 |
| Job Description | P77510 | | Confidence | 50.15% | Date | Thu Jan 5 12:30:10 GMT 2012 |
| Rank | 119 | Aligned Residues | 43 |
| % Identity | 19% | Template | c3rtyA_ |
| PDB info |
PDB header:circadian clock protein | Chain: A: PDB Molecule:period circadian protein; |
PDBTitle: structure of an enclosed dimer formed by the drosophila period protein
|
| Resolution | 2.85 Å |
|
|   |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | L | I | A | V | D | P | H | G | Y | I | T | A | I | N | R | N | A | R | K | M | L | G | L | S | S | P | G | R | Q | W | L | G | K | P | I | V | E | V | V | R | P | A | D | F |
| Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |   |
| . | . |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
| Template Sequence |   |
C | C | V | I | S | M | H | D | G | I | V | L | Y | T | T | P | S | I | T | D | V | L | G | Y | P | R | D | . |
. |
M | W | L | G | R | S | F | I | D | F | V | H | L | K | D | R |
| Template Known Secondary structure |   |
 |  |  |  |  | T | T | T |
| B |  |  |  |  |
| T | T |  |  |  |  |  |
|
|
| T | T | . | . | S | S | T | T | S | B | G | G | G | G | B |
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  | . | . |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | |
|
. | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|