 |
| Job Description | P33667 | | Confidence | 89.18% | Date | Thu Jan 5 11:52:34 GMT 2012 |
| Rank | 323 | Aligned Residues | 27 |
| % Identity | 22% | Template | c2eyqA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:transcription-repair coupling factor; |
PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor
|
| Resolution | 3.20 Å |
|
|   |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | T | A | I | Q | A | T | I | E | L | A | Q | K | P | I | . |
V | L | I | G | G | C | T | G | S | G | K | T | L | L |
| Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . |   |
|
|   |
|   |
|
|   |
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |   |   |   | . | . |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
| Template Sequence |   |
N | A | V | L | S | D | M | C | Q | . |
. |
P | L | A | M | D | R | L | V | C | G | D | V | G | F | G | K | T | E | V |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | . | . | S | S |
|
|  |  |  |  |  |
|
|
|
| T | T | T |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
610 | . | . | . | . | . | . | . | . | |
|
. | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|