjct: 131 NKLEELSRTDPLTGLINRRVFDEMAEKEFYRYQNQNIHYSLLALDIDYFKRINDKYGHLT 190 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GD VL + + E R D + R GGEEF ++LP T A+ +AE +R +++ Sbjct: 191 GDYVLASFSTLCEKNIRSQDKIARIGGEEFCIILPATDKVGAIEVAEKLRRAISNARFKQ 250 Query: 367 LPR---FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 TVSIGV+ + ++ + KR D+ LYRAK+ GRN+V Sbjct: 251 DEHEIAVTVSIGVSQVKMSDYDYVAMLKRADENLYRAKHQGRNQV 295 >UniRef50_Q7MSI2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSI2_WOLSU Length = 431 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 136/307 (44%), Gaps = 16/307 (5%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 L A R Y R ++ D I AN A GY+ E + K Sbjct: 128 LIRREEARQNRSLLREYKRIV---DETAMICKIDLDKTITYANEAFCQISGYSKEELTGK 184 Query: 175 HTWEINMLGRRVMPIM--HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL- 231 + + + + ++ L G G +Q P+ K+ Sbjct: 185 IYRHMVSPRQDLSRLDGGLWVNVLRGKSWKGMIELLNKKGEPYFIQASMFPLFDADGKIT 244 Query: 232 -MLCIVHDITE-------QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 ++ + DITE ++ ++LEH AH D +TG+ NR +F I + Sbjct: 245 ELIALQFDITEHIKTKQILEKQNQKLEHIAHTDTLTGVWNRYKFNKILRQEIKCAKSSNH 304 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR-KGDLVFRWGGEEFVLLLPR 342 +SL+L+D DRFK IND +GH GD VL A+ TL+ + K ++ RWGGEEF++L Sbjct: 305 PFSLMLLDVDRFKTINDTHGHQFGDRVLKAITSTLKRQLKHKEAMIARWGGEEFIVLAQG 364 Query: 343 TPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKND 402 L AL LAE +R ++ + +P T S GV + +D L +R D ALY AK Sbjct: 365 YRLAQALELAERLRAAIEGMEFENIP-ITSSFGVTEFSPEDELDTLVRRADLALYTAKES 423 Query: 403 GRNRVLA 409 GRNR+++ Sbjct: 424 GRNRIIS 430 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 7/291 (2%) Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +R + + +S+ + + DG I+ N A GY + + ++ + Sbjct: 768 ERKRMEARLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQS 827 Query: 182 -LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 R + + G ++ DG T ++ K+ + + D Sbjct: 828 GFQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSD 887 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ITE +R +QL+H AHHD +TGL NR + ++ ID DRFK+I Sbjct: 888 ITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNI 947 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL-SLAETIRV 357 ND GH GD VLC +A L R+ D V R GG+EF++++ TA+ +AE I Sbjct: 948 NDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILN 1007 Query: 358 SVAKVSISGLPR--FTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + ++ SIG++ + + L K D A+YRAK GRN Sbjct: 1008 VLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRN 1058 Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 7/152 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 ++ L + + ++ F + + P + S++G+ + N A L G Sbjct: 633 RQSHLELEQRVADRTLELSQQLHFMRQLIE--AIPGPVFYKSQEGRYLGCNQAFLELIGK 690 Query: 167 NHETMCQKHTWEINM--LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 + + + +++ L R E+ G ADG R V + Sbjct: 691 SRDEVVGATVYDVAPADLADRYKAADDELLARLGSQV-YEARVLDADGHYRDVIFHKATY 749 Query: 225 EIYGDK--LMLCIVHDITEQKRLEEQLEHAAH 254 G+ ++ ++ DITE+KR+E +L AA Sbjct: 750 GKPGENGGGLVGVMLDITERKRMEARLLQAAT 781 Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 9/173 (5%) Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 K + + CR+ EP + T +A R+ ++Q F Sbjct: 341 KSDGLPIWCRVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQAL---IFERAP 397 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG 199 + + RD I N + +GY + + T + Sbjct: 398 TGIAFL---RDRVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWREAGERAYAVADE 454 Query: 200 HKPL--NFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKRLEEQL 249 + ADG+ Q + + + + D+T ++ EE L Sbjct: 455 SGKFIGELEYCRADGTPIWCQVTGSLLNPANPAEGYVWLFEDVTARRAAEEAL 507 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 57/173 (32%), Gaps = 9/173 (5%) Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 + T + C++ L P + + T A + + + + + ++A Sbjct: 468 DGTPIWCQVTGSLLNPANPAEGYVWLFEDVTARRAAEEALV-----ESLWEQQLIFDNAM 522 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGG 199 + + R+ I+ N +GY + + T + + ++ G Sbjct: 523 IGISYH-RNRMILRCNRRCEEIFGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGESASGE 581 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQLEH 251 +++ DG+ V I E + + D+T Q+ E+ L Sbjct: 582 TFDGELLYQRRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQRAAEQALRQ 634 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 15/191 (7%) Query: 71 IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 I+++ T + + + L+ R + P + I T + ++ ++Q Sbjct: 82 IVDLETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEVLTRDTSARLLREQQL 141 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM 190 F ++++ R+ I N GY + + + T + Sbjct: 142 ---IFENAETGIVIL---RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETG 195 Query: 191 HEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKRLEE 247 G + + + +G + + D+ + + D++E++ Sbjct: 196 RRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVWLYEDVSEKRAS-- 253 Query: 248 QLEHAAHHDAM 258 AA DA+ Sbjct: 254 ----AAAMDAL 260 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 8/131 (6%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVM 187 + + +AP+ + RD I N + +GY+ + + T R Sbjct: 261 LREQTLIFEAAPIGI-AFVRDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREK 319 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKR-- 244 ++ G + +DG + ++ + D+TE+++ Sbjct: 320 GERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVWLFEDVTEKRQAD 379 Query: 245 --LEEQLEHAA 253 +E L A Sbjct: 380 RAMEALLREQA 390 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 17/315 (5%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 GI ++ + S + ++Q Y + ++ ++LI+ + ++D N+ ++ Sbjct: 281 GIIVIMSIAIIVSTMLFFANRRQKKYFHNIINSATNIVLINNRK--TLLDVNMIFFKYFD 338 Query: 166 -YNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD---------GSTR 215 Y +K I + + + G V + G Sbjct: 339 RYKTLEEFKKDNECICDFFVEEEGCIK--ADMDGVKWVDYLVENHSKVHKIKIDIFGKVY 396 Query: 216 HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + A + + ++ DITEQ+ +++LEH + DA+TG+ NRR F+ E Sbjct: 397 YFSVSASKV-LKEKNYYSIVLTDITEQENYKKELEHLSVTDALTGIGNRRYFHQKIEEEI 455 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 + SL++ D D FKH+ND +GHS GDEVL + + S R+GD+ R GGEE Sbjct: 456 HRAKRYQHPLSLIMFDIDFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEE 515 Query: 336 FVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDA 395 F+++LP D A +AE +R + + T+S GV + E I+ +FKRVDDA Sbjct: 516 FIIILPHALRDEAQKIAEKLRAKIE--FCQKVIPITMSFGVVEYIVGEEIEFIFKRVDDA 573 Query: 396 LYRAKNDGRNRVLAA 410 LY+AK GRN V+ Sbjct: 574 LYKAKESGRNIVVVG 588 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 96/416 (23%), Positives = 161/416 (38%), Gaps = 20/416 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLT---FSQLRTGPYSVSSQKELPK 60 + + P+ + Q I N A + + + E K Sbjct: 451 KFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAK 510 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + + + + + V L+C + R +T + + R+ Sbjct: 511 RIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVTTLRDITQQQ----RA 566 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSR-DGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + +A+ F +S+P + R G+ ++ N GY+ + + +EI Sbjct: 567 EAALKSSEEKFAKAF--HSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEI 624 Query: 180 NML-GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + + + G + + G V+ PI + +L D Sbjct: 625 GIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARD 684 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +++ K + Q+ H A+HD +T L NR +LL +D D FKHI Sbjct: 685 VSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHI 744 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLA 352 ND GH GD VL + LE+ R D V R GG+EFV+LL + LA Sbjct: 745 NDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELA 804 Query: 353 ETIRVSVAK-VSISGL-PRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRN 405 +T+R +A+ +S+ G + T SIGVA + + +L KR D ALYRAK+ GRN Sbjct: 805 DTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRN 860 Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 6/212 (2%) Query: 41 TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETE 99 +F G Y S + +I + E T+ R + Sbjct: 364 SFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQG 423 Query: 100 PVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 + G T ++ + + + +A F + P+ + GQ ++ N A Sbjct: 424 IPLRMAGTLLDITDQVEREQRLSA---SEEKFASLFQVSPDPICVTRQD-TGQFIEINPA 479 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQ 218 +G++ + + EI + V E + V +G Sbjct: 480 FTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCV 539 Query: 219 TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 + I + + + DIT+Q+R E L+ Sbjct: 540 ISSRLITVDDQPCSVTTLRDITQQQRAEAALK 571 Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 2/137 (1%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + + +A F + +LL RDG I + N + +G+ + K Sbjct: 182 TRQRERETALINSEKRFATLFHLSPNAILLTR-RRDGMIFEVNQHFEDMFGWPGSQVIGK 240 Query: 175 HTWEINMLGR-RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 + E+ + + E + GG + + G IE+ G ++ Sbjct: 241 TSLELGLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELEGVTFLI 300 Query: 234 CIVHDITEQKRLEEQLE 250 D TE+KR E+ L+ Sbjct: 301 STFVDTTERKRAEQALK 317 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 100/400 (25%), Positives = 154/400 (38%), Gaps = 16/400 (4%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI--- 74 IV E +L + N A+ L+ + +L P+ + +++ Sbjct: 151 IVLDAEGRLTFMNPEAERLLG-WSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGA 209 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 R +EE L ++ + A ++ A+ Sbjct: 210 GETYRSDEEYFTRKDGALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAAKV 269 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 T + +++ D G I N A GY+ I GR ++ Sbjct: 270 IETTTEGIMITDAG--GVIESVNPAFCRSTGYSESEAIGNSPR-ILKSGRHDGEFYRKMW 326 Query: 195 H--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEEQLE 250 L G ++ G I+ + I DITE KR +E+++ Sbjct: 327 KALLETGQWQGEIWNRRKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIK 386 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 H A+HDA+T L NR F Q ++L +D DRFK IND YGH+ GD + Sbjct: 387 HQAYHDALTDLPNRLLFIDRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLL 446 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV-SISGLP 368 L +A L R D V R GG+EF +LLP+ ++ A +A+ I S+ + S G+P Sbjct: 447 LQGVAGRLRRAVRDSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIP 506 Query: 369 R--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T SIG+A E + L D A+YRAK GRN Sbjct: 507 SFCITTSIGIAVCPTDGEEAETLMHNADAAMYRAKAQGRN 546 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 12/155 (7%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL----IDPSRDGQIVDANLAALNFYGY 166 A L + R Q ++ AR ++ L I +G++ N A G+ Sbjct: 113 AVLRQRVRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGW 172 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISHLP-------GGHKPLNFVHKLADGSTRHVQT 219 + + K I R + E L ++ DG+ V Sbjct: 173 SLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSL 232 Query: 220 YAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAA 253 + P+ + + HDI+++K++EE+L AA Sbjct: 233 VSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAA 267 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 12/352 (3%) Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 + D+++I V E L + + + + +A + Sbjct: 144 ERDVVQIAVVDATE-RVTHESELEFNRAQLENQAVELVALAEDLNAEREQLETARLDADE 202 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE-TMCQKHTWEI--NMLGR 184 + + L + P +G+I N A +G +H M ++ Sbjct: 203 GRRFLQT-LIATIPNPFFHQDLEGRIRGCNAAFAALHGRDHRTDMFGLTVADLTDAAFSS 261 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQ 242 R + E+ GG+ V A+G R + + + ++ ++ DITEQ Sbjct: 262 RTERLDAELMA-KGGNVSYEAVFADAEGRARTMIYNKAVLTDAAGQAVGLVAVITDITEQ 320 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 KR+EE L A D +TG LNRR F + ++ L D D FK +ND + Sbjct: 321 KRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQRHGEPVTVALADIDHFKRVNDQH 380 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH+ GDE L T+ R D++ R GGEEF L+LP T L +A+ LA+ +R ++A + Sbjct: 381 GHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILPHTALASAMLLADRLRQTLANL 440 Query: 363 SIS---GLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + G FTVSIG+A +ID L + D+ALYRAK+ GRNRV+AA Sbjct: 441 RVPCPSGEVEFTVSIGLAELGTHGTTIDTLLQAADEALYRAKSAGRNRVIAA 492 Score = 42.5 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 15/132 (11%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL 203 ++ + + AN L G + L ++ +++H H+ Sbjct: 56 VLIVDSTLRPLYANREFLRLLGLPDADTLLRPAGLERFLPEDNRQVLLDMTHRLFSHQSQ 115 Query: 204 NFVHK----LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMT 259 + AD +T + A ++ V D TE+ E +LE Sbjct: 116 RASQRLEVVRADNATLWLDFSAALGRWAERDVVQIAVVDATERVTHESELE--------- 166 Query: 260 GLLNRRQFYHIT 271 NR Q + Sbjct: 167 --FNRAQLENQA 176 >UniRef50_A0L7G7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7G7_MAGSM Length = 476 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 101/383 (26%), Positives = 159/383 (41%), Gaps = 39/383 (10%) Query: 54 SQKELPKYLSDLQNQHDIIEILTVQRKEEET----ALSCRLVLRKLTETEPVIIFEGIEA 109 + + ++N I+ +E A+ + L T+P + + Sbjct: 70 PKMDGLSMARAIRNDDTQTPIIVTTAYNDENFFMRAIELSIDQYVLKPTDPYQLINAV-- 127 Query: 110 PATLGLKASRSANYQRKKQGF--YARFFLT-NSAPMLLIDPSRDGQIVDANLAALNFYGY 166 L+ R+ QR+++ YARF L + P+ +I+ +G I N A + F G Sbjct: 128 -----LRCGRNLWRQREREAANQYARFLLDIQTNPLAVIN---EGAIEHLNKAFIQFLGV 179 Query: 167 NHETMC---QKHTWEINM-LGRRVMPIMHEISH-----LPGGHKPLNFVHKLADGS---- 213 QK +I + LG R + E + L G + A G Sbjct: 180 EDLAAFREQQKSGLDILLILGERSYSLTKESAQISNALLEAGDAQAIVYLRCAGGGCQAL 239 Query: 214 ------TRHVQTY---AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNR 264 R V+ A + G ++ DI + +LE A D +TG+ NR Sbjct: 240 KKQDDLQRSVELRPFAASVNLLEGHNKLVFTFADIASIESHMRKLEEIAFTDGLTGVANR 299 Query: 265 RQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 I + +S++L D D FK +ND +GH GD+VL LA T+ R Sbjct: 300 ASLQQILNAEMQRSRRHGGTFSIILFDIDHFKQVNDNFGHQVGDDVLRLLASTIADNLRA 359 Query: 325 GDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNES 384 D + RWGGEEF+++ P ++ A LAE +R + ++ + + T S GV + N+ Sbjct: 360 TDTIARWGGEEFMVVCPEINIEAAHRLAEKLRQLIEHITFPEVKQITSSFGVTQFQKNDQ 419 Query: 385 IDELFKRVDDALYRAKNDGRNRV 407 L +R D ALYRAK GRNRV Sbjct: 420 SRSLTQRADCALYRAKEGGRNRV 442 >UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EST0_ARCB4 Length = 463 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 27/291 (9%) Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 ++ + G I N GY E + K I I E+ KP Sbjct: 162 IVSKTNPKGLITYVNDKFCEVSGYRREELIGK-AHNIIRHPSMPSKIFKELWDTIKNKKP 220 Query: 203 LN--FVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL--------- 249 + DG + V + PI + + I +D+TE + +EQL Sbjct: 221 WQGLITNLRKDGRSYVVYSTIVPILDIDGDIVEFIAIRNDVTEFENAKEQLSTLNKAMKH 280 Query: 250 ------------EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 E A D +TG+ NR +F + + S++L+D D FK Sbjct: 281 KVDELYSMAQTLEQQASIDILTGIFNRMKFEEFFDLEVQKAKIQKNPLSIILLDIDDFKR 340 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND +GH +GDEV+ +++ L R D + RWGGEEFV+LLP T L+ A +A +R Sbjct: 341 INDTFGHDEGDEVIKSISNLLTKNVRGTDTLSRWGGEEFVILLPNTSLEQAKIVANNLRR 400 Query: 358 SVAKVSIS-GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + + + T S GVA + ++ ++LFKRVD LY+AKN G+N V Sbjct: 401 IIFEHDFNVSQKKITCSFGVAIYNYEDTKEKLFKRVDKILYKAKNSGKNIV 451 >UniRef50_Q6AJN6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJN6_DESPS Length = 382 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 87/309 (28%), Positives = 128/309 (41%), Gaps = 10/309 (3%) Query: 112 TLGLKASRSANYQRKKQGFYARFF--LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 A R K+ F + P++ +G ++ N GY+ E Sbjct: 54 RQRELADRDHEASPAKREISWPVFQKIVEDMPIMFDAVDENGVVLFWNRECEKVTGYSSE 113 Query: 170 TMCQKHTWEINMLGRRVMPI--MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 + R+ + E G ++ DG+TR + E Sbjct: 114 EIVGNPHALELFYPDRLQRARNLAEFLQFNGSYRDWEVDLLCKDGTTRTISWSNTSREAP 173 Query: 228 -GDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 DITE +R E+ L A D +TGLLNRR+ I + + + Sbjct: 174 IPGWYTWGTGIDITEDRRAEQLLMELASRDELTGLLNRRKIMEILDTEIKRAADNKTALT 233 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 L L+D D FK +ND++GHS GD VL +A T+ RK D V R+GGEEF +LLP T + Sbjct: 234 LCLVDIDHFKKVNDVHGHSAGDTVLRYVADTIRRGIRKADRVGRYGGEEFCILLPHTSIS 293 Query: 347 TALSLAETIRVSVAKVSIS----GLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKN 401 A + E IR +A ++ ++S+G + S +L D ALYRAK Sbjct: 294 EASLVLERIRQDIAAMTFPLDSSDELSLSISLGQVQYAPAIRSPRQLIDLADTALYRAKR 353 Query: 402 DGRNRVLAA 410 GRNR+ A Sbjct: 354 SGRNRLCTA 362 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 156/404 (38%), Gaps = 10/404 (2%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 L L PV + P +++ N A + + + + + + + + + Sbjct: 14 AQLSLFPLPVLVYDPVTLRVLEVNDVALRWFGHQRETMVGSQVIDMVANDYVDRMMGYIA 73 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 D T E + I +EG A + + + R Sbjct: 74 GLSD-----TDWSSGEWQLRRADGSCFEARSFSRGIEWEGRRARLAVVEDLTEPRRHMRA 128 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + ++ T A ++ + +D + N ++GY+ + + K ++ Sbjct: 129 LEESEQQYRATMGAALVGVYVLQDFRFRYVNPELCRYFGYSADELVDKLGPLDLVVAEER 188 Query: 187 MPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 + +++ G P DGS + P G + V D++E K Sbjct: 189 EYVREQLARRARGEPGHPFELTGLRRDGSHFPFMVFGAPSTWRGQPASVGTVFDLSEIKA 248 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 E+++ A+ D +TGL NR ++ + +L+ ID DRFK +ND GH Sbjct: 249 AEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTVNDSLGH 308 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD++L + L R D V R GG+EF++L P T + A+ LAE I A Sbjct: 309 LMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFAAPFD 368 Query: 365 SGLPRFTV--SIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 T+ SIG+A + + + L + D A+Y+AK +GRN Sbjct: 369 LDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRN 412 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 8/293 (2%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 ++ + +P ++ D I AN GY+ + + K+ + Sbjct: 587 ETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKNPRFM 646 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCI 235 G+ ++ G ++ DG+ P+ ++M L I Sbjct: 647 QS-GKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMNYLAI 705 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DITE++ EE++E H D +TGL NR Q + + +++ +D D F Sbjct: 706 KEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHF 765 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K IND GHS GD++L +A+ L+ R D V R GG+EF+L+LP T + A +A + Sbjct: 766 KDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKL 825 Query: 356 RVSVAK-VSISGLPRF-TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 +V++ T SIG+A + E+ + L K D A+YR K+DGRN Sbjct: 826 MEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRN 878 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 134/295 (45%), Gaps = 19/295 (6%) Query: 135 FLTNSAPMLLID---PSRDGQIVDANLAALNFYGYNHETMC------QKHTWEINMLGRR 185 L AP +L D + V + + G + M EI + Sbjct: 161 LLLQRAPSVLYTFQVRGEDRRFVYCSPVSTRLLGLTPQMMTAVPFGPGHPLREIILPEDL 220 Query: 186 VMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGP-IEIYGDKLMLCIVHDITEQK 243 + H + NF +G R + T A G + + D+TE K Sbjct: 221 ERIVQHYHSGNFHHHSWRSNFRICAENGDVRWIHTEASASHPGDGSIVFYGSMLDVTELK 280 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 + E L+ A D++TG+ NRR F + Q ++ + SLL+ID DRFK ND YG Sbjct: 281 QSETLLQVLAQTDSLTGIANRRHFDERYQHLWRQQESMQKPLSLLMIDIDRFKRFNDSYG 340 Query: 304 HSKGDEVLCALARTLESCARKGD-LVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 HSKGD + ++ TL + + L+ R+GGEEF+++LP T AL LAE R +V + Sbjct: 341 HSKGDACIKSVVETLAAQLPSSECLLGRYGGEEFIMVLPETDHRQALILAERCRQAVESM 400 Query: 363 SISG----LPRFTVSIGVAHHEGNE---SIDELFKRVDDALYRAKNDGRNRVLAA 410 I TVSIGVA + E S+ +L D ALYRAK+ GRNRV A+ Sbjct: 401 EIPHTKSPQGVVTVSIGVAAAKPGETGSSMTQLSNDADQALYRAKHQGRNRVEAS 455 Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 3/109 (2%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + S +I +D +I N A +G++ + + + +L + + + Sbjct: 36 LLMNASTQAAMISTDQDNKITLFNSGAERLFGFSAQEVIGLDAGTV-LLRQGDVGQLSPQ 94 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDIT 240 L + ++ +G + I + L+ L I+ DIT Sbjct: 95 ELLCCNQAFSAWCYRKKEGGIFWGELSFHEIRLPNGHLLGYLSIITDIT 143 >UniRef50_B8FWQ7 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfitobacterium hafniense RepID=B8FWQ7_DESHD Length = 331 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 19/292 (6%) Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 F + M ++ P + + N A GY + + E+ + + Sbjct: 38 KNAFEHTALGMAIVSPDC--RFLKVNRAYGEITGYTRPELLKMAVKELTHPEDQEKDTPY 95 Query: 192 EISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEE 247 G V + +GST V++ + L + + D+T K E+ Sbjct: 96 LQEVFAGNIHSFTTVKRYIHKNGSTIWVRSTISAVRTERGNLKYFVAQIQDMTIAKNAED 155 Query: 248 QLEH-------AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 +L A D +T LNRR F + + + ++++L+D D FK +ND Sbjct: 156 ELRKSRDNAEVLARTDYLTKTLNRRAFIERLQEELERTKRTQEGFAMILVDIDYFKKVND 215 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 +GH GD VL A L + R D + R+GGEEF++ LP T ++ A +AE +R SV Sbjct: 216 QFGHLAGDYVLQKFADCLSNNVRPYDFIGRYGGEEFIICLPDTDVEQAALVAERMRESVE 275 Query: 361 KVSIS---GLPRFTVSIGVAHHEGN--ESIDELFKRVDDALYRAKNDGRNRV 407 + + + T S GVA ++ + +++DEL ++ D A+Y AKN +N V Sbjct: 276 ALEVDYLHAQIKVTGSFGVAVYDSHSSDTLDELIEKADGAMYVAKNH-KNTV 326 >UniRef50_C0QPE2 Diguanylate cyclase/phosphodiesterase domain 1 n=1 Tax=Persephonella marina EX-H1 RepID=C0QPE2_PERMH Length = 561 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 9/299 (3%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 ++ R+++ Y L + +++ DG I N F+GY + + K+ + Sbjct: 265 QAEAALREREKNYRE--LVENVNSIVLRWKPDGTITFINRFGEKFFGYKRKELIGKNVCD 322 Query: 179 INML-----GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM- 232 + G + ++ +I+ P + + DG + P+ + L+ Sbjct: 323 TIVPQCDSEGNNLHQMIEDITRNPNRYVNNENENMTKDGKRVWILWKNRPVYDSDNNLIE 382 Query: 233 -LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 I HDITE+K LE++LE A D +TG+ NR +F I E + L L D Sbjct: 383 IFSIGHDITEKKILEKKLEKLATTDGLTGIYNRVKFEEILEEKLRDFSLNGSKFCLFLFD 442 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND YGH +GD VL + + R L RWGGEEF++L P T L + + Sbjct: 443 IDNFKKINDSYGHHRGDHVLKEVVNVVRRSLRNDSLFARWGGEEFIILFPNTDLKSCFHV 502 Query: 352 AETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + IR +++ + R T+S G+ + + +R D+ LY+AK G+N V+A Sbjct: 503 VDGIRKMISRHVFDVVGRITISGGITEVLEGDDSVSIVRRADNLLYKAKGSGKNIVMAG 561 Score = 62.5 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 5/135 (3%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 Q +++ Y ++++ + G + N A + G E + + Sbjct: 16 ERLKKQIEEKNRYKTIVENAGEAIVIL---QGGYMKYLNPKAASLVGIPREKLLNSTFEQ 72 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD--GSTRHVQTYAGPIEIYGDKLMLCIV 236 + M + + I+ L G P ++ ++ D T+ +Q I G +L Sbjct: 73 FIHPEDKQMVLNNYINRLQGKPAPESYTFRIRDINLQTKWLQIRPVKITYEGKPAILNFF 132 Query: 237 HDITEQKRLEEQLEH 251 DIT+QK LE+ LE Sbjct: 133 IDITKQKELEKILEK 147 >UniRef50_B3E5T6 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E5T6_GEOLS Length = 637 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 135/300 (45%), Gaps = 9/300 (3%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 L + + A + + + P +ID +R Q+ AN A G H Sbjct: 333 LMVSLYQRARAMSRLNRLFHQALDALPYPFHIID-ARTYQVRVANRQAAR--GLEHPEGM 389 Query: 173 QKHTWEIN---MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 H P I G + H +G R V+ + P++ Sbjct: 390 TCHALSHGCAHPCDSSEHPCPVRIVLETGAAAVVEHSHYTENGEQRIVEVHGYPMQDEQG 449 Query: 230 KLMLCI--VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 ++ CI D+TE+++LE+QL+ A D +TG NRR+FY + + L + S+ Sbjct: 450 EITQCIEYAVDVTERRQLEQQLQRLAETDPLTGTANRRRFYDVLTVEISRSLRHGRQLSV 509 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 L++D D FK IND GH GD +L L L R DL+ R GG+EF++L P T Sbjct: 510 LMLDLDNFKEINDTNGHDTGDRILSRLVALLGDVLRTSDLLGRSGGDEFLILAPETDAVE 569 Query: 348 ALSLAETIRVSV-AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 A LAE + V+V + + +VSIG A + D+L KR D ALYRAK GRNR Sbjct: 570 ARMLAEKLLVAVREGLRDPLAGQVSVSIGAATLLNGDGPDDLVKRADQALYRAKQYGRNR 629 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 8/277 (2%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 +P ++ + I AN A + GY + K+ I G+ + + Sbjct: 753 AVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPR-ILHSGKTTVETYAAMWT 811 Query: 196 L--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 G +++ DG+ P+ ++ L I DITEQK++E ++ Sbjct: 812 QLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQ 871 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 AH D +TGL N+ A ++L +D D FK+IND GH GDE+L Sbjct: 872 LAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELL 931 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-- 369 LA+ ++ R D + R+GG+EF+L+LP T D A +AE I +VAK Sbjct: 932 VHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELV 991 Query: 370 FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T SIG+A + D+L++ D A+YRAK DGRN Sbjct: 992 VTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRN 1028 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 11/167 (6%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL-TNSAPMLLIDPSRDGQIVDANLAA 160 + I A R + + ++ L + P L+ +G + N Sbjct: 247 KLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLKDVEGVYLSCNPMF 306 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQ 218 F+G + K ++ + H+ + + + +V DG ++ Sbjct: 307 ERFFGAIEADIVGKTDYDFVSREQADFFRAHDRAAMLADKPSINEEWVTFADDGHRACLE 366 Query: 219 TYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 T P+ +L+ L I HDITE+ +++E +T L N Sbjct: 367 TTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER------LTQLYN 407 >UniRef50_A0LBU1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBU1_MAGSM Length = 438 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 161/368 (43%), Gaps = 25/368 (6%) Query: 57 ELPKYLSDLQNQHDIIEILTVQRKEEET---ALSCRLVLRKLTETEPVIIFEGIEAPATL 113 +L + + L I ++T +E A+S + L T+P ++ + I Sbjct: 74 QLAEAIRALDTDIPI--MVTTAYNDERFFLKAISIGIDEFILKPTQPDLLSQAIAKL--- 128 Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 K ++ Q F + A +L+++ D +I AN L+F G +H M Q Sbjct: 129 -TKHIEIKRESQRHQQFVEMLLESLPAFILVVN---DSEIEHANSPFLHFLGLSH--MEQ 182 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD-----------GSTRHVQTYAG 222 +++ + +SHL L+++ + + S + Sbjct: 183 LDPKGSDIIQAICIQPNDALSHLLERGDWLSYMTQRCNILPTIQLQEPSKSRDPITCAIS 242 Query: 223 PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 + D+ +R LE +HD +TG NR + Y + Sbjct: 243 WSFDATAGRQVFAFTDLYLIQRKINDLEKKVYHDPLTGAANRSRLYEKFHEEMKRSERYG 302 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 S+L++D D FK +ND YGH+ GDEVL + + ++ R DLV RWGGEEF+L+ P Sbjct: 303 SPVSILMLDIDHFKRVNDTYGHNAGDEVLLEVVKRMQGHVRVTDLVGRWGGEEFLLIAPE 362 Query: 343 TPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKND 402 T L AL +AE IR + ++ + R T SIGV ES++ +RVD ALYRAK Sbjct: 363 TVLGAALEVAENIRRLIGQIPFGQVGRVTCSIGVGQLAKGESMNTCLERVDAALYRAKKQ 422 Query: 403 GRNRVLAA 410 GR+RV A Sbjct: 423 GRDRVEMA 430 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 164/372 (44%), Gaps = 15/372 (4%) Query: 41 TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEP 100 F +R Y + ++ +L + + + RK++ T + R + + Sbjct: 189 FFRDIRNQLYV--DPRRRDDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADG 246 Query: 101 V-IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 + +EG T +A + QR ++ + F + + LID R+ IVDAN A Sbjct: 247 LPAYYEGTVVDITDRKRAEAALATQR---AYFTQLFANSPQAIALIDMHRN--IVDANKA 301 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQ 218 +GY + + + + + L G V + DG V Sbjct: 302 FEALFGYRTADIQGFGMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVS 361 Query: 219 TYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 PIEI G+ + ++ I DI+E+K EEQ+ H A HDA+TGL NR F E + Sbjct: 362 MIGFPIEIAGETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTR 421 Query: 278 HLAIA-QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 Y++L+ID ++FK +ND GH GD++L +AR L C R D V R GG+EF Sbjct: 422 ARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEF 481 Query: 337 VLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRFT--VSIGVAHH-EGNESIDELFKRV 392 ++L +++ E I V + K + T SIG+ H + D+L + Sbjct: 482 AVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDA 541 Query: 393 DDALYRAKNDGR 404 D A+YRAK GR Sbjct: 542 DIAMYRAKEQGR 553 Score = 64.1 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 53/178 (29%), Gaps = 29/178 (16%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH----ETMCQKH 175 + + R + Y F + P+ G+ ++ N YG+ + Sbjct: 136 AEDRLRDAERKYRSIFENAVEGIFQTTPA--GRYLEVNRTLARIYGFESVAEMREFFRDI 193 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLML 233 ++ + RR + E++ + + DG+ + A + Sbjct: 194 RNQLYVDPRRRDDFVRELAA-HDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYE 252 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 V DIT++KR E L R F + ++ LID Sbjct: 253 GTVVDITDRKRAEAALATQ-----------RAYFTQLFA---------NSPQAIALID 290 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 9/127 (7%) Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI-----NMLGRR 185 + R FL + LL DG ++ AN A +G + E+ + GR Sbjct: 17 FRRVFLCSPNAALL--RDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPGRA 74 Query: 186 VMP-IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI-VHDITEQK 243 P E+ L G +G V+ P+ + GD+ + C+ DI + Sbjct: 75 DRPDEDGEVWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIASRL 134 Query: 244 RLEEQLE 250 E++L Sbjct: 135 LAEDRLR 141 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 147/341 (43%), Gaps = 38/341 (11%) Query: 105 EGIEAPATLGLKASRSANYQ--RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 E I A TL R R+ + + A+ +S ML+ID ++ N A Sbjct: 128 EVIGAIETLQDVTERRLAEAALRENEAYLAQIVDGSSVAMLVID--AQHRVTHWNRACEM 185 Query: 163 FYGYNHETMCQ--------------------KHTWEINMLGRRVMPIMHEISHLPGGHKP 202 G + + N + R + GG++ Sbjct: 186 LTGTLAKDVIGTGNQWQSFYASKRPIMADLIIDDARENAVDRLYHGRFRPSPLILGGYEA 245 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI--VHDITEQKRLEEQLEH-------AA 253 +F + S R + A P+ +++ I + D+TE++R EE L + Sbjct: 246 EDFFPHFGE-SGRWLFFTAAPLRNGAGQVIGAIETLQDVTERRRAEEALRESEERYRSLS 304 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 D++TGL N R + + + SLL++D D FK +ND YGH GD+VL + Sbjct: 305 QTDSLTGLFNSRHLHEQLPNELERAGRYGRPLSLLVLDCDNFKCVNDRYGHLGGDKVLQS 364 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPR 369 LA + C R+ D FR+GGEEFV+LLP T + AL++AE +R A + Sbjct: 365 LATAIGHCLRRSDFAFRYGGEEFVVLLPETAIQAALAIAERLRSQFASIETPAPSGDAIC 424 Query: 370 FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 TVSIGVA ES L +R D+A Y AK G+N V+ A Sbjct: 425 CTVSIGVAECVPGESEASLVRRADEACYMAKARGKNCVVMA 465 Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 25/139 (17%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM----- 190 L P+ I ++ N A G + E M + + PI+ Sbjct: 15 LVEGNPVATIVIDAQHRVTHWNRACAVLTGVSAEDMIGRS-EQWRAFYDSARPILADFVV 73 Query: 191 ----------------HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 + +P + +F G R + A I +++ Sbjct: 74 DGVNDVEVDQYYDGKSRRSALIPDAFEAEDFFPAFGHGG-RWLFFTAAAIRNADGEVIGA 132 Query: 235 I--VHDITEQKRLEEQLEH 251 I + D+TE++ E L Sbjct: 133 IETLQDVTERRLAEAALRE 151 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 20/298 (6%) Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI------NMLGR 184 Y + F N+ + L+ R+ + N E + + ++ N R Sbjct: 4 YHQIF--NTINLGLVVLDRELTVTCWNRWMELHSDIPAERIIGRKICDVFPALCENSFIR 61 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLAD--GSTRHV-----QTYAGPIEIYGDKL--MLCI 235 V + ++ K ++ + + GS+ GP+ ++ + Sbjct: 62 IVKSVFAFGNYASYSQKLHKYLFPMKNPHGSSALFPQMQQNCTFGPLRNDNKEISAIYIT 121 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 V D+T+ E +L A D +TG+ NRR + + S++++D D F Sbjct: 122 VQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHF 181 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K IND +GH GD L ++ L R D++ R+GGEEF +LP T + AL LAE Sbjct: 182 KEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERC 241 Query: 356 RVSVAKVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 R VA S R TVSIGV ++++D + KR DDALY+AK GRNRV ++ Sbjct: 242 RTQVAASQFSCTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVCSS 299 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 135/317 (42%), Gaps = 36/317 (11%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT---WEINML 182 + + Y + + +D + A GY E + + Sbjct: 318 ESEARYRMLAENSHDVIWTLDI-PSRTYTYVSPAIKEMSGYLPEETVGQPLDVRLTPDSA 376 Query: 183 GRRVMPIMHEISHLPGGHKPL-----NFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCI 235 R I + + G K DG + + + + +L I Sbjct: 377 ARAARDIDQRLRRIAAGDKAASVVVSELEQVRKDGEVITTEVVSSYLLDADGVAQTILGI 436 Query: 236 VHDITEQK---------------------RLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 +++E+K RL+ L+ A D++TGL NRR E Sbjct: 437 TRNVSERKAVESALRETNRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLERE 496 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + SL+++D D FK +ND YGH GDEVL LA TL + R D+ R+GGE Sbjct: 497 VSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGE 556 Query: 335 EFVLLLPRTPLDTALSLAETIRVSVAKVSISG---LPRFTVSIGVAHH-EGNESIDELFK 390 EF++LLP PL+T + A+ R +V +S+ FT+S+GVA + E ++ D+L + Sbjct: 557 EFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTR 616 Query: 391 RVDDALYRAKNDGRNRV 407 D ALYRAKN+GRN+V Sbjct: 617 CADQALYRAKNEGRNQV 633 >UniRef50_Q6AKT7 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKT7_DESPS Length = 660 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 159/375 (42%), Gaps = 9/375 (2%) Query: 44 QLRTGPYSVSSQKELPKYLSDLQN-QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVI 102 G + + + L L+ + I +L + + E T L L L + Sbjct: 283 PAHEGALANKTPLPVAPGLPALETENYHWILLLHLPQAEIHTILKKHLYWGLLQLGFTCL 342 Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 I + T +A + K+ +++ T L++ G + N A Sbjct: 343 IIFPLLWLLTKERIRVINARKRMKQANEFSKAIATQIGEGLIV-LDFHGNFLMINRMAEK 401 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG--HKPLNFVHKLADGSTRHVQTY 220 G+ + KH + + S + + F DG V Sbjct: 402 LLGWQEAELFHKHIGLLIPEFKESEKESLLSSTIKANACRRIEPFYIPQKDGQIIPVSLT 461 Query: 221 AGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 P+ G + I DI E+ EEQL+ AA HD+MTG NR + + + Q Sbjct: 462 ISPMYNQGTVTGAIIIFQDIAERLLAEEQLKLAASHDSMTGAKNRAELERLMDLEIEQSA 521 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 + L+ID D FK IND YGH GD+VL ++ + S RK D+ R+GGEEFV++ Sbjct: 522 RKKTACTFLMIDIDYFKKINDSYGHLVGDQVLKEMSHYIRSTLRKSDIFGRYGGEEFVII 581 Query: 340 LPRTPLDTALSLAETIRVSVAKVSISG---LPRFTVSIGVAHH-EGNESIDELFKRVDDA 395 LP+ L + +AE +R+ + + S+ TVSIG+A + E + ++ + D+A Sbjct: 582 LPQEDLQHSRKIAERLRLGIKENSLQNNTLKKAMTVSIGLASYPEHGRTSKDILLQADEA 641 Query: 396 LYRAKNDGRNRVLAA 410 LY AK GR+R++ A Sbjct: 642 LYIAKKQGRDRIVTA 656 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 18/316 (5%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPML---LIDPSRDGQIVDANLAALNFYG 165 A + + Q+ ++ L + + + + + AN +AL+F Sbjct: 713 AVIAMRDVTAERKTKQQLQEALVEAQRLRAALDQVSSHIYMKDLQFRYIYANRSALDFVD 772 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEI-SHLPGGHKPLNFVHKL--ADGSTRHVQTYAG 222 + E + K + ++ I S + G + +H + DG R Sbjct: 773 RSLEEILGKD--DFFFFSEEAAKLLQAIDSRVFQGEQTTEEIHLVNPKDGQLRVYLEIKT 830 Query: 223 PIEIYGDK----LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 PI +L I DITEQK+LE++L+ A DA+TG+LNRRQF + + + Sbjct: 831 PIYESAQSSNIIGLLGISTDITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRI 890 Query: 279 LAIAQD--YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 I +D SL++ID D FK IND YGH+ GD+VL + R+ D+ R GG+EF Sbjct: 891 YRIQRDTSLSLVIIDIDHFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEF 950 Query: 337 VLLLPRTPLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHEGN-ESIDELFKRV 392 VL+LP T A + + IR V + S+ T+S+G+A ++D+ +R Sbjct: 951 VLMLPETNGKQAYQVMDRIRQLVIQQSLHLPQQAIAITISVGIAVWTPEILTLDQFLERA 1010 Query: 393 DDALYRAKNDGRNRVL 408 D ALY+AK GR+R++ Sbjct: 1011 DRALYQAKQQGRDRII 1026 Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 63/165 (38%), Gaps = 4/165 (2%) Query: 89 RLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPS 148 +L +L ++I + + ++ +++Q + F + +L+ S Sbjct: 183 QLSFLQLATDFQLLITSTLWTFGLILTVNQQAIAVSKEEQATTEQIFDVSPDAILITQLS 242 Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFV 206 DG IV N + L E + + ++N + I L G + L Sbjct: 243 -DGLIVRVNQSFLELIDQPKENVIGRSILDLNFW-KNQHDRSRMIDCLLSQGSCEDLEVG 300 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + D S Q A I+I ++ +HD+T++++ E+ L Sbjct: 301 LQRPDQSNFIGQVTAKLIKINSKFHIISTIHDVTQRRKSEDLLRQ 345 Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 14/192 (7%) Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 Q + +E+ + + L K+ I + + +S + R Sbjct: 291 QGSCEDLEVGLQRPDQSNFIGQVTAKLIKINSKF------HIISTIHDVTQRRKSEDLLR 344 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK--HTWEINMLG 183 + + F + A + D + + +L GY + K + + Sbjct: 345 QSEERLELAFQGSLAAIW--DWDLVTSDLYFSSRSLEILGYQEGDIPPKISSFFSLLHPD 402 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEIYGDK--LMLCIVHDI 239 R+ +H P + +++ G R Q+ + +K M+ DI Sbjct: 403 DRIFVQSALDAHFSSAKYPYDVEYRIQQKSGEYRWFQSTGIAVRDEQNKPYRMVGSTIDI 462 Query: 240 TEQKRLEEQLEH 251 T +K+ EE L Sbjct: 463 TRRKQAEEALRE 474 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 5/140 (3%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + ++ R+ + Y + NS +L+ ++G N LNF G + E Sbjct: 463 TRRKQAEEALRESEQNYRT--VVNSGHVLIWLADKNGDHYYFNSVWLNFTGRSLEQELDS 520 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKP-LNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 + E + + + + + + + DG R + P + Sbjct: 521 GSIEGVLSADLQSYLSNYRTAFSQHNSYKAEYRLRRHDGEYRWILEEGSPRYDTHGNFIG 580 Query: 234 CIVH--DITEQKRLEEQLEH 251 I H DI ++K E L Sbjct: 581 YIGHCLDIHDRKIAETALYR 600 >UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9J2_VIBHO Length = 498 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 13/281 (4%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + ++P I G I+ +N A + +GY+ + + ++ ++ + Sbjct: 209 IFQASPDAFIYSDSKGNILRSNQMASDIFGYSALELKKLKIEDLVEPTKQEYHENLRETF 268 Query: 196 LPGGHKPL------NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 + G + + G + + + I+ DIT+ KRLE Sbjct: 269 VKQGGRRMMGGRNTEIKGVTKSGKRVPLSIAISSFSFEEHQGSIAIIRDITDFKRLESD- 327 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 + HDA+TG+ NRR E + A+ SLL++D D FK++ND GH GD+ Sbjct: 328 ---SMHDALTGVYNRRHIEERFEDEVKRAKRYARALSLLVVDLDNFKNLNDTEGHRAGDK 384 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR 369 L A L S RK D + RWGG+EFV++ P A+ +AE IR + Sbjct: 385 GLVVAAEHLRSQLRKHDHIGRWGGDEFVVICPELDRADAIEIAERIRRRFEAQQFPWCHK 444 Query: 370 FTVSIGVAHHEGNESI---DELFKRVDDALYRAKNDGRNRV 407 T+SIGVA + S+ +LF+ D ALY AK GRNRV Sbjct: 445 MTMSIGVASLSPDTSVMTPRDLFEEADQALYLAKERGRNRV 485 >UniRef50_C4K9W4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thauera sp. MZ1T RepID=C4K9W4_THASP Length = 710 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 88/306 (28%), Positives = 131/306 (42%), Gaps = 13/306 (4%) Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPS-RDGQIVDANLAALNFYGYNHETMC-QK 174 R ++ + A + L D G+ + + GY E + Sbjct: 382 TERRRVREQIAERERRLMLALEGAELGLWDWDVPSGR-ANFSPMWCRMLGYAAEELPANV 440 Query: 175 HTWEINMLGRRVMPIMHEIS-HLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDK- 230 +WE + I + HL G + K G V ++ Sbjct: 441 SSWESLVHPDDWYDIRDSLEPHLRGTKDAYRAEYRLKHKSGHWVWVLAAGRVLDRGEGGE 500 Query: 231 --LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 M+ I DI+++K +EE L A D +TGL NRR F + + +LL Sbjct: 501 ALRMVGIHQDISQRKAMEESLLQLATSDPLTGLWNRRHFVEVVRGELGRVRRNQAPAALL 560 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 L+D D FK IND +GH+ GDEVL T+ + R+ D+ R GGEEF +LLP A Sbjct: 561 LMDLDFFKRINDTHGHAAGDEVLRHFTATVSAQLREADVFARLGGEEFAVLLPSIDALGA 620 Query: 349 LSLAETIRVSVAKVSI---SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 + A+ +R VA SG ++VSIG + +E + + R D+ALY AK+ GR Sbjct: 621 VRAADRLRRVVADSPASVDSGALHYSVSIGATMLDAADEGYEAAYARADEALYAAKHAGR 680 Query: 405 NRVLAA 410 NRV+ A Sbjct: 681 NRVVLA 686 Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L +S P L+ R+G+ + N A YG + + E+ + + Sbjct: 279 LIDSVPDLIAFRDREGRYLGCNKAFAEAYGIREAALVGRSDGELFAGRLPLAGAGQDTVS 338 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEH 251 H+ + ADG+ R + T P + + + D TE++R+ EQ+ Sbjct: 339 CAENHEEW---LEAADGTLRLLDTLRTPYFDLDGVQLGEIRVSRDFTERRRVREQIAE 393 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 12/308 (3%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM-C 172 + ++A Q +K R L + G++ A+ GY + Sbjct: 241 DITELKNAEAQLRKSEDRMRLALVAANQAWFDLDIATGEMT-ASDEYPQILGYAAGELDH 299 Query: 173 QKHTWEINMLGRRVMPIMHEI-SHLPGGHK-PLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 W+ + +M + L GG +++ + G + + E Sbjct: 300 SLQEWQAALHPEDSARVMSLLNECLAGGDSASIDYRRRAKSGDWVWMNSVFKIAEFNALH 359 Query: 231 ---LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 M+ + +I +K LE +L AH D +T L NR F E + +D ++ Sbjct: 360 QPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAM 419 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 ++D D FK IND +GH GD VL LA R+ D++ R GGEEF +LLP T Sbjct: 420 FMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAE 479 Query: 348 ALSLAETIRVSVAKVSIS---GLP-RFTVSIGVAH-HEGNESIDELFKRVDDALYRAKND 402 AL +AE +R++VA + GLP ++TVSIGV+ +++ID L R D ALY+AK Sbjct: 480 ALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQAKQS 539 Query: 403 GRNRVLAA 410 GRNRV AA Sbjct: 540 GRNRVCAA 547 >UniRef50_C5V4E8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4E8_9PROT Length = 1302 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 20/315 (6%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH-ETM 171 + + + A Q + R + N P + G++ N A L + + Sbjct: 982 IDISERKLAEAQLVESESRLRAIIEN-EPECIKIVDAQGKLTQMNPAGLKMIEADSLAQI 1040 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 + E+ R L G + F G R ++T+A P++ YG + Sbjct: 1041 AGHNILELIAPEYRQEFSRMHQRVLAGETVQMEFEILGLKGGRRVLETHAVPMKEYGQTV 1100 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 L + DITE+K+LE + A +D +T L NRR M + +L+ +D Sbjct: 1101 QLAVTRDITERKKLEADIHQLAFYDTLTHLPNRRLMNERLAHAIMASRRSERYCALMFLD 1160 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD----- 346 D FK +ND +GH GD +L +AR L++C R+ D V R+GG+EF ++L + Sbjct: 1161 LDNFKPLNDTHGHVVGDALLVEVARRLKTCVREIDTVSRFGGDEFTVMLSELDVTLSDSV 1220 Query: 347 -TALSLAETIRVSVAKVSISGL-----------PRFTVSIGVAHHEGNES-IDELFKRVD 393 A ++AE IR S+A+ + + +VSIG+A G+++ DE+ K D Sbjct: 1221 MQAQTIAEKIRGSLAEPYLLTIRHEGVADTIVKHHCSVSIGIAVFIGHDAEGDEILKWAD 1280 Query: 394 DALYRAKNDGRNRVL 408 A+Y+AK GRN++ Sbjct: 1281 AAMYQAKAAGRNQIC 1295 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 84/253 (33%), Gaps = 32/253 (12%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEIL 75 + IV + +I+AN A + +M + G + ++ + N +E+ Sbjct: 755 IGIVRVKDRTIIWANPAYEKIMG---YQP---GEMTGMPTRQ------NFANDKSYLELG 802 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVII--FEGIEAPATLGLK--ASRSANYQRKKQGFY 131 V E+ R L + + I G +T G A +++ + Sbjct: 803 KVAYPLLESGKVFRAQLEHVCKNGQRIWVDMSGSMLNSTRGESLWAFLDITDRKRTETIL 862 Query: 132 ARFFLTNSAPMLLID-----PSRDGQIVDANLAALNFYGYNH-ETMCQKHTWEIN----- 180 L ++ + + +G N + L GY H E + H E+ Sbjct: 863 QATNLKMNSLLSSMAEGAYGIDTNGHCTFVNPSFLRILGYEHAEEVIGAHIHELIHHSHA 922 Query: 181 ---MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCIV 236 + + H + DGS V+ +A PI I G ++ Sbjct: 923 DGTIYPAAECKMYMAYQKNEKAHSVDEVFWRR-DGSAIPVEYWAQPIVIDGVITGVIATF 981 Query: 237 HDITEQKRLEEQL 249 DI+E+K E QL Sbjct: 982 IDISERKLAEAQL 994 Score = 64.8 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 3/141 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L + + ++ + ++ + A I S G ++ N A +GY+ + + Sbjct: 605 RLRREIDQRKILEKSVEENREKYRALSEAAFEAIFISEHGLGLEQNRQASALFGYSDQEI 664 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 K E R + + H +S G P + +G+T + G + Sbjct: 665 IGKPGIEFIAEKDRAL-VKHNMS--SGYELPYEALCLHKNGATFPAIICGKMMHYRGRDV 721 Query: 232 MLCIVHDITEQKRLEEQLEHA 252 + + D+TEQK E Q+ Sbjct: 722 RVTSITDVTEQKNREAQIRTM 742 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 7/144 (4%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSA----PMLLIDPSRDGQIVDANLAALNFYGYNH 168 + + + Q+ ++ A ++ I +D I+ AN A GY Sbjct: 721 VRVTSITDVTEQKNREAQIRTMLSEQKAMLENDLIGIVRVKDRTIIWANPAYEKIMGYQP 780 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEI 226 M T + + + + L G H +G V + Sbjct: 781 GEMTGMPTRQNFANDKSYLELGKVAYPLLESGKVFRAQLEHVCKNGQRIWVDMSGSMLNS 840 Query: 227 YGDKLMLCIVHDITEQKRLEEQLE 250 + L DIT++KR E L+ Sbjct: 841 TRGE-SLWAFLDITDRKRTETILQ 863 >UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RR7_SULDN Length = 427 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 17/395 (4%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQ-KELPKYLSDLQNQHDIIEILTV 77 + Q Y + K+L + +++T + + + + + ++ Sbjct: 45 ILGKNLQEFYPDINYKVL-----YRKIKTALTIGTPTFYDTNSSKKFISINRNKVTTSSL 99 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 + +++ +S ++E+ +I I L + N K Sbjct: 100 KLMQQQVTIS----PYIISESRVMISIYDISELFEAKLLIKKEMNKVNKLNEKLEADRDI 155 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 ++++ S +G I D + + + + + + K+ + + I L Sbjct: 156 IDKNIMVMKTSANGFIKDVSSFFCDSFNISKDELIGKNVSIFKSDDISDIVYRNLIETLK 215 Query: 198 GGH-KPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLML-CIVHDITEQKRLEEQLEHAAH 254 +K + + +Q+ PI +++G+ L + HDIT +K L E Sbjct: 216 NKKPWNGELKYKTSKNQEKWLQSRVVPILDLHGEVHELNAVYHDITNEKLLAE----LYI 271 Query: 255 HDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D++T L NR F D+ L+L+D D FK IND YGH GDEVL A+ Sbjct: 272 TDSLTKLYNRAYFDETINMIVKHQRKADSDFILVLVDIDHFKLINDTYGHQVGDEVLVAI 331 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSI 374 A+TL+ R DL+ RWGGEEFV++L L+ A ++ E +RV++ I + T S Sbjct: 332 AKTLKGSLRDNDLIARWGGEEFVIMLKNITLNEAKTIIEKVRVNIQNSIIRDNIKVTASF 391 Query: 375 GVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 G+ + NE E+FKR DDALY AK DGRNRV+ Sbjct: 392 GLTKYIINEDSKEIFKRADDALYEAKKDGRNRVVV 426 >UniRef50_C6MQF9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MQF9_9DELT Length = 705 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 10/307 (3%) Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL-IDPSRDGQIVDANLAAL 161 I + + TL +R R + ++ F + P LL I +DG++V+ N A L Sbjct: 123 ILDRVGEKLTLRRLVARQVAALRASEQRFSTIF--QATPDLLSIASLQDGRLVEVNEAFL 180 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPI-MHEISHLPGGHKPLNFVHKLADGSTRHVQTY 220 G++ + + + E+ + P + + G + L K +G Sbjct: 181 RALGFDRQEVIGRTPEELGLWLDAGEPAALLQALAEKGAVRDLEVRLKAKNGQELEGLVS 240 Query: 221 AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 A IE+ G+ +L + DI+E+KRLE+ ++H A HD +T L NR+ F Q Sbjct: 241 ADSIEMEGNPFLLTLFKDISERKRLEQIIKHQAQHDPLTDLPNRKLFMDFLALELAQARR 300 Query: 281 IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL 340 + ++L +D D FK IND GH+ GD +L A+A+ L+ C R+ D V R GG+EF +L+ Sbjct: 301 NKKSLAVLFLDLDHFKQINDTLGHAAGDLLLQAVAQRLKRCVRESDTVARIGGDEFNVLM 360 Query: 341 PR-TPLDTALSLAETIRVSVAKVSISGLP---RFTVSIGVAHH-EGNESIDELFKRVDDA 395 P D ++ I + V + + S+GV+ + ES +EL ++ D A Sbjct: 361 PDLAQTDDVGTVVSKI-MGVFGPPFRLEGIEVQASTSLGVSMFPDDGESCEELLQKADGA 419 Query: 396 LYRAKND 402 +Y AK Sbjct: 420 MYVAKQS 426 >UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSP1_THISH Length = 882 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 92/367 (25%), Positives = 148/367 (40%), Gaps = 24/367 (6%) Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK------ 116 L H +E ++Q E + + K + FEG + Sbjct: 519 RFLSVVHKALETSSLQTLEYALSAEQISIPPKGGPDG-TLWFEGRVMAMGARVFDRPAVI 577 Query: 117 -ASRSANYQRKKQGFYA---RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 + + +++ + R F ++ + + D +I+ AN A GY + Sbjct: 578 WLAMNVTARKRLEESMRLNARVFEDSNEGIFITDAG--NRIISANTAFTRITGYEAAEVI 635 Query: 173 QKHTWEIN--MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 ++ ++ M + E L G ++ DG + + Sbjct: 636 GRNPGLLSSGMHDEAFYQSLWEQVLLHG-RWEGEIWNRRKDGRVYPQNLSISVVRDGEGR 694 Query: 231 LM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + + I DIT +K E Q+ H A HD +TGL NR Q +LL Sbjct: 695 ISHHIAIFSDITRRKEAEAQIRHMALHDNLTGLANRTLLRDRLTQAIEQARRDRNSLALL 754 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT- 347 ID D FK +ND +GH GD VL +A+ L + R+ D V R GG+EFV+LL + Sbjct: 755 FIDLDDFKPVNDTHGHEAGDRVLKEVAQRLRAAVRRVDTVARMGGDEFVILLQALEQEDM 814 Query: 348 ALSLAETIRVSVAKVSISGLPR---FTVSIGVA-HHEGNESIDELFKRVDDALYRAKNDG 403 A+ +AE I S+++ I + S+G+A H E D L + D ALY+AK+ G Sbjct: 815 AIQVAEKIIDSLSR-PIQLNGQTCLLGASVGIALHPRHGEDHDGLMRAADQALYQAKSAG 873 Query: 404 RNRVLAA 410 +NR A Sbjct: 874 KNRYQVA 880 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 R+ + Y S ++ +DG + N + +G++ E + H ++ Sbjct: 333 RQSEVKYRALMENLSDGACIV---QDGWLRYVNPRFRDIFGHD-EELLLSHQLSDFLVAE 388 Query: 185 RVMPIMHEISHLPG-----GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 + +S + G + D +V+ + +L V DI Sbjct: 389 DRDQLARLMSRVIADPARPGPLETELRIRTGDAGHSYVRINLSAMAWEDGPAILATVSDI 448 Query: 240 TEQKRLEEQL 249 ++KRL QL Sbjct: 449 DDRKRLANQL 458 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 20/300 (6%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM----- 181 +Q + + F ++ + L+ R+ ++ N G + + + + ++ Sbjct: 2 RQREFTQIF--DTVNIGLVILDREMRVCHWNRWMATRSGISADKIIDQSLFDFFPHLKTP 59 Query: 182 -LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTR--HVQT-----YAGPIEIYGDKL-- 231 + M ++ + K ++ S H GP+ + + Sbjct: 60 TFNKNCMAVLSFGNFAFFSQKLHRYLFPFKPDSYFGCHFDLMQQSCTMGPLRDEDNAITS 119 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + IV D+TE E++L DA+TG+ NRR + ++ ++ +SL++ID Sbjct: 120 LFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLMMID 179 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK +ND +GH GD VL +A + RK D + R+GGEEF LLP T D A ++ Sbjct: 180 IDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAAETV 239 Query: 352 AETIRVSVAKVSI---SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 AE +R + + + R T+S+G+A ++S + L KR D+ALY+AK GRNR + Sbjct: 240 AEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRSGRNRFV 299 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 8/258 (3%) Query: 160 ALNFYGYNHETM---CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRH 216 GY + + I+ E + G + G RH Sbjct: 307 FCRILGYPPDAVDPDFNLFMHHIHPDDEPAFRENFEAAQATGHEFTTELRIRTVQGEERH 366 Query: 217 VQTYAG--PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 V G +E + + D+TE++ E +LE A+ D +TGL NRR F Sbjct: 367 VSLVCGFDLLEDGSMFRLHGAMADVTERRLAELRLERLANTDELTGLPNRRHFLECVRAE 426 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + + + ++D D FK +ND +GH GD L +A+T+ R D+V R GGE Sbjct: 427 MTRSRRFGKSLCVAMVDIDDFKKVNDTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGE 486 Query: 335 EFVLLLPRTPLDTALSLAETIRVSVAKVSISG---LPRFTVSIGVAHHEGNESIDELFKR 391 EF +L P L ++ AE +R ++A+ + R TVSIG+A + G+ES+D L +R Sbjct: 487 EFCVLFPEAGLAAGITAAERVRKALAEAVLEHGDLRLRLTVSIGLAEYSGDESLDGLLRR 546 Query: 392 VDDALYRAKNDGRNRVLA 409 D+ALY AK G+NRV + Sbjct: 547 SDEALYEAKRTGKNRVCS 564 Score = 42.5 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 5/157 (3%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 ++ G A + + Y R ++S+ L+ D N + L Sbjct: 125 LVSHGSIDGAVVSHIQITARKLAEAALVRYERAIASSSS--LVSIIDSDFVYQLVNDSYL 182 Query: 162 NFYGYNHETMCQKHTWEI---NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ 218 + + + + EI ++ + V P + F K AD V Sbjct: 183 RVHRKARDEIEGRKVAEIVGQDVFDKHVGPKLTRCFAGETVEYEAWFDTKWADRRCYAVT 242 Query: 219 TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHH 255 Y + DITE KR+++++ ++A Sbjct: 243 YYPYRERDDSISGAVVTATDITEAKRMQDEIANSARR 279 >UniRef50_C4KDN7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KDN7_THASP Length = 583 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 94/328 (28%), Positives = 146/328 (44%), Gaps = 18/328 (5%) Query: 91 VLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG------FYARFFLTNSAPMLL 144 V R E E +I +E A ++R +Q Y F + + ++L Sbjct: 250 VRRINAEQERLIERRTVELAEANRRLAGEVDLHRRSEQRLAASESRYRAIFDSAAEGIML 309 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGGHKP 202 +D + +IV N A GY E + + + GR E+ + G Sbjct: 310 LDAAL--RIVQVNPAFCEITGYAAEEVLGRKPSMLGS-GRHDRAFFRELLATLAAAGRWQ 366 Query: 203 LNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 ++ DG A I E + + + DIT +K+ EE+L A+HDA+TGL Sbjct: 367 GEVWNRRKDGDLYVQWMSAVRIGEADAPEGFVATMTDITSRKQTEEKLRFRANHDALTGL 426 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NRR F + L + ++L+L+D D FK +ND +GH GD +L + R LE C Sbjct: 427 PNRRLFEDRLQSAIASALRHGERFALMLVDLDHFKGVNDRFGHLAGDALLVEVGRRLELC 486 Query: 322 ARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI---SGLPRFTVSIGVA 377 R D V R GG+EF ++L + A +AE I ++A + G+ S+G+A Sbjct: 487 VRASDTVARLGGDEFAVILGEVGGREDAAEVAERICAAMA-LPFELGEGVAHIGASVGIA 545 Query: 378 H-HEGNESIDELFKRVDDALYRAKNDGR 404 + + EL +R D ALY K+DGR Sbjct: 546 LGPQDDADAGELQRRADAALYAVKHDGR 573 >UniRef50_B9Z7T9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7T9_9NEIS Length = 770 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 10/291 (3%) Query: 119 RSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + K + + ++P ++ + +IV N A GY+ + + Sbjct: 462 EDVTERHKNEAGMRLASTVFMASPTGIMVTDAEERIVSVNPAFTLITGYSAAEIIGQTPK 521 Query: 178 EINMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--L 233 I G+ E+ G G +++ G + +++ + Sbjct: 522 -ILASGQHDADFYQELWRSIGQDGFWEGELLNRHKQGHLYLEMISISRVVDGQGRVVNYV 580 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 + D+TE+++ EE++ H AHHD +TGL NR + ++L +D D Sbjct: 581 GMFQDVTERRQAEERIRHLAHHDYLTGLPNRAHLLERASQALALARRYQRRLAILFLDLD 640 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 RFK IND YGH GD VL +A L + R+ D V R GG+EFV+LL + LA Sbjct: 641 RFKPINDRYGHDVGDVVLRTVADRLLALVRESDTVCRLGGDEFVILLAEYHDFASVEQLA 700 Query: 353 ETIRVSVAKVSISGLPR--FTVSIGVAHH-EGNESIDELFKRVDDALYRAK 400 T+R ++ + G R + SIG+A + E +S+ L +R D A+YRAK Sbjct: 701 HTLRTAIEQPCEVGALRLAVSASIGIATYPEHGDSVGALIQRADAAMYRAK 751 Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 7/177 (3%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 L+ +VL L ++ + A +AS + + ++Q + ++S + Sbjct: 306 RIVLASGIVLTLLLVAASQLLGRSHQRLAAALREASLANRHLAEQQSLLRAIYDSSSVAL 365 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR--VMPIMHEISHLPGGH 200 L+ P DG+I AN + + + + + +S G Sbjct: 366 FLMKP--DGKIAHANQRMAAMFHTLLPELIGRDYDTLLPPAEQDGARDWQARVSAQQGTP 423 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHH 255 + ++ DG T + G ++ ++ ++ D+TE+ + E + A Sbjct: 424 ASIERCYRRFDGGEFWGVTTGCALHDAGGRVLGIVGVIEDVTERHKNEAGMR-LAST 479 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 10/300 (3%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 R + R+ + A F ++A L+ + DG+++ N A GY+ E Sbjct: 169 TVIRRETDAVREGEERLATFL--DTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAV 226 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 ++I R E+ + G P+ V DG + V+ + + Sbjct: 227 PFFDILHPDSR-EQCCAELQRVVSGDALSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSV 285 Query: 233 L-CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + I DITE+K EEQL AHHD +TGL NR F + + ++L +D Sbjct: 286 IWSICRDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLD 345 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL-DTALS 350 DRFK IND GH GD +L +A + C R+ D V R GG+EF ++L + Sbjct: 346 LDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKR 405 Query: 351 LAETIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 + + I ++A T SIG++ +++D+L K+ D A+Y K +GRN V Sbjct: 406 MGQKILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNV 465 >UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZJQ2_THASP Length = 1050 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 126/305 (41%), Gaps = 10/305 (3%) Query: 110 PATLGLKASRSANYQRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L A + +++ + + +S+ ++ D +IVD N A GY+ Sbjct: 462 RALLLTGAQIDIDRRKENEERLRLAASVFSSSYEAILITDVDNRIVDVNPAFCRITGYSR 521 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEI 226 E + + GR+ + H ++ DGS + Sbjct: 522 EESLGRDPGML-ASGRQGREFYRAMWQAIEEHDHWQGELWNRRKDGSEFAEVLSISRVRD 580 Query: 227 YGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 +++ L + DI+ K+ EE+L A+ D +TG NRR + Sbjct: 581 ARGRVIHHLAMFSDISRLKKHEEELNRIAYFDPLTGAPNRRLLDDRLRQAIAHSRRTGKP 640 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 ++ +ID D FK +ND GH GD+VL + L + R D V R GG+EFVLLL Sbjct: 641 LAVCVIDLDGFKPVNDQLGHEAGDQVLIGIVDRLGAILRASDTVARLGGDEFVLLLEDIE 700 Query: 345 LDTALS-LAETIRVSVAKVSISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKND 402 + L + E IR +A S + SIGV ++ D L + D A+YRAK Sbjct: 701 GERVLERVLEAIRTPIALA--SQQVCVSASIGVTLFPEDDADPDTLLRHADQAMYRAKQR 758 Query: 403 GRNRV 407 GRN + Sbjct: 759 GRNCI 763 >UniRef50_Q2RT37 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RT37_RHORT Length = 519 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 158/380 (41%), Gaps = 8/380 (2%) Query: 34 KLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLR 93 K++ DL S LR + + + + +D + + T L L Sbjct: 134 KVIRDDLGNSHLRIVLRTGQPGQAPEHDVVMRYDINDYRSKTELTDTKLITTLVSSLRSY 193 Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 + E E EA TL ++ + R+ + + P+L++ D ++ Sbjct: 194 QQIEALERSRAELREARDTLEIRVAERTRDLRESEARLRSILDASVFPILVLSEEGD-RV 252 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL--NFVHKLAD 211 N A G+ + + T + L + ++ + L F + A Sbjct: 253 RFLNDHAGEALGW---ALLENTTSTLPDLWENPVDGARLLARTVQRGRVLDCEFRLRGAG 309 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 G + G +L +DIT K+ EE + A D +TGL NRR + Sbjct: 310 GEPFWALVSTIAMSYDGQPAVLLSFNDITVHKQREEAWQRLALTDPLTGLGNRRLLFDRG 369 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 + S L+ID D FK IND GH+ GD +L LA TL R+ D++ R Sbjct: 370 ILEVARARRGCWPLSGLMIDLDHFKRINDTQGHAAGDAILRTLADTLRESLREIDVIARV 429 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNE-SIDELFK 390 GGEEF +LLP T L A + E +R+S ++ T+S+G++ + + ++ Sbjct: 430 GGEEFAILLPDTSLTAAHEVGERLRLSC-QIPQPVGGPVTISVGISTLHPEDRGLGDMLS 488 Query: 391 RVDDALYRAKNDGRNRVLAA 410 R DDALYRAK +GR+RV A Sbjct: 489 RADDALYRAKRNGRDRVEIA 508 >UniRef50_C5V5L2 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5L2_9PROT Length = 560 Score = 270 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 93/358 (25%), Positives = 154/358 (43%), Gaps = 10/358 (2%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKA 117 P+ L +Q + E L C+ K + + V+ F+ P + Sbjct: 191 PEDLPKVQADVAAYFAGALPAYFNEHRLLCKDGRWKWILDRGRVVSFDAAGEPLRMIGTH 250 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + ++ ++ + N+ ++ D +IV N A GY E + K+ Sbjct: 251 TDIDMLKQAEEMLNLSSTVFNTVDEAILVCDADNRIVMVNPAFTRVTGYQAEEVIGKNPH 310 Query: 178 EINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 ++ G+ ++ G ++ +G + + KL + Sbjct: 311 LLSS-GKHDADFYRQLWAQLTCTGSWCGELWNRRKNGELYVEWSTIKQVRDPHGKLTHYV 369 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 DIT +K EE + H A HDA+T L NR +L+ +D D Sbjct: 370 AAFSDITLRKADEENIRHQAQHDALTDLPNRVLLIDRLRQALSLAKRDKMHLALMYLDLD 429 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 +FK +ND GH+ GD +L +A + SC R+ D V R GG+EFV+LL + AL++A Sbjct: 430 QFKPVNDTLGHAVGDLLLQEVAARIRSCVREADTVARMGGDEFVVLLTSSEDQRDALTVA 489 Query: 353 ETIRVSVAKV-SISG-LPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRV 407 E IR+++ +V ISG + + S+GVA + E S EL + D A+Y AK GRN+V Sbjct: 490 EKIRIALEQVFQISGARLQISSSLGVAVYPEHGASEHELLEHADIAMYYAKQSGRNQV 547 >UniRef50_Q083J4 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Gammaproteobacteria RepID=Q083J4_SHEFN Length = 294 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 9/272 (3%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK 201 + + G V + A + +GY+ + + K + ++ + + + L G K Sbjct: 18 DAVCVVDKAGTFVFVSAAFEDIFGYSPDEVIGKPMID-HVYSEDGIKTLKVVESLMEGKK 76 Query: 202 PLNFVHK--LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMT 259 F ++ DG + A E + + + I HDITE+K +E+QL + A HD +T Sbjct: 77 QPRFENRWVRKDGKIIDILWSARWSEDH--QFRIAIAHDITERKLMEQQLHYIAGHDPLT 134 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 L NR + + SLL ID D FKH+ND YGH GD++L +A+ L Sbjct: 135 ELPNRALLFGRLQTSLGLARREGSHLSLLFIDIDGFKHVNDSYGHLVGDKLLKNIAQRLR 194 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETIRVSVAKV-SISGL-PRFTVSIGV 376 C RK D V R+GG+EFV++L D L + E IR + K L + + SIGV Sbjct: 195 DCVRKSDTVGRFGGDEFVVVLNGIDSFDNVLVITENIRAQLEKTYQFDDLNLQLSPSIGV 254 Query: 377 AHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 A + + +L + D A+YRAKN G NRV Sbjct: 255 ARYPDNGDDEQQLLQYADQAMYRAKNAGGNRV 286 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 90/332 (27%), Positives = 137/332 (41%), Gaps = 27/332 (8%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM-LLIDPSRDGQIVDANLAALNF 163 E A GL+ + + + + L ++AP L++ DG I AN A Sbjct: 305 EERLRRANHGLEEKVAERTAQLAESEARQKQLVDAAPFPLVLSRLSDGVITYANERAERM 364 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP 223 + + + + + + + G + + G Sbjct: 365 FKGRLRSTQGLTVDDF-YVSTQTRDEVAALMRDKGQLRDHEVRLQDTGGRVFWALISCTL 423 Query: 224 IEIYGDKLMLCIVHDITEQKRLE----------EQ-----------LEHAAHHDAMTGLL 262 + G ++ ++DI+E+KRLE Q L+ D +TG+ Sbjct: 424 VRSAGTLHVITGINDISERKRLEHSLKTANEALRQHLNEIESLQSGLKEQLVRDPLTGVF 483 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NRR LA+ + +LL++D D FK IND YGH GD VL L L Sbjct: 484 NRRYLDDALPRVLAHTLALGKPVALLMLDADHFKRINDTYGHKAGDCVLSTLGARLRDSL 543 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR---FTVSIGVAHH 379 R D+V R+GGEEF+++LP L+ A++ AE +R V + I L TVSIGVA Sbjct: 544 RSNDMVCRYGGEEFLIVLPGMSLEHAIAKAEQLRKVVQQWPIEALDHTLNVTVSIGVACS 603 Query: 380 E-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E + L D ALY AK+ GR+R+ A Sbjct: 604 PLHAEDAESLVHAADTALYVAKSSGRDRLCVA 635 >UniRef50_A1TGQ8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1TGQ8_MYCVP Length = 448 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 17/347 (4%) Query: 70 DIIEILTVQRKEEETALSCRLVLRKLTET-EPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 + E T+ +++ + + + + + ++ + I+ T L A R + + Sbjct: 112 EFFEGSTINYRKDGLSYVVQWNISPVRDADGAIVAYVSIQQDITARLAAERERSLLAE-- 169 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML---GRR 185 N+A +I ++ IV AN A G + + +E+ G Sbjct: 170 -------ALNAATDPVIVMDKNFIIVFANNAFGREVGRPVDDILGHSAFELRPRTAEGLA 222 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQK 243 I ++ H ++F G HV + Y D + I +IT Sbjct: 223 EPQIRRVLAEGSPYHGVVSFEAPT--GKRLHVDLSISSLIGYHDPNGHYVAIAPNITHMV 280 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 + L+ A+ DA+TGLLNRR E + S+ + D D FK IND G Sbjct: 281 EQQMVLQEMANMDALTGLLNRRSGQIALEIELQKAAESGAPISVAMGDIDHFKRINDRLG 340 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H+ GD+VL ++A +L R+ D+ RWGGEEF++ LP TPLD A+ L E IR VA Sbjct: 341 HAVGDDVLRSVAGSLRDGLRRNDVAIRWGGEEFLVFLPNTPLDDAVPLTERIRNHVATTP 400 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 T+S GV ES+ +R+D A+Y AK+ GR+RV+++ Sbjct: 401 QIASDSVTMSFGVGQWRPGESVAAFVERIDAAMYEAKSGGRDRVVSS 447 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 12/155 (7%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ--IVDANLAALNFYGYNHETM 171 G+ +A + F M++ D DG N A GY E + Sbjct: 24 GVMGREAAGLNLHGEAMLDAVFEHLYNAMVITDADFDGGPFFQRCNPAFCAMTGYTEEEL 83 Query: 172 CQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + + ++ E+ G + ++ DG + VQ P+ Sbjct: 84 IGQSPRILQGP-ETDRKVIDELERKIRAGEFFEGSTINYRKDGLSYVVQWNISPVRDADG 142 Query: 230 KLM--LCIVHDITEQKRLEEQLEHAAH-----HDA 257 ++ + I DIT + E + A D Sbjct: 143 AIVAYVSIQQDITARLAAERERSLLAEALNAATDP 177 >UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NQ9_SYMTH Length = 720 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 86/326 (26%), Positives = 131/326 (40%), Gaps = 12/326 (3%) Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ-RKKQGFYARFFLTNSAPMLL 144 S L ++ + E + L + + ++ + + F + L Sbjct: 132 KSGELFPAQIAIARVAMDDETLFLAVVQDLTERKETERRLKESEERFRLAFEHAPIGVAL 191 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLN 204 +D G I++ N A GY + + ++ +HL Sbjct: 192 LDAG--GAILEVNRALCAMLGYAPAELAGRPLTDLAAHPGAFPDP----AHLQSAGPAPE 245 Query: 205 FVHKLADGSTRHVQTYAGPIE-IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 + DG T Q + D + + DIT++KR EE+L A D++T L N Sbjct: 246 VALRHRDGRTIWAQLSCAALNGWQSDTAFILQLQDITDRKRYEEELVRLAMVDSLTDLAN 305 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 RR+F E + + +L+ ID D FKHIND GH GDEVL +A L S R Sbjct: 306 RRRFQQELEEAVTEAERTGRSGALVFIDLDMFKHINDTLGHPAGDEVLRQVATILRSAIR 365 Query: 324 KGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP---RFTVSIGVAHH- 379 GD R GG+EF L+L A +A+ + ++ + G T S+GV Sbjct: 366 PGDTAARLGGDEFALVLRNADGARAAQVADRLLTAIRRARFGGAEAPVSLTASMGVVLFP 425 Query: 380 EGNESIDELFKRVDDALYRAKNDGRN 405 E S+ EL R D AL AK GR+ Sbjct: 426 EHGRSVRELMNRADMALLEAKEGGRD 451 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 7/155 (4%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALN 162 G+ + ++ +A+ QR AR + P + D +IV N A Sbjct: 19 TRGVTSMGNQPSRSDGAADVQRALARSEARLAGMLEITPAATVAVDADQRIVLFNDMAEQ 78 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEIS------HLPGGHKPLNFVHKLADGSTRH 216 +GY E + + + H + + G Sbjct: 79 VFGYTREEVLGRPLDVLLPPETAARHRQHVTRFGLGPVRQRRMAERQELTARRKSGELFP 138 Query: 217 VQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 Q + + + L L +V D+TE+K E +L+ Sbjct: 139 AQIAIARVAMDDETLFLAVVQDLTERKETERRLKE 173 >UniRef50_B2T333 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T333_BURPP Length = 444 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 140/349 (40%), Gaps = 19/349 (5%) Query: 77 VQRKEEETALSCRLVLRKLTETEP-------VIIFEGIEAPATLGLKASRSANYQRK--K 127 V E E C +T II G T+ SR +R+ + Sbjct: 74 VASFEGERGAVCENHRVFVTPARDGAVVLACSIIKVGANLLMTVLTDISRQVAAERRARQ 133 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + T+ +G+I N + G++ + V+ Sbjct: 134 TESWLAGIYTSVNDFAFFSLDAEGRIESWNPSVERLTGFDETDVVGHTLSRFYARDEIVL 193 Query: 188 PIMHE---ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 E ++ G H F G Q + GD + ++ D+TE+ Sbjct: 194 HRSPEHIALTRDEGWHVE-EFWCDTKTGRRYWGQVLIAVLREEGDDISGYSVVLRDVTER 252 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K + L D +TG+ +R F+ I E + + S++++D D FK IND Sbjct: 253 KVSSDNLARLLTTDHLTGVSSRAHFFEIAEAEVARAERHGRALSVVMLDADYFKRINDTA 312 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GDEVL +A + R D V R GGEEF+L+LP T A+++AE +RV+V + Sbjct: 313 GHQAGDEVLKRIAGEAKGLLRTSDTVARLGGEEFILMLPSTTTSEAVAVAERLRVAVERA 372 Query: 363 SIS---GLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 I G + TVS+GVA N ++ L D ALY AK GRN V Sbjct: 373 RIDTAVGTLKATVSLGVATVSTANPTLQSLLAAADRALYDAKRAGRNCV 421 >UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1R3_DESRD Length = 457 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 12/346 (3%) Query: 71 IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 ++ + T R+++ + + LV R + T P + +G+ A ++ R+ Sbjct: 104 VVHVATPMRRKDGSEIWLDLVGRAIDRTTPPDLSKGVLWMAYDLTDIRQAYQQLREANAE 163 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM 190 FF ++++ R + N + G Q + + Sbjct: 164 LEGFFANCMIGIIILRGGRRIR--RVNQRLADILGDKPPEWYQGKCVSEFHVSQEKFEEF 221 Query: 191 HEI---SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI----YGDKLMLCIVHDITEQK 243 + S + H + F + DGS V ++ DK ++ +V DI+ +K Sbjct: 222 GRLFYNSLVLRDHSQVEFELRRVDGSPVWVSVSGKALDDATPPDLDKGVIWMVDDISTRK 281 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 EEQL A D++T + R+ F + QHL ++ ++ ++D D FK IND YG Sbjct: 282 EAEEQLARIATTDSLTNVSTRQHFMELANRALAQHLRNSRPLTVCMLDIDHFKQINDTYG 341 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV---A 360 H GD L A T+ R D++ R+GGEEF ++LP T D A +A IR +V + Sbjct: 342 HGTGDRALAWFAETVSGELRATDIIGRFGGEEFCIVLPETDQDEAQQVAHRIRTAVTGGS 401 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNR 406 + S +P TVSIG+A + S++ + + D ALY AK GRNR Sbjct: 402 SAAASPIPPITVSIGIALADTPASMEAVIQLADRALYAAKAKGRNR 447 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 9/149 (6%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE- 169 + L + +R + F + + L+D +R +I+ N L+ GY Sbjct: 14 SELEAENARLRAELAIARDELETIFDHSMMGVALVDHNR--KILTTNQRFLDILGYTSLH 71 Query: 170 TMCQKHTWEINMLGRRVM--PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI- 226 + + T ++++ + ++ + G + + DGS + I+ Sbjct: 72 EILGQQTHKLHVSHKDFEGFGEHYDTTLRHSGVVHVATPMRRKDGSEIWLDLVGRAIDRT 131 Query: 227 ---YGDKLMLCIVHDITEQKRLEEQLEHA 252 K +L + +D+T+ ++ +QL A Sbjct: 132 TPPDLSKGVLWMAYDLTDIRQAYQQLREA 160 >UniRef50_A5EDY2 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Bradyrhizobium RepID=A5EDY2_BRASB Length = 636 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 132/309 (42%), Gaps = 15/309 (4%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 L+ R A+ K+ + L + ++ D I + + + G++ + K Sbjct: 313 LQRQRLASALAAKEENFR--LLAEGSSDIVTRIELDECIGYVSPSTMRVLGWHPSQLLGK 370 Query: 175 HTWE-INMLGR-RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL- 231 +N L R ++ ++ +I + + D S V+ L Sbjct: 371 RAISGVNPLDRPQLQEMLDQIKKGIVDEARATYRMRRRDKSEIWVEATIRATRRPDGTLD 430 Query: 232 -MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 + + D+T+QK L+ +LE A D +TGL NRR+F + +LL+I Sbjct: 431 GFVAVTRDVTQQKALQGRLETLAIEDGLTGLANRRRFDERLLEEWGRAYRDKTSLALLMI 490 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTAL 349 D D FK ND YGH GDE L +A L A R DL R+GGEEF +LLP T Sbjct: 491 DIDHFKAFNDSYGHPAGDECLHTVAGILADEAQRSSDLAARYGGEEFAILLPNTDAAGCA 550 Query: 350 SLAETIRVSVAKVSIS----GLPRFTVSIGVAHHEGN----ESIDELFKRVDDALYRAKN 401 L E IR ++ + I+ G T SIG A L + D ALY AK+ Sbjct: 551 RLGERIRRALHEARITHDHNGPGIVTASIGGAVCRPGFERSAGPASLIEAADRALYAAKD 610 Query: 402 DGRNRVLAA 410 GR+RV+ A Sbjct: 611 GGRDRVVMA 619 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 9/312 (2%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 ++ + + + + + +++Q AP+ ++ G I N A + Sbjct: 219 LVADSVGQRDRVAIFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFV 278 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQT 219 GY+ + + ++ + G V + ++ H G ++ DGS Sbjct: 279 LVSGYSEDEVLGRNPRLLKS-GETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYA 337 Query: 220 YAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 PI + + +IT++K E+QL H A HD +TGL NR Sbjct: 338 TISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEV 397 Query: 278 HLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFV 337 + L+ +D DRFK +ND GH GDE+L ++ L R+ D V R GG+EFV Sbjct: 398 AKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFV 457 Query: 338 LLLPR-TPLDTALSLAETIRVSV-AKVSISGL-PRFTVSIGVAHH-EGNESIDELFKRVD 393 ++L +AE I ++ V +SG SIG+A + + ++ + L K D Sbjct: 458 VVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDAD 517 Query: 394 DALYRAKNDGRN 405 A+YRAK GRN Sbjct: 518 TAMYRAKQKGRN 529 Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 1/115 (0%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 L S + + RDG ++ N G E + + ++ ++ Sbjct: 13 ILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQRLEVVRQLK 72 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 G + DGS+ + G+ + L ++D++++K+ E+ + Sbjct: 73 E-AGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAEQAI 126 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 44/117 (37%), Gaps = 2/117 (1%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + +S+ ++ + +G I+ N AA + N + + K W+ ++ V P+ I Sbjct: 136 MLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWD-HLPDSVVAPMRRGIDR 194 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHA 252 + + + H + V + + + D+T+ + +QL Sbjct: 195 VLDRRETVESHHAIG-AKLFDVHMHLVADSVGQRDRVAIFSRDVTQSHQRRQQLRKL 250 >UniRef50_A1WTU4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTU4_HALHL Length = 454 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 104/411 (25%), Positives = 174/411 (42%), Gaps = 23/411 (5%) Query: 11 LLTSPVWIVSPFEEQ--LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN- 67 +L + V ++ + Q +++A+ A+ L+ + G + L L + Sbjct: 49 VLATEVAAIAVLDGQGGIVFASPQARKLLGLDQTATPEDGHAPAPPAEILAFRLVAITGT 108 Query: 68 --QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 EI EE LS + ++ A + +Y Sbjct: 109 PLSDARCEIAV--GGEERHVLSINAAPLPGDGGDTALV-------ALAMTDLTEQYDYYE 159 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVD---ANLAALNFYGYNHETMCQKHTWEINML 182 + + + L D I D + + YG + + +L Sbjct: 160 RALRESEQRLKLATEAAGLGVWEYD-AITDTYHWDERMMAIYGLEESQRPVTYRDWVALL 218 Query: 183 GRRVMPIMHEISHLP---GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 + ++ G + + F + DG TR ++ I+ ++ ++ I Sbjct: 219 DPEHHDRLEALTRREPTYGERREVEFRIQRPDGRTRDIRAVWQRIDDEHGRIQRLVGINE 278 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITEQ+ L +LE+ A HD +T L NR + + Q ++ +++LL D D FK Sbjct: 279 DITEQRELHSELEYRAAHDPLTDLFNRAKIQQLLRAAQAAYIRHHTPFAVLLFDVDHFKQ 338 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND +GH+ GD VL +AR +ES R+ D + RWGGEEF++L +T A LAE IR Sbjct: 339 VNDRFGHATGDAVLWLMARRIESVLRETDHMGRWGGEEFLILASQTDEAGAEVLAERIRH 398 Query: 358 SVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 V + G+ T+S+GVA E S++ L +R D ALY AK+ GRNR + Sbjct: 399 QVETTAFEGVGTVTISLGVAAAEPGTSLESLEQRADRALYAAKHRGRNRTV 449 >UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVU6_DICD5 Length = 483 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 130/282 (46%), Gaps = 16/282 (5%) Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI-------SHLP 197 D + + V + + G + M + L R++P E Sbjct: 194 TDRGNEYRFVYCSPVSTRVLGLTPQAMTAVPFGPGHPLRERILPEDRERIAHYYANGDFH 253 Query: 198 GGHKPLNFVHKLADGSTRHVQTYA-GPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHD 256 +F +G R + A G+ + + DIT+ K+ E L+ A D Sbjct: 254 RHSWRSDFRICSENGDVRWIHAEAMASYPEDGNTVFYGSMLDITDLKQSETLLQVLAQTD 313 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 ++TG+ NRR F + QH +I SLL+ID DRFK ND YGHSKGD + ++ Sbjct: 314 SLTGIANRRHFDERYQQLWRQHESIQMPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVE 373 Query: 317 TLESCARKGD-LVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG----LPRFT 371 TL + L+ R+GGEEF ++LP+T AL+LAE R +V + I T Sbjct: 374 TLAGQLPSSECLLGRYGGEEFTVVLPQTDYQQALALAERCRQAVESMEIPHTKSPQGVVT 433 Query: 372 VSIGVAHHEGNE---SIDELFKRVDDALYRAKNDGRNRVLAA 410 VSIGVA + S+ +L DDALYRAK+ GRNRV A Sbjct: 434 VSIGVAVARPGDAGSSMTQLSNDADDALYRAKHLGRNRVEAG 475 Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 5/122 (4%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + S +I I N A +G+ + + + + + + + Sbjct: 36 LLMNASTQAAIIATDSANHITLFNSGAERLFGFRACEVIGRDATTVVLRQGEMGQLSPQ- 94 Query: 194 SHLPGGHKPLN-FVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLE 250 L ++P + + ++ DG + + + ++L+ L ++ DIT ++RL EQL Sbjct: 95 -ALLRHYQPFSVWCYRKKDGGIFWGELSFHEVRLPDERLLGYLSVITDITARERLLEQLH 153 Query: 251 HA 252 Sbjct: 154 QQ 155 >UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXY5_9BACT Length = 829 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 125/303 (41%), Gaps = 11/303 (3%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + A+++R K+ + ++ I N GY E Sbjct: 267 LTAEIADHKRAKEQLLKLSQAVEQSFTAIVITDVACAIEHVNPKFTEVTGYAREEALGNK 326 Query: 176 TWEI---NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 +++ NM R I+ + L G V+ DG Q + ++ Sbjct: 327 LFDLLLFNMSDERHENIITMV--LSGEIWRKELVNSRKDGEQFFAQVTISAVRGDDGYII 384 Query: 233 --LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 + ++ DITE+K+ EE L A HD +T L NRR+F E +LL + Sbjct: 385 NFIGVIEDITERKKFEEMLVVMAEHDPLTNLFNRRRFQVELEYWLGYSKRYNTGGALLFL 444 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK+IND GH GDE+L A L+ R D++ R GG+EF ++LP T +D A S Sbjct: 445 DIDNFKYINDTLGHKVGDEILVEFAILLKERVRPNDIIARLGGDEFAVILPNTNVDHARS 504 Query: 351 LAETIRVSVAKVS---ISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 AE I S K T S+G+A + D L D A+Y AK G+N+ Sbjct: 505 FAEQITQSAQKHFRVLNERGHNITTSLGIALFPDHSLEADALLACADMAMYGAKEAGKNQ 564 Query: 407 VLA 409 Sbjct: 565 CCI 567 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 34/396 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 ++ + ++++ N AA++L + G + + N + EI + Sbjct: 692 LILDLQGKVLFVNPAAEILFGRKQEDLM--GQILG---------IPIIVNNY--SEIEIL 738 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q + + RLV + + Q+ ++ + T Sbjct: 739 QPSGKLIIVRMRLVKII------------WQEKNAFLASLVDVTDIQQAQEQLKILYQAT 786 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL- 196 +P+ ++ +G I N GY + ++ I G +I Sbjct: 787 EQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQNPR-ILKSGETTTEEYKQIWKTI 845 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G F +K +G PI+ + + DITE+K + L + A Sbjct: 846 TSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQA 905 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+TGL NR + +Q + +++ ID D FK +ND GH GD +L Sbjct: 906 NYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQK 965 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISGLPRF 370 +++ L+ C RK D V R GG+EF+++LP +A I S+ K ++ Sbjct: 966 VSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFI 1025 Query: 371 TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + SIG+ + + + L + D A+Y K GRN Sbjct: 1026 SASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRN 1061 Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 70/208 (33%), Gaps = 16/208 (7%) Query: 64 DLQNQHDIIEILTV-QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 D Q + I I T Q E A L K + ++ E A + + + Sbjct: 361 DQQGETLIQTIRTRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIM--ISVMDVS 418 Query: 123 YQRKKQGFYARFF-----LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 Q+ + + LT +AP+ + G+ + AN AL G + + Sbjct: 419 QQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWA 478 Query: 178 EINMLGRRVMPIMHEISHL-PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LC 234 R I + + ++ +DG+ V A P K++ L Sbjct: 479 NYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLG 538 Query: 235 IVHDITEQKRLEEQ-----LEHAAHHDA 257 + DITE+K EE + A DA Sbjct: 539 TLTDITERKNAEEATNKINAQMQAIFDA 566 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 65/190 (34%), Gaps = 9/190 (4%) Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 Q + E +R E R L L +++ + + +E + + + Sbjct: 247 QLEQQRFEAKFTRRAEGTAVTLTR--LFDLPDSQTNV--QQLEKRLKPEVTPKDNPHNPP 302 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN-HETMCQKHTWEINMLGR 184 + + F S+ + G + N A L + Y+ + + K + + Sbjct: 303 SENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQ 362 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV--HDITEQ 242 + ++ I G + K D S Q A ++ + + ++ D+++Q Sbjct: 363 QGETLIQTIR--TRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVSQQ 420 Query: 243 KRLEEQLEHA 252 + EE L+ Sbjct: 421 QGTEESLQKL 430 Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 21/142 (14%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 ++ R+ + TN +L++D G+++ N AA +G E + + Sbjct: 664 SDRKQTELALRESEERLKTIISTNPNGLLILD--LQGKVLFVNPAAEILFGRKQEDLMGQ 721 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 +LG ++ + G V+ I L Sbjct: 722 ------ILGIPII-----------VNNYSEIEILQPSGKLIIVRMRLVKIIWQEKNAFLA 764 Query: 235 IVHDITEQKRLEEQLE--HAAH 254 + D+T+ ++ +EQL+ + A Sbjct: 765 SLVDVTDIQQAQEQLKILYQAT 786 Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 75/245 (30%), Gaps = 36/245 (14%) Query: 23 EEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE----LPKYLSDLQNQHDI-IEILTV 77 + +YAN A L+ + G + + +++ +Q Q E Sbjct: 451 SGKWLYANEKALLISGISLDKAIGMGWANYVHNDDRARVFNEWIKSIQTQTSWRTEYRYR 510 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK-QGFYARFFL 136 T + + + ++ E ++ + G T A + N + Q + F Sbjct: 511 HSDGNNTWVLVQAIP-EMDEQGKIVGYLGTLTDITERKNAEEATNKINAQMQAIFDAF-- 567 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 P +L + G I+D Y + + +GR V ++ E Sbjct: 568 ----PDILFRIDQQGTILD----------YKTQDHHSLYCSPQEFIGRTVQEVLPES--- 610 Query: 197 PGGHKPLNFVHKLADGSTRHVQ----------TYAGPIEIYGDKLMLCIVHDITEQKRLE 246 G L G ++ + I + +V DI+++K+ E Sbjct: 611 VGNLLYEGVQKALVSGEIVSIEYFLIIALQKRFFDARIVRLSPVETIAVVRDISDRKQTE 670 Query: 247 EQLEH 251 L Sbjct: 671 LALRE 675 >UniRef50_Q2JJQ3 Sensory box protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JJQ3_SYNJB Length = 671 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 134/301 (44%), Gaps = 16/301 (5%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + + R+ + Y FF + D + G+ + AN GY+ + Sbjct: 355 SERRQVEEELRQAEERYRNFFENAVEGIFFTDAA--GRYLSANPMLAQICGYSSPEELMR 412 Query: 175 HTWEINMLGRRVMPIMHE----ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 E V P E + G + + + DGS V+ A ++ Sbjct: 413 EAKEAGKRQLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGN 472 Query: 231 LML--CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 L+ I DIT QK+ +E AHHDA+TGL+NR F + Q+ ++ +L Sbjct: 473 LLGYEGICEDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQY--YSECLALF 530 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT- 347 +D D FK IND +GHS GD +L +A L C R GD+V RWGG+EF LLLPR T Sbjct: 531 FVDLDHFKDINDTFGHSVGDALLQGVAERLTKCVRPGDIVARWGGDEFTLLLPRIGSSTV 590 Query: 348 ALSLAETIRVSVAKVSISGLPR---FTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDG 403 A LA+ I V V + S T SIGVA + + + L D ALY+ K +G Sbjct: 591 AARLAQRI-VDVFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADLALYQVKENG 649 Query: 404 R 404 R Sbjct: 650 R 650 >UniRef50_C3JZH6 Putative regulatory protein n=2 Tax=Pseudomonas RepID=C3JZH6_PSEFS Length = 801 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 22/356 (6%) Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 N H+ E T+ R++ L L + I I T +A + + Sbjct: 452 DNLHEARE-WTLIRQDGSPLTVNMLATVLLDDHGLWIGHLAIYLDITEQKRAYEALAARD 510 Query: 126 KKQGFYARFFLTNSAPMLL----IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + L+ P + ++P + + + A+ + Y E + Sbjct: 511 RLLKK-----LSAHVPGGIFQFTLEPQDNWKFIYASDGMRDIY----EIEPGVLQQDAKK 561 Query: 182 LGRRVMPIMHE-------ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI-YGDKLML 233 + R+ P+ E +S L H + +L R ++ A P E+ G L Sbjct: 562 VFERIHPLDAERVRASIRLSALQLSHWREEYRVQLPQRGLRWIRGEATPEELPAGGTLWH 621 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 V DI++ KR+EE+L + D++TG+ NRR F + ++ + S++++D D Sbjct: 622 GYVSDISDLKRVEEELRALSITDSLTGIHNRRYFQDRLKAEMVRLNRTSGALSVIMLDID 681 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK IND +GH+ GD VL L + + R+ D+ R GGEEF++L P T D A SLA Sbjct: 682 HFKRINDQHGHAVGDGVLQELCKRISQRLRRTDVFCRLGGEEFMVLCPHTDGDQAYSLAT 741 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + S+ + + T S GVA +E ID L R D A+Y AK GR+RV A Sbjct: 742 ELWASLRSAPMEPVGIVTASFGVASWRVDEGIDGLLLRADSAVYVAKQGGRDRVEA 797 Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 108 EAPATLGLKASRSANYQRKKQGFY-----ARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 + L L R+ + ++Q R L + + +I G I N A Sbjct: 342 QRQRALKLVEQRTVQLRLREQELRGAHGQLRSVLNAATQVAIIATDLRGIINTFNAGAEQ 401 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG----------------HKPLNFV 206 G+ E + +T E L + +S G H+ + Sbjct: 402 MLGFQAEHVVGTYTLESLHLATELEVRAASLSVALGKRIPASQAMLVESPDNLHEAREWT 461 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAM 258 DGS V A + + L I DITEQKR E L A D + Sbjct: 462 LIRQDGSPLTVNMLATVLLDDHGLWIGHLAIYLDITEQKRAYEAL---AARDRL 512 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 142/342 (41%), Gaps = 21/342 (6%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 T QR + + + + L +T VI+ + + +R A Sbjct: 801 WTHQRADG-SPVPVEVTLTPITLRGEVILHTLWRDISERRVTETRL--------RLLAAA 851 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 F ++ +++ D RD +I++ N A GY + + ++ GR + Sbjct: 852 FEHSAEAIMVSD--RDNRILEVNDAFCRLTGYAADEVRGSDPRLLSS-GRTSAEEYRTMW 908 Query: 195 HL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 GH + DGS I + + DI+E+K EE++ Sbjct: 909 QAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKIS 968 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLA--IAQDYSLLLIDTDRFKHINDLYGHSKGD 308 H AH D +T L NR + + +++ +D DRFK+IND GH GD Sbjct: 969 HLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGD 1028 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK-VSISGL 367 +L +A L S R D+V R GG+EFV++L A +A I ++++ I G Sbjct: 1029 ALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGH 1088 Query: 368 -PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 T SIG+A ES++ L + D A+Y AK+ GRN V Sbjct: 1089 ALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNV 1130 Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 18/252 (7%) Query: 14 SPVWIVSP-FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 SPV IV ++ Y N + + + P + S + L Sbjct: 604 SPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSLWQTLLEG 663 Query: 73 EILT----VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 ++ T +RK E + + + V + ++ T L+A + ++ + Sbjct: 664 KVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLL---QESE 720 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVM 187 + R F P+LL+ +DG +D N A L GY + + + +I+ + Sbjct: 721 EAFRRLFEDAKDPLLLL---KDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQPDG 777 Query: 188 PIMHEISHLPG------GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 E + G+ + H+ ADGS V+ PI + G+ ++ + DI+E Sbjct: 778 QASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRDISE 837 Query: 242 QKRLEEQLEHAA 253 ++ E +L A Sbjct: 838 RRVTETRLRLLA 849 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 16/143 (11%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 +P+ ++ +R+ +I N + GY+ ++ I G + Sbjct: 598 LQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPR-ILQSGEAPSDTYRSL 656 Query: 194 SH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL 249 L G F ++ +G + PI ++ L + D+TE+ R ++ L Sbjct: 657 WQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLL 716 Query: 250 E--HAAHHDAMTGLLNRRQFYHI 270 + A RR F Sbjct: 717 QESEEAF---------RRLFEDA 730 Score = 51.0 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 81/250 (32%), Gaps = 14/250 (5%) Query: 10 DLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD--LQN 67 D + P+ P +++ NS + L F+ G Y + S + + Y + Sbjct: 230 DAVNKPLNPEHPARQRM---NSGERTAT--LQFAAQSDGVYRIYSFQRIEHYPFYFIIGI 284 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL-KASRSANYQRK 126 HD R C L+ + E EA L + R + Sbjct: 285 SHDDALAGWRTRALVVGFSGCLLLALLAGLLLQIWRSEQREAKVVADLVERDRQLRANSE 344 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + R L +A + DG ++ AN A C ++++ Sbjct: 345 RLEIFQR--LAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAACSDYSFKQFYSREEA 402 Query: 187 MPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQ 242 + H + LP G + G T + D+ ++ ++ DI+E+ Sbjct: 403 NRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIATVLADISER 462 Query: 243 KRLEEQLEHA 252 K +EE+ Sbjct: 463 KEMEERNRQL 472 Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 66/231 (28%), Gaps = 26/231 (11%) Query: 23 EEQLIYANSAAKLLM--------QDLTFSQLRTGPYSVSSQKELPK-YLSDLQNQHDIIE 73 + L+YAN A + ++ D +F Q YS L L L Sbjct: 366 DGSLLYANPALRRMIDMPQGAACSDYSFKQF----YSREEANRLQHAVLPMLLPAGQWTG 421 Query: 74 ILTVQRKEEET--ALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 + ++ T A+ V+ + PVI AT+ S + + + Sbjct: 422 EIELRSLSGRTTPAIHTLFVVHNTADEPPVI--------ATVLADISERKEMEERNRQLL 473 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 A ++ I R +V N +GY + K + I Sbjct: 474 AEMETLLGNALVGIVHLRQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIEVFEKIGA 533 Query: 192 EISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDK-LMLCIVHDI 239 + ++ + DGS I+ + + DI Sbjct: 534 RAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFADI 584 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 93/302 (30%), Positives = 139/302 (46%), Gaps = 21/302 (6%) Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH-ETMCQKHTWEIN 180 + Q + ++ L+ +++ + V +N + N E + Q + + Sbjct: 31 ELREASQALETLYAALDNVDSGLLILNKELRAVYSNPILHVMFRANSCEEIRQTRPFYAD 90 Query: 181 MLGRRVMPIMHEI---------SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 ML + ++ G KP++ + DG P D Sbjct: 91 MLAAAAQAVAVDLDDYVARRLAWVQSGDPKPMDL--AMIDGKALRCHLAVLP-----DGG 143 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + I D+T+ R E+LE A D MTG+ NRR F + + + + S L+ID Sbjct: 144 RMLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMID 203 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK IND +GH GD+++ LA+ C R D++ R GGEEF LLLP T L AL++ Sbjct: 204 IDHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAV 263 Query: 352 AETIRVSVAKVSI---SGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRV 407 AE +R VA S+ SG R TVSIG A + I +L + D ALY AK+ GRNRV Sbjct: 264 AERLRGEVAASSLLMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRV 323 Query: 408 LA 409 + Sbjct: 324 VC 325 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 15/312 (4%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 + A + K ++ K+ F +AP+ ++ + DG+I+ N G Sbjct: 259 TKQLEAKIQEKIKIETELKQSKESFQKAII---NAPLPIMIHAEDGEILQINDIFTELTG 315 Query: 166 YNHETMCQKHTWEINMLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAG 222 Y H+ + TW G+R + P+++ + L FV +D + + + Sbjct: 316 YTHDEIPTIDTWLEKAYGKRQNIIRPVINHLYDLETKIDEGEFVIDTSDEKQKILNFNSA 375 Query: 223 PIEI--YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 P+E G ++++ + D+TE+K+ EE+L H A HD +T L NR F + Sbjct: 376 PLEQLSDGRRVVISMAIDVTERKKAEEKLRHNALHDTLTKLPNRLLFIDRLNQSIERIKR 435 Query: 281 IAQ-DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 +++L ID DRFK IND GH GD VL +A L SC R D V R GG+EF++L Sbjct: 436 HPTYSFAVLFIDLDRFKLINDSLGHIIGDRVLIQIATKLTSCVRSLDTVARIGGDEFIIL 495 Query: 340 LPRTPLD-TALSLAETIRVSVAKVSISGLPR---FTVSIGVAH-HEGNESIDELFKRVDD 394 L A+ +AE I ++ K+ I R + SIG+A + NE D++ + D Sbjct: 496 LNDLESKIKAIHIAERILETL-KLPIIIEQRNIVISASIGIAFNSQNNEEADDIIRNADL 554 Query: 395 ALYRAKNDGRNR 406 A+Y+AK G+ R Sbjct: 555 AMYKAKEQGKAR 566 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 50/155 (32%), Gaps = 7/155 (4%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 ++ + + + + ++ + Q Y T + L+ D + N A Sbjct: 96 LLKKSLFKLRQIANQLNKLEQSWYQNQLRYQAITETQTE--LICRFDSDRILTFINDAYC 153 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS--TRHVQT 219 +++ E + E + + + + + + +++ + R Q Sbjct: 154 HYFNRTKEELENSSFLET-IFNEDQEKVCQVLDSINPHNLIVTHEYRVMNHQEDIRWHQW 212 Query: 220 YAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHA 252 I +L + + DIT K E +L+ Sbjct: 213 INRGIFDENGQLTEIQAVGRDITLLKEAEAKLQQL 247 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 8/305 (2%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + + + Q +Q + L N + + + + N +G E Sbjct: 146 ISTDITVEKQLQEQVNEQSYLLETMLNNIDAHIYVK-DCERTFLYVNNRVAELFGDKAEN 204 Query: 171 MCQKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + K +I + ++ H + ++ T Sbjct: 205 IIGKKDTDILPKEIAEHFYQSDKQVFETNQKQVIEETTHGENGDNCHYISTKVPFDRPDK 264 Query: 229 DKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 ++ D+TE +L+E+ + A+ D +T L NRR F E + + +L+ Sbjct: 265 LPALIGFSTDVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTLI 324 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ID D FK IND +GH GD+VL +A+ L++ R+ D++ R GGEEF +LLP T +A Sbjct: 325 SIDIDHFKSINDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMSA 384 Query: 349 LSLAETIRVSVAKVSIS----GLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDG 403 ++ AE I+ +++ I+ G +VSIGV+ +++ D LF R D ALY+AKN G Sbjct: 385 MTFAERIKEEQSRLIITGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAKNTG 444 Query: 404 RNRVL 408 RN V Sbjct: 445 RNTVC 449 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 10/274 (3%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHK 201 ++ + I+ N A +GY + + + GR + GG Sbjct: 460 IMVTDANQLILRVNRAFTELFGYTAQDVLGATPRVLQS-GRHDPAFYAAMWDGITRGGAW 518 Query: 202 PLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMT 259 + +G V + + G + DIT +K E+ + A +D +T Sbjct: 519 QGEIWDRRKNGECFPVWLSITVVCGDDGGVSHYVATHTDITLRKAAEDDIRQLAFYDPLT 578 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 GL NRR Q +LL +D D+FK +ND +GH GDE+L A+A+ L+ Sbjct: 579 GLPNRRLLQDRLHQAMSQARRERGRLALLFLDLDKFKPVNDDFGHQAGDELLQAVAQRLQ 638 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAETIRVSVAKVSISGLPR-FTVSI--G 375 +C R+ D V R GG+EFVLLLP A+++AE I + + R T+S G Sbjct: 639 ACVRESDTVARLGGDEFVLLLPSIEAAQDAMAVAEKIHQAFGRPFTLSAGRNATMSFSTG 698 Query: 376 VAHHEGNESID-ELFKRVDDALYRAKNDGRNRVL 408 +A + + S + L + D+A+Y+AK GR+R + Sbjct: 699 IAVYPEHASDEKALMRHADEAMYQAKAAGRDRFV 732 >UniRef50_C5V180 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V180_9PROT Length = 578 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 96/344 (27%), Positives = 145/344 (42%), Gaps = 34/344 (9%) Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLI 145 +S +V L E + + I A T + A F T+ A ++ Sbjct: 231 VSTTIVPF-LDERGKPVQYCAIRADIT-------ARKLIEDNLRIAAATFETHDA---IV 279 Query: 146 DPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPL 203 + I+ N A GY E + K+ ++ GR + L G Sbjct: 280 ITDANANIIKVNKAFTTISGYQPEEVLGKNPRMMSS-GRHDKAFFESLFDKVLHDGSWVG 338 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 K DG + K+ + I DITE+K+ EE + A++D +T L Sbjct: 339 EIWDKRKDGEIYPRWMTITAVRDAEQKISQFVGIFSDITERKKNEELINKMAYYDPLTQL 398 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NRR + A +++ +D DRFK +ND +GH GD +L + R + SC Sbjct: 399 PNRRMLTDRLGRAMAANYRHAIYGAVMFVDLDRFKPLNDTHGHVAGDLLLVEVGRRIGSC 458 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAETIRVSVAKVSISG--------- 366 R+ D V R+GG+EFV++L D A+S+AE IRV +A+ Sbjct: 459 IREMDTVARFGGDEFVVMLSELNSDRTLSRAEAISVAEKIRVCLAETYFLKFKQGESLPV 518 Query: 367 --LPRFTVSIGVAHHEGNESI-DELFKRVDDALYRAKNDGRNRV 407 + SIGV G ES +E+FKR D+A+Y+AK GRN V Sbjct: 519 CVEHHCSSSIGVVLFNGQESSQEEIFKRADEAMYQAKEGGRNSV 562 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 85/250 (34%), Gaps = 18/250 (7%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS--VSSQKELPKYLSDLQNQHDIIEIL 75 +++P E L + + + L +R G + V + L + Q+ E Sbjct: 36 VIAPAETGLQFITFFPAVALSALFLG-VRAGLFVTVVCTVFSLYFFFPPYQSFQFNFE-- 92 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 + + C + + + LK S + + + + +F Sbjct: 93 --HHEALAALVFCADGMVVSISIGVMHRYYSGYIKLVDELKISLEKSVRSEIELAQHKFA 150 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L SA + D G I N + Y+ E + K+ IN G + Sbjct: 151 LDQSAIVAFTDIR--GTITYVNDLFCSISQYSREELIGKNHRIINS-GTHPKDFFKTLYC 207 Query: 196 --LPGGHKPLNFVHKLADGSTRHVQTYAGP-IEIYGDKLMLCIVH-DITEQKRLEEQLEH 251 G + ++ DGS V T P ++ G + C + DIT +K +E+ L Sbjct: 208 AITHGRVWSGDICNRAKDGSLYWVSTTIVPFLDERGKPVQYCAIRADITARKLIEDNLRI 267 Query: 252 AA----HHDA 257 AA HDA Sbjct: 268 AAATFETHDA 277 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 162/398 (40%), Gaps = 14/398 (3%) Query: 24 EQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEE 83 ++ N AA+ + L + ++ L N E + E Sbjct: 148 GRISAFNKAAENIFGYTASEVLGNNVKMLMPSPYREEHDDYLGNYAATGERKIIGTGREV 207 Query: 84 TALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN---SA 140 + L + + V + +GL S+ +K+ +R FL + + Sbjct: 208 SGLRKSGEIFPM--QLGVTDVATPDDRFFVGLIRDLSSEKMLRKRLAESRNFLADVIEHS 265 Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH 200 P SR+G+ + N G + + K EI ++ + GH Sbjct: 266 PSATYVKSREGRYLLVNRKHEEVTGLSRAQVLGKTDAEIFPAAAAEAYRRVDLEVMASGH 325 Query: 201 KPLNFVHKLADGSTRHVQTYAG-PIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDA 257 + KL G P +++ + I DIT K +++LE + D Sbjct: 326 -TVEAEEKLHKGQGEAFFLSVKFPTRNSSNEITGICGISTDITPIKHYQKELERLSQFDE 384 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +T L NRR F+ + + + S++++D D FK IND +GH GD VL + + Sbjct: 385 LTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKRINDGHGHKTGDLVLANIGKQ 444 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS-GLPR---FTVS 373 + R D+ R GGEEF +LLP T L+ A +AE +R VA+ + G R T+S Sbjct: 445 IGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRKQVAETWLDIGDGRTLNCTLS 504 Query: 374 IGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLAA 410 IG+A + ++ L + D ALY AKN GRN+V A Sbjct: 505 IGLATKSDQQIDLENLLHQADTALYAAKNSGRNKVSCA 542 Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 11/138 (7%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R QR +I R G+I N AA N +GY + + Sbjct: 122 RVVADQRSAAAMIDNMLEG------VIRIDRVGRISAFNKAAENIFGYTASEVLGNNVKM 175 Query: 179 INMLGRRVMPIMHEISHLPGGHKPL-----NFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 + R + ++ G + + G +Q + D+ + Sbjct: 176 LMPSPYREEHDDYLGNYAATGERKIIGTGREVSGLRKSGEIFPMQLGVTDVATPDDRFFV 235 Query: 234 CIVHDITEQKRLEEQLEH 251 ++ D++ +K L ++L Sbjct: 236 GLIRDLSSEKMLRKRLAE 253 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 19/343 (5%) Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 E V ++ + R + ++ +F G T ++ Sbjct: 205 EYRIVHPEKGVRWIHARTYRFE---SDHKKLFVGTAEDITERKVQEEHVLKSKQHVEALY 261 Query: 133 RFFLTNSAPMLLIDPSR---DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 R P+ + R D + N AA+ + + + E+ + Sbjct: 262 R-----GIPLPIFTWERRNDDFMLSSFNTAAVEMTQGKAKHLKGRWLSEVYRDQNPQVIE 316 Query: 190 MHEISHLPGGHKPLNFVHKLAD-GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQ 248 + + L G ++++ + D+ ++ +V+DIT Q++ +E Sbjct: 317 DIHRCFESRSNLRRQMSYTLVSTGEEKYIEASYVYVP---DRHVMAMVNDITHQQQYQEH 373 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 L+ + D +TGL NRR F + + + +L ++D D FK +ND YGH GD Sbjct: 374 LKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDIDHFKDVNDKYGHDVGD 433 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS--- 365 VL L R L R D+ R+GGEEF + P T L A + E +R A +S Sbjct: 434 HVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICERLRTLCAASEVSRNG 493 Query: 366 GLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 G FTVS G++ +E +D L K D+ALY AK +GRNR+ Sbjct: 494 GTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRI 536 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 3/125 (2%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 K+Q RF + N + + +++ + + + +G E M + M+ R Sbjct: 124 KEQEEVLRFLVENINEVFWLRDLNQDRVIYVSPSISSVFGITPEDMYSDSRAFMRMIDER 183 Query: 186 VMPIMHEISHLPGGHK---PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 + + + + + R + E KL + DITE+ Sbjct: 184 DLARVQRAFQAVRNERIDFNEEYRIVHPEKGVRWIHARTYRFESDHKKLFVGTAEDITER 243 Query: 243 KRLEE 247 K EE Sbjct: 244 KVQEE 248 Score = 42.1 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + + + + AN A + T+ KH EI + + ++ Sbjct: 15 FLEQIEDAIAIVNTEHIYIFANAAYCRLRRTDPATIIGKHVREIVGEDFYQLLVREKLEE 74 Query: 196 -LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML-CIVHDITEQKRLEEQLEHA 252 L G G T H+ P+ + ++ DI+ K EE L Sbjct: 75 VLQGAQVQYESPVTSDAGHTSHLAVSYFPLPDATAPAYVAAVLRDISAPKEQEEVLRFL 133 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 86/310 (27%), Positives = 129/310 (41%), Gaps = 16/310 (5%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L S + Q ++ Y ++ L A + + D G+I AN GY+ Sbjct: 678 RRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVK--GRITYANDKFSEISGYSI 735 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEI 226 E + + +N G E+ G ++ DGS V T P Sbjct: 736 EELLGQDHAILNS-GYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIG 794 Query: 227 YGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 K + I DIT++K E++ + A +D +T L NRR + + Sbjct: 795 DDGKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRG 854 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP 344 +LL +D D FK +ND GH GD +L +A L +C R+GD V R GG+EFV++L Sbjct: 855 GALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLS 914 Query: 345 ------LDTALSLAETIRVS-VAKVSISGLP-RFTVSIGVAHH-EGNESIDELFKRVDDA 395 A + E I + G T S+G+ + N DEL K+ D A Sbjct: 915 EQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIA 974 Query: 396 LYRAKNDGRN 405 +Y+AK GRN Sbjct: 975 MYQAKKLGRN 984 Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 4/140 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + +++ +K Y L + ++ + D ++ N A G + + + Sbjct: 420 VQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLSQQAL 479 Query: 172 CQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 IN++ + L + LADG+ R V + Sbjct: 480 IDDIEVWINLIHPDDCAQAKLAMKAVFEQSSVALEYRIVLADGTVRWVSDSRHVVYGESG 539 Query: 230 K--LMLCIVHDITEQKRLEE 247 + ++C++HD+T ++ + Sbjct: 540 ESAELVCVIHDVTAKRLAAD 559 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 124/298 (41%), Gaps = 21/298 (7%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 R+++ Y F ++ + L +G ++ N A + + L Sbjct: 66 RQQEERYRGIFENSTEGIFL--ADAEGALMAVNPALVGLL--RPGEVADDPATATPALAG 121 Query: 185 RVMPIMHEISHLP---------GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI 235 V + H+ + G + + G A +E G ++ + Sbjct: 122 DVQSLFHDPTDYQAFAQKLAARGQVRRMEARLATPRG-PVWCLVGAALVEPDG--HVVGM 178 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DI+ +K LEE+L A D +TGL NRR F+ S++++D D F Sbjct: 179 TQDISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLDIDHF 238 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND YGH GD VL A+A L R DL R GGEEF +L P T L + LAE + Sbjct: 239 KAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVELAERL 298 Query: 356 RVSVAKVSISGL---PRFTVSIGVAHHEGNES--IDELFKRVDDALYRAKNDGRNRVL 408 R+++ + ++ + T S GVA + R D ALY AK GRNRV Sbjct: 299 RLALEDMVVTADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNRVC 356 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 133/300 (44%), Gaps = 5/300 (1%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 A + R+ + +T + + I DG+ V+ N +G+ E Sbjct: 401 AIQDITELRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREE 460 Query: 171 MCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + K + E N+ E+ G + +G+ R V + I+I G+ Sbjct: 461 LIGKTSVETNLWPDPESRQRWLEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGE 520 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 K +L VHDIT++K + ++E+ AHHDA+TGL NR F +LL Sbjct: 521 KHVLTFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLF 580 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 +D D FK IND GH GD +L +A L C R+ D V R GG+EF++ L A+ Sbjct: 581 VDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAI 640 Query: 350 SLAE-TIRVSVAKVSISGLPRF--TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + A I ++ + T+SIG+A + E D L K D A+Y+AK GRN Sbjct: 641 NSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRN 700 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 17/372 (4%) Query: 42 FSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT-VQRKEEETALSCRLVLRKLTETEP 100 F ++ Y K ++ +L + + + +K+ Sbjct: 179 FRDIKNQLYV--EPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGA 236 Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 V +EG T +A QR ++ + F + + LID R+ IVD N A Sbjct: 237 VAYYEGTVVDITDRKRAEEQLAAQR---AYFDQLFANSPQAIALIDMRRN--IVDVNHAF 291 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMH--EISHLPGGHKPLNFVHKLADGSTRHVQ 218 + +G+ + + ++ + ++ + L G + DG V Sbjct: 292 EDLFGFKAAEIKG-YGMRAYIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVS 350 Query: 219 TYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 PIE G + ++ I DI+E+K EEQ+ H A HDA+TGL NR F + + Sbjct: 351 MIGFPIEFGGQPQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRALTR 410 Query: 278 HLAIAQ-DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 Y++L+ID ++FK IND GH GD++L ++R L +C R D V R GG+EF Sbjct: 411 ARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEF 470 Query: 337 VLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRFT--VSIGVAHH-EGNESIDELFKRV 392 ++L +++ + I ++ K + T S+G+ +S +++ + Sbjct: 471 AVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDA 530 Query: 393 DDALYRAKNDGR 404 D A+YRAK GR Sbjct: 531 DIAMYRAKESGR 542 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 10/149 (6%) Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 R+ + Y F + P G+ ++ N YG++ +H Sbjct: 122 RRRAEEQLDAAERKYRAIFENAVEGIFQTTPG--GRYLEVNRTLARIYGFDSVDEMTEHF 179 Query: 177 WEIN----MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 +I + +R + E+S + DGS + A + + Sbjct: 180 RDIKNQLYVEPKRRDDFVRELSA-HDQVRNFESAIHKKDGSVIWISENARVVRDADGAVA 238 Query: 233 L--CIVHDITEQKRLEEQLEHA-AHHDAM 258 V DIT++KR EEQL A+ D + Sbjct: 239 YYEGTVVDITDRKRAEEQLAAQRAYFDQL 267 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + Y R F ++ L+ G ++ N + +G + + + ++ Sbjct: 10 EDVYRRIFESSPNAALV--RDASGVVLAVNASFEALFGLDAAEVVGRDLRQVVRPADDGE 67 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLE 246 + L G DG T P ++ G + I DI+ ++R E Sbjct: 68 TAGGD-WSLGGAAFSRRTRWTAGDGVTVDACPCQFPAGQVDGKPVSCVIFRDISGRRRAE 126 Query: 247 EQL 249 EQL Sbjct: 127 EQL 129 >UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=B3PID2_CELJU Length = 844 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 18/314 (5%) Query: 108 EAPATLGLKASRSANYQ---RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + + L ++ + RK + + + P+++ + G + AN A N Sbjct: 254 QLLDVVELSLAKRRAVELALRKSEEHLRQII--DHLPVMIGARNIAGYYLFANKALANEL 311 Query: 165 GYNHETMCQKHTWEINMLG-RRVMPIMHEISHLPGGHKPLNFVHKL---ADGSTRHVQTY 220 GY E M H ++ + ++ + G++ L+ + + A G +QT+ Sbjct: 312 GYTPEQMRNLHVRQLLKNSVFDIDTMLQNDYRVIRGNEELDVIEERFITASGKQLFLQTH 371 Query: 221 AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 P+ Y +K+ L + DITE+K + ++E AHHDA+TGL NR Q E + Sbjct: 372 IMPLAFYDEKVALIVSVDITERKNAQAKMEFMAHHDALTGLPNRVQLVERLEHELRRAER 431 Query: 281 IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL 340 ++L ID D+FK+IND GH GD+VL +A L+ R+ DLV R G+EFV++L Sbjct: 432 HGYYGAVLFIDLDQFKNINDSLGHPVGDKVLEVVATRLQQSVREEDLVARLSGDEFVVVL 491 Query: 341 P------RTPLDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHEG-NESIDELFKR 391 T A ++E IR +++ + S R T S+GV + N S+ EL + Sbjct: 492 TVLDQNMETAALRAGEISEKIRSIISQPYVYDSMELRVTCSVGVVVYPDKNNSVHELLRY 551 Query: 392 VDDALYRAKNDGRN 405 D A+Y+ K GR+ Sbjct: 552 ADTAMYQVKEKGRD 565 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 84/328 (25%), Positives = 127/328 (38%), Gaps = 27/328 (8%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 L + + + + + F + M ++ P G + N A + GY Sbjct: 161 TLEQDRLSQQQQAAVSKMEENMALFEGAFRHAAIGMAIVSP--QGGWMRVNQALCSILGY 218 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP--LNFVHKLADGSTRHVQTYAGPI 224 + E + I + H L G + + +G V + Sbjct: 219 DEEALLASDFQTITHPDDLETDLHHVEEMLTGKRSSYWMKKRYIHKNGHIVWVLLAVSLV 278 Query: 225 EIYGD--KLMLCIVHDIT--------------EQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 + L + DIT E + L ++L A D +TGL NR Sbjct: 279 RNGDGSPRYFLSQIEDITAQVTAELTLREKQGELEELNQELASMARTDPLTGLYNRLVLM 338 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 + ++ S++ +D D FK ND YGH +GD L A+A L R D++ Sbjct: 339 EGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDSYGHVEGDAALQAVAEALRPVIRDTDVL 398 Query: 329 FRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNE----- 383 R+GGEEFV LLP A +AE R +VA++S P ++S+GVA + Sbjct: 399 ARYGGEEFVALLPTANSQDAERVAERCRRAVAEISSLSRP-VSLSVGVATLRFGDEADET 457 Query: 384 -SIDELFKRVDDALYRAKNDGRNRVLAA 410 S + L D ALY AK GRNRV A Sbjct: 458 KSPESLLSAADRALYVAKGAGRNRVHTA 485 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 90/395 (22%), Positives = 167/395 (42%), Gaps = 21/395 (5%) Query: 24 EQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY--LSDLQNQ-HDIIEILTVQRK 80 ++ N AA + + ++ PY V+ + ++ L +L Q I ++ +R+ Sbjct: 231 GKVTLWNRAAVEIFG-WSAEEVLGKPYPVAPAERAAEHRKLRELVLQGKRITDVELRRRR 289 Query: 81 EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSA 140 ++ + + L P+ G + + ++ R ++ Sbjct: 290 KDGSPIDVSL------SAAPICDGSGTPLGVITIISDISARKRNEQELVLLKRAMESSIN 343 Query: 141 PMLLID-PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG 199 + + D D I+ N A GY + + K+ + R + ++ Sbjct: 344 GITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRG-DDRDQAELKKLVQAFKE 402 Query: 200 HKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHH 255 + FV + DGS + + P+ + + +++DITE +R EEQL + A H Sbjct: 403 EREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATH 462 Query: 256 DAMTGLLNRRQFYHITEPGQM-QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCAL 314 D +TGL NR + ++ +D D FK +ND GH+ GD +L A+ Sbjct: 463 DPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAV 522 Query: 315 ARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAK--VSISGLPRFT 371 A L++C R GD V R GG+E++++LP + +++A+ + A + + T Sbjct: 523 ANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVT 582 Query: 372 VSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 SIG+A E++D L K D A+Y AK G+N Sbjct: 583 ASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 Score = 77.2 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%) Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 E ++ + L ++ + V F GI T + +K Sbjct: 161 EAEGIRSDGSRFPAALSLSRVQM---KGVWHFLGIVRDVTESRETGERLRETNEKLDT-- 215 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 L ++P ++ G++ N AA+ +G++ E + K + E Sbjct: 216 ---LIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYPVAPAERAAEHRKLRE 272 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLE 250 + + + DGS V A PI ++ I+ DI+ +KR E++L Sbjct: 273 LVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQELV 332 Query: 251 HA 252 Sbjct: 333 LL 334 Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 4/121 (3%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHE 192 L + +I G+++ N AA +GY + +I + + P++ Sbjct: 88 LLLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTP 147 Query: 193 ISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 + H L +DGS +++ G L IV D+TE + E+L Sbjct: 148 LVCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRETGERLR 207 Query: 251 H 251 Sbjct: 208 E 208 >UniRef50_B7GIF3 Response regulator with a diguanylate cyclase output domain n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIF3_ANOFW Length = 421 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 147/378 (38%), Gaps = 30/378 (7%) Query: 44 QLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEET---ALSCRLVLRKLTETEP 100 + G E + + ++ I I+T + + A+ + L + Sbjct: 62 PILNGL-------EFIRRIREIDKHVQI--IITTAYDDNDFFIRAIEYGVNRFILKPIDH 112 Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 + ++ R + +KQ Y R + ++ I +++D NL+ Sbjct: 113 EKFLQSLQHSIYQ-----RQLERELEKQKQYTRTIIDFQENLICILNDE--RLLDCNLSF 165 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPI--------MHEISHLPGGHKPLNFVHKLADG 212 +F+G E + Q ++ V + L P V Sbjct: 166 QHFFG--QEQLKQLRAGRTHVCDYFVHEPGYFYIKGERRWLRPLIDRTIPFLKVKMCKQA 223 Query: 213 STRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE 272 A + ++ + DIT + ++ E A D +T NR +F Sbjct: 224 EEHVFLVKATSFPDEPNSYLV-VFTDITALEEESKRNEFLATKDPLTKTFNRLKFDEFFT 282 Query: 273 PGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWG 332 + +S++L D D FK +ND YGH GD VL + + + R D++ RWG Sbjct: 283 REIHRAKRYKHTFSIILFDIDHFKKVNDTYGHDVGDLVLVRMCEAISNRLRDCDILARWG 342 Query: 333 GEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV 392 GEEF++L P T A LAE +R V V + T S GV +E + +++ KR Sbjct: 343 GEEFIILAPATSQTGAYRLAEALRHLVETVHFPTVGHMTCSFGVCEYEQGMTKEQMVKRA 402 Query: 393 DDALYRAKNDGRNRVLAA 410 D+ALY AK GRNRV+ + Sbjct: 403 DEALYEAKRTGRNRVVVS 420 >UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TV39_SHEHH Length = 295 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 8/280 (2%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH--EI 193 + + + + V AN L+ +G E + + N ++PI+ ++ Sbjct: 15 ALDHVQSFVYIKNCKLEYVYANKHTLDLFGCTAENL--NLADDSNFFSPDIVPILRAVDL 72 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK----LMLCIVHDITEQKRLEEQL 249 L G + R P+ D +L I DIT K LEE+ Sbjct: 73 RVLSGESTREEVIVDDGHPEKRIYLNVKTPVYCDSDPECIIGILGISTDITFAKLLEEKA 132 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 A D +TGL NR + + + S++++D D FK +ND YGH GD+ Sbjct: 133 LKLAKTDVLTGLANRLELDSVLSYEIERLKRFQHPLSIIMLDLDHFKTVNDNYGHLLGDK 192 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR 369 L +A+ +++ R D V RWGGEEF+++ P T + A+ LAE R + + + R Sbjct: 193 CLINIAKMMKNNFRLIDTVGRWGGEEFLIICPETDFNGAIKLAEKFRRLIEEHIFPEVKR 252 Query: 370 FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 T S+GV ++ + L R D ALY+AK GRNRV A Sbjct: 253 ITGSLGVTSFIEGDTHETLVNRADKALYKAKKAGRNRVEA 292 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 11/303 (3%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + ++ N R + A F + +++ D RD QIVD N A GY+ Sbjct: 122 LIVRVRNLIQRNADRIQLRLAAHVFEYSGEAIMITD--RDNQIVDVNAAFTTLTGYHKSE 179 Query: 171 MCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + K+ ++ GR + GG F + DGS + Sbjct: 180 VLSKNPKFLSS-GRTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRA 238 Query: 229 DKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 + L D++ K E ++EH AHHD +TGL NR E + +++ + Sbjct: 239 GDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLA 298 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 ++ +D DRFK IND GH GD++L +A L++ R+ D+V R GG+EFV++L + Sbjct: 299 VVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMP 358 Query: 347 T-ALSLAETIRVSVAKVSISGLPRF-TV-SIGVAHHEG-NESIDELFKRVDDALYRAKND 402 + A ++AE IR+ + + G T SIG+A + G E +D+L K D A+Y K++ Sbjct: 359 SVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSE 418 Query: 403 GRN 405 G N Sbjct: 419 GGN 421 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 69/168 (41%), Positives = 93/168 (55%) Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 +E + L A D +TGL NR +F + Q SL++ D D FK +N Sbjct: 552 SELQERAAALARQATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVN 611 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D YGH GD+VL L++T + R+ DL+ RWGGEEF +LL L A+ +AE +R V Sbjct: 612 DRYGHPTGDQVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLV 671 Query: 360 AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 A+ + T S GVA +ES D L +R D ALYRAK++GRNRV Sbjct: 672 ARTPFDQIGSVTASFGVAECRPDESADSLLERADAALYRAKSNGRNRV 719 >UniRef50_Q7UR09 Probable response regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UR09_RHOBA Length = 824 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 17/275 (6%) Query: 147 PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--------RVMPIMHEISHLPG 198 +GQ+ N E M +H W+ + LG V P+ + Sbjct: 398 TDCEGQVTFWNETLARMTSVASEAMVGRH-WDADTLGMVDESGNESAVCPVADSLRLQTT 456 Query: 199 GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHA---AHH 255 + + VH A R V P+ L +V D++++ +L+ Q++ A Sbjct: 457 VTRTMKIVHGSAS---RDVLLQVSPVSDPYGGGALVLVRDMSDRNKLQSQIQTLHKKATS 513 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +TG+ NR +F +SL++ D D FK +ND++GH GDE L A Sbjct: 514 DPLTGIANRAEFDSRLVRATADSKKNNSTFSLIICDIDHFKQVNDVHGHPAGDEALVQFA 573 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL--PRFTVS 373 R LES AR DLV R+GGEEFV L + TA AE IR ++ + GL TVS Sbjct: 574 RVLESHARDEDLVARYGGEEFVFLAINSDNATAARRAEQIRKAIEVTPLDGLNGESVTVS 633 Query: 374 IGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 GV ++ ++ + + R D AL +AK +GRNRV+ Sbjct: 634 FGVTEYQTGDAAETILARSDRALLQAKENGRNRVV 668 >UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Tax=Proteobacteria RepID=Q88M14_PSEPK Length = 973 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 135/305 (44%), Gaps = 13/305 (4%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 L A R A ++ + +I +G I N AA + Sbjct: 384 LLAQRQAFASALQEEKERAQITLQAIGDAVITTDVEGNIGYMNPAAEQLTHWQSGQAQGL 443 Query: 175 HTWEINML-------GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 + L R + L GG + + +L DGST + PI Sbjct: 444 PLSALFSLVDEHAEEDGRSLVEQVLSGSLKGGSEHARLIQRL-DGSTVSINLVGSPILND 502 Query: 228 GD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 G ++ ++HD+T++++ L A HDA+TGL NRR+F + E A +S Sbjct: 503 GQVSGIVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALNDLARQAGRHS 562 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 L+ +D D+FK +ND GH+ GDE+L + L+S R+GD + R GG+EF +LL P D Sbjct: 563 LMFLDLDQFKLVNDTCGHAAGDELLRHICAVLQSGLREGDTLARLGGDEFGVLLENCPPD 622 Query: 347 TALSLAETIRVSVAKVSISGLPR---FTVSIGVAHH-EGNESIDELFKRVDDALYRAKND 402 A + E +R V + R TVSIG+ H + +++ + D A Y AK Sbjct: 623 QAERIGEQLRQMVQSLHFVWKGRPFVTTVSIGLVHMAQAPGTLEASLRAADMACYMAKEK 682 Query: 403 GRNRV 407 GRNRV Sbjct: 683 GRNRV 687 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 10/297 (3%) Query: 117 ASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 A+R + +++ + +P ++ + +G I N GY + + K Sbjct: 351 AARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKK 410 Query: 176 TWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-- 231 I GR + + G +++ DGS PI + Sbjct: 411 PS-ILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITH 469 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + + DI+ +K EE+L A++DA+TGL NR + Q + +L+L+D Sbjct: 470 YISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLD 529 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALS 350 D FK +ND GH+ GD +L A L C R+GD V R GG+EFVLLLP T +A Sbjct: 530 LDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEV 589 Query: 351 LAETIRVSVAKVSISGLPRFTV--SIGVAHHEGNE-SIDELFKRVDDALYRAKNDGR 404 +AE I + + G + SIG+A +E L + D A+YR+K +G+ Sbjct: 590 VAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGK 646 Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 24/245 (9%) Query: 24 EQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEE 83 ++YAN A+++M + T S + + DL + + + R E+ Sbjct: 136 GTIVYANRQAQIMMG----APTPTDLIGRSIIEIIDPACHDLVAK----RLKLLARGEQL 187 Query: 84 TALSCRLVL-----RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTN 138 + RLV ++ T + + G A ++ S + Q F Sbjct: 188 PLVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRDISARKQAEAASQAAKDHFLAFA 247 Query: 139 -SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI----MHEI 193 S P LI +G+IV N A YG+ + + ++ R I + + Sbjct: 248 RSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLS--RLIPERYHAINAAWVKRM 305 Query: 194 SHLPGGH----KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 + G H KP+ G V+ G G DI+++K+ EE+L Sbjct: 306 AKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAARDISKRKQSEEKL 365 Query: 250 EHAAH 254 H + Sbjct: 366 RHLSQ 370 Score = 64.1 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 8/148 (5%) Query: 113 LGLKASRSANYQ-RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHET 170 + R+A + R+ + + R +L+ + G IV AN A G Sbjct: 100 TDISERRNAEVRLRESEERFRRLVELAPDAILV---HQGGTIVYANRQAQIMMGAPTPTD 156 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGD 229 + + EI + G PL DG V++ G G Sbjct: 157 LIGRSIIEIIDPACHDLVAKRLKLLARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGH 216 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDA 257 + M + DI+ +K+ E A D Sbjct: 217 RAMQSVWRDISARKQAEAA--SQAAKDH 242 >UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZA4_DESAC Length = 556 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 167/403 (41%), Gaps = 23/403 (5%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 ++ P + ++ AN AA L YS + + ++ I + + Sbjct: 160 LIDPDDGSIVDANQAACLFYG-----------YSHDQLTQRSLFDLNVDTDQAIQDKINQ 208 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEG--IEAPATLGLKASRSANYQRKKQGFYARFF 135 R L E + +F G I + TL N + + + + Sbjct: 209 AYTGATPCYRVRHQLAD-GEIRTIEVFSGPIILSDRTLLYSIIHDINERVQIEDHLRKIT 267 Query: 136 -LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EI 193 +P ++ +RDG++ N + GY E + ++ + R Sbjct: 268 TAVEHSPASIVITNRDGRVEYVNQSFTRITGYTAEEVLGENPRVLRARPRPPAETRQMWQ 327 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 + L G F ++ +G + + P+ + ++ + I DIT QK LE+++ H Sbjct: 328 TILDGKIWRGLFYNQRKNGESYWEKAAIAPVLDHQHQISHFVAIKEDITRQKALEDKIWH 387 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 AHHD++T L NR FY + +L+ +D D FK +ND GH GD +L Sbjct: 388 QAHHDSLTDLPNRVLFYQYLGDVVLHAQRQDIGAALMFVDLDCFKEVNDSLGHDYGDLLL 447 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA-LSLAETIRVSVAKVSIS---GL 367 +A+ L+ R+ D V R GG+EF +LL T + A LS+AE + + Sbjct: 448 QQVAKRLKDSVRQTDQVARIGGDEFTVLLCHTSDNQAILSVAEKVLNQL-NRPFDLNGHQ 506 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + SIG+A + + L ++ D A++ AK GRN+V+ A Sbjct: 507 AQISGSIGIARVCKGHTTETLVRQADHAMFAAKKAGRNQVIMA 549 Score = 94.9 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 4/120 (3%) Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F + + M+LIDP DG IVDAN AA FYGY+H+ + Q+ +++N+ I +I Sbjct: 150 LFYNSHSMMMLIDPD-DGSIVDANQAACLFYGYSHDQLTQRSLFDLNV--DTDQAIQDKI 206 Query: 194 SHLPGGHKP-LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHA 252 + G P H+LADG R ++ ++GPI + L+ I+HDI E+ ++E+ L Sbjct: 207 NQAYTGATPCYRVRHQLADGEIRTIEVFSGPIILSDRTLLYSIIHDINERVQIEDHLRKI 266 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 130/282 (46%), Gaps = 18/282 (6%) Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH 200 P+ ++D + ++V N A + G C K ++ + +S L G Sbjct: 37 PIYVVD-AGTRELVSLNHAMRSKTGAEPGQTCHKAIYDQPAPCHFCQ--IGALSALGGQA 93 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEI-YGDKLMLCIVHDITEQKRLEEQL---------- 249 D Q I+ G ++ + DI K + +L Sbjct: 94 PSTIVFEHFNDRDNCWYQLSETLIDWFDGRRVKHSVAVDIGALKNAQNELSEAYAMLALK 153 Query: 250 ----EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E A+ DA+TGL NRR+ + A+ SL++ D D FK +ND++GH Sbjct: 154 SVELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDHFKSVNDIHGHH 213 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365 GDEVL A+A L R D+V RWGGEEF+++ P T LD A +LAE +R ++A Sbjct: 214 VGDEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQFP 273 Query: 366 GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 G+ + S GVA ++ ES + R D ALYRAK +GRNR+ Sbjct: 274 GIGTSSASFGVAQYQDGESFKDTVARADTALYRAKVNGRNRI 315 >UniRef50_D0L073 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Proteobacteria RepID=D0L073_HALNC Length = 423 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 103/413 (24%), Positives = 162/413 (39%), Gaps = 19/413 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 +TLD L PV ++ +EQ+IYAN AA L+Q Q+ S ++ L + Sbjct: 12 DTLDRL--PVSVLILLKEQIIYANPAALSLLQADAPEQVL-----GHSVEDFLHPLDYQR 64 Query: 67 NQHDIIEILTVQRKE---EETALSCRLVLRKLTETEPVIIFEGIE-APATLGLKASRSAN 122 I Q E +C LR + + +G A RS Sbjct: 65 VMARIRRAERTQFTNPPTEYRIYTCTRELRIIGMMSTTYMIDGQPGLLAAFMDMTERSVI 124 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 QR ++ + N+ + +G A GY + + + Sbjct: 125 EQRLRESDEQFHRMMNTMQDVFYRTDAEGITRFVCPAVKEILGYTASEIIGRPASDFYPN 184 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 + I G + + DG + + I K + I DIT Sbjct: 185 PHDRENLKKAILG-HGFVRDFPGQMRRKDGRIIDISISSTVILDEEGKYAGVEGIWRDIT 243 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ +LE +LE A D +TG+ NRRQ + + + + + ++D D FK++ND Sbjct: 244 ERMQLERELERLATTDELTGIANRRQILQQLDHAYKRFIRLNHSLVVFILDLDFFKNVND 303 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 YGH GD +L ++ R+ D + R GGEEF+L+L T +TA + + I V Sbjct: 304 QYGHVSGDILLKEFIARVQQQIREIDYLGRLGGEEFLLILDETSKETAEQIGQRILQVVR 363 Query: 361 KVSIS----GLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNRVL 408 + TVSIG + I EL + D ALY AK+ GRN++ Sbjct: 364 QTPFDLGAGVSVTITVSIGATSACHKDAKITELLEHADKALYAAKDSGRNKIC 416 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 16/296 (5%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 ++ +RK R ++ ++ ++L+ +I++ANLA Y + Q ++I Sbjct: 301 ASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDI 360 Query: 180 NMLGR-----RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 R R+ I+ E G H + DGS V A + +++ Sbjct: 361 MEDDRSGVDWRINRILSEKVCFLGEHTV-----RAEDGSMVEVDLNANLVSYGEQQVICM 415 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 ++ DI+E+KR E +L H AHHDA+TGL NR F+ G + + +++ +D DR Sbjct: 416 VLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDR 475 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAE 353 FK IND GH GD +L +A L RK D + R GG+EF +++ +L +AE Sbjct: 476 FKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAE 535 Query: 354 TIRVSVAKVSI---SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I + V T S+GV + ++ ++L K D A+Y AK +GRN Sbjct: 536 KI-LHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN 590 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 15/302 (4%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT-- 176 R + + L +A + +G +++A+ A G + + Sbjct: 314 RLVDANDRANERSR--ILLQNASDGIHITDAEGIVIEASDAFCRMLGRSRSEVIGMRAGS 371 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 W+ + ++ E+ H+ DGS V+ A P+E+ G ++ Sbjct: 372 WDACHPEPDMRALISEL-FASSEVHTFETAHRRKDGSVYPVEVTAFPLEVDGRTVLFNSA 430 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DI+ +K E ++ A+ DA+TGL NRR E Q +LL ID D FK Sbjct: 431 RDISARKSAEAEVRKLAYFDALTGLPNRRLLMERLERAQASCARQGTVGALLFIDLDNFK 490 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALS 350 +ND GH +GD +L +A L C RK D V R GG+EF+++L + A + Sbjct: 491 AVNDTVGHQEGDRLLVQVAAILVRCVRKDDTVARLGGDEFIVMLEELGGEGREAAEQAAA 550 Query: 351 LAETIRVSVAKVSISG--LPRFTVSIGVAHHE--GNESIDELFKRVDDALYRAKNDGRNR 406 + I ++ + G R +VSIGV+ +E +DE +R D A+YRAK GRN Sbjct: 551 VGSKILAALNQRFQLGSSEHRTSVSIGVSLFGELADEPVDEPLRRADMAMYRAKLGGRNA 610 Query: 407 VL 408 V Sbjct: 611 VC 612 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 22/327 (6%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 LR+ +ET + + A +A F T +P+ D G Sbjct: 259 LRRSSETLEMRVAARTRELAEQHARAEEMTLVAEAALRFSESLIDTIPSPVWFKDAL--G 316 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL-- 209 ++ +N A +G + + + + + G +F + Sbjct: 317 RVQTSNRAFRALFGDGEPKLL-----------LPLEDTVTDAELMSGACDQASFEAPILP 365 Query: 210 -ADGSTRHVQTYAGPIEIYGDKL-MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 + G + + ++ G + ++ ++ DI+++K +E +L A D++TG NRR F Sbjct: 366 PSGGRLDTMVLKSAYLDDEGRPVGVIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHF 425 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 + +LL++D D FK IND +GH GD+ L L L R D+ Sbjct: 426 LAAAGTELERANRYGNPLTLLMLDVDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDV 485 Query: 328 VFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGVAHHEGNE 383 + R GGEEF +LLP T + AL AE +R VA + + G FTVSIG+A + Sbjct: 486 IGRLGGEEFAVLLPETGMAGALITAERLRAQVADLRLDLPDGGQLAFTVSIGIAAPRAED 545 Query: 384 -SIDELFKRVDDALYRAKNDGRNRVLA 409 S++ + R D ALYRAK++GRNRV A Sbjct: 546 GSVEAVLARADKALYRAKDEGRNRVCA 572 Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 46/152 (30%), Gaps = 7/152 (4%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 +A G S+ RF L M L+ G I N A + G Sbjct: 119 ATDATVVTGRDMSKEGKLAGSAHKTDTRFHLLVDNSMNLVCHVVGGSIRYVNKAGIALLG 178 Query: 166 YNH-ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 E + EI ++ +I+ G PL +H+ DGS + Sbjct: 179 ATEAEQVIGLRLEEILHPDYA--DLIGDIAK-EGAAVPLRLLHR--DGSAFDALVRLTEL 233 Query: 225 EIYGDKLMLCI-VHDITEQKRLEEQLEHAAHH 255 G L + DIT R L ++ Sbjct: 234 PAGGMGTELMVEARDITGHNRAVAALRRSSET 265 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 160/396 (40%), Gaps = 34/396 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 ++ E ++++ N AA++L + + L ++ EI + Sbjct: 385 LILDREGKVLFVNPAAEILFGRPKKDLM-------------GQILGLPIIVNNYSEIEIL 431 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q + R V I++E EA + + Q++ + T Sbjct: 432 QPTGKMVIARIRQV---------KILWEEKEAFLASLVDVTDLKGAQKQLKILKQ---AT 479 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL- 196 +P+ +I +G I N GY + + K+ + G+ ++ Sbjct: 480 EQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNPRLLKS-GKISQDQYKQLWRTL 538 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAA 253 G F ++ +G PI+ + + I DIT +K + L + A Sbjct: 539 TSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITRRKAQDRILAYQA 598 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+TGL NR + +Q Q +++ ID DRFK++ND GH GD +L Sbjct: 599 NYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQ 658 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVS--ISGLPRF 370 +A L+ C RK D V R GG+EF++++P +A+ I S+ K + Sbjct: 659 VAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFI 718 Query: 371 TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + SIG+ + + + ++ L + D A+Y K GRN Sbjct: 719 SASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRN 754 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 76/226 (33%), Gaps = 31/226 (13%) Query: 40 LTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI--LTVQRKEEETALSCRLVLRKLTE 97 L + S + ++ + K + ++ + ++ Q LS L + + Sbjct: 274 LDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIGNQLYEGIQQVLLTRQPLSLEYSL-NIED 332 Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQ-------RKKQGFYARFFLTNSAPMLLIDPSRD 150 + ++ T + R + + R+ + + TN +L++D R+ Sbjct: 333 KKRFFEARIVQLNQTEIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILD--RE 390 Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA 210 G+++ N AA +G + + + + + + + + + Sbjct: 391 GKVLFVNPAAEILFGRPKKDLMGQ---------------ILGLPIIVNNYSEIEILQPT- 434 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE--HAAH 254 G + I + L + D+T+ K ++QL+ A Sbjct: 435 -GKMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQKQLKILKQAT 479 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 15/187 (8%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 ++I T + + + S + +R+L ++ G L Q+ + Sbjct: 190 LQIQTSLQIKYGNSPSNKKRIRRLNQSITEKELSGKSIGYLNNLT---DMTEQKNAEEVT 246 Query: 132 ARFF-----LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI--NMLGR 184 L ++ P +L + G I+D L E + K E+ +G Sbjct: 247 THINQEIQALFDAFPDILFRINDQGIILDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIGN 306 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 ++ + ++ L L + + D I ++ ++ DI+ +K Sbjct: 307 QLYEGIQQV-LLTRQPLSLEYSLNIEDKKRFF----EARIVQLNQTEIIAVIRDISARKH 361 Query: 245 LEEQLEH 251 E L Sbjct: 362 TELALRE 368 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 11/296 (3%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + Q YA F + +L+ D +R I+ N A N GY + + + I Sbjct: 650 ARKKQEDALRLYASIFEHSGEAILIADQAR--HIIAVNPAFTNLTGYALDDIRGEEP-TI 706 Query: 180 NMLGRRVMPIMH--EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 G+ S G+ + + DG+ + L + Sbjct: 707 LAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVAS 766 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DITE+K E Q++H A+HD +TGL NR + + +++ +D DRF Sbjct: 767 FTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRF 826 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K IND GH+ GD++L +AR L R D+V R GG+EFV++L A +A+ Sbjct: 827 KSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADK 886 Query: 355 IRVS-VAKVSISGL-PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 + + V + I G T SIG++ + + D L K D A+Y AK+ GR+ V Sbjct: 887 LLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNV 942 Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 53/154 (34%), Gaps = 6/154 (3%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 A + L+A + ++ + + A L++ R+G+I N A Sbjct: 379 MADTLAASYDNLEAEVEKRSRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEAL 438 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISHL----PGGHKPLNFVHKLADGSTRHVQT 219 Y+ + + W+ R + + L L DG R ++ Sbjct: 439 TQYSFSEVEGRQVWDFIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEW 498 Query: 220 YAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 + K+ ++ + +D+T++ R E L+ Sbjct: 499 SNSVLHDAQGKVEFVVAVGNDVTDKMRAEAALKE 532 >UniRef50_A8MEQ5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEQ5_ALKOO Length = 541 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 8/294 (2%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R + ++ F N + +ID ++G N GY + + K+ Sbjct: 252 RDITKEYLQEKEIDSFLNINMEMLCVID--QNGNFHKINKKFEKILGYTSDDIIGKNFLS 309 Query: 179 INMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 + ++ EI S ++ DG+ + ++ Y + + Sbjct: 310 F-VHPEDILATSEEIRNSCNSEEISVFTNRYQCKDGAYKCIEWYR---QFVAGRYTYSSA 365 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 D+TE+ E QL + A D +TGL NR + + A Q ++ ++D D+FK Sbjct: 366 RDVTEKMEKEAQLLNIAVRDELTGLYNRHFLVSYLKNEIEKAEAEDQPMTMAILDLDQFK 425 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 +ND +GH GDE L A+T+ R DL+ R+GGEE V+++ +T +D A + E IR Sbjct: 426 LVNDTWGHPVGDEQLKHTAKTILRVIRSTDLLVRYGGEELVIIMEKTNIDDAKIVLEKIR 485 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +++ R TVSIG A +E + +KR D ALY AKN GRNRV+ + Sbjct: 486 MAIENNQYPITGRQTVSIGAAERAKSELFVDWYKRADQALYHAKNRGRNRVICS 539 Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%) Query: 118 SRSANYQRKKQGFYARFFLTN--SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + + F T S LI +G I N A + G++ + K Sbjct: 123 KERLEEAYITENKLRKLFETTLFSINEGLIVTDNEGAITIINDLAEAYTGWSKKLALGKK 182 Query: 176 TWEINMLGRRVMPIMHEI---SHLPGGHKPLNF---VHKLADGSTRHVQTYAGPIEIYGD 229 ++ L G K F + DG+ +++ G I Sbjct: 183 IDQVLNCISSTSKEKRSDIVPELLKSGKKKETFDQLILISKDGTEKYISGTVGAIVSMDG 242 Query: 230 K--LMLCIVHDITEQKRLEEQL 249 K ++ DIT++ E+++ Sbjct: 243 KTSGVVFSFRDITKEYLQEKEI 264 Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 2/113 (1%) Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV--MPIMHEISHLP 197 AP I + G I + N L GY HE + + H L ++ + L Sbjct: 8 APCGYIKLTPQGIIKEVNYTFLAMTGYGHEDLLEMHFESFLSLASKIIFHSLFFPQVCLK 67 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 GG L K + V E + + C++ ++ EE+L+ Sbjct: 68 GGIDELYLTIKNKNKEEMSVLLIGNMGENNKGETVDCVIVRADKRDDYEEELQ 120 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 15/340 (4%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 E+ R + + L K E +G T K ++ + + + Sbjct: 74 FEVEYKTRYGHKIIAEGSISLYK--ENGEPCGIQGFFRDITARKKTEKAL---QTSEERF 128 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + ++ A + ++ P DG + AN A NF GYN E + Q ++ + Sbjct: 129 RTIYESSVAGIAMLAP--DGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDDIEDTLSR 186 Query: 192 E--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEE 247 + DGS Q + + ++ DIT +K EE Sbjct: 187 RNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDITRRKEAEE 246 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 ++ A++D++TGL NR F + + ++L+ +D DRFK +ND GH+ G Sbjct: 247 RIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVG 306 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL-SLAETIRVSVAKVSISG 366 D +L A L C R+ D V R GG+EFV++L D L +A+ I +++ G Sbjct: 307 DAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLG 366 Query: 367 LPRF--TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDG 403 + + S+G+A + + + +L + D A+Y AK G Sbjct: 367 VREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESG 406 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 4/118 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L ++ L+ DG+I+ AN GY + Q + +++ + I Sbjct: 6 LLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDL-LHADFHCDCQDRIQR 64 Query: 196 LPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGDK-LMLCIVHDITEQKRLEEQLE 250 L G +K G + + G+ + DIT +K+ E+ L+ Sbjct: 65 LMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTEKALQ 122 >UniRef50_Q2S9L1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Proteobacteria RepID=Q2S9L1_HAHCH Length = 1263 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 10/305 (3%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR-DGQIVDANLAALNFYGYNHE 169 + L+ + + R + +L+++ R D +V N A GY+ + Sbjct: 539 GVVSLRTRHAREKAEESLRLRNRAVESTPNGILILNARRPDLPLVYVNPAFERITGYSSD 598 Query: 170 TMCQKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 + K + + ++ R +H + L ++ DGS + + P+ Sbjct: 599 EVLGKGPFFLQSDIDEDRRRESLHFLIRNREEGCVL-LRNQRKDGSPFWNELHIAPVYDD 657 Query: 228 GDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY 285 L + +++D+TE + +EQLE+ A HD +TGL NR + Sbjct: 658 RRMLTHFVAVINDVTESRHYQEQLEYQATHDDLTGLPNRNMMRDRLGQELWRAARNKHKV 717 Query: 286 SLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-P 344 +++ +D D+FK IND GH+ GD +L +A+ L AR D V R+GG+EFV++LP P Sbjct: 718 AIVFLDIDQFKLINDSLGHNAGDAMLKVIAKRLTGMARASDTVVRYGGDEFVIILPDISP 777 Query: 345 LDTALSLAETIRVSVAK-VSISG-LPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKN 401 + S + +A+ + + + SIGV+ + + + + L K D A+Y AK Sbjct: 778 PEKVASFISRLMEVIAQSIQLDHRDIHVSASIGVSIYPQDGDHPEVLIKNADIAMYLAKE 837 Query: 402 DGRNR 406 +GRNR Sbjct: 838 EGRNR 842 Score = 64.5 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 7/125 (5%) Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 ++ + P L+ DG I N ++G + + K + ++ ++HE Sbjct: 48 YILDDIPELICRWKPDGAITYVNAQYCRYFGSSRSALIGKSIFTLSPPEE--CSVIHEQM 105 Query: 195 HLPGGHKPLNFVHKL---ADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL 249 P++ + G+ R + I ++ I DIT+ + EQ+ Sbjct: 106 RRISQTSPVSQQERRVIDGRGAQRWLLWTDRGIFDSQGRVLEFQSIGRDITDSRETNEQI 165 Query: 250 EHAAH 254 A Sbjct: 166 GSMAS 170 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 21/141 (14%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + ++ R+ + + +L+ID + G I AN AA +G E + + Sbjct: 264 SQQKQNEVALRQSENRLGALVSAEADSILVIDDA--GVIRFANPAAERIFGKPKEMLIGQ 321 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 + L G + + F G R + A P+ + L Sbjct: 322 AFG---------------VPCLTGDYAEVEF----PRGGKRIAEMRAQPLPWNDIQAHLI 362 Query: 235 IVHDITEQKRLEEQLEHAAHH 255 +HD+T+ ++ E L+ Sbjct: 363 TLHDVTDHRKREHLLQRRNRT 383 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 15/315 (4%) Query: 110 PATLGLKASRSANYQRKKQGFYARF---FLTNSAPMLLIDPSRDGQI--VDANLAALNFY 164 + L + + R +++ + + S + + + + + Y Sbjct: 518 DSYLAVGSVRDITERKRLEQELRHYANRLTLASKAGGIGVWEWNLRTNDLKWDDQMFRLY 577 Query: 165 GYNHETMCQKH-TWEINMLGRRVMPIMH--EISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 G + W+ + + + +I+ G F R ++ A Sbjct: 578 GLESGEFDGIYEIWKSRVHPDDLYNVEQSLQIATEHTGFWESEFRVIWPSNQVRCIKAAA 637 Query: 222 GPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 + K L++ + D+TE + E QL A D MT L NRR F + + + + Sbjct: 638 LIEKNADGKPELLIGVNWDVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSI 697 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 ++ SL++ D D+FK +ND YGH GD VL A+A T + R D++ R GGEEF + Sbjct: 698 RYSRPLSLVMFDVDKFKAVNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVG 757 Query: 340 LPRTPLDTALSLAETIRVSVAKVSIS----GLPRFTVSIGVAHHEGN-ESIDELFKRVDD 394 LP T L A+ LAE +RV + + S+ G+ FTVS+GVA + + +D L K D Sbjct: 758 LPETDLKGAMLLAERLRVVLEEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADL 817 Query: 395 ALYRAKNDGRNRVLA 409 ALY AK +GRNRV A Sbjct: 818 ALYAAKENGRNRVEA 832 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 17/254 (6%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDL-TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEIL 75 W + E++ +++ ++ D TF + ++ K+L Q+ D Sbjct: 300 WRLDHINEEIWWSDETYRIFGVDKNTFVPTLERFLDMVHPDDMQKFLDAFQSSTDSCS-- 357 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEG----IEAPATLGLKASRSANYQRKKQGFY 131 + + + +R + E + A T+ R+ + + Sbjct: 358 --EYEVNHRIIRPSGEIRHVQERGGTVCLLSGKTPTHAMGTVLDVTERALAEEELRASEE 415 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR---RVMP 188 ++ S+ +I + I N AA +G+ E + K ++ +V Sbjct: 416 KMRAMSESSYDAVIVVDVNDVISFWNSAAEKMFGWKAEEVIGKQLHQLISPKEYHHQVTK 475 Query: 189 IMHEISHLPGG---HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL 245 M + + G + +G + ++ L + V DITE+KRL Sbjct: 476 GMKDFAQTGQGPLIGRVKEMPAVRRNGEVFLAERSVTSFKLGDSYLAVGSVRDITERKRL 535 Query: 246 EEQLEHAAHHDAMT 259 E++L H A+ +T Sbjct: 536 EQELRHYANR--LT 547 >UniRef50_Q2SHY3 FOG: GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHY3_HAHCH Length = 658 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 13/358 (3%) Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 +SD + D ++ T++ S ++ E E ++ + + A R Sbjct: 289 ISDTPHAFDDEDLKTLEMMAGLIG-SAIGRKIRMQEKEDLLAAKSLTLMQLEQEVAQRKQ 347 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ K + S+ I + G I D N A +G+ + E+ + Sbjct: 348 IEEQLKASEMRTRRIIESSHEAFIAMNSSGFITDWNPKAEETFGWTATEAIGRKLSELII 407 Query: 182 L-GRRVMPIMHEISHLPGGH-----KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI 235 G R + + G K L + G V+ I Sbjct: 408 PSGLRERHELGMRKFIETGQGIVLGKRLELLALNIKGEKIPVEITISAISAQEQWQFCAF 467 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 +HDI+E+K+ E++L H A +D++T L NR FY + ++L+ +D D F Sbjct: 468 LHDISERKQTEQKLRHLAQYDSLTSLPNRALFYDRLNQALARSHRNQTLFALMYLDIDHF 527 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAET 354 K IND +GH GDE+L A + + R+ D + R GG+EFV++ + A +A+ Sbjct: 528 KSINDTHGHGVGDELLSAFSSRIRLIIRESDTLARLGGDEFVIIAENISVQGDAEHIAQK 587 Query: 355 IRVSVAKVSISGLPRFTV--SIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN--RV 407 I ++ + V SIGVA + + D+L K D ALY AK GRN RV Sbjct: 588 ILWAMKQAFQLNELSIQVGTSIGVALPPPHAVNADDLVKMADKALYSAKAAGRNTYRV 645 >UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFL9_THIDA Length = 843 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 139/315 (44%), Gaps = 14/315 (4%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 ++G + RSA +++ +A +P ++ ++ N A Sbjct: 518 YQGTLIALIDITERIRSAEALHRREQEFAALVER--SPDIIARVDASLRLRYVNPAIERL 575 Query: 164 YGYNHETMCQKHTWEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 G + K E + R+ G + + + +G R QT Sbjct: 576 TGRPRDWFIGKTPGERELSPEEARLREATLRAVFESGEERIVEQRNPSLNGE-RIFQTRL 634 Query: 222 GPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 P K+ +L + DI + KR +E LE D +TG+ NRR M+ Sbjct: 635 VPEFGPAGKVESVLVVERDIDDLKRAQEALEELTLLDPLTGVANRRFLERFVGREWMREA 694 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVL 338 + +++D D FK ND YGH++GD L +++TL R D++ R+GGEEF++ Sbjct: 695 RQRLPIAAVMVDIDHFKDYNDHYGHAQGDACLRTVSQTLRGALHRPADILVRYGGEEFIV 754 Query: 339 LLPRTPLDTALSLAETIRVSVAKVSISGL-----PRFTVSIGVAHHEGNE-SIDELFKRV 392 LLP + L A +AE +R +V +++ R T+S+GVA + +E D+L Sbjct: 755 LLPESDLAAAREIAERLRQAVEALALPHPTSPIGDRVTISLGVAAVQAHEGEFDQLLIAA 814 Query: 393 DDALYRAKNDGRNRV 407 D ALYRAK GRNRV Sbjct: 815 DAALYRAKKKGRNRV 829 Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 4/164 (2%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 L R + E + E + A + R+ + + Y + L+D Sbjct: 379 LEARIVPEFDASGAVETVLAITRDLTERKRAEEALQASERKYRALVENLYEGVWLLDTEA 438 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL 209 D N GY M + + + + + G +F + Sbjct: 439 DTT--FVNARLAELLGYPATEMLGRSVFSFMDPEQVEAMRGNLLRSAAGTRAEYDFEFRC 496 Query: 210 ADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 G + A PI G + L + DITE+ R E L Sbjct: 497 KSGEPIWTRVAATPIVDEGGRYQGTLIALIDITERIRSAEALHR 540 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 7/143 (4%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + R R+++ + +S ++ R+ + + N A ET+ Sbjct: 275 VEEITERRRLEETRQREQAFRSLAENSS--DIISRFDRELRRIYVNPAIEAILDRPRETL 332 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGD 229 K ++ + + ++ + +PL V G R+++ P Sbjct: 333 IGKTHHDLGLPEALAAALDRPLAMVFETAQPLAAEAVVPTPKGE-RYLEARIVPEFDASG 391 Query: 230 KL--MLCIVHDITEQKRLEEQLE 250 + +L I D+TE+KR EE L+ Sbjct: 392 AVETVLAITRDLTERKRAEEALQ 414 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 9/150 (6%) Query: 115 LKASRSANYQRKKQGFYAR-----FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 + A+ R+ + Y R + +AP+ L + V N F E Sbjct: 146 TEREAGADALRQSEARYRRQAAELELIYRTAPVGLCVLDTQLRYVHINEHLAEFDRLPVE 205 Query: 170 TMCQKHTWE-INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 K E + RV P++ + L + G RH + P++ Sbjct: 206 EHLGKTIRETLPDTAARVEPLLRRVLETGEPVLDLEGRGETEPGVWRHWNSQYWPLKSAD 265 Query: 229 DKLML--CIVHDITEQKRLEE-QLEHAAHH 255 ++ +V +ITE++RLEE + A Sbjct: 266 GRVYGINVVVEEITERRRLEETRQREQAFR 295 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 89/321 (27%), Positives = 134/321 (41%), Gaps = 16/321 (4%) Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 R+L +T + E + L+ + + Y + + + + + Sbjct: 536 RQLEKTARQLAKEKHQ-----RLRVQELIDNIDAAESRYQLLIENSLVGIFV---YQHHR 587 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG----HKPLNFVHK 208 N +GY E + + + + + GG H FV Sbjct: 588 YTYVNPRFAEIFGYTPEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGL 647 Query: 209 LADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFY 268 G V+ G G ++ + DITE+K E+ +EH A HD +TGL NR F Sbjct: 648 RKTGQPIDVEILIGRGISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFM 707 Query: 269 HITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLV 328 E + ++L+ +D DRFK IND GHS GD L +A+ L +C R+ D V Sbjct: 708 DRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTV 767 Query: 329 FRWGGEEFVLLLPRTPLDTALSL-AETIRVSVA-KVSISGLPRF-TVSIGVAHHE-GNES 384 R+GG+EF +LL + + L A I S+A I+ F T SIG+A + Sbjct: 768 SRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGRE 827 Query: 385 IDELFKRVDDALYRAKNDGRN 405 L K D ALYRAK+ GRN Sbjct: 828 AITLVKNADTALYRAKDLGRN 848 >UniRef50_Q2BH87 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) (Fragment) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH87_9GAMM Length = 296 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 13/280 (4%) Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH 200 P +I G + N AA GY+ + K + + ++ + Sbjct: 4 PDPVIGVDGAGVVQLFNAAAEKLLGYSSGEVVGKLSISKIYPDLESAKKIKKLMYSDSYG 63 Query: 201 KPLNFVH-----KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHH 255 + DG ++ A I G+ + HD+TE++ LE+QL + Sbjct: 64 SSGSIEGYEAQLVHKDGEHVPIRLSAA-IVDEGEGSSIGFFHDLTERQNLEKQLHKLSVT 122 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +TGL N+R FY + + SL+ +D D FK +ND GH +GD VL + Sbjct: 123 DELTGLFNQRHFYKVMALELDRAKRYKHPLSLICVDLDNFKKVNDSLGHLEGDRVLRMIG 182 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV-------AKVSISGLP 368 L R D+ R+GG+EF++LLP T + +A AE IR A + Sbjct: 183 DILTETLRNCDVAVRYGGDEFMVLLPETGIKSAAKTAERIRSVFNTKCLYSADHEAETIV 242 Query: 369 RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 ++S+GV G+E+ D++ +R D A+Y +K+ G N + Sbjct: 243 NVSMSLGVTETNGSENADQIVQRADLAMYESKSSGGNNTV 282 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 10/287 (3%) Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVM 187 + L +++P L+ G+ + N + G + + + K ++ N Sbjct: 24 EAFLLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFDFNTPDNAQN 83 Query: 188 PIMHEISHLPGGHKPLNFVHKLAD---GSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQ 242 + + + G +N + D G R + T P+ K ++ I DITE+ Sbjct: 84 YYQDDQTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITER 143 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K+ EEQ+++ A HD++T L NR F + + ++L ID DRFK+IND Sbjct: 144 KQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTL 203 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIR-VSVA 360 GH GD++L +A +C R D+V R GG+EFV+LLP D A +A+ I ++ Sbjct: 204 GHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQ 263 Query: 361 KVSISGLP-RFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 + + G R T SIG+ + + E L K D A+YRAK +G+N Sbjct: 264 PLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKN 310 >UniRef50_B1WQD2 Probable regulatory components of sensory transduction system n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQD2_CYAA5 Length = 484 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 100/397 (25%), Positives = 162/397 (40%), Gaps = 31/397 (7%) Query: 34 KLLMQDLTFS-QLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVL 92 + L QD + SS +L ++ + QRK E L+ Sbjct: 94 RYLNQDNSVGWAFVQAVPEYSSLGQLVGFIG--------STLDITQRKRAEEILTDYSHK 145 Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 + + I + + + + T+S + + G+ Sbjct: 146 LENEVNQRTQELVIINEQLQQEINERKKVELALRNSQKQLKEI-TDSIHAGIAYVDQKGK 204 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLA 210 N + + ETM K+ WE+ +G+ ++ + L G K + F Sbjct: 205 YHFVNKFYELQFNRSRETMIGKYVWEV--MGKETYNNVNHLIDQVLKGESKHIEFDITYE 262 Query: 211 DGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEE-------QLEHAAHHDAMTGL 261 G+T + + P +K++ +V DITE++ LE+ +L + A D +T + Sbjct: 263 TGNTSYSSCFLTPAFDETEKVIGYYTVVFDITERRNLEQSLKKANKKLSYLAVVDDLTEI 322 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NRR+F + L SL+L+D D FK ND YGH KGD+ L +A+ + Sbjct: 323 ANRRRFDDFLNKEWRRLLRTQDPLSLILLDVDFFKCYNDYYGHPKGDDCLVKIAQLANNS 382 Query: 322 A-RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-----FTVSIG 375 R DLV R+GGEEF ++LP T A+ +A+ I ++ I +VS+G Sbjct: 383 VSRCSDLVARYGGEEFAVILPNTDKRGAIIVAQRIHQNIRNARIPHETSKKGSIISVSLG 442 Query: 376 VAHHEGN--ESIDELFKRVDDALYRAKNDGRNRVLAA 410 VA + ES L D ALY+AKN GR+R A Sbjct: 443 VACLIPSLQESPKNLINLADQALYQAKNQGRDRFCVA 479 Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 9/141 (6%) Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK------H 175 + + Q R + P+ + GQ + AN G + E + H Sbjct: 5 SKSSQDQATLYRILC-EAIPLGIFRNDVTGQCIYANQKLQEMSGLSQEEILGDGWKKMVH 63 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 + L + +++ H L + + D S A P +L + Sbjct: 64 PEDQEWLSFIWSHFVEQVNLGHQSHYQLEYRYLNQDNSVGWAFVQAVPEYSSLGQLVGFI 123 Query: 234 CIVHDITEQKRLEEQLEHAAH 254 DIT++KR EE L +H Sbjct: 124 GSTLDITQRKRAEEILTDYSH 144 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 1/171 (0%) Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +++ K+L +QLE A +D +T + NR +F +I + SL+ +D D FK I Sbjct: 580 LSKIKKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKI 639 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND +GH KGD VL + + + R+ D+ RWGGEEF++LLP T ++ A +AE IR + Sbjct: 640 NDNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDA 699 Query: 359 VAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + G+ + TVS+GV + +++I+ R D ALY+AK +GRNRV+ Sbjct: 700 IESHDFDGI-KVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVV 749 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 13/324 (4%) Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 +L + L + R ++ G Y + L +S L+ +G+I Sbjct: 302 ELQSARRSAYLLSLAIENDLNDRQIRQDRQAIEEAGLYRQAIL-DSMVDGLVTLDLNGRI 360 Query: 154 VDANLAALNFYGYNHETMCQKHTWEI--NMLGRRVMPIMHEISHLPG-GHKPLNFVHKLA 210 N AA G + E + E+ L V + +S + G + A Sbjct: 361 HTFNNAACRMMGRDPEAPRPQTLSELLGTQLPLNVQGHLDLLSTVDGIEGASAEVNGRHA 420 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 +G+ R + A I + + DIT+Q++ EE++ A +D +TGL NRR Sbjct: 421 NGAIRPISVSASRIPHTEHDTFVVTLRDITQQRQDEEEIRRLAFYDPLTGLPNRRLLMDR 480 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 + + Q +L+ +D D FK +ND GH GDE+L +A L +C R+GD V R Sbjct: 481 VRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVAR 540 Query: 331 WGGEEFVLLLPRTP------LDTALSLAETIRVSVA-KVSISGLP-RFTVSIG-VAHHEG 381 GG+EFV+LL + A +A I ++A S+ G T SIG V E Sbjct: 541 LGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMED 600 Query: 382 NESIDELFKRVDDALYRAKNDGRN 405 +E++D+L K+ D A+Y+AK GRN Sbjct: 601 HETMDDLLKKADVAMYQAKAAGRN 624 Score = 41.3 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 24/170 (14%) Query: 106 GIEAPATLGLKASRSANY-------QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 G PAT+G R+ N + + L P+ L G ++ N Sbjct: 6 GSGVPATIGCNQHRALNASPDMPDTNLRSLQPHDLIQLLEGVPVPLFVKDTQGHVIYVNR 65 Query: 159 AALNFYGYNHETMCQKHTWEI-NMLGRRVMPIMHE--ISHLPGGHKPLNFVHKLADG--S 213 + + ++L + H+ + G + +G S Sbjct: 66 TWRQSM---APALGGSPAAAVSDVLSAEQLASFHQRDLEAFSAGTTVTHEDEVKGNGQQS 122 Query: 214 TRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQ-------LEHAAH 254 RH T P+ + L++ DITEQ++L++Q LE A Sbjct: 123 ARHTLTTLVPLFDADGQPSLIVGSTVDITEQRQLQQQNAAERGLLEMLAS 172 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 13/315 (4%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 +++ G+ A L + + Q KQ + ++A I +G I D N A Sbjct: 58 LLLLFGVYAQTMLKRQQQIMESLQASKQKIRQ---IIDTANDAFITIDAEGSISDWNPMA 114 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-LPGGHKPLN-----FVHKLADGST 214 +G+ + K ++ M ++ +I + G P DG Sbjct: 115 EMIFGWPEDLAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHE 174 Query: 215 RHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 + P + + V DI+++K EE+LE A D +TGL+NR + H+ + Sbjct: 175 FPAEMSISPQAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKE 234 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + ++L +D D FK+IND GH GD++L A L +C R+ D V R GG+ Sbjct: 235 VALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGD 294 Query: 335 EFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFK 390 EF++++P + L E I + + + G SIG++ + ++++ L K Sbjct: 295 EFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVK 354 Query: 391 RVDDALYRAKNDGRN 405 D A+Y+AK+ GRN Sbjct: 355 NADTAMYQAKDSGRN 369 >UniRef50_Q2BMB7 Sensory box/GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMB7_9GAMM Length = 425 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 12/286 (4%) Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + + +++I+ D I N +A + +G+ + + K + R Sbjct: 136 ERFEAIIESAYDGIVVINGDED--IEYMNESACDMFGFARDEIISKKLDLLIPKKYRSPH 193 Query: 189 IMHEISHLPG------GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 H + H + V DG V+ I + M ++ DI+E+ Sbjct: 194 KAHVDAFKSSPIKSRQMHARASVVGLRKDGEEFPVEVTISKIAVGDGYEMTAVIRDISER 253 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 L E+L AA DA+T NRR I + +S++L D D FK IND Y Sbjct: 254 SALMEELRKAAVEDALTKTYNRRHLDRILHRELARSQRFGHTFSVVLFDLDNFKQINDEY 313 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH+ GD+VL +L + R+ D+ RWGG+EF+L+LP T L+TA AE Sbjct: 314 GHAIGDQVLISLVDAVNDQIREVDVFGRWGGDEFMLVLPETNLETATVWAERFWGLAVDE 373 Query: 363 SI---SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 + ++ S G+ + G+++++++ KR D A+Y+AK +GR Sbjct: 374 FFNLATTDMGYSFSGGITQYRAGDDTVEKILKRCDRAMYKAKENGR 419 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 14/309 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQ-GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 + L + + Q++ Q +A+ F ++ +L+ D + +I+ N A G Sbjct: 211 RDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITD--ANFRIISVNRAYETIMG 268 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEISHLP-GGHKPLNFVHKLADGSTRHVQTYAGPI 224 Y + + T E+ + + +S L GH +++ G + Sbjct: 269 YREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQV 328 Query: 225 EIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 + + I +DITE K Q+E AHHDA+TGL NR E Q Sbjct: 329 TNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQG 388 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 + +L ID DRFK++ND GH GD++L A+ L + R GD V R GG+EFV+L PR Sbjct: 389 EKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPR 448 Query: 343 TPLDTALSLAE---TIRVSVA-KVSISGL-PRFTVSIGVAHH-EGNESIDELFKRVDDAL 396 + +LA+ +R + ++ G+ T SIG+A + + E + L K D A+ Sbjct: 449 VRTEG--NLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAM 506 Query: 397 YRAKNDGRN 405 Y AK GRN Sbjct: 507 YLAKEKGRN 515 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 125/288 (43%), Gaps = 9/288 (3%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ +P ++ DG+I N G+ E + K+ +I G Sbjct: 296 EEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGES 355 Query: 187 MPIMH---EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITE 241 + + + G F + G I+ L I+ DITE Sbjct: 356 LSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITE 415 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 K+ EE++ + A++D++T L NR F+ + Q ++ ID DRFK +ND Sbjct: 416 HKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDT 475 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVA 360 GHS GD +L +A L+SC R+ D V R GG+EFVLLL ++ A + + I + Sbjct: 476 LGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLK 535 Query: 361 KVSI--SGLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 + I + SIG+A + G + + L K D A+Y +K GR+ Sbjct: 536 EPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRD 583 Score = 42.1 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 2/108 (1%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 +G T+ R + G L P ++ +G N A + + Sbjct: 112 DGDSLARTMRYSMERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEA-VQVF 170 Query: 165 GYNHETMCQKHTWEINMLGR-RVMPIMHEISHLPGGHKPLNFVHKLAD 211 GY + + KH E+ + + +S G KL D Sbjct: 171 GYEPDELIGKHFSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFD 218 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 10/271 (3%) Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM--LGRRVMPIMHEISHLPGGHK 201 +I + IV N A + GY+ E + + G+ M G Sbjct: 798 IIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGS-W 856 Query: 202 PLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMT 259 F ++ +G V + ++ + + DI+ K EE + H A++D ++ Sbjct: 857 QGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLS 916 Query: 260 GLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLE 319 L NRR E ++ +++ +D D FK +ND GH GDE+L +A ++ Sbjct: 917 ALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIK 976 Query: 320 SCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR---FTVSIGV 376 R+ D V R GG+EF LLLP D +A+ I ++ K + T SIG+ Sbjct: 977 EFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKILAALRK-PFEHSGQTFAVTGSIGI 1035 Query: 377 AHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + + + L + D A+Y AK GRN+ Sbjct: 1036 SLYPHDGTDFETLLRNADTAMYHAKQQGRNQ 1066 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 1/134 (0%) Query: 120 SANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 + ++++ RF + A ++ RD +IVD N AL+ YGY+ E + + Sbjct: 347 ALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMTLAD 406 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + + L G VH DG V+ I + G + IV D Sbjct: 407 VVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGSDFVQAIVRD 466 Query: 239 ITEQKRLEEQLEHA 252 +TE+KR+E L Sbjct: 467 VTERKRIELALARQ 480 Score = 57.5 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 3/159 (1%) Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 + + + A L A R + R ++ NSAP+L+ Sbjct: 626 DIVAVLDTMAMDVSFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGC 685 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI-MHEISHLPGGHKPLNFVHKLADG 212 N LNF G + E E R I + + + + + DG Sbjct: 686 TFFNDMWLNFTGRSLEYELGDGWLEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDG 745 Query: 213 STRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQL 249 R + A P G + + + DI+++K+ +E L Sbjct: 746 EYRTILGKATPRFDAGGEFIGYIGSCIDISDRKKGDESL 784 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 24/414 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ---DLTFSQLRTGPYSVSSQKELPK 60 +D W+V + +L+ N A L + ++ + + + Sbjct: 259 QYRAAIDTAADGFWLVD-MQGRLLEVNDAYARLSGYSREELIGMSIPELDAIDNSELVRA 317 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + ++ +E T+ ++++ L ++ T + +T + R+ Sbjct: 318 RIEEIIRNGGYLEFDTMHKRKD-----GSLWPVHISTTYSSVSGGRCFVFSTDLTEQKRA 372 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R Y ++ D I+ N A GY + K+ I Sbjct: 373 EESLRLAAMVYENSSEA------ILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPR-IF 425 Query: 181 MLGRRVMPIMH--EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 GR H ++ G+ K +G I + + + Sbjct: 426 KSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHVALF 485 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DITE+K++EE + A++D++T L NR+ F+ E + +LLLID DRFK Sbjct: 486 TDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFK 545 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 +ND GH KGD +L AR + +C R+ D V R GG+EF+++L + + +A+ I Sbjct: 546 EVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMASIDRVAQDI 605 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNR 406 S+A+ + SIG++ + + + +D LFK D A+Y AK GRNR Sbjct: 606 LGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYAGRNR 659 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 19/191 (9%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + KE + ++ I T KA+ + Q + Sbjct: 85 WNAKLKENRIGFFIKNPTFDAE--GKLLFLVCITFDVTEDKKAAAALRLQSQ-------- 134 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG-RRVMPIMHEI 193 + N+ +++ + D I N +GY + KH IN G + M EI Sbjct: 135 IVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQMETAQEI 194 Query: 194 SH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKR-----L 245 + G ++ DG+T + A + L + DIT++K L Sbjct: 195 NRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRDITKRKLTEAVML 254 Query: 246 EEQLEHAAHHD 256 E++ ++ A D Sbjct: 255 EKESQYRAAID 265 Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 6/124 (4%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + +S P G+IV N A +G + + + ++ + Sbjct: 12 IVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQF-FPPEQIERFREKDRE 70 Query: 196 LPGGHKPLNFVHKLAD---GSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + G K + + + R P KL ++CI D+TE K+ L Sbjct: 71 VIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKKAAAALR 130 Query: 251 HAAH 254 + Sbjct: 131 LQSQ 134 >UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BSH2_9GAMM Length = 604 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 16/345 (4%) Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 E+ R+++ T+ C + ++++ +P F T +A + Sbjct: 261 NSATHEMEQFVRRKDGTSFWCHVKVKEIDPNDPAQGFIWSLEDVTEKRQAEENLRLA--- 317 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 A F T + +L+ D + I+ N A GY + + K ++ Sbjct: 318 ----ATVFETTTEAILVTD--ANNHIIIVNPAFTTITGYTFDEVVGKQPKILSSGHHDAE 371 Query: 188 PIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKR 244 S L G ++ +G I +++ + + DIT++K+ Sbjct: 372 FYQQMWTSLLQEGKWQGEIWNRRKNGEIYVEWISITTIRDANHQIVQYVAVFTDITKRKQ 431 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 EE + H AHHDA+T L NR F + + +++ ID DRFK +ND GH Sbjct: 432 NEELILHQAHHDALTNLPNRILFVDRLKQALLTAKRHQGRVAVMFIDLDRFKSVNDTLGH 491 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS 363 GD +L +A+ L +C R+ D V R GG+EF ++L + + +A+ + S+++ Sbjct: 492 DFGDLLLKEVAQRLIACIRESDTVARLGGDEFTVVLTQIQNISDIRIIAQRMLKSLSQPF 551 Query: 364 I--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I SIG+A + + L K+ D A+Y+AK +GRN Sbjct: 552 IQKDNEAFIGGSIGIAFFPKDGQEAETLVKKADIAMYQAKQEGRN 596 Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 13/190 (6%) Query: 71 IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 ++EI T QR E E + + R + + ++ E E +G +++ Sbjct: 137 VVEISTSQRYEIEWVMKDK-TRRLIDWSHTILTNEHHEVDYVIG--TGIDITERKRADET 193 Query: 131 YARFF-----LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 AR + +++P+ + + + + N GY + + + + Sbjct: 194 LARTLTELEIILDNSPVGIAFLGQKQRFIRINRKLEKMCGYTEQELRNHTPKILYFSPKG 253 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKR 244 + + + DG++ I+ + + + D+TE+++ Sbjct: 254 ----YKTFGNDNSATHEMEQFVRRKDGTSFWCHVKVKEIDPNDPAQGFIWSLEDVTEKRQ 309 Query: 245 LEEQLEHAAH 254 EE L AA Sbjct: 310 AEENLRLAAT 319 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 11/170 (6%) Query: 97 ETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDA 156 A + + + A K + + + N+A L+I R G IV Sbjct: 38 PVFEKSGTINRIAIVSRDITERKQAEDALKHERDFTNA-VINTAGSLVIVLDRWGHIVRF 96 Query: 157 NLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL---PGGHKPLNFVHKLADGS 213 N GY E + ++ W + ++ +L + + D + Sbjct: 97 NNTCSTLTGYTLEEVKNRYIWNFLLTDDKIESCKQYFKNLVVEISTSQRYEIEWVMKDKT 156 Query: 214 TRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 R + + ++ ++ DITE+KR +E L A +T L Sbjct: 157 RRLIDWSHTILTNEHHEVDYVIGTGIDITERKRADETL---ART--LTEL 201 >UniRef50_B1Y499 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y499_LEPCP Length = 438 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 99/421 (23%), Positives = 164/421 (38%), Gaps = 27/421 (6%) Query: 14 SPVWIVSP-FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 +PV +V + +++ N + L+ L+ + ++ + + + L L Sbjct: 18 APVGLVQASMDGEIVMINPISAQLLMPLSRGGDLSNLFA--ALEGVAPQLRALTASFAAS 75 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR-KKQGFY 131 + R + + ++ + A LG + + ++ + Sbjct: 76 HGMVCDGLRIPITAGARGLSDAQMLSISLLKLDETRLMAVLGDITQQVRRERLLRQNEAW 135 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP--I 189 T L+ G I D N + G+ E + + + I P + Sbjct: 136 LNAIFTGVTDYALVSLDARGCIDDWNPSIGRVTGFAREAVLGR-PYSIFYPEDATTPERL 194 Query: 190 MHEISHLPGGHKPLNF-VHKLADGSTRHVQTYAGPIE---------------IYGDKLML 233 + + L+ ADGS P+ + Sbjct: 195 LDRLREADANGWSLDDGWRLRADGSRFWGSALIAPLREREEPHVPASAGRPGDTDEPAYC 254 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 ++ DI++++ EQ A D +TG+ NRR F+ E M+ + S++L D D Sbjct: 255 LVLRDISDKREACEQQRQANDCDHLTGIANRRSFFEAAELELMRARQSPRPLSMILFDAD 314 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK IND +GH GD VL LA L + R+ D+V R GGEEF +LLP T L A+ +A Sbjct: 315 HFKLINDRHGHHAGDAVLRHLAALLTANFRQVDVVARVGGEEFAVLLPSTGLHGAVRVAN 374 Query: 354 TIRVSVAKVSISGLP---RFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLA 409 +R +V ++ TVS GVA S +D L K D ALY AK GRNR+ + Sbjct: 375 RLRQAVEAQTVEVDGVEIHCTVSGGVATMAAGLSGLDALMKCADQALYAAKAAGRNRIES 434 Query: 410 A 410 A Sbjct: 435 A 435 >UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2Q6_9PROT Length = 564 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 11/283 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + S ++ + IVD N A GY + + K+ + G+ + ++ Sbjct: 276 IYQSNADAIVVTDENNLIVDVNPAFTRITGYTLDEVRGKNPR-LMQSGQHDIQFYRKMWR 334 Query: 196 --LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 + GH K DG + + + DITE+K+ +E + Sbjct: 335 AIIDQGHWQGEIWDKRRDGGLYAKSVNIIALRHQDGSIYRFVAQFSDITEKKQKDELIHW 394 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A++D +T L NRR F +L ID D FK IND GH+ GD +L Sbjct: 395 QANYDPLTNLPNRRLFQDRLNQAIKLAHRTELPLALFFIDLDYFKEINDTLGHANGDVLL 454 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSI----SG 366 +AR + SC R+ D V R GG+EF ++LP + L +A+ I +++ Sbjct: 455 MEVARRISSCVREADTVARLGGDEFTVILPELSDATQILRVAKNIVDKLSQPFFFVNDET 514 Query: 367 LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVL 408 + SIG+A++ + L K D A+Y AK++GRNR + Sbjct: 515 GYHVSASIGIANYPQDAMDTKGLIKCADKAMYAAKSEGRNRFV 557 >UniRef50_A4JR79 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=Burkholderia RepID=A4JR79_BURVG Length = 432 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 136/325 (41%), Gaps = 25/325 (7%) Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + G + + + +RF + +SA ++ + I N AA N + Sbjct: 113 AVHEVLVTGFDTASETRLTHELEVSASRFRAVVDSAYDAIVTINEQHNITFFNRAAENLF 172 Query: 165 GYNHETMCQK-------------HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD 211 GY + + H+ + V + I+ P + + + D Sbjct: 173 GYKSAEVLGQRIEVLMPEKFRANHSRNVGRFADSVQMSLRSIT-PPRMDESNSVYGRHRD 231 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 G+ V+ IE+ G +V DI E+ L L+ A DA+TGL NRR+F + Sbjct: 232 GTVIPVEIAISKIEVNGVIEFTAVVRDIRERAELIALLKKQAVTDALTGLANRREFLNFV 291 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 E L S+ ++D D FK IND YGH GDEVL LA+ S + L RW Sbjct: 292 EK----VLGTDDLLSVFILDIDYFKKINDGYGHDIGDEVLRVLAKVGMSIPHESGLFARW 347 Query: 332 GGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRF-----TVSIGVAHHEGNE-SI 385 GGEEFV LP +AET+R + R TVSIGV E E + Sbjct: 348 GGEEFVAALPGADAADVRRIAETLRRRFEEQDFEHAWRVKPIQFTVSIGVVTREAGERDV 407 Query: 386 DELFKRVDDALYRAKNDGRNRVLAA 410 D L +R D ALY AK GRNR+ Sbjct: 408 DALMRRADRALYAAKESGRNRIEVG 432 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 100/420 (23%), Positives = 161/420 (38%), Gaps = 42/420 (10%) Query: 32 AAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALS---- 87 AK L + + + G S S +++ + ++L + + + + EE L Sbjct: 296 EAKELKRLMQPDLVELGLQSSSRWQQIAQTYAELGMLPEKYSVSGLIFEAEERKLPVWFG 355 Query: 88 ---CRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL 144 + L L + F + T + + R R +S ++ Sbjct: 356 YALAGIALLILVVAGAAVYFARLNRRLTREMISRRVFERALSHSEERYRQLAEHSKDVIW 415 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR---VMPIMHEISHLPGGHK 201 + + + G+ + + + E V + ++ L G Sbjct: 416 TVDLATMRFSYVSPSVEAVRGFTPDEVINQTLAEAMTPASYAAVVATLEEHLARLAAGDL 475 Query: 202 PL-----NFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLE---- 250 +G + + K +L I DI+E++R E +L Sbjct: 476 SAQSAMTEIEQPHKNGGVISSEVVGSFLLDQQGKPFALLGIARDISERRRSEAELRSAND 535 Query: 251 -----------------HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 A D++TG NRR E + SLL++D D Sbjct: 536 KLRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLD 595 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK IND YGH GD+ L LA TL + R D++ R+GGEEFV+L+PR PL A AE Sbjct: 596 HFKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAE 655 Query: 354 TIRVSVAKVSIS---GLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRVLA 409 R +A++ ++ FT S GVA + + DEL + D ALY AKN+GRNRV+ Sbjct: 656 LWRSKIAEIRVTFGNFELSFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNRVVV 715 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 90/401 (22%), Positives = 164/401 (40%), Gaps = 25/401 (6%) Query: 12 LTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 L+ W + + I+ + ++ + +S++EL K NQ + Sbjct: 582 LSDNKWTYMAPQVERIFGYKPEDWIDNQFWLDRVHEADWGKASREELSKL-----NQQEA 636 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 I K++ + + R ++R ++ E + G+ T + ++ + Sbjct: 637 HSIEYRFYKKDGSIVWVRDIIRIESDAENKLCLHGLLIDIT---------DSKQSESQLK 687 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 +P+ ++ +G+I N GY E + ++ I G + + Sbjct: 688 KLSRAIEQSPVSVVITDPEGRIEYVNPKFTQLTGYTLEEVIAQNPR-ILKSGNLLPSVYD 746 Query: 192 EISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEE 247 + G +K DGS P+ K++ + + DIT++K E+ Sbjct: 747 SLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEK 806 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +LE+ A HD +TGL NR Y E Q + +++L+D DRFK IND GH G Sbjct: 807 RLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVG 866 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISG 366 D+VL A+ + L+ R D V R GG+EFV+LL A +A + + + Sbjct: 867 DQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLH 926 Query: 367 --LPRFTVSIGVAHHEGNESIDE--LFKRVDDALYRAKNDG 403 + S G+ +++D L + D A+Y+AK +G Sbjct: 927 GRELYVSASFGI-CLSETDNVDGTILLRNADIAMYKAKAEG 966 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 9/144 (6%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE----T 170 L+ + + + Y + AP + +RDG+++ AN A N Y+ Sbjct: 420 LERKLTEESLQVSEQKYRHI--VDHAPFGITRTTRDGKLISANPAMANILKYDSSQELLE 477 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGD 229 + + + + + L N + DGS + ++ + G Sbjct: 478 TIGRSSLQEVIFSNPADREDMVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRLSEKGS 537 Query: 230 K--LMLCIVHDITEQKRLEEQLEH 251 + + DITEQ ++ L+ Sbjct: 538 QNWEYENFLEDITEQLETQQTLQK 561 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 32/206 (15%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG-QIVDANLAALNFYGYNHET 170 L R N + + A + NS +L + DG IV + F GY E Sbjct: 122 VLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSKNISQF-GYAQEE 180 Query: 171 MCQKHTWEINMLGRRVMPIMHE--ISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEI 226 + ++ + + + E + + G + +++ R V Sbjct: 181 LMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEVRWVDERTFVERD 240 Query: 227 YGDKL--MLCIVHDITEQKRLE------EQLEHAAHHDAMTGLL------------NRRQ 266 K+ + DI E+KR E +L A ++ + LL +R Sbjct: 241 AAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQLLEATLDEAEALTESRMG 300 Query: 267 FYHITEPGQMQ------HLAIAQDYS 286 FYH E Q D+ Sbjct: 301 FYHFLEDDQKTLSLQAWSRRTKSDFC 326 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 65/163 (39%), Positives = 94/163 (57%) Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 ++E+ + A D +TG+ N+ +F H+ + + + SL++ D D FK IND +GH Sbjct: 334 IKERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGH 393 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD VL LA+ + S R D RWGGEEFV+L P T L+ A LAE IR ++ + Sbjct: 394 QAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPF 453 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + + T S GV N+++D KR D ALY+AK+ GRNRV Sbjct: 454 ETVGKVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNRV 496 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 46/412 (11%) Query: 19 VSPFEEQLIYANSAA---------KLLMQD--LTFSQLRTGPYSVSSQKELPKYLSD--- 64 ++ + ++IY N A +LL QD + P ++ KE + + Sbjct: 208 ITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLERIKEWKGLIRESVN 267 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 ++ + + E + + + + I + ++ Sbjct: 268 IRKDGTTFLVWLM----SEIVKNAKGEPFAIVTSCEDI------------TERKQAEEAL 311 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 RK + Y SAP ++ +G++ N A +G+ + ++ + + Sbjct: 312 RKSEERYRIVLE--SAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVENV 369 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV--HDITEQ 242 ++ E + + DG V DKL I+ DITE+ Sbjct: 370 PENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITER 429 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI--------AQDYSLLLIDTDR 294 K+ EE+++ A+HD +TGLLNR+ FY E ++ + ++L +D DR Sbjct: 430 KKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDR 489 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAE 353 FK++ND GH GDE+L +A L++C RK D +FR GG+EF ++L T +A+ Sbjct: 490 FKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQ 549 Query: 354 TIRVSVAKVS--ISGLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKND 402 IR ++A+ TVSIG++ + + + ++ L K D A+Y AK + Sbjct: 550 KIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEE 601 Score = 72.2 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 5/131 (3%) Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +++ + + + + + D +I+ N A +GY E + + Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDIT 240 R + I G + V+ DG+T V + ++ + ++ DIT Sbjct: 245 EHRKPLTLERIKEWKGLIR--ESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDIT 302 Query: 241 EQKRLEEQLEH 251 E+K+ EE L Sbjct: 303 ERKQAEEALRK 313 >UniRef50_Q55955 Sll0779 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55955_SYNY3 Length = 884 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 21/306 (6%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R + + + + F T + LI S DG+ ++ N A GY + + E Sbjct: 563 RIQEALAESEERFRQTFQTTAVSSALI--SLDGKFLEVNPAFCELLGYTSDELQDHDVAE 620 Query: 179 I--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLC 234 + + ++ + ++ DG + + +C Sbjct: 621 VTDPNWVPFQGDLTQQLLNREIMAYTQERRYQHRDGRWIWGLLNVSLVRDAQQQPLYYVC 680 Query: 235 IVHDITEQKRLEE-------QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 + +I K+ +E +LE D +TG+ NRR F E + +L Sbjct: 681 QIQNIDPLKQAQEKLQEVNIELERLTQIDGLTGVYNRRFFDQALEREWQIAFRETESLTL 740 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLD 346 +++D D FK ND GH GD L +A L+ R DLV R+GGEEF L+LPRT L Sbjct: 741 VMLDIDYFKLYNDTLGHQAGDHCLRIVAAILQESVHRTSDLVARYGGEEFALILPRTDLS 800 Query: 347 TALSLAETIR-----VSVAKVSISGLPRFTVSIGV--AHHEGNESIDELFKRVDDALYRA 399 A+ +A+ I+ +++ + TVSIG+ A S+ K DDALY+A Sbjct: 801 GAVIVAQRIKTLMDAKAISHPTSEIANYVTVSIGIHCAVPRPGLSLASWVKCADDALYQA 860 Query: 400 KNDGRN 405 K GRN Sbjct: 861 KKRGRN 866 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 15/167 (8%) Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 + E + G+ T +++ F S L+ P+ G+ Sbjct: 411 VEYNEAGQPVRMSGLNINIT---PLKEVQLALAEREAMMQALFDQASQFTALLTPT--GK 465 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEI------NMLGRRVMPIMHEISHLPGGHKPLNFV 206 +V N AL+F G + + + WE L + +H+ + G + Sbjct: 466 VVKVNQRALDFAGITVDEIVDQDFWETPWWQASEQLKADLKSAIHQAAQ--GILIRYDVE 523 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEH 251 + +G + PI +++ LC DIT++ R++E L Sbjct: 524 NLGNNGQKVILDFSIRPIYDTDQRIIFLLCEGRDITDKFRIQEALAE 570 >UniRef50_C7RS23 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=2 Tax=Betaproteobacteria RepID=C7RS23_9PROT Length = 439 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 133/313 (42%), Gaps = 9/313 (2%) Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 + +G LG + QR + NSA ++ + I AN A Sbjct: 114 LVKGQFEHDALGRAIRHALVRQRLESRLRLFEAALNSAANGIVITDVNAAIEWANPAFTA 173 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTY 220 G + E+ GR+ + L G V++ DGS Sbjct: 174 MTGRTLAEAVGRTPGEVLKSGRQDAAFYQRMWATILAGQVWSGELVNRRKDGSVYDEALT 233 Query: 221 AGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 P+ ++ + I DI+E+K EE+++H AHHD +T L NR Q Sbjct: 234 ISPVTDMNGRIQHFVAIKQDISERKVTEERVQHLAHHDQLTDLPNRALLSDRLAQAVAQA 293 Query: 279 LAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFV 337 +L+ +D D+FK +ND GH GD +L +A L+SC R+ D V R GG+EFV Sbjct: 294 RRDRGTLALMFLDLDQFKPVNDTLGHDVGDLLLKEVALRLQSCVPRESDTVSRLGGDEFV 353 Query: 338 LLLPRTP-LDTALSLAETIRVSVAKVSISGLPR--FTVSIGVAHH-EGNESIDELFKRVD 393 +LL + A+ +A I ++ + G + S+G+A + + E ++ L K D Sbjct: 354 ILLAQMDKAADAVVVAGKILAALQRPFAIGPHEIGISASLGIAVYPQHGEDVNRLLKNAD 413 Query: 394 DALYRAKNDGRNR 406 A+Y AK GRN Sbjct: 414 TAMYHAKKAGRNC 426 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 104/388 (26%), Positives = 156/388 (40%), Gaps = 15/388 (3%) Query: 32 AAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLV 91 A ++ QD G ++ P Y +++ ++ +V R+ + S L Sbjct: 760 AEEIFSQD---GLPLKGRSMQWIHRDTPAYEEFVRSDEEVRRSGSVYREYQLRVASGALR 816 Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 L T TL R + + P ++ G Sbjct: 817 WFSLRGTLLDPDQPAGNLIWTLMDTTERRQAEEALSSARAHLLEIIQHFPGGVLVQDAAG 876 Query: 152 QIVDANLAALNFYGYNHETM----CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH 207 V N A + + C + E M P+ + + Sbjct: 877 SAVVVNQAMCDVFRLPSRAADVIGCSREALESLMPPEA-RPLQPSRNPSHNDAVAAEYEI 935 Query: 208 KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 L D T +Q + L I D+TE++R E+ LE A DA+TGL NRR F Sbjct: 936 VLNDARTVRIQYIPIRKPQGEHQGRLWIAKDVTERRRHEQTLERLATTDALTGLANRRAF 995 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLES-CARKGD 326 E +M+ + L+++D D FK +ND +GH+ GDEVL LAR L R D Sbjct: 996 MARLEEERMRPSMGGRGGMLIMLDLDHFKRVNDTWGHAAGDEVLVHLARLLRGDLLRATD 1055 Query: 327 LVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI----SGLPRFTVSIGVAHHEGN 382 L R GGEEF +LLP T + AL +AE +R ++ + I + T+S+GVA G+ Sbjct: 1056 LAGRLGGEEFAVLLPDTTAEEALGVAERLRRALEQSKIHVGDGATLQVTMSLGVAPITGD 1115 Query: 383 ESIDELFKRVDDALYRAKNDGRNRVLAA 410 + D ALY AKN GRN+V+ A Sbjct: 1116 --ALAVLAHADIALYEAKNTGRNKVVLA 1141 >UniRef50_B1WPX1 Two-component response regulator n=5 Tax=Chroococcales RepID=B1WPX1_CYAA5 Length = 483 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 34/310 (10%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 Y TN++ ++ + D I+ N GY+ E + K+ + R P Sbjct: 166 LYEAIAATNNSIVITDATASDYPIIYVNPGFETMTGYSLEEVTGKNCRFLQE-SDRQQPQ 224 Query: 190 MHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKR- 244 + EI H +P + + DGS + PI+ K++ L + D+T++KR Sbjct: 225 LEEIRHCLQQGQPCHVTLRNYRKDGSLFWNEMSLSPIKDESGKIIYYLAVQTDVTDKKRA 284 Query: 245 --------------------LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQD 284 L +L A+ D +T + NRR F E + + Sbjct: 285 NKEQQRYEASLQKMNRELHELNRKLYRLANMDGLTEVANRRCFDETLEQEWRRLSREKKP 344 Query: 285 YSLLLIDTDRFKHINDLYGHSKGDEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRT 343 SL+L D D FK ND YGH GD+ L +A T+ ++ R DLV R+GGEEF ++LP T Sbjct: 345 LSLILGDIDYFKRYNDNYGHLGGDDCLKKVAATIAKAALRPADLVARYGGEEFAVILPDT 404 Query: 344 PLDTALSLAETIRVSVAKVSISG-----LPRFTVSIGVAHHEGN-ESIDELF-KRVDDAL 396 P + A +A+ I S+ ++ I P T+S+GV + E+ F +VD+AL Sbjct: 405 PYEGAKQVAQRILESLRRLRIPHQVSDVQPYVTMSLGVGTINPSLETKATCFVDQVDEAL 464 Query: 397 YRAKNDGRNR 406 + AK GR+R Sbjct: 465 FEAKKQGRDR 474 >UniRef50_A6FEG5 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=A6FEG5_9GAMM Length = 620 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 157/387 (40%), Gaps = 28/387 (7%) Query: 50 YSVSSQKELPKY-LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIE 108 YS S +++ Y S L + E + + + L + I+ + Sbjct: 215 YSASKLEQIKSYEKSVLTGEIQEYEEWSTVDDNNILLQTIKYPLYDEHQKVVAILTVSND 274 Query: 109 APATLGLK---ASRSANYQRKKQGFYARFFLTNSA----PMLLIDPSRDGQIVDANLAAL 161 + L S + + R + L NS P + + +G+ V AN Sbjct: 275 QTEVMELNERLLSENGEHLRIEAELSRNNSLLNSVINATPDPVAFMNGNGKYVGANHGYC 334 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQT 219 G H + + ++ + E L G + F+H +D R + Sbjct: 335 EVVGVKHADLIGMDRQHLFSHDKKSWLLEQENQLLVDGKSVRYEEFLH-FSDQEPRWYEI 393 Query: 220 YAGPIEIY--GDKLMLCIVHDITEQKRLEEQLEH-------AAHHDAMTGLLNRRQFYHI 270 G+ +L I D+TE+KR+E +LE + D +T + NRR F Sbjct: 394 CKQRYVNSTNGESGILIIYRDLTERKRIEHELEQAIEKFDELSSIDELTKIANRRTFDSK 453 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-RKGDLVF 329 + H ++ SLL D D FK ND YGH GD VL +A+ ++ R DLV Sbjct: 454 LQHYWSTHHREVKEMSLLFCDVDSFKLYNDNYGHPMGDTVLANIAQVMDEQVHRGADLVA 513 Query: 330 RWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLP-----RFTVSIGVAHHEGNE- 383 R+GGEEF ++LP T + A+ LA I +V ++I T+SIGVA + Sbjct: 514 RYGGEEFAVILPNTDEEGAIRLAIKIIAAVENLAIEHTHSKAAKHVTLSIGVATMCPEDE 573 Query: 384 -SIDELFKRVDDALYRAKNDGRNRVLA 409 S +L + D ALY AK +GRN+ Sbjct: 574 SSEAQLLENADKALYLAKENGRNQYCV 600 >UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R258_9PLAN Length = 779 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 18/289 (6%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM---------CQKHTWEINMLGRRV 186 L S +I + QIV N AA G ++ + ++ Sbjct: 291 LLESMHDAVIFVDNNLQIVHWNRAAERLTGIAASSIEHKKWSPSLVSLRDEKERLIDDPE 350 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKR 244 P++ I + + L+ + +G + + P+ ++HD + + Sbjct: 351 CPVIQAIKNGVQTVRRLSVTGR--NGQRVDIDAHLVPVHGKNGLMHGAAVLLHDASSRIT 408 Query: 245 LEEQ---LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 LE++ L A D +T + NR +F I H +SL++ D D FK IND Sbjct: 409 LEQRVQTLHEKATRDPLTQVANRAEFDEIHATYVQSHRDRRLPFSLIICDIDYFKRINDN 468 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 +GH GDEVL + A L R GDLV R+GGEEFVLL A AE +R +A+ Sbjct: 469 FGHQAGDEVLQSFAALLRRHTRPGDLVARYGGEEFVLLCIDCDNTAATRRAEELRRELAE 528 Query: 362 VSISGLPR--FTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 ++ L T S GV + ++ + + +R D ALY+AK GRN V+ Sbjct: 529 FPMAALGNKSITASFGVTELQNGDTPETMLRRADRALYQAKESGRNTVI 577 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 8/312 (2%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 + F+ P + +R +P ++ DG+I N Sbjct: 366 KLEFDNDGLPVKMVGTVQDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMF 425 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQ 218 + GY+ + + ++ I G+ E+ G +++ D S Sbjct: 426 IKVTGYSRDEVLGQNPR-ILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIES 484 Query: 219 TYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM 276 P++ K+ + I DITE+K+ E E+ A+ D +TGL NRR + Sbjct: 485 ATITPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLN 544 Query: 277 QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 + Q +++ +D D FK+IND GH+ GD+VL +A+ ++ R+ D V R GG+EF Sbjct: 545 MAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEF 604 Query: 337 VLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTV--SIGVAHHE-GNESIDELFKRVD 393 ++L P T + A+ +A T+ ++K S+ T+ SIG+A + L K + Sbjct: 605 IMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAE 664 Query: 394 DALYRAKNDGRN 405 A+YR KND RN Sbjct: 665 TAMYRVKNDSRN 676 >UniRef50_C4L7R2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7R2_TOLAT Length = 658 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 8/295 (2%) Query: 115 LKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 L+ + +RK + + +++P ++ D +I+ N A GY E + Sbjct: 346 LQVRTALTERRKNEAAMQLASTVLDASPGGIMVTDADKRIIAVNPAFTRITGYALEDILH 405 Query: 174 KHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM 232 ++ ++ + M S G+ +++ DG + +M Sbjct: 406 QNPRILSSGQQDEMFYQTMWQSIEQHGYWEGELINRRKDGQLLPELLSISKVFDKEGNVM 465 Query: 233 --LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 + + DI+ ++ E ++++ AHHD +T L NR + ++ I Sbjct: 466 NYVGMFLDISARREAEARIQYLAHHDYLTNLPNRLLLVEHATQALTLARRYKRRMAIFYI 525 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTAL 349 D DRFK IND YGH+ GD +L +A+ L S R+ D V R GG+EFV+LLP D+ Sbjct: 526 DLDRFKPINDQYGHNVGDVILKTVAQRLLSIVRESDTVCRQGGDEFVILLPEFMDTDSLE 585 Query: 350 SLAETIRVSVAKVSISGLPRFTV--SIGVAHHEG-NESIDELFKRVDDALYRAKN 401 LA +R + K S++ + T+ SIG+A + +++D + + D A+Y AK Sbjct: 586 ILAIKLRDEIQKPSMANGYQLTISASIGIATYPDNGDTVDAIIQSADTAMYSAKA 640 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 25/396 (6%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 I+S L+ N + L + + + + + + + E+ + Sbjct: 444 IISTSTNGLVVVNRKGRAL----FINPAAEALFGRPASQLEGELIGIPLVTKESTELEIL 499 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 ++ + + R+V E + ++++ + Sbjct: 500 RQDGQLKIVRMRVVEI------------SWEQETAYLASLTDVTDFKKTEDQLKMFSRAC 547 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-- 195 + +P+ ++ +G I N GY + ++ I G P + Sbjct: 548 DQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPR-ILKSGYTTEPEYDVLWRQI 606 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G F +K +G P+ + + DIT+QK EE L H A Sbjct: 607 TSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQA 666 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+T L NR + + + +++ ID D FK+IND GH GD +L Sbjct: 667 NYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKE 726 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISGLPRF 370 L C RK D V R GG+EF+L++P+ L A +A + + + Sbjct: 727 AGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFI 786 Query: 371 TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 + SIG+A + + +++ L + D A+Y AK +GRN Sbjct: 787 SASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRN 822 >UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV29_DESOH Length = 458 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 171/415 (41%), Gaps = 27/415 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE----LPKY 61 +++ ++ E ++ Y N AA+ ++ + L +S+ + + Sbjct: 46 MRAINVSARDAVLMMDAEGRVSYWNPAAERILGYTSDEALGRNLHSLLAPQHYRRLFEAA 105 Query: 62 LSDLQ------NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 + Q N + + +++ +E + L +L + + GI + Sbjct: 106 FPEFQRSGCGNNVEKTMRLKALRKNGDEFPVELSLAGVQLHDGWHAV---GIIRDISNRE 162 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + ++ R+ + + + AP+ + G+ ++AN AA GY E + + Sbjct: 163 LSDKAL---RESEDKFRTYMEK--APLGIFVADHTGRCLEANQAACRMSGYTEEELLELS 217 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI 235 + + + G + + + +G + A I G +L Sbjct: 218 LQDFLAPDFSGVGMASFKKLKTEGRVDGDLMVRGKNGKNFWINLVATTI---GPDRVLAY 274 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT +K+ EE+++ A+HDA+TGL NR+ F Q + + +++D D F Sbjct: 275 CQDITRRKQTEEEIQKMAYHDALTGLPNRKLFSDRLGIALAQARRDQKGIAAIILDLDNF 334 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K +ND +GH GD +L A A L + RK D V R GG+EFVL+LP + +A+ Sbjct: 335 KDVNDTFGHDVGDRLLQAAAERLSAALRKSDTVARLGGDEFVLILPDLKGTEDVDRVAQK 394 Query: 355 IRVSVAKVSISGLPR--FTVSIGVAHHEGNESIDE--LFKRVDDALYRAKNDGRN 405 I + T SIG+A + + I E L K D A+Y+ K GRN Sbjct: 395 IVDGFRNPFSIDTHQLIVTTSIGIAVY-PRDGISEVLLLKHADIAMYQVKQAGRN 448 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 146/376 (38%), Gaps = 17/376 (4%) Query: 38 QDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTE 97 D L + P + ++ D+ H + + ++ + L + L Sbjct: 195 GDTPIGHLASRPLLTVAANDMLIRARDMLMDHQ---VRHLAVLDDRGQVVGLLGFQDLLA 251 Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + + ++ RK R ++ +++ D +I N Sbjct: 252 GAEQSYLKDLRRALEQR---DKALAQSRKHLQLAERVIDSSLEGIVITDAHA--RIEFVN 306 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTR 215 A + GY+ E + + ++ GR E+ G+ ++ G+ Sbjct: 307 PAFTHLTGYSLEEVAGRTPAVLSS-GRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALY 365 Query: 216 HVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP 273 I + DIT + E Q+ A++D +T L NRR Sbjct: 366 LELLTITAITNDDGDTTHYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSL 425 Query: 274 GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGG 333 Q +++ ID D FK +ND GH+ GDE+L ++ L R+ D + R GG Sbjct: 426 AIKHAHRHRQRLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGG 485 Query: 334 EEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP--RFTVSIGVAHH-EGNESIDELF 389 +EF+ LLP +D A+ + + + ++++ G R SIG++ + + ES D L Sbjct: 486 DEFLALLPDLQEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALI 545 Query: 390 KRVDDALYRAKNDGRN 405 + D A+YR+K +GRN Sbjct: 546 RNADGAMYRSKTEGRN 561 >UniRef50_B5JS67 Gaf/pas/ggdef domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JS67_9GAMM Length = 488 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 84/335 (25%), Positives = 132/335 (39%), Gaps = 32/335 (9%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 + L + +++ + + + F + M L+ S +G+ + N A Sbjct: 152 ALALGRTIERDQLERQRNQALHELKNSVEQFEGAFEAAAIGMALV--SLEGRWLRVNPAL 209 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQ 218 + GY+ + + + + + L G + DG T + Sbjct: 210 RHMLGYSEKALLETDFQTLTHPDDLYSDLQQVQKLLNGEETHYTIDKRYFHRDGHTVWGR 269 Query: 219 TYAGPIEIYGD---KLMLCIVHDITEQKRLEEQLEH--------------AAHHDAMTGL 261 I + + V DIT+Q + LE A+ D +T L Sbjct: 270 LSVALIRTPDQGSPQHFVSQVQDITQQVESSKALEQRQIELEEKNIELATLANTDPLTQL 329 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 RR F Q + +L+D D FK ND YGH GDE L + L+ Sbjct: 330 ATRRYFMERLSTAIAYCQRQQQPLAYVLLDVDHFKSFNDQYGHLAGDEALKRVGSILKHS 389 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEG 381 R+ DL R+GGEEF L LP T AL +AE +R ++ ++S P T S+GVA + Sbjct: 390 PREYDLASRYGGEEFALYLPSTTAQEALQVAERLRTAIEEISDLDRP-ITASLGVALLDP 448 Query: 382 NES----------IDELFKRVDDALYRAKNDGRNR 406 + I+ L +R D ALY+AK+ GRNR Sbjct: 449 ASALPPDSDMKTVIEALIQRADTALYQAKSQGRNR 483 >UniRef50_A3QDK0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Shewanella loihica PV-4 RepID=A3QDK0_SHELP Length = 496 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 12/278 (4%) Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG- 198 AP + + G I+ AN + +G++ + + + ++ + + Sbjct: 222 APNAIFSVNEHGTIISANRETMRLFGFSERALNKINVDDLVPSATKEKHKKLRLEFQKSD 281 Query: 199 -----GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 + F K +G + +K + ++ D+++ E Q + A Sbjct: 282 RVQPMSQRNTIFYGKKLNGDVFPASISIATYGVGDEKHSIVVIKDLSD----EMQYKSQA 337 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 + D +T + NRR + ++ + D D FK +ND +GH GD+VL Sbjct: 338 NTDPLTKVANRRAINRQLAAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHLVGDDVLQR 397 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS--ISGLPRFT 371 +A+ RK D V RWGGEEFV++L T + A A+ +R V + S I T Sbjct: 398 VAKIFSDAIRKTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQGIDFPVAIT 457 Query: 372 VSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +S GV+ + ++ D LF D ALYRAK GR+ V+ Sbjct: 458 LSAGVSVYCQDDKQDCLFNHADQALYRAKESGRDCVVV 495 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 12/313 (3%) Query: 104 FEGIEAPATLGLKASR--SANYQRKKQGFYARFF--LTNSAPMLLIDPSRDGQIVDANLA 159 F+ E+ L A+ + +RK+ + R + +I +G I AN Sbjct: 276 FQPSESDLQLLETATHFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTT 335 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHV 217 GY + K ++ G+ ++ G F+++ +G R Sbjct: 336 FSTNTGYALHDIIGKKP-NMHKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERID 394 Query: 218 QTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 P+ ++ L I DIT QK + ++E AH D +TGL NR + Sbjct: 395 LVRVSPVREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRAL 454 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 +++ +D D FK+IND GH+ GD +L LA+ L + R+ D + R GG+E Sbjct: 455 RLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDE 514 Query: 336 FVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTV--SIGVAHHE-GNESIDELFKRV 392 FVLLLP ++A +A+ + ++ + G V SIG+A + + L K Sbjct: 515 FVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNA 574 Query: 393 DDALYRAKNDGRN 405 D A+YRAK +GRN Sbjct: 575 DVAMYRAKQEGRN 587 >UniRef50_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD7_METSD Length = 640 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 100/381 (26%), Positives = 165/381 (43%), Gaps = 26/381 (6%) Query: 43 SQLRTGPYSVSSQ----KELPKYLSDLQNQHD-IIEILTVQRKEEETALSCRLVLRKLTE 97 +LR SV+ Q EL ++S +++ HD + + + E +L + Sbjct: 266 GELRWASLSVTKQINLRGELEYFVSIVKDIHDRKVAEQALNELQHELENRVAQRTFELNK 325 Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + ++ F A ++ Q K+ + +A + ++ G I N Sbjct: 326 SNEMLSFA----------MAKQTLAAQELKERELEISMVIENANDAYVSINQSGIITAWN 375 Query: 158 LAALNFYGYN-HETMCQKHTWEINMLGRRVMPIMHEISHLPGGH-----KPLNFVHKLAD 211 A +G++ E + Q+ I + + H+ G K L K D Sbjct: 376 RQAEITFGWSAREAIGQRLDQVIIPPHMQQAHLNGMQRHMDTGEAVVLGKRLELEAKHKD 435 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 G V+ IE++G + + DI+E+K L+ LE A HD +TGL NRR F Sbjct: 436 GHIVPVEVRISKIEVHGKHIFSAFLTDISERKHLQSLLEKEAKHDVLTGLPNRRAFTEAL 495 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 + Q +L+ ID D FK IND GH GD +L +A L S R+ D V R+ Sbjct: 496 PLALARADRTQQWMALMFIDLDGFKQINDELGHDAGDMLLREIANRLNSATRQTDTVARF 555 Query: 332 GGEEFVLLLPRTPLDT-ALSLAETIRVSVAKVSISGLP--RFTVSIGVAHHEGNESI--D 386 G+EFV+LL P A +A+ I + + G + + S+G+A++ N + D Sbjct: 556 AGDEFVVLLENMPEKQHAEGVAQKILTLLRDPVMLGGEPRQISCSLGLAYYAPNSHVQPD 615 Query: 387 ELFKRVDDALYRAKNDGRNRV 407 L K D+A+Y AK G+N++ Sbjct: 616 MLLKEADNAMYEAKRSGKNQI 636 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 14/187 (7%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 EA A S + + F + + L+ P DG + N F GY Sbjct: 161 REALALTESHLKLSQTVLHASEARFRTIFEKAAIGIALVAP--DGGWLSVNEELCRFLGY 218 Query: 167 NHETMCQKHTWEI--NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGP- 223 + + +I + ++ +++ + + DG R Sbjct: 219 RQDELHLLSFRDITYPDDLPADLDLLKQLAEDKIDRYKIEKRYIRKDGELRWASLSVTKQ 278 Query: 224 IEIYGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNR---RQFYHITEPGQMQHL 279 I + G+ + + IV DI ++K E+ L H L NR R F + Sbjct: 279 INLRGELEYFVSIVKDIHDRKVAEQALNELQH-----ELENRVAQRTFELNKSNEMLSFA 333 Query: 280 AIAQDYS 286 Q + Sbjct: 334 MAKQTLA 340 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 456 e-127 UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobact... 455 e-126 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 402 e-110 UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 T... 399 e-110 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 393 e-108 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 385 e-105 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 384 e-105 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 383 e-105 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 383 e-105 UniRef50_C6P0P9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 381 e-104 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 378 e-103 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 378 e-103 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 377 e-103 UniRef50_A0L7S5 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 375 e-102 UniRef50_C5V5L2 Response regulator receiver modulated diguanylat... 375 e-102 UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 374 e-102 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_C5V180 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 374 e-102 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 374 e-102 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 373 e-102 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 373 e-102 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 373 e-102 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 369 e-100 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 368 e-100 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 367 e-100 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_Q0EX85 Putative uncharacterized protein n=1 Tax=Maripro... 366 e-100 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 366 e-100 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 365 2e-99 UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 364 3e-99 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 364 3e-99 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 364 4e-99 UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteri... 364 4e-99 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 363 5e-99 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 363 6e-99 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 363 6e-99 UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 362 9e-99 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 362 1e-98 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 362 1e-98 UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 362 2e-98 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 362 2e-98 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 362 2e-98 UniRef50_UPI0001698C53 response regulator receiver modulated dig... 362 2e-98 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 361 2e-98 UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 361 3e-98 UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 361 3e-98 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 360 4e-98 UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 360 5e-98 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 360 6e-98 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 359 8e-98 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 359 1e-97 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 359 1e-97 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 358 2e-97 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 358 2e-97 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 358 2e-97 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 358 2e-97 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 358 2e-97 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 357 4e-97 UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 357 4e-97 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 357 5e-97 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 356 8e-97 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 356 8e-97 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 1e-96 UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 355 1e-96 UniRef50_C6P417 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 355 2e-96 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 2e-96 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 2e-96 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 355 2e-96 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 354 2e-96 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 354 2e-96 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 354 3e-96 UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 T... 354 3e-96 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 354 4e-96 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 354 4e-96 UniRef50_C7RS23 Response regulator receiver modulated diguanylat... 354 5e-96 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 354 5e-96 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 353 6e-96 UniRef50_B9Z7T9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 353 7e-96 UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/P... 352 2e-95 UniRef50_Q47J00 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 352 2e-95 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 351 3e-95 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 351 3e-95 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 351 3e-95 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 351 3e-95 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 351 3e-95 UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 350 4e-95 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 5e-95 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 350 5e-95 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 6e-95 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 6e-95 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 8e-95 UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=... 349 1e-94 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 1e-94 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 1e-94 UniRef50_Q0F206 Hypothetical 918 kDa protein Y4LL n=1 Tax=Maripr... 347 3e-94 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 6e-94 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 346 7e-94 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 346 9e-94 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 346 9e-94 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 345 1e-93 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 345 1e-93 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 345 2e-93 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 344 3e-93 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_B9Z1H0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 344 5e-93 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 5e-93 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 343 6e-93 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 343 7e-93 UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 343 8e-93 UniRef50_A4BMS6 Sensory box protein n=1 Tax=Nitrococcus mobilis ... 343 8e-93 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 1e-92 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 2e-92 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 342 2e-92 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 2e-92 UniRef50_C4L7R2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 342 2e-92 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 342 2e-92 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 341 2e-92 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 341 3e-92 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 341 3e-92 UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 340 4e-92 UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenz... 340 5e-92 UniRef50_B8GQW3 Signal transduction protein containing a membran... 340 6e-92 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 6e-92 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 340 7e-92 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 339 8e-92 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 9e-92 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 339 1e-91 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 339 1e-91 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 1e-91 UniRef50_Q2RU51 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 2e-91 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 2e-91 UniRef50_Q2W736 Response regulator containing a CheY-like receiv... 338 2e-91 UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 337 4e-91 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 4e-91 UniRef50_C5V4E8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 337 7e-91 UniRef50_C4KDN7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 336 9e-91 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 334 3e-90 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 3e-90 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 334 4e-90 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 4e-90 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 334 4e-90 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 334 4e-90 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 334 5e-90 UniRef50_A8FYM5 Signal transduction protein containing a membran... 334 5e-90 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 333 6e-90 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 333 6e-90 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 333 7e-90 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 333 7e-90 UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 333 8e-90 UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=... 333 9e-90 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 332 1e-89 UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors... 332 1e-89 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 332 2e-89 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 332 2e-89 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 330 4e-89 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 9e-89 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 329 1e-88 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 329 1e-88 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 1e-88 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 1e-88 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 329 1e-88 Sequences not found previously or not previously below threshold: UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 366 e-100 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 365 2e-99 UniRef50_P72843 Regulatory components of sensory transduction sy... 365 2e-99 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 363 6e-99 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 360 5e-98 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 358 2e-97 UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thioo... 358 2e-97 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 357 4e-97 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 357 5e-97 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 2e-96 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 354 5e-96 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 354 5e-96 UniRef50_C6WYT7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 353 8e-96 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 352 9e-96 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 351 2e-95 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 4e-95 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 4e-95 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 1e-94 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 2e-94 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 348 2e-94 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 348 2e-94 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 4e-94 UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 4e-94 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 6e-94 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 6e-94 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 346 1e-93 UniRef50_Q2W523 FOG: PAS/PAC domain n=5 Tax=Magnetospirillum Rep... 346 1e-93 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 345 1e-93 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 345 2e-93 UniRef50_A8FY98 Signal transduction protein containing a membran... 345 2e-93 UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylo... 345 2e-93 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 344 4e-93 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 344 4e-93 UniRef50_Q1JZ53 Diguanylate cyclase/phosphodiesterase with PAS/P... 343 6e-93 UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella ma... 342 1e-92 UniRef50_Q8D5N8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepI... 342 2e-92 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 2e-92 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 3e-92 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 340 6e-92 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 340 7e-92 UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 339 2e-91 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 338 2e-91 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 3e-91 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 3e-91 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 337 5e-91 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 337 5e-91 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 6e-91 UniRef50_C5V740 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 336 7e-91 UniRef50_A6FAG7 Sensory box/GGDEF domain protein n=1 Tax=Moritel... 336 7e-91 UniRef50_Q21Y95 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 336 9e-91 UniRef50_B6BHH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 336 1e-90 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 336 1e-90 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 335 1e-90 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 335 1e-90 UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors... 335 2e-90 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 335 2e-90 UniRef50_B3E7I1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 334 4e-90 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 334 4e-90 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 5e-90 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 334 5e-90 UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 7e-90 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 2e-89 UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 3e-89 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 331 3e-89 UniRef50_Q5NYX6 Putative uncharacterized protein n=1 Tax=Aromato... 331 4e-89 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 5e-89 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 6e-89 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 330 6e-89 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 330 6e-89 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 330 7e-89 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 1e-88 UniRef50_Q483T7 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 329 1e-88 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 221/414 (53%), Positives = 286/414 (69%), Gaps = 4/414 (0%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ + L++L++PVW+V P ++L++AN A+ + D +R G +S +Q++L Sbjct: 18 MLIAYLDALNILSTPVWVVMPKNQELLFANKEARKIAGDCQLPLMRNGRFSAHAQQQLDA 77 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR- 119 YL L I+EI T+Q LSCRL L ++ VI+FEG+ + + + Sbjct: 78 YLPALAGDDQIVEIWTIQSAGNIFPLSCRLSLTQIEPYGDVIVFEGLYIAENVLTQPNMG 137 Query: 120 ---SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 S Y+R +QGFY + F TN+APMLLIDP R+GQIVDAN AA FYGY+ + MC KHT Sbjct: 138 QLCSKPYRRDEQGFYEQLFNTNTAPMLLIDPLREGQIVDANQAATRFYGYSRDEMCMKHT 197 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV 236 WEIN +GR V+P+M+E++ LPGGHKPLNF+HKLADG+TRHVQTYAGP+E+ G +LMLCI+ Sbjct: 198 WEINTMGRDVLPVMNEVARLPGGHKPLNFIHKLADGNTRHVQTYAGPVELDGVRLMLCII 257 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 HDITEQKRLE+ LEHAA D +T L NRRQF+ + E Q +SL+L+D D FK Sbjct: 258 HDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHAHAQSQRYGHCFSLILLDVDHFK 317 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIR 356 IND GH+KGDEVL LARTLES R+ D VFRWGGEEF +LLP T L+ AL LAE+IR Sbjct: 318 SINDQLGHNKGDEVLILLARTLESIIRESDSVFRWGGEEFTILLPLTHLEGALQLAESIR 377 Query: 357 VSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ + LP+ TVSIGVA H+ E D LFKR+D+ALYRAK GRNRVLAA Sbjct: 378 ETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEALYRAKASGRNRVLAA 431 >UniRef50_P77302 Uncharacterized protein ydaM n=63 Tax=Enterobacteriaceae RepID=YDAM_ECOLI Length = 410 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 410/410 (100%), Positives = 410/410 (100%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK Sbjct: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS Sbjct: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN Sbjct: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT Sbjct: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND Sbjct: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA Sbjct: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA Sbjct: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 104/417 (24%), Positives = 181/417 (43%), Gaps = 17/417 (4%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL-- 62 N + + ++I P + I N A+ + P + + L + Sbjct: 282 YKNLFEDSLNEIYIFYPQTLKFIAVNRGARENLGYTGEELKEMTPVDLKPEFTLQSFKEL 341 Query: 63 --SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L+ + + + R+++ + + L +L E + +F + T + Sbjct: 342 LEPLLKGEQKQLIFDAMHRRKDGSLYPVEIHL-ELVEFDKEKVFVALVIDIT---ERREM 397 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 +++ + A +I +G++ N AA GY+ E + K Sbjct: 398 EKELKERNEILSTIMEY--AGDAIIMIDDNGKVTFWNPAAERILGYSKEEIIGKDLHMFM 455 Query: 181 MLGRRVMPIMHEIS---HLPGGH----KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 + R+ E L G K + + +G V+ + I + Sbjct: 456 IQDMRLYEAYREAFKKFRLTGKGSVVGKTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAI 515 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 I+ DI+E+KR EE L + D +T + NRR F + E + + +SL++ D D Sbjct: 516 GIIRDISERKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLD 575 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK++ND +GH+ GD VL ++A T++ RK D RWGGEEF++LLP T L+ A LAE Sbjct: 576 HFKNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAE 635 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R +++ + G+ + T S GV + +++D + RVD ALY AK GRN V A Sbjct: 636 ELRKKISETELDGIGKVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 88/252 (34%), Gaps = 15/252 (5%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLR---TGPYSVSSQKELPKY 61 N + + ++ P ++I AN AA + L+ VS+ + + Sbjct: 162 FRNMFENHDIAMILIDPQAGRIIDANKAACNFYGYSRETMLQMDIEAVIGVSTTIDGGQK 221 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 S+ + I QR + + + I T Sbjct: 222 CSEALKKGCNPCI-CFQRLANGEEKLVEIYSSPVDYQGKTL-MHLIVFDITEQW------ 273 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +++ FY F + + + P + + + N A GY E + + ++ Sbjct: 274 -KAKRELEFYKNLFEDSLNEIYIFYP-QTLKFIAVNRGARENLGYTGEELKEMTPVDLKP 331 Query: 182 LG--RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 + ++ + + +H+ DGS V+ + +E +K+ + +V DI Sbjct: 332 EFTLQSFKELLEPLLKGEQKQLIFDAMHRRKDGSLYPVEIHLELVEFDKEKVFVALVIDI 391 Query: 240 TEQKRLEEQLEH 251 TE++ +E++L+ Sbjct: 392 TERREMEKELKE 403 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 2/229 (0%) Query: 23 EEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEE 82 E + A + + ++ L + + +Q DI IL + Sbjct: 55 TEIVTSGEEAVEKALNNIKSPDLILMDIELKGAIDGIDAARIIQQHKDIP-ILFLTANAS 113 Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 + + + + + + + K + +K++ + F + M Sbjct: 114 KEIMEKIKSVSAYGYVLKGVDEYVLISQIEMAFKLYEAKMQLKKREELFRNMFENHDIAM 173 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 +LIDP + G+I+DAN AA NFYGY+ ETM Q + + + L G P Sbjct: 174 ILIDP-QAGRIIDANKAACNFYGYSRETMLQMDIEAVIGVSTTIDGGQKCSEALKKGCNP 232 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 +LA+G + V+ Y+ P++ G LM IV DITEQ + + +LE Sbjct: 233 CICFQRLANGEEKLVEIYSSPVDYQGKTLMHLIVFDITEQWKAKRELEF 281 >UniRef50_B5XX83 Sensory box-containing diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5XX83_KLEP3 Length = 418 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 201/407 (49%), Positives = 276/407 (67%), Gaps = 7/407 (1%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ D+L++P+W+V PF E ++YAN A++ L D++ ++R G YS + +L Sbjct: 1 MLLKELAVFDVLSTPIWVVHPFTESVVYANPASRTLSGDMSLKEMRNGIYSTCPETQLQH 60 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 YL L +I E+ T+Q + ++ C+ L ++ +++FE ++ A + S Sbjct: 61 YLRYLDTMTEIFEVWTLQTGKGLQSVYCKTTLVDTDDSGTLLLFEAVKLLAQNQSIHTGS 120 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 YQR+ GF+ARFF+TN+APMLLIDPS+DG+IVDAN+AAL FY Y+ E M KHTW+IN Sbjct: 121 RRYQRRNNGFFARFFMTNTAPMLLIDPSKDGRIVDANIAALRFYHYSDEEMRNKHTWQIN 180 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 LGR V+PIM+ I+++PGGHKPLNF H LADG+ RHVQTYAGP+ +Y +LMLCI+HDIT Sbjct: 181 TLGRDVIPIMNNIANMPGGHKPLNFTHILADGTLRHVQTYAGPVVLYNIRLMLCIIHDIT 240 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ L+++LE +A HD +TGLLNRR+FY + E + LLLID D FK IND Sbjct: 241 EEVHLKKELEFSAAHDPLTGLLNRREFYRLVEAPSFIAQ----GFCLLLIDIDHFKSIND 296 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 ++GH KGDEVL ++R LE+ + D ++RWGGEEF+L LP +P+ AL LAE IR +V+ Sbjct: 297 IHGHQKGDEVLLVISRILETSVDREDKIYRWGGEEFLLFLPHSPIARALILAEGIRQAVS 356 Query: 361 KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + TVSIGVA H E+ID+LF RVD ALY AKN GRNRV Sbjct: 357 EYQ---TLSVTVSIGVAEHHDGEAIDQLFSRVDKALYVAKNGGRNRV 400 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 102/400 (25%), Positives = 153/400 (38%), Gaps = 16/400 (4%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV---SSQKELPKYLSDLQNQHDIIEI 74 IV E +L + N A+ L+ L +S+ + P +D I Sbjct: 151 IVLDAEGRLTFMNPEAERLLGWSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAG 210 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 T + EE L ++ + A ++ A+ Sbjct: 211 ETYRSDEEYFT-RKDGALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAAKV 269 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 T + +++ G I N A GY+ I GR ++ Sbjct: 270 IETTTEGIMI--TDAGGVIESVNPAFCRSTGYSESEAIGNSPR-ILKSGRHDGEFYRKMW 326 Query: 195 --HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 L G ++ G I+ + I DITE KR +E+++ Sbjct: 327 KALLETGQWQGEIWNRRKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIK 386 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 H A+HDA+T L NR F Q ++L +D DRFK IND YGH+ GD + Sbjct: 387 HQAYHDALTDLPNRLLFIDRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLL 446 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV-SISGLP 368 L +A L R D V R GG+EF +LLP+ ++ A +A+ I S+ + S G+P Sbjct: 447 LQGVAGRLRRAVRDSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIP 506 Query: 369 R--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T SIG+A E + L D A+YRAK GRN Sbjct: 507 SFCITTSIGIAVCPTDGEEAETLMHNADAAMYRAKAQGRN 546 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 10/161 (6%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 I + + L+A + + ++ + ++ LI +G++ N A Sbjct: 109 PIQWAVLRQRVRRLLQAQHTEKALKARETQLSAV--ASALGEGLIVLDAEGRLTFMNPEA 166 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP-------GGHKPLNFVHKLADGS 213 G++ + K I R + E L ++ DG+ Sbjct: 167 ERLLGWSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGA 226 Query: 214 TRHVQTYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAA 253 V + P+ + + HDI+++K++EE+L AA Sbjct: 227 LFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAA 267 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 89/414 (21%), Positives = 165/414 (39%), Gaps = 24/414 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSS---QKELPK 60 +D W+V + +L+ N A L + + + + + Sbjct: 259 QYRAAIDTAADGFWLVD-MQGRLLEVNDAYARLSGYSREELIGMSIPELDAIDNSELVRA 317 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + ++ +E T+ ++++ + + + + + Sbjct: 318 RIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFVFSTDL----------- 366 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 +R ++ + ++ ++ D I+ N A GY + K+ I Sbjct: 367 TEQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPR-IF 425 Query: 181 MLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 GR H + G+ K +G I + + + Sbjct: 426 KSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHVALF 485 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DITE+K++EE + A++D++T L NR+ F+ E + +LLLID DRFK Sbjct: 486 TDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFK 545 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 +ND GH KGD +L AR + +C R+ D V R GG+EF+++L + + +A+ I Sbjct: 546 EVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMASIDRVAQDI 605 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNR 406 S+A+ + SIG++ + + + +D LFK D A+Y AK GRNR Sbjct: 606 LGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYAGRNR 659 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 88/253 (34%), Gaps = 14/253 (5%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQ------KELPKY 61 ++ + ++ + + Y N + L + +++ + + Sbjct: 135 IVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQMETAQEI 194 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 L+ + R+++ T ++ L E ++ G + T Sbjct: 195 NRQLEKEGVWS-GEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRDITKRKLT---E 250 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +K+ Y T + L+D G++++ N A GY+ E + E++ Sbjct: 251 AVMLEKESQYRAAIDTAADGFWLVDM--QGRLLEVNDAYARLSGYSREELIGMSIPELDA 308 Query: 182 LGRRVMPIMHEISHLP-GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + + GG+ + +HK DGS V + G + + D+T Sbjct: 309 IDNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFV-FSTDLT 367 Query: 241 EQKRLEEQLEHAA 253 EQKR EE L AA Sbjct: 368 EQKRAEESLRLAA 380 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 71/251 (28%), Gaps = 14/251 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTF---SQLRTGPYSVSSQKELPK 60 + +D + + +I +++Y N A + + + + + Sbjct: 8 QVQDIVDSIPAATFI-KDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQIERFRE 66 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 ++ IE R+ T T + + Sbjct: 67 KDREVIAGGKQIEYEAPFW--NAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKK 124 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 A + Q + N+ +++ + D I N +GY + KH IN Sbjct: 125 AAAALRLQSQ----IVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIIN 180 Query: 181 MLGRRVMPIMHE---ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIV 236 G + + G ++ DG+T + A + L + Sbjct: 181 APGNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQ 240 Query: 237 HDITEQKRLEE 247 DIT++K E Sbjct: 241 RDITKRKLTEA 251 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 6/124 (4%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + +S P G+IV N A +G + + ++ + Sbjct: 12 IVDSIPAATFIKDAGGRIVYMNHACEEQWGITFD-VLGGTDGSQFFPPEQIERFREKDRE 70 Query: 196 LPGGHKPLNFVHKL---ADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLE 250 + G K + + R P KL+ +CI D+TE K+ L Sbjct: 71 VIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKKAAAALR 130 Query: 251 HAAH 254 + Sbjct: 131 LQSQ 134 >UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BSH2_9GAMM Length = 604 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 161/412 (39%), Gaps = 21/412 (5%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY 61 +T LD + +++ I N + + P + + K Sbjct: 198 LTELEIILDNSPVGIA-FLGQKQRFIRINRKLEKMCGYTEQELRNHTPKILYFSPKGYKT 256 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 + E+ R+++ T+ C + ++++ +P F T Sbjct: 257 FG--NDNSATHEMEQFVRRKDGTSFWCHVKVKEIDPNDPAQGFIWSLEDVT-------EK 307 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + A F T + ++ + I+ N A GY + + K +I Sbjct: 308 RQAEENLRLAATVFETTTE--AILVTDANNHIIIVNPAFTTITGYTFDEVVGKQP-KILS 364 Query: 182 LGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 G ++ L G ++ +G I ++ + + Sbjct: 365 SGHHDAEFYQQMWTSLLQEGKWQGEIWNRRKNGEIYVEWISITTIRDANHQIVQYVAVFT 424 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT++K+ EE + H AHHDA+T L NR F + + +++ ID DRFK Sbjct: 425 DITKRKQNEELILHQAHHDALTNLPNRILFVDRLKQALLTAKRHQGRVAVMFIDLDRFKS 484 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIR 356 +ND GH GD +L +A+ L +C R+ D V R GG+EF ++L + + +A+ + Sbjct: 485 VNDTLGHDFGDLLLKEVAQRLIACIRESDTVARLGGDEFTVVLTQIQNISDIRIIAQRML 544 Query: 357 VSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 S+++ I SIG+A + + L K+ D A+Y+AK +GRN Sbjct: 545 KSLSQPFIQKDNEAFIGGSIGIAFFPKDGQEAETLVKKADIAMYQAKQEGRN 596 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 78/255 (30%), Gaps = 12/255 (4%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 N + + IV ++ N+ L ++ + + Sbjct: 72 FTNAVINTAGSLVIVLDRWGHIVRFNNTCSTLTGYTLEEVKNRYIWNFLLTDDKIESCKQ 131 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 ++EI T QR E + R + + ++ E E +G + Sbjct: 132 YFKN-LVVEISTSQRY-EIEWVMKDKTRRLIDWSHTILTNEHHEVDYVIGTGIDITERK- 188 Query: 125 RKKQGFYARF----FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R + + +++P+ + + + + N GY + + + Sbjct: 189 RADETLARTLTELEIILDNSPVGIAFLGQKQRFIRINRKLEKMCGYTEQELRNHTPKILY 248 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIE-IYGDKLMLCIVHDI 239 + ++ S + + DG++ I+ + + + D+ Sbjct: 249 FSPKGYKTFGNDNSATH----EMEQFVRRKDGTSFWCHVKVKEIDPNDPAQGFIWSLEDV 304 Query: 240 TEQKRLEEQLEHAAH 254 TE+++ EE L AA Sbjct: 305 TEKRQAEENLRLAAT 319 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 14/191 (7%) Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 T EE L + + E I A + + + A K + + Sbjct: 20 TRFEDEESQGLWFEHSVYPVFEKSGTI---NRIAIVSRDITERKQAEDALKHERDFTNAV 76 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM---PIMHE 192 N+A L+I R G IV N GY E + ++ W + ++ Sbjct: 77 -INTAGSLVIVLDRWGHIVRFNNTCSTLTGYTLEEVKNRYIWNFLLTDDKIESCKQYFKN 135 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + + + D + R + + ++ ++ DITE+KR +E L Sbjct: 136 LVVEISTSQRYEIEWVMKDKTRRLIDWSHTILTNEHHEVDYVIGTGIDITERKRADETLA 195 Query: 251 HAAHHDAMTGL 261 +T L Sbjct: 196 R-----TLTEL 201 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 147/373 (39%), Gaps = 17/373 (4%) Query: 41 TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEP 100 T ++ + P ++++ + Q I I + E L ++ Sbjct: 235 TVGEVASRPLLTITEEDSLLAARAMLEQKHIRHIGITRMDGELVG------LLSFSDILA 288 Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 + +E + + + RK + + ++++ +I N A Sbjct: 289 TLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIV--DSTQKIEFVNPAF 346 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQ 218 + GY E + K+ + G + + ++ +G Sbjct: 347 THMTGYTAEEIIGKNPNVLKS-GHHDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEW 405 Query: 219 TYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM 276 I + I DITE+K+ EE++++ A+ D +T L NRR F + Sbjct: 406 LTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIA 465 Query: 277 QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEF 336 Q +++ +D D FK IND GH GD+VL A + C R+GD V R GG+EF Sbjct: 466 NAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEF 525 Query: 337 VLLLPRTP-LDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRV 392 +LLP L+ LAE + V + + T SIG+A + +++ L K Sbjct: 526 TVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNA 585 Query: 393 DDALYRAKNDGRN 405 D A+YRAK+ GRN Sbjct: 586 DTAMYRAKDLGRN 598 Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 36/121 (29%), Gaps = 5/121 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGP---YSVSSQKELPKYL 62 ++ + IV +++ + N A + + P S + K++ Sbjct: 320 RKVIEASLDGIMIVDS-TQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHM 378 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSA 121 + D + R++ L + + +T + + I + T K Sbjct: 379 YTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERI 438 Query: 122 N 122 Sbjct: 439 K 439 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 102/401 (25%), Positives = 161/401 (40%), Gaps = 20/401 (4%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLT-----FSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 WI + ++ +++ ++ + + + ++ L Sbjct: 398 WISDFQKHEIRWSDEVYRIFGMERSRWEGTHGAFMQAVHPGDRERVQAAVDRALAGLEQF 457 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 + R + + L +L+ G T ++Q Sbjct: 458 DVTHRILRPDGTERVVRELASVELSPCGTPARMVGTVQDITEQYH-------LEQEQRLL 510 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 A F ++ A + +G I N GY E + +N GR+ Sbjct: 511 AATFESSQA---IFITDVEGTIQRVNATFTQLTGYTEEEAVGANPRILNS-GRQDRDFYQ 566 Query: 192 EISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEE 247 E+ GH ++ +G + I ++ + + HDIT QK LE Sbjct: 567 EMFRTVRETGHWQGEIWNRRKNGEIFPLHEVVTAIHDDQGEIEYYIAMFHDITRQKELEA 626 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 LEH A +D +T NR F + + + A SLLL+D D FK IND +GH G Sbjct: 627 ALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKRINDTFGHEVG 686 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367 DEVL L L+ R+ D++ RWGGEEFV+LLP T + +AE +R V + + Sbjct: 687 DEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLREQVTATAFPCV 746 Query: 368 PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 T+S+GVA ESI + KR D+A+Y AK GRNRV+ Sbjct: 747 GLVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNRVV 787 Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 78/262 (29%), Gaps = 25/262 (9%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLM----QDLTFSQLRTGPYSVSSQKELPK 60 + + + E +++ AN ++ DL LR + + Sbjct: 10 YAALFEHAPVGLAEMDT-EGRILRANPRLGEMLACDPGDLVGGWLRERLLPEDVEPCEAR 68 Query: 61 YLSDLQN--QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 L + +E+ V + + T P + + T Sbjct: 69 RRGLLDGGCPNCQVEVRLVDATGLARWVEISISRIPATIDSPEALLAAVADIGT------ 122 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 +++ + + A + + P G + + +++ G+ E + W Sbjct: 123 -----RKQAEQRMDSLLHASPAVIYTMHPDNLGTMTWLSRNSVSVTGWAPEQISSNPDWL 177 Query: 179 INM-----LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-- 231 GR V + +S G LN+ ++ +G + ++ I + Sbjct: 178 TTHIAPEDYGRCVCQVRRWLSDGAQGFCRLNYRQRMPNGHWQWLEDQITAIRDATGAVTE 237 Query: 232 MLCIVHDITEQKRLEEQLEHAA 253 ++ DI + E LE A Sbjct: 238 LVGAFQDIGARVETERHLEKIA 259 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 50/198 (25%), Gaps = 27/198 (13%) Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTET-EPVIIFEGIEAPATLGLKASRSANYQ 124 + QR + + + V G ++ R Sbjct: 199 DGAQGFCRLNYRQRMPNGHWQWLEDQITAIRDATGAVTELVGAFQDIGARVETERHLEKI 258 Query: 125 RKKQGFYARFFLTNSAPMLLID----PSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + P ++ P G A+ + +G E E Sbjct: 259 AR------------NLPGVIYQYRQHPDGRGCYPYASEGMTDIFGIAPEEA--MRDAEAV 304 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKL------ADGSTRHVQTYAGP-IEIYGDKLML 233 + + + + L + G T ++ +A P G L Sbjct: 305 FRVIHPEDVERIRASIEASMRSLEPWLQRYRVMSPERGET-WLEGHASPEALDDGSVLWH 363 Query: 234 CIVHDITEQKRLEEQLEH 251 ++ DIT++ R E L Sbjct: 364 GVILDITQRVRAEHALHR 381 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 86/414 (20%), Positives = 154/414 (37%), Gaps = 16/414 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + + + L+ N L + + +L + Sbjct: 562 KFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKR 621 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + D + R +R + + G++ T+ + + Sbjct: 622 LV----DQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITGVDCMLTIARDITE-RHL 676 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 ++K A F + +L+ D + +I N A GY+ + + G Sbjct: 677 MQEKLQLAATVFENTAEGVLITDIDQ--RISAVNRAFSEITGYSEIEALGQTPR-LLASG 733 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 + + H GH +K +G + ++ + + DI Sbjct: 734 QHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADI 793 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 + K + +L++ AHHD +TGL NR F + + + ++L +D DRFKHIN Sbjct: 794 SSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHIN 853 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVS 358 D GH GD +L +A+ L+ R D V R GG+EF++LLP A ++A + Sbjct: 854 DSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLAC 913 Query: 359 VAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLA 409 +G F + SIG++ + + L + D A+YR+K GRNRV A Sbjct: 914 FNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEA 967 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 94/251 (37%), Gaps = 9/251 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPY-SVSSQKELPKYL 62 H ++ L++ W + Y + A+ L+ LR G + S+ ++ Sbjct: 312 HYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQ 371 Query: 63 SDLQNQHDIIEILTVQRK---EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + ++ ++ + + L R + + E + G+ + + R Sbjct: 372 AYCDSETAAGRDHSLDYRVIRADGQPLWVR-NIVSMIEHGHQPVMRGLMIDIS---ETKR 427 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + R + +A F +LLI DG +++ N A G + + + ++ Sbjct: 428 TEDALRLSEQKFASVFQQCPD-ILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDL 486 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 ++ G + GG + L + ++G T A E+ G ++ V DI Sbjct: 487 DLWGVEGSGPLLLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAVRDI 546 Query: 240 TEQKRLEEQLE 250 ++ K ++QL+ Sbjct: 547 SQLKETQQQLQ 557 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 86/256 (33%), Gaps = 12/256 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPK 60 + + I + L+ N A + + + + + P Sbjct: 438 KFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPL 497 Query: 61 YLSDL-QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 L L Q +E+ + + +L T +++ + Sbjct: 498 LLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVV------AVRDISQLKE 551 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + + +A+ F + LL+ DG +++ N GY+ + + ++ Sbjct: 552 TQQQLQTSEEKFAKAFHASPDG-LLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDL 610 Query: 180 NML-GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + + + + G + + +DG R + A P+ I G ML I D Sbjct: 611 GIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITGVDCMLTIARD 670 Query: 239 ITEQKRLEEQLEHAAH 254 ITE+ ++E+L+ AA Sbjct: 671 ITERHLMQEKLQLAAT 686 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 2/163 (1%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 + L + + I + + + + + ++ R + + + + + Sbjct: 271 GLPTVLLLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADAN 330 Query: 150 DGQIVDANLAALNFYGYNHETMC--QKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH 207 D + A + GY ++ + G L++ Sbjct: 331 DFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQAYCDSETAAGRDHSLDYRV 390 Query: 208 KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 ADG V+ IE +M ++ DI+E KR E+ L Sbjct: 391 IRADGQPLWVRNIVSMIEHGHQPVMRGLMIDISETKRTEDALR 433 >UniRef50_C6P0P9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0P9_9PROT Length = 1080 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 89/419 (21%), Positives = 160/419 (38%), Gaps = 30/419 (7%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 L+ W ++ L AN A + + + + + + Sbjct: 653 RYMLVLETAMDGFW-MADANGFLEDANEAYVKMSGYTMKELVGMHISELEANESEEAVKA 711 Query: 64 DLQNQ--HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 ++ T R+++ + + + L ET +F + Sbjct: 712 HMEKLMAQGYGRFETRHRRKDGRVIDVEVAVTFLVETGKFFVFSH-------------NI 758 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +++ + ++ I+ N A + GY E K+ Sbjct: 759 TQRKQAEQALRIAAAAFETHEAILITDAQVNIIRVNKAFTDITGYTPEEAMGKNPR-FMS 817 Query: 182 LGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 GR + L G + G ++ + + I Sbjct: 818 SGRHDREYYAAMWQQILETGTWAGEIWDRRKSGEIYPKWMNITVVKNDRGETTQYVSIFS 877 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE+K+ E+++ + A +D +T L NRR F S+L +D DRFK Sbjct: 878 DITERKKAEDEIRNLAFYDPLTLLPNRRLFLERFHTALAASARYGDFGSILFLDLDRFKL 937 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT--PLDTALS----L 351 +ND +GH GD +L +A +++C R+ D V R+GG+EFV+LL + A + Sbjct: 938 LNDKFGHDYGDLLLVEVASRIKACVREIDTVARFGGDEFVVLLESISSDREEAAHKSGVV 997 Query: 352 AETIRVSVAKVSISGLP--RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 AE IR ++++ R + SIG++ + G ++S+D L K D A+Y+AK+ GRN V Sbjct: 998 AEKIRDALSRPYRLKELEYRCSPSIGISLYHGNDDSMDVLLKYADAAMYQAKDAGRNNV 1056 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 88/255 (34%), Gaps = 16/255 (6%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ N + + ++ + L+ AN A ++ + + Q + Sbjct: 532 MLRRNEALMRNSMEGIHVMDV-DGNLLEANEAFCNMLGYAREEMMHLHVTDWNKQFSAGE 590 Query: 61 YLSDLQNQHDIIE-ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 S +Q++ E TV ++++ T L + + +F SR Sbjct: 591 LRSRMQSRIGKSETFETVHQRKDGTLLDVEICATGVEIDGKGYMFAS-----------SR 639 Query: 120 SANYQRKKQGFYARFFLT-NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 ++K Y R+ L +A +G + DAN A + GY + + H E Sbjct: 640 DITERKKLLSVYRRYMLVLETAMDGFWMADANGFLEDANEAYVKMSGYTMKELVGMHISE 699 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + H + G+ H+ DG V+ + G H+ Sbjct: 700 LEANESEEAVKAHMEKLMAQGYGRFETRHRRKDGRVIDVEVAVTFLVETGK--FFVFSHN 757 Query: 239 ITEQKRLEEQLEHAA 253 IT++K+ E+ L AA Sbjct: 758 ITQRKQAEQALRIAA 772 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 8/240 (3%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 ++ L V+ + + + + N + ++Q + P ++ ++ Sbjct: 415 ALIEALP-GVFYMIDAQGRFMMWNHNLEQVVQRSPEEMASSHPLDFFEGEDKVNIEKAIR 473 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 + + E ++ T ++ EG+ LGL S+ R Sbjct: 474 QVFEAGDASV-----EAELVAKDGSKTPFHFTGKRVMHEGMPILVGLGLDISKQREDSRL 528 Query: 127 KQGFYAR-FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + R L ++ + DG +++AN A N GY E M H + N Sbjct: 529 SEAMLRRNEALMRNSMEGIHVMDVDGNLLEANEAFCNMLGYAREEMMHLHVTDWNKQFSA 588 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL 245 + + G + VH+ DG+ V+ A +EI G M DITE+K+L Sbjct: 589 G-ELRSRMQSRIGKSETFETVHQRKDGTLLDVEICATGVEIDGKGYMFASSRDITERKKL 647 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 R + TE G A A + S + +++ + + + P + G+ Sbjct: 374 RDIRLTETGKGEIGKLADALNMMLDRLSGSDLIERENTFRKAL-IEALPGVFYMIDAQGR 432 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADG 212 + N + E M H + +V G + DG Sbjct: 433 FMMWNHNLEQVVQRSPEEMASSHPLDFFEGEDKVNIEKAIRQVFEAGDASVEAELVAKDG 492 Query: 213 STRHVQTYAGPIEIYGDKLMLCIVHDITEQKR----LEEQLEH 251 S + G +++ + DI++Q+ E L Sbjct: 493 SKTPFHFTGKRVMHEGMPILVGLGLDISKQREDSRLSEAMLRR 535 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 146/369 (39%), Gaps = 20/369 (5%) Query: 47 TGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRK---EEETALSCRLVLRKLTETEPVII 103 + + V +++ ++ + + + + + + + + I+ Sbjct: 836 SKVFEVIHPEDVDDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGSIL 895 Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 + G + K ++ F + +++ + +I+ N A Sbjct: 896 WHGFITDISQHKKTEAQI-------ELASKVFEQSREGIMI--TDSNQKILMVNEAFSEI 946 Query: 164 YGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYA 221 GY+ E K + GR + GH ++ +G Sbjct: 947 SGYSVEETLGKTPRML-ASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSI 1005 Query: 222 GPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 + + I +DI++ K EE+++H AH+D +TGL+NR Sbjct: 1006 SRGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTAD 1065 Query: 280 AIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLL 339 +LL ID D FK++ND GH GD++L + + + R D + R GG+EF+++ Sbjct: 1066 RNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVV 1125 Query: 340 LPRTPLDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDAL 396 LP T + A+ +AE I S++ T SIG+A + + D L K D A+ Sbjct: 1126 LPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAM 1185 Query: 397 YRAKNDGRN 405 Y+AKNDGRN Sbjct: 1186 YQAKNDGRN 1194 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 78/260 (30%), Gaps = 24/260 (9%) Query: 14 SPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ-----NQ 68 + I+ ++ I N +++ + + + K+L + + L Sbjct: 361 IGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAEVNAQLTDIESGKS 420 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 L + ++ V E V + T + + + Sbjct: 421 EGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQNQL 480 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 ++ P L+ +G + N + F+G + K ++ + + Sbjct: 481 NAL-----VHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFV--DKALAD 533 Query: 189 IMHE----ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQ 242 E + ++ +G T P++ +++ + + DI+++ Sbjct: 534 FFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKR 593 Query: 243 KRLEEQLEHAAHHDAMTGLL 262 K E QLE +T L Sbjct: 594 KEDEAQLER------LTKLY 607 Score = 63.2 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 12/174 (6%) Query: 89 RLVLRKLTETEPVIIFEGIEAPATLGLKAS----RSANYQRKKQGFYARFFLTNSAPMLL 144 LV + + + GI L + + + + +F+ M + Sbjct: 306 DLVFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEKVLQKFYELPFIGMAI 365 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL- 203 +D D + + N Y+ + + QK EI + + + +++ + G Sbjct: 366 LDAQHD-KWIRFNDRLPKILRYSSQDLAQKSFNEIIHP-KDLAEVNAQLTDIESGKSEGF 423 Query: 204 --NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR-LEEQLEHA 252 +D S + ++ L V D+TE K E +EH Sbjct: 424 TTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQ 477 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 155/408 (37%), Gaps = 15/408 (3%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 ++ + PV+ E + + N A L+ + Y V+ +Y + Sbjct: 661 IEAIPGPVF-YKSQEGRYLGCNQAFLELIGKSRDEVVGATVYDVAPADLADRYKAA---- 715 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 D + + E L R + + G +G+ + + + Sbjct: 716 DDELLARLGSQVYEARVLDADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEA- 774 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + +S+ + + DG I+ N A GY + + ++ + G + Sbjct: 775 RLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQS-GFQDRR 833 Query: 189 IMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKR 244 ++ G G ++ DG T ++ K + + DITE +R Sbjct: 834 FYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITELRR 893 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 +QL+H AHHD +TGL NR + ++ ID DRFK+IND GH Sbjct: 894 AHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGH 953 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL-SLAETIRVSVAKVS 363 GD VLC +A L R+ D V R GG+EF++++ TA+ +AE I + Sbjct: 954 QVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASP 1013 Query: 364 --ISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVL 408 + SIG++ + L K D A+YRAK GRN Sbjct: 1014 VTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYE 1061 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 70/244 (28%), Gaps = 13/244 (5%) Query: 13 TSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG----PYSVSSQKELPKYLSDLQNQ 68 +P+ I + + N + + + + S + +E + L ++ Sbjct: 270 AAPIGIAFVRDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDE 329 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 K + + CR+ EP + T +A R+ ++Q Sbjct: 330 CGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQ 389 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RV 186 F + + RD I N + +GY + + T R Sbjct: 390 AL---IFERAPTGIAFL---RDRVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWRE 443 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDITEQKRL 245 G + ADG+ Q + + + + D+T ++ Sbjct: 444 AGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLLNPANPAEGYVWLFEDVTARRAA 503 Query: 246 EEQL 249 EE L Sbjct: 504 EEAL 507 Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 83/259 (32%), Gaps = 20/259 (7%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL-SDLQNQ---HDI 71 + I ++ N + + L + + E + + + + + Sbjct: 523 IGISYHRNRMILRCNRRCEEIFGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGESASGET 582 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY-------- 123 + + ++ + T + + R + E+ + A T A ++ Sbjct: 583 FDGELLYQRRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQRAAEQALRQSHLELEQR 642 Query: 124 -----QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 Q + L + P + S++G+ + N A L G + + + ++ Sbjct: 643 VADRTLELSQQLHFMRQLIEAIPGPVFYKSQEGRYLGCNQAFLELIGKSRDEVVGATVYD 702 Query: 179 INMLGRRVMPIMHEISHLPG-GHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCI 235 + + L G + ADG R V + ++ + Sbjct: 703 VAPADLADRYKAADDELLARLGSQVYEARVLDADGHYRDVIFHKATYGKPGENGGGLVGV 762 Query: 236 VHDITEQKRLEEQLEHAAH 254 + DITE+KR+E +L AA Sbjct: 763 MLDITERKRMEARLLQAAT 781 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 32/264 (12%), Positives = 78/264 (29%), Gaps = 21/264 (7%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE---- 57 + LD S + +V + N A+ L + + Sbjct: 11 LLEYKAILD--HSGIAVVCTRSRLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDDASCDA 68 Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + I+++ T + + + L+ R + P + I T + Sbjct: 69 LRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEVLT 128 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 ++ ++Q F ++++ R+ I N GY + + + T Sbjct: 129 RDTSARLLREQQL---IFENAETGIVIL---RERIIQRCNRRFAELLGYAADELVGQSTR 182 Query: 178 EINMLGRRVMPIMHE--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLC 234 + + G + + + +G + + D+ + Sbjct: 183 LYYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVW 242 Query: 235 IVHDITEQKRLEEQLEHAAHHDAM 258 + D++E++ AA DA+ Sbjct: 243 LYEDVSEKRAS------AAAMDAL 260 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 74/264 (28%), Gaps = 19/264 (7%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL-- 58 ++ + + + I+ E + N L+ + +E Sbjct: 135 LLREQQLIFENAETGIVIL--RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWL 192 Query: 59 --PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + + I T+ R+ + C + + P + + + Sbjct: 193 ETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVWLYEDVSEKRA 252 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 ++ + + ++Q F + + RD I N + +GY+ + + T Sbjct: 253 SAAAMDALLREQTL---IFEAAPIGIAFV---RDRIIQRCNPSLERIFGYSPGQLIGQST 306 Query: 177 WEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLML 233 R ++ G + +DG + ++ Sbjct: 307 RCFFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLV 366 Query: 234 CIVHDITEQKRL----EEQLEHAA 253 + D+TE+++ E L A Sbjct: 367 WLFEDVTEKRQADRAMEALLREQA 390 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 79/258 (30%), Gaps = 15/258 (5%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG----PYSVSSQK 56 ++ + + + + + N + + + L S ++ + Sbjct: 385 LLREQALIFERAPTGIAFLRDR--VIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWR 442 Query: 57 ELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 E + + ++ + + T + C++ L P + + T Sbjct: 443 EAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLLNPANPAEGYVWLFEDVTARRA 502 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 A + + + + + ++A + + R+ I+ N +GY + + T Sbjct: 503 AEEALV-----ESLWEQQLIFDNAMIGI-SYHRNRMILRCNRRCEEIFGYLEGGLAGQPT 556 Query: 177 WEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLML 233 + + ++ G +++ DG+ V I E + + Sbjct: 557 RVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSETWI 616 Query: 234 CIVHDITEQKRLEEQLEH 251 D+T Q+ E+ L Sbjct: 617 WAYADVTAQRAAEQALRQ 634 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 163/408 (39%), Gaps = 17/408 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++T + + +++ E + ANSA +L + + + +++ + Sbjct: 138 QYYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEEDRAVTVK 197 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 ++QN ++ L + + S R++ + I + + Sbjct: 198 EMQNLSKGLKTLYFENRYRHKNGSYRVIAWSAAAADQDSIICAVGRDIS---------KE 248 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 KQG + + ++ ++ G I D N A GY+ + + T + G Sbjct: 249 NAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS-LLRSG 307 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 R ++ H G ++ G+ I + + I DIT+ Sbjct: 308 RHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKI-DGQNSGFVAIFTDITQ 366 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 K EEQL+ AH+D +T L NR + + ++ ++ +D D FK+IND Sbjct: 367 LKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDS 426 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVA 360 GH GD++L A L R D V R GG+EF++LL D A ++AE I ++ Sbjct: 427 LGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALR 486 Query: 361 KVSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 K +I + S+G++ + ++ + L D A+Y AK GRN Sbjct: 487 KPTILEGRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRN 534 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 151/396 (38%), Gaps = 34/396 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 ++ + ++++ N AA++L + L ++ EI + Sbjct: 692 LILDLQGKVLFVNPAAEILFGRKQEDLMGQ-------------ILGIPIIVNNYSEIEIL 738 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q + + RLV E + + Q+ ++ + T Sbjct: 739 QPSGKLIIVRMRLVKIIWQEKNAFLA------------SLVDVTDIQQAQEQLKILYQAT 786 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL- 196 +P+ ++ +G I N GY + ++ I G +I Sbjct: 787 EQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQNPR-ILKSGETTTEEYKQIWKTI 845 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G F +K +G PI+ + + DITE+K + L + A Sbjct: 846 TSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQA 905 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+TGL NR + +Q + +++ ID D FK +ND GH GD +L Sbjct: 906 NYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQK 965 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISGLPRF 370 +++ L+ C RK D V R GG+EF+++LP +A I S+ K ++ Sbjct: 966 VSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFI 1025 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG+ + + L + D A+Y K GRN Sbjct: 1026 SASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRN 1061 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 15/249 (6%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS--VSSQKELPKYLSDLQNQHDIIEILT 76 + + L Y N A + + ++ P+ ++ + ++ + I Sbjct: 323 IGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQQGETLIQTIRTRGQWI-GEL 381 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 + +K++++ ++ + + I+ + + + + +K Sbjct: 382 IAKKKDKSLFKAQVSANLVKNEANIAIY---IMISVMDVSQQQGTEESLQKLLRLYTNL- 437 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 T +AP+ + G+ + AN AL G + + R I + Sbjct: 438 TQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDDRARVFNEWIKSI 497 Query: 197 PGGH-KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL---- 249 + ++ +DG+ V A P K+ L + DITE+K EE Sbjct: 498 QTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDITERKNAEEATNKIN 557 Query: 250 -EHAAHHDA 257 + A DA Sbjct: 558 AQMQAIFDA 566 Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 71/253 (28%), Gaps = 27/253 (10%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 D ++ + + ++ + + Q+ LP+ + Sbjct: 559 QMQAIFDAFPDILFRID-QQGTILD-----YKTQDHHSLYCSPQEFIGRTVQEVLPESVG 612 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 +L + +++ + E L L R + A ++ Sbjct: 613 NLLYEGVQKALVSGEIVSIEYFLIIALQKRFFDARIVRLSPVETIAVVRDISDRKQTELA 672 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 R+ + ++ P L+ G+++ N AA +G E + + ++ Sbjct: 673 LRESEERLKTII--STNPNGLLILDLQGKVLFVNPAAEILFGRKQEDLMGQILGIPIIVN 730 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 G V+ I L + D+T+ + Sbjct: 731 NYS-----------------EIEILQPSGKLIIVRMRLVKIIWQEKNAFLASLVDVTDIQ 773 Query: 244 RLEEQLE--HAAH 254 + +EQL+ + A Sbjct: 774 QAQEQLKILYQAT 786 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 82/265 (30%), Gaps = 28/265 (10%) Query: 10 DLLTSPVWIVSPFEEQLIYAN-SAAKLLMQ---------DLTFSQLRTGPYSVSSQKELP 59 ++ + ++ ++I N AA +L L R + + ++ Sbjct: 172 NIELNEAELLFDKNHKIISLNSPAAIILTGGKNQAEALIFLQKEMKRKLLWLKTQIEQFS 231 Query: 60 KYLSD---------LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP 110 + + Q + E +R E RL + + +E Sbjct: 232 RSNQEENKCKIFIKTQLEQQRFEAKFTRRAEGTAVTLTRLF----DLPDSQTNVQQLEKR 287 Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN-HE 169 + + + + + F S+ + G + N A L + Y+ + Sbjct: 288 LKPEVTPKDNPHNPPSENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDD 347 Query: 170 TMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + K + ++ ++ I G + K D S Q A ++ + Sbjct: 348 EVLGKPFLNFWQIDQQGETLIQTIR--TRGQWIGELIAKKKDKSLFKAQVSANLVKNEAN 405 Query: 230 KLMLCIVH--DITEQKRLEEQLEHA 252 + ++ D+++Q+ EE L+ Sbjct: 406 IAIYIMISVMDVSQQQGTEESLQKL 430 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 104/416 (25%), Positives = 173/416 (41%), Gaps = 22/416 (5%) Query: 6 FNTLDLLTSPVWIVSP----FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY 61 ++ + V + P +++ Y N+A + + + P + P Sbjct: 11 RAAVEQSYNAVVVTDPGLEGAGQRIRYVNAAFERMTGYTREELIGHTPKILQGAATDPAV 70 Query: 62 LSDLQ---NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 L L+ E + +++ ++ + + T L Sbjct: 71 LRTLRQRLAAGQGFEGSAINYRKDGRPYHVEWLISPVRDDSG---------RITAWLSIQ 121 Query: 119 RSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R ++R+ + S+ ++ +G IV N GY + + + Sbjct: 122 RDVTHERELEQEARLLSTAVESSAASILITDTEGCIVYVNRGFEQITGYRRDEVLGETPA 181 Query: 178 EINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 +N G + ++ G F+++ G+ +++ P+ ++ + Sbjct: 182 VLNS-GEQSARFYRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITPVRADQGQVVRYV 240 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 DITE+ R+EE+L+ AA DA+TGL NR F + E + SLL+ D D Sbjct: 241 ATGKDITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLD 300 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK +ND +GH GD VL ALA + + R D V RWGGEEF++LLP TPL A LAE Sbjct: 301 HFKAVNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAE 360 Query: 354 TIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 +R VA T S GV +++ L +R D+ALYRAK+ GR+RV Sbjct: 361 KLRERVAAHRFPHGAPVTASFGVCALRDDDTCRTLVRRADEALYRAKHLGRDRVEC 416 >UniRef50_A0L7S5 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S5_MAGSM Length = 571 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 95/407 (23%), Positives = 162/407 (39%), Gaps = 27/407 (6%) Query: 21 PFEEQLIYANSAAKLLMQDLTFSQLRTGPY---------SVSSQKELPKYLSDLQNQHDI 71 +++I+ N A + L++ + T S+ Q+ L+ L+ + + Sbjct: 166 DNAQRIIFLNPAGEKLLEYSESALHLTTLNEQLIPHTCGSLHDQQSADHMLAALRGETEQ 225 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 I T+ R L ++ I+ + L + R + ++ Sbjct: 226 ISGETLFRTR-------TGKLIPISFNAAPILDGHFLSGGVLSFRDIRDQREKEERLKLA 278 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 A+ F N + L+ + IVD N A GY E + + E+ R Sbjct: 279 AKIF--NHSQEGLVVLDAERIIVDVNPAFSYITGYTREEVIGRSP-ELLRSQRHDAAFYQ 335 Query: 192 EISHLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEE 247 I G+ + +G I ++ + + DIT +K EE Sbjct: 336 SIWQQAENQGNWQGEIWRRRKNGEEFPEWLSLSIIRGENQQISHYIGLFSDITTRKIAEE 395 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +L+H AHHD +TGL NR + + ++L ID D FK +ND YGH G Sbjct: 396 KLKHQAHHDPLTGLPNRSLLEDRLQQAVSKARRYEGKIAVLYIDLDHFKPVNDNYGHEAG 455 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAETIRVSVAKV--SI 364 D VL ++ + R+ D R GG+EFV +L + + +A+ + ++ K Sbjct: 456 DAVLREISARIRYELRQSDTAARVGGDEFVAVLTEIREEHLVMGVAQKLIHAIQKPVNFG 515 Query: 365 SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + SIG++ + SI +L K D A+YRAK +GRNR A Sbjct: 516 NESFQVGCSIGISLYPIHGNSITKLLKSADTAMYRAKQEGRNRFCVA 562 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 56/215 (26%), Gaps = 16/215 (7%) Query: 51 SVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP 110 + + L L+ I + + + +E Sbjct: 69 VMMPDMDGLSVLRQLKANPPTQNIPVIMVTGNDRPRDLAHAFEEGATDYITKPIRRVELL 128 Query: 111 ATLG--LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L +K R+ R + T S L+ +I+ N A Y+ Sbjct: 129 ARLRSIIKLERAMQQVRSSEKRLRDL--TASLGEGLLSVDNAQRIIFLNPAGEKLLEYSE 186 Query: 169 ---------ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQT 219 E + + ++ M + + G + Sbjct: 187 SALHLTTLNEQLIPHTCGSL--HDQQSADHMLAALRGETEQISGETLFRTRTGKLIPISF 244 Query: 220 YAGPIEIYG-DKLMLCIVHDITEQKRLEEQLEHAA 253 A PI + DI +Q+ EE+L+ AA Sbjct: 245 NAAPILDGHFLSGGVLSFRDIRDQREKEERLKLAA 279 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 96/415 (23%), Positives = 156/415 (37%), Gaps = 17/415 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG-PYSVSSQKELPKYL 62 + P+ ++ + I N A L+ + +QL +S ++ Sbjct: 722 AFRRLFEDAKDPLLLL--KDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQPDGQA 779 Query: 63 SDLQNQHDIIEILTVQR-KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 S + I L + + E T + T I G TL S Sbjct: 780 SGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRDISE-R 838 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + A F ++ +++ RD +I++ N A GY + + + Sbjct: 839 RVTETRLRLLAAAFEHSAEAIMV--SDRDNRILEVNDAFCRLTGYAADEVRGSDPR-LLS 895 Query: 182 LGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVH 237 GR + GH + DGS I + + Sbjct: 896 SGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFV 955 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA--IAQDYSLLLIDTDRF 295 DI+E+K EE++ H AH D +T L NR + + +++ +D DRF Sbjct: 956 DISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRF 1015 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K+IND GH GD +L +A L S R D+V R GG+EFV++L A +A I Sbjct: 1016 KNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKI 1075 Query: 356 RVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 ++++ T SIG+A ES++ L + D A+Y AK+ GRN V Sbjct: 1076 LKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNV 1130 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 81/264 (30%), Gaps = 29/264 (10%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQ----KELPKYLSDLQNQHDI 71 V IV + ++ N + + + +++ + ++ Sbjct: 485 VGIVHLRQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIEVFEKIGARAYAVVAENRN 544 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 R+++ + L R + ++P + A + +A + + Sbjct: 545 FSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFADISERREAEEESRNLLQ----- 599 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 +P+ ++ +R+ +I N + GY+ ++ + G Sbjct: 600 ----AVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQS-GEAPSDTYR 654 Query: 192 EISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEE 247 + L G F ++ +G + PI + L + D+TE+ R ++ Sbjct: 655 SLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADK 714 Query: 248 QLE--HAAHHDAMTGLLNRRQFYH 269 L+ A RR F Sbjct: 715 LLQESEEAF---------RRLFED 729 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 95/255 (37%), Gaps = 18/255 (7%) Query: 11 LLTSPVWIVSP-FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQH 69 + SPV IV ++ Y N + + + P + S + L Sbjct: 601 VEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSLWQTL 660 Query: 70 DIIEILT---VQRKEEETALSCRLVLRKLT-ETEPVIIFEGIEAPATLGLKASRSANYQR 125 ++ T R++ + + + + V + ++ T L R+ + Sbjct: 661 LEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERL---RADKLLQ 717 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGR 184 + + + R F P+LL+ +DG +D N A L GY + + + +I+ + Sbjct: 718 ESEEAFRRLFEDAKDPLLLL---KDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQ 774 Query: 185 RV------MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + L G+ + H+ ADGS V+ PI + G+ ++ + D Sbjct: 775 PDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRD 834 Query: 239 ITEQKRLEEQLEHAA 253 I+E++ E +L A Sbjct: 835 ISERRVTETRLRLLA 849 Score = 74.8 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 56/229 (24%), Gaps = 14/229 (6%) Query: 19 VSPFEEQLIYANSAAKLLM----QDLTFSQLRTGPYSVSSQKELPKY-LSDLQNQHDIIE 73 ++ + L+YAN A + ++ YS L L L Sbjct: 362 MAQLDGSLLYANPALRRMIDMPQGAACSDYSFKQFYSREEANRLQHAVLPMLLPAGQWTG 421 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 + ++ T + + + + + A + + R+ Sbjct: 422 EIELRSLSGRTTPAIHTLFVVHNTADEPPVIATVLADIS---ERKEMEERNRQLLAEMET 478 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + R +V N +GY + K + I Sbjct: 479 LLGNALVGI---VHLRQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIEVFEKIGARA 535 Query: 194 SHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYG-DKLMLCIVHDI 239 + ++ + DGS I+ + + DI Sbjct: 536 YAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFADI 584 Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 4/155 (2%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 I + R + + L +A + DG ++ AN A Sbjct: 318 IWRSEQREAKVVADLVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALR 377 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQT 219 C ++++ + H + LP G + G T Sbjct: 378 RMIDMPQGAACSDYSFKQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIH 437 Query: 220 YAGPIEI--YGDKLMLCIVHDITEQKRLEEQLEHA 252 + ++ ++ DI+E+K +EE+ Sbjct: 438 TLFVVHNTADEPPVIATVLADISERKEMEERNRQL 472 >UniRef50_C5V5L2 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5L2_9PROT Length = 560 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 90/409 (22%), Positives = 160/409 (39%), Gaps = 13/409 (3%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 L+ VW + ++ ++ K ++ ++ P+ L +Q Sbjct: 143 ALEGAGDGVWDWNVQTNEVKFS-VRLKEMLGYADDEIADH--LDEWMRRIHPEDLPKVQA 199 Query: 68 QHDIIEILTV-QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 + E L + + + V+ F+ P + + ++ Sbjct: 200 DVAAYFAGALPAYFNEHRLLCKDGRWKWILDRGRVVSFDAAGEPLRMIGTHTDIDMLKQA 259 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ + N+ ++ D +IV N A GY E + K+ + G+ Sbjct: 260 EEMLNLSSTVFNTVDEAILVCDADNRIVMVNPAFTRVTGYQAEEVIGKNPH-LLSSGKHD 318 Query: 187 MPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQ 242 ++ G ++ +G + + K + DIT + Sbjct: 319 ADFYRQLWAQLTCTGSWCGELWNRRKNGELYVEWSTIKQVRDPHGKLTHYVAAFSDITLR 378 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K EE + H A HDA+T L NR +L+ +D D+FK +ND Sbjct: 379 KADEENIRHQAQHDALTDLPNRVLLIDRLRQALSLAKRDKMHLALMYLDLDQFKPVNDTL 438 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAK 361 GH+ GD +L +A + SC R+ D V R GG+EFV+LL + AL++AE IR+++ + Sbjct: 439 GHAVGDLLLQEVAARIRSCVREADTVARMGGDEFVVLLTSSEDQRDALTVAEKIRIALEQ 498 Query: 362 VSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 V + + S+GVA + S EL + D A+Y AK GRN+V Sbjct: 499 VFQISGARLQISSSLGVAVYPEHGASEHELLEHADIAMYYAKQSGRNQV 547 Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 44/152 (28%), Gaps = 9/152 (5%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + + + ++ + + + F A + D + V ++ Sbjct: 114 DDLIRSIRYAMSRAKLEQRLIEAEERWR--FALEGAGDGVWDWNVQTNEVKFSVRLKEML 171 Query: 165 GYNHETMCQK-HTWEINMLGRRVMPIMHEISHLPGGHKPL---NFVHKLADGSTRHVQTY 220 GY + + W + + + +++ G P DG + + Sbjct: 172 GYADDEIADHLDEWMRRIHPEDLPKVQADVAAYFAGALPAYFNEHRLLCKDGRWKWILDR 231 Query: 221 AGPI-EIYGDK--LMLCIVHDITEQKRLEEQL 249 + + M+ DI K+ EE L Sbjct: 232 GRVVSFDAAGEPLRMIGTHTDIDMLKQAEEML 263 Score = 44.4 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 41/134 (30%), Gaps = 5/134 (3%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 M+ + + + + +V + +++ N A + + P+ +SS K Sbjct: 262 MLNLSSTVFNTVDEAI-LVCDADNRIVMVNPAFTRVTGYQAEEVIGKNPHLLSSGKHDAD 320 Query: 61 YLSDLQNQHDIIEILT----VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + L Q +RK E + + + + + + TL Sbjct: 321 FYRQLWAQLTCTGSWCGELWNRRKNGELYVEWSTIKQVRDPHGKLTHYVAAFSDITLRKA 380 Query: 117 ASRSANYQRKKQGF 130 + +Q + Sbjct: 381 DEENIRHQAQHDAL 394 >UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V50_RHOFD Length = 678 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 83/413 (20%), Positives = 152/413 (36%), Gaps = 14/413 (3%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 L+ VW + +++++ K + + P L+ ++ Sbjct: 263 ALEGAGDGVWDRNLQTGEVVFS-KRYKEIYGFAADE--LENHTEAWDARVHPDDLARIEA 319 Query: 68 QHDIIEILTVQRKEEETALSCR-LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 E + C+ + + V+ + P + + + Sbjct: 320 DRAAYFAGEKSSYANERRMQCKDGSWKWILSRGMVVARDAQGQPLRMIGTHTDITARHER 379 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ + + + + +I+ N A GY + ++ ++ G Sbjct: 380 EEALRLASTVILTMDEAVTVTNMRNEIISVNPAFTVITGYFASEVIGRNP-KLMASGTHS 438 Query: 187 MPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQ 242 ++ G+ ++ G + + + DI+E+ Sbjct: 439 ATFYQDMWAKLATTGNWHGEICNRRKSGKLYVEWLSIKQVRDEQGVPSHYVAVFSDISER 498 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K E +++H AH D +T L NR F + +L+ +D DRFK +ND Sbjct: 499 KASEVRMQHLAHFDVLTNLPNRALFSDRLRQAIAKARRDKTQLALMFMDLDRFKPVNDQL 558 Query: 303 GHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVA 360 GH GD +L +AR L C R+ D V R GG+EFV++LP + A +AE I ++ Sbjct: 559 GHQVGDLLLQEVARRLLDCVRRESDTVARIGGDEFVVMLPDLETVQAATLVAEKILAALN 618 Query: 361 KVSISGLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 V G + SIG+A + + L K D A+Y AK +GRNRV A Sbjct: 619 LVFEIGEHRIHISSSIGIAIFPEHGQDENHLLKSADAAMYLAKENGRNRVQVA 671 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 153/396 (38%), Gaps = 34/396 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 ++ E ++++ N AA++L + L ++ EI + Sbjct: 385 LILDREGKVLFVNPAAEILFGRPKKDLMGQ-------------ILGLPIIVNNYSEIEIL 431 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q + R V E E F T A + ++ T Sbjct: 432 QPTGKMVIARIRQVKILWEEKE---AFLASLVDVTDLKGAQKQLKILKQ---------AT 479 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL- 196 +P+ +I +G I N GY + + K+ + G+ ++ Sbjct: 480 EQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNPR-LLKSGKISQDQYKQLWRTL 538 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G F ++ +G PI+ + I DIT +K + L + A Sbjct: 539 TSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITRRKAQDRILAYQA 598 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+TGL NR + +Q Q +++ ID DRFK++ND GH GD +L Sbjct: 599 NYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQ 658 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISGLPRF 370 +A L+ C RK D V R GG+EF++++P +A+ I S+ K + Sbjct: 659 VAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFI 718 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG+ + + ++ L + D A+Y K GRN Sbjct: 719 SASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRN 754 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 72/253 (28%), Gaps = 27/253 (10%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 D ++ ++ + ++ + L+ + V + + Sbjct: 252 EIQALFDAFPDILFRIND-QGIILDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIGNQLYE 310 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 +Q +LT Q E +L+ R + I A + Sbjct: 311 GIQQV-----LLTRQPLSLEYSLNIEDKKRFFEARIVQLNQTEIIAVIRDISARKHTELA 365 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 R+ + + ++ P L+ R+G+++ N AA +G + + + ++ Sbjct: 366 LRESEERLSTII--STNPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQILGLPIIVN 423 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 G + I + L + D+T+ K Sbjct: 424 NYS-----------------EIEILQPTGKMVIARIRQVKILWEEKEAFLASLVDVTDLK 466 Query: 244 RLEEQLE--HAAH 254 ++QL+ A Sbjct: 467 GAQKQLKILKQAT 479 >UniRef50_C5V180 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V180_9PROT Length = 578 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 159/425 (37%), Gaps = 37/425 (8%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 L S + + + Y N + Q + ++S + L Sbjct: 149 FALDQSAIVAFTDIRGTITYVNDLFCSISQYSREELIGKNHRIINSGTHPKDFFKTLYCA 208 Query: 69 HDIIEIL---TVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKASRSANYQ 124 + R ++ + + L E + + I A T + Sbjct: 209 ITHGRVWSGDICNRAKDGSLYWVSTTIVPFLDERGKPVQYCAIRADIT-------ARKLI 261 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 A F T+ ++ + I+ N A GY E + K+ GR Sbjct: 262 EDNLRIAAATFETH---DAIVITDANANIIKVNKAFTTISGYQPEEVLGKNPRM-MSSGR 317 Query: 185 RVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 + L G K DG + K+ + I DIT Sbjct: 318 HDKAFFESLFDKVLHDGSWVGEIWDKRKDGEIYPRWMTITAVRDAEQKISQFVGIFSDIT 377 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+K+ EE + A++D +T L NRR + A +++ +D DRFK +ND Sbjct: 378 ERKKNEELINKMAYYDPLTQLPNRRMLTDRLGRAMAANYRHAIYGAVMFVDLDRFKPLND 437 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAET 354 +GH GD +L + R + SC R+ D V R+GG+EFV++L D A+S+AE Sbjct: 438 THGHVAGDLLLVEVGRRIGSCIREMDTVARFGGDEFVVMLSELNSDRTLSRAEAISVAEK 497 Query: 355 IRVSVAKVSISG-----------LPRFTVSIGVAHHEGNESI-DELFKRVDDALYRAKND 402 IRV +A+ + SIGV G ES +E+FKR D+A+Y+AK Sbjct: 498 IRVCLAETYFLKFKQGESLPVCVEHHCSSSIGVVLFNGQESSQEEIFKRADEAMYQAKEG 557 Query: 403 GRNRV 407 GRN V Sbjct: 558 GRNSV 562 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 51/156 (32%), Gaps = 11/156 (7%) Query: 111 ATLGLKASRSANYQRKKQ-GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 L + S + + F + + + + G I N + Y+ E Sbjct: 124 IKLVDELKISLEKSVRSEIELAQHKFALDQSAI-VAFTDIRGTITYVNDLFCSISQYSRE 182 Query: 170 TMCQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 + K+ IN G + + G + ++ DGS V T P Sbjct: 183 ELIGKNHRIINS-GTHPKDFFKTLYCAITHGRVWSGDICNRAKDGSLYWVSTTIVPFLDE 241 Query: 228 GDK--LMLCIVHDITEQKRLEEQLEHAA----HHDA 257 K I DIT +K +E+ L AA HDA Sbjct: 242 RGKPVQYCAIRADITARKLIEDNLRIAAATFETHDA 277 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 21/400 (5%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL----PKYLSDLQNQHDIIE 73 +++ +++ AN A ++ ++ ++ L D + Sbjct: 157 VLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQ 216 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 + ++ + +L + E + + P T+ + + + + A Sbjct: 217 LTKRYIAKDGRIIWAKLTCTVMREADG-------QQPFTVTVVEDITERKRLEDNMRLAA 269 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 ++ L + +I+ N A G+ + + ++ + GR ++ Sbjct: 270 TV-FENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPR-LLASGRHDHDFFIQL 327 Query: 194 S--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL 249 L G + DG + K+ + ++ DIT +K++EE+L Sbjct: 328 WTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAVISDITTRKQVEERL 387 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 +AA+HD +T L NR F + +LL ID DRFK +ND GH GD Sbjct: 388 SYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDM 447 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISG 366 +L +A L SC R+GD V R G+EF ++L A + + + + G Sbjct: 448 LLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGG 507 Query: 367 LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 + SIGV+ + + L K D A+YRAK+ GRN Sbjct: 508 EAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRAKHLGRN 547 Score = 97.5 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 13/169 (7%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 + ++ S +A+ ++ +G + F +A + ++ G++V+AN A L+ GY Sbjct: 121 VRRAIFYAIERSHAASALKRSEGRFRALF--ANAGLGVVLADAHGRMVEANPAFLSMVGY 178 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPI 224 + + +I + L G + DG + + Sbjct: 179 GEVELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVM 238 Query: 225 EIYGDK--LMLCIVHDITEQKRLEEQLEHAAHH-----DAM--TGLLNR 264 + + +V DITE+KRLE+ + AA D + T NR Sbjct: 239 READGQQPFTVTVVEDITERKRLEDNMRLAATVFENSGDGLFVTDAENR 287 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 81/398 (20%), Positives = 141/398 (35%), Gaps = 20/398 (5%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLR---TGPYSVSSQKELPKYLSDLQNQHDIIEIL 75 + + + N + L + +S + L DL+ + I Sbjct: 845 LKDAAGRYEFINMRFEELFGLSAEEVIGKTDQQLFSRDIAQLLRS--RDLEVMGQLSAIQ 902 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 + EE V + P+ G+ ++ ++ A+ F Sbjct: 903 HL----EEMVFPTSKVWLD-SVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAKVF 957 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + A + G I+ N + GY+H+ + K+ + G+ + Sbjct: 958 --DRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQS-GKHGKDFYDAMWR 1014 Query: 196 --LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 + G ++ +G + + + I DI+ K + ++E Sbjct: 1015 SLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAIKSSQRRIEF 1074 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A HD +TG+ NR + Q ++L ID D FK IND GH GD++L Sbjct: 1075 LATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVGDQLL 1134 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL--PR 369 L+ C R D + R GG+EFV +L L+ S+A I + Sbjct: 1135 KQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFSINDKSLF 1194 Query: 370 FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + SIG++ + L K D A+YRAK GRN+ Sbjct: 1195 VSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQ 1232 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/248 (10%), Positives = 72/248 (29%), Gaps = 10/248 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 + + P+ + P ++ A ++ +G + + +LP +L ++ Sbjct: 715 VYNTIDFPIMVFDPE----LFLKRANGAAVRTYDLPLSASGMHIG--RLKLPAFLDNIDK 768 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 + + T + + + + R+ Sbjct: 769 SLTAALTEQRKESFQITFGKRTFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQEQIRES 828 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 Q +++ + L G+ N+ +G + E + K ++ + Sbjct: 829 QERLLSIMNHSTSAVSL--KDAAGRYEFINMRFEELFGLSAEEVIGKTDQQLFSRDIAQL 886 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRL 245 ++ + + + S + + PI + + D+T + Sbjct: 887 LRSRDLEVMGQLSAIQHLEEMVFPTSKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHA 946 Query: 246 EEQLEHAA 253 EEQL AA Sbjct: 947 EEQLRLAA 954 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 88/416 (21%), Positives = 155/416 (37%), Gaps = 26/416 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 T D + V+ + +L+ N ++ + + + + + Sbjct: 161 KFRVTFDQAPVGIAHVN-ADGRLLLINRRLCEMLGFQERELIESSFPDLCVPENRDVHER 219 Query: 64 DLQNQHDI------IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 +L+ + EI V + L K F I T Sbjct: 220 ELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMK-DAAGVPKYFIHIVEDITERKNF 278 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + A F ++ +++ D + I+ N A GY + K+ Sbjct: 279 EDNLR-------LSATVFEGSTEAIIITDARAN--ILRVNSAFTAMTGYADHEVVGKNPR 329 Query: 178 EINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 + G + G ++ +G + DK+ + Sbjct: 330 -LLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYV 388 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 I DIT +K EE+L + A HDA+TGL NR +F+ + ++++L +D D Sbjct: 389 GISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLD 448 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 RFK IND GH+ GD +L + + L R+ D + RWGG+EF++LL + A A Sbjct: 449 RFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAA 508 Query: 353 ETIRVSVAKVS--ISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I +A+ + SIG++ + E + L + D A+YRAK+ G+N Sbjct: 509 RRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKN 564 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 6/171 (3%) Query: 88 CRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDP 147 V + + E E + A + R+ + + F + AP+ + Sbjct: 119 VDFVTKPINEVELFMRIHSALALYRERVIRHHKTRELRESEEKFRVTF--DQAPVGIAHV 176 Query: 148 SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG--HKPLNF 205 + DG+++ N G+ + + ++ + R + + G + Sbjct: 177 NADGRLLLINRRLCEMLGFQERELIESSFPDLCVPENRDVHERELKKSVEQGLEYHGFEI 236 Query: 206 VHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAH 254 DG + P++ K + IV DITE+K E+ L +A Sbjct: 237 PLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDITERKNFEDNLRLSAT 287 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 16/393 (4%) Query: 25 QLIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPKYLSDLQNQHDIIEILTVQRKE 81 +++Y N+ + + L P + + + + L + + + + ++ Sbjct: 39 RIVYVNAGFEQMTGYAADEVLGETPRLLQGPRTSRVILDRLRAALSAGETFDGEVINYRK 98 Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF-FLTNSA 140 + + R + + E T + + +R + + Sbjct: 99 DGSTYVVRSYI-------SPVYAEEAPERVTHYVSLQQDVTDERARDEQLRLLSTAVEVS 151 Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PG 198 ++ +G I N A GY+ + ++ GR+ + G Sbjct: 152 GDPVLITDPEGTITYVNAAFEELMGYSRSEVLGENPRRFKS-GRQDDAFYQGMWRALERG 210 Query: 199 GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHD 256 F+++ DGS H++ P+ K+ + + D+T++ R+E+++ AH D Sbjct: 211 ESFRGEFLNRRRDGSLIHLEQTITPVLDDHGKISHYVALGKDVTDRLRMEDEIRRVAHTD 270 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 +TG+ NR + E + + SL++ D D FK +ND YGH GDEVL ALA+ Sbjct: 271 WLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHFKAVNDQYGHEAGDEVLKALAQ 330 Query: 317 TLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGV 376 T+ + R D + RWGGEEF++++P T L A +LAE +R +V+ +S+ G+P T S GV Sbjct: 331 TVSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKLRQAVSTMSVPGVPGVTASFGV 390 Query: 377 AHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 A +S L +R D+A+Y+AK GR+RV+A Sbjct: 391 AELASGDSAKLLARRADEAMYQAKQAGRDRVVA 423 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 7/136 (5%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDG--QIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 +K + +L+ D D +IV N GY + + + + Sbjct: 11 EKLRLLDAAIDQSRHSVLITDADLDDGPRIVYVNAGFEQMTGYAADEVLGETPRLLQGPR 70 Query: 184 RRVMPIMHEISHLP-GGHKPLNFVHKLADGSTRHVQTYAGPIEIYG----DKLMLCIVHD 238 + + + L G ++ DGST V++Y P+ + + D Sbjct: 71 TSRVILDRLRAALSAGETFDGEVINYRKDGSTYVVRSYISPVYAEEAPERVTHYVSLQQD 130 Query: 239 ITEQKRLEEQLEHAAH 254 +T+++ +EQL + Sbjct: 131 VTDERARDEQLRLLST 146 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 5/120 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL-- 65 +++ PV I P E + Y N+A + LM L P S ++ + + Sbjct: 147 AVEVSGDPVLITDP-EGTITYVNAAFEELMGYSRSEVLGENPRRFKSGRQDDAFYQGMWR 205 Query: 66 -QNQHDIIEILTVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKASRSANY 123 + + + R+ + + + + L + + + + T L+ Sbjct: 206 ALERGESFRGEFLNRRRDGSLIHLEQTITPVLDDHGKISHYVALGKDVTDRLRMEDEIRR 265 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 91/421 (21%), Positives = 170/421 (40%), Gaps = 27/421 (6%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY 61 + D+L V IV+ ++ N + + ++ ++ L G Y +Y Sbjct: 211 LEKWKKLFDILPIGVSIVNSKNG-IVDFNPSLEAILG-ISKEGLLQGDYDNW------EY 262 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLG----LKA 117 L D E +++ +E+ + +V+ E+ +I AP + + Sbjct: 263 LRTDNTHMDADEFPSLRAIKEQRVVK-DVVIGVKKESGDIIWTSVSAAPLSYDSNSCVTV 321 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + +++ + ++ + ++ N A GY ++ ++ Sbjct: 322 TTDITKRKQFESELRVSATAFETQEGILITDENNVMLRTNAAFTAITGYTNKEAIGQNPR 381 Query: 178 EINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 + GR+ + G ++ +G ++ + + Sbjct: 382 -LLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYV 440 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 ++ D+T++K EE++E+ A D +T L NRR + + ++L ID D Sbjct: 441 GVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLD 500 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDT 347 FK +ND YGH GD +L +A+ L S R GD V R+GG+EFV+LL Sbjct: 501 NFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQ 560 Query: 348 ALSLAETIRVSVAKVSISGLP--RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGR 404 A ++ E I ++ + + G T SIG +SIDEL K+ D A+Y+AK +GR Sbjct: 561 AETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGR 620 Query: 405 N 405 N Sbjct: 621 N 621 Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 77/261 (29%), Gaps = 21/261 (8%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLT--FSQLRTGPYSVSSQKELPKYLSDL 65 L+ VW +P ++ ++ +++ F + + + + LS + Sbjct: 87 ALEGAGDGVWDWNPQTDEAFFSKRWNEII-GYTEHEFPATGSAWVAHLHPDDKDRVLSVI 145 Query: 66 QN------QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 Q + +E + + R +L + G + T Sbjct: 146 QGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRDVYGKPLRMIGTHSDITQRKV--- 202 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ------ 173 K + + F P+ + + IVD N + G + E + Q Sbjct: 203 DEELVLKNLEKWKKLFDI--LPIGVSIVNSKNGIVDFNPSLEAILGISKEGLLQGDYDNW 260 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 ++ N K + K G A P+ + + Sbjct: 261 EYLRTDNTHMDADEFPSLRAIKEQRVVKDVVIGVKKESGDIIWTSVSAAPLSYDSNS-CV 319 Query: 234 CIVHDITEQKRLEEQLEHAAH 254 + DIT++K+ E +L +A Sbjct: 320 TVTTDITKRKQFESELRVSAT 340 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 85/419 (20%), Positives = 150/419 (35%), Gaps = 29/419 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 + + +W + Y ++ + + L P +++ + Sbjct: 457 RDVSEASGEYLWEIDI-NLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPEDIDMAARIV 515 Query: 66 Q---NQHDIIEILTVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKASRSA 121 +++ ++ L + + ++ G T Sbjct: 516 NLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITG-------- 567 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ K+ ++ G I+ N A GY+ E + ++ I Sbjct: 568 --RKLKEEQLRVAAAAFETHEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPR-ILS 624 Query: 182 LGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVH 237 GR + G K G + K + I Sbjct: 625 AGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFS 684 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT++K EE++ + A +DA+T L NRR + ++L +D DRFK Sbjct: 685 DITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKT 744 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL------DTALSL 351 +ND GH GD +L +A ++ C R+ D V R GG+EFV+L+ ++ Sbjct: 745 LNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAI 804 Query: 352 AETIRVSVAKVSI--SGLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 AE IR +++ + SIGV + G ES D+L K D A+Y+AK+ GRN V Sbjct: 805 AEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAV 863 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 4/251 (1%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPK 60 N +D L V ++ +++ N A L+ L + ++ Sbjct: 202 QARNLIDKLQVGV-LLQSARAEILLCNQIALDLLGLSEAQLLGKSSFDPDWNVIHEDGSP 260 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + I ++ R + Sbjct: 261 FPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLVSAAPQLNPNNEVEQVVCTFVDI 320 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++ ++ F ++ AP ++ + +I AN AAL+ +G++ E + +++ Sbjct: 321 TERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTIHDLD 380 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + H G + H+ DGS ++ A ++ + + DIT Sbjct: 381 PDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFVKFGDKEYNIAYHRDIT 440 Query: 241 EQKRLEEQLEH 251 E+K+ E L + Sbjct: 441 ERKKSEAALRY 451 Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 88/258 (34%), Gaps = 22/258 (8%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ-- 66 + + VW+ +P + + N + ++ + + Y S+++ + + Sbjct: 80 FNTIKDLVWLKAP-DGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFREHDRAA 138 Query: 67 ---NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 I E + L +T +I GI T + R+ Sbjct: 139 MNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDIT---ERKRAEAA 195 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN--- 180 + + +LL + I+ N AL+ G + + K +++ + Sbjct: 196 LKNSEQQARNLIDKLQVGVLLQSARAE--ILLCNQIALDLLGLSEAQLLGKSSFDPDWNV 253 Query: 181 ------MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--M 232 P+ I+ H + V++ + + A P +++ + Sbjct: 254 IHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLVSAAPQLNPNNEVEQV 313 Query: 233 LCIVHDITEQKRLEEQLE 250 +C DITE+K++EE+LE Sbjct: 314 VCTFVDITERKKMEERLE 331 Score = 89.8 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 72/243 (29%), Gaps = 15/243 (6%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS---DLQNQHDI-IE 73 + + ++ YAN AA L + + +L+ +LQ++ I IE Sbjct: 345 LWVNEQARICYANEAALHCHGFSKEELLSMTIHDLDPDFPPDVWLAHWHELQHKGGITIE 404 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 +R + K + E I + + +S R + Sbjct: 405 TRHRRRDGSIFPIEVSANFVKFGDKEYNIAYH------RDITERKKSEAALRYSEQRLRD 458 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR-RVMPIMHE 192 + ++ L + + + ++ GY E + E + + Sbjct: 459 V--SEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPEDIDMAARIVN 516 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEEQLE 250 ++ L G+ + P L+ +IT +K EEQL Sbjct: 517 LAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLR 576 Query: 251 HAA 253 AA Sbjct: 577 VAA 579 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 9/133 (6%) Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + F N+ L+ + DG + N G + + ++ + Sbjct: 73 EARLRTLF--NTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADS 130 Query: 188 PIMHEISHLPGGHK-PLNFVHKLAD-GSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQK 243 H+ + + G D G +T P+ +L+ I DITE+K Sbjct: 131 FREHDRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERK 190 Query: 244 RLEEQL---EHAA 253 R E L E A Sbjct: 191 RAEAALKNSEQQA 203 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 16/316 (5%) Query: 103 IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 + + L ++ F ++ + +++ G IV+ N A Sbjct: 146 VLAHLAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMI--TDAKGNIVEVNPAFTR 203 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTY 220 GY E + ++ + GR E+ L GH + +G Sbjct: 204 ITGYQSEEVQGRNPH-LLASGRHDHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMN 262 Query: 221 AGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 P+ L + I D+T++K E Q+ A +D +T L NRR + Sbjct: 263 INPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVG 322 Query: 279 LAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVL 338 ++L +D D FK +ND GH GD++L +A+ L SC R GD V R GG+EFV+ Sbjct: 323 ARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVV 382 Query: 339 LL------PRTPLDTALSLAETIRVSVAKVSIS--GLPRFTVSIGVAHHEGN-ESIDELF 389 +L P A +AE IR ++++ + R T SIGV G+ +S++E+ Sbjct: 383 VLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVL 442 Query: 390 KRVDDALYRAKNDGRN 405 K D A+Y+AK GRN Sbjct: 443 KFADTAMYQAKTAGRN 458 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 48/163 (29%), Gaps = 24/163 (14%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD--- 64 + S V I ++ N A + + P+ ++S + + + Sbjct: 177 VFESSYSGVMITDAK-GNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWD 235 Query: 65 --LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 L N H EI ++ E + + + ++ + GI + T +A + Sbjct: 236 DILANGHWEGEIWDRRKNGEVYPSWMNINPVR-DISGNLLYYVGIFSDVTKRKEAEAQIH 294 Query: 123 Y------------QRKKQGFYARFFLT-----NSAPMLLIDPS 148 +R + F + +L +D Sbjct: 295 QLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLD 337 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 91/416 (21%), Positives = 157/416 (37%), Gaps = 31/416 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG-PYSVSSQKELPKYL---- 62 + + +V +L+ N A +++ T + R + ++ +L Sbjct: 340 IFETEPECIKVVD-RNGELVEMNQAGLAMLEAATLEEARQKKLIDYVAPEDQAAFLALHR 398 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 + + ++E K L + + GI T + Sbjct: 399 RVMNGESAVLEFKITGLKGTLHHLETHATPMP-DANGNISLLLGITRDVTASMH------ 451 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +++ A F + ++ G I+ N A GY + + K+ +N Sbjct: 452 -AKQQLRIAATAFESQ---EGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNPRILNS- 506 Query: 183 GRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 GR E+ G ++ +G ++ G + + + D Sbjct: 507 GRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVATLMD 566 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT K EE++ + A D +T L NRR + + ++L ID D FK++ Sbjct: 567 ITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKNL 626 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLA 352 ND GH GD +L +A L SC R+GD V R GG+EFV++L + S+ Sbjct: 627 NDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAAEQTESVG 686 Query: 353 ETIRVSVAKVSISGLPRF--TVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 I S+ G+ + + SIG + SIDEL K+ D A+Y+AK GRN Sbjct: 687 SKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRN 742 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 5/196 (2%) Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 LS+ + I+ R + A + +L + + + ++ Sbjct: 268 LSETALLKPVDAIIHKNRWQAGIATALLWLLTLGAILLLQRLSSQQKLIVRHAQRLQATS 327 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY-GYNHETMCQKHTWEIN 180 N ++ + F T P + R+G++V+ N A L E QK + Sbjct: 328 NDLQESEKRLRTIFETE--PECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKKLIDYV 385 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 + + + G L F G+ H++T+A P+ + +L I D Sbjct: 386 APEDQAAFLALHRRVMNGESAVLEFKITGLKGTLHHLETHATPMPDANGNISLLLGITRD 445 Query: 239 ITEQKRLEEQLEHAAH 254 +T ++QL AA Sbjct: 446 VTASMHAKQQLRIAAT 461 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 90/402 (22%), Positives = 160/402 (39%), Gaps = 22/402 (5%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL--PKYLSDLQNQHDIIEILTVQRKEEE 83 L+ N + + + Q + + + + + EI + ++ + Sbjct: 28 LVITNKFPDVTLLQASNGQEGLALFKKHAPDIVLTDMQMPVMDGITMAKEIKQLNKEAKI 87 Query: 84 TALSCRLVLRKLTETEP---------VIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 +S + + I + A + + + R+++ F + Sbjct: 88 IVISAHNDTGHIIDAIDIGINHYVLKPINHNKLRAVIGQCMTSIKWERQIREQEKFIRKL 147 Query: 135 -FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 +P+ +I G I N GY K I G ++ Sbjct: 148 SRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPH-ILKSGETPPEEYRKL 206 Query: 194 SHLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQL 249 + GG F ++ +G PI +++ + DITE+K+ EE + Sbjct: 207 WEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDITERKQAEETI 266 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 + A++D +TGL NR F + Q + ++L +D DRFKHIND GH+ GD+ Sbjct: 267 KQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQ 326 Query: 310 VLCALARTLESCARKG-DLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGL 367 +L A A L+ C R+ D V R GG+EF++LLP + A+ +A+ I + +V + Sbjct: 327 LLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPD 386 Query: 368 PRFTVS--IGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 +S IG++ + L K D A+YRAK GR+R Sbjct: 387 IELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSR 428 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 159/408 (38%), Gaps = 17/408 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++ + + +V+ + ++ NSA +L++ + ++ L+ Sbjct: 123 QYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPEDREATLA 182 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 ++ + L + + S R++ E + + + A R Sbjct: 183 EMGKLSQGMYTLYFENRYRHRDGSYRVIAWSAATAERESVICAVGRDISQEHAARRG--- 239 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + ++ ++ +DG+I D N A GY+ E + + G Sbjct: 240 ------LFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQ-PTSLLRSG 292 Query: 184 RRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 R ++ G ++ G+ I+ + I DI++ Sbjct: 293 RHDGDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG-GFMAIFTDISQ 351 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 K EEQL+ AH+D +T L NR E + + ++ +D D FK+IND Sbjct: 352 LKETEEQLQKLAHYDPLTNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDS 411 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVA 360 GH GD++L A L++ R D V R GG+EF+++L D A +AE I ++ Sbjct: 412 LGHFAGDKLLKTTANRLKALLRDDDSVGRIGGDEFLMVLDDISTPDDATHIAEKIIGALR 471 Query: 361 KVSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 K I + SIG++ + ++ + L D A+Y AK+ GR+ Sbjct: 472 KPMILEGRSISVSASIGISIYPEDGQTAETLMSNADAAMYNAKDQGRD 519 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 73/413 (17%), Positives = 140/413 (33%), Gaps = 22/413 (5%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 + ++ P + +++ AN+ A S R ++ P Sbjct: 359 LRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKIEDINVPGREPLRF 418 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 +Q + R + + +++ R Sbjct: 419 EMVQARKPDT-FRCCHRLAGGQLRDVEVASSPIEIAGRKLLY-----------SIVRDVT 466 Query: 123 YQRKKQGFYARFFLTN-SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +++ + + + ++ ++ G I N A GY + + + Sbjct: 467 ERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTITGYLAAEVIGRKSSMF-K 525 Query: 182 LGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 R + + G + +DG + ++ + + Sbjct: 526 PERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGRIAEYVTLFS 585 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE+K+ E + A+ D +TGL NR + LL +D D FK Sbjct: 586 DITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKW 645 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIR 356 IND GH GDE+L +AR L SC R D V R GG+EF +++ ++A+ + Sbjct: 646 INDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIADKLV 705 Query: 357 VSVAKVSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + + + S+G+ + + L + D A+Y+AK G+NR Sbjct: 706 AVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNR 758 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 11/157 (7%) Query: 104 FEGIEAPATLGLKASRSANYQRKK------QGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + + A + ++A + + + Q +P ++ R G I N Sbjct: 75 LQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVITDRSGTIEYVN 134 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTR 215 GY + + K+ I G R + G F + DG+ Sbjct: 135 PQFERSTGYTAQEVVGKNPR-ILKSGNRSADEYAAMWATITHGHVWRGEFENVRKDGAHY 193 Query: 216 HVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + PI + + + DIT QKR E +L Sbjct: 194 WERASIAPIRADDGMISGFVAVKEDITLQKRAERELR 230 Score = 97.1 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 11/252 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFE--EQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK 60 + L +++V + + L + + + +L + Sbjct: 234 MKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVKLDE 293 Query: 61 YLSDLQNQHDIIEIL-TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 L ++ ++ T+ S + ++ EG + R Sbjct: 294 ALEEISATGGAKQVEYTLDLPRGRHHFSASVSRL----AGSGLVPEGFIVLVRDLTERVR 349 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + Y F + ML+IDP DG+IV+AN A +YGY+ ++ + +I Sbjct: 350 MEQALIESELRYRELFANSRVVMLVIDP-VDGRIVEANAKACEYYGYDPVSLTRMKIEDI 408 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 N+ GR + + P H+LA G R V+ + PIEI G KL+ IV D+ Sbjct: 409 NVPGREPLRFEMVQARKPD---TFRCCHRLAGGQLRDVEVASSPIEIAGRKLLYSIVRDV 465 Query: 240 TEQKRLEEQLEH 251 TE+KR EE++ Sbjct: 466 TERKRFEERMRQ 477 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 10/308 (3%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + + + + + ++ A+ F +S ++L+DP+ IV N A + Sbjct: 470 QRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIMLLDPNCH--IVMVNSAFTHIT 527 Query: 165 GYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAG 222 GY+ E ++ + G+ + G ++ DGS Sbjct: 528 GYSEEETLGRNPKML-ASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQ 586 Query: 223 PIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA 280 + + D+TE+K EE+++ AH D +TGL NR + + Sbjct: 587 TMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQR 646 Query: 281 IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL 340 + +L+ +D D FK++ND GH GDE+L ++ L + R+ D + R GG+EFVL+L Sbjct: 647 RHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVL 706 Query: 341 PRTPLDTALSLAETIRVSVAKVSIS--GLPRFTVSIGVAHHE-GNESIDELFKRVDDALY 397 P T D A LAE + A+ TVSIG+A + D L++ D A+Y Sbjct: 707 PGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMY 766 Query: 398 RAKNDGRN 405 RAK GRN Sbjct: 767 RAKQSGRN 774 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 6/117 (5%) Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW--EINMLGRRVMPIMHEISHLPGG 199 M ++ S D + + N +GY E K W + + + Sbjct: 1 MGILSVSLD-KWIHFNDKLCEIFGYTPEEF-GKKGWNELCDTPCAEENRGIESLKRGDID 58 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAH 254 + +G + + + ++ V DITE+K+ + ++ + Sbjct: 59 EFREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQ 115 >UniRef50_Q0EX85 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX85_9PROT Length = 437 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 82/417 (19%), Positives = 150/417 (35%), Gaps = 25/417 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELP---K 60 H ++ + ++ ++ AN AA S +++Q+E + Sbjct: 29 HFRQLFEMHRDVMLLIDYQSRTIVDANPAAAQFYGYPLESLRGMSVSRINAQQESEIHHQ 88 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + + +I + + + L +L Sbjct: 89 RQKAIAGEQNIFSFDHRLANGDVRTVESHISLVS-------------YRGKSLFFSIIHD 135 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 +++ + + ++ + I+ N A GY E + + + Sbjct: 136 ITERKRVEAELRIVTAAFESQESMVITDANSVILKVNHAFTKTTGYTSEEVVGQTPS-LL 194 Query: 181 MLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIV 236 GR E+ G + +G ++ + + Sbjct: 195 KSGRHDADFYDEMWDTLKRTGKWQGEVWDRRKNGEIYPKWLTITAVKGENGVTTHYVGLH 254 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DITE+K+ EE++ + A+HD +TGL NR FY + +L++D DRFK Sbjct: 255 IDITERKQAEEKISNMAYHDHLTGLANRALFYDRLQQAGAHLQRNRNRMGMLMLDLDRFK 314 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAETI 355 IND GH GD VL ++ L C R D V R GG+EF ++L P + +AE + Sbjct: 315 LINDELGHEWGDRVLVEVSSRLMRCVRSTDTVARLGGDEFSIILLDVPSEEFVCKMAEKV 374 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + + + VSIG+ ++ ++ L K+ D A+Y+AK GRN Sbjct: 375 ITVIGQSLVLKGGHYEVGVSIGICLASSDDQDMETLVKKADAAMYQAKESGRNCYCI 431 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 2/130 (1%) Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + R+ + + + F + ++L+ + IVDAN AA FYGY E++ IN Sbjct: 20 IDALRESEAHFRQLFEMHRD-VMLLIDYQSRTIVDANPAAAQFYGYPLESLRGMSVSRIN 78 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + G +F H+LA+G R V+++ + G L I+HDIT Sbjct: 79 AQQESEIH-HQRQKAIAGEQNIFSFDHRLANGDVRTVESHISLVSYRGKSLFFSIIHDIT 137 Query: 241 EQKRLEEQLE 250 E+KR+E +L Sbjct: 138 ERKRVEAELR 147 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 90/418 (21%), Positives = 160/418 (38%), Gaps = 29/418 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL- 62 N L + + I+ P + +I A+ + ++ L + P+ + Sbjct: 457 KNMVLLRNASDGIHILDP-DGNIIEASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIVK 515 Query: 63 --SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 D + T R+++ T + + L +F SR Sbjct: 516 LFRDQFTNKGRTQFETRHRRKDGTVIDVEISGYPLQLHGKPALFNS-----------SRD 564 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++K + A ++ D I+ N A + GY+ E + K+ I Sbjct: 565 ITERKKIEVEIQIAATAFEAQEGMLITDADRNILRVNRAFTDITGYSAEEVIGKNPR-IL 623 Query: 181 MLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 G + + G +K +G + ++ + + + Sbjct: 624 SSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGVVINYVASL 683 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DIT K E+++ A D +TGL NRR + + + +LL +D D FK Sbjct: 684 SDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFK 743 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALS 350 ++ND GH GD +L +A+ L++C R+GD V R GG+EFV++L + + Sbjct: 744 NLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAASQTEA 803 Query: 351 LAETIRVSVAKVSISG--LPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 + I ++ K T SIG + + ID+LFK+ D A+Y+AK GRN Sbjct: 804 VGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRN 861 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 56/155 (36%), Gaps = 6/155 (3%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLA 159 ++ + +++ +R+ + + +S+ +I + I+ N A Sbjct: 299 PVLLAISLLAMAFYRRLAQNEAQRREAERLQRINATVFDSSAEAIIITDLNANIISVNPA 358 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHV 217 GY+ E + K+ I G++ E+ L V++ +GS ++ Sbjct: 359 FTQITGYSPEDVLGKNPR-ILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNGSLYNI 417 Query: 218 QTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 + + + DITE+K+ E +L Sbjct: 418 HLSISASRDGTGQLQHFIGVTTDITERKQHESELR 452 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 13/253 (5%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL-- 65 D + I++ +I N A + L P +SS ++ + +L Sbjct: 335 VFDSSAEAI-IITDLNANIISVNPAFTQITGYSPEDVLGKNPRILSSGQQSKGFYRELWE 393 Query: 66 -QNQHDIIEILTVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKASRSANY 123 + + + V R + + + L + T + F G+ T + Sbjct: 394 ALLRDNFWQGELVNRHKNGSLYNIHLSISASRDGTGQLQHFIGVTTDITERKQHESELRM 453 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT--WEINM 181 + +K R +A + DG I++A+ + + GY M + W+ + Sbjct: 454 ESEKNMVLLR-----NASDGIHILDPDGNIIEASDSFCSMLGYQRNEMLGMNVCQWDADF 508 Query: 182 LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 R++ + + G H+ DG+ V+ P++++G + DITE Sbjct: 509 SDPRIVKLFRD-QFTNKGRTQFETRHRRKDGTVIDVEISGYPLQLHGKPALFNSSRDITE 567 Query: 242 QKRLEEQLEHAAH 254 +K++E +++ AA Sbjct: 568 RKKIEVEIQIAAT 580 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 23/423 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + + +W + + ++ L P +++ +L Sbjct: 636 RFRDVSAAVGEYIWETDGRD-TFTFVTEDVFSILGYTQEEMLGQTPALFVAREHTEDFLR 694 Query: 64 ------DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 LQ+ +E+ + R L V + + G + T Sbjct: 695 WRADLYRLQSPFSKVELRCLTRDGRAIWLQSSGVP-HFDDEGGFRGYRGADMDIT---DR 750 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + N + + SA ++ G N AA +GY E + + Sbjct: 751 KDAENAIKASERKLRAL--AESAYDAIVMIDMHGNASFWNRAAERLFGYTEEEVMGRPIH 808 Query: 178 EINMLGRRVMPIMHEISHLPGGH------KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 E+ M + G DG+ V+ ++ G Sbjct: 809 ELITPPELRDEAMAGMRQFAGSGDGDAVGAIQETEALRKDGTRVSVERSVSSFQLGGRWY 868 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + + DITE+K E +L A D++TGL NRR+F + E M+ ++L++D Sbjct: 869 AVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMD 928 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSL 351 D FK +ND +GH GDEVL LAR + R+ D++ R GGEEF +LLP T A+ + Sbjct: 929 IDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEV 988 Query: 352 AETIRVSVAKVSI---SGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRV 407 A+ +R ++ K S+ +G R TVSIG A + E+++ L KR D ALY AK GRN+V Sbjct: 989 AQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKV 1048 Query: 408 LAA 410 +A Sbjct: 1049 VAG 1051 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 6/142 (4%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + ++ R ++ ++ SA ++ ++ N AA GY + + + Sbjct: 370 RVRQAEVEARLRESEERTLAISQSAQDGIVMIDDQDRVTYWNPAAERLLGYTAQEIMGRR 429 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHK------PLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + + + ++ + + D S V+ +++ G Sbjct: 430 LHPLLVPEPQQDKAESGLAGFAASGRGAVVGQVIELEAVRKDSSIVPVELAVSSVKLKGR 489 Query: 230 KLMLCIVHDITEQKRLEEQLEH 251 + + D+T +KR E L Sbjct: 490 WYAVGTLRDMTRRKRYEAALRR 511 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 72/239 (30%), Gaps = 10/239 (4%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV-SSQKELPKYLSDLQNQHDIIEILT 76 ++ ++++ Y N AA+ L+ + + + + + K S L Sbjct: 399 VMIDDQDRVTYWNPAAERLLGYTAQEIMGRRLHPLLVPEPQQDKAESGLAGFAASGRGAV 458 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP---ATLGLKASRSANYQRKKQGFYAR 133 V + E A+ + + + +G + R R+ + Sbjct: 459 VGQVIELEAVRKDSSIVPVELAVSSVKLKGRWYAVGTLRDMTRRKRYEAALRRSEQTSRT 518 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM-PIMHE 192 N+ L + +G+I N Y E M + ++ RR + Sbjct: 519 LL--NAPEDLAMLIEPNGRIAAINETGARIYERTPEDMIGRSLFDFLSDKRREALRTILS 576 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 G H DG H Y + M D+TEQ++ + L+ Sbjct: 577 QVMEQAGPVRFEGEH---DGRRFHASAYPVTGPDGAVEQMAVFARDVTEQRKAQAALKR 632 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 73/268 (27%), Gaps = 21/268 (7%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 TL + ++ ++ N + + + + S K L Sbjct: 514 QTSRTLLNAPEDLAMLIEPNGRIAAINETGARIYERTPEDMIGRSLFDFLSDKRREA-LR 572 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + +Q + + V+ + E +T P E + A + ++ Sbjct: 573 TILSQV-MEQAGPVRFEGEHDGRRFHASAYPVT--GPDGAVEQMAVFARDVTEQRKAQAA 629 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 ++ + + + + + + + GY E M + + + Sbjct: 630 LKRSEQRFRDV--SAAVGEYIWETDGRDTFTFVTEDVFSILGYTQEEMLGQTPA-LFVAR 686 Query: 184 RRVMPIMHEISHLPGGHKPL---NFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHD 238 + + L P DG +Q+ P + D Sbjct: 687 EHTEDFLRWRADLYRLQSPFSKVELRCLTRDGRAIWLQSSGVPHFDDEGGFRGYRGADMD 746 Query: 239 ITEQ-------KRLEEQLEHAAH--HDA 257 IT++ K E +L A +DA Sbjct: 747 ITDRKDAENAIKASERKLRALAESAYDA 774 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 85/421 (20%), Positives = 147/421 (34%), Gaps = 23/421 (5%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT---GPYSVSSQKEL 58 + + LD L V+ + Q + N A ++ + + + Sbjct: 352 LRERASLLDSLGEGVYGID-QNGQCTFINPKALEMLGWTADEVIGSDQHARFHHHRPDGS 410 Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 +D + + +R+ EE + + + I + + Sbjct: 411 IYPSADCPVYQTLRDGQ--RRQGEEWFFNKDGRGFPVQYSVTPI---SRQEDKEGAVVTF 465 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R + RK + ++ QI+ N A GY+ + Sbjct: 466 RDISEARKADELMRIAAIAFETQEAMLVTDAKSQILRVNRAFTEVTGYSAAEAIGQTPA- 524 Query: 179 INMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLC 234 + G ++ G ++ +G + ++ + Sbjct: 525 LLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGEITHFVS 584 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 DIT++K EEQ++ A +D +T L NRR + +LL ID D Sbjct: 585 SFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLDN 644 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TA 348 FK IND GH GD +L +A L R D V R GG+EFV+LL + Sbjct: 645 FKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEELSPNIHDATTQI 704 Query: 349 LSLAETIRVSVAKVSISGL--PRFTVSIG-VAHHEGNESIDELFKRVDDALYRAKNDGRN 405 +A+ + S+ + G T SIG + + E+I+ L K D A+Y+AK G+N Sbjct: 705 EHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKAKAAGKN 764 Query: 406 R 406 R Sbjct: 765 R 765 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 12/184 (6%) Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF-----YARFFL 136 E A RL + + + +TL + + + Y + + R L Sbjct: 299 ELRAHPDRLEHFDAQDIVDKYSTQVVGGLSTLLILSMLAVAYLIRSKRLVGAALRERASL 358 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE---- 192 +S + ++GQ N AL G+ + + R I Sbjct: 359 LDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQHARFHHHRPDGSIYPSADCP 418 Query: 193 --ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQL 249 + G + DG VQ PI + + DI+E ++ +E + Sbjct: 419 VYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISRQEDKEGAVVTFRDISEARKADELM 478 Query: 250 EHAA 253 AA Sbjct: 479 RIAA 482 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 165/412 (40%), Gaps = 25/412 (6%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQL-RTGPYSVSSQKELPKYLSDLQNQHD------ 70 I++ + + Y N AA+ ++ + R P E+ + D Sbjct: 43 ILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYSCEPDGTPPAG 102 Query: 71 ---IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 I L ++ ++E R L + V + + L + + +R+ Sbjct: 103 FGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGYLGIASDISERRRM 162 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + + + ++ + +I+ N A GY+ E + + GR+ Sbjct: 163 EHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTPGMLKS-GRQDA 221 Query: 188 PIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQK 243 + G GH ++ +G + K + DI+ K Sbjct: 222 DFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVSTFSDISNLK 281 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 E ++ H A +D +T + NRR + + + Q +LL+ID D FK +ND G Sbjct: 282 VAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLG 341 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAETIRV 357 H GD +L +AR L +C R+GD R GG+EFV++L + A +AE IR+ Sbjct: 342 HDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRL 401 Query: 358 SVAKVSI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 +A+ + + SIG++ G E +ID L K+ D ALY+AK+ GRN Sbjct: 402 ELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAGRN 453 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 19/140 (13%) Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 + + A +I + DG I N AA GY E + + T + L + Sbjct: 31 QLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARL 90 Query: 193 ISHLPGGHKP-----------------LNFVHKLADGSTRHVQTYAGPIEIYGD--KLML 233 S P G P ++ + DGS V + + L Sbjct: 91 YSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGYL 150 Query: 234 CIVHDITEQKRLEEQLEHAA 253 I DI+E++R+E L AA Sbjct: 151 GIASDISERRRMEHDLRIAA 170 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 80/414 (19%), Positives = 151/414 (36%), Gaps = 17/414 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQL---RTGPYSVSSQKELP 59 + + P++I ++ N + R Y +++ Sbjct: 159 INFAVAFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQELVGVSRQQFYFWVDEQQRQ 218 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 +L DL + R+ E +R + + + F ++ + R Sbjct: 219 SFLRDLLLWQKDGLVKFENREIE--VYDQEKQVRTMLLSGEPMEFNRVDCLLFVM----R 272 Query: 120 SANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 +RK + +P ++ G I N GY + ++ Sbjct: 273 DITERRKAEKQLKILSQACEQSPASIVITDVQGNITYVNPKFEEISGYKSAEVLGRNPRI 332 Query: 179 INMLGRRVMPI-MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCI 235 + + + + G + F ++ +G + PI + + Sbjct: 333 LKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASISPISNQQGIVTHYVAV 392 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT++K+ E L H AH+D +TGL NR + L + L+ +D D F Sbjct: 393 KEDITKEKQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIESALRQKHIFGLMFLDLDNF 452 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAET 354 K +ND GH GD++L ++ L+ R+ D V R GG+EF+++L + +++A+ Sbjct: 453 KKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIILDQVSHSRKLMAIAQR 512 Query: 355 IRVSVAKVSISGLPRFTV--SIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 + + + F V SIG+ + D L + D A+Y AK GRN Sbjct: 513 LLRVMRQPVNLQGLEFFVHGSIGITVFPDDGFHADVLLRNADTAMYAAKLAGRN 566 Score = 81.3 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%) Query: 61 YLSDLQNQHDIIE------ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLG 114 +LS L +Q I++ + + + ++ + RL L+ + + + Sbjct: 85 FLSALTDQKSIVKGLELGAVDYIHKPFQQEEIITRLQLQLKLHQTNQALLQKNQQLEEQI 144 Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ- 173 K +R+ + + +A F + P+ + + G I+D N F+G + + Sbjct: 145 EKTARTQAALMQSEINFAVAFNQSPDPIFIYGRN-SGCIMDVNQPFCQFFGLTKQELVGV 203 Query: 174 -KHTWEINMLGRRVMPIMHE--ISHLPG----GHKPLNFVHKLADGSTRHVQTYAGPIEI 226 + + + ++ + + + G ++ + + R + P+E Sbjct: 204 SRQQFYFWVDEQQRQSFLRDLLLWQKDGLVKFENREIEVYDQEK--QVRTMLLSGEPMEF 261 Query: 227 YGDKLMLCIVHDITEQKRLEEQLEHAAH 254 +L ++ DITE+++ E+QL+ + Sbjct: 262 NRVDCLLFVMRDITERRKAEKQLKILSQ 289 >UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E8F7_GEOLS Length = 461 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 154/403 (38%), Gaps = 26/403 (6%) Query: 18 IVSPFEEQLI-YANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL-QNQHDIIEIL 75 I+ +I +N A + L Y + + + + EI Sbjct: 58 IILSRNGGVICDSNERASEMSGFSRQELLERSLYCLIAPEYHTLVHRAIADGFDGPYEIE 117 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF- 134 V+ L R + T+ R +R K+ + Sbjct: 118 GVRADGSRYLLEVRGKTFQ-------------SGGHTMRASTLRDVTARRAKEAQLRKLS 164 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 +P ++ +RDG I N A GY+ + ++ + G + E+ Sbjct: 165 AAVEHSPASIVITNRDGAIEYVNPAFSRLTGYSMQEALGQNPRILKA-GDQPEEFYRELW 223 Query: 195 H--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 L G F +K DGS PI ++ + + +ITE+K L ++LE Sbjct: 224 AVLLRGEEWRGEFHNKRKDGSLFWEMASISPILNNKGEIISFVAVKENITERKELRDRLE 283 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 A D +TGL NRR F Q ++LL +D D FK IND YGH GD V Sbjct: 284 QMAQFDMLTGLPNRRMFLDRLSQTVAIAQRTEQRFALLFVDLDGFKRINDSYGHEAGDRV 343 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPR 369 L +A L +C R D V R GG+EF ++L + A +A+ I ++++ + Sbjct: 344 LKTVAARLAACIRMSDTVGRMGGDEFTIILSTLAHYEDAGQVADKILDALSRPITLPDGQ 403 Query: 370 ---FTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRVL 408 SIG++ + + D L DDA+Y+ K +G+N Sbjct: 404 QDTVGSSIGISVFPEDAQDGDGLLATADDAMYKVKRNGKNSYC 446 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 50/153 (32%), Gaps = 5/153 (3%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 V++ A + + + + + + +I G I D+N A Sbjct: 17 VVLLLVCGALLAVMIWYLHARRRLCMSEEHFRNLAEASFEG--IILSRNGGVICDSNERA 74 Query: 161 LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTY 220 G++ + + ++ + + + + G P ADGS ++ Sbjct: 75 SEMSGFSRQELLERSLYCLIAPEYHT---LVHRAIADGFDGPYEIEGVRADGSRYLLEVR 131 Query: 221 AGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 + G + + D+T ++ E QL + Sbjct: 132 GKTFQSGGHTMRASTLRDVTARRAKEAQLRKLS 164 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 81/407 (19%), Positives = 148/407 (36%), Gaps = 10/407 (2%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 + L V++ E + + N AA+ L + S+ + + Sbjct: 134 ALIQALPDAVFL-KDGEGRWLVTNGAAQALFGLAERDWFGRTDLELGSEDPARAEVHAVC 192 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 ++D + ++ + R + E + +F+ + + + + Sbjct: 193 ARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGIVVVGRDITERRAA 252 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ + ++ + RDG I N A GY + HT + GR Sbjct: 253 EERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQS-GRHG 311 Query: 187 MPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + G ++ G G + ++ + + DI++ Sbjct: 312 ADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVFSDISQI 371 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K + QLE AH+D +TGL NR + ++L +D D FK++ND Sbjct: 372 KDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSL 431 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL-SLAETIRVSVAK 361 GH GD +L +A L R V R+GG+EF ++L A+ +AE + +A+ Sbjct: 432 GHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIAR 491 Query: 362 VSISGLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG+A + L K D A+YR+K GRN Sbjct: 492 PLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRN 538 Score = 91.3 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 20/262 (7%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 N LD + +PV+ + + N+A + L + +S +Y + Sbjct: 7 QNVLDAIPAPVF-FKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPPDLAARYHAQD 65 Query: 66 QNQHD-----IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 Q D + E + E + V G T +A R Sbjct: 66 QALFDNPGEQVYEAQVQNARGERREVVFYKATFH-DTEGKVAGLVGTILDITDRKQAERR 124 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++ G + P + +G+ + N AA +G + E+ Sbjct: 125 VRESEERLGAL-----IQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELG 179 Query: 181 MLGRRVMPI------MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI--YGDKLM 232 + E+ GG + + + + G + P+ K + Sbjct: 180 SEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGI 239 Query: 233 LCIVHDITEQKRLEEQLEHAAH 254 + + DITE++ EE+L AA Sbjct: 240 VVVGRDITERRAAEERLRQAAT 261 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 92/410 (22%), Positives = 153/410 (37%), Gaps = 17/410 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 F T I E +++ N A+ + ++ P S + + Sbjct: 243 FLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQ-DEILGSPLSRLIPERYHAINAAW 301 Query: 66 QNQHDIIEILT--VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + + E L + + G + A+R + Sbjct: 302 VKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSV----AARDISK 357 Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +++ + +P ++ + +G I N GY + + K I Sbjct: 358 RKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKKPS-ILKS 416 Query: 183 GRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHD 238 GR + + G +++ DGS PI + + D Sbjct: 417 GRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYISVKED 476 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 I+ +K EE+L A++DA+TGL NR + Q + +L+L+D D FK + Sbjct: 477 ISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKV 536 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRV 357 ND GH+ GD +L A L C R+GD V R GG+EFVLLLP T +A +AE I Sbjct: 537 NDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILA 596 Query: 358 SVAKVSISGLPR--FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGR 404 + + G SIG+A +E L + D A+YR+K +G+ Sbjct: 597 ACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGK 646 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 86/252 (34%), Gaps = 20/252 (7%) Query: 15 PVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 P I+ ++YAN A+++M + T S + + DL + + Sbjct: 127 PDAILVHQGGTIVYANRQAQIMMG----APTPTDLIGRSIIEIIDPACHDLVAK----RL 178 Query: 75 LTVQRKEEETALSCRLVL-----RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 + R E+ + RLV ++ T + + G A ++ S + Q Sbjct: 179 KLLARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRDISARKQAEAASQA 238 Query: 130 FYARFFLTN-SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV-- 186 F S P LI +G+IV N A YG+ + + + Sbjct: 239 AKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLIPERYHAIN 298 Query: 187 MPIMHEISHLPGGH----KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQ 242 + ++ G H KP+ G V+ G G DI+++ Sbjct: 299 AAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAARDISKR 358 Query: 243 KRLEEQLEHAAH 254 K+ EE+L H + Sbjct: 359 KQSEEKLRHLSQ 370 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 71/242 (29%), Gaps = 9/242 (3%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK-YLSDLQNQHDI-IEILT 76 V + ++Y N+ L + P+ + D + ++ + Sbjct: 5 VFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRFRVER 64 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 ++ E T R L + G T + + R+ + + R Sbjct: 65 ARKFEAHTVERTTPDGRVLEIQGSPLPGGGFITTYTDISERRNAEVRLRESEERFRRLVE 124 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVMPIMHEISH 195 +L+ + G IV AN A G + + EI + Sbjct: 125 LAPDAILV---HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHDLVAKRLKLL 181 Query: 196 LPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 G PL DG V++ G G + M + DI+ +K+ E A Sbjct: 182 ARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRDISARKQAEAA--SQAA 239 Query: 255 HD 256 D Sbjct: 240 KD 241 Score = 42.0 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 32/119 (26%), Gaps = 14/119 (11%) Query: 142 MLLIDPSRDGQIVDANLAALNFY---------GYNHETMCQKHTWEINMLGRRVMPIMHE 192 M + D +V N L Y G ET + + + + Sbjct: 1 MGISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRF 60 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + DG ++ P+ + DI+E++ E +L Sbjct: 61 RVERARKFEAHTVERTTPDGRV--LEIQGSPLP---GGGFITTYTDISERRNAEVRLRE 114 >UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1Q2M0_9BACT Length = 1069 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 7/302 (2%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 L L+ R +R + + +P ++ ++G I N GY + + Sbjct: 511 LALQLGRLIERKRADERIRKLSQVVEQSPASILITDKEGIIEYVNPKLAELTGYTGDEII 570 Query: 173 QKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 + + G+ + + + G ++K G + PI + Sbjct: 571 GRTPRMLKS-GKTSNETYRNLWNTIISGKEWQGELLNKKKTGELYWEHVHISPIRNHKGH 629 Query: 231 L--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + L I DITE K+ E QL + A D +T L NRR+F + Q L +LL Sbjct: 630 VTNYLAIKEDITEHKKFETQLLNMATRDPLTNLFNRRRFQEELQYWIAQTLRYGATGALL 689 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 +D D FK++ND GH GDE+L LA L S R D+ R+GG+EF +LLP T + A Sbjct: 690 FLDLDNFKYVNDTLGHQAGDELLIRLAEMLRSRLRDTDIFARFGGDEFAILLPYTDREKA 749 Query: 349 LSLAETIRVSVAKVSISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 +A I + + + T SIG+ + L D A+YRAK GRNR Sbjct: 750 GLIANEILELTREHTFEHS-KVTFSIGIVIFPEHGRDAETLLVNADLAMYRAKESGRNRF 808 Query: 408 LA 409 Sbjct: 809 CV 810 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 44/117 (37%), Gaps = 3/117 (2%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 ++ L + ++ + +G + N AA +GY+ E M K+ + Sbjct: 220 EENELKFANLASVINDGIVVLNENGHVTHWNPAAEKIFGYSEEEMKGKNILNVIGGAEHT 279 Query: 187 MPIMHEISHLPGG---HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 P M +++ G ++ + + S ++ ++I ++ I DI+ Sbjct: 280 EPEMRFFNNIKAGCIINETIEITGVKKNKSEFPLEASFSTLQIGRQIHIIAIFRDIS 336 Score = 42.0 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 20/218 (9%), Positives = 51/218 (23%), Gaps = 23/218 (10%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPY-------SVSSQ 55 N ++ + +++ + + N AA+ + + Sbjct: 224 LKFANLASVINDGIVVLN-ENGHVTHWNPAAEKIFGYSEEEMKGKNILNVIGGAEHTEPE 282 Query: 56 KELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 + ++ IEI V++ + E L ++ I I + Sbjct: 283 MRFFNNIKAGCIINETIEITGVKKNKSEFPLEASFSTLQI---GRQIHIIAIFRDISERR 339 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 K ++ F T L+ + + + G+ Sbjct: 340 KKDDEKRKKQAILQLINEVFDTAHD---LLTVDSTMR-LYL-KKMCRYLGWP----VGHI 390 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS 213 I + + + + F G Sbjct: 391 CKVIYTVNGAIRLESTRLWYFENTK---EFSLLRKIGE 425 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 11/322 (3%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 +L E E + I + + A+ F +N+ +++ + Sbjct: 348 PARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMI--TDAEQ 405 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKL 209 IV N A GY + + + ++ GR H + +K Sbjct: 406 NIVMVNQAFTQITGYGADEVLGQRP-KLLSSGRHGPEFYEAFWHALRANDLWRGEIWNKR 464 Query: 210 ADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 +G + ++ + + DITE+K+ EE++ + A++D +TGL NR Sbjct: 465 KNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLL 524 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 E ++L ID D FK+IND GH GD +L +A L++C R+ D Sbjct: 525 SDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDT 584 Query: 328 VFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVSISGL--PRFTVSIGVAHHE-GNE 383 + R GG+EFV LL + + +AE + S+ + G T SIG+ + E Sbjct: 585 IARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGE 644 Query: 384 SIDELFKRVDDALYRAKNDGRN 405 + EL + D A+Y+AK+DGRN Sbjct: 645 TSVELLRNADLAMYQAKDDGRN 666 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 89/417 (21%), Positives = 153/417 (36%), Gaps = 29/417 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSS-----QKEL 58 N + + ++ S + + AN A L L T + Sbjct: 225 RYRNIFEHASEGIFQ-STRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRR 283 Query: 59 PKYLSDLQNQHDI--IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 ++L+ ++ I E +R +S I +EG + Sbjct: 284 EEFLTLIEKNGAILNFESEVYRRDGSRIWIS-ENAHVVFGPQGEFICYEGTVQDIS---- 338 Query: 117 ASRSANYQRKKQGFYAR-FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 +++ + + +++ +I +I+ N A GY + + K+ Sbjct: 339 ------ERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKN 392 Query: 176 TWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM- 232 I G + ++ G + +G + ++ Sbjct: 393 PR-ILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRN 451 Query: 233 -LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + DI+E K +E++ H AHHD +T L NR + +L+LID Sbjct: 452 HIGSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLID 511 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALS 350 DRFK IND GH GDE+L +A+ L R+ D+V R GG+EFV+ LP A Sbjct: 512 LDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAH 571 Query: 351 LAETIRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 LA+ I ++ + R + SIG+ + I +L K D A+Y AK +GR Sbjct: 572 LADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGR 628 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 66/246 (26%), Gaps = 16/246 (6%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLR------TGPYSVSSQKELPKYLSDLQNQHDII 72 + + +++ + + L + L + + + D Sbjct: 111 LHDADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAIGSGQRF 170 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 + + + + + EG ++ + Y Sbjct: 171 AVQYRIVCKSGQVKWVIERGVAIRDELDESVIEGFIEDISVRRTT---LEALEAAEQRYR 227 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI---NMLGRRVMPI 189 F S + +RDG + AN A YGY++ +I + Sbjct: 228 NIFEHASEG--IFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREE 285 Query: 190 MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEE 247 + G DGS + A + + + V DI+E+KR E Sbjct: 286 FLTLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEA 345 Query: 248 QLEHAA 253 L+ A Sbjct: 346 HLQLMA 351 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 144/376 (38%), Gaps = 17/376 (4%) Query: 38 QDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTE 97 D L + P + ++ D+ H + + + + + L L + L Sbjct: 195 GDTPIGHLASRPLLTVAANDMLIRARDMLMDHQVRHLAVLDDRGQVVGL---LGFQDLLA 251 Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + + + ++ RK R ++ ++ +I N Sbjct: 252 GAEQSYLKDLRRAL---EQRDKALAQSRKHLQLAERVIDSSLEG--IVITDAHARIEFVN 306 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTR 215 A + GY+ E + + + GR E+ G+ ++ G+ Sbjct: 307 PAFTHLTGYSLEEVAGRTPAVL-SSGRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALY 365 Query: 216 HVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP 273 I + DIT + E Q+ A++D +T L NRR Sbjct: 366 LELLTITAITNDDGDTTHYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSL 425 Query: 274 GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGG 333 Q +++ ID D FK +ND GH+ GDE+L ++ L R+ D + R GG Sbjct: 426 AIKHAHRHRQRLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGG 485 Query: 334 EEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP--RFTVSIGVAHHE-GNESIDELF 389 +EF+ LLP +D A+ + + + ++++ G R SIG++ + ES D L Sbjct: 486 DEFLALLPDLQEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALI 545 Query: 390 KRVDDALYRAKNDGRN 405 + D A+YR+K +GRN Sbjct: 546 RNADGAMYRSKTEGRN 561 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 152/411 (36%), Gaps = 20/411 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 LD T + +V+ E ++ N+AA + + + + + + Sbjct: 134 RAMLDSSTDGIVLVN-AEGTILAVNAAASAIFEKNSDDLPGKAIWDHLPDSVVAPMRRGI 192 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 D E + + L + + + + + + Sbjct: 193 DRVLDRRETVESHHAIGAKLFDVHMHLVA----------DSVGQRDRVAIFSRDVTQSHQ 242 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 ++Q AP+ ++ G I N A + GY+ + + ++ + G Sbjct: 243 RRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPR-LLKSGET 301 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITE 241 V + ++ H G ++ DGS PI + + +IT+ Sbjct: 302 VASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQ 361 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K E+QL H A HD +TGL NR + L+ +D DRFK +ND Sbjct: 362 RKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDS 421 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVA 360 GH GDE+L ++ L R+ D V R GG+EFV++L +AE I ++ Sbjct: 422 LGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALD 481 Query: 361 KVS--ISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVL 408 + SIG+A + ++ + L K D A+YRAK GRN Sbjct: 482 EPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFC 532 Score = 78.6 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 33/291 (11%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG-PYSVSSQKELPK 60 IT LD V + + +++ N + + + + + Sbjct: 7 ITDFLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQRLE 66 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + L+ +I + + + ++ L +R T + + K ++ Sbjct: 67 VVRQLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLY----DVSKRKQA 122 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + +++ ++L+ + +G I+ N AA + N + + K W+ + Sbjct: 123 EQAILDGKTLIRAMLDSSTDGIVLV--NAEGTILAVNAAASAIFEKNSDDLPGKAIWD-H 179 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + V P+ I + + + H + V + + + D+T Sbjct: 180 LPDSVVAPMRRGIDRVLDRRETVESHHAI-GAKLFDVHMHLVADSVGQRDRVAIFSRDVT 238 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + + +QL E Q S+++ D Sbjct: 239 QSHQRRQQLRK-------------------LETALEQA-----PVSVMITD 265 >UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WZ5_RHOFD Length = 1353 Score = 362 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 157/409 (38%), Gaps = 23/409 (5%) Query: 11 LLTSPVWIVSPFEEQLIYANSAAKLLMQD-LTFSQLRTGPYSV---SSQKELPKYLSDLQ 66 + SP I+ E ++IY N AA + + + S + + + Sbjct: 665 IEESPAAILVHRELRIIYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVATARVRHIT 724 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 N +E L + II+EG+ A T S Sbjct: 725 N------TGHAAPLIDEKYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRDISE-RKLAHD 777 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 K A F + + D I+D N A GY+ + + ++ + GR+ Sbjct: 778 KLQLAANVFSHAREGIAITDARA--TIIDVNEAFCRITGYSRDEVLGQNPRVLGS-GRQD 834 Query: 187 MPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + H G GH ++ +G + ++ + + DI+ Sbjct: 835 KAFYAAMWHDLGEQGHWYGEIWNRRKNGELYPEMLTISAVRTDQGQVQNYVALFSDISAI 894 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K + +LEH AH DA+T L NR + Q Q +L +D D FK IND + Sbjct: 895 KAHQHELEHIAHFDALTNLPNRVLLADRLQQAMAQAQRRGQMLALAYLDLDGFKAINDRH 954 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETIRVSVAK 361 GH GD +L +A ++ R+GD + R GG+EFV +L A + + + + A+ Sbjct: 955 GHEAGDLLLMTVATRMKQTLREGDTLARIGGDEFVAVLLDLSDSKASAPMLSRLLAAAAE 1014 Query: 362 VSISGL--PRFTVSIGVAHHE--GNESIDELFKRVDDALYRAKNDGRNR 406 G + + S+GV + D+L ++ D A+Y+AK G+NR Sbjct: 1015 PVRLGDLALQVSASLGVTFYPQVDEMEADQLLRQADQAMYQAKLAGKNR 1063 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 6/160 (3%) Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + + E A + ++ +A R + + + A +L+ R+ +I+ N Sbjct: 628 SAEIASVERFARIAAIVIEGQAAAKKMRDSEERFRTLIEESPAAILV---HRELRIIYLN 684 Query: 158 LAALNFYG-YNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP--LNFVHKLADGST 214 AA+ +G + + K ++ + GH ++ + DG+ Sbjct: 685 PAAIAMFGARTAQELVGKALLDLIHPDSHQVATARVRHITNTGHAAPLIDEKYLRLDGTP 744 Query: 215 RHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 V+ + I G + DI+E+K ++L+ AA+ Sbjct: 745 IDVEVQSTSIIYEGLAAIRTAFRDISERKLAHDKLQLAAN 784 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 6/128 (4%) Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + +++ + T+SA + +I G+I AN +G +T+ + Sbjct: 358 LAHLHQRETLLKQILDTSSAAIFVI--DSQGRITQANQRMAEMFGCPLDTLIGHDYVSLV 415 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIY--GDKLMLCIV 236 R + + ++ L + AD S + ++ Sbjct: 416 HPAERNVGQQNMLALLANKVSSSDLERLYWRADESEFWGHLACRGFHDASTHQHCFVGVI 475 Query: 237 HDITEQKR 244 DITE+ + Sbjct: 476 TDITERIQ 483 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 87/410 (21%), Positives = 167/410 (40%), Gaps = 22/410 (5%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY--LSDLQ 66 + + + ++ N AA + + ++ PY V+ + ++ L +L Sbjct: 217 IQASPQGI-VAVDCGGKVTLWNRAAVEIFG-WSAEEVLGKPYPVAPAERAAEHRKLRELV 274 Query: 67 NQ-HDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQ 124 Q I ++ +R+++ + + L + + + I + + + Sbjct: 275 LQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDIS-------ARKRN 327 Query: 125 RKKQGFYARFFLTNSAPMLLID-PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 ++ R ++ + + D D I+ N A GY + + K+ + Sbjct: 328 EQELVLLKRAMESSINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRGDD 387 Query: 184 RRVMPIMHEISHLPGGHKP-LNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 R + + + + DGS + + P+ + + +++DIT Sbjct: 388 RDQAELKKLVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDIT 447 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ-HLAIAQDYSLLLIDTDRFKHIN 299 E +R EEQL + A HD +TGL NR ++ +D D FK +N Sbjct: 448 EHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVN 507 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVS 358 D GH+ GD +L A+A L++C R GD V R GG+E++++LP + +++A+ + Sbjct: 508 DTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINV 567 Query: 359 VAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 A + T SIG+A E++D L K D A+Y AK G+N Sbjct: 568 FAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 78/249 (31%), Gaps = 9/249 (3%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 LD + + I +L+ N AA+ L + + + + K L Sbjct: 90 LDHIADGI-ISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPL 148 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN---YQR 125 E + E + + + +G+ + + S R Sbjct: 149 VCCGE-EHSRLTCEAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRETGERLR 207 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + ++P ++ G++ N AA+ +G++ E + K Sbjct: 208 ETNEKLDTLI--QASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYPVAPAERAA 265 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQK 243 + E+ + + DGS V A PI ++ I+ DI+ +K Sbjct: 266 EHRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARK 325 Query: 244 RLEEQLEHA 252 R E++L Sbjct: 326 RNEQELVLL 334 Score = 81.3 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 4/127 (3%) Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RV 186 L + +I G+++ N AA +GY + +I + + Sbjct: 82 ASLHTDLLLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKD 141 Query: 187 MPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 P++ + H L +DGS +++ G L IV D+TE + Sbjct: 142 NPLLTPLVCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRE 201 Query: 245 LEEQLEH 251 E+L Sbjct: 202 TGERLRE 208 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 92/396 (23%), Positives = 150/396 (37%), Gaps = 14/396 (3%) Query: 21 PFEEQLIYANSAAKLLMQDLT---FSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 + ++ +AN AA+ L Q +G + + + D + +++ Sbjct: 412 DADCRVEFANPAAEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVSI 471 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 +R ++T + + I+ G + + +A+ F T Sbjct: 472 RRAFDQTLYHRDGRVLVVDYAFRPILEGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDT 531 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 + +++ G+I+ N A GY+ E + ++ I GR+ + Sbjct: 532 ATEGVMI--ADARGRILSVNRAFEQVTGYSAEEVVGRNPS-ILSSGRQDKAFYRRMWDTI 588 Query: 198 GGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAA 253 G ++ DG I + + + DIT QKR E++++ A Sbjct: 589 KGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQEIDFLA 648 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 +HD +TGL NR F Q LLL+D DRF+ IND GH GD +L Sbjct: 649 NHDPLTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRE 708 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISG--LPRF 370 R L C R D V R GG+EF ++L A AE I ++ G Sbjct: 709 TGRRLGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFC 768 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 TVSIG+A L + D A+ AK +GRN Sbjct: 769 TVSIGIAVFPADGTDAATLLRHADTAMALAKREGRN 804 Score = 68.6 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 60/234 (25%), Gaps = 21/234 (8%) Query: 37 MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT 96 + + +L LS+L Q+ R Sbjct: 291 LNYQSVHELLYALRLPPYDAPRQFSLSELWVQYQWQISAGFLLLFGLALALFRGQRLNRR 350 Query: 97 ETEPVIIFEGIEAPATL-----GLKASRSANYQRKKQGF-----YARFFLTNSAPMLLID 146 E + + T R +R+ + + + + + Sbjct: 351 LAEAGRLLQSRVEMRTEHLNVANRSLQREVEQRRQAEAEVLAQSRRQAQVLEAVDEAIFG 410 Query: 147 PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFV 206 D ++ AN AA G + M + + + E P+ Sbjct: 411 LDADCRVEFANPAAEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVS 470 Query: 207 HKL--------ADGSTRHVQTYAGPIEIYGDKLMLCIV--HDITEQKRLEEQLE 250 + DG V PI G ++ + DIT +KR+EE L Sbjct: 471 IRRAFDQTLYHRDGRVLVVDYAFRPIL-EGGQVRGGVFSCRDITGRKRIEESLR 523 >UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SS1_RHOFD Length = 571 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 145/383 (37%), Gaps = 20/383 (5%) Query: 34 KLLMQDLTF---SQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRL 90 +L+ D +L + P +L I + + Sbjct: 187 RLISGDKPIAIVGELASRPLICVPGATSLYQARNLFIDKHIRHLGVTGSDGKLLG----- 241 Query: 91 VLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRD 150 L E I + I K RS ++ Q A+ F + +++ + + Sbjct: 242 -LVTFAELLASIEHDYIRELRETLKKRERSLVISKQHQRLAAKVFESTFEGIMI--TNAE 298 Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHK 208 I N A G+ + K I G+ ++ GH ++ Sbjct: 299 SVIESVNPAFTQITGFMAHEVIGKTPA-ILSSGKHQEIFYRKMREDIAATGHWQGEIWNR 357 Query: 209 LADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQ 266 G T + + + + DIT +K EEQ+ AHHD +TGL NR Sbjct: 358 RRTGETYPEWLTINAVSNDDGEVTHYVGVFSDITTRKAAEEQVLFLAHHDGLTGLPNRAL 417 Query: 267 FYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGD 326 F + +++ +D D FK ND GH GD++L +A+ L +C R+GD Sbjct: 418 FADRLHQAIVHAHRDRAKVAVMFLDLDNFKQTNDTLGHHIGDQLLQMVAQRLTNCMREGD 477 Query: 327 LVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSISGLPR--FTVSIGVAHHEGN- 382 V R GG+EF ++L T L++ I +V+ + T SIGV+ + + Sbjct: 478 TVARLGGDEFTVVLESITNTGDIAYLSQKIIDTVSHPLLLDGHEIAVTCSIGVSVYPDDS 537 Query: 383 ESIDELFKRVDDALYRAKNDGRN 405 E D+L K D A+YRAK GRN Sbjct: 538 EESDDLIKYADTAMYRAKEGGRN 560 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 84/420 (20%), Positives = 153/420 (36%), Gaps = 33/420 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIY---------ANSAAKLLMQDLTFSQLRTGPYSVSSQKEL 58 + +W + + N + + L G + Sbjct: 329 ATEATGVGIWEFDLKTRRYHWDLAMFGLFGLNPQTVNALNNDWQQLLLPGELL-----RM 383 Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 Q ++ R+++ R +++ A+ + + Sbjct: 384 KDATRVTIKQGQAFDLTFQIRRQDGQVRFMR---------NRAVLYNDGSHAASRLIGTT 434 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 ++ ++ ++ + I+ N A +GY + + Sbjct: 435 EDVTERKLREADLRVAATAFECQESIMVTDANQLILRVNRAFTELFGYTAQDVLGATPRV 494 Query: 179 INMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLC 234 + GR + GG + +G V + + G + Sbjct: 495 LQS-GRHDPAFYAAMWDGITRGGAWQGEIWDRRKNGECFPVWLSITVVCGDDGGVSHYVA 553 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 DIT +K E+ + A +D +TGL NRR Q +LL +D D+ Sbjct: 554 THTDITLRKAAEDDIRQLAFYDPLTGLPNRRLLQDRLHQAMSQARRERGRLALLFLDLDK 613 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAE 353 FK +ND +GH GDE+L A+A+ L++C R+ D V R GG+EFVLLLP A+++AE Sbjct: 614 FKPVNDDFGHQAGDELLQAVAQRLQACVRESDTVARLGGDEFVLLLPSIEAAQDAMAVAE 673 Query: 354 TIRVSVAKVSISGLPR-FTVSI--GVAHHEGNESID-ELFKRVDDALYRAKNDGRNRVLA 409 I + + R T+S G+A + + S + L + D+A+Y+AK GR+R + Sbjct: 674 KIHQAFGRPFTLSAGRNATMSFSTGIAVYPEHASDEKALMRHADEAMYQAKAAGRDRFVL 733 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 93/375 (24%), Positives = 145/375 (38%), Gaps = 14/375 (3%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTET 98 D + P ++ + Y+ Q+ D V L+ L++ L Sbjct: 230 DTITRDILALPTGARAESVIHAYVDGYQHATDRAHTYRVLLFVVALGLAGYLMIAILRLQ 289 Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 + G ++ R + YA F S M + +IV N Sbjct: 290 RTSLALAGANEHLEERIQTLRLTE---SELHLYANVFTNASEGMAI--TDAQARIVAVNP 344 Query: 159 AALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRH 216 A + GY+ E + + + GR+ E+ G G ++ G Sbjct: 345 AFTDITGYSIEEIHGRTPAVL-ASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYP 403 Query: 217 VQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 I + I DIT++K E ++ H AHHDA+TGL NR Sbjct: 404 EWLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQA 463 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 ++ + ++L +D DRFK IND GH GD +L + + R+ D V R GG+ Sbjct: 464 ILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGD 523 Query: 335 EFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRFTV--SIGVAHHE-GNESIDELFK 390 EFV++LP A ++A I ++ + G TV SIG+A + L + Sbjct: 524 EFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLR 583 Query: 391 RVDDALYRAKNDGRN 405 D A+YRAK DGRN Sbjct: 584 NADAAMYRAKADGRN 598 Score = 41.3 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 43/156 (27%), Gaps = 10/156 (6%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 N + + I + + +++ N A + P ++S ++ + + Sbjct: 319 YANVFTNASEGMAI-TDAQARIVAVNPAFTDITGYSIEEIHGRTPAVLASGRQDAAFYRE 377 Query: 65 LQNQHDII-----EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + EI +R E + V + GI + T ++ Sbjct: 378 MWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAIT-EGDGGVSHYIGIFSDITDRKESEA 436 Query: 120 SANYQRKKQGFY---ARFFLTNSAPMLLIDPSRDGQ 152 + R L + ++ R+ Sbjct: 437 RIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNST 472 >UniRef50_UPI0001698C53 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C53 Length = 457 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 150/411 (36%), Gaps = 17/411 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS---VSSQKELPK 60 LD T ++ + ++ + N AA L+ L + + Sbjct: 12 RFAAILDATTVGLF-GLDRDGRVTFVNGAACRLLGHSEEGLLGGTHHDRVHYAKSDGSTY 70 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 LS+ + V EE + T ++ G + + Sbjct: 71 PLSECPIHQSLQTGKIVH--GEELFFHRDGRGIAVEFTCSPLVDGGEVEGVVVTFQDISE 128 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 +++ F ++ ++ G I+ N A GY+ + ++ + Sbjct: 129 RKAVKRRLRLATTVF--DNTHDGILVTDEKGTILTVNPAFSEITGYSEAEVRGQNPR-LL 185 Query: 181 MLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 G++ + G ++ DG ++ ++ + I Sbjct: 186 RSGKQRADFYEAMWSTIRQRGRWQGEIRNRNRDGDIFPAWLTISSVKDDQGEVTNYVGIF 245 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DI+ K EQ+EH A+HD +TGL NR F + Q ++L +D DRFK Sbjct: 246 SDISPLKHSLEQIEHLANHDPLTGLPNRLLFLDRLKVAVRQARRGGHALAVLFLDIDRFK 305 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 IND GH+ GD++L +A + R+ D V R GG+EFV+L+ A +A + Sbjct: 306 DINDSLGHAMGDQLLLEMAARVRGQVREEDTVARLGGDEFVILIGDVESASEAELVARKV 365 Query: 356 RVSVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDG 403 + VS+G++ + ES DEL + D A+Y AK G Sbjct: 366 MQGLEVPIRLETSEIILRVSMGISLYPNDGESADELIRHADIAMYHAKERG 416 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 Q + ++ + L RDG++ N AA G++ E + + + Sbjct: 7 SQLSQRFAAILDATTVGLFGLDRDGRVTFVNGAACRLLGHSEEGLLGGTHHDRVHYAKSD 66 Query: 187 MPIMH------EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCIVHDI 239 S G + DG V+ P+ G+ + ++ DI Sbjct: 67 GSTYPLSECPIHQSLQTGKIVHGEELFFHRDGRGIAVEFTCSPLVDGGEVEGVVVTFQDI 126 Query: 240 TEQKRLEEQLEHAAHH 255 +E+K ++ +L A Sbjct: 127 SERKAVKRRL-RLATT 141 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 89/382 (23%), Positives = 153/382 (40%), Gaps = 17/382 (4%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTET 98 + + S + Y + L L N D+ ++ + + + +L R + Sbjct: 310 EWSLSYVSENCYRILQSGLKSLVLKPLVNPEDLPQMEALLAAGGDASRWVKLEFRLCLGS 369 Query: 99 EPVIIFE-------GIEAPATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRD 150 E FE A +RK + L + L+ SRD Sbjct: 370 EEPRWFECCVLPIKDDHAEVVQYHGVLHDITERRKGEHDLRLAQVLFRTTNEALMISSRD 429 Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHK 208 +I N A GY + + K ++ GR P ++ H G ++ Sbjct: 430 NKIEMVNPAFSRITGYQLDEVLGKGP-DLLQSGRHDAPFYTQMWHALQQDGAWEGEIWNR 488 Query: 209 LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQ 266 G T + + + DIT++K+ EE + H A++D +T L NR Sbjct: 489 RKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNL 548 Query: 267 FYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGD 326 F+ + + Q +LL ID DRFK +ND GH+ GD++L +A L C R+ D Sbjct: 549 FHDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESD 608 Query: 327 LVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS--ISGLPRFTVSIGVAHHEGN- 382 + R GG+EF ++LP + LA+ + + + + SIG+ + + Sbjct: 609 TIARLGGDEFTVILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDA 668 Query: 383 ESIDELFKRVDDALYRAKNDGR 404 +++ +L K D A+YRAK +GR Sbjct: 669 DNMMDLVKNADVAMYRAKENGR 690 Score = 58.6 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 7/161 (4%) Query: 97 ETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDA 156 + + L L+ S +K+ AR + +L + + + Sbjct: 257 SQALRVFRDQFAINEGLRLEREESLKQAAEKREELARIIEISHTVVLSWENDEEWSLSYV 316 Query: 157 NLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP-LNFVHKLADGSTR 215 + +++ K + + L F L R Sbjct: 317 SENCYRILQSGLKSLVLKP---LVNPEDLPQMEALLAAGGDASRWVKLEFRLCLGSEEPR 373 Query: 216 HVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAH 254 + PI+ ++ ++HDITE+++ E L A Sbjct: 374 WFECCVLPIKDDHAEVVQYHGVLHDITERRKGEHDL-RLAQ 413 >UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSP1_THISH Length = 882 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 87/416 (20%), Positives = 155/416 (37%), Gaps = 14/416 (3%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 + L + + + Q + + + + V + ++LS + Sbjct: 467 AIIRALPD-IGFIIDDQGQYRDVFGGLDSQLYHRGQALIGKRLHEVLPLELADRFLSVVH 525 Query: 67 NQHDIIEILTVQR--KEEETALSCRLVLR-KLTETEPVIIFEGIEAPATLGLKASRSANY 123 + + T++ E+ ++ + L V+ + + + Sbjct: 526 KALETSSLQTLEYALSAEQISIPPKGGPDGTLWFEGRVMAMGARVFDRPAVIWLAMNVTA 585 Query: 124 QRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +++ + + + + +I+ AN A GY + ++ + Sbjct: 586 RKRLEESMRLNARVFEDSNEGIFITDAGNRIISANTAFTRITGYEAAEVIGRNPG-LLSS 644 Query: 183 GRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHD 238 G + L G ++ DG + ++ + I D Sbjct: 645 GMHDEAFYQSLWEQVLLHGRWEGEIWNRRKDGRVYPQNLSISVVRDGEGRISHHIAIFSD 704 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT +K E Q+ H A HD +TGL NR Q +LL ID D FK + Sbjct: 705 ITRRKEAEAQIRHMALHDNLTGLANRTLLRDRLTQAIEQARRDRNSLALLFIDLDDFKPV 764 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAETIRV 357 ND +GH GD VL +A+ L + R+ D V R GG+EFV+LL + A+ +AE I Sbjct: 765 NDTHGHEAGDRVLKEVAQRLRAAVRRVDTVARMGGDEFVILLQALEQEDMAIQVAEKIID 824 Query: 358 SVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 S+++ S+G+A H E D L + D ALY+AK+ G+NR A Sbjct: 825 SLSRPIQLNGQTCLLGASVGIALHPRHGEDHDGLMRAADQALYQAKSAGKNRYQVA 880 Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 7/132 (5%) Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 R+ + Y S ++ +DG + N + +G++ E + + + Sbjct: 330 QRLRQSEVKYRALMENLSDGACIV---QDGWLRYVNPRFRDIFGHDEELLLSHQLSDFLV 386 Query: 182 LGRRVMPIMHEISHLPGGHKPL----NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 R + +P + D +V+ + +L V Sbjct: 387 AEDRDQLARLMSRVIADPARPGPLETELRIRTGDAGHSYVRINLSAMAWEDGPAILATVS 446 Query: 238 DITEQKRLEEQL 249 DI ++KRL QL Sbjct: 447 DIDDRKRLANQL 458 >UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXR7_HALHL Length = 749 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 90/414 (21%), Positives = 146/414 (35%), Gaps = 18/414 (4%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLM--QDLTFSQLRTGPYSVSSQKELP 59 + + +++ E ++ AN AA L+ QL + +V +Q L Sbjct: 69 LDRYHDLFQRAPVG-YLLLDDEGRIWEANRAAADLLAPGGDLTGQLLSDFVAVDAQDALY 127 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + L + E + + R+ + +P Sbjct: 128 LHWRALTAARAPQAVELTLAWAEGASCAVRME--------SSVEPTADRSPCRFRCALMD 179 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +R ++ + A ++ DG + N A GY + Sbjct: 180 ITERRRSEEQLRIAARVFEDAGDAIVVTDPDGHVQTINNAFTRITGYTEGEALGNTVCAL 239 Query: 180 NMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 GR E G+ H+ G I+ + + + Sbjct: 240 LDSGRHSEAFHKEKQESLDRSGYWQGEIWHRRKGGELYPEWLTINRIDDATGQPQHFVAV 299 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT+ K + E+ A+HD +TGL NR F + Q L+ +D D F Sbjct: 300 FSDITQLKDAHSRSEYLANHDPLTGLPNRSLFQDRLQQAIAQTQRHEGQVGLMFLDLDHF 359 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K IND GH GDE+L +A L R D V R GG+EF ++L + S+A+ + Sbjct: 360 KTINDTLGHEVGDELLVQVAERLGELVRDVDTVARIGGDEFTVVLTDCDPEEVGSIAQRL 419 Query: 356 RVSVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + + + T S G+A + E + L K D A+YRAK DGRNR Sbjct: 420 VEGLGGTFVVDGRELQATPSAGLALYPRDGEDVHTLCKAADMAMYRAKEDGRNR 473 Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 10/170 (5%) Query: 87 SCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLID 146 R + L + E L R + + R AP+ + Sbjct: 32 WSRADTQSLVAELELHQQELRIQNEELQQARDRLETALDRYHDLFQR------APVGYLL 85 Query: 147 PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP-LNF 205 +G+I +AN AA + + + + + + +H + + Sbjct: 86 LDDEGRIWEANRAAADLL-APGGDLTGQLLSDFVAVDAQDALYLHWRALTAARAPQAVEL 144 Query: 206 VHKLADGSTRHV--QTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 A+G++ V ++ P C + DITE++R EEQL AA Sbjct: 145 TLAWAEGASCAVRMESSVEPTADRSPCRFRCALMDITERRRSEEQLRIAA 194 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 152/411 (36%), Gaps = 17/411 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 ++ S + + + +AN + T + + P+ + Sbjct: 863 VRLQAVMNNSVSLMAV-KDAPGRYQFANPKFEQTFGFATGEVIGKTDL-----QLFPEAV 916 Query: 63 SDLQNQHDIIEILTVQRKEEETALS-CRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 SDL + ++ I + E E +L L P+ +G + Sbjct: 917 SDLFRESELEAIRLRKGIEREESLPLAAGERHFLVVRFPLFDDDGAITGLCFQATDITAR 976 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ A F S +++ D + +I+ N + GY + + K + Sbjct: 977 KRAEEQLRLAALVFDRASEGVMVTDT--EQRILTINDSFSTLTGYTRQEVVGKTPR-LLR 1033 Query: 182 LGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 R E+ G ++ +G ++ K+ + + Sbjct: 1034 SDRMPREFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFS 1093 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT+ + ++++E+ A HD +TGL NR F + ++ ID D FK Sbjct: 1094 DITKVRESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKV 1153 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 +ND GH GD++L A L C R D V R GG+EFV+LL A AE + Sbjct: 1154 VNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLT 1213 Query: 358 SVAKVSISGLPR--FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 ++ G + SIG++ + + L + D A+YRAK+ G+N Sbjct: 1214 GLSTSYHFGEHECFISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKN 1264 Score = 84.4 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 66/241 (27%), Gaps = 14/241 (5%) Query: 18 IVSPFEEQLIYANSAAKLLM--QDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEIL 75 +V L NSAA L + +L + + + + + Sbjct: 756 LVLDRNASLQRFNSAAARLFKLGAAQTGRHLRDLPLPPDMPDLLADVQHVIDTQNARDRQ 815 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 V AL +LR G+ R+ Q Sbjct: 816 IVNANRRHYALHIAPLLRD------TQRIAGVILLFADNTSLYEVERSARETQVRLQAVM 869 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + + M + G+ AN +G+ + K ++ + E+ Sbjct: 870 NNSVSLMAV--KDAPGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEA 927 Query: 196 LP-GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHA 252 + LA G RH P+ + DIT +KR EEQL A Sbjct: 928 IRLRKGIEREESLPLAAGE-RHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQLRLA 986 Query: 253 A 253 A Sbjct: 987 A 987 >UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZJQ2_THASP Length = 1050 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 84/412 (20%), Positives = 148/412 (35%), Gaps = 14/412 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 H N ++ + W + + A ++ G + Sbjct: 358 HLRNVIEATQAGSWEWNLETGEWKMDARWA-AMLGLAAEDCDGEGRACWRKRVHPADLAE 416 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + I T + + C + + + + + A L A + Sbjct: 417 AERELDRHIRGETAFYEHDLRLRHCDGRWIWVYDRALAVRRDA-DGRALLLTGAQIDIDR 475 Query: 124 QRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +++ + + +S+ ++ D +IVD N A GY+ E + + Sbjct: 476 RKENEERLRLAASVFSSSYEAILITDVDNRIVDVNPAFCRITGYSREESLGRDPGML-AS 534 Query: 183 GRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHD 238 GR+ + H ++ DGS + +++ L + D Sbjct: 535 GRQGREFYRAMWQAIEEHDHWQGELWNRRKDGSEFAEVLSISRVRDARGRVIHHLAMFSD 594 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 I+ K+ EE+L A+ D +TG NRR + ++ +ID D FK + Sbjct: 595 ISRLKKHEEELNRIAYFDPLTGAPNRRLLDDRLRQAIAHSRRTGKPLAVCVIDLDGFKPV 654 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVS 358 ND GH GD+VL + L + R D V R GG+EFVLLL + + E + + Sbjct: 655 NDQLGHEAGDQVLIGIVDRLGAILRASDTVARLGGDEFVLLLEDIEGE---RVLERVLEA 711 Query: 359 VAKVS--ISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 + S + SIGV ++ D L + D A+YRAK GRN + Sbjct: 712 IRTPIALASQQVCVSASIGVTLFPEDDADPDTLLRHADQAMYRAKQRGRNCI 763 Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 17/169 (10%), Positives = 50/169 (29%), Gaps = 21/169 (12%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 ++ + +++ + +++ N A + L P ++S ++ ++ Sbjct: 483 LRLAASVFSSSYEAILITDVDNRIVDVNPAFCRITGYSREESLGRDPGMLASGRQGREFY 542 Query: 63 SDL-----QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 + ++ H E+ ++ E A + + VI + + + K Sbjct: 543 RAMWQAIEEHDHWQGELWNRRKDGSEFAEVLSISRVR-DARGRVIHHLAMFSDISRLKKH 601 Query: 118 SRSANY------------QRKKQGFYARFFLTN---SAPMLLIDPSRDG 151 N +R + + P+ + DG Sbjct: 602 EEELNRIAYFDPLTGAPNRRLLDDRLRQAIAHSRRTGKPLAVCVIDLDG 650 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 89/416 (21%), Positives = 158/416 (37%), Gaps = 19/416 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS--VSSQKELPKYLSDL 65 L +++ +W + + N+AA ++ ++ S + Y ++ Sbjct: 365 ILGSVSNGIW-GLDKDGNTTFVNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAER 423 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 H + + +E + + I G A + + ++ Sbjct: 424 CPMHATLVDGKPRMGIDEVLWRKDGSELYVDYSSHPIRSHGEMEGAVVVF--EDISERRQ 481 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 K + + S+ ++ +I+D N A GY E + K I G+ Sbjct: 482 KDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPG-IFQSGKH 540 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITE 241 ++ L GH +G I + + DITE Sbjct: 541 DAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITE 600 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +KR +E + A+ D +T L NRR F + +LL +D D+FK +ND Sbjct: 601 KKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDT 660 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT------ALSLAETI 355 +GHS GD++L +AR L SC R+ D V R GG+EF+++L + A +AE I Sbjct: 661 FGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKI 720 Query: 356 RVSVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVL 408 R + + + SIG+ ++ + L VD A+Y++K GRN + Sbjct: 721 RNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAIC 776 Score = 83.6 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 32/280 (11%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYA------NSAAKL----LMQDLTFSQLRTGPYS 51 +T + ++ V I++ E L+ A N A L F +LR P+ Sbjct: 214 LTRQADAFVTDSNGVIILAHDPEMLMMAVTDAKVNRLAAQQRLELYGRTDFPELRITPWQ 273 Query: 52 VSSQKELPKY----LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGI 107 + L +Q D+ E ++ E + L+L + ++ G Sbjct: 274 EMADVRLRHIGNEDYPHIQAVTDLPEYG-LEIHSEADLPNLPLLLNQRRSNFLLLWLLGS 332 Query: 108 EAPATLG------LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 T+ +S + + S + +DG N AA Sbjct: 333 VTLLTVVSLTFYFRSIRQSRSAVAASEQRLRLIL--GSVSNGIWGLDKDGNTTFVNAAAA 390 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIM------HEISHLPGGHKPLNFVHK-LADGST 214 + GY E + K + + G + DGS Sbjct: 391 DMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLWRKDGSE 450 Query: 215 RHVQTYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAA 253 +V + PI +G+ + + + DI+E+++ +E L A Sbjct: 451 LYVDYSSHPIRSHGEMEGAVVVFEDISERRQKDEAL-KLA 489 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 9/311 (2%) Query: 103 IFEGIEAPATLGLKASRSANYQRK-KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 + + + L+ + ++K + +P ++ D I AN Sbjct: 569 LLLEMAMDISFALERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFT 628 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQT 219 GY+ + + K+ G+ ++ G ++ DG+ Sbjct: 629 KVTGYSLDEVLGKNPR-FMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESV 687 Query: 220 YAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ 277 P+ ++ L I DITE++ EE++E H D +TGL NR Q + Sbjct: 688 LISPVSQVDGRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSL 747 Query: 278 HLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFV 337 + +++ +D D FK IND GHS GD++L +A+ L+ R D V R GG+EF+ Sbjct: 748 AQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFI 807 Query: 338 LLLPRTPLDTALSLAETIRVSVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDD 394 L+LP T + A +A + +V++ T SIG+A + E+ + L K D Sbjct: 808 LILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADT 867 Query: 395 ALYRAKNDGRN 405 A+YR K+DGRN Sbjct: 868 AMYRVKHDGRN 878 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 53/207 (25%), Gaps = 9/207 (4%) Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 + K LS D +QR T S + V L ++ Sbjct: 223 IDKDLSAWNRDPDSAYFKILQRWGGRTPASI-VPPVVWRTLGGVSGVLLFSLLGLLFMRK 281 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 Q+ ++ P LL + DG + + + + K Sbjct: 282 QIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIG 341 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 ++ + + G + + ++ + + Sbjct: 342 DVLPPDAADICMSALQEANMTGRSNGKTYALSLPQGESWFELSISKKQDAKNQAPRFIVL 401 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLL 262 V D+T++K E + +T L Sbjct: 402 VRDVTQRKVNETHILR------LTKLY 422 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 153/416 (36%), Gaps = 26/416 (6%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQD-LTFSQLRTGPYSVSSQKELPKYLS 63 ++ + + VW P + + + A+ L+ L G + + ++ Sbjct: 440 YRELVESVQAIVWRAIPG-GKFTFVSKEAEALLGYPLAQWTTDPGFWVDKIHPDDRDWVV 498 Query: 64 D------LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 + L+ Q + + + + + G+ T A Sbjct: 499 EYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVGVMLDITASKAA 558 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R+ + ++ ++ ++++ N A GY+ E + K Sbjct: 559 EADLRLARQ---------VFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKLPS 609 Query: 178 EINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 + G I G ++ G + + + + Sbjct: 610 -VMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYV 668 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 + DIT++K EE+L+ A+HDA+T L NR + + ++L ID D Sbjct: 669 AVFTDITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLD 728 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 RFK IND GH GD +L A+ L+ C R+ D V R GG+EFV+L+ D ++A Sbjct: 729 RFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIA 788 Query: 353 ETIRVSVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I ++A+ I + SIG++ + L K D A+YRAK G+N Sbjct: 789 RKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKN 844 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 72/262 (27%), Gaps = 17/262 (6%) Query: 2 ITHNFNTLDLL-------TSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSS 54 + +T D L V I+ +++Y N A + + Sbjct: 306 LKEQLDTYDALLHAQADVNEGVAIIH--RGKIVYGNDALWRIGGYSPGDIPLGSDFFSLI 363 Query: 55 QKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLG 114 K +S++ Q + + + + R + ++ + + I Sbjct: 364 HPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRIVTLIIDI 423 Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM--- 171 ++ K Q Y S ++ G+ + A GY Sbjct: 424 SSRKKAEAELVKSQQDYRELVE--SVQAIVWRAIPGGKFTFVSKEAEALLGYPLAQWTTD 481 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 +I+ R + L ++ ADG ++ I + Sbjct: 482 PGFWVDKIHPDDRDWVVEYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSNTR 541 Query: 232 ---MLCIVHDITEQKRLEEQLE 250 ++ ++ DIT K E L Sbjct: 542 PAELVGVMLDITASKAAEADLR 563 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 6/141 (4%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSA-PMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L RS +++ Y + + R G+IV N A GY+ + Sbjct: 295 LNAGRIRSEARLKEQLDTYDALLHAQADVNEGVAIIHR-GKIVYGNDALWRIGGYSPGDI 353 Query: 172 -CQKHTWEINMLGRRVM--PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + + R I + + +G H++ A Sbjct: 354 PLGSDFFSLIHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDS 413 Query: 229 DKLMLCIVHDITEQKRLEEQL 249 +++ I+ DI+ +K+ E +L Sbjct: 414 QRIVTLII-DISSRKKAEAEL 433 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 87/376 (23%), Positives = 141/376 (37%), Gaps = 16/376 (4%) Query: 37 MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT 96 ++S + K + + + D E L + Sbjct: 626 TSHASYSTYLELIHPDDRAKINRQMAAVTRGMQDRFEADH------RIICHKSGELLHIH 679 Query: 97 ETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDA 156 ++ + P+ + + ++G + ++A ++ G I D Sbjct: 680 ALG-IVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDV 738 Query: 157 NLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGST 214 N A GY + + ++ I GR ++ L GH + G Sbjct: 739 NPAYQRIMGYTRDEIVGQNPS-ILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEI 797 Query: 215 RHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE 272 I + + + DIT+QK EEQLE A++D +T L NR F E Sbjct: 798 FPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLE 857 Query: 273 PGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWG 332 + L ID DRFK++ND GH KGD++L +A ++ R D V R G Sbjct: 858 QEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLG 917 Query: 333 GEEFVLLLPRTP-LDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDEL 388 G+EF ++LP + +A I S+ +V + SIG+A H E + L Sbjct: 918 GDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETL 977 Query: 389 FKRVDDALYRAKNDGR 404 K D A+YRAK +GR Sbjct: 978 TKHADTAMYRAKEEGR 993 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 149/408 (36%), Gaps = 26/408 (6%) Query: 13 TSPVWIVSPFEEQ-LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHD- 70 ++PV I + + N +L G ++ +++ D Sbjct: 671 SAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELGDGWLEGMHPEDRSRWICAYSAAFDA 730 Query: 71 ----IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 IE +R E + + R I + G + + ++ Sbjct: 731 RKPFEIEYRLRRRDGEYRTILGKATPRF-DAGGEFIGYIGSCIDIS---------DRKKG 780 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + + +I + IV N A + GY+ E + + GR Sbjct: 781 DESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQS-GRHG 839 Query: 187 MPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + G F ++ +G V + + + + DI+ Sbjct: 840 KEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISSL 899 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K EE + H A++D ++ L NRR E ++ +++ +D D FK +ND Sbjct: 900 KEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSL 959 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKV 362 GH GDE+L +A ++ R+ D V R GG+EF LLLP D +A+ I ++ K Sbjct: 960 GHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKILAALRKP 1019 Query: 363 SISGLPR---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + T SIG++ + + L + D A+Y AK GRN+ Sbjct: 1020 -FEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAKQQGRNQ 1066 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 1/144 (0%) Query: 110 PATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 ++ + ++++ RF + A ++ RD +IVD N AL+ YGY+ Sbjct: 337 RSSERHHMQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSR 396 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 E + ++ + L G VH DG V+ I + G Sbjct: 397 EELAGMTLADVVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEG 456 Query: 229 DKLMLCIVHDITEQKRLEEQLEHA 252 + IV D+TE+KR+E L Sbjct: 457 SDFVQAIVRDVTERKRIELALARQ 480 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 3/159 (1%) Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 + + + A L A R + R ++ NSAP+L+ Sbjct: 626 DIVAVLDTMAMDVSFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGC 685 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI-MHEISHLPGGHKPLNFVHKLADG 212 N LNF G + E E R I + + + + + DG Sbjct: 686 TFFNDMWLNFTGRSLEYELGDGWLEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDG 745 Query: 213 STRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQL 249 R + A P G + + DI+++K+ +E L Sbjct: 746 EYRTILGKATPRFDAGGEFIGYIGSCIDISDRKKGDESL 784 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 147/396 (37%), Gaps = 34/396 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 +V + + ++ N AA+ L + + E+ + Sbjct: 453 VVVNRKGRALFINPAAEALFGRPASQLEGE-------------LIGIPLVTKESTELEIL 499 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 ++ + + R+V E + ++++ + Sbjct: 500 RQDGQLKIVRMRVVEI------------SWEQETAYLASLTDVTDFKKTEDQLKMFSRAC 547 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-- 195 + +P+ ++ +G I N GY + ++ I G P + Sbjct: 548 DQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPR-ILKSGYTTEPEYDVLWRQI 606 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G F +K +G P+ + + DIT+QK EE L H A Sbjct: 607 TSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQA 666 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 ++DA+T L NR + + + +++ ID D FK+IND GH GD +L Sbjct: 667 NYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKE 726 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI--SGLPRF 370 L C RK D V R GG+EF+L++P+ L A +A + + + Sbjct: 727 AGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFI 786 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG+A + +++ L + D A+Y AK +GRN Sbjct: 787 SASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRN 822 Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 19/131 (14%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + R+ + T++ ++++ +R G+ + N AA +G + + Sbjct: 430 AEAALRESEARLRTIISTSTNGLVVV--NRKGRALFINPAAEALFGRPASQLEGELIGIP 487 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 + DG + V+ I + L + D+ Sbjct: 488 LVTKE-----------------STELEILRQDGQLKIVRMRVVEISWEQETAYLASLTDV 530 Query: 240 TEQKRLEEQLE 250 T+ K+ E+QL+ Sbjct: 531 TDFKKTEDQLK 541 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 162/410 (39%), Gaps = 17/410 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 +D L +WI + N + + Q + +++ S + K+ + Sbjct: 149 QEFIDCLEDHIWI-KGMDGLYSMTNRSVENAWQKTNSEIIGKDDFALFSHERAEKF---I 204 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 + + ++ T+ EE + L + + LG+ + + Sbjct: 205 EADNLVVATGTLNIVEECRQIDENNNPTWLETIKSPVRDNDGNLIGILGMTRNITRRKMV 264 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + Q A NS ++I R+ I+D N A GY E + K+ + G Sbjct: 265 ETQLSLASKIFNNSQEGMVI-TDRNANIIDVNTAFTQITGYRSEEVIGKNPRILRS-GHH 322 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 ++ H G F+++ DGS + + L +C+ DI+ Sbjct: 323 DQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISV 382 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K EE+L+ A +D +T L NR + E Q ++ L +D D FKHIND Sbjct: 383 RKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDS 442 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA--LSLAETIRVSV 359 GH GD++L LA L+ V R GG+EFV++LP D A ++ + I Sbjct: 443 MGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLETVGD-ILSVF 501 Query: 360 AKVSISGLP---RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + R + SIG+A + + + L K D A+Y AK +GRN Sbjct: 502 QQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKNGRN 551 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 84/418 (20%), Positives = 146/418 (34%), Gaps = 37/418 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQL--------------------RTGPYSVSSQKE 57 + + + + N A+ + + + + Sbjct: 725 VATDPQGLITVFNPGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAG 784 Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLK 116 ++ + + E T +++ ++ RL + + + + G T + Sbjct: 785 FDALVARARCSGQVDERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQKQ 844 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 A+ N K + + IV N A GY+ + ++ Sbjct: 845 AAAQLNLAAK---------VFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNP 895 Query: 177 WEINMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIE-IYGDKLML 233 + GR + GH ++ DGS ++ + Sbjct: 896 S-LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYI 954 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 DIT+ K E ++ AH DA+TGL NR + + +L+ +D D Sbjct: 955 GTFIDITQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLD 1014 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 RFK++ND GH GD +L +A L R D V R GG+EF+++LP T D A +A Sbjct: 1015 RFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAA 1074 Query: 354 TIRVSVAKVSISGLPRFTVSI--GVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVL 408 + +A T S+ G+A + ES + L D A+YRAK GRN Sbjct: 1075 KLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYC 1132 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 39/166 (23%), Gaps = 22/166 (13%) Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 + L + + R+ + A SA ++ G I N Sbjct: 680 HGLAASAAVALENSALLAERRQVEQALRESEALKASVL--ASAACGIVATDPQGLITVFN 737 Query: 158 LAALNFYGYNHETMCQKHTWEINMLG------------------RRVMPIMHEISHLPGG 199 A +GY + K T + + + G Sbjct: 738 PGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQ 797 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 DG ++ + L L + DIT QK Sbjct: 798 VDERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQK 843 Score = 57.8 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 65/232 (28%), Gaps = 12/232 (5%) Query: 31 SAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCR- 89 A LL + S Q D + +EE AL + Sbjct: 188 PANYLLYLYQAEREFNKAFSLYSGQFHRAVQKGDAATLALLQRGFAAISSDEEQALRRKW 247 Query: 90 -LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT-NSAPMLLIDP 147 + L+ + + + L +R + A T ++ P L + Sbjct: 248 MGIPFVLSPHTRYLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFEL 307 Query: 148 SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH---KPLN 204 DG+ D + + + + + ++ + GH + Sbjct: 308 GLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQFE 367 Query: 205 FVHKLADGSTRHVQTYAG--PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 + G + P + + + + DI+E+KR E +L A Sbjct: 368 LPLR---GGNFWFELSVARKPTGVGREPRFVVLARDISERKRAEARL-RMAT 415 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 17/252 (6%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 TLD + P++ + + + ++ L+ + + V LS L+ Sbjct: 295 ATLDAIPDPLFEL-GLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALR 353 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 + ++ E L +L+ L R + +++ Sbjct: 354 ---EAQATGHSAGQQFELPLRGGNFWFELSVARKPTGVGREPRFVVLA----RDISERKR 406 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH--TWEINMLGR 184 + +D D + + + L G +H E+ Sbjct: 407 AEARLRMATEATQLVFWELDLLSDQ--LRYDTSMLQVLGLDHGEDPGSTGALMELVHPDH 464 Query: 185 RVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAG-PIEIYGDKLMLCIVH--DI 239 R + + +F H+ G +QT + +L + +I Sbjct: 465 RAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVGTAMNI 524 Query: 240 TEQKRLEEQLEH 251 T++KR E L Sbjct: 525 TDRKRAEAALLR 536 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 135/375 (36%), Gaps = 17/375 (4%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTET 98 D +L + P + Y L + I + + T L + Sbjct: 198 DQPVGRLASRPLVTAKASASLYYARKLLAEKHIRHLGITSENNQLTG------LVGFADI 251 Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 I E + + + N ++ + F +++ +G I N Sbjct: 252 MASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIII--TDAEGIIETVNP 309 Query: 159 AALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRH 216 A G+ E + K+ ++ ++ + H +++ DG Sbjct: 310 AFTRITGWRREEVVGKNPRILSSS-QQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYT 368 Query: 217 VQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 I I DIT++K EE+L + A+HD +T L NR Sbjct: 369 EHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAA 428 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + + +L+ +D DRFK IND GH+ GD++L +A L R D V R GG+ Sbjct: 429 LTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGD 488 Query: 335 EFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP--RFTVSIGVAHHE-GNESIDELFK 390 EF ++L L A+ + V + T S+G+A + + + L Sbjct: 489 EFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRM 548 Query: 391 RVDDALYRAKNDGRN 405 D A+YRAK G+N Sbjct: 549 NADTAMYRAKERGKN 563 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 82/419 (19%), Positives = 153/419 (36%), Gaps = 28/419 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE-------- 57 +D +W + + + + N L + + P S ++ Sbjct: 400 RAIIDNSPIGIW-FTGIDGRYHFVNKTFCNLAG-IKEEDMLNTPSSNLAELLGDEIAHHC 457 Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + L + T+ R + + ++ V+ GI T Sbjct: 458 LDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDIT----- 512 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 N +++++ + ++ ++ +I+ N A GY+ + K+ Sbjct: 513 ----NKRQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNP- 567 Query: 178 EINMLGRRVMPIMHEISHLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--L 233 + G++ + G + +G I + + Sbjct: 568 NVFSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRI 627 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 + DITE+K+ + + A +D++T L NR F E Q ++L+ ID D Sbjct: 628 ALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFIDLD 687 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 FK IND GH GD +L + + C R+ D V R GG+EF +LL + S+ Sbjct: 688 NFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVESIC 747 Query: 353 ETIRVSVAKVSISGLP--RFTVSIGVAHHEGNESID-ELFKRVDDALYRAKNDGRNRVL 408 + + ++++ + S+GV + + S EL K D A+Y AKN GRNR Sbjct: 748 QKVLQTLSEPFFISKMYTYISASLGVTIYPNDASSTLELLKNADQAMYLAKNLGRNRFC 806 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 45/135 (33%), Gaps = 9/135 (6%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML--- 182 K++ + +++P+ + DG+ N N G E M + + L Sbjct: 392 KEEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGD 451 Query: 183 --GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHD 238 + H + ++ ++ ++ +++ + I D Sbjct: 452 EIAHHCLDSDKAALAQDSPHVSFETI-PRSNAKPYILEITKVKLKNAQGEVVGLIGISKD 510 Query: 239 ITEQKRLEEQLEHAA 253 IT +++ EE L A Sbjct: 511 ITNKRQQEEDL-KLA 524 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 89/405 (21%), Positives = 160/405 (39%), Gaps = 32/405 (7%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDL---------TFSQLRTGPYSVSSQKELPKYLSDLQ 66 ++ + + + Y + + ++ + +S++EL K Sbjct: 577 LYEYNLSDNKWTYMAPQVERIFGYKPEDWIDNQFWLDRVHEADWGKASREELSK-----L 631 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 NQ + I K++ + + R ++R ++ E + G+ T ++ + Sbjct: 632 NQQEAHSIEYRFYKKDGSIVWVRDIIRIESDAENKLCLHGLLIDITDSKQSESQLKKLSR 691 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 +P+ ++ +G+I N GY E + ++ I G + Sbjct: 692 ---------AIEQSPVSVVITDPEGRIEYVNPKFTQLTGYTLEEVIAQNPR-ILKSGNLL 741 Query: 187 MPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + + G +K DGS P+ K+ + + DIT++ Sbjct: 742 PSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDITQR 801 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K E++LE+ A HD +TGL NR Y E Q + +++L+D DRFK IND Sbjct: 802 KLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSL 861 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAK 361 GH GD+VL A+ + L+ R D V R GG+EFV+LL A +A + + + Sbjct: 862 GHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNE 921 Query: 362 VSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDG 403 + S G+ E N L + D A+Y+AK +G Sbjct: 922 PFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEG 966 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 89/261 (34%), Gaps = 16/261 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL---PK 60 + +D + + + +LI AN A +++ + +L S Q+ + P Sbjct: 435 KYRHIVDHAPFGITRTT-RDGKLISANPAMANILKYDSSQELLETIGRSSLQEVIFSNPA 493 Query: 61 YLSDLQNQHDIIEILTVQ----RKEEETALSCRLVLRKLTETEPVII-FEGIEAPATLGL 115 D+ ++ I + R ++ + +CR+ R+L+E +E T L Sbjct: 494 DREDMVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRLSEKGSQNWEYENFLEDITEQL 553 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + ++ +K A N+ +L D + +GY E Sbjct: 554 ETQQTLQKNKKNIQQLA----ENTEAVLYEYNLSDNKWTYMAPQVERIFGYKPEDWIDNQ 609 Query: 176 TWEINMLGRRVMPIMHE--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-M 232 W + E + + DGS V+ +KL + Sbjct: 610 FWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVRDIIRIESDAENKLCL 669 Query: 233 LCIVHDITEQKRLEEQLEHAA 253 ++ DIT+ K+ E QL+ + Sbjct: 670 HGLLIDITDSKQSESQLKKLS 690 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 67/244 (27%), Gaps = 30/244 (12%) Query: 15 PVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 VW+ E + ++ N D G + + + + + Sbjct: 341 GVWVDCIRERRAVFHN--------DYASLPHANGLPKGHPPIVRELVVPVFRGEKIVAVL 392 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + E T + + E + + Y Sbjct: 393 GMANKAEAYTQRDAEAASLLADFAWTTLERKLTEESLQV-------------SEQKYRHI 439 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE----TMCQKHTWEINMLGRRVMPIM 190 + AP + +RDG+++ AN A N Y+ + + + + Sbjct: 440 --VDHAPFGITRTTRDGKLISANPAMANILKYDSSQELLETIGRSSLQEVIFSNPADRED 497 Query: 191 HEISHLPGGHK-PLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLEE 247 + N + DGS + ++ + + + + DITEQ ++ Sbjct: 498 MVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRLSEKGSQNWEYENFLEDITEQLETQQ 557 Query: 248 QLEH 251 L+ Sbjct: 558 TLQK 561 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 46/173 (26%), Gaps = 14/173 (8%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG-QI 153 + ++ I L R N + + A + NS +L + DG I Sbjct: 105 IVKSPEAIRELPHRVARVLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPI 164 Query: 154 VDANLAALNFYGYNHETMCQKHTW--EINMLGRRVMPIMHEISHLPGGHK--PLNFVHKL 209 V + +GY E + + + + G + + Sbjct: 165 VSVSKNISQ-FGYAQEELMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIIT 223 Query: 210 ADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLE------EQLEHAAH 254 R V K + DI E+KR E +L A Sbjct: 224 KQKEVRWVDERTFVERDAAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLAT 276 >UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5T0_9GAMM Length = 1410 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 153/415 (36%), Gaps = 15/415 (3%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 T L+ P I++ Q+ Y N A + + E Sbjct: 603 TRLREVLNASPVPQGILNEV-GQVTYLNQAFITTFGYTLADIPTVNDWWQKAFPEKTHR- 660 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR--S 120 +Q + + ++ R + + +V + + + VI A AT Sbjct: 661 ETIQAEWQLHIEDSLNRSDTLKPVESDVVCKNGDK-KTVICNATHVASATDKHTLVILYD 719 Query: 121 ANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + ++K + + N A ++ G +VD N A GY+ E + K+ + Sbjct: 720 ISERKKAEERLKMSGRVFNQAHEGILITDAKGLLVDVNPAFSEITGYSREEVIGKNPSIL 779 Query: 180 NMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 + E+ GH + +G + + L + Sbjct: 780 QS-DKHSRVFFQEMWTSLEEKGHWQGEIWNLKKNGQLFAELLTISTLVDERGETLHYLGL 838 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT+ K + LE AH+D +T L NR F +++ +D D F Sbjct: 839 FSDITQSKEQQHALELMAHYDMLTQLPNRTLFADRFHQAIAHSKRNHSLLAVVFLDLDGF 898 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K +ND YGH GD++L +A+ +++ R+ D R GG+EFVLLL +D L Sbjct: 899 KPVNDRYGHDVGDQLLIEVAQRIKASIRQDDTASRLGGDEFVLLLNDISSVDHCERLINR 958 Query: 355 IRVSVAKVSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 IR ++ + S+G+ + + D L + D A+Y+AK GR R Sbjct: 959 IRHAIELPYQLDEDTISLSASLGITIYPLDDADADTLLRHADQAMYQAKLAGRQR 1013 Score = 71.3 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 11/144 (7%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + +S + + + P ++ + GQ+ N A + +GY + + Sbjct: 590 RLRKSGRALAQSETRLREVLNASPVPQGIL--NEVGQVTYLNQAFITTFGYTLADIPTVN 647 Query: 176 TWEINMLGRRV-MPIMHEISHLPGGH--------KPLNFVHKLADGSTRHVQTYAGPIEI 226 W + + L KP+ +G + V A + Sbjct: 648 DWWQKAFPEKTHRETIQAEWQLHIEDSLNRSDTLKPVESDVVCKNGDKKTVICNATHVAS 707 Query: 227 YGDKLMLCIVHDITEQKRLEEQLE 250 DK L I++DI+E+K+ EE+L+ Sbjct: 708 ATDKHTLVILYDISERKKAEERLK 731 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 357 bits (918), Expect = 4e-97, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 16/410 (3%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 LD + +++ ++ + N A + V + L+ Sbjct: 12 FQAILDRCPVGIAVIN-YDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDSVLA- 69 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 +++ + E T+ E T + V+ + G A + + Sbjct: 70 -RHRQFLDEGGTL--GGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVLDITERQKA 126 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 R++ A + + +++I+ SR I+ N A GY+ + + I R Sbjct: 127 REQMKIAAAVYESTQEAIIVINTSRS--IISINPAFTRLTGYSAADVVGQ-PSYIFRSDR 183 Query: 185 RVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDIT 240 + G + DGS + I+ + + DIT Sbjct: 184 HDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFSDIT 243 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 ++K+ E + A++DA+T L NR F E + +L+LID D FK +ND Sbjct: 244 QRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDHFKSVND 303 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVSV 359 GH GD +L A++ L C + D + R GG+EF ++L + + LA T+ + Sbjct: 304 SLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLARTLLAQL 363 Query: 360 AKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 A+ + SIG+A +++++ELFK D A+Y AK+ GRN Sbjct: 364 AQPFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNC 413 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 97/419 (23%), Positives = 172/419 (41%), Gaps = 25/419 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 N +L + VW + +Y+ ++ L+ + S +E + Sbjct: 671 RFRNVTELTSDWVWQID-QNGIYVYSGGKSRDLLGYEPEEVYGNTLFDFMSPEEG-ARVG 728 Query: 64 DL-------QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + Q +E + + + L V + IF+G + Sbjct: 729 AIFKKLTCEQKPFSFMENTILHKDGHQVILETSGVPLFSDDG----IFQGFFGTEHDITE 784 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 ++ + + + + + L+D + + + N A GY + + Sbjct: 785 RKQAKEALEESEYKFRTILDVAADGVCLVDK-QTRKFIQGNNAICKMLGYRDDEL----- 838 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVH------KLADGSTRHVQTYAGPIEIYGDK 230 +E+ + + E+ + + K +GS + I + G Sbjct: 839 YELGIEDIHPAEALAEVFLQFNKKRQGEIIVVPNIPVKRKNGSIFLADISSAAIILDGRT 898 Query: 231 LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLI 290 +M+ HD+TE+K++EE+++ A D++TG+ NRR F + SL++ Sbjct: 899 IMVGFFHDVTERKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMF 958 Query: 291 DTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS 350 D D FK +ND +GH GD+VL AL+ ++ R D+V RWGGEEF+LL+P + + A + Sbjct: 959 DIDYFKKVNDNFGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATA 1018 Query: 351 LAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 E +R ++ + TVS G+ NE KRVDDALY+AK GRNRV Sbjct: 1019 AIEKLRREISDFPFGQVGSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNRVEI 1077 Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 16/254 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDL-TFSQLRTGPYSVSSQKELPKYLSD-- 64 ++ + V+ + + N+ + + + ++ + + Y SD Sbjct: 547 IIEAIPMRVF-WKDQNLRFLGCNTLFAKDAGYIKPEELIGKNDFDMAWKDQADLYHSDDR 605 Query: 65 --LQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSA 121 + + + Q + + R L + I GI T + + Sbjct: 606 QVVDSGTPKLSFDEPQTTPDGRQIWLRTSKVPLHNDAHQSIGILGIYEMIT---EYKQLE 662 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 R+ + + S + ++G V + + + GY E + ++ Sbjct: 663 LKLRESEERFRNVTELTS--DWVWQIDQNGIYVYSGGKSRDLLGYEPEEVYGNTLFDFMS 720 Query: 182 LGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVH 237 RV I +++ + DG ++T P+ + H Sbjct: 721 PEEGARVGAIFKKLTCEQKPFSFMENTILHKDGHQVILETSGVPLFSDDGIFQGFFGTEH 780 Query: 238 DITEQKRLEEQLEH 251 DITE+K+ +E LE Sbjct: 781 DITERKQAKEALEE 794 Score = 81.3 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 80/268 (29%), Gaps = 23/268 (8%) Query: 7 NTLDLLTSPVWIVSPFEEQL--IYANSAAKLLMQDLTFSQLRTG-----PYSVSSQKELP 59 L+ L V+ E IY + + +++ Sbjct: 289 ALLNSLPIAVYRSR-AEGDFAMIYMSPNVLSFTDYEPKDFIEQSDLWLTRLHPDDAEKMT 347 Query: 60 KYLSDLQ-NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 + L + + E ++ + L + E + G+ T Sbjct: 348 SEMELLFEKEAHVYEYRWMRADGTYIWIQDSLRIIP-EEDGIPLHLAGMWQDIT---TRK 403 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLL--IDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 + RK++ Y T + P ++ + ++ N L GY + + Sbjct: 404 KVEEQLRKREFAYRTL--TQNLPGIVYRLFVDEGHRMEFYNEMVLQTTGYRADELTDSSI 461 Query: 177 WEINMLGRRVMPIMHEISHLPGG-HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML-- 233 + + R + + + + + K +G+ + Y P+ + L+ Sbjct: 462 KPLILDEDRPAVMAKVMLAVKEQCPFTVEYRLKHKNGTICWMVEYGMPVYEDRNVLLYID 521 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGL 261 ++ DIT++K EE +T L Sbjct: 522 GLIFDITDRKVAEEDSHKQQ---ELTNL 546 Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 85/258 (32%), Gaps = 15/258 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEE-QLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 L V+ + E ++ + N + + ++ P + Sbjct: 415 AYRTLTQNLPGIVYRLFVDEGHRMEFYNEMVLQTTGYRADELTDSSIKPLILDEDRPAVM 474 Query: 63 SDLQ---NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIF-EGIEAPATLGLKAS 118 + + + + + + T + E V+++ +G+ T A Sbjct: 475 AKVMLAVKEQCPFTVEYRLKHKNGTICWMVEYGMPVYEDRNVLLYIDGLIFDITDRKVAE 534 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTW 177 ++ Q++ + + PM + ++ + + N GY E + K+ + Sbjct: 535 EDSHKQQEL-----TNLIIEAIPMRVFWKDQNLRFLGCNTLFAKDAGYIKPEELIGKNDF 589 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFV--HKLADGSTRHVQTYAGPIEIYGDK--LML 233 ++ + + + + G L+F DG ++T P+ + +L Sbjct: 590 DMAWKDQADLYHSDDRQVVDSGTPKLSFDEPQTTPDGRQIWLRTSKVPLHNDAHQSIGIL 649 Query: 234 CIVHDITEQKRLEEQLEH 251 I ITE K+LE +L Sbjct: 650 GIYEMITEYKQLELKLRE 667 >UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZA4_DESAC Length = 556 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 89/405 (21%), Positives = 162/405 (40%), Gaps = 23/405 (5%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL---PKYLSDLQNQHDII 72 + ++ P + ++ AN AA L + + ++ + K Sbjct: 158 MMLIDPDDGSIVDANQAACLFYGYSHDQLTQRSLFDLNVDTDQAIQDKINQAYTGATPCY 217 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 + E + L+ TL N + + + Sbjct: 218 RVRHQLADGEIRTIEVFSGPIILS-------------DRTLLYSIIHDINERVQIEDHLR 264 Query: 133 RFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + +P ++ +RDG++ N + GY E + ++ + R Sbjct: 265 KITTAVEHSPASIVITNRDGRVEYVNQSFTRITGYTAEEVLGENPRVLRARPRPPAETRQ 324 Query: 192 -EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQ 248 + L G F ++ +G + + P+ + ++ + I DIT QK LE++ Sbjct: 325 MWQTILDGKIWRGLFYNQRKNGESYWEKAAIAPVLDHQHQISHFVAIKEDITRQKALEDK 384 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 + H AHHD++T L NR FY + +L+ +D D FK +ND GH GD Sbjct: 385 IWHQAHHDSLTDLPNRVLFYQYLGDVVLHAQRQDIGAALMFVDLDCFKEVNDSLGHDYGD 444 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA-LSLAETIRVSVAKVS--IS 365 +L +A+ L+ R+ D V R GG+EF +LL T + A LS+AE + + + Sbjct: 445 LLLQQVAKRLKDSVRQTDQVARIGGDEFTVLLCHTSDNQAILSVAEKVLNQLNRPFDLNG 504 Query: 366 GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + + SIG+A + + L ++ D A++ AK GRN+V+ A Sbjct: 505 HQAQISGSIGIARVCKGHTTETLVRQADHAMFAAKKAGRNQVIMA 549 Score = 82.5 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 2/172 (1%) Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 ++ +L + LR + I+ + + R AN + F + Sbjct: 96 RDSYLSLCSSVDLRAVMRGYFDILELSMCRLWSQVPARQRQANPSPLLEAADYPLFYNSH 155 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG 199 + M+LIDP DG IVDAN AA FYGY+H+ + Q+ +++N+ G Sbjct: 156 SMMMLIDPD-DGSIVDANQAACLFYGYSHDQLTQRSLFDLNV-DTDQAIQDKINQAYTGA 213 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 H+LADG R ++ ++GPI + L+ I+HDI E+ ++E+ L Sbjct: 214 TPCYRVRHQLADGEIRTIEVFSGPIILSDRTLLYSIIHDINERVQIEDHLRK 265 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 159/401 (39%), Gaps = 21/401 (5%) Query: 17 WIVSPFEEQLIYANSAAKLL---MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIE 73 W + A + +D ++ G Y S++++ + + + Sbjct: 211 WEFDVETGIGSWTREVAHIHGVEFKDNISAEFGLGFYEAESREKIEAAIQQAIDHGKPYD 270 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 + E ++ R + + + I +G + K Sbjct: 271 L-------ELELVTARGIRKWVRTVCTPHIIDGRVLKLQGSFQDISDRKVAEDKMRLATL 323 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F +S ++++ + QI+ N A GY + + K +I G++ E+ Sbjct: 324 VFENSSEAIMVV--DAESQILSVNPAFTEMTGYTAQEVVGKTP-KILASGKQDRKFYEEM 380 Query: 194 SHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQL 249 HL G ++ +G + I +++ + + DIT+ K+ +E + Sbjct: 381 WHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVI 440 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 A+ D +TGL NRR + ++ Q ++L +D DRFK +ND YGH GD+ Sbjct: 441 WRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQ 500 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP 368 +L A L R+ D V R GG+EFV++L D +A++I Sbjct: 501 LLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDND 560 Query: 369 --RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 +VSIG+ + + + LFK D A+Y AKN+GRNR Sbjct: 561 LTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNR 601 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 6/177 (3%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF-FLTNSAP 141 S + + L E + F+ ++ + L A+ + ++Q +R+ LT A Sbjct: 26 WIMASDQTLALLLPEAASITHFQTLKGLLFILLTAALLYHLIHRQQLLASRYNSLTVHAN 85 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK 201 ++ G++VDAN AL YGY + M H ++ ++ Sbjct: 86 DSILLFDHQGKLVDANDRALRMYGYTRDQMQHIHARQLL-PDAASDWRSCFLAEAQHNGI 144 Query: 202 PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH----AAH 254 HK ADGST V+ A ++I G + IV DITE+ R+ E+L AH Sbjct: 145 IFESEHKHADGSTFSVEVSACLLKIGGSDYIQAIVRDITERLRVVEKLRESEQLLAH 201 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 148/411 (36%), Gaps = 18/411 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 D + + Q + N A + P+ ++ + Sbjct: 557 RYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAIDPWELTPIRYQSSETE 616 Query: 64 DLQNQHDIIEILTVQ---RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L+ Q R ++ ++ RL +T + I T + Sbjct: 617 QLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGEQLILFIVEDITEQERTVAR 676 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 N + + + + + IVD N A GY+ + + K+ + Sbjct: 677 VNLLAQ---------VFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNCRFLE 727 Query: 181 MLG-RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVH 237 R + + G + +G + + Sbjct: 728 AERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFT 787 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DI+E+K EE++ AHHD++T L NR E + +++ ID D FK+ Sbjct: 788 DISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKN 847 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND GH GD +L +AR L++ D+V R GG+EFV++L T D +AE +R Sbjct: 848 INDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAEALRS 907 Query: 358 SVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + + + SIG++ +S++ L K D A+YRAK GRN Sbjct: 908 GLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRN 958 Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 55/167 (32%), Gaps = 8/167 (4%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANY-----QRKKQGFYARFFLTNSAPMLLIDPSR 149 L + A T+ L + + + + Y F L Sbjct: 517 LVSSGERHRIAEKVAEKTMALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRL-E 575 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPLNFVHK 208 DGQ V N A + GY E + WE+ + + E + P ++ Sbjct: 576 DGQFVAINQAFMEITGYTLEELQAIDPWELTPIRYQSSETEQLERLKQTRRYGPYQKHYR 635 Query: 209 LADGSTRHVQTYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLEHAAH 254 DG V+ + +L+L IV DITEQ+R ++ A Sbjct: 636 HKDGQLVAVRLNGSLVTAANGEQLILFIVEDITEQERTVARVNLLAQ 682 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 356 bits (914), Expect = 8e-97, Method: Composition-based stats. Identities = 86/416 (20%), Positives = 148/416 (35%), Gaps = 23/416 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + D + + AN L+ + + + + ++ Sbjct: 70 RYIDLYDFAPVG-YFTLDTNGLITEANLTGADLLGEARAKLVGRRFERYIAPVDRDRWHR 128 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + E + E + + + ++ +AP S Sbjct: 129 HALSLSRRGEPGRI-----ELLVQGAGGRSIHAQLDGLMARANHDAPLLRIALTDISERK 183 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + A M++ G I N A GY+ + + G Sbjct: 184 HAESELRLAATAFEAQEGMMI--TDAHGVIERVNKAFTQMTGYSAAEAIGQTAR-LLHSG 240 Query: 184 RRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 R + G ++ G ++ + + + DI Sbjct: 241 RHDPAFYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWLTITAVQDEHRTVTRYVGTMLDI 300 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 +++K EE++ A +D +TGL NRR ++ +LL ID D FK IN Sbjct: 301 SQRKAREEEIAQLAFYDPLTGLPNRRLLKDRLNQAMAISARSQREGALLFIDLDHFKDIN 360 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL-------PRTPLDTALSLA 352 D GH KGD +L +A+ L C R+GD V R GG+EFV++L A S+A Sbjct: 361 DTRGHDKGDLLLQNVAQRLSGCVREGDTVARIGGDEFVVMLGADLSTATDEAASHARSVA 420 Query: 353 ETIRVSVAKVSISGL--PRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 E I ++ + + S+GVA ++++DEL KR D A+Y+AK GRN Sbjct: 421 EKILAALNLPYLMSGEFVHCSASLGVALFNDHHDTVDELLKRADQAMYQAKAGGRN 476 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 3/162 (1%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIV 154 + E L ++ Q + R+ L + AP+ +G I Sbjct: 33 ERRAEAMAHELQVHRIELEMQNDELRRAQIALETARDRYIDLYDFAPVGYFTLDTNGLIT 92 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK-PLNFVHKLADGS 213 +ANL + G + + R H +S G + + + A G Sbjct: 93 EANLTGADLLGEARAKLVGRRFERYIAPVDRDRWHRHALSLSRRGEPGRIELLVQGAGGR 152 Query: 214 TRHVQTYAGPIE-IYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 + H Q + L+ + DI+E+K E +L AA Sbjct: 153 SIHAQLDGLMARANHDAPLLRIALTDISERKHAESELRLAAT 194 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 356 bits (914), Expect = 8e-97, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 172/393 (43%), Gaps = 18/393 (4%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSV---SSQKELPKYLSDLQNQHDIIEILTVQRKEE 82 ++Y N A + + + P + + +++ + + ++ E TV + + Sbjct: 70 IVYVNPAFCAMTGYAAEALIGLSPRILQGPDTDRQVIERMRQCLSESLFFEGSTVNYRAD 129 Query: 83 ETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 + + + + V F ++ + ++A R + N+A Sbjct: 130 GSPYVVEWKISPVRDDAGAVCNFVSVQQNISPRIRAER---------EQHLLAQALNAAL 180 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGG 199 ++ + IV AN A + GY+ + ++ + G+ + + G Sbjct: 181 DPIMITDCNATIVFANEAFQHITGYSASEIIGENPRVL-SSGKHDEMFYAQFNEALASGT 239 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDA 257 F++K DGS + + P+ + + I D+T + E++L AH D Sbjct: 240 PFRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDP 299 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TGL NRR H E + +SL++ D D FK +ND YGH GD VL ++A Sbjct: 300 LTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVI 359 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVA 377 L+ R D+ RWGGEEF++L+P + LD A LA+ IR V + I T+S+GVA Sbjct: 360 LKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTGSVTISLGVA 419 Query: 378 HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 E+ L +R D ALY+AK GRNRV A Sbjct: 420 QLSPGETAASLIQRADKALYQAKRRGRNRVDIA 452 Score = 40.9 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 45/166 (27%), Gaps = 21/166 (12%) Query: 14 SPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY---LSDLQNQHD 70 P+ I + +++AN A + + + P +SS K + ++ Sbjct: 181 DPIMI-TDCNATIVFANEAFQHITGYSASEIIGENPRVLSSGKHDEMFYAQFNEALASGT 239 Query: 71 IIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANY------ 123 + ++++ + + L + + I T L + Sbjct: 240 PFRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDP 299 Query: 124 ------QRKKQGFYARFFLTNSA---PMLLIDPSRDGQIVDANLAA 160 +R + R T P LI D N Sbjct: 300 LTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDID-HFKSVNDRY 344 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 11/285 (3%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 F ++ +++ +I+ N A GY+ E + K+ + G Sbjct: 17 IAKNIFEYSNESIII--TDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQS-GMHDKQF 73 Query: 190 MHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL 245 ++ + G +K DG ++ + + + DITE KR Sbjct: 74 YKKMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRN 133 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 EQL A +D +T + NR E Q ++LL +D DRFK+IND GH Sbjct: 134 VEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHR 193 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS- 363 GD +L A+ L+ RK D + R+GG+EFV++LP + A +AE I S+ + Sbjct: 194 VGDMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFC 253 Query: 364 ISG-LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + + SIG++ + + L + D A+Y+AK +GRN+ Sbjct: 254 FNHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQ 298 >UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2Q6_9PROT Length = 564 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 12/319 (3%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLA 159 + + L ++ + + + S ++ + IVD N A Sbjct: 240 PLDERNQDEIGKLARTFNQMSESLYNSEKSMRLASSIYQSNADAIVVTDENNLIVDVNPA 299 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHV 217 GY + + K+ + G+ + ++ + GH K DG Sbjct: 300 FTRITGYTLDEVRGKNPR-LMQSGQHDIQFYRKMWRAIIDQGHWQGEIWDKRRDGGLYAK 358 Query: 218 QTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 + + + DITE+K+ +E + A++D +T L NRR F Sbjct: 359 SVNIIALRHQDGSIYRFVAQFSDITEKKQKDELIHWQANYDPLTNLPNRRLFQDRLNQAI 418 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 +L ID D FK IND GH+ GD +L +AR + SC R+ D V R GG+E Sbjct: 419 KLAHRTELPLALFFIDLDYFKEINDTLGHANGDVLLMEVARRISSCVREADTVARLGGDE 478 Query: 336 FVLLLPRT-PLDTALSLAETIRVSVAKVSI----SGLPRFTVSIGVAHHE-GNESIDELF 389 F ++LP L +A+ I +++ + SIG+A++ L Sbjct: 479 FTVILPELSDATQILRVAKNIVDKLSQPFFFVNDETGYHVSASIGIANYPQDAMDTKGLI 538 Query: 390 KRVDDALYRAKNDGRNRVL 408 K D A+Y AK++GRNR + Sbjct: 539 KCADKAMYAAKSEGRNRFV 557 >UniRef50_C6P417 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P417_9PROT Length = 961 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 82/410 (20%), Positives = 148/410 (36%), Gaps = 17/410 (4%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 ++ + P+ + + +N +A+ ++ + + L Sbjct: 549 IEAIPDPI-QFKDGAGRWLESNQSARQAFGLGEVDCAGKTDRELAEIADPHYRDALLHCH 607 Query: 69 HDIIEILT---VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 E + R EE L + +P+ EG + R + Sbjct: 608 ETDEEAWRKDGISRVEEIIPLPDGGEMTFDVIKKPLFHEEGRRKGLVI---IGRDITELK 664 Query: 126 KKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 + + + +++ ++ D IV+ N A GY+ + ++ + G Sbjct: 665 QAEAGLRITASVFDNSQEAIVITDADNIIVNVNPAFTQITGYSRAEVLGRNPG-LLSSGH 723 Query: 185 RVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDIT 240 + + G ++ G I + + + DIT Sbjct: 724 QDKAFYAAMWASLKREGAWRGEIWNRRKSGEIYAELLSISVICDDAGNVQRHVAVFSDIT 783 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 K E +L H A+HDA+TG+ NRR + ++ ID D FK +ND Sbjct: 784 YFKEHEAELSHVANHDALTGIPNRRLLSDRLGQAIAHAQRSGKTLAICYIDLDGFKDVND 843 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVSV 359 YGH GD +L + R L+ R GD + R GG+EFV+L + + + E I ++ Sbjct: 844 RYGHETGDMLLVDITRRLQDVLRAGDTLARLGGDEFVVLFNDLSQELECIQVLERIVQTI 903 Query: 360 AKV--SISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 A + S+GV + +E D L + D A+Y AK G+NR Sbjct: 904 AMPVWFEERSIAVSASVGVTCYPADDEEGDTLLRHADQAMYVAKKAGKNR 953 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 79/261 (30%), Gaps = 20/261 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY----LS 63 +D + VW+ + + N + L + Y +++ + L Sbjct: 274 FIDTIPDLVWL-KDADGLYLACNRRFEALYGASEKDIIGKTDYDFVRREQADAFRKHDLK 332 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + ++ + L + +I G+ T + S+ Sbjct: 333 AMAEDQSSANEEWLEFADGSRGLFETIKTPMRDNQGQLIGVLGVARDITRRKQTSQLLED 392 Query: 124 QRKKQG--------FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQK 174 R + + + + +I +DG AN L+ +G+ + E + Sbjct: 393 YRSRLEGLVAEESTKFRALVEQSLVGIYII---QDGFFRYANPGLLDMFGFDSAEELVDV 449 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGH---KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 + + I G +F DGS V + IE G Sbjct: 450 VPAIQLVKTEDKPLVEENIRRRLEGEADATRYSFTAYKRDGSMIVVDAHGRRIEYQGRPA 509 Query: 232 MLCIVHDITEQKRLEEQLEHA 252 ++ + DI+E +R +E+L Sbjct: 510 IIGTLVDISEMRRSKEELMRL 530 Score = 87.5 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 76/271 (28%), Gaps = 28/271 (10%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 T ++ ++I+ + YAN + + +L ++ K K L Sbjct: 406 TKFRALVEQSLVGIYII--QDGFFRYANPGLLDMFGFDSAEELVDVVPAIQLVKTEDKPL 463 Query: 63 ------SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 L+ + D K + + + R++ I + + + Sbjct: 464 VEENIRRRLEGEADATRYSFTAYKRDGSMIVVDAHGRRIEYQGRPAIIGTLVDISEMRRS 523 Query: 117 ASRSAN-------YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE 169 R+ + + P + G+ +++N +A +G Sbjct: 524 KEELMRLVEEKSARLRQNEEMLRTLIE--AIPDPIQFKDGAGRWLESNQSARQAFGLGEV 581 Query: 170 TMCQKHTWEINMLGR--------RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA 221 K E+ + E G + + L DG Sbjct: 582 DCAGKTDRELAEIADPHYRDALLHCHETDEEAWRKDGISRVEEII-PLPDGGEMTFDVIK 640 Query: 222 GPIEIYGDK--LMLCIVHDITEQKRLEEQLE 250 P+ + ++ I DITE K+ E L Sbjct: 641 KPLFHEEGRRKGLVIIGRDITELKQAEAGLR 671 Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 6/178 (3%) Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 T+ E L + + E T + + + F F Sbjct: 217 TINEAAELMLARKVRHLVLVDSAGRMAGLVS-EHDLTQTMASGLMEEKFEVDELFLRTFI 275 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 ++ P L+ DG + N YG + + + K ++ + H++ Sbjct: 276 --DTIPDLVWLKDADGLYLACNRRFEALYGASEKDIIGKTDYDFVRREQADAFRKHDLKA 333 Query: 196 LPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLE 250 + + ADGS +T P+ +L+ L + DIT +K+ + LE Sbjct: 334 MAEDQSSANEEWLEFADGSRGLFETIKTPMRDNQGQLIGVLGVARDITRRKQTSQLLE 391 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 80/413 (19%), Positives = 153/413 (37%), Gaps = 24/413 (5%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD-- 64 + D + +W+ + + N A + + + + ++ + Sbjct: 403 SVFDNIPDLIWLKNTA-GVYLTCNRAFENFFDLEENRIIGKTDAGLPTDRQADMLRPEGS 461 Query: 65 ---LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 + + +++E + + + T +I GI T Sbjct: 462 RIIEEGKPEVMEQWVTNVQTGKRVFFDVIKAPVKTPDGRLIGVLGIARDIT--------- 512 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + ++ + ++ ++ + +I+ N A GY + K +I Sbjct: 513 RRKEDEEKLQLAALVYKNSSEAILITNAKNEILAVNPAFERITGYTPAEIMGKDP-KILS 571 Query: 182 LGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVH 237 GR+ + G G ++ +G + + + + + Sbjct: 572 SGRQDKAFYKAMWDALGKKGFWRGELWNRKKNGEVYLAWLTINVVYNEDGSVRYYVELSN 631 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 D TE+K E+ + A+ D +TGL NRR + ++ + +LL +D D FK Sbjct: 632 DFTEKKEAEDMIWRQANFDFLTGLPNRRMLLDRLQQEIVKVNQSGKKLALLFLDLDNFKD 691 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIR 356 +ND GH GD +L +A L C R+ D V R GG+EF ++L L A ++ + + Sbjct: 692 VNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEFAVILTELSDLRIAETVTQCML 751 Query: 357 VSVAKVSISGLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 S+A+ + SIG+ + I+ L K D ALY AK GRNR Sbjct: 752 RSLAQPYRLDGEIAYLSASIGMTVYPDDGTGIETLQKNADQALYAAKQAGRNR 804 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 10/170 (5%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 L + +L E ++ + ++ + + F ++ P L+ + Sbjct: 360 LFMVRLQEMRNQLLLNLEKRVEERTEDLNKVNAVLAQSEARLKSVF--DNIPDLIWLKNT 417 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH---EISHLPGGHKPLNFV 206 G + N A NF+ + K + + R ++ G + + Sbjct: 418 AGVYLTCNRAFENFFDLEENRIIGKT--DAGLPTDRQADMLRPEGSRIIEEGKPEVMEQW 475 Query: 207 HKL-ADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAA 253 G P++ +L+ L I DIT +K EE+L+ AA Sbjct: 476 VTNVQTGKRVFFDVIKAPVKTPDGRLIGVLGIARDITRRKEDEEKLQLAA 525 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 80/332 (24%), Positives = 126/332 (37%), Gaps = 11/332 (3%) Query: 85 ALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL 144 + + + + + A + +S M++ Sbjct: 311 VYHQHIDAFDGESIALLDEMSRDISFSLDNFDREVQRKAAEQSLQLAASIYENSSEGMMI 370 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKP 202 D I+ N A GY E + K+ I GR M + + L G Sbjct: 371 --TDADNLIMAINPAFTRITGYAMEDVIGKNPG-ILKSGRHDMDFYQAMWNEILGTGKWI 427 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 + G + K + + DI+++K EE + A+ D +TG Sbjct: 428 GEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIALFTDISQKKESEELIWRQANFDHLTG 487 Query: 261 LLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLES 320 L N R F+ E + + +++ +D D FK +ND GH+ GD +L A L S Sbjct: 488 LPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLDHFKEVNDTMGHATGDLLLKEAALRLSS 547 Query: 321 CARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP--RFTVSIGVA 377 C R+ D V R GG+EF LLL D+ + E I + G +VSIGV Sbjct: 548 CVRESDTVARLGGDEFALLLGELSDQDSIERVNECILNKFSAPFQLGNELAYISVSIGVT 607 Query: 378 HHEGNES-IDELFKRVDDALYRAKNDGRNRVL 408 + + + I+ L + D A+Y AKN GRNR Sbjct: 608 IYPSDATEIEALLRNADQAMYAAKNSGRNRSC 639 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 81/404 (20%), Positives = 144/404 (35%), Gaps = 19/404 (4%) Query: 11 LLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN--Q 68 ++ W + L +++ + + Q Sbjct: 257 IVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEVFLEHVHADDRDLVNRTWQQALL 316 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 +I E + G T Y++++ Sbjct: 317 RQPYDIEHRILVNGEIRWVREKANLDFDAHGNAVYAIGTVRDIT---------RYKQEEA 367 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + +S+ ++ + ++V N + + GY E + K+ + GR Sbjct: 368 TLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRML-SSGRHDAE 426 Query: 189 IMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR 244 + G+ K G + K+ + I D TEQ Sbjct: 427 FYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYISIARDTTEQTE 486 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 E+ + A++D +TGL NR +SL+ +D DRFK+IND GH Sbjct: 487 AEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGH 546 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 S GD +L ++A ++ C R+GD V R GG+EF++LL A +A+ + +++A Sbjct: 547 SVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYD 606 Query: 365 SGLPRFT--VSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 + SIG++ + + D L K D A+YRAK +GRN Sbjct: 607 LDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRN 650 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 102/420 (24%), Positives = 170/420 (40%), Gaps = 22/420 (5%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE----LPK 60 + D +W P + ++ A+ ++ + P+ ++ + Sbjct: 357 FMDVADAAGEFIWETGP-DGSFVFVTGRAEDVLGYSAEELIGRSPFDFVDEEYSWDVRKE 415 Query: 61 YLSDLQ--NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 +L Q N + + V R + L V V F G + + Sbjct: 416 FLDAAQFGNSFNGLVFRFVNRDGRKIWLEFNGVPVF-DAEGVVTGFRGATSDISAQ---K 471 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 ++ + ++ ++S L+ G + N AA +GY + M + Sbjct: 472 KALQDLQDREDMLQSI--SDSVQDALVLMDEKGLVHFWNPAAEKIFGYRADEMLGESLQC 529 Query: 179 INMLGRRVMPI-----MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 ++P + I L + + G + P+ ++ Sbjct: 530 CFHAEDNLLPENLGNTDNYIDGLLSSYGSFTVNVRRKGGDVFPAEVLLSPLRKDDQWWVV 589 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 D+TE+K E++L A D++TGL NRR F E + +D SLL++D D Sbjct: 590 GTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDID 649 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 FK +ND+YGH GD+VL L++T R D+ R GGEEF +LLP T LD A +AE Sbjct: 650 YFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAE 709 Query: 354 TIRVSVAKVSI---SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLA 409 +R + + SG TVSIGVA + + ++++L K D LY AK GRN+V Sbjct: 710 RLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVKV 769 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 90/406 (22%), Positives = 153/406 (37%), Gaps = 18/406 (4%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 D LT ++I+ ++++ N A + + +V + L + + Sbjct: 863 FDTLTDFIFILDQA-GRILHYNRAVAEDLGYGQNTLKGKTIAAVHPEN-----LRQIAEE 916 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 + I + L + ++G A + S ++Q Sbjct: 917 VTVDIISGRRYSCPLPILCASGEQIMVETRVVNGYWDGQPALIGISQDISERL-MAEERQ 975 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 A F +++ G I++ N GY+ + G Sbjct: 976 QLAASVFDNAHEGIMI--TDPKGNILEVNATFTELTGYSRAEALGNTPDMLKS-GHHDPA 1032 Query: 189 IMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR 244 E+ G+ ++ G Q + L + I DIT K+ Sbjct: 1033 FYEEMWQKIRDDGYWRGEIWNRKKSGEIFVEQLTISSVRNRDGALSNFVAIFSDITLLKQ 1092 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 +++LEH AH DA+T L NR + + Q + ++ +D D FK IND YGH Sbjct: 1093 HQQRLEHLAHFDALTQLPNRMLLSDRMQLAKAQAERSGKTLAVCYLDLDNFKPINDRYGH 1152 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVS 363 S GD +L +A+ L++C R GD V R GG+EFVLL+ L+ + ++++ Sbjct: 1153 SVGDFLLIEVAQRLKTCVRAGDTVARLGGDEFVLLITNLDDLNECDHAMTRVISALSQPF 1212 Query: 364 ISGLPRFTV--SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 TV SIGV + D L + D ++Y AK +GRNR Sbjct: 1213 RVSAQFVTVSASIGVTLYPHDGSDSDTLLRHADQSMYAAKQEGRNR 1258 Score = 81.7 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 10/190 (5%) Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 H I + V L L + + + +A + + + Sbjct: 220 DHGIRHLTVVDSDGNLAGLLSEHTLMSPLKLG---LIDDALIDRQALARAREAMLDETAR 276 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 Y R L ++ P L+ + +++ AN A G +++ K E+ Sbjct: 277 NERYQRALL-DNFPFLVWLKDTESRLLTANRAMAKAAG--SDSVIGKTDRELWPPELASA 333 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRL 245 +++ + + + DG T +TY P+ L+ + DI+E+KR Sbjct: 334 YRADDLAVMASRQNKIVVEPIIVDGQTVWHETYKAPVIADDGTLLGTVGFARDISERKRA 393 Query: 246 EE--QLEHAA 253 EE QL + A Sbjct: 394 EEAMQLRNQA 403 Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 26/190 (13%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L ++ S+ + + F +S L D + +D N +A +G + ++ Sbjct: 551 ALVIERQNSSQDLERSLATFRGIF--DSIGEALFIQGEDRRFLDVNTSAEQMFGLSRASL 608 Query: 172 CQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + + G + + + + L G + + + + ++ +G Sbjct: 609 IGQTHESLIAPGMLDLEAIDQAISTALAGTPQAFETLARSSTERIFPIEVRLHTASYFGR 668 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH-LAIAQDYSLL 288 +++ DI+E+K E +LE HD +LL Sbjct: 669 PVLIASAVDISERKNAELRLEV--EHD--------------LAQALASGMQRDEVLGALL 712 Query: 289 -----LIDTD 293 D D Sbjct: 713 KAIQRFPDLD 722 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 3/154 (1%) Query: 100 PVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 ++ E + + L + R+ Q + F T + + + G+I+ N A Sbjct: 828 TLLSLEKLSGQFSQALHRLAAQEEARRLQENLSGLFDTLT--DFIFILDQAGRILHYNRA 885 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQT 219 GY T+ K ++ R + + + G A G V+T Sbjct: 886 VAEDLGYGQNTLKGKTIAAVHPENLRQIAEEVTVDIISGRRYSCPLPILCASGEQIMVET 945 Query: 220 YAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 G ++ I DI+E+ EE+ + A Sbjct: 946 RVVNGYWDGQPALIGISQDISERLMAEER-QQLA 978 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 150/399 (37%), Gaps = 11/399 (2%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT 76 W + + + N+ + + + H + Sbjct: 182 WEWNVRTGE-AHLNTRWAATLGYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGES 240 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 + E + + V+ + P + + + + + Sbjct: 241 DAYQCEVRMRHKEGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQAASV 300 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS-- 194 A ++ +G I +ANLA GY+ + ++ I G E+ Sbjct: 301 FEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPR-IFSSGHHDDQYFAEMWKS 359 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHA 252 G+ ++ DG I+ +L + + DIT K+ ++QLE Sbjct: 360 LSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITALKKQQQQLEKI 419 Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 AH+DA+TGL NR + +Q + ++ D D FK +ND +GHS GD++L Sbjct: 420 AHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTHGHSIGDKLLI 479 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISG--LPR 369 LA + R+GD + R GG+EFV++L + +L + E + +++K Sbjct: 480 ELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAISKPIFMNHTEIC 539 Query: 370 FTVSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNR 406 + SIG+ + + D+L ++ D A+Y AK G+NR Sbjct: 540 VSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNR 578 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 +L+ G+I+DAN AA FYGY T+ +IN L + +++ G + Sbjct: 1 MLLIDPSSGKIIDANPAAATFYGYGRSTLRAMSIQQINTLTPEQVKEERKLAKSQGRN-Y 59 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 F H+LA G R V + P G L+L +++DIT + ++ L H Sbjct: 60 FIFRHELASGDIRTVAVQSNPFSFSGKTLLLSVINDITPGRHDDQALWH 108 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 160/396 (40%), Gaps = 11/396 (2%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT 76 ++++ + +L D +++ G + + K L+N+ + Sbjct: 285 YLLNFKTGIWTSSEILDELFGIDQSYNHSTEGWTLIVHPDDRIKMDDYLKNE---VLAKG 341 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 +E + + + F+ P + +R Sbjct: 342 KPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPVKMVGTVQDITEQKRASDSLLKLSLA 401 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH- 195 +P ++ DG+I N + GY+ + + ++ I G+ E+ Sbjct: 402 VEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPR-ILKSGKTPQTTFKEMWAH 460 Query: 196 -LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHA 252 G +++ D S P++ K+ + I DITE+K+ E E+ Sbjct: 461 LTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAEAYTENL 520 Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 A+ D +TGL NRR + + Q +++ +D D FK+IND GH+ GD+VL Sbjct: 521 AYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLI 580 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI--SGLPRF 370 +A+ ++ R+ D V R GG+EF++L P T + A+ +A T+ ++K S+ Sbjct: 581 KIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTI 640 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T SIG+A + L K + A+YR KND RN Sbjct: 641 TPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRN 676 >UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BII0_9PROT Length = 662 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 98/409 (23%), Positives = 172/409 (42%), Gaps = 13/409 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + ++I E+ IY N A + P+SV + + + + Sbjct: 261 KFRKIAETSLMGIFIYK---ERFIYVNEAFVDMSGYTINELYEIDPWSVVDKSQR-ETVR 316 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + N+ E + + R + I +E A + + Sbjct: 317 AIANRRLKGE-EFPRVYSDFKVNRKDGECRIMRVMTQTIKYEDSYAGLGTIMDIT-DIRE 374 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 K A+ ++ ++G I N A + GY + K G Sbjct: 375 TEDKLKVLAQAIE--QTDEMVRITDKNGVITFVNDALVAHTGYKPLELIGKKINMFKS-G 431 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 + E+ L G F+++ D + + + PI + + DI Sbjct: 432 KHDNAFYKEMWEIILSGKTYRGVFINRKKDKNIFYEEETITPIFDSKKNIQNFVATSQDI 491 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 TE+ +E +L+ A D++TG+ NR + E + ++++L++ D D FK +N Sbjct: 492 TERIEMENKLQKLATIDSLTGIYNRHKTNEEIEIQLAKAKRYDEEFALVMFDIDHFKDVN 551 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSV 359 D YGH GD++L + + R+ D RWGGEEF+LLLP+ D A+ +A+ IR V Sbjct: 552 DTYGHDAGDDILKEFSDVVLKHIRESDRFGRWGGEEFMLLLPKVDKDEAIRVADKIREFV 611 Query: 360 AKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408 ++ + L R TVS+G + + N++ + L KR D+ALY+AK+ GRNRV+ Sbjct: 612 SRYPFNKLSRITVSVGASIYRENDTKESLLKRTDEALYQAKSSGRNRVI 660 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 85/256 (33%), Gaps = 19/256 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 LD S ++I Y N A + + P + + + +L ++ Sbjct: 139 ILDNSNSELFIFDTDTLHFTYLNKKALKHIGYSFEEMQKMTPVDIKPEYTMSNFLRLIKR 198 Query: 68 Q------HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 H + E + + E + RL L L + ++F + +S Sbjct: 199 LENGETGHFVFETVHQCKNGELYNVEIRLELMTLENKKQFVVFAH------DITERKKSL 252 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ + + + T+ + + + + N A ++ GY + + W + Sbjct: 253 IQLQESEEKFRKIAETSLMGIFIY----KERFIYVNEAFVDMSGYTINELYEIDPWSVVD 308 Query: 182 LGRRVMPIMHEISHLPGGHKPL---NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +R L G P +F DG R ++ I+ L + D Sbjct: 309 KSQRETVRAIANRRLKGEEFPRVYSDFKVNRKDGECRIMRVMTQTIKYEDSYAGLGTIMD 368 Query: 239 ITEQKRLEEQLEHAAH 254 IT+ + E++L+ A Sbjct: 369 ITDIRETEDKLKVLAQ 384 Score = 97.5 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 99/275 (36%), Gaps = 20/275 (7%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYA--NSAA---KLLMQDLTFSQLRTGPYSVSSQK 56 I ++D L V I ++ I+ N +A + ++ + T + + Sbjct: 6 ILKINISIDELPDNVVIYRYEDDDFIFVDLNKSAQKTENTSKEKIIGKKLTEIFPGVKKF 65 Query: 57 ELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 L L + E+ +++ + +RKL+ + ++ ++ + +L + Sbjct: 66 GLYDLLLKVNRDGGSQELDMRFYEDKRISGWRHNSIRKLSNGDLIVFYKDLNEYKSLEDE 125 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 +R N + +++ + + D N AL GY+ E M + Sbjct: 126 TNRKTNELKS----LGHILDNSNSELFIFDTD-TLHFTYLNKKALKHIGYSFEEMQKMTP 180 Query: 177 WEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 +I + ++ + + GH VH+ +G +V+ + + K + Sbjct: 181 VDIKPEYTMSNFLRLIKRLENGETGHFVFETVHQCKNGELYNVEIRLELMTLENKKQFVV 240 Query: 235 IVHDITEQK-------RLEEQLEHAAHHDAMTGLL 262 HDITE+K EE+ A ++ G+ Sbjct: 241 FAHDITERKKSLIQLQESEEKFRKIAET-SLMGIF 274 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 85/384 (22%), Positives = 141/384 (36%), Gaps = 22/384 (5%) Query: 40 LTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLV----LRKL 95 ++ S + + +L + IE R+ E A L LR++ Sbjct: 87 ISESLEAGAIDLIHKEDPKEVFLMRVAAMGRFIETQNAHREAEAHARQKELQAAEQLRRI 146 Query: 96 TETEPVIIFEGIEAPATLGLKASRSAN-------YQRKKQGFYARFFLTNSAPMLLIDPS 148 E + + + +++ + + F S +I Sbjct: 147 EEQARQQLEQRVRERTLELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSE--AIILTD 204 Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFV 206 G I+D N A G++ E + R + G Sbjct: 205 PQGMILDINPAFTEITGFSREEALGHNPRSFKS-DRHDATFYTNMWRKIAEEGFWQGEIW 263 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNR 264 + +G + + ++ + I DI+E K E +LE A++DA+T L NR Sbjct: 264 DRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNR 323 Query: 265 RQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARK 324 F+ E + ++ ID DRFK +ND GHS GDE+L +A+ LE C R Sbjct: 324 MLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRA 383 Query: 325 GDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHEG 381 D V R GG+EF ++L ++ +A + + K SIG+A + Sbjct: 384 ADTVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPD 443 Query: 382 -NESIDELFKRVDDALYRAKNDGR 404 ++ L K D A+YRAK GR Sbjct: 444 NGNDVETLTKNADMAMYRAKESGR 467 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 77/419 (18%), Positives = 155/419 (36%), Gaps = 27/419 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLR------TGPYSVSSQKE 57 + W + + + + ++ + ++ Sbjct: 702 QLARVIAGSDQGFWDWNLETNRFQ-VSPRWESMLGYGPGEMHITADSWYEHVHPEDVERT 760 Query: 58 LPKYLSDLQNQ--HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 +L + +EI R + + R + + + + G T Sbjct: 761 RDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVERNDRGEPLSMSGTHTDITERK 820 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 ++ + +S+ ++ + DG I N A GY+ E + Sbjct: 821 VFEQTQKEAAA---------VFDSSYEGILMVNPDGVITKVNNAFSRITGYSAEEAIGQK 871 Query: 176 TWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDK--L 231 + G++ + E+ + GH ++ G + + Sbjct: 872 PS-LLASGKQPISFYEELWNSVKGHDFWRGELWNRRKSGELYAELLSISVVRDEQGQVQH 930 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + I DIT+ K+ E +L+ AH+D +TG+ NRR ++ + ++ +D Sbjct: 931 YIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIVRANRSGRSCAVCFLD 990 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALS 350 D FK +ND YGH+ GD++L ++ L+S R D + R GG+EFV+LL + + Sbjct: 991 LDGFKAVNDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGGDEFVVLLSEVGSPEECML 1050 Query: 351 LAETIRVSVAKVSISG--LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 + + + + ++ G T SIGV+ + + D L + D A+Y AK+ G+NR Sbjct: 1051 VLDRVLATASRPMPVGDAEVGVTASIGVSLYPQDNVDPDTLLRHADQAMYLAKDAGKNR 1109 Score = 94.8 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 77/242 (31%), Gaps = 10/242 (4%) Query: 10 DLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD-LQNQ 68 + + W ++ +++ T + +G + Q P L LQ Sbjct: 465 EATSDGFWDWDLRSGKV---YRSSRYYEVTGTQPEDDSGDFRFFRQMVHPADLPYVLQAI 521 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 T + + + +R L + ++ A L S +R + Sbjct: 522 EAHRRGKTPRIEIDFRLARQDEGVRWLQARGRAVEWDERGAAVRLVGNLSDITERKRADE 581 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + N A + DG + AN AA G++ + + + H ++ + Sbjct: 582 DLR---LVLNEAGDAIWVTDVDGYFIFANPAACRLTGHSLDDLREMHIHDLVAPECLGLL 638 Query: 189 IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQ 248 H G + +L T V +G ++ + D+TEQ R E++ Sbjct: 639 AEHLAKINNGAFLRSEWKLRLKKSGTVSVDLTSGKMKDG---RYIAFGRDLTEQHRAEQE 695 Query: 249 LE 250 L Sbjct: 696 LR 697 Score = 91.7 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 82/261 (31%), Gaps = 22/261 (8%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQK---ELPKYLSD 64 L+ +W+ + + I+AN AA L + + + + L ++L+ Sbjct: 586 VLNEAGDAIWV-TDVDGYFIFANPAACRLTGHSLDDLREMHIHDLVAPECLGLLAEHLAK 644 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 + N + ++ K+ T + T + A + R+ Sbjct: 645 INNGAFLRSEWKLRLKKSGTV--------SVDLTSGKMKDGRYIAFGRDLTEQHRAEQEL 696 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM-CQKHTWEINMLG 183 R ++ AR + D + + + + GY M +W ++ Sbjct: 697 RDRERQLARVIAGSDQGFW--DWNLETNRFQVSPRWESMLGYGPGEMHITADSWYEHVHP 754 Query: 184 RRVMPIMHEISHLPGGH---KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL---MLCIVH 237 V I G + + G R + + +E M Sbjct: 755 EDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVERNDRGEPLSMSGTHT 814 Query: 238 DITEQKRLEE-QLEHAAHHDA 257 DITE+K E+ Q E AA D+ Sbjct: 815 DITERKVFEQTQKEAAAVFDS 835 Score = 77.5 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 21/264 (7%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 + + TS V + + + N AA + + + V ++ + + Sbjct: 206 LDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGEVIGKDDRDVFDEETARE---LI 262 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVI----IFEGIEAPATLGLKASRSA 121 I++ VQ EE AL + L PV + G+ + + ++ Sbjct: 263 IQDRLIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEGLLGGLFGISRDITRQKQAE 322 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT---WE 178 N R + + D D Q + A +G ++ + Sbjct: 323 NQLRDSEAMLQQAQQLAGIGSWSWDLVDDRQ--SWSPEAYRLFGLTEKSGPPGYPAMRRY 380 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 + G + E L G + ADG +R + ++ + Sbjct: 381 FDADGWAQLSEAVERCKLVGMGYECDVELLRADGESRWLTMRGEARRDEEGAIVSLYGTM 440 Query: 237 HDITEQKRL-------EEQLEHAA 253 DITE+KR+ E +L+ A Sbjct: 441 QDITERKRMAMQVKASESRLQLVA 464 Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 5/137 (3%) Query: 119 RSANYQRKKQGFYARFFL--TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 ++ + +S + G+ + N AAL F G + K Sbjct: 190 EMLRQALERVALHRALLDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGEVIGKDD 249 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKP-LNFVHKLADGSTRHVQTYAGPIEIYGD--KLML 233 ++ I+ + + G L +G GP+ + + Sbjct: 250 RDVFDEETARELIIQDRLIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEGLLGGLF 309 Query: 234 CIVHDITEQKRLEEQLE 250 I DIT QK+ E QL Sbjct: 310 GISRDITRQKQAENQLR 326 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 72/264 (27%), Gaps = 25/264 (9%) Query: 2 ITHNFNTLDLLTSPVW-IVSPFEEQLIYANSAAKLLMQDLTFS-----QLRTGPYSVSSQ 55 + L + S W +V + + A L S + Sbjct: 331 MLQQAQQLAGIGSWSWDLVDDRQS----WSPEAYRLFGLTEKSGPPGYPAMRRYFDADGW 386 Query: 56 KELPKYLSD--LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATL 113 +L + + L ++ ++ E L+ R R+ E ++ G T Sbjct: 387 AQLSEAVERCKLVGMGYECDVELLRADGESRWLTMRGEARR-DEEGAIVSLYGTMQDIT- 444 Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 + R A + + S D V + G E Sbjct: 445 --ERKRMAMQVKASESRLQLVAEATS--DGFWDWDLRSGKVYRSSRYYEVTGTQPEDDSG 500 Query: 174 --KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGD 229 + ++ + +H G + + D R +Q +E Sbjct: 501 DFRFFRQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLARQDEGVRWLQARGRAVEWDER 560 Query: 230 ---KLMLCIVHDITEQKRLEEQLE 250 ++ + DITE+KR +E L Sbjct: 561 GAAVRLVGNLSDITERKRADEDLR 584 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 86/411 (20%), Positives = 158/411 (38%), Gaps = 17/411 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 ++ VW + ++ Y+ ++L D ++ + Y+ Q Sbjct: 291 AIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENELLPTNQEWADRVHHDDVAYVK--QT 348 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 D +E T E + + ++ + P + + ++K Sbjct: 349 MQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRDDQGNPLRMIGTHT-DITERKKI 407 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + + ++ + + I+ N A ++ GY E K I GR+ Sbjct: 408 EQQLRIAATAFESQEGIVVTNENFNILRVNQAFIDITGYEAEEATGKKP-NILKSGRQSG 466 Query: 188 PIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 I S G +++ +G ++ + + + DI+ K Sbjct: 467 EFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNYVGMFTDISVAK 526 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 E++E+ A D +T L NRR F + +L+ +D D FK +ND G Sbjct: 527 AASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLG 586 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA------LSLAETIRV 357 H GD +L +A L +C R+GD V R GG+EFVLL+ + ++ + I + Sbjct: 587 HDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILM 646 Query: 358 SVAKVSISGLPRF--TVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 S+ + + T SIG++ G+ ES ++L K D A+Y+AK GRN Sbjct: 647 SLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRN 697 >UniRef50_C7RS23 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=2 Tax=Betaproteobacteria RepID=C7RS23_9PROT Length = 439 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 86/327 (26%), Positives = 134/327 (40%), Gaps = 9/327 (2%) Query: 89 RLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPS 148 +L L + +G LG + QR + NSA ++ Sbjct: 100 QLAEAALRAGAQDYLVKGQFEHDALGRAIRHALVRQRLESRLRLFEAALNSAANGIVITD 159 Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFV 206 + I AN A G + E+ GR+ + L G V Sbjct: 160 VNAAIEWANPAFTAMTGRTLAEAVGRTPGEVLKSGRQDAAFYQRMWATILAGQVWSGELV 219 Query: 207 HKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNR 264 ++ DGS P+ ++ + I DI+E+K EE+++H AHHD +T L NR Sbjct: 220 NRRKDGSVYDEALTISPVTDMNGRIQHFVAIKQDISERKVTEERVQHLAHHDQLTDLPNR 279 Query: 265 RQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA-R 323 Q +L+ +D D+FK +ND GH GD +L +A L+SC R Sbjct: 280 ALLSDRLAQAVAQARRDRGTLALMFLDLDQFKPVNDTLGHDVGDLLLKEVALRLQSCVPR 339 Query: 324 KGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE 380 + D V R GG+EFV+LL + A+ +A I ++ + + S+G+A + Sbjct: 340 ESDTVSRLGGDEFVILLAQMDKAADAVVVAGKILAALQRPFAIGPHEIGISASLGIAVYP 399 Query: 381 -GNESIDELFKRVDDALYRAKNDGRNR 406 E ++ L K D A+Y AK GRN Sbjct: 400 QHGEDVNRLLKNADTAMYHAKKAGRNC 426 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 151/405 (37%), Gaps = 25/405 (6%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDL-----TFSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 W + +LI+++ ++ D ++ + + Y+ + N Sbjct: 549 WALDLVTGKLIWSDEMFRIFETDEAAFGQSYEAFLDALHPEDREHVNKAYMHSVTNHTPY 608 Query: 72 IEI-LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 + + L R R + I G T + Q Sbjct: 609 DLVHRLLLPDGRVKWLHGRGETR-YGKNGDPIASCGTVQDIT-------ARKKQEDALRL 660 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM 190 YA F + ++ + I+ N A N GY + + + I G+ Sbjct: 661 YASIFE--HSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEP-TILAGGQASEESY 717 Query: 191 H--EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLE 246 S G+ + + DG+ + + DITE+K E Sbjct: 718 RSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKLAE 777 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 Q++H A+HD +TGL NR + + +++ +D DRFK IND GH+ Sbjct: 778 AQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHAL 837 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSIS 365 GD++L +AR L R D+V R GG+EFV++L A +A+ + ++ Sbjct: 838 GDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRI 897 Query: 366 GLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 G T SIG++ + + D L K D A+Y AK+ GR+ V Sbjct: 898 GGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNV 942 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 62/199 (31%), Gaps = 8/199 (4%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 ++ ++ + + + + L +L + + L + Sbjct: 336 RRFARPIRAMTRVADQIAAGDLRQRVPQDGGDELGRLAAAFNRMADTLAASYDNLEAEVE 395 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 + + R+ A L++ R+G+I N A Y+ + + W+ Sbjct: 396 KRSRELRELSALQGAILE--HAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWD 453 Query: 179 INMLGRRVMPIMHEISHL----PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--M 232 R + + L L DG R ++ + K+ + Sbjct: 454 FIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFV 513 Query: 233 LCIVHDITEQKRLEEQLEH 251 + + +D+T++ R E L+ Sbjct: 514 VAVGNDVTDKMRAEAALKE 532 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 65/247 (26%), Gaps = 21/247 (8%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKEL----PKYLSDLQNQHDIIE 73 +V E ++ N A + L Q + +E + + L N + Sbjct: 420 VVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPEERRIVQDEAFAVLFNDPEQSR 479 Query: 74 ILTVQ----RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 R + + V + T + R+ ++ + Sbjct: 480 STLTNHWVARDGGRRLIEWSNSVLH-DAQGKVEFVVAVGNDVTDKM---RAEAALKESES 535 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN--MLGRRVM 187 +D G+++ + + E + + Sbjct: 536 RLKEAQRIAQVGSWALDL-VTGKLI-WSDEMFRIFE-TDEAAFGQSYEAFLDALHPEDRE 592 Query: 188 PIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQK 243 + H H P + VH+ L DG + + + V DIT +K Sbjct: 593 HVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDITARK 652 Query: 244 RLEEQLE 250 + E+ L Sbjct: 653 KQEDALR 659 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 92/415 (22%), Positives = 157/415 (37%), Gaps = 22/415 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 T D + P++++ + + S+ L+ + V + LS Sbjct: 495 QLQATFDAIPDPLFVL-GLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLS 553 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L+ + E T K+ E L+ +L+ + L SR Sbjct: 554 ALR---EANEKGTSTGKQFELQLAHGRAWFELSVARKSVGQRQEPRFIVL----SRDITE 606 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 +++ + + + G ++ N A GY+ + + + + G Sbjct: 607 RKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPR-LLQSG 665 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDI 239 R + G ++ +G ++ G + DI Sbjct: 666 RHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDI 725 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 T +K E+++ + A D TGL NRR + + +LLLID D FK +N Sbjct: 726 TRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLN 785 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAE 353 D GH KGD +L +A+ L SC +G V R GG+EFV++L A +LA+ Sbjct: 786 DTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAK 845 Query: 354 TIRVSVAKVSISG--LPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 I S+ + + T SIG+ E E+ ++L KR D A+Y+AK GRN Sbjct: 846 RILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRN 900 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 82/413 (19%), Positives = 158/413 (38%), Gaps = 19/413 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQK---ELP 59 + L+ + +V F+ ++IYAN + + + + + + Sbjct: 1 MQYADLLENSNDLIQVV-GFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQ 59 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + L + + + + + E +G T + Sbjct: 60 DRIQRLMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDIT---ARKK 116 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + + + + ++ A + ++ P G + AN A NF GYN E + Q ++ Sbjct: 117 TEKALQTSEERFRTIYESSVAGIAMLAPD--GHFLQANSAFCNFLGYNEEELLQMKITDV 174 Query: 180 NMLGRRVMPIMHE--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 + + DGS Q + + + Sbjct: 175 THPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPV 234 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 + DIT +K EE++ A++D++TGL NR F + + ++L+ +D DRF Sbjct: 235 IQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRF 294 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL--SLAE 353 K +ND GH+ GD +L A L C R+ D V R GG+EFV++L + A +A+ Sbjct: 295 KGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSD-YKEDANLPRVAD 353 Query: 354 TIRVSVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDG 403 I +++ G+ + S+G+A + + +L + D A+Y AK G Sbjct: 354 KILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESG 406 >UniRef50_B9Z7T9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7T9_9NEIS Length = 770 Score = 353 bits (907), Expect = 7e-96, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 26/409 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQ------KELP 59 D + ++++ P + ++ +AN + L + ++ ++ Sbjct: 355 RAIYDSSSVALFLMKP-DGKIAHANQRMAAMFHTLLPELIGRDYDTLLPPAEQDGARDWQ 413 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 +S Q IE + E V+ G+ T Sbjct: 414 ARVSAQQGTPASIERCYRRFDGGEFWGVTTGCALH-DAGGRVLGIVGVIEDVT------- 465 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + F+ + +++ + +IV N A GY+ + + +I Sbjct: 466 ERHKNEAGMRLASTVFMASPTGIMV--TDAEERIVSVNPAFTLITGYSAAEIIGQTP-KI 522 Query: 180 NMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 G+ E+ G G +++ G + ++ + + Sbjct: 523 LASGQHDADFYQELWRSIGQDGFWEGELLNRHKQGHLYLEMISISRVVDGQGRVVNYVGM 582 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 D+TE+++ EE++ H AHHD +TGL NR + ++L +D DRF Sbjct: 583 FQDVTERRQAEERIRHLAHHDYLTGLPNRAHLLERASQALALARRYQRRLAILFLDLDRF 642 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K IND YGH GD VL +A L + R+ D V R GG+EFV+LL + LA T Sbjct: 643 KPINDRYGHDVGDVVLRTVADRLLALVRESDTVCRLGGDEFVILLAEYHDFASVEQLAHT 702 Query: 355 IRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAK 400 +R ++ + G R + SIG+A + +S+ L +R D A+YRAK Sbjct: 703 LRTAIEQPCEVGALRLAVSASIGIATYPEHGDSVGALIQRADAAMYRAK 751 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 62/177 (35%), Gaps = 7/177 (3%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 L+ +VL L ++ + A +AS + + ++Q + ++S + Sbjct: 306 RIVLASGIVLTLLLVAASQLLGRSHQRLAAALREASLANRHLAEQQSLLRAIYDSSSVAL 365 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV--MPIMHEISHLPGGH 200 L+ P G+I AN + + + + + +S G Sbjct: 366 FLMKPD--GKIAHANQRMAAMFHTLLPELIGRDYDTLLPPAEQDGARDWQARVSAQQGTP 423 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHH 255 + ++ DG T + G ++ ++ ++ D+TE+ + E + A Sbjct: 424 ASIERCYRRFDGGEFWGVTTGCALHDAGGRVLGIVGVIEDVTERHKNEAGM-RLAST 479 >UniRef50_C6WYT7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYT7_METML Length = 526 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 81/409 (19%), Positives = 156/409 (38%), Gaps = 18/409 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSA-AKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 +D L VW+ E + I N A +D + + S ++ Y + Sbjct: 104 RAFIDSLPFMVWL-KDEESRFISVNKVHANNYGEDSPEKMIGKTDFDYSPKELAEYYRQE 162 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 + + + V +ET + + + + T+G S + Sbjct: 163 DLSVLESRQPKLV----DETFIDPEGKTHWIETFKAPVTDNDGNLLGTVGFARDISEQKR 218 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 + + + + + +++ + +I+ N A G+ E + + G Sbjct: 219 IENELKVSAIAMESQEGIII--TDANSKILKINDAFTKITGFTSEEAVG-NRMTLLKSGV 275 Query: 185 RVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 E+ G +K G ++ + + + DIT Sbjct: 276 HDAAFYKEMWESISTQGSWQGEIWNKRKSGEIYPEWLTISAVKNAEGVVTNYVGTMIDIT 335 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 +K +EE++ H AH+D +T L NR Q +++ +D D+FK +ND Sbjct: 336 ARKSIEERVHHMAHYDPLTDLPNRSLLTDRLHQALAQARRENAMLAVMFLDLDKFKIVND 395 Query: 301 LYGHSKGDEVLCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVS 358 GH GD +L A+A L +C R+ D V R GG+EFV+LL + + +A+ + S Sbjct: 396 TLGHDIGDALLKAVAIRLTNCFKRQTDTVSRLGGDEFVVLLAKIETEQDVAMVAQEVIQS 455 Query: 359 VAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 + + + + SIG++ H + L + D+A+Y +K+ GR Sbjct: 456 LTETFYIEEHVINISCSIGISLHPKNGNDVASLLRSADNAMYESKHAGR 504 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 5/156 (3%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 I A + K + + + +K +Y R F +S P ++ + + + N Sbjct: 73 RILASKIAAMNIDFKTLKQSESRLQKIEYYQRAF-IDSLPFMVWLKDEESRFISVNKVHA 131 Query: 162 NFYGY-NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQT 219 N YG + E M K ++ + ++S L L + +G T ++T Sbjct: 132 NNYGEDSPEKMIGKTDFDYSPKELAEYYRQEDLSVLESRQPKLVDETFIDPEGKTHWIET 191 Query: 220 YAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAA 253 + P+ L+ + DI+EQKR+E +L+ +A Sbjct: 192 FKAPVTDNDGNLLGTVGFARDISEQKRIENELKVSA 227 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 352 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 158/412 (38%), Gaps = 19/412 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 LD + + V+I + +YAN + ++ S + L K S + Sbjct: 164 EALDHIPAFVYI-KDINGKYVYANRMTLDFFKCSVDDLVQIDEGKYFSARTLEKSRSVDK 222 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 + + E EE A+S R + + I + S + Sbjct: 223 SVIERGE----DACEEIEAVSDDDKKRTFLQIKTPIYENEADRKIWGLCGISTDITALKN 278 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + ++ I+ N A GY+ E + K+ I GR Sbjct: 279 AETSLRIAATAFESSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPR-ILSSGRHD 337 Query: 187 MPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + G ++ +G + ++ K+ + + DI+E Sbjct: 338 QLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFTDISES 397 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K EQ+EH A +D +T L NR + +LL +D D FK +ND Sbjct: 398 KASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKVLNDTL 457 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD--TALSLAE----TIR 356 GHS GD +L A L C R GD V R+GG+EFV++L + A ++AE I Sbjct: 458 GHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQIGNKIL 517 Query: 357 VSVAKV--SISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 ++ + + + T SIG+ G+E I++L K+ D ++Y+AK GRN Sbjct: 518 STLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRN 569 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 6/165 (3%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT-NSAPMLLIDPSRDGQIV 154 ++ V+ + A L + + R + P + +G+ V Sbjct: 124 AQSLQVLNQALARSHAELETRVQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYV 183 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGS 213 AN L+F+ + + + Q + + S + G D Sbjct: 184 YANRMTLDFFKCSVDDLVQIDEGKYFSARTLEKSRSVDKSVIERGEDACEEIEAVSDDDK 243 Query: 214 TRHVQTYAGPIE----IYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 R PI + I DIT K E L AA Sbjct: 244 KRTFLQIKTPIYENEADRKIWGLCGISTDITALKNAETSLRIAAT 288 >UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=Chroococcales RepID=B7K4E5_CYAP8 Length = 840 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 106/403 (26%), Positives = 179/403 (44%), Gaps = 36/403 (8%) Query: 13 TSPVWIVSPFEEQLIYANSAAKL----LMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 +P+ ++ FE ++ Y N +A++ L QDL+ + G SS ++ ++ ++Q + Sbjct: 190 PNPIIEIN-FEGEITYLNISARVKFPTLQQDLSKHPILEGLIVGSSTQKGTSFVREIQIE 248 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 H E + E++ A+ RL L +T+ ++ EA T G R Sbjct: 249 HAFFE-QHIHYLEDKKAI--RLYLFDITK------YKTREAKLTTGKDRYR--------- 290 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 F+ + +L+ I++AN A + GY + ++ + + + Sbjct: 291 -----LFVEQATEGILLVNCETQYIIEANQAYCHLLGYTTAEIIGLSLHQLIAIDKAI-- 343 Query: 189 IMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 I E+S + +H+ DGS V G ++ ++ DI ++K+ E Sbjct: 344 IDQELSCVTSETPYFIKESIHRHKDGSLISVSGKINRTTYQGQEIFCLVIRDIRDRKQAE 403 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 EQL++ A HD +T L NR F +++ +D D F +IN+ G S Sbjct: 404 EQLQYQALHDPLTNLPNRESFNQKLVLALDHAQRYQHLMAVMFVDIDSFTNINNTLGPSI 463 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSIS 365 GD +L + + L SC R GD V RWG +EFVLLLP+ + + LA+ I ++ I Sbjct: 464 GDRLLDSFGKRLSSCVRTGDTVARWGSDEFVLLLPQIKNTEDTVKLAQRIFDNLQVPFIL 523 Query: 366 GLPRFTV--SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 R V SIG+A + E+ + L K AL R K GRN Sbjct: 524 DDHRLPVKCSIGIAVYPQDGEAGETLLKNAGTALGRTKEQGRN 566 >UniRef50_Q47J00 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47J00_DECAR Length = 715 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 85/416 (20%), Positives = 153/416 (36%), Gaps = 24/416 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + ++ + + I+ +++AN L+ + Q++ Sbjct: 300 RYRSVIETSQNAILIMQAPNFVIVFANEQGAALVGLAPSQMIDRPILDFVCQQDRSMVAE 359 Query: 64 DLQNQHDIIEIL-----TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 L + + R + + + ++ + T L Sbjct: 360 RLARRARGEPVSPTVRAHFCRLDGSQVRVGDVHVARIESASEYPQWVLSVHDVTNRLANE 419 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R+ + +A ++ +I+ N A GY + + K Sbjct: 420 RALQI---------SAAVMENAAEGIVVTDAQNRIIQVNPAFSAITGYRPQEVLGKDPSL 470 Query: 179 INMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG---DKLML 233 + GR E+ GH ++ DG+ V I G + Sbjct: 471 LGS-GRHESGFFREMWETLEKEGHWAGEIWNRRPDGTVYVVWLAISAIRGEGVESGGRHV 529 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 DIT++K +EE L H A D +T L NR FY + +++++LL ID D Sbjct: 530 ATFIDITQRKEVEELLRHRAQSDPLTDLPNRTLFYDRLQVALTHARRYSEEFALLYIDLD 589 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 FK +ND GH+ GDE+L + L R+ D V R GG+EF ++LP+T +A Sbjct: 590 HFKIVNDTLGHAAGDELLIEASHRLTQAVRQSDTVARLGGDEFAVILPKTGSQSEIEEVA 649 Query: 353 ETIRVSVAKVSIS--GLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + ++ + + G + S+GVA + E ++ + D ALY K GRN Sbjct: 650 QRVVETMVRPFLLSAGTINISTSVGVAIYPRHGEDLEAIRASADAALYSVKQSGRN 705 Score = 60.9 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 44/160 (27%), Gaps = 5/160 (3%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 L + E + R + + Y T+ +L++ + IV Sbjct: 265 LIAERTQALSSANEQLIGEVAERKRKEIQISESEARYRSVIETSQNAILIMQA-PNFVIV 323 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFV--HKLADG 212 AN G M + + R M G DG Sbjct: 324 FANEQGAALVGLAPSQMIDRPILDFVCQQDRSMVAERLARRARGEPVSPTVRAHFCRLDG 383 Query: 213 STRHV-QTYAGPIEIYGD-KLMLCIVHDITEQKRLEEQLE 250 S V + IE + + VHD+T + E L+ Sbjct: 384 SQVRVGDVHVARIESASEYPQWVLSVHDVTNRLANERALQ 423 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 87/398 (21%), Positives = 142/398 (35%), Gaps = 20/398 (5%) Query: 27 IYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDI----IEILTVQRKEE 82 + N L + T +S S+ L + + I I + Sbjct: 172 VIMNIGGGLFLLLAAVKLFLTYRHSAKSEDLLFFFQCLILASAAITFMQSSIWDMPWWGW 231 Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 L + EG + + +++ + Sbjct: 232 HMQRLAGYTLTLWLVVKTAKTIEGKTLLS--NRLLKQQIEDRKQAENQLRIAATAFETHE 289 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGH 200 ++ I+ N A N GY+ E + K+ + GR+ + L G Sbjct: 290 AIMITDAHANIIRVNQAFQNITGYSPEDVIGKNPRVL-SSGRQGSEFYAAMWKRLLGSGS 348 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAM 258 K +G ++ + I DIT +K EE++ A +D++ Sbjct: 349 WTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSL 408 Query: 259 TGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTL 318 T L NRR + +LL +D DRFK +ND GH GD L ++R + Sbjct: 409 TKLPNRRHLLDRINQARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRM 468 Query: 319 ESCARKGDLVFRWGGEEFVLLLPRTPLDT------ALSLAETIRVSVAKVSI--SGLPRF 370 +C R D V R GG+EFV+L+ D +AE IR ++ + + Sbjct: 469 RNCVRDMDTVARIGGDEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHS 528 Query: 371 TVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRV 407 + SIGV + ES+D L + D A+Y+AK GRN V Sbjct: 529 SPSIGVCLYLGNEESVDTLLRHADLAMYQAKESGRNGV 566 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 94/416 (22%), Positives = 156/416 (37%), Gaps = 20/416 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLT---FSQLRTGPYSVSSQKELPK 60 + + P+ + Q I N A + + + E K Sbjct: 451 KFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAK 510 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + + + + + V L+C + R +T + + R+ Sbjct: 511 RIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVTT----LRDITQQQRA 566 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRD-GQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + +A+ F +S+P + R G+ ++ N GY+ + + +EI Sbjct: 567 EAALKSSEEKFAKAF--HSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEI 624 Query: 180 NML-GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + + + G + + G V+ PI + +L D Sbjct: 625 GIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARD 684 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +++ K + Q+ H A+HD +T L NR +LL +D D FKHI Sbjct: 685 VSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHI 744 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLA 352 ND GH GD VL + LE+ R D V R GG+EFV+LL + LA Sbjct: 745 NDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELA 804 Query: 353 ETIRVSVAKVSISGL--PRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 +T+R +A+ + T SIGVA + +L KR D ALYRAK+ GRN Sbjct: 805 DTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRN 860 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 72/281 (25%), Gaps = 23/281 (8%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 L+ W+ ++ ++ + L L Sbjct: 69 QLLAALNGAHLGAWLWDIESGRVSWS-RGTQALFGFDPQRPL-PADIDYLDLLPEEDRAR 126 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETE----PVIIFEGIEAPATLGLKASR 119 Q ++ V++ L L + + Sbjct: 127 TRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQMIGVIREITRQRE 186 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + +A F + +LL RDG I + N + +G+ + K + E+ Sbjct: 187 RETALINSEKRFATLFHLSPNAILLTR-RRDGMIFEVNQHFEDMFGWPGSQVIGKTSLEL 245 Query: 180 NML-GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 + + E + GG + + G IE+ G ++ D Sbjct: 246 GLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELEGVTFLISTFVD 305 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHL 279 TE+KR E+ L+ D+ + Sbjct: 306 TTERKRAEQALK-----DS----------QERLDLALDSAQ 331 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 13/251 (5%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ------DLTFSQLRTGPYSVSSQKELPKY 61 LD W ++Y ++ A L +F G Y Sbjct: 326 ALDSAQLGTWDWHIPSG-MLYGSARAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQAY 384 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRS 120 S + +I + E T+ R + + G T ++ + Sbjct: 385 RSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQR 444 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + +A F + P+ + GQ ++ N A +G++ + + EI Sbjct: 445 LSA---SEEKFASLFQVSPDPICVTRQD-TGQFIEINPAFTQTFGWSSAQVLGRTAEEIG 500 Query: 181 MLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 + V E + V +G + I + + + DI Sbjct: 501 LWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVTTLRDI 560 Query: 240 TEQKRLEEQLE 250 T+Q+R E L+ Sbjct: 561 TQQQRAEAALK 571 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 84/421 (19%), Positives = 154/421 (36%), Gaps = 27/421 (6%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLI--YANSAAKLLMQDLTFSQLRTGPYSVSSQ--- 55 M LD S + ++ EE + + + + L G ++ + Sbjct: 273 MTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSHNLTRMTGFSVAEALAQGWWARTVHPDD 332 Query: 56 -KELPKYLSDLQNQ-HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATL 113 + + + ++ H + E + L + E V+ G+ T Sbjct: 333 LERASRAVRAVEEDGHYVHEYRIRCADGGVRWIRDELRAVR-DEGGRVVRVAGVWIDIT- 390 Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 ++ + + S ++ DG IV N A GY+ + + Sbjct: 391 --------EQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVG 442 Query: 174 KHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--GD 229 ++ + GR + GH ++ +G + Sbjct: 443 QNPRFLQS-GRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHV 501 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 + + DI++ K+ E++L++ AHHD +T L NR E +++ Sbjct: 502 THYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMF 561 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL-DTA 348 +D DRFK +ND GH+ GDE+L A+A L R+ D + R GG+EF++LL A Sbjct: 562 LDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADA 621 Query: 349 LSLAETIRVSVAKVSISGLPR---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 +A+ + +A SIG++ + + L + D A+YRAK GR Sbjct: 622 AVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGR 681 Query: 405 N 405 N Sbjct: 682 N 682 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 142/375 (37%), Gaps = 17/375 (4%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTET 98 D +L + P + + L + I I + + E L ++ Sbjct: 220 DRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIGVLDGEGELVDL--------VSFK 271 Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 + + E +R ++ Y + S+ ++ +I+ N Sbjct: 272 DILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNP 331 Query: 159 AALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRH 216 A GY E + + +N GR+ + L G ++ G Sbjct: 332 AFTRMTGYAPEEVVGLNPSVLNS-GRQSPAFYARMWDGLLGDGQWQGEVWNRRKTGEVYP 390 Query: 217 VQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPG 274 + I + DI+ K E ++ A++D +TGL NRR + Sbjct: 391 QLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVE 450 Query: 275 QMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE 334 + +++ +D DRFK IND GH+ GD++L +A L + R D V R GG+ Sbjct: 451 LAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGD 510 Query: 335 EFVLLLPRTP-LDTALSLAETIRVSVAKVSISG--LPRFTVSIGVAHHEGN-ESIDELFK 390 EF+++L D A ++A + + + T S+GVA + + D L K Sbjct: 511 EFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVK 570 Query: 391 RVDDALYRAKNDGRN 405 D A+YRAK++GRN Sbjct: 571 HADVAMYRAKDEGRN 585 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 85/416 (20%), Positives = 155/416 (37%), Gaps = 18/416 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 + +D V+++ +++ N A + + L G + S + L Sbjct: 341 DIIDFFPDAVFVID-RNKRVTIWNRAIEKMSGVPKEEMLGKGDHEYSIPFYGQRRTQLLD 399 Query: 67 NQHDIIEILTVQRKEEETA---LSCRLVLRKLTETEPVIIFE------GIEAPATLGLKA 117 L + L L + + ++ ++A Sbjct: 400 LLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGAYVWATGVPLYNAAGERIGAIEA 459 Query: 118 SRSANYQRKKQGFYARFFL-TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 R + +++ + F + ++ ++ G I N + G++ E K+ Sbjct: 460 IRDISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVNKKFIQLTGFSLEEAVGKNP 519 Query: 177 WEINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--ML 233 + + + L G +++ +G T P+ ++ + Sbjct: 520 RILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFI 579 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 V DI E+K E +EH A+ D +T L NRR E + + +L+ +D D Sbjct: 580 ANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLD 639 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLA 352 FKH+ND GH GD +L +A R D+V R GG+EF L+L D + +A Sbjct: 640 SFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIA 699 Query: 353 ETIRVSVAKV-SISG-LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + +VA+ + G T SIG+A + L K D ALY AK +G+N Sbjct: 700 QKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKN 755 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 94/414 (22%), Positives = 174/414 (42%), Gaps = 28/414 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ------DLTFSQLRTGPYSVSSQKELPKY 61 L+ +W + ++ ++ K ++ D + + ++ Sbjct: 198 ALEGAGDGLWDWNLKTNEIFFS-KRWKEMLGFKEDELDSNLDEWNKIVHPEDLEQVNADI 256 Query: 62 LSDLQNQHDIIEILTVQRKEE--ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + ++ + D+ + + ++ + R ++ I G + + Sbjct: 257 AAHIEGKSDVYKNEHRVKCKDNSYKWILDRGLIVSRDIDGSPIRMVGSHSDIS------- 309 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +++ Q + ++ G+I A+ A + GY + K+ I Sbjct: 310 ---ERKQSQLKIEEYMRIIDKNVISSTTDLHGKITKASTAFCDISGYRKNELLGKN-HNI 365 Query: 180 NMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 + E+ G ++ +GS+ V P++ D++ I Sbjct: 366 VRHKEIPQTLYKELWETIKAGNVWQGEIKNRHKNGSSYWVDVSISPVKNEKDEIISYTAI 425 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 HDIT++KR+EE + D +T L NR + I ++S+++ID D F Sbjct: 426 RHDITDKKRIEE----LSITDRLTQLYNRLKLDEIFAMKLATAGRYNTNFSVIIIDIDYF 481 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K +ND +GH GD+VL A +++ AR+ D+V RWGGEEF++L T LD A+ L+E + Sbjct: 482 KLVNDTWGHQAGDDVLREFAEIIKNNARETDIVGRWGGEEFLILSSDTDLDGAIKLSEKL 541 Query: 356 RVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 R V+ + S T S GV+ + + + KR D+ALYRAK +GRNRV A Sbjct: 542 REMVSLFNFSFAGYKTASFGVSSYHPGDDEKTMVKRADEALYRAKENGRNRVEA 595 Score = 63.2 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 40/143 (27%), Gaps = 11/143 (7%) Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 AS++ + F A L D + + + G+ + + Sbjct: 181 ASKATKKLHTSEERLR--FALEGAGDGLWDWNLKTNEIFFSKRWKEMLGFKEDE-LDSNL 237 Query: 177 WE---INMLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQ---TYAGPIEIYG 228 E I +H+ G K D S + + Sbjct: 238 DEWNKIVHPEDLEQVNADIAAHIEGKSDVYKNEHRVKCKDNSYKWILDRGLIVSRDIDGS 297 Query: 229 DKLMLCIVHDITEQKRLEEQLEH 251 M+ DI+E+K+ + ++E Sbjct: 298 PIRMVGSHSDISERKQSQLKIEE 320 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 144/414 (34%), Gaps = 20/414 (4%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 LD L +W + + ++ + N + G YS + + Sbjct: 339 FQTILDNLPLGMW-MLGVDGKIKFVNETFCNALGIAAHDFFDAGHYSDLLPLSIADKCKE 397 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 + E + R + T + + + Sbjct: 398 --SDRACFMQGEPHYSTEWLPFTDG---RAHLLEMTRVRLHDSANNVTGLIGLAADITER 452 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 +K + A ++ R I+ N A + GY E + K+ + GR Sbjct: 453 QKVESELRIAAAAFEAQEGMLITDRHNVIMRVNQAFTSITGYLAEEVLGKNPCFL-ASGR 511 Query: 185 RVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 + G ++ DG ++ +++ + DIT Sbjct: 512 HDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISAVKDIKNEVANYVATFRDIT 571 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 K E +++ A +D +T L NRR +LL ID D FK +ND Sbjct: 572 ANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLND 631 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLAET 354 GH GD +L +A L+SC R+ D + R GG+EFV++L A + E Sbjct: 632 TLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELIGEK 691 Query: 355 IRVSVAK--VSISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 I ++ + S SIGV G+ SIDEL K+ D A+Y++K GRN Sbjct: 692 ILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRN 745 Score = 74.0 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 75/248 (30%), Gaps = 11/248 (4%) Query: 14 SPVWIVS-PFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 SPV I + Y N+ L+ Y++S LP + L Sbjct: 219 SPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLSDNAVLPALTAALAGDRGYF 278 Query: 73 EILTVQ-RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 E + A++C VI I A + +K Sbjct: 279 EGQYQAVFNDGWIAMTCAASC---DARGNVIGGIAIVESIHERKMAEMALALSNQKHDEE 335 Query: 132 ARFFLT--NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC--QKHTWEINMLGRRVM 187 + F T ++ P+ + DG+I N N G ++ + + Sbjct: 336 RKLFQTILDNLPLGMWMLGVDGKIKFVNETFCNALGIAAHDFFDAGHYSDLLPLSIADKC 395 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL 245 + G DG ++ + + + ++ + DITE++++ Sbjct: 396 KESDRACFMQGEPHYSTEWLPFTDGRAHLLEMTRVRLHDSANNVTGLIGLAADITERQKV 455 Query: 246 EEQLEHAA 253 E +L AA Sbjct: 456 ESELRIAA 463 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 150/411 (36%), Gaps = 15/411 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + + + S +I+ N A++ L L + P Sbjct: 457 KFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQALGKKLEDLIIPP--PYREH 514 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + N + I EE + + +I + Sbjct: 515 VINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLI---NNTDNEAEMYCIDIDLSA 571 Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 Q+K + +P+ +I + D +I N A GY + + + Sbjct: 572 QKKAEEQALTLSQAIEQSPISMILTNIDSKIEYVNSAFEKISGYAASEVIGQSASMLKS- 630 Query: 183 GRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHD 238 G + ++ G ++ +G + PI K L + D Sbjct: 631 GLTPKSLYKQLWDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDNAGVTKHYLALKQD 690 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 +T+ K+ EE++ H AH+D++TGL NR + ++L +D D FK + Sbjct: 691 VTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNVAVLFLDLDDFKKV 750 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRV 357 ND GHS GDE+L A L++ R+ D+V R GG+EF+++L +A + Sbjct: 751 NDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINEPIEVEIIASKLLE 810 Query: 358 SVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + T+SIG+A + +E EL ++ D A+Y +K+ GRN Sbjct: 811 QFYQPFRLENRELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKDRGRN 861 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 74/249 (29%), Gaps = 13/249 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD- 64 + +D + ++ + + N A ++ Y + +++ ++ Sbjct: 211 QSIIDGIPDIIF-YKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLFDRQQADSFIKAD 269 Query: 65 ---LQNQHDII-EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 LQ + E + + + G+ Sbjct: 270 RFVLQENQPWMDEEWITTPDGIAHIFKTHKTPF-VDSSGDIQGIVGVSRDMADRKLI--- 325 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R+ + Y T +++ G+I+++N + + GY + + K +I Sbjct: 326 EEQLRRSESTYRNIISTAQDGFVIVSVD--GKIIESNQSFADMTGYTLDELFNKPIGDIE 383 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + I+ HK G HV+ + + C + DI+ Sbjct: 384 TSENHQFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDG-MFFCFIKDIS 442 Query: 241 EQKRLEEQL 249 ++ E++L Sbjct: 443 QRINAEQKL 451 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 87/297 (29%), Gaps = 41/297 (13%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 N + +++ + ++I +N + + + + + + Sbjct: 336 YRNIISTAQDG-FVIVSVDGKIIESNQSFADMTGYTLDELFNKPIGDIETSENHQFSTQN 394 Query: 65 LQNQHDIIEI----LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + + I + + + + + I + Sbjct: 395 IITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFCFIKDISQRIN-------A 447 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + F + + + ++ ++ N A+ YGY E K ++ Sbjct: 448 EQKLLLSESKFRHIFENIPS-ISVQGYDKNRSVIFWNQASEKLYGYTKEQALGKKLEDLI 506 Query: 181 MLGRRVMPIMHEISHLPGGHKPL---NFVHKLADGSTRHVQTYAGPIEI-YGDKLMLCIV 236 + +++ ++ P+ + + ADGS V + I + M CI Sbjct: 507 IPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNTDNEAEMYCID 566 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 D++ QK+ EEQ A+T Q S++L + D Sbjct: 567 IDLSAQKKAEEQ--------ALT-----------LSQAIEQS-----PISMILTNID 599 Score = 67.9 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 5/153 (3%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 ++ + + + + N ++ + P ++ S DG + N A Sbjct: 181 LLLKQHQQRQQISQELHHHKNLLETEKNLLQSII--DGIPDIIFYKSADGVYLGCNKAFS 238 Query: 162 NFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH-KPLNFVHKLADGSTRHVQTY 220 N E + K +++ + I + L DG +T+ Sbjct: 239 EALKLNPEDIKHKTDYDLFDRQQADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTH 298 Query: 221 AGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH 251 P + ++ + D+ ++K +EEQL Sbjct: 299 KTPFVDSSGDIQGIVGVSRDMADRKLIEEQLRR 331 >UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZG2_SULD5 Length = 768 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 96/408 (23%), Positives = 164/408 (40%), Gaps = 14/408 (3%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLM---QDLTFSQLRTGPYSVSSQKELPKYLSDL 65 + V +++ E + N AK ++ L + + ++ +L + Sbjct: 359 FKTMQEGVMVIN-REGVITECNDTAKKILPSFNKTLIGTLNSELPWKALHEDGSSFLPEE 417 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 ++ Q + + ++ + + R Sbjct: 418 LPFMKVLRSGESQ-NGIIMGIQREGYPLVWMQMNAAPLYLHDNDNVSAVVLTLSDITNYR 476 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + ++ +++ G I + + A GY+ E + + I Sbjct: 477 RSKYKLEKYLSMIDKHVIISTTDLKGVITEVSEAFCKISGYSKEELIGAN-HSIVRHADV 535 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 + E+ G ++ DGS V+T P L I DIT+ Sbjct: 536 PSSVYEEMWKAIKSGLIWRGELKNRHKDGSAYWVETIIAPRYDEDYSLIGYTAIRTDITD 595 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +KR+EE + D +TGL NR + + +S++L+D D+FK +ND Sbjct: 596 KKRVEE----LSITDRLTGLYNRLKLDELFAHHLSIARRHHTPFSIILLDIDKFKSVNDT 651 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAK 361 YGH GD +L A +++ R D+ RWGGEEF+LLLP +PL+ A LAE +R+ VA Sbjct: 652 YGHQVGDTILQEFALCVKAQIRSEDIFGRWGGEEFLLLLPNSPLENASLLAEKLRLCVAS 711 Query: 362 VSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 S S + T S GVA + + RVD+ALYRAK +GRN+V+ Sbjct: 712 FSFSQVGMKTASFGVATFHEGDDEKSMMVRVDEALYRAKENGRNQVVL 759 Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 62/179 (34%), Gaps = 16/179 (8%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 +L + + V + + A A + + + F T +++I +R Sbjct: 316 GILFSILLSGWVYALQRTRSRAY--EIAEEKTKQLSESEAWVRLLFKTMQEGVMVI--NR 371 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEI---NMLGRRVMPIMHEI----SHLPGGHKP 202 +G I + N A ++T+ E+ + + E+ G + Sbjct: 372 EGVITECNDTAKKILPSFNKTLIGTLNSELPWKALHEDGSSFLPEELPFMKVLRSGESQN 431 Query: 203 LNFVHKLADGS-TRHVQTYAGPI---EIYGDKLMLCIVHDITEQKRLEEQLE-HAAHHD 256 + +G +Q A P+ + ++ + DIT +R + +LE + + D Sbjct: 432 GIIMGIQREGYPLVWMQMNAAPLYLHDNDNVSAVVLTLSDITNYRRSKYKLEKYLSMID 490 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 14/411 (3%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT-----GPYSVSSQKELP 59 ++ + + +W+V E ++ N AA L+Q+ S P Sbjct: 84 FRKVVETIPTGIWVVD-REGNVVDCNFAAHGLLQEFGIQAYNDIQGYAEIQGWWSDNGQP 142 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + + + T R++ + A + + L + P+ G T + + Sbjct: 143 VHPDEWGISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLKSENG---AITGAMALVQ 199 Query: 120 SANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 +RK RF F A + + +G+ + N A + GY+ + H W+ Sbjct: 200 DITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELESLHLWD 259 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 I+ + H+ DG V+ A ++ + V D Sbjct: 260 IDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRD 319 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT +K+ E++LEH ++HDA+TGL NR + + ++ ++ L+D DRFK I Sbjct: 320 ITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVI 379 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRV 357 ND GHS+GD VL A+A L +C GD + R GG+EF +++ A +A+ I Sbjct: 380 NDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILN 439 Query: 358 SVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + G R T SIG + + E ++L + D A+Y+AK G N Sbjct: 440 AFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGN 490 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 31/162 (19%) Query: 110 PATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN------------ 157 L + + + + T + ++ R+G +VD N Sbjct: 63 AMVLFFLLRNAIKRALYGEALFRKVVETIPTGIWVV--DREGNVVDCNFAAHGLLQEFGI 120 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA------D 211 A + GY + P+ + + + D Sbjct: 121 QAYNDIQGY--AEIQG-------WWSDNGQPVHPDEWGISRSLSRGETCLREKIDIACTD 171 Query: 212 GSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEH 251 G R V + P++ + + +V DITE+++ +E L Sbjct: 172 GVRRTVLYTSLPLKSENGAITGAMALVQDITEKRKTDEVLRR 213 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 89/410 (21%), Positives = 159/410 (38%), Gaps = 25/410 (6%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV----SSQKELPKYLSD 64 +D L ++I E + + N A + + + + L Sbjct: 216 IDALPDHIFI-KDKEGKYLGCNKAFQSFTGHQEADLIGKTDQDFSESNHAITDKSDTLQV 274 Query: 65 LQNQHDI-IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + N I E T ++ L +L L GI T Sbjct: 275 INNLLPINREAWTHEQDGSPILLESQLAPF-LDMDGEPQGIVGISRDIT---------EK 324 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 ++ ++ +P+ ++ + G++ N + GY+ + K I G Sbjct: 325 RKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKD-SSILKSG 383 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDI 239 + ++ + G F +K +G Q + P+ + L + D+ Sbjct: 384 KTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDV 443 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 T+QK EE++ H AH D +T L NR H E + ++L +D D FK +N Sbjct: 444 TKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRNQHQIAVLFLDMDDFKKVN 503 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVS 358 D GH GD++L A+ L+ R D + R GG+EF++L+ + AL +A+ + Sbjct: 504 DTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLINHLERPEQALPIAQNLLQQ 563 Query: 359 V-AKVSISG-LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + ++I G T+SIG+A + + EL + D A+Y +K GRN Sbjct: 564 FRSSLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADSAMYHSKAAGRN 613 Score = 83.6 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 80/260 (30%), Gaps = 16/260 (6%) Query: 9 LDLLTSPVWIVSPFEEQL------IYANSA-----AKLLMQDLTFSQLRTGPYSVSSQKE 57 ++ + + +V +L IY SA A + + + + + Sbjct: 79 FGVIPTLIAVVMTVTLRLYQGGAGIYVGSAVIICSALIGLGWRAYIEKHNKALTWWRLYF 138 Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + ++ K L+ + +I E + Sbjct: 139 LGLSVQITVLCLMFFMPEHLRYKIIAAIAPTILIFYPIGTMLLGMILSRQEERRLAEREL 198 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 S +++G ++ P + ++G+ + N A +F G+ + K Sbjct: 199 HISRQILNRERGLLRGLI--DALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQ 256 Query: 178 EINMLGRRVMPIMHEISHLPG-GHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLC 234 + + + + + DGS +++ P + ++ Sbjct: 257 DFSESNHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVG 316 Query: 235 IVHDITEQKRLEEQLEHAAH 254 I DITE+++ EE++ + Sbjct: 317 ISRDITEKRKAEERILTLSQ 336 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 26/373 (6%) Query: 49 PYSVSSQKELPKYLSDLQNQHDIIEILTVQRK---EEETALSCRLVLRKLTETEPVIIFE 105 +++ + + +Q + + + + T + +++ Sbjct: 403 LFALMHPDDAAGVAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQKLDDGSVLWH 462 Query: 106 GIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG 165 G + T +++ ++ +P+ ++ G I N G Sbjct: 463 GFVSDVT---------AHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSG 513 Query: 166 YNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGP 223 Y + ++ ++ + E+ L G F + DGS Q P Sbjct: 514 YRRAEVMGQNPRILSSH-EKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAP 572 Query: 224 IEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 I + L I DIT++K E ++EH A +D +TGL NRR + Sbjct: 573 IFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRS 632 Query: 282 AQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP 341 + +LL ID D FK++ND GH +GD +L +A+ L C R+ D V R GG++FV++L Sbjct: 633 RRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQ 692 Query: 342 RTPLD------TALSLAETIRVSVAKV-SISG-LPRFTVSIGVAHHEGN-ESIDELFKRV 392 A + + I ++ + + S+GVA + ++++EL KR Sbjct: 693 DLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRA 752 Query: 393 DDALYRAKNDGRN 405 D ALY+AK+ GRN Sbjct: 753 DLALYQAKDAGRN 765 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 16/325 (4%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQR---KKQGFYARFFLTNSAPMLLIDPSRDG 151 L + + + + + L Q K+ A F + ++ ++ Sbjct: 696 LEQDDEQQLLDELVQDVAFALDVHEHEQQQAFSMKQLQLAATVFDNSREG--IVLTDKNE 753 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH--KPLNFVHKL 209 +IV N A + GY + + + + R + H H ++ Sbjct: 754 KIVSVNRAFSDITGYRDDEVLGQTPRILKSN-RHGRDFYQNMWHCLAEHGCWQGEIWNRR 812 Query: 210 ADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 DG + + + + DI++ K +E+L++ + HD +T L NR F Sbjct: 813 KDGQVYPELMSMSAVCDDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLF 872 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 + +++L D D FK +ND +GH GD +L +A L SC R+ D+ Sbjct: 873 CTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDM 932 Query: 328 VFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV----SISGLPRFTVSIGVAHHE-G 381 + R GG+EFVLLL +AE I + + + +VS+G+A + Sbjct: 933 LARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEH 992 Query: 382 NESIDELFKRVDDALYRAKNDGRNR 406 EL +R D ALYRAK GR R Sbjct: 993 GRDALELLQRADSALYRAKQHGRAR 1017 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 21/205 (10%), Positives = 54/205 (26%), Gaps = 20/205 (9%) Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 H EI ++ L K+ E + + + + + + Sbjct: 359 HLSSEIKQLEEGFNHMLQVVDLQRDKIAEKVETLRLQTQRLESEVQTRQQAQQQLHIASE 418 Query: 129 GFYARFFLT----NSAPMLLIDPSRDGQIVDANLAALN-FYGYNHETM-CQKHTWEIN-- 180 L ++ P L+ + + N + + + K+ + Sbjct: 419 RHQETARLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDIAIGKNHEFFSDK 478 Query: 181 ----MLGRRVMPIMHEISHLPGGHK---PLNFVHK---LADGSTRHVQTYAGPIEIYGDK 230 + E+ + + G+ + Y P + Sbjct: 479 ILKEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVGHVKGTLICLDVYKAPFYGADGE 538 Query: 231 LM--LCIVHDITEQKRLEEQLEHAA 253 L+ + IT +K+LE++ + Sbjct: 539 LIGTVGSARIITREKQLEQETMRLS 563 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 86/309 (27%), Positives = 133/309 (43%), Gaps = 15/309 (4%) Query: 113 LGLKASRSANYQRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 LGL ++ + + + S ++ + IVD N A GY + + Sbjct: 232 LGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVNPAFTRITGYTLDEV 291 Query: 172 CQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 K+ I G+ + L GH K G + + Sbjct: 292 RGKNPR-IMQSGKHDNEFYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRSDG 350 Query: 230 KLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 + + DITE+K+ +E + A++DA+T L NRR + +L Sbjct: 351 GVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGAL 410 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD- 346 + +D D+FK +ND GH+ GD +L +AR ++SC R+ D V R GG+EFV+LL D Sbjct: 411 MFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADI 470 Query: 347 -----TALSLAETIRVSVAKVSISGL--PRFTVSIGVAH-HEGNESIDELFKRVDDALYR 398 A +AE IR S++ + SIGV+ H ES +EL K+ D A+Y+ Sbjct: 471 KDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQ 530 Query: 399 AKNDGRNRV 407 AK GRN V Sbjct: 531 AKEAGRNAV 539 >UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K923_AZOSB Length = 1255 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 157/407 (38%), Gaps = 15/407 (3%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 +D V + +P + +++ N+A L++ + L + + L Sbjct: 827 IIDTEPECVSLRTP-DGRVLEMNAAGLALVEADSVEALNAVGLPQLVAPAYREAFAALGR 885 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 + E T+ E + R R + + T L +R +R Sbjct: 886 RVSAGESATL----EFEIVGLRGSRRWIDAHATALRDAS--GEVTAILSVARDVTQRRDS 939 Query: 128 QGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM-LGRR 185 + + A + + +IVD N GY+ + +N R+ Sbjct: 940 EAQLRLAATVFTHAHEGIAICDAERRIVDVNPTFCEITGYSRQEAIGASLALLNSGEDRQ 999 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQK 243 + + GH + DG+ + + G + DIT K Sbjct: 1000 ALSPDMWQTVARRGHWEGELWNLRKDGTEYAQRLTISAVYDAGGTPTHYIGTFSDITFVK 1059 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 R +EQLEH AH+D +TGL NR + Q ++ +D D FK +ND G Sbjct: 1060 RQQEQLEHLAHYDPLTGLPNRSLLADRLQLALAQARREESAVAVCYLDLDGFKAVNDELG 1119 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV 362 H GD +L + R L+ C R GD V R GG+EFVLLL + + + ++A+ Sbjct: 1120 HQAGDLLLVEIGRRLKDCVRAGDTVARLGGDEFVLLLLDVAGQEECIQAVSRVLAAIARP 1179 Query: 363 -SISGLPR-FTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNR 406 +I+G R + SIG+A ++ + L + D A+Y AK G+N Sbjct: 1180 VTIAGEYRSVSASIGIALFPDDDDEPEVLLRHADQAMYLAKQRGKNC 1226 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 30/286 (10%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELP--- 59 F + S +I+ + ++ Y N A L+ L+ + ++ Sbjct: 415 LRKFKFFNDNASDAYILIDEDARIHYVNRATCDLLGYTEAELLQLTIPDIDPHYDVARVR 474 Query: 60 -KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 + S Q + E +R + ++ + A+ Sbjct: 475 AHFNSAKQGRVPPFESEHQRRDGSRFPVEVTSTALQVDGRW-------------MAFTAA 521 Query: 119 RSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R +++ + +F F++++A + DG+ + N A GY+ + Q Sbjct: 522 RDITLRKRVENELRKFRFISDNANDANFLLNPDGRFLYVNALACERLGYSEAELLQMSVP 581 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 +I+ P +H+ DG T V+ +E G++L Sbjct: 582 DIDPTYGTPCS-RPWTQRPGDRPAPFETLHRCRDGRTIPVEITLTSVEFQGERLRFATAR 640 Query: 238 DITEQKRLE-------EQLEHAAHHDAMTGLLNRRQFYHITEPGQM 276 DIT++KR+E E L A++ L Sbjct: 641 DITDRKRIEAAERRQRESLARLNEVSALSHLP----LEEQLRRALA 682 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 76/238 (31%), Gaps = 17/238 (7%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 IV P + +++ AN AA + D+ + + Sbjct: 312 IVRPGDHRIVDANEAASAFYGHSLARL-------------RTLRIDDIATEPQPFGADVL 358 Query: 78 QRKEEETALSCRLVLR----KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 R E E+ R R ++ + E G A + +Q Sbjct: 359 ARLESESGWHLRTRHRLASGEVRDVEVYAGPVGSGADLRIYAIVHDITERNIAEQELRKF 418 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F ++A I D +I N A + GY + Q +I+ H Sbjct: 419 KFFNDNASDAYILIDEDARIHYVNRATCDLLGYTEAELLQLTIPDIDPHYDVARVRAHFN 478 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 S G P H+ DGS V+ + +++ G + DIT +KR+E +L Sbjct: 479 SAKQGRVPPFESEHQRRDGSRFPVEVTSTALQVDGRWMAFTAARDITLRKRVENELRK 536 Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + F TN A L++ P D +IVDAN AA FYG++ + +I + Sbjct: 294 ANERRLRQIFETNHAIKLIVRPG-DHRIVDANEAASAFYGHSLARLRTLRIDDIATEPQP 352 Query: 186 V-MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 ++ + G L H+LA G R V+ YAGP+ D + IVHDITE+ Sbjct: 353 FGADVLARLESESG--WHLRTRHRLASGEVRDVEVYAGPVGSGADLRIYAIVHDITERNI 410 Query: 245 LEEQLEH 251 E++L Sbjct: 411 AEQELRK 417 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 5/144 (3%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 ++A RS + ++ P + + DG++++ N A L + Sbjct: 807 AIEADRSRRQLAASEARLQTII--DTEPECVSLRTPDGRVLEMNAAGLALVEADSVEALN 864 Query: 174 K-HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL- 231 ++ R G L F GS R + +A + ++ Sbjct: 865 AVGLPQLVAPAYREAFAALGRRVSAGESATLEFEIVGLRGSRRWIDAHATALRDASGEVT 924 Query: 232 -MLCIVHDITEQKRLEEQLEHAAH 254 +L + D+T+++ E QL AA Sbjct: 925 AILSVARDVTQRRDSEAQLRLAAT 948 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 90/409 (22%), Positives = 150/409 (36%), Gaps = 13/409 (3%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 ++ + V + I N LM P + + Sbjct: 397 FRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDDWQASEEA 456 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 +++ + E+ + + T + +G + L + + + Sbjct: 457 MKSLVTKEQKEITL---EKRYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITV-AK 512 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 + ++ + + ++ + +G I N GY+ + + I R Sbjct: 513 KAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPR-ILKSDR 571 Query: 185 RVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 E+ GH ++ DG + ++ + + I HDIT Sbjct: 572 HAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFHDIT 631 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E KR ++ LE+ A HDA+TG+ NR Q +LL D D FK IND Sbjct: 632 ELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSGGKLALLFFDLDNFKTIND 691 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSV 359 GH GDE+L L+R LE R GD + R GG+EF++LLP +D A +A + ++ Sbjct: 692 GLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPEIESVDAASHIATRMLDAL 751 Query: 360 AKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 G T SIG+ +L K D A+YRAK+ GRN Sbjct: 752 KAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMYRAKSMGRN 800 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 68/240 (28%), Gaps = 11/240 (4%) Query: 24 EQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI------LTV 77 + L++ + L++ P L L + +D+ E + Sbjct: 284 QHLLFEAQTMRRLIRPDFVEIGHMNPERWQHIAGLYVKLGMMGPDYDLSEFLYPEFKQRL 343 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q +E+ + + L I L + + + FF Sbjct: 344 QAGKEQAIRTTLIALGVFLFVGTGITAMLFFFNTRLSRQVQERTAALSASERSFRAFFEM 403 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHEISH 195 S + + + + N + GY+ + ++ M + Sbjct: 404 ASVGVAQFEGD-TRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDDWQASEEAMKSLVT 462 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 L + G P+ G+ + L +V DIT K+ EE+L AA Sbjct: 463 KEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKLLLAA 522 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 88/392 (22%), Positives = 151/392 (38%), Gaps = 10/392 (2%) Query: 23 EEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI-LTVQRKE 81 + +L N + LL L T Q L + + L + +I I + ++ Sbjct: 246 DNRLTINNQTSDLLATQKLSGDLLTQLNESLRQGILSVFFATLISAGGVIIIFRYLTQRS 305 Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 T L + TE E + ++ + ++A Sbjct: 306 LNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSIVDLDHQRKESEKQLLLSSSVFDNAV 365 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGG 199 ++ + DG I N A GY + + ++ I ++ + G Sbjct: 366 EGIVITNLDGIIEQVNPACEAMSGYRLKELIGENPR-IFRSDHHNSAFYQQMWQSLIEEG 424 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDA 257 ++ +G + + I HDI+E KR EE+L+H A+HDA Sbjct: 425 RWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQHQAYHDA 484 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +T L NR+ F+ +++ +D D FK+IND GH GD++L ++ Sbjct: 485 LTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISER 544 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRFT--VSI 374 L SC R+ D R GG+EF++L+P L I + +T VS+ Sbjct: 545 LLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSM 604 Query: 375 GVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 GV + ++ ++L K D A+YRAK G+N Sbjct: 605 GVTVFPDDADTPEDLIKNADIAMYRAKEAGKN 636 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 157/417 (37%), Gaps = 31/417 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG----PYSVSSQKELPKYLS 63 LD + +++V + ++ AN L + + L+ Sbjct: 379 ILDTSSVAIFLVD-RQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLA 437 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVL-RKLTETEPVIIFEGIEAPATLGLKASRSAN 122 L + +++ + + ++T L R + G+ A T Sbjct: 438 LLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQ--------- 488 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 +R+ + + + + G ++ N A GY+ ++ + Sbjct: 489 -RRQTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPR-LLSS 546 Query: 183 GRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHD 238 GR + + G ++ +G ++ + + D Sbjct: 547 GRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTD 606 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 ++ +K E+Q++ A +D +TGL NRR + + +LL ID D FK + Sbjct: 607 LSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTL 666 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLA 352 N+ YGH GD++L +A+ L R GD V R GG+ FV+LL + A + Sbjct: 667 NNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEAENTG 726 Query: 353 ETIRVSVAKVSI--SGLPRFTVSIGVAHHEGN--ESIDELFKRVDDALYRAKNDGRN 405 E IR+++++ R T SIGV + E IDE KR + A+Y+AK GRN Sbjct: 727 EKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRN 783 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 85/289 (29%), Gaps = 36/289 (12%) Query: 3 THNFNTLDLLTSPVW------IVSPFEEQLIYANSAA-KLLMQDLTFSQLRTGPYSVSSQ 55 T +++L +P + E + N ++L D + +V Sbjct: 228 TDKSRVMEVLPAPGGNPAIDRFLQGEEGSTVMRNPLGLEILASDKSLPAAGWVLAAVLPT 287 Query: 56 KELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVII------------ 103 E + +Q + + L + + L L T + Sbjct: 288 AEAFAPVRAMQQRMLLATSLLTLLAGLVVWWTIKRQLAPLLATARRLAAMADEKQALRAL 347 Query: 104 -FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALN 162 + + +R +++ + T+S + L+ R G+I AN Sbjct: 348 PVTHPDEIGQVVKGFNRLLGTLGQREALLQQILDTSSVAIFLV--DRQGRITKANQRMAT 405 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTY 220 +GY + + +R + ++ L + ++ AD + Sbjct: 406 LFGYPLHELQGMEYVALVHPAQRETGRKNMLALLDSALQSVDLERLYWRADQTEFWGHLT 465 Query: 221 AGPIEIYGD--KLMLCIVHDITEQKRLEEQLEH----------AAHHDA 257 + ++ ++ DIT++++ E +L A D Sbjct: 466 GQRFVDGNGEEQGLVGVIADITQRRQTEAELRIAAIAFESEQGMAITDP 514 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 23/423 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 F T ++ + + +Y N +A+ + + ++ D Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDF 81 Query: 66 QNQHD----IIEILTVQRKEEETALSCRLVLRKLTETEP-VIIFEGIEAPATLGLKASRS 120 + Q + + + ++E ++ F I T + Sbjct: 82 NKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEE 141 Query: 121 ANYQR---------KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + + + + + + + I N A + GY+ E + Sbjct: 142 LRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEV 201 Query: 172 CQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 ++ + R + G ++ +G I Sbjct: 202 IGQNPSILKSN-RHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVKG 260 Query: 230 KL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 ++ + + DI+E K + +++H A+HDA+TGL NR +L Sbjct: 261 EVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIAL 320 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLD 346 L ID D FK+IND G+ GD VL A + + D V R GG+EFV++L Sbjct: 321 LFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDKH 380 Query: 347 TALSLAETIRVSVAK--VSISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDG 403 A +A+TI A+ S T SIG+A + ++ L + D A+ +AK +G Sbjct: 381 DAAVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAKQEG 440 Query: 404 RNR 406 RNR Sbjct: 441 RNR 443 Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 4/129 (3%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + +A + L DG+ + N +A ++G E ++ + Sbjct: 16 SEEGFAFKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKE 75 Query: 187 MPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 +++++ +GS ++ ++ K+ CI DIT Sbjct: 76 TTAQDFNKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSH 135 Query: 243 KRLEEQLEH 251 K EE+L Sbjct: 136 KETEEELRK 144 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 81/415 (19%), Positives = 161/415 (38%), Gaps = 25/415 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + + + + + I NSA ++ L+ G + +++ Y++ Sbjct: 671 RFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSNEELLQLGTEDIHPEQDKEYYIA 730 Query: 64 DLQNQ---HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + V ++++ + + L + V + R Sbjct: 731 QFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLRIGDKVYLMGFF-----------RD 779 Query: 121 ANYQRKKQGFYAR-FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +++ + + + S+ +I DG I+ AN A + GY + ++ + Sbjct: 780 ITERKQTEDALRQGAAVFESSHNGIIITDLDGHILAANQAYADISGYTESELLGQNPRIL 839 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 N GR+ ++ G ++ +G + K + I Sbjct: 840 NS-GRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAVRNDQGKATHYVGI 898 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 D+++ ++ E + EH AH+D +T L NR Q +L +D DRF Sbjct: 899 SSDLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRF 958 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAET 354 K+IND G+ GDE+L L L R DL+ R GG+EF+L+L + + +A + Sbjct: 959 KNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARS 1018 Query: 355 IRVSVAKVSISGLPR---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + ++A+ + R SIG++ +S ++L + D A+++AK GRN Sbjct: 1019 LLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRN 1073 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 75/235 (31%), Gaps = 9/235 (3%) Query: 20 SPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQR 79 +P + + I N A + S LQ + + Sbjct: 568 APVDYEFIAVNPAFGKTTG---LKDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACH 624 Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 E + + + P F + T + ++ R + + F Sbjct: 625 WEHYLSALGKWFSFSIYSPAPG-EFVVVSEDIT---ERKQAETALRDSEDRFRSIFNNAI 680 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGG 199 +LL D + + N A GY++E + Q T +I+ + I + G Sbjct: 681 DGILLADSG-TRKFIMGNSAIARMLGYSNEELLQLGTEDIHPEQDKEYYIAQFAMMVRGE 739 Query: 200 HK-PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 N V K DGS + A P+ I ++ DITE+K+ E+ L A Sbjct: 740 STLSSNAVVKRKDGSVFYADIKASPLRIGDKVYLMGFFRDITERKQTEDALRQGA 794 Score = 81.7 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 69/238 (28%), Gaps = 31/238 (13%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR 149 L L + V + L AN ++ F+ M + P Sbjct: 377 LGLVAILIVFVVTSAVMLIWRQQQRLHRMELANRSSEQDKQLKLFYDLPFIGMAITSP-A 435 Query: 150 DGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL---NFV 206 + V AN + GY+ + + K W V + E + G Sbjct: 436 TKRWVYANDRLCDMLGYSRDDLL-KTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKR 494 Query: 207 HKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLE-HAAHHDAMTGLLN 263 DGS V K L++ +V DIT++K+ E L A + Sbjct: 495 FIRKDGSPITVNLDVKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATY-------- 546 Query: 264 RRQFYHITEPGQMQHL---AIAQDYSLLLIDTDR-FKHINDLYGHSKGDEVLCALART 317 R F ++ G + D F +N +G + G L + Sbjct: 547 RSLFDNMLN-GVAHYRMIFRDGAPV-------DYEFIAVNPAFGKTTG---LKDVVGR 593 Score = 78.6 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 74/260 (28%), Gaps = 31/260 (11%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE----LPKYLS 63 DL + I SP ++ +YAN ++ L+T ++ + L ++ Sbjct: 421 FYDLPFIGMAITSPATKRWVYANDRLCDMLGYSRDDLLKTAWIDLTHPDDVAGNLKEFER 480 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLR-KLTETEPVIIFEGIEAPATLGLKASRSAN 122 + + D I +++ + ++ L ++ + + T ++ Sbjct: 481 MVAGETDGFNIEKRFIRKDGSPITVNLDVKCTRRADGKPDLIVALVDDITQ---RKQTEL 537 Query: 123 YQRKKQGFYARFFLTNSAPM----LLIDPSR--DGQIVDANLAALNFYGYNHETMCQKHT 176 R K+ Y F + ++ D + + N A G + + + Sbjct: 538 ALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAFGKTTG--LKDVVGRKV 595 Query: 177 WEINM-----LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA-GPIEIYGDK 230 E+ + H P Sbjct: 596 SEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYLSALGK-----WFSFSIYSPAPGE--- 647 Query: 231 LMLCIVHDITEQKRLEEQLE 250 + + DITE+K+ E L Sbjct: 648 -FVVVSEDITERKQAETALR 666 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 82/401 (20%), Positives = 148/401 (36%), Gaps = 23/401 (5%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQ 78 V + Q +Y + + D + ++ ++ + + + + Sbjct: 347 VLDLQGQRLYNSPSYGQFFGDT-RDLRGSDSFADVHPEDRERVKRVFRQTTETGRGQEI- 404 Query: 79 RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK-QGFYARFFLT 137 E + +R + V+ EA + + + Q ++ + A F + Sbjct: 405 ---EYRLVRNDGSVRHMASAGRVLGDRQGEAARVVVVSRDVTERKQAEQWERIAATAFES 461 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-- 195 + + I+ N A + GY + + ++ GR + Sbjct: 462 QQ---GMFITDANAVILRVNQAFTDITGYAADECIGQTP-KLLSSGRHDASFYAAMRESI 517 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 G ++ +G + + + D++ K +E++ H A Sbjct: 518 ERNGVWQGEIWNRRKNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLA 577 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 +DA+TGL NRR + + + +LL ID D FK +ND GH GD +L Sbjct: 578 FYDALTGLPNRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQ 637 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTP--LDTAL----SLAETIRVSVAKVS--IS 365 + + L S R+GD V R GG+EFV++L + A + E I + + Sbjct: 638 VGQRLSSSVREGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSG 697 Query: 366 GLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 T S+G+ G + IDEL KR D A+Y AK GRN Sbjct: 698 HDYHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRN 738 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 48/162 (29%), Gaps = 7/162 (4%) Query: 95 LTETEPVIIFEGIEAPAT-LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 L V ++ L ++ + ++ R + + D G+I Sbjct: 172 LLIVFLVRSYQSRIDDVRRLASDLAQRTAELQAREADLNRAQAVANVGSWVYDL-VSGRI 230 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS 213 D + G T+ + + + + G P + +L G Sbjct: 231 -DMSAETCRILGLPTGTVGSLDAFMARVHPDDRDTLQQAAAAALRGE-PFDNELRLVFGE 288 Query: 214 T-RHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHA 252 T R + A K + L DIT +K+LE L Sbjct: 289 TTRWITQRAEVEFDEEGKPLRSLGTTQDITARKQLEASLREQ 330 >UniRef50_Q0F206 Hypothetical 918 kDa protein Y4LL n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F206_9PROT Length = 702 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 171/425 (40%), Gaps = 29/425 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 F T+ + V+ E ++ N A + +L+ P + Sbjct: 285 EYFETIMSSMGEMLFVTDSEHKIQLTNPAVLATLGY-QQHELKDKPLDALIDGGIELSAG 343 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + + D EI +++RK + V + + E + A R Sbjct: 344 EEKRLADEGEIKSIERKFLHKDGHS------IPVLITVSMMQYGENNVCQIIHAGRDITR 397 Query: 124 QRKKQG---FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 Q++ + A+ ++S +++ D + I+ N A GY+ + + ++ I Sbjct: 398 QKRIERDLSLAAKVMESDSNAIMICDHQAN--ILLVNPAFCVITGYSRDEVIGRNPR-IL 454 Query: 181 MLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 GR+ + L G +K DG + + ++ + I Sbjct: 455 SSGRQSAEFYRNLWDSLLSDGAWAGEIWNKRKDGGVYPERLSISAVCNDAGEITNYVSIF 514 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 +DI+EQK +E +L H AHHD +TGL NR F E L+ ID D FK Sbjct: 515 NDISEQKDIELRLSHMAHHDQLTGLPNRTLFIDRLEHALAHASRNKDKVGLMFIDIDGFK 574 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA-LSLAETI 355 +ND +GH GD +LC +A +L R D V R GG+EFV++L + DTA + +AE I Sbjct: 575 AVNDNHGHDVGDALLCIIANSLTELVRDADTVARIGGDEFVIILEKLLSDTAIIQVAEKI 634 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHEGNESI-DELFKRVDDALYRAKND--------GR 404 + +++ SIG+ + S +E+ K+ D A+Y AK GR Sbjct: 635 LNRFSVPTLAAGIACDIGCSIGITIGSDDSSSCNEIVKQADTAMYLAKTSGKQQYRIYGR 694 Query: 405 NRVLA 409 + V A Sbjct: 695 DCVAA 699 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 163/414 (39%), Gaps = 22/414 (5%) Query: 5 NFNTLDLLTSPVWI-VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSS---QKELPK 60 + + +P+ + + + + + ++ + S L Y V +K Sbjct: 476 EQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYDVHPDIPEKWRQA 535 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + L + + E + + + L R ++ + I + + + Sbjct: 536 HQRALAGER-LEEEEDLWIRADGQHLWTRWMITPWMDDSQTI------QGIIISSENISA 588 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++ F +S ML+ D I+ N A GY+ E + K+ +I Sbjct: 589 RKQAEEELRLAHTVFEHSSEAMLV--TDADNNIITINPAFSEMTGYSLEEVIGKNP-KIL 645 Query: 181 MLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 GR+ E+ G ++ G I KL + + Sbjct: 646 SSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVALF 705 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DITE+KR + + + A++D +T L NRR F + + ++LL ID DRFK Sbjct: 706 SDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDRFK 765 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETI 355 +ND GHS GD +L + ++ ++ D V R GG+EF +++ P + ++ +A+ + Sbjct: 766 EVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQRV 825 Query: 356 RVSVAKVSISGL--PRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNR 406 ++A + SIG+ + + EL K D A+Y AK +GRNR Sbjct: 826 LDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNR 879 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 80/259 (30%), Gaps = 18/259 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQL-------RTGPYSVSSQKELPK 60 +D + W I N ++ R + ++ + Sbjct: 350 IIDGTAAGTWEWDIRSGDCI-VNPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQA 408 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSC--RLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 + L+ + D + +R + + R + + + + G T A Sbjct: 409 LEAHLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAE 468 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 + ++Q + AP+ + RD + + + +G+ ++ + ++ Sbjct: 469 TTLKQAVEQQKMF-----IQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYD 523 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 ++ H+ + + + ADG + P + ++ Sbjct: 524 VHPDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQGIIISS 583 Query: 237 HDITEQKRLEEQLEHAAHH 255 +I+ +K+ EE+L AH Sbjct: 584 ENISARKQAEEEL-RLAHT 601 Score = 41.7 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 42/299 (14%) Query: 13 TSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 +S +V+ + +I N A + + P +SS ++ ++ +L N + Sbjct: 606 SSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNPKILSSGRQGKEFYQELWNTLETS 665 Query: 73 -----EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS--------- 118 EI ++ EE A + +E + + + T +A Sbjct: 666 GEWRGEIWNRRKSGEEYAEWLAIN-NIYSEDGKLFRRVALFSDITEKKRADALIWNQANY 724 Query: 119 --------RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYG-YNHE 169 R R +Q + +L ID + + N + +G Y Sbjct: 725 DLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLD---RFKEVNDTLGHSHGDYLLI 781 Query: 170 TM---CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI 226 Q+H E + +GR I + + + + A P ++ Sbjct: 782 EASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQR------VLDALAAPYDL 835 Query: 227 YGDKLMLCIVHDIT---EQKRLEEQLEH---AAHHDAMTGLLNRRQFYHITEPGQMQHL 279 G+ + L IT E +L A ++A NR F+ Q Sbjct: 836 EGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNRFSFFTPMMQAMAQAR 894 >UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0K3_9PROT Length = 1561 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 81/405 (20%), Positives = 149/405 (36%), Gaps = 15/405 (3%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 + + I P + + N+A + + S + + + + Sbjct: 889 VMQNSPMLISIKDPA-GRYQFVNNAFESIFALTPGSAIGNTDTQIFPESIAVLFEKL--- 944 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 D++ EE + + P+ +G + + ++ Sbjct: 945 HFDVLHKKNRVEAEERILIGDQQHWLSF-ICYPINDEKGSVGAVCSQVIIVTARRELDEQ 1003 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + +FF S +++ I+ N A + GY+ + K+ + G+ Sbjct: 1004 KKLTTKFFDAASEGLMI--TDSHQNIIKVNHAFVRMTGYDEADVIGKNPS-LLSSGKHED 1060 Query: 188 PIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 + H ++ DG+ + L + I DIT K Sbjct: 1061 TFYSAMWQEINQHGWWQGELWNRRKDGTHYLEWLTIHTLRDEHGHLTNYIAIFSDITLIK 1120 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 + +LE+ HD +T L NR + + ++L+ ID D FK++ND G Sbjct: 1121 AAQRRLEYMVAHDELTSLPNRNELRGRMAQTFARAQRHGGTFALMFIDLDNFKNVNDNLG 1180 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H GD +L +A L C R D V R GG+EF +LL + A+ I V+K Sbjct: 1181 HDYGDVLLQQVAERLGLCVRTEDTVARIGGDEFNVLLDDVSETQIANTAQRILDHVSKPY 1240 Query: 364 I--SGLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 + + SIG+A + + E I+ L K D A+Y+AK+ G++ Sbjct: 1241 LIKEQQVFVSASIGIAVYPKDAEDIETLTKNADSAMYQAKDKGKD 1285 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 68/234 (29%), Gaps = 13/234 (5%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 I+ E +L N A L + ++ P ++ + + + + + Sbjct: 780 ILLDQELRLQRYNKEAASLFGFSVHTLGKSIPGLAVPVIDVLE-----TAKLAMSDGIKR 834 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 Q++ ++ T + + G+ + + + Sbjct: 835 QKQMSFGGKHYNVLCFPYTSQDQTLG--GVIVTFIDQTELMEAQQEILSSKDRLTGVM-- 890 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 ++PML+ G+ N A + + + +I V+ L Sbjct: 891 QNSPMLISIKDPAGRYQFVNNAFESIFALTPGSAIGNTDTQIFPESIAVLFEKLHFDVLH 950 Query: 198 GGHK-PLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQ 248 ++ + D + PI + + V +T ++ L+EQ Sbjct: 951 KKNRVEAEERILIGD-QQHWLSFICYPINDEKGSVGAVCSQVIIVTARRELDEQ 1003 Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 25/239 (10%), Positives = 64/239 (26%), Gaps = 29/239 (12%) Query: 44 QLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVII 103 S++++ + +E + +E + L Sbjct: 659 LFLISFISLTAEPGEVHPEDRMPVNSSELEDELIATREHLQTVIEELETSNEELQALNEE 718 Query: 104 FEGIEAPATLGLKASRS-ANYQRKKQGFYARFFLT-------------------NSAPML 143 + + + + NS Sbjct: 719 MQAANEELQSSNEELEASNEELQSTNEELTTVNEELIVKGGELSLVNTELENLQNSTGFS 778 Query: 144 LIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKP 202 LI ++ ++ N A + +G++ T K + + V+ +S K Sbjct: 779 LILLDQELRLQRYNKEAASLFGFSVHT-LGKSIPGLAVPVIDVLETAKLAMSDGIKRQKQ 837 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 ++F G +V + + ++ D TE ++++ + D +TG+ Sbjct: 838 MSF-----GGKHYNVLCFPYTSQDQTLGGVIVTFIDQTELMEAQQEI--LSSKDRLTGV 889 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 8/293 (2%) Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + + +P ++ + I AN A + GY + K+ I Sbjct: 737 AIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPR-I 795 Query: 180 NMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 G+ + + G +++ DG+ P+ ++ L I Sbjct: 796 LHSGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSI 855 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DITEQK++E ++ AH D +TGL N+ A ++L +D D F Sbjct: 856 KEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHF 915 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 K+IND GH GDE+L LA+ ++ R D + R+GG+EF+L+LP T D A +AE I Sbjct: 916 KNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKI 975 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 +VAK T SIG+A + D+L++ D A+YRAK DGRN Sbjct: 976 LETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRN 1028 Score = 83.6 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 92/285 (32%), Gaps = 26/285 (9%) Query: 15 PVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 P+ I++ + ++ N A ++ ++ P S + + ++ Sbjct: 174 PLGILTERDMAGLFVNGAPVE---GVSLREVMHSPVLTVSHQT---PVFEMAGLMQASRY 227 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + ++ LVL +T + + + + + Sbjct: 228 RHLVVVDD-----AGLVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLI 282 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + P L+ +G + N F+G + K ++ + H+ + Sbjct: 283 VK--TIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFFRAHDRA 340 Query: 195 HLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLE 250 + + +V DG ++T P+ +L+ L I HDITE+ +++E Sbjct: 341 AMLADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIE 400 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 +T L N + + A+ ++ + D RF Sbjct: 401 R------LTQLYN---ALSQCNQAIVHSSSEAELFAQICQDAVRF 436 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 90/418 (21%), Positives = 162/418 (38%), Gaps = 34/418 (8%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT----------GPYSVSSQKE 57 ++L + ++ E Q++ NSA+++L+ L + E Sbjct: 609 IFEILPIGI-TLTDREGQIVECNSASEVLLGIPREEHLARKYDAKEWTIYRADGTAMPSE 667 Query: 58 LPKYLSDLQNQHDI-IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + L NQ I +++ V + T L+ V+ + I Sbjct: 668 EYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVSATPLNHPNYGVVVTYIDIS-------- 719 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT 176 ++ A F +++ + +I+D N GY E + + Sbjct: 720 ---DKRQAEERLNLAASVFTHAREGIMI--TDKHARILDVNKGFTQITGYEREEVLGLNP 774 Query: 177 WEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLM 232 +N G + + + GH ++ +G+ I+ + Sbjct: 775 NILNS-GCQSKEFYNLMWKTLFEEGHWSGEIWNRNKNGTVYPQMITITAIKNSDGMTQNY 833 Query: 233 LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 L + DIT K + QLEH AH+DA+T L NR + ++L ID Sbjct: 834 LALFTDITSLKEQQRQLEHIAHYDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDL 893 Query: 293 DRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL-DTALSL 351 D FK +NDL+GH GDE+L L++ +++ R+ D + R GG+EF+++L + Sbjct: 894 DGFKKVNDLHGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDCEMI 953 Query: 352 AETIRVSVAKV-SISGL-PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 + S ++ I G + SIGV + + D L + D A+Y+AK G+NR Sbjct: 954 LRRLLESTSESVDIEGEVVSVSASIGVTFYPKDNVDADLLMRHADQAMYQAKQSGKNR 1011 Score = 91.7 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 91/314 (28%), Gaps = 71/314 (22%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG------------------ 48 + + + I+ P +++ AN AA+ + Sbjct: 33 EFFERQGAVMLIMDPVTGKIVRANRAAENFYGYSRDELKKMSIQDLNTLTPKQVSKELAL 92 Query: 49 ----------------------------PYSVSSQKELPKYLSDLQ-NQHDIIEILTVQR 79 PYS +Q L + +L H ++ Q+ Sbjct: 93 AREEKRNYFIFHHRLAGGQTRQVAVHSIPYSFDNQSFLVSTIHELSSGSHQQQDLQHYQQ 152 Query: 80 KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF----- 134 EE L++ E + +I+ + A L L + +++ Q + Sbjct: 153 NLEELLQLQETELKESQERQSLILVLAVFTQAILILFLFYDISRRKQLQAELKQVATTLT 212 Query: 135 -FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + +S + +I +G I + N A GY+ + + K T + + + Sbjct: 213 NIMDSSTEVAVIATDTEGVITEFNSGAEKLLGYSAQELVGKETPLKFHSEKEIQARAQRL 272 Query: 194 SHLPGGHKPL----------------NFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 S + + DG V PI + L + Sbjct: 273 SEALKRPVKGFQVFTEKLKEDSPQDHEWTYARKDGVLVPVSLIVTPILDENHQKVGYLGV 332 Query: 236 VHDITEQKRLEEQL 249 D+TE +R ++ L Sbjct: 333 AQDVTELRRSQQAL 346 Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 19/246 (7%) Query: 21 PFEEQLIYANSAAKLLMQDLTFSQLRT-----GPYSVSSQKELPKYLSDLQ-NQHDIIEI 74 E ++ + + ++ + + + + L+ + +E Sbjct: 493 DIESNVMLWDERSCTMLGYPPEAFKMDYDKWASLLHPDDAYVMKRLKAHLEKGEAYSVEY 552 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 ++ + + + I GI T RS + + + Sbjct: 553 RIRSGDDDWVWVESQGQTIESDAKGRPIRMVGIYMDIT---DRKRSEDLLVENEERLRTI 609 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK-------HTWEINMLGRRVM 187 F P+ + R+GQIV+ N A+ G E + + + Sbjct: 610 FEI--LPIGITLTDREGQIVECNSASEVLLGIPREEHLARKYDAKEWTIYRADGTAMPSE 667 Query: 188 PIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEE 247 S + G + A P+ + + ++ DI+++++ EE Sbjct: 668 EYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVSATPL-NHPNYGVVVTYIDISDKRQAEE 726 Query: 248 QLEHAA 253 +L AA Sbjct: 727 RLNLAA 732 Score = 64.4 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 80/250 (32%), Gaps = 12/250 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIY--ANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 TLD + ++ V L + A+ L + + S + + +++ Sbjct: 355 ATLDTIPDLLFEVDKEGCILNFHTADIEKLYLKPEQFVGKRVNEVLPDSVGDVIFQAMAE 414 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 + + + + V K+ + V+ F + T ++ S+ + Sbjct: 415 ALETGRSQGLEYSLAQNGKQSCYELSVSTKINQKNEVVSFLFLARDVTARVQQSKELVEK 474 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT--WEINML 182 ++ +++ + D + ++ + + GY E + + Sbjct: 475 DERLELI-----LSASKIGQWDWDIESNVMLWDERSCTMLGYPPEAFKMDYDKWASLLHP 529 Query: 183 GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK---LMLCIVHDI 239 + + G + + + D V++ IE M+ I DI Sbjct: 530 DDAYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVESQGQTIESDAKGRPIRMVGIYMDI 589 Query: 240 TEQKRLEEQL 249 T++KR E+ L Sbjct: 590 TDRKRSEDLL 599 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 147/416 (35%), Gaps = 25/416 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 + + + +L+ N K L+ + + + Sbjct: 154 IFQSFPGGITLFD-ADLRLVAFNDQFKALLD-------LPDVLFEQPEPDFETLIRYNAA 205 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLT---ETEPVIIFEGIEAPATLGLKASRSANYQ 124 + + Q+ A + + V K+ + G+ + L + Sbjct: 206 RGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGTSLSIRGVPLASGGFLSIYTDITDR 265 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 ++ + + +I + I N A + GY+ E + + GR Sbjct: 266 KQSEEQLRIAAAAFESQTCMIITDANRVIQRVNRAFIETTGYSAEEAVGQTPR-LLQSGR 324 Query: 185 RVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDIT 240 E+ G + +G + + + +DIT Sbjct: 325 HGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDIT 384 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+K+ EE++ A D +TGL NR + + +LL ID D FK +ND Sbjct: 385 ERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLND 444 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLAET 354 GH GD++L +A L C R GD V R GG+EFV++L ++AE Sbjct: 445 TLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEK 504 Query: 355 IRVSVAKVSISGL--PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 I ++ + G + SIG +G ID+L K+ D ++Y+AK GRN V Sbjct: 505 ILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAV 560 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 7/144 (4%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 R R + FF ++ P L+ G I AN GY + Sbjct: 6 RRLVIRLEQALRTSEARLHSFF--DATPDALLISDAHGTITMANQQVEKLLGYVAAELVG 63 Query: 174 KHTWEINML-GRRVMPIMH-EISHLPGGHKPLN---FVHKLADGSTRHVQTYAGPIEIYG 228 K ++ + P++ E + P + N + DGS V IE Sbjct: 64 KSIEDLVPNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDE 123 Query: 229 DKLMLCIVHDITEQKRLEEQLEHA 252 + DI+E+KR EE+L Sbjct: 124 GMFFASALRDISERKRKEEELRRQ 147 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 27/263 (10%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 + D + ++S + AN + L+ + + + + + L+ Sbjct: 25 SFFDATPDAL-LISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLVPNRFKASH-PVLR 82 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLG-LKASRSANYQR 125 ++ +R A+ R + +E + + IE + A R + ++ Sbjct: 83 SEFTASP--RARRMGNGMAVKAR--RKDGSECDVDVSLSRIETDEGMFFASALRDISERK 138 Query: 126 KKQGFYAR-----FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH----------ET 170 +K+ R + S P + D ++V N ET Sbjct: 139 RKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDLPDVLFEQPEPDFET 198 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 + + + + I P DG+ + + Sbjct: 199 LIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGT----SLSIRGVPLASG- 253 Query: 231 LMLCIVHDITEQKRLEEQLEHAA 253 L I DIT++K+ EEQL AA Sbjct: 254 GFLSIYTDITDRKQSEEQLRIAA 276 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 96/414 (23%), Positives = 151/414 (36%), Gaps = 29/414 (7%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG-----PYSVSSQKELPKY 61 L + V L + A + L + + + Sbjct: 408 AIFQALPDLYFRVDHDSTILDF--KAGRRTDLYLEPEEFLGRRMTDVLPPPVATQFSGAI 465 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 L + + + + E RL+ ++ I A K R+ Sbjct: 466 DRILSGEARVDLEYVLPMPDGEQTFEARLLP---------LLQTQIIAVIRNITKRKRAE 516 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT----W 177 N R+ + Y F + + S G + AN A YGY+ Q H Sbjct: 517 NELRQAEEKYRSIFENATEG--IFQSSPSGSYISANPALARIYGYDSPQELQHHLTDIGR 574 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CI 235 ++ + R +H I G DGS + A + ++ Sbjct: 575 QLYVNPDRRQQFVHSI-LEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNILYFEGT 633 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 V DI+ +K+ E + + A HD +TGL NR F ++ +D DRF Sbjct: 634 VEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRF 693 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K IND GH+ GD++L +A+ L C R+ D + RWGG+EF LLLP ++ +AE Sbjct: 694 KVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIAER 753 Query: 355 IRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + S+ T S+G+A + E L + D ALYRAK +GRN Sbjct: 754 LLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRN 807 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 14/248 (5%) Query: 13 TSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 +S + + + ++Y + K L+ + + + ++ + Q Sbjct: 159 SSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLVHPQDRKQVQQTFQQAITHT 218 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVII----FEGIEAPATLGLKASRSANYQRKKQ 128 E E R L T ++ GI R+ + R+ + Sbjct: 219 EFTLTV---EYRFRHQDGSWRFLESTGRNLLADPAVAGIVVNTRDITDHKRTESALRQAE 275 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQK--HTWEINMLGRR 185 Y F + S +G+ + N A YGY + E + + Sbjct: 276 EKYRSIFENAVEG--IFQSSPEGRYIRVNPALARMYGYDSPEELLAHLTDIGRQLYVDPE 333 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 + DGS + +A + KL V +IT++K Sbjct: 334 RRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLLYYEGTVENITDRK 393 Query: 244 RLEEQLEH 251 R E QL Sbjct: 394 RTELQLLQ 401 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 84/260 (32%), Gaps = 18/260 (6%) Query: 4 HNFNTLDLLTSPVWI-VSPFEEQLIYANSAAKLLMQDLTFSQLRTG---PYSVSSQKELP 59 +D L V+ + + + Y + L + + G +++ ++LP Sbjct: 20 RFLRLIDSLPGIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQKGGEAFNAITHPEDLP 79 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFE-----GIEAPATLG 114 + L+ L E + E + + + E ++ E GIE T Sbjct: 80 RVLATLSAAIASSEP----YEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFITDI 135 Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 R+ + + + +++ L+ G ++ + GY+ + K Sbjct: 136 TPLKRAEAALIQAEARWRSLI--HNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGK 193 Query: 175 HTWEINMLGRR--VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAG-PIEIYGDKL 231 + + R V + + + + DGS R +++ + Sbjct: 194 SAFGLVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLLADPAVAG 253 Query: 232 MLCIVHDITEQKRLEEQLEH 251 ++ DIT+ KR E L Sbjct: 254 IVVNTRDITDHKRTESALRQ 273 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 162/355 (45%), Gaps = 15/355 (4%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 P+ + +L + + +T Q E++ + L+L + ++F G + Sbjct: 329 PEDIRELVQKQKNLLQVTHQ--EDQVQIYIFLLLATIFSLGFSLLFSGW--LNRKFTEYH 384 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R +++ ++ F S +++ D +++ N A ++ GY+ + + K+ Sbjct: 385 REIESKQRALSLASQVFDNASEGIMV--TGSDNRLLTVNDAFVDITGYSADEVVGKNPKF 442 Query: 179 INMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLC 234 + GR + + G+ ++ +G + + + Sbjct: 443 LQS-GRHDETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIA 501 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI-AQDYSLLLIDTD 293 + D+TE+K++EE+L + + D +T L NRR + + Q ++LL ID D Sbjct: 502 SITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLD 561 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLA 352 FK+IND GH GDE+L +A+ + R+GD V R GG+EF++L+P L+ A +LA Sbjct: 562 HFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELHKLEQAANLA 621 Query: 353 ETIRVSVAKV-SISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 E I ++A+ T S+G+A + +S D+L + D A++ AK GRN Sbjct: 622 ERILHNIAQPLENDSHLMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAKRQGRN 676 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 9/282 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + A +I +G I+ AN A GY E + K I G + Sbjct: 44 IIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKP-NILRSGLHDRKFYENMWE 102 Query: 196 LPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 G +K +G + + I D+T+ KR EQL Sbjct: 103 TIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRTMEQLAR 162 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 +++D +T + NR+ F + Q ++L +D DRFK+IND GH GD +L Sbjct: 163 LSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHYSGDILL 222 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISG--LP 368 +A L+ R D + R GG+EFV++LP+ + A+S+AE I S+ + Sbjct: 223 QKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFLLHHKDI 282 Query: 369 RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLA 409 + SIG++ + + + L +R D A+ +AK GRNR Sbjct: 283 YISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNRFEL 324 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 96/405 (23%), Positives = 146/405 (36%), Gaps = 32/405 (7%) Query: 23 EEQLIYANSAAKLLMQDLTFSQL------RTGPYSVSSQKELPKYLSDLQNQH-DIIEIL 75 + + + NSA + + + T Y + P++ LQ D +E Sbjct: 369 DGKPRWINSAVEAYIGYTVDECMALPDFAGTVIYPADIPRVAPEFQKALQGLRGDDLEFR 428 Query: 76 TVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF 135 V++ LS V I F T Q + + A Sbjct: 429 CVRKDGSLMWLSASWVPIT-DSKGEFIGFRTSGRDIT--------ERKQVEAELRIAAVA 479 Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + PM++ I+ N A GY E + + + GR E+ Sbjct: 480 FDSMEPMMI--TDASATILRVNSAFTECTGYTAEEIVGQTPRVLRS-GRHDDAFFQEMWE 536 Query: 196 L--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 G + +G + + HDITE+K EE+++ Sbjct: 537 EIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKE 596 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A DA+T L NR +LL ID D FK +ND GH KGD +L Sbjct: 597 LAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLL 656 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLAETIRVSVAKVSIS 365 +AR L + D V R GG+EFV++L + ++ E I + Sbjct: 657 QQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHL 716 Query: 366 G--LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 G R + SIG G++ SIDEL K+ D A+Y++K GRN V Sbjct: 717 GKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAV 761 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 63/242 (26%), Gaps = 23/242 (9%) Query: 31 SAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT-----VQRKEEETA 85 + + + ++D+ ++ + +++ A Sbjct: 240 PPGLTIAIYDGVETSAAALLHKTPEAPGHHRVTDMAANEYLVVGGHDWTLSMNAQDDFKA 299 Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN-------YQRKKQGFYARFFLTN 138 R + T + + R+ R+ + + + Sbjct: 300 RFGRNAALPIASTGTGLSLLLALLTWLMMTGRGRAMRLASAMTKELRENEEKFRAI--AD 357 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW--EINMLGRRVM---PIMHEI 193 I DG+ N A + GY + + + + Sbjct: 358 CTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTVIYPADIPRVAPEFQKAL 417 Query: 194 SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 L G L F DGS + PI + DITE+K++E +L Sbjct: 418 QGLRGDD--LEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRDITERKQVEAELRI 475 Query: 252 AA 253 AA Sbjct: 476 AA 477 >UniRef50_Q2W523 FOG: PAS/PAC domain n=5 Tax=Magnetospirillum RepID=Q2W523_MAGSA Length = 642 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 80/406 (19%), Positives = 148/406 (36%), Gaps = 20/406 (4%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS-VSSQKELPKYLSDLQN 67 L+ V + + ++++ANS ++ L + + L+ L+ Sbjct: 236 LEESPVGVSVSRRRDGKVVFANSRFTDIIGMSREEFLGSKAREHYVDDAQRQVVLAMLRR 295 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 + + R++ + L + L + I + + Sbjct: 296 DGRLDDAEVEFRRKNGSPFWSLLTIHPLDFENEPVNLAWIY----------DITERKAAE 345 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 Q + + ++ D +I+ N A Y E + K+ + GR Sbjct: 346 QQILLAAKVLETVTEAVVITDADNRIIFVNPAFTTITEYTKEEVRGKNPSFL-SSGRHDP 404 Query: 188 PIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQK 243 + + GH ++ G+ + + + DIT +K Sbjct: 405 EFYAGLWQVLSVSGHWAGEIWNRRKSGAFYAEWLSINALRDVSGAITHFVAVFSDITHRK 464 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 EE++ A++DA+TGL NR F Q + ++L+ +D D FK +ND G Sbjct: 465 EDEERIWRQANYDALTGLPNRSLFVDRLNQAVRQSKRDKKRFALMFLDLDGFKAVNDTLG 524 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV 362 H+ GD +L A L C R D + R G+EFV++L D +A I +++K Sbjct: 525 HAAGDVLLQQTAARLHQCMRATDTLARLAGDEFVVILEGVHDRDNPALVAGKILATLSKP 584 Query: 363 SISGLP--RFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 + SIG+A + + L +R D A+Y K G+N Sbjct: 585 YDLEVGTAHVRGSIGIALYPEDAADGPALIRRADTAMYAVKRRGKN 630 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 2/139 (1%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK 174 + S +A + + R + + + RDG++V AN + G + E Sbjct: 216 TERSEAAARLAESEARLWRMLEESPVGVSV-SRRRDGKVVFANSRFTDIIGMSREEFLGS 274 Query: 175 HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLC 234 E + + ++ + G + +GS P++ + + L Sbjct: 275 KARE-HYVDDAQRQVVLAMLRRDGRLDDAEVEFRRKNGSPFWSLLTIHPLDFENEPVNLA 333 Query: 235 IVHDITEQKRLEEQLEHAA 253 ++DITE+K E+Q+ AA Sbjct: 334 WIYDITERKAAEQQILLAA 352 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 119/298 (39%), Gaps = 10/298 (3%) Query: 117 ASRSANYQRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 +R + +R+ + + S+ ++ D +I+ N A + GY + Sbjct: 60 TARDISGRRQTERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSK 119 Query: 176 TWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL-- 231 + R ++ G ++ G ++ ++ Sbjct: 120 ASMLFS-DRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISH 178 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + + DI+E+K E +++H A +DA+T L NR Q ++L +D Sbjct: 179 FVALFTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVD 238 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALS 350 D FK+IND GH GDE+L +AR L R D V R GG+EFVL+LP A Sbjct: 239 LDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQ 298 Query: 351 LAETIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 +AE I ++ + G SIG++ I L D A+Y AK GRN Sbjct: 299 IAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRN 356 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 95/423 (22%), Positives = 156/423 (36%), Gaps = 26/423 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQ-KELPKYL 62 L+ V I + +++++AN L+ + + P + +E L Sbjct: 567 RVIQMLETSPIAVRIATSSGDKVLFANKRYTELINCPPDAVMGRNPKLYYAHAEEYDALL 626 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 + + + H I + L E + + R + I G T R+ + Sbjct: 627 AQVNSGHAINDKLIQLIVEGKGPVWAMASYRPVHYEGTAAIL-GWFYDVT---DLRRAQD 682 Query: 123 YQRKKQGFYARFFL-------TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + + ++ G+I AN GY+ E + + Sbjct: 683 ALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITYANDKFSEISGYSIEELLGQD 742 Query: 176 TWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KL 231 +N G E+ G ++ DGS V T P + Sbjct: 743 HAILNS-GYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQS 801 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + I DIT++K E++ + A +D +T L NRR + + +LL +D Sbjct: 802 YISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALLFLD 861 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------L 345 D FK +ND GH GD +L +A L +C R+GD V R GG+EFV++L Sbjct: 862 LDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQEVEAA 921 Query: 346 DTALSLAETIRVS-VAKVSISG-LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKND 402 A + E I + G T S+G+ N DEL K+ D A+Y+AK Sbjct: 922 AQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAKKL 981 Query: 403 GRN 405 GRN Sbjct: 982 GRN 984 Score = 68.6 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 86/249 (34%), Gaps = 10/249 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 N L+ + +W S + ++ + N+A + L + + ++ + L Sbjct: 441 TNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKL 500 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPA---TLGLKASRSAN 122 + E +V E + +R ++++ V+ E E+ + ++ Sbjct: 501 -AMKAVFEQSSVAL--EYRIVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLA 557 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDG-QIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ + ++P+ + + G +++ AN + + ++ Sbjct: 558 ADADRESKERVIQMLETSPIAVRIATSSGDKVLFANKRYTELINCPPDAVMGRNPKLYYA 617 Query: 182 LGRRVMPIMHEISHLPGGHKPLNFVHKLADGS-TRHVQTYAGPIEIYGDKLMLCIVHDIT 240 ++ +++ G + + +G P+ G +L +D+T Sbjct: 618 HAEEYDALLAQVN--SGHAINDKLIQLIVEGKGPVWAMASYRPVHYEGTAAILGWFYDVT 675 Query: 241 EQKRLEEQL 249 + +R ++ L Sbjct: 676 DLRRAQDAL 684 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 68/240 (28%), Gaps = 17/240 (7%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLT-----FSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 W + +LI++ + D + + ++ + H Sbjct: 324 WSLDWLTGELIWSEEIYHIFETDQHQFHANYEAFLNAVHP-CDREAVDCAFKASVVSHTP 382 Query: 72 IEILT--VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 EI + + R G T +++ +K Sbjct: 383 YEITHRLLLADGSVKWVHERGT-SDYDAAGNPTYSRGTVQDVTE----RQNSEALIRKTE 437 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ-KHTWEINMLGRRVMP 188 Y L + ++ + D ++ N A G + + + W + Sbjct: 438 SYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQ 497 Query: 189 IMHEISHL-PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRL 245 + + L + LADG+ R V + + ++C++HD+T ++ Sbjct: 498 AKLAMKAVFEQSSVALEYRIVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLA 557 Score = 42.0 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 9/155 (5%) Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 ++ + + + + +D G+++ + + + + Sbjct: 295 DVERTHAEQSLHRSKALLVEAQHIAQVGSWSLDW-LTGELI-WSEEIYHIFETDQHQFHA 352 Query: 174 KHTWEINM-LGRRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEIYGDK 230 + +N + H P H+L ADGS + V Sbjct: 353 NYEAFLNAVHPCDREAVDCAFKASVVSHTPYEITHRLLLADGSVKWVHERGTSDYDAAGN 412 Query: 231 LML--CIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 V D+TE++ E + + +T +LN Sbjct: 413 PTYSRGTVQDVTERQNSEALIRKTESY--LTNILN 445 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 89/403 (22%), Positives = 149/403 (36%), Gaps = 18/403 (4%) Query: 11 LLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHD 70 +W + E ++ N A + + + L + +K + LQ + Sbjct: 845 ASGDGMWDWNIKENKVYRTNMDA-SVSHWSSHNLLHENMHPEDREKFKYELAEHLQGRTP 903 Query: 71 IIEILTVQ--RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 EI + + R + + + G T + Sbjct: 904 FFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGTNRNITSRKLI---------EN 954 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 + NS ++ D +I N A GY+ + K+ + +R + Sbjct: 955 ELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYLVHLAYKQQRELF 1014 Query: 189 IMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLE 246 E L H + V + + + + DITE+K+ E Sbjct: 1015 NSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVFTDITERKKAE 1074 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 + L A D +TGL NR F Q +LL +D DRFKHIND GH Sbjct: 1075 QDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHV 1134 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVSIS 365 GD +L A A+ L++ R+GD V R GG+EF ++L A ++E + + + Sbjct: 1135 GDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLL 1194 Query: 366 GLPRFTV--SIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 T+ SIG++ + + ++ D L K D A+Y AK+ GRN Sbjct: 1195 EDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRN 1237 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 85/400 (21%), Positives = 157/400 (39%), Gaps = 11/400 (2%) Query: 15 PVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 W + + + N ++ + + Q+ +D++E Sbjct: 532 GFWDWNIVTGR-VDRNERWATMLGYTHKELKHSTNQWADFVHQ-EDREKAWQSINDVLEG 589 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + E L+ R + + V+ P + S N + ++ Sbjct: 590 RSKSHSLEYRMLTKEGGYRWVHDQANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAA 649 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + + A +I I+D N A N G++ E K+ + GR+ ++ Sbjct: 650 SVFSHAGEGIIITDDKATIIDINDAFTNITGFSREEAIGKNPRILQS-GRQTPEFYADMW 708 Query: 195 HLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 G+ ++ +G V + + + +DIT K + QLE Sbjct: 709 QALQNEGYWSGEVWNRRKNGEVYAVMQTISAVRDVHGIATHYVSLGNDITLMKEHQNQLE 768 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 H AH D +T L NR +Q Q +++ +D D FKH+ND +GH GDE+ Sbjct: 769 HIAHFDILTNLPNRVLLADRLSQAMLQCSRHKQSLAVVFLDLDGFKHVNDTHGHDIGDEL 828 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSI--SGL 367 L AL+ ++ R+ D + R GG+EFV +L T ++ + E + ++ ++ I + + Sbjct: 829 LIALSVRMKEALRENDSLARIGGDEFVAVLADLTTVEDCEPVLERLLLAASEPVIFDNIV 888 Query: 368 PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 + SIGV + + D L + D A+Y AK G+NR Sbjct: 889 LNISASIGVTLYPQDNVGADLLMRHADQAMYVAKESGKNR 928 Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 7/100 (7%) Query: 156 ANLAALNFYGYNHETMCQK-HTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADG 212 N L+ G + + + W+ + + + L G + + F K ADG Sbjct: 249 VNDEWLSILGLSRQDITNHISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVEFRMKHADG 308 Query: 213 STRHVQTYAGPIEIYGDKL----MLCIVHDITEQKRLEEQ 248 +Q IE + + DIT +K E + Sbjct: 309 RWVWIQGSGSVIEYDENTHEPVRLCGTHQDITVRKLAELR 348 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 147/394 (37%), Gaps = 13/394 (3%) Query: 21 PFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRK 80 I N +A+ + + + +E+ ++++ + + R Sbjct: 282 DSNLNCIEWNKSAEKIFGYSPDEVIGHALLEILVSEEIRDDINNIGKI--LFKGNKCTRS 339 Query: 81 EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSA 140 E + + P++ G T + + K A F + Sbjct: 340 SNENITKDGRTIICEWYSTPIVGVNGEVIGVTSLILDITESKQAELKLKHAASVFTHTNQ 399 Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PG 198 + G I++ N A GY + + ++ + GR E+ Sbjct: 400 G--ITITDTSGVIIEVNDAFSAITGYARDEVIGQNPRVLQS-GRHSPEFYREMWATLQAD 456 Query: 199 GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHD 256 GH +K + + K+ + + +DIT K +EQLE AH+D Sbjct: 457 GHWTGEIWNKRKNDEIYPEMLTISAVLDATGKVQNYVALFNDITAIKEHQEQLERIAHYD 516 Query: 257 AMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALAR 316 +T L NR +Q +++ +D D+FK +ND YGH GD++L ++R Sbjct: 517 TLTNLPNRTLLADRLTQSMVQVRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISR 576 Query: 317 TLESCARKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETIRVSVAKVSISGLP--RFTVS 373 L+ R D + R GG+EFV +L + + E + + + + + S Sbjct: 577 RLKEALRDIDTLARIGGDEFVAVLMDIEKGEDCEPVLERLLEAASGSVTVEGIMLKVSAS 636 Query: 374 IGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 +GVA + D+L + D A+Y AK++G+N Sbjct: 637 MGVAIYPQDGIDADQLLRHADQAMYVAKHEGKNC 670 Score = 77.9 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 23/238 (9%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETA 85 +I A A + +++ + F Y + +PK ++DL +Q ++ I + Sbjct: 48 IILAIDAFRTIVESVYFGLYFNSLYGL-----IPKSIADLLSQPALLIIPKLINIFAGVL 102 Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLI 145 + L+ R + I L + + + + F N I Sbjct: 103 VILLLIKRWVP--------RDIHERKEALLALHAAKSASVNNENLFNSIF--NGVTDACI 152 Query: 146 DPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHEISHLPGGHKPL 203 + IV N GY + + K I +H P Sbjct: 153 FADSNRNIVSINQGFELMMGYGIDELEGKTASIIYESDEEYERQGRIHFNLAAKEKVTPY 212 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEH----AAHH 255 ++ DGS +T I D++ + + D+T++K+ L+ +HH Sbjct: 213 EANYRHKDGSIIVGETSRIVIRTLDDQILGYVGFIRDVTDRKKATTALQESTAMLSHH 270 >UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5Y8_9GAMM Length = 1085 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 82/414 (19%), Positives = 148/414 (35%), Gaps = 19/414 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG---PYSVSSQKELPK 60 + ++ P +++ ++ + N A + Q+ + Sbjct: 266 KFRHLIEGSPIP-YLLLNANREVSFINQAFSDNYGYQLEHVQGGESWWKITAHPQRYRDE 324 Query: 61 YLSDLQNQHDIIEILTVQRKE-EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + + L + H + E E L + + L+ + F+ + + Sbjct: 325 FKAYLAHLHHGDKTQPPSSMELEINTLHGQTKVALLSTSFLQDTFDSELLLVVYDITVRK 384 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 A + + N A +I G I D N A G++ E + K +I Sbjct: 385 EAE-----EQLRFSSRVFNQAQEGIIITDTSGTITDVNPAFCEITGFSREEVLGKGP-DI 438 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 G+ ++ + G+ ++ +G I + + + Sbjct: 439 LNSGKHSPEFFSKMWQSIIEHGYWQGEVWNRRKNGELYAELLTISAITDDDGQSRHFVGL 498 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT+ K+ +E LE AH+D +T L NR F ++ +D D F Sbjct: 499 FSDITQTKQQQETLEMMAHYDVLTKLPNRVLFADRFSQAMAHSNRTETMLAICFLDLDNF 558 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K +ND YGH GD++L +A L R D + R+GG+EF +L + Sbjct: 559 KPVNDTYGHEVGDQLLIEVAVRLRKNVRDEDTISRFGGDEFAILFRDIESQSECEFMLRR 618 Query: 355 IRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I S+A+ R + S GV + N +D L + D +Y+AK GRN Sbjct: 619 IHESLAQPYNVNDTRIDISASSGVTFYPQENADLDTLLRHADQTMYQAKLAGRN 672 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 76/411 (18%), Positives = 148/411 (36%), Gaps = 13/411 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + D ++ ++ N L+ + + + Sbjct: 68 RYSDLYDFAPVG-YMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNGAVAQLFH 126 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L+ T+L +R + G L Sbjct: 127 HLRRVLSEP-GRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSDRKR 185 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + A+ F ++ +++ +IV N A GY+ + + ++ ++ G Sbjct: 186 EEDRLNLIAQVFERSTDAIMI--TDSLNRIVSVNRAFTTVTGYSADEVLGRNP-KLLASG 242 Query: 184 RRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 R E+ G ++ +G + + + + I +I Sbjct: 243 RHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEI 302 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 T+Q+ +++ AH+D +T L NR G ++L +D DRFK IN Sbjct: 303 TDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTIN 362 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVS 358 D GH GD +L +A+ L++ R+ D V R GG+EF+++LP + A +A I + Sbjct: 363 DSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEA 422 Query: 359 VAK--VSISGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 + + + + SIG++ + D L + D A+YR+K GRN+ Sbjct: 423 MEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQ 473 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 13/194 (6%) Query: 84 TALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPM 142 L RL + ++ E L + +R + R+ L + AP+ Sbjct: 19 RELEARLGALRAAPDTSSLVEELRVHQIELEAQNRELIEARRALEDARDRYSDLYDFAPV 78 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 + G I++ NL G + + G H L + Sbjct: 79 GYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNGAVAQLFHHLRRVLSEPGRV 138 Query: 203 LNFVHKL----ADGSTRHVQT-YAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH--- 254 + + + RHV+ + +L + D++++KR E++L A Sbjct: 139 FDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSDRKREEDRLNLIAQVFE 198 Query: 255 --HDA--MTGLLNR 264 DA +T LNR Sbjct: 199 RSTDAIMITDSLNR 212 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 14/413 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS-VSSQKELPKYL 62 + + +IV+ + N A + + S + E +++ Sbjct: 568 KFRRIFETIEDG-YIVTDMNGVIQMVNPATCAHLGYAESELVGQSMASLYADDNERARFV 626 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSA 121 L + ++ + ++ + ET + EG T ++A R Sbjct: 627 MALDATGAARGHQLTAKHKDGSRITVEASAHLVRDETGRAVAKEGTFRDITQRIEADR-- 684 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 R+++ Y F N + MLL+DP R G+IVDAN AA++FYGY +T+ +IN Sbjct: 685 -LLREREKQYRALFENNHSIMLLMDP-RTGRIVDANPAAVHFYGYPADTLRSMPFSDINA 742 Query: 182 LGRRVMPIMHEISHLPGGHKPLNF-VHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + I E+ + H+LADG R V+ Y+GPI + G++L+ ++HDIT Sbjct: 743 --QDETAIFKEMVDSRREKRSYFIHRHRLADGDIRDVEVYSGPIMVQGNQLLYSVIHDIT 800 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+ RLE +++ A D++TG NR +F+ + E + + ++L++D D FK IND Sbjct: 801 ERVRLEREMKRLATTDSLTGAANRHEFFRLAELELRRAMRYGHSLAVLMLDIDYFKSIND 860 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 +GH GD VL AL+ + + R D+ R GGEEF +LP T L + +A+ +R + Sbjct: 861 THGHQTGDAVLKALSALVRTTLRDTDIFGRLGGEEFAAVLPETDLAGGVLVADRLRRELG 920 Query: 361 KVSI---SGLPRFTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVLA 409 + + FTVSIG+ +E ID+ R D+A+Y+AK GRNRV + Sbjct: 921 ALKVRLRDIEVMFTVSIGLTETRKSERLIDDAINRADEAMYKAKRMGRNRVES 973 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 16/254 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 NT L V+I++P + +++ AN AA+ + Q + + E +L Sbjct: 443 RNTFVALGEAVFILTP-DARILDANPAARAMFQMTDEELAGASVELLHASHE--NFLEFE 499 Query: 66 QNQHDIIEILT------VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 Q + E R+++ + ++T + ++ G + Sbjct: 500 QRKKAAFEAGVQANFEFTMRRKDGDIFPTEHSVSRITCDDGTLL--GTVSVVRDISSRKW 557 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 + R+ + + R F + I +G I N A GY + + + Sbjct: 558 AEQKLRQSEEKFRRIFE--TIEDGYIVTDMNGVIQMVNPATCAHLGYAESELVGQSMASL 615 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVH 237 + + G + K DGS V+ A + + + Sbjct: 616 YADDNERARFVMALDAT-GAARGHQLTAKHKDGSRITVEASAHLVRDETGRAVAKEGTFR 674 Query: 238 DITEQKRLEEQLEH 251 DIT++ + L Sbjct: 675 DITQRIEADRLLRE 688 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 10/244 (4%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD----LQNQHDI 71 + + ++ N A + L + E D + + Sbjct: 323 IVVALDTAGRISLINRAGCTTLGYKESELLGQDWIDLIIPDEQRDESRDYLYCMFSGDAD 382 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 + + + + T+ G+ + T + + +K+ + Sbjct: 383 TDAEHTNYVTTRSGDHRLITWKNQLLTDESGAPAGVLSSGTDITEQRAAEQALSQKELWL 442 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 F+ + ++ P +I+DAN AA + E + ++ + Sbjct: 443 RNTFVALGEAVFILTPDA--RILDANPAARAMFQMTDEELAGASVELLHASHENFLEFEQ 500 Query: 192 E--ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEE 247 + G F + DG + I L+ + +V DI+ +K E+ Sbjct: 501 RKKAAFEAGVQANFEFTMRRKDGDIFPTEHSVSRITCDDGTLLGTVSVVRDISSRKWAEQ 560 Query: 248 QLEH 251 +L Sbjct: 561 KLRQ 564 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 20/266 (7%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFS---QLRTGPYSVSSQ------ 55 + L +PV+++ + N AA L+ + Sbjct: 173 FLTLFESLDTPVFLLDH-DLNASIMNLAAARLIGLAQEPGQVYYGQARAHGTPDFVGTGI 231 Query: 56 --KELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP--A 111 ++ +L+ + +E + + + + + + G + Sbjct: 232 SLRDRLPWLASELGRLCPLEPGQRACRFDASGETADGMRHFSVAVSHMDDVSGKFSHSIV 291 Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 +L R ++ + + +++ G+I N A GY + Sbjct: 292 SLEDITGRMDMERQLAREHERATHYLDIVGSIVVALDTAGRISLINRAGCTTLGYKESEL 351 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH----KLADGSTRHVQTYAGPIEIY 227 + ++ + + + + G + H G R + + Sbjct: 352 LGQDWIDLIIPDEQRDESRDYLYCMFSGDADTDAEHTNYVTTRSGDHRLITWKNQLLTDE 411 Query: 228 GD--KLMLCIVHDITEQKRLEEQLEH 251 +L DITEQ+ E+ L Sbjct: 412 SGAPAGVLSSGTDITEQRAAEQALSQ 437 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 88/422 (20%), Positives = 158/422 (37%), Gaps = 26/422 (6%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 L+ L P +++ ++I N A + L L + + + E L+DL Sbjct: 37 ELLEQLVVPTFVLD-ATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLADLV 95 Query: 67 NQHDIIEILTVQRKEEETALSC--------------RLVLRKLTETEPVIIFEGIEAPAT 112 + + EI + ++ + + PV G Sbjct: 96 LHNRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIAVV 155 Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC 172 L+ S + A F + +++ DP+ +I+D N + + GY+ E Sbjct: 156 ETLRDRTSHKLAELRLRQMASVFEHSQEGIMITDPAT--RILDVNASFVRVTGYSREEAL 213 Query: 173 QKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 + + G + + G ++ G + ++ + Sbjct: 214 GRTP-TLLKSGLQDAAFYRALWRDLNETGRWHGEIWNRKKSGELYPEILHINAVQDPSGR 272 Query: 231 --LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + + DIT+ K + +LE+ AH+D +TGL NR + + ++ Sbjct: 273 VTHYIGMFIDITDLKNSQSRLENLAHYDVLTGLPNRLLLGYRLRQALDDAQRHERLAAVC 332 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDT 347 +D D FK +ND +GH GD +L + R L R D V R GG+EFV+LL + Sbjct: 333 FLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARLGGDEFVILLNDLRNQEE 392 Query: 348 ALSLAETIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 ++ + VA + TVS+GV + + D L + D A+Y+AK GR Sbjct: 393 LDNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQAMYQAKQMGR 452 Query: 405 NR 406 NR Sbjct: 453 NR 454 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 82/415 (19%), Positives = 159/415 (38%), Gaps = 22/415 (5%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLR--TGPYSVSSQKELPKYL 62 ++ ++ + +V + +AN A ++ G S ++L ++ Sbjct: 31 YRLIVNEISDGI-LVLDADFVARFANPAMLRILGYSPDELDGVWAGDLVWSEAEDLGRFA 89 Query: 63 SDLQNQH--DIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + + + + R+++ +A R+ +P F+G + R+ Sbjct: 90 EETEKRRRGESGNYELRWRRKDGSARWSRISAT--ARFDPDGQFDGSLIVFQDITERKRT 147 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R +A F + + + R+G I+D N A + GY E + ++ + Sbjct: 148 DEALR----LWASVFANSREGIAI--TDRNGIILDVNEAFVRITGYGREEVIGQNPRILQ 201 Query: 181 MLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIV 236 GR + + ++ DG + + + + Sbjct: 202 S-GRHDSAFYAGMWESLYKASNWCGEIWNRRKDGEIYPQWLNISAVRDEESEVSHYISVF 260 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 D+++ K E++LE A+ D +TGL NR + + ++L +D D FK Sbjct: 261 MDLSQIKSNEKRLELLAYFDPLTGLANRTLLADHMRMAIARSRRESTLFALGYLDLDGFK 320 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETI 355 +ND +GH GD+ L +A+ ++S R D V R GG+EFV+L+ + E + Sbjct: 321 PVNDQFGHEVGDQFLQEIAKRIKSVVRGDDTVARLGGDEFVILVQGLRKPEECHHTFERL 380 Query: 356 RVSVAKVSISGLPRFTV--SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 + + T SIGV D L + D A+Y+AK G+NR+ Sbjct: 381 LAKLEEPIQLNGHHLTATGSIGVTLFPCDEADPDTLLRHADHAMYQAKEAGKNRI 435 Score = 94.4 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 5/151 (3%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 + L K ++ + + R + + ++ D AN A L GY Sbjct: 6 VNILILLESKTIQTRRIEMQADEEMYRLIVNEIS-DGILVLDADFVARFANPAMLRILGY 64 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 + + + ++ + E + G + DGS R + A Sbjct: 65 SPDELDGVWAGDLVWSEAEDLGRFAEETEKRRRGESGNYELRWRRKDGSARWSRISATAR 124 Query: 225 EIYGDK--LMLCIVHDITEQKRLEEQLEHAA 253 + L + DITE+KR +E L A Sbjct: 125 FDPDGQFDGSLIVFQDITERKRTDEALRLWA 155 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 87/415 (20%), Positives = 167/415 (40%), Gaps = 30/415 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAK---LLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 ++L + ++ + P E + +++ ++ + L+ + E Sbjct: 659 IVNLSPAVIYTLKPNAEGIFHSDFISENIYQITGYAKDEWLKDNFWLDHIHTEDLAA--A 716 Query: 65 LQNQHDIIEILTV-------QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L ++ + E ++ + +L L + + G T L A Sbjct: 717 LDSKKILFETGSLNHQYRFMHANGGYIWIEDQLTLTR-DNNGKPLEIVGAWLDITDRLSA 775 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 K + S+ ++ ++ +I+ N A GY + + K+ Sbjct: 776 EEKLRLNAK---------VFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPH 826 Query: 178 EINMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--L 233 + + + G G+ +++ +G I+ K+ + Sbjct: 827 ML-ASEKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHI 885 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 I+ DI+E+K EE+++ ++ D +T L N+ T+ + +L+ +D D Sbjct: 886 GIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLD 945 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE 353 RFK IN+ G S GD+V+ LA + R D V R GG+EF+LLLP T + A +A+ Sbjct: 946 RFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGAAHVAK 1005 Query: 354 TIRVSVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + VA+ + T SIG++ + ES ++L + D ALYRAK +GRN Sbjct: 1006 KLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRN 1060 Score = 83.6 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 16/141 (11%) Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 ++ + Y + F + A ++ Q + ANLAA N GY + ++ + Sbjct: 348 RQLAESRYQKLF--DQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINN 405 Query: 184 --RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITE 241 + + IS +P + ++ DGS + + I+ D+TE Sbjct: 406 VTKHPEFNTNLISDIPTKD---EWQYRRKDGSRFIAEVNCRKL---DKNYYFTIIRDLTE 459 Query: 242 QKRLEEQLEHAAHHDAMTGLL 262 +K E ++ H +T L Sbjct: 460 RKLAENRILH------LTQLY 474 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 95/409 (23%), Positives = 151/409 (36%), Gaps = 19/409 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS--DL 65 +D +W+ + N + + + + + + +L L Sbjct: 254 FIDSFEEHIWMKNVA-GIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGDRL 312 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 + + I+ E L KL P F G+ K Sbjct: 313 AIESGMPIIVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQLT 372 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + ++ R G I D N A GY E + ++ I GR Sbjct: 373 LATNVFKNSVE------GVVVTDRHGNITDVNGAFFEITGYVREELLGQNPR-IFSSGRH 425 Query: 186 VMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--GDKLMLCIVHDITE 241 ++ L G ++ +G+ I + + + DI+ Sbjct: 426 DKAFFDKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISA 485 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 QK E QL H A+ D +T L NR +F + Q + + ++ID D FKHIND Sbjct: 486 QKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDS 545 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLA-ETIRVSVA 360 +GHS GDE+L LA+ L S D++ R GG+EFV L+ + ++A +R Sbjct: 546 FGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFE 605 Query: 361 KVSI---SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + I R T S+GV+ + D L + D A+YRAKNDGRN Sbjct: 606 QPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRN 654 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 128/319 (40%), Gaps = 8/319 (2%) Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 L+ + E + R Q ++ Y + +S+ ++ + I Sbjct: 245 VLSLEHLIHEIESAYCSELEKVLVQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTI 304 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLAD 211 + N A GY + K I GR ++ G ++ + Sbjct: 305 MQVNPAFTQLTGYKEHEVIGKCPS-ILSSGRHDKSFYIKMWDAINKTGVWQGEICNRKKN 363 Query: 212 GSTRHVQTYAGPIE--IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYH 269 G I+ D + I DITE+K E+++ A+ D +TGL NRR F Sbjct: 364 GDIYIEWLTIIEIKEPNNSDAIYAAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFND 423 Query: 270 ITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVF 329 + +++ ID DRFK +ND GHS GD +L +A +E+ +GD + Sbjct: 424 RLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLA 483 Query: 330 RWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESID 386 R GG+EFV+L +D SLA+ I ++ T SIG A + + Sbjct: 484 RLGGDEFVVLCEINKIDAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSE 543 Query: 387 ELFKRVDDALYRAKNDGRN 405 L K D A+YR+K+ GRN Sbjct: 544 TLLKHADIAMYRSKDVGRN 562 >UniRef50_B9Z1H0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1H0_9NEIS Length = 753 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 95/421 (22%), Positives = 161/421 (38%), Gaps = 19/421 (4%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLR-TGPYSVSSQKELPKYLSDL 65 + ++ + ++ + + N A+ L Q L T +++ E + S Sbjct: 316 SLIEAMPDAIF-FKDGAGRWLITNGPARRLFQLQGNEWLGITDAALGAARPEFDELSSAC 374 Query: 66 QNQHDII--EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 Q ++ +E+ RL ++ + + + + N Sbjct: 375 QRDDELAWQAGKLCLFEEQLRDAEGRLHQFEVRKVPIFESDGRRKGLIVISRDVTEERNA 434 Query: 124 QRKKQGFYAR-FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHT---WEI 179 QR+ + R L +A + ++ N AA GY+ + + + Sbjct: 435 QREIERLSQRNELLLMAAGEGIYGLDEQERLTFINPAAQRMLGYSADELIGQVPPWRHPE 494 Query: 180 NMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCIVH 237 + R + G + DG PI G ++ Sbjct: 495 QVADDRPNACPVRQTLADGLPRRGCEAWFLRRDGRGFPAMLTVSPIGEPGRLSGVVVTFQ 554 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 D+TE+K+ E ++ A +D +TGL NRR + + +L ID D FK Sbjct: 555 DVTERKQAEAEIHRLAFYDPLTGLANRRLLHDRLAQAFAKSARQRSHGVVLFIDLDHFKA 614 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSL 351 +ND GH GD +L +AR L R+ D V R GG+EFV++L R + A + Sbjct: 615 LNDTLGHDVGDVLLVEVARRLVEAVREEDTVARLGGDEFVVMLERLGGELLPAAFQAERV 674 Query: 352 AETIRVSVAKVSI--SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVL 408 AE IR ++ + + R + SIG++ G + + DEL K D ALYRAK GRN V Sbjct: 675 AEKIRTALNQPYVLKGQPYRSSPSIGISLFLGEQKTRDELLKHADIALYRAKKAGRNTVR 734 Query: 409 A 409 Sbjct: 735 C 735 Score = 64.4 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 42/155 (27%), Gaps = 10/155 (6%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L + R+ + Q + + P + G+ + N A + Sbjct: 295 ALQAEGGRAEAEIKSSQERLSSLIE--AMPDAIFFKDGAGRWLITNGPARRLFQLQGNEW 352 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKP------LNFVHKLADGSTRHVQTYAGPIE 225 + + + A+G + PI Sbjct: 353 LGITDAALGAARPEFDELSSACQRDDELAWQAGKLCLFEEQLRDAEGRLHQFEVRKVPIF 412 Query: 226 IYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAM 258 + ++ I D+TE++ + ++E + + + Sbjct: 413 ESDGRRKGLIVISRDVTEERNAQREIERLSQRNEL 447 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 171/416 (41%), Gaps = 20/416 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 +P+W+ + N AA L + +++ + Sbjct: 793 KYRLLFYANPNPLWVYDVKTLAFLEVNQAAIEHYGYSREEFLGMTLRDIRPSEDVKILET 852 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + N + R + + T I F G +A L + Sbjct: 853 YIANINPSF-----NRSGYWQHRKSNGEIIDVEITSHGIEFAGRQARLVLVNDITEQLKA 907 Query: 124 QR---KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 Q+ + + + R + AP+ ++ + DG+I+ N A GY HE + W Sbjct: 908 QQKLQESENRFRRAVI--DAPLPILIHAEDGEIIQVNHAWTELTGYTHEDIPTIADWTEK 965 Query: 181 MLGRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCI 235 G R V ++ E+ + G + F + G TR + P+ +L++ + Sbjct: 966 AYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNFSSAPLGRLADNRRLIMSM 1025 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY-SLLLIDTDR 294 DITE+K+ EEQL HAA HD +TGL NR E + + +LL ID DR Sbjct: 1026 ALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKRTQQEEKYLFALLFIDLDR 1085 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAE 353 FK +ND GH GD++L A+A L++C R D V R+GG+EFV+LL T A +A+ Sbjct: 1086 FKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEFVILLENLTSRTEATKMAQ 1145 Query: 354 TIRVSVAKVS--ISGLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNR 406 I + +VSIG+ ES EL + D A+YRAK GR R Sbjct: 1146 QITDELRSSFCLQGQDFFISVSIGITFPSSYEESASELLRNADIAMYRAKEKGRAR 1201 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 12/241 (4%) Query: 14 SPVWI-VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS--VSSQKELPKYLSDLQNQHD 70 PV + ++ N + ++ + E ++ +Q+ + Sbjct: 682 IPVMLAYIDPNYNFLWVNEEFERILGWSLEEIKNLNILAQLYPDPDERQYVMNYIQSAEE 741 Query: 71 IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 E R T + KL+ GI T+ R+ + Sbjct: 742 KWEDFKT-RLRNGTTIDTSWANVKLSNGA----IIGIGQDITVRKHI---EEALRESEQK 793 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM 190 Y F N P+ + D + ++ N AA+ YGY+ E +I + Sbjct: 794 YRLLFYANPNPLWVYDV-KTLAFLEVNQAAIEHYGYSREEFLGMTLRDIRPSEDVKILET 852 Query: 191 HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 + + P ++ + H+ ++G V+ + IE G + L +V+DITEQ + +++L+ Sbjct: 853 YIANINPSFNRSGYWQHRKSNGEIIDVEITSHGIEFAGRQARLVLVNDITEQLKAQQKLQ 912 Query: 251 H 251 Sbjct: 913 E 913 Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 72/254 (28%), Gaps = 22/254 (8%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS---- 63 L+ +W + ++ Y + + + + + Y + P++L Sbjct: 548 ALEGSGDSIWEWNLQTGEI-YCDQSWWQKLGYEPDHETMS--YEWWRSQVAPEFLPIHEA 604 Query: 64 ----DLQNQHDII--EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + + + E + +S R E + G T ++ Sbjct: 605 SLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARGKSVANDEEGNPLKIVGTHRDIT---ES 661 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 +++ P++L + + N G++ E + + Sbjct: 662 KEIEEELKQQGELLQTIVDY--IPVMLAYIDPNYNFLWVNEEFERILGWSLEEIKNLNIL 719 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 + +F +L +G+T + ++ I Sbjct: 720 AQLYPDPDERQYVMNYIQSAEEKWE-DFKTRLRNGTTIDTSWANVKLSNGA---IIGIGQ 775 Query: 238 DITEQKRLEEQLEH 251 DIT +K +EE L Sbjct: 776 DITVRKHIEEALRE 789 Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 85/256 (33%), Gaps = 15/256 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++ L + ++ SP + +L Y +S K ++ T + S E + Sbjct: 290 KYERLVERLPAVIYQFSPTKGKL-YCSSYVKSILGYSTDEIDLPWLWINSIHPEDLPKVK 348 Query: 64 DL---QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 ++ Q EI + + + ++ EG+ T K + Sbjct: 349 EMIQEFVQGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIEGVAIDITETKKTQMA 408 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK--HTWE 178 + F +++P+ +I+ D ++ + A +G+ E + K W+ Sbjct: 409 LQQAHQCL-----TFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGWQEWQ 463 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGDKL--MLC 234 + + + ++ G + Y ++ +L Sbjct: 464 FVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEILSILS 523 Query: 235 IVHDITEQKRLEEQLE 250 +V D++EQKR E L+ Sbjct: 524 LVLDVSEQKRAEAALQ 539 Score = 80.9 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 5/184 (2%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 +E ++ K +E ++ T +++ G + + +K + Y Sbjct: 74 LEDKQLEGKRDEQLDLIGGIINGALLTMMIVVTVGRQLYLGQLNILKKIKQALKKSRSRY 133 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + L+ DG + N A ++ E + +K + + + + Sbjct: 134 RAIVEEQTE--LICRFRPDGTLTFVNEAYYRYFEKTPEYLLEKIFLPLIPFPDQQQVLDN 191 Query: 192 EISHLPGGHK-PLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQ 248 S ++ G R Q I K+ + DITE K++E Sbjct: 192 LKSLNQQKRVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGRDITELKQIETA 251 Query: 249 LEHA 252 L Sbjct: 252 LREL 255 Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 81/285 (28%), Gaps = 37/285 (12%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++ T + P + L + N A + L + + + L Sbjct: 132 RYRAIVEEQTELICRFRP-DGTLTFVNEAYYRYFEKTPEYLLEKIFLPLIPFPDQQQVLD 190 Query: 64 DLQNQHDIIEILTVQRK----EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 +L++ + ++T + + E + +I F+ + T + Sbjct: 191 NLKSLNQQKRVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGRDITELKQIET 250 Query: 120 SANYQRKKQGFY--------------ARFFL-------------TNSAPMLLIDPSRDGQ 152 + ++ + P ++ S Sbjct: 251 ALRELNEELEQRVEQRTLQLEAQIQERQAVEKALMESEAKYERLVERLPAVIYQFSPTKG 310 Query: 153 IVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD- 211 + + + GY+ + IN + +P + E+ K +++ D Sbjct: 311 KLYCSSYVKSILGYSTDE-IDLPWLWINSIHPEDLPKVKEMIQEFVQGKNFEIEYRVKDA 369 Query: 212 -GSTRHVQ-TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 G + G + ++ + DITE K+ + L+ AH Sbjct: 370 QGQWHWILDRSIGRQAADQEMMIEGVAIDITETKKTQMALQ-QAH 413 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/260 (9%), Positives = 77/260 (29%), Gaps = 20/260 (7%) Query: 8 TLDLLTSPVWIVS-PFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVS-----SQKELPKY 61 T + SP+ ++ + ++ +S A+ + + G + Sbjct: 417 TFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGWQEWQFVYEEDLDLIVAK 476 Query: 62 LSDLQNQHDIIEILT-VQRKEEETALSCRLV-LRKLTETEPVIIFEGIEAPATLGLKASR 119 +S++ + +T + + C+ + ++ ++ + + R Sbjct: 477 VSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEILSILSLVLDVSEQ---KR 533 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE-TMCQKHTWE 178 + + Q + + + + + + + GY + W Sbjct: 534 AEAALQVSQERLQLALEGS--GDSIWEWNLQTGEIYCDQSWWQKLGYEPDHETMSYEWWR 591 Query: 179 INMLGRRV---MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL---M 232 + + + + + L + + + G + + + + Sbjct: 592 SQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARGKSVANDEEGNPLKI 651 Query: 233 LCIVHDITEQKRLEEQLEHA 252 + DITE K +EE+L+ Sbjct: 652 VGTHRDITESKEIEEELKQQ 671 >UniRef50_Q1JZ53 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ53_DESAC Length = 946 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 80/413 (19%), Positives = 153/413 (37%), Gaps = 24/413 (5%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 + + + + +V + AN A L+ + T V K ++ Sbjct: 279 YQDLFNTVADGL-VVRDVNGHFLMANQAFLSLLGYREEELIGTHCTKVCKDKNCERFAEI 337 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 LQ + + + R E+ + ++ F+G T L + R + Sbjct: 338 LQGRTIVFKSTHTTRNGEKIP---------VEVNSTLVSFKG----DTAVLSSVRDIRER 384 Query: 125 RKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 +K+ + + ++ ++ G I+ N A GY+ E + K G Sbjct: 385 LEKEEQLKQLMTVVENSNDGVLVTDVTGSIIAVNRAFCRISGYDEEDVLGKTPRMFQS-G 443 Query: 184 RRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDI 239 + G ++ DG + + + + I D+ Sbjct: 444 IHDKSFYQAMWNELAQYGQWQGEIWNRNKDGESYPEMLSIRALTDDAGTVYRYVGIFADL 503 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 + +K LE+++ H A D +TG+ NR F + ++ + D FK IN Sbjct: 504 SNEKALEKKVLHLAQTDPLTGMANRVLFRDRLQQAIKHAQRHVTTLAVYSLGLDHFKKIN 563 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL-PRTPLDTALSLAETIRVS 358 D GH GD++L +A+ L+ C R D R G+EF L+ A ++A I + Sbjct: 564 DSLGHVIGDKILIEVAKRLKKCLRGEDSFCRHSGDEFTLMTYGGADAMDASTVATKILNA 623 Query: 359 VAKVSISG--LPRFTVSIGVAHHEGNESID-ELFKRVDDALYRAKNDGRNRVL 408 + I T SIG+A + S D L ++ ++A++++K +GR+ Sbjct: 624 IRLPFIVDGSELFLTASIGIALFPRDSSDDLGLMQKAENAMHQSKKNGRDCFC 676 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 127/319 (39%), Gaps = 11/319 (3%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 + I +E + + + +K + + +++ G I+ Sbjct: 262 MDNIMSDIELAYVEELHQIVQQRDIALRESKKHLLVAEKIIEASLDGIMI--TDEQGTII 319 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADG 212 N A GY + + +I GR ++ L G +K + Sbjct: 320 SVNPAFTRVTGYKEAEVLGLN-SKILSSGRHTSDFYQQLWLCILEQGVWQGEIWNKRKNS 378 Query: 213 STRHVQTYAGPIEI--YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHI 270 I +K+ I DI+E+K E+++E+ A +D +T L NRR F+ Sbjct: 379 EIYPQWLTIIEISEGVDNNKVFAAIFSDISERKLAEKRIENLAFYDELTQLPNRRLFFDR 438 Query: 271 TEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR 330 + +L ID D FK +ND YGH GD +L + A+ L +++GD V R Sbjct: 439 VDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVAR 498 Query: 331 WGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESID 386 GG+EF LLL +D I + + T SIG+A + + + Sbjct: 499 IGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVYPEDGTNEE 558 Query: 387 ELFKRVDDALYRAKNDGRN 405 EL K D A+YRAK+ GRN Sbjct: 559 ELMKNADIAMYRAKDIGRN 577 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 85/406 (20%), Positives = 160/406 (39%), Gaps = 9/406 (2%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 L W +I N L+ + R S + L++ Sbjct: 335 VLGSSELGFWDWDIRN-DIIERNEHCAALLGCDIDTLNRQQKLWGDSIH-PEDRVRVLRS 392 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 + T Q K E + + ++ V+ + P + + + +R + Sbjct: 393 IKAHLSGETEQHKVEYRIRTLASETLWILDSGKVMSRDESGCPLRMCGIHTDITDRKRVE 452 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN-MLGRRV 186 + + N++ + G I++ N A + GY + ++ + R Sbjct: 453 ESLKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQNIKILQCSRNNRS 512 Query: 187 MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG--DKLMLCIVHDITEQKR 244 ++ G + +G V + + + + DITE+K+ Sbjct: 513 AYEQMHMAVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQ 572 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 E+ + A++D +TGL NRR ++ + Q ++L+ +D D FK +ND GH Sbjct: 573 AEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGH 632 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVS 363 GD +L A+ L++C R D+V R GG+EF ++L T + +A+ I +A+ Sbjct: 633 DMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPY 692 Query: 364 ISGLPR--FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 G + SIG+ + + +I+ L K D A+Y AK++GRNR Sbjct: 693 NLGEETAYISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNR 738 Score = 57.5 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 50/202 (24%), Gaps = 36/202 (17%) Query: 113 LGLKASRSANYQRKKQGFYARFFLT----NSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 LG+ SR +R ++ L +S M + + + N + Y Sbjct: 182 LGILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTE 241 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAGPIEI 226 + + ++ + H + L G L D + + + Sbjct: 242 QELLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVACQRV 301 Query: 227 YGD-KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH------- 278 +L++ + T QK E++ A Sbjct: 302 QSRVELIITGFLNRTSQKEAEKE--KLAS-------------QEQLGLVLGSSELGFWDW 346 Query: 279 -------LAIAQDYSLLLIDTD 293 +LL D D Sbjct: 347 DIRNDIIERNEHCAALLGCDID 368 >UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV29_DESOH Length = 458 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 90/414 (21%), Positives = 166/414 (40%), Gaps = 25/414 (6%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 +++ ++ E ++ Y N AA+ ++ + L +S+ + + + Sbjct: 46 MRAINVSARDAVLMMDAEGRVSYWNPAAERILGYTSDEALGRNLHSLLAPQHYRRLFEAA 105 Query: 66 QNQHDII----------EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 + + +++ +E + L +L + + GI + Sbjct: 106 FPEFQRSGCGNNVEKTMRLKALRKNGDEFPVELSLAGVQLHDGWHAV---GIIRDISNRE 162 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + + R+ + + + AP+ + G+ ++AN AA GY E + + Sbjct: 163 LSDK---ALRESEDKFRTYMEK--APLGIFVADHTGRCLEANQAACRMSGYTEEELLELS 217 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCI 235 + + + G + + + +G + A I G +L Sbjct: 218 LQDFLAPDFSGVGMASFKKLKTEGRVDGDLMVRGKNGKNFWINLVATTI---GPDRVLAY 274 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT +K+ EE+++ A+HDA+TGL NR+ F Q + + +++D D F Sbjct: 275 CQDITRRKQTEEEIQKMAYHDALTGLPNRKLFSDRLGIALAQARRDQKGIAAIILDLDNF 334 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K +ND +GH GD +L A A L + RK D V R GG+EFVL+LP + +A+ Sbjct: 335 KDVNDTFGHDVGDRLLQAAAERLSAALRKSDTVARLGGDEFVLILPDLKGTEDVDRVAQK 394 Query: 355 IRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I + T SIG+A + S L K D A+Y+ K GRN Sbjct: 395 IVDGFRNPFSIDTHQLIVTTSIGIAVYPRDGISEVLLLKHADIAMYQVKQAGRN 448 >UniRef50_A4BMS6 Sensory box protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMS6_9GAMM Length = 881 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 93/411 (22%), Positives = 166/411 (40%), Gaps = 21/411 (5%) Query: 13 TSPVWI-VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQH-- 69 + +W+ E +++ N AA+ + G + S + D H Sbjct: 203 NADIWLNTLDKEGRIVIWNKAAERISGYRRDE--VQGRTDIWSWLYPDEAYRDWIFSHAM 260 Query: 70 DIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 DI+E TV E T + R++ + + + +R +R+ + Sbjct: 261 DILERGTVAFDLETTIRTKDS--RQIILSWRSRMLTNTAGETVGSIAVARDVTLERRAEE 318 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 L +R+ + N A +GY E + + E+ + + Sbjct: 319 ALQLHASVFETAEPLAIANRERVFLRVNHAFTRMFGYPAEEITGRTLLELQ-PDQSPEDL 377 Query: 190 MHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL 245 + + DG+ V+ + + + DI+E+K Sbjct: 378 FARLWGELEATDQWSGELWERRRDGTLIPVRLTMSTVRDGEGTITHYVAHWQDISERKTF 437 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 E Q++ A +D +TGL NRR E + + +LL +D DRFK IND +GH+ Sbjct: 438 EAQIQCQALYDPLTGLPNRRLANSRLEQELGRAQRLTGFGALLFLDLDRFKQINDAHGHA 497 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL---PRTPLDTAL---SLAETIRVSV 359 GD +L ++A+ L++ R D+V R GG+EFV+LL P T + A + E I ++ Sbjct: 498 IGDALLASIAQRLQNLLRIEDMVARLGGDEFVVLLGSEPGTRDEAAARAHRVGEKILAAI 557 Query: 360 AKVSISG--LPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 + + S+G+A + + + +L +R D A+YRAK DGRN + Sbjct: 558 REPIAIDAYELSVSASVGIALYPDVDMNAADLLQRADSAMYRAKEDGRNTI 608 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 92/285 (32%), Gaps = 16/285 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++ + I+ + ++++AN + +++ QL P+ + Sbjct: 72 QYRFMVERAEEGIAIL--QDGRIVFANPSLGAILR-CRQQQLLGQPFERYVPASQRGRVR 128 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + + E + + E + ++ + ++ + R+A Sbjct: 129 AIHRRQIDGEAASHCYEMELLHADGCEISVQVRSHVEDQGGQVLQFVFVRDISVQRAAAE 188 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH-TWEINML 182 Q + Y ++A + L ++G+IV N AA GY + + + W Sbjct: 189 QVRALNEYMDSI-IDNADIWLNTLDKEGRIVIWNKAAERISGYRRDEVQGRTDIWSWLYP 247 Query: 183 GRRVMP--IMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIV 236 H + L G + D + + + + + + + Sbjct: 248 DEAYRDWIFSHAMDILERGTVAFDLETTIRTKDSRQIILSWRSRMLTNTAGETVGSIAVA 307 Query: 237 HDITEQKRLEEQLEHAA----HHDAMTGLLNRRQFYHITEPGQMQ 277 D+T ++R EE L+ A + + + NR + + + Sbjct: 308 RDVTLERRAEEALQLHASVFETAEPL-AIANRERVFLRVNHAFTR 351 >UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QQF1_PERMH Length = 784 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 81/416 (19%), Positives = 153/416 (36%), Gaps = 22/416 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 N D + I+ +I +N + + + + EL KY Sbjct: 376 KYRNLFDNSNDAI-IIHDLSGTIIDSNRKSVEIFGYNRIDLALINVQDLYLEDELLKYKW 434 Query: 64 DLQN--QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 + ++ TV R + + + + + I+ RS Sbjct: 435 AVNKLLDDRFVKYETVLRSKLGRTFPAEIS----SSLFEIRGKKYIQDIIRDITDRKRSE 490 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + + + ++ R+G ++ N + Y + + + + Sbjct: 491 HELKLASMVFEYTLE------GILILDREGNVLRVNKTFADITDYTEDEVLNHNVLNL-P 543 Query: 182 LGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 + M +I G F K +G + + ++ + I+ Sbjct: 544 PFKTNENFMKQIWKEVKIKGEWQGEFWGKRKNGESFPMWFTFISARGNRGQVINYILIIT 603 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT +K E++L+ A +D +TGL NR FY+ + ++ + +++ +D D FK Sbjct: 604 DITNRKIEEKKLKKLAFYDGLTGLPNRLLFYNRLQHTLLRARRNREYVAVMFLDLDGFKQ 663 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIR 356 +ND YGH GDE+L + + L+ RK D V R G+EF +++ + +A+ I Sbjct: 664 VNDTYGHDIGDELLKEVGKRLQHTVRKIDTVARLAGDEFTVIIENLNSPENVNVIAKKIL 723 Query: 357 VSVAKVSISGL--PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLA 409 S + + SIG+A D L K D A+Y AK G+NR + Sbjct: 724 NSFKEPFVINGNKINVGTSIGIAVFPLDGTDADTLIKNADMAMYLAKKSGKNRYVV 779 Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 12/243 (4%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDL-----TFSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 W + + A +++ + + + + K L+ Sbjct: 260 WQWFVDSNRFWLSKEACEIICGENKEFNGFIKEFYNFVHPEDKPLLITKRKEILEKGKPY 319 Query: 72 IEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 + V+ E + R + + L E + GI T ++ + + Sbjct: 320 EFVYRVRPGENRPEIVIREITKVLRDENGNITRVIGIIQDVTNQT---KTYQKIIENEEK 376 Query: 131 YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM 190 Y F +++ +I G I+D+N ++ +GYN + + ++ + + Sbjct: 377 YRNLF--DNSNDAIIIHDLSGTIIDSNRKSVEIFGYNRIDLALINVQDLYLEDELLKYKW 434 Query: 191 HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 L V + G T + + EI G K + I+ DIT++KR E +L Sbjct: 435 AVNKLLDDRFVKYETVLRSKLGRTFPAEISSSLFEIRGKKYIQDIIRDITDRKRSEHEL- 493 Query: 251 HAA 253 A Sbjct: 494 KLA 496 Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 6/97 (6%) Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGST 214 N + GY+ E + H HE + + + Sbjct: 153 YVNKKIKDILGYDPEEVIGMHYMNFVPSE------YHEKLTSSDLTRKFEIELITKNKNR 206 Query: 215 RHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 V+ A E + I+ DITE+K E L+ Sbjct: 207 IAVEVSASEAEFDNRSSNIWIIRDITERKEKENLLKE 243 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 140/352 (39%), Gaps = 22/352 (6%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + R + L+ + +R+L E + E + + +R + + + Sbjct: 296 WVLARGVMDRGLAEEMRIRELNEQLEQRVLERTARLESANQELNREIAERSRAEAELRIA 355 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + + ++ G I+ N A + GY+ E + + + GR + + Sbjct: 356 AIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRK-RTMLTSGREDAALDDAMW 414 Query: 195 HLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 G + +G V ++ G + DIT++K +E+QL Sbjct: 415 ETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLH 474 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 A +D +T L NRR +++ ID D FK +ND GH GD + Sbjct: 475 KLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRL 534 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-----TALSLAETIRVSVA---KV 362 L +A+ L+S R+ D V R GG+EFV+++ D ++A I ++ ++ Sbjct: 535 LAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRL 594 Query: 363 SISGLP--------RFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRN 405 T SIG+ + ++DEL K+ D A+Y+AK+ GRN Sbjct: 595 VFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRN 646 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 149/404 (36%), Gaps = 19/404 (4%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQL-RTGPYSVSSQKELPKYLSDLQNQH------- 69 I + + N A+ ++ + R P EL ++L Sbjct: 383 IATDPRGIITVFNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRYTELGADRGTPIKDF 442 Query: 70 -DIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 D + T E ++ + + L ++ +++++ Sbjct: 443 ADYMAHATTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGYLGIAQDITERKRQE 502 Query: 129 GFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + + +P +I G I AN GY+ + K+ + G Sbjct: 503 NTLRKLSQVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHGKNPR-LLKSGETSA 561 Query: 188 PIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 ++ G F +K DGS P+ + L I DIT++K Sbjct: 562 EEYRDLWTTITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRK 621 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 R EEQL+H A HD +TGL NR E + + + LL+D DRFK IND G Sbjct: 622 RYEEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLDRFKIINDSLG 681 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKV 362 HS GD +L A L R D V R GG+EFV+LL + +A+ I + Sbjct: 682 HSFGDRLLQIAADRLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAP 741 Query: 363 SI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDG 403 T S+G++ + E + L + D A+Y+AK +G Sbjct: 742 FQIADREITVTASLGISIYPQDGEDEETLIRNADIAMYQAKEEG 785 Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 58/304 (19%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTF------SQLRTGPYSVSSQKELPKY 61 L ++ ++ +I N+ L++ + L Y Sbjct: 208 ALKASKQGLYDLNVQSGNMI-VNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVY 266 Query: 62 LSDLQNQHDIIEILTVQRK--EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + L + + QR + + + + + G + T ++ Sbjct: 267 RNYLAGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEE 326 Query: 120 SANYQRKKQG-------------------------------FYARFFLTNSAPMLLIDPS 148 +++ L ++ + +I Sbjct: 327 QTRKAEREKADLLEEAQQARLTLQRLFEEQTLASAEIERTSRLLAEVLNAASEVSIIATD 386 Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG---------- 198 G I N A GY+ E M + T + L + E+ G Sbjct: 387 PRGIITVFNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRYTELGADRGTPIKDFADYM 446 Query: 199 ------GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + + + G V + + L I DITE+KR E L Sbjct: 447 AHATTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTLR 506 Query: 251 HAAH 254 + Sbjct: 507 KLSQ 510 Score = 43.2 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 43/152 (28%), Gaps = 8/152 (5%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 ++ + V I++ + + YAN + P + S + + DL Sbjct: 511 VVEQSPTAV-ILTDPQGNIEYANPKFTQITGYSLTEVHGKNPRLLKSGETSAEEYRDLWT 569 Query: 68 QHDIIEILT---VQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANY 123 ++++ + + + + + F I+ T + + Sbjct: 570 TITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQH 629 Query: 124 QRKKQG---FYARFFLTNSAPMLLIDPSRDGQ 152 R L + ++ R G+ Sbjct: 630 LATHDNLTGLANRALLQDRLEQSILFAKRSGR 661 >UniRef50_Q8D5N8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepID=Q8D5N8_VIBVU Length = 664 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 87/420 (20%), Positives = 150/420 (35%), Gaps = 29/420 (6%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQL---RTGPYSVSSQKELPKYLS 63 N + + W + + N ++ +L Sbjct: 243 NVIRGTDAGTWYWNIKTGAARF-NPRWADIIGYQLEELTPVSIDTWMKYVHPSDLKLSQR 301 Query: 64 DLQ----NQHDIIEILTVQRKEEETALSC--RLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + DI E R ++ + R + + + + G + Sbjct: 302 RLSDYFSGKTDIYECEVRMRHKDGHWVWVLDRGRVAQWDDDGQPLEMFGTHVDISES--- 358 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + + A F ++ G IVD N A GY + + Sbjct: 359 ----KARESQLELAANVFKYVHEG--IVITDSKGMIVDVNQAFTYISGYEKSELEGQTL- 411 Query: 178 EINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI--YGDKLML 233 ++ G H++ L G+ +K +G +E + Sbjct: 412 KLLKSGMHDEDFYHDLWEMLLSRGYWRGEIWNKRKNGEVCPDLLTISKVEDSREDGVRFV 471 Query: 234 CIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTD 293 + DI+ K E QLE AH+D +T L NR + ++L +D D Sbjct: 472 ALFSDISALKEHEHQLEKIAHYDPLTELPNRLLLKERMAQAMERSKRNNYYLAVLFLDLD 531 Query: 294 RFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLA 352 FK +ND +GH GD+VL +A ++ R+GD + R GG+EF++L+PR LA Sbjct: 532 GFKEVNDTFGHDAGDDVLYHVAARMKDLVREGDTLARLGGDEFIILVPRVRDSYDIEPLA 591 Query: 353 ETIRVSVAKVSISGLPRFT--VSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNRVL 408 + S+++ G T SIGV+ + G E D L ++ D A+Y+AK G+N + Sbjct: 592 QRFLHSISQPIAIGKEEITLSASIGVSIYFGGEQQDSDSLIRQADQAMYQAKLAGKNCYM 651 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 18/406 (4%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTG---PYSVSSQKELPKYLSDLQNQHDIIEI 74 +V + + + N+AA ++ L + S P + + +N I Sbjct: 103 LVVDKDAVIEFVNAAACNILGYSEIEMLGKNSHELFHHSHPDHTPYPIEECKNLSVIQTE 162 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 E+ ++ I + + + +R + Sbjct: 163 QPYVSDEDYFW-RKDGTCFPVSLITTPIRLKENTKGIVIAFHDITQSVEERTRLREMQAA 221 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 +P+ ++ + I+ N GY + + + T +I + ++ ++ Sbjct: 222 IE--QSPVSVLIVDKQKNILYVNPQITKSTGYTRKELYGQKT-DIFRGDQTPNNVLPDLW 278 Query: 195 HL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + G +++ DGS P+ ++ + DITE+ +L+ L+ Sbjct: 279 KIIKSGSTWKGELLYQRKDGSVFWQSWNIAPVLDNHGEIQHFAAVGEDITEKMKLQSLLQ 338 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 ++ D +TG+ NRR+F + A+ +++++D D FK ND GH GD+ Sbjct: 339 EMSYMDGLTGIANRRRFDDFLTHEWYRAARYAKPLAIIMMDIDFFKRYNDSLGHLAGDDA 398 Query: 311 LCALARTLESCA-RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR 369 L + L+S R+ DL+ R+GGEEF+ +LP T + A AET+R +V + + Sbjct: 399 LKRVVHALKSRVLRRTDLLARYGGEEFICILPDTNVIDATLFAETLRQAVCALQLPHPDS 458 Query: 370 -----FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLA 409 T+S+GVA E L D+ALYRAK GRNRV Sbjct: 459 NISSFVTISVGVACCTPREGEPSNLLGLADEALYRAKTLGRNRVEV 504 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 38/259 (14%) Query: 45 LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIF 104 + P+ ++++ L + L + Q + E + Sbjct: 1 MPEKPHISNNKQALQAEIERLNKIIKALIDRAEQDMNSPRTDFGVFQNTIILEDQVQKRT 60 Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFF--LTNSAPMLLIDPSRDGQIVDANLAALN 162 + +E K +R+ +K+ + +T++ L+ +D I N AA N Sbjct: 61 QELEEALQTNTKITRALQQAKKQVELSEHYLRDITSALGEGLLVVDKDAVIEFVNAAACN 120 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLN---------FVHKLADGS 213 GY+ M K++ E+ F DG+ Sbjct: 121 ILGYSEIEMLGKNSHELFHHSHPDHTPYPIEECKNLSVIQTEQPYVSDEDYFW--RKDGT 178 Query: 214 TRHVQTYAGPIEI-YGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITE 272 V PI + K ++ HDIT+ +L + Sbjct: 179 CFPVSLITTPIRLKENTKGIVIAFHDITQSVEERTRLREM-------------------Q 219 Query: 273 PGQMQHLAIAQDYSLLLID 291 Q S+L++D Sbjct: 220 AAIEQS-----PVSVLIVD 233 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 148/396 (37%), Gaps = 21/396 (5%) Query: 22 FEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL----SDLQNQHDIIEILTV 77 + I N ++ LR ++ + L L + I Sbjct: 225 LDGHWIRVNQRLCDILGYSREELLRLTLQDITHPADQDSDLVMTRRLLSGEIPSFSIEKR 284 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 R+ + L + + G L ++ + + Q F + Sbjct: 285 YRQRRGQLVWANLTAALMRDEG------GRPEYFILVVEDISARKQSEEAQQLALTVFDS 338 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH-- 195 +++ D R +I+ N A Y E + + + + I Sbjct: 339 MLEGVIITDHHR--RILAVNAAFGEITRYPVEALLGRTPP-LWRTAHQDAAFYRRIWRQL 395 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAA 253 L G H+ DG+ + + + + + +DI++ K +EQLE A Sbjct: 396 LASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLA 455 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 H+D +TGL NR E + A +++ ID DRFK IND GH GDE+L A Sbjct: 456 HYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVA 515 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS-ISGLPR--F 370 +A+ L R+ D + R GG+EF++++ P+ S+A + V + SG Sbjct: 516 IAQRLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYV 575 Query: 371 TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 SIG++ + S EL + D A+Y AK G N Sbjct: 576 GASIGISLYPGDGRSASELIRNADAAMYLAKAQGSN 611 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 77/247 (31%), Gaps = 15/247 (6%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQ--LRTGPYSVSSQKELPKYLSDLQNQ--HDII 72 W + +++ AA+ L+ R + + + + L Sbjct: 95 WEYDSARREFLWS-GAARQLLGLPASETRTERGTLLQRVAAGDRARVATVLDAMLAEGSG 153 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 + + + RL + + E + G+ ++ + R+++ + Sbjct: 154 SVEFCRAGTGAAPVWLRLHYQVHLDEEAPGLVLGVLQDISVQKAQD---DALREREQLFR 210 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 F A + + DG + N + GY+ E + + +I + ++ Sbjct: 211 GTFE--QAAVGIAHLGLDGHWIRVNQRLCDILGYSREELLRLTLQDITHPADQDSDLVMT 268 Query: 193 ISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQ 248 L G ++ G A + G + + +V DI+ +K+ EE Sbjct: 269 RRLLSGEIPSFSIEKRYRQRRGQLVWANLTAALMRDEGGRPEYFILVVEDISARKQSEEA 328 Query: 249 LEHAAHH 255 + A Sbjct: 329 -QQLALT 334 >UniRef50_C4L7R2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7R2_TOLAT Length = 658 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 10/297 (3%) Query: 115 LKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 L+ + +RK + + +++P ++ D +I+ N A GY E + Sbjct: 346 LQVRTALTERRKNEAAMQLASTVLDASPGGIMVTDADKRIIAVNPAFTRITGYALEDILH 405 Query: 174 KHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL 231 ++ I G++ + G+ +++ DG + + Sbjct: 406 QNPR-ILSSGQQDEMFYQTMWQSIEQHGYWEGELINRRKDGQLLPELLSISKVFDKEGNV 464 Query: 232 --MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 + + DI+ ++ E ++++ AHHD +T L NR + ++ Sbjct: 465 MNYVGMFLDISARREAEARIQYLAHHDYLTNLPNRLLLVEHATQALTLARRYKRRMAIFY 524 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTA 348 ID DRFK IND YGH+ GD +L +A+ L S R+ D V R GG+EFV+LLP D+ Sbjct: 525 IDLDRFKPINDQYGHNVGDVILKTVAQRLLSIVRESDTVCRQGGDEFVILLPEFMDTDSL 584 Query: 349 LSLAETIRVSVAKVSISGLPRFT--VSIGVAHHEG-NESIDELFKRVDDALYRAKND 402 LA +R + K S++ + T SIG+A + +++D + + D A+Y AK D Sbjct: 585 EILAIKLRDEIQKPSMANGYQLTISASIGIATYPDNGDTVDAIIQSADTAMYSAKAD 641 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 5/122 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL-- 65 LD + + + ++++I N A + L P +SS ++ + + Sbjct: 368 VLDASPGGIMV-TDADKRIIAVNPAFTRITGYALEDILHQNPRILSSGQQDEMFYQTMWQ 426 Query: 66 -QNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANY 123 QH E + R+++ L L + K+ + V+ + G+ + +A Y Sbjct: 427 SIEQHGYWEGELINRRKDGQLLPELLSISKVFDKEGNVMNYVGMFLDISARREAEARIQY 486 Query: 124 QR 125 Sbjct: 487 LA 488 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 157/447 (35%), Gaps = 47/447 (10%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 +++L ++ + + N A + + + +L K Sbjct: 139 RYKRLVEILPDIIYRID-ANGYFTFINEAV-QVFGYEPDELIGKHFSELIHPDDLKKVSR 196 Query: 64 -DLQNQH--DIIEILTVQRKEEETALSCR---LVLRKLTETEPVIIFEGIEAPATLGLKA 117 ++ +++ + T + +E R + ++ + E K Sbjct: 197 SEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQIIKWPKKH 256 Query: 118 SRSANYQR------------------------------KKQGFYARFFLTNSAPMLLIDP 147 + ++ +P ++ Sbjct: 257 EKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAVEQSPAMIAVT 316 Query: 148 SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH---EISHLPGGHKPLN 204 DG+I N G+ E + K+ +I G + + + G Sbjct: 317 DTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLSMADKTLWKAITSKGEWKEA 376 Query: 205 FVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 F + G I+ L I+ DITE K+ EE++ + A++D++T L Sbjct: 377 FSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALP 436 Query: 263 NRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA 322 NR F+ + Q ++ ID DRFK +ND GHS GD +L +A L+SC Sbjct: 437 NRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCI 496 Query: 323 RKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHH 379 R+ D V R GG+EFVLLL + A + + I + + I + SIG+A + Sbjct: 497 REEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALY 556 Query: 380 E-GNESIDELFKRVDDALYRAKNDGRN 405 + + L K D A+Y +K GR+ Sbjct: 557 PGDGTTAEALLKNADSAMYISKESGRD 583 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 46/195 (23%), Gaps = 47/195 (24%) Query: 104 FEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNF 163 +G T+ R + G L P ++ +G N A + Sbjct: 111 IDGDSLARTMRYSMERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEA-VQV 169 Query: 164 YGYNHETMCQKHTWEINMLGR---------------------RVMPIMHEISHLPGGHKP 202 +GY + + KH E+ + E Sbjct: 170 FGYEPDELIGKHFSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTG 229 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIYGDK------------------------LMLCIVHD 238 L K S +++ I+ + ++ D Sbjct: 230 LQIRVKSKK-SPEYMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRD 288 Query: 239 ITEQKRLEEQLEHAA 253 IT K EE + + Sbjct: 289 ITGSKHAEEMICTLS 303 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 152/417 (36%), Gaps = 27/417 (6%) Query: 4 HNFNTLDLLTSPVWIVS-PFEEQLIYAN-----SAAKLLMQDLTFSQLRTGPYSVSSQKE 57 ++ + + V+ E +L+YA+ A + Q Sbjct: 259 RFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSLVVPEDWPH 318 Query: 58 LPKYLSDLQNQHDIIEILTV--QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGL 115 + + L H E+ + E +S R + K F+G Sbjct: 319 VQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIK-DHQGQPCWFDGALLNI---- 373 Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + +Q + +A ++ + QI+D N A G+ + ++ Sbjct: 374 -----HEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRN 428 Query: 176 TWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KL 231 +I GR + + GH + +G I Sbjct: 429 P-KITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISH 487 Query: 232 MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLID 291 + + +DI+ QK E+QLE +D +T L NR F + SLLL+D Sbjct: 488 FVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVD 547 Query: 292 TDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALS 350 DRFK IND GH GDE+L +++ L + RK D V R GG+EF ++LP + A Sbjct: 548 LDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAH 607 Query: 351 LAETIRVSVAKVSI--SGLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGR 404 +AETI + SIG+A H + + D L D A+++AK G+ Sbjct: 608 VAETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGK 664 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 99/414 (23%), Positives = 174/414 (42%), Gaps = 17/414 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS---VSSQKELPK 60 + ++ + + + ANS + ++ S + + Sbjct: 573 RYRALFENAQVGIFRTRISDGRFMEANSRIIEMYGWPDRAEFMEKMRSTEWYVDSEARGR 632 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 + L + + I R+ + + + + + G+ T A + Sbjct: 633 MVGTLLRRGEFRNIEVEMRRRDGSTVW-----FEYSGKLDGDTIIGVAQDVTQRRAAEAA 687 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + Y F +A + +G+ +D N A GY + E++ Sbjct: 688 RQR---SEAHYRLLFE--AAADAIFLHDPEGKFLDVNEVACRRLGYTRRELLAMTPRELD 742 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 G H+ +G+ V+ +A ++ G ++L I DIT Sbjct: 743 AEEFAEQVGERIRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVVLSIARDIT 802 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 ++KRLE+ L A D +TG+ NRRQF+ E + + + ++L++D DRFK +ND Sbjct: 803 DRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVND 862 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA 360 +GH GD VL + + R+ D++ R GGEEF +L T LD AL+ AE +R +V Sbjct: 863 RFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVE 922 Query: 361 KVSISGLP---RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVLAA 410 ++ + R TVSIG+A + ++D++ +R D ALY AK GRNRV+ A Sbjct: 923 EMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLA 976 Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 73/260 (28%), Gaps = 26/260 (10%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLT--FSQLRTGPYSVSSQKEL------- 58 LD + W + +L Y + ++ + F + +L Sbjct: 312 ALDAASEAHWDWNFETGEL-YCSPRYYEMLGYVPGEFECTHDALRDLMHPDDLCEVTTAL 370 Query: 59 -------PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPA 111 + ++ + + + R + E G Sbjct: 371 CMPDPAVSHAVEACGVGQFEVQFRLRAKGGDWKWMLARGRVLARREDGSPARVVGTHMDI 430 Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 T + + + + F ++A + ++ R G +V N A GY + M Sbjct: 431 TAAVS---QRLALGRSEELFRGIF--STASVGIVLLDRFGLLVRVNDACARMLGYATDEM 485 Query: 172 CQKHTWEINMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 +H + + L + DGS A P+E Sbjct: 486 RGQHFSRFMHDDETTLAATTLTSLLDRTQSTSRLQHRLRGKDGSYLWTDISASPLEGPNG 545 Query: 230 KL--MLCIVHDITEQKRLEE 247 ++ L I+ DI EQ+ ++ Sbjct: 546 EVEAALAIIVDINEQRTAQQ 565 Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 65/241 (26%), Gaps = 13/241 (5%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG----PYSVSSQKELPK 60 + + ++ F L+ N A ++ T + + Sbjct: 447 FRGIFSTASVGIVLLDRF-GLLVRVNDACARMLGYATDEMRGQHFSRFMHDDETTLAATT 505 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 S L + R ++ + L + L P E A + + Sbjct: 506 LTSLLDRTQSTSRLQHRLRGKDGSYLWTDISASPLE--GPNGEVEAALAIIVDINEQRTA 563 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEI 179 Q + Y F + DG+ ++AN + YG+ + +K Sbjct: 564 QQAQEDSERRYRALFENAQVGIFRTRI-SDGRFMEANSRIIEMYGWPDRAEFMEKMRSTE 622 Query: 180 NMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDI 239 + M G + + + DGST + ++ + D+ Sbjct: 623 WYVDSEARGRMVGTLLRRGEFRNIEVEMRRRDGSTVWFEYSGKL----DGDTIIGVAQDV 678 Query: 240 T 240 T Sbjct: 679 T 679 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 84/384 (21%), Positives = 142/384 (36%), Gaps = 27/384 (7%) Query: 36 LMQDLTFSQLRTGPYSVSSQKELPKYL---SDLQNQHDIIEILTVQRKEEETALSCRLVL 92 L QDL P+ + S + + +L + E+ L Sbjct: 173 LKQDLFKDLYHDNPFILVSIYNINAHKLLERELADAKQAAEL-------------ANHAL 219 Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFF-LTNSAPMLLIDPSRDG 151 + + + + A T + + + + Q + + +I Sbjct: 220 LESHDKLEATVAQRTAALKTSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITDAAN 279 Query: 152 QIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKL 209 ++++ N A + GY + + + + R E+ G + Sbjct: 280 RVMEVNPAFVRITGYPADEVIGRDPGFMKSH-RHTHEFYAEMWKKIWQTGQWQGEIWDRR 338 Query: 210 ADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQF 267 +G + L+ + I DI+ K EE+LE A D +T L NR F Sbjct: 339 HNGEIYPKWLTINAVYDERGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHF 398 Query: 268 YHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDL 327 + L+ ID D FKHIND GH+ GD++L A+ ++SC R+ D Sbjct: 399 QSRLDHALTAANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDT 458 Query: 328 VFRWGGEEFVLLLPR-TPLDTALS-LAETIRVSVAKVSISGL--PRFTVSIGVAHHEGNE 383 V R GG+EF ++L T ++ +A TI S + S+G+A + + Sbjct: 459 VARMGGDEFTIILADLTDTAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDS 518 Query: 384 -SIDELFKRVDDALYRAKNDGRNR 406 + L K D A+YRAK GRNR Sbjct: 519 GNAALLIKHADTAMYRAKESGRNR 542 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 65/225 (28%), Gaps = 23/225 (10%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 + R+E+ R + L V E L R ++ ++ ARF Sbjct: 15 ELMLRQEQIHTKWDRDNVNALIHDLNVHQIELEIQNQELRESQLRLEKAKQVQESALARF 74 Query: 135 -FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 L NSAP I G +++ N L G E + +K + + Sbjct: 75 EALFNSAPEGFILIDVSGMVLECNHTTLEMLGCKREDLIRKPFSAFVHIEDQPKFYASYP 134 Query: 194 SHLPGGH-KPLNFVH-------KLADGSTRHVQTYAGPIEIY-------GDKLMLCIVHD 238 S + KP+ K D S T ++ + +L +++ Sbjct: 135 SFFKSTYPKPIEIRLIHKGSAFKHKDHSFIAELTGCSTLKQDLFKDLYHDNPFILVSIYN 194 Query: 239 ITEQKRLEEQL--EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI 281 I K LE +L A L N + Sbjct: 195 INAHKLLERELADAKQAA-----ELANHALLESHDKLEATVAQRT 234 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 153/404 (37%), Gaps = 10/404 (2%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 L L PV + P +++ N A + + + + + + + + + Sbjct: 14 AQLSLFPLPVLVYDPVTLRVLEVNDVALRWFGHQRETMVGSQVIDMVANDYVDRMMGYIA 73 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 D T E + I +EG A + + + R Sbjct: 74 GLSD-----TDWSSGEWQLRRADGSCFEARSFSRGIEWEGRRARLAVVEDLTEPRRHMRA 128 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK-HTWEINMLGRR 185 + ++ T A ++ + +D + N ++GY+ + + K ++ + R Sbjct: 129 LEESEQQYRATMGAALVGVYVLQDFRFRYVNPELCRYFGYSADELVDKLGPLDLVVAEER 188 Query: 186 VMPIMHEISHLPGG-HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 G P DGS + P G + V D++E K Sbjct: 189 EYVREQLARRARGEPGHPFELTGLRRDGSHFPFMVFGAPSTWRGQPASVGTVFDLSEIKA 248 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 E+++ A+ D +TGL NR ++ + +L+ ID DRFK +ND GH Sbjct: 249 AEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTVNDSLGH 308 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 GD++L + L R D V R GG+EF++L P T + A+ LAE I A Sbjct: 309 LMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFAAPFD 368 Query: 365 SGLPRFTV--SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T+ SIG+A + + L + D A+Y+AK +GRN Sbjct: 369 LDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRN 412 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 11/328 (3%) Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLI 145 ++ L +L + E G + + R A ++ R ++S +++ Sbjct: 362 MADELQGHRLLQEERTAELAGANSALETEIAEHRDAEEALRQ---RQRAIDSSSNGIMIT 418 Query: 146 DP-SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH-EISHLPGGHKPL 203 D D I+ N A GY + ++ + R + + ++ Sbjct: 419 DALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELREGHA 478 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 + DGS P+ ++ + IV+DITE+KR EEQLE+ ++HD +TGL Sbjct: 479 ELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGL 538 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NR + ++ ID D FK IND GH GD++L AR L C Sbjct: 539 PNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSEC 598 Query: 322 ARKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETIRVSVAKVSISGLPR--FTVSIGVAH 378 R D V R GG+EFV++L + + A +A I+ +V + G + S G++ Sbjct: 599 VRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISL 658 Query: 379 HE-GNESIDELFKRVDDALYRAKNDGRN 405 + L K D A+YRAK GRN Sbjct: 659 YPKDGSDAQVLLKNADVAMYRAKQCGRN 686 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 6/129 (4%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQ--LIYANSAAKLLMQDLTFSQLRTGPY---SVSSQK 56 + +D ++ + I E +IY N A + + L P S ++ Sbjct: 401 LRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQ 460 Query: 57 ELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGL 115 + + + +++ + L + L V + GI T Sbjct: 461 LGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERK 520 Query: 116 KASRSANYQ 124 + YQ Sbjct: 521 RYEEQLEYQ 529 >UniRef50_D0J0D1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J0D1_COMTE Length = 458 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 98/393 (24%), Positives = 169/393 (43%), Gaps = 18/393 (4%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPKYLSDLQNQHDIIEILTVQRKEE 82 + Y N A + T L P + + +++ + L + + V +++ Sbjct: 47 IRYCNKAFTSMTGYATEELLGRSPRMLQGPETDQQVIEQLRQCLAEGRFFQGSAVNYRKD 106 Query: 83 ETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 T + + + F ++ T +++ R + NSA Sbjct: 107 GTPYHVSWNISAVRDVNGKITHFVSVQQDVTRQVESERQRDLM---------IQALNSAN 157 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGG 199 + R+G +V N A + GY + + + G E+ + G Sbjct: 158 APVFITDRNGYLVFVNHAFEHQTGYCAAEVMGRTPAMLQS-GSHTAQFYAELRDALVRGE 216 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDA 257 + F+++ DG H + ++ + I DI++ + E++L A+ D Sbjct: 217 NFSRTFINRRKDGELYHAAQSISALRDARHRITHYVSISKDISDLVQREQELLVRAYRDD 276 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TGL NR + E Q Y+L++ D D FK +ND +GH GD+VL +A+ Sbjct: 277 LTGLPNRSAGSYELENCQRIAERQGVPYALIMCDVDLFKQVNDQFGHEAGDQVLQQIAKV 336 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVA 377 L + R + V RWGGEEF++++P L AL LAE +R S+A S + T+S GV Sbjct: 337 LRNTVRSSEHVARWGGEEFLIIVPGVGLQAALELAERLRRSIASHSYAAAGTITMSFGVG 396 Query: 378 HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 + E+ +L +R D ALYRAK+ GRN+V A Sbjct: 397 SWQAGEASAQLLRRTDMALYRAKSSGRNQVRRA 429 >UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6G6_9RHOB Length = 1020 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 151/413 (36%), Gaps = 21/413 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + T + + ++ F+ +++ N + + + ++ + Sbjct: 333 RDLETFFNQSQSLNLIVDFKGRILRLNDSWEDFLGYELKEVAERPFIEFVHPEDRAMTEA 392 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 ++ + E +C + + L +++ Sbjct: 393 AFTA---LLVGDGIDGFENRYVCACGAAKY-------LRWSARSDVDRQLIYAVAQNITE 442 Query: 124 QRKKQGFYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 Q+K + + + +I +G IVD N A + GY + + + I Sbjct: 443 QKKAENALKLAANVFTHSDEGIIITDINGAIVDINEAFTDITGYERDEILGNNPS-ILSS 501 Query: 183 GRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 G+ + G +K DG + IE + + D Sbjct: 502 GKHDADFYQTMWSKLRKDGVWQGEIWNKRKDGDVFAERLTISAIEDESGNTTNYIGLFVD 561 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 IT+ K E QLEH A +D +TGL NR + + ++ ID D FK + Sbjct: 562 ITKMKAHERQLEHLARYDRLTGLPNRVLLADNMQQAMARARRHGHTLAIAFIDLDGFKAV 621 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRV 357 ND YGH+ GDE+L ++A L R D + R GG+EFV ++ + +S I Sbjct: 622 NDTYGHAAGDELLVSVAHRLTKVLRTEDTLARIGGDEFVAIITDLPDEKSCVSTLNRILD 681 Query: 358 SVAKVSISG--LPRFTVSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNR 406 + +K G + SIGV + E D+L ++ D A+Y AK GRN+ Sbjct: 682 AASKEFKLGAATASVSASIGVTFYPQTEEIDGDQLERQADQAMYEAKISGRNQ 734 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 7/179 (3%) Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 V R ++ + RL L KL E T + S +++ Q FF Sbjct: 283 VWRYFTLSSFNNRLRLSKLQLINLNETLETRVRNRT--RELSEEVEERKRSQRDLETFFN 340 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 + + L++ G+I+ N + +F GY + + ++ E R M + L Sbjct: 341 QSQSLNLIV--DFKGRILRLNDSWEDFLGYELKEVAERPFIEFVHPEDRAMTEAAFTALL 398 Query: 197 PG-GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 G G + A G+ ++++ A +L+ + +ITEQK+ E L+ AA+ Sbjct: 399 VGDGIDGFENRYVCACGAAKYLRWSARS--DVDRQLIYAVAQNITEQKKAENALKLAAN 455 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 340 bits (873), Expect = 6e-92, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 9/332 (2%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 A+ + + + + A R + + ++A Sbjct: 225 YQAMEGQAIRIQAISHGAFWLVGVAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALE 284 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGGH 200 + G+I+ N GY + + I EI G Sbjct: 285 ATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIRSNH-HDADFYAEIWQAIFRDGR 343 Query: 201 KPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAM 258 ++ DG + + + DITEQ + + AH+D + Sbjct: 344 WQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVL 403 Query: 259 TGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTL 318 T L NR F E + L + +LL +D D FK +ND GH GD++L +A L Sbjct: 404 TDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRL 463 Query: 319 ESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVSVAKVSISG--LPRFTVSIG 375 C R D + R GG+EF ++L A +A+ I S+ SIG Sbjct: 464 RGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAPIFIDGRDVFIGTSIG 523 Query: 376 VAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 ++ S DEL K D A+Y+AK G+ R Sbjct: 524 ISLFPIDGTSGDELLKHADTAMYQAKAAGKGR 555 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 340 bits (873), Expect = 6e-92, Method: Composition-based stats. Identities = 84/408 (20%), Positives = 152/408 (37%), Gaps = 20/408 (4%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD--LQNQHDIIE 73 +W P Q + N + ++ + G + L + Q Sbjct: 252 LWEAEPATGQWRFVNGDTQAILGISAQQIGQPGIREARVHADDLPRLRETYRQAGPTPSS 311 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 + R E + + R ++ ++++ + G+ + ++A + + Y Sbjct: 312 VDYRYRSNEASWVWLRDIVSSASDSDGHAVLRGLTLDVSPQ---RQAALALKDSESRYRE 368 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV--MPIMH 191 ++ G+ N A GY+ + E + + Sbjct: 369 VIE--HVSEVIFRTDHQGRWTLLNPAWEELTGYSIAESLGRPVSEFVSAEDSPLLEALTN 426 Query: 192 EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQL 249 ++ H G R V + + +++ + DITE+KR EE++ Sbjct: 427 QLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDAEGRVIATFGTLTDITERKRAEEEI 486 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 A +D++T L NR Y ++L +D D FK IND GH GDE Sbjct: 487 RRLAFYDSLTELPNRSLLYDRLRLAMASAARSRHHGAILFLDLDNFKDINDTLGHDVGDE 546 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE------TIRVSVAKVS 363 +L +A ++ R+ D + R GG+EFV++L + A + E + +A+ Sbjct: 547 LLRQVASRMQGTIRETDTLARLGGDEFVIILNDLHPEQAQAAVEAETLGSKLLHLLAEPF 606 Query: 364 ISGLP--RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRVL 408 G T SIG E ++DEL K+ D A+YRAK+ GRN + Sbjct: 607 RLGEHERHCTPSIGATLFGDGEVNVDELLKQADLAMYRAKDSGRNTLC 654 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 162/410 (39%), Gaps = 9/410 (2%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + L W + E ++ N+ ++ ++ S Sbjct: 333 QLLSVLSGSELGFWDWNI-EANTVHRNARWAEMLGYRFEDIQNDTSINLDSVHPNDCG-R 390 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 Q+ D +E T Q K E + + + + + ++ + + P + + Sbjct: 391 VWQSVTDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKR 450 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + ++ + ++ + +G I+ N A GY+ + + K I Sbjct: 451 KLAEESMQLASMVYQNSREAMTVTDSNGNIITTNPAFTEMTGYSADEITGKSHTFIVSKQ 510 Query: 184 RRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDIT 240 + E++ GH + +G I + + DIT Sbjct: 511 QDKRVYQRMELALNSTGHWRGEVSCRHKNGENYMALLGINSIYNEDRSVHRRVAQFSDIT 570 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 E+K+ E+ + A+ D +TGL NR+ F+ + + + LL +D DRFK +ND Sbjct: 571 ERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLHEKNKAQRRGLNVGLLFLDLDRFKAVND 630 Query: 301 LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSV 359 GH+ GD++L +A+ L +C RK DLV R+GG+EF +++ + +A+ I + Sbjct: 631 TLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSVERVAQKILCEL 690 Query: 360 AKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 A+ + G T SIG+ + E+ + L K D A+Y AK GRN Sbjct: 691 AEPFLLGEQNVYITPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRNC 740 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 5/142 (3%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L+ ++S + ++ + + F S + + P + + N GY E + Sbjct: 189 VQRLRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKG--WLRVNPRLCEILGYREEEL 246 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIE-IYG 228 + E+ R + + L G + + DG + +V Sbjct: 247 LLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGA 306 Query: 229 DKLMLCIVHDITEQKRLEEQLE 250 + ++ + D +E+K E+++ Sbjct: 307 VQFVIAGILDSSERKHAEDKIR 328 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 28/257 (10%), Positives = 77/257 (29%), Gaps = 17/257 (6%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGP----YSVSSQKELPK 60 + DL + + I P + + N ++ L + +L + Sbjct: 208 FRSQFDLGSIGIAITYPGKG-WLRVNPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQ 266 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 Y L + D + +++ ++ + + V ++ A Sbjct: 267 YDQMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQFVIAGILDSSERKHAEDK 326 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++++ + + + + D + + V N GY E + + ++ Sbjct: 327 IRGRKEQL-----LSVLSGSELGFWDWNIEANTVHRNARWAEMLGYRFEDIQNDTSINLD 381 Query: 181 MLGRRVMPIMHEI----SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK---LML 233 + + + + + + G + + A + D+ M Sbjct: 382 SVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNYGEDQQPLRMS 441 Query: 234 CIVHDITEQKRLEEQLE 250 DIT++K EE ++ Sbjct: 442 GTHTDITKRKLAEESMQ 458 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 103/404 (25%), Positives = 174/404 (43%), Gaps = 11/404 (2%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAK----LLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 L+ L +P ++++ E Q+I N AK ++ S S ++ Sbjct: 262 LEALPNPTYLIN-RERQIIALNQVAKERGAVVGDYCWHSIHHLKTISPVERQFFENTGKP 320 Query: 65 LQNQHDII-EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L ++++ L I K + Sbjct: 321 LPGTKCYFCRADEALNRKQKENCEVNLDGLFWNIWWVPIDENTYLHYVIDVTKYKKMEEE 380 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 R+++ F + A ++++D + +I + NL A G + E + K +EI Sbjct: 381 IREQKEFLRLILDSMPAGVMVVDA-KTFRIENVNLEAAAMIGASPEEIIGKSCFEIFP-- 437 Query: 184 RRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQK 243 + I+ + + DGS V + + ++ D+TE+K Sbjct: 438 --ESKGLCLITAVGQEMDWAERILHRMDGSQLPVLKIVKRLRTKSGEKLIETFIDLTERK 495 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 +LEEQL + D +T NRR F + E + ++L+++D D FK++ND +G Sbjct: 496 KLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFG 555 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVS 363 H+ GD VL LA +++ R+ D + RWGGEEFV+LLP TP++ A LAE +R ++ + Sbjct: 556 HAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLE 615 Query: 364 ISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 I G+ R T S GV + +++D L R D LY AK GRN V Sbjct: 616 IPGVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRNCV 659 Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 20/217 (9%) Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG-----FYARFFLTNSA 140 L+ + + V + + AT + + R + Y + + Sbjct: 82 LTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRLYEANVHANMYWQILEDSLN 141 Query: 141 PMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHEISHLPG 198 + + +P + N A GY E + ++ ++ + Sbjct: 142 EIYIFNP-ETLRFHVVNRGARKNLGYTLEELNTMTPLDLKPEFDLKSFRALLEPLLSGKE 200 Query: 199 GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRL-------EEQLEH 251 VH+ DGS V+ + + G+KL L +V D+TE+K L EEQL Sbjct: 201 EQIVFYTVHRRKDGSLYPVEVHLQLFDYRGEKLCLALVIDLTERKALEEENRRKEEQLRL 260 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + L N + + + +++ Sbjct: 261 M-----LEALPNPTYLINRERQIIALNQVAKERGAVV 292 Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 84/269 (31%), Gaps = 37/269 (13%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY--- 61 + L+ + ++I +P + N A+ + P + + +L + Sbjct: 132 YWQILEDSLNEIYIFNPETLRFHVVNRGARKNLGYTLEELNTMTPLDLKPEFDLKSFRAL 191 Query: 62 -LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L + + I TV R+++ + + L+ + A + Sbjct: 192 LEPLLSGKEEQIVFYTVHRRKDGSLYPVEVHLQLFDYRGEKLCL----ALVIDLTERKAL 247 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R+K+ P LI +R+ QI+ N A + + W Sbjct: 248 EEENRRKEEQLRLMLEALPNPTYLI--NRERQIIALNQVAKE-----RGAVVGDYCWHSI 300 Query: 181 MLGRRVMPIMHEISHLPGGHKPL---------NFVHKLA--------DGSTRHVQTYAGP 223 + + P+ + G P +++ DG + P Sbjct: 301 HHLKTISPVERQFFENTGKPLPGTKCYFCRADEALNRKQKENCEVNLDG-LFWNIWWV-P 358 Query: 224 IEIYGDKLMLCIVHDITEQKRLEEQLEHA 252 I + L V D+T+ K++EE++ Sbjct: 359 I---DENTYLHYVIDVTKYKKMEEEIREQ 384 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 148/413 (35%), Gaps = 22/413 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 + + +V + + + A + L+ D L + V + E ++L + Sbjct: 205 RAITQAIPD-LLLVLDEDGRYLEILCAERSLLYDEPSKLLGRRLHDVMPEAEERRFLGFI 263 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 Q + ++ L + + + A + L + Sbjct: 264 QQTLNSDSPQLIEYS-----LPTLGGPKVFEGRALPLEQPPGQKRAVVWLSRDITDRVNT 318 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + A + ML+ +I+ N A GY+ + T + GR Sbjct: 319 ELERRIAAIAFESQQGMLI--TDAQNRILRVNGAFSRISGYSAAEAIGQTTA-LLASGRH 375 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITE 241 + G ++ G + + + DIT+ Sbjct: 376 GPDFYRSMWSSIEATGVWEGEIWNRRKSGEIFPEWLTISAVRNVHGEVTHYVAAFTDITD 435 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 +K EE++ + A +D +TGL NRR Q +L+ ID D FK+INDL Sbjct: 436 RKAAEERIHNLAFYDPLTGLPNRRLLLDRLHQAMAVSRRSNQLGALMFIDLDNFKNINDL 495 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP------LDTALSLAETI 355 +GH GD+VL A L + R D+V R GG+EFV++L A + + Sbjct: 496 HGHQTGDQVLRVAAERLHAEVRASDMVARLGGDEFVVMLENLGDDPLRAAAQAEHIGMKL 555 Query: 356 RVSVAKVSISGLPRF--TVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 S+ + + SIGV G S DEL KR D ++Y AK G+N Sbjct: 556 LNSLDRSYRLNELGLYSSASIGVVLFGGEACSSDELMKRADMSMYEAKISGKN 608 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 10/160 (6%) Query: 101 VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA 160 + + L+ R R + T + P LL+ DG+ ++ L A Sbjct: 174 PLATATLGVLLNDLLERDRIEQALRFSEARLRAI--TQAIPDLLLVLDEDGRYLEI-LCA 230 Query: 161 LNFYGYN-HETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQ 218 Y+ + + ++ + L L + G + + Sbjct: 231 ERSLLYDEPSKLLGRRLHDVMPEAEERRFLGFIQQTLNSDSPQLIEYSLPTL-GGPKVFE 289 Query: 219 TYAGPIEI--YGDKLMLCIVHDITEQK--RLEEQLEHAAH 254 A P+E + ++ + DIT++ LE ++ A Sbjct: 290 GRALPLEQPPGQKRAVVWLSRDITDRVNTELERRIAAIAF 329 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 14/381 (3%) Query: 36 LMQDLTFSQLRTGPYSVSSQKELP--KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLR 93 ++ ++ R P S + +L + + K+ + RL + Sbjct: 418 ILGEIATRLERMEPDMRVSIQIGSDGPHLPAERTVPERPADWVAPFKDGAGQMLGRLFVH 477 Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 + P E A + R + S +I +G+I Sbjct: 478 YVEPRAPTP--TERELIDECACIAGLAVTRVRADTRLRQAATVFESTREGVIITDLEGRI 535 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLAD 211 +D N A GY+ + ++ + R+ + H GH ++ Sbjct: 536 LDVNRAFTEISGYSEPEVLGRNPS-LLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKS 594 Query: 212 GSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYH 269 G + + + ++ DI++ K+ E +LEH H+D +T L NRR Sbjct: 595 GELYPQILTINTVADSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQS 654 Query: 270 ITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVF 329 E + ++L +D DRFK +ND GH GD +L LAR L R+ D + Sbjct: 655 RLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLA 714 Query: 330 RWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPR---FTVSIGVAHHE-GNES 384 R GG+EF++LL + A ++AE++ + + + SIG++ + + Sbjct: 715 RLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHT 774 Query: 385 IDELFKRVDDALYRAKNDGRN 405 + +L + D A+Y+AK +GRN Sbjct: 775 VTDLIQHADVAMYQAKEEGRN 795 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 9/151 (5%) Query: 115 LKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSR---DGQIVDANLAALNFYGYNHETM 171 + R R A ++P++L + + + GY+ Sbjct: 261 TQLERERANLRAASERLA--LALATSPVILYSRRLGPDERPLTWISENIARLLGYSPTLA 318 Query: 172 CQKHTWEINMLGRRVMPIMHEISHL-PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 Q W + + + L GG + A G R +Q +E G Sbjct: 319 LQPGWWNSRLHPEDREAALDWLRELDRGGAMVHAYRLIDAQGRVRWIQDEVTLLETDGGT 378 Query: 231 LMLCIV--HDITEQKRLEEQLE-HAAHHDAM 258 HDIT K E+ E A DA+ Sbjct: 379 THEATGAWHDITATKTGEQMRETRLAVLDAL 409 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 84/347 (24%), Positives = 130/347 (37%), Gaps = 11/347 (3%) Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 H+ I + + V L E +G + + Sbjct: 392 TLHESIASRQPASLKHRLLMPDGRVKYVLESCETEYGRDGTPLRVIGTSQEVTAQQEMLA 451 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + A + ++ +I+ N A GY E + ++ GR + Sbjct: 452 QMQLLASAVQYS--GEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRDPSFLSA-GRTM 508 Query: 187 MPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQ 242 + + G + DG I + + D++ + Sbjct: 509 PEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVSSE 568 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 + EE+L H AHHD +TGLLNR + ++L +D DRFK IND Sbjct: 569 RAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTL 628 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETIRVSVAK 361 GH GDE+L +A L R D+V R GG+EFV++L +A++ +AE + SV + Sbjct: 629 GHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQ 688 Query: 362 VSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 G T SIG+A + E D L K D A+Y AK GRN Sbjct: 689 SYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRN 735 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 91/406 (22%), Positives = 156/406 (38%), Gaps = 29/406 (7%) Query: 22 FEEQLIYANSAAKLLMQDLTFSQLRTGPY-SVSSQKELPKY----LSDLQNQHDIIEILT 76 + L+ N A +++ + ++R P S+ + +++ ++ L + I+E Sbjct: 164 ADGTLLDMNRAGLQMIEAESIEEVRGKPITSLVAPQDVERFKAFNQRVLAGESGILEFQI 223 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL 136 + K L V P + +R ++ + Sbjct: 224 IGLKGGRRWLESHAVPFASRPGAPDAVLA-----------VTRDVTERKLAEEAVRLAAT 272 Query: 137 TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL 196 ++ G + N GY + + + ++ G I Sbjct: 273 AFETSEAIMITDAAGIVQRVNSGYSAITGYTSDEIVGTPSEFLHPGGEEGKTSPRAILEA 332 Query: 197 PGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHA 252 G + +G V + + DI+E+KR ++++E Sbjct: 333 LKGTDCWKGELTARRKNGDVCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQEIEQL 392 Query: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312 A+ D +TGL NRR F + SLL +D DRFKH+ND GH+ GD++L Sbjct: 393 AYFDPLTGLPNRRLFLERLNQAIGESCVNGSRCSLLFVDLDRFKHLNDARGHTVGDQLLR 452 Query: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAETIRVSVAKVSI-- 364 +A L +G +V R GG+EFV+LL + + +AE +RV + + + Sbjct: 453 KVAERLSEGVGRGGMVARLGGDEFVILLNGLDEEFESACRRTMDVAENLRVILQRPFVLS 512 Query: 365 SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLA 409 SG T SIG A + +S D+L K D A+Y AK GRN V A Sbjct: 513 SGQHYVTASIGTAIYPFDTDSADDLLKAADMAMYEAKASGRNTVRA 558 Score = 77.9 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 5/173 (2%) Query: 85 ALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL 144 A+S + + L + + +++ + L ++ P + Sbjct: 102 AVSFGTAILVWPLIPRALEIPSPRQLLELNQHLASEVSERKQAEQRLR--MLIDAEPECV 159 Query: 145 IDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL 203 DG ++D N A L + E + K + L G L Sbjct: 160 KTVGADGTLLDMNRAGLQMIEAESIEEVRGKPITSLVAPQDVERFKAFNQRVLAGESGIL 219 Query: 204 NFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLEEQLEHAAH 254 F G R ++++A P +L + D+TE+K EE + AA Sbjct: 220 EFQIIGLKGGRRWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLAAT 272 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 135/307 (43%), Gaps = 9/307 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + ++ + +P L++ G+I N G+ E + Sbjct: 139 RVRWTSAMVEAKSHIEMELRKLTSAVEHSPNLVLITDIAGRIEYVNRKFTAVTGWQPEEV 198 Query: 172 CQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD 229 K T + G ++ L GG F ++ DGS + P+ Sbjct: 199 IGKTTS-LFKSGLTPPSTYQDLWRTILDGGEWHGEFCNRRKDGSLYWEKCSIAPVRSPTG 257 Query: 230 --KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSL 287 + + D+TE KRL+E+L A D++TG+ NRR F ++ ++ Sbjct: 258 LLTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAV 317 Query: 288 LLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT 347 L++D D FK IND YGH+ GD L ALA T S R+ DL R GGEEF +L P L+ Sbjct: 318 LMLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNA 377 Query: 348 ALSLAETIRVSVAKVSISGLP---RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDG 403 A AE +R+++A I+ T S+G++ + E SID R D ALY AK G Sbjct: 378 ATEAAERLRLAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAG 437 Query: 404 RNRVLAA 410 RNR+ + Sbjct: 438 RNRLEIS 444 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 84/409 (20%), Positives = 157/409 (38%), Gaps = 14/409 (3%) Query: 7 NTLDLLTSPVWIVSPFEE-QLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 +D + ++ P ++ Y +S + G ++S Sbjct: 406 EVIDASPTILFRWQPNSSWKMEYVSSNVQRWG--YQADDFINGKLTMSDLLHPEDLQRVW 463 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 IE + E + + F+ P + + Sbjct: 464 AEVIHHIETRHKEYILECRVRTAAGEYLWVENHVTT-SFDRKGKPQRFTGVMTDITQQKN 522 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + + S ++ + I+ N A ++ +GY + + I G+ Sbjct: 523 NELQLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRPR-IFHSGKH 581 Query: 186 VMPIMHEISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 ++ H ++ +G + T P+ ++ + I DI++ Sbjct: 582 DGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQ 641 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 K E +LEH A HD +TGL NR + + + +LL++D D FK++ND Sbjct: 642 LKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDS 701 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVA 360 +GH GDE+L ++ L+ R+ D+V R GG+EF +LL D LAE I ++ Sbjct: 702 FGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALH 761 Query: 361 KVSISGLPR---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + R SIG++ + + +EL ++ D A+YRAK+DGR+ Sbjct: 762 QPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRD 810 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 49/152 (32%), Gaps = 7/152 (4%) Query: 116 KASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH 175 + ++ + + ++ F + I + +G + N + + + + + + Sbjct: 78 QHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLSTLFNLSRDELAELN 137 Query: 176 TWEINMLGRRVMPIMHEISHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGDKL-- 231 + R + G + DGS I + Sbjct: 138 LLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFALVDTRCIRHPDGSIDC 197 Query: 232 MLCIVHDITEQKRLEEQLEHAAH-HD--AMTG 260 M+ ++ DI+ +K E +L + +D ++T Sbjct: 198 MINVIEDISARKNSELRLIRQNNLYDMLSLTN 229 >UniRef50_Q2RU51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RU51_RHORT Length = 764 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 92/435 (21%), Positives = 161/435 (37%), Gaps = 36/435 (8%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLR---TGPYSVSSQKELPK 60 H D ++ ++V + +++ AN+AA ++ + + S + Sbjct: 38 HLAAITDTMSEGFYVVDGDD-RIVMANAAAGRILGYTQDDLIGACAHALFHARSADDPDP 96 Query: 61 -YLSDLQNQHDIIEILT--------VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAP- 110 L + + + E R + A+ T E + Sbjct: 97 VPLEECRLNRAVRERRAAFLDVGHFRHRSGKIIAVEVSCNPVADTLAEEGRRGGLLGWLL 156 Query: 111 ----------ATLGLKASRSANYQRKKQG-FYARFFLTNSAPMLLIDPSRDGQIVDANLA 159 A L + +R+ + + ++ DG+I AN A Sbjct: 157 DGDDAEGAPGALLSMVTFVDITARRESEAAVIKLSHAVEQSSASIVITDADGRIEYANPA 216 Query: 160 ALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP--GGHKPLNFVHKLADGSTRHV 217 GY + + I G + GG F ++ DG+ Sbjct: 217 FTKISGYTAQEAIGRRPS-ILKSGLVPAETYRALWQTITNGGEWRGEFHNRRKDGTLYWE 275 Query: 218 QTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQ 275 PI K+ + + D+TE+K +E +L H A++DA+TGL NR+ Sbjct: 276 MASISPIRDARGKITNFVAVKDDVTERKAIESELYHRANYDALTGLPNRQLLLDRVSTAL 335 Query: 276 MQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEE 335 + +++ +D DRFK IND GH+ GD +L A L + R D + R GG+E Sbjct: 336 DLARRHDRRVAVMFMDIDRFKQINDSMGHAAGDVLLKQAASRLAAVLRPQDTLGRLGGDE 395 Query: 336 FVLLLPRTPLD-TALSLAETIRVSVAKVSISGLPR---FTVSIGVAHHE-GNESIDELFK 390 F+++ P + A +LA + VA+ + R +VSIGV+ + L + Sbjct: 396 FLVVAPGLRWESEATALASRLLE-VARRPFTIDGREVYVSVSIGVSLGPVDGTTAQALMR 454 Query: 391 RVDDALYRAKNDGRN 405 D A+Y AK GR+ Sbjct: 455 NADAAMYLAKGGGRD 469 Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 43/175 (24%), Gaps = 33/175 (18%) Query: 113 LGLKASRSANYQRKKQGFYARFFL-TNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 L L R+ T++ D +IV AN AA GY + + Sbjct: 18 LLLALVHGRRVGRRADRQCRHLAAITDTMSEGFYVVDGDDRIVMANAAAGRILGYTQDDL 77 Query: 172 CQKHTWEINM--LGRRVMPIMHEISHLPGGHKPLNF------VHKLADGSTRHVQTYAGP 223 + P+ E L + + G V+ P Sbjct: 78 IGACAHALFHARSADDPDPVPLEECRLNRAVRERRAAFLDVGHFRHRSGKIIAVEVSCNP 137 Query: 224 IEI---YGDK---------------------LMLCIVHDITEQKRLEEQLEHAAH 254 + + L + DIT ++ E + +H Sbjct: 138 VADTLAEEGRRGGLLGWLLDGDDAEGAPGALLSMVTFVDITARRESEAAVIKLSH 192 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 95/414 (22%), Positives = 152/414 (36%), Gaps = 31/414 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 +D +W +++ + +A L++ R + + + Sbjct: 473 AVDGSGDGLWDWDLITDKISF-GAAYARLLRYPGNDLARD--FRFRERLHPDDRDRSIAA 529 Query: 68 QHDIIEILT--------VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + IE T E R + F G+ T L+ Sbjct: 530 VRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMC-HRDAHGTPQRFSGVLTDLTDRLQ--- 585 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 ++ A+ F + +++ D R +IV N A GY + + + Sbjct: 586 ----AEERLRLAAQVFDSTQEGVMITDARR--RIVSVNRAFTTLLGYTETEVLGQTPRML 639 Query: 180 NMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCI 235 GR + G ++ DGS + + + + Sbjct: 640 -SSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQVTHYVGV 698 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 DIT K E +LE AHHD +T L NR F + + Q + ++LL+D DRF Sbjct: 699 FTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDLDRF 758 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAET 354 K IND YGH GDE+L +A+ L R+ D + R GG+EF LL+ D A LA Sbjct: 759 KDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARLASE 818 Query: 355 IRVSVAKVSISGLP---RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGR 404 + +++ S VSIG+ + + L + D ALYRAK DGR Sbjct: 819 LLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGR 872 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 14/245 (5%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQ 78 ++ + +L N ++ R ++ +L DL D++ + Sbjct: 75 LTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAA---DLDKVADLLAGRIDR 131 Query: 79 RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ-----GFYAR 133 + E+ L +T V + G + + + ++ + Sbjct: 132 YRMEKRYLRPDSSTIWVT--LTVSLARGADGQPRQFISVVQDITAVKQAEGDLLRQRRQL 189 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR-VMPIMHE 192 + S P + DG+ + AN AA G + +C + +I Sbjct: 190 QQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQARRADR 249 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLE 250 ++ G + ADGS V P+ + ++ + D++ ++R +L Sbjct: 250 LALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVS-RERHNLRLL 308 Query: 251 HAAHH 255 AH Sbjct: 309 EQAHR 313 Score = 74.4 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 8/177 (4%) Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK---ASRSANYQRKKQGFY-AR 133 + T + + +P F I+ L R+A Q + + + Sbjct: 3 RAAGGATLILLLGTAWLVAGPQPASWFTAIQTLLCASLAGWLIRRAARAQEQAEQAHKRV 62 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + A + + + DG++ + N G E + +I + Sbjct: 63 ADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVA 122 Query: 194 SHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLE 246 L G + + D ST V + + +V DIT K+ E Sbjct: 123 DLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAE 179 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 77/270 (28%), Gaps = 43/270 (15%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQ 78 V + + + AN AA+ L+ + + E + ++ + + V+ Sbjct: 202 VRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQARRA--DRLALSQNGLVR 259 Query: 79 RKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFL-- 136 R+ TA + L + + I ++G SR + R + + R Sbjct: 260 REASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRLLEQAHRRNHELL 319 Query: 137 ----------------------------------TNSAPMLLIDPSRDGQIVDANLAALN 162 + P L+ DG IVD + + Sbjct: 320 AEAERSRLALLSLLEDQQLGQQALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQD 379 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP-LNFVHKLADGSTRHVQTYA 221 E + + ++ + H L + L DG + Sbjct: 380 KLLMPREQVIGRAIADLLPPSLTATALHHIARVLAEDAAQIFEYTLPLPDGE----HGFE 435 Query: 222 GPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + G + +L I DIT ++ L+ Sbjct: 436 MRMARAGSREVLAIARDITAERDARAALQR 465 >UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1C1_9PROT Length = 581 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 10/309 (3%) Query: 109 APATLGLKASRSANYQRKKQGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN 167 A G+ + A QRK A ++ + ++ D I D N A GY Sbjct: 273 LLAVAGMALAILATAQRKAMHQIALNAKVSEVSNDGIVIVDEDNYIQDINPAFTTLTGYT 332 Query: 168 HETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIE 225 E ++ ++ G++ ++ L GH ++ DG + ++ Sbjct: 333 REDAIGRNPRFLSA-GKQSHEFYADMWKSLLEVGHWEGEIWNRRKDGEIYLEKLSIYTLK 391 Query: 226 IYGDKLM--LCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 K++ + + DIT+ + +E + H A HD +TGL NR F ++ Sbjct: 392 DAQGKVVNRVGVFSDITQSRVEQETVAHHAQHDFLTGLPNRLLFRDRFNQQLALAKRYSK 451 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR- 342 ++++ ID DRFK +ND GH GD +L A+A L+S R+ D V R+GG+EF +L+ Sbjct: 452 KFAVMYIDLDRFKPVNDTLGHQVGDLLLMAVADRLKSQVREIDTVSRFGGDEFAILVSEV 511 Query: 343 TPLDTALSLAETIRVSVAKVSIS--GLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRA 399 +LAE I ++ + + S+G+A + ++ + D A+Y+A Sbjct: 512 VTQRDVTALAEKILAALKAPFVLENHTVNISGSLGIAIYPDDGMDMETILSNADTAMYKA 571 Query: 400 KNDGRNRVL 408 K+ G N Sbjct: 572 KHKGANTYC 580 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 27/414 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPK 60 N ++ + ++I + + N AA L + + + + + SQ+ L + Sbjct: 318 RYRNLMNAVADGIFI-HNLQGAFLEVNEAACLSLNYSREELINSYVWDIEVGFSQESLNQ 376 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 ++Q E + ++ + RL + T + V+ R Sbjct: 377 LWENVQKGPINTEGMHRRKDGTTFPVDVRLAVFNATGEKLVLAIV-------------RD 423 Query: 121 ANYQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 Q++ + + +P+L+I + G I N + GY E + +T + Sbjct: 424 ITLQKRSEATIRKLTRALEQSPVLVIITDKTGTIEYVNAKVIEQTGYRKEELVGGNTRIL 483 Query: 180 NMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 G+ I + G ++K G V PI +++ L + Sbjct: 484 RS-GQTPHEIYKTMWEHLANGEEWHGELLNKNKSGEHFWVSAIISPIRNDNEEITHYLAV 542 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 + D+T++K EE L+H A D +T L NR + E + Q ++L +D D F Sbjct: 543 MEDVTQKKSYEEMLKHQATFDNLTNLPNRLYAVNKLERAISKSHINNQKLAVLFLDLDEF 602 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAET 354 K IND GH+ GD +L AL+ S R+ D + R GG+EF+++L D A S+A+ Sbjct: 603 KQINDSLGHAIGDLLLKALSERFLSMIRQTDTIARLGGDEFMMILENIMQDKDAESIAKK 662 Query: 355 IRVSVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 R ++ + S + SIG+A + + L + D A+Y++K G+N Sbjct: 663 CREICSQPFVIESQELLVSTSIGIAIYPEHGKDAKTLMRNADTAMYQSKIRGKN 716 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 14/241 (5%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV--SSQKELPKY--LSDLQNQHDIIEI 74 ++ E + Y N A + + + S+ S ++ + ++ + + Sbjct: 204 ITNEEAVIQYVNPAFENITLYNAREAMNKTVASLLRSPVEDAQLFEEINQTLKSGNTWKG 263 Query: 75 LTVQRKEEETALSCRLVLRKL--TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 RK++ + + ++ + E + I+ T + N + + Y Sbjct: 264 QIRSRKKDGSYWVAQTIIVPVMDDELGRITQHIAIKQDITEQVHR---FNQLKISEERYR 320 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 N+ + + G ++ N AA Y+ E + + W+I + +++ Sbjct: 321 NLM--NAVADGIFIHNLQGAFLEVNEAACLSLNYSREELINSYVWDIEVGF--SQESLNQ 376 Query: 193 ISH-LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 + + G +H+ DG+T V G+KL+L IV DIT QKR E + Sbjct: 377 LWENVQKGPINTEGMHRRKDGTTFPVDVRLAVFNATGEKLVLAIVRDITLQKRSEATIRK 436 Query: 252 A 252 Sbjct: 437 L 437 Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 14/140 (10%) Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 +K++ A + + + I N A N YN K + Sbjct: 185 KKREKLLTTILEK--AGDSVEITNEEAVIQYVNPAFENITLYNAREAMNKTVASLLRSPV 242 Query: 185 RVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG-DKLM--LCIVHDI 239 + EI + G + DGS QT P+ ++ + I DI Sbjct: 243 EDAQLFEEINQTLKSGNTWKGQIRSRKKDGSYWVAQTIIVPVMDDELGRITQHIAIKQDI 302 Query: 240 TEQ-------KRLEEQLEHA 252 TEQ K EE+ + Sbjct: 303 TEQVHRFNQLKISEERYRNL 322 >UniRef50_Q2W736 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W736_MAGSA Length = 459 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 168/411 (40%), Gaps = 22/411 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS-- 63 L+L+++ V I+ + ++++ N A ++ + + + + + + Sbjct: 37 RELLELVSALVCIL--RQGEVVFINQAGVKVLGLASQADALGMAFVEFVESDYRFLVDAG 94 Query: 64 -DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 +L + + + + ++R R+ + E E A K +SA Sbjct: 95 WELLAEEEFLPLKLMRRDGSLFEAEIRVRVIPGPE-------EQFLLEARDISKFVKSAE 147 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 R+++ S +I G I AN AA +G+ + +H + Sbjct: 148 ALREREERLQGVL--ASVAEGIITVDERGLIESANPAAERMFGHGKGKLVGQHIGVLMGP 205 Query: 183 GRRVMPIMHEISHLPGG----HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +R +L G + + + ADG ++ + +L I+ D Sbjct: 206 EQREHHQEMFGQYLSGSAKLMGRSVESMGYRADGGRFPMEISVSELRYGKGRLFTGILRD 265 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 I+E+K EE+++ AHHD +TGL NR + ++L +D D+FK I Sbjct: 266 ISERKENEERIKRLAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLDKFKPI 325 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRV 357 ND GH GD VL +AR L++C R D V R GG+EFV+++ A +A I Sbjct: 326 NDTLGHEAGDAVLKEVARRLDNCVRSSDTVSRVGGDEFVVVVEEIGRPGEAAMVARKIIE 385 Query: 358 SVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ SIG+A +++E+ K D A+YR KN GRN Sbjct: 386 ALGTPVPYEDHSCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVKNSGRN 436 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 82/410 (20%), Positives = 145/410 (35%), Gaps = 17/410 (4%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 LD + ++ + + N A + L V + L Sbjct: 12 FQAILDRCPVGIAVID-YSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGSVLER 70 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 H + E T L + G +A + + Sbjct: 71 ----HQRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVLDISERKKT 126 Query: 125 RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR 184 ++Q A + + + D I+ N A GY+ + + K+ R Sbjct: 127 HEQQQIAAAVYDASHE--AIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFKSS-R 183 Query: 185 RVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDIT 240 E+ H G + +G + I ++ + + DIT Sbjct: 184 HPPSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFSDIT 243 Query: 241 EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND 300 +K+ EE + A++DA+T L NR F E +L+LID D FK +ND Sbjct: 244 LRKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLDHFKAVND 303 Query: 301 LYGHSKGDEVLCALARTLESCARKGDL-VFRWGGEEFVLLLPRT-PLDTALSLAETIRVS 358 GH GD +L +++ L + D + R GG+EF +++ +LA+ + + Sbjct: 304 SMGHRAGDMLLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDALAKALLEN 363 Query: 359 VAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ + SIG+A +++++ LFK D A+Y AKN GRN Sbjct: 364 LSHPFNIDGENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRN 413 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 140/371 (37%), Gaps = 17/371 (4%) Query: 48 GPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGI 107 Y S S N ++ V+ LS VL + ++ I Sbjct: 283 SIYPASITPSKRVAYSADFNATQNLDWKVVRHIPRAQLLSRTKVLGERLIPVSTLLLGLI 342 Query: 108 EAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN 167 + + A A F + + +I G I+ N GY Sbjct: 343 FFSSLKHARTHVRAQLAETDLRIAATAFESEES---MIITDSRGIILKVNQVFTATTGYT 399 Query: 168 HETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIE 225 E K + R HE+ G K +G ++ Sbjct: 400 SEEAVGKTPSLLKT-DRHSAEFYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVK 458 Query: 226 IYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQ 283 + D+TE+K EE++ A +D +TGL NRR L + Sbjct: 459 SKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGK 518 Query: 284 DYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT 343 + +LL ID D+FK +ND GH GD +L +A L++C R+ D V R GG+EFV++L Sbjct: 519 NGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDL 578 Query: 344 PLDTALSLA------ETIRVSVAKVS--ISGLPRFTVSIGVAHH-EGNESIDELFKRVDD 394 +++ + A E I ++ ++ +VSIG++ +S DE K+ D Sbjct: 579 NIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADI 638 Query: 395 ALYRAKNDGRN 405 A+Y+AK GRN Sbjct: 639 AMYQAKKSGRN 649 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 12/326 (3%) Query: 88 CRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDP 147 R + L+ + ++ L + +++ Y + F + + Sbjct: 360 ARGEMGSLSMHFNRYMDRLVDFRDELRAEIDERTRAEQR-LRLYEKVFENALEGISI--T 416 Query: 148 SRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNF 205 + G +V N A G+ E + K+ + E+ G Sbjct: 417 DKSGVMVAVNPAFTTITGFTSEEVIGKNPRVLKS-DMHGEEFYGEMWTTLKARGSWHGEI 475 Query: 206 VHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLN 263 ++ +G + I ++ + + HDI++ K EEQL H +HD +TGL N Sbjct: 476 WNRRKNGESYPEILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPN 535 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCAR 323 R ++L +D D FK IND +GH++GD +L A+A L + R Sbjct: 536 RVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYR 595 Query: 324 KGDLVFRWGGEEFVLLLPRTPLD-TALSLAETIRVSVAKVSI--SGLPRFTVSIGVAHHE 380 D V R GG+EF++++ + + LAE ++ + + T SIGV + Sbjct: 596 DEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYP 655 Query: 381 -GNESIDELFKRVDDALYRAKNDGRN 405 + L K D A+Y++K GRN Sbjct: 656 DDGQDPASLVKNADMAMYQSKAKGRN 681 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 124/340 (36%), Gaps = 9/340 (2%) Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 ++ R + + + + A+ Sbjct: 334 FYHHNSLLGIIGIANRDKPYDKSLINYLNPLLSTCGSILDAYHNDQRRKNAESRLRLTAK 393 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F + +++ D +VD N A + G + +H + + + Sbjct: 394 VFESTVEGVIITDTKA--YVVDVNEAFTHITGIARSEIMGRHLSTLQTKQEKPISFQRVR 451 Query: 194 SHL-PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLE 250 + G + +G + A + +++ + I DIT +K+ E++L Sbjct: 452 HAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLY 511 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 + AHHDA+TGL NR F E ++L ID DRFK IND GH GD + Sbjct: 512 YLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDIL 571 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSI--SGL 367 L +A + R D + R GG+EF +++ T + + I + K Sbjct: 572 LKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNE 631 Query: 368 PRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + SIGV+ + L +R D A+Y+AK G++ Sbjct: 632 LFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSC 671 >UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8B2_KANKD Length = 427 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 164/399 (41%), Gaps = 18/399 (4%) Query: 25 QLIYANSAAKLLMQDLTFSQLR--TGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRK-- 80 + +Y + + L + +S+ + + +++ + + + Sbjct: 33 RFLYISDGIEQLCGVTAQQAMADIESIFSLIHTSDFDRVITESLTTAQHGVVWHGEFRMC 92 Query: 81 -EEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNS 139 ++ + R + II+ G T ++ + + + F T + Sbjct: 93 LKDGRTIWVAAYDRPQVFDDGSIIWTGYVIDNTEHKDLHKALE---ESEAKFRAFVETAN 149 Query: 140 APMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR--RVMPIMHEISHLP 197 ++ S DG + + G+ + +H R + ++ Sbjct: 150 --DIIYSVSADGCFTYVSPNWTDKLGHETSEVLGQHFAHFVHPDDVDRCTQFLVQLYEEG 207 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAAHH 255 L + + + T A PI K+ + I DITE+K +E+Q+EH AH+ Sbjct: 208 TKKSGLEYRVRHKNNYWCWHTTNASPILDKDGKVTSTVGIARDITERKFIEQQVEHQAHY 267 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALA 315 D +T L NR F E + +LL +D D+FK +ND YGH+ GD +L +A Sbjct: 268 DTLTDLPNRSLFSDRLEQAIRLAHRQHEQLALLFLDLDKFKPVNDNYGHAIGDILLQQVA 327 Query: 316 RTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISG--LPRFTV 372 + ++ C R+ D V R GG+EF++LLP +D+A +AE + +++ + Sbjct: 328 QRMKDCLRESDTVGRIGGDEFLVLLPHVESVDSATHIAEKLLQAISSPFRINRIDIEISC 387 Query: 373 SIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRVLAA 410 SIG+A + ++ EL + D A+Y+AKN N V A Sbjct: 388 SIGIALYPTHGNTVLELIQVADQAMYKAKNQKGNLVFVA 426 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 155/405 (38%), Gaps = 23/405 (5%) Query: 14 SPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIE 73 + + E + Y N A+ L+Q L + + + + ++E Sbjct: 387 TDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFDREY--HRALME 444 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 TV +E L ++ T ++ ++ + Sbjct: 445 NRTVTFEEFYVPLD---EWFEVHAYPSEEGLTVYFRDITERKESEQARQEAHV--RIRQQ 499 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE- 192 L + A +I D I N A YG+ E + + + V Sbjct: 500 ASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEMLY---DNVAVFDEAN 556 Query: 193 ISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLE 250 + L G + D S +V+ + + + + I DIT++K E ++ Sbjct: 557 RALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQRKSAENEIL 616 Query: 251 HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEV 310 H A +D++TGL NRR + +LL ID D FK +ND GH GD + Sbjct: 617 HLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLL 676 Query: 311 LCALARTLESCARKGDLVFRWGGEEFVLLL---PRTPLDTAL----SLAETIRVSVAKVS 363 L +A L SC R+ D V R GG+EFV++L D AL ++ E IR + + Sbjct: 677 LRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPF 736 Query: 364 ISGL--PRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRN 405 T SIG+A +++ +EL KR D A+Y+AK GRN Sbjct: 737 NLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRN 781 Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 45/169 (26%), Gaps = 15/169 (8%) Query: 93 RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ 152 L+ + G L + A + + S R+ + Sbjct: 339 FVLSGNKEKAAALGHVNKKLLLAMEEQQATTRELSNAKLRTERILESITDAFYTLDREWR 398 Query: 153 IVDANLAALNFYGYNHETMCQKHTW-EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD 211 N A N N E + + W E + + + + D Sbjct: 399 FTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFDREYHRALMENRTVTFEEFYVPLD 458 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEE-------QLEHAA 253 + +A P ++ + DITE+K E+ ++ A Sbjct: 459 E---WFEVHAYP----SEEGLTVYFRDITERKESEQARQEAHVRIRQQA 500 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 85/389 (21%), Positives = 144/389 (37%), Gaps = 13/389 (3%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETA 85 ++Y + + + S +++ S + E + ++ T K Sbjct: 299 MLYLSDRCEEIFGYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTP-YKVLYKL 357 Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLI 145 R + E + + T+ + + S + Sbjct: 358 KHSSGESRWMEEQGRGVSTDSTG--LTIEGYIEDVTERIEAENRLNQAAAVFRSTGEGVA 415 Query: 146 DPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG--GHKPL 203 ++G IVD N A G++ + + K+T + G+ + + GH Sbjct: 416 ITDQNGTIVDVNEAFTKITGFDRDEVIGKNTRILQS-GKHDIAFYENMWEQIQKHGHWRG 474 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDK---LMLCIVHDITEQKRLEEQLEHAAHHDAMTG 260 ++ G+ I+ + + + DIT K E +L+H AH+DA+T Sbjct: 475 EVWNRAKSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTE 534 Query: 261 LLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLES 320 L NR F + ++L +D DRFK+IND GH GD +L +A L Sbjct: 535 LPNRLLFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRH 594 Query: 321 CARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI--SGLPRFTVSIGVA 377 R GD V R G+EF L+L + + + E I ++ S + + + SIGVA Sbjct: 595 VVRMGDTVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVA 654 Query: 378 HHEGN-ESIDELFKRVDDALYRAKNDGRN 405 N D L D A+Y AK GRN Sbjct: 655 ISPDNSNDADALLSFSDSAMYEAKEAGRN 683 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 77/259 (29%), Gaps = 13/259 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 ++ + P ++I+ N + L + + + + + + P +S Sbjct: 150 RYRGVVEDFPIMICTYKPG-GEIIFVNQSYCKLFGRTSEDLVGSNFLDLIPEGDRPALIS 208 Query: 64 D---LQNQHDIIEILTVQRKEEETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASR 119 + L + R R + + ++ I T + R Sbjct: 209 NISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEIESYQSIGEDITQRMIQER 268 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQK---HT 176 + + + +R+ ++ + +GY E++ + Sbjct: 269 ALE---SSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCEEIFGYTAESLIKSRYCSY 325 Query: 177 WEINMLGRRVMPIMHEISHLPGGHK-PLNFVHKLADGSTRHVQTYAGPI-EIYGDKLMLC 234 ++ G R + L + + K + G +R ++ + + Sbjct: 326 AQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWMEEQGRGVSTDSTGLTIEG 385 Query: 235 IVHDITEQKRLEEQLEHAA 253 + D+TE+ E +L AA Sbjct: 386 YIEDVTERIEAENRLNQAA 404 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 77/254 (30%), Gaps = 17/254 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELP-------K 60 D + I+ P + ++I N A + + +S + LP K Sbjct: 24 VFDHQFQFMAILEP-DGRVISVNQVALSQQGYTREDFVGRYFWESASWRHLPDWEAIWKK 82 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L I V + + V L +++ + G A + + Sbjct: 83 RLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFDSDGKL--NGYLIQAIDKTDKAIA 140 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R+ + Y P+++ G+I+ N + +G E + + ++ Sbjct: 141 EKALRESEQRYRGVVE--DFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVGSNFLDLI 198 Query: 181 MLGRRVMPIMHEISHLPGGHKPL--NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 G R ++ IS L L + + I ++ I Sbjct: 199 PEGDRP-ALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEIESYQSIG 257 Query: 237 HDITEQKRLEEQLE 250 DIT++ E LE Sbjct: 258 EDITQRMIQERALE 271 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 9/148 (6%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 S+ + + F M +++P G+++ N AL+ GY E Sbjct: 1 MAQMTNDSKFLEKLKNSSDLFEIVFDHQFQFMAILEPD--GRVISVNQVALSQQGYTRED 58 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKP-----LNFVHKLADGSTRHVQTYAGPIE 225 ++ WE L ++ + V++ DGS RH + Sbjct: 59 FVGRYFWESASWRHLPDWEAIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALF 118 Query: 226 IYGDKL--MLCIVHDITEQKRLEEQLEH 251 KL L D T++ E+ L Sbjct: 119 DSDGKLNGYLIQAIDKTDKAIAEKALRE 146 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 84/417 (20%), Positives = 153/417 (36%), Gaps = 23/417 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFS---QLRTGPYSVSSQKELPK 60 + ++ + +++ AN A +++ Q+E+ Sbjct: 567 RFRTLFASAALGMALIDAKQ-RVVDANPALMQMLELSHHRDALPPLAQLAHPQDQQEVAA 625 Query: 61 YLSDL---QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 L + ++ + E+ + T + ++ + E+ + I T Sbjct: 626 RLDAVIEGRSPQENCEVRCLCEARHLTIWTRMVISPIVLESNLTPMVVVIVEDVTQR--- 682 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 +R ++ + S ++ + +G++ N A GY + Sbjct: 683 ------RRSEEALRLAATVYESTNESVVIFNGEGRVEQVNQAFCRLSGYTAREVRGLELR 736 Query: 178 EINMLGRRVMPIMHEISHLP-GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLC 234 + L GH + + G+ + + + + Sbjct: 737 HLLSARYEKSQFDEMAQALALTGHWSGEVMGQRKQGALASERLSLSLVRRPDGSTQNTIA 796 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 + D+TEQK EE + A+ D +T L NRR F Q A +L +D DR Sbjct: 797 VFTDLTEQKAQEELIWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALFFLDLDR 856 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAE 353 FK IND GH GDE+L A + + R D V R GG+EF ++LP +AE Sbjct: 857 FKPINDTMGHQAGDELLQKCAERINAAVRSSDTVARLGGDEFTVILPNIQNGQDLSRIAE 916 Query: 354 TIRVSVAKVSIS--GLPRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRV 407 I ++ + G + S+GVA + + + + L + D ALY+AK+ GRN V Sbjct: 917 GIIKTLTEPFYLKAGEANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGRNNV 973 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 76/264 (28%), Gaps = 30/264 (11%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLT---FSQLRTGPYSVSSQKEL 58 + + I+ P Q+ N A+ + + + + + Sbjct: 450 VAKTRAVFQTAGDAILIIDPHSGQITAHNPMAEAVFGRSSAAFAHLTLSDLVVGVTPQ-- 507 Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 H+ E R + L + + + G Sbjct: 508 ----RFWLGLHEEGEG----RLPDGHTFPLELAITR-ASHGDGEMLIGTFRDIR---ARK 555 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYN--HETMCQKHT 176 ++ + + + F + + M LI ++VDAN A + + + + Sbjct: 556 QAELAIKASEARFRTLFASAALGMALI--DAKQRVVDANPALMQMLELSHHRDAL---PP 610 Query: 177 WEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS----TRHVQTYAGPIEIYGD--K 230 + + + + G P T + PI + + Sbjct: 611 LAQLAHPQDQQEVAARLDAVIEGRSPQENCEVRCLCEARHLTIWTRMVISPIVLESNLTP 670 Query: 231 LMLCIVHDITEQKRLEEQLEHAAH 254 +++ IV D+T+++R EE L AA Sbjct: 671 MVVVIVEDVTQRRRSEEALRLAAT 694 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 11/163 (6%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT-NSAPMLLIDPS 148 VLR E + + ++ + +GL A R + + A+ +A ++ Sbjct: 409 GVLRAQAEGGDLSLRAEVDPFSEVGLIADRYNHVMDAMEAAVAKTRAVFQTAGDAILIID 468 Query: 149 RD-GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVH 207 GQI N A +G + ++ + + Sbjct: 469 PHSGQITAHNPMAEAVFGRSSAAFAHLTLSDLVVGVTPQRFWL---------GLHEEGEG 519 Query: 208 KLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 +L DG T ++ ++++ DI +K+ E ++ Sbjct: 520 RLPDGHTFPLELAITRASHGDGEMLIGTFRDIRARKQAELAIK 562 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 84/405 (20%), Positives = 160/405 (39%), Gaps = 9/405 (2%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 LD +W + + +N + ++ + L P +++ Sbjct: 361 VLDSSDLGIWDWHINTNE-VASNLRSAQIIG-CELALLNQKPSLWFKAIIAEDRKRLIKS 418 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 I + ++ K E S +R + +T V+ P + + + +R + Sbjct: 419 LLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEVADTGQPLRMCGTHTDITDLKRAE 478 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + + ++ + G+IV+ N A G++ + + +H + + Sbjct: 479 ESLSIAASVYRNSSEAMCVFDYQGKIVNTNPAFSEITGFDADEVIGQHLAVLQKEEQAEH 538 Query: 188 PIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKR 244 + E + + +G T I D L + + D++E+K+ Sbjct: 539 FNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGELDTCDTLNVMLFADVSEKKQ 598 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 EE + A++D +TGL NRR + Q ++LL +D D FK +ND GH Sbjct: 599 AEELIWLQANYDTLTGLPNRRMLLEYIKLQIANCTRDNQGFALLFLDLDFFKEVNDSLGH 658 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVS 363 GD +L ++ +++C R DLV R GG+EF ++L T + I +++ Sbjct: 659 DMGDSLLVEASQRIKACIRDADLVARIGGDEFTIVLTDFTGPKGVERVTNKILKQLSEPF 718 Query: 364 ISGLP--RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 + G + SIG+ + + +ID L K D A+Y AK GRN Sbjct: 719 MLGSEMAYISGSIGITLYPDDALTIDGLLKNADQAMYSAKAHGRN 763 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 5/137 (3%) Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R+ + ++ + F + + + ++ + N Y+ + + + Sbjct: 219 ERNMQIRLQEDFLFKNQFDIGNIGIAITSKAK--YWLKVNPCICKMLKYSEKELTRMTWK 276 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQTYAG-PIEIYGDKLMLC 234 E+ + + L G + DG+ + G L++ Sbjct: 277 ELTHPEDLEKDLSYFNRMLKGEISEYEIDKRFIAKDGAIVYTHLTVACRFYDNGSMLVIA 336 Query: 235 IVHDITEQKRLEEQLEH 251 DIT+ K+ E L++ Sbjct: 337 GFLDITKLKQAEAALQN 353 >UniRef50_C5V4E8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4E8_9PROT Length = 1302 Score = 337 bits (864), Expect = 7e-91, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 160/415 (38%), Gaps = 30/415 (7%) Query: 21 PFEEQLIYANSAAKLLMQDLTFSQLR----TGPYSVSSQKELPKYLSDLQNQHDIIEILT 76 + N + ++ ++ S ++ + + Sbjct: 884 DTNGHCTFVNPSFLRILGYEHAEEVIGAHIHELIHHSHADGTIYPAAECKMYMAYQKNEK 943 Query: 77 VQRKEEETALSCRLVLRKLTETEPVIIFEGIE----APATLGLKASRSANYQRKKQGFYA 132 +E + I+ +G+ A + + + + Sbjct: 944 AHSVDEVFWRR-DGSAIPVEYWAQPIVIDGVITGVIATFIDISERKLAEAQLVESESRLR 1002 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKHTWEINMLGRRVMPIMH 191 + P + G++ N A L + + + E+ R Sbjct: 1003 AIIE--NEPECIKIVDAQGKLTQMNPAGLKMIEADSLAQIAGHNILELIAPEYRQEFSRM 1060 Query: 192 EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH 251 L G + F G R ++T+A P++ YG + L + DITE+K+LE + Sbjct: 1061 HQRVLAGETVQMEFEILGLKGGRRVLETHAVPMKEYGQTVQLAVTRDITERKKLEADIHQ 1120 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A +D +T L NRR M + +L+ +D D FK +ND +GH GD +L Sbjct: 1121 LAFYDTLTHLPNRRLMNERLAHAIMASRRSERYCALMFLDLDNFKPLNDTHGHVVGDALL 1180 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAETIRVSVAKVSIS 365 +AR L++C R+ D V R+GG+EF ++L + A ++AE IR S+A+ + Sbjct: 1181 VEVARRLKTCVREIDTVSRFGGDEFTVMLSELDVTLSDSVMQAQTIAEKIRGSLAEPYLL 1240 Query: 366 GL-----------PRFTVSIGVAHHEGNESI-DELFKRVDDALYRAKNDGRNRVL 408 + +VSIG+A G+++ DE+ K D A+Y+AK GRN++ Sbjct: 1241 TIRHEGVADTIVKHHCSVSIGIAVFIGHDAEGDEILKWADAAMYQAKAAGRNQIC 1295 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 76/263 (28%), Gaps = 24/263 (9%) Query: 1 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFS----QLRTGPYSVSSQK 56 M++ L+ + IV + +I+AN A + +M R + S Sbjct: 742 MLSEQKAMLE--NDLIGIVRVKDRTIIWANPAYEKIMGYQPGEMTGMPTRQNFANDKSYL 799 Query: 57 ELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 EL K L + + + + L T ++ T + Sbjct: 800 ELGKVAYPLLESGKVFRAQLEHVCKNGQRIWVDMSGSMLNSTRGESLWA--FLDITDRKR 857 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY-NHETMCQKH 175 K +S +G N + L GY + E + H Sbjct: 858 TETILQATNLKMNSL-----LSSMAEGAYGIDTNGHCTFVNPSFLRILGYEHAEEVIGAH 912 Query: 176 TWEINML--------GRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY 227 E+ + H + DGS V+ +A PI I Sbjct: 913 IHELIHHSHADGTIYPAAECKMYMAYQKNEKAHSVDEVFWRR-DGSAIPVEYWAQPIVID 971 Query: 228 GD-KLMLCIVHDITEQKRLEEQL 249 G ++ DI+E+K E QL Sbjct: 972 GVITGVIATFIDISERKLAEAQL 994 Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 65/250 (26%), Gaps = 15/250 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 + ++I + N A L + ++K+ Sbjct: 626 KYRALSEAAFEAIFISEHGLG--LEQNRQASALFGYSDQEIIGKPGIEFIAEKD-----R 678 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA-N 122 L + E L ++ + G + T + Sbjct: 679 ALVKHNMSSGYELPY---EALCLHKNGATFPAIICGKMMHYRGRDVRVTSITDVTEQKNR 735 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 + + + + + + ++ +D I+ AN A GY M T + Sbjct: 736 EAQIRTMLSEQKAMLENDLIGIVRV-KDRTIIWANPAYEKIMGYQPGEMTGMPTRQNFAN 794 Query: 183 GRRVMPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + + G H +G V + + + DIT Sbjct: 795 DKSYLELGKVAYPLLESGKVFRAQLEHVCKNGQRIWVDMSGSMLNSTRGESLWA-FLDIT 853 Query: 241 EQKRLEEQLE 250 ++KR E L+ Sbjct: 854 DRKRTETILQ 863 Score = 75.9 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 77/252 (30%), Gaps = 32/252 (12%) Query: 27 IYANSAAKLLMQDL-----------TFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEIL 75 + N AA + D S +G S + S + I + + Sbjct: 497 LVLNGAADAYVGDAGTANYMIKKNGFLSLRFSGQTEYHSIHSVAATKSHPELATIIFKAI 556 Query: 76 TVQRKEEETALSCRLVLRKLTETEPV--------------IIFEGIEAPATLGLKASRSA 121 + KEE A+ R + K+ + ++F + + Sbjct: 557 SSIPKEESDAIFNRWLGLKIEQGFKAETLIQYGAGAGLLFLLFGYWVYRLRREIDQRKIL 616 Query: 122 NYQ-RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + Y + + S G ++ N A +GY+ + + K E Sbjct: 617 EKSVEENREKYRALSEAAFEAIFI---SEHGLGLEQNRQASALFGYSDQEIIGKPGIEFI 673 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 + + H +S G P + +G+T + G + + + D+T Sbjct: 674 A-EKDRALVKHNMS--SGYELPYEALCLHKNGATFPAIICGKMMHYRGRDVRVTSITDVT 730 Query: 241 EQKRLEEQLEHA 252 EQK E Q+ Sbjct: 731 EQKNREAQIRTM 742 >UniRef50_C5V740 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Gallionellaceae RepID=C5V740_9PROT Length = 565 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 11/293 (3%) Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 ++ +A+ F +S +I D +I+ N A Y E + +I Sbjct: 268 LEQANERLELFAKMFENSSE--AIIITDADKRILTVNPAFELITQYRSEEVIGCDP-KIL 324 Query: 181 MLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIV 236 G++ + G ++ +G G ++ + K+ + + Sbjct: 325 SSGKQTAEYYQAMWSTIEAAGKWSGEIWNRRKNGEVYPQWLSIGAVKNHNGKVINYISLF 384 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 DIT++K E ++E AH+D +T L NR F + + L+ +D D+FK Sbjct: 385 SDITQRKEDEHRIEMLAHYDVLTKLPNRALFADRLQHALQVADRSHRKVGLMFLDLDKFK 444 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 IND GH GD++L ++A L C R+ D V R GG+EF++LL +A+ I Sbjct: 445 AINDTLGHLAGDQLLQSVAERLSRCVRQSDTVCRQGGDEFMILLEEIHSPLDIEGVAQKI 504 Query: 356 RVSVAKVSISGLPR--FTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 + ++ G + SIG A + + ++L + D A+Y+AK GRN Sbjct: 505 ALEMSMPHQMGEESRVVSFSIGAAIYPDHAIDSEKLSQCADQAMYQAKEAGRN 557 >UniRef50_A6FAG7 Sensory box/GGDEF domain protein n=1 Tax=Moritella sp. PE36 RepID=A6FAG7_9GAMM Length = 550 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 85/413 (20%), Positives = 150/413 (36%), Gaps = 20/413 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 F T+ TS +++ + +AN A L + + Sbjct: 131 QQFRTVIETTSEGFLIIDNNFNITFANHALCQLTGYELAELKAHSAVYYIAPE-----FK 185 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + Q + + +E+ + T + + A + Sbjct: 186 HIFTQSVNQPGIQLHWREDLIIHRKDGQALNVRLTVTAMDDGTGFFAFITNITAHK---K 242 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + +R +++ +++ ++G I N GY+ + I Sbjct: 243 AQIQLQKLSRAVEHSASSIMI--TDKNGIIEYVNPRFCEVTGYSEAEAIGQTPS-IISTK 299 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 E+ L G + ++ +G+ P+ ++ + + DI Sbjct: 300 ETPPACHQELWSTILAGNNWHGETFNRTKNGAYYWSLMSISPVMDDNGEISHFISVSEDI 359 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDY-SLLLIDTDRFKHI 298 T QK + ++E A +D +TGL NRR Y ++++D D FK I Sbjct: 360 TTQKDQQIKIEKIALYDPLTGLANRRLLYDRLNQSTEILHRQQDAGIGVIMLDLDYFKLI 419 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRV 357 ND YGH GDE+L +A L C R D V R GG+EF +LL + +A+ + Sbjct: 420 NDTYGHDVGDELLKEVALRLTDCVRSEDTVSRPGGDEFTILLQDVSHPEDIKPVAQKMLQ 479 Query: 358 SVAKVSISGLP--RFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 S+ + + T SIGV+ + L K D ALYRAK+ GR+ V Sbjct: 480 SLRRSINIDKYSFKITCSIGVSIAPSHTIEPKLLLKYADLALYRAKDCGRDNV 532 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 57/223 (25%), Gaps = 14/223 (6%) Query: 37 MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT 96 L + ++ T ++ ++ +R + Sbjct: 37 FGYTAEEFLSKTRLFTEIIH-PEDRERITAEINVLLTTNTESFQQNYRIITNSGEIRDVC 95 Query: 97 ETEPVI------IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRD 150 + +F I T ++ K + + T S L+I + Sbjct: 96 VYSGPLQPNDHTVFYSIVHDIT---HQRQAEAALVKSEQQFRTVIETTSEGFLII--DNN 150 Query: 151 GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLA 210 I AN A GY + + + H + + Sbjct: 151 FNITFANHALCQLTGYELAELKAHSAVYYIAPEFKHIFTQSVNQPGIQLHWREDLIIHRK 210 Query: 211 DGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 DG +V+ + + +IT K+ + QL+ + Sbjct: 211 DGQALNVRLTVTAM--DDGTGFFAFITNITAHKKAQIQLQKLS 251 >UniRef50_Q21Y95 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y95_RHOFD Length = 504 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 81/416 (19%), Positives = 154/416 (37%), Gaps = 28/416 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ------DLTFSQLRTGPYSVSSQKELPKY 61 ++ +W + + + ++ K ++ D + T + L Sbjct: 93 AIEGSGDGLWDWNVADGSVYFSAQ-YKQMLGLTVDEMDQRLQEWETRVHPDDKAGSLMAL 151 Query: 62 LSDLQNQHDIIEILTVQR--KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 S L Q + R + R ++ ++ + GI T+ Sbjct: 152 QSHLDGQSPVYAAQYRMRCKDGSYKWILDRGMVVSRSDAGKPLRMIGIHTDITV------ 205 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +K A F +++ G I+D N + GY + + ++ + Sbjct: 206 -HKQAEEKLQLAASVFTHALEGIMI--TDAQGLIIDVNQSFSRITGYERDEVLGRNPH-L 261 Query: 180 NMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 GR+ + G ++ G + + + + Sbjct: 262 LSSGRQSQAFYAAMWRDLQEEGCWYGEVWNRRKSGEVYAHLQNISAVRDAQGQTRQYVSL 321 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 D T K ++QL+H AH DA+T L NR G +Q Q +L +D D F Sbjct: 322 FSDNTALKAHQQQLQHLAHFDALTDLPNRLLLADRLHQGMVQVQRRGQMLALAFVDLDGF 381 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAET 354 K IND +GH GD +L +A ++ R+GD + R GG+EFV ++ + A + Sbjct: 382 KLINDSHGHEAGDHLLMTVATRMKQALREGDTLARLGGDEFVAVMFDLADEAACKPMLHR 441 Query: 355 IRVSVAKVSI--SGLPRFTVSIGVAHHE--GNESIDELFKRVDDALYRAKNDGRNR 406 + ++A+ + + + S+GV + D+L ++ D A+Y+AK G+NR Sbjct: 442 LLAAIAQPAQFGGHTLQVSGSLGVTFYPQVQELDADQLLRQADQAMYQAKLAGKNR 497 >UniRef50_C4KDN7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KDN7_THASP Length = 583 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 10/317 (3%) Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIV 154 L E V + E A RS + Y F + + ++L+ +IV Sbjct: 260 LIERRTVELAEANRRLAGEVDLHRRSEQRLAASESRYRAIFDSAAEGIMLL--DAALRIV 317 Query: 155 DANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGGHKPLNFVHKLADG 212 N A GY E + + + GR E+ + G ++ DG Sbjct: 318 QVNPAFCEITGYAAEEVLGRKPSMLGS-GRHDRAFFRELLATLAAAGRWQGEVWNRRKDG 376 Query: 213 STRHVQTYAGPI-EIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 A I E + + + DIT +K+ EE+L A+HDA+TGL NRR F Sbjct: 377 DLYVQWMSAVRIGEADAPEGFVATMTDITSRKQTEEKLRFRANHDALTGLPNRRLFEDRL 436 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 + L + ++L+L+D D FK +ND +GH GD +L + R LE C R D V R Sbjct: 437 QSAIASALRHGERFALMLVDLDHFKGVNDRFGHLAGDALLVEVGRRLELCVRASDTVARL 496 Query: 332 GGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP--RFTVSIGVAH-HEGNESIDE 387 GG+EF ++L + A +AE I ++A G S+G+A + + E Sbjct: 497 GGDEFAVILGEVGGREDAAEVAERICAAMALPFELGEGVAHIGASVGIALGPQDDADAGE 556 Query: 388 LFKRVDDALYRAKNDGR 404 L +R D ALY K+DGR Sbjct: 557 LQRRADAALYAVKHDGR 573 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 18/184 (9%), Positives = 42/184 (22%), Gaps = 28/184 (15%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 D + ++ +++ N A + L P + S + + Sbjct: 295 RYRAIFDSAAEGIMLLDAA-LRIVQVNPAFCEITGYAAEEVLGRKPSMLGSGRHDRAFFR 353 Query: 64 DLQNQHDII-----EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 +L E+ ++ + V + E + F T + Sbjct: 354 ELLATLAAAGRWQGEVWNRRKDGDLYVQWMSAVR--IGEADAPEGFVATMTDITSRKQTE 411 Query: 119 RSANYQRKKQGF----YARFFLT-------------NSAPMLLIDPSRDGQIVDANLAAL 161 ++ R F ++L+D N Sbjct: 412 EKLRFRANHDALTGLPNRRLFEDRLQSAIASALRHGERFALMLVDLD---HFKGVNDRFG 468 Query: 162 NFYG 165 + G Sbjct: 469 HLAG 472 >UniRef50_B6BHH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHH8_9PROT Length = 648 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 96/412 (23%), Positives = 163/412 (39%), Gaps = 20/412 (4%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQ-DLTFSQLRTGPYSVSSQKELPKYLSD 64 LD VW+ + + N + D + + + Y Sbjct: 233 RALLDSFPFLVWL-KDTQSNFLAVNKSFAKAAGLDDSSKLIGKNDLDFFPKDLADAY--- 288 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 D + T+++KE E + + + I+ + T+G + Q Sbjct: 289 --RADDKAVMGTLKKKELEELIEYDGERKWFETYKAPILNKEGHLFGTVGFARDTTEYKQ 346 Query: 125 -RKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + A F + +++ D IVD N A ++ GY+ + K+ +I G Sbjct: 347 NKDRLKLSASVFTYSHEGIVITDVD--NNIVDVNEAFMSITGYSKVEVLGKNP-KIFQSG 403 Query: 184 RRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 R ++ + G +K G + K+ + I DI Sbjct: 404 RNDDDFYKKMWKCLMQDGSWQGELWNKNKAGEEYAEHLTISAVYDDNQKVQNYVAIFTDI 463 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 TEQK +E+LEH AH+D +T L NR F Q Q ++ ID D FK +N Sbjct: 464 TEQKAQQERLEHMAHYDMLTNLPNRVLFSDRMHQAIAQTARREQKIAVAYIDLDGFKEVN 523 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVS 358 D YGH GD++L LA + + R+GD + R GG+EFV LL ++ +S + + Sbjct: 524 DRYGHDVGDKLLILLAERMSNLLREGDSISRVGGDEFVALLIDISDKESVISFLKRLLEV 583 Query: 359 VAKVSISGLPR--FTVSIGVAHHEGNE--SIDELFKRVDDALYRAKNDGRNR 406 ++ + SIGV + E +D++ ++ D A+YRAK G+N Sbjct: 584 TSQAVEIDDLSLNVSASIGVTFYPQKELLDVDQIIRQADQAMYRAKLSGKNC 635 Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 52/150 (34%), Gaps = 7/150 (4%) Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 + + + + + +++ RD +V AN GY Sbjct: 78 EDSKDEILFLQKETKDKLHIEKERARQYLDITGTMIVALDRDANVVLANKETCKALGYKS 137 Query: 169 E-TMCQKHTWEINMLGRRVMPIMHEISHLPGG----HKPLNFVHKLADGSTRHVQTYAGP 223 E + K+ ++ ++ + + GG +K DG +R ++ Sbjct: 138 ENDLLGKNWFKESLPDSVYETVKELFQDIIGGNIMPYKTYENELLFIDGKSRLIEWNNEH 197 Query: 224 IEIYGDKLM--LCIVHDITEQKRLEEQLEH 251 I+ ++ L DITE ++ EE+L+ Sbjct: 198 IKDINGNIIGVLSSGRDITESRKDEEKLKK 227 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 76/415 (18%), Positives = 141/415 (33%), Gaps = 27/415 (6%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 N + +W V Y + K L+ + P+ E + Sbjct: 83 NLTETSNDWIWEVDT-SGSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFA 141 Query: 67 NQHDIIEILT------VQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 E + + R+ L V + + GI+ T+ + Sbjct: 142 AISAEQEAIINLVNTNLHRQGRRVILETSGVPF-YDQHGTWQGYRGIDRDITV---RQQL 197 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + R+ Y + + G I+D N A GY + + K+ I Sbjct: 198 EEWLRQSAMVYENMWEGA------VITDPAGTILDVNPAFSRITGYAKDEVIGKNPR-IL 250 Query: 181 MLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIV 236 R + + G ++ +G + + + + Sbjct: 251 KSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVF 310 Query: 237 HDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 D+++ K+ E +LE A++D +T L NR + E + ID D+F+ Sbjct: 311 TDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFR 370 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETI 355 +N+ + GD++L +++ SC R D + R GG+EFVL+ A A + Sbjct: 371 VVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETAREL 430 Query: 356 RVSVAKVSISGLPR---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 S+ + + SIG+ + +L K + A+Y AK +GRNR Sbjct: 431 LASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNR 485 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 86/401 (21%), Positives = 143/401 (35%), Gaps = 23/401 (5%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILT 76 W V Q+ ++ +L Q SV ++ + + + Sbjct: 159 WYVDFVSGQMDWSAETCRLFGQAPGCVPSYELFLSVVHPEDQALVEAAWRQAVARGDYDL 218 Query: 77 VQR---KEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 R E + R R+ + + G T + A Sbjct: 219 THRVIVGGEVRWVHERAEFRRAAD-GAALAGIGTVQDIT-------DRKLAEQSLRQAAT 270 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 F + +I +I+ N A GY E + + + GR + Sbjct: 271 VFE--NTGEGVIIADAKNRIIAVNRAFTVITGYGPEEVIGRSP-NLLRSGRHDAAYYDAM 327 Query: 194 SHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQL 249 GH ++ +G + + K + + DI+ K E +L Sbjct: 328 WRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARL 387 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 + AH+DA+T L NR G + + ++L +D DRFK++ND GH GDE Sbjct: 388 QRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDE 447 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLP 368 +L +AR L S R D + R GG+EFV+LL R + A+ I + + Sbjct: 448 LLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASG 507 Query: 369 R---FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG++ + + +L D ALY+AK GRN Sbjct: 508 QEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRN 548 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 5/128 (3%) Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGR-R 185 + P L+ G+ + N A + G + ++ L Sbjct: 17 EDSLLRALIDV--IPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDLSTAD 74 Query: 186 VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--GDKLMLCIVHDITEQK 243 G DG V T P G + ++ I D+T + Sbjct: 75 SYRGYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFR 134 Query: 244 RLEEQLEH 251 E L Sbjct: 135 ETAEALRR 142 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 152/404 (37%), Gaps = 20/404 (4%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI-- 74 W + P + ++ A++ D+T + + +S +L+ + + Sbjct: 225 WDLVPHTGAMTWSVEMARIF--DITAQPHASHDAAGASVYSQADFLAAVHPDERARVVAA 282 Query: 75 ------LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 E ++ ++ + + ++G + Q + + Sbjct: 283 QAAASAEHRPCDIEFRIVTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDE 342 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 A NS ++ +G+I N A GY E + G Sbjct: 343 MRLAASVFDNSLN-AILIADANGRIRKVNRAFTAITGYTAEEAVGDTPR-LMKSGLHSPG 400 Query: 189 IMHEISHLPG--GHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR 244 E+ G +++ DG V+ + + + I HDITEQK Sbjct: 401 FYGEMWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAGAVAYYIGIFHDITEQKA 460 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 +++ A++D +TGL NR + + + + ++L +D DRFKHIND GH Sbjct: 461 SAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGH 520 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETIRVSVAKVS 363 GD +L A+A+ L+ R D + R GG+EF++LL A I + Sbjct: 521 PVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPF 580 Query: 364 ISGLPRFTV--SIGVAHHEGNE-SIDELFKRVDDALYRAKNDGR 404 R +V S+G++ + I LFK D ALY+AK GR Sbjct: 581 QLEEHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAGR 624 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 20/178 (11%) Query: 91 VLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF-----FLTNSAPMLLI 145 LR + G E ++ ++ R N R G + ++ ++I Sbjct: 32 ALRLANAALESQLLAGSEQAESMFVQLERQRNALRDAHGREQALSAFAQRVMDTVGGVVI 91 Query: 146 DPSRDGQIVDANLAALNFY-----GYNHETMCQKHTWEINMLGRRVMPIMHEI------S 194 G++ N N G + + + H ++ L + + ++ + Sbjct: 92 ALDPQGRLRQRNRHCQNDLAPLPEGSSVDLLL--HPQDLAALEAALPHLPWQVHSVLFET 149 Query: 195 HLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG--DKLMLCIVHDITEQKRLEEQLE 250 G + DGS R+ A + ++ + DI+E KR E+ L Sbjct: 150 VRRQGGYRAEHQFAMRDGSYRYHLVEAAMLYSAQNKEEGAVLSGTDISELKRQEQHLR 207 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 90/409 (22%), Positives = 155/409 (37%), Gaps = 24/409 (5%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ----NQHDI 71 +W +P + + + L+ + + R + + + + N+ + Sbjct: 264 LWESNPESHEWEFVAGDTRKLLGFPSRNLGRGELRARHIHPDDLPRVREAAHAAGNEPQV 323 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 ++ R + R +L + G+ T R+A ++ + Y Sbjct: 324 VDYRFAHR--NGQWIWLRDILSSAEDPGSRRSLRGLTLDVT---AHRRAAAALKESENRY 378 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 N ++ +G+ N A G+ E + R Sbjct: 379 QDV--VNHISEVIFRTDAEGRWTLLNPAWEALTGFKVEETLGQPMCAFVDPEDRDDAQSF 436 Query: 192 EISHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEE 247 + L GG + DGS R V YA +M + DI+++K EE Sbjct: 437 CSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYASARFDEDGHIMATFGTMMDISDRKEAEE 496 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 ++ A D +TGL NR + ++L ID D FK IND GH+ G Sbjct: 497 EIRRLAFFDGLTGLPNRTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVG 556 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAETIRVSVAK 361 D++LC +AR +E+ R+ D + R GG+EFV++L D A ++ + + + Sbjct: 557 DDLLCQVARRMENSVREADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLRE 616 Query: 362 VSISGLP--RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRV 407 T SIG G + ++E+ K+ D A+YRAKN GRN V Sbjct: 617 PFQLAGQNRHVTPSIGATLFSGRSLGVEEVLKQADLAMYRAKNAGRNTV 665 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 88/414 (21%), Positives = 155/414 (37%), Gaps = 24/414 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTG------PYSVSSQKE 57 ++ + + VW +P E + + A+ L+ + Sbjct: 375 EYRKLVESVKAVVWRATP-EAAFTFVSQEAESLLGYPVREWTSNTSFWVDKLHPDDRPWV 433 Query: 58 LPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKA 117 + + + D + ++ + T +V G+ T Sbjct: 434 VDFCARETRQLKDHVLEYRMRAADGRTVWLQDIVRVIPDRFGKPQELFGVMLDIT----- 488 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 + + F S ++ RD I++ N A L+ GY E + Sbjct: 489 --DRKAAEESLNLSKQVFDNTSE--AILIADRDRNILEVNQAYLDMTGYGREDCVGTYLA 544 Query: 178 EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 ++ I + + G + + G + L + + Sbjct: 545 LLDEPAGGGQLIGNLVQ--QHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVV 602 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 + DI+++K+ EE+L+ A HD +TGL NR E ++ Q +L ID DRF Sbjct: 603 LTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRF 662 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAET 354 K IND GH GD +L +A L C R+ D + R GG+EFV+L+ +++A Sbjct: 663 KIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARK 722 Query: 355 IRVSVAKVSIS--GLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I ++A+ I + SIG++ + I L K D A+YRAK+DG+N Sbjct: 723 IMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN 776 Score = 89.8 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 75/242 (30%), Gaps = 17/242 (7%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQ-----LRTGPYSVSSQKELPKYLSDLQNQHDII 72 ++ + ++IYAN A + + + + ++ Y ++ ++ Sbjct: 263 VMVIEDGKIIYANEAVRKIGGYDARDISMGSSFLSLIHPSDRERVAQHYKQRIRGEYTPS 322 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 + + + ++ E I ++ + + Y Sbjct: 323 RYEALAISKLGKPI-----PIEVAAANYRDGSERIVVLIIDISSRKQAEEALLQSRAEYR 377 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 + S ++ + + + A + GY ++ ++ L P + + Sbjct: 378 KLVE--SVKAVVWRATPEAAFTFVSQEAESLLGYPVREWTSNTSFWVDKLHPDDRPWVVD 435 Query: 193 ISHLPG---GHKPLNFVHKLADGSTRHVQ--TYAGPIEIYGDKLMLCIVHDITEQKRLEE 247 L + + ADG T +Q P + + ++ DIT++K EE Sbjct: 436 FCARETRQLKDHVLEYRMRAADGRTVWLQDIVRVIPDRFGKPQELFGVMLDITDRKAAEE 495 Query: 248 QL 249 L Sbjct: 496 SL 497 Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 4/142 (2%) Query: 113 LGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM- 171 L + ++ R++ G Y S + DG+I+ AN A GY+ + Sbjct: 231 LHVGRLQADERLRQQLGLYNALSNAQSDAGEGVMVIEDGKIIYANEAVRKIGGYDARDIS 290 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGD 229 + R H + G + + G ++ A + Sbjct: 291 MGSSFLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSE 350 Query: 230 KLMLCIVHDITEQKRLEEQLEH 251 ++++ I+ DI+ +K+ EE L Sbjct: 351 RIVVLII-DISSRKQAEEALLQ 371 >UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WX01_HALHL Length = 698 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 148/407 (36%), Gaps = 34/407 (8%) Query: 22 FEEQLIYANSAAKLLMQDLTFSQLRT----------GPYSVSSQKELPKYLSDLQNQH-D 70 + + N AA ++ QL P S+ + L ++ Sbjct: 35 RDGHFVACNPAAARMLGWDDPQQLIGLRPEAISPQIQPDGASAADRVQSLLRAAVSEGAQ 94 Query: 71 IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGF 130 E + + L L TL R + +++ + Sbjct: 95 RFEWIHTSPEGGRLWFEIVLTPLHLD-------------DETLCCATLRDISRRKEMERR 141 Query: 131 YA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 + + ++ D +I+ N A GY E + + + G Sbjct: 142 LQLSAKVFTATRDGILITDADSRILQVNDAFTRITGYAEEELLGRTPRVLQS-GHHDADF 200 Query: 190 MHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRL 245 + G + G+ + + ++ + + D+TE KR Sbjct: 201 YRVMWESIHQQGSWSGELWDRTKYGTLQPKWVTISKVTGAYGEVINFIAVFSDLTELKRS 260 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 +E+L+ A+HDA+TGL NR F + + ++L ID D FK +ND GH+ Sbjct: 261 QERLQFQAYHDALTGLANRLLFKDRMARALERSRQSEEQLAVLFIDLDHFKDVNDSLGHT 320 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI 364 GD +L +A L++ D + R GG+EF + L AL+ AET+ + + Sbjct: 321 AGDRILRQVAHRLQARLGADDTLARLGGDEFSICLAEIRDHRDALACAETVHQELERPFQ 380 Query: 365 SGLP--RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNRVL 408 + SIG++ + E+++EL + D AL+ AK +GRN Sbjct: 381 YSQRWFQCRCSIGISMYPDNGETVEELIRNADSALHNAKAEGRNTTC 427 >UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT Length = 462 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 125/323 (38%), Gaps = 11/323 (3%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVD 155 + + + + R A F + S ++ I+ Sbjct: 142 EQLDAIKTLADSVMAHLDLRLSHREIRKYVDDLQLAASIFESASE--AVLVTDPQNHIIT 199 Query: 156 ANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPG--GHKPLNFVHKLADGS 213 N A GY+ + K+ + G++ + GH +K +G Sbjct: 200 VNPAFTAMTGYSLSEVAGKNPNILCS-GKQSPAFYQRMWQSLADMGHWSGELWNKRKNGE 258 Query: 214 TRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 + ++ + I D+TE+K+ +E + A++D +T L NRR F Sbjct: 259 LFAEWLSINVLFNEDGSKRMYVAIFSDVTEKKQADEIIWRQANYDMLTQLPNRRLFCDRL 318 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 E +LL ID D FK +ND GH GD +L +A L + R+ D V R Sbjct: 319 EHEIRGAHRAGCLLALLFIDLDLFKEVNDSLGHEAGDALLVKVAERLTASVRESDTVARM 378 Query: 332 GGEEFVLLLPRTP-LDTALSLAETIRVSVAKVS--ISGLPRFTVSIGVAHHE-GNESIDE 387 GG+EF +LP+ L+ +A I ++++ + + S+GVA + ++ E Sbjct: 379 GGDEFTAILPQIDSLEDVERVAALIVKALSEPFEVNGAIVNISASVGVAIYPRDAKNTTE 438 Query: 388 LFKRVDDALYRAKNDGRNRVLAA 410 L + D A+Y AK GR A Sbjct: 439 LLSQADSAMYVAKEQGRGCYRMA 461 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 152/411 (36%), Gaps = 30/411 (7%) Query: 15 PVWIVS-PFEEQLIYANSAAKLLMQDLTFSQLRTG---PYSVSSQKELPKYLSDLQNQHD 70 P+ ++ + + N AA+ + + + ++ ++ Sbjct: 546 PLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGRSAGILFPEDVLEQAEAIWREVSG-GS 604 Query: 71 IIEILTVQRKEEETALSCRLVLRKLT-ETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 ++T + + C LT VI + T + Sbjct: 605 GNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDIT-------RREAVEAELR 657 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 A F T+ ++ DG+I+ N A GY E + ++ + G Sbjct: 658 LAATTFETD---EAILIAGADGRILRVNAAFSRITGYRQEDVVGRNPR-LFKSGLHGAEF 713 Query: 190 MHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRL 245 E+ G ++ +G + + + I DI+E KR Sbjct: 714 YREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDITHYVAISSDISELKRT 773 Query: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305 EE++ A++D++TGL NR + +LL +D D FK +ND GH Sbjct: 774 EEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMDLDYFKTLNDSLGHH 833 Query: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLL----PRTPLD--TALSLAETIRVSV 359 GD +L +A L++C + R GG+EFV+LL P + A+ A +R + Sbjct: 834 MGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVAAGQAIVHARRVRELL 893 Query: 360 AKVSISGL--PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 + +VSIG+A + +++ K+ D A+Y AKN+GR+ V Sbjct: 894 SAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGV 944 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 79/248 (31%), Gaps = 15/248 (6%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDLTFSQL------RTGPYSVSSQKELPKYLSDLQNQHD 70 W+ P +++ ++ + + ++ + ++ + L ++ Sbjct: 421 WVYDPATDRMTWSEETYR-IFGLPFDGEVPHRYQEFAALFVPEDRELIEAALRGGRDDLL 479 Query: 71 IIEILTVQRKEEETALSCRL-VLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 +E R+ + V + + + +G T + + R+ + Sbjct: 480 GVERPLCVRRADGAVRQVNFKVELQGRRGDSGPVLQGTLQDVT---ERWEAERALRQSEE 536 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 P+ +I+ D + N AA +GY + M + + Sbjct: 537 RLRLHVE--HLPLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGRSAGILFPEDVLEQAE 594 Query: 190 MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEE 247 G + + ADG T + Y P+ ++ +V DIT ++ +E Sbjct: 595 AIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEA 654 Query: 248 QLEHAAHH 255 +L AA Sbjct: 655 ELRLAATT 662 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 101/405 (24%), Positives = 165/405 (40%), Gaps = 21/405 (5%) Query: 17 WIVSPFEEQLIYANSAAKLLMQDL-----TFSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 W + +++++ + D T+ + + Q + + ++ + D Sbjct: 263 WDYDLEDGSILWSDELFNIFEVDSDEFTPTYETIMNFIHPEDRQSFQEMFQNAIKQKCDY 322 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 V + + + V G T K S+ +Q K Sbjct: 323 SLSYRVVLGNNIEKIIYQKGRVEYDMLGNVKRITGTAQDITQRYKTSKELEFQSK----- 377 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 L NS + DG + N A+ GY M E++ + ++ Sbjct: 378 ----LLNSVTESIFVHDLDGNFIYLNEASYITRGYTKSEMLGMKVQELDYSDEKNSAEIY 433 Query: 192 EI-------SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKR 244 E L H+ DG ++ I+ ++ I DI+E K Sbjct: 434 EENLANLQEQLSKKEKAVLEVSHRTKDGKILPIEITCKLIKEKDKSYIISIARDISELKA 493 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 + + LE A+ D +TG+ NRR+F I + + + SL++ID D FK IND YGH Sbjct: 494 MNKTLEKMANTDNLTGIYNRRKFEEIIKIEMERSARYNSNLSLIMIDIDHFKRINDTYGH 553 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSI 364 +GD V+ + R D+ RWGGEEF++L P+T A LAE +RV++ V+ Sbjct: 554 DEGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIVLCPQTESKNASILAEKLRVAIESVNY 613 Query: 365 SGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 L + T S GV + +E KR+D ALY AK++GRNRV+A Sbjct: 614 ETLGKITCSFGVTSYIKDEDKSSFIKRLDTALYSAKDEGRNRVVA 658 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 99/417 (23%), Positives = 165/417 (39%), Gaps = 16/417 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 D +P+W+ + N A L + +++P Sbjct: 731 KYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGYTREEFLAMTIRDIRPPEDVPLLEQ 790 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + + R + + + T + + G +A L + Sbjct: 791 YILQINP-----HFNRSGQWRHRKANGEIIDVEITSHGLEYAGRKARLVLAHDITERLKA 845 Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 ++ Q RF AP+ ++ + DG+IV N A GY+ + + W Sbjct: 846 EKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTELSGYHLDELSTIADWTEKAY 905 Query: 183 GRR---VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVH 237 G R V ++ ++ + G + F + G TR + P+ G +L++ + Sbjct: 906 GERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDFSSAPLGKLADGRRLIISMAI 965 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAI-AQDYSLLLIDTDRFK 296 DITE+K+ EEQL H+ HD +TGL NR E + +++L ID DRFK Sbjct: 966 DITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNYLFAILFIDLDRFK 1025 Query: 297 HINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL-DTALSLAETI 355 +ND GH GD++L +A L+ C R D V R+GG+EFV+LL + A +A+ I Sbjct: 1026 VVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLTIWTDATKMAQRI 1085 Query: 356 RVSVAKVS--ISGLPRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + SIG+ ++ EL + D A+YR+K GR R Sbjct: 1086 TEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEAGRARYTM 1142 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 79/239 (33%), Gaps = 13/239 (5%) Query: 25 QLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEET 84 L++ N + + + + G + E S L + Sbjct: 632 NLLWVNREWEKIWG-WSLENRQKGDLLAEFEPESEYRQSVLNYIKSAQGKW-----RDFK 685 Query: 85 ALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLL 144 L + + + A + R R+ + Y FF N P+ + Sbjct: 686 ILVRDGRIIDTSWANVKLSDGTSIAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWV 745 Query: 145 IDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLN 204 D ++ N A + YGY E +I + + + P ++ Sbjct: 746 YDL-ETFAFLEVNQATIEHYGYTREEFLAMTIRDIRPPEDVPLLEQYILQINPHFNRSGQ 804 Query: 205 FVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE------HAAHHDA 257 + H+ A+G V+ + +E G K L + HDITE+ + E+ L+ H A DA Sbjct: 805 WRHRKANGEIIDVEITSHGLEYAGRKARLVLAHDITERLKAEKALQESKERFHRAIVDA 863 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 72 IEILTVQRKEEETALSCRLVLRKLTETE--PVIIFEGIEAPATLG--LKASRSANYQRKK 127 E + + E L L I+ + +L + + R Sbjct: 248 YEQIYRKWYGEPENFWTVGRLFWLMSGLLITTILLMSLWRYISLRPFYRLQQIEAALRAS 307 Query: 128 QGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + Y S + G + N A ++ + W++ + Sbjct: 308 ESRYRGIVEDQSE--FICRYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQ 365 Query: 188 PIMHEISHLPGGHK-PLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR 244 + S P +L+ G R Q I + + DIT+ K+ Sbjct: 366 VAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQ 425 Query: 245 LEEQLEHA 252 +E L Sbjct: 426 VEAALRQL 433 Score = 81.3 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 20/253 (7%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPY--SVSSQKELPKYLSDL 65 L+ +W + +L Y + + + + S + L + + L Sbjct: 486 ALEGSGDTIWEWNLGTGEL-YCDPNWIRRLGYDPREEAINIEWWRSKIDPETLSDHEAAL 544 Query: 66 QN------QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 +N ++ +E + E + R + + G T + Sbjct: 545 ENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQE 604 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC-QKHTWE 178 + R++Q P++L + ++ N +G++ E E Sbjct: 605 N---LRQQQELLKTIVE--QIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQKGDLLAE 659 Query: 179 INMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +++ I G + + + DG + + I D Sbjct: 660 FEPESEYRQSVLNYIKSAQGKWRDFKILVR--DGRIIDTSWANVKLSDGTS---IAIGQD 714 Query: 239 ITEQKRLEEQLEH 251 ITE+KR+EE L Sbjct: 715 ITERKRIEEILRE 727 Score = 63.2 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 75/301 (24%), Gaps = 53/301 (17%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV---SSQKELPK 60 ++ + + P L + N A Q + L + + Q ++ + Sbjct: 310 RYRGIVEDQSEFICRYRPG-GTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQVAQ 368 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRL-VLRKLTETEPVIIFEGIEAPATLG----- 114 ++ L ++ +I R + + E +I F+ + T Sbjct: 369 NIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEA 428 Query: 115 ------------------------LKASRSANYQRKKQGFYARFFL------------TN 138 + K Q Y + Sbjct: 429 ALRQLNEELEQRVEQRTAELAAEIRERQEIETALIKSQAKYEQLVEKLSKSEERLQLALE 488 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYN-HETMCQKHTWEINMLGRRVMPIMHEISHLP 197 + + + + + + + GY+ E W + + + + Sbjct: 489 GSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRSKIDPETLSDHEAALENYL 548 Query: 198 GGHKPL---NFVHKLADGSTRHVQTYAGPIEIYGDKL---MLCIVHDITEQKRLEEQLEH 251 G + + +G + I + +L DITE K+ +E L Sbjct: 549 NGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQENLRQ 608 Query: 252 A 252 Sbjct: 609 Q 609 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 93/399 (23%), Positives = 164/399 (41%), Gaps = 20/399 (5%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK-YLSDLQNQHDIIEILTV 77 ++ + ++IY N A + L + L ++ +I Sbjct: 208 ITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLERIKEWKGLIRESVN 267 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 RK+ T L + T + ++ RK + Y + Sbjct: 268 IRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDIT---ERKQAEEALRKSEERYR--IVL 322 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP 197 SAP ++ +G++ N A +G+ + ++ + + ++ E + Sbjct: 323 ESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVENVPENKLIFEKINCG 382 Query: 198 GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIV--HDITEQKRLEEQLEHAAHH 255 + DG V DKL I+ DITE+K+ EE+++ A+H Sbjct: 383 KTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYH 442 Query: 256 DAMTGLLNRRQFYHITEPGQMQHLAI--------AQDYSLLLIDTDRFKHINDLYGHSKG 307 D +TGLLNR+ FY E ++ + ++L +D DRFK++ND GH G Sbjct: 443 DVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVG 502 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSI-- 364 DE+L +A L++C RK D +FR GG+EF ++L T +A+ IR ++A+ Sbjct: 503 DELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIK 562 Query: 365 SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKND 402 TVSIG++ + + ++ L K D A+Y AK + Sbjct: 563 DHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEE 601 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 14/225 (6%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLS------DLQNQHDIIEILTVQRKEEETALSCRLVL 92 D + YS + +++ + +Q EI + + Sbjct: 91 DQHIEIVLVTAYSDVNPRDIAPRIPPAHKLLYIQKPFHPQEIHQLASALSSKWRTEHEFQ 150 Query: 93 RKLTETEPVII---FEGIEAPATLGLKASRSANYQRKKQGFYARF-FLTNSAPMLLIDPS 148 + + E I E + L + + +++ + + + + + Sbjct: 151 KVFEDLERRIEDRTVELMNMNEHLIEELLEEIDERKRAEKHLRQLKQAVETMQLGITITD 210 Query: 149 RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHK 208 D +I+ N A +GY E + + R + I G + V+ Sbjct: 211 LDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLERIKEWKGLIR--ESVNI 268 Query: 209 LADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 DG+T V + ++ + ++ DITE+K+ EE L Sbjct: 269 RKDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDITERKQAEEALRK 313 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 87/340 (25%), Positives = 130/340 (38%), Gaps = 15/340 (4%) Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPAT----LGLKASRSANYQRKKQGFYAR 133 QR+ L L + E L+ + + Y Sbjct: 512 QRRHNTDTLDNLLAKHRWESFTSSRQLEKTARQLAKEKHQRLRVQELIDNIDAAESRYQL 571 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI 193 + + + + + N +GY E + + + + Sbjct: 572 LIENSLVGIFVY---QHHRYTYVNPRFAEIFGYTPEEIVDSAPQPQLVHPDDQLFVDANN 628 Query: 194 SHLPGG----HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 + GG H FV G V+ G G ++ + DITE+K E+ + Sbjct: 629 LKILGGVNANHLRYEFVGLRKTGQPIDVEILIGRGISEGQPALIGSLLDITERKEAEKTI 688 Query: 250 EHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDE 309 EH A HD +TGL NR F E + ++L+ +D DRFK IND GHS GD Sbjct: 689 EHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDA 748 Query: 310 VLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVSISGLP 368 L +A+ L +C R+ D V R+GG+EF +LL + + +A I S+A Sbjct: 749 ALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDH 808 Query: 369 RF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 T SIG+A + L K D ALYRAK+ GRN Sbjct: 809 EVFMTCSIGIASYPKDGREAITLVKNADTALYRAKDLGRN 848 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 89/365 (24%), Positives = 143/365 (39%), Gaps = 16/365 (4%) Query: 52 VSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPA 111 + S ++ +L I R + L + + + Sbjct: 156 LHSAEDGSYHLPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPRDRQE 215 Query: 112 TLGLKASRSANYQRKKQ-GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 L + + Q++ Q +A+ F ++ ++ + +I+ N A GY + Sbjct: 216 VLLVVREITQRRQQENQLRLWAKVFEASNE--AILITDANFRIISVNRAYETIMGYREQD 273 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + T E+ + + L GH +++ G + Sbjct: 274 VLGVDTLEVGAK-LQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSR 332 Query: 229 DK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 + + I +DITE K Q+E AHHDA+TGL NR E Q + Sbjct: 333 GEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLG 392 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 +L ID DRFK++ND GH GD++L A+ L + R GD V R GG+EFV+L PR + Sbjct: 393 ILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTE 452 Query: 347 TALSLAE---TIRVSVAKVSISGLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAK 400 +LA+ +R + T SIG+A + E + L K D A+Y AK Sbjct: 453 G--NLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAK 510 Query: 401 NDGRN 405 GRN Sbjct: 511 EKGRN 515 >UniRef50_B3E7I1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E7I1_GEOLS Length = 648 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 100/417 (23%), Positives = 166/417 (39%), Gaps = 16/417 (3%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV-SSQKELPKYLSD 64 D + I+ P + + Y N AA+ ++ + + + + Q+ +Y + Sbjct: 229 RAITDTAGDAIMIMDP-QGAISYWNPAAEQMLGYRSEEVMGKNLHELLVPQRYHAEYQAA 287 Query: 65 LQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ 124 L N V + A+ ++ + + G + + S Q Sbjct: 288 LPNFFHTGSGDAVGKIRSLFAIRKDGQEIAVSHSLSAFLLNGEWHSVGILRDITESLQQQ 347 Query: 125 RKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHE-TMCQKHTWEINML 182 + L NSA + DG AN + L GY + K+ ++ Sbjct: 348 ESLKNSEENVRLLLNSAAEAICGIDLDGNSTFANPSFLKMLGYTDLVQVIGKNVHQLTHH 407 Query: 183 G-RRVMPIMHEISHLPGGHKPLNFVHK------LADGSTRHVQTYAGP-IEIYGDKLMLC 234 P E L +H +DGS V+ +A P I + Sbjct: 408 SYPDGTPFPVENCCLHRAIHDGLQIHLDSETLWRSDGSCFPVEIWAHPQITNNRLVGAVI 467 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 DITE++++E L+ AH+D +TGL NR F + ++ + +++ ID D+ Sbjct: 468 TFVDITERRKMEATLQQMAHYDILTGLPNRALFSDRVQQALVEAKRDRKCLAIMFIDLDK 527 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAE 353 FK +ND YGH+ GD +L +A ++ R+ D V R GG+EFV+LL AL +AE Sbjct: 528 FKPVNDNYGHAVGDLLLKEVANRIKLPIRESDTVARIGGDEFVVLLKNIKDGQDALVVAE 587 Query: 354 TIRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 IR S+ I + SIG++ L K D A+Y+AK GR+ V Sbjct: 588 KIRTSLNMPFILNTLSLGISSSIGISVFPEHGPDEVTLCKNADTAMYQAKVSGRDAV 644 Score = 100 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 12/199 (6%) Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 P +LS ++ + +R + + L ++ L V +F L + Sbjct: 160 PAFLSIMEKITFRFDEDAKRRIKLLSHLQNSILAVDLLILFLVFLFIFRPTLKNLEISVG 219 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 R + T++A ++ G I N AA GY E + K+ E Sbjct: 220 ----LLRDSEERLRAI--TDTAGDAIMIMDPQGAISYWNPAAEQMLGYRSEEVMGKNLHE 273 Query: 179 INMLGRRVMPIMHEI---SHLPGGHKPLNFV---HKLADGSTRHVQTYAGPIEIYGDKLM 232 + + R + H G DG V + G+ Sbjct: 274 LLVPQRYHAEYQAALPNFFHTGSGDAVGKIRSLFAIRKDGQEIAVSHSLSAFLLNGEWHS 333 Query: 233 LCIVHDITEQKRLEEQLEH 251 + I+ DITE + +E L++ Sbjct: 334 VGILRDITESLQQQESLKN 352 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 80/331 (24%), Positives = 132/331 (39%), Gaps = 12/331 (3%) Query: 83 ETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPM 142 L L E + V G L R A+ + ++ +SA Sbjct: 320 GRGEPVSLPPLALEEADEV----GRALAQAQELLHQREADRAQAEEKLALAATALDSAVE 375 Query: 143 LLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKP 202 ++ R G+I N A + GY + + + + + G Sbjct: 376 GVVIA-RGGRIATVNRAFTSITGYRSAEVIGQPLAILLAEAEKTHRNDRRRAMCETGQWQ 434 Query: 203 LNFVHKLADGSTRHVQTYAGPIEIY-GDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 + +G + + +++C+ DI+ K+ E +L+H AH+DA+T L Sbjct: 435 GEVHGRRKNGEMYPAWSSISRAAYGSDEMILVCVFSDISAAKQYEARLQHLAHYDALTEL 494 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NR F ++ +LL ID D FK IND GH+ GDE+L +A L C Sbjct: 495 PNRLLFRERLADMLVRAERHGNMLALLFIDLDGFKPINDTLGHAAGDELLRRVAERLGGC 554 Query: 322 ARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSI----SGLPRFTVSIGV 376 R D R GG+EF +LL + A +A I ++ + I + SIG+ Sbjct: 555 VRASDTTARLGGDEFAVLLDELRSPEEAGIIARNILDTLERPYILAGQPQCQYISASIGI 614 Query: 377 AHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 + + + L ++ D A+YRAK +G+NR Sbjct: 615 GCYPSDSLDAETLLRQADMAMYRAKQEGKNR 645 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 149/412 (36%), Gaps = 22/412 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT----GPYSVSSQKELPKY 61 ++ + + P ++ N A + + S + Sbjct: 222 YDLYNNAPCGYHSLDPR-GVIVDINETALRWLGYSRSELVGKVMFCDLLSEDCVQLCWDK 280 Query: 62 LSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSA 121 L L+ + + R ++ L L + F G + R Sbjct: 281 LGQLKKGGALSNLELNIRCKDGRLFCVLLTSTALQSEDG--EFRGSRCILVDYTERRRHE 338 Query: 122 NYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 ++ + ++ +I IV N A + GY + + ++ + Sbjct: 339 KELQQA------AVVFDAIREAVIITDDARNIVAVNNAFTDITGYTLDDVYGRNPR-LQQ 391 Query: 182 LGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 GR + GH +K +G + + + + Sbjct: 392 SGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFS 451 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DI+ K E+QL H A+HD++TGL NR F++ E + + +L+ ID DRFK Sbjct: 452 DISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKI 511 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIR 356 IND GH GD +L +AR L R D+V R GG+EF + L + A + A + Sbjct: 512 INDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLI 571 Query: 357 VSVAKVSISGLPRF--TVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRN 405 ++ + G + SIG+A + ++ L + D A+YRAK RN Sbjct: 572 ETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRN 623 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 84/246 (34%), Gaps = 14/246 (5%) Query: 17 WIVSPFEEQLIYANSAAKLLM-----QDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDI 71 W+ ++ +++ + L ++ + + + + L+N+ Sbjct: 105 WVWDLKRNEVYWSDQVYRNLGLSLHDNKASYEKFLECVHPDDRARIVKLVDEALENKQVY 164 Query: 72 IEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 V + E + C + G T R + RK + + Sbjct: 165 GIEHRVIWPDGEERIVCGAGEVIFDVQGNPVQMHGTIQDIT-----ERKRDENRKNEYAH 219 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + L N+AP G IVD N AL + GY+ + K + + V Sbjct: 220 LIYDLYNNAPCGYHSLDPRGVIVDINETALRWLGYSRSELVGKVMFCDLLSEDCVQLCWD 279 Query: 192 EISHLPGGH--KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML--CIVHDITEQKRLEE 247 ++ L G L + DG V + ++ + CI+ D TE++R E+ Sbjct: 280 KLGQLKKGGALSNLELNIRCKDGRLFCVLLTSTALQSEDGEFRGSRCILVDYTERRRHEK 339 Query: 248 QLEHAA 253 +L+ AA Sbjct: 340 ELQQAA 345 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 159/419 (37%), Gaps = 23/419 (5%) Query: 9 LDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ 68 +L + + + N A + ++ + +L P++ + S +Q+ Sbjct: 298 FNLSPDLMCVG-GVDGYFRELNPAWQEVLG-WSREELLDRPWAALVHPD--DRASTMQDM 353 Query: 69 HDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQ 128 + E + E + V I R R + Sbjct: 354 DTLRERGVITNVENRYQCRDGTWRWISWNSAFVPEQGLIYGVGRDVTALRRMVEELRTSE 413 Query: 129 GFYARFFLTNSAPMLLIDPSR---DGQIVDANLAALNFYGYNHETMCQK-HTWEINMLGR 184 + + P +++ D Q + + G E + Q ++ R Sbjct: 414 ARLRA--MAATVPGVVLQWREVPGDRQFTYVSPRSREILGVPPEWLLQDWRALPVHPADR 471 Query: 185 RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEI----------YGDKLMLC 234 V + + G L G R + A P+ + Sbjct: 472 TVWELSLRDAMERRGDWMFEGRLVLPGGEVRWWRGEARPVHGGQSGAAELPEESGIVYCG 531 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 I+ D TE + +E+L A D +TGL NRR+F E +H +L+ ID DR Sbjct: 532 IITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDR 591 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK +ND +GH+ GDEVL ALA + R D V R GGEEF +LLP T + A+++AE Sbjct: 592 FKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAER 651 Query: 355 IRVSVAKVSIS---GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 +R V + G T+S+GV+ + D L + D ALYRAK GRNRV A Sbjct: 652 LRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVERA 710 Score = 84.0 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%) Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 Y + F +SA ++L+ + G I++ N AA FYGY +C +I LG Sbjct: 47 LYEQLFRYHSA-VMLLVDAETGCIIEGNPAASTFYGYPDGALCGMSINDIANLGPEEQA- 104 Query: 190 MHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQL 249 G H+LA G R V+ ++ P+ ++ L+ I+HDIT++ R EE L Sbjct: 105 RRLAELREGRLTCFTSRHRLASGEVRDVEVHSVPVRLFERTLLYTIIHDITDRVRAEEAL 164 Query: 250 EH 251 Sbjct: 165 RR 166 Score = 81.7 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 9/215 (4%) Query: 37 MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT 96 + + + + ++ ELP + T + + E R + Sbjct: 204 LGRVECAPMMESWRNMVHPDELPGLERARRRHLSGF---TPRYEAEYRVQGADGAWRWIQ 260 Query: 97 ETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDA 156 ET V+ +G P + +++ R L N +P L+ DG + Sbjct: 261 ETGQVVERDGDGLPLRVAGIVCDV---SVRRRAEEDRRRLFNLSPDLMCVGGVDGYFREL 317 Query: 157 NLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH-KPLNFVHKLADGSTR 215 N A G++ E + + + R + + G + ++ DG+ R Sbjct: 318 NPAWQEVLGWSREELLDRPWAALVHPDDRASTMQDMDTLRERGVITNVENRYQCRDGTWR 377 Query: 216 HVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE 250 + + + G L+ + D+T +R+ E+L Sbjct: 378 WISWNSAFVPEQG--LIYGVGRDVTALRRMVEELR 410 Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 68/237 (28%), Gaps = 16/237 (6%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSS--QKELPKYLSDLQNQHDIIE 73 + +V +I N AA + +++ +E + L++L+ + + Sbjct: 59 MLLVDAETGCIIEGNPAASTFYGYPDGALCGMSINDIANLGPEEQARRLAELR-EGRLTC 117 Query: 74 ILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYAR 133 + R + + E +++ I R+ R+ + Sbjct: 118 FTSRHRLASGEVRDVEVHSVPVRLFERTLLYTIIH----DITDRVRAEEALRRSEQHLEM 173 Query: 134 FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET-MCQKHTWEINMLGRRVMPIMHE 192 D V + G +W + + + Sbjct: 174 VMDGAGIGSFSWHALTDE--VACDTRWGEVLGLGRVECAPMMESWRNMVHPDELPGLERA 231 Query: 193 ISHLPGG---HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL---MLCIVHDITEQK 243 G + + ADG+ R +Q +E GD L + IV D++ ++ Sbjct: 232 RRRHLSGFTPRYEAEYRVQGADGAWRWIQETGQVVERDGDGLPLRVAGIVCDVSVRR 288 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 81/437 (18%), Positives = 141/437 (32%), Gaps = 39/437 (8%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 +L V++ +++ N AA+ + + L + ++ + Sbjct: 184 RFRALFELAPDAVYV-RGEGGRIVDCNRAAERMSGHPRETLLSLRTADLLPP-DIEVRID 241 Query: 64 DLQNQHDIIEILTVQR--------------------------KEEETALSCRLVLRKLTE 97 +L + + TA E Sbjct: 242 NLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCMEGICTAAHGPHEAEVSVE 301 Query: 98 TEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDAN 157 P+ + G A + + ++ + R F + + +G IV N Sbjct: 302 PLPLSLLRGKGMTALVVVHDISGRRTAERQARLFERVFRNALEGICI--TDPEGIIVAVN 359 Query: 158 LAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTR 215 A GY + + + ++ + G ++ +G Sbjct: 360 PAFTTITGYPADDAVGQSPRLLKSHH-HDSAFYEDMWRALVEEGRWEDEIWNRRRNGEVY 418 Query: 216 HVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEP 273 I + + + HDITE K E Q++H AHHDA+TGL NR Sbjct: 419 PEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRALLRDRLGM 478 Query: 274 GQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGG 333 + ++L +D D FK +ND GH GD L A + R D + R GG Sbjct: 479 AINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGG 538 Query: 334 EEFVLLLPRTPLD-TALSLAETIRVSVAKV--SISGLPRFTVSIGVAHHE-GNESIDELF 389 +EFV++L + A +AE + S+G+A + D L Sbjct: 539 DEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLV 598 Query: 390 KRVDDALYRAKNDGRNR 406 + D A+ RAK G+ R Sbjct: 599 RNADIAMSRAKEQGKRR 615 Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 11/179 (6%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 + E + + AN L + P + L + + + L Sbjct: 63 FLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLDEDRRVAEDSTPLLC 122 Query: 78 QR----KEEETALSCRLVLRKLTETEPVIIF-----EGIEAPATLGLKASRSANYQRKKQ 128 +R E E + P + A + + + + Sbjct: 123 ERMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALVEAEIEEEVRQRTAALAEST 182 Query: 129 GFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVM 187 + F AP + G+IVD N AA G+ ET+ T ++ V Sbjct: 183 ARFRALFEL--APDAVYVRGEGGRIVDCNRAAERMSGHPRETLLSLRTADLLPPDIEVR 239 Score = 40.9 bits (95), Expect = 0.092, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 2/113 (1%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 L ++ + L +G+ + AN + G + + +I + + Sbjct: 54 LLDNPLVALFLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLDEDRRV 113 Query: 196 LPGGHKPLNFVHKLADGSTRHVQTYAGPI--EIYGDKLMLCIVHDITEQKRLE 246 L AD + R + P+ E+ G +L + D+T E Sbjct: 114 AEDSTPLLCERMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALVEAE 166 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 150/411 (36%), Gaps = 24/411 (5%) Query: 6 FNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDL 65 LD L ++ + + +++ N + + + + K S + Sbjct: 565 QAALDSLP-GIFFMLGSDFRILSTNRNFDRFRETTSPGSPFSSIELHFPPDQREKIRSMV 623 Query: 66 QNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 Q E E +L T + + G + T+G+ S + Sbjct: 624 QG------GFRRGAAEAEVSLQGSSSREIYLLTSRLFLLGGEDCLITVGIDIS-ARRRAE 676 Query: 126 KKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRR 185 + R F S +++ +IV N A GY E + + + + Sbjct: 677 ATLELWGRVFECTSESIMI--TDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALRS-DVH 733 Query: 186 VMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITE 241 ++ G F + +G + + + + DI+ Sbjct: 734 DGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISA 793 Query: 242 QKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDL 301 QK E++++H AHHDA+T L NR Q + +++ ID D FK+IND Sbjct: 794 QKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDS 853 Query: 302 YGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE----TIRV 357 GH GD VL A L R GD V R GG+EFV++L ++ + + E + Sbjct: 854 LGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIIL--ADIEDSHQIEEIMKHRLLP 911 Query: 358 SVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + + +G + SIG++ D L + D A+YRAK GRN Sbjct: 912 LMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRN 962 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 13/176 (7%) Query: 96 TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQ-IV 154 E V F + + + F S P+ L S G + Sbjct: 404 EIGELVSCFNSMLERLNNDRITQQELVAAARASDAQRALFE--SIPLPLTVTSLSGHSLR 461 Query: 155 DANLAALNFYGYNHETMCQK---HTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD 211 AN AL + +T +++ G + + +L Sbjct: 462 HANGPALELF-MPDQTAAGLESWSPFDVIA-GENQRETFLSLLVEEKNIDEYELLLRLPG 519 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEH-----AAHHDAMTGLL 262 Q P+ G++ +L + I +K LEE + + A D++ G+ Sbjct: 520 APCFWSQVSVRPVSYQGEQALLTLFTPINLRKHLEEGVRNEKAFSQAALDSLPGIF 575 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 90/402 (22%), Positives = 150/402 (37%), Gaps = 23/402 (5%) Query: 16 VWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQ---HDII 72 VW E+ Y L + +SS+ L L N+ Sbjct: 389 VWAGDKVEDNFSY------RLRGTPCEDAMNHNVELISSRAALHYPEDKLLNELEVDSYF 442 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 V E + + + + E V G+ A +S + K+ A Sbjct: 443 GAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQRQSTH---KEMEMAA 499 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIM-- 190 F ++ ++ + +I+ N A GY+ + + + R + ++ Sbjct: 500 SVFKESAE--AIVICDSEDKILRVNPAFYKITGYSQIEVVGQSPQ-LLQSDRPIQSMLHN 556 Query: 191 HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQ 248 E + +G P++ + ++ I DITE+K EE Sbjct: 557 REAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEEH 616 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 + + AHHD++T L NR F + +++ ID D FK IND GH GD Sbjct: 617 IYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGD 676 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETIRVSVAKVSI--S 365 +L +A + RK D++ R+GG+EF +LL T D A + +A + + S Sbjct: 677 LLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPS 736 Query: 366 GLPRFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNR 406 + SIG+ +S+D L D A+YRAK GRN Sbjct: 737 SEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNC 778 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 97/414 (23%), Positives = 156/414 (37%), Gaps = 24/414 (5%) Query: 14 SPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKE-------LPKYLSDLQ 66 S V + E Y + + + + L G + ++ L + + Sbjct: 727 SDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAI 786 Query: 67 NQHDIIEILTVQRKEEETALSC-RLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQR 125 + L + AL C R RK+ +++ L +R + QR Sbjct: 787 GDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQR 846 Query: 126 KKQGFYA---RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 + + F ++A +++ G IV N + GY+ + + + Sbjct: 847 RAERELRMAATVFEHSTAAIMV--TDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLLTAD 904 Query: 183 GRRVMPIMHEISHLP-GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 + + H ++ L G + K G + L +C DI Sbjct: 905 RQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDI 964 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 +E+K E ++ A++DA+T L NR F Q Q L+ +D DRFK IN Sbjct: 965 SERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPIN 1024 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLP-----RTPLDTALSLAET 354 D GH+ GD +L +A L +C + D V R GG+EF LLLP L A+ +AE Sbjct: 1025 DSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAEL 1084 Query: 355 IRVSVAKVSISGLPR--FTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 I +A+ T SIGVA + L K D A+Y AK G+N Sbjct: 1085 ILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKN 1138 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 80/275 (29%), Gaps = 32/275 (11%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGP-----YSVSSQKELPKY 61 + + + ++I ++I++N + R G +E Sbjct: 588 DAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPDDQEYYWR 647 Query: 62 LSDLQ-----NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + +LQ ++ R R + V G+ T Sbjct: 648 IRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAKDITF--- 704 Query: 117 ASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMC---- 172 + N R+ Y L + ++ + + + + +GY+ E Sbjct: 705 TVEANNALRENGRRYR--MLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGL 762 Query: 173 ---QKHTWEINMLGRRVMPIMHEISHLPG--------GHKPLNFVHKLADGSTRHVQTYA 221 + ++ L + + H I G ADG ++ Sbjct: 763 HQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRI 822 Query: 222 GPIEIYGDK--LMLCIVHDITEQKRLEEQLEHAAH 254 + D+ +L I DI++Q+R E +L AA Sbjct: 823 VLMWDEHDRFEGLLGIARDISQQRRAERELRMAAT 857 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 45/237 (18%) Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS--ANYQRKKQGFYA 132 ++ + T + L+ E ++ G+ L L + Q Sbjct: 233 WQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLR 292 Query: 133 RFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + + ++ DG++ N A +G + Q H + + Sbjct: 293 QAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLP----DLEPGW 348 Query: 192 EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPI----------------EIYGDKLMLCI 235 G + G R P+ + G + + + Sbjct: 349 LTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQGGQ--VWV 406 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDT 292 + D+TE++ LE T RR++ I E +L ++D Sbjct: 407 LRDVTEEQHALGVLEE-------T----RRRYQDIFE---------GVGVALCVLDL 443 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 92/412 (22%), Positives = 157/412 (38%), Gaps = 15/412 (3%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK-YL 62 F + + + Q I+AN++ +Q + + + + Sbjct: 139 RLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKHDTLLFPPQLAQEMRA 198 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 ++ Q I V++ V L T PV +G Sbjct: 199 AEQQTLAQGEAIQHVRQFP-----LADDVKLWLLTTFPVQDMDGNFNHIGGIGIDITEQR 253 Query: 123 YQRKKQGFYARFFLTNSAPMLLID-PSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 + ++ P+L++D ++ N A GY+ + ++ + Sbjct: 254 KAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGRNCRFLQG 313 Query: 182 LGRRVMPIMHEISHLPGGHKPLNF-VHKLADGSTRHVQTYAGPIEIYGD---KLMLCIVH 237 R + + + + DGS + Y P+ + + + Sbjct: 314 HDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQK 373 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DITE ++ +E LE A++D +TGL NR + + +S+ ID D FK Sbjct: 374 DITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKR 433 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS-LAETIR 356 +ND GHS GDE++ L + L+SC R GD V R GG+EFVLLL LD ++ + + IR Sbjct: 434 VNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIR 493 Query: 357 VSVAKVSISG--LPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ I T SIG+A+ + D L D A+Y+AK G N Sbjct: 494 NTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN 545 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 11/219 (5%) Query: 34 KLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLR 93 +L++ D + Q G ++ +EL + + I E + + + Sbjct: 49 QLILSDYSLPQF-DGMSALHIARELAPEIPFIFVSGTIGEETAIHSLKNG----AADYII 103 Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 K + A + R + F + P + + GQ Sbjct: 104 KNNLSRLPSAVTSALERAEEKIMHKRMERELENSNRLFRVFM--QNLPAIAFIKDQQGQY 161 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFV-HKLADG 212 + AN + ++ HE + KH + E L G + LAD Sbjct: 162 IFANASTVDALQLPHEQIIGKHDTLLFPPQLAQEMRAAEQQTLAQGEAIQHVRQFPLADD 221 Query: 213 STRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQL 249 P++ + I DITEQ++ EE L Sbjct: 222 VKLW-LLTTFPVQDMDGNFNHIGGIGIDITEQRKAEEAL 259 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 91/419 (21%), Positives = 157/419 (37%), Gaps = 36/419 (8%) Query: 17 WIVSPFEEQLIYANSAAKLL--MQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEI 74 W Q + A L ++ G ++ + ++ + I Sbjct: 155 WQFDFKTNQFS-CSPEACHLMCLEGEAADMTLDGFFNSINDQD-----RKRVKEAVECSI 208 Query: 75 LTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 +++ + + C K + +F+ PA + + + Sbjct: 209 QSIKPLSQHCLIHCPDESHKYILNKSEPLFDEHNNPALMLGVVQDITQLKEAEYRLITLS 268 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEIS 194 + ++ +G I N A + GY E K T I G + Sbjct: 269 QAVEQSGSTILITDLNGVIEFVNPAFTHVTGYTPEEAVGKSTS-ILKSGMHPPEFYKNLW 327 Query: 195 H--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLE---- 246 + G +++ DG P+ + + DIT +K+ E Sbjct: 328 DTIISGDTWKGQIINRKKDGELYWESATISPVMGKDGNITHYSAVKEDITSRKKAEKLLK 387 Query: 247 ----------EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFK 296 ++L+ D +T + NRR+F + + SLL+ D D FK Sbjct: 388 ETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFK 447 Query: 297 HINDLYGHSKGDEVLCALARTL-ESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETI 355 H ND YGH GD+ L +A+ + ++ R DLV R+GGEEF ++L T L+ A +A I Sbjct: 448 HYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRI 507 Query: 356 RVSVAKVSISGLP-----RFTVSIGVAHHEGNE---SIDELFKRVDDALYRAKNDGRNR 406 + V ++I+ T+SIG+ ++ S+D L K D+ALY+AK GRNR Sbjct: 508 QEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNR 566 >UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD5_MARAV Length = 709 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 80/415 (19%), Positives = 140/415 (33%), Gaps = 25/415 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSV-----SSQKEL 58 + + + ++ + + N A + + P V + + Sbjct: 17 KRLALVATASRNMALILDAGGCIEWVNQAFEEHTGYSLSAVRGKLPSQVLAGPDTDPDTV 76 Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 + L + E + + +G+E + Sbjct: 77 SRIYRHLFR-GEAFEEDILHYTASGEPYWVHTYCTPVDGA------DGVEPGFVVIQTNI 129 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 + A F + ++ I+D N A GY+ + + + Sbjct: 130 SDRKNSERGLRIAASVFDRSHE--AIVITDHLNHIIDVNPAFSRITGYSRQEVLGLNPS- 186 Query: 179 INMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--GDKLMLC 234 I GR + H ++ +G + + G + Sbjct: 187 ILSSGRHSREYYRSMWQSIEKTDHWRGEVWNRRKNGEEYVELLSISRVHLEEPGKHYYVA 246 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 DIT K ++L+ AA++D +TGL NR+ + + ++ +D D Sbjct: 247 AFSDITALKNHAKELDRAANYDDLTGLPNRQLLEERLRSAKAHADRQKRSLAICYLDLDG 306 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK IND GH GDE L +A L R GD V R GG+EFVLL+ D + L + Sbjct: 307 FKGINDELGHDFGDEALRMVAERLTRSLRSGDTVARIGGDEFVLLIQG---DHSEPLYQR 363 Query: 355 IRVSVAKVS--ISGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNR 406 I SV++ T S+GV + + + L + D A+Y AK GRN+ Sbjct: 364 ILTSVSEPFELADKEVNLTASLGVTLYPEDDTDAEGLVRHADQAMYAAKEKGRNQ 418 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 9/291 (3%) Query: 123 YQRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINM 181 +++ + F + + +I +G I AN GY + K ++ Sbjct: 298 ERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKP-NMHK 356 Query: 182 LGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVH 237 G+ ++ G F+++ +G R P+ ++ L I Sbjct: 357 SGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEE 416 Query: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297 DIT QK + ++E AH D +TGL NR + +++ +D D FK+ Sbjct: 417 DITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKN 476 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357 IND GH+ GD +L LA+ L + R+ D + R GG+EFVLLLP ++A +A+ + Sbjct: 477 INDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMR 536 Query: 358 SVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ + S SIG+A + + L K D A+YRAK +GRN Sbjct: 537 AINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRN 587 >UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVB7_9AQUI Length = 525 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 18/403 (4%) Query: 10 DLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQH 69 + PV VSP L + SA + L +++ +L ++LP+ ++ Sbjct: 137 NSEGWPVKFVSPNVVNL-FGYSAEEFLTGKVSYPELVH-------PEDLPRVAEEV---K 185 Query: 70 DIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 E E+ + R K V IF G + T + +++ Sbjct: 186 RYSEQGVSSWTHEDYRILTRDGKVKWVLDHTVPIF-GRDRDITHYYGYLIDITEKHEQEE 244 Query: 130 FYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPI 189 + + +N ++L + ++ I+ AN A GY+ E + I + + + Sbjct: 245 LFRKLAESNPNGVILFNF-KNNSIIYANRAVSEITGYSEEELESLKDPLILIHPKDKHIV 303 Query: 190 MHEISHLPGGHK---PLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 + I G + + G T+ V+ + I G++ L + DIT++K E Sbjct: 304 IKNIQRRIKGERKPFSYSVRFLTKGGKTKWVKIVSSVITYRGEESTLVTLIDITKEKARE 363 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 +L A HD +TG+ NRR E +S++LID D FK++ND +GH Sbjct: 364 RKLHTLATHDQLTGVYNRRALLMFFEKYLHSARRYGIPFSVILIDLDNFKYVNDQFGHQT 423 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISG 366 GD VL A+ ++ R+ D+ RWGGEEF+ LLP +AE +R V + S Sbjct: 424 GDRVLKTFAKLVKGSLRRTDVFGRWGGEEFLALLPFNDKP--YMVAEKLRRKVEETEFSR 481 Query: 367 LPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLA 409 + R T S G + + ID + R D+ALY AK G+N + Sbjct: 482 VGRVTASFGATTYREGDDIDSMMARADEALYEAKRKGKNTTVV 524 >UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=Vibrio RepID=C9E5K7_VIBCH Length = 423 Score = 333 bits (854), Expect = 9e-90, Method: Composition-based stats. Identities = 91/393 (23%), Positives = 160/393 (40%), Gaps = 18/393 (4%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVS---SQKELPKYLSDLQNQHDIIEILTVQRKEE 82 + AN A + + + +E+ L + E +T +++ Sbjct: 33 VEIANPAFCKMTGYAIDELYGQSLKMLQGPATDQEVINRLRHCLTSGEYFEGMTTNYRKD 92 Query: 83 ETALSCRLVLRKL-TETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 + R + + E + F ++ T + + + P Sbjct: 93 GSPYLVRWNISPVRDEVGDITHFVSVQQDMT-------AYAKVEDTSKILGQALDAAAEP 145 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEI--SHLPGG 199 ++ +I+ N + + GY + + G + S + Sbjct: 146 --ILVTDAHAKIIFVNQSFIQVSGYEESELIGNTP-TLFKSGLHDDDFYKNVKASLMTKK 202 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDA 257 F++K DG+ H + I+ + + + D+TE+ R E+ L +A D Sbjct: 203 TFQAIFINKRKDGTLYHSEQSISAIKDQAGNITNYVSVGKDVTERLREEQALRESATVDQ 262 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +TGL NR + L+ + SL+L D D FK IND +GH GD++L ++ Sbjct: 263 LTGLFNRNHGKALLSEAYSFTLSREEPMSLILCDIDHFKQINDSFGHPVGDQILAQVSGL 322 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVA 377 L R D V RWGGEEF++LL A LAE +R+ +A + + TVS+GVA Sbjct: 323 LRKSVRGNDRVIRWGGEEFLILLENCTDMVAAELAERLRLRIASEQFQSVGKVTVSLGVA 382 Query: 378 HHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410 ES+++L R D+ALY++K +GRN++ A Sbjct: 383 SLFQKESLEQLISRCDEALYKSKRNGRNQLTLA 415 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 5/127 (3%) Query: 126 KKQGFYARFFLTNSAPMLLIDPSRD--GQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + + + +++ R + AN A GY + + + + Sbjct: 4 SELSLLQKAVMQSWNAVVITSADRAAGYPVEIANPAFCKMTGYAIDELYGQSLKMLQGPA 63 Query: 184 RRVMPIMHEISHL-PGGHKPLNFVHKLADGSTRHVQTYAGPIEIY--GDKLMLCIVHDIT 240 I L G + + DGS V+ P+ + + D+T Sbjct: 64 TDQEVINRLRHCLTSGEYFEGMTTNYRKDGSPYLVRWNISPVRDEVGDITHFVSVQQDMT 123 Query: 241 EQKRLEE 247 ++E+ Sbjct: 124 AYAKVED 130 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 87/394 (22%), Positives = 158/394 (40%), Gaps = 20/394 (5%) Query: 35 LLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRK 94 + ++ P + L + N+ E+ V + + L + Sbjct: 66 EMDGYQVCQHIKENPITSEIPVIFISALDEAFNKVKAFEMGGVDYITKPFQIKEVLARVQ 125 Query: 95 LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLID-PSRDGQI 153 L + E L + + + + + + T +++ D D I Sbjct: 126 LQLRLQHQTQQLKEQNQKLQQEIN-TRKELEIQLNLFNQAIFTCRNGVIITDATQSDNPI 184 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHK-PLNFVHKLADG 212 + N A GY+ + K+ + R + + L + + DG Sbjct: 185 IYVNQAFEKITGYSVSEVWGKNCRFLQGEDRDQPNLDIIRNALKNDEDCLVIIRNYRKDG 244 Query: 213 STRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLE-------EQLEHAAHHDAMTGLLN 263 + + P+ G + + I DITE+ R++ +L+H A+ D +T + N Sbjct: 245 TLFWNEVSISPVRDAGGNITHYIGIQSDITERHRMQIALEEANRKLQHLANIDGLTQIAN 304 Query: 264 RRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCA- 322 RR F E + Q +L+L D D FK ND YGH +GDE L +A+ + Sbjct: 305 RRSFDETLEQEWKRCFREQQPIALILCDVDYFKAYNDYYGHLQGDECLIQVAQAISQVIK 364 Query: 323 RKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR-----FTVSIGVA 377 R DLV R+GGEEFV++LP T A +A+ I+ + ++ + T+S+G++ Sbjct: 365 RPADLVARYGGEEFVVILPNTDGSGARQVAQLIQDQIRQLQSPHVKSDVSSYITLSLGIS 424 Query: 378 HHEGN--ESIDELFKRVDDALYRAKNDGRNRVLA 409 + S ++L D ALY+AK GR++++ Sbjct: 425 SIIPSGMTSPEQLVNAADSALYQAKQQGRDQIVV 458 Score = 42.8 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 36/113 (31%), Gaps = 4/113 (3%) Query: 26 LIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN---QHDIIEILTVQRKEE 82 +IY N A + + + + L ++N + ++ +++ Sbjct: 184 IIYVNQAFEKITGYSVSEVWGKNCRFLQGEDRDQPNLDIIRNALKNDEDCLVIIRNYRKD 243 Query: 83 ETALSCRLVLRKLTET-EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 T + + + + + + GI++ T + + +K A Sbjct: 244 GTLFWNEVSISPVRDAGGNITHYIGIQSDITERHRMQIALEEANRKLQHLANI 296 >UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 89/405 (21%), Positives = 140/405 (34%), Gaps = 18/405 (4%) Query: 17 WIVSPFEEQLI-YANSAAKLLMQDLTFSQLRTGPYSVSSQK---ELPKYLSDLQNQHDII 72 W Q+ + ++ D + + EL + Sbjct: 335 WEFDIASMQIKHWTTEVFRIHELDPPQLPSLEQAMTFYPPESRRELEATIDQATQTGMPW 394 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 ++ + + R + G T N + ++ + Sbjct: 395 DMELPFTTAKGKHIWVRTQGSAIMRDGKATSLIGAFQDITSQKTV---ENALKTREKSFN 451 Query: 133 RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHE 192 M ++ S +G+ N A N GY+ E + Q EI + Sbjct: 452 DIIEYAPIGMAIV--SLEGRFTRVNQALCNIVGYSSEELMQLTFQEITFPDDLEADLERV 509 Query: 193 ISHLPGGHKPLNFVHK--LADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQ 248 + + D VQ K ++ + DITE+K E+ Sbjct: 510 SQLIEDKISTYQTQKRYIHKDKRIVWVQLSVSISRDQDRTPKYLIAQIEDITERKYQHEE 569 Query: 249 LEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGD 308 E A+HD +T L NRR MQ + +L+ +D D FK+IND GH GD Sbjct: 570 AEQFAYHDPLTNLPNRRMLLSRLHHALMQTERFYRAMALMFLDLDHFKNINDSLGHDVGD 629 Query: 309 EVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIRVSVAKVSISGL 367 +L +A L C R D V R GG+EFV++L + A +A+ I S + + Sbjct: 630 MLLKEVANRLLKCVRSIDTVSRHGGDEFVIVLSEISHTEDAELVAQKIIASFKEPILING 689 Query: 368 PRF--TVSIGVAHHEGN--ESIDELFKRVDDALYRAKNDGRNRVL 408 + SIG+A + DEL K D A+Y AK GRNR Sbjct: 690 HEIMMSTSIGIAVSKHEKPTKADELMKHADKAMYEAKGAGRNRYC 734 Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 30/194 (15%) Query: 90 LVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQ---RKKQGFYARFF--------LTN 138 L + + + E + LG + +K Q A F L + Sbjct: 127 GTLCVIDQKARELSEEQRHSLKKLGRLVEALIEARIQYQKLQEMSAALFDKTTFLNTLLS 186 Query: 139 SAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--- 195 S +I +G I + + + GY + + T I + + HE+SH Sbjct: 187 STDESIISTDLNGLITSFSRGSESMLGYTADEVVGLKTPAIFHDVKEMHQRAHELSHILN 246 Query: 196 --------------LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 L + + + +G++ V P+ +L L + HDI Sbjct: 247 KPIETSFYVFISQALQRKSETREWTYIRKNGTSLPVSLTVTPMYDNTGELFGYLGVAHDI 306 Query: 240 TEQKRLEEQLEHAA 253 + +K+ E++ + A Sbjct: 307 SLRKQAEQETSYMA 320 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 86/406 (21%), Positives = 160/406 (39%), Gaps = 17/406 (4%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYS-VSSQKELPKYLSDLQ 66 +D + + + ++ P +++ N A + + T + + +E ++DLQ Sbjct: 287 IVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSCHRFICPNEEGRCPITDLQ 346 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 + D E ++ + + L E + + + N ++ Sbjct: 347 QELDNEERDLIRADGSRLPVIKTVSRVVLD------GREHLLESFVDISRRKQVENSLKE 400 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + Y L+I G ++ + + +G E + K + ML ++ Sbjct: 401 SEERYRMLVENQ--ADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQL 458 Query: 187 MPIM-HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQK 243 E ++ +G R + I + ++ + DIT++K Sbjct: 459 ATAAGMEQMICSDTSYYREYLSPTREGK-RWIGWALRCIFNQSGQAEAIIGMGRDITDRK 517 Query: 244 RLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYG 303 E +E A+HD +TGL NR + + + +Q ++L +D DRFK IND G Sbjct: 518 TAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLG 577 Query: 304 HSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL-SLAETIRVSVAKV 362 H+ GD++L + L C R D V R GG+EFV+L+ D A+ S+ I + + Sbjct: 578 HAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEP 637 Query: 363 SISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 + SIG++ +EL K D A+Y+AK GRN Sbjct: 638 YQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRN 683 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 14/203 (6%) Query: 59 PKYLSDLQN-QHDIIEILTVQRKEEETALSCRLVLRKLTETEP---------VIIFEGIE 108 PK + +L H +E+ S R+ L + + + Sbjct: 202 PKAIPELFPLDHLALEMGVESYIGIPLVSSRRITLGPMAVFSRRPIRETHLAASMLQVFA 261 Query: 109 APATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNH 168 A L+ ++ ++ + + +L+IDP + +IVD N A + G Sbjct: 262 VRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDP-ENHRIVDVNELAASSLGRTR 320 Query: 169 ETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 E M + ++ ADGS V + + G Sbjct: 321 EEMIGTSCHRFICPNEEGRCPITDLQQELDNE---ERDLIRADGSRLPVIKTVSRVVLDG 377 Query: 229 DKLMLCIVHDITEQKRLEEQLEH 251 + +L DI+ +K++E L+ Sbjct: 378 REHLLESFVDISRRKQVENSLKE 400 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 107/420 (25%), Positives = 164/420 (39%), Gaps = 28/420 (6%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKL--LMQDLTFS------QLRTGPYSVSSQKELP 59 + VW + + AN++ +L + + + Sbjct: 200 AIQCGQMGVWELDLVDHT---ANTSLELGHIFGYTSQESEWSFKLFLEHVLPEDRSEVSR 256 Query: 60 KYLSDLQNQHD-IIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKAS 118 + + Q D E + E ++ R V GI T A Sbjct: 257 LFHEAIARQTDWHCECRIRRTDGELRWITVRG-RHWHDSEGVVQRMIGIVQDITERKLAV 315 Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 ++ + + + S + + G+ + + + GY + K E Sbjct: 316 QAVIA---SERRFRNLVESLS--DWVWEVDEQGRYIYCSPNVRDLLGYEPAELIGKSPLE 370 Query: 179 INMLGR--RVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLC 234 + RV I K L ++ DG ++T P+ + Sbjct: 371 LMPAAEAARVAEIFGTALSERSHLKDLVNINLHKDGHEVVMETSGAPVVDADGTFRGYRG 430 Query: 235 IVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDR 294 I DIT++K LE +LE A D +TGL NRR F+ + E + +SLL++D D Sbjct: 431 IDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDH 490 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAET 354 FK ND YGH GD VL L+ R+ DL R GGEEF ++LP T D A+ +AE Sbjct: 491 FKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAER 550 Query: 355 IRVSVAKVSISGL-----PRFTVSIGVAHH-EGNESIDELFKRVDDALYRAKNDGRNRVL 408 +R+++A + FTVSIGV +D+L KR DDALY AKN GRN+V Sbjct: 551 LRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQVC 610 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 1/163 (0%) Query: 86 LSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLI 145 L RL + A L+AS +A Q +++ R L NS+ + + Sbjct: 28 LQHRLEAAQRALAGAESRCTRQAAEHRDALEASENARRQAEQELKLLRTLLDNSSDAIEV 87 Query: 146 DPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNF 205 + +D N GY+ E + H ++I+ V E + Sbjct: 88 IDPVSFRFLDVNETECRELGYSREELLSLHIFDIDPEFSEVAAKHIEEELNQVSGVRFDS 147 Query: 206 VHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQ 248 VH+ DGST V+ A ++ + CI DI+ +K LE + Sbjct: 148 VHRRKDGSTFPVEVSAKQVKT-DRPYLFCIARDISVRKLLESE 189 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 26/419 (6%) Query: 5 NFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSD 64 + + ++I P + + N A+ + P + + +L + Sbjct: 138 FERLFENSLNELYIFHPKSLKFVAVNRVARKNLGYTIEELNTMTPLDLKPEFDLESFQKL 197 Query: 65 LQ----NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L + + + TV R+++ T + L+ + + + Sbjct: 198 LNPLVSGEQEQVLFNTVHRRKDGTLYPVEINLQLFDYGGEKLCLASV----VDLTERRAM 253 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 R+K +P L+ S++ +I+ N AA + +G + WE Sbjct: 254 EEENRRKDEMLRLMLEGIPSPAWLV--SKEHRILAQNKAAASLFGTK----VGDYCWERV 307 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYA-GPIEIYGD---------- 229 + G + E G + +E G Sbjct: 308 LGGEYLSDEYREALEKNGSPLLGTKCYFCRGDEALDKNAPINSEVEFAGGIWDTWWIPLG 367 Query: 230 -KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLL 288 + L D+T K++EE+L + D++T + NRR F E + +SL+ Sbjct: 368 EDIYLHYATDVTRYKKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLV 427 Query: 289 LIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTA 348 ++D DRFK IND +GH+ GD VL ++A +++ RK D + RWGGEEFV+LLP T ++ A Sbjct: 428 MLDIDRFKSINDRFGHNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKA 487 Query: 349 LSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407 + L E +R S++++ I G+ R T S GV + ++ID L +RVD +Y AK GRN V Sbjct: 488 VVLVEELRESLSQMDIPGVGRVTASFGVVGYCPGDTIDTLMQRVDALMYEAKAAGRNCV 546 Score = 82.5 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 18/158 (11%) Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + R F + + + P + + V N A GY E + ++ Sbjct: 128 LHEANAHARMFERLFENSLNELYIFHP-KSLKFVAVNRVARKNLGYTIEELNTMTPLDLK 186 Query: 181 MLGRRV--MPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHD 238 +++ + N VH+ DG+ V+ + G+KL L V D Sbjct: 187 PEFDLESFQKLLNPLVSGEQEQVLFNTVHRRKDGTLYPVEINLQLFDYGGEKLCLASVVD 246 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM 276 +TE++ +EE+ NRR+ + Sbjct: 247 LTERRAMEEE--------------NRRK-DEMLRLMLE 269 >UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BRL9_DELAS Length = 881 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 85/403 (21%), Positives = 152/403 (37%), Gaps = 17/403 (4%) Query: 13 TSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 TS V + + N AA L+ + +++ ++ + + Sbjct: 202 TSDAVFVKDLRGRYLLVNRAAASLVGRQAEDIVGKDDFALFPFGIASA----IRRKDQAV 257 Query: 73 EILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYA 132 V EE+ + L L PV G SR +++ + A Sbjct: 258 LRQEVATHEEQLTVEPGRTLDLLVTKGPVRNTAG---HIAGLFGISRDITERKRFERELA 314 Query: 133 RF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMH 191 + + +S+ ++ +I N A GY E + K + G Sbjct: 315 QAAVVFDSSHQGIMVVDPGRRITRVNPAFTRITGYASEDVIGKTPRVL-SSGLHGPEFYR 373 Query: 192 EISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEE 247 +I G ++ G + G ++ + + DI+ K E Sbjct: 374 QIWACIERDGFWHGEIWNRRKTGEIFAEMLSISAAQGAGGEIEHYIGVFTDISHIKAHEA 433 Query: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307 +LE H+D +TGL NRR ++ + ++ +D D FK INDL+G + G Sbjct: 434 ELERVTHYDLLTGLPNRRLLIDRLNQAMLRTAREGRSLAVCFLDLDGFKEINDLHGAAAG 493 Query: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAK--VSI 364 D +L +A L+S R D + R GG+EFVLLL + ++ + + + ++ Sbjct: 494 DALLVGVAAHLKSVLRSEDTLARLGGDEFVLLLSHIGSAEHCATILDRVLEAASRPVPVQ 553 Query: 365 SGLPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 + T S+GV+ + ++ D L + D A+ AK GRNR Sbjct: 554 DRVLSVTASLGVSLYPDDQADPDLLLRHADQAMCVAKQAGRNR 596 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 4/145 (2%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + L RS ++ + + G+ + N AA + G E Sbjct: 175 SVLAETLQRSLRKANMQRQLLDSVI--SGTSDAVFVKDLRGRYLLVNRAAASLVGRQAED 232 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK 230 + K + + G + + L + G T + GP+ Sbjct: 233 IVGKDDFALFPFGIASAIRRKDQAVLRQEVATHEEQLTVEPGRTLDLLVTKGPVRNTAGH 292 Query: 231 L--MLCIVHDITEQKRLEEQLEHAA 253 + + I DITE+KR E +L AA Sbjct: 293 IAGLFGISRDITERKRFERELAQAA 317 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 13/312 (4%) Query: 107 IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGY 166 + + + + +G + + ++ ++ G I+ N + GY Sbjct: 128 RKEVEAQRDRLATLVAELERAEGELSIAAVAFASQNGMVITDPKGVILRVNQSFTRLTGY 187 Query: 167 NHETMCQKHTWEINMLGRRVMPIMHEIS--HLPGGHKPLNFVHKLADGSTRHVQTYAGPI 224 + + + GR P + + G+ +K G I Sbjct: 188 SAAEAIGRTPAVLKS-GRHDDPFYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELLTITAI 246 Query: 225 EIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA 282 G + DITE K+ E ++ A++DA+T L NRR Sbjct: 247 VASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHG 306 Query: 283 QDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR 342 +L I D FK +ND GH GD +L +A+ L + R+GD V R GG+EFVLLL Sbjct: 307 LYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFVLLLDG 366 Query: 343 TP--LDTALSLA----ETIRVSVAKVSISG--LPRFTVSIGVAHHEGNESIDELFKRVDD 394 D A ++A + +R + ++ R +SIGV+ ++++ELFKR D Sbjct: 367 VSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLFAALDTVEELFKRADL 426 Query: 395 ALYRAKNDGRNR 406 ALY+AKN GR+R Sbjct: 427 ALYQAKNAGRDR 438 >UniRef50_Q5NYX6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYX6_AZOSE Length = 927 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 152/407 (37%), Gaps = 14/407 (3%) Query: 8 TLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQN 67 +++ + +++ E +++ NSA++ ++ L Sbjct: 496 IFEIMPVGI-LLTDREGRIVECNSASERMLGIGKSQLLTQSVGDAEWDVFGADGNPMAPA 554 Query: 68 QHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKK 127 ++ L QR +++ R + T + +E P + A +R Sbjct: 555 EYAGARALAEQRPIHYSSMEVR---TPGSSTWLRVSATPLEHPLYGVVVAHIDVTDKRNT 611 Query: 128 QGFYA-RFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + A ++ +I++ N A GY + + + + G Sbjct: 612 EARLRLAASVFTHAREGIVITDAQARIIEVNDAFTAVTGYRRDEVSGQSLQVLQS-GLHP 670 Query: 187 MPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 I L GH ++ +G + + + + DIT Sbjct: 671 DEYYKAIWRALLDSGHWHGEMWNRRKNGEVYAEMLDISAVRDSRGRTQNYVALFTDITPL 730 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K ++QLE A+HD +T L NR + + Q Q ++ ID D FK +ND + Sbjct: 731 KDHQKQLERIAYHDPLTNLPNRALYADRLQQAMSQCSRRGQHVAIAYIDLDGFKAVNDNH 790 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAK 361 GH GD++L ++A L R+GD + R GG+EF +L + E + + A Sbjct: 791 GHHVGDQLLVSIALRLREVLREGDTLARLGGDEFAAVLVDLNNPADCEPVLERLIHAAAA 850 Query: 362 VSISGL--PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 G + S+GV ++ DEL + D A+YRAK G+N Sbjct: 851 PVPVGTLMLGVSASVGVTLFPHDKVDADELVRHADTAMYRAKRAGKN 897 Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 13/222 (5%) Query: 39 DLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTET 98 D+ + + P + K L + +++ EI T + + R + + T Sbjct: 404 DINSGRSLSHPDDLERSKALLERCFRRESKTYECEIRTRHKNGSWVWVLDRGRVVEWTHD 463 Query: 99 EPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANL 158 G T ++A + F P+ ++ R+G+IV+ N Sbjct: 464 GQPRRMSGTRQDITAQ---KKAAALVADDKERLHTIFEI--MPVGILLTDREGRIVECNS 518 Query: 159 AALNFYGYNHETMCQKHTWE-------INMLGRRVMPIMHEISHLPGGHKPLNFVHKLAD 211 A+ G + + + + + + + Sbjct: 519 ASERMLGIGKSQLLTQSVGDAEWDVFGADGNPMAPAEYAGARALAEQRPIHYSSMEVRTP 578 Query: 212 GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAA 253 GS+ ++ A P+E +++ D+T+++ E +L AA Sbjct: 579 GSSTWLRVSATPLEHPLYGVVVA-HIDVTDKRNTEARLRLAA 619 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 11/303 (3%) Query: 111 ATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHET 170 + ++ N R + A F + +++ RD QIVD N A GY+ Sbjct: 122 LIVRVRNLIQRNADRIQLRLAAHVFEYSGEAIMI--TDRDNQIVDVNAAFTTLTGYHKSE 179 Query: 171 MCQKHTWEINMLGRRVMPIMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYG 228 + K+ + GR + GG F + DGS + Sbjct: 180 VLSKNPKFL-SSGRTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRA 238 Query: 229 DKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYS 286 + L D++ K E ++EH AHHD +TGL NR E + +++ + Sbjct: 239 GDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLA 298 Query: 287 LLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD 346 ++ +D DRFK IND GH GD++L +A L++ R+ D+V R GG+EFV++L + Sbjct: 299 VVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMP 358 Query: 347 T-ALSLAETIRVSVAKVSISGLPRF-TV-SIGVAHHEG-NESIDELFKRVDDALYRAKND 402 + A ++AE IR+ + + G T SIG+A + G E +D+L K D A+Y K++ Sbjct: 359 SVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSE 418 Query: 403 GRN 405 G N Sbjct: 419 GGN 421 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 7/295 (2%) Query: 119 RSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWE 178 + Q+ + Y + ++ ++ + I+ N A G+ E + K T Sbjct: 189 IALEQQKINEQLYLSSKVFENSTEAIMIADANKIIISTNKALHIITGFTAEEVIGKPTSI 248 Query: 179 INMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCI 235 + + +S GH ++ G + + L Sbjct: 249 VTSIRHSTKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNISSVLSKKGSICYYLIN 308 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRF 295 +IT++K+ +E + A++D++TGL NR FY ++L ID DRF Sbjct: 309 FSNITDKKKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAARTGMLLAVLFIDLDRF 368 Query: 296 KHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDT-ALSLAET 354 K +ND +GHS GD +L A+ L C R+ D V R GG+EF ++L A + + Sbjct: 369 KEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIILNGINDQHCAERIIQM 428 Query: 355 IRVSVAKVSISGL--PRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNR 406 I + + K T SIGV + S + L K D A+Y AKN+GRN Sbjct: 429 ILLELTKPFHLNAKLAYVTASIGVTFFPADAGSAEILMKNADQAMYAAKNNGRNC 483 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 168/410 (40%), Gaps = 27/410 (6%) Query: 19 VSPFEEQLIYANSAAKLLMQDLTFSQLRTG---PYSVSSQKELPKYLSDLQNQHDIIEIL 75 V+ + N + Q + S K K + + + Sbjct: 461 VTDVTGTITDVNERFCQISQYSREELIGKNHKMLNSGWHPKGFFKAMYRAITRGQVWNDE 520 Query: 76 TVQRKEEETALSCRLVLRK-LTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARF 134 R ++ + + + + E + GI T + +SA + + Sbjct: 521 VCNRAKDGSLYWLDMTVVPFMDECGKPYKYIGIRTDIT---ERKKSAEAIERSEAKLHIL 577 Query: 135 FLTNSAPMLLIDPSRDGQIVDANLAALNFYG-YNHETMCQKHTWEINML----GRRVMPI 189 F +NS ++ G D N AAL +G E +C+ H +++ G + + Sbjct: 578 FDSNS--DAVLMLDMQG-FFDCNKAALRLFGCATTEELCKHHPADMSPATQPNGIDSLTL 634 Query: 190 MHE--ISHLPGGHKPLNFVHKLAD-GSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLE 246 +E + G+ ++HK D G + +++ G ++ V DITE+K+ E Sbjct: 635 ANEYIATATRDGNAQFEWLHKRMDSGQSFPADVLLSSMKLDGRVVLQATVRDITERKKSE 694 Query: 247 EQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSK 306 ++ A +D +TGL NRR + +L + ++L ID D FK +ND GH+ Sbjct: 695 SEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAV 754 Query: 307 GDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPL------DTALSLAETIRVSVA 360 GD +L +A+ L+ C R+ D V R GG+EFV+LL +AE I ++ Sbjct: 755 GDLLLVEVAQRLKGCVREEDTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALN 814 Query: 361 KVSISG--LPRFTVSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRNRV 407 + + SIGVA + S DEL KR D A+Y++K GRN V Sbjct: 815 LSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSKAAGRNTV 864 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 83/273 (30%), Gaps = 30/273 (10%) Query: 2 ITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKY 61 + ++L P+W++ + ++ SA + + + K+L Sbjct: 304 LVVEQEAFEIL-WPMWVMFAEQLAMLLVLSAVSIWL-----YLRLQNRAIIHPLKQLQNA 357 Query: 62 LSDLQNQHDIIEILTVQRKEEETAL-----SCRLVLRKLTETEPVIIFEGIEAPATLGLK 116 + +++ D + + ++E L L ++ + + E + L + Sbjct: 358 IEEIERTQDFTRPIEITSEDEFGELANAFNRMSHHLDRVYQNLEQRVTERTQELEILNQQ 417 Query: 117 ASRSANYQRKKQGFYARFFLTN--------------SAPMLLIDPSRDGQIVDANLAALN 162 + R+ Q A + ++ G I D N Sbjct: 418 IRANLLISRESQEKLAASEAHSKRIAEELQYQKFALDEHAIVSVTDVTGTITDVNERFCQ 477 Query: 163 FYGYNHETMCQKHTWEINMLGRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTY 220 Y+ E + K+ +N G + G ++ DGS + Sbjct: 478 ISQYSREELIGKNHKMLNS-GWHPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMT 536 Query: 221 AGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 P K + I DITE+K+ E +E Sbjct: 537 VVPFMDECGKPYKYIGIRTDITERKKSAEAIER 569 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 90/400 (22%), Positives = 147/400 (36%), Gaps = 23/400 (5%) Query: 31 SAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV---------QRKE 81 A L SS+ +L +S + T+ R Sbjct: 241 PAGLYLSIYDGTQPSAESLLYRSSEPKLRDVVSANEYLVVGGHDWTLSMTAQPDFKARFG 300 Query: 82 EETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAP 141 L L+ ++ + + AS+ R+ + + + Sbjct: 301 HNAKLLIACTGAGLSLLLALLAWSLASGRSRAMRLASKMTAEVRESEAELRIAAVAFDSL 360 Query: 142 MLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL--PGG 199 ++ DG I+ N A GY + + ++ + GR ++ G Sbjct: 361 EGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPR-LLSSGRHDAAFFRDMWETIHRVG 419 Query: 200 HKPLNFVHKLADGSTRHVQTYAGPIE--IYGDKLMLCIVHDITEQKRLEEQLEHAAHHDA 257 + +G ++ + +DITE+K EEQ++ A DA Sbjct: 420 GWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVGTHYDITERKLAEEQIKELAFFDA 479 Query: 258 MTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALART 317 +T L NR + +LL +D D FK +ND GH KGD +L +A Sbjct: 480 LTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDNFKTLNDTLGHDKGDLLLGQVAVR 539 Query: 318 LESCARKGDLVFRWGGEEFVLLLPRTP--LDTALS----LAETIRVSVAKVSI--SGLPR 369 L R+GD V R GG+EFV++L D A S AE + ++++ R Sbjct: 540 LLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASETEGAAEKVLTALSRPYYLAGTEFR 599 Query: 370 FTVSIGVAHHEGNES-IDELFKRVDDALYRAKNDGRNRVL 408 T SIG G+E+ IDEL K+ D A+Y++K GRN + Sbjct: 600 TTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRNAIC 639 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 160/409 (39%), Gaps = 17/409 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYL 62 + +PV I+ + +AN AA ++ + L G + Sbjct: 6 IPYKQVFSAIPAPV-IMLDTQGHFAFANKAAYQIL--PSCIPLDDGVSCTPPDWLATEID 62 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 + L + + + R + LT + GI + R+ Sbjct: 63 TFLYHAKEEHTFEHCLPLDTGH----RHIQFTLTRLDQDKRQNGILITLHDISRHKRAEQ 118 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKH-TWEINM 181 R + Y S L++ +G++ A+ + +G + E + + IN Sbjct: 119 ALRLSEERYRMLVEHQS--DLVVRVDIEGRLQFASPSFCMLFGIDEEQLVGRELCPIINS 176 Query: 182 LGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDI 239 G+ VM + + DG R + + + ++ I DI Sbjct: 177 SGQAVMKEAMQRLDCHPKSCYHEICSQTLDG-LRWIGWAMKGVVDEKGHIEAIVGIGRDI 235 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 T++K+ E+++ AH+D +TGL NR ++L +D DRFKH+N Sbjct: 236 TDRKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANRGNVTLAVLFLDLDRFKHVN 295 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVS 358 D +GH GD +L ++R L+ C R D V R GG+EFV++L A S+A I S Sbjct: 296 DAFGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIILTNLIKCSQAGSIAAKIISS 355 Query: 359 VAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 ++++ G SIG+A + +D L K D A+Y+AK GR Sbjct: 356 MSRLFQLGGHELYSGTSIGIALYPTDGNDVDTLLKHADMAMYQAKASGR 404 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 13/344 (3%) Query: 73 EILTVQRKEEETALSCRLV---LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQG 129 EI + + A S + + L + + E L + +++++ Sbjct: 583 EIGILANAFNQMAHSLKGYMDTVMTLNASLEKKVQERTSELLLLNQTIQEQLDIKKEQEE 642 Query: 130 FYARFF-LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP 188 F + ++ + + +G ++ N A Y + + + + Sbjct: 643 KLEIFAKIFSNTIEGIAITNLEGIVLQINDAFSAMTHYAPHEVLGQDIRLLRSY-KHPDS 701 Query: 189 IMHEISHL--PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKR 244 + EI +K DG+ PI + ++ I HDI+ K Sbjct: 702 LYKEIWDTVFSNTAWQGELWNKRKDGTLYPALLIIHPILNREGHISYIVFIQHDISVLKH 761 Query: 245 LEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGH 304 EE+L A++D +T L NR Y + + + S+L +D D+FK+IND GH Sbjct: 762 NEEKLHQQAYYDPLTKLANRTLAYDRLQHAITNAKSRRRLVSVLFLDLDKFKNINDTLGH 821 Query: 305 SKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPR-TPLDTALSLAETIRVSVAKVS 363 GD +L +A+ +++ + D V R GG+EF+++L T +TA+S+A+ I ++++ Sbjct: 822 DIGDLLLIEVAKRIQALCSQSDTVCRLGGDEFLVILEDITHYETAISVAKGIIAALSQPF 881 Query: 364 ISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGR 404 + SIG+ ++ +++ L K D A+YR+K +GR Sbjct: 882 YLEGRTISTSTSIGITYYPNDGDTMKTLLKNADIAMYRSKTNGR 925 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 145/411 (35%), Gaps = 25/411 (6%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKL-LMQDLTFSQLRTGPYSVSSQKELPKYL 62 + +V + + N A+ L DL L P L Sbjct: 77 QEIRAIFDSMDAAVVVVNHDGSIDDCNRQAREWLFGDLDAQMLIGRP------------L 124 Query: 63 SDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSAN 122 ++L I+ + + + ++ ++ + + ++ Sbjct: 125 AELCPCDREIQQQVMSGRGRGQTIEVDGRHLQIIVSDITDAHQNSIKKVVICFDVTQQ-K 183 Query: 123 YQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 G Y + F + + + + + + N A GY+ + + + Sbjct: 184 KTEASLGLYGKVFESTAEGIAI--TDSRMRFLQVNEAYCRITGYSDGELLGRTPRMLKS- 240 Query: 183 GRRVMPIMHEISHLP--GGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHD 238 G +IS GH + + DG + + + IV D Sbjct: 241 GHHDAAFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTD 300 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHI 298 I+ K + +L+ AHHD +T L NR F E + + LL ID DRFK I Sbjct: 301 ISSIKETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTI 360 Query: 299 NDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRV 357 ND GH GD +L +AR L RK D + R GG+EFV+L+ A LAE + Sbjct: 361 NDSLGHQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVH 420 Query: 358 SVAKVSI--SGLPRFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ + SIG+ + E L K D A+YR K+ GR+ Sbjct: 421 AMRQPFFLEETELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRD 471 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 19/162 (11%) Query: 92 LRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDG 151 + I+ + + ++ + R++ F +S ++ + DG Sbjct: 43 RTLIDLDPIGIVSDAFGQILSHLHDTNQKLDVARQE---IRAIF--DSMDAAVVVVNHDG 97 Query: 152 QIVDANLAALN-FYG-YNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKL 209 I D N A +G + + + + E+ R I ++ G + + + Sbjct: 98 SIDDCNRQAREWLFGDLDAQMLIGRPLAELCPCDR---EIQQQVMSGRGRGQTIEVDGRH 154 Query: 210 ADGSTRHVQTYAGPIEIYGDKLM--LCIVHDITEQKRLEEQL 249 +Q I + + I D+T+QK+ E L Sbjct: 155 -------LQIIVSDITDAHQNSIKKVVICFDVTQQKKTEASL 189 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 77/411 (18%), Positives = 155/411 (37%), Gaps = 21/411 (5%) Query: 7 NTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQ 66 T + ++ + E + + +++ + + + E + ++ Sbjct: 215 ATFSAIPDLLFEMDI-EGRYLACHASDPDDLVAKPEELIGKSVFDFIPLDEAQIIVEAIR 273 Query: 67 NQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRK 126 ++ + + + T R + E E + SR +++ Sbjct: 274 ----EADLKGISKGRQVTLQVGRGLREFELSVSRKHDDESSEHHFIV---LSRDITERKR 326 Query: 127 KQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRV 186 + + ++ + +I+ N A GY E + G+ Sbjct: 327 HERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFLQS-GKHS 385 Query: 187 MPIMHEI--SHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQ 242 + S + ++ G ++ ++ + DIT++ Sbjct: 386 EDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDITQR 445 Query: 243 KRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLY 302 K+ E + A +D++TGL NRR + Q ++ ID D FK++ND Sbjct: 446 KQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNLNDTA 505 Query: 303 GHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAE------TIR 356 GH +GD++L +A L SC R D+V R GG+EF+++L +D + LA+ + Sbjct: 506 GHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDESNVLAQVKDIVAKVI 565 Query: 357 VSVAKVSISGL--PRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRN 405 +++ G T SIG+A + DE+ KR D A+Y+AK+ G+N Sbjct: 566 LTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQAKSSGKN 616 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 329 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 85/299 (28%), Positives = 131/299 (43%), Gaps = 7/299 (2%) Query: 112 TLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETM 171 + + R + Y + F T+ + + DG VD N G+ H+ + Sbjct: 470 ADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRL-VDGLYVDVNTGFERITGWRHDEV 528 Query: 172 CQKHTWEINMLGRRVMPIMHEISHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGD 229 K E+N+ G M + L + L +G H A + Sbjct: 529 VGKTATELNLWG-NPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDV 587 Query: 230 KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLL 289 +L I DITE+K E Q++ AH D +TGL NR Q + +++ Sbjct: 588 DCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMF 647 Query: 290 IDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTAL 349 +D D FK+IND GHS GD++L ++R L++ R+ D + R GG+EF+LLLP T A Sbjct: 648 LDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQAS 707 Query: 350 SLAETIRVSVAKVSISGLPRF--TVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRN 405 +A + +VA+ TVSIG+A + + + L K D A+YR K RN Sbjct: 708 QVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRN 766 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 20/161 (12%) Query: 105 EGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 L + + A ++ P LL + DG+ + Y Sbjct: 164 AARVRANELQVDVNAQAVELVALNQRLQSTL--DALPDLLFETDMDGRYLA--------Y 213 Query: 165 GYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPL-NFVHKLADGSTRHVQTYAG- 222 + K + + + + G+ L DG + A Sbjct: 214 HSPRSELLGKTLHRVLPVAVADICLAAVHEANAVGYSHGKQIQLALPDG-AHWFELSASR 272 Query: 223 -PIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLL 262 P + + DITE+K+ E ++E +T L Sbjct: 273 KPGLPGDAPTFIVLSRDITERKKAEIKIER------LTKLY 307 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 87/395 (22%), Positives = 148/395 (37%), Gaps = 13/395 (3%) Query: 18 IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTV 77 +V + I N A + + + + ++ + V Sbjct: 301 VVLDPQFNFIRVNPAYARACRRDVAEFEGRNHFELYPSDARFIFEEVVRTRRPF---EAV 357 Query: 78 QRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLT 137 R R V PV+ +G L + F Sbjct: 358 ARPFTFPDQPERGVTYWDWNLVPVLDGKGEVEYLLFSLVDVTDRQKATAQLRLIETAF-- 415 Query: 138 NSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHL- 196 ++ +I+ N A GY+ + + + GR Sbjct: 416 QHTRDAVLITDARARILRVNPAFETITGYSAGEVVGRTPRMLQS-GRHDGAFYRRFWRAL 474 Query: 197 -PGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAA 253 GH ++ DG ++ + I DI+E KR E Q+ + + Sbjct: 475 ETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLS 534 Query: 254 HHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCA 313 +HD +TGL NR F + + +L+++D DRFK IND GHS GDE+LC Sbjct: 535 YHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQ 594 Query: 314 LARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPR--FT 371 +A ++ C +GD V R GG+EFV++L + A +A + ++AK +++G T Sbjct: 595 VAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVT 654 Query: 372 VSIGVAHHEGNE-SIDELFKRVDDALYRAKNDGRN 405 S+G++ + + + L K D A+Y AK+ GRN Sbjct: 655 PSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRN 689 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 71/243 (29%), Gaps = 17/243 (6%) Query: 17 WIVSPFEEQLIYANSAAKLLMQD----LTFSQLRTGPYSVSSQKELPKYLSDLQNQHDII 72 W + + +L +++ ++ D + ++ + Sbjct: 51 WELDLVQGRLEWSDQVFRIFEIDPERFEASYEAFLALVHPDDRERVDAAYRRSIADRGSY 110 Query: 73 EILTVQRKEEETALSCRLVL-RKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFY 131 EI+ + R +E + G T + ++ + Sbjct: 111 EIVHRLLMPDGRVKHVRERCQTFYSEDGRPLRSVGTVWDVTSFHET---------EEKLH 161 Query: 132 ARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMP-IM 190 + S +I G+I N A +GY E + + + L ++ P + Sbjct: 162 RLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIGQPVTVLPPLAKQGEPGQI 221 Query: 191 HEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQ 248 DG + P+ ++L + I+ DITE +RL+ Sbjct: 222 LRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKAT 281 Query: 249 LEH 251 L+ Sbjct: 282 LQE 284 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 12/255 (4%) Query: 3 THNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT---GPYSVSSQKELP 59 H + T IVS + ++ N A+ + + ++ Q E Sbjct: 160 LHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIGQPVTVLPPLAKQGEPG 219 Query: 60 KYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASR 119 + L + ++H+++ + ++ L + L + E G+ A + R Sbjct: 220 QILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAEN--RLTGVSAIIRDITEMER 277 Query: 120 SANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEI 179 +++ F + + L+ + N A + ++ +E+ Sbjct: 278 LKATLQERLKLVEMVFQYSVS--CLVVLDPQFNFIRVNPAYARACRRDVAEFEGRNHFEL 335 Query: 180 NMLGRR--VMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVH 237 R ++ +P F + G T P+ ++ + Sbjct: 336 YPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYW-DWNLVPVLDGKGEVEYLLFS 394 Query: 238 --DITEQKRLEEQLE 250 D+T++++ QL Sbjct: 395 LVDVTDRQKATAQLR 409 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 7/157 (4%) Query: 102 IIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAAL 161 + F I L LK R+ R+ + +D G+ ++ + Sbjct: 10 VAFVPIALAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDL-VQGR-LEWSDQVF 67 Query: 162 NFYGYNHETMCQKHTWEI-NMLGRRVMPIMHEISHLPGGHKPLNFVHKL--ADGSTRHVQ 218 + + E + + + + VH+L DG +HV+ Sbjct: 68 RIFEIDPERFEASYEAFLALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVR 127 Query: 219 TYAGPIEIYGDKLM--LCIVHDITEQKRLEEQLEHAA 253 + + + V D+T EE+L A Sbjct: 128 ERCQTFYSEDGRPLRSVGTVWDVTSFHETEEKLHRLA 164 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 101/382 (26%), Positives = 162/382 (42%), Gaps = 39/382 (10%) Query: 34 KLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLR 93 ++ DL+ GP + K L L L Q ++ ++ E Sbjct: 53 RICQGDLSHPIHEQGPLAGCR-KSLQARLRHLTWQVQMVAAGDFSQRGESLG-------- 103 Query: 94 KLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQI 153 E A + +R+ ++ + Y L +++ +G+ Sbjct: 104 -----------EFSTAFNEMTEALARARAELQRSEARYR--LLAEHVADVIVTLDGEGRF 150 Query: 154 VDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGS 213 + + +A GY + + + +I P + + DG+ Sbjct: 151 LYVSPSAQALLGYAPDELAGRPLCDITPSAEAPRP-----------GTVVELTVRCRDGT 199 Query: 214 TRHVQTYAGPIEIY--GDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHIT 271 TR + + +++C+ DI+ +KRLE L+H A D +TG NRR F + Sbjct: 200 TRWAEVNTAALPPGAGDGAVLVCVFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVC 259 Query: 272 EPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRW 331 + A+ SLLL+D D FK +ND +GH+ GDEVL + T R D+V R Sbjct: 260 GQELQRADRRARPTSLLLMDIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRI 319 Query: 332 GGEEFVLLLPRTPLDTALSLAETIR---VSVAKVSISGLPRFTVSIGVAHHEGN-ESIDE 387 GG+EF +LLP T L+ A +AE +R +A + G FTVS GVA + + +++E Sbjct: 320 GGDEFAVLLPATTLEQAGRVAEQLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEE 379 Query: 388 LFKRVDDALYRAKNDGRNRVLA 409 L +R D ALY AKN GRN V Sbjct: 380 LLQRADRALYAAKNAGRNCVRT 401 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 101/414 (24%), Positives = 172/414 (41%), Gaps = 19/414 (4%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRT-----GPYSVSSQKEL 58 + + ++ +P + + N + + +++R + Sbjct: 146 KYRSIFENAVEGIFQTTPA-GRYLEVNRTLARIYGFESVAEMREFFRDIRNQLYVDPRRR 204 Query: 59 PKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLT-ETEPVIIFEGIEAPATLGLKA 117 ++ +L + + + RK++ T + R + +EG T Sbjct: 205 DDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYEGTVVDIT---DR 261 Query: 118 SRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTW 177 R+ ++ ++ + F + + LID R+ IVDAN A +GY + Sbjct: 262 KRAEAALATQRAYFTQLFANSPQAIALIDMHRN--IVDANKAFEALFGYRTADIQGFGMR 319 Query: 178 EINMLGRRVMPIMH-EISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGD-KLMLCI 235 + + + + L G V + DG V PIEI G+ + ++ I Sbjct: 320 AFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGETQGIVYI 379 Query: 236 VHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIA-QDYSLLLIDTDR 294 DI+E+K EEQ+ H A HDA+TGL NR F E + Y++L+ID ++ Sbjct: 380 YQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNK 439 Query: 295 FKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAE 353 FK +ND GH GD++L +AR L C R D V R GG+EF ++L +++ E Sbjct: 440 FKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVE 499 Query: 354 TIRVSVAKVSISGLPRFT--VSIGVAHH-EGNESIDELFKRVDDALYRAKNDGR 404 I V + K + T SIG+ H + D+L + D A+YRAK GR Sbjct: 500 RIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGR 553 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 83/313 (26%), Gaps = 45/313 (14%) Query: 1 MITHNFNTLDLLTSPVW-----------IVSPFEEQLIYANSAAKLLMQDLTFSQLRTGP 49 M T L + ++ + ++ AN+A + L + Sbjct: 1 MTLQFPGTFPELPDDAFRRVFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDL 60 Query: 50 YS-VSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEG-- 106 + P ++ + E + + ++ + G Sbjct: 61 REVLRPVSSRPGRADRPDEDGEVWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDR 120 Query: 107 --IEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFY 164 + + R + Y F + + G+ ++ N Y Sbjct: 121 PITCMLFRDIASRLLAEDRLRDAERKYRSIFENAVEG--IFQTTPAGRYLEVNRTLARIY 178 Query: 165 GY-NHETMCQ--KHTW-EINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTY 220 G+ + M + + ++ + RR + E++ + + DG+ + Sbjct: 179 GFESVAEMREFFRDIRNQLYVDPRRRDDFVRELAA-HDQVRDFESEIRKKDGTVIWISEN 237 Query: 221 AGPIEIYGD--KLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQH 278 A + V DIT++KR E L R F + Sbjct: 238 ARVVRGADGLPAYYEGTVVDITDRKRAEAALATQ-----------RAYFTQLFA------ 280 Query: 279 LAIAQDYSLLLID 291 ++ LID Sbjct: 281 ---NSPQAIALID 290 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 95/417 (22%), Positives = 159/417 (38%), Gaps = 21/417 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 L + PV++ + + N A + L+ S L Y K+L + Sbjct: 277 RLQALLSAIPDPVFVKN-ANGVFMSCNKAFERLLGAPEKSILGKTDYDFFD-KDLADFFR 334 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 + EE + T+ + +G +A TLG+ + Sbjct: 335 E--KDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDG-QAIGTLGIAHDITRRK 391 Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + + A + ML+ +G I+ N A L GY E + + G Sbjct: 392 RIEADLRLAAAAFESQTAMLV--TDANGVILRVNQAFLRDTGYAVEECVGQTPRILRS-G 448 Query: 184 RRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDI 239 R ++ G + DGS + + + + D+ Sbjct: 449 RHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDV 508 Query: 240 TEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIN 299 +E+K E ++ A++D +TGL NR + A + LL +D D FK +N Sbjct: 509 SERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFKTLN 568 Query: 300 DLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLD------TALSLAE 353 D GH+ GD +L + L C+R+ D V R GG+EF +++ D A + A Sbjct: 569 DTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQGAEAAAR 628 Query: 354 TIRVSVAKVSISGL--PRFTVSIGVAHHEGN-ESIDELFKRVDDALYRAKNDGRNRV 407 + + + G R TVSIG +G ESI+ L +++D A+Y+AK GRN V Sbjct: 629 YLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGRNTV 685 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 3/133 (2%) Query: 124 QRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLG 183 + K L ++ P + + +G + N A G +++ K ++ Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKD 328 Query: 184 RRVMPIMHEISHLPGGHK--PLNFVHKLADGSTRHVQTYAGPIEIYGDKL-MLCIVHDIT 240 + + G ++ ADG + +T P+ + G + L I HDIT Sbjct: 329 LADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDIT 388 Query: 241 EQKRLEEQLEHAA 253 +KR+E L AA Sbjct: 389 RRKRIEADLRLAA 401 >UniRef50_Q483T7 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483T7_COLP3 Length = 654 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 86/414 (20%), Positives = 146/414 (35%), Gaps = 22/414 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLS 63 F + TS +++ + + ++N+A L + + + Sbjct: 230 QKFRSFIETTSEGFLILTPQLDINFSNTAICQLAGYSLTEMQGKSVLVFVTSESRKQLRQ 289 Query: 64 DLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANY 123 L I+ E T + + V+ A Sbjct: 290 QL-----IMARSHSHLAAELTLMHKNGHHVFIRYKATVM------ADGNGFFTYITDITE 338 Query: 124 QRKKQGFYARF-FLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINML 182 ++ K+ + +I ++G I N GY+ + + + + Sbjct: 339 RKLKEVELRTLNSAVKHSASSIIITDKNGIIEYVNPRFCVVTGYSEQEVIGQTPS-LIST 397 Query: 183 GRRVMPIMHEISH--LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHD 238 + + E+ L G + +G PI ++ + + D Sbjct: 398 AKTRTELHTELWKTILAGDDWHGETYNCTKNGEFYWSMMSISPIRNENGEISQFVSVSQD 457 Query: 239 ITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQ-HLAIAQDYSLLLIDTDRFKH 297 ITE K ++E A D +TGL NRR F ++++D D FK Sbjct: 458 ITEHKSKHLKMEELALRDPLTGLANRRLFDDRLNQAIQIISYQNRNGIGIIMLDLDHFKD 517 Query: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTP-LDTALSLAETIR 356 IND YGH GD +L +AR L RK D V R+GG+EF++LL + A +A I Sbjct: 518 INDTYGHDVGDLILKEVARKLLLSTRKEDTVSRFGGDEFIILLQDVSKVSDAQRVAANIL 577 Query: 357 VSVAKVSISGLP--RFTVSIGVAHHE-GNESIDELFKRVDDALYRAKNDGRNRV 407 ++++ G T S+GV +L K D ALY+AK GRN + Sbjct: 578 KTLSEPIDVGEHTFSITCSLGVCLAPQDGCIPTQLLKAADLALYQAKIAGRNNI 631 Score = 100 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 74/252 (29%), Gaps = 13/252 (5%) Query: 4 HNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQD---LTFSQLRTGPYSVSSQKELPK 60 + D + ++ P +++I AN AA++ + + +S K + Sbjct: 108 KYYQLFDKNKAIELLIDPNTQKIIKANGAAEIFYGYNEQEFKNLSISDINILSVDKIEAE 167 Query: 61 YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS 120 L + D + E + + + + I T ++ Sbjct: 168 IELALTEKRDYFNFRHQLKNGEIKDVCVYSGPIIMAGRK---VLYSIIHDIT---DQRQA 221 Query: 121 ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN 180 + + + F T S L++ P D I +N A GY+ M K Sbjct: 222 EKALLESEQKFRSFIETTSEGFLILTPQLD--INFSNTAICQLAGYSLTEMQGKSVLVFV 279 Query: 181 MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT 240 R I H +G ++ A + + DIT Sbjct: 280 TSESRKQLRQQLIMARSHSHLAAELTLMHKNGHHVFIRYKATVMADGNG--FFTYITDIT 337 Query: 241 EQKRLEEQLEHA 252 E+K E +L Sbjct: 338 ERKLKEVELRTL 349 Score = 91.0 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 6/196 (3%) Query: 55 QKELPKYLSDLQNQHDIIEILTVQRKEEETALSC-RLVLRKLTETEPVIIFEGIEAPATL 113 + + + ++ L+N E + + K +T + +G T Sbjct: 35 DRIVKEMVAFLKNDIVYFEQDYRIFTKGGDIRWVYEKTILKTDDTGLPTLAKGYLLDITE 94 Query: 114 GLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQ 173 + R+ Y + F N A LLIDP+ +I+ AN AA FYGYN + Sbjct: 95 RKL---AEQQLRESSEKYYQLFDKNKAIELLIDPNTQ-KIIKANGAAEIFYGYNEQEFKN 150 Query: 174 KHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLML 233 +IN+L + E++ L NF H+L +G + V Y+GPI + G K++ Sbjct: 151 LSISDINILSVDKIEAEIELA-LTEKRDYFNFRHQLKNGEIKDVCVYSGPIIMAGRKVLY 209 Query: 234 CIVHDITEQKRLEEQL 249 I+HDIT+Q++ E+ L Sbjct: 210 SIIHDITDQRQAEKAL 225 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 6/94 (6%) Query: 164 YGYNHETMCQK--HTWEINMLGRRVMPIMHEISHLPGGHKPLN--FVHKLADGSTRHVQT 219 +GY K +I + ++ L + G R V Sbjct: 11 FGYEPAEFLSKKLTFTDIVHPEDLDRIVKEMVAFLKNDIVYFEQDYRIFTKGGDIRWVYE 70 Query: 220 YAGPIEIYGD--KLMLCIVHDITEQKRLEEQLEH 251 L + DITE+K E+QL Sbjct: 71 KTILKTDDTGLPTLAKGYLLDITERKLAEQQLRE 104 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 9/279 (3%) Query: 136 LTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH 195 + +++ ++ IV N A + GY+ + + + GR+ ++ Sbjct: 505 IFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS-LLSSGRQPPAFYQKMWQ 563 Query: 196 --LPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDK--LMLCIVHDITEQKRLEEQLEH 251 GH ++ DG+ + + + + DI+E+K E + H Sbjct: 564 QLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRH 623 Query: 252 AAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVL 311 A HD +T L NR + ++L +D D FK+IND GH+ GDE+L Sbjct: 624 MAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELL 683 Query: 312 CALARTLESCARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGL--P 368 +A+ L+ R D V R GG+EFVL++P A LA+ + + + Sbjct: 684 KQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQAL 743 Query: 369 RFTVSIGVAHHEG-NESIDELFKRVDDALYRAKNDGRNR 406 + SIG++ + EL D A+Y AK GRNR Sbjct: 744 AISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNR 782 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 131/328 (39%), Gaps = 9/328 (2%) Query: 87 SCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLID 146 + + + +K Y R +S +++ Sbjct: 293 RLDDEPFSEEDEWLCSSHAAMAGRVYENRSLYLQLESRARKLQLYDRAIEESSNGIVICL 352 Query: 147 PS--RDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLP-GGHKPL 203 RD ++ AN A GY+H+ + + + + + GG Sbjct: 353 ADKTRDNPVIYANRAFSIMTGYSHDEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARA 412 Query: 204 NFVHKLADGSTRHVQTYAGPIEIYGDKL--MLCIVHDITEQKRLEEQLEHAAHHDAMTGL 261 + DGS + + ++ + + +D+T++KR E LE+ A+HD +TGL Sbjct: 413 ILRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGL 472 Query: 262 LNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESC 321 NR E + ++LL+D D+FK +ND GH GD ++ +A + C Sbjct: 473 PNRNLLRDRLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQC 532 Query: 322 ARKGDLVFRWGGEEFVLLLPRT-PLDTALSLAETIRVSVAKVSISGLPRF--TVSIGVAH 378 R D V R GG+EF++L A +LA+ + + + SIG+A Sbjct: 533 VRDSDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAM 592 Query: 379 HE-GNESIDELFKRVDDALYRAKNDGRN 405 ++ DELF+ D A+YRAK+ GRN Sbjct: 593 FPKDGDNGDELFRNADTAMYRAKDVGRN 620 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.167 0.550 Lambda K H 0.267 0.0511 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,790,810,958 Number of Sequences: 3077464 Number of extensions: 167836054 Number of successful extensions: 556772 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 30138 Number of HSP's successfully gapped in prelim test: 11371 Number of HSP's that attempted gapping in prelim test: 413725 Number of HSP's gapped (non-prelim): 67857 length of query: 410 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 279 effective length of database: 637,248,572 effective search space: 177792351588 effective search space used: 177792351588 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (40.9 bits)