67 c3hrpA_ Probab=99.63   E-value=2.8e-11  Score=77.22  Aligned_columns=247  Identities=12%

Q ss_pred             CCCEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCEEEE
Q ss_conf             87449999688888999706870588741666268899981675554202047740489807997157643057520799
Q batch____        89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV  168 (353)
Q Consensus        89 ~~p~~ia~~~dg~~l~v~~~~~~~v~~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (353)
                      ..|.+|+++++++ +|+++..++.+.++|.++..+......................++.......++........... 
T Consensus       122 ~~p~~iavd~dg~-i~v~d~~n~~Ir~~d~~~~~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  199 (400)
T c3hrpA_         122 KYXWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYXKASGWAPT-  199 (400)
T ss_dssp             CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE-
T ss_pred             CCCEEEEEECCCC-EEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEE-
T ss_conf             6503689918998-99987799869999899998999952644776510204884489997589729999268825882-


Q ss_pred             EECCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEE--EEECCCCCEEE
Q ss_conf             8167741776630255440235434764145762266302445758984767887246677521455--77658750799
Q batch____       169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFIN--ISLDTARQRAF  246 (353)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  246 (353)
                            ............+..+..++....++....+..+..++..+....................  ....+....+|
T Consensus       200 ------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (400)
T c3hrpA_         200 ------RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY  273 (400)
T ss_dssp             ------EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred             ------EECCCEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEECCCCEEEECCCCCEEE
T ss_conf             ------00331022026514999869986899962698499970688638997512455401210342035405664047


Q ss_pred             EEEECCCCEEEEECCCCEEEEEEECCC---------------CEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEE
Q ss_conf             863057402334527980899985188---------------31278955898899996679869999999982999995
Q batch____       247 ITDSKAAEVLVVDTRNGNILAKVAAPE---------------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD  311 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~g~~lyv~~~~~~~v~v~D~~t~~~~~~i~  311 (353)
                      ........+..++..............               |..++++++|+.+++...++++|..||.+++.+..-.-
T Consensus       274 ~~~~~~~~i~~~~~~g~~~~~~g~~~~~~~~dg~~~~~~~~~p~gi~~d~~g~iyv~d~~~n~~Ir~id~~~g~v~t~aG  353 (400)
T c3hrpA_         274 XSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGXTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAG  353 (400)
T ss_dssp             EEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred             EEECCCCCEEEECCCCCEEEECCCCCEECCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEE
T ss_conf             66379971899915871999337631121687422202451430014657986899984999889999899888999984


Q ss_pred             CCCC---------------CEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf             7997---------------20899928999899997578875510479
Q batch____       312 TPTH---------------PNSLALSADGKTLYVSVKQKSTKQQEATQ  344 (353)
Q Consensus       312 ~g~~---------------p~~ia~spdG~~lyVs~~~~~~~~~~~~~  344 (353)
                      .+..               |.+|+++++| .|||+....+..-+..-+
T Consensus       354 ~g~~~g~~dg~~~~a~f~~P~gia~~~~g-~iyv~D~~N~~IRkit~e  400 (400)
T c3hrpA_         354 QVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAVE  400 (400)
T ss_dssp             CTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEEC
T ss_pred             CCCCCCCCCCCCCCEEECCCEEEEECCCC-CEEEEECCCCEEEEEEEC
T ss_conf             58758867776212464680599988998-799997899869999969