BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (285 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 593 e-168 UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organis... 500 e-140 UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans... 359 5e-98 UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str.... 304 2e-81 UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholera... 295 1e-78 UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax... 279 7e-74 UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organism... 276 6e-73 UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible... 276 9e-73 UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Ta... 274 3e-72 UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2V... 270 4e-71 UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4... 268 1e-70 UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=... 265 1e-69 UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (... 260 5e-68 UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-rep... 257 4e-67 UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=S... 253 7e-66 UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples Re... 249 8e-65 UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putat... 248 2e-64 UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID... 245 1e-63 UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold... 241 3e-62 UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5... 239 6e-62 UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20... 237 4e-61 UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblasti... 236 6e-61 UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon... 231 3e-59 UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=... 229 1e-58 UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofu... 227 4e-58 UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepI... 225 1e-57 UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 223 6e-57 UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon... 220 4e-56 UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospi... 220 5e-56 UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales Re... 219 6e-56 UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellula... 215 2e-54 UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=... 214 3e-54 UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Plancto... 213 7e-54 UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 ... 211 2e-53 UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatron... 211 3e-53 UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula sta... 208 1e-52 UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterin... 204 4e-51 UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 R... 199 7e-50 UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus... 199 8e-50 UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacteri... 198 2e-49 UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce ... 194 4e-48 UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosp... 192 1e-47 UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental... 191 2e-47 UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota R... 191 2e-47 UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae R... 191 3e-47 UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH 187 3e-46 UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio de... 187 4e-46 UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Ku... 184 3e-45 UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Euroti... 181 2e-44 UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma Rep... 181 3e-44 UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca ... 177 3e-43 UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ell... 177 4e-43 UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix ... 177 4e-43 UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae R... 177 5e-43 UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=EN... 172 1e-41 UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organi... 172 1e-41 UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vu... 170 5e-41 UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 170 6e-41 UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infern... 169 7e-41 UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae Rep... 169 1e-40 UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acida... 167 3e-40 UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=E... 165 2e-39 UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 ... 164 3e-39 UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=... 164 3e-39 UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacil... 162 2e-38 UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovi... 162 2e-38 UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS... 160 6e-38 UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncult... 159 1e-37 UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penet... 159 1e-37 UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio... 155 2e-36 UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus... 154 4e-36 UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae... 150 3e-35 UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 150 5e-35 UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexi... 149 1e-34 UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio... 148 2e-34 UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum... 147 4e-34 UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma galli... 146 7e-34 UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solib... 145 1e-33 UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 145 2e-33 UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales... 144 4e-33 UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae Re... 143 6e-33 UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM... 143 7e-33 UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=... 142 1e-32 UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID... 141 3e-32 UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriac... 139 2e-31 UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Ta... 137 5e-31 UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogeni... 137 5e-31 UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermoph... 136 1e-30 UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 136 1e-30 UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophi... 135 1e-30 UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium ... 135 2e-30 UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 134 3e-30 UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putat... 134 4e-30 UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces ... 134 4e-30 UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium ... 134 5e-30 UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX Re... 133 7e-30 UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID... 131 3e-29 UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiropl... 130 6e-29 UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermac... 129 1e-28 UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius t... 129 2e-28 UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03S... 127 3e-28 UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas au... 126 7e-28 UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID... 126 1e-27 UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna... 124 3e-27 UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID... 124 5e-27 UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepI... 123 6e-27 UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID... 122 2e-26 UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus Rep... 121 3e-26 UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_... 119 1e-25 UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Toma... 118 3e-25 UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phyto... 117 6e-25 UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus... 115 2e-24 UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 108 2e-22 UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus b... 108 3e-22 UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba pol... 104 4e-21 UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogen... 93 9e-18 UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobac... 93 1e-17 UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus ... 90 1e-16 UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus... 89 2e-16 UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobiu... 86 1e-15 UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Anto... 85 3e-15 UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseil... 85 3e-15 UniRef50_C4HXN1 Endonuclease IV n=2 Tax=cellular organisms RepID... 81 5e-14 UniRef50_UPI000190C7DE endonuclease IV n=1 Tax=Salmonella enteri... 79 1e-13 UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Copr... 74 7e-12 UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=... 70 8e-11 UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepI... 70 9e-11 UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 T... 65 2e-09 UniRef50_B8PE96 Predicted protein n=1 Tax=Postia placenta Mad-69... 60 7e-08 UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus b... 54 7e-06 UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacteri... 52 2e-05 UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endon... 52 3e-05 UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 50 8e-05 UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=... 49 2e-04 UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Breviba... 47 8e-04 UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_... 46 0.001 UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 T... 44 0.006 UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine f... 44 0.007 UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepI... 43 0.011 UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoform... 43 0.013 >UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 Length = 285 Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH Sbjct: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE Sbjct: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA Sbjct: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 >UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organisms RepID=END4_KLEP7 Length = 284 Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust. Identities = 246/279 (88%), Positives = 259/279 (92%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKY+GAHVSA+GGLANAAIRAAEI+ATAFALFTKNQRQWRAAPL+ +TI EFKAACEKYH Sbjct: 1 MKYVGAHVSASGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLSDETIAEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + QILPHDSYLINLGHPV EALEKSRDAFIDEM RC+QLGL+LLNFHPGSHL QI EE Sbjct: 61 FGPGQILPHDSYLINLGHPVEEALEKSRDAFIDEMTRCQQLGLTLLNFHPGSHLQQIPEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +CLARIAESINIAL KT+GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 ECLARIAESINIALAKTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLR+ CEKTFA F R VGF+YLRGMHLNDAKS FGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRSAEACEKTFAAFERIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 HD F WIMQD RFDGIPLILETINPDIWAEEIAWL+AQQ Sbjct: 241 HDCFSWIMQDSRFDGIPLILETINPDIWAEEIAWLRAQQ 279 >UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CSD8_SHEPW Length = 284 Score = 359 bits (922), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 172/274 (62%), Positives = 206/274 (75%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAHVSA+GG+ANA + AA I A AFALFTKNQR+W + PL I F+ C + + + Sbjct: 7 IGAHVSASGGIANAPLNAASIGANAFALFTKNQRRWVSKPLDEAQIALFQQNCAEANISM 66 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ILPHDSYLINLGHP E L KSR+AF DE+ RCEQ+GL+LLNFHPGSHL QI + CL Sbjct: 67 DAILPHDSYLINLGHPDDELLTKSREAFYDEIARCEQIGLTLLNFHPGSHLRQIDTDKCL 126 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +RI+ESIN AL ++ VTAVIENTAGQGSNLG FE LA IIDGVEDKSRVG+CIDTCH Sbjct: 127 SRISESINFALSQSTTVTAVIENTAGQGSNLGHSFEQLAQIIDGVEDKSRVGICIDTCHM 186 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 FAAGYD+R+ A C F F + VG +YL+ MHLND+K+ SRVDRH SLG+G IG +A Sbjct: 187 FAAGYDIRSQASCLSAFDLFDKVVGNRYLKAMHLNDSKTKLNSRVDRHESLGKGEIGAEA 246 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 F +M + GIPLILET + D+WA EI WL++ Sbjct: 247 FSTLMTLEAVKGIPLILETTDADLWAAEINWLRS 280 >UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057Y5_BUCCC Length = 290 Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 138/278 (49%), Positives = 184/278 (66%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +KYIG H + +GGL + ++A +++ATAF+ F KN +W PL TI F+ C KY+ Sbjct: 2 IKYIGVHCNTSGGLEKSVLQANKLNATAFSFFVKNPLRWNTLPLQQSTIKSFRKFCNKYN 61 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y++ QILPH SYLINLGHP E +KS I+E+ C LGL ++N HPGS L +I+E+ Sbjct: 62 YSTLQILPHSSYLINLGHPDKEKKKKSCKTLIEEINFCNLLGLVMINIHPGSSLKKITEK 121 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 CL I+ SIN L KT + V+ENT+GQG N+G+ FEHLA II+ V +KSR+GVC+DT Sbjct: 122 KCLENISNSINYILKKTNNIIIVLENTSGQGGNMGYCFEHLAFIINKVRNKSRIGVCLDT 181 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FA+GY L F F +G KYLRG+HLND+K F S++DRH +LG GNI Sbjct: 182 CHLFASGYQLNNKNSFLNIFYRFHELIGLKYLRGIHLNDSKGKFNSKLDRHENLGYGNIK 241 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 F I++ F+ IP+ILET + IW +EI WLK Q Sbjct: 242 TSVFSKIVRVIEFNNIPIILETKDASIWKKEIQWLKKQ 279 >UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FAW5_VIBCH Length = 200 Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 140/198 (70%), Positives = 161/198 (81%) Query: 85 EKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVI 144 +KSR AF+DEM RC+QLGL+LLNFHPGSHL Q+SEE CLA IAESIN+A + V AVI Sbjct: 1 DKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVSEEACLATIAESINLAHRQVPNVIAVI 60 Query: 145 ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFA 204 ENTAGQGSNLG++FEHLAAIID VEDK RVGVC+DTCH FAAGYDLRT A C++TFA+F Sbjct: 61 ENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTCHTFAAGYDLRTKAACDETFAEFE 120 Query: 205 RTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETIN 264 R VG YLR MH+ND+K SRVDRHHSLG G IG + F +I QD RF+GIPLILETI+ Sbjct: 121 RVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGWECFEYIAQDARFNGIPLILETID 180 Query: 265 PDIWAEEIAWLKAQQTEK 282 PDIWA EIA L+ T+K Sbjct: 181 PDIWATEIATLRKFSTQK 198 >UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax=cellular organisms RepID=Q8IE02_PLAF7 Length = 597 Score = 279 bits (714), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 128/272 (47%), Positives = 183/272 (67%), Gaps = 2/272 (0%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 Y+GAH+SA+GG+ NA I + I AFALF KNQR+W +A LT + I +F+ C+KY++ Sbjct: 314 YLGAHISASGGVQNAPINSFNISGLAFALFLKNQRKWESAALTNENIKQFEENCKKYNFD 373 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPH SYLINL +P E +KS +F+D+++RCEQL + L NFHPGS + Q + ++ Sbjct: 374 KNFILPHGSYLINLANPDKEKRDKSYLSFLDDIKRCEQLNIKLYNFHPGSTVGQCTVDEG 433 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + +A+ IN +T V V+EN+AGQ +++G KFEHL II+ V DK R+GVC+DTCH Sbjct: 434 IKNVADCINKVHKETNNVIIVLENSAGQKNSVGSKFEHLRDIINLVHDKDRIGVCLDTCH 493 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGY+++T + F V KYL+ +HLND+KS GS +DRH ++G+G + D Sbjct: 494 TFAAGYNIKTFENFDNVMKQFDDIVNVKYLKAVHLNDSKSDIGSGLDRHENIGKGKLTMD 553 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAW 274 F++IM+ F IP+ILET PDI +E + Sbjct: 554 TFKYIMKSKYFKNIPIILET--PDITNDESIY 583 >UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organisms RepID=END4_DICDI Length = 542 Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 129/272 (47%), Positives = 179/272 (65%), Gaps = 2/272 (0%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG HVS G A A FT R W+ + +FK +C+ ++ Sbjct: 263 IGGHVSIKNGYPTLIQSVVAQGFKAVAFFTNPPRTWKHHTVKLDDSIKFKQSCKSLNFDV 322 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ILPH SY +NLG P E L+KSRD I EM+ CE LG+ NFHPGSHL +ISE + + Sbjct: 323 NCILPHGSYFLNLGSPNKENLQKSRDLMIHEMKNCEILGVKHFNFHPGSHLNEISESESI 382 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +AES++ L++T+ V AVIE TAGQG+NLG+ FEHL +I V+DK+RVGVC+DTCH Sbjct: 383 KIVAESLDYILERTKDVVAVIECTAGQGTNLGYTFEHLRDMIALVKDKTRVGVCLDTCHM 442 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 FAAGY++ T + C+ F +F + VGFKYL+G+HLND+KST GS++DRH ++G+G+IG Sbjct: 443 FAAGYNISTKSNCDVIFQEFDKVVGFKYLKGVHLNDSKSTCGSKLDRHENIGKGHIGTPC 502 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 F++++ D RF IP+ILET+ P + +E+ L Sbjct: 503 FKYLVNDKRFQNIPMILETVGP--YDQEVKLL 532 >UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible bacterial horizontal transfer (Fragment) n=4 Tax=cellular organisms RepID=Q5CT26_CRYPV Length = 364 Score = 276 bits (705), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 136/280 (48%), Positives = 186/280 (66%), Gaps = 8/280 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACE--KY 59 K++GAHVSA+GG+ + + I AF++F K R W A PL QTID FK CE K Sbjct: 79 KFVGAHVSASGGVDKSVNNSMNIAGMAFSMFLKPSRGWNAPPLKQQTIDLFKKNCETNKI 138 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 Y I PH SYLINLG+P E K AF DE++RC+ LG+ L NFHPGS + Q S+ Sbjct: 139 EYCKFCI-PHGSYLINLGNPDEEKRSKMYGAFEDELKRCDALGIKLYNFHPGSTVGQCSK 197 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E+ + I++ IN A ++T+ V V+EN A + +G++F+ L+ II+ V+DKSR+GVC+D Sbjct: 198 EESIQFISDCINKAHEQTKSVITVLENCA-ESKCVGYRFKELSEIIERVKDKSRIGVCLD 256 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYD+RT K +F +G KYL+ MHLND+K F S +DRH +LG+GNI Sbjct: 257 TCHLFAAGYDVRTAESFNKVMVEFEAVIGLKYLKAMHLNDSKGQFNSGLDRHENLGKGNI 316 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPD----IWAEEIAWL 275 G + F++IM D RF+ IPLILET +P+ ++ +EIA L Sbjct: 317 GMECFKFIMNDSRFNDIPLILETPDPNNDDKVYKKEIAIL 356 >UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Eumetazoa RepID=APN1_CAEEL Length = 396 Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 124/261 (47%), Positives = 175/261 (67%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVSAAGGL A A +FA+F +NQR W P++ + ++ + A + ++ Sbjct: 118 KMLGFHVSAAGGLEQAIYNARAEGCRSFAMFVRNQRTWNHKPMSEEVVENWWKAVRETNF 177 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 QI+PH SYL+N G P E LEKSR A +DE QR E+LG+++ NFHPGS + + +E+ Sbjct: 178 PLDQIVPHGSYLMNAGSPEAEKLEKSRLAMLDECQRAEKLGITMYNFHPGSTVGKCEKEE 237 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 C+ IAE+I+ ++KT+ + V+E AGQG+++G FE L IID V+ KSRVGVCIDTC Sbjct: 238 CMTTIAETIDFVVEKTENIILVLETMAGQGNSIGGTFEELKFIIDKVKVKSRVGVCIDTC 297 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA GYD+RT E+ +F VG+ YL+ +H+ND+K GS++DRH +G+G IG Sbjct: 298 HIFAGGYDIRTQKAYEEVMKNFGEVVGWNYLKAIHINDSKGDVGSKLDRHEHIGQGKIGK 357 Query: 242 DAFRWIMQDDRFDGIPLILET 262 AF +M D+R DGIP+ILET Sbjct: 358 AAFELLMNDNRLDGIPMILET 378 >UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2VNP8_NAEGR Length = 462 Score = 270 bits (690), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 137/285 (48%), Positives = 185/285 (64%), Gaps = 5/285 (1%) Query: 3 YIGAHVS-AAGGLANAAIRAAEIDATA-FALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +IG HVS + G+ A I A E FA F NQ+ + T + + F C+KY+ Sbjct: 172 FIGCHVSYGSKGVETAPIAAYETGCYGGFAFFLGNQKTYSQKEYTDKMVSTFIENCKKYN 231 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y +LPH SYLINL +P LEKS+ F+ E Q+CE+LG NFHPGS + + E Sbjct: 232 YDPKNLLPHASYLINLANPDQTKLEKSKTLFLSEYQKCERLGAVRYNFHPGSTVGATTLE 291 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +IAE IN A ++T GV +V+E TAG G ++G KFEHL IID VEDK+RVGVC+DT Sbjct: 292 AGCKQIAECINWANEQTVGVCSVLECTAGGGHSIGHKFEHLKMIIDHVEDKNRVGVCLDT 351 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYDLRT CEK F +F VGFKYL+GMHLND+K G++ DRH +LG+G++G Sbjct: 352 CHMFAAGYDLRTQEGCEKVFNEFDEIVGFKYLKGMHLNDSKVKLGTKKDRHENLGKGHLG 411 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD-IWAEEIAWLKAQQTEKAV 284 + F++I+ ++ F IP++LET P+ ++A+EI L + EK V Sbjct: 412 IEVFKYIVNNENFRNIPMVLET--PEGLYADEIQELYSYYNEKEV 454 >UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4 Tax=cellular organisms RepID=Q4N5F6_THEPA Length = 422 Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 128/277 (46%), Positives = 182/277 (65%), Gaps = 4/277 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 YIGAHVSA+GG N+ A I AFALF KNQR W L+ I++F+ ++Y Sbjct: 141 YIGAHVSASGGPDNSVGNAYNILGQAFALFLKNQRTWNWTDLSKSAIEKFQINMLNHNYD 200 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +LPH SYLIN+ +P E +++ D F+D++QRCE LG++L NFHPGS + + Sbjct: 201 PKFVLPHASYLINVANPDPEKRKRAFDNFLDDIQRCEVLGITLYNFHPGSTCGLCEKSEG 260 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + I++ IN AL+ T+GVT V+EN AGQ + +G KFE L IID VEDKSRVG+C+DTCH Sbjct: 261 IQHISDCINKALEMTKGVTIVLENAAGQKNVIGSKFEDLRQIIDKVEDKSRVGICLDTCH 320 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+RT + ++ +F + VG KYLR +HLND+KS GS +DRH ++G+G + Sbjct: 321 LFAAGYDIRTTEQFDEVMKEFDKVVGLKYLRAVHLNDSKSDLGSGLDRHENIGKGKLSEQ 380 Query: 243 AFRWIMQDDRFDGIPLILETINP----DIWAEEIAWL 275 FR+I+ F +P+ILET P +++ +E+ + Sbjct: 381 TFRFIVNSPYFKNMPIILETPVPEGNEEVYKQEVKLM 417 >UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=A8KBF9_XENTR Length = 363 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 124/275 (45%), Positives = 181/275 (65%), Gaps = 1/275 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA + A +I A+A +F +QR W++ L + + F+ C++ + Sbjct: 72 KFVGAHVSIQGGIWNAVLVARQIGASAIGMFLGSQRTWKSKALDDKAAERFQRTCKELGF 131 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S ILPH YL+NLG P + L+KS+ +DE+ +C QLGL++ N HPGS + +S Sbjct: 132 KSRYILPHSPYLMNLGSPKPDVLQKSQAMLVDELHKCHQLGLTMYNIHPGSCVGAMSVSK 191 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 CL IA+ IN+A + GV V+EN + QGS +G +FE L IID V DKSR+GVC+DTC Sbjct: 192 CLELIADGINLAHAQVPGVIVVLENMSCQGSTVGGRFEELRGIIDLVVDKSRIGVCLDTC 251 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAG+DL A E +F + VG +L+ +HLND++ G ++DRH ++G G+IG Sbjct: 252 HAFAAGHDLSKKAGLEHMLDEFNKVVGLSFLKAIHLNDSQGELGCKLDRHENIGHGHIGL 311 Query: 242 DAFRWIMQDDRFDGIPLILET-INPDIWAEEIAWL 275 + FR +M + RF+GIP+ILET ++ D A+EI L Sbjct: 312 EGFRHVMNEPRFNGIPMILETPLSSDDHAKEIELL 346 >UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (Vinckeia) RepID=Q4YZM8_PLABE Length = 559 Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 117/237 (49%), Positives = 164/237 (69%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 Y+GAH+SA+GG+ NA I + + AFALF KNQR+W + PLT + I +F C+KY++ Sbjct: 225 YLGAHISASGGVQNAPINSFNVSGLAFALFLKNQRKWESPPLTEENIKQFNENCKKYNFD 284 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPH SYLINL +P E EKS +F+D+++RCEQL + L NFHPGS + S E Sbjct: 285 KNLILPHGSYLINLANPDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQG 344 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + I++ IN A +T V V+EN+AGQ +++G KFEHL II ++DK R+GVC+DTCH Sbjct: 345 IKNISDCINRAHKETSNVIIVLENSAGQKNSIGSKFEHLRDIISQIDDKERIGVCLDTCH 404 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 FAAGYD+++ + E+ +F V KYL+ +HLND+KS GS +DRH ++G+GNI Sbjct: 405 TFAAGYDIKSYEKFEEVMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGNI 461 >UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage n=3 Tax=Saccharomycetales RepID=C4R5M7_PICPG Length = 347 Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 127/285 (44%), Positives = 183/285 (64%), Gaps = 8/285 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 GAH+S +GG++NA + I A +FALF K+ R+W + T +++FKA C++++Y S Sbjct: 6 FGAHISTSGGVSNAVTNSTNISAKSFALFLKSPRRWVSPMFTDDEVNKFKALCKEHNYNS 65 Query: 64 -AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +ILPH SY INL +P E EK+ AF+D+++RCE L + L NFHPGS L +E Sbjct: 66 RTEILPHGSYFINLANPDLEKEEKAYGAFLDDLKRCELLDIGLYNFHPGSDLGSDHQE-A 124 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L R+A++IN A+++T+ V VIEN AG G+ +G E + +ID V+DKSRVGVCIDTCH Sbjct: 125 LKRLAKNINTAINETKFVKIVIENMAGHGNLIGSDLEDIKTVIDMVDDKSRVGVCIDTCH 184 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+R + + +T+GF+YL +HLND+K+ G+ D H +G G +G + Sbjct: 185 TFAAGYDIRDEESYNAFWELYDKTIGFEYLSAIHLNDSKAPLGANKDLHQKIGWGFLGLE 244 Query: 243 AFRWIMQDDRFDGIPLILETIN---PDIWAEEIA---WLKAQQTE 281 FR I + GIPL+LET N P +W EEI WL+ + + Sbjct: 245 PFRLIANSEFLQGIPLVLETPNDNTPQLWEEEIKLLEWLEGKSKD 289 >UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490E9 Length = 479 Score = 253 bits (645), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 119/214 (55%), Positives = 151/214 (70%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S +GGL NA A I A +FALF ++QRQW+A PL F+ AC K+ Y IL Sbjct: 260 MSKSGGLWNAVSDAVSIGAKSFALFLRSQRQWQAKPLEDDNAARFQEACIKHGYPPHLIL 319 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 PH SYL+N G P L KSRD+ +DE+ RC++LGL+L NFHPGS I+ E+CL +I Sbjct: 320 PHGSYLLNCGSPNPATLSKSRDSLVDELSRCQKLGLTLYNFHPGSTCGDITIEECLDKIG 379 Query: 128 ESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 ESIN+AL KT GVTAVIEN + QG +G FE L IID V+DKSR+GVC+DTCHAFAAG Sbjct: 380 ESINMALAKTSGVTAVIENMSRQGHTIGGDFEELRGIIDRVKDKSRIGVCLDTCHAFAAG 439 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 YDL T + +K A+F R +GF+YL+G+HLND+K Sbjct: 440 YDLSTESGYKKMMAEFERVIGFQYLKGVHLNDSK 473 >UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples RepID=B3V621_9EURY Length = 287 Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 181/284 (63%), Gaps = 15/284 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVS AGGL NA + A EI+A F +F+KNQRQW A PLT + ++ FK + Sbjct: 3 LGAHVSVAGGLQNAILWALEIEADTFQMFSKNQRQWIAKPLTDKEVEAFKTPLAETDLGP 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM-------- 115 I HDSYLIN+G P ++++ AF++E RCE LG++ LNFHPGSH Sbjct: 63 LMI--HDSYLINMGSPDETKGKRAQVAFLEEYHRCEALGVAYLNFHPGSHTHPKKDMRDD 120 Query: 116 QISEEDCLARIAESINIALDKTQGVTA--VIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + + + L RIA +N L++T+G + VIEN AGQG+N+G KFE + IID + DK R Sbjct: 121 KQTRNEALERIANHMNKTLEETKGYGSKLVIENAAGQGTNVGIKFEEIKHIIDHINDKKR 180 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 VGVCIDT HA+A+GYD R + ++ + DF VG +YL +HLND+KS GSRVDRH + Sbjct: 181 VGVCIDTQHAWASGYDWRN--DFDQIWDDFEEIVGMEYLVALHLNDSKSDLGSRVDRHDN 238 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLK 276 +G G +G + F+ MQ+ R + + LET P++W EIA L+ Sbjct: 239 IGVGKLGKNTFKSFMQEKRLEHLAGYLETPGGPEMWKPEIAVLR 282 >UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putative n=4 Tax=cellular organisms RepID=Q5KCJ9_CRYNE Length = 463 Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 135/287 (47%), Positives = 171/287 (59%), Gaps = 15/287 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH--- 60 +GAHVSAAGG A A +RA A ALF K+QRQW++ P +T+ FK + Sbjct: 117 LGAHVSAAGGPATALLRAGLAGANGLALFVKSQRQWKSKPYEDETVQRFKELMKSKEEGG 176 Query: 61 --YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 Y IL H SYLINLG+P + S + F D++ RC QLG+ L N+HPGS + + Sbjct: 177 MGYGPESILVHGSYLINLGNPDPAKWKVSYECFKDDIARCHQLGIKLYNWHPGSTVGACT 236 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNL-GFKFEHLAAIIDGVEDKSRVGVC 177 +E+ A IA++IN V VIEN A GSN+ G + L++II VEDKSRV VC Sbjct: 237 KEESFALIAKAINQVHKDVPEVITVIENMANAGSNIVGTAWSDLSSIIKLVEDKSRVRVC 296 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDTCH FAAGYD+RTP +T F VG KYL G+HLND+K+ G+ D H ++G G Sbjct: 297 IDTCHTFAAGYDIRTPETYAETMKRFDEVVGNKYLAGVHLNDSKANLGANKDLHENIGLG 356 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD---------IWAEEIAWL 275 IG AFR IM+D GIPL+LET PD IW +EIA L Sbjct: 357 EIGLTAFRCIMRDPLMTGIPLVLETPAPDAPTPAEHLSIWTKEIALL 403 >UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID=B6KKD5_TOXGO Length = 667 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/281 (43%), Positives = 178/281 (63%), Gaps = 7/281 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAH+SAAGG+ NA + I AFA F KNQR+W + P++ ++ D FKA K Sbjct: 381 KFLGAHISAAGGVQNAPVNCLAIGGQAFAFFLKNQRRWDSPPISDESADGFKAEVAKLKL 440 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ILPH SYLINL +P + S +AF+D++QRCEQ+G+ FHPGS + Q ++E Sbjct: 441 DGPEHILPHGSYLINLANPDAAKRKVSYNAFLDDLQRCEQIGVHRYVFHPGSTVGQCTKE 500 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + IAE +N A+ T+ VT ++EN AGQ + L +FE L II V+ K R+GVC+DT Sbjct: 501 ESIRHIAECLNKAIAATKSVTILLENMAGQKNVLCSEFEDLRDIIALVDRKDRIGVCLDT 560 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH ++AG+D++T + E F VG KYL+ MH+ND+K+ GS +DRH LG+G +G Sbjct: 561 CHLYSAGHDIKTEEKFEAVMKKFDSIVGMKYLKAMHINDSKAPLGSGLDRHEHLGKGTLG 620 Query: 241 HDAFRWIMQDDR-FDGIPLILETIN-----PDIWAEEIAWL 275 F++IMQ F +PL+LET + P +W +E + Sbjct: 621 MAPFKFIMQHPTWFKDMPLVLETPDVDNSGPAMWRKETEMM 661 >UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold_7 n=10 Tax=Sordariomyceta RepID=D1Z7I7_SORMA Length = 500 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 175/290 (60%), Gaps = 16/290 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 YIGAHVS+AGG+ N+ A I A AFA+F K+QR+W + PL F+ + Y+ Sbjct: 125 YIGAHVSSAGGVQNSITNALHIGANAFAVFLKSQRKWVSPPLEPSAASSFRDLASLHSYS 184 Query: 63 SAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + +LPH SYL+NL +++ F+D++QRC LG+ L NFHPGS + EE Sbjct: 185 VGEHVLPHGSYLVNLAQIDKTKADQAYANFVDDLQRCATLGIKLYNFHPGSTGGEPIEEA 244 Query: 122 CLARIAESINIA-LDKTQGVTA-VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 C ARIA +N A +K G T VIEN G G+ +G +FE L I+DGVEDKSRVGVCID Sbjct: 245 C-ARIASQLNRAHKEKGTGETVTVIENMCGSGNVIGSRFEELKMIVDGVEDKSRVGVCID 303 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCHAFAAG+DLRTP +T F VG YL+ +HLND+K+ FGS D H ++G G + Sbjct: 304 TCHAFAAGHDLRTPEAFAETLKRFDEIVGLGYLKALHLNDSKAPFGSHRDLHANIGTGFL 363 Query: 240 GHDAFRWIMQDDRFDGIPLILETI------------NPDIWAEEIAWLKA 277 G AF ++ + +P++LET N +WA+EI L++ Sbjct: 364 GLRAFHNLVNCEAVQRLPMVLETPIEEKGADGKMVENKQVWADEIKLLES 413 >UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5DGG3_LACTC Length = 405 Score = 239 bits (611), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 117/260 (45%), Positives = 165/260 (63%), Gaps = 2/260 (0%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 GAH+S AGG++N+ A I AFA+F K+ R+W + T + ID+FK C++ Y Sbjct: 61 FGAHISTAGGISNSVTNAYNIGCNAFAMFLKSPRKWVSPDYTQEEIDKFKQKCKELGYNP 120 Query: 64 -AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +LPH Y INL +P E EKS +FID+++RCEQLG+ L NFHPGS L + + Sbjct: 121 LTDVLPHGQYFINLANPEPEKAEKSYASFIDDLKRCEQLGVGLYNFHPGSSL-KGNHAKQ 179 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L ++A IN A+ +T+ V V+EN AG GS +G + L +ID VE+K RVGVC+DTCH Sbjct: 180 LRQLASYINKAIAETKFVKIVLENMAGTGSLVGSDLQDLKDVIDMVENKDRVGVCVDTCH 239 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+ + +K + F +TVGFKYL +HLND+K+ + D H LG+G +G + Sbjct: 240 TFAAGYDISSKDSYDKFWQTFDKTVGFKYLSAIHLNDSKAPLAANRDLHEKLGQGFLGLE 299 Query: 243 AFRWIMQDDRFDGIPLILET 262 F+ + + GIP+ILET Sbjct: 300 VFKLVANSEFLRGIPVILET 319 >UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20 Tax=Saccharomycetales RepID=APN1_YEAST Length = 367 Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 118/281 (41%), Positives = 170/281 (60%), Gaps = 7/281 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 GAH+S AGG++N+ A +FA+F K+ R+W + T + ID+FK C Y+Y Sbjct: 17 FGAHMSGAGGISNSVTNAFNTGCNSFAMFLKSPRKWVSPQYTQEEIDKFKKNCATYNYNP 76 Query: 64 -AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +LPH Y INL +P E EKS ++F+D++ RCEQLG+ L N HPGS L + + Sbjct: 77 LTDVLPHGQYFINLANPDREKAEKSYESFMDDLNRCEQLGIGLYNLHPGSTL-KGDHQLQ 135 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L ++A +N A+ +T+ V V+EN AG G+ +G L +I +EDKSR+GVCIDTCH Sbjct: 136 LKQLASYLNKAIKETKFVKIVLENMAGTGNLVGSSLVDLKEVIGMIEDKSRIGVCIDTCH 195 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+ T + +F +GFKYL +HLND+K+ G+ D H LG+G +G D Sbjct: 196 TFAAGYDISTTETFNNFWKEFNDVIGFKYLSAVHLNDSKAPLGANRDLHERLGQGYLGID 255 Query: 243 AFRWIMQDDRFDGIPLILETI--NPDIWAEEIA---WLKAQ 278 FR I + GIP++LET N + + EI WL+++ Sbjct: 256 VFRMIAHSEYLQGIPIVLETPYENDEGYGNEIKLMEWLESK 296 >UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblastina RepID=Q8SQT2_ENCCU Length = 275 Score = 236 bits (602), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 116/277 (41%), Positives = 170/277 (61%), Gaps = 9/277 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K IGAH+S + G+ + + A+F K+QR++ P+ + F+A H Sbjct: 3 KLIGAHLSISKGIHTIQAQMELLGLDTCAIFLKSQRRYLTPPMKQGAAEMFRA-----HV 57 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + I+PH SYLIN G+P + ++KS + +D+++RC+ LG+ + N HPGS + Sbjct: 58 RHPELIVPHGSYLINFGNP--DLVDKSMECLVDDLERCKSLGIGMYNMHPGSSKGK-GRA 114 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +CL I +N AL + QGVT +IEN AGQGS +G FE L II G+ED+ R+GVC+DT Sbjct: 115 ECLRSIGHHVNTALSRVQGVTVLIENMAGQGSVVGSSFEELRDIIGGIEDRERIGVCLDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F AG+D+ T + + F R VG ++L+ MH+ND+K GS+ DRH S+G+G IG Sbjct: 175 CHLFGAGFDITTEEKFLEVMERFDRVVGLEFLKAMHINDSKEALGSKKDRHESIGKGMIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 AFR+IM FD IPLILET +P + EE +L++ Sbjct: 235 EKAFRFIMNSKVFDNIPLILETPDPGKYKEEADFLRS 271 >UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Trichocomaceae RepID=B6QA11_PENMQ Length = 562 Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/263 (41%), Positives = 168/263 (63%), Gaps = 4/263 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAHVSAA G+ N+ + + I AFALF K+QR+W PL + ++F C Y Y Sbjct: 166 FVGAHVSAAKGVQNSILNSVHIGGNAFALFLKSQRKWDNPPLQDEHKEQFLKFCRDYEYD 225 Query: 63 SAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A+ ILPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ Q + E Sbjct: 226 AAKYILPHGSYLVNLAQEDETKAKQAYDSFLDDLKRCEKLGIRLYNFHPGA-AGQSTVES 284 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK--SRVGVCID 179 ++R+A+S+ AL T+ V V+E G G+ LG L A+I + ++ SR+GVC+D Sbjct: 285 AISRLAKSLTKALAATETVIPVLETMCGHGTTLGGDLSELGAVISQIPEQYHSRIGVCVD 344 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH+F+ GYDL P + +F +G K+LR +HLND+K+ GS+ D H ++G G + Sbjct: 345 TCHSFSYGYDLVAPEGFKAFMQEFDEKIGLKFLRALHLNDSKAPKGSKRDLHANIGTGFL 404 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 G AF +M ++RF G+P+ILET Sbjct: 405 GLRAFHNVMNEERFQGLPMILET 427 >UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=END4_CHLAD Length = 286 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/273 (43%), Positives = 171/273 (62%), Gaps = 5/273 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S +GG++ + R + A +F KN+RQW A P++ + + F+A E+ Sbjct: 1 MPRFGAHMSISGGVSKSFARGESVGLDAMQIFAKNERQWTAKPISAEEMAAFQA--EQQR 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINL P + EKS AF DE++RC QL + L HPG+H I EE Sbjct: 59 TGIHPVIVHDSYLINLAAPADDLREKSIVAFADELERCAQLKIPYLVTHPGAH-TGIGEE 117 Query: 121 DCLARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+A++I+ L + G T +I E TAGQG+ LG++FEHLA + + + R+GVC+ Sbjct: 118 AGLVRVADAISRLLAEGVGGTTMILLETTAGQGTALGYRFEHLARLFELIPYHDRLGVCV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+R P + TFA+ R VG + ++ HLND++ GSRVDRH +G+G Sbjct: 178 DTCHIFAAGYDIRDPDTYDATFAELDRLVGLERVKCFHLNDSQKDLGSRVDRHAHIGQGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 IG +AFR ++ D RF +P+I+ET + AE+ Sbjct: 238 IGTEAFRLLVNDPRFAHLPMIIETPKGEDMAED 270 >UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofung) n=5 Tax=Eurotiomycetidae RepID=C8V628_EMENI Length = 544 Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 116/264 (43%), Positives = 168/264 (63%), Gaps = 6/264 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAHVSAAGG+ NA + + AFALF K+QR+W PL + D F C+++ Y Sbjct: 134 FVGAHVSAAGGVFNAVNNSKHVGGNAFALFLKSQRKWDNPPLQDEHRDNFVKLCKEHDYD 193 Query: 63 SAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A+ +LPH SYL+NL +++ DAF+D+++RCE LG+ L NFHPGS + Sbjct: 194 AAKYVLPHGSYLVNLAQEDEAKAKQAYDAFLDDLRRCEALGIRLYNFHPGS-TNKTPLSS 252 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLG---FKFEHLAAIIDGVEDKSRVGVCI 178 LAR+A+++ AL T V V+E G GS +G +F L A+I E SR+GVCI Sbjct: 253 ALARLAKALTNALAATSNVVPVLETMCGHGSTIGGSLSEFRDLLALIPK-EYHSRIGVCI 311 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH+FAAGYDL +PA + +F +G ++LR +HLND+K+ GS+ D H ++G G Sbjct: 312 DTCHSFAAGYDLVSPAGFQAFLKEFEDLIGIQHLRALHLNDSKAPGGSKRDLHANIGTGF 371 Query: 239 IGHDAFRWIMQDDRFDGIPLILET 262 +G AF +M + RF+G+P+ILET Sbjct: 372 LGLRAFHNVMNEPRFEGLPMILET 395 >UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepID=D1C4C4_SPHTD Length = 288 Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 126/282 (44%), Positives = 170/282 (60%), Gaps = 8/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S AGG+ A RA ++D A +FTKN QW A P+ + ++ F+ E+ Sbjct: 1 MLLFGAHMSIAGGVDKAIDRAEKVDCDAVQIFTKNNNQWNAKPIPPEQVERFQQRQEEAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ HDSYLINL P EKS DAF E++RCE LG+ L HPGSH E+ Sbjct: 61 IRA--VVAHDSYLINLASPDDALWEKSIDAFRVELERCELLGVPYLVTHPGSH-TGAGED 117 Query: 121 DCLARIAESIN-IALD-KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + R+A+++N I +D V ++E TAGQGS LG++FE L AI+D V + RVG C Sbjct: 118 FGIQRVADALNRIHIDLPGYRVMTLLEITAGQGSALGYRFEQLRAIVDRVAEPERVGYCF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGY+LRTP +T F R +G LR +HLND+K GSRVDRH +G G Sbjct: 178 DTCHAFAAGYELRTPEGYAETMDAFDRILGLANLRALHLNDSKRELGSRVDRHDHIGAGM 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIW---AEEIAWLKA 277 IG F ++ D R +G+P +LET D AE +A L++ Sbjct: 238 IGLAGFHNVVNDPRLEGLPGLLETPKSDDLHEDAENLARLRS 279 >UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VTW7_PYRTR Length = 471 Score = 223 bits (568), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 123/289 (42%), Positives = 170/289 (58%), Gaps = 21/289 (7%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAHVS AG + A AFA+F KNQR+W + + + +D F CE + + Sbjct: 125 IGAHVSIAG-----VAKTDLTSANAFAMFMKNQRKWESKDIDQEHVDFFVKWCEDHKINA 179 Query: 64 AQI-LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ LPH SYL+NL HP ++S D+F++++ RC +LG+ L NFHPG+ EE Sbjct: 180 AECCLPHGSYLVNLAHPDPAHKKQSYDSFLNDLSRCHRLGIRLYNFHPGNSNATTREEGI 239 Query: 123 LARIAESINIA-LDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I+E+IN A D G V V+E A G+ +G F +AAII V DKSRVGVC+DT Sbjct: 240 IT-ISENINQAHADPASGKVVTVLETMASLGNTIGGNFTDIAAIIRLVNDKSRVGVCLDT 298 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYDLRTP KT F + +G +YL+ H+ND+K+ F S D H +G G +G Sbjct: 299 CHVFAAGYDLRTPEAYAKTIDKFDKEIGLEYLKAFHVNDSKAPFSSHRDVHARIGTGYLG 358 Query: 241 HDAFRWIMQDDRFDGIPLILE----TINPD--------IWAEEIAWLKA 277 AF +M D+RF G+P++LE T++ D WA EI L++ Sbjct: 359 LQAFHNLMNDERFHGLPMVLETPCDTLDADGKKVEDKGSWAREIKMLES 407 >UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Eurotiomycetidae RepID=B8N4I3_ASPFN Length = 569 Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 114/263 (43%), Positives = 166/263 (63%), Gaps = 6/263 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVSAA G+ NA + I AFALF K+QR+W PL D F+ C + Y + Sbjct: 158 VGAHVSAAKGVFNAINNSMHIGGNAFALFLKSQRKWDNPPLQDDHRDNFRRLCIENKYDA 217 Query: 64 AQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ ILPH SYL+NL +++ D+F+D+++RCE LG++L NFHPGS Q + D Sbjct: 218 AKHILPHGSYLVNLAQEDKAKAKQAYDSFLDDLRRCEALGINLYNFHPGS-ANQSNFSDA 276 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFK---FEHLAAIIDGVEDKSRVGVCID 179 L+R+A+++ AL T VT V+E G G+ +G K F L A+I E R+G+CID Sbjct: 277 LSRLAKALTNALAATSTVTPVLETMCGHGTTIGGKLTEFRDLLAMIP-QEYHPRIGICID 335 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH+FAAGYDL +P + +F +G ++LR +HLND+K+ GS+ D H ++G G + Sbjct: 336 TCHSFAAGYDLASPEGFKAFMKEFEDVIGLQHLRALHLNDSKAPRGSKRDLHANIGTGFL 395 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 G AF +M + RF+G+P++LET Sbjct: 396 GLRAFHNVMNEPRFEGLPMVLET 418 >UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospiraceae RepID=END4_HALHL Length = 297 Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 163/281 (58%), Gaps = 9/281 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVSAAGG A R EI LFT+NQR W+ P+ D F+ A + Sbjct: 1 MPEIGAHVSAAGGPQRAPERGGEIGCDCMQLFTRNQRSWKVKPIAPGEADAFRRA--RAE 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ H SYLINL E KS+ A E++RC QLG+ LLNFHPG+HL + E Sbjct: 59 HGIGAVMSHASYLINLAATDPEKHAKSQTALEAELERCHQLGIELLNFHPGAHL-EAGIE 117 Query: 121 DCLARIAESINIAL----DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + IA ++N DKT V V+EN AGQGS +G F LAAI++ +E R GV Sbjct: 118 AGIETIAATLNAICRNHPDKTD-VCLVLENVAGQGSTVGADFAELAAILERLETPERFGV 176 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DT HAFAAGY+L T A + +A F +G L +HLND++ GSR DRH +G Sbjct: 177 CVDTAHAFAAGYELHTAAGWDAMWAAFDDHIGLNRLVALHLNDSRPPCGSRKDRHALIGR 236 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILET-INPDIWAEEIAWLK 276 G IG +AFR + D R +P +LET P+ WA+EI WL+ Sbjct: 237 GEIGPEAFRRAVTDPRTASLPQMLETPAGPEGWAQEIDWLR 277 >UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales RepID=END4_CHLT2 Length = 288 Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 118/277 (42%), Positives = 163/277 (58%), Gaps = 7/277 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH SAAGGL NA +I AT LFT NQRQW+ LT + +D+F+ A + + Sbjct: 12 LGAHTSAAGGLHNALYEGRDIGATTVQLFTANQRQWKRRALTQEMVDQFRIALNET--SL 69 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + I+ H YL N G P E LEK+R E+ C LG+S +NFHPG+ L S+E CL Sbjct: 70 SYIMSHAGYLNNPGAPNPEILEKTRVCMHQEIADCISLGISFVNFHPGAALSD-SKESCL 128 Query: 124 ARIAESIN---IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 R S + + + ++E TAGQGS +G FE LA +I G++ +GVC+DT Sbjct: 129 DRAITSFSQMAPLFENHPPLVVLLETTAGQGSLIGSSFEELAYLIQGIKALIPIGVCLDT 188 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+ + A E+ F +G +LR +HLND+ G DRH +GEG IG Sbjct: 189 CHIFAAGYDISSVAGWEQVLKHFDAVIGLSFLRAIHLNDSVFALGKNKDRHAPIGEGCIG 248 Query: 241 HDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLK 276 D+F ++MQD+R +P LET PD+W +EI +L+ Sbjct: 249 SDSFCFLMQDERTRMLPKYLETPGGPDLWTKEIRYLQ 285 >UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=Q4PHV5_USTMA Length = 552 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 121/304 (39%), Positives = 168/304 (55%), Gaps = 45/304 (14%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +IGAH+S+AGG+ NA + A I AF+ F + + QW + P+ + ++FK ++ + Sbjct: 158 FIGAHISSAGGVENAPLNALRIGGNAFSCFVRPKMQWASNPIRDTSAEQFKQHVMQHSFM 217 Query: 63 SAQ------------------------ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRC 98 A ++PH YL+NL +P EKS AFID++QRC Sbjct: 218 PAALSVKKEQDIEQETHRLSDVEEYGYVVPHGCYLVNLANPDESKREKSFQAFIDDLQRC 277 Query: 99 EQLGLSLLNFHPGSHLM-----------------QISEEDCLARIAESINIALDKTQGVT 141 EQLG+ L NFHPGS + + ++ D A +A IN A T V Sbjct: 278 EQLGIRLFNFHPGSMTVASIYGEEPPDVGPRSEVRAAKADACALVASYINRAHSLTSSVI 337 Query: 142 AVIENTAGQGSN--LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKT 199 +IEN AG ++ LG LA+II GV+DKSRVGVCIDTCHAFAAGYDL TPA T Sbjct: 338 ILIENMAGSKNDTILGSSLADLASIISGVQDKSRVGVCIDTCHAFAAGYDLTTPA-AYAT 396 Query: 200 FADFART-VGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPL 258 F + + +G++ +R HLND+K + DRH ++ G+IG F I+ D R++GIPL Sbjct: 397 FTELIDSKIGWQTVRAFHLNDSKFPLACKRDRHANIARGHIGLGGFWNIVNDQRWNGIPL 456 Query: 259 ILET 262 ILET Sbjct: 457 ILET 460 >UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=END4_HERA2 Length = 293 Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 121/269 (44%), Positives = 153/269 (56%), Gaps = 6/269 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAHVS GGL A RA +FTK+QRQW A PLT F+AA Sbjct: 1 MPNLGAHVSTVGGLQTAFERAQATTCHVIQIFTKSQRQWNAKPLTAADCANFQAAHRDAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINLG P EKS AF E++RC+QLG+ L HPG+H+ E Sbjct: 61 MPP--LIAHDSYLINLGSPDNGLWEKSIAAFRVELERCQQLGVGSLVTHPGAHVGS-GEA 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+ ++ L + G ++E TAGQG+ LG FEHLA +I+ + R+G+C Sbjct: 118 AGLDRVGAALRRLLAEDVGGETQILLEITAGQGTALGHSFEHLARLIELCDGHPRLGICF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH AAGYD RT + TF F R +G LR HLND+K+ GSRVDRH +GEG Sbjct: 178 DTCHGLAAGYDFRTAEGYQTTFDHFDRLIGIDRLRAFHLNDSKNDLGSRVDRHTHIGEGF 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETIN-PD 266 +G + F IM D RF IP+ LET PD Sbjct: 238 VGLEGFELIMNDPRFQTIPMALETPKEPD 266 >UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Planctomycetaceae RepID=A6CAW7_9PLAN Length = 285 Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 155/264 (58%), Gaps = 5/264 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAH S AGG A AAE + +FTKN QWRA PLT + I+ F+ E Sbjct: 1 MPLLGAHQSIAGGYYKAVDTAAEFEMDCVQIFTKNNNQWRAKPLTDKDINLFREHLESTG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYLINL P E KS DA + E+QR E LGL HPGS + SEE Sbjct: 61 V--GRPCSHMSYLINLASPKEELWNKSIDAVVVELQRAEALGLEGAVMHPGSFVTS-SEE 117 Query: 121 DCLARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L RI +I+ +T+G I E TAGQGSNLGF+FE LA +++ V+D R+G+C+ Sbjct: 118 EGLDRIVAAIDRIHQETEGFQTQIWLETTAGQGSNLGFRFEQLAYLLNQVQDGGRLGICV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGY L +E + T ++ + +GF + HLND+K FGSR DRH ++G G Sbjct: 178 DTCHIFAAGYPLIKKSEYKATMSELDQVIGFDRICAFHLNDSKCEFGSRKDRHENIGRGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILET 262 +G + FR ++ D F P+ LET Sbjct: 238 LGLEPFRHLLNDPVFQDRPMYLET 261 >UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 Tax=Schizosaccharomyces pombe RepID=APN1_SCHPO Length = 342 Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/256 (42%), Positives = 160/256 (62%), Gaps = 4/256 (1%) Query: 24 IDATAFALFTKNQRQWRAAPLTTQTIDEF-KAACEKYHYTSAQILPHDSYLINLGHPVTE 82 I A + A F K+QR+W + L+ +F + A E S Q+L H SYLIN+ + + Sbjct: 15 ISANSCAFFVKSQRKWTSPDLSEDVAQKFLETASEMKFDASKQVLVHGSYLINMANADEQ 74 Query: 83 ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTA 142 E++ + F+D+++RCE+LG+ L NFHPGS ++E+ + +AE IN A ++T+ V Sbjct: 75 KREQAFNCFVDDLKRCERLGVGLYNFHPGS-TASCTKEEGINNLAECINRAHEETKSVII 133 Query: 143 VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFAD 202 V EN AGQG+ LG F+ AA+ +++ R VC+DTCH FAAGYD+RT +K + Sbjct: 134 VTENMAGQGNCLGGTFDDFAALKSKIKNLDRWRVCLDTCHTFAAGYDIRTEESYKKVIDE 193 Query: 203 FARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 F VG KY+ G HLND+K+ GS D H ++G G +G + FR IM D R+DGIPL+LET Sbjct: 194 FDEKVGAKYVSGWHLNDSKAPLGSNRDLHENIGLGFLGLEPFRLIMNDSRWDGIPLVLET 253 Query: 263 --INPDIWAEEIAWLK 276 +P+ W +E+ L+ Sbjct: 254 PAKSPEQWKKEVELLR 269 >UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRW0_9DELT Length = 290 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 106/267 (39%), Positives = 160/267 (59%), Gaps = 8/267 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +Y+GAH S +GGL A R + TA +FT+NQRQW+ +P+ Q ++F+ A +++ Sbjct: 5 RYLGAHCSVSGGLYRAVERIEGLSGTALQIFTRNQRQWKTSPVKEQEAEQFRQALQQW-- 62 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + HDSYLINL P E L+KS AF E++RC LG+ L HPG+H Q ++ Sbjct: 63 GDYPVFSHDSYLINLASPDREILKKSVQAFAGELKRCALLGIPGLVTHPGAHKGQGLDKG 122 Query: 122 CLARIA---ESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 A + E++++AL + + V ++E T+GQG+ LG F+ L II ++ R+G Sbjct: 123 LQAYVRALDEALDLALQQCPESADVEVLLETTSGQGTVLGSTFQELDFIISTSKNSDRLG 182 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 VC DTCH FAAGYD+RT T TVG + ++ +HLND+ GSR DRH +G Sbjct: 183 VCFDTCHVFAAGYDMRTRESYNATMQTLDSTVGLQRVQAVHLNDSSYGLGSRGDRHEHIG 242 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILET 262 +G +G + FR ++ D RF +P+++ET Sbjct: 243 KGEMGLEPFRLVLNDPRFYDVPMVIET 269 >UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R9_9PLAN Length = 321 Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/301 (42%), Positives = 163/301 (54%), Gaps = 37/301 (12%) Query: 4 IGAHVSAAGGLANAA--------------------------IRAAEIDATAFALFTKNQR 37 +GAH+S AGGL AA RA + D L TKN Sbjct: 15 LGAHMSIAGGLHKAAEAAANVRCDVVQIFTGSPSQWPFVQASRAKKTDVQFDGLLTKNNN 74 Query: 38 QWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQR 97 QWRA ++ + +FK A ++ T L H SYLINL P E +KS +A + E+ R Sbjct: 75 QWRAKAISDKEEQQFKEALARHKITLP--LAHASYLINLASPDEELWQKSIEAMVIELGR 132 Query: 98 CEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN----IALDKTQGVTAVIENTAGQGSN 153 QLG+ + HPGS SE LARIA +I+ +A D T + ++ENTAGQGSN Sbjct: 133 ASQLGIFGVVMHPGS-FTTSSEAVGLARIAAAIDKIHTLAPDATAQI--LLENTAGQGSN 189 Query: 154 LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLR 213 LG+KFEHL II V+ R+GVCIDTCH FAAGY L T E + TF VG +R Sbjct: 190 LGWKFEHLGEIIAQVKQADRLGVCIDTCHTFAAGYPLGTKEEFDATFESLENAVGINRIR 249 Query: 214 GMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 HLND+K GSRVDRH +G+G +G + FR ++ D RF +P+ LET D A+E Sbjct: 250 AFHLNDSKKELGSRVDRHEHIGQGCLGLEPFRHLLNDKRFTKVPMYLETPKED--ADEEP 307 Query: 274 W 274 W Sbjct: 308 W 308 >UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterineae RepID=A7H9B2_ANADF Length = 280 Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 116/276 (42%), Positives = 154/276 (55%), Gaps = 11/276 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH AGG++ A RA A +FT+N R W A PL + I FK ++ + Sbjct: 7 LGAHEGIAGGVSTAFTRAEADGADCLQIFTRNARGWAAKPLEAEEIARFKGEAKRTKLPT 66 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 A H SYLIN + KS DE+ RCE LG+ L FHPGSH E + + Sbjct: 67 AA---HSSYLINCCSEDADIRRKSWAGLADELGRCEALGIPSLIFHPGSH---CDEAEGI 120 Query: 124 ARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVGVCIDT 180 +AE++ ALD G ++E TAGQGS+LG++FEH+AAI D V + RVGVC+DT Sbjct: 121 RLVAEAMERALDAVPGKARLLVETTAGQGSSLGWRFEHVAAIRDAVPAAKRRRVGVCVDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+ A +T + R VG +R HLND+K G RVDRH +GEG +G Sbjct: 181 CHVFAAGYDITHEAGYHRTIEELDRVVGLANVRAFHLNDSKKPLGCRVDRHEHIGEGAMG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 FR+++ D RF +P +ET W E I L+ Sbjct: 241 ITPFRFLVNDARFAELPGFVET--ESRWKENIEVLR 274 >UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 RepID=C5G113_NANOT Length = 468 Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 97/231 (41%), Positives = 146/231 (63%), Gaps = 4/231 (1%) Query: 35 NQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEALEKSRDAFID 93 ++R+W PL + D F+ AC +Y +A+ ILPH SYL+NL + + D+F+D Sbjct: 143 HRRKWDNPPLQEEHRDRFRRACIDNNYDAAKHILPHGSYLVNLAQEDPAKAKVAYDSFLD 202 Query: 94 EMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSN 153 +++RCE LG+ L NFHPG+ + S E L+R+A+++ ALD T+ V V+E G G+ Sbjct: 203 DLRRCEALGIKLYNFHPGA-TNKTSLESSLSRLAKALISALDATETVIPVLETMCGHGTT 261 Query: 154 LGFKFEHLAAIIDGVEDK--SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKY 211 +G H + + + R+GVC+DTCH+FAAGYDLRTPA E+ +F TVG ++ Sbjct: 262 IGGPLSHFRDLFALIPESYHPRLGVCVDTCHSFAAGYDLRTPAGWERFMTEFDETVGLRF 321 Query: 212 LRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 LR HLND+K+ GS+ D H ++G G +G AF +M D R +G+P++LET Sbjct: 322 LRAWHLNDSKTPLGSKRDLHANIGTGFLGLRAFHNLMNDKRVEGMPMVLET 372 >UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9J8_PLALI Length = 291 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 110/265 (41%), Positives = 149/265 (56%), Gaps = 7/265 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 + +GAH+S AGG A + LFTKN QWR PLT I +F+ + Sbjct: 3 VSILGAHMSIAGGCYKALEAGHRLGMGCVQLFTKNNNQWRGKPLTEDDIRQFQTT---WK 59 Query: 61 YTSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 T Q H SYLINL P KS DA +DE++R E LG+ + HPGS ++ + Sbjct: 60 STGIQATCAHASYLINLASPDDVLWNKSCDALVDELERAEALGIPGVVLHPGS-AVKSTP 118 Query: 120 EDCLARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 E + R+ E+++ K +G A + E TAGQGS LG +FE L+ ++DGV + R+G+C Sbjct: 119 EAGITRVIEALDDVHAKCKGFRAQVWLETTAGQGSCLGARFEELSQMLDGVREPDRIGIC 178 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDTCH FAAGY L T + T F++ +GF +R HLND+ GSRVDRH +GEG Sbjct: 179 IDTCHIFAAGYPLHTADDYADTLEKFSQKIGFDRVRAFHLNDSMKGLGSRVDRHAHIGEG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILET 262 +G F ++ DDR IP LET Sbjct: 239 QLGRIPFSRLLHDDRLSHIPKYLET 263 >UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacterium RepID=B3XXI6_9BACT Length = 290 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 111/283 (39%), Positives = 150/283 (53%), Gaps = 21/283 (7%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAH+SAAGG+ A RA E +FTK+ RQW+A PLT + ID ++ A +Y Sbjct: 3 IGAHISAAGGVYKAFARAREAGCETMLVFTKSNRQWKAKPLTEKDIDLYQQARAEYSDID 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H SYLIN+ P + EKS A E++R L + + FHPGS ++ E L Sbjct: 63 P-VAVHASYLINIASPKDDLWEKSYQALKVEVERAGALDIPFITFHPGS-FVKSDAESGL 120 Query: 124 ARIAESINIALDKT----QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 ARI + LD+T T +E AGQG+NLG+ FE LA ++DG+ R+G+C D Sbjct: 121 ARIITGVKRLLDETAVTAPNTTVCLETMAGQGTNLGYMFEQLATLLDGIGRGPRLGICFD 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYD+RTP T F +G ++ H ND+K G R DRH +G+G I Sbjct: 181 TCHVFAAGYDIRTPEAYAATMQAFDNVIGLDQIKVFHFNDSKFELGQRKDRHAHIGDGFI 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 G + F M D R WA A ++ +TEK Sbjct: 241 GAEGFANFMNDPR---------------WANHAAHIETPKTEK 268 >UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FH43_SORC5 Length = 323 Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 15/285 (5%) Query: 5 GAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSA 64 GAH S AGGL A A E +FTK QWR L+ + I F+AA + A Sbjct: 7 GAHESVAGGLHRAIALAGEDRCEVVQIFTKVSGQWREPALSAEQIAAFRAARAAWAGAGA 66 Query: 65 Q---ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 L H SYLINL LE+SR+A E+ RC+ LG+ + FHPG+H + EE Sbjct: 67 GVGRTLAHASYLINLCADDAAILERSREALFQELARCDALGIDFVVFHPGAH-RSLGEEA 125 Query: 122 CLARIAESINIALDKTQGVTA--VIENTAGQGSNLGFKFEHLAAIIDGV-EDKSRVGVCI 178 L RI ES++I L + +G+ A IENTAGQGS LG + + +AA+I+ + SR+GVCI Sbjct: 126 GLDRIGESLSIVLSRGKGLRARLCIENTAGQGSTLGDRVDQIAAMIERAGPEGSRLGVCI 185 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HAFAAG+DLR+ A E+ ++DF R +G L+ MH+ND+K+ G RVDRH +G+G Sbjct: 186 DTQHAFAAGHDLRSEAGYERFWSDFGRLLGLHRLQCMHVNDSKAALGQRVDRHERVGDGE 245 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI------WAEEIAWLKA 277 +G F + D R +P ++E P + + EEIA L+A Sbjct: 246 MGLAPFWRLANDARLARVPAVIEL--PPLSKERRGYLEEIARLRA 288 >UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0TX36_PHANO Length = 466 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/274 (39%), Positives = 157/274 (57%), Gaps = 22/274 (8%) Query: 25 DATAFALFTKNQ------RQWRAAPLTTQTIDEFKAACEKYHYTSAQI-LPHDSYLINLG 77 D + L TKN A LT + + F A C+++ +A+ LPH SYL+NL Sbjct: 110 DKSPLELRTKNSPLIVGAHVSTAGALTPEVANLFIAGCKEHGIDAAKCCLPHGSYLVNLA 169 Query: 78 HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA-LDK 136 HP +++ D+F+++++RC LG+ L NFHPG + + E+ + IA++IN A DK Sbjct: 170 HPDPARKKQAFDSFLNDLERCNTLGIKLYNFHPG-NANATTREEGIRLIAQNINEAHQDK 228 Query: 137 TQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAE 195 G V AV+E A G+ +G F LA II V+DK+RVGVC+DTCH FAAGYDLRTP Sbjct: 229 ASGDVVAVLETMASLGNTIGGTFADLADIIKLVDDKARVGVCLDTCHVFAAGYDLRTPEA 288 Query: 196 CEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 T +F +G KYL+ +H+ND+K+ S D H ++G G +G +F I+ D R G Sbjct: 289 YAATMKEFDDVIGLKYLKALHMNDSKAPLSSYRDLHANIGTGFLGLSSFHNIVNDKRLHG 348 Query: 256 IPLILETI------------NPDIWAEEIAWLKA 277 +P++LET + IWA EI L++ Sbjct: 349 LPMVLETPVDSVDENGKKTDDKGIWAREIKMLES 382 >UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental samples RepID=B3V640_9ARCH Length = 280 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/260 (37%), Positives = 149/260 (57%), Gaps = 4/260 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G HVS AG + + RA ++ F ++T+N R W+ + L I FK+ + ++ Sbjct: 3 LGVHVSIAGSIDLSVDRARSLNLNTFQIYTRNPRGWKFSDLKESNILNFKSKIISENISA 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H YL NL P + S + E++RC +LG+ + H GSHL E L Sbjct: 63 --VVCHMPYLPNLSSPKDDLHNMSIVSLASELERCNKLGIDYVVTHIGSHLGS-GLEQGL 119 Query: 124 ARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 R+ ++ N A+ D ++ENTAG +N+G KFE L I D ++DKSR+G C DTCH Sbjct: 120 NRVVKACNTAMSDSANNTMIILENTAGTKNNVGSKFEELKYIFDNIKDKSRIGFCFDTCH 179 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 AFAAGYDL + T F + +G KYL+ +HLND+K G+ +DRH +G+G+IG + Sbjct: 180 AFAAGYDLSSRKSVIDTLDQFNKIIGMKYLKVVHLNDSKGELGNGLDRHQHIGKGHIGEE 239 Query: 243 AFRWIMQDDRFDGIPLILET 262 FR ++++ +PLILET Sbjct: 240 GFRQLLKNPDIKQLPLILET 259 >UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota RepID=END4_NITMS Length = 279 Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 144/259 (55%), Gaps = 1/259 (0%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG HVS +G + + A E + +AF +FT+N R W A LT I FK+ ++ Sbjct: 3 IGCHVSISGSIDKSVDNAVERECSAFQIFTRNPRGWHAKTLTKDDITNFKSKLKESKIDR 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H YL NL P + EKS +DE++RC QLG+ L H GSHL EE + Sbjct: 63 FATCAHMPYLPNLATPKEDGFEKSVKTLVDEVERCAQLGIPYLVTHLGSHL-GTGEEAGI 121 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 ++ + + A V ++ENTAGQ +++G F+ L I ++ + GVC+DTCHA Sbjct: 122 KKLVKGLTEAGKTKNDVMILLENTAGQKNSVGSDFKQLGEIFKQLKPAKKFGVCLDTCHA 181 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 F GYDLRT A+ ++TF++F + VG L+ +HLNDAK G +DRH+ LG G IG Sbjct: 182 FVFGYDLRTEAKVKETFSEFDKYVGIDNLKILHLNDAKGDLGCNLDRHYHLGMGGIGEKG 241 Query: 244 FRWIMQDDRFDGIPLILET 262 I++ IP+ILET Sbjct: 242 ISAIVKFANKKKIPIILET 260 >UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae RepID=END4_PETMO Length = 287 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 146/268 (54%), Gaps = 3/268 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G A I F +FT + R W+ P ++ FK A +++ Sbjct: 1 MIKIGAHMKISKGFTKVPPDTANIGGNTFQIFTSSPRVWKVNPPKENDVEGFKNAMTEFN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +L H SYLINL P + EKS A I+E++ +QLG+ NFHPGSHL + EE Sbjct: 61 INFEDVLVHSSYLINLASPKDDIREKSITAMIEEIKATDQLGILHYNFHPGSHLGE-GEE 119 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + +I E ++I + Q VT ++EN A +GSN+G+ E L II+ K R+G+ Sbjct: 120 FGINKILEGLDIIFKEVQNTKVTILLENVAQKGSNIGYSMEQLGRIINKSPWKERLGITY 179 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH F + YD+R E ++ + + +G L+ +HLND+K G+ DRH +G+G Sbjct: 180 DTCHGFDSNYDIRKKEEVQRLLDEIDKYIGLNKLKMIHLNDSKYDVGAAKDRHEFIGKGY 239 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD 266 IG + F+ + D +PLILET D Sbjct: 240 IGREGFKTFLSFDEISKLPLILETPGDD 267 >UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH Length = 528 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 94/262 (35%), Positives = 144/262 (54%), Gaps = 42/262 (16%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAH+SAA G+ NA + I Sbjct: 153 FVGAHISAAKGVQNAVTNSLYI-------------------------------------- 174 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +LPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ + S E Sbjct: 175 -GHVLPHGSYLVNLAQEDPTKAKQAYDSFLDDLKRCEELGIKLYNFHPGA-TNKASLESS 232 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDT 180 L+R+A+++ AL T V V+E G G+ +G H +++ + + +SR+G+C+DT Sbjct: 233 LSRLAQALVSALKATTTVVPVLETMCGHGTTIGGPLSHFKSLLALIPNTYRSRIGICVDT 292 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH+FAAGYDLR+P+ +F +G +YLR HLND+K+ GSR D H ++G G +G Sbjct: 293 CHSFAAGYDLRSPSSWNSFMEEFDNEIGLQYLRAFHLNDSKTPLGSRRDLHANIGTGFLG 352 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 AF +M D R +GIP+ILET Sbjct: 353 LRAFHNLMNDKRLEGIPMILET 374 >UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=END4_DESDG Length = 294 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 149/263 (56%), Gaps = 5/263 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 + IGAH+SAAGG+ A RA ATA +FT+NQRQW A PL + F AA ++ Sbjct: 13 QLIGAHMSAAGGVHKAVERAEAAGATALQVFTRNQRQWNAPPLEEHDAELFTAAVRRW-- 70 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H SYLIN E E+S DE+QR +LG+ ++ HPG+H Q E Sbjct: 71 GGYPVSSHASYLINPAADTPEGAERSVALMADELQRAGRLGIEMVVVHPGAHKGQ-GEAA 129 Query: 122 CLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 A A ++ AL++ + V ++ENTAGQG+ LG F LAA+I+ R G+C+D Sbjct: 130 GAALAAARLDEALERCGSPAVMVLLENTAGQGTMLGASFAGLAAVIEASRMPERYGICLD 189 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T HAF AGYDLR A + + G LR +H ND+ + GSR DRH +G+G + Sbjct: 190 TAHAFGAGYDLRDAALYDAAIRELDVCAGLDRLRLVHANDSLTGLGSRRDRHTHIGQGEL 249 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 G AFR +M+D+R +P +LET Sbjct: 250 GEAAFRLLMRDERLHHVPKVLET 272 >UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX39_9BACT Length = 278 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/261 (38%), Positives = 145/261 (55%), Gaps = 8/261 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H S G L NA AA + F +FTKNQRQW+ + F+ + + + Sbjct: 3 LGVHCSIKGSLHNAFNEAASLGIDTFQIFTKNQRQWKEKIVGPAEKTIFRETLRQSNIKT 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H SYLINL + + ++ + E+QRC+ LG++ + HPG ++ + Sbjct: 63 --IFSHASYLINLATSDSRIYALTHNSLLGEIQRCDDLGIASIIIHPG-FTKNTGKQTGM 119 Query: 124 ARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + + I L KT V ++ENTAGQGS++G+ F+ L +I+G+ R+GVC DTC Sbjct: 120 KNVIKMIKSVLKKTNNSPVKILMENTAGQGSSIGYHFKQLQQLIEGI-GSGRIGVCFDTC 178 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAGYD+RT E T + TVG L +HLND+K GS++DRH +G+G IG Sbjct: 179 HAFAAGYDIRTKIGFETTMEELDATVGLNSLYAIHLNDSKGALGSKIDRHEHIGQGAIGL 238 Query: 242 DAFRWIMQDDRFDGIPLILET 262 + FR IM + IP ILET Sbjct: 239 EPFRQIM--NTMKHIPKILET 257 >UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Eurotiomycetidae RepID=A2QVN1_ASPNC Length = 436 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 12/249 (4%) Query: 26 ATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEAL 84 AFALF K+QR+W L D+F+ C ++ Y A+ ILPH SYL+NL Sbjct: 38 GNAFALFLKSQRKWDNPALQDDHRDQFRNLCIEHKYDGAKHILPHGSYLVNLAQEDKAKA 97 Query: 85 EKSRDAFIDEMQRCEQLGLSLLNF---------HPGSHLMQISEEDCLARIAESINIALD 135 +++ DAF+D+++RCE LG++L NF HP + Q S + R+A ++ AL Sbjct: 98 KQAYDAFLDDLRRCEALGITLYNFQYIPLPYTPHPTNPANQTSHASAITRLAAALTSALA 157 Query: 136 KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV--EDKSRVGVCIDTCHAFAAGYDLRTP 193 T VT V+E G GS +G I+ + E R+G+CIDTCH+FAAGYDL +P Sbjct: 158 ATSTVTPVLETMCGHGSTIGGYLHEFRDILSQIPKEYHHRIGICIDTCHSFAAGYDLASP 217 Query: 194 AECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRF 253 + +F+ +G +YLR +HLND+K+ GS+ D H ++G G +G AF +M + RF Sbjct: 218 SGFASFMQEFSDVIGIQYLRALHLNDSKAPRGSKRDLHANIGTGFLGLRAFHNVMNEPRF 277 Query: 254 DGIPLILET 262 G+P+ILET Sbjct: 278 QGLPMILET 286 >UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma RepID=END4_THEAC Length = 281 Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/262 (41%), Positives = 145/262 (55%), Gaps = 13/262 (4%) Query: 2 KY-IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 KY IG H+S AGGL N RAA F F+KNQ +W + PL FK+ KY Sbjct: 12 KYTIGGHISVAGGLHNGPARAAVFGFPTFQFFSKNQMRWSSPPLKDDEAAAFKSEVRKYG 71 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 S I H SYLINL + ++S +AF DE+ R ++LG + L HPGS+ Sbjct: 72 IESTMI--HASYLINLASADPDLYKRSMEAFHDEIDRSDKLGSTFLTVHPGSNP---DRA 126 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 D + R+ ++++ D V +IENTAGQG+ +G + + +A IID + K +GVCIDT Sbjct: 127 DGIRRVRDALSTIGD--HAVIILIENTAGQGNVIGTRLDEVAKIIDTSDKK--LGVCIDT 182 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHA+A+GYDLR EK T+G + HLNDAK GSR+DRH +G+G I Sbjct: 183 CHAWASGYDLRD--SLEKFIESLDYTIGLDRIFAFHLNDAKREMGSRIDRHELIGKGTID 240 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 I +DDR P I+ET Sbjct: 241 GGLINLI-RDDRLRAKPKIMET 261 >UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9M8_GEMAT Length = 293 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 111/271 (40%), Positives = 153/271 (56%), Gaps = 11/271 (4%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S AGG AA RA E+ ATA +FTK +W + F+ E TS Sbjct: 14 LGAHMSVAGGSWEAAPRAREVSATAMQIFTKQANRWAEREVDAVEATRFR---EALSATS 70 Query: 64 AQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + HDSYLINL P+ E E+S +F E++RC LGL L HPG+ + Sbjct: 71 VRWCCAHDSYLINLASPMPELRERSVLSFRAELRRCHALGLDALVSHPGNFIDD--RPSG 128 Query: 123 LARIAESINIALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCID 179 +AR A+ I AL+ G T ++ E TAGQG+ LG FE +A ++ + + R+GVC+D Sbjct: 129 IARNADGIIEALEAEPGPTRLLMELTAGQGTVLGSTFEEMADLLSRIPSALRGRMGVCLD 188 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H +AAGYDL + + +A T+GF L +HLND+K+ S +DRH +GEG+I Sbjct: 189 TAHVWAAGYDLIN--AYDDMWTRYADTLGFASLGCLHLNDSKARLASHLDRHDLIGEGSI 246 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAE 270 G D FR IM D+R +P +LET D AE Sbjct: 247 GADVFRRIMTDERLTHVPKVLETPKGDSPAE 277 >UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ellin514 RepID=B9XFU8_9BACT Length = 268 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 101/245 (41%), Positives = 129/245 (52%), Gaps = 5/245 (2%) Query: 20 RAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHP 79 RA I +F KN QW P + + A E A I H YLINLG Sbjct: 5 RAVSITGEICQIFVKNNMQWFGKPYMPDDLRLY--ANEVAANKLASIFGHTGYLINLGAQ 62 Query: 80 VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQ- 138 +E EKS + + E+ LGL L HPG+HL EE + +IA ++ A T+ Sbjct: 63 ASENREKSIKSLVQEINMATDLGLPFLVMHPGAHL-GTGEEAAIKQIAAGLDEAFQATKH 121 Query: 139 -GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECE 197 V +ENTAGQG+ LG + HLA I V R+GVC+DT H F AGYDLRTP Sbjct: 122 SPVRIALENTAGQGTCLGHEIRHLAEIFQKVNRPERLGVCLDTAHFFEAGYDLRTPKGWN 181 Query: 198 KTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP 257 + +G K + HLND+K+ GSRVDRH +GEG IG +AFR I+ D+RF +P Sbjct: 182 AAIGEVENFIGVKQVLAFHLNDSKTDLGSRVDRHAGIGEGKIGREAFRHIVNDERFRDLP 241 Query: 258 LILET 262 LET Sbjct: 242 GCLET 246 >UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix orenii H 168 RepID=END4_HALOH Length = 278 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 100/260 (38%), Positives = 138/260 (53%), Gaps = 4/260 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G HVS AGGL A RA +I A +F KN R W+ ++ I + K +K + Sbjct: 3 LGKHVSIAGGLYKATDRATKIGCNALQIFVKNPRGWKIKEVSDSEIKKLKDNIKKENMYP 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H SYLIN+ P E EKS ++ E +R E + HPGSH + + Sbjct: 63 --LVVHSSYLINMATPRDELWEKSVNSLKKEYKRTELINADYFVVHPGSHTGK-GLHFGI 119 Query: 124 ARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 RI E+IN + + G ++EN AG GS++G F L II+ V+D +R+GVC+DTCH Sbjct: 120 NRIIEAINSVFGEVKNGPQLLLENVAGAGSSIGSNFTELRDIINKVDDYARIGVCLDTCH 179 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 AFAAGYDLR E+ DF + +G L+ +HLND+K S D H +GEG IG Sbjct: 180 AFAAGYDLRYEDGLEELLNDFDKIIGLDLLKVIHLNDSKYGLASNKDEHAHIGEGEIGEK 239 Query: 243 AFRWIMQDDRFDGIPLILET 262 I+ P ILET Sbjct: 240 GISNIINHPLLKDKPFILET 259 >UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae RepID=END4_THENN Length = 287 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 134/262 (51%), Gaps = 1/262 (0%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G +I +F +F N R W+A T + +FK +K+ Sbjct: 1 MIKIGAHMPISKGFDRVPKDTIDIGGNSFQIFPHNARSWQAKLPTDEMATKFKREMKKHR 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H YL+NL P + +KS D E++ C +LG+ LN HPGSHL EE Sbjct: 61 IDWENAFCHCGYLVNLASPKEDIWQKSVDLLKTEVEICRKLGIKYLNIHPGSHL-GTGEE 119 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + RIA +N L+ T+ V ++EN + +G N+G++ EHL IID V+ K RV + DT Sbjct: 120 EGINRIARGLNEVLNNTEDVIILLENVSQKGGNIGYRLEHLKRIIDLVDQKDRVAITYDT 179 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F +GYD+ E ++ G + L+ +HLND+K G+ DRH +G G IG Sbjct: 180 CHGFDSGYDITKKEGVESLLSEIENLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIG 239 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 F +P ILET Sbjct: 240 EAGFAVFFSFKEVQRVPWILET 261 >UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=END4_METMJ Length = 282 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 139/267 (52%), Gaps = 11/267 (4%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG + A RA + F +F++N R W+ L F+AA Sbjct: 1 MVLVGCHVSIAGSIDRAVGRALDAGCDTFQIFSRNPRGWKVKDLDPGLAGAFRAAVSASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL---MQI 117 ++ H YL N P E EKS A E++RC LG+ L H G H M+ Sbjct: 61 I--GPVVDHMPYLPNPASPDAEIYEKSVAALAGELRRCSLLGIPYLVTHLGHHRGAGMEA 118 Query: 118 SEEDCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 +E R+ +IN A + V ++ENTAG+ +++G ++L+ I+DG++ K RVG Sbjct: 119 GQE----RVVAAINRAFEDAGESDVMLLLENTAGEKNSVGTTVDNLSRIVDGIDAKERVG 174 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 +C DTCHAFAAGYDLRT + + + LR +HLND K GS +DRH +G Sbjct: 175 ICFDTCHAFAAGYDLRTAEGVDAVLGEIDDAIDLSRLRVVHLNDCKGDLGSGLDRHEHIG 234 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILET 262 G IG D FR I++ +PLI ET Sbjct: 235 LGRIGEDGFRHILRHPAVRRLPLICET 261 >UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organisms RepID=END4_CLOD6 Length = 278 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/262 (34%), Positives = 147/262 (56%), Gaps = 5/262 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G H+S A G ANAA A I A F F++N R A + I +F+ ++ + Sbjct: 1 MIKLGTHLSIAKGFANAAETAVYIGANTFQFFSRNPRGGNAKEFDEKDIIKFQEIRKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A +L H Y +NLG + E + ++++R + LG+ + FHPGSH+ + Sbjct: 61 F--APLLAHAPYTMNLGGTKDDVYEFATRVIDEDIRRMDSLGIEYMCFHPGSHVGG-GVD 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + RI + +N A+ + +T ++E +G+G+ +GFKFE L +IID +E K ++GVC+DT Sbjct: 118 FGIDRIVKGLNNAIKGDENITILLETMSGKGTEIGFKFEQLKSIIDKIEHKEKIGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F+AGYD+ + + +F + +G + L+ +HLND+ FG + DRH +GEG IG Sbjct: 178 CHIFSAGYDIVN--DLDGVLEEFDKVIGIERLKTVHLNDSMMPFGDKKDRHAPIGEGKIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 A M+ +P LET Sbjct: 236 LKALIDFMEHPSLKHLPFFLET 257 >UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vulgaris RepID=END4_DESVH Length = 282 Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 137/268 (51%), Gaps = 6/268 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+SAAGG++NA EI LFT NQRQW + ++ F + Sbjct: 1 MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVEAFG---RRRA 57 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYLIN+ + A K+ +A + E +RC LG+ + HPG+HL Sbjct: 58 AFGGPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGVDAVVLHPGAHLGAGRGT 117 Query: 121 DCLARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R A +I+ D+ G T V+ ENTAGQG+ LG LA IID S++GVC+ Sbjct: 118 GIL-RAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIIDASRHASQLGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HAF AGY L T + D G +R H+ND+ GSR DRH +GEG Sbjct: 177 DTAHAFGAGYALHTDEGYRRCMEDIEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQ 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD 266 +G AF ++ D F P++LET D Sbjct: 237 LGEAAFVRLLNDPVFAMHPMVLETPKED 264 >UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METPE Length = 286 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 140/267 (52%), Gaps = 9/267 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS AG +A A RA ID F +F++N R W PL + F+ A Sbjct: 1 MVKIGVHVSIAGSIARAVERAMAIDCDTFQIFSRNPRGWTFKPLAEEDAALFQGALGTSG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ-ISE 119 A + H YL NL P E KS +A +E+ RC L + L H G H+ + I Sbjct: 61 IGPAVV--HMPYLPNLASPKEEIWRKSVEALTEELHRCSMLDVPYLVTHLGHHMGEGIGA 118 Query: 120 EDCLARIAESINIALDKTQG----VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 + R+ ++I+ A ++ V ++ENTAG+ +++G +FE + I + D R+G Sbjct: 119 GE--GRVQQAIDAAFSQSDPGSSRVMLLLENTAGEKNSVGSRFEEIGRIRESCSDPDRIG 176 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 VC+DTCHAFAAGYDLR +T F +G ++L +HLNDAK+ GS +DRH +G Sbjct: 177 VCMDTCHAFAAGYDLRNEVGLSRTLEAFEDGIGIEHLHVIHLNDAKADIGSHLDRHTHIG 236 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILET 262 G IG + I+ +P I ET Sbjct: 237 LGMIGEEGCSGILTHPTLASLPFICET 263 >UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVE3_METI4 Length = 321 Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 6/262 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVS AGG ++AA RA A +F KN R+W + + I F + E+ + Sbjct: 44 LGAHVSIAGGFSSAARRACACGFKAAQIFLKNCRRWEEPKIDEKDIVAFVSLKEENNIF- 102 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE-EDC 122 H SYLINL E +KS +A + E+ E+L L + HPG+ + +E Sbjct: 103 --FFGHFSYLINLCSRSKEITQKSLNALVQEIIMAEKLTLPFVVLHPGTIALGKAEISQA 160 Query: 123 LARIAESIN--IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + +N + L K V +E AGQG LG+K E L II+ V+ R C+DT Sbjct: 161 IEVLCGYLNQAVELTKNTAVKIALETMAGQGGQLGWKLEQLREIIERVDSPERFCFCLDT 220 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H + AGY+L+T +KT A +G + +HLND+ S FGS+VDRH +GEG +G Sbjct: 221 AHLWEAGYELKTAGGYQKTMEKIALELGLSRIAAIHLNDSFSPFGSKVDRHAHIGEGTLG 280 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 + FR ++ D RF GIP++LET Sbjct: 281 VEPFRRLVNDSRFLGIPMVLET 302 >UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae RepID=END4_AQUAE Length = 282 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 146/264 (55%), Gaps = 7/264 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAHVS+AG + RA +I A F F ++ R W + +T F EK Sbjct: 1 MALFGAHVSSAGSILKTFKRAKDIGAEVFQFFLRSPRAWYWKGVDKETKQAF---IEKLK 57 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL+NL P E EKS F++E++ C+++G+ NFHPG+ IS+E Sbjct: 58 DFKNPVMVHAPYLLNLASPNEELREKSVKVFLEELKFCDEVGIHFYNFHPGT-AKGISDE 116 Query: 121 DCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L + +S+ + + T ++ENTAG+ +LG F+ L I++ V ++GVC+ Sbjct: 117 EGLRNVIKSLEEVFSEYTPKFTTVLLENTAGERGDLGKNFKELKEIMN-VFRGIKLGVCL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFA GY++ T E + + VG + ++ +H ND+K G R DRH +G+G Sbjct: 176 DTCHAFAYGYEINTKEGFENFKREIEKMVGLESVKAVHANDSKVPLGGRKDRHEHIGKGY 235 Query: 239 IGHDAFRWIMQDDRFDGIPLILET 262 IG + F+ +++D+ F +P +ET Sbjct: 236 IGLEGFKNLLKDEYFSTLPYYIET 259 >UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47D Length = 283 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 94/266 (35%), Positives = 149/266 (56%), Gaps = 13/266 (4%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVS AG + + RAA F +F K+ QW+ P+T + ++ F+ +K+H Sbjct: 13 KLVGGHVSIAGSIGLSPERAAAFGFNTFQIFVKSNLQWKYKPVTEEEVENFRDGVKKFHM 72 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 A+ + H +YL+NLG E +EKS D E++ C ++G+ L HPGS+ + E Sbjct: 73 --AKPVVHATYLLNLGSENRELVEKSMDDIKYEIEVCNRIGVDRLVLHPGSNS---NREI 127 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L I E +N +T VT +IEN++G+G+ + E + ++D K+++G+C+DTC Sbjct: 128 ALNSIMELLNSL--ETGNVTMLIENSSGKGNTVPATSEEMGKMLD--LSKNKIGICLDTC 183 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFK-YLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H FA GYDL+ K D R+ G ++ +H+ND+ GS+ DRH ++G G IG Sbjct: 184 HFFAGGYDLKNGY---KESIDSLRSNGITGHIGALHINDSMFDIGSKKDRHENIGNGYIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD 266 F I+ D F+ IP+I+ET D Sbjct: 241 DAGFSNIINDRTFNNIPMIMETPGGD 266 >UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=END4_ALKOO Length = 281 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 6/285 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G A I+A F FT+N R +A + + ++ E+ Sbjct: 1 MLNIGCHLSSSKGYKAMGKDAISINANTFQFFTRNPRGSKAKAMDLKDVEGLLQLMEENK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A+IL H Y +N E + + +D++ R E L + NFHPG+HL Q E Sbjct: 61 F--AKILAHAPYTLNPCSADERTREFAMEVLVDDLARMEYLPNNFYNFHPGNHLKQ-GVE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I S+N L Q T ++E +G+G+ +G FE L IIDG++ ++VGVC+DT Sbjct: 118 VGIEYIVNSLNDVLKPDQTTTVLLETMSGKGTEIGKNFEELKQIIDGIKLSNKVGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH + AGYD+ + + +F R +G L +HLND+K+ F S DRH +GEG IG Sbjct: 178 CHVYDAGYDIV--QDLDGVIQEFDRIIGLDKLYAIHLNDSKNPFASHKDRHAKIGEGYIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTEKAV 284 + I+ + +P LET N + EEI L+ ++++ Sbjct: 236 EEGIVRIINHPKLRHLPFFLETPNDLEGHGEEIKMLREAYRDESI 280 >UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Z7U8_BRAFL Length = 326 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 74/140 (52%), Positives = 98/140 (70%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA A I+A AF LF ++QRQW P+ F+ ACEK+ + Sbjct: 186 KFVGAHVSITGGIENAVENAVAINARAFGLFLRSQRQWACKPMEESAARLFREACEKHGF 245 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + QILPH SYL+N G P E L KSR+A +DE++RCEQLGL++ NFHPGS +I+ E+ Sbjct: 246 SPDQILPHGSYLLNCGAPNPETLRKSREALVDELKRCEQLGLTMYNFHPGSSCGEITVEE 305 Query: 122 CLARIAESINIALDKTQGVT 141 CL RIA+SIN+A +T GVT Sbjct: 306 CLTRIADSINLAHQQTSGVT 325 >UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=END4_CLOBB Length = 277 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 14/282 (4%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G N A +I A F FT+N R +A + + EF ++ + Sbjct: 1 MLNIGCHLSSSKGFKNMGENALKIGANTFQFFTRNPRGSKAKDIDENDVKEFLELAKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFI----DEMQRCEQLGLSLLNFHPGSHLMQ 116 + +IL H Y +N A E++R+ I D+++R E L +L NFHPGSH+ Q Sbjct: 61 F--CKILAHAPYTLN----ACSADERNREFAIEIMADDLKRMEYLPNNLYNFHPGSHVKQ 114 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 +E + I+ ++N L K Q ++E +G+G+ +G FE +A II VE K VGV Sbjct: 115 GTEVG-IEYISSALNSILKKDQTTKVLLETMSGKGTEVGRNFEEIAEIIKRVELKEHVGV 173 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCH AGYD+ E +K +F +G L +HLND+K+ F S DRH ++G Sbjct: 174 CLDTCHIHDAGYDIVN--ELDKVLEEFNSIIGLDKLDAIHLNDSKNPFESHKDRHETIGN 231 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKA 277 G IG +A I+ + +P LET N + + EI LK+ Sbjct: 232 GYIGLEAVTNIINHPKLCHLPFFLETPNELEGYKNEIELLKS 273 >UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVD3_ALIAD Length = 282 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 148/273 (54%), Gaps = 7/273 (2%) Query: 4 IGAHVSAAG-GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GA+VS AG GL A A F ++T++ R +A P+ T DE A ++ Sbjct: 12 LGANVSVAGTGLLAAVEETISYGANTFMIYTRSNRGGKARPIETFHRDEGLALMREHGIH 71 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H SYL+NL P E + D +E++R E LG + HPGSH+ + E Sbjct: 72 DPVV--HLSYLVNLASPKPETRQYGMDVLREEIERVEYLGFRYIVMHPGSHVGE-GESFA 128 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + +IA+++N L + + +E AG GS +G E +A II V+ + R+ VCIDTCH Sbjct: 129 IRQIADALNEILTGDESLWLCLETMAGDGSKVGNSLEEIADIISRVKHEDRLAVCIDTCH 188 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 ++ GYD+ + + A+F R +G L+ +H+ND+K FGSR DRH ++GEG +G + Sbjct: 189 NYSYGYDVVN--DFDGFLAEFDRVLGLDRLKVVHINDSKHPFGSRKDRHANVGEGTLGLE 246 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 A + I+ GIP ILET + EEI L Sbjct: 247 ALKRIVHHPALKGIPQILETPEGK-YKEEIDLL 278 >UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9W5_THEAS Length = 277 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 145/282 (51%), Gaps = 17/282 (6%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS GG+ A R + A +FTKNQ QW ++P+ + F A Sbjct: 1 MALLGCHVSIEGGVWRAIERGDSLGCRAIQIFTKNQLQWMSSPIPLDVAERFYRAWRASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL---MQI 117 +++ H SYLINL ++S +A E QRC LG+ LL FHPG H Q+ Sbjct: 61 IV--EVVSHASYLINLASHDPVLWKRSVEALTYEAQRCLDLGIGLLVFHPGHHGGAGYQV 118 Query: 118 SEE---DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRV 174 E + ++ E+I + GV ++E +AGQG+++GF + + + R+ Sbjct: 119 GMEWLERGIQQVLEAIPL------GVRLLLEPSAGQGTSVGFVLKDCVELCHRI-GYERL 171 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 G+C+DTCH FAAGYD RTP ++ G + + HLND+K GSR DRH + Sbjct: 172 GLCLDTCHLFAAGYDFRTPGGYDRLLRSLGDR-GTRLVGCWHLNDSKDPKGSRKDRHQRV 230 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 G G IG F+ I+ D RF +P I+E P AE++A L Sbjct: 231 GIGTIGLAPFQMILSDPRFHAVPAIVEA-PPSTVAEDLALLN 271 >UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS22_ACIBL Length = 328 Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/263 (37%), Positives = 134/263 (50%), Gaps = 7/263 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H S+AGG+ AA RA + + +F+ + RQW+ L + + KY Sbjct: 31 IGIHTSSAGGVELAAERAYRLGCSCLQIFSSSPRQWKPFELGRSQCETMSSIRAKYDLNP 90 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H +YLIN+ E +KS +AF E+QR L L HPGS + ED L Sbjct: 91 LVI--HANYLINVAGGNPEFHQKSIEAFRAEVQRGIDLCADYLVLHPGS-FKGATREDGL 147 Query: 124 ARIAESINIALD----KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 R AE+I A+D + + IENTAG +LG FE +A ++ + V CID Sbjct: 148 QRAAEAIEAAVDGLGIEKTNLKITIENTAGSEFSLGGSFEQVAELMARLRKHVPVAACID 207 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGYD+ T EKT TVG K + H NDAK+ GS++DRH +G+G I Sbjct: 208 TCHTHVAGYDITTKKGFEKTLQQLDDTVGLKNVGVFHCNDAKAPRGSKLDRHQHIGQGTI 267 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 G + F+W++ D R I ET Sbjct: 268 GLEPFKWLLNDPRLQHPAFIAET 290 >UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U7_9ZZZZ Length = 285 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 136/260 (52%), Gaps = 5/260 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVSAAGG+ A R EI A A +F + +QW PL + FK + H Sbjct: 3 LGAHVSAAGGIDLAIDRGVEIGAEAVQIFASSNQQWAFKPLDEKQTASFKTKALE-HSIG 61 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 +L H YL+ LG E L + + ++ M LG+ + FH GSH E Sbjct: 62 PNVL-HGIYLVTLGTEEPELLRRGVQSLVNYMNAAHDLGMLGVVFHLGSH-KGAGFEAVF 119 Query: 124 ARIAESINIALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 ++ ES+N LD + T +I EN+AG G+++G KF L ++ V RV VC+DT H Sbjct: 120 RQVVESMNRVLDNSPDDTLLIMENSAGMGNHIGSKFHELGTLLKEV-GSPRVKVCLDTQH 178 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 +FAAGYDL TP T F +G ++L +H ND+K G+ VDRH ++GEG +G + Sbjct: 179 SFAAGYDLTTPEAVAGTLRQFDGEIGLEHLAAIHCNDSKRDLGAGVDRHENIGEGYMGLE 238 Query: 243 AFRWIMQDDRFDGIPLILET 262 AF I+ +P LE Sbjct: 239 AFEAILAAPALRDVPFYLEV 258 >UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penetrans RepID=END4_MYCPE Length = 289 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 146/283 (51%), Gaps = 11/283 (3%) Query: 4 IGAHV--SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDE-FKAACEKYH 60 +G+HV A L + + E D F +FT + + L IDE K EK Sbjct: 8 LGSHVGFKAKNYLVGSVLETLEYDGNCFMVFTGPPQNFMRKELDQNLIDEAVKLMKEKNP 67 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 I+ H YLINLG P + I E+ R Q+ L+ HPGS L Sbjct: 68 LLLENIVVHAPYLINLGSPKESTRSLGLNQLIVEINRTNQIHSKLIVLHPGSAL-DSDRN 126 Query: 121 DCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + IA+++N A++ T V +E AG+GS +G FE ++ I+ GV++K R+GVC+D Sbjct: 127 VAINHIADNLNKAIEATDNDVIICVETMAGKGSEVGINFEEVSKIVSGVKNKKRIGVCLD 186 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH +G D+ P ++T +F++ + Y++ +HLND+K+ GSR DRH ++G G + Sbjct: 187 TCHMHDSGIDISDP---DQTLEEFSKYLDLSYIKVIHLNDSKNEIGSRKDRHDNIGYGKV 243 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWLKAQQ 279 G D +++ +P ILET D I+ +EI L +++ Sbjct: 244 GFDYLVKWAHNEKLANVPKILETPYRDDKPIYKQEIINLNSKE 286 >UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMN6_9BACT Length = 273 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/278 (32%), Positives = 145/278 (52%), Gaps = 11/278 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAH S + + + RA +F KN +W ++ + ++F+ + Sbjct: 3 IGAHQSISKSIDLSIKRALADGCECLQVFVKNNNRWEGKVISEEEAEKFRKGLAD---SG 59 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H SYLINL + KS A DE+ RC++L + HPGSH+ + E+ + Sbjct: 60 FKVCAHSSYLINLASFKEDTYIKSVKACNDELSRCDRLNIPFYVIHPGSHVGE-GEKKGI 118 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 RIA++I+ + ++E AGQG+N+G+ E++ II+ K ++G+C D+CH Sbjct: 119 RRIADTIDRVYEGGYQCMTLLEMVAGQGTNIGYSIENMLDIIELSASKDKIGICFDSCHM 178 Query: 184 FAAGYDLRTPAE--CEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 FAAG+DL+ + ++ F F V + HLND+K SR DRH +G+G IG Sbjct: 179 FAAGFDLKDDYDNVTKELFEAFGDKV-----KVFHLNDSKKPLNSRRDRHELVGKGEIGE 233 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 D F+ + D RF I ILET + + +EI LK+ + Sbjct: 234 DFFKKAVNDARFSDILGILETPVEENYKKEIELLKSYR 271 >UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=END4_CARHZ Length = 283 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 5/278 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H+S AGGL R + +F+++ R A P + + F E+Y Sbjct: 3 VGLHLSIAGGLLKLKERIIKNKTEGVQIFSRSPRGGEAKPFNEKELKGFLEFKEEYKLYP 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H Y++NL P E +KS +++ R +QL L H GSH EE L Sbjct: 63 --LVVHVPYVMNLASPEEEMFQKSVAMIREDLYRSDQLHADFLVVHVGSH-RGAGEERGL 119 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 AR+ E + I L + +IENTAG G+ +G+ +HLA II +G+C+DTCH Sbjct: 120 ARMVEGLKILLSENFKTRILIENTAGSGNEMGYSLDHLAYIISET-GHEELGICLDTCHL 178 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 AAGYD +P +F +G + +H+ND+K GSR DRH +L +G IG + Sbjct: 179 LAAGYDDVSPEGISAFSREFREKIGEERFCLLHVNDSKHPIGSRKDRHENLEQGYIGREG 238 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 F ++ F +P ILET P I E++ LK + E Sbjct: 239 FINLLNSPFFKRVPWILETPEPGI-EEDLVKLKKLREE 275 >UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae RepID=END4_HALWD Length = 278 Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/264 (35%), Positives = 133/264 (50%), Gaps = 12/264 (4%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH S AGG+ANA R E +FT + + W+ + + F+ + + Sbjct: 3 VGAHESIAGGVANAVDRQLENGGNCGQIFTHSPQVWQDPSIDDTDAEAFRDRSQMHDIGP 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H SYL+NL P + KS D+ E+ QL + +N H G+H ++ Sbjct: 63 WVI--HSSYLVNLCTPKDDLRAKSIDSMQQEVDAAAQLSIPYVNVHLGAHTGAGKQQGLD 120 Query: 124 ARIAESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 I+ ALD+ VT ++E+ AG G+ LG KF+HLA +++ E + VC+DT Sbjct: 121 NAIS-----ALDELTIPDSVTVLLESDAGSGTKLGNKFDHLAYVLE--ESTHELEVCLDT 173 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H FAAGYDL TPA T +F TVG L +HLND+K G+ D H +GEG IG Sbjct: 174 AHVFAAGYDLSTPAAVNTTIKEFDTTVGVDNLACVHLNDSKHACGTNKDEHAHIGEGKIG 233 Query: 241 HDAFRWIMQDDRFDGIPLILETIN 264 + D IPL+LET N Sbjct: 234 ESGMEAFINHSAIDPIPLVLETPN 257 >UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4V1_SCHJY Length = 320 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAA 163 ++LN +PGS+ + L +A+ IN A + T+ VT V EN AGQG LG F+ A Sbjct: 85 NMLNINPGSY-ASCEKSQALKNLADCINRAHEATENVTIVTENMAGQGQCLGGVFDDFAE 143 Query: 164 IIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + ++D SR VC+DTCH FAAG+D+RT E+ +F VG +++ G HLND+K+ Sbjct: 144 LKSLIKDTSRWRVCLDTCHTFAAGFDIRTQETYEQVIQEFDEKVGVEFVGGWHLNDSKAP 203 Query: 224 FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTE 281 GS D H +G G +G + FR I+ D R+DGIPL+LET P++WA+EI L A + Sbjct: 204 LGSNRDLHEHIGLGFLGLEPFRLIVNDPRWDGIPLVLETPAEKPEMWAKEIELLTAMIGK 263 Query: 282 KA 283 KA Sbjct: 264 KA 265 >UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3188E Length = 289 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 7/274 (2%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAHVS AGGL NA R E TA +F ++ R WR + F+ A + Sbjct: 3 IGAHVSQAGGLPNAIERGVEKGCTAIQIFNQSPRMWRPTQYSEDDFAAFRDAMAGSPIRA 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H YLIN E KS + ++ + +G S++ HPGS L E + Sbjct: 63 VMI--HAVYLINCASEDPEIRTKSLASLTQSLRVGDAIGASVV-LHPGSALRGHVGE-AI 118 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 AR AL +++ ++E+TAG G LG FE L +ID R+GVC+D+CH Sbjct: 119 ARAGGVFREALAESESSALLLEDTAGAGGTLGRSFEELRELIDAAGGGERLGVCLDSCHL 178 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 A+GYD+RT +T F VG L G+HLND+ + G+ DRH +LGEG +G Sbjct: 179 LASGYDVRTIDGLSETLDRFDAAVGLGRLGGLHLNDSVNALGTNRDRHANLGEGELGETG 238 Query: 244 FRWIMQDDRFDGIPLILETINPD---IWAEEIAW 274 + + RF+ +P++LET PD AEEI + Sbjct: 239 CMAFLSEPRFENLPVVLETPGPDKRGTSAEEIVY 272 >UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DP20_DESVM Length = 300 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 132/265 (49%), Gaps = 12/265 (4%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S AGGL A A + A A +FT NQR+W + F+AA + + Sbjct: 1 MSVAGGLWRAVEHAVSVGAQALQVFTANQRRWEVPCPSDGDARRFRAAVSDW--GGGFVA 58 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM---QISEEDCLA 124 H SYL NL P A +S E+ RC LG+ + HPG+HL + + E + Sbjct: 59 SHASYLFNLASPDEGAGARSVRGLAAEIGRCGLLGIPWVVLHPGAHLEGGDRQAVEHGVH 118 Query: 125 RIAESINIAL-------DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 R+A + A GV ++ENTAGQG+ LG L I+D + R+GVC Sbjct: 119 RVAARLAAAFDAAGHLHPHADGVGVLLENTAGQGTCLGGDVADLGRIVDACPARERLGVC 178 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDT HA AAGYDL T + A VG +R H+ND+ + G+R DRH +G G Sbjct: 179 IDTAHACAAGYDLATEEGYARLMAAVEGAVGLGRVRLFHVNDSATPCGARSDRHAHIGLG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILET 262 ++G F +++D RF P++LET Sbjct: 239 HVGAAGFARLVRDPRFAAHPMVLET 263 >UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCS6_THET1 Length = 296 Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 3/259 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAHV GGL+ A RA EI A +F +QWR + + F A + ++ + Sbjct: 13 IGAHVGIGGGLSKAIPRALEIGANCIQIFVSAPQQWREPAHPDEEVQLFIDAYNQSNFRA 72 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H YL+N P TE EKS + I + ++LG + H GS + E+ Sbjct: 73 --IFLHAIYLLNPAAPNTELREKSISSIISYLHWGKRLGAQGVVIHLGSS-SGTTREEAE 129 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 + S+ ALD T V ++E +AG ++LG F+ LA I+ + D R +C+DT H Sbjct: 130 KNLVNSVKTALDNTDEVPVLLETSAGTKNSLGSTFDDLARILYKIGDTKRAAICLDTAHI 189 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +AAGYDL + +TF +F + +G L+ +H ND G DRH ++GEG IG Sbjct: 190 WAAGYDLSSEDAVNQTFEEFDQKIGLDKLKLIHANDTNVRIGGGRDRHENIGEGIIGERG 249 Query: 244 FRWIMQDDRFDGIPLILET 262 ++ ++ + P ILET Sbjct: 250 WKALLTNPGIRFKPWILET 268 >UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma gallisepticum RepID=END4_MYCGA Length = 303 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 144/291 (49%), Gaps = 15/291 (5%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEID--ATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 +KY+G V A + +D AT+F ++ + +R P +D KA K Sbjct: 6 IKYLGCFVGATKPDFMLGMVKTVVDYGATSFMFYSGPPQSFRRTPTAQFKLDLAKAYLAK 65 Query: 59 YHY--TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 ++ + H YLINL + + E+S + F+DE++R +LG HPGS L Sbjct: 66 HNLGDLGDNYVVHAPYLINLANGDSTKRERSFNFFLDELKRTNELGAKYFVLHPGSALNV 125 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + L +A +N A+ T+ +E A +G + KFE L +ID + DKSR+GV Sbjct: 126 KDKTQALDHLATELNRAISMTKDTIICLETMADKGQQICSKFEELRYVIDQISDKSRIGV 185 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C DTCH AGYDL A+ ++ F + +G KYL +HLND+K+ G+R DRH ++G Sbjct: 186 CFDTCHVHDAGYDL---AKTQELIDHFDQVIGLKYLYVIHLNDSKNPMGARKDRHANIGY 242 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPD--------IWAEEIAWLKAQQ 279 G IG + + +ILET D ++ EEI ++ ++ Sbjct: 243 GKIGFENLLNFIYHKEICNKIIILETPWIDDPIRGEVPLYKEEIEMIRNKK 293 >UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=END4_SOLUE Length = 290 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/268 (36%), Positives = 136/268 (50%), Gaps = 17/268 (6%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H +G L AA+ A ++ A F +F+ + R WRA I AA E++ + Sbjct: 3 LGIHTFTSGSLETAALTAGDLGAATFQIFSASPRMWRARVPDPVQIKLLCAARERFSLSP 62 Query: 64 AQILPHDSYLINLGH--PVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I H +YL+NL PV A KS DAF E+QR +G L HPGS+ EE Sbjct: 63 LVI--HTNYLVNLASLDPVIRA--KSIDAFRGELQRAIAIGAEYLVVHPGSYRGHTVEEG 118 Query: 122 CLARIAESINIALDKTQGV-----TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS--RV 174 +A A + D + G+ T ++ENTAG G +LG KFE L +I D + + + Sbjct: 119 -IAAFALGLR---DASAGLPPHQLTVLLENTAGAGCHLGGKFEELRSIRDLTAELTDLPI 174 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 G C+DTCH AAG+D+ T T +G + H ND++ GS VDRH + Sbjct: 175 GYCLDTCHLLAAGFDIVTAPGLRATLRAAEAVLGLANVHVFHANDSRFPRGSHVDRHAHI 234 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILET 262 GEG IG DAFR I+ + P ILET Sbjct: 235 GEGFIGADAFRRILTHPKLRRKPFILET 262 >UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum rubarum RepID=A3ERM7_9BACT Length = 317 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 5/266 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++G HVS GGLA + R + + +F+ + R W LT ++ F + +K + Sbjct: 16 FLGTHVSIRGGLALSIERGETLGCGSIQIFSHSSRTWAVPALTEAEVNAFVSRHQKS--S 73 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 74 VGPVLMHASYLVNTATSDPEKRKKSAAALEEDWILANRLGVYGLVLHPGSAAGQ-SDAAA 132 Query: 123 LARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + AE I +D+ +G + ++ ENTAG G LG + ++D V+ +VG+C+D+ Sbjct: 133 IRLSAEMIRDTVDREKGGSTLLLLENTAGGGRTLGRDPGTMKQLVDRVDRPEKVGLCLDS 192 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH A+G ++R P E+ + + G +R HLNDA GS DRH +G+G+IG Sbjct: 193 CHLLASGAEIRNPRSYEEVLSAWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSIG 252 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD 266 F +++D RF GIP++LET D Sbjct: 253 LWFFWTLLRDHRFTGIPMVLETPKTD 278 >UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales RepID=END4_STRAW Length = 310 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 13/266 (4%) Query: 4 IGAHVSAAGGLANAAIR-AAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HV AGGL + + A ++ A A +F N R W + +EF+AAC Sbjct: 31 VGGHVPVAGGLHSVGLAYARDLAAEAVQVFVANPRGWATPAGNPRQDEEFRAAC------ 84 Query: 63 SAQILP---HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 +A+ +P H YLIN G +EKS ++ ++R ++G + H GS Sbjct: 85 AAESIPAYVHAPYLINFGSHTEATVEKSVESLRHSLRRGREIGALGVVVHTGSATGGRER 144 Query: 120 EDCLARIAESINIALDKT---QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 LA++ E + LD+ ++E+TAGQG++L + + ++ ++GV Sbjct: 145 SVALAQVREHLLPLLDELTHDDDPYLLLESTAGQGASLCSRTWDFGPYFEALDAHPKLGV 204 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCH FAAG+DL P+ +T TVG L+ +H ND+K G+ DRH ++G Sbjct: 205 CLDTCHIFAAGHDLTGPSGMHQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGS 264 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILET 262 G+IG D FR +M +G+PLI+ET Sbjct: 265 GHIGEDPFRALMTHPATEGVPLIIET 290 >UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae RepID=B7A694_THEAQ Length = 276 Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 148/276 (53%), Gaps = 20/276 (7%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR PL ++ F+A E Sbjct: 1 MVRYGFHLSIAGKKGVAGALEEAMALGLTAFQIFAKSPRSWRTRPLAANEVEAFRALKEM 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 A I H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 AGGMPAVI--HASYLVNLGAE-GELWEKSVMSLADDLEKAAILGVEYVVVHPGSGDPKRV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L +++ +A + + T ++ENTAG G +G +FE LA ++ + + + C+ Sbjct: 118 KEGAL----KALRLAGVRGK-PTLLLENTAGGGEKVGSRFEELAWLL----EDTPLQACL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGYD++ + T D + VG + + +HLND+ FGSR+D+H L +G Sbjct: 169 DTCHAFAAGYDVKEDPKGVLTALD--KAVGLERVPVVHLNDSVGGFGSRIDQHAHLLQGQ 226 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAW 274 IG + + ++ D R G +LET EE AW Sbjct: 227 IG-EGLKGVLLDPRLRGRVFVLETPRS---PEEDAW 258 >UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XQR8_9DEIN Length = 282 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 90/262 (34%), Positives = 141/262 (53%), Gaps = 16/262 (6%) Query: 3 YIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 + G H+S AG G+A A A + + F +F K+ R W+ L ++ F+A E Sbjct: 5 HYGFHLSIAGKQGVAGAVAEAQRLGLSGFQIFAKSPRSWKTRNLGPGEVERFRAGRENLG 64 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A I H SYL+NLG E EKS + D++ + + LG+ L+ HPGS + E Sbjct: 65 HLPAAI--HASYLVNLG-ATGELWEKSIFSLADDLTKAQVLGIELVVVHPGSGEKKRIRE 121 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L ++ +A +G ++ENTAG G +G + E LA +I+G + +GVC DT Sbjct: 122 GAL----RALELAQIGKRGPKLLLENTAGGGERIGSRLEDLAWLIEG----TPLGVCFDT 173 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGY L E E+ + + +G + + +HLND+ +GS +D+H +L +G IG Sbjct: 174 CHAFAAGYPLHL--EPERVIEELDQEIGLERVPLIHLNDSVGAWGSHIDQHANLRQGRIG 231 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 +A R ++ R G ++ET Sbjct: 232 -EALREVVCHPRLRGKLFVMET 252 >UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=END4_STAS1 Length = 296 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 138/262 (52%), Gaps = 8/262 (3%) Query: 4 IGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G+HVS G L +A A + + F ++T + R P+ I++ + + Sbjct: 3 LGSHVSMNGKKMLEGSAEEAHKFGESTFMIYTGAPQNTRRKPIEELNIEKGHEIMKAHGL 62 Query: 62 TSAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ I+ H Y+IN+ + V E + E++R + LG + HPGSH+ + ++ Sbjct: 63 SN--IVVHAPYIINIANTVKPHVFELGVEFLQSEIERTQALGAQDIVLHPGSHVGEGTDA 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + +I E +N L V +E AG+GS +G FE LA IIDGV R+ VC DT Sbjct: 121 -GIKKIIEGLNEVLTNDNNVRIALETMAGKGSEVGRNFEELARIIDGVNHNDRLSVCFDT 179 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH AGY+++ + + +F + +G ++ +H+ND+K+ G+ DRH ++G G IG Sbjct: 180 CHTHDAGYNVK--EDFDGVLNEFDKIIGVDRIKVVHVNDSKNDIGAHKDRHENIGFGYIG 237 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 DA +++ D F IP ILET Sbjct: 238 FDALNYVVHHDTFKDIPKILET 259 >UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID=END4_MOOTA Length = 279 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 15/280 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S A GL A A I A F FT+N R A + + I ++ A + Sbjct: 3 LGAHLSIAKGLPRTAAMATSIGANTFQYFTRNPRGGAARQIPGKEIQAWREARRR----- 57 Query: 64 AQILP---HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 A + P H Y +NLG E +R D+ R + L HPG + + + Sbjct: 58 ADLYPIAGHLPYTVNLGAAAERQQEFTRMVLHDDTLRVAAIDGEYLISHPGHY--EGERQ 115 Query: 121 DCLARIAESINIA-LDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L RI + I A L T G ++E AGQG +G + L I++G+ RVGVC+ Sbjct: 116 AGLDRIIQLIEEAYLSITPPGPMLLLETMAGQGKEVG-TIDDLCYILEGLGWPDRVGVCL 174 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 D+ H FAAG+DLRTPA C++ + A +G ++ MHLND+ + GS DRH +G+G Sbjct: 175 DSAHLFAAGWDLRTPAGCQQLVQELAAKIGLDRVKAMHLNDSAAPLGSHRDRHAGIGKGE 234 Query: 239 IGHDAFRWIMQDDRFDGIPLILET--INPDIWAEEIAWLK 276 +G + ++ D +PL LET N + + EEIA ++ Sbjct: 235 LGREGIAAVVNDPFLGELPLFLETPVANYEEYGEEIALIQ 274 >UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriaceae RepID=D2RYB0_9EURY Length = 289 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/284 (32%), Positives = 134/284 (47%), Gaps = 21/284 (7%) Query: 4 IGAHVSAAGG-------------LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTID 50 +GAHVS +G L NA R +FT + + W ++ + D Sbjct: 3 VGAHVSISGSRVSSDDETPPYDDLRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISDEAAD 62 Query: 51 EFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP 110 F+ E + H +YL+NL P + KS+++ E+ QLG+ +N H Sbjct: 63 GFRE--ESDERLEGPWVIHSAYLVNLCTPKDDLRRKSKESMQAELDAAAQLGIPYVNVHL 120 Query: 111 GSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED 170 G+H E L A I+ L+ + V +IE+ AG G+ LG +F HLA IID E Sbjct: 121 GAH-TGAGVEGGLDNAASLID-ELEVPEDVQILIESDAGSGTKLGGEFSHLAGIIDRTE- 177 Query: 171 KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR 230 + +G+CIDT H AG DL TP ++T F VG +YL +HLND+K G+ D Sbjct: 178 -TDIGICIDTAHTLVAGNDLTTPEAVDETVGRFDDEVGLEYLEYIHLNDSKHDVGTHKDE 236 Query: 231 HHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAW 274 H +GEG IG D + I+ +P LET D + AW Sbjct: 237 HALIGEGYIGEDGMKAIVNHPDLRDLPFALETPTED--GKGFAW 278 >UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Tax=Paracoccidioides brasiliensis RepID=C1GRM8_PARBA Length = 485 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 3/155 (1%) Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 PG+ +Q + E L+R+++++ ALD T V V+E G G+ +G +++ + Sbjct: 177 PGA-TIQTTLESSLSRLSKALTSALDATTRVILVLETMCGHGTTIGGSLSDFKSLLSLIP 235 Query: 170 DK--SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 D +R+G+C+DTCH+FAAGYDLR+P K +F +G K+LR +HLND+K+ GSR Sbjct: 236 DTYHARIGICVDTCHSFAAGYDLRSPGAWNKFMKEFDEEIGLKFLRALHLNDSKTPLGSR 295 Query: 228 VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 D H ++G G +G AF +M + R +GIP+ILET Sbjct: 296 RDLHANIGTGFLGLRAFHNVMNEKRLEGIPMILET 330 >UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=END4_SULSY Length = 279 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 14/268 (5%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS++ L R E++A++ F ++ R W T + + F +K Sbjct: 1 MVNIGTHVSSSKSLDLVFERGKEVEASSIQFFIRSPRSWAWIERTDEEKERF--LQKKNE 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y ++ H SYL NL E +KS ++ I E++ CE+L + H G ++ Sbjct: 59 YKIHPLVVHASYLFNLASFEEELYKKSIESVIQELKLCEELKIDYYVIHAGKSKGNPKKQ 118 Query: 121 --DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 D + R E I L+ + T ++E AGQ +G E + +I+ E++ ++GVC+ Sbjct: 119 AIDRILRAFEEIFSRLN-LKNTTFLVETLAGQSGEVGATLEEVYTLIEPFENE-KIGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFAR-TVGFKYL---RGMHLNDAKSTFGSRVDRHHSL 234 DTCH FA+GY + T ++ F F + + + L + +H ND+K+ F S+ DRH + Sbjct: 177 DTCHIFASGYQINT----DEGFNSFKKELIDYNLLEKTKVIHCNDSKAPFNSKKDRHEHI 232 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILET 262 G+G IG + FR + DD F+ +P ILET Sbjct: 233 GKGFIGLEGFRIFLNDDDFNKLPFILET 260 >UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermophilus RepID=END4_THET2 Length = 270 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/284 (35%), Positives = 147/284 (51%), Gaps = 24/284 (8%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR L+ ++ F+A E Sbjct: 1 MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 A I H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 SGGLPAVI--HASYLVNLGAE-GELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L +++ +A +++ V ++ENTAG G +G +FE LA ++ + + VC+ Sbjct: 118 KEGAL----KALRLAGVRSRPVL-LVENTAGGGEKVGARFEELAWLVA----DTPLQVCL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFAD-FARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCHA+AAGYD+ AE D R VG + + +HLND+ GSRVD H L +G Sbjct: 169 DTCHAYAAGYDV---AEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQG 225 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETIN---PDIWAEEI--AWLK 276 IG + + + D R ILET D W + AWL+ Sbjct: 226 KIG-EGLKRVFLDPRLKDRVFILETPRGPEEDAWNLRVLRAWLE 268 >UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQQ7_9BACT Length = 318 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 5/266 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++G HVS GGL + R + + +F+ + R W + + F + +K + Sbjct: 17 FLGTHVSIRGGLVLSLERGETLGCGSIQIFSHSSRTWDLPSIPDGEVHAFVSRHKKS--S 74 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 75 VGPVLMHASYLVNTATSDPEKRKKSARALKEDWVLANRLGVYGLVLHPGSAAGQ-SDAAA 133 Query: 123 LARIAESINIALDKTQGVTA--VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + A+ I +D +G + ++ENTAG G LG + +++ ++ +VG+C+D+ Sbjct: 134 IRLSAKMIRDTVDMEKGGSTRLLLENTAGGGRTLGRDPGTMKQLVERIDRPEKVGLCLDS 193 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH A+G +LR P CE+ + G +R HLNDA GS DRH +G+G+IG Sbjct: 194 CHLLASGAELRNPRSCEEVLLSWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSIG 253 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD 266 F +++D R+ GIP +LET D Sbjct: 254 LWFFWNLLRDRRYTGIPKVLETPKTD 279 >UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SAA5_9ACTO Length = 296 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 6/265 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAE-IDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 M IGAH+ GGLA + + + A A +F N R WR P + F A C + Sbjct: 1 MPPIGAHIQIKGGLATGGLAYTDAVAARAVQVFVGNPRGWRLTPGDPRQDARFTAGCAER 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 S H +L+N+G P +E+S + R QLG + H GS + + Sbjct: 61 GVPS---FIHTPFLVNVGSPTEATVEQSVATIAHNLARGAQLGCRGVVVHAGSAVGEDRY 117 Query: 120 EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ED L ++ E + L+ G ++E TAG G +L E L +E +GVC Sbjct: 118 EDALRQLHERLLPVLEAAPDDGPRLLVEPTAGGGRSLAATVEDLGPYFAALEHHPLLGVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCHA+AAG++L P T TVG L +H ND+ GS+ DRH ++G G Sbjct: 178 FDTCHAWAAGHELTVPGGMAGTLDALEATVGPGRLGLVHANDSLDECGSKRDRHTTIGAG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILET 262 +IG F ++ G+P+++ET Sbjct: 238 SIGVAPFAELLAHRSVAGVPVVVET 262 >UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium RepID=END4_BIFLI Length = 284 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 21/286 (7%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 YIG+H+S AGG R+ E TAFA F ++ R+ L F A + Y Sbjct: 5 YIGSHLSTAGGWNALLERSHEEGGTAFAFFPRSPYGKRSKALDPADAATFGARLKAEDY- 63 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAF--------IDEMQRCEQLGLSL-LNFHPGSH 113 ++ H Y+ NL ++++ AF I+ + + G + +N HPG+H Sbjct: 64 -GPLVVHAPYVYNLA-----GKDEAKRAFAIEALAEDIELLTAIREAGQEVYINIHPGAH 117 Query: 114 LMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + Q ++ C I+E +N ++T GV ++E AG+G+ G FE LA I++GV++K+ Sbjct: 118 VGQGTKTGC-QLISEGLNQVFERTTGVMVLLETMAGKGTECGRNFEELATIMNGVKNKAN 176 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 VGV DTCH AGYDL + + +G ++ +H+ND++ S DRH + Sbjct: 177 VGVTFDTCHVLDAGYDLVN--DYDGVMRQLDEAIGLAKVKAIHVNDSQFGLDSHKDRHAN 234 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKA 277 +G+G +G F ++ D +P+ILET P +EI L+ Sbjct: 235 IGQGQLGIPFFTRLVNDPIMAKLPMILETKEQTPATHRDEIELLRG 280 >UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METLZ Length = 281 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 5/269 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG L A RA E F +FT++ R W A P+ + F A Sbjct: 1 MIKLGFHVSIAGSLPLAVSRAQEAGCDTFQIFTRSPRVWAAKPIEPSIAEAFIDALNISG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL N E +S +E+ RC+QL + L H G H + + Sbjct: 61 I--GPVVDHMPYLPNPAAEKPEIYARSIFTMTEELDRCDQLKIPYLVTHLGHHGKEDGHK 118 Query: 121 DCLARIAESINIALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 ++ +I ALD+++G T ++ ENTA + + +G F + I D + ++ RVG C D Sbjct: 119 KGQEKVIAAIGQALDESEGETMILLENTANEKNTVGGTFTDIGVISDALSNERRVGFCFD 178 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 TCHA AAGYDL+ E F F G L+ +HLND K GS +DRH LG G Sbjct: 179 TCHAAAAGYDLKGHG-AETVFGWFNDEAGSLDRLKVIHLNDMKGGVGSHLDRHEHLGLGY 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI 267 +G + ++ + I+ET + +I Sbjct: 238 LGEETIHDVLTFPKISHCAFIMETPSDEI 266 >UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putative n=1 Tax=Brugia malayi RepID=A8PDB3_BRUMA Length = 371 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 59/119 (49%), Positives = 85/119 (71%), Gaps = 1/119 (0%) Query: 157 KFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMH 216 +FE L II+ V++K RVGVC DTCH FAAGYD+R+ ++TF++F T+G +YLR H Sbjct: 231 QFEELQQIINLVKNKKRVGVCFDTCHIFAAGYDIRSEDRYKETFSEFENTIGLQYLRAFH 290 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 +ND+ GS++DRH ++G+G + AFR ++ D RFDG+P+ILET D +AEE+ L Sbjct: 291 INDSMGDLGSKLDRHANIGKGKLKLAAFRNLIADQRFDGLPMILETPEGD-YAEEMIRL 348 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACE 57 K +GAHVS AGGL + A I +FA F +NQR W + P+ + + F+ + Sbjct: 176 KMLGAHVSVAGGLEQSFYNALSIGCRSFAFFVRNQRSWNSPPIKAEVVQAFRETAQ 231 >UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces RepID=D1XGI6_9ACTO Length = 279 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 7/259 (2%) Query: 8 VSAAGGLANAAI-RAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQI 66 + AGGLA + A E+ A A +F N R W P + F++ C + S Sbjct: 1 MPVAGGLAKIGLGYAKELAAEAVQVFVANPRGWATPPGNPAQDELFRSRCRE---ESIPA 57 Query: 67 LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI 126 H YLIN G +E+S + ++R ++G + H GS E LA++ Sbjct: 58 YVHAPYLINFGSHTEATVEQSVRSLRHSLRRAREIGAQGVVVHTGSATGGRPREVALAQV 117 Query: 127 AESINIALDKT---QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 E + LD+ ++E+TAGQGS+L + + ++ ++GVC+DTCH Sbjct: 118 RERMRPLLDELTHDDDPFLLLESTAGQGSSLCSRTWDFGPYFEALDSHPKLGVCLDTCHI 177 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +AAG+DL PA +T TVG L+ +H ND+K G+ DRH ++G G+IG Sbjct: 178 YAAGHDLTGPAGMRQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGAGHIGAAP 237 Query: 244 FRWIMQDDRFDGIPLILET 262 F+ I DG+PL++ET Sbjct: 238 FQEIFAHPATDGVPLVIET 256 >UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium thermophilum RepID=END4_SYMTH Length = 276 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 91/278 (32%), Positives = 137/278 (49%), Gaps = 11/278 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H+S + G A A + AF FTKN R ++ + +A +Y + Sbjct: 3 LGCHISISKGFPQAVENAHRLGCEAFQFFTKNPRGFKGKSADPEAAARGRALMAEYGLVA 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H Y+ NL P E S + +++ E G H G H+ + E Sbjct: 63 ---VAHAPYITNLSTPDPELQAISIASLKQDLENAEAYGAIGCVCHMGKHVGE-GEAYGR 118 Query: 124 ARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 AR+ E++N L+ G ++ENTAG GS LG E L + VE R+ C DTCH Sbjct: 119 ARMVETLNRLLEAYTGSCPLLLENTAGMGSELGTHLEELMEVRSRVEQPERIAFCFDTCH 178 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGF-KYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 AFAAG + P + E F AR +G+ LR +HLND+K GSR DRH +LG+G +G Sbjct: 179 AFAAG--IYRPEDWED-FVAHARAIGYWGLLRAVHLNDSKFDHGSRKDRHANLGKGFLGE 235 Query: 242 DAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKA 277 +++ F+G+P++LET D + EIA+ ++ Sbjct: 236 AGIATLLRSGAFEGLPVVLETPVKDEAEYGPEIAYARS 273 >UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX RepID=Q47NI0_THEFY Length = 293 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 136/285 (47%), Gaps = 13/285 (4%) Query: 4 IGAHVSAAGGLANAAIRAAE-IDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHV +GGLA + A+ I A +F N R W P + +A T Sbjct: 9 IGAHVPVSGGLAKRGLSYADAIGAEVIQVFVTNPRSWAHTPGNAEQDALLRA------RT 62 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YLINLG P E +S + +QR Q+G + H GS ++ Sbjct: 63 DLPVFVHACYLINLGSPDEEIAARSVASLKYTLQRAAQIGARGVVVHTGS-AVRGGRAAG 121 Query: 123 LARI-AESINI--ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LAR+ A + I ALD+ ++E AGQG L + LA +D V+ + GVC+D Sbjct: 122 LARVRARLLPILEALDEA-APPVLLEPMAGQGQVLCATVDDLADYLDAVDRHPKAGVCLD 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H F AG+D+ T A F VG LR +H ND+ + GSR DRH +G G I Sbjct: 181 TAHVFGAGHDVSTRAGMRTMLDRFGEVVGADRLRLVHANDSAAPCGSRRDRHAGIGLGYI 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPD-IWAEEIAWLKAQQTEKA 283 G D F + G+P+++ET P+ A ++A LK + + A Sbjct: 241 GADPFAEVFTHPVSAGVPVVVETPGPEGPHARDVATLKELRAQAA 285 >UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID=END4_MYCGE Length = 291 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 15/291 (5%) Query: 2 KYIGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 K +G+ +S A +A A IDATA +F P + Sbjct: 3 KLLGSFISFKAPNYFVQSAQDAIAIDATALMVFLGPPHSAYRVPFNKMQFSLGYELLKTK 62 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + S ++ H Y+IN + + +E+Q C G L HPGS + Q + Sbjct: 63 NINSNGLVVHAPYIINCASKDPLKQQNAISVLTNEIQLCNLAGAHYLVLHPGSAVAQTTN 122 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E L + + +N ++KT+ +E AG+G+ +G L +ID + DK R+GVC+D Sbjct: 123 E-ALDNLVKVLNQVINKTKTTVICLETMAGKGNEIGRDLTELKYVIDRIVDKDRIGVCLD 181 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH +G D ++ F +GF++L+ +HLN++K+ GS+ DRH ++ G I Sbjct: 182 TCHFHDSGIDF---SDLTGVFNTITTKLGFEFLKVIHLNESKNNCGSKKDRHANINAGMI 238 Query: 240 GHDAFRWIMQDDRFDGIPLILETIN-----PDIWAEEI----AWLKAQQTE 281 G + + + +P+ILET + P I+ EEI +W K Q + Sbjct: 239 GFENLMKFISHPQIKDLPIILETPSTSLNYPTIYREEISQIRSWFKTYQPD 289 >UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiroplasma citri RepID=Q14M87_SPICI Length = 308 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 18/289 (6%) Query: 4 IGAHVSA---AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 IG+HVS L A + +A A ++T + I EF +K+H Sbjct: 8 IGSHVSMNKQQNYLLGALNESLNNNANAMMIYTGPPQNTIRVSTEQFFIPEFYQQLKKHH 67 Query: 61 YTSAQILPHDSYLINLGHPVTEA-LEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + I+ H Y+INL + + E + + +E+ R +++G+ + HPGS + E Sbjct: 68 FDINNIIIHAPYIINLANTTNPSTFEIAVEFLKNEITRADEIGIKTIVLHPGSGV-GAPE 126 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + L +I E +N+ L Q +E AG+GS LG F L IID V+ ++GVC D Sbjct: 127 QVGLDQIIEGLNLVLTPNQKAKIALETMAGKGSELGTSFAQLKYIIDNVKLNDKLGVCWD 186 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY R + +F + +G L +H+ND+K+ + DRH ++G G + Sbjct: 187 TCHMHDAGY--RLTEALDDIIIEFEQLIGLNRLLCLHINDSKNPLNAHKDRHENIGYGYL 244 Query: 240 GHDAFRWIMQDDRFDGIPLILET---------INPDIWAEEIAWLKAQQ 279 G + I+ + DG+ ILET + P + +EIA +KA+ Sbjct: 245 GFETLLKIIYHPKLDGMIKILETPYVGEKKHAVAP--YKDEIAMIKAKN 291 >UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermaceae RepID=END4_PERMH Length = 285 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 8/271 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVS++ L R EI A F + R W + + + F +K Sbjct: 1 MVKIGAHVSSSKSLDLVFDRGREIGADTIQFFLSSPRSWHWKERSDEEKELF---IQKRR 57 Query: 61 YTS-AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 T + ++ H SYL NL +KS + I E++ CE+L + H G + E Sbjct: 58 ETGISPVIAHSSYLFNLASSDPVLRKKSINGVIRELKLCEELKIDYYVIHAGKS-KGLKE 116 Query: 120 EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + + I +S+ K + + E AGQ +G + LA +++ + K GVC Sbjct: 117 SEAVKNIIDSVKEIFSKVKLKHTFFLYETLAGQKGEIGKTTDELAQLMEPFK-KENTGVC 175 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH ++AGY + ++ ++ +G + ++ +H ND+K+ F S+ DRH +GEG Sbjct: 176 VDTCHIYSAGYKINDEEGFYSYRSELSKKIGLENVKVIHCNDSKTPFNSKRDRHEHIGEG 235 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIW 268 +IG+ F + + D+ F +P ILET W Sbjct: 236 SIGYKGFEFFLNDEYFRRLPFILETPKTADW 266 >UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=END4_NATTJ Length = 284 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 12/264 (4%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H+ +GG+ RA+E+ +F+ N W+ +T ++ D F E+ Sbjct: 3 LGFHMPLSGGVGKQLNRASELGMECIQIFSGNPTSWKPGKITPKSRDLFIKKQEEL---- 58 Query: 64 AQILP---HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 QI P H YLINL P + EKS +++ + + H GSH+ + E+ Sbjct: 59 -QIKPLVFHTPYLINLASPKNDIREKSIYLLNAALEKAKAYDAPYVVTHIGSHVGEGVEK 117 Query: 121 --DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 D ++ E I D +GV ++ENT+G GS LG L IID +G C Sbjct: 118 GIDLVSYSLEKI--MEDWPEGVELLLENTSGAGSTLGGSLTELKKIIDKFSGTQVLGCCF 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HA+ AGYD+ E E T +G ++ H ND GS DRH +GEGN Sbjct: 176 DTAHAWGAGYDISNVKEVETTLELVNEQLGLDLIKVCHANDTNVPLGSTKDRHQHIGEGN 235 Query: 239 IGHDAFRWIMQDDRFDGIPLILET 262 I + F ++ D F +I+ET Sbjct: 236 ITDEGFGALLTHDSFTPKAVIMET 259 >UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03SD7_LACBA Length = 309 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 21/290 (7%) Query: 4 IGAHVSAAGG--LANAAIRAAEIDATAFALFT---KNQRQWRAAPLTTQTIDEFKAACEK 58 IG+HVS G L +A AA+ F ++T +N R+ L F AA E+ Sbjct: 6 IGSHVSMKGKEMLLGSAQEAAQYGENVFMIYTGAPQNTRRKSIEGLNIPAAKTFMAAHEQ 65 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFID-EMQRCEQLGLSLLNFHPGSHLMQI 117 +I+ H Y++NLG+ V A + +F+ E+QR LG + HPG+H+ Sbjct: 66 R-----EIVVHAPYVVNLGNTVKPANFQFAISFLTAEVQRAAALGAKQIVLHPGAHVGAG 120 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + I V +E AG+G+ +G FE LAAIID ++ VC Sbjct: 121 APAAIAQIAQGLDTILTAAESPVQIALETMAGKGTEVGRSFEELAAIIDAPPHNDQLSVC 180 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH AGY + T + + +F +G L+ +HLND+K+ GS DRH ++G G Sbjct: 181 FDTCHTSDAGYAIAT--DFDGVLNEFDHVIGLDRLKVVHLNDSKNPQGSHKDRHTNIGLG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILET--INPD------IWAEEIAWLKAQQ 279 +G D + + +P I+ET I PD E+A LK QQ Sbjct: 239 TLGFDVLNAVAHHPQLTTVPKIMETPVIGPDRKHGVNPHGYEVAMLKHQQ 288 >UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC86_GEMAT Length = 299 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 84/268 (31%), Positives = 136/268 (50%), Gaps = 8/268 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWR-AAPLTTQTIDEFKAACEKY 59 M +G+H GG+ AA RA A +F+ + + + + + ++ A E Sbjct: 1 MLLLGSHCLDEGGIPMAARRAGRAGMQALQVFSAVPKFYNDKVGVKPERLARWQEALEIA 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 ++ H +Y++N P E ++ E +R LG+ + FHPG+ Sbjct: 61 GIRPEHVIVHAAYVLNCATPDEEKWARAAAGLAKEFERSTTLGVKGVCFHPGAA-TDGDR 119 Query: 120 EDCLARIAESINIALDKT-QGVTAV-IENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVG 175 + +AR++E++ AL +G T + IENTAG G+ +G E + A++ G+ D+ R G Sbjct: 120 DAAIARVSEAMRRALAAVPEGRTRLLIENTAGAGTTVGRTPEEVGAMLRGIPAADRHRTG 179 Query: 176 VCIDTCHAFAAGYDL-RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 +DTCH FA+G+ + + A + F + G + +HLND++ GS DRH + Sbjct: 180 YGLDTCHLFASGFPIAESRAALTEVLDAFEQATG-EPPAFLHLNDSEGACGSNKDRHRCI 238 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILET 262 GEG IG F W++QD R GIPLILET Sbjct: 239 GEGLIGATPFGWLLQDRRAQGIPLILET 266 >UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID=END4_CLOPH Length = 300 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 135/268 (50%), Gaps = 14/268 (5%) Query: 1 MKYIGAHVSAAGGLA--NAAIRAAEIDATAFALFT---KNQRQWRAAPLTTQTIDEFKAA 55 M IG+HV +G A +A A DA F ++T +N R+ + L + EF Sbjct: 1 MLKIGSHVGMSGKEAFFGSAKEAHSYDANTFMVYTGAPQNTRRKDISDLRLEEGFEFM-- 58 Query: 56 CEKYHYTSAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 K H S I+ H Y+INLG+ V + + D EM+R + L HPG+H+ Sbjct: 59 --KQHGIS-DIVIHAPYIINLGNSVNLDTYSLAVDFLAKEMERTKAFRSKYLVLHPGAHV 115 Query: 115 MQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRV 174 + + +I + +N L + + +E AG+GS +G FE LA I DGV+ R+ Sbjct: 116 -GAGVDAGIKQIVQGLNEVLTRDTDLYIALETMAGKGSEIGRNFEELARIYDGVKYNDRL 174 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 VC DTCH AGYD+ + + F + +G + + H+ND+K+ G+ DRH ++ Sbjct: 175 RVCFDTCHTNDAGYDVVN--DFDGVIEQFDKLIGKEQIAVFHINDSKNDRGASKDRHENI 232 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILET 262 G G +G DA +I+ F +P ILET Sbjct: 233 GFGTLGFDAISYIVHHSDFIEVPKILET 260 >UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna RepID=END4_FINM2 Length = 277 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 12/283 (4%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S + GL + EI+A F F +N R ++ + + ID+F K H Sbjct: 1 MNRIGCHLSTSKGLHKTIEQCLEINADTFQFFPRNPRGSKSRLIPKKEIDKF-LELRKIH 59 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE-MQRCEQLGLSLLNFHPGSHLMQISE 119 + +I+ H +Y +NL E L K I+E M++ + + ++ HPGSH Q E Sbjct: 60 NIN-KIVCHGAYTMNLCSD-REDLRKLAVKLINEDMKKIQDMRINHYVLHPGSHKNQGIE 117 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E L I E IN +D + G IE +G+GS LG + +A II+ + VCID Sbjct: 118 EG-LKLIVEGIN-KVDVSNGQMICIETMSGKGSELGCDIDQIAYIINNAS--IPLYVCID 173 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH F++G L + +F + +G ++ +H ND+ FG+ DRH G+G I Sbjct: 174 TCHLFSSGIRLDN---FDDYLDEFDKKIGIDKIKVIHCNDSMMPFGANKDRHEKFGKGLI 230 Query: 240 GHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 G ++ ++R P+ILET N D + EI ++ E Sbjct: 231 GEQDLFNVIFNERLKDRPIILETPNDLDGYKIEIEEIRRNFNE 273 >UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID=END4_MYCAP Length = 278 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 37/292 (12%) Query: 1 MKYIGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M +G+H+S + L AA + A ++ AP TT+ + + EK Sbjct: 1 MIKLGSHISFKSPNYLLGAAAESVNNKANCMMIYL-------GAPQTTK-----RVSVEK 48 Query: 59 YHY-----------TSAQILPHDSYLINLGHPVTEALEK-SRDAFIDEMQRCEQLGLSLL 106 Y Y T I+ H Y++N P + + K + D + E+++ +G L Sbjct: 49 YKYNEYLEKYSKLITPDDIIVHAPYIVN---PSSVSKNKFAIDFLVQEIEKMNYIGAKYL 105 Query: 107 NFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIID 166 HPGS+ S ++ L S+ L +T+ V +E AG+G+ +G F+ + I Sbjct: 106 VLHPGSY-TTFSVQESLDTFIASVKQILSRTKDVVICVETMAGKGAEVGINFDQINYFIH 164 Query: 167 GVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS 226 + + R VC+DTCH F AGYD+R E + A+ + +++ +HLND+K++ GS Sbjct: 165 KIRN-DRFAVCLDTCHIFDAGYDIRKYEEFK---AEINKYNLLPHIKVIHLNDSKNSLGS 220 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWL 275 DRH ++ +G IG + + D FD IP+ILET N I+ +EI L Sbjct: 221 HKDRHANIDKGFIGLETLAKFVHDPDFDNIPIILETPWVDNKPIYDQEIKML 272 >UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepID=END4_UREU1 Length = 304 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 5/262 (1%) Query: 4 IGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS A + A A ++T + R P+ I+E ++++ Sbjct: 8 IGSHVSLKANDFFYGSVKEALSYGANTLMVYTGAPQNTRRQPIELFKINEAHNLLKEHNI 67 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H Y+IN E +++ I E++R + +G++ + HPGS L Q E+ Sbjct: 68 DLNNLIVHAPYIINPCSSKKYVRELAKEFLIQEIERTQFMGITKIVLHPGSCLDQ-DEDI 126 Query: 122 CLARIAESIN-IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L ++ +N I V +E +G+GS +G + L IID V+ K +GVC+DT Sbjct: 127 ALKQVYTMLNEIFATINTNVVVCLETMSGKGSEIGINLKQLKTIIDNVDSKKNIGVCLDT 186 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH +G L + + +F +G Y++ +H+ND+K+ G+ DRH +LG G IG Sbjct: 187 CHMSDSGIALDHDS-FNQYLKEFDAQIGIDYIKVLHINDSKNPRGANKDRHENLGYGTIG 245 Query: 241 HDAFRWIMQDDRFDGIPLILET 262 D I+ + IP ILET Sbjct: 246 FDNLINIIYHPLLNNIPKILET 267 >UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID=END4_MYCCT Length = 289 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 8/263 (3%) Query: 4 IGAHVSAA---GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +G HVS L + A A F +FT + I++ Y Sbjct: 6 LGCHVSMNKQNNYLVGSVNEAISYKANTFMIFTGPPQSTLRTNTNHLYINQMHELMNSYK 65 Query: 61 YTSAQILPHDSYLINLGHPVTE-ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + ++ H Y+IN+ + V + E + + I E++RCE++ + L HPGS+ + Sbjct: 66 IDAKDLVVHAPYIINIANSVDQNKWEFAVNFLIQEIKRCEEIKIPTLVLHPGSYTTG-NY 124 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 +D L +I +++++ + V +E +G+G+ + K E I+D V++K +VGVC+D Sbjct: 125 KDSLNQIIKALDMVSNYQVNVKIALETMSGKGTEVCSKLEDFKYILDNVKNKDKVGVCLD 184 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGYDL E ++ + + +HLND+K+ S DRH ++G G + Sbjct: 185 TCHLHDAGYDLSKWTEFKE---QIKQNFNLDKVLCIHLNDSKNMISSHKDRHANIGYGFV 241 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 G D ++ D F I ILET Sbjct: 242 GFDTLVNVVFDKDFSNISKILET 264 >UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus RepID=Q6L051_PICTO Length = 273 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 34/273 (12%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S G+ N A ++ AF +F K R W+ I F+ K++ Sbjct: 8 LGAHISIGNGIENVPEIAHSMNFNAFQIFVK-SRSWQEKEYKYDEIANFRNNVRKFNIEG 66 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H YLINL E +KS + +E++ C LG+ L HPGS+ + Sbjct: 67 T--VAHAIYLINLASE-NEIRKKSINDLNNEIKICNDLGIDYLVVHPGSNPDR------- 116 Query: 124 ARIAESINIALDKTQGVTA-----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + I +A+D Q + +IEN++G+G+ ++ IID + DK G+C+ Sbjct: 117 ---KKGIKMAIDAFQSMETGSTKILIENSSGRGNTFPSDINEMSGIIDSL-DKKHFGLCL 172 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKY----LRGMHLNDAKSTFGSRVDRHHSL 234 DTCHA++ GYDL C+ + DF +G K + +HLND+K+ F S+ D H + Sbjct: 173 DTCHAYSYGYDL-----CK--YDDFIYYMGKKLELSRINVIHLNDSKTEFASKKDLHENP 225 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINPDI 267 G G IG R I D F I+E+ PDI Sbjct: 226 GSGRIG-SCLRSIFYDRNFKDSTFIMES--PDI 255 >UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_MYCHP Length = 283 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 33/290 (11%) Query: 1 MKYIGAHVSAAG-----GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAA 55 M +G+H+S G N AI E F ++ AP + +D Sbjct: 1 MIKLGSHISFKKPDYLIGSFNEAINNGE---NCFMIYL-------GAPQSAFRVDSSLYN 50 Query: 56 CEKYHYTSAQILP------HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH 109 EKY I+P H Y++NL + E ++ E++R G LL H Sbjct: 51 IEKYLKQCNSIIPVSDIVVHAPYIVNLAN--REKVDFGIKFLCSEIKRMNSFGAKLLVLH 108 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 PGS + + S + LA + +S+ ++ T+ V +E +G+GS + F L +I V Sbjct: 109 PGSSV-EYSRSEALASLIQSLKKIIESTKDVIICLEIMSGKGSQICSNFNDLLYVIKSV- 166 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRV 228 + R+ +C+DTCHA+ AGYD++ + F + + +R +HLND+ + GS+ Sbjct: 167 NSERIAICLDTCHAWDAGYDIKD----YENFKSYIKQQNILPLIRVIHLNDSMNELGSKK 222 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWL 275 DRH ++ +G+IG + + + D FD IP+ILET N + +EI L Sbjct: 223 DRHANIDKGHIGLEILKKFVHDKDFDNIPIILETPFINNKSPYKDEIIML 272 >UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Tomato big bud phytoplasma RepID=Q8KTG2_TOBBP Length = 208 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 5/161 (3%) Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H Y+INL +P E E S + E+ R Q+ + + HPG++L + ++ + + IA+ Sbjct: 47 HAPYIINLANPSLEKREFSINFLTQELNRFSQMKIPQMVLHPGNNLHK-NKSEAIYWIAQ 105 Query: 129 SINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 IN T + I E AG+G+ +G FE L IID +EDK+R+ +C DTCH F A Sbjct: 106 GINKIFSNTPNLKTKIALETMAGKGNEIGANFEELKNIIDLIEDKTRISICFDTCHVFDA 165 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 GYD++ + E T F + + KYL +H+ND+K+ GS+ Sbjct: 166 GYDIKN--QFENTIKKFDKIINLKYLSVIHINDSKNCLGSK 204 >UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phytoplasma RepID=END4_AYWBP Length = 292 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 18/220 (8%) Query: 69 HDSYLINLGHPVTEALEKSRDAF-ID----EMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H Y+INL +P +K++ AF ID E++R + ++ + HPG++L + + ++ + Sbjct: 71 HAPYIINLANP-----DKTKRAFAIDFLSQELERFAAMKINKMVLHPGNYL-KTNPQEGI 124 Query: 124 ARIAESINIALDKTQGVTAVI--ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + IA+S+++ KT+ + I E AG+G+ +G + E L I V++K+RV C+DTC Sbjct: 125 SLIAQSLDLIFAKTKHLKTQISLETMAGKGTEIGKRLEELQQIRTLVKNKTRVSFCLDTC 184 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H F AGYDL+ E+ +GF+ + +H+ND+K+ S DRH ++G G IG Sbjct: 185 HLFDAGYDLK--ENLEEIIQKIDSILGFQNVSVIHINDSKNECNSHKDRHENIGFGKIGF 242 Query: 242 DAFRWIMQDDRFDGIPLILET--IN-PDIWAEEIAWLKAQ 278 + I+ F IP ILET IN + + EI +K + Sbjct: 243 ETLLKIIYHRAFVCIPKILETPYINEKEPYKHEIEMIKTK 282 >UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWW5_RUBXD Length = 289 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 134/292 (45%), Gaps = 42/292 (14%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H+ +GGL RAA++ A +F N + W P + D A K Sbjct: 8 IGRHLPTSGGLKRTLERAAQLGCEALQIFVSNPQGWAPPP---ERPDAGVLARGKLGAGL 64 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC- 122 ++ H YLINL P E E+S A E+ +LG L+ H GSH + E Sbjct: 65 CPVVAHAKYLINLSSPDGELRERSVRALAAELVAAGRLGADLVVVHAGSHGGEGEERGME 124 Query: 123 -LARIAESINIALDKTQGVTA---------VIENTAGQGSNLGFKFEHLA--AIIDGVED 170 LAR LD +G+ A V+EN+ G G+ L F L A + GV Sbjct: 125 RLAR-------GLDAARGLAASLGGRAAEPVVENSCGAGTQLCSSFAALGRLARLAGVR- 176 Query: 171 KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRG----MHLNDAKSTFGS 226 VC+DT HAF AGYDL TP + A A +G ++L G +HLNDA++ GS Sbjct: 177 -----VCVDTAHAFVAGYDLSTP----EGAAGVAGELG-EHLDGRVALLHLNDARNGLGS 226 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLK 276 R D H +GEG I +F + G+P ++ET P+ A EI +K Sbjct: 227 RRDGHAKVGEGRIPPGSFAALFAA--LPGLPAVMETPYGTPEEDAREIERVK 276 >UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFN4_THEYD Length = 280 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 14/266 (5%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M+ +G H S + NA A + F +F + R W+ + I++FK ++ + Sbjct: 1 MRPLGVHTSIKESILNAIEEAKNLQCETFQIFLHSPRIWKIPEFEEEIIEKFKKKIQENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + H SYLINL + + S+ E+ + LG H + ++ E Sbjct: 61 LSPFVV--HASYLINLISSNPKTINSSKYLLKREVLMSDLLGADYYVIHLKDN-REMQNE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + ++ E+ + + K Q +IENTA S + + L + ++ GVCIDT Sbjct: 118 EIFDKVREAFS-KIGKLQKCKILIENTAK--SKITARISDLFDTFKNINTENVSGVCIDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVG----FKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 CH FAAGYD+ EK ++F V F ++ +HLND+K++ GS +DRH +G Sbjct: 175 CHLFAAGYDISN----EKVISEFIEEVKNFGDFNLIKLIHLNDSKASVGSGIDRHEHIGR 230 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILET 262 GNIG F + +PLILET Sbjct: 231 GNIGIKGFENFFKIKEISHVPLILET 256 >UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBK5_BREBN Length = 280 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 120/264 (45%), Gaps = 15/264 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G HVS G AA A A++F F KN R P + + +A C++ S Sbjct: 3 VGCHVSIRHGYGEAARTAYNEGASSFQFFPKNPRSLGIKPFDARDAERCRAFCQQNGMLS 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H Y +NL E + + ++++ E G + H G Q D L Sbjct: 63 ---IAHTPYPVNLCVEEQELFAVTVGSVRNDLEIAEACGALGVVVHFG----QYKGADVL 115 Query: 124 AR---IAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 A + + +N LD G +IEN AGQG+ +G E L + + +VG C+D Sbjct: 116 AGYKFMIQMVNQILDGWNGKAQLLIENNAGQGNRMGTTLEELTQVRQLFAEPQKVGFCLD 175 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 TCHAFA+G AD R + F LR +HLND+ GS DRH S+G+G Sbjct: 176 TCHAFASGL---WKGNDWGEVADRMRELEYFTSLRAVHLNDSVYPSGSFRDRHASIGKGM 232 Query: 239 IGHDAFRWIMQDDRFDGIPLILET 262 IG A +Q G+P++LET Sbjct: 233 IGDAAIATFLQTPELQGLPIVLET 256 >UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=END4_MIMIV Length = 312 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 16/283 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H++ + G +A A I + F +F +Q + + EF K+ Sbjct: 22 IGRHINISKGFVSAPEYAKNIGCSVFQIFLGAPQQILSKARQKDELIEFGKQLIKHDLI- 80 Query: 64 AQILPHDSYLINLGHPV-TEALEKSRDAFIDEMQRCEQLGLSLLN--FHPGSHLMQ--IS 118 ++ H SY INL HP ++ E S + + ++ +G L H G ++ + ++ Sbjct: 81 --MVVHGSYTINLCHPPGSKKFETSIKSLVKDLNATNLIGDRCLGVIIHMGKNISENKLT 138 Query: 119 EEDCLARIAESINIALDKT-QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVG 175 + + I AL +T T V+E A QGS + + LA I + D + RV Sbjct: 139 VDQAIDNYVTGIKTALSQTPDNTTIVLETGASQGSEVASHIDGLAQIYWCLNDAERERVY 198 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 CIDTCH +A GYD+ +P +K F +F + +G + + +H ND+K+ S+VDRH L Sbjct: 199 FCIDTCHIWATGYDISSPTGVKKFFKEFDKKIGVEKISCIHFNDSKTGLESKVDRHADLC 258 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILET----INPDIWAEEIAW 274 G IG + + I + + I LI+ET INP+ +EI++ Sbjct: 259 YGEIGSNGLKAIAKFAKEYKIHLIMETPLDAINPET-NQEISY 300 >UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V616_9AQUI Length = 156 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 12/136 (8%) Query: 131 NIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 N++L T T ++E AGQ +G + + A+I E ++ +GVC+DTCH ++AGY + Sbjct: 1 NVSLRNT---TFLVETLAGQKGEIGKTTQEIKALIQPFESEN-IGVCLDTCHIYSAGYKI 56 Query: 191 RTPAECEKTFAD----FARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRW 246 EK F D F +G ++ +H ND+K+ F SR DRH +G+G+IG F + Sbjct: 57 NK----EKGFQDYKDEFDTLIGLDKIKVIHCNDSKTPFNSRKDRHEHIGKGSIGLKGFEF 112 Query: 247 IMQDDRFDGIPLILET 262 + D+ F +P ILET Sbjct: 113 FLNDEYFCRLPFILET 128 >UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788006 Length = 282 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 22/269 (8%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTID-EFKAACEKYHYT 62 IG+HVS GG AA AA I + A+ F KN R L +T D AAC K+ Sbjct: 7 IGSHVSTRGGFLAAAQHAAGIGSLAYQYFPKNPRS-----LHLKTPDVRNAAACAKFCQE 61 Query: 63 SAQI-LPHDSYLINLGHPVTEA---LEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + + H Y N+ +T + + D+ +++ E G + H G HL + Sbjct: 62 QGLVSIAHTPYPTNMAVGLTRGEAFYQLTVDSLKNDLMIAEACGSLGIVVHFG-HLKSEN 120 Query: 119 EEDCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + I +N L G +IEN AG ++G E + + ++G C Sbjct: 121 VLEGYQNIIRCMNDVLSSWTGRAKLLIENQAGDHGSMGMTLEESVKVRQLADYPEKIGFC 180 Query: 178 IDTCHAFAA-GYDLRTPAECEKTFADFARTVGFKYLR---GMHLNDAKSTFGSRVDRHHS 233 +DTCH FAA G+DL E AR Y +HLND+K GSR DRH Sbjct: 181 LDTCHLFAAGGWDLSNTDEL------LARGKELAYWESAVAVHLNDSKYGAGSRKDRHAR 234 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILET 262 +G+G IG +A + ++ G +LE+ Sbjct: 235 IGQGMIGTEALKRLVLAPELAGKAFVLES 263 >UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus RepID=B8DYW4_DICTD Length = 287 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G H+ G I+ I+ LF+ + R +R T + + F + S Sbjct: 24 LGVHLFRGGRSILEDIKLLRINTAQ--LFSGSPRSYRP---TNEKLPVFP-------FNS 71 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H Y++N+ P + S I+E++ E+L L HPGS ++ +E Sbjct: 72 VFI--HAPYVVNIASPDEKVFNLSIKKVIEELKLAEELEWEGLIIHPGSS-KKMGKEVAK 128 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +++ L++ ++EN+AG+G G E +I E+ + CIDTCH Sbjct: 129 RNFFKALEKILEEDIKAKLIVENSAGEGDGWGSTLEDFYSI---HEEFPSIYFCIDTCHL 185 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 FAAGY+L+ P C++TF F + + L +H+ND+ GS D+H +G+G IG Sbjct: 186 FAAGYNLKNPRVCKETFYSFFERIPVEKLVLIHINDSHFPLGSHRDQHAHIGKGAIGIGG 245 Query: 244 FRWIMQDDRFDGIPLILET 262 F+ ++ IPLILET Sbjct: 246 FKNLLSIPEIRKIPLILET 264 >UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus RepID=C6CUT5_PAESJ Length = 276 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 23/269 (8%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 YIG H+S G A+AA A AF F KN R + + C++Y Sbjct: 2 YIGRHLSIKEGYASAAKAAYSGGINAFQYFPKNPRSLGLKSFDRREAERCAELCKQYDIL 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEM---QRCEQLGLSLLNFHPGSHLMQISE 119 + + H Y NL + +++ ++ ++++ C +G+ + H Sbjct: 62 T---IAHSPYPTNLASEREDVRQRTVESLLNDLDIANSCGSIGVVV-------HFGVYKG 111 Query: 120 EDCLA---RIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 ++ LA I +S+N + G +IE +G+ + +G E LA I + +++ Sbjct: 112 KEPLAGYQSIIQSLNEVTSRWNGNAKLLIEIQSGEHTFMGTTIEELAQIRGLCAEPAKLA 171 Query: 176 VCIDTCHAFAAG-YDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRVDRHHS 233 C+DTCH FA+G + T AE K A ++G +++ +H ND+ G+R DRH + Sbjct: 172 FCLDTCHMFASGLWHGETDAEWLKK----AVSLGVLEHVAAVHFNDSMFAAGARRDRHAA 227 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILET 262 LG G+IG +W+M G+P ILET Sbjct: 228 LGSGHIGEAGLKWLMSVPALAGVPFILET 256 >UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZK8_ACIFD Length = 278 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 114/260 (43%), Gaps = 10/260 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G HVSAAGG+ RA E A+ F + R WR + D + A ++ Sbjct: 3 VGCHVSAAGGVLKMLERAGERGASVAQCFLGSPRSWRWSVGVAPEPDVVREAAQRAGVE- 61 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 +I+ H SYLINL + ++S E +G + H GS + Sbjct: 62 -RIVVHASYLINLASVDAKLRDRSLALLRQTAIAAEGIGAESVVVHAGSAPGD-DPDAAR 119 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 RI E + L+ T + ++EN A GS E L A+ + K RVGVC+DT H Sbjct: 120 QRIREGLERVLEATSTIRILVENPA-TGSVASGPAE-LGALAGALRTK-RVGVCLDTQHL 176 Query: 184 FAAGYDLRTPAECEKTFADF-ARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FA G+ + A E+ A V H ND+ S G DRH ++GEG IG + Sbjct: 177 FAVGWAIDEAAGREEIVTALQAAQVPVAL---WHCNDSASERGRGRDRHANIGEGAIGAE 233 Query: 243 AFRWIMQDDRFDGIPLILET 262 A ++ D R ++LE Sbjct: 234 ALCSLVADRRLPEADVVLEV 253 >UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Antonospora locustae RepID=Q6E690_ANTLO Length = 194 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 8/152 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S + G+ + + A A+F K+QR + + + + F+ E + Sbjct: 50 VGAHLSISKGIHTVQEQMDMLKAHTCAMFLKSQRTYNFKKIKDEDVSRFR---EHVRFPE 106 Query: 64 AQILPHDSYLINLGHPVTEALE-KSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPH SYL+NL +P E + K D +D+++RC LG+ + N HPGS + ++ Sbjct: 107 L-ILPHASYLVNLANP--EVMSGKGFDVLVDDLERCNLLGIKMYNIHPGSDVNKLG-RGA 162 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNL 154 L ++E++N L V ++EN AGQGS L Sbjct: 163 LELVSENLNRVLSIVPNVMVLLENMAGQGSVL 194 >UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseillevirus RepID=D2XAT9_9VIRU Length = 299 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 41/288 (14%) Query: 4 IGAHV--SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G+H+ S+ G+ + I + ++ + L+ N + + + + + F+ + +K Sbjct: 5 VGSHIPFSSKFGVCKS-IESIDLPLDCYQLYISNPKAFSSTEYNEKDLLSFRESGKK--- 60 Query: 62 TSAQILPHDSYLINL-------GHPVTEA-LEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 + H S + NL G P + LE +R ++ C +G L H G+ Sbjct: 61 ----LFVHASLIYNLCGSKEGEGCPKYQRNLEFTRKGLSYDLDVCALMGAKGLVVHVGA- 115 Query: 114 LMQISEEDCLARIAESINIALDKTQGVT----------------AVIENTAGQGSNLGFK 157 + E C ++AE+++ L++ +T ++EN AG+G+ LG Sbjct: 116 -AKDREWGC-RKVAETVDFVLNQKSKLTDRYSEILGRDIRKERVLILENCAGEGTKLGRD 173 Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAG-YDLRTPAECEKTFADFARTVGFKYLRGMH 216 L I +++K + CIDTCH FA+G D T +K + D+ + L H Sbjct: 174 IPELFTIWSLIQNKEQTRFCIDTCHGFASGTMDFGTTKGIKKFWKDWDENFPRESLCLFH 233 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHD---AFRWIMQDDRFDGIPLILE 261 LND+K G +VDRH +L G I D + ++ + IPL+LE Sbjct: 234 LNDSKGVLGCKVDRHETLLCGRIWEDKAQVLSYFLEGAKEREIPLVLE 281 >UniRef50_C4HXN1 Endonuclease IV n=2 Tax=cellular organisms RepID=C4HXN1_YERPE Length = 53 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/52 (71%), Positives = 44/52 (84%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEF 52 MK++GAHVSAAGG+ A IRA E++ATAFALFTKNQRQWRAAPL I++F Sbjct: 1 MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAEDVIEKF 52 >UniRef50_UPI000190C7DE endonuclease IV n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190C7DE Length = 55 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/42 (85%), Positives = 38/42 (90%) Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 F WIMQD RFDGIPLILETINPDIWAEEIAWLKAQQ +A+A Sbjct: 14 FVWIMQDARFDGIPLILETINPDIWAEEIAWLKAQQIAEAMA 55 >UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8U6_COPPD Length = 269 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 32/291 (10%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M Y G H++ + G + E+ +F +F ++ W P+ + + F++ E+ Sbjct: 1 MVYTGIHLNISDGTDAILKQIDELQIDSFQIFLESPLSW--TPM--KGLYRFESLIERAR 56 Query: 61 --YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLS-----LLNFHPGSH 113 + + H YL++L P KS +++ LG+ L HP Sbjct: 57 NDFGVKTVFVHSPYLVHLASPRGSVRTKSWKKLKEDLSLASDLGIDGYVAHLDMQHPEQE 116 Query: 114 LMQISE-EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 L+ + E L+ I+ +I + L+ V G++ F + + Sbjct: 117 LVFLEEYSRYLSMISSNIPLLLENVAAAKFV-------GADPYFVLD----VARQASTSY 165 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 +C+DT H AAG+D+ E +K F + A + R +HLND K+ GS D H Sbjct: 166 PAAICLDTAHLAAAGFDILQILE-DKRFEELALRI-----RVVHLNDLKTPIGSSRDVHE 219 Query: 233 SLGEGNIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTE 281 +LGEG+IG+ + +++ +G +ILET PD + +A LK E Sbjct: 220 NLGEGSIGYGPLKKMVRAQN-NGTSIILETPQDKPDNNRKNVAVLKKMLVE 269 >UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=END4_MYCMM Length = 252 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 102/237 (43%), Gaps = 26/237 (10%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG+HVS LA A AE+ +F N + W+A P + + KAA + Sbjct: 3 IGSHVSPQDPLAAAQAEGAEV----VQIFLGNPQSWKA-PKPREDAAQLKAA-------A 50 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H YLINL + SR +G + + H G +++++ L Sbjct: 51 LPIYVHAPYLINLASANNKVRIPSRKILQQTCDAAADIGAAAVIVHGG----HVADDNDL 106 Query: 124 ARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + ALD+ Q V +ENTAG + F+ +A + D + D +G C+DTCH Sbjct: 107 DEGFQRWRKALDQLQTDVPVYLENTAGGEHAMARHFDTIARLWDVIGDTG-IGFCLDTCH 165 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 A+AAG L + K V H ND++ GS DRH +LG G I Sbjct: 166 AWAAGEQLVHGVDRIKAVTGRIDLV--------HCNDSRDAAGSGRDRHANLGAGQI 214 >UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepID=A1SQS6_NOCSJ Length = 269 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 115/281 (40%), Gaps = 34/281 (12%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLT-TQTIDEFKAACEKYHYT 62 IGAHV A +A A RA E+ F F + + ++ + KA E Sbjct: 9 IGAHVDQADPIAEA--RAREMPHVQF--FLGDPQGYQGPEFRYAGGAEALKADAEA---A 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE-- 120 + H Y++N+ SR + +G L H G H+ + + Sbjct: 62 GVGLYVHAPYIVNVATTNNRIRIPSRKLLQQHVDAAASIGARGLIVH-GGHVNKDDDPEK 120 Query: 121 --DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV---EDKSRVG 175 D + E++++ L +IENTAG + + E + + D + E VG Sbjct: 121 GFDNWRKAIEAVDLKL------PLLIENTAGGDNAMTRYLERIGRVWDAISSAEQADLVG 174 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 C+DTCHA A G L T D R G L +H ND++ F S DRH SLG Sbjct: 175 FCLDTCHAHAGGNSLET------VVDDVRRITGRIDL--VHCNDSRDAFDSGADRHASLG 226 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWL 275 G + D +++D G P++LET P + AWL Sbjct: 227 AGQVDPDLLAAVVRD---AGAPVVLETPGGPAEHRADAAWL 264 >UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 Tax=Frankineae RepID=D2S816_9ACTO Length = 270 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 39/263 (14%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 + A G LA RAAE+DA LF + + W+A E + ++ Sbjct: 20 LDAGGPLA----RAAEMDADGVQLFLADPQGWKAP--------EPRPDAADLLAGDVTVV 67 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE-------- 119 H Y++N+ SR + +G + H G H++ + Sbjct: 68 VHAPYVLNVATTNNRIRIPSRKLLAAHAKAAAAVGAVGMVVH-GGHVLAKDDPAAGVDNW 126 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 AR AE L +IENTAG G+ + + LA + D V + G +D Sbjct: 127 RKTFARQAEDGGFPL------PLLIENTAGGGNAMARDLDALARLWDAVGEFG-AGFVLD 179 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCHA+AAG+DL T + D G L +HLN+++ GS DRH L +G I Sbjct: 180 TCHAWAAGWDLATAVD------DVRAITGRVDL--VHLNNSRDPQGSSRDRHAPLADGEI 231 Query: 240 GHDAFRWIMQDDRFDGIPLILET 262 +++ R P++LET Sbjct: 232 ---PTELLVEVARSADCPVVLET 251 >UniRef50_B8PE96 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8PE96_POSPM Length = 320 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 36/53 (67%) Query: 210 KYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 +YLRGMHLND+K S+ DRH ++G G +G AF ++ D R +PLILET Sbjct: 169 QYLRGMHLNDSKGALSSKKDRHENIGLGELGLAAFAHVLADPRTRYLPLILET 221 >UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLM2_HYPBU Length = 283 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 10/203 (4%) Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H Y IN P + +EKSR+ I ++ + + FHPG + S E+ L R E Sbjct: 68 HAPYFINFASPDKQTVEKSRERLIASVRAASWMNAYAVVFHPGYYKGNSSPEEALQRTIE 127 Query: 129 SINIALD---KTQGVTAV--IENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 ++ ++D + QG+ V T G+ + +G E + AI + +R V HA Sbjct: 128 NLR-SVDEYIEQQGIKGVWIAPETTGRTAQVG-SVEEVVAICRELRH-ARPAVDWAHIHA 184 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHD 242 + G + + + + R +G ++ +H + +K +G ++ HH+L EG G D Sbjct: 185 RSLGKHVVSVDDVVRIVEYIERELGTWAVKPLHTHFSKIGYGEGGEKEHHTLAEGEYGPD 244 Query: 243 AFRWIMQDDRFDGIPLILETINP 265 +R + + + GI ++ + +P Sbjct: 245 -WRIVCRAYKNLGIEAVVISESP 266 >UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacterium acnes RepID=Q6A5M4_PROAC Length = 251 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 16/174 (9%) Query: 66 ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 ++ H +++IN+ SR + ++G + H G + + + + Sbjct: 62 LVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGG----HVRAGEPIEK 117 Query: 126 IAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS---RVGVCIDTC 181 ++ A+D + V +ENTAG + + E L+ + + S VG C+DTC Sbjct: 118 GQDNWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTC 177 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 HAFAAG D+ + D R + + + +H ND++ GS DRH +LG Sbjct: 178 HAFAAGLDM-------ASLVDDVRGITGR-INLVHANDSQGAVGSGRDRHANLG 223 >UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endonuclease, similar to Rattus norvegicus GB:M13962 and Caenorhabditis elegans GB:Z47812 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVX5_MSEPV Length = 603 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 17/172 (9%) Query: 113 HLMQI--SEEDCLARIAESINIALDKTQGVTA-----VIENTAGQGSNLGFKFEHLAAII 165 HL +I S+E + I S+ K + VI T+ ++G E LA I Sbjct: 90 HLTKIVDSKEKSINTIVSSLEKLSSKLDSLNLNTFNYVIIETSNIVDHIGSTIEDLALIY 149 Query: 166 DGVED--KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + + K+RV CIDT H F Y + T F +G + +HLND++ Sbjct: 150 NKLSSHTKNRVRFCIDTAHIFNTYYAINTVKGIVDYLIKFDVLIGLNKVVAIHLNDSEGM 209 Query: 224 FGSRVDRHHSLGEGNIGHD------AFRWIMQDDRFDGIPLILE--TINPDI 267 S + H S+ EG I +D I + IP ILE TI D+ Sbjct: 210 PLSSIRPHISITEGKIFYDYKSKLSPLHIIKLFSLYYNIPCILERKTITDDL 261 >UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMJ6_AMEPV Length = 612 Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 143 VIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDTCHAFAAGYDLRTPAECEKTF 200 +I T +LG K E + D ++ K R+ CIDT H F Y++ T Sbjct: 137 IIFETTNDIRHLGAKTEDFKILYDNLDSNAKKRIKFCIDTSHIFVTFYNINTVKGMINYL 196 Query: 201 ADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 A F +G + +HLND+ S H ++G+GNI Sbjct: 197 AKFDLLIGLDKIILIHLNDSCGLPLSSYKPHEAIGKGNI 235 >UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL2_9BACT Length = 159 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 5/149 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 + G HVS AGGL R + +F+ + R W + ++ + A + Sbjct: 14 LPRFGLHVSTAGGLDRIFARGEALACGTVQIFSHSSRSWEFSLPDEPLLETYAGARSRAS 73 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ I H SYLIN+ + KS + E+ LG L HPGS Sbjct: 74 FSDVFI--HASYLINMASEDPDIARKSVETLEKELSTARLLGAKGLVLHPGSA-RGGDRP 130 Query: 121 DCLARIAESINIALDKTQGVTA--VIENT 147 + R A I LD+ G ++ENT Sbjct: 131 KAVQRAASRIREVLDRVPGEAPPLLLENT 159 >UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8T0_BREBN Length = 273 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 25/179 (13%) Query: 87 SRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE---EDCLARIAESINIALDK-TQGVTA 142 +RD +D M+RC ++ L H H ++ + E AR E+++ AL T ++A Sbjct: 85 TRDQTLDTMKRCLEIASFLDCTHVVMHAGEVEDRLAETERARGVENVSQALHVLTSELSA 144 Query: 143 ------VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAEC 196 +EN LG+ E L I V + SRVG+ D HA L P Sbjct: 145 ESRTILTVENVPPYPKVLGWSVEDLMRICRHV-NSSRVGIVYDVGHAH-----LIRPG-- 196 Query: 197 EKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 +A A YL +HL+D FG ++D H ++GEG I + +++D+ F G Sbjct: 197 ---YAIDALQKVLPYLSALHLSD---NFG-KLDDHLAVGEGTIPFEPILSLLKDNGFAG 248 >UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_CALS8 Length = 286 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM---QISEEDCLAR 125 H Y IN G E L+KS++ + ++ +++ + FHPGS +I+ E Sbjct: 68 HAPYYINFGSQEEEKLQKSKEYIYECVEVAKEMRAERIVFHPGSCAKVDRKIAFETAKKA 127 Query: 126 IAESINIALD-KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH-- 182 I E +N+ + K +G+ E T G+ +NLG + II+ + + ID H Sbjct: 128 ILEVVNVVREMKVEGIFLCPE-TMGKKNNLG----SVDEIIEICKIDEFLLPTIDFGHIN 182 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 AF G L+T + F +G++ +R H + ++ + S+ ++ H Sbjct: 183 AFTGG-GLKTKEDFVNLLKKFIEQLGYERMRRFHSHFSRIEYTSQGEKKH 231 >UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 Tax=Bacteria RepID=B9M9L1_GEOSF Length = 259 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 27/209 (12%) Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP----GSHLMQI 117 T ++ H +Y + LGHP E E + +AF +Q +LG +N HP H Sbjct: 55 TGLGVIGHTAYYLPLGHPFEEVREGAVEAFSSTLQILARLGACCMNIHPDFKAPMHDAAF 114 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 S E L I E + +A + + +IEN G +++ L AI +G+ Sbjct: 115 SVEQNLKSIRELLPLA--RRLDMELMIENLPGNVNDVPQLGHFLEAI-------PELGLH 165 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +D H +R T + G + +R +HL+D + T D H LG G Sbjct: 166 LDIGH---TNLQVR-----HNTTSSIMEHYGHR-VRHVHLHDNRGT----DDLHLPLGAG 212 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD 266 + ++ ++ +DG + LE PD Sbjct: 213 TLDLESCIRSLKAAGYDGT-ITLEVFTPD 240 >UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine fever virus RepID=APE_ASFP4 Length = 296 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 21/163 (12%) Query: 88 RDAFI-----DEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTA 142 R AF+ E+ C+++G+ L H G+ + E I E + + +GV Sbjct: 89 RSAFVTHFIQQELLICKEVGIKGLVLHLGA----VEPE----LIVEGLK-KIKPVEGVVI 139 Query: 143 VIENTAGQGSNLGFK-FEHLAAIIDGVEDK--SRVGVCIDTCHAFAAGYDLRT---PAEC 196 +E + + E + + + + ++G+CIDT H +++G ++ + + Sbjct: 140 YLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQW 199 Query: 197 EKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 ++ + + ++ HLNDA + GS +DRH SL EG I Sbjct: 200 LRSLENIHSVIPPSHIM-FHLNDAATECGSGIDRHASLFEGMI 241 >UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepID=A5I5J9_CLOBH Length = 272 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H SY INL E EKS + I + +Q+ L FHPG +L S+E+ I E Sbjct: 69 HGSYFINLNADEIEKQEKSMERIIKGAEGLKQVQGRSLIFHPGFYLKD-SKEETFKTILE 127 Query: 129 SINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AG 187 ++ D GV +E T G+G+ G E++A ++ +CID H A + Sbjct: 128 NLKKLPD--LGVDYRLE-TTGKGTQFGSLEENVAL----CKEVDTCKLCIDFSHIHARSN 180 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 L++ + + + +G L MH++ + + + +R+H Sbjct: 181 GGLKSYKDFYNILSYVEKNLGRSALDDMHIHLSGIHYSEKGERNH 225 >UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoformans RepID=Q5K9B1_CRYNE Length = 492 Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 34/200 (17%) Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH-------------PGSHLM 115 H Y +NL S D ++EM++ + LG+S L P L Sbjct: 288 HGVYTVNL---------LSEDHVMEEMRQVKALGMSTLVIQYVRLFYRISSLLFPPFSLG 338 Query: 116 QISEEDC------LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 ++D L R+ + QG+T +ENT + L I+ Sbjct: 339 SAGKDDPSYKHVQLTRLVSDLREITRAVQGITLALENTVHPSPHSLTTLSSLCTILTHFP 398 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD 229 S++ +C+D H + +DL + K + T G + G+H++D G + D Sbjct: 399 -PSQLKLCLDLSHLHVSEFDLNS-ESGRKEMWELLETAGKARVVGVHVSDNYVAHGGKGD 456 Query: 230 RH-HSLGEGNIGHDAFRWIM 248 RH +SL I HD + ++ Sbjct: 457 RHANSLI---IPHDPIQSLL 473 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 436 e-121 UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organis... 409 e-113 UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4... 389 e-107 UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans... 386 e-106 UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax... 380 e-104 UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID... 379 e-104 UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible... 375 e-103 UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=... 375 e-102 UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2V... 372 e-102 UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepI... 372 e-102 UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Ta... 368 e-101 UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5... 368 e-100 UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20... 364 2e-99 UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=... 362 6e-99 UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-rep... 362 7e-99 UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putat... 359 9e-98 UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatron... 356 7e-97 UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organism... 355 1e-96 UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospi... 354 3e-96 UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold... 353 4e-96 UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofu... 353 5e-96 UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon... 352 9e-96 UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon... 351 2e-95 UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=... 350 4e-95 UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Plancto... 349 7e-95 UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (... 346 6e-94 UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix ... 346 8e-94 UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str.... 343 4e-93 UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblasti... 342 1e-92 UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacteri... 342 1e-92 UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula sta... 341 2e-92 UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus... 341 2e-92 UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=EN... 340 4e-92 UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 ... 339 9e-92 UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 338 1e-91 UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=E... 338 2e-91 UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental... 337 2e-91 UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae R... 336 4e-91 UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=... 336 5e-91 UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organi... 336 8e-91 UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae R... 335 9e-91 UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota R... 335 1e-90 UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 335 1e-90 UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples Re... 333 5e-90 UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellula... 329 9e-89 UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterin... 328 1e-88 UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales Re... 327 3e-88 UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio... 325 1e-87 UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae Rep... 322 7e-87 UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Ku... 319 5e-86 UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacil... 319 1e-85 UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infern... 317 3e-85 UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermac... 312 8e-84 UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovi... 311 1e-83 UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=... 311 2e-83 UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma galli... 311 2e-83 UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=S... 310 3e-83 UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vu... 310 3e-83 UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogeni... 310 3e-83 UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio de... 309 7e-83 UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosp... 307 4e-82 UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 R... 305 1e-81 UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum... 305 1e-81 UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 304 3e-81 UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus... 302 9e-81 UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS... 302 9e-81 UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium ... 301 1e-80 UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae... 300 4e-80 UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiropl... 299 7e-80 UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca ... 298 2e-79 UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 297 3e-79 UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium ... 297 4e-79 UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH 297 4e-79 UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX Re... 297 4e-79 UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penet... 296 5e-79 UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID... 296 5e-79 UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID... 296 6e-79 UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma Rep... 295 1e-78 UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncult... 295 2e-78 UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 294 3e-78 UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID... 293 6e-78 UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce ... 293 6e-78 UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID... 292 7e-78 UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepI... 292 8e-78 UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acida... 292 9e-78 UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales... 291 2e-77 UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solib... 290 5e-77 UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ell... 289 5e-77 UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae Re... 289 6e-77 UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholera... 289 9e-77 UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriac... 288 1e-76 UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexi... 288 2e-76 UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna... 288 2e-76 UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Euroti... 287 3e-76 UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermoph... 287 3e-76 UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phyto... 287 4e-76 UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius t... 287 4e-76 UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio... 286 6e-76 UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces ... 284 3e-75 UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_... 278 1e-73 UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID... 277 5e-73 UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM... 275 2e-72 UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03S... 273 4e-72 UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophi... 270 3e-71 UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus b... 261 2e-68 UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas au... 261 2e-68 UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus Rep... 253 4e-66 UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus... 244 3e-63 UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba pol... 243 6e-63 UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 242 8e-63 UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus... 242 1e-62 UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 239 8e-62 UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobiu... 237 4e-61 UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobac... 234 3e-60 UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Toma... 229 9e-59 UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Ta... 210 4e-53 UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseil... 208 1e-52 UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=... 207 4e-52 UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus ... 205 2e-51 UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Copr... 204 3e-51 UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepI... 201 2e-50 UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 ... 197 3e-49 UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 T... 191 3e-47 UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putat... 185 2e-45 UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogen... 173 7e-42 UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacteri... 156 6e-37 UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Anto... 156 6e-37 UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus b... 155 1e-36 UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=... 140 5e-32 UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endon... 139 8e-32 UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 138 3e-31 UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_... 130 4e-29 UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Breviba... 108 2e-22 UniRef50_B8PE96 Predicted protein n=1 Tax=Postia placenta Mad-69... 91 4e-17 UniRef50_C4HXN1 Endonuclease IV n=2 Tax=cellular organisms RepID... 79 1e-13 UniRef50_UPI000190C7DE endonuclease IV n=1 Tax=Salmonella enteri... 68 3e-10 Sequences not found previously or not previously below threshold: UniRef50_B0K0T0 Xylose isomerase domain protein TIM barrel n=13 ... 126 1e-27 UniRef50_A3DNS0 Endonuclease IV n=2 Tax=Desulfurococcaceae RepID... 117 4e-25 UniRef50_O27091 Endonuclease IV n=2 Tax=Methanobacteriales RepID... 116 1e-24 UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine f... 114 4e-24 UniRef50_B8D5D1 Endonuclease IV n=1 Tax=Desulfurococcus kamchatk... 114 4e-24 UniRef50_B0MRK4 Putative uncharacterized protein n=1 Tax=Eubacte... 110 5e-23 UniRef50_A6P1L7 Putative uncharacterized protein n=1 Tax=Bactero... 108 2e-22 UniRef50_A8ABG7 Endonuclease IV n=2 Tax=Archaea RepID=A8ABG7_IGNH4 104 3e-21 UniRef50_D1PP50 Deoxyribonuclease IV n=6 Tax=Clostridiales RepID... 104 4e-21 UniRef50_D2RI59 Xylose isomerase domain protein TIM barrel n=1 T... 102 1e-20 UniRef50_D1J987 Putative uncharacterized protein n=2 Tax=environ... 102 2e-20 UniRef50_A1RYK4 Endonuclease IV n=10 Tax=Archaea RepID=A1RYK4_THEPD 101 2e-20 UniRef50_A5ULU0 Endonuclease IV, xylose isomerase-like TIM barre... 100 1e-19 UniRef50_A4J1S8 Endonuclease IV n=1 Tax=Desulfotomaculum reducen... 99 1e-19 UniRef50_B1L7K8 Endonuclease IV n=1 Tax=Candidatus Korarchaeum c... 99 2e-19 UniRef50_B1I648 Xylose isomerase domain protein TIM barrel n=3 T... 98 4e-19 UniRef50_A8MDH2 Xylose isomerase domain protein TIM barrel n=1 T... 96 1e-18 UniRef50_B8DYJ2 Xylose isomerase domain protein TIM barrel n=2 T... 95 2e-18 UniRef50_Q12UI4 TIM alpha/beta barrel protein n=7 Tax=cellular o... 94 3e-18 UniRef50_A1RRV6 Endonuclease IV n=17 Tax=Thermoprotei RepID=A1RR... 92 3e-17 UniRef50_Q58707 Uncharacterized protein MJ1311 n=11 Tax=Methanoc... 88 3e-16 UniRef50_D1Z1Z5 Putative uncharacterized protein n=1 Tax=Methano... 88 4e-16 UniRef50_D1YXJ1 Putative endonuclease IV n=1 Tax=Methanocella pa... 87 6e-16 UniRef50_C6A0Y0 Xylose isomerase domain-containing protein n=1 T... 86 1e-15 UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepI... 86 2e-15 UniRef50_C5A4T0 Deoxyribonuclease IV (BER) (Nfo) n=2 Tax=Thermoc... 84 4e-15 UniRef50_A5UMM8 Predicted sugar phosphate isomerase/epimerase, A... 84 6e-15 UniRef50_Q59009 Uncharacterized protein MJ1614 n=6 Tax=Methanoco... 83 1e-14 UniRef50_Q57597 Uncharacterized protein MJ0133 n=12 Tax=Methanoc... 81 3e-14 UniRef50_Q214G7 Endonuclease IV n=1 Tax=Rhodopseudomonas palustr... 81 4e-14 UniRef50_B6YWM5 Putative uncharacterized protein n=1 Tax=Thermoc... 81 5e-14 UniRef50_Q3Z9G2 AP endonuclease, family 2 protein n=5 Tax=Dehalo... 81 6e-14 UniRef50_Q0W7H9 Putative uncharacterized protein n=1 Tax=uncultu... 80 1e-13 UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoform... 78 5e-13 UniRef50_Q0W054 Putative uncharacterized protein n=1 Tax=uncultu... 78 5e-13 UniRef50_B8FPG2 Xylose isomerase domain protein TIM barrel n=9 T... 78 5e-13 UniRef50_A3CT33 Xylose isomerase domain protein TIM barrel n=1 T... 77 6e-13 UniRef50_C4G2Z7 Putative uncharacterized protein n=1 Tax=Abiotro... 77 7e-13 UniRef50_A5UMG1 Sugar phosphate isomerase/epimerase, AP endonucl... 77 8e-13 UniRef50_Q2NGK4 Predicted sugar phosphate isomerase/epimerase or... 76 2e-12 UniRef50_D1YXC1 Putative uncharacterized protein n=1 Tax=Methano... 76 2e-12 UniRef50_A2ST75 Xylose isomerase domain protein TIM barrel n=1 T... 75 3e-12 UniRef50_Q5NVW6 Predicted sugar phosphate isomerase / epimerase ... 74 6e-12 UniRef50_A3CX04 Xylose isomerase domain protein TIM barrel n=2 T... 73 9e-12 UniRef50_A8TE27 Xylose isomerase domain protein TIM barrel n=1 T... 73 1e-11 UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 T... 73 1e-11 UniRef50_Q58587 Uncharacterized protein MJ1188 n=5 Tax=Methanoca... 73 1e-11 UniRef50_Q39ZU4 Putative uncharacterized protein n=1 Tax=Pelobac... 73 1e-11 UniRef50_A3CVT4 Xylose isomerase domain protein TIM barrel n=4 T... 73 2e-11 UniRef50_A8TFI1 Xylose isomerase domain protein TIM barrel n=1 T... 73 2e-11 UniRef50_A5UTA1 Xylose isomerase domain protein TIM barrel n=1 T... 72 2e-11 UniRef50_C1F9P4 AP endonuclease, family 2 n=1 Tax=Acidobacterium... 72 2e-11 UniRef50_A0RR50 AP endonuclease, family 2 n=3 Tax=Campylobacter ... 71 3e-11 UniRef50_A5G934 Xylose isomerase domain protein TIM barrel n=9 T... 71 4e-11 UniRef50_B5WBQ3 Xylose isomerase domain protein TIM barrel n=1 T... 71 4e-11 UniRef50_A7I9J6 Xylose isomerase domain protein TIM barrel n=1 T... 69 1e-10 UniRef50_B8H746 Xylose isomerase domain protein TIM barrel n=1 T... 69 2e-10 UniRef50_Q89P16 Blr3667 protein n=1 Tax=Bradyrhizobium japonicum... 69 2e-10 UniRef50_B8IW61 Xylose isomerase domain protein TIM barrel n=1 T... 68 3e-10 UniRef50_A7IGY1 Xylose isomerase domain protein TIM barrel n=2 T... 68 4e-10 UniRef50_A5IJZ8 Xylose isomerase domain protein TIM barrel n=4 T... 68 4e-10 UniRef50_Q0W8Q0 Predicted endonuclease/nucleotidyltransferase n=... 68 5e-10 UniRef50_D1Z0C2 Putative uncharacterized protein n=1 Tax=Methano... 67 6e-10 UniRef50_Q315E0 AP endonuclease, family 2 n=1 Tax=Desulfovibrio ... 67 6e-10 UniRef50_A3CSY1 Xylose isomerase domain protein TIM barrel n=1 T... 67 6e-10 UniRef50_B0MII0 Putative uncharacterized protein n=2 Tax=Clostri... 67 7e-10 UniRef50_A1ZRD9 AP endonuclease, family 2, putative n=1 Tax=Micr... 67 7e-10 UniRef50_UPI0001C41B6B xylose isomerase-like TIM barrel domain-c... 67 8e-10 UniRef50_UPI0001C36838 binding-protein-dependent transport syste... 67 9e-10 UniRef50_Q49058 Similar to AP-endonucleases (Fragment) n=1 Tax=M... 66 2e-09 UniRef50_UPI0001C41E27 xylose isomerase-like TIM barrel domain-c... 65 2e-09 UniRef50_A7I6Z5 Xylose isomerase domain protein TIM barrel n=1 T... 65 2e-09 UniRef50_Q12VU1 Xylose isomerase-like TIM barrel-domain protein ... 65 3e-09 UniRef50_A6UKP5 Xylose isomerase domain protein TIM barrel n=1 T... 65 3e-09 UniRef50_Q2FTK0 Xylose isomerase-like TIM barrel n=1 Tax=Methano... 64 4e-09 UniRef50_O26349 Conserved protein n=1 Tax=Methanothermobacter th... 64 6e-09 UniRef50_A2BJW8 AP endonuclease family 2 n=1 Tax=Hyperthermus bu... 63 8e-09 UniRef50_B5YFP0 AP endonuclease, family 2 n=1 Tax=Thermodesulfov... 63 8e-09 UniRef50_A3CUM4 Xylose isomerase domain protein TIM barrel n=5 T... 63 1e-08 UniRef50_C5ZZU7 Predicted AP endonuclease n=1 Tax=Thermococcus s... 63 1e-08 UniRef50_B8GFX2 Xylose isomerase domain protein TIM barrel n=1 T... 63 1e-08 UniRef50_B3DUJ2 Sugar phosphate isomerase/epimerase n=1 Tax=Meth... 63 2e-08 UniRef50_D1YUX5 Putative uncharacterized protein n=1 Tax=Methano... 62 2e-08 UniRef50_C5U5E3 Xylose isomerase domain protein TIM barrel n=1 T... 62 2e-08 UniRef50_C1XY70 Sugar phosphate isomerase/epimerase n=5 Tax=Ther... 61 3e-08 UniRef50_C0D4C4 Putative uncharacterized protein n=1 Tax=Clostri... 61 4e-08 UniRef50_Q12U55 Protein with xylose isomerase-type TIM barrel do... 61 4e-08 UniRef50_UPI0001973D8B hypothetical protein ClM62_09651 n=1 Tax=... 61 4e-08 UniRef50_Q0W4S5 Putative uncharacterized protein n=1 Tax=uncultu... 61 5e-08 UniRef50_C0CGT0 Putative uncharacterized protein n=1 Tax=Blautia... 61 6e-08 UniRef50_Q2RIM8 Xylose isomerase-like TIM barrel n=1 Tax=Moorell... 61 6e-08 UniRef50_Q897Z7 Conserved protein n=1 Tax=Clostridium tetani Rep... 61 6e-08 UniRef50_A2ST89 Xylose isomerase domain protein TIM barrel n=1 T... 60 7e-08 UniRef50_B9Y2T1 Putative uncharacterized protein n=1 Tax=Holdema... 60 7e-08 UniRef50_B7A713 Xylose isomerase domain protein TIM barrel n=3 T... 60 1e-07 UniRef50_B9CN09 Binding-protein-dependent transport systems inne... 60 1e-07 UniRef50_A8THY1 Xylose isomerase domain protein TIM barrel n=1 T... 59 1e-07 UniRef50_B9LR33 Xylose isomerase domain protein TIM barrel n=1 T... 59 1e-07 UniRef50_B0PBZ9 Putative uncharacterized protein n=2 Tax=Clostri... 59 1e-07 UniRef50_Q8TWL2 Sugar phosphate isomerase/epimerase n=1 Tax=Meth... 59 1e-07 UniRef50_O27533 Conserved protein n=1 Tax=Methanothermobacter th... 59 1e-07 UniRef50_C7IJG8 Xylose isomerase domain protein TIM barrel n=1 T... 59 2e-07 UniRef50_Q0W0Q9 Putative endonuclease IV n=1 Tax=uncultured meth... 59 2e-07 UniRef50_A9A740 Xylose isomerase domain protein TIM barrel n=1 T... 59 2e-07 UniRef50_Q8ABB7 Sugar phosphate isomerase / epimerase-like prote... 59 2e-07 UniRef50_D1CE39 Xylose isomerase domain protein TIM barrel n=1 T... 59 2e-07 UniRef50_C5A395 Predicted AP endonuclease n=3 Tax=Thermococcacea... 58 3e-07 UniRef50_A8A905 Xylose isomerase domain protein TIM barrel n=1 T... 58 3e-07 UniRef50_C6C274 Xylose isomerase domain protein TIM barrel n=1 T... 58 3e-07 UniRef50_A0P1Y9 Putative uncharacterized protein n=1 Tax=Labrenz... 58 3e-07 UniRef50_B9KZV5 Putative conserved protein n=1 Tax=Thermomicrobi... 58 3e-07 UniRef50_A4AP53 Putative uncharacterized protein n=1 Tax=Flavoba... 58 4e-07 UniRef50_B9KBM8 Xylose isomerase domain protein TIM barrel n=2 T... 58 5e-07 UniRef50_Q2LSS8 Endonuclease IV n=1 Tax=Syntrophus aciditrophicu... 58 5e-07 >UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 Length = 285 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH Sbjct: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE Sbjct: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA Sbjct: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 >UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organisms RepID=END4_KLEP7 Length = 284 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 246/282 (87%), Positives = 260/282 (92%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKY+GAHVSA+GGLANAAIRAAEI+ATAFALFTKNQRQWRAAPL+ +TI EFKAACEKYH Sbjct: 1 MKYVGAHVSASGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLSDETIAEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + QILPHDSYLINLGHPV EALEKSRDAFIDEM RC+QLGL+LLNFHPGSHL QI EE Sbjct: 61 FGPGQILPHDSYLINLGHPVEEALEKSRDAFIDEMTRCQQLGLTLLNFHPGSHLQQIPEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +CLARIAESINIAL KT+GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 ECLARIAESINIALAKTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLR+ CEKTFA F R VGF+YLRGMHLNDAKS FGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRSAEACEKTFAAFERIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 HD F WIMQD RFDGIPLILETINPDIWAEEIAWL+AQQ + Sbjct: 241 HDCFSWIMQDSRFDGIPLILETINPDIWAEEIAWLRAQQIAE 282 >UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4 Tax=cellular organisms RepID=Q4N5F6_THEPA Length = 422 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 128/281 (45%), Positives = 183/281 (65%), Gaps = 4/281 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIGAHVSA+GG N+ A I AFALF KNQR W L+ I++F+ ++Y Sbjct: 140 VYIGAHVSASGGPDNSVGNAYNILGQAFALFLKNQRTWNWTDLSKSAIEKFQINMLNHNY 199 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH SYLIN+ +P E +++ D F+D++QRCE LG++L NFHPGS + + Sbjct: 200 DPKFVLPHASYLINVANPDPEKRKRAFDNFLDDIQRCEVLGITLYNFHPGSTCGLCEKSE 259 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + I++ IN AL+ T+GVT V+EN AGQ + +G KFE L IID VEDKSRVG+C+DTC Sbjct: 260 GIQHISDCINKALEMTKGVTIVLENAAGQKNVIGSKFEDLRQIIDKVEDKSRVGICLDTC 319 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+RT + ++ +F + VG KYLR +HLND+KS GS +DRH ++G+G + Sbjct: 320 HLFAAGYDIRTTEQFDEVMKEFDKVVGLKYLRAVHLNDSKSDLGSGLDRHENIGKGKLSE 379 Query: 242 DAFRWIMQDDRFDGIPLILETINP----DIWAEEIAWLKAQ 278 FR+I+ F +P+ILET P +++ +E+ + + Sbjct: 380 QTFRFIVNSPYFKNMPIILETPVPEGNEEVYKQEVKLMYSL 420 >UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CSD8_SHEPW Length = 284 Score = 386 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 172/279 (61%), Positives = 207/279 (74%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHVSA+GG+ANA + AA I A AFALFTKNQR+W + PL I F+ C + + + Sbjct: 6 LIGAHVSASGGIANAPLNAASIGANAFALFTKNQRRWVSKPLDEAQIALFQQNCAEANIS 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPHDSYLINLGHP E L KSR+AF DE+ RCEQ+GL+LLNFHPGSHL QI + C Sbjct: 66 MDAILPHDSYLINLGHPDDELLTKSREAFYDEIARCEQIGLTLLNFHPGSHLRQIDTDKC 125 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L+RI+ESIN AL ++ VTAVIENTAGQGSNLG FE LA IIDGVEDKSRVG+CIDTCH Sbjct: 126 LSRISESINFALSQSTTVTAVIENTAGQGSNLGHSFEQLAQIIDGVEDKSRVGICIDTCH 185 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+R+ A C F F + VG +YL+ MHLND+K+ SRVDRH SLG+G IG + Sbjct: 186 MFAAGYDIRSQASCLSAFDLFDKVVGNRYLKAMHLNDSKTKLNSRVDRHESLGKGEIGAE 245 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 AF +M + GIPLILET + D+WA EI WL++ + Sbjct: 246 AFSTLMTLEAVKGIPLILETTDADLWAAEINWLRSLVPK 284 >UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax=cellular organisms RepID=Q8IE02_PLAF7 Length = 597 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 130/285 (45%), Positives = 185/285 (64%), Gaps = 4/285 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 Y+GAH+SA+GG+ NA I + I AFALF KNQR+W +A LT + I +F+ C+KY++ Sbjct: 313 VYLGAHISASGGVQNAPINSFNISGLAFALFLKNQRKWESAALTNENIKQFEENCKKYNF 372 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SYLINL +P E +KS +F+D+++RCEQL + L NFHPGS + Q + ++ Sbjct: 373 DKNFILPHGSYLINLANPDKEKRDKSYLSFLDDIKRCEQLNIKLYNFHPGSTVGQCTVDE 432 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + +A+ IN +T V V+EN+AGQ +++G KFEHL II+ V DK R+GVC+DTC Sbjct: 433 GIKNVADCINKVHKETNNVIIVLENSAGQKNSVGSKFEHLRDIINLVHDKDRIGVCLDTC 492 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY+++T + F V KYL+ +HLND+KS GS +DRH ++G+G + Sbjct: 493 HTFAAGYNIKTFENFDNVMKQFDDIVNVKYLKAVHLNDSKSDIGSGLDRHENIGKGKLTM 552 Query: 242 DAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEK 282 D F++IM+ F IP+ILET + I+ EI L EK Sbjct: 553 DTFKYIMKSKYFKNIPIILETPDITNDESIYKYEIQNLYKLYFEK 597 >UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID=B6KKD5_TOXGO Length = 667 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 177/287 (61%), Gaps = 7/287 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAH+SAAGG+ NA + I AFA F KNQR+W + P++ ++ D FKA K Sbjct: 381 KFLGAHISAAGGVQNAPVNCLAIGGQAFAFFLKNQRRWDSPPISDESADGFKAEVAKLKL 440 Query: 62 T-SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ILPH SYLINL +P + S +AF+D++QRCEQ+G+ FHPGS + Q ++E Sbjct: 441 DGPEHILPHGSYLINLANPDAAKRKVSYNAFLDDLQRCEQIGVHRYVFHPGSTVGQCTKE 500 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + IAE +N A+ T+ VT ++EN AGQ + L +FE L II V+ K R+GVC+DT Sbjct: 501 ESIRHIAECLNKAIAATKSVTILLENMAGQKNVLCSEFEDLRDIIALVDRKDRIGVCLDT 560 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH ++AG+D++T + E F VG KYL+ MH+ND+K+ GS +DRH LG+G +G Sbjct: 561 CHLYSAGHDIKTEEKFEAVMKKFDSIVGMKYLKAMHINDSKAPLGSGLDRHEHLGKGTLG 620 Query: 241 HDAFRWIMQDDR-FDGIPLILETI-----NPDIWAEEIAWLKAQQTE 281 F++IMQ F +PL+LET P +W +E + E Sbjct: 621 MAPFKFIMQHPTWFKDMPLVLETPDVDNSGPAMWRKETEMMYKFIEE 667 >UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible bacterial horizontal transfer (Fragment) n=4 Tax=cellular organisms RepID=Q5CT26_CRYPV Length = 364 Score = 375 bits (964), Expect = e-103, Method: Composition-based stats. Identities = 134/285 (47%), Positives = 185/285 (64%), Gaps = 6/285 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVSA+GG+ + + I AF++F K R W A PL QTID FK CE Sbjct: 79 KFVGAHVSASGGVDKSVNNSMNIAGMAFSMFLKPSRGWNAPPLKQQTIDLFKKNCETNKI 138 Query: 62 T-SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +PH SYLINLG+P E K AF DE++RC+ LG+ L NFHPGS + Q S+E Sbjct: 139 EYCKFCIPHGSYLINLGNPDEEKRSKMYGAFEDELKRCDALGIKLYNFHPGSTVGQCSKE 198 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + I++ IN A ++T+ V V+EN A + +G++F+ L+ II+ V+DKSR+GVC+DT Sbjct: 199 ESIQFISDCINKAHEQTKSVITVLENCA-ESKCVGYRFKELSEIIERVKDKSRIGVCLDT 257 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+RT K +F +G KYL+ MHLND+K F S +DRH +LG+GNIG Sbjct: 258 CHLFAAGYDVRTAESFNKVMVEFEAVIGLKYLKAMHLNDSKGQFNSGLDRHENLGKGNIG 317 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD----IWAEEIAWLKAQQTE 281 + F++IM D RF+ IPLILET +P+ ++ +EIA L E Sbjct: 318 MECFKFIMNDSRFNDIPLILETPDPNNDDKVYKKEIAILYDMLVE 362 >UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=A8KBF9_XENTR Length = 363 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 124/278 (44%), Positives = 181/278 (65%), Gaps = 1/278 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA + A +I A+A +F +QR W++ L + + F+ C++ + Sbjct: 72 KFVGAHVSIQGGIWNAVLVARQIGASAIGMFLGSQRTWKSKALDDKAAERFQRTCKELGF 131 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S ILPH YL+NLG P + L+KS+ +DE+ +C QLGL++ N HPGS + +S Sbjct: 132 KSRYILPHSPYLMNLGSPKPDVLQKSQAMLVDELHKCHQLGLTMYNIHPGSCVGAMSVSK 191 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 CL IA+ IN+A + GV V+EN + QGS +G +FE L IID V DKSR+GVC+DTC Sbjct: 192 CLELIADGINLAHAQVPGVIVVLENMSCQGSTVGGRFEELRGIIDLVVDKSRIGVCLDTC 251 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAG+DL A E +F + VG +L+ +HLND++ G ++DRH ++G G+IG Sbjct: 252 HAFAAGHDLSKKAGLEHMLDEFNKVVGLSFLKAIHLNDSQGELGCKLDRHENIGHGHIGL 311 Query: 242 DAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQ 278 + FR +M + RF+GIP+ILET + D A+EI L + Sbjct: 312 EGFRHVMNEPRFNGIPMILETPLSSDDHAKEIELLYSL 349 >UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2VNP8_NAEGR Length = 462 Score = 372 bits (955), Expect = e-102, Method: Composition-based stats. Identities = 136/285 (47%), Positives = 183/285 (64%), Gaps = 3/285 (1%) Query: 2 KYIGAHVS-AAGGLANAAIRAAEIDA-TAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 +IG HVS + G+ A I A E FA F NQ+ + T + + F C+KY Sbjct: 171 LFIGCHVSYGSKGVETAPIAAYETGCYGGFAFFLGNQKTYSQKEYTDKMVSTFIENCKKY 230 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 +Y +LPH SYLINL +P LEKS+ F+ E Q+CE+LG NFHPGS + + Sbjct: 231 NYDPKNLLPHASYLINLANPDQTKLEKSKTLFLSEYQKCERLGAVRYNFHPGSTVGATTL 290 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E +IAE IN A ++T GV +V+E TAG G ++G KFEHL IID VEDK+RVGVC+D Sbjct: 291 EAGCKQIAECINWANEQTVGVCSVLECTAGGGHSIGHKFEHLKMIIDHVEDKNRVGVCLD 350 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYDLRT CEK F +F VGFKYL+GMHLND+K G++ DRH +LG+G++ Sbjct: 351 TCHMFAAGYDLRTQEGCEKVFNEFDEIVGFKYLKGMHLNDSKVKLGTKKDRHENLGKGHL 410 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 G + F++I+ ++ F IP++LET ++A+EI L + EK V Sbjct: 411 GIEVFKYIVNNENFRNIPMVLETP-EGLYADEIQELYSYYNEKEV 454 >UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepID=D1C4C4_SPHTD Length = 288 Score = 372 bits (955), Expect = e-102, Method: Composition-based stats. Identities = 125/283 (44%), Positives = 168/283 (59%), Gaps = 8/283 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S AGG+ A RA ++D A +FTKN QW A P+ + ++ F+ E+ Sbjct: 1 MLLFGAHMSIAGGVDKAIDRAEKVDCDAVQIFTKNNNQWNAKPIPPEQVERFQQRQEEAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ HDSYLINL P EKS DAF E++RCE LG+ L HPGSH E+ Sbjct: 61 IRA--VVAHDSYLINLASPDDALWEKSIDAFRVELERCELLGVPYLVTHPGSHTG-AGED 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + R+A+++N G V ++E TAGQGS LG++FE L AI+D V + RVG C Sbjct: 118 FGIQRVADALNRIHIDLPGYRVMTLLEITAGQGSALGYRFEQLRAIVDRVAEPERVGYCF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGY+LRTP +T F R +G LR +HLND+K GSRVDRH +G G Sbjct: 178 DTCHAFAAGYELRTPEGYAETMDAFDRILGLANLRALHLNDSKRELGSRVDRHDHIGAGM 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWLKAQ 278 IG F ++ D R +G+P +LET D AE +A L++ Sbjct: 238 IGLAGFHNVVNDPRLEGLPGLLETPKSDDLHEDAENLARLRSL 280 >UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Eumetazoa RepID=APN1_CAEEL Length = 396 Score = 368 bits (946), Expect = e-101, Method: Composition-based stats. Identities = 126/271 (46%), Positives = 179/271 (66%), Gaps = 1/271 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVSAAGGL A A +FA+F +NQR W P++ + ++ + A + ++ Sbjct: 118 KMLGFHVSAAGGLEQAIYNARAEGCRSFAMFVRNQRTWNHKPMSEEVVENWWKAVRETNF 177 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 QI+PH SYL+N G P E LEKSR A +DE QR E+LG+++ NFHPGS + + +E+ Sbjct: 178 PLDQIVPHGSYLMNAGSPEAEKLEKSRLAMLDECQRAEKLGITMYNFHPGSTVGKCEKEE 237 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 C+ IAE+I+ ++KT+ + V+E AGQG+++G FE L IID V+ KSRVGVCIDTC Sbjct: 238 CMTTIAETIDFVVEKTENIILVLETMAGQGNSIGGTFEELKFIIDKVKVKSRVGVCIDTC 297 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA GYD+RT E+ +F VG+ YL+ +H+ND+K GS++DRH +G+G IG Sbjct: 298 HIFAGGYDIRTQKAYEEVMKNFGEVVGWNYLKAIHINDSKGDVGSKLDRHEHIGQGKIGK 357 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEI 272 AF +M D+R DGIP+ILET + EE+ Sbjct: 358 AAFELLMNDNRLDGIPMILETP-EGKYPEEM 387 >UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5DGG3_LACTC Length = 405 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 120/277 (43%), Positives = 171/277 (61%), Gaps = 4/277 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S AGG++N+ A I AFA+F K+ R+W + T + ID+FK C++ Y Sbjct: 60 KFGAHISTAGGISNSVTNAYNIGCNAFAMFLKSPRKWVSPDYTQEEIDKFKQKCKELGYN 119 Query: 63 S-AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH Y INL +P E EKS +FID+++RCEQLG+ L NFHPGS L + + Sbjct: 120 PLTDVLPHGQYFINLANPEPEKAEKSYASFIDDLKRCEQLGVGLYNFHPGSSL-KGNHAK 178 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L ++A IN A+ +T+ V V+EN AG GS +G + L +ID VE+K RVGVC+DTC Sbjct: 179 QLRQLASYINKAIAETKFVKIVLENMAGTGSLVGSDLQDLKDVIDMVENKDRVGVCVDTC 238 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+ + +K + F +TVGFKYL +HLND+K+ + D H LG+G +G Sbjct: 239 HTFAAGYDISSKDSYDKFWQTFDKTVGFKYLSAIHLNDSKAPLAANRDLHEKLGQGFLGL 298 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLK 276 + F+ + + GIP+ILET + + EI L+ Sbjct: 299 EVFKLVANSEFLRGIPVILETPHTKDEGYGHEIKLLE 335 >UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20 Tax=Saccharomycetales RepID=APN1_YEAST Length = 367 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 118/286 (41%), Positives = 171/286 (59%), Gaps = 7/286 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S AGG++N+ A +FA+F K+ R+W + T + ID+FK C Y+Y Sbjct: 16 KFGAHMSGAGGISNSVTNAFNTGCNSFAMFLKSPRKWVSPQYTQEEIDKFKKNCATYNYN 75 Query: 63 S-AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH Y INL +P E EKS ++F+D++ RCEQLG+ L N HPGS L + + Sbjct: 76 PLTDVLPHGQYFINLANPDREKAEKSYESFMDDLNRCEQLGIGLYNLHPGSTL-KGDHQL 134 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L ++A +N A+ +T+ V V+EN AG G+ +G L +I +EDKSR+GVCIDTC Sbjct: 135 QLKQLASYLNKAIKETKFVKIVLENMAGTGNLVGSSLVDLKEVIGMIEDKSRIGVCIDTC 194 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+ T + +F +GFKYL +HLND+K+ G+ D H LG+G +G Sbjct: 195 HTFAAGYDISTTETFNNFWKEFNDVIGFKYLSAVHLNDSKAPLGANRDLHERLGQGYLGI 254 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEI---AWLKAQQTEK 282 D FR I + GIP++LET N + + EI WL+++ + Sbjct: 255 DVFRMIAHSEYLQGIPIVLETPYENDEGYGNEIKLMEWLESKSESE 300 >UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=END4_CHLAD Length = 286 Score = 362 bits (931), Expect = 6e-99, Method: Composition-based stats. Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 8/283 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S +GG++ + R + A +F KN+RQW A P++ + + F+A ++ Sbjct: 1 MPRFGAHMSISGGVSKSFARGESVGLDAMQIFAKNERQWTAKPISAEEMAAFQAEQQRTG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINL P + EKS AF DE++RC QL + L HPG+H I EE Sbjct: 61 I--HPVIVHDSYLINLAAPADDLREKSIVAFADELERCAQLKIPYLVTHPGAHTG-IGEE 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+A++I+ L + G ++E TAGQG+ LG++FEHLA + + + R+GVC+ Sbjct: 118 AGLVRVADAISRLLAEGVGGTTMILLETTAGQGTALGYRFEHLARLFELIPYHDRLGVCV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+R P + TFA+ R VG + ++ HLND++ GSRVDRH +G+G Sbjct: 178 DTCHIFAAGYDIRDPDTYDATFAELDRLVGLERVKCFHLNDSQKDLGSRVDRHAHIGQGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEE---IAWLKAQ 278 IG +AFR ++ D RF +P+I+ET + AE+ +A L++ Sbjct: 238 IGTEAFRLLVNDPRFAHLPMIIETPKGEDMAEDRMNLALLRSL 280 >UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage n=3 Tax=Saccharomycetales RepID=C4R5M7_PICPG Length = 347 Score = 362 bits (930), Expect = 7e-99, Method: Composition-based stats. Identities = 125/278 (44%), Positives = 180/278 (64%), Gaps = 5/278 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S +GG++NA + I A +FALF K+ R+W + T +++FKA C++++Y Sbjct: 5 KFGAHISTSGGVSNAVTNSTNISAKSFALFLKSPRRWVSPMFTDDEVNKFKALCKEHNYN 64 Query: 63 S-AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S +ILPH SY INL +P E EK+ AF+D+++RCE L + L NFHPGS L ++ Sbjct: 65 SRTEILPHGSYFINLANPDLEKEEKAYGAFLDDLKRCELLDIGLYNFHPGSDLG-SDHQE 123 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L R+A++IN A+++T+ V VIEN AG G+ +G E + +ID V+DKSRVGVCIDTC Sbjct: 124 ALKRLAKNINTAINETKFVKIVIENMAGHGNLIGSDLEDIKTVIDMVDDKSRVGVCIDTC 183 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+R + + +T+GF+YL +HLND+K+ G+ D H +G G +G Sbjct: 184 HTFAAGYDIRDEESYNAFWELYDKTIGFEYLSAIHLNDSKAPLGANKDLHQKIGWGFLGL 243 Query: 242 DAFRWIMQDDRFDGIPLILETIN---PDIWAEEIAWLK 276 + FR I + GIPL+LET N P +W EEI L+ Sbjct: 244 EPFRLIANSEFLQGIPLVLETPNDNTPQLWEEEIKLLE 281 >UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putative n=4 Tax=cellular organisms RepID=Q5KCJ9_CRYNE Length = 463 Score = 359 bits (921), Expect = 9e-98, Method: Composition-based stats. Identities = 136/293 (46%), Positives = 172/293 (58%), Gaps = 15/293 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY--- 59 +GAHVSAAGG A A +RA A ALF K+QRQW++ P +T+ FK + Sbjct: 116 LLGAHVSAAGGPATALLRAGLAGANGLALFVKSQRQWKSKPYEDETVQRFKELMKSKEEG 175 Query: 60 --HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 Y IL H SYLINLG+P + S + F D++ RC QLG+ L N+HPGS + Sbjct: 176 GMGYGPESILVHGSYLINLGNPDPAKWKVSYECFKDDIARCHQLGIKLYNWHPGSTVGAC 235 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNL-GFKFEHLAAIIDGVEDKSRVGV 176 ++E+ A IA++IN V VIEN A GSN+ G + L++II VEDKSRV V Sbjct: 236 TKEESFALIAKAINQVHKDVPEVITVIENMANAGSNIVGTAWSDLSSIIKLVEDKSRVRV 295 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 CIDTCH FAAGYD+RTP +T F VG KYL G+HLND+K+ G+ D H ++G Sbjct: 296 CIDTCHTFAAGYDIRTPETYAETMKRFDEVVGNKYLAGVHLNDSKANLGANKDLHENIGL 355 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPD---------IWAEEIAWLKAQQT 280 G IG AFR IM+D GIPL+LET PD IW +EIA L Q Sbjct: 356 GEIGLTAFRCIMRDPLMTGIPLVLETPAPDAPTPAEHLSIWTKEIALLYEIQA 408 >UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRW0_9DELT Length = 290 Score = 356 bits (913), Expect = 7e-97, Method: Composition-based stats. Identities = 108/282 (38%), Positives = 161/282 (57%), Gaps = 10/282 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +Y+GAH S +GGL A R + TA +FT+NQRQW+ +P+ Q ++F+ A +++ Sbjct: 5 RYLGAHCSVSGGLYRAVERIEGLSGTALQIFTRNQRQWKTSPVKEQEAEQFRQALQQWG- 63 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + HDSYLINL P E L+KS AF E++RC LG+ L HPG+H Q + Sbjct: 64 -DYPVFSHDSYLINLASPDREILKKSVQAFAGELKRCALLGIPGLVTHPGAHKGQ-GLDK 121 Query: 122 CLARIAESINIALD-------KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRV 174 L +++ ALD ++ V ++E T+GQG+ LG F+ L II ++ R+ Sbjct: 122 GLQAYVRALDEALDLALQQCPESADVEVLLETTSGQGTVLGSTFQELDFIISTSKNSDRL 181 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 GVC DTCH FAAGYD+RT T TVG + ++ +HLND+ GSR DRH + Sbjct: 182 GVCFDTCHVFAAGYDMRTRESYNATMQTLDSTVGLQRVQAVHLNDSSYGLGSRGDRHEHI 241 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 G+G +G + FR ++ D RF +P+++ET ++A L Sbjct: 242 GKGEMGLEPFRLVLNDPRFYDVPMVIETPKDKAGKWDLANLN 283 >UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organisms RepID=END4_DICDI Length = 542 Score = 355 bits (911), Expect = 1e-96, Method: Composition-based stats. Identities = 129/280 (46%), Positives = 181/280 (64%), Gaps = 2/280 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG HVS G A A FT R W+ + +FK +C+ ++ Sbjct: 261 VKIGGHVSIKNGYPTLIQSVVAQGFKAVAFFTNPPRTWKHHTVKLDDSIKFKQSCKSLNF 320 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SY +NLG P E L+KSRD I EM+ CE LG+ NFHPGSHL +ISE + Sbjct: 321 DVNCILPHGSYFLNLGSPNKENLQKSRDLMIHEMKNCEILGVKHFNFHPGSHLNEISESE 380 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + +AES++ L++T+ V AVIE TAGQG+NLG+ FEHL +I V+DK+RVGVC+DTC Sbjct: 381 SIKIVAESLDYILERTKDVVAVIECTAGQGTNLGYTFEHLRDMIALVKDKTRVGVCLDTC 440 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY++ T + C+ F +F + VGFKYL+G+HLND+KST GS++DRH ++G+G+IG Sbjct: 441 HMFAAGYNISTKSNCDVIFQEFDKVVGFKYLKGVHLNDSKSTCGSKLDRHENIGKGHIGT 500 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 F++++ D RF IP+ILET+ P + +E+ L + + Sbjct: 501 PCFKYLVNDKRFQNIPMILETVGP--YDQEVKLLYSFIED 538 >UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospiraceae RepID=END4_HALHL Length = 297 Score = 354 bits (908), Expect = 3e-96, Method: Composition-based stats. Identities = 122/281 (43%), Positives = 161/281 (57%), Gaps = 7/281 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVSAAGG A R EI LFT+NQR W+ P+ D F+ A ++ Sbjct: 1 MPEIGAHVSAAGGPQRAPERGGEIGCDCMQLFTRNQRSWKVKPIAPGEADAFRRARAEHG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ H SYLINL E KS+ A E++RC QLG+ LLNFHPG+HL + E Sbjct: 61 IGA--VMSHASYLINLAATDPEKHAKSQTALEAELERCHQLGIELLNFHPGAHL-EAGIE 117 Query: 121 DCLARIAESINIA---LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + IA ++N V V+EN AGQGS +G F LAAI++ +E R GVC Sbjct: 118 AGIETIAATLNAICRNHPDKTDVCLVLENVAGQGSTVGADFAELAAILERLETPERFGVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DT HAFAAGY+L T A + +A F +G L +HLND++ GSR DRH +G G Sbjct: 178 VDTAHAFAAGYELHTAAGWDAMWAAFDDHIGLNRLVALHLNDSRPPCGSRKDRHALIGRG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKA 277 IG +AFR + D R +P +LET P+ WA+EI WL+ Sbjct: 238 EIGPEAFRRAVTDPRTASLPQMLETPAGPEGWAQEIDWLRG 278 >UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold_7 n=10 Tax=Sordariomyceta RepID=D1Z7I7_SORMA Length = 500 Score = 353 bits (906), Expect = 4e-96, Method: Composition-based stats. Identities = 127/292 (43%), Positives = 173/292 (59%), Gaps = 16/292 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIGAHVS+AGG+ N+ A I A AFA+F K+QR+W + PL F+ + Y Sbjct: 124 LYIGAHVSSAGGVQNSITNALHIGANAFAVFLKSQRKWVSPPLEPSAASSFRDLASLHSY 183 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + +LPH SYL+NL +++ F+D++QRC LG+ L NFHPGS + EE Sbjct: 184 SVGEHVLPHGSYLVNLAQIDKTKADQAYANFVDDLQRCATLGIKLYNFHPGSTGGEPIEE 243 Query: 121 DCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 C ARIA +N A + T VIEN G G+ +G +FE L I+DGVEDKSRVGVCI Sbjct: 244 AC-ARIASQLNRAHKEKGTGETVTVIENMCGSGNVIGSRFEELKMIVDGVEDKSRVGVCI 302 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAG+DLRTP +T F VG YL+ +HLND+K+ FGS D H ++G G Sbjct: 303 DTCHAFAAGHDLRTPEAFAETLKRFDEIVGLGYLKALHLNDSKAPFGSHRDLHANIGTGF 362 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI------------NPDIWAEEIAWLKAQ 278 +G AF ++ + +P++LET N +WA+EI L++ Sbjct: 363 LGLRAFHNLVNCEAVQRLPMVLETPIEEKGADGKMVENKQVWADEIKLLESL 414 >UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofung) n=5 Tax=Eurotiomycetidae RepID=C8V628_EMENI Length = 544 Score = 353 bits (906), Expect = 5e-96, Method: Composition-based stats. Identities = 117/285 (41%), Positives = 172/285 (60%), Gaps = 4/285 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAHVSAAGG+ NA + + AFALF K+QR+W PL + D F C+++ Y Sbjct: 134 FVGAHVSAAGGVFNAVNNSKHVGGNAFALFLKSQRKWDNPPLQDEHRDNFVKLCKEHDYD 193 Query: 63 SAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A+ +LPH SYL+NL +++ DAF+D+++RCE LG+ L NFHPGS + Sbjct: 194 AAKYVLPHGSYLVNLAQEDEAKAKQAYDAFLDDLRRCEALGIRLYNFHPGS-TNKTPLSS 252 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV--EDKSRVGVCID 179 LAR+A+++ AL T V V+E G GS +G ++ + E SR+GVCID Sbjct: 253 ALARLAKALTNALAATSNVVPVLETMCGHGSTIGGSLSEFRDLLALIPKEYHSRIGVCID 312 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH+FAAGYDL +PA + +F +G ++LR +HLND+K+ GS+ D H ++G G + Sbjct: 313 TCHSFAAGYDLVSPAGFQAFLKEFEDLIGIQHLRALHLNDSKAPGGSKRDLHANIGTGFL 372 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 G AF +M + RF+G+P+ILET I A K + E+ V Sbjct: 373 GLRAFHNVMNEPRFEGLPMILETPIDRIPAAATNRAKQEAAEEDV 417 >UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Trichocomaceae RepID=B6QA11_PENMQ Length = 562 Score = 352 bits (903), Expect = 9e-96, Method: Composition-based stats. Identities = 110/264 (41%), Positives = 167/264 (63%), Gaps = 4/264 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAHVSAA G+ N+ + + I AFALF K+QR+W PL + ++F C Y Y Sbjct: 166 FVGAHVSAAKGVQNSILNSVHIGGNAFALFLKSQRKWDNPPLQDEHKEQFLKFCRDYEYD 225 Query: 63 SAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A+ ILPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ Q + E Sbjct: 226 AAKYILPHGSYLVNLAQEDETKAKQAYDSFLDDLKRCEKLGIRLYNFHPGAA-GQSTVES 284 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCID 179 ++R+A+S+ AL T+ V V+E G G+ LG L A+I + + SR+GVC+D Sbjct: 285 AISRLAKSLTKALAATETVIPVLETMCGHGTTLGGDLSELGAVISQIPEQYHSRIGVCVD 344 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH+F+ GYDL P + +F +G K+LR +HLND+K+ GS+ D H ++G G + Sbjct: 345 TCHSFSYGYDLVAPEGFKAFMQEFDEKIGLKFLRALHLNDSKAPKGSKRDLHANIGTGFL 404 Query: 240 GHDAFRWIMQDDRFDGIPLILETI 263 G AF +M ++RF G+P+ILET Sbjct: 405 GLRAFHNVMNEERFQGLPMILETP 428 >UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Eurotiomycetidae RepID=B8N4I3_ASPFN Length = 569 Score = 351 bits (900), Expect = 2e-95, Method: Composition-based stats. Identities = 110/263 (41%), Positives = 164/263 (62%), Gaps = 4/263 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVSAA G+ NA + I AFALF K+QR+W PL D F+ C + Y + Sbjct: 158 VGAHVSAAKGVFNAINNSMHIGGNAFALFLKSQRKWDNPPLQDDHRDNFRRLCIENKYDA 217 Query: 64 AQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ ILPH SYL+NL +++ D+F+D+++RCE LG++L NFHPGS Q + D Sbjct: 218 AKHILPHGSYLVNLAQEDKAKAKQAYDSFLDDLRRCEALGINLYNFHPGSA-NQSNFSDA 276 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV--EDKSRVGVCIDT 180 L+R+A+++ AL T VT V+E G G+ +G K ++ + E R+G+CIDT Sbjct: 277 LSRLAKALTNALAATSTVTPVLETMCGHGTTIGGKLTEFRDLLAMIPQEYHPRIGICIDT 336 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH+FAAGYDL +P + +F +G ++LR +HLND+K+ GS+ D H ++G G +G Sbjct: 337 CHSFAAGYDLASPEGFKAFMKEFEDVIGLQHLRALHLNDSKAPRGSKRDLHANIGTGFLG 396 Query: 241 HDAFRWIMQDDRFDGIPLILETI 263 AF +M + RF+G+P++LET Sbjct: 397 LRAFHNVMNEPRFEGLPMVLETP 419 >UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=END4_HERA2 Length = 293 Score = 350 bits (898), Expect = 4e-95, Method: Composition-based stats. Identities = 121/281 (43%), Positives = 156/281 (55%), Gaps = 5/281 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAHVS GGL A RA +FTK+QRQW A PLT F+AA Sbjct: 1 MPNLGAHVSTVGGLQTAFERAQATTCHVIQIFTKSQRQWNAKPLTAADCANFQAAHRDAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINLG P EKS AF E++RC+QLG+ L HPG+H+ E Sbjct: 61 MPP--LIAHDSYLINLGSPDNGLWEKSIAAFRVELERCQQLGVGSLVTHPGAHVG-SGEA 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+ ++ L + G ++E TAGQG+ LG FEHLA +I+ + R+G+C Sbjct: 118 AGLDRVGAALRRLLAEDVGGETQILLEITAGQGTALGHSFEHLARLIELCDGHPRLGICF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH AAGYD RT + TF F R +G LR HLND+K+ GSRVDRH +GEG Sbjct: 178 DTCHGLAAGYDFRTAEGYQTTFDHFDRLIGIDRLRAFHLNDSKNDLGSRVDRHTHIGEGF 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 +G + F IM D RF IP+ LET + +I L + Sbjct: 238 VGLEGFELIMNDPRFQTIPMALETPKEPDESADIRNLATLR 278 >UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Planctomycetaceae RepID=A6CAW7_9PLAN Length = 285 Score = 349 bits (896), Expect = 7e-95, Method: Composition-based stats. Identities = 116/269 (43%), Positives = 155/269 (57%), Gaps = 5/269 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAH S AGG A AAE + +FTKN QWRA PLT + I+ F+ E Sbjct: 1 MPLLGAHQSIAGGYYKAVDTAAEFEMDCVQIFTKNNNQWRAKPLTDKDINLFREHLESTG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H SYLINL P E KS DA + E+QR E LGL HPGS + SEE Sbjct: 61 VGRP--CSHMSYLINLASPKEELWNKSIDAVVVELQRAEALGLEGAVMHPGSFVT-SSEE 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L RI +I+ +T+G +E TAGQGSNLGF+FE LA +++ V+D R+G+C+ Sbjct: 118 EGLDRIVAAIDRIHQETEGFQTQIWLETTAGQGSNLGFRFEQLAYLLNQVQDGGRLGICV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGY L +E + T ++ + +GF + HLND+K FGSR DRH ++G G Sbjct: 178 DTCHIFAAGYPLIKKSEYKATMSELDQVIGFDRICAFHLNDSKCEFGSRKDRHENIGRGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI 267 +G + FR ++ D F P+ LET + Sbjct: 238 LGLEPFRHLLNDPVFQDRPMYLETPKDEE 266 >UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (Vinckeia) RepID=Q4YZM8_PLABE Length = 559 Score = 346 bits (887), Expect = 6e-94, Method: Composition-based stats. Identities = 117/238 (49%), Positives = 164/238 (68%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 Y+GAH+SA+GG+ NA I + + AFALF KNQR+W + PLT + I +F C+KY++ Sbjct: 224 VYLGAHISASGGVQNAPINSFNVSGLAFALFLKNQRKWESPPLTEENIKQFNENCKKYNF 283 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SYLINL +P E EKS +F+D+++RCEQL + L NFHPGS + S E Sbjct: 284 DKNLILPHGSYLINLANPDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQ 343 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + I++ IN A +T V V+EN+AGQ +++G KFEHL II ++DK R+GVC+DTC Sbjct: 344 GIKNISDCINRAHKETSNVIIVLENSAGQKNSIGSKFEHLRDIISQIDDKERIGVCLDTC 403 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 H FAAGYD+++ + E+ +F V KYL+ +HLND+KS GS +DRH ++G+GNI Sbjct: 404 HTFAAGYDIKSYEKFEEVMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGNI 461 >UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix orenii H 168 RepID=END4_HALOH Length = 278 Score = 346 bits (887), Expect = 8e-94, Method: Composition-based stats. Identities = 100/280 (35%), Positives = 144/280 (51%), Gaps = 4/280 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HVS AGGL A RA +I A +F KN R W+ ++ I + K +K + Sbjct: 2 RLGKHVSIAGGLYKATDRATKIGCNALQIFVKNPRGWKIKEVSDSEIKKLKDNIKKENMY 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ++ H SYLIN+ P E EKS ++ E +R E + HPGSH + Sbjct: 62 P--LVVHSSYLINMATPRDELWEKSVNSLKKEYKRTELINADYFVVHPGSHTGK-GLHFG 118 Query: 123 LARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + RI E+IN + + G ++EN AG GS++G F L II+ V+D +R+GVC+DTC Sbjct: 119 INRIIEAINSVFGEVKNGPQLLLENVAGAGSSIGSNFTELRDIINKVDDYARIGVCLDTC 178 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAGYDLR E+ DF + +G L+ +HLND+K S D H +GEG IG Sbjct: 179 HAFAAGYDLRYEDGLEELLNDFDKIIGLDLLKVIHLNDSKYGLASNKDEHAHIGEGEIGE 238 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 I+ P ILET +++ + + + Sbjct: 239 KGISNIINHPLLKDKPFILETPKFSGRDKDVELVNLLRRD 278 >UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057Y5_BUCCC Length = 290 Score = 343 bits (881), Expect = 4e-93, Method: Composition-based stats. Identities = 138/279 (49%), Positives = 184/279 (65%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +KYIG H + +GGL + ++A +++ATAF+ F KN +W PL TI F+ C KY+ Sbjct: 2 IKYIGVHCNTSGGLEKSVLQANKLNATAFSFFVKNPLRWNTLPLQQSTIKSFRKFCNKYN 61 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y++ QILPH SYLINLGHP E +KS I+E+ C LGL ++N HPGS L +I+E+ Sbjct: 62 YSTLQILPHSSYLINLGHPDKEKKKKSCKTLIEEINFCNLLGLVMINIHPGSSLKKITEK 121 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 CL I+ SIN L KT + V+ENT+GQG N+G+ FEHLA II+ V +KSR+GVC+DT Sbjct: 122 KCLENISNSINYILKKTNNIIIVLENTSGQGGNMGYCFEHLAFIINKVRNKSRIGVCLDT 181 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FA+GY L F F +G KYLRG+HLND+K F S++DRH +LG GNI Sbjct: 182 CHLFASGYQLNNKNSFLNIFYRFHELIGLKYLRGIHLNDSKGKFNSKLDRHENLGYGNIK 241 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 F I++ F+ IP+ILET + IW +EI WLK Q Sbjct: 242 TSVFSKIVRVIEFNNIPIILETKDASIWKKEIQWLKKQS 280 >UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblastina RepID=Q8SQT2_ENCCU Length = 275 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 167/277 (60%), Gaps = 7/277 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K IGAH+S + G+ + + A+F K+QR++ P+ + F+A Sbjct: 3 KLIGAHLSISKGIHTIQAQMELLGLDTCAIFLKSQRRYLTPPMKQGAAEMFRAHVR---- 58 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I+PH SYLIN G+P ++KS + +D+++RC+ LG+ + N HPGS + + Sbjct: 59 HPELIVPHGSYLINFGNPD--LVDKSMECLVDDLERCKSLGIGMYNMHPGSSKGK-GRAE 115 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 CL I +N AL + QGVT +IEN AGQGS +G FE L II G+ED+ R+GVC+DTC Sbjct: 116 CLRSIGHHVNTALSRVQGVTVLIENMAGQGSVVGSSFEELRDIIGGIEDRERIGVCLDTC 175 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H F AG+D+ T + + F R VG ++L+ MH+ND+K GS+ DRH S+G+G IG Sbjct: 176 HLFGAGFDITTEEKFLEVMERFDRVVGLEFLKAMHINDSKEALGSKKDRHESIGKGMIGE 235 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 AFR+IM FD IPLILET +P + EE +L++ Sbjct: 236 KAFRFIMNSKVFDNIPLILETPDPGKYKEEADFLRSL 272 >UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacterium RepID=B3XXI6_9BACT Length = 290 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 110/278 (39%), Positives = 148/278 (53%), Gaps = 8/278 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAH+SAAGG+ A RA E +FTK+ RQW+A PLT + ID ++ A +Y Sbjct: 2 RIGAHISAAGGVYKAFARAREAGCETMLVFTKSNRQWKAKPLTEKDIDLYQQARAEYS-D 60 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H SYLIN+ P + EKS A E++R L + + FHPGS + + E Sbjct: 61 IDPVAVHASYLINIASPKDDLWEKSYQALKVEVERAGALDIPFITFHPGSFV-KSDAESG 119 Query: 123 LARIAESINIALDKT----QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 LARI + LD+T T +E AGQG+NLG+ FE LA ++DG+ R+G+C Sbjct: 120 LARIITGVKRLLDETAVTAPNTTVCLETMAGQGTNLGYMFEQLATLLDGIGRGPRLGICF 179 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+RTP T F +G ++ H ND+K G R DRH +G+G Sbjct: 180 DTCHVFAAGYDIRTPEAYAATMQAFDNVIGLDQIKVFHFNDSKFELGQRKDRHAHIGDGF 239 Query: 239 IGHDAFRWIMQDDRFDGIPLILETIN--PDIWAEEIAW 274 IG + F M D R+ +ET D EI Sbjct: 240 IGAEGFANFMNDPRWANHAAHIETPKTEKDDDGSEIEM 277 >UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R9_9PLAN Length = 321 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 121/308 (39%), Positives = 161/308 (52%), Gaps = 33/308 (10%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQ-------------------------- 36 +GAH+S AGGL AA AA + +FT + Sbjct: 14 LLGAHMSIAGGLHKAAEAAANVRCDVVQIFTGSPSQWPFVQASRAKKTDVQFDGLLTKNN 73 Query: 37 RQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQ 96 QWRA ++ + +FK A ++ T L H SYLINL P E +KS +A + E+ Sbjct: 74 NQWRAKAISDKEEQQFKEALARHKITLP--LAHASYLINLASPDEELWQKSIEAMVIELG 131 Query: 97 RCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNL 154 R QLG+ + HPGS SE LARIA +I+ T ++ENTAGQGSNL Sbjct: 132 RASQLGIFGVVMHPGSFTT-SSEAVGLARIAAAIDKIHTLAPDATAQILLENTAGQGSNL 190 Query: 155 GFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRG 214 G+KFEHL II V+ R+GVCIDTCH FAAGY L T E + TF VG +R Sbjct: 191 GWKFEHLGEIIAQVKQADRLGVCIDTCHTFAAGYPLGTKEEFDATFESLENAVGINRIRA 250 Query: 215 MHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAE--EI 272 HLND+K GSRVDRH +G+G +G + FR ++ D RF +P+ LET D E ++ Sbjct: 251 FHLNDSKKELGSRVDRHEHIGQGCLGLEPFRHLLNDKRFTKVPMYLETPKEDADEEPWDV 310 Query: 273 AWLKAQQT 280 L+ ++ Sbjct: 311 VNLRTLRS 318 >UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9J8_PLALI Length = 291 Score = 341 bits (874), Expect = 2e-92, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 155/284 (54%), Gaps = 5/284 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S AGG A + LFTKN QWR PLT I +F+ + + Sbjct: 6 LGAHMSIAGGCYKALEAGHRLGMGCVQLFTKNNNQWRGKPLTEDDIRQFQTTWKSTGIQA 65 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H SYLINL P KS DA +DE++R E LG+ + HPGS + + + E + Sbjct: 66 T--CAHASYLINLASPDDVLWNKSCDALVDELERAEALGIPGVVLHPGSAV-KSTPEAGI 122 Query: 124 ARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 R+ E+++ K +G +E TAGQGS LG +FE L+ ++DGV + R+G+CIDTC Sbjct: 123 TRVIEALDDVHAKCKGFRAQVWLETTAGQGSCLGARFEELSQMLDGVREPDRIGICIDTC 182 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY L T + T F++ +GF +R HLND+ GSRVDRH +GEG +G Sbjct: 183 HIFAAGYPLHTADDYADTLEKFSQKIGFDRVRAFHLNDSMKGLGSRVDRHAHIGEGQLGR 242 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 F ++ DDR IP LET + ++ + Q ++ +A Sbjct: 243 IPFSRLLHDDRLSHIPKYLETEKGERDGVDLDLINLQTLQQLIA 286 >UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=END4_METMJ Length = 282 Score = 340 bits (872), Expect = 4e-92, Method: Composition-based stats. Identities = 98/268 (36%), Positives = 137/268 (51%), Gaps = 5/268 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG + A RA + F +F++N R W+ L F+AA Sbjct: 1 MVLVGCHVSIAGSIDRAVGRALDAGCDTFQIFSRNPRGWKVKDLDPGLAGAFRAAVSASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL N P E EKS A E++RC LG+ L H G H E Sbjct: 61 IGP--VVDHMPYLPNPASPDAEIYEKSVAALAGELRRCSLLGIPYLVTHLGHHRG-AGME 117 Query: 121 DCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 R+ +IN A + V ++ENTAG+ +++G ++L+ I+DG++ K RVG+C Sbjct: 118 AGQERVVAAINRAFEDAGESDVMLLLENTAGEKNSVGTTVDNLSRIVDGIDAKERVGICF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGYDLRT + + + LR +HLND K GS +DRH +G G Sbjct: 178 DTCHAFAAGYDLRTAEGVDAVLGEIDDAIDLSRLRVVHLNDCKGDLGSGLDRHEHIGLGR 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD 266 IG D FR I++ +PLI ET + Sbjct: 238 IGEDGFRHILRHPAVRRLPLICETPVDE 265 >UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 Tax=Schizosaccharomyces pombe RepID=APN1_SCHPO Length = 342 Score = 339 bits (869), Expect = 9e-92, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 159/257 (61%), Gaps = 4/257 (1%) Query: 23 EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS-AQILPHDSYLINLGHPVT 81 I A + A F K+QR+W + L+ +F + + + Q+L H SYLIN+ + Sbjct: 14 YISANSCAFFVKSQRKWTSPDLSEDVAQKFLETASEMKFDASKQVLVHGSYLINMANADE 73 Query: 82 EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVT 141 + E++ + F+D+++RCE+LG+ L NFHPGS ++E+ + +AE IN A ++T+ V Sbjct: 74 QKREQAFNCFVDDLKRCERLGVGLYNFHPGSTA-SCTKEEGINNLAECINRAHEETKSVI 132 Query: 142 AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFA 201 V EN AGQG+ LG F+ AA+ +++ R VC+DTCH FAAGYD+RT +K Sbjct: 133 IVTENMAGQGNCLGGTFDDFAALKSKIKNLDRWRVCLDTCHTFAAGYDIRTEESYKKVID 192 Query: 202 DFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILE 261 +F VG KY+ G HLND+K+ GS D H ++G G +G + FR IM D R+DGIPL+LE Sbjct: 193 EFDEKVGAKYVSGWHLNDSKAPLGSNRDLHENIGLGFLGLEPFRLIMNDSRWDGIPLVLE 252 Query: 262 TI--NPDIWAEEIAWLK 276 T +P+ W +E+ L+ Sbjct: 253 TPAKSPEQWKKEVELLR 269 >UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VTW7_PYRTR Length = 471 Score = 338 bits (868), Expect = 1e-91, Method: Composition-based stats. Identities = 119/291 (40%), Positives = 168/291 (57%), Gaps = 21/291 (7%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHVS AG + A AFA+F KNQR+W + + + +D F CE + Sbjct: 124 RIGAHVSIAG-----VAKTDLTSANAFAMFMKNQRKWESKDIDQEHVDFFVKWCEDHKIN 178 Query: 63 SAQI-LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A+ LPH SYL+NL HP ++S D+F++++ RC +LG+ L NFHPG+ + E+ Sbjct: 179 AAECCLPHGSYLVNLAHPDPAHKKQSYDSFLNDLSRCHRLGIRLYNFHPGNS-NATTREE 237 Query: 122 CLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + I+E+IN A + V V+E A G+ +G F +AAII V DKSRVGVC+D Sbjct: 238 GIITISENINQAHADPASGKVVTVLETMASLGNTIGGNFTDIAAIIRLVNDKSRVGVCLD 297 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYDLRTP KT F + +G +YL+ H+ND+K+ F S D H +G G + Sbjct: 298 TCHVFAAGYDLRTPEAYAKTIDKFDKEIGLEYLKAFHVNDSKAPFSSHRDVHARIGTGYL 357 Query: 240 GHDAFRWIMQDDRFDGIPLILETI------------NPDIWAEEIAWLKAQ 278 G AF +M D+RF G+P++LET + WA EI L++ Sbjct: 358 GLQAFHNLMNDERFHGLPMVLETPCDTLDADGKKVEDKGSWAREIKMLESL 408 >UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=END4_ALKOO Length = 281 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 6/285 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G A I+A F FT+N R +A + + ++ E+ Sbjct: 1 MLNIGCHLSSSKGYKAMGKDAISINANTFQFFTRNPRGSKAKAMDLKDVEGLLQLMEENK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A+IL H Y +N E + + +D++ R E L + NFHPG+HL Q E Sbjct: 61 F--AKILAHAPYTLNPCSADERTREFAMEVLVDDLARMEYLPNNFYNFHPGNHLKQ-GVE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I S+N L Q T ++E +G+G+ +G FE L IIDG++ ++VGVC+DT Sbjct: 118 VGIEYIVNSLNDVLKPDQTTTVLLETMSGKGTEIGKNFEELKQIIDGIKLSNKVGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH + AGYD+ + + +F R +G L +HLND+K+ F S DRH +GEG IG Sbjct: 178 CHVYDAGYDIV--QDLDGVIQEFDRIIGLDKLYAIHLNDSKNPFASHKDRHAKIGEGYIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTEKAV 284 + I+ + +P LET N + EEI L+ ++++ Sbjct: 236 EEGIVRIINHPKLRHLPFFLETPNDLEGHGEEIKMLREAYRDESI 280 >UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental samples RepID=B3V640_9ARCH Length = 280 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 100/280 (35%), Positives = 156/280 (55%), Gaps = 6/280 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HVS AG + + RA ++ F ++T+N R W+ + L I FK+ + + Sbjct: 2 KLGVHVSIAGSIDLSVDRARSLNLNTFQIYTRNPRGWKFSDLKESNILNFKSKIISENIS 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + ++ H YL NL P + S + E++RC +LG+ + H GSHL E Sbjct: 62 A--VVCHMPYLPNLSSPKDDLHNMSIVSLASELERCNKLGIDYVVTHIGSHLG-SGLEQG 118 Query: 123 LARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L R+ ++ N A+ D ++ENTAG +N+G KFE L I D ++DKSR+G C DTC Sbjct: 119 LNRVVKACNTAMSDSANNTMIILENTAGTKNNVGSKFEELKYIFDNIKDKSRIGFCFDTC 178 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAGYDL + T F + +G KYL+ +HLND+K G+ +DRH +G+G+IG Sbjct: 179 HAFAAGYDLSSRKSVIDTLDQFNKIIGMKYLKVVHLNDSKGELGNGLDRHQHIGKGHIGE 238 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWA--EEIAWLKAQQ 279 + FR ++++ +PLILET + E I +++ + Sbjct: 239 EGFRQLLKNPDIKQLPLILETPIDENIGDSENIEKIRSFE 278 >UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae RepID=END4_PETMO Length = 287 Score = 336 bits (863), Expect = 4e-91, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 153/284 (53%), Gaps = 4/284 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G A I F +FT + R W+ P ++ FK A +++ Sbjct: 1 MIKIGAHMKISKGFTKVPPDTANIGGNTFQIFTSSPRVWKVNPPKENDVEGFKNAMTEFN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +L H SYLINL P + EKS A I+E++ +QLG+ NFHPGSHL + EE Sbjct: 61 INFEDVLVHSSYLINLASPKDDIREKSITAMIEEIKATDQLGILHYNFHPGSHLGE-GEE 119 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + +I E ++I + Q VT ++EN A +GSN+G+ E L II+ K R+G+ Sbjct: 120 FGINKILEGLDIIFKEVQNTKVTILLENVAQKGSNIGYSMEQLGRIINKSPWKERLGITY 179 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH F + YD+R E ++ + + +G L+ +HLND+K G+ DRH +G+G Sbjct: 180 DTCHGFDSNYDIRKKEEVQRLLDEIDKYIGLNKLKMIHLNDSKYDVGAAKDRHEFIGKGY 239 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI-WAEEIAWLKAQQTE 281 IG + F+ + D +PLILET D +++I +K E Sbjct: 240 IGREGFKTFLSFDEISKLPLILETPGDDPEHSQDIKVVKEIFKE 283 >UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=END4_CLOBB Length = 277 Score = 336 bits (863), Expect = 5e-91, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 6/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G N A +I A F FT+N R +A + + EF ++ + Sbjct: 1 MLNIGCHLSSSKGFKNMGENALKIGANTFQFFTRNPRGSKAKDIDENDVKEFLELAKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + +IL H Y +N E + + D+++R E L +L NFHPGSH+ Q + E Sbjct: 61 F--CKILAHAPYTLNACSADERNREFAIEIMADDLKRMEYLPNNLYNFHPGSHVKQGT-E 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I+ ++N L K Q ++E +G+G+ +G FE +A II VE K VGVC+DT Sbjct: 118 VGIEYISSALNSILKKDQTTKVLLETMSGKGTEVGRNFEEIAEIIKRVELKEHVGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH AGYD+ E +K +F +G L +HLND+K+ F S DRH ++G G IG Sbjct: 178 CHIHDAGYDIVN--ELDKVLEEFNSIIGLDKLDAIHLNDSKNPFESHKDRHETIGNGYIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 +A I+ + +P LET N + + EI LK+ + Sbjct: 236 LEAVTNIINHPKLCHLPFFLETPNELEGYKNEIELLKSAYKK 277 >UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organisms RepID=END4_CLOD6 Length = 278 Score = 336 bits (861), Expect = 8e-91, Method: Composition-based stats. Identities = 94/283 (33%), Positives = 155/283 (54%), Gaps = 6/283 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G H+S A G ANAA A I A F F++N R A + I +F+ ++ + Sbjct: 1 MIKLGTHLSIAKGFANAAETAVYIGANTFQFFSRNPRGGNAKEFDEKDIIKFQEIRKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A +L H Y +NLG + E + ++++R + LG+ + FHPGSH+ + Sbjct: 61 F--APLLAHAPYTMNLGGTKDDVYEFATRVIDEDIRRMDSLGIEYMCFHPGSHVGG-GVD 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + RI + +N A+ + +T ++E +G+G+ +GFKFE L +IID +E K ++GVC+DT Sbjct: 118 FGIDRIVKGLNNAIKGDENITILLETMSGKGTEIGFKFEQLKSIIDKIEHKEKIGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F+AGYD+ + + +F + +G + L+ +HLND+ FG + DRH +GEG IG Sbjct: 178 CHIFSAGYDIVN--DLDGVLEEFDKVIGIERLKTVHLNDSMMPFGDKKDRHAPIGEGKIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEK 282 A M+ +P LET + + E+ +K + K Sbjct: 236 LKALIDFMEHPSLKHLPFFLETPFDDEGHKRELKMIKEILSSK 278 >UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae RepID=END4_THENN Length = 287 Score = 335 bits (860), Expect = 9e-91, Method: Composition-based stats. Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 6/286 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G +I +F +F N R W+A T + +FK +K+ Sbjct: 1 MIKIGAHMPISKGFDRVPKDTIDIGGNSFQIFPHNARSWQAKLPTDEMATKFKREMKKHR 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H YL+NL P + +KS D E++ C +LG+ LN HPGSHL EE Sbjct: 61 IDWENAFCHCGYLVNLASPKEDIWQKSVDLLKTEVEICRKLGIKYLNIHPGSHLG-TGEE 119 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + RIA +N L+ T+ V ++EN + +G N+G++ EHL IID V+ K RV + DT Sbjct: 120 EGINRIARGLNEVLNNTEDVIILLENVSQKGGNIGYRLEHLKRIIDLVDQKDRVAITYDT 179 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F +GYD+ E ++ G + L+ +HLND+K G+ DRH +G G IG Sbjct: 180 CHGFDSGYDITKKEGVESLLSEIENLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIG 239 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEI----AWLKAQQTE 281 F +P ILET + AE+I ++ + E Sbjct: 240 EAGFAVFFSFKEVQRVPWILETPGGNEEHAEDIKKVSEIIEKYRIE 285 >UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota RepID=END4_NITMS Length = 279 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 150/277 (54%), Gaps = 2/277 (0%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG HVS +G + + A E + +AF +FT+N R W A LT I FK+ ++ Sbjct: 3 IGCHVSISGSIDKSVDNAVERECSAFQIFTRNPRGWHAKTLTKDDITNFKSKLKESKIDR 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H YL NL P + EKS +DE++RC QLG+ L H GSHL EE + Sbjct: 63 FATCAHMPYLPNLATPKEDGFEKSVKTLVDEVERCAQLGIPYLVTHLGSHLG-TGEEAGI 121 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 ++ + + A V ++ENTAGQ +++G F+ L I ++ + GVC+DTCHA Sbjct: 122 KKLVKGLTEAGKTKNDVMILLENTAGQKNSVGSDFKQLGEIFKQLKPAKKFGVCLDTCHA 181 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 F GYDLRT A+ ++TF++F + VG L+ +HLNDAK G +DRH+ LG G IG Sbjct: 182 FVFGYDLRTEAKVKETFSEFDKYVGIDNLKILHLNDAKGDLGCNLDRHYHLGMGGIGEKG 241 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 I++ IP+ILET D ++ ++ + Sbjct: 242 ISAIVKFANKKKIPIILETPIDDD-RDDFENIRKAKE 277 >UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METPE Length = 286 Score = 335 bits (859), Expect = 1e-90, Method: Composition-based stats. Identities = 100/284 (35%), Positives = 145/284 (51%), Gaps = 8/284 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS AG +A A RA ID F +F++N R W PL + F+ A Sbjct: 1 MVKIGVHVSIAGSIARAVERAMAIDCDTFQIFSRNPRGWTFKPLAEEDAALFQGALGTSG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 A + H YL NL P E KS +A +E+ RC L + L H G H+ + Sbjct: 61 IGPA--VVHMPYLPNLASPKEEIWRKSVEALTEELHRCSMLDVPYLVTHLGHHMGEGIG- 117 Query: 121 DCLARIAESINIALDKTQG----VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 R+ ++I+ A ++ V ++ENTAG+ +++G +FE + I + D R+GV Sbjct: 118 AGEGRVQQAIDAAFSQSDPGSSRVMLLLENTAGEKNSVGSRFEEIGRIRESCSDPDRIGV 177 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCHAFAAGYDLR +T F +G ++L +HLNDAK+ GS +DRH +G Sbjct: 178 CMDTCHAFAAGYDLRNEVGLSRTLEAFEDGIGIEHLHVIHLNDAKADIGSHLDRHTHIGL 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 G IG + I+ +P I ET D + A ++A + Sbjct: 238 GMIGEEGCSGILTHPTLASLPFICETP-EDAVRDNAANIRAVRR 280 >UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples RepID=B3V621_9EURY Length = 287 Score = 333 bits (854), Expect = 5e-90, Method: Composition-based stats. Identities = 131/290 (45%), Positives = 181/290 (62%), Gaps = 15/290 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAHVS AGGL NA + A EI+A F +F+KNQRQW A PLT + ++ FK + Sbjct: 2 RLGAHVSVAGGLQNAILWALEIEADTFQMFSKNQRQWIAKPLTDKEVEAFKTPLAETDLG 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL-------- 114 I HDSYLIN+G P ++++ AF++E RCE LG++ LNFHPGSH Sbjct: 62 PLMI--HDSYLINMGSPDETKGKRAQVAFLEEYHRCEALGVAYLNFHPGSHTHPKKDMRD 119 Query: 115 MQISEEDCLARIAESINIALDKTQGV--TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 + + + L RIA +N L++T+G VIEN AGQG+N+G KFE + IID + DK Sbjct: 120 DKQTRNEALERIANHMNKTLEETKGYGSKLVIENAAGQGTNVGIKFEEIKHIIDHINDKK 179 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 RVGVCIDT HA+A+GYD R + ++ + DF VG +YL +HLND+KS GSRVDRH Sbjct: 180 RVGVCIDTQHAWASGYDWRN--DFDQIWDDFEEIVGMEYLVALHLNDSKSDLGSRVDRHD 237 Query: 233 SLGEGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTE 281 ++G G +G + F+ MQ+ R + + LET P++W EIA L+ + Sbjct: 238 NIGVGKLGKNTFKSFMQEKRLEHLAGYLETPGGPEMWKPEIAVLRKLAEK 287 >UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=Q4PHV5_USTMA Length = 552 Score = 329 bits (843), Expect = 9e-89, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 164/305 (53%), Gaps = 43/305 (14%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +IGAH+S+AGG+ NA + A I AF+ F + + QW + P+ + ++FK ++ + Sbjct: 157 LFIGAHISSAGGVENAPLNALRIGGNAFSCFVRPKMQWASNPIRDTSAEQFKQHVMQHSF 216 Query: 62 TSAQ------------------------ILPHDSYLINLGHPVTEALEKSRDAFIDEMQR 97 A ++PH YL+NL +P EKS AFID++QR Sbjct: 217 MPAALSVKKEQDIEQETHRLSDVEEYGYVVPHGCYLVNLANPDESKREKSFQAFIDDLQR 276 Query: 98 CEQLGLSLLNFHPGSHLM-----------------QISEEDCLARIAESINIALDKTQGV 140 CEQLG+ L NFHPGS + + ++ D A +A IN A T V Sbjct: 277 CEQLGIRLFNFHPGSMTVASIYGEEPPDVGPRSEVRAAKADACALVASYINRAHSLTSSV 336 Query: 141 TAVIENTAGQGSN--LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEK 198 +IEN AG ++ LG LA+II GV+DKSRVGVCIDTCHAFAAGYDL TPA Sbjct: 337 IILIENMAGSKNDTILGSSLADLASIISGVQDKSRVGVCIDTCHAFAAGYDLTTPAAYAT 396 Query: 199 TFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPL 258 +G++ +R HLND+K + DRH ++ G+IG F I+ D R++GIPL Sbjct: 397 FTELIDSKIGWQTVRAFHLNDSKFPLACKRDRHANIARGHIGLGGFWNIVNDQRWNGIPL 456 Query: 259 ILETI 263 ILET Sbjct: 457 ILETP 461 >UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterineae RepID=A7H9B2_ANADF Length = 280 Score = 328 bits (842), Expect = 1e-88, Method: Composition-based stats. Identities = 116/279 (41%), Positives = 154/279 (55%), Gaps = 11/279 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH AGG++ A RA A +FT+N R W A PL + I FK ++ Sbjct: 6 LLGAHEGIAGGVSTAFTRAEADGADCLQIFTRNARGWAAKPLEAEEIARFKGEAKRTKLP 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +A H SYLIN + KS DE+ RCE LG+ L FHPGSH E + Sbjct: 66 TA---AHSSYLINCCSEDADIRRKSWAGLADELGRCEALGIPSLIFHPGSH---CDEAEG 119 Query: 123 LARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR--VGVCID 179 + +AE++ ALD G ++E TAGQGS+LG++FEH+AAI D V R VGVC+D Sbjct: 120 IRLVAEAMERALDAVPGKARLLVETTAGQGSSLGWRFEHVAAIRDAVPAAKRRRVGVCVD 179 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYD+ A +T + R VG +R HLND+K G RVDRH +GEG + Sbjct: 180 TCHVFAAGYDITHEAGYHRTIEELDRVVGLANVRAFHLNDSKKPLGCRVDRHEHIGEGAM 239 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 G FR+++ D RF +P +ET + W E I L+ Sbjct: 240 GITPFRFLVNDARFAELPGFVETES--RWKENIEVLRGL 276 >UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales RepID=END4_CHLT2 Length = 288 Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats. Identities = 118/280 (42%), Positives = 162/280 (57%), Gaps = 7/280 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAH SAAGGL NA +I AT LFT NQRQW+ LT + +D+F+ A + Sbjct: 10 PLLGAHTSAAGGLHNALYEGRDIGATTVQLFTANQRQWKRRALTQEMVDQFRIALNETSL 69 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + I+ H YL N G P E LEK+R E+ C LG+S +NFHPG+ L S+E Sbjct: 70 S--YIMSHAGYLNNPGAPNPEILEKTRVCMHQEIADCISLGISFVNFHPGAAL-SDSKES 126 Query: 122 CLARIAESINI---ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 CL R S + + + ++E TAGQGS +G FE LA +I G++ +GVC+ Sbjct: 127 CLDRAITSFSQMAPLFENHPPLVVLLETTAGQGSLIGSSFEELAYLIQGIKALIPIGVCL 186 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+ + A E+ F +G +LR +HLND+ G DRH +GEG Sbjct: 187 DTCHIFAAGYDISSVAGWEQVLKHFDAVIGLSFLRAIHLNDSVFALGKNKDRHAPIGEGC 246 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKA 277 IG D+F ++MQD+R +P LET PD+W +EI +L+ Sbjct: 247 IGSDSFCFLMQDERTRMLPKYLETPGGPDLWTKEIRYLQK 286 >UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMN6_9BACT Length = 273 Score = 325 bits (833), Expect = 1e-87, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 144/278 (51%), Gaps = 7/278 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAH S + + + RA +F KN +W ++ + ++F+ + Sbjct: 2 LIGAHQSISKSIDLSIKRALADGCECLQVFVKNNNRWEGKVISEEEAEKFRKGLADSGF- 60 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ++ H SYLINL + KS A DE+ RC++L + HPGSH+ + E+ Sbjct: 61 --KVCAHSSYLINLASFKEDTYIKSVKACNDELSRCDRLNIPFYVIHPGSHVGE-GEKKG 117 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + RIA++I+ + ++E AGQG+N+G+ E++ II+ K ++G+C D+CH Sbjct: 118 IRRIADTIDRVYEGGYQCMTLLEMVAGQGTNIGYSIENMLDIIELSASKDKIGICFDSCH 177 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAG+DL+ + + + G ++ HLND+K SR DRH +G+G IG D Sbjct: 178 MFAAGFDLK--DDYDNVTKELFEAFG-DKVKVFHLNDSKKPLNSRRDRHELVGKGEIGED 234 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 F+ + D RF I ILET + + +EI LK+ + Sbjct: 235 FFKKAVNDARFSDILGILETPVEENYKKEIELLKSYRE 272 >UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae RepID=END4_AQUAE Length = 282 Score = 322 bits (827), Expect = 7e-87, Method: Composition-based stats. Identities = 88/267 (32%), Positives = 144/267 (53%), Gaps = 7/267 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAHVS+AG + RA +I A F F ++ R W + +T F + + Sbjct: 1 MALFGAHVSSAGSILKTFKRAKDIGAEVFQFFLRSPRAWYWKGVDKETKQAFIEKLKDFK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL+NL P E EKS F++E++ C+++G+ NFHPG IS+E Sbjct: 61 ---NPVMVHAPYLLNLASPNEELREKSVKVFLEELKFCDEVGIHFYNFHPG-TAKGISDE 116 Query: 121 DCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L + +S+ + + T ++ENTAG+ +LG F+ L I++ ++GVC+ Sbjct: 117 EGLRNVIKSLEEVFSEYTPKFTTVLLENTAGERGDLGKNFKELKEIMNVFRG-IKLGVCL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFA GY++ T E + + VG + ++ +H ND+K G R DRH +G+G Sbjct: 176 DTCHAFAYGYEINTKEGFENFKREIEKMVGLESVKAVHANDSKVPLGGRKDRHEHIGKGY 235 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINP 265 IG + F+ +++D+ F +P +ET Sbjct: 236 IGLEGFKNLLKDEYFSTLPYYIETPKE 262 >UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX39_9BACT Length = 278 Score = 319 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 144/265 (54%), Gaps = 8/265 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H S G L NA AA + F +FTKNQRQW+ + F+ + + Sbjct: 2 LLGVHCSIKGSLHNAFNEAASLGIDTFQIFTKNQRQWKEKIVGPAEKTIFRETLRQSNIK 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + I H SYLINL + + ++ + E+QRC+ LG++ + HPG ++ Sbjct: 62 T--IFSHASYLINLATSDSRIYALTHNSLLGEIQRCDDLGIASIIIHPG-FTKNTGKQTG 118 Query: 123 LARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + + I L KT V ++ENTAGQGS++G+ F+ L +I+G+ R+GVC DT Sbjct: 119 MKNVIKMIKSVLKKTNNSPVKILMENTAGQGSSIGYHFKQLQQLIEGIGS-GRIGVCFDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYD+RT E T + TVG L +HLND+K GS++DRH +G+G IG Sbjct: 178 CHAFAAGYDIRTKIGFETTMEELDATVGLNSLYAIHLNDSKGALGSKIDRHEHIGQGAIG 237 Query: 241 HDAFRWIMQDDRFDGIPLILETINP 265 + FR IM IP ILET Sbjct: 238 LEPFRQIMN--TMKHIPKILETPKE 260 >UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVD3_ALIAD Length = 282 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 7/275 (2%) Query: 2 KYIGAHVSAAG-GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +GA+VS AG GL A A F ++T++ R +A P+ T DE A ++ Sbjct: 10 ILLGANVSVAGTGLLAAVEETISYGANTFMIYTRSNRGGKARPIETFHRDEGLALMREHG 69 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYL+NL P E + D +E++R E LG + HPGSH+ + E Sbjct: 70 IHDP--VVHLSYLVNLASPKPETRQYGMDVLREEIERVEYLGFRYIVMHPGSHVGE-GES 126 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + +IA+++N L + + +E AG GS +G E +A II V+ + R+ VCIDT Sbjct: 127 FAIRQIADALNEILTGDESLWLCLETMAGDGSKVGNSLEEIADIISRVKHEDRLAVCIDT 186 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH ++ GYD+ + + A+F R +G L+ +H+ND+K FGSR DRH ++GEG +G Sbjct: 187 CHNYSYGYDVVN--DFDGFLAEFDRVLGLDRLKVVHINDSKHPFGSRKDRHANVGEGTLG 244 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 +A + I+ GIP ILET + EEI L Sbjct: 245 LEALKRIVHHPALKGIPQILETP-EGKYKEEIDLL 278 >UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVE3_METI4 Length = 321 Score = 317 bits (812), Expect = 3e-85, Method: Composition-based stats. Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 6/282 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAHVS AGG ++AA RA A +F KN R+W + + I F + E+ + Sbjct: 43 LLGAHVSIAGGFSSAARRACACGFKAAQIFLKNCRRWEEPKIDEKDIVAFVSLKEENNI- 101 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS-HLMQISEED 121 H SYLINL E +KS +A + E+ E+L L + HPG+ L + Sbjct: 102 --FFFGHFSYLINLCSRSKEITQKSLNALVQEIIMAEKLTLPFVVLHPGTIALGKAEISQ 159 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + +N A++ T+ V +E AGQG LG+K E L II+ V+ R C+D Sbjct: 160 AIEVLCGYLNQAVELTKNTAVKIALETMAGQGGQLGWKLEQLREIIERVDSPERFCFCLD 219 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H + AGY+L+T +KT A +G + +HLND+ S FGS+VDRH +GEG + Sbjct: 220 TAHLWEAGYELKTAGGYQKTMEKIALELGLSRIAAIHLNDSFSPFGSKVDRHAHIGEGTL 279 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G + FR ++ D RF GIP++LET ++ L+ ++ Sbjct: 280 GVEPFRRLVNDSRFLGIPMVLETPKEKGLDDDCRNLRKILSD 321 >UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermaceae RepID=END4_PERMH Length = 285 Score = 312 bits (800), Expect = 8e-84, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 7/288 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVS++ L R EI A F + R W + + + F + Sbjct: 1 MVKIGAHVSSSKSLDLVFDRGREIGADTIQFFLSSPRSWHWKERSDEEKELFIQKRRETG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ H SYL NL +KS + I E++ CE+L + H G + E Sbjct: 61 ISP--VIAHSSYLFNLASSDPVLRKKSINGVIRELKLCEELKIDYYVIHAGKSKG-LKES 117 Query: 121 DCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + + I +S+ K + + E AGQ +G + LA +++ + K GVC+ Sbjct: 118 EAVKNIIDSVKEIFSKVKLKHTFFLYETLAGQKGEIGKTTDELAQLMEPFK-KENTGVCV 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH ++AGY + ++ ++ +G + ++ +H ND+K+ F S+ DRH +GEG+ Sbjct: 177 DTCHIYSAGYKINDEEGFYSYRSELSKKIGLENVKVIHCNDSKTPFNSKRDRHEHIGEGS 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWA-EEIAWLKAQQTEKAVA 285 IG+ F + + D+ F +P ILET W + + L+ VA Sbjct: 237 IGYKGFEFFLNDEYFRRLPFILETPKTADWDIKNMERLRRLIRTAPVA 284 >UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9W5_THEAS Length = 277 Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats. Identities = 98/279 (35%), Positives = 141/279 (50%), Gaps = 7/279 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS GG+ A R + A +FTKNQ QW ++P+ + F A Sbjct: 1 MALLGCHVSIEGGVWRAIERGDSLGCRAIQIFTKNQLQWMSSPIPLDVAERFYRAWRASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +++ H SYLINL ++S +A E QRC LG+ LL FHPG H + Sbjct: 61 I--VEVVSHASYLINLASHDPVLWKRSVEALTYEAQRCLDLGIGLLVFHPGHH-GGAGYQ 117 Query: 121 DCLARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + I L+ GV ++E +AGQG+++GF + + + R+G+C+D Sbjct: 118 VGMEWLERGIQQVLEAIPLGVRLLLEPSAGQGTSVGFVLKDCVELCHRIGY-ERLGLCLD 176 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYD RTP ++ G + + HLND+K GSR DRH +G G I Sbjct: 177 TCHLFAAGYDFRTPGGYDRLLRSLGDR-GTRLVGCWHLNDSKDPKGSRKDRHQRVGIGTI 235 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 G F+ I+ D RF +P I+E P AE++A L Sbjct: 236 GLAPFQMILSDPRFHAVPAIVEAP-PSTVAEDLALLNKL 273 >UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=END4_STAS1 Length = 296 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 16/293 (5%) Query: 3 YIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +G+HVS G L +A A + + F ++T + R P+ I++ + + Sbjct: 2 LLGSHVSMNGKKMLEGSAEEAHKFGESTFMIYTGAPQNTRRKPIEELNIEKGHEIMKAHG 61 Query: 61 YTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + I+ H Y+IN+ + E + E++R + LG + HPGSH+ + ++ Sbjct: 62 LS--NIVVHAPYIINIANTVKPHVFELGVEFLQSEIERTQALGAQDIVLHPGSHVGEGTD 119 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + +I E +N L V +E AG+GS +G FE LA IIDGV R+ VC D Sbjct: 120 -AGIKKIIEGLNEVLTNDNNVRIALETMAGKGSEVGRNFEELARIIDGVNHNDRLSVCFD 178 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY+++ + + +F + +G ++ +H+ND+K+ G+ DRH ++G G I Sbjct: 179 TCHTHDAGYNVK--EDFDGVLNEFDKIIGVDRIKVVHVNDSKNDIGAHKDRHENIGFGYI 236 Query: 240 GHDAFRWIMQDDRFDGIPLILETI--------NPDIWAEEIAWLKAQQTEKAV 284 G DA +++ D F IP ILET + EI LK Q+ ++ + Sbjct: 237 GFDALNYVVHHDTFKDIPKILETPYVGEDKKNKKPPYKLEIEMLKQQKFDEDL 289 >UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma gallisepticum RepID=END4_MYCGA Length = 303 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 15/291 (5%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 +KY+G V A + + AT+F ++ + +R P +D KA K Sbjct: 6 IKYLGCFVGATKPDFMLGMVKTVVDYGATSFMFYSGPPQSFRRTPTAQFKLDLAKAYLAK 65 Query: 59 YHYT--SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 ++ + H YLINL + + E+S + F+DE++R +LG HPGS L Sbjct: 66 HNLGDLGDNYVVHAPYLINLANGDSTKRERSFNFFLDELKRTNELGAKYFVLHPGSALNV 125 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + L +A +N A+ T+ +E A +G + KFE L +ID + DKSR+GV Sbjct: 126 KDKTQALDHLATELNRAISMTKDTIICLETMADKGQQICSKFEELRYVIDQISDKSRIGV 185 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C DTCH AGYDL A+ ++ F + +G KYL +HLND+K+ G+R DRH ++G Sbjct: 186 CFDTCHVHDAGYDL---AKTQELIDHFDQVIGLKYLYVIHLNDSKNPMGARKDRHANIGY 242 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPD--------IWAEEIAWLKAQQ 279 G IG + + +ILET D ++ EEI ++ ++ Sbjct: 243 GKIGFENLLNFIYHKEICNKIIILETPWIDDPIRGEVPLYKEEIEMIRNKK 293 >UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490E9 Length = 479 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 120/220 (54%), Positives = 152/220 (69%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S +GGL NA A I A +FALF ++QRQW+A PL F+ AC K+ Y IL Sbjct: 260 MSKSGGLWNAVSDAVSIGAKSFALFLRSQRQWQAKPLEDDNAARFQEACIKHGYPPHLIL 319 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 PH SYL+N G P L KSRD+ +DE+ RC++LGL+L NFHPGS I+ E+CL +I Sbjct: 320 PHGSYLLNCGSPNPATLSKSRDSLVDELSRCQKLGLTLYNFHPGSTCGDITIEECLDKIG 379 Query: 128 ESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 ESIN+AL KT GVTAVIEN + QG +G FE L IID V+DKSR+GVC+DTCHAFAAG Sbjct: 380 ESINMALAKTSGVTAVIENMSRQGHTIGGDFEELRGIIDRVKDKSRIGVCLDTCHAFAAG 439 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 YDL T + +K A+F R +GF+YL+G+HLND+K S Sbjct: 440 YDLSTESGYKKMMAEFERVIGFQYLKGVHLNDSKVPQKSS 479 >UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vulgaris RepID=END4_DESVH Length = 282 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 101/282 (35%), Positives = 140/282 (49%), Gaps = 6/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+SAAGG++NA EI LFT NQRQW + ++ F + Sbjct: 1 MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVEAFGRRRAAFG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYLIN+ + A K+ +A + E +RC LG+ + HPG+HL Sbjct: 61 ---GPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGVDAVVLHPGAHLG-AGRG 116 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + R A +I+ D+ G ++ENTAGQG+ LG LA IID S++GVC+ Sbjct: 117 TGILRAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIIDASRHASQLGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HAF AGY L T + D G +R H+ND+ GSR DRH +GEG Sbjct: 177 DTAHAFGAGYALHTDEGYRRCMEDIEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQ 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 +G AF ++ D F P++LET D A + L + Sbjct: 237 LGEAAFVRLLNDPVFAMHPMVLETPKEDGHAADRRNLATLRR 278 >UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=END4_SULSY Length = 279 Score = 310 bits (795), Expect = 3e-83, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 7/281 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS++ L R E++A++ F ++ R W T + + F +K Sbjct: 1 MVNIGTHVSSSKSLDLVFERGKEVEASSIQFFIRSPRSWAWIERTDEEKERFLQ--KKNE 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y ++ H SYL NL E +KS ++ I E++ CE+L + H G ++ Sbjct: 59 YKIHPLVVHASYLFNLASFEEELYKKSIESVIQELKLCEELKIDYYVIHAGKSKGNPKKQ 118 Query: 121 DCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + RI + + + T ++E AGQ +G E + +I+ E+ ++GVC+ Sbjct: 119 -AIDRILRAFEEIFSRLNLKNTTFLVETLAGQSGEVGATLEEVYTLIEPFEN-EKIGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FA+GY + T + + + +H ND+K+ F S+ DRH +G+G Sbjct: 177 DTCHIFASGYQINTDEGFNSFKKELIDYNLLEKTKVIHCNDSKAPFNSKKDRHEHIGKGF 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQ 278 IG + FR + DD F+ +P ILET D+ I LK+ Sbjct: 237 IGLEGFRIFLNDDDFNKLPFILETPKEGDMDRVNINLLKSL 277 >UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=END4_DESDG Length = 294 Score = 309 bits (792), Expect = 7e-83, Method: Composition-based stats. Identities = 107/280 (38%), Positives = 146/280 (52%), Gaps = 6/280 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAH+SAAGG+ A RA ATA +FT+NQRQW A PL + F AA ++ Sbjct: 14 LIGAHMSAAGGVHKAVERAEAAGATALQVFTRNQRQWNAPPLEEHDAELFTAAVRRWG-- 71 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H SYLIN E E+S DE+QR +LG+ ++ HPG+H Q Sbjct: 72 GYPVSSHASYLINPAADTPEGAERSVALMADELQRAGRLGIEMVVVHPGAHKGQGEAAGA 131 Query: 123 LARIAESINIALD-KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 A + V ++ENTAGQG+ LG F LAA+I+ R G+C+DT Sbjct: 132 ALAAARLDEALERCGSPAVMVLLENTAGQGTMLGASFAGLAAVIEASRMPERYGICLDTA 191 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAF AGYDLR A + + G LR +H ND+ + GSR DRH +G+G +G Sbjct: 192 HAFGAGYDLRDAALYDAAIRELDVCAGLDRLRLVHANDSLTGLGSRRDRHTHIGQGELGE 251 Query: 242 DAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWLKAQ 278 AFR +M+D+R +P +LET P+ +A L+ Sbjct: 252 AAFRLLMRDERLHHVPKVLETPKGKGPEEDMMNMAVLRRL 291 >UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0TX36_PHANO Length = 466 Score = 307 bits (786), Expect = 4e-82, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 155/290 (53%), Gaps = 46/290 (15%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVS AG LT + + F A C+++ + Sbjct: 125 VGAHVSTAG------------------------------ALTPEVANLFIAGCKEHGIDA 154 Query: 64 AQI-LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ LPH SYL+NL HP +++ D+F+++++RC LG+ L NFHPG + + E+ Sbjct: 155 AKCCLPHGSYLVNLAHPDPARKKQAFDSFLNDLERCNTLGIKLYNFHPG-NANATTREEG 213 Query: 123 LARIAESINIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + IA++IN A + V AV+E A G+ +G F LA II V+DK+RVGVC+DT Sbjct: 214 IRLIAQNINEAHQDKASGDVVAVLETMASLGNTIGGTFADLADIIKLVDDKARVGVCLDT 273 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYDLRTP T +F +G KYL+ +H+ND+K+ S D H ++G G +G Sbjct: 274 CHVFAAGYDLRTPEAYAATMKEFDDVIGLKYLKALHMNDSKAPLSSYRDLHANIGTGFLG 333 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD------------IWAEEIAWLKAQ 278 +F I+ D R G+P++LET IWA EI L++ Sbjct: 334 LSSFHNIVNDKRLHGLPMVLETPVDSVDENGKKTDDKGIWAREIKMLESL 383 >UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 RepID=C5G113_NANOT Length = 468 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 102/264 (38%), Positives = 153/264 (57%), Gaps = 23/264 (8%) Query: 37 RQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEM 95 R+W PL + D F+ AC +Y +A+ ILPH SYL+NL + + D+F+D++ Sbjct: 145 RKWDNPPLQEEHRDRFRRACIDNNYDAAKHILPHGSYLVNLAQEDPAKAKVAYDSFLDDL 204 Query: 96 QRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLG 155 +RCE LG+ L NFHPG+ + S E L+R+A+++ ALD T+ V V+E G G+ +G Sbjct: 205 RRCEALGIKLYNFHPGA-TNKTSLESSLSRLAKALISALDATETVIPVLETMCGHGTTIG 263 Query: 156 FKFEHLAAIIDGVED--KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLR 213 H + + + R+GVC+DTCH+FAAGYDLRTPA E+ +F TVG ++LR Sbjct: 264 GPLSHFRDLFALIPESYHPRLGVCVDTCHSFAAGYDLRTPAGWERFMTEFDETVGLRFLR 323 Query: 214 GMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI---------- 263 HLND+K+ GS+ D H ++G G +G AF +M D R +G+P++LET Sbjct: 324 AWHLNDSKTPLGSKRDLHANIGTGFLGLRAFHNLMNDKRVEGMPMVLETPIDRPVEGPGG 383 Query: 264 ---------NPDIWAEEIAWLKAQ 278 + +WA EI L++ Sbjct: 384 SAKGKKTVEDKSVWAAEIKLLESL 407 >UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCS6_THET1 Length = 296 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 6/278 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAHV GGL+ A RA EI A +F +QWR + + F A + ++ Sbjct: 11 PLIGAHVGIGGGLSKAIPRALEIGANCIQIFVSAPQQWREPAHPDEEVQLFIDAYNQSNF 70 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + I H YL+N P TE EKS + I + ++LG + H GS + E+ Sbjct: 71 RA--IFLHAIYLLNPAAPNTELREKSISSIISYLHWGKRLGAQGVVIHLGSSSG-TTREE 127 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + S+ ALD T V ++E +AG ++LG F+ LA I+ + D R +C+DT Sbjct: 128 AEKNLVNSVKTALDNTDEVPVLLETSAGTKNSLGSTFDDLARILYKIGDTKRAAICLDTA 187 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H +AAGYDL + +TF +F + +G L+ +H ND G DRH ++GEG IG Sbjct: 188 HIWAAGYDLSSEDAVNQTFEEFDQKIGLDKLKLIHANDTNVRIGGGRDRHENIGEGIIGE 247 Query: 242 DAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWLK 276 ++ ++ + P ILET + + AE+I L+ Sbjct: 248 RGWKALLTNPGIRFKPWILETPQIADKNSGAEQIKKLR 285 >UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METLZ Length = 281 Score = 304 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 5/269 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG L A RA E F +FT++ R W A P+ + F A Sbjct: 1 MIKLGFHVSIAGSLPLAVSRAQEAGCDTFQIFTRSPRVWAAKPIEPSIAEAFIDALNISG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL N E +S +E+ RC+QL + L H G H + + Sbjct: 61 IGP--VVDHMPYLPNPAAEKPEIYARSIFTMTEELDRCDQLKIPYLVTHLGHHGKEDGHK 118 Query: 121 DCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 ++ +I ALD+++G ++ENTA + + +G F + I D + ++ RVG C D Sbjct: 119 KGQEKVIAAIGQALDESEGETMILLENTANEKNTVGGTFTDIGVISDALSNERRVGFCFD 178 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 TCHA AAGYDL+ E F F G L+ +HLND K GS +DRH LG G Sbjct: 179 TCHAAAAGYDLKGH-GAETVFGWFNDEAGSLDRLKVIHLNDMKGGVGSHLDRHEHLGLGY 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI 267 +G + ++ + I+ET + +I Sbjct: 238 LGEETIHDVLTFPKISHCAFIMETPSDEI 266 >UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=END4_CARHZ Length = 283 Score = 302 bits (774), Expect = 9e-81, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 140/279 (50%), Gaps = 5/279 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H+S AGGL R + +F+++ R A P + + F E+Y Sbjct: 2 NVGLHLSIAGGLLKLKERIIKNKTEGVQIFSRSPRGGEAKPFNEKELKGFLEFKEEYKLY 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ++ H Y++NL P E +KS +++ R +QL L H GSH EE Sbjct: 62 P--LVVHVPYVMNLASPEEEMFQKSVAMIREDLYRSDQLHADFLVVHVGSHRG-AGEERG 118 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 LAR+ E + I L + +IENTAG G+ +G+ +HLA II + +G+C+DTCH Sbjct: 119 LARMVEGLKILLSENFKTRILIENTAGSGNEMGYSLDHLAYIISETGHEE-LGICLDTCH 177 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 AAGYD +P +F +G + +H+ND+K GSR DRH +L +G IG + Sbjct: 178 LLAAGYDDVSPEGISAFSREFREKIGEERFCLLHVNDSKHPIGSRKDRHENLEQGYIGRE 237 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 F ++ F +P ILET P I E++ LK + E Sbjct: 238 GFINLLNSPFFKRVPWILETPEPGI-EEDLVKLKKLREE 275 >UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS22_ACIBL Length = 328 Score = 302 bits (774), Expect = 9e-81, Method: Composition-based stats. Identities = 100/282 (35%), Positives = 141/282 (50%), Gaps = 9/282 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG H S+AGG+ AA RA + + +F+ + RQW+ L + + KY Sbjct: 29 VRIGIHTSSAGGVELAAERAYRLGCSCLQIFSSSPRQWKPFELGRSQCETMSSIRAKYDL 88 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H +YLIN+ E +KS +AF E+QR L L HPGS + ED Sbjct: 89 NP--LVIHANYLINVAGGNPEFHQKSIEAFRAEVQRGIDLCADYLVLHPGSFKG-ATRED 145 Query: 122 CLARIAESINIALD----KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 L R AE+I A+D + + IENTAG +LG FE +A ++ + V C Sbjct: 146 GLQRAAEAIEAAVDGLGIEKTNLKITIENTAGSEFSLGGSFEQVAELMARLRKHVPVAAC 205 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDTCH AGYD+ T EKT TVG K + H NDAK+ GS++DRH +G+G Sbjct: 206 IDTCHTHVAGYDITTKKGFEKTLQQLDDTVGLKNVGVFHCNDAKAPRGSKLDRHQHIGQG 265 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIWA--EEIAWLKA 277 IG + F+W++ D R I ET + + I LK+ Sbjct: 266 TIGLEPFKWLLNDPRLQHPAFIAETPIDEPLDDLKNIDALKS 307 >UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium thermophilum RepID=END4_SYMTH Length = 276 Score = 301 bits (772), Expect = 1e-80, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 137/280 (48%), Gaps = 11/280 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H+S + G A A + AF FTKN R ++ + +A +Y Sbjct: 2 KLGCHISISKGFPQAVENAHRLGCEAFQFFTKNPRGFKGKSADPEAAARGRALMAEYGLV 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + + H Y+ NL P E S + +++ E G H G H+ + E Sbjct: 62 A---VAHAPYITNLSTPDPELQAISIASLKQDLENAEAYGAIGCVCHMGKHVGE-GEAYG 117 Query: 123 LARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 AR+ E++N L+ G ++ENTAG GS LG E L + VE R+ C DTC Sbjct: 118 RARMVETLNRLLEAYTGSCPLLLENTAGMGSELGTHLEELMEVRSRVEQPERIAFCFDTC 177 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFK-YLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 HAFAAG + P + E A AR +G+ LR +HLND+K GSR DRH +LG+G +G Sbjct: 178 HAFAAG--IYRPEDWEDFVAH-ARAIGYWGLLRAVHLNDSKFDHGSRKDRHANLGKGFLG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQ 278 +++ F+G+P++LET D + EIA+ ++ Sbjct: 235 EAGIATLLRSGAFEGLPVVLETPVKDEAEYGPEIAYARSL 274 >UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae RepID=END4_HALWD Length = 278 Score = 300 bits (768), Expect = 4e-80, Method: Composition-based stats. Identities = 92/263 (34%), Positives = 132/263 (50%), Gaps = 6/263 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH S AGG+ANA R E +FT + + W+ + + F+ + + Sbjct: 2 LVGAHESIAGGVANAVDRQLENGGNCGQIFTHSPQVWQDPSIDDTDAEAFRDRSQMHDIG 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 I H SYL+NL P + KS D+ E+ QL + +N H G+H ++ Sbjct: 62 PWVI--HSSYLVNLCTPKDDLRAKSIDSMQQEVDAAAQLSIPYVNVHLGAHTG-AGKQQG 118 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L +++ L VT ++E+ AG G+ LG KF+HLA +++ E + VC+DT H Sbjct: 119 LDNAISALDE-LTIPDSVTVLLESDAGSGTKLGNKFDHLAYVLE--ESTHELEVCLDTAH 175 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYDL TPA T +F TVG L +HLND+K G+ D H +GEG IG Sbjct: 176 VFAAGYDLSTPAAVNTTIKEFDTTVGVDNLACVHLNDSKHACGTNKDEHAHIGEGKIGES 235 Query: 243 AFRWIMQDDRFDGIPLILETINP 265 + D IPL+LET N Sbjct: 236 GMEAFINHSAIDPIPLVLETPNE 258 >UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiroplasma citri RepID=Q14M87_SPICI Length = 308 Score = 299 bits (766), Expect = 7e-80, Method: Composition-based stats. Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 14/287 (4%) Query: 4 IGAHVSAAG---GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 IG+HVS L A + +A A ++T + I EF +K+H Sbjct: 8 IGSHVSMNKQQNYLLGALNESLNNNANAMMIYTGPPQNTIRVSTEQFFIPEFYQQLKKHH 67 Query: 61 YTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + I+ H Y+INL + E + + +E+ R +++G+ + HPGS + E Sbjct: 68 FDINNIIIHAPYIINLANTTNPSTFEIAVEFLKNEITRADEIGIKTIVLHPGSGVGAP-E 126 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + L +I E +N+ L Q +E AG+GS LG F L IID V+ ++GVC D Sbjct: 127 QVGLDQIIEGLNLVLTPNQKAKIALETMAGKGSELGTSFAQLKYIIDNVKLNDKLGVCWD 186 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY L + +F + +G L +H+ND+K+ + DRH ++G G + Sbjct: 187 TCHMHDAGYRLT--EALDDIIIEFEQLIGLNRLLCLHINDSKNPLNAHKDRHENIGYGYL 244 Query: 240 GHDAFRWIMQDDRFDGIPLILETI-------NPDIWAEEIAWLKAQQ 279 G + I+ + DG+ ILET + +EIA +KA+ Sbjct: 245 GFETLLKIIYHPKLDGMIKILETPYVGEKKHAVAPYKDEIAMIKAKN 291 >UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9M8_GEMAT Length = 293 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 111/284 (39%), Positives = 155/284 (54%), Gaps = 10/284 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S AGG AA RA E+ ATA +FTK +W + F+ A Sbjct: 14 LGAHMSVAGGSWEAAPRAREVSATAMQIFTKQANRWAEREVDAVEATRFREALSATSVRW 73 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 HDSYLINL P+ E E+S +F E++RC LGL L HPG+ + + Sbjct: 74 --CCAHDSYLINLASPMPELRERSVLSFRAELRRCHALGLDALVSHPGNFID--DRPSGI 129 Query: 124 ARIAESINIALDKTQGVT-AVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDT 180 AR A+ I AL+ G T ++E TAGQG+ LG FE +A ++ + + R+GVC+DT Sbjct: 130 ARNADGIIEALEAEPGPTRLLMELTAGQGTVLGSTFEEMADLLSRIPSALRGRMGVCLDT 189 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H +AAGYDL + + +A T+GF L +HLND+K+ S +DRH +GEG+IG Sbjct: 190 AHVWAAGYDLIN--AYDDMWTRYADTLGFASLGCLHLNDSKARLASHLDRHDLIGEGSIG 247 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAE-EIAWLKAQQTEKA 283 D FR IM D+R +P +LET D AE + L ++ A Sbjct: 248 ADVFRRIMTDERLTHVPKVLETPKGDSPAETDARMLHRLRSYAA 291 >UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum rubarum RepID=A3ERM7_9BACT Length = 317 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 5/272 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++G HVS GGLA + R + + +F+ + R W LT ++ F + +K Sbjct: 15 LFLGTHVSIRGGLALSIERGETLGCGSIQIFSHSSRTWAVPALTEAEVNAFVSRHQKSSV 74 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 75 GP--VLMHASYLVNTATSDPEKRKKSAAALEEDWILANRLGVYGLVLHPGSAAGQ-SDAA 131 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + AE I +D+ +G ++ENTAG G LG + ++D V+ +VG+C+D Sbjct: 132 AIRLSAEMIRDTVDREKGGSTLLLLENTAGGGRTLGRDPGTMKQLVDRVDRPEKVGLCLD 191 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 +CH A+G ++R P E+ + + G +R HLNDA GS DRH +G+G+I Sbjct: 192 SCHLLASGAEIRNPRSYEEVLSAWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSI 251 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 G F +++D RF GIP++LET D E+ Sbjct: 252 GLWFFWTLLRDHRFTGIPMVLETPKTDDIRED 283 >UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium RepID=END4_BIFLI Length = 284 Score = 297 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 11/283 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIG+H+S AGG R+ E TAFA F ++ R+ L F A + Y Sbjct: 4 LYIGSHLSTAGGWNALLERSHEEGGTAFAFFPRSPYGKRSKALDPADAATFGARLKAEDY 63 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQL---GLS-LLNFHPGSHLMQI 117 ++ H Y+ NL + +A ++++ + G +N HPG+H+ Q Sbjct: 64 GP--LVVHAPYVYNLAGKDEAKRAFAIEALAEDIELLTAIREAGQEVYINIHPGAHVGQG 121 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ++ C I+E +N ++T GV ++E AG+G+ G FE LA I++GV++K+ VGV Sbjct: 122 TKTGC-QLISEGLNQVFERTTGVMVLLETMAGKGTECGRNFEELATIMNGVKNKANVGVT 180 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH AGYDL + + +G ++ +H+ND++ S DRH ++G+G Sbjct: 181 FDTCHVLDAGYDLVN--DYDGVMRQLDEAIGLAKVKAIHVNDSQFGLDSHKDRHANIGQG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 +G F ++ D +P+ILET P +EI L+ Sbjct: 239 QLGIPFFTRLVNDPIMAKLPMILETKEQTPATHRDEIELLRGL 281 >UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH Length = 528 Score = 297 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 148/282 (52%), Gaps = 42/282 (14%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 ++GAH+SAA G+ NA + I Sbjct: 153 FVGAHISAAKGVQNAVTNSLYIG------------------------------------- 175 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +LPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ + S E Sbjct: 176 --HVLPHGSYLVNLAQEDPTKAKQAYDSFLDDLKRCEELGIKLYNFHPGA-TNKASLESS 232 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDT 180 L+R+A+++ AL T V V+E G G+ +G H +++ + + +SR+G+C+DT Sbjct: 233 LSRLAQALVSALKATTTVVPVLETMCGHGTTIGGPLSHFKSLLALIPNTYRSRIGICVDT 292 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH+FAAGYDLR+P+ +F +G +YLR HLND+K+ GSR D H ++G G +G Sbjct: 293 CHSFAAGYDLRSPSSWNSFMEEFDNEIGLQYLRAFHLNDSKTPLGSRRDLHANIGTGFLG 352 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 AF +M D R +GIP+ILET E + ++ Sbjct: 353 LRAFHNLMNDKRLEGIPMILETPIDRPAKSEAEMATGKLDDE 394 >UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX RepID=Q47NI0_THEFY Length = 293 Score = 297 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 92/285 (32%), Positives = 130/285 (45%), Gaps = 11/285 (3%) Query: 3 YIGAHVSAAGGLAN-AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAHV +GGLA A I A +F N R W P + +A Sbjct: 8 RIGAHVPVSGGLAKRGLSYADAIGAEVIQVFVTNPRSWAHTPGNAEQDALLRAR------ 61 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 T + H YLINLG P E +S + +QR Q+G + H GS + + Sbjct: 62 TDLPVFVHACYLINLGSPDEEIAARSVASLKYTLQRAAQIGARGVVVHTGSAV-RGGRAA 120 Query: 122 CLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LAR+ + L+ ++E AGQG L + LA +D V+ + GVC+D Sbjct: 121 GLARVRARLLPILEALDEAAPPVLLEPMAGQGQVLCATVDDLADYLDAVDRHPKAGVCLD 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H F AG+D+ T A F VG LR +H ND+ + GSR DRH +G G I Sbjct: 181 TAHVFGAGHDVSTRAGMRTMLDRFGEVVGADRLRLVHANDSAAPCGSRRDRHAGIGLGYI 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPD-IWAEEIAWLKAQQTEKA 283 G D F + G+P+++ET P+ A ++A LK + + A Sbjct: 241 GADPFAEVFTHPVSAGVPVVVETPGPEGPHARDVATLKELRAQAA 285 >UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penetrans RepID=END4_MYCPE Length = 289 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 11/288 (3%) Query: 2 KYIGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 +G+HV A L + + E D F +FT + + L IDE ++ Sbjct: 6 LLLGSHVGFKAKNYLVGSVLETLEYDGNCFMVFTGPPQNFMRKELDQNLIDEAVKLMKEK 65 Query: 60 H-YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + I+ H YLINLG P + I E+ R Q+ L+ HPGS L Sbjct: 66 NPLLLENIVVHAPYLINLGSPKESTRSLGLNQLIVEINRTNQIHSKLIVLHPGSAL-DSD 124 Query: 119 EEDCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + IA+++N A++ T V +E AG+GS +G FE ++ I+ GV++K R+GVC Sbjct: 125 RNVAINHIADNLNKAIEATDNDVIICVETMAGKGSEVGINFEEVSKIVSGVKNKKRIGVC 184 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH +G D+ P ++T +F++ + Y++ +HLND+K+ GSR DRH ++G G Sbjct: 185 LDTCHMHDSGIDISDP---DQTLEEFSKYLDLSYIKVIHLNDSKNEIGSRKDRHDNIGYG 241 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWLKAQQTEK 282 +G D +++ +P ILET D I+ +EI L +++ ++ Sbjct: 242 KVGFDYLVKWAHNEKLANVPKILETPYRDDKPIYKQEIINLNSKEWKE 289 >UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID=END4_MYCCT Length = 289 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 11/281 (3%) Query: 2 KYIGAHVSAAG---GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 +G HVS L + A A F +FT + I++ Sbjct: 4 VLLGCHVSMNKQNNYLVGSVNEAISYKANTFMIFTGPPQSTLRTNTNHLYINQMHELMNS 63 Query: 59 YHYTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 Y + ++ H Y+IN+ + E + + I E++RCE++ + L HPGS+ Sbjct: 64 YKIDAKDLVVHAPYIINIANSVDQNKWEFAVNFLIQEIKRCEEIKIPTLVLHPGSYTTG- 122 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + +D L +I +++++ + V +E +G+G+ + K E I+D V++K +VGVC Sbjct: 123 NYKDSLNQIIKALDMVSNYQVNVKIALETMSGKGTEVCSKLEDFKYILDNVKNKDKVGVC 182 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH AGYDL E ++ + + +HLND+K+ S DRH ++G G Sbjct: 183 LDTCHLHDAGYDLSKWTEFKE---QIKQNFNLDKVLCIHLNDSKNMISSHKDRHANIGYG 239 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWL 275 +G D ++ D F I ILET D + EI L Sbjct: 240 FVGFDTLVNVVFDKDFSNISKILETPYIDKKAPYKIEIEDL 280 >UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID=END4_MYCGE Length = 291 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 15/292 (5%) Query: 2 KYIGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 K +G+ +S A +A A IDATA +F P + Sbjct: 3 KLLGSFISFKAPNYFVQSAQDAIAIDATALMVFLGPPHSAYRVPFNKMQFSLGYELLKTK 62 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + S ++ H Y+IN + + +E+Q C G L HPGS + Q + Sbjct: 63 NINSNGLVVHAPYIINCASKDPLKQQNAISVLTNEIQLCNLAGAHYLVLHPGSAVAQTTN 122 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E L + + +N ++KT+ +E AG+G+ +G L +ID + DK R+GVC+D Sbjct: 123 E-ALDNLVKVLNQVINKTKTTVICLETMAGKGNEIGRDLTELKYVIDRIVDKDRIGVCLD 181 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH +G D + F +GF++L+ +HLN++K+ GS+ DRH ++ G I Sbjct: 182 TCHFHDSGIDFS---DLTGVFNTITTKLGFEFLKVIHLNESKNNCGSKKDRHANINAGMI 238 Query: 240 GHDAFRWIMQDDRFDGIPLILETIN-----PDIWAEEI----AWLKAQQTEK 282 G + + + +P+ILET + P I+ EEI +W K Q + Sbjct: 239 GFENLMKFISHPQIKDLPIILETPSTSLNYPTIYREEISQIRSWFKTYQPDA 290 >UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma RepID=END4_THEAC Length = 281 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 105/279 (37%), Positives = 152/279 (54%), Gaps = 13/279 (4%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H+S AGGL N RAA F F+KNQ +W + PL FK+ KY S Sbjct: 15 IGGHISVAGGLHNGPARAAVFGFPTFQFFSKNQMRWSSPPLKDDEAAAFKSEVRKYGIES 74 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H SYLINL + ++S +AF DE+ R ++LG + L HPGS+ D + Sbjct: 75 TMI--HASYLINLASADPDLYKRSMEAFHDEIDRSDKLGSTFLTVHPGSN---PDRADGI 129 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 R+ ++++ D V +IENTAGQG+ +G + + +A IID + ++GVCIDTCHA Sbjct: 130 RRVRDALSTIGDHA--VIILIENTAGQGNVIGTRLDEVAKIIDTSD--KKLGVCIDTCHA 185 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +A+GYDLR EK T+G + HLNDAK GSR+DRH +G+G I Sbjct: 186 WASGYDLR--DSLEKFIESLDYTIGLDRIFAFHLNDAKREMGSRIDRHELIGKGTI-DGG 242 Query: 244 FRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTE 281 +++DDR P I+ET + + + ++ ++ E Sbjct: 243 LINLIRDDRLRAKPKIMETPFGEARFEDNLRYMSSKIGE 281 >UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U7_9ZZZZ Length = 285 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 8/287 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAHVSAAGG+ A R EI A A +F + +QW PL + FK ++ Sbjct: 2 RLGAHVSAAGGIDLAIDRGVEIGAEAVQIFASSNQQWAFKPLDEKQTASFKTKALEHSIG 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YL+ LG E L + + ++ M LG+ + FH GSH E Sbjct: 62 PN--VLHGIYLVTLGTEEPELLRRGVQSLVNYMNAAHDLGMLGVVFHLGSHKG-AGFEAV 118 Query: 123 LARIAESINIALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 ++ ES+N LD + T +I EN+AG G+++G KF L ++ V RV VC+DT Sbjct: 119 FRQVVESMNRVLDNSPDDTLLIMENSAGMGNHIGSKFHELGTLLKEVGSP-RVKVCLDTQ 177 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H+FAAGYDL TP T F +G ++L +H ND+K G+ VDRH ++GEG +G Sbjct: 178 HSFAAGYDLTTPEAVAGTLRQFDGEIGLEHLAAIHCNDSKRDLGAGVDRHENIGEGYMGL 237 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIW---AEEIAWLKAQQTEKAVA 285 +AF I+ +P LE + + +K+ + ++A++ Sbjct: 238 EAFEAILAAPALRDVPFYLEVPGFEGHGPDRRNMDIIKSIREKQAIS 284 >UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQQ7_9BACT Length = 318 Score = 294 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 5/272 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++G HVS GGL + R + + +F+ + R W + + F + +K Sbjct: 16 LFLGTHVSIRGGLVLSLERGETLGCGSIQIFSHSSRTWDLPSIPDGEVHAFVSRHKKSSV 75 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 76 GP--VLMHASYLVNTATSDPEKRKKSARALKEDWVLANRLGVYGLVLHPGSAAGQ-SDAA 132 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + A+ I +D +G ++ENTAG G LG + +++ ++ +VG+C+D Sbjct: 133 AIRLSAKMIRDTVDMEKGGSTRLLLENTAGGGRTLGRDPGTMKQLVERIDRPEKVGLCLD 192 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 +CH A+G +LR P CE+ + G +R HLNDA GS DRH +G+G+I Sbjct: 193 SCHLLASGAELRNPRSCEEVLLSWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSI 252 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 G F +++D R+ GIP +LET D E+ Sbjct: 253 GLWFFWNLLRDRRYTGIPKVLETPKTDDVRED 284 >UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID=END4_CLOPH Length = 300 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 18/290 (6%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M IG+HV +G +A A DA F ++T + R ++ ++E ++ Sbjct: 1 MLKIGSHVGMSGKEAFFGSAKEAHSYDANTFMVYTGAPQNTRRKDISDLRLEEGFEFMKQ 60 Query: 59 YHYTSAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 + + I+ H Y+INLG+ V + + D EM+R + L HPG+H+ Sbjct: 61 HGIS--DIVIHAPYIINLGNSVNLDTYSLAVDFLAKEMERTKAFRSKYLVLHPGAHVG-A 117 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + + +I + +N L + + +E AG+GS +G FE LA I DGV+ R+ VC Sbjct: 118 GVDAGIKQIVQGLNEVLTRDTDLYIALETMAGKGSEIGRNFEELARIYDGVKYNDRLRVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH AGYD+ + + F + +G + + H+ND+K+ G+ DRH ++G G Sbjct: 178 FDTCHTNDAGYDVVN--DFDGVIEQFDKLIGKEQIAVFHINDSKNDRGASKDRHENIGFG 235 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI----------NPDIWAEEIAWLKA 277 +G DA +I+ F +P ILET + + EI L+ Sbjct: 236 TLGFDAISYIVHHSDFIEVPKILETPYVSLPNEKEKSLPPYRYEIEMLRN 285 >UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FH43_SORC5 Length = 323 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 120/293 (40%), Positives = 166/293 (56%), Gaps = 12/293 (4%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M + GAH S AGGL A A E +FTK QWR L+ + I F+AA + Sbjct: 4 MIF-GAHESVAGGLHRAIALAGEDRCEVVQIFTKVSGQWREPALSAEQIAAFRAARAAWA 62 Query: 61 YTSAQ---ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 A L H SYLINL LE+SR+A E+ RC+ LG+ + FHPG+H + Sbjct: 63 GAGAGVGRTLAHASYLINLCADDAAILERSREALFQELARCDALGIDFVVFHPGAH-RSL 121 Query: 118 SEEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNLGFKFEHLAAIIDGV-EDKSRV 174 EE L RI ES++I L + +G+ IENTAGQGS LG + + +AA+I+ + SR+ Sbjct: 122 GEEAGLDRIGESLSIVLSRGKGLRARLCIENTAGQGSTLGDRVDQIAAMIERAGPEGSRL 181 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 GVCIDT HAFAAG+DLR+ A E+ ++DF R +G L+ MH+ND+K+ G RVDRH + Sbjct: 182 GVCIDTQHAFAAGHDLRSEAGYERFWSDFGRLLGLHRLQCMHVNDSKAALGQRVDRHERV 241 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEKA 283 G+G +G F + D R +P ++E + EEIA L+A + Sbjct: 242 GDGEMGLAPFWRLANDARLARVPAVIELPPLSKERRGYLEEIARLRALEGAAE 294 >UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID=END4_MOOTA Length = 279 Score = 292 bits (749), Expect = 7e-78, Method: Composition-based stats. Identities = 94/282 (33%), Positives = 141/282 (50%), Gaps = 9/282 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH+S A GL A A I A F FT+N R A + + I ++ A + Sbjct: 2 RLGAHLSIAKGLPRTAAMATSIGANTFQYFTRNPRGGAARQIPGKEIQAWREARRRADLY 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 I H Y +NLG E +R D+ R + L HPG + + + Sbjct: 62 P--IAGHLPYTVNLGAAAERQQEFTRMVLHDDTLRVAAIDGEYLISHPGHYEGE--RQAG 117 Query: 123 LARIAESINIA-LDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L RI + I A L T G ++E AGQG +G + L I++G+ RVGVC+D+ Sbjct: 118 LDRIIQLIEEAYLSITPPGPMLLLETMAGQGKEVG-TIDDLCYILEGLGWPDRVGVCLDS 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H FAAG+DLRTPA C++ + A +G ++ MHLND+ + GS DRH +G+G +G Sbjct: 177 AHLFAAGWDLRTPAGCQQLVQELAAKIGLDRVKAMHLNDSAAPLGSHRDRHAGIGKGELG 236 Query: 241 HDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQT 280 + ++ D +PL LET N + + EEIA ++ ++ Sbjct: 237 REGIAAVVNDPFLGELPLFLETPVANYEEYGEEIALIQKLKS 278 >UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepID=END4_UREU1 Length = 304 Score = 292 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 12/286 (4%) Query: 4 IGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS A + A A ++T + R P+ I+E ++++ Sbjct: 8 IGSHVSLKANDFFYGSVKEALSYGANTLMVYTGAPQNTRRQPIELFKINEAHNLLKEHNI 67 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H Y+IN E +++ I E++R + +G++ + HPGS L Q E+ Sbjct: 68 DLNNLIVHAPYIINPCSSKKYVRELAKEFLIQEIERTQFMGITKIVLHPGSCLDQ-DEDI 126 Query: 122 CLARIAESINIALDK-TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L ++ +N V +E +G+GS +G + L IID V+ K +GVC+DT Sbjct: 127 ALKQVYTMLNEIFATINTNVVVCLETMSGKGSEIGINLKQLKTIIDNVDSKKNIGVCLDT 186 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH +G L + +F +G Y++ +H+ND+K+ G+ DRH +LG G IG Sbjct: 187 CHMSDSGIAL-DHDSFNQYLKEFDAQIGIDYIKVLHINDSKNPRGANKDRHENLGYGTIG 245 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD-------IWAEEIAWLKAQQ 279 D I+ + IP ILET D ++ EI ++ ++ Sbjct: 246 FDNLINIIYHPLLNNIPKILETPWFDFHDQSISLYEYEIKMIRDRK 291 >UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47D Length = 283 Score = 292 bits (748), Expect = 9e-78, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 153/278 (55%), Gaps = 12/278 (4%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVS AG + + RAA F +F K+ QW+ P+T + ++ F+ +K+H Sbjct: 13 KLVGGHVSIAGSIGLSPERAAAFGFNTFQIFVKSNLQWKYKPVTEEEVENFRDGVKKFHM 72 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 A+ + H +YL+NLG E +EKS D E++ C ++G+ L HPGS+ + E Sbjct: 73 --AKPVVHATYLLNLGSENRELVEKSMDDIKYEIEVCNRIGVDRLVLHPGSN---SNREI 127 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L I E +N +T VT +IEN++G+G+ + E + ++D K+++G+C+DTC Sbjct: 128 ALNSIMELLNSL--ETGNVTMLIENSSGKGNTVPATSEEMGKMLDL--SKNKIGICLDTC 183 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA GYDL+ +++ ++ +H+ND+ GS+ DRH ++G G IG Sbjct: 184 HFFAGGYDLKN--GYKESIDSLRSNGITGHIGALHINDSMFDIGSKKDRHENIGNGYIGD 241 Query: 242 DAFRWIMQDDRFDGIPLILETINPDI-WAEEIAWLKAQ 278 F I+ D F+ IP+I+ET D ++ + LK+ Sbjct: 242 AGFSNIINDRTFNNIPMIMETPGGDEHYSGNMEKLKSL 279 >UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales RepID=END4_STRAW Length = 310 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 8/281 (2%) Query: 4 IGAHVSAAGGLANA-AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HV AGGL + A ++ A A +F N R W + +EF+AAC Sbjct: 31 VGGHVPVAGGLHSVGLAYARDLAAEAVQVFVANPRGWATPAGNPRQDEEFRAACAAESIP 90 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YLIN G +EKS ++ ++R ++G + H GS Sbjct: 91 A---YVHAPYLINFGSHTEATVEKSVESLRHSLRRGREIGALGVVVHTGSATGGRERSVA 147 Query: 123 LARIAESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LA++ E + LD+ ++E+TAGQG++L + + ++ ++GVC+D Sbjct: 148 LAQVREHLLPLLDELTHDDDPYLLLESTAGQGASLCSRTWDFGPYFEALDAHPKLGVCLD 207 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAG+DL P+ +T TVG L+ +H ND+K G+ DRH ++G G+I Sbjct: 208 TCHIFAAGHDLTGPSGMHQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGSGHI 267 Query: 240 GHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQ 279 G D FR +M +G+PLI+ET + A ++ LK + Sbjct: 268 GEDPFRALMTHPATEGVPLIIETPGGKEGHAADVEQLKKLR 308 >UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=END4_SOLUE Length = 290 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 139/286 (48%), Gaps = 9/286 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H +G L AA+ A ++ A F +F+ + R WRA I AA E++ + Sbjct: 2 RLGIHTFTSGSLETAALTAGDLGAATFQIFSASPRMWRARVPDPVQIKLLCAARERFSLS 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ++ H +YL+NL KS DAF E+QR +G L HPGS+ + E+ Sbjct: 62 P--LVIHTNYLVNLASLDPVIRAKSIDAFRGELQRAIAIGAEYLVVHPGSYRGH-TVEEG 118 Query: 123 LARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS--RVGVCI 178 +A A + A +T ++ENTAG G +LG KFE L +I D + + +G C+ Sbjct: 119 IAAFALGLRDASAGLPPHQLTVLLENTAGAGCHLGGKFEELRSIRDLTAELTDLPIGYCL 178 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH AAG+D+ T T +G + H ND++ GS VDRH +GEG Sbjct: 179 DTCHLLAAGFDIVTAPGLRATLRAAEAVLGLANVHVFHANDSRFPRGSHVDRHAHIGEGF 238 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTEK 282 IG DAFR I+ + P ILET P + LK+ K Sbjct: 239 IGADAFRRILTHPKLRRKPFILETPVDEPGDDRRNLDILKSLAGSK 284 >UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ellin514 RepID=B9XFU8_9BACT Length = 268 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 102/262 (38%), Positives = 132/262 (50%), Gaps = 5/262 (1%) Query: 16 NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN 75 A RA I +F KN QW P + + A I H YLIN Sbjct: 1 MALKRAVSITGEICQIFVKNNMQWFGKPYMPDDLRLYANEVAANKL--ASIFGHTGYLIN 58 Query: 76 LGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALD 135 LG +E EKS + + E+ LGL L HPG+HL EE + +IA ++ A Sbjct: 59 LGAQASENREKSIKSLVQEINMATDLGLPFLVMHPGAHLG-TGEEAAIKQIAAGLDEAFQ 117 Query: 136 KTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTP 193 T+ V +ENTAGQG+ LG + HLA I V R+GVC+DT H F AGYDLRTP Sbjct: 118 ATKHSPVRIALENTAGQGTCLGHEIRHLAEIFQKVNRPERLGVCLDTAHFFEAGYDLRTP 177 Query: 194 AECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRF 253 + +G K + HLND+K+ GSRVDRH +GEG IG +AFR I+ D+RF Sbjct: 178 KGWNAAIGEVENFIGVKQVLAFHLNDSKTDLGSRVDRHAGIGEGKIGREAFRHIVNDERF 237 Query: 254 DGIPLILETINPDIWAEEIAWL 275 +P LET E++ L Sbjct: 238 RDLPGCLETPKSADMHEDVENL 259 >UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae RepID=B7A694_THEAQ Length = 276 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 152/286 (53%), Gaps = 18/286 (6%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR PL ++ F+A E Sbjct: 1 MVRYGFHLSIAGKKGVAGALEEAMALGLTAFQIFAKSPRSWRTRPLAANEVEAFRALKEM 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 A I H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 AGGMPAVI--HASYLVNLGAE-GELWEKSVMSLADDLEKAAILGVEYVVVHPGSGDPKRV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L +++ +A + + T ++ENTAG G +G +FE LA +++ + + C+ Sbjct: 118 KEGAL----KALRLAGVRGK-PTLLLENTAGGGEKVGSRFEELAWLLE----DTPLQACL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGYD++ + + + VG + + +HLND+ FGSR+D+H L +G Sbjct: 169 DTCHAFAAGYDVK--EDPKGVLTALDKAVGLERVPVVHLNDSVGGFGSRIDQHAHLLQGQ 226 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEKA 283 IG + + ++ D R G +LET +P+ A + L+ E A Sbjct: 227 IG-EGLKGVLLDPRLRGRVFVLETPRSPEEDAWNLKVLRGWLEEAA 271 >UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FAW5_VIBCH Length = 200 Score = 289 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 140/199 (70%), Positives = 161/199 (80%) Query: 85 EKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVI 144 +KSR AF+DEM RC+QLGL+LLNFHPGSHL Q+SEE CLA IAESIN+A + V AVI Sbjct: 1 DKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVSEEACLATIAESINLAHRQVPNVIAVI 60 Query: 145 ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFA 204 ENTAGQGSNLG++FEHLAAIID VEDK RVGVC+DTCH FAAGYDLRT A C++TFA+F Sbjct: 61 ENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTCHTFAAGYDLRTKAACDETFAEFE 120 Query: 205 RTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETIN 264 R VG YLR MH+ND+K SRVDRHHSLG G IG + F +I QD RF+GIPLILETI+ Sbjct: 121 RVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGWECFEYIAQDARFNGIPLILETID 180 Query: 265 PDIWAEEIAWLKAQQTEKA 283 PDIWA EIA L+ T+K Sbjct: 181 PDIWATEIATLRKFSTQKE 199 >UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriaceae RepID=D2RYB0_9EURY Length = 289 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 136/292 (46%), Gaps = 21/292 (7%) Query: 3 YIGAHVSAAGG-------------LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTI 49 +GAHVS +G L NA R +FT + + W ++ + Sbjct: 2 KVGAHVSISGSRVSSDDETPPYDDLRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISDEAA 61 Query: 50 DEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH 109 D F+ E + H +YL+NL P + KS+++ E+ QLG+ +N H Sbjct: 62 DGFRE--ESDERLEGPWVIHSAYLVNLCTPKDDLRRKSKESMQAELDAAAQLGIPYVNVH 119 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 G+H E L A I+ L+ + V +IE+ AG G+ LG +F HLA IID E Sbjct: 120 LGAHTG-AGVEGGLDNAASLIDE-LEVPEDVQILIESDAGSGTKLGGEFSHLAGIIDRTE 177 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD 229 +G+CIDT H AG DL TP ++T F VG +YL +HLND+K G+ D Sbjct: 178 TD--IGICIDTAHTLVAGNDLTTPEAVDETVGRFDDEVGLEYLEYIHLNDSKHDVGTHKD 235 Query: 230 RHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQQ 279 H +GEG IG D + I+ +P LET D +A I +K + Sbjct: 236 EHALIGEGYIGEDGMKAIVNHPDLRDLPFALETPTEDGKGFAWNIEKVKELR 287 >UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3188E Length = 289 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 98/275 (35%), Positives = 139/275 (50%), Gaps = 7/275 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHVS AGGL NA R E TA +F ++ R WR + F+ A Sbjct: 2 LIGAHVSQAGGLPNAIERGVEKGCTAIQIFNQSPRMWRPTQYSEDDFAAFRDAMAGSPIR 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + ++ H YLIN E KS + ++ + +G S + HPGS L E Sbjct: 62 A--VMIHAVYLINCASEDPEIRTKSLASLTQSLRVGDAIGAS-VVLHPGSALRGHVGE-A 117 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 +AR AL +++ ++E+TAG G LG FE L +ID R+GVC+D+CH Sbjct: 118 IARAGGVFREALAESESSALLLEDTAGAGGTLGRSFEELRELIDAAGGGERLGVCLDSCH 177 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A+GYD+RT +T F VG L G+HLND+ + G+ DRH +LGEG +G Sbjct: 178 LLASGYDVRTIDGLSETLDRFDAAVGLGRLGGLHLNDSVNALGTNRDRHANLGEGELGET 237 Query: 243 AFRWIMQDDRFDGIPLILETINPD---IWAEEIAW 274 + + RF+ +P++LET PD AEEI + Sbjct: 238 GCMAFLSEPRFENLPVVLETPGPDKRGTSAEEIVY 272 >UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna RepID=END4_FINM2 Length = 277 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 10/282 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S + GL + EI+A F F +N R ++ + + ID+F + ++ Sbjct: 1 MNRIGCHLSTSKGLHKTIEQCLEINADTFQFFPRNPRGSKSRLIPKKEIDKFLELRKIHN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +I+ H +Y +NL + + + ++M++ + + ++ HPGSH Q EE Sbjct: 61 IN--KIVCHGAYTMNLCSDREDLRKLAVKLINEDMKKIQDMRINHYVLHPGSHKNQGIEE 118 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L I E IN D + G IE +G+GS LG + +A II+ + VCIDT Sbjct: 119 -GLKLIVEGINKV-DVSNGQMICIETMSGKGSELGCDIDQIAYIINNASIP--LYVCIDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F++G L + +F + +G ++ +H ND+ FG+ DRH G+G IG Sbjct: 175 CHLFSSGIRLDN---FDDYLDEFDKKIGIDKIKVIHCNDSMMPFGANKDRHEKFGKGLIG 231 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 ++ ++R P+ILET N D + EI ++ E Sbjct: 232 EQDLFNVIFNERLKDRPIILETPNDLDGYKIEIEEIRRNFNE 273 >UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Eurotiomycetidae RepID=A2QVN1_ASPNC Length = 436 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 145/250 (58%), Gaps = 12/250 (4%) Query: 26 ATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEAL 84 AFALF K+QR+W L D+F+ C ++ Y A+ ILPH SYL+NL Sbjct: 38 GNAFALFLKSQRKWDNPALQDDHRDQFRNLCIEHKYDGAKHILPHGSYLVNLAQEDKAKA 97 Query: 85 EKSRDAFIDEMQRCEQLGLSLLNF---------HPGSHLMQISEEDCLARIAESINIALD 135 +++ DAF+D+++RCE LG++L NF HP + Q S + R+A ++ AL Sbjct: 98 KQAYDAFLDDLRRCEALGITLYNFQYIPLPYTPHPTNPANQTSHASAITRLAAALTSALA 157 Query: 136 KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV--EDKSRVGVCIDTCHAFAAGYDLRTP 193 T VT V+E G GS +G I+ + E R+G+CIDTCH+FAAGYDL +P Sbjct: 158 ATSTVTPVLETMCGHGSTIGGYLHEFRDILSQIPKEYHHRIGICIDTCHSFAAGYDLASP 217 Query: 194 AECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRF 253 + +F+ +G +YLR +HLND+K+ GS+ D H ++G G +G AF +M + RF Sbjct: 218 SGFASFMQEFSDVIGIQYLRALHLNDSKAPRGSKRDLHANIGTGFLGLRAFHNVMNEPRF 277 Query: 254 DGIPLILETI 263 G+P+ILET Sbjct: 278 QGLPMILETP 287 >UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermophilus RepID=END4_THET2 Length = 270 Score = 287 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 97/285 (34%), Positives = 146/285 (51%), Gaps = 18/285 (6%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR L+ ++ F+A E Sbjct: 1 MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 A I H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 SGGLPAVI--HASYLVNLGAE-GELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L +++ +A +++ V ++ENTAG G +G +FE LA ++ + + VC+ Sbjct: 118 KEGAL----KALRLAGVRSRPV-LLVENTAGGGEKVGARFEELAWLVA----DTPLQVCL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHA+AAGYD+ + R VG + + +HLND+ GSRVD H L +G Sbjct: 169 DTCHAYAAGYDV--AEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGK 226 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEK 282 IG + + + D R ILET P+ A + L+A E Sbjct: 227 IG-EGLKRVFLDPRLKDRVFILETPRGPEEDAWNLRVLRAWLEEA 270 >UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phytoplasma RepID=END4_AYWBP Length = 292 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 10/286 (3%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M ++G+HV+ + A A A +++ + + I E + Sbjct: 1 MLFLGSHVAMKKPHNFQGSIQTAISYGANALMVYSGAPQNTIRSKTEELKIKEALKIAQN 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + + ++ H Y+INL +P + D E++R + ++ + HPG++L + + Sbjct: 61 NNLSLNNLVGHAPYIINLANPDKTKRAFAIDFLSQELERFAAMKINKMVLHPGNYL-KTN 119 Query: 119 EEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 ++ ++ IA+S+++ KT+ + +E AG+G+ +G + E L I V++K+RV Sbjct: 120 PQEGISLIAQSLDLIFAKTKHLKTQISLETMAGKGTEIGKRLEELQQIRTLVKNKTRVSF 179 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCH F AGYDL+ E+ +GF+ + +H+ND+K+ S DRH ++G Sbjct: 180 CLDTCHLFDAGYDLK--ENLEEIIQKIDSILGFQNVSVIHINDSKNECNSHKDRHENIGF 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWLKAQQ 279 G IG + I+ F IP ILET + + EI +K + Sbjct: 238 GKIGFETLLKIIYHRAFVCIPKILETPYINEKEPYKHEIEMIKTKN 283 >UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=END4_NATTJ Length = 284 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 128/279 (45%), Gaps = 4/279 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H+ +GG+ RA+E+ +F+ N W+ +T ++ D F E+ Sbjct: 2 RLGFHMPLSGGVGKQLNRASELGMECIQIFSGNPTSWKPGKITPKSRDLFIKKQEELQIK 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ++ H YLINL P + EKS +++ + + H GSH+ + E Sbjct: 62 P--LVFHTPYLINLASPKNDIREKSIYLLNAALEKAKAYDAPYVVTHIGSHVGE-GVEKG 118 Query: 123 LARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + ++ S+ + D +GV ++ENT+G GS LG L IID +G C DT Sbjct: 119 IDLVSYSLEKIMEDWPEGVELLLENTSGAGSTLGGSLTELKKIIDKFSGTQVLGCCFDTA 178 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HA+ AGYD+ E E T +G ++ H ND GS DRH +GEGNI Sbjct: 179 HAWGAGYDISNVKEVETTLELVNEQLGLDLIKVCHANDTNVPLGSTKDRHQHIGEGNITD 238 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 + F ++ D F +I+ET ++I + ++ Sbjct: 239 EGFGALLTHDSFTPKAVIMETPKNGTDCDQINLQRLKKV 277 >UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DP20_DESVM Length = 300 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 95/274 (34%), Positives = 132/274 (48%), Gaps = 12/274 (4%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S AGGL A A + A A +FT NQR+W + F+AA + + Sbjct: 1 MSVAGGLWRAVEHAVSVGAQALQVFTANQRRWEVPCPSDGDARRFRAAVSDWG--GGFVA 58 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE---EDCLA 124 H SYL NL P A +S E+ RC LG+ + HPG+HL E + Sbjct: 59 SHASYLFNLASPDEGAGARSVRGLAAEIGRCGLLGIPWVVLHPGAHLEGGDRQAVEHGVH 118 Query: 125 RIAESINI-------ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 R+A + GV ++ENTAGQG+ LG L I+D + R+GVC Sbjct: 119 RVAARLAAAFDAAGHLHPHADGVGVLLENTAGQGTCLGGDVADLGRIVDACPARERLGVC 178 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDT HA AAGYDL T + A VG +R H+ND+ + G+R DRH +G G Sbjct: 179 IDTAHACAAGYDLATEEGYARLMAAVEGAVGLGRVRLFHVNDSATPCGARSDRHAHIGLG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 ++G F +++D RF P++LET AE+ Sbjct: 239 HVGAAGFARLVRDPRFAAHPMVLETHKGKDMAED 272 >UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces RepID=D1XGI6_9ACTO Length = 279 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 8/277 (2%) Query: 8 VSAAGGLANAAI-RAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQI 66 + AGGLA + A E+ A A +F N R W P + F++ C + + Sbjct: 1 MPVAGGLAKIGLGYAKELAAEAVQVFVANPRGWATPPGNPAQDELFRSRCREESIPA--- 57 Query: 67 LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI 126 H YLIN G +E+S + ++R ++G + H GS E LA++ Sbjct: 58 YVHAPYLINFGSHTEATVEQSVRSLRHSLRRAREIGAQGVVVHTGSATGGRPREVALAQV 117 Query: 127 AESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 E + LD+ ++E+TAGQGS+L + + ++ ++GVC+DTCH Sbjct: 118 RERMRPLLDELTHDDDPFLLLESTAGQGSSLCSRTWDFGPYFEALDSHPKLGVCLDTCHI 177 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +AAG+DL PA +T TVG L+ +H ND+K G+ DRH ++G G+IG Sbjct: 178 YAAGHDLTGPAGMRQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGAGHIGAAP 237 Query: 244 FRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQ 279 F+ I DG+PL++ET + A ++A LK + Sbjct: 238 FQEIFAHPATDGVPLVIETPGGKEGHAADVARLKGLR 274 >UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_MYCHP Length = 283 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 13/280 (4%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M +G+H+S L + A F ++ + + I+++ C Sbjct: 1 MIKLGSHISFKKPDYLIGSFNEAINNGENCFMIYLGAPQSAFRVDSSLYNIEKYLKQCNS 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + I+ H Y++NL + E ++ E++R G LL HPGS + + S Sbjct: 61 I-IPVSDIVVHAPYIVNLAN--REKVDFGIKFLCSEIKRMNSFGAKLLVLHPGSSV-EYS 116 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + LA + +S+ ++ T+ V +E +G+GS + F L +I V + R+ +C+ Sbjct: 117 RSEALASLIQSLKKIIESTKDVIICLEIMSGKGSQICSNFNDLLYVIKSV-NSERIAICL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHA+ AGYD++ + + +R +HLND+ + GS+ DRH ++ +G+ Sbjct: 176 DTCHAWDAGYDIKDYENFKSYIK---QQNILPLIRVIHLNDSMNELGSKKDRHANIDKGH 232 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWL 275 IG + + + D FD IP+ILET N + +EI L Sbjct: 233 IGLEILKKFVHDKDFDNIPIILETPFINNKSPYKDEIIML 272 >UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID=END4_MYCAP Length = 278 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 13/280 (4%) Query: 1 MKYIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M +G+H+S L AA + A ++ + + + +E+ K Sbjct: 1 MIKLGSHISFKSPNYLLGAAAESVNNKANCMMIYLGAPQTTKRVSVEKYKYNEYLEKYSK 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 T I+ H Y++N + + D + E+++ +G L HPGS+ S Sbjct: 61 L-ITPDDIIVHAPYIVNPSSV--SKNKFAIDFLVQEIEKMNYIGAKYLVLHPGSYTT-FS 116 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 ++ L S+ L +T+ V +E AG+G+ +G F+ + I + + R VC+ Sbjct: 117 VQESLDTFIASVKQILSRTKDVVICVETMAGKGAEVGINFDQINYFIHKIRN-DRFAVCL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH F AGYD+R E + + + +++ +HLND+K++ GS DRH ++ +G Sbjct: 176 DTCHIFDAGYDIRKYEEFKA---EINKYNLLPHIKVIHLNDSKNSLGSHKDRHANIDKGF 232 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWL 275 IG + + D FD IP+ILET N I+ +EI L Sbjct: 233 IGLETLAKFVHDPDFDNIPIILETPWVDNKPIYDQEIKML 272 >UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XQR8_9DEIN Length = 282 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 17/278 (6%) Query: 2 KYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 + G H+S AG G+A A A + + F +F K+ R W+ L ++ F+A E Sbjct: 4 IHYGFHLSIAGKQGVAGAVAEAQRLGLSGFQIFAKSPRSWKTRNLGPGEVERFRAGRENL 63 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + A I H SYL+NLG E EKS + D++ + + LG+ L+ HPGS + Sbjct: 64 GHLPAAI--HASYLVNLGAT-GELWEKSIFSLADDLTKAQVLGIELVVVHPGSGEKKRIR 120 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E L ++ +A +G ++ENTAG G +G + E LA +I+G + +GVC D Sbjct: 121 EGALR----ALELAQIGKRGPKLLLENTAGGGERIGSRLEDLAWLIEG----TPLGVCFD 172 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCHAFAAGY L E+ + + +G + + +HLND+ +GS +D+H +L +G I Sbjct: 173 TCHAFAAGYPLHLEP--ERVIEELDQEIGLERVPLIHLNDSVGAWGSHIDQHANLRQGRI 230 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIW-AEEIAWLK 276 G +A R ++ R G ++ET + A +A L+ Sbjct: 231 G-EALREVVCHPRLRGKLFVMETERGETHDAHNLATLR 267 >UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03SD7_LACBA Length = 309 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 15/288 (5%) Query: 3 YIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 IG+HVS G L +A AA+ F ++T + R + I K + Sbjct: 5 LIGSHVSMKGKEMLLGSAQEAAQYGENVFMIYTGAPQNTRRKSIEGLNIPAAKTFMAAHE 64 Query: 61 YTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 +I+ H Y++NLG+ + + E+QR LG + HPG+H+ + Sbjct: 65 QR--EIVVHAPYVVNLGNTVKPANFQFAISFLTAEVQRAAALGAKQIVLHPGAHVGAGAP 122 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 I V +E AG+G+ +G FE LAAIID ++ VC D Sbjct: 123 AAIAQIAQGLDTILTAAESPVQIALETMAGKGTEVGRSFEELAAIIDAPPHNDQLSVCFD 182 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY + T + + +F +G L+ +HLND+K+ GS DRH ++G G + Sbjct: 183 TCHTSDAGYAIAT--DFDGVLNEFDHVIGLDRLKVVHLNDSKNPQGSHKDRHTNIGLGTL 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETI--NPD------IWAEEIAWLKAQQ 279 G D + + +P I+ET PD E+A LK QQ Sbjct: 241 GFDVLNAVAHHPQLTTVPKIMETPVIGPDRKHGVNPHGYEVAMLKHQQ 288 >UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SAA5_9ACTO Length = 296 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 131/288 (45%), Gaps = 12/288 (4%) Query: 1 MKYIGAHVSAAGGLA-NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 M IGAH+ GGLA + A A +F N R WR P + F A C + Sbjct: 1 MPPIGAHIQIKGGLATGGLAYTDAVAARAVQVFVGNPRGWRLTPGDPRQDARFTAGCAER 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 S H +L+N+G P +E+S + R QLG + H GS + + Sbjct: 61 GVPS---FIHTPFLVNVGSPTEATVEQSVATIAHNLARGAQLGCRGVVVHAGSAVGEDRY 117 Query: 120 EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ED L ++ E + L+ G ++E TAG G +L E L +E +GVC Sbjct: 118 EDALRQLHERLLPVLEAAPDDGPRLLVEPTAGGGRSLAATVEDLGPYFAALEHHPLLGVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCHA+AAG++L P T TVG L +H ND+ GS+ DRH ++G G Sbjct: 178 FDTCHAWAAGHELTVPGGMAGTLDALEATVGPGRLGLVHANDSLDECGSKRDRHTTIGAG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINP------DIWAEEIAWLKAQQ 279 +IG F ++ G+P+++ET + A +IA L + + Sbjct: 238 SIGVAPFAELLAHRSVAGVPVVVETPSERDGVASAGHAADIALLCSLR 285 >UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBK5_BREBN Length = 280 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 122/277 (44%), Gaps = 11/277 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +G HVS G AA A A++F F KN R P + + +A C++ S Sbjct: 3 VGCHVSIRHGYGEAARTAYNEGASSFQFFPKNPRSLGIKPFDARDAERCRAFCQQNGMLS 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H Y +NL E + + ++++ E G + H G + Sbjct: 63 ---IAHTPYPVNLCVEEQELFAVTVGSVRNDLEIAEACGALGVVVHFGQYKG-ADVLAGY 118 Query: 124 ARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + + +N LD G +IEN AGQG+ +G E L + + +VG C+DTCH Sbjct: 119 KFMIQMVNQILDGWNGKAQLLIENNAGQGNRMGTTLEELTQVRQLFAEPQKVGFCLDTCH 178 Query: 183 AFAAG-YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 AFA+G + E + F LR +HLND+ GS DRH S+G+G IG Sbjct: 179 AFASGLWKGNDWGEVADRMRELEY---FTSLRAVHLNDSVYPSGSFRDRHASIGKGMIGD 235 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLK 276 A +Q G+P++LET + EEI ++ Sbjct: 236 AAIATFLQTPELQGLPIVLETARGSEGGHGEEIKHVR 272 >UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC86_GEMAT Length = 299 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 8/271 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAA-PLTTQTIDEFKAACEKY 59 M +G+H GG+ AA RA A +F+ + + + + + ++ A E Sbjct: 1 MLLLGSHCLDEGGIPMAARRAGRAGMQALQVFSAVPKFYNDKVGVKPERLARWQEALEIA 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 ++ H +Y++N P E ++ E +R LG+ + FHPG+ Sbjct: 61 GIRPEHVIVHAAYVLNCATPDEEKWARAAAGLAKEFERSTTLGVKGVCFHPGAATDG-DR 119 Query: 120 EDCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVG 175 + +AR++E++ AL +IENTAG G+ +G E + A++ G+ D+ R G Sbjct: 120 DAAIARVSEAMRRALAAVPEGRTRLLIENTAGAGTTVGRTPEEVGAMLRGIPAADRHRTG 179 Query: 176 VCIDTCHAFAAGYDL-RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 +DTCH FA+G+ + + A + F + G + +HLND++ GS DRH + Sbjct: 180 YGLDTCHLFASGFPIAESRAALTEVLDAFEQATG-EPPAFLHLNDSEGACGSNKDRHRCI 238 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINP 265 GEG IG F W++QD R GIPLILET Sbjct: 239 GEGLIGATPFGWLLQDRRAQGIPLILETPQE 269 >UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus RepID=Q6L051_PICTO Length = 273 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH+S G+ N A ++ AF +F K+ R W+ I F+ K++ Sbjct: 7 KLGAHISIGNGIENVPEIAHSMNFNAFQIFVKS-RSWQEKEYKYDEIANFRNNVRKFNIE 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YLINL E +KS + +E++ C LG+ L HPGS+ + Sbjct: 66 GT--VAHAIYLINLASEN-EIRKKSINDLNNEIKICNDLGIDYLVVHPGSNP---DRKKG 119 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + ++ +T +IEN++G+G+ ++ IID + DK G+C+DTCH Sbjct: 120 IKMAIDAFQSM--ETGSTKILIENSSGRGNTFPSDINEMSGIIDSL-DKKHFGLCLDTCH 176 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A++ GYDL + + + + +HLND+K+ F S+ D H + G G IG Sbjct: 177 AYSYGYDLCKYDDFIYYMG---KKLELSRINVIHLNDSKTEFASKKDLHENPGSGRIG-S 232 Query: 243 AFRWIMQDDRFDGIPLILETINPD 266 R I D F I+E+ + + Sbjct: 233 CLRSIFYDRNFKDSTFIMESPDIE 256 >UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus RepID=C6CUT5_PAESJ Length = 276 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 11/279 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 YIG H+S G A+AA A AF F KN R + + C++Y Sbjct: 2 YIGRHLSIKEGYASAAKAAYSGGINAFQYFPKNPRSLGLKSFDRREAERCAELCKQYDIL 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + + H Y NL + +++ ++ ++++ G + H G + + Sbjct: 62 T---IAHSPYPTNLASEREDVRQRTVESLLNDLDIANSCGSIGVVVHFGVYKGKEPL-AG 117 Query: 123 LARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 I +S+N + G +IE +G+ + +G E LA I + +++ C+DTC Sbjct: 118 YQSIIQSLNEVTSRWNGNAKLLIEIQSGEHTFMGTTIEELAQIRGLCAEPAKLAFCLDTC 177 Query: 182 HAFAAG-YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H FA+G + T AE K +++ +H ND+ G+R DRH +LG G+IG Sbjct: 178 HMFASGLWHGETDAEWLKKAVSLGV---LEHVAAVHFNDSMFAAGARRDRHAALGSGHIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDI--WAEEIAWLKA 277 +W+M G+P ILET + + + ++ ++ Sbjct: 235 EAGLKWLMSVPALAGVPFILETPSDEDGSYGRQLNLMRE 273 >UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=END4_MIMIV Length = 312 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 16/293 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IG H++ + G +A A I + F +F +Q + + EF K+ Sbjct: 21 RIGRHINISKGFVSAPEYAKNIGCSVFQIFLGAPQQILSKARQKDELIEFGKQLIKHDLI 80 Query: 63 SAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLS--LLNFHPGSHL--MQI 117 ++ H SY INL HP + E S + + ++ +G + H G ++ ++ Sbjct: 81 ---MVVHGSYTINLCHPPGSKKFETSIKSLVKDLNATNLIGDRCLGVIIHMGKNISENKL 137 Query: 118 SEEDCLARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRV 174 + + + I AL +T T V+E A QGS + + LA I + D + RV Sbjct: 138 TVDQAIDNYVTGIKTALSQTPDNTTIVLETGASQGSEVASHIDGLAQIYWCLNDAERERV 197 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 CIDTCH +A GYD+ +P +K F +F + +G + + +H ND+K+ S+VDRH L Sbjct: 198 YFCIDTCHIWATGYDISSPTGVKKFFKEFDKKIGVEKISCIHFNDSKTGLESKVDRHADL 257 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEKA 283 G IG + + I + + I LI+ET NP+ +EI++ + K+ Sbjct: 258 CYGEIGSNGLKAIAKFAKEYKIHLIMETPLDAINPET-NQEISYNEEYNKVKS 309 >UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFN4_THEYD Length = 280 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 7/280 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M+ +G H S + NA A + F +F + R W+ + I++FK ++ + Sbjct: 1 MRPLGVHTSIKESILNAIEEAKNLQCETFQIFLHSPRIWKIPEFEEEIIEKFKKKIQENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + H SYLINL + + S+ E+ + LG H + ++ E Sbjct: 61 LSPF--VVHASYLINLISSNPKTINSSKYLLKREVLMSDLLGADYYVIHLKDN-REMQNE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + ++ E+ + K Q +IENTA S + + L + ++ GVCIDT Sbjct: 118 EIFDKVREAFSKIG-KLQKCKILIENTA--KSKITARISDLFDTFKNINTENVSGVCIDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+ + + F ++ +HLND+K++ GS +DRH +G GNIG Sbjct: 175 CHLFAAGYDISNEKVISEFIEEVKNFGDFNLIKLIHLNDSKASVGSGIDRHEHIGRGNIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 F + +PLILET ++I L A + Sbjct: 235 IKGFENFFKIKEISHVPLILETPKKSP-QDDIKNLTAVRE 273 >UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWW5_RUBXD Length = 289 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 18/282 (6%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H+ +GGL RAA++ A +F N + W P + D A K Sbjct: 8 IGRHLPTSGGLKRTLERAAQLGCEALQIFVSNPQGWAPPP---ERPDAGVLARGKLGAGL 64 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H YLINL P E E+S A E+ +LG L+ H GSH + E Sbjct: 65 CPVVAHAKYLINLSSPDGELRERSVRALAAELVAAGRLGADLVVVHAGSHGGEGEERGM- 123 Query: 124 ARIAESINIA--LDKTQG---VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 R+A ++ A L + G V+EN+ G G+ L F L + V VC+ Sbjct: 124 ERLARGLDAARGLAASLGGRAAEPVVENSCGAGTQLCSSFAALGRLARLAG----VRVCV 179 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HAF AGYDL TP + + + +HLNDA++ GSR D H +GEG Sbjct: 180 DTAHAFVAGYDLSTPEGAAGVAGELGEHLD-GRVALLHLNDARNGLGSRRDGHAKVGEGR 238 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 I +F + G+P ++ET P+ A EI +K Sbjct: 239 IPPGSFAALF--AALPGLPAVMETPYGTPEEDAREIERVKEL 278 >UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4V1_SCHJY Length = 320 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAA 163 ++LN +PGS+ + L +A+ IN A + T+ VT V EN AGQG LG F+ A Sbjct: 85 NMLNINPGSYA-SCEKSQALKNLADCINRAHEATENVTIVTENMAGQGQCLGGVFDDFAE 143 Query: 164 IIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + ++D SR VC+DTCH FAAG+D+RT E+ +F VG +++ G HLND+K+ Sbjct: 144 LKSLIKDTSRWRVCLDTCHTFAAGFDIRTQETYEQVIQEFDEKVGVEFVGGWHLNDSKAP 203 Query: 224 FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTE 281 GS D H +G G +G + FR I+ D R+DGIPL+LET P++WA+EI L A + Sbjct: 204 LGSNRDLHEHIGLGFLGLEPFRLIVNDPRWDGIPLVLETPAEKPEMWAKEIELLTAMIGK 263 Query: 282 KA 283 KA Sbjct: 264 KA 265 >UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZK8_ACIFD Length = 278 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 10/278 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HVSAAGG+ RA E A+ F + R WR + D + A ++ Sbjct: 2 RVGCHVSAAGGVLKMLERAGERGASVAQCFLGSPRSWRWSVGVAPEPDVVREAAQRAGVE 61 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 +I+ H SYLINL + ++S E +G + H GS + Sbjct: 62 --RIVVHASYLINLASVDAKLRDRSLALLRQTAIAAEGIGAESVVVHAGSAPGD-DPDAA 118 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 RI E + L+ T + ++EN A ++ L A+ + K RVGVC+DT H Sbjct: 119 RQRIREGLERVLEATSTIRILVENPA--TGSVASGPAELGALAGALRTK-RVGVCLDTQH 175 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FA G+ + A E+ + H ND+ S G DRH ++GEG IG + Sbjct: 176 LFAVGWAIDEAAGREEIVTALQAA--QVPVALWHCNDSASERGRGRDRHANIGEGAIGAE 233 Query: 243 AFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 A ++ D R ++LE AE++A ++A Sbjct: 234 ALCSLVADRRLPEADVVLEVPGAGDGPRAEDVAAVRAL 271 >UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788006 Length = 282 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 14/279 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS GG AA AA I + A+ F KN R + C++ Sbjct: 5 VRIGSHVSTRGGFLAAAQHAAGIGSLAYQYFPKNPRSLHLKTPDVRNAAACAKFCQEQGL 64 Query: 62 TSAQILPHDSYLINLG---HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 S + H Y N+ + + D+ +++ E G + H G HL + Sbjct: 65 VS---IAHTPYPTNMAVGLTRGEAFYQLTVDSLKNDLMIAEACGSLGIVVHFG-HLKSEN 120 Query: 119 EEDCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + I +N L G +IEN AG ++G E + + ++G C Sbjct: 121 VLEGYQNIIRCMNDVLSSWTGRAKLLIENQAGDHGSMGMTLEESVKVRQLADYPEKIGFC 180 Query: 178 IDTCHAFAA-GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 +DTCH FAA G+DL E + A ++ +HLND+K GSR DRH +G+ Sbjct: 181 LDTCHLFAAGGWDLSNTDELLARGKELAY---WESAVAVHLNDSKYGAGSRKDRHARIGQ 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETIN--PDIWAEEIA 273 G IG +A + ++ G +LE+ E+IA Sbjct: 238 GMIGTEALKRLVLAPELAGKAFVLESEKGADGTHREDIA 276 >UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Tomato big bud phytoplasma RepID=Q8KTG2_TOBBP Length = 208 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 5/208 (2%) Query: 23 EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTE 82 ++ F L++ + + + I + + ++ ++ H Y+INL +P E Sbjct: 1 SFNSNTFMLYSGPPQSTQRNIIEKDDIHKTLLKMKNHNININFLVGHAPYIINLANPSLE 60 Query: 83 ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQG--V 140 E S + E+ R Q+ + + HPG++L + ++ + + IA+ IN T Sbjct: 61 KREFSINFLTQELNRFSQMKIPQMVLHPGNNLHK-NKSEAIYWIAQGINKIFSNTPNLKT 119 Query: 141 TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTF 200 +E AG+G+ +G FE L IID +EDK+R+ +C DTCH F AGYD++ E T Sbjct: 120 KIALETMAGKGNEIGANFEELKNIIDLIEDKTRISICFDTCHVFDAGYDIKNQ--FENTI 177 Query: 201 ADFARTVGFKYLRGMHLNDAKSTFGSRV 228 F + + KYL +H+ND+K+ GS+ Sbjct: 178 KKFDKIINLKYLSVIHINDSKNCLGSKK 205 >UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Tax=Paracoccidioides brasiliensis RepID=C1GRM8_PARBA Length = 485 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 5/179 (2%) Query: 108 FH--PGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAII 165 H PG+ + Q + E L+R+++++ ALD T V V+E G G+ +G +++ Sbjct: 173 VHIGPGATI-QTTLESSLSRLSKALTSALDATTRVILVLETMCGHGTTIGGSLSDFKSLL 231 Query: 166 DGVED--KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + D +R+G+C+DTCH+FAAGYDLR+P K +F +G K+LR +HLND+K+ Sbjct: 232 SLIPDTYHARIGICVDTCHSFAAGYDLRSPGAWNKFMKEFDEEIGLKFLRALHLNDSKTP 291 Query: 224 FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 GSR D H ++G G +G AF +M + R +GIP+ILET E Q ++ Sbjct: 292 LGSRRDLHANIGTGFLGLRAFHNVMNEKRLEGIPMILETPIDRPANIEAETASGQPDDE 350 >UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseillevirus RepID=D2XAT9_9VIRU Length = 299 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 42/305 (13%) Query: 4 IGAHV--SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G+H+ S+ G+ + + ++ + L+ N + + + + + F+ + +K Sbjct: 5 VGSHIPFSSKFGVCKSIE-SIDLPLDCYQLYISNPKAFSSTEYNEKDLLSFRESGKK--- 60 Query: 62 TSAQILPHDSYLINLGHPVT--------EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 + H S + NL LE +R ++ C +G L H G+ Sbjct: 61 ----LFVHASLIYNLCGSKEGEGCPKYQRNLEFTRKGLSYDLDVCALMGAKGLVVHVGAA 116 Query: 114 LMQISEEDCLARIAESINIALDKTQGVT----------------AVIENTAGQGSNLGFK 157 E ++AE+++ L++ +T ++EN AG+G+ LG Sbjct: 117 ---KDREWGCRKVAETVDFVLNQKSKLTDRYSEILGRDIRKERVLILENCAGEGTKLGRD 173 Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAG-YDLRTPAECEKTFADFARTVGFKYLRGMH 216 L I +++K + CIDTCH FA+G D T +K + D+ + L H Sbjct: 174 IPELFTIWSLIQNKEQTRFCIDTCHGFASGTMDFGTTKGIKKFWKDWDENFPRESLCLFH 233 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHD---AFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 LND+K G +VDRH +L G I D + ++ + IPL+LE D +E+ Sbjct: 234 LNDSKGVLGCKVDRHETLLCGRIWEDKAQVLSYFLEGAKEREIPLVLE-RKDDTVEKELE 292 Query: 274 WLKAQ 278 + Sbjct: 293 ICRTL 297 >UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=END4_MYCMM Length = 252 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 28/278 (10%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IG+HVS LA A A +F N + W+A + + Sbjct: 2 LIGSHVSPQDPLAAAQAE----GAEVVQIFLGNPQSWKAPKP--------REDAAQLKAA 49 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + I H YLINL + SR +G + + H G ++ Sbjct: 50 ALPIYVHAPYLINLASANNKVRIPSRKILQQTCDAAADIGAAAVIVHGGHVADDNDLDEG 109 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 R ++++ V +ENTAG + F+ +A + D + D +G C+DTCH Sbjct: 110 FQRWRKALDQL---QTDVPVYLENTAGGEHAMARHFDTIARLWDVIGDTG-IGFCLDTCH 165 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A+AAG L + K + +H ND++ GS DRH +LG G I + Sbjct: 166 AWAAGEQLVHGVDRIKAVT--------GRIDLVHCNDSRDAAGSGRDRHANLGAGQIDPE 217 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 ++ P+I ET + ++IA+L+ + Sbjct: 218 LLVAAVRA---ADAPIICET-AEEGRKDDIAFLREKLN 251 >UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus RepID=B8DYW4_DICTD Length = 287 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H+ G I+ I LF+ + R +R T + + F Sbjct: 23 KLGVHLFRGGRSILEDIKLLRI--NTAQLFSGSPRSYRP---TNEKLPVF---------P 68 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H Y++N+ P + S I+E++ E+L L HPGS ++ +E Sbjct: 69 FNSVFIHAPYVVNIASPDEKVFNLSIKKVIEELKLAEELEWEGLIIHPGSS-KKMGKEVA 127 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 +++ L++ ++EN+AG+G G E +I + + CIDTCH Sbjct: 128 KRNFFKALEKILEEDIKAKLIVENSAGEGDGWGSTLEDFYSIHEEFPS---IYFCIDTCH 184 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGY+L+ P C++TF F + + L +H+ND+ GS D+H +G+G IG Sbjct: 185 LFAAGYNLKNPRVCKETFYSFFERIPVEKLVLIHINDSHFPLGSHRDQHAHIGKGAIGIG 244 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAE 270 F+ ++ IPLILET A+ Sbjct: 245 GFKNLLSIPEIRKIPLILETPKDSPMAD 272 >UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8U6_COPPD Length = 269 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 16/283 (5%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M Y G H++ + G + E+ +F +F ++ W P+ E + Sbjct: 1 MVYTGIHLNISDGTDAILKQIDELQIDSFQIFLESPLSW--TPMKGLYRFESLIERARND 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + H YL++L P KS +++ LG+ +HL E Sbjct: 59 FGVKTVFVHSPYLVHLASPRGSVRTKSWKKLKEDLSLASDLGIDGYV----AHLDMQHPE 114 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L + E + + ++EN A +G + + +C+DT Sbjct: 115 QELVFLEEYSRYLSMISSNIPLLLENVAAAK-FVGADPYFVLDVARQASTSYPAAICLDT 173 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H AAG+D+ E +K F + A +R +HLND K+ GS D H +LGEG+IG Sbjct: 174 AHLAAAGFDILQILE-DKRFEELAL-----RIRVVHLNDLKTPIGSSRDVHENLGEGSIG 227 Query: 241 HDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTE 281 + + +++ +G +ILET PD + +A LK E Sbjct: 228 YGPLKKMVRAQN-NGTSIILETPQDKPDNNRKNVAVLKKMLVE 269 >UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepID=A1SQS6_NOCSJ Length = 269 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 107/277 (38%), Gaps = 26/277 (9%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLT-TQTIDEFKAACEKYHYT 62 IGAHV A +A A RA E+ F + + ++ + KA E Sbjct: 9 IGAHVDQADPIAEA--RAREMPH--VQFFLGDPQGYQGPEFRYAGGAEALKADAEAAGVG 64 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H Y++N+ SR + +G L H G E Sbjct: 65 ---LYVHAPYIVNVATTNNRIRIPSRKLLQQHVDAAASIGARGLIVHGGHVNKDDDPEKG 121 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR---VGVCID 179 ++I + +IENTAG + + E + + D + + VG C+D Sbjct: 122 FDNWRKAIEAV---DLKLPLLIENTAGGDNAMTRYLERIGRVWDAISSAEQADLVGFCLD 178 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCHA A G L T D R G + +H ND++ F S DRH SLG G + Sbjct: 179 TCHAHAGGNSLET------VVDDVRRITG--RIDLVHCNDSRDAFDSGADRHASLGAGQV 230 Query: 240 GHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWL 275 D +++D G P++LET P + AWL Sbjct: 231 DPDLLAAVVRD---AGAPVVLETPGGPAEHRADAAWL 264 >UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Z7U8_BRAFL Length = 326 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 74/141 (52%), Positives = 98/141 (69%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA A I+A AF LF ++QRQW P+ F+ ACEK+ + Sbjct: 186 KFVGAHVSITGGIENAVENAVAINARAFGLFLRSQRQWACKPMEESAARLFREACEKHGF 245 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + QILPH SYL+N G P E L KSR+A +DE++RCEQLGL++ NFHPGS +I+ E+ Sbjct: 246 SPDQILPHGSYLLNCGAPNPETLRKSREALVDELKRCEQLGLTMYNFHPGSSCGEITVEE 305 Query: 122 CLARIAESINIALDKTQGVTA 142 CL RIA+SIN+A +T GVT Sbjct: 306 CLTRIADSINLAHQQTSGVTT 326 >UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 Tax=Frankineae RepID=D2S816_9ACTO Length = 270 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 114/284 (40%), Gaps = 34/284 (11%) Query: 4 IGAHVSA---------AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKA 54 IG HV AGG RAAE+DA LF + + W+A D Sbjct: 6 IGVHVGPGLTEDNELDAGGP---LARAAEMDADGVQLFLADPQGWKAPEPRPDAADLL-- 60 Query: 55 ACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 ++ H Y++N+ SR + +G + H G L Sbjct: 61 ------AGDVTVVVHAPYVLNVATTNNRIRIPSRKLLAAHAKAAAAVGAVGMVVHGGHVL 114 Query: 115 MQISEEDCLARIAESI-NIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + + ++ A D + +IENTAG G+ + + LA + D V + Sbjct: 115 AKDDPAAGVDNWRKTFARQAEDGGFPLPLLIENTAGGGNAMARDLDALARLWDAVGEFG- 173 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 G +DTCHA+AAG+DL T + + + +HLN+++ GS DRH Sbjct: 174 AGFVLDTCHAWAAGWDLATAVDDVRAIT--------GRVDLVHLNNSRDPQGSSRDRHAP 225 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLK 276 L +G I + +++ R P++LET AEEI L+ Sbjct: 226 LADGEIPTE---LLVEVARSADCPVVLETPGDAASHAEEITLLR 266 >UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putative n=1 Tax=Brugia malayi RepID=A8PDB3_BRUMA Length = 371 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHL 217 FE L II+ V++K RVGVC DTCH FAAGYD+R+ ++TF++F T+G +YLR H+ Sbjct: 232 FEELQQIINLVKNKKRVGVCFDTCHIFAAGYDIRSEDRYKETFSEFENTIGLQYLRAFHI 291 Query: 218 NDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 ND+ GS++DRH ++G+G + AFR ++ D RFDG+P+ILET D +AEE+ L Sbjct: 292 NDSMGDLGSKLDRHANIGKGKLKLAAFRNLIADQRFDGLPMILETPEGD-YAEEMIRLYH 350 Query: 278 QQTEKAV 284 K + Sbjct: 351 SLNSKPL 357 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACE 57 K +GAHVS AGGL + A I +FA F +NQR W + P+ + + F+ + Sbjct: 176 KMLGAHVSVAGGLEQSFYNALSIGCRSFAFFVRNQRSWNSPPIKAEVVQAFRETAQ 231 >UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V616_9AQUI Length = 156 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Query: 138 QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECE 197 + T ++E AGQ +G + + A+I E +GVC+DTCH ++AGY + + Sbjct: 5 RNTTFLVETLAGQKGEIGKTTQEIKALIQPFES-ENIGVCLDTCHIYSAGYKINKEKGFQ 63 Query: 198 KTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP 257 +F +G ++ +H ND+K+ F SR DRH +G+G+IG F + + D+ F +P Sbjct: 64 DYKDEFDTLIGLDKIKVIHCNDSKTPFNSRKDRHEHIGKGSIGLKGFEFFLNDEYFCRLP 123 Query: 258 LILETIN 264 ILET Sbjct: 124 FILETPK 130 >UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacterium acnes RepID=Q6A5M4_PROAC Length = 251 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 22/236 (9%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG HV A +A AA R A+I + + + W+ A E Sbjct: 6 IGGHVDTADAVAQAAARGADIA----QISLGDPKSWKKPVCDFPGGSL--ALREAAGEAG 59 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H +++IN+ SR + ++G + H G H+ + + Sbjct: 60 LTLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVH-GGHVRAG---EPI 115 Query: 124 ARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGV---EDKSRVGVCID 179 + ++ A+D + V +ENTAG + + E L+ + + VG C+D Sbjct: 116 EKGQDNWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLD 175 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 TCHAFAAG D+ + D G + +H ND++ GS DRH +LG Sbjct: 176 TCHAFAAGLDMAS------LVDDVRGITG--RINLVHANDSQGAVGSGRDRHANLG 223 >UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Antonospora locustae RepID=Q6E690_ANTLO Length = 194 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH+S + G+ + + A A+F K+QR + + + + F+ Sbjct: 49 LVGAHLSISKGIHTVQEQMDMLKAHTCAMFLKSQRTYNFKKIKDEDVSRFREHVR----F 104 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPH SYL+NL +P K D +D+++RC LG+ + N HPGS + ++ Sbjct: 105 PELILPHASYLVNLANP-EVMSGKGFDVLVDDLERCNLLGIKMYNIHPGSDVNKLGR-GA 162 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNL 154 L ++E++N L V ++EN AGQGS L Sbjct: 163 LELVSENLNRVLSIVPNVMVLLENMAGQGSVL 194 >UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLM2_HYPBU Length = 283 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 10/206 (4%) Query: 66 ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 + H Y IN P + +EKSR+ I ++ + + FHPG + S E+ L R Sbjct: 65 VSMHAPYFINFASPDKQTVEKSRERLIASVRAASWMNAYAVVFHPGYYKGNSSPEEALQR 124 Query: 126 IAESINIALD-----KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 E++ + +GV E T G+ + +G E + AI + +R V Sbjct: 125 TIENLRSVDEYIEQQGIKGVWIAPETT-GRTAQVG-SVEEVVAICRELRH-ARPAVDWAH 181 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNI 239 HA + G + + + + R +G ++ +H + +K +G ++ HH+L EG Sbjct: 182 IHARSLGKHVVSVDDVVRIVEYIERELGTWAVKPLHTHFSKIGYGEGGEKEHHTLAEGEY 241 Query: 240 GHDAFRWIMQDDRFDGIPLILETINP 265 G D +R + + + GI ++ + +P Sbjct: 242 GPD-WRIVCRAYKNLGIEAVVISESP 266 >UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL2_9BACT Length = 159 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 5/149 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 + G HVS AGGL R + +F+ + R W + ++ + A + Sbjct: 14 LPRFGLHVSTAGGLDRIFARGEALACGTVQIFSHSSRSWEFSLPDEPLLETYAGARSRAS 73 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ + H SYLIN+ + KS + E+ LG L HPGS Sbjct: 74 FS--DVFIHASYLINMASEDPDIARKSVETLEKELSTARLLGAKGLVLHPGSARGG-DRP 130 Query: 121 DCLARIAESINIALDKTQG--VTAVIENT 147 + R A I LD+ G ++ENT Sbjct: 131 KAVQRAASRIREVLDRVPGEAPPLLLENT 159 >UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endonuclease, similar to Rattus norvegicus GB:M13962 and Caenorhabditis elegans GB:Z47812 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVX5_MSEPV Length = 603 Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 102/271 (37%), Gaps = 34/271 (12%) Query: 28 AFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKS 87 F + + L++ T FKA K++ +I H Y+ N+ + + + Sbjct: 20 VLQFFLGSPFSY----LSSTTPIPFKAN--KHN----KIFIHSKYVGNIANSKSHV---T 66 Query: 88 RDAFIDEMQRCEQLGLS--LLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTA--- 142 E+ + L ++ FH + S+E + I S+ K + Sbjct: 67 ISNLKKEIVYLDTLNVNKCGSIFHLTKIVD--SKEKSINTIVSSLEKLSSKLDSLNLNTF 124 Query: 143 --VIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDTCHAFAAGYDLRTPAECEK 198 VI T+ ++G E LA I + + K+RV CIDT H F Y + T Sbjct: 125 NYVIIETSNIVDHIGSTIEDLALIYNKLSSHTKNRVRFCIDTAHIFNTYYAINTVKGIVD 184 Query: 199 TFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD------AFRWIMQDDR 252 F +G + +HLND++ S + H S+ EG I +D I Sbjct: 185 YLIKFDVLIGLNKVVAIHLNDSEGMPLSSIRPHISITEGKIFYDYKSKLSPLHIIKLFSL 244 Query: 253 FDGIPLILE--TINPDIW--AEEIAWLKAQQ 279 + IP ILE TI D+ +EI Sbjct: 245 YYNIPCILERKTITDDLSEINKEIKIFNNLN 275 >UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMJ6_AMEPV Length = 612 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 91/274 (33%), Gaps = 37/274 (13%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 KYIG H L F +++ + Y Sbjct: 13 KYIGFHT-IKEYLDK-------YKC-PLQFFVGAPHSYQSTEYLNK------------SY 51 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 T I H Y+ N+ ++ + +Q E + S H S ++E+ Sbjct: 52 TGRTIFVHSKYVGNIAKDKNSVALRNIKKELLYLQNME-INNSGTVVHL-SLYYNKNQEE 109 Query: 122 CLARIAESINIALDKTQGV------TAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSR 173 L +A +N + +I T +LG K E + D ++ K R Sbjct: 110 SLKYVANELNKFCKVLDNILDNNYFNHIIFETTNDIRHLGAKTEDFKILYDNLDSNAKKR 169 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 + CIDT H F Y++ T A F +G + +HLND+ S H + Sbjct: 170 IKFCIDTSHIFVTFYNINTVKGMINYLAKFDLLIGLDKIILIHLNDSCGLPLSSYKPHEA 229 Query: 234 LGEGNIG------HDAFRWIMQDDRFDGIPLILE 261 +G+GNI + + IP ILE Sbjct: 230 IGKGNIFKNYKDDLSSLHILKTYATLYNIPCILE 263 >UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_CALS8 Length = 286 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 40 RAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCE 99 + ++ + + +KY + H Y IN G E L+KS++ + ++ + Sbjct: 42 KGVNISKEKARQIGDEAKKYDIL---VSIHAPYYINFGSQEEEKLQKSKEYIYECVEVAK 98 Query: 100 QLGLSLLNFHPGSHLM---QISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGF 156 ++ + FHPGS +I+ E I E +N+ + + T G+ +NLG Sbjct: 99 EMRAERIVFHPGSCAKVDRKIAFETAKKAILEVVNVVREMKVEGIFLCPETMGKKNNLGS 158 Query: 157 KFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGM 215 + II+ + + ID H A G L+T + F +G++ +R Sbjct: 159 ----VDEIIEICKIDEFLLPTIDFGHINAFTGGGLKTKEDFVNLLKKFIEQLGYERMRRF 214 Query: 216 HLNDAKSTFGSRVDRHH 232 H + ++ + S+ ++ H Sbjct: 215 HSHFSRIEYTSQGEKKH 231 >UniRef50_B0K0T0 Xylose isomerase domain protein TIM barrel n=13 Tax=Clostridia RepID=B0K0T0_THEPX Length = 292 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 21/245 (8%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGL 103 ++ + E K +K++ T I H Y INL +E S+ ID + + +G Sbjct: 50 ISEKMAKELKEGAQKFNIT---ITVHAPYYINLATTDKTKMENSKRYLIDSLIAGKWMGA 106 Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIALDK-----TQGVTAVIENTAGQGSNLGFKF 158 + FHPGS + + ++ L R + + L + +T E G+ + LG Sbjct: 107 KRVTFHPGSGA-EGTRKEALERAKKLLKEILKEIEDKGLTDITLCPETM-GKKNQLGT-- 162 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHL 217 L +++ R+ ID H A ++ + + R +G + + +H+ Sbjct: 163 --LEEVLELCNVDKRIIPTIDFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHV 220 Query: 218 NDAKSTFGSRVD-RHHSLGEGNIG--HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAW 274 + ++ + + + RH +L + G + + + + + I +I E+ AE+ Sbjct: 221 HFSRIEYTDQGEKRHWTLKDTQYGPEFEPLAQLFYERKMEPI-VICESRG--TMAEDALK 277 Query: 275 LKAQQ 279 LK Sbjct: 278 LKEIY 282 >UniRef50_A3DNS0 Endonuclease IV n=2 Tax=Desulfurococcaceae RepID=A3DNS0_STAMF Length = 282 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 94/237 (39%), Gaps = 16/237 (6%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH 109 ++ E+ + H Y INL + +E S I ++ + ++ FH Sbjct: 48 EKAYKLGEEARKNDILLSIHAPYFINLASSKNKVIEASISRLIKSIEAASWMNAYIVVFH 107 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGV----TAVIENTAGQGSNLGFKFEHLAAII 165 G + + + + L ++ S+ ++ + + TAG+ S +G L II Sbjct: 108 LGYY-GEYNRNEALRKVINSLKQVIEYRNTMGYKRIILGPETAGKKSQIGG----LEEII 162 Query: 166 DGVEDKSRVGVCIDTCHAFA--AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + V ID H A G + + + + +G + + +H + +K Sbjct: 163 NISSLLDNVRPVIDWAHLHARSNGKLINSIDNVIEVIEIIEKNLGGEAVNPLHSHFSKIE 222 Query: 224 FGSRVD-RHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + S+ + RHHSL E G F + + GI ++ + +P + EI L+ ++ Sbjct: 223 YSSKGEIRHHSLKEKEYGP-CFETVCKGLCETGINSVVISESPLL---EIDALEMKK 275 >UniRef50_O27091 Endonuclease IV n=2 Tax=Methanobacteriales RepID=O27091_METTH Length = 279 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 98/283 (34%), Gaps = 26/283 (9%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 V G N + + A+ + L + K + Sbjct: 15 VGYRGSTVNVFSKIRAMGLDAYEY-----QATYGLRLKKENAIRIGENSRKNDIL---VS 66 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 H Y INL E +EKS + D E +G + FHPG + + L Sbjct: 67 MHGPYYINLSSARKETVEKSIERLFDCAVAAELMGAYRIVFHPGFY-GEHGRSGALGLCI 125 Query: 128 ESINIALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 ++++ +++ G + T G+ S +G L II E+ V ID H Sbjct: 126 KALDELIERLHGAGIREFTLAPETTGKRSQVGS----LDEIIKLSEEFDEVMPTIDFAHI 181 Query: 184 FA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGH 241 A G +R + +G +L H + + +R HHSL EG G Sbjct: 182 HARGGGCIRDASSYRGILERIESRLGSHHL---HCHFTGIEYTDAGERKHHSLSEGY-GP 237 Query: 242 --DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 + ++ D +D +I ET D A +I + + E+ Sbjct: 238 PIEPLIEVLVDGGWDAT-IISETPMKDTDARKIKGIIKEYLER 279 >UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine fever virus RepID=APE_ASFP4 Length = 296 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 33/267 (12%) Query: 9 SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP 68 S A + A + +F R+ ++ K + ++ Sbjct: 24 SIANYV--AFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHN----LWVVA 77 Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H +Y L P + E+ C+++G+ L H G+ ++ I E Sbjct: 78 HGTY---LDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPEL--------IVE 126 Query: 129 SINIALDKTQGVTAVIENTAGQGSNL-GFKFEHLAAIIDGVEDK--SRVGVCIDTCHAFA 185 + +GV +E + E + + + + ++G+CIDT H ++ Sbjct: 127 GLKKI-KPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWS 185 Query: 186 AGYDLRTPAE---CEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH- 241 +G ++ + + ++ + + ++ HLNDA + GS +DRH SL EG I Sbjct: 186 SGVNISSYNDAGQWLRSLENIHSVIPPSHI-MFHLNDAATECGSGIDRHASLFEGMIWKS 244 Query: 242 -------DAFRWIMQDDRFDGIPLILE 261 ++ P ILE Sbjct: 245 YSHKIKQSGLYCFVEYITRHQCPAILE 271 >UniRef50_B8D5D1 Endonuclease IV n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5D1_DESK1 Length = 288 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 13/223 (5%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH 109 ++ + E ++ H Y INL + + S + ++ +G ++ FH Sbjct: 48 EKARILGEASRGQGVKLSLHAPYYINLA-GREQVVNSSIERLTASVRISSVMGAYIVVFH 106 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAII 165 PG + S+ + +I +++ ++ + T+G+ S +G L +I Sbjct: 107 PGYYRDAPSKRGAVEKIIRNLSRVVEYRDQQGFKDVWLGPETSGKISQVG----DLEEVI 162 Query: 166 DGVEDKSRVGVCIDTCHAFA--AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + V ID H +A G +R+ + K + +G +YL +H + +K Sbjct: 163 EISSAFKGVRPVIDFAHLYARYMGRLVRSKEDIVKIVDVIEKKLGREYLNPLHTHFSKIE 222 Query: 224 FGSRVDR-HHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINP 265 F ++ HH+LGE G D FR + + G+ ++ + +P Sbjct: 223 FNRGGEKEHHALGEEKYGPD-FRIVCEALCEVGVDTVVISESP 264 >UniRef50_B0MRK4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRK4_9FIRM Length = 281 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 15/221 (6%) Query: 66 ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 + H Y I+L E + S + + ++ ++LG + + H GS +I+ + L Sbjct: 64 VTLHAPYFISLSSVEAEKRDNSVNYIAESLRAADKLGAAKVVVHSGSCA-KITRAEALYL 122 Query: 126 IAESINI--ALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 +++ AL +++G+ A+I T G+ + LG L +++ + C+D H Sbjct: 123 AKQTLAKAVALRQSEGLKAIICPETMGKINQLGT----LDEVLELCTLDDEMLPCVDFGH 178 Query: 183 AFAAGY-DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF-GSRVDRHHSLGEGNIG 240 A + +++T + T+G L MH++ +K + S RH + + G Sbjct: 179 LNARTHGEIKTIDDYSAMLDKIENTLGHDRLSQMHIHFSKIEYTNSGERRHLTFADEIYG 238 Query: 241 H--DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + ++ R +I E+ AE+ + +K Sbjct: 239 PQYEPLCELL-AKRNLNCTVICESDGTQ--AEDASLMKKAY 276 >UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8T0_BREBN Length = 273 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 82/222 (36%), Gaps = 27/222 (12%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLI---NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLL 106 ++ K ++ + H I NL +++ D ++ L + + Sbjct: 51 EQLKELKQQGNERGIAWSIHAP--ISGCNLAADAGPTRDQTLDTMKRCLEIASFLDCTHV 108 Query: 107 NFHPG---SHLMQISEEDCLARIAESI---NIALDKTQGVTAVIENTAGQGSNLGFKFEH 160 H G L + + +++++ L +EN LG+ E Sbjct: 109 VMHAGEVEDRLAETERARGVENVSQALHVLTSELSAESRTILTVENVPPYPKVLGWSVED 168 Query: 161 LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDA 220 L I V + SRVG+ D HA L P YL +HL+D Sbjct: 169 LMRICRHV-NSSRVGIVYDVGHAH-----LIRPGYAIDALQKV-----LPYLSALHLSD- 216 Query: 221 KSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 FG ++D H ++GEG I + +++D+ F G ++ET Sbjct: 217 --NFG-KLDDHLAVGEGTIPFEPILSLLKDNGFAG-HWVVET 254 >UniRef50_A6P1L7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1L7_9BACE Length = 282 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 19/240 (7%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFH 109 + + S + H Y INL +P E+L+K+ I + + +G + + H Sbjct: 47 ETARKLGAAAAANSVALSLHAPYFINLANPDPESLKKTTGYIIAACRAADWMGATRVVIH 106 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQGV----TAVIENTAGQGSNLGFKFEHLAAII 165 G+ LM+ + + S+ + G + T G+ + LG L ++ Sbjct: 107 SGA-LMKRTRREAQDIALNSLKEIVAAVDGEGFGHITLCPETMGKINQLG----DLDEVL 161 Query: 166 DGVEDKSRVGVCIDTCHAFA--AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + R+ CID H +A G +L C + +G + H + +K Sbjct: 162 ELCTLDERLTPCIDFGHLYARTLG-ELEGHEACVRMLDRVVEVLGEERASRFHSHFSKIQ 220 Query: 224 F--GSRVDRHHSLGEGNIGHDAFRWIMQ--DDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 F G H + + G D +M R I E+ AE+ +K Sbjct: 221 FTLGGGEKMHLTFDQDEFGPDP-APLMAEIARRNWNPTFICESAGTQ--AEDAVTMKKLY 277 >UniRef50_A8ABG7 Endonuclease IV n=2 Tax=Archaea RepID=A8ABG7_IGNH4 Length = 283 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 34/276 (12%) Query: 18 AIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINL 76 R E+ A L F + R + A + + H Y +NL Sbjct: 28 IKRVKELGLDAMELEFVRGVRMSEEKA---------REAGKVARELDVVLTAHAPYYVNL 78 Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDK 136 P E ++S + + + G + FHPG ++ + + RI +++ +++ Sbjct: 79 ASPEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKK-APSVVYKRIRDALAEVVER 137 Query: 137 TQ----GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA-FAAGYDLR 191 + V E L KF L +I ++ V C+D H + G+ Sbjct: 138 VKELGLDVWIRPETM-----ELKSKFGSLDEVIKLSQEFDIVLPCVDFAHLRYREGW--N 190 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR---HHSLGEGNIGHDAFRWIM 248 + E + +G L MH++ + G ++D+ H +L E ++ ++ Sbjct: 191 SKEEFRAVLEKLEKELGRFALDNMHIHVS----GIKLDKHGTHLNLEESDMRWKELLEVL 246 Query: 249 QDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 ++ G+ LI E+ N + E+ +K + ++ Sbjct: 247 KEFNVKGV-LISESPNLE---EDAVMMKKYWYQLSI 278 >UniRef50_D1PP50 Deoxyribonuclease IV n=6 Tax=Clostridiales RepID=D1PP50_9FIRM Length = 286 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 22/243 (9%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGL 103 L + AC + + + + H Y I++ + S D + + LG Sbjct: 48 LALDKAEALGKACAEKNISLS---VHAPYYISMSSLEEDKRLHSIDYLLQSCALVKALGG 104 Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGV----TAVIENTAGQGSNLGFKFE 159 + FH GS + S E+ L + +++ A++ + T G+ + LG Sbjct: 105 RRVIFHTGSC-GKQSREEALEKALDTMRRAVEACDAAGFADCILCPETMGKVNQLGT--- 160 Query: 160 HLAAIIDGVEDKSRVGVCIDTCHAFA--AGYDLRTPAECEKTFADFAR--TVGFKYLRGM 215 L ++ + R+ CID H +A G E A + +G + Sbjct: 161 -LDEVLALCQVDERITPCIDFGHLYARSQGVQFAEATATEDYAALLDKLQVLGPERASRF 219 Query: 216 HLNDAKSTFGSRVDR-HHSLGEGNIGH--DAFRWIMQDDRFDGIPLILETINPDIWAEEI 272 H + ++ + ++ H + + G ++++ +I E+ AE+ Sbjct: 220 HAHFSRIAYTKGGEKCHLTFADTEYGPPHAPLLALLKERGLAPT-IICESAGTQ--AEDA 276 Query: 273 AWL 275 A L Sbjct: 277 AVL 279 >UniRef50_D2RI59 Xylose isomerase domain protein TIM barrel n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RI59_ARCPR Length = 268 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 109/277 (39%), Gaps = 30/277 (10%) Query: 9 SAAGGLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 S GG+ E+ A + F + + + K E + ++ Sbjct: 16 STIGGIRTI----RELGLDAMEVQFVR------GVKMGIDMAKQVKEVAESLNV---KLS 62 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 H Y IN+ + L+ S + ++ + + FHPG +L S+E RI Sbjct: 63 VHAPYYINM-NADGVKLKGSIERLKKTVEIGG-IFAKDIVFHPGYYLKH-SKETTYRRIR 119 Query: 128 ESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 +++ ++ + +GV E T G+ + G E + +E + CID H A Sbjct: 120 DNLKPVVEFARDRGVMLRPETT-GKPTQFG-DLEETLRLCQELE----ILPCIDFAHIHA 173 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHDAF 244 + E + T+G L+ +H++ + +G + + RH +L E + ++ Sbjct: 174 RYRAFNSYEEFCQILETVENTLGSDALKMLHVHVSGIEYGLKGEKRHLNLKESDFKYEDL 233 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 ++D DG +I+E+ N + E+ LK E Sbjct: 234 LRALKDFSVDGT-IIVESPNLE---EDALMLKKLWLE 266 >UniRef50_D1J987 Putative uncharacterized protein n=2 Tax=environmental samples RepID=D1J987_9ARCH Length = 263 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 25/252 (9%) Query: 37 RQWRAAPLTTQTID-EFKAACEKYHYTSAQILP-HDSYL--INLGHPVTEALEKSRDAFI 92 + W Q ++ +FK + T+ I H L IN+ E+S Sbjct: 29 QGWEIVGEGLQKVEGKFKERVRELSETTNLIFSLHSP-LSDINIASVNERMREESIRQIK 87 Query: 93 DEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIALD--KTQGVTAVIENTA 148 + + + + HPG S L E + S+ D +G+ +EN Sbjct: 88 ECIDAAYEFIADICVVHPGFFSPLTVQMPEKAFQKAIASLTTICDFAAERGLRIALENLT 147 Query: 149 GQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVG 208 +G E L I+ GV + +G+C+D HA T ++ A V Sbjct: 148 SAKMLMGRDPEELNRIVRGV-NADNLGLCLDVAHA-------NTTKTLDEFLNKKATAV- 198 Query: 209 FKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIW 268 +H++ + FG+ D H LGEGN+ + ++D + G+ ++LE + Sbjct: 199 ----EIIHMHVS-DNFGAD-DLHLPLGEGNLDYKKVLAWIKDYEYRGV-MVLELYTLEGG 251 Query: 269 AEEIAWLKAQQT 280 E +A ++ T Sbjct: 252 IESLALIQKLLT 263 >UniRef50_A1RYK4 Endonuclease IV n=10 Tax=Archaea RepID=A1RYK4_THEPD Length = 291 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 101/277 (36%), Gaps = 26/277 (9%) Query: 10 AAGGLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP 68 + GG+ + + A + F + L ++ E K + + Sbjct: 19 SKGGVKEGMLEVKRLGLDAMEIEFVR------KIFLDDKSAQEVKKLRHELEI---VLTV 69 Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI-- 126 H Y +NL ++ S + + + + G + FH G + E ARI Sbjct: 70 HAPYYVNLNSADESKVKASAERVLRSAEVGFKAGAWSVCFHAGYY-GDSEPESAYARIKS 128 Query: 127 -AESINIALDKTQGVTA-VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 +I L + +GV + G+ S G L +I E+ V ID H Sbjct: 129 EVAAIARQL-RDEGVEIWLRPEVLGKPSEFGS----LEEVIRLSEEVENVLPTIDFAHLH 183 Query: 185 AAGY-DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHD 242 A G LR + +G L MH++ + +G + + RH +L E ++ + Sbjct: 184 ARGKGALRQYQDFAAVLDALESRLGRIALDNMHIHVSGIEYGEKGEIRHLNLTEADLDYK 243 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 +++D G+ +I E+ N + ++ LK Sbjct: 244 LLVKVLRDYNVKGV-VISESPNLE---QDALLLKELY 276 >UniRef50_A5ULU0 Endonuclease IV, xylose isomerase-like TIM barrel family, Nfo n=4 Tax=Methanobrevibacter RepID=A5ULU0_METS3 Length = 278 Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 93/280 (33%), Gaps = 26/280 (9%) Query: 5 GAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSA 64 G+ V+ G A E ++ + + ++ K EK+ Sbjct: 11 GSPVNYKGAAYKAPKYIKEEGLDSYEY-----QSPYGVRIGEKSAKILKEESEKHDIL-- 63 Query: 65 QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM---QISEED 121 I H Y INL E ++KS + I + E +G L FHPG + + E Sbjct: 64 -ISMHGPYYINLCSKEEEKIKKSLNHLIATARAGEWMGAYRLVFHPGFYSNRKPGKAMEI 122 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 I + + T G+ S G +++ II+ +D Sbjct: 123 SKNTINQLFEELEAEGIEEFTFAPETTGKRSQQG----NVSEIIELCASFDHFEPTVDFA 178 Query: 182 HAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEG-N 238 H A G L + F+ + +H + +G+ + +HH+L E Sbjct: 179 HVHARGRGFLNKKEDYNCIFSQLEDNLDID---ILHCHFTTIEYGNGGEVKHHTLAESNE 235 Query: 239 IGH---DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 G D ++ + I I ET D A ++ L Sbjct: 236 YGPDIKDLLANLIDNGWRANI--ICETPLRDEDALKMKEL 273 >UniRef50_A4J1S8 Endonuclease IV n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1S8_DESRM Length = 284 Score = 99.1 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 88/235 (37%), Gaps = 17/235 (7%) Query: 53 KAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 + EK + H Y INL ++ K++ +D ++ + + FHPG Sbjct: 53 RELGEKARQFGVALSIHAPYYINLSTEESDKKIKTKGYILDSLRVARWMEAKTVVFHPGG 112 Query: 113 HLMQISEEDCLAR----IAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 + + R E + + + T G+ + +G L +++ Sbjct: 113 GPG-TNRGETFNRSKILFREILQEIAAEGLQDILLAPETMGKINQMGS----LEEVLELC 167 Query: 169 EDKSRVGVCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFG-S 226 +V CID H A + L+T + K +G + ++ +H++ + F + Sbjct: 168 SLGEQVVPCIDFGHLNAVSQGSLKTKDDYAKILDIIENQLGKEVVKHLHVHFSIIEFTKA 227 Query: 227 RVDRHHSLGEGNI---GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 +H +L E ++ ++ + + + + +I E+ AE+ K+ Sbjct: 228 GEKKHWTLRESHLYGPDFAPLAELIVERQMEPV-IICESAGTQ--AEDALIFKSM 279 >UniRef50_B1L7K8 Endonuclease IV n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7K8_KORCO Length = 281 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 91/257 (35%), Gaps = 26/257 (10%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI 74 A EI A + RA P + + + + H Y I Sbjct: 20 ERAFSYLREIGLDAMEY-----QAVRAIPKNEDVLSWVRKEASENDI---MLSLHAPYAI 71 Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL 134 NL E E S ID ++G + FHPG + ++S ED L E++ Sbjct: 72 NLCS--EEKGEASIKRLIDSGIAASKMGAGHITFHPGYY-GKMSGEDALRAAIEALKRVR 128 Query: 135 DKTQGVTAVIE---NTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AGYDL 190 D + +E T G+ S LG L ++ E+ V ID H A G + Sbjct: 129 DGLNSLGINLELGPETTGKPSQLGS----LDEVLRMSEEVDGVRPTIDFAHIHAREGGSI 184 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLND---AKSTFGSRVDRHHSLGEGN-IGHDAFRW 246 R + E+ +G +H + AKS G R+ HH LG G + Sbjct: 185 RGRGDYERILRTIEGRLGDLNGLIIHFTEVELAKSGIGERM--HHDLGSGYGPPFEPLAE 242 Query: 247 IMQDDRFDGIPLILETI 263 I+ + I +I E+ Sbjct: 243 IIAEYGLRWI-VISESP 258 >UniRef50_B1I648 Xylose isomerase domain protein TIM barrel n=3 Tax=Clostridiales RepID=B1I648_DESAP Length = 287 Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 14/204 (6%) Query: 53 KAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 +A E+ + H Y INL + KS+ + M+ +G S + FHPGS Sbjct: 53 RALGERASENGIALSIHAPYYINLAGEDPVQVAKSKVHLLKSMRAAHWMGASRVVFHPGS 112 Query: 113 HLMQISEEDCLARIAESINIALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGV 168 ++ + L R ++ AL++ V+ T G+ S LG L +++ Sbjct: 113 --VRGDRKGALRRAQAALEAALEEAAREGLDSVNVLPETLGRYSYLGL----LDEVLELC 166 Query: 169 EDKSRVGVCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 V CID H A G + +G LR +H++ + F ++ Sbjct: 167 RVAPTVIPCIDFGHVHAITGGLMTDREAYAAVLDRVGAALGKDVLRTLHIHFSPVEFTAK 226 Query: 228 VD-RHHSLGEGNIG--HDAFRWIM 248 + RH +L + G ++ Sbjct: 227 GERRHRTLADEGYGPNFGPLAELL 250 >UniRef50_A8MDH2 Xylose isomerase domain protein TIM barrel n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDH2_CALMQ Length = 279 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 32/252 (12%) Query: 22 AEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPV 80 +I A + F + R ++ + + + H Y INL Sbjct: 29 KDIGLNAMEVEFVRGVR------MSITDAENAGKLAREIGVRLS---IHAPYFINLCSDK 79 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL-----D 135 +E S ++ ++R E +G +++ FHP ++ ++ E C + ES+ + + Sbjct: 80 DSTVEASIKRLMESLERGEAMGATVVVFHP-AYYGKLGPEGCYNAVRESVMRVIELMGKE 138 Query: 136 KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPA- 194 V +E A + S G E ++ + + V V +D H +A R Sbjct: 139 GISHVKLGLEVMARR-SQFGG-LEETFKLVKEINNPQVVAV-VDWGHIYA-----RNGGS 190 Query: 195 -ECEKTFADFARTVGFKYLRGMHLNDA--KSTFGSRVDRHHSLGEGNIGHDAFRWIMQDD 251 + + + G + MH + K G VD H + N + + + Sbjct: 191 IDYKAILNMWREYFGNQ---PMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPLAQELAKE 247 Query: 252 RFDGIPLILETI 263 I +I E+ Sbjct: 248 DL-DITIICESP 258 >UniRef50_B8DYJ2 Xylose isomerase domain protein TIM barrel n=2 Tax=Dictyoglomus RepID=B8DYJ2_DICTD Length = 264 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 98/257 (38%), Gaps = 36/257 (14%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAA-PLTTQTIDEFKAACEKYHYTSAQILPHDS 71 + A ++ LF +R ++I EF + H Sbjct: 14 SVKRAISITKKLGGNTLELFGDLVLFYRGKFCEKPESIKEFAVK------NDIFLTMHLP 67 Query: 72 YL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG----SHLMQISEEDCLARI 126 Y+ INL E EKS ++ + ++ E+ G+ HPG SHL+ I R+ Sbjct: 68 YIDINLASFNDEIWEKSIESILKAIEYGEKAGIKRAVLHPGGVPLSHLVLIFLAQ--RRL 125 Query: 127 AESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 +++ L+K + V IEN + +++ + I G K + VC D HA Sbjct: 126 RKALEFILEKAEKYDVEVCIENPYFEENDIFSNVDQFYKFIKGFGGK--LKVCFDFGHAH 183 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAF 244 + + + ++ +H++D D H SLG+G+I + Sbjct: 184 ------ISKKGIDYSLNLLK-----PFITHVHIHDNHGE----KDEHLSLGKGSIDFKKY 228 Query: 245 RWIMQDDRFDGIPLILE 261 +++ FDG +ILE Sbjct: 229 LDFLRN--FDGT-IILE 242 >UniRef50_Q12UI4 TIM alpha/beta barrel protein n=7 Tax=cellular organisms RepID=Q12UI4_METBU Length = 298 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 19/266 (7%) Query: 9 SAAGGLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 S G + R A++ L F + R + +T + E+ + + Sbjct: 38 SKKKGSIDGIRRIAQLGLGCMELEFVRGVR------MKEETAANVRQTAEEENV---ALS 88 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE--DCLAR 125 H Y INL E + S + + G S + FHP + S++ + + Sbjct: 89 VHAPYYINLNSAEEEKITASVQRIYESARIGALCGASSIVFHPAYYQGHSSKKVMEKVTG 148 Query: 126 IAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 + E + L + T G+ + G E + +E V CID H A Sbjct: 149 LLEGLTSGLSDEGIDVVLRPETTGKATQFG-SLEETLMMATAIEG---VMPCIDFSHLHA 204 Query: 186 -AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHDA 243 + + T E +G + L MH + + +G++ ++ H L E ++ + Sbjct: 205 RSCGEYNTIEEFRSVLESVESALGREGLENMHCHISGIAYGNKGEKNHLILQESDLNYTD 264 Query: 244 FRWIMQDDRFDGIPLILETINPDIWA 269 + ++ G+ +I E+ N + A Sbjct: 265 LMAVFREFDVKGL-VICESPNLEDDA 289 >UniRef50_A1RRV6 Endonuclease IV n=17 Tax=Thermoprotei RepID=A1RRV6_PYRIL Length = 283 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 28/253 (11%) Query: 17 AAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN 75 A E+ A + F + R ++ + + A ++Y+ ++ H Y IN Sbjct: 31 AVRVVRELGLNAMEVEFVQGVR------MSRELAKQVGKAAQEYNI---KLSVHAPYFIN 81 Query: 76 LGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALD 135 L T+ +EKSR +D + R +G ++ H ++ ++ + C ++ E + A Sbjct: 82 LCSEETDKVEKSRQRLVDSLDRAYYMGAWVVVVHA-AYYGKLGPQKCYEKVKEELEKAYK 140 Query: 136 K---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 + GV +E TA + + G + ++ V +D H +A + Sbjct: 141 ESGVGSGVYVGVEITA-RTNQFGS----IEETFKLAKELPFVTPVVDWGHLYARNNGVLN 195 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTF--GSRVDRHHSLGEGNIGHDAFRWIMQD 250 + + + G +++ H + + G VD H + + + Sbjct: 196 ---YGEVLDLWTKEFGDRHM---HTHFTSIRYRNGKYVDEHEPIERNMPPFEPLAKELSA 249 Query: 251 DRFDGIPLILETI 263 I LI E+ Sbjct: 250 RDIT-ITLICESP 261 >UniRef50_B8PE96 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8PE96_POSPM Length = 320 Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 15/86 (17%) Query: 210 KYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI------ 263 +YLRGMHLND+K S+ DRH ++G G +G AF ++ D R +PLILET Sbjct: 169 QYLRGMHLNDSKGALSSKKDRHENIGLGELGLAAFAHVLADPRTRYLPLILETPAFDTPG 228 Query: 264 ---------NPDIWAEEIAWLKAQQT 280 D+W +E+ L T Sbjct: 229 AGGGLGATGGMDVWRKEVEVLNRLAT 254 >UniRef50_Q58707 Uncharacterized protein MJ1311 n=11 Tax=Methanococcales RepID=Y1311_METJA Length = 293 Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 19/192 (9%) Query: 53 KAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 K E +I+ H + +N + + + D ++ +L ++ HPG Sbjct: 62 KYLMELRDRYEVEIVVHAPFSDLNPASMNERVRKLTVECIRDAIEGAFELDSEVVVVHPG 121 Query: 112 S--HLMQISEEDCLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 L + L +++ ++ + G+ +EN LG E L I+ Sbjct: 122 YIPELWSNYVSEILDNNFSTLSEIVEIAEDYGIKIGLENMPNFRGVLGITPESLLEIVKD 181 Query: 168 VEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 ++ K+ +G+ D HA AG PAE + + +G + +H +D Sbjct: 182 IDSKN-LGITFDIGHANTAG----NPAEFVEKLQNI--GIGIIH---VHAHDNNG----Y 227 Query: 228 VDRHHSLGEGNI 239 D H +GEGNI Sbjct: 228 DDEHLKIGEGNI 239 >UniRef50_D1Z1Z5 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Z5_METPS Length = 255 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 79/262 (30%), Gaps = 49/262 (18%) Query: 19 IRAAEIDATAFALFTKNQRQWRAAPLTT--------------QTIDEFKAACEKYHYTSA 64 + + + ++F + W + +K Sbjct: 5 AKGIRLGFSTLSIFMRPPESWADTAIKDNFNAMEILCEGPMWPRSGLWKEKLLGAGNNGL 64 Query: 65 QILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE--ED 121 + H + +N E++ + + +G S + HPG + E Sbjct: 65 DVYLHAPTVDLNPASVNRGIREETLKQLKEALDMAAGIGASHVTTHPGIIHKPLPRIWEM 124 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 C+ + + A D +G VT IEN + + L E L GV ID Sbjct: 125 CMEYAMQVLGEAADYAKGHNVTLSIENMPNKPTYLCTSAEELDKFRRNCG----CGVTID 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA + P F R G YL H+ND D H G+G + Sbjct: 181 VGHA------ITCPDPV-----SFLRLGGISYL---HVNDNMGD----KDSHLCPGDGIL 222 Query: 240 GHDAFRWIMQDDRFDGIPLILE 261 + + M D +I+E Sbjct: 223 DLNLLK--MHDR------MIIE 236 >UniRef50_D1YXJ1 Putative endonuclease IV n=1 Tax=Methanocella paludicola SANAE RepID=D1YXJ1_METPS Length = 291 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 94/282 (33%), Gaps = 42/282 (14%) Query: 1 MKYIGAHVSAAG--------GLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDE 51 M IG AG G + A + F +N +T + Sbjct: 24 MIRIG----IAGIPYHAKGEGTEAGIRYLCSVGLDAMEVQFVRN------VYMTPGSAPA 73 Query: 52 FKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 + ++ + H Y INL EKS+D + ++ + LG ++ FHP Sbjct: 74 SGSVAKECGL---ALSVHAPYYINLTSKKEATQEKSKDWILRSLRIADPLGARIVVFHP- 129 Query: 112 SHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 + E + E ++ +E T G LG + I+ V Sbjct: 130 --AREKEPEVLKRHLVELSESRKNEKIKALIGLEVT-GDEPELG-SVDDYLDILREVPGT 185 Query: 172 SRVGVCIDTCHAFA---AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 + ID H A G LRT + E F + K H++ + + + Sbjct: 186 D---IVIDWSHVHARTNGG--LRTRDDYEDI---FDKLKPVKK-NNFHMHFSNVEYKNGR 236 Query: 229 D-RHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWA 269 + RH LG + I+++ + D +I ET + A Sbjct: 237 EVRHLPLGS-QPPFEPLAQILKERKIDAT-IICETPLQEDDA 276 >UniRef50_C6A0Y0 Xylose isomerase domain-containing protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A0Y0_THESM Length = 258 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 84/220 (38%), Gaps = 35/220 (15%) Query: 67 LPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE-----E 120 + H + +N+G + S + + + ++G +L+ HPG + S E Sbjct: 62 IIHAPFSDVNMGSLNEKIRRISLELLFETFEIAHEMGSALVVIHPGHYSPLSSRFPKAYE 121 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 R E I+ + G+T +EN G E + ++DG E + V D Sbjct: 122 KVQKRSLEEISKI-SQKIGITVALENMPSYPILDGQTPERIKELVDGTE----ILVTFDI 176 Query: 181 CHAFAAGYDLRTP-AECEKTFADFARTVGFKYLRGMH-LNDAKSTFGSRVDRHHSLGEGN 238 H L T A+ ++ + + +L H ND+ H +LGEGN Sbjct: 177 GH-------LNTVNAQFDRFIELLEDRIIYAHLSDNHGANDS----------HLALGEGN 219 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 I ++ ++ + IP+ LE + + + +L Sbjct: 220 I---PWKTLIN--QLRNIPMSLEVKTFEDILKSLEFLNKM 254 >UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepID=A5I5J9_CLOBH Length = 272 Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 14/228 (6%) Query: 56 CEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM 115 E+ + + + H SY INL E EKS + I + +Q+ L FHPG +L Sbjct: 56 LEEKNNNNFYLSAHGSYFINLNADEIEKQEKSMERIIKGAEGLKQVQGRSLIFHPGFYL- 114 Query: 116 QISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 + S+E+ I E++ D T G+G+ G E A+ V+ Sbjct: 115 KDSKEETFKTILENLKKLPDLGVDYRL---ETTGKGTQFG-SLEENVALCKEVDTCK--- 167 Query: 176 VCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHS 233 +CID H A + L++ + + + +G L MH++ + + + +R H Sbjct: 168 LCIDFSHIHARSNGGLKSYKDFYNILSYVEKNLGRSALDDMHIHLSGIHYSEKGERNHLP 227 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 E + + A +D G +I E+ I ++ LK E Sbjct: 228 FEESDFNYIACLKAFKDFDIKGC-VICESP---ILEKDALLLKNSYYE 271 >UniRef50_C5A4T0 Deoxyribonuclease IV (BER) (Nfo) n=2 Tax=Thermococcus RepID=C5A4T0_THEGJ Length = 257 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 85/232 (36%), Gaps = 29/232 (12%) Query: 50 DEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNF 108 + +K + ++ H + +N+G + + S + + + +L + Sbjct: 45 ETWKTYADVLGSFELKVTVHAPFSDVNIGSLNEKLRKASLEVLAETLDVASRLNALAVTV 104 Query: 109 HPGSHLMQISE-EDCLARI-AESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAI 164 HPG + + R+ +S+ G+ +EN E LA + Sbjct: 105 HPGHCSPASRKFREDYNRVHRDSLRELERFSGEFGIRVGVENMPAFLILDAQTPERLAEL 164 Query: 165 IDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF 224 +DG+ +GV +D H G+ F F +G + +HL+D Sbjct: 165 LDGIN----LGVTLDLGHLNTVGFP----------FERFMELLG-DRIVHVHLHDNSG-- 207 Query: 225 GSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 + D H LG+G + +R ++ + G+ LE D +A+L+ Sbjct: 208 --KSDEHLPLGKGTV---PWREVL--PQLGGLTWALEVSGLDDARVSLAFLR 252 >UniRef50_A5UMM8 Predicted sugar phosphate isomerase/epimerase, AP endonuclease family 2 n=4 Tax=Methanobrevibacter smithii RepID=A5UMM8_METS3 Length = 239 Score = 83.7 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 34/237 (14%) Query: 22 AEIDATAFALFTKNQRQW--RAAPLTTQTIDE------FKAACEKYHYTSAQILPHDSYL 73 ++ T A+FT+ A + I+ FK ++ T +I H + Sbjct: 1 MKLGFTTLAMFTRPNNDIIETAKKYEFEMIEILGEGPFFKNDNLEFANTDLEIYMHAPTV 60 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS--EEDCLARIAESI 130 +N+ T ++S D + +++ + L HPG + L ESI Sbjct: 61 DLNISSLNTGIRKESVKQMKDALDYGKKINATALTIHPGQIGRNEDRIRKYALELAIESI 120 Query: 131 NIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 +D + V +V EN + S LG K E L + +++++ G+ ID H Sbjct: 121 GELVDYSDIVVSV-ENMPERFSFLGNKVEEL----ERIQNETGCGLTIDVGHG------- 168 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 T CE+ K + HLND D+H +LGEG + + + + Sbjct: 169 NTCGNCEEFLD-------LKNISYCHLNDNNGV----KDQHITLGEGTLDLNLLKKV 214 >UniRef50_Q59009 Uncharacterized protein MJ1614 n=6 Tax=Methanococcales RepID=Y1614_METJA Length = 251 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 24/175 (13%) Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 +NL + S D D ++ ++ L+ HPG + + E L + +S+N Sbjct: 66 LNLSSYRERIRKVSLDFVRDVLEVAIKVDAKLIVLHPGYCVFKYDYEKALNSLIKSLNDL 125 Query: 134 --LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 + + GV IEN + + II+ + + + + +D H+F Sbjct: 126 NNIQEEFGVQITIENMPSYDMFMFRNPD--KEIIENLGE---LKITLDIGHSF------- 173 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRW 246 K +F + + +H++D F D H +G+G I + F+ Sbjct: 174 ----LNKNIENFLKI--SDKIAHIHIHDNNGEF----DEHLCIGKGKINFNNFKK 218 >UniRef50_Q57597 Uncharacterized protein MJ0133 n=12 Tax=Methanococcales RepID=Y133_METJA Length = 273 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 15/214 (7%) Query: 57 EKYHYTSAQIL--PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 +K I+ H + INL E +E S I + G L FHPG +L Sbjct: 52 KKLKEYGEDIIFSAHAPHYINLNANEEEKVENSIRRIIKTAKVLNNCG-KNLVFHPGYYL 110 Query: 115 MQISEEDCLARIAESINIALDKTQGVTA---VIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 + S+E RI +I LDK + + + T G+ + G E L + Sbjct: 111 -KRSKEVTYNRIKSNIQRILDKLEALNLNVMLRPETTGKTTQFGDIDETLKLCFEL---- 165 Query: 172 SRVGVCIDTCHAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD- 229 + CID H +A + K +G + ++ MH++ + +G + Sbjct: 166 -NILPCIDFSHIYARSRGVINDYNSFYKILEKVENVLGKEAIKDMHIHLSGIEYGKGGER 224 Query: 230 RHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI 263 RH L E N + ++D G +I E+ Sbjct: 225 RHLPLNESNFNYRDVLKALKDFDASGT-VICESP 257 >UniRef50_Q214G7 Endonuclease IV n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q214G7_RHOPB Length = 315 Score = 81.0 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 70/205 (34%), Gaps = 19/205 (9%) Query: 37 RQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQ 96 + +T + F+ E + H SY I + +S D + Sbjct: 41 QMTYGPRMTAENCVLFRQMSEATGVRLS---VHASYFIVFTSDDPAKILQSEDTLKRTYE 97 Query: 97 RCEQLGLSLLNFHPGSHLMQISEEDCLARIAE----SINIALDKTQGVTAVIENTAGQGS 152 E+LG + HPG L S + L R E +N G+ TAG+ Sbjct: 98 AAERLGARTIVLHPG-PLYGASGSEPLERFVENTGNCLNSIGRTDIGLFV---ETAGKVG 153 Query: 153 NLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA--AGYDLRTPAECEKTFADFARTVGFK 210 LG + + I ++ CID H A G L PA + + + + Sbjct: 154 QLG-SVDEILEICTRLDGTFP---CIDFGHVHARTLG-TLEDPAAVDAIASQLELYLQSR 208 Query: 211 YLRGMHLNDAKSTFGSRVD-RHHSL 234 +H + FG R + +H ++ Sbjct: 209 DNLRIHFHYTPIHFGQRGEIQHRAI 233 >UniRef50_B6YWM5 Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWM5_THEON Length = 250 Score = 80.6 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 83/232 (35%), Gaps = 32/232 (13%) Query: 52 FKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP 110 F E Y +I H + IN+G + + + + ++ ++ ++ HP Sbjct: 45 FAEIVEGYRM---KITVHAPFSDINIGAFNEKIRRAALEVLRETIEVAAEMNALVVTIHP 101 Query: 111 G--SHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIID 166 G S L +E L +S+ ++ G+ +EN E LA ++ Sbjct: 102 GHRSPLSIKHQEKYLEIHRKSLRKIAAWSEEFGIKVGLENMPSFPILDAQSCERLAELVG 161 Query: 167 GVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS 226 ++ +GV +D H T ++ + +HL+D + Sbjct: 162 DID----IGVTLDVGHLN------TTTRNFDRFIQLLE-----NRIVHLHLHDNRGD--- 203 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H LGEG + + ++ + + LE + + + +L++ Sbjct: 204 -KDEHLPLGEGTV---PWAQVI--PKLPKVTWSLEVGGIESARKSLEFLRSL 249 >UniRef50_Q3Z9G2 AP endonuclease, family 2 protein n=5 Tax=Dehalococcoides RepID=Q3Z9G2_DEHE1 Length = 276 Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 20/260 (7%) Query: 15 ANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 N R AE+ + F R T + ++ H Y Sbjct: 21 QNGIHRVAELGLDGMEIEFV---RGVYMKAPDTNPVRILSELLR------IKLSAHAPYY 71 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 +N ++ S+ + G L FHPG +L S I ++I Sbjct: 72 LNFNAVEENKVKMSQHLLYQSAKTASLCGAGSLVFHPGFYLTD-SPSAAYEAIRDNIRPV 130 Query: 134 LDKTQG---VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 ++ Q ++ +G+ + G L + + + ID H A Sbjct: 131 AERLQKEGFPISLRPEVSGKVTQFG----DLKETMALCSEIPGLLPTIDFSHYHARTGKF 186 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHDAFRWIMQ 249 + +E A +G L+ MH++ + + R +R H +L E + + ++ Sbjct: 187 NSYSEFSFMLTTMADYLGESALKNMHIHISGIDYSPRGERQHLNLAESDFNYKELLLCLR 246 Query: 250 DDRFDGIPLILETINPDIWA 269 D G+ +I E+ N + A Sbjct: 247 DKGCAGL-VICESPNLEEDA 265 >UniRef50_Q0W7H9 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7H9_UNCMA Length = 251 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 71/246 (28%), Gaps = 45/246 (18%) Query: 20 RAAEIDATAFALFTKNQRQWRAAPLTTQ-----------------TIDEFKAACEKYHYT 62 R I + +LF K +W A T D + + Sbjct: 2 RTVRIGFSTLSLFWKTPPEWAEAARTDGFGSIEILCEGPQWPRQADKDTIRESIAGSGID 61 Query: 63 SAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H + +N E++ + +G S L HPG Sbjct: 62 ---LYLHSPTIDLNPASMNPGIREETLRQLRETADLAAAIGASCLTTHPGIVHKDKVRNV 118 Query: 122 CLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + + A D ++ GVT IEN L E L+ GV ID Sbjct: 119 GVEFAKQVLGEAADYARSAGVTLSIENMPASKQYLCNTPEELSDFRAHCG----CGVTID 174 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA AE ++ + +H+ND D+H GEG + Sbjct: 175 VGHA-------ILCAEPQEFLR-------MPEISYLHVNDNMGE----RDQHLCPGEGIL 216 Query: 240 GHDAFR 245 R Sbjct: 217 DLKMLR 222 >UniRef50_C4HXN1 Endonuclease IV n=2 Tax=cellular organisms RepID=C4HXN1_YERPE Length = 53 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 37/53 (69%), Positives = 44/53 (83%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFK 53 MK++GAHVSAAGG+ A IRA E++ATAFALFTKNQRQWRAAPL I++F Sbjct: 1 MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAEDVIEKFM 53 >UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoformans RepID=Q5K9B1_CRYNE Length = 492 Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 42/258 (16%) Query: 7 HVSAAGGLANAAIRAA-----EIDATAFALFTKNQRQWRAAPLTTQTI-----DEFKAAC 56 H+S +GGL + R + ++F + ++ + + D F A Sbjct: 214 HLSTSGGLTPSLKRISLPYYPYPKVKGVSMFINHPKRRVHEQIRVKEDVKNGQDIFTATM 273 Query: 57 EK--YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLN------- 107 + + + H Y +NL ++EM++ + LG+S L Sbjct: 274 DSVMDNDWRKTSMVHGVYTVNLLSEDH---------VMEEMRQVKALGMSTLVIQYVRLF 324 Query: 108 ----------FHPGSHLMQIS--EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLG 155 F GS + L R+ + QG+T +ENT + Sbjct: 325 YRISSLLFPPFSLGSAGKDDPSYKHVQLTRLVSDLREITRAVQGITLALENTVHPSPHSL 384 Query: 156 FKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGM 215 L I+ S++ +C+D H + +DL + + ++ + + T G + G+ Sbjct: 385 TTLSSLCTILTHFP-PSQLKLCLDLSHLHVSEFDLNSESGRKEMW-ELLETAGKARVVGV 442 Query: 216 HLNDAKSTFGSRVDRHHS 233 H++D G + DRH + Sbjct: 443 HVSDNYVAHGGKGDRHAN 460 >UniRef50_Q0W054 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W054_UNCMA Length = 265 Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 39/216 (18%) Query: 63 SAQILPHDS------YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 I+ H +++ G ++ + + +L L+ HPG + Sbjct: 43 DGPIIVHAPEKFGDGTILDAGSEDEVQRTRATEMLKRTIDISVRLQAELVIIHPGGVFRE 102 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKF---------EHLAAIIDG 167 I + V V+EN G G + + A++D Sbjct: 103 HRTVSPERLIRTMAELKACAGNRVELVLENMPGYYRT-GGTLWHPCLLTGADEIVAVLDR 161 Query: 168 VEDKSRVGVCIDTCHA----FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + VG+C+D CHA +G+D + +T Y R +H++DA Sbjct: 162 TD----VGLCLDVCHAKLYCNVSGHDFKQ---YIETL--------LPYARHLHVSDAMGE 206 Query: 224 FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLI 259 G + +GEG I + + +D +P I Sbjct: 207 AGEGL----QIGEGEIDWEWLASVTRDLDLVAVPEI 238 >UniRef50_B8FPG2 Xylose isomerase domain protein TIM barrel n=9 Tax=Clostridiales RepID=B8FPG2_DESHD Length = 273 Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 75/212 (35%), Gaps = 11/212 (5%) Query: 54 AACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 A E + H S+ INL +S ID + ++G L FHPG + Sbjct: 54 AILEAKQKEGFYLSAHASHYINLNSNDIAKQNQSITRIIDAAKGLAKVGGRSLVFHPGFY 113 Query: 114 LMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + ++E A I ++ T G+GS G E L A+ V Sbjct: 114 M-SDAKEAAYATIKSNLMRLSSCGIDYRL---ETTGKGSQFG-TLEELVALCQEVPLCK- 167 Query: 174 VGVCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-H 231 +C+D H A + L+ + +G L +H++ + + +R H Sbjct: 168 --LCLDFAHIHARSNGGLKNYDDFAGVLKYVLDHLGRTALEDLHIHMGGIRYTVKGERSH 225 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILETI 263 L E + + ++D G +I E Sbjct: 226 APLLESDFNYQECLRAIKDYDVRGC-IIAEGP 256 >UniRef50_A3CT33 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CT33_METMJ Length = 244 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 73/239 (30%), Gaps = 35/239 (14%) Query: 46 TQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLS 104 + F+ C + H IN+ + +D C+++G Sbjct: 37 PHNLFRFEEVCRSFDLRYT---VHAPVADINIASENERLRRAAVRVLLDLAAVCDRIGAE 93 Query: 105 LLNFHPGSHLMQISE---EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHL 161 L HPG + + L R + + A+ + V +EN E L Sbjct: 94 RLVVHPGHVWGEEMRVVAQAALDRSLDDL-AAVQQEVNVRFAVENMGAWEICFFRSPEFL 152 Query: 162 AAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 + + +G +D HA G A + +HL+D + Sbjct: 153 DRLANR-----NLGFALDVGHAHTNG----NLASFLEQGTAIH----------VHLHDNR 193 Query: 222 STFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 D H + G+GNI D R + G+ ++E + + LK Sbjct: 194 G----SRDDHLACGDGNI--DLCRVMAALP--PGVTKVVEPNTFQDYERSLEHLKGLSP 244 >UniRef50_C4G2Z7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2Z7_ABIDE Length = 289 Score = 76.8 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 92/252 (36%), Gaps = 34/252 (13%) Query: 43 PLTTQTIDEFKAACEKYHYTSAQILPHDS----YLINLGHPVTEALEKSRDAFIDEMQRC 98 P + +K +++ + Y + P +++ D F M+ Sbjct: 59 PFIEDARQKLNEMKQKMKNNGQKVVVYTPETLAYPYSFSSPDEAVRKRTVDYFAMAMEDA 118 Query: 99 EQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGF 156 LG L + G L+ E+ + ++ L + +G+ ++E SNL Sbjct: 119 LYLGTDKLFINSGCGLLDHFREESFGYLIDTFKRIAKLAEEKGIKLLLEQLQPYESNLVV 178 Query: 157 KFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMH 216 + + ++ V + VC+D AG ++ ++ +G ++ +H Sbjct: 179 NLQDVKRVLQEVNSPN-FYVCVDVVAMAVAG----------ESLKEYFEELGRDRIQLIH 227 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGI-------PLILETINPDIWA 269 D+ H+ LG+G + + + +++ +DG+ + E + I A Sbjct: 228 FADSC---------HYILGDGELPLEKYLKTLEEYEYDGLIDLEINDSIYWENPHESI-A 277 Query: 270 EEIAWLKAQQTE 281 + WL+ ++ Sbjct: 278 RSVQWLENYFSK 289 >UniRef50_A5UMG1 Sugar phosphate isomerase/epimerase, AP endonuclease family 2 n=2 Tax=Methanobrevibacter smithii RepID=A5UMG1_METS3 Length = 248 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 30/218 (13%) Query: 68 PHDSYLINL--GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HLMQISEEDCL 123 H +INL + S + ++ ++ HPGS L + ++ Sbjct: 55 VHSP-IINLNIASLTENIRQASIAEIKKSIDLANEIDAEIVVVHPGSIPFLGRDFKDKIF 113 Query: 124 ARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 +SI + + GV A IEN + L ++ ++ + +D Sbjct: 114 ELNKQSIEEIGEYGKELGVNAAIENMPTFEGYMYSNPYELNELVTSLDMS----MTLDIG 169 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HA AGY P + F ++ +H +D D H++LG+G+I Sbjct: 170 HANHAGYG---PEDMY-----------FDSIKHIHAHDNNGD----DDSHYALGDGSIDL 211 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + +D ++DG I+E D + +LK Sbjct: 212 KSIISTFEDKKYDGT-YIIEVNEKDWVKKSYNYLKNNF 248 >UniRef50_Q2NGK4 Predicted sugar phosphate isomerase/epimerase or endonuclease n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NGK4_METST Length = 252 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 33/239 (13%) Query: 43 PLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQL 101 P D F E Y + H +N+ V + + S + +D + Sbjct: 37 PYDEVGADVF----ESYDLGLS---IHAPMSDVNIASHVKKIRDISVELMVDSFKLANDW 89 Query: 102 GLSLLNFHPGSHLMQISE--EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFK 157 G + HPG+ + + E L ES+ Q GV +EN L Sbjct: 90 GAERVVVHPGTIPIMALKYPEKILKYNVESLIKCQRAAQEYGVMMCVENMPLFERMLYTN 149 Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHL 217 + A+ D V+++ G+ +D HA G+ E F + +HL Sbjct: 150 VD---ALFDLVDNEIHSGITLDVGHAHNNGF------APENMFKS-------DNIHHIHL 193 Query: 218 NDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 +D ++ D HH+LG NI I++ ++D I ++E + I +LK Sbjct: 194 SDNDGSY----DMHHALGSHNIDFPKIFDILKQKKYDDI-CVIEVRTLQGILKSIDYLK 247 >UniRef50_D1YXC1 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YXC1_METPS Length = 602 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 92/283 (32%), Gaps = 35/283 (12%) Query: 6 AHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ 65 +H + + + + LF K E T+ Sbjct: 6 SHRIQSESDVRSIQSLEDNGFSCCELF--------FPEREPLDAQTLKLIDEVSGTTNLL 57 Query: 66 ILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDC 122 + H + IN+ + S D ++ + ++ H G S + E Sbjct: 58 LTAHLPFKNINIASVYQYVKDSSVDMLAGMIESLSDY-VRMVTIHTGYASPSVSGGLEKA 116 Query: 123 LARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + S+ D+ + +EN + +G F + II GV ++ VG+ D Sbjct: 117 IESNVLSLAKICDRAGQYDIMVGVENAMNEKYMVGRNFAEMERIIKGV-NRGNVGLTFDV 175 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 HA G RT +Y+ +H +D FG D H +LG G I Sbjct: 176 GHARLTG----------NIEDYLDRT---EYIVEVHAHD---NFG-YTDEHLALGHGKIN 218 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKA 283 ++D P +LE + E I + ++ +E + Sbjct: 219 WGYVYDKVKD---LNCPFVLEQKTVEEGLESIKYWQSLSSESS 258 >UniRef50_A2ST75 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST75_METLZ Length = 256 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 31/249 (12%) Query: 38 QWRAAP---LTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFID 93 W + + F A + H + +N E++ F Sbjct: 28 GWEISADGNYRLDKPETFSAVKRVIDENGLDVSVHAPFSDLNPASINMPIWEETVRQFTV 87 Query: 94 EMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAG 149 +++ +L + HPG S + + E ++ + Q G+TA +EN Sbjct: 88 CIEQAAEL-TDTVVLHPGYLSPVSRFDEASAWNNHKQACIRLGETAQRVGITACLENMPN 146 Query: 150 QGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGF 209 +DGV +G+ +D HA G +F + + Sbjct: 147 LDDFFCRDPYEQEGFVDGVPG---MGLVLDIGHANTTGN-----------LDEFCKII-L 191 Query: 210 KYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR-WIMQDDRFDGIPLILETINPDIW 268 +H++D + D H LG G I D I+ + G +++E NP Sbjct: 192 PKAHHLHIHDNHG----KYDEHLPLGGGTINWDKIMPRIV--KEYKGKIIVVEGRNPKEG 245 Query: 269 AEEIAWLKA 277 + + +L+ Sbjct: 246 KKSLEFLRK 254 >UniRef50_Q5NVW6 Predicted sugar phosphate isomerase / epimerase n=3 Tax=Archaea RepID=Q5NVW6_9ARCH Length = 259 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 27/201 (13%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLG 102 +T +T+ E K+ + I H + ++L ++ ++ Sbjct: 40 ITPETLPEIKSIINTTNLR---ITVHGPFSQLDLASLHEPLWNETIRQIRQCVELSADF- 95 Query: 103 LSLLNFHPG--SHLMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKF 158 + HPG S L + ++ R E++ I + V +EN L Sbjct: 96 TDTVVVHPGILSPLGREMKDKAWERNVEALKILARHAEEHRVKLCLENMPDMEKLLCRTP 155 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN 218 + L +++ V +G +D HA T + + + +H++ Sbjct: 156 DELFGMVETVGSDG-LGTTLDVGHA-------NTTKNIPAFLRE------VRRINHIHIH 201 Query: 219 DAKSTFGSRVDRHHSLGEGNI 239 D K D H ++GEG + Sbjct: 202 DNKG----TSDEHLAVGEGTV 218 >UniRef50_A3CX04 Xylose isomerase domain protein TIM barrel n=2 Tax=Methanomicrobiales RepID=A3CX04_METMJ Length = 274 Score = 73.3 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 73/222 (32%), Gaps = 36/222 (16%) Query: 22 AEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPV 80 AE + + W + + C H + I H L +N Sbjct: 24 AESGLDGLEFWVETPHFWLR---DRPEDELGR--CIADHPELSPITVHAPSLDLNPCSIN 78 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--------SHLMQISEEDCLARIAESINI 132 E S D ++ ++ E++G +++ HPG S ED +AR+ E+ Sbjct: 79 PRVAEISVDYALEAVRMAERMGAAVVTVHPGKRTAKRHPSAYDYRRFEDYIARLREA--- 135 Query: 133 ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 + V IEN + + L E A ++D + +D HA Sbjct: 136 --AEGTRVKVAIENMEPRVNTLLSTAEDAAEVLDREPW---LWFTLDMGHA--------M 182 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 C++ + + + +H+ S G HH + Sbjct: 183 MTSCDEVIRFIDLCI--ERMVNVHV----SALGGNGRPHHPI 218 >UniRef50_A8TE27 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8TE27_METVO Length = 289 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 18/206 (8%) Query: 58 KYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HL 114 K + + H + +N + + + D+ I+ + + ++ HPG +L Sbjct: 69 KKCQKGLETVVHAPFTDLNPASLNDKVSKVTVDSIIEAIDFASKTNSKIVTVHPGYIPYL 128 Query: 115 MQISEEDCLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 + +E + R + SI ++ +T +T +EN LG E L + G++ S Sbjct: 129 WKDYKERVIERNSNSIKKLVEVAETYDITIGLENMPNFFGVLGTTPEELELLTKGIDSNS 188 Query: 173 RVGVCIDTCHAFAAGYDLR--TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR 230 +G+ D HA +L + + + + + +H ND D Sbjct: 189 -LGITFDIGHANTC-KELSNLNTEDYIAELNNIGKGIVHTH---IHDNDGTD------DS 237 Query: 231 HHSLGEGNIGHDAFRWIMQDDRFDGI 256 H L EGNI +A + D ++GI Sbjct: 238 HLKLKEGNINLEAVFTNLNDINYNGI 263 >UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 Tax=Bacteria RepID=B9M9L1_GEOSF Length = 259 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 107/289 (37%), Gaps = 36/289 (12%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGA + + + AE+ L + +D + ++ Sbjct: 1 MMRIGAMNHPQHRVEDEILWMAEMGLDFIDLTLEPPAAGHW----QVDVDSMRELLQETG 56 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG----SHLMQ 116 ++ H +Y + LGHP E E + +AF +Q +LG +N HP H Sbjct: 57 LG---VIGHTAYYLPLGHPFEEVREGAVEAFSSTLQILARLGACCMNIHPDFKAPMHDAA 113 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 S E L I E + +A + + +IEN G +++ L ++ + + +G+ Sbjct: 114 FSVEQNLKSIRELLPLA--RRLDMELMIENLPGNVNDVP----QLGHFLEAIPE---LGL 164 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 +D H T + G +R +HL+D + D H LG Sbjct: 165 HLDIGHT--------NLQVRHNTTSSIMEHYG-HRVRHVHLHDNRG----TDDLHLPLGA 211 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILE--TINPDIWAEEIAWLKAQQTEKA 283 G + ++ ++ +DG + LE T + ++ L+ E A Sbjct: 212 GTLDLESCIRSLKAAGYDGT-ITLEVFTPDRELLRFSADKLRRVWNEVA 259 >UniRef50_Q58587 Uncharacterized protein MJ1188 n=5 Tax=Methanocaldococcus RepID=Y1188_METJA Length = 270 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 91/273 (33%), Gaps = 45/273 (16%) Query: 22 AEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPV 80 +I F +N W I + + + + H+ ++ +N Sbjct: 24 RDIGIKCMEFFPENPDFWDNR-FDLDYIADLRK-----EFLKFDVALHNPHIELNPSSLN 77 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE-EDCLARIAESINIALDKT-- 137 E + ++ + L+ HPG S ++ + ++ L+ Sbjct: 78 PYVREAVIKETLWSIELAKFYRCKLITIHPGKRPTNRSPTDEEYEAFFKYLDRTLEVAIN 137 Query: 138 QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECE 197 + +T +EN + + +G+ E + I+ + + +D HA + Sbjct: 138 KNITICVENMPERINRIGWSPEEMEWILK--RYDELLYMTLDFAHA-------------K 182 Query: 198 KTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA-------------F 244 + +F +V Y++ H+ S +R D H L + I F Sbjct: 183 EYMEEFLESV-IDYIKHTHI----SGVVNRKD-HFPLRKSEIDFSPYIKALLDYGYNGMF 236 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 + D R + P+ E + ++I +L++ Sbjct: 237 NLELDDRRLEKNPVTKE-EKIEEVIKDIEFLES 268 >UniRef50_Q39ZU4 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q39ZU4_PELCD Length = 257 Score = 72.5 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 26/223 (11%) Query: 33 TKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAF 91 + + ++ L + K A ++ + H ++ +N G E +R + Sbjct: 26 LQPELAFKWPDLDPSLLPAVKRAGQQLAEEGLGVTVHAPFMDLNPGAIEPLVREATRQRW 85 Query: 92 IDEMQRCEQLGLSLLNFHPGSHLMQISEEDC--LARIAESINIALD--KTQGVTAVIENT 147 + ++ E L L+ HPG + + + + + L+ +Q V+EN Sbjct: 86 MQTLEVAELLQARLVVLHPGFDRWRYGGQSQPWIDACLDFLPPLLEQAASQECLLVLENI 145 Query: 148 AGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTV 207 + + LAA++ ++ +G C D H ++L E+ F A Sbjct: 146 FEE------TPDTLAAVLKTLDSPW-LGHCFDAGH-----WNLFAKCSMEQWFEALA--- 190 Query: 208 GFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQD 250 ++R +H++D D H ++GEGNI M++ Sbjct: 191 --PWIRHLHIHDNSGD----RDAHLAIGEGNIDFPLLFDYMKN 227 >UniRef50_A3CVT4 Xylose isomerase domain protein TIM barrel n=4 Tax=Methanomicrobiales RepID=A3CVT4_METMJ Length = 257 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 79/239 (33%), Gaps = 28/239 (11%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLG 102 + F A E T H Y +NL +S +Q +L Sbjct: 39 YRLDNPENFAAVRENLESTGLLATVHAPYSDLNLASLNYPIWRESIRQTCCCIQHAAEL- 97 Query: 103 LSLLNFHPG--SHLMQISEEDCLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKF 158 + HPG S + ++ E ++ + GV A +EN L Sbjct: 98 TDRVTVHPGFVSPIGKLVPEKVWEMQKTALVEIGKCAEDHGVLACVENMISIKDFLCRYP 157 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN 218 E + + +G+ +G+ +D HA T + + +H++ Sbjct: 158 EEILGLTEGIAG---IGITLDVGHA-------NTNGLVDAFLTHVTE------VDHLHIH 201 Query: 219 DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 D + D H +LG+G I + ++ R P+++E N + +A + Sbjct: 202 DNHG----QSDEHLALGDGTIAWEKVGRVI--ARDYSGPVVIEGRNLEEAKRSLAAFRK 254 >UniRef50_A8TFI1 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8TFI1_METVO Length = 254 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 64/180 (35%), Gaps = 23/180 (12%) Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 +NL + + + ++ + ++ HPG ++ + +++ Sbjct: 63 MNLASKYENLRKVNVNIIEQLVKIADNTNAKVIVLHPGYNVFDSMRPKAVESFLKTVEDM 122 Query: 134 --LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 L + V IEN L + ++ ++ +G+ D H++ Sbjct: 123 NKLQQEHSVQLTIENMPNYDMMLFKTPD-----MNVIDSFGDIGITFDMGHSY------- 170 Query: 192 TPAECEKTFADF-ARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQD 250 +F F ++ +H++D F D H +LG+G I + ++ ++D Sbjct: 171 ----LNNNIDEFLREKKVFNRIKHVHIHDNNGDF----DEHLNLGDGKIPFENYKKALKD 222 >UniRef50_A5UTA1 Xylose isomerase domain protein TIM barrel n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTA1_ROSS1 Length = 255 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 27/198 (13%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGL 103 L + E +A + ++ H ++ + PV + + + +G Sbjct: 39 LDSFDPAELRAILDAAGMR---VVGHTAWYLPFASPVERVRRAAVEEVAASLPVFAAIGA 95 Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHL 161 L+N H + +D L R S L + G+ V+E + + L Sbjct: 96 HLVNVHISRGVSLYGNDDELKRNGASFAELAHLAEPYGIQIVVE-------HPPSRRFGL 148 Query: 162 AAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 I ++ R+G+ +D HAF AG DL +G R H++ + Sbjct: 149 TEICTILDADPRLGLHLDVGHAFVAGIDL----------EQLIDRLGS---RLWHVHFS- 194 Query: 222 STFGSRVDRHHSLGEGNI 239 G + D H +G G I Sbjct: 195 DNRG-QEDDHMPIGAGKI 211 >UniRef50_C1F9P4 AP endonuclease, family 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9P4_ACIC5 Length = 302 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 87/271 (32%), Gaps = 47/271 (17%) Query: 13 GLANAAIRAAEIDATAF---ALFTKNQRQ--------WRAAPLTTQTIDEFKAACEKYHY 61 GL + RA F F RQ +R+ PL ++ + + Sbjct: 48 GLLDLVTRAGAQGVELFAARQHFDYTNRQEIRDLAEWFRSNPLEPFSMHAPLYSDREMGR 107 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +NL HP + D ++ EQ+ L ++ H G S Sbjct: 108 GGGPS-------VNLLHPEKSRRIDAMDEVKRALETAEQIPLRVMVVHLGDREDTWSPR- 159 Query: 122 CLARIAESIN--IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 L ++ A GV +EN + + + EH+ I+ +GVC+D Sbjct: 160 ALEYSLTALEHLRAFANPLGVKLAVENLQNEVT----RPEHIREIL-HTGHFKDIGVCLD 214 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T HA +T A +++R HL+D D H GEG I Sbjct: 215 TGHAHLG-------DGVSETIAQLR-----EFIRTAHLHDNHG----NKDEHLWPGEGEI 258 Query: 240 -GHDAFRWIMQDDRFD----GIPLILETINP 265 + + + + I LE N Sbjct: 259 AWDETMQELKSAPQTPAGVLEIHYALEEPNE 289 >UniRef50_A0RR50 AP endonuclease, family 2 n=3 Tax=Campylobacter fetus RepID=A0RR50_CAMFF Length = 247 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 81/229 (35%), Gaps = 27/229 (11%) Query: 41 AAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRC-- 98 + P + I + K+ A PH S ++ + + S + + E+ R Sbjct: 25 SVPNSLNKIKIWADLKLKFGIPFAIHAPHFSSGLDFSNKD----KFSSNLKLVELARAYS 80 Query: 99 EQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKF 158 +L FHPG + + ++ + +I + V + A +G F Sbjct: 81 LELDAIYTVFHPG---IGGNVDESIRQINSIKDFKFIIENKPYVVPMDNAPNAFCIGSTF 137 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAF-AAGYDLRTPAECEKTFADFARTVGFKYLRGMHL 217 E + IID G C+D HA +A Y + A F Y H+ Sbjct: 138 EMIKKIIDQTGH----GFCLDIGHALVSANYQ---KLGIYEYIAKFNSLNPLVY----HI 186 Query: 218 NDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPD 266 +D + S D H G+GNI I+ D+F I ETI Sbjct: 187 SD--NDSTSIYDAHLHFGDGNIDFKKIHSIIDKDKFLAI----ETIKDS 229 >UniRef50_A5G934 Xylose isomerase domain protein TIM barrel n=9 Tax=Desulfuromonadales RepID=A5G934_GEOUR Length = 257 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 34/196 (17%) Query: 62 TSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH--LMQIS 118 + H ++ +N G V + + + +F D + L ++ FHPG + Sbjct: 55 NGLKCTIHAPFMDLNPGSVVRQIRDITLQSFNDVLDAAAILRPEVIVFHPGYDRWRYGDN 114 Query: 119 EEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEH----LAAIIDGVEDKS 172 ++ L +S L++ + G +EN FE L A+++ V+ Sbjct: 115 KDAWLQYSIDSWQSVLERAERIGCIVAVENI----------FEEEPSTLQALLEAVDSP- 163 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 R C D H ++L E+ FA Y+ H++D FG D H Sbjct: 164 RFRHCFDVGH-----WNLFRKVGLEEWFATLG-----NYIAETHIHD---NFG-LRDEHA 209 Query: 233 SLGEGNIGHDAFRWIM 248 LGEGNI F +M Sbjct: 210 PLGEGNIDFPLFFTLM 225 >UniRef50_B5WBQ3 Xylose isomerase domain protein TIM barrel n=1 Tax=Burkholderia sp. H160 RepID=B5WBQ3_9BURK Length = 293 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 44/257 (17%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQI----LPHDSYL 73 +R E+ F L + + ++ + L H Sbjct: 28 VLRLGELGYREFELVLNPPH-LALEDFPSGARAKLRSTMAAAGLAVRSLNVPSLDH---- 82 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESIN 131 NL P+ S D F+D + LG + L PG S L A + ES++ Sbjct: 83 -NLASPMRRMRRYSVDLFLDAIDLAADLGATDLVVAPGRMSPLFPPVLTQREAWMRESLD 141 Query: 132 IALDKTQ--GVTAVIENTAGQGSNLGFKFEH---LAAIIDGVEDKSRVGVCIDTCHAFAA 186 L + Q GVT +EN F L A + +S +GVC D +A Sbjct: 142 ALLPRAQRRGVTLALENVPF------ASFPDAHTLGAFVRSYGSRS-LGVCYDVANAHFI 194 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD--RHHSLGEGNIGHDAF 244 G +PA+ + + +R +HL+D R D RH +G G++ Sbjct: 195 G---ESPADGLRALREL--------VRVVHLSDT------RRDAWRHDEVGLGDVPFAQV 237 Query: 245 RWIMQDDRFDGIPLILE 261 + D RF+G +LE Sbjct: 238 HNALTDIRFEGT-CMLE 253 >UniRef50_A7I9J6 Xylose isomerase domain protein TIM barrel n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I9J6_METB6 Length = 275 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 93/279 (33%), Gaps = 47/279 (16%) Query: 6 AHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ 65 +HVS AG + + W + T + AAC + H A Sbjct: 21 SHVSRAG-------------LDGIEYWLETPYFWLSRLPTGE-----VAACRQAHPEIAT 62 Query: 66 ILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLA 124 H L +N + E S + + +LG LL HPG + D Sbjct: 63 FTVHTPVLDLNPCSINPDVAEVSVAWAVRSLALARELGAGLLTVHPGRRTAKRPPGDADQ 122 Query: 125 RIAESINIALDKT---QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + L + VT +EN + L E + ++D + +DT Sbjct: 123 IRFDHYLAVLKEAARKSTVTVAMENMEPAVNALICTPERMREVLDAEPW---LKFTLDTS 179 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HA + E+T +++ G L +HL +++ + H L E + Sbjct: 180 HALVS---------SEETVSEYIDLCG-DRLANVHL--SRA---AGGRLHLPLEESPV-M 223 Query: 242 DAFRWIMQDDRFDGIPLILET-----INPDIWAEEIAWL 275 ++D + G PL+LE P E+ A L Sbjct: 224 ARILGFLRDHHYLG-PLMLEIDDLNFPRPFSHEEKCAVL 261 >UniRef50_B8H746 Xylose isomerase domain protein TIM barrel n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H746_ARTCA Length = 270 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 88/269 (32%), Gaps = 37/269 (13%) Query: 16 NAAIRAAEIDATAFALF---TKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 A AE+ A + F + W +T Q +A + Y + Y Sbjct: 13 TAIDAIAELAANGYQAFEVPVSSPHCW-PDEITAQERSAMRARLKDYGAKIRSLNA-GGY 70 Query: 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI----AE 128 INL P KS + + E + + PG + L + E Sbjct: 71 DINLASPGANMRRKSVEHIKQVIDLAEAWDVREVVISPG--TRRPMISPALDNVYAWMYE 128 Query: 129 SINIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 S+ + K G + ENT + LA +I + D + V + D +A Sbjct: 129 SLETLIPMAKQAGTRLLFENTP---YCFTPTIQDLAGVISTINDDA-VKIVYDVANAAYI 184 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST-FGSRVDRHHSLGEGNIGHDAFR 245 G + ++G +H++D + +G H +G G I + Sbjct: 185 G------EDPVDGLLAHHESIGL-----IHISDTGTETWG-----HDPIGTGIIDWNGLG 228 Query: 246 WIMQDDRFDGI-PLILETINPDIWAEEIA 273 ++ GI ++LE I + +E Sbjct: 229 KAVR--ETCGIGNVVLEIIREENPVQEFK 255 >UniRef50_Q89P16 Blr3667 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89P16_BRAJA Length = 276 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 97/295 (32%), Gaps = 46/295 (15%) Query: 1 MKYIGAHVSAAGGLA------NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKA 54 + +GAH G A +A R A L + +A Sbjct: 3 LPVLGAHTF---GFAWDCVAEDAIERLAAAGYRTIQLMATPPH-FDPWVQDAARTRRIRA 58 Query: 55 ACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 E++ + + S INL P ++ + +++ + R +LG + GS Sbjct: 59 LIERHCLSLLALDL-ASSDINLASPSQHVVDFAVSSYVATIDRAAELGARWICV--GSGR 115 Query: 115 MQISEEDCLARIAESINIALDKTQ------GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 R+ S A + GV ++EN + A I + Sbjct: 116 RHALLAKANDRLMVSFRDAFARIYDKAERAGVPVILEN------HPQGLLASAADITRFL 169 Query: 169 EDKSRVG--VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS 226 + + G V D +A A G D + L +HL+D+ G Sbjct: 170 DAEGYAGMPVIYDVANAVAIGED--PVEGLRALW---------PRLGIVHLSDS--PKGQ 216 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWA---EEIAWLKAQ 278 RH +G G I A +++ ++G ++LE ++ E A LK Q Sbjct: 217 W--RHDPIGSGEIDFAAIAALLRQRAYEGR-IVLEILSDQPLKDIDEGAAILKRQ 268 >UniRef50_UPI000190C7DE endonuclease IV n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190C7DE Length = 55 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 36/42 (85%), Positives = 38/42 (90%) Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 F WIMQD RFDGIPLILETINPDIWAEEIAWLKAQQ +A+A Sbjct: 14 FVWIMQDARFDGIPLILETINPDIWAEEIAWLKAQQIAEAMA 55 >UniRef50_B8IW61 Xylose isomerase domain protein TIM barrel n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW61_METNO Length = 278 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 74/209 (35%), Gaps = 31/209 (14%) Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINI 132 NL S F D + LG+ L PG S L + A + ESI Sbjct: 77 NLASSTPRVRAASVQMFRDAIDLASDLGIGWLVTVPGRMSPLFPPGISERTAWMRESIEA 136 Query: 133 AL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDTCHAFAAGY 188 L + +GV +EN F A++ D V +V C D +A G Sbjct: 137 LLPHAEARGVGLAVENIPI------AAFPDAASLGDFVRSFASPKVAACYDAANAHFIG- 189 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 + + LR +HL+D G V RH +G G + + Sbjct: 190 -----EDPVAGMHSLSDC-----LRILHLSDT----GRTVWRHDPVGTGTVPFAEVARAV 235 Query: 249 QDDRFDGIPLILETINPDIWAEEIAWLKA 277 F G P +LE I+P+ E A L++ Sbjct: 236 TSINFTG-PCMLEIIDPEP---EAAILRS 260 >UniRef50_A7IGY1 Xylose isomerase domain protein TIM barrel n=2 Tax=Xanthobacteraceae RepID=A7IGY1_XANP2 Length = 307 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 70/214 (32%), Gaps = 35/214 (16%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQR-CEQLGLSLLNF 108 D H INL P +A +D M LG L Sbjct: 60 DRLDRLVRMTGNRPFGYTVHGPLAINLMSPKARLPR--HEALLDAMIAISGALGAVNLVL 117 Query: 109 HPGSHLMQISEEDCLARIAESINIALDKT--QGVTAVIENT----AGQGSNLGFKFEHLA 162 H G + +R +++ A DK GVT +EN + + L + LA Sbjct: 118 HTGCVRGDDDVDVAYSRQRDALARAGDKAGEAGVTLCVENIFRFEPMRETALPSR---LA 174 Query: 163 AIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDA-- 220 A +D ++ V +D HAF LRT + + F R +H++D+ Sbjct: 175 AELDALDHPH-VRATLDVSHAF-----LRTTEARVDFLNEISALAPFA--RHVHVHDSFG 226 Query: 221 ------------KSTFGSRVDRHHSLGEGNIGHD 242 + G D H +G G I D Sbjct: 227 RPLESWTMDEAERLALGEG-DLHLPVGWGAIKWD 259 >UniRef50_A5IJZ8 Xylose isomerase domain protein TIM barrel n=4 Tax=Thermotogaceae RepID=A5IJZ8_THEP1 Length = 304 Score = 67.5 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 56/254 (22%) Query: 47 QTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKS----RDAFIDEMQRCEQLG 102 + ++ K Y++ H +INL K+ ++ ++ Sbjct: 54 KRLERVKELLSNYNFRYT---VHAPDVINL-------KIKTNPWHYQVMEATIEFAGEIN 103 Query: 103 LSLLNFHPGSHLMQISEEDCLARIAE--SINIA--LDKTQGVTAVIENTAGQGSNLGFKF 158 ++ +H G I + + R E ++ L K +GV +EN +G Sbjct: 104 AEVVVYHYGEVDHSIDVPERVQRKTEIVALRELADLAKEKGVVIGVEN-------VGHPV 156 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN 218 + ++ V + V + ID H F + + + + + G Y +HL+ Sbjct: 157 SEVLKLVRAVNHPN-VKLVIDVGHLF-----IVSNYTGIDFYDELKK--GLPYAVELHLS 208 Query: 219 DAKSTFGSR-------------------VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLI 259 D FG D H +GEG+I ++ I+++ FDGI +I Sbjct: 209 D---NFGESPQTYQKIPDVEAFRFVYGIGDLHLPIGEGDIPYNKVFRIIRESGFDGI-VI 264 Query: 260 LETINPDIWAEEIA 273 LE + D +A+E A Sbjct: 265 LEINSMDRFADEYA 278 >UniRef50_Q0W8Q0 Predicted endonuclease/nucleotidyltransferase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8Q0_UNCMA Length = 601 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 92/285 (32%), Gaps = 34/285 (11%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MK +H + + T LF + E Sbjct: 1 MKLSFSHKLQSESDVRSIQSMEGHGFTCVELF--------FPERESLDEQTLNMIDEVSA 52 Query: 61 YTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG-SHLMQIS 118 T+ + H Y +N+ E S D + + + ++ H G + S Sbjct: 53 TTNLYLTAHLPYKNLNIASIYQYVRESSTDLLVSIIDDLSDY-IDIVTLHTGYAQFGSGS 111 Query: 119 EEDCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + + S+ D+ + +EN + +G F + AI+ GV D+ +G+ Sbjct: 112 LDRAIENNILSLAKICDRAGQNDIMVGVENAMNERHMVGKTFREMEAILKGV-DRGNLGI 170 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 D HA G + +Y+ +H +D FG D H +GE Sbjct: 171 TFDVGHAQLTG----NIEDYLSR---------KEYILEVHAHD---NFG-YTDEHLPIGE 213 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G + + + + PL+LE + + +L++ E Sbjct: 214 GKV---NWNRVYETVNAWDCPLVLEQRTFEEGLRSVKYLQSLSAE 255 >UniRef50_D1Z0C2 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0C2_METPS Length = 268 Score = 67.1 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 31/213 (14%) Query: 63 SAQILPHDS------YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 ++ H L++L P + + +G + HPG + Sbjct: 43 DGPVVLHMPEKFADGSLVDLASPEEGKRRDAVAILKRTIDLGAAMGAESIICHPGGIRAK 102 Query: 117 ISEEDCLARIAESINIALDKTQGVT-AVIENTAG--------QGSNLGFKFEHLAAIIDG 167 D + +S++ + +G T ++EN S L + ++ I+D Sbjct: 103 PEFVDQCPLL-DSMHELIAYVRGTTRLLLENMPDIYWYKGVLHSSCLFKHKDEISTILDE 161 Query: 168 VEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 + +G+C+D CH A Y + Y+R +H++DA+ + Sbjct: 162 LS----LGLCMDLCH--AKLYCNSMGEDYLSYVTALK-----PYIRHIHVSDARGSTEEG 210 Query: 228 VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLIL 260 V +G+G + A R ++ D +P IL Sbjct: 211 V----QIGDGEVDFAALRKLLGDVGAAAVPEIL 239 >UniRef50_Q315E0 AP endonuclease, family 2 n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315E0_DESDG Length = 278 Score = 67.1 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 29/190 (15%) Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP----GSHLMQISEEDC 122 H + ++ G LE SR G LL HP G H + E Sbjct: 62 VHLPFFDLHPGSLNNAVLEASRATLYRAAGLARLYGPCLLVGHPAYDRGQHPPRHDEW-- 119 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV----EDKSRVGVCI 178 L R AE+ + +ENT ++ E LAA+ID + + G+C Sbjct: 120 LRRSAETWRTVREHAAMAPLRLENT----HDI--SPEPLAALIDELTAKGGEDGGAGICF 173 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 D H F+ G R PA EK F +R MHL+D GS D+H LG G Sbjct: 174 DAGHWFSFGRGSRDPAGLEKWLDVFGT-----RIRHMHLHD---NDGSD-DQHLGLGSGR 224 Query: 239 IGHDAFRWIM 248 I + I Sbjct: 225 I---PWSRIF 231 >UniRef50_A3CSY1 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSY1_METMJ Length = 276 Score = 67.1 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 84/249 (33%), Gaps = 36/249 (14%) Query: 52 FKAACEKYHYTSAQILPHDSYL---INLGHP-----VTEALEKSR--DAFIDEMQRCEQL 101 F+ ++ + ++ H + +N P A+ K+ +A ++ + L Sbjct: 45 FRERLDRIAASGIPVVVHAPHHGHGVNPCAPAAYDDRPLAVIKAYIEEAMSRTLEAADTL 104 Query: 102 GLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENT----AGQGSNLGFK 157 G + H G + E + ++ LD+ +EN AG LG Sbjct: 105 GAETIVLHAGRY-----EPGGRSAAEDTFADFLDRNADPRLTLENLPAVYAGYP-LLGNT 158 Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCH-AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMH 216 E LAA+ C+D H A A Y + F G + H Sbjct: 159 AEDLAAL----AGNKITRFCLDFPHLACTANY---RHLSFAEELERFE---GLN-VALHH 207 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINP--DIWAEEIAW 274 L + GS D H L + G D + R G+P LE D++A ++ Sbjct: 208 L--SNIRCGSITDEHLELDRPDGGLDLAAVFARLRRHAGVPTTLEYKEDSADVYARQVKV 265 Query: 275 LKAQQTEKA 283 ++A Sbjct: 266 FAGLWEDRA 274 >UniRef50_B0MII0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MII0_9FIRM Length = 281 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 67/189 (35%), Gaps = 19/189 (10%) Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA- 133 ++ E +K++ F ++ +L + G E+ R E + Sbjct: 83 HMAAKRPEIRKKAKRYFQHMIRAASELDCDRVLITSGWQFFSEDREEAWKRSEEMVGELC 142 Query: 134 -LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 + GV +E + + + L + E + +++ V FA D+ T Sbjct: 143 RFSEDYGVYLTMETLSKKSTRLCNRLEDVKRMMEAVNSGQ-----------FAVTADIHT 191 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDR 252 ++ D+ G K L +H D + S H G+G + ++ + Sbjct: 192 IHNAGESLQDWFDAFG-KRLNLVHFMDYRDGAFS----HLKWGDGTCDLEGTLKLLDQND 246 Query: 253 FDGIPLILE 261 + G PL+LE Sbjct: 247 YRG-PLVLE 254 >UniRef50_A1ZRD9 AP endonuclease, family 2, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRD9_9SPHI Length = 266 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 47/249 (18%) Query: 55 ACEKYHYTSAQILPHDSYLINL---------GHPVTEALEKSRDAFIDEMQRCEQLGLSL 105 A EK + IL Y + + + + ++ +LG++ Sbjct: 43 ALEKNIKETQDILKGFPYPVTMHGAFWDLRIAVREPMIRQVAEFRMRQSLEIAHELGINK 102 Query: 106 LNFHPGSHLMQISEEDCLARIAESIN--IAL---DKTQGVTAVIENTAGQGSNLGFKFEH 160 + FHP + ++ + + I+ AL + G+T +ENT G+ + ++ Sbjct: 103 VVFHPNYTSRRNDDDMKRYWVGQQIDFWRALQPDAQKHGITIYLENT-GEPTA-----DY 156 Query: 161 LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDA 220 + I++ + D C+DT H G D + + T++ +G+ +L H N Sbjct: 157 IHQILNQL-DPQVFATCLDTGHLNVFG-DNKNVLDWVNTYS---HQLGYVHL---HANFG 208 Query: 221 KSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP--------LILETINPDIWAEEI 272 K D H + EGN+ F + I +I+E + + + + Sbjct: 209 K------RDEHIAYTEGNMDFTGF-----FEALTNIEQGSGTRPWIIIEVKSREAYLKSY 257 Query: 273 AWLKAQQTE 281 L+ Q + Sbjct: 258 EALRRQYGQ 266 >UniRef50_UPI0001C41B6B xylose isomerase-like TIM barrel domain-containing protein n=2 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B6B Length = 257 Score = 66.8 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 28/216 (12%) Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLA 124 H ++ +N+ + + S + + + ++ HPG S + E+ Sbjct: 61 IHSPFIDLNIASLNSALAKLSVEEIKRSIDLANMIDSDIVVAHPGFVSFNGRGKEDIIYE 120 Query: 125 RIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 E + D K GV A IEN + L + +E + +D H Sbjct: 121 IGREGLVEIGDYAKDNGVNACIENLPKIEGFMYQDVNQLNDTLVELELP----MTLDIGH 176 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A AG+ + F ++ +H++D D H +LG+G + Sbjct: 177 AHTAGFS--------------PDEIYFDSVKHIHVHDNPGD----DDTHLALGDGTFDVN 218 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 F + + +DGI +LE + D + + ++K Sbjct: 219 GFFDVFTKNGYDGI-YMLELNHIDFIQKTLDYMKNL 253 >UniRef50_UPI0001C36838 binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36838 Length = 281 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 85/235 (36%), Gaps = 16/235 (6%) Query: 23 EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTE 82 + L+ + W Q +++ K C + + +P +Y GH E Sbjct: 28 ATGIRSLELWMGSPHFWIDTTGYFQCLEKKKQICGHQLHVVSACVPSMAYQYQYGHGNKE 87 Query: 83 ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA--LDKTQGV 140 EKS F + ++ +G ++ + GS + E+ + AE +N + +GV Sbjct: 88 YREKSFQFFSNGIKAAAAMGAKVVVVNSGSCEYGVPFEEAVKGPAELLNRLGRVAGQEGV 147 Query: 141 TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTF 200 T IE+ +N+ +H +I + S + DT + AG +T Sbjct: 148 TMAIESLTADETNIADNLKHTKELIRQADTPS-LKAMADTVAIYFAG----------ETL 196 Query: 201 ADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 ++ + G +H++ R H + G+G M+ + G Sbjct: 197 EEWFQAFGKD---LIHMHFIDGFIKKRTYDHLAWGDGEFPLAEMVRCMEKYEYTG 248 >UniRef50_Q49058 Similar to AP-endonucleases (Fragment) n=1 Tax=Mycoplasma capricolum RepID=Q49058_MYCCA Length = 71 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 221 KSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWL 275 K S DRH ++G G +G D ++ D F I ILET D + EI L Sbjct: 5 KIWLDSHKDRHANIGYGFVGFDTLVNVVFDKDFSNISKILETPYIDKKAPYKIEIEDL 62 >UniRef50_UPI0001C41E27 xylose isomerase-like TIM barrel domain-containing protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E27 Length = 252 Score = 65.2 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 34/239 (14%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 + A E + L P + E K E +H I H + Sbjct: 15 VDEMLEIAVENGFDSVELL-------AEGPYRQDILLERKEITETFHSYDLDIYIHGVNV 67 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM--QISEEDCLARIAESI 130 INL ++S + + +++G + HPG + E L + ES Sbjct: 68 DINLASLNEGIRKESVKQTKECLDLADEIGAIGVTAHPGKIGRPEKYLREMALGFLTEST 127 Query: 131 NI--ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 + A + + IEN + S LG + L + + +++ + ID H Sbjct: 128 HELVAYAEDKEAKISIENMPERFSYLGNRAYEL----ENLTNETGCNITIDLGH------ 177 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 + T + F + H+ND D+H ++G+G + + +++ Sbjct: 178 -VNTCKDQLSFFE-------IPNILYYHINDNDGI----KDKHQAIGDGTLDLNLLKYV 224 >UniRef50_A7I6Z5 Xylose isomerase domain protein TIM barrel n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I6Z5_METB6 Length = 253 Score = 65.2 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 76/243 (31%), Gaps = 41/243 (16%) Query: 48 TIDEFKAACEKYHYTSAQILPHDSYL--INLGHPVTEALEKSRDAFIDEMQRCEQLGLSL 105 + + AC + H L INL D C+ + Sbjct: 42 DLFRYHEACASVDARYS---VHAP-LSDINLASTNDRIRTAGLAVIDDLCSICDAIRAET 97 Query: 106 LNFHPGSHLMQISEEDCLARIAESINI--ALDKTQGVTAVIENTAGQGSNLGFKFEHLAA 163 L HPG + A + S++ L K V IEN GS F Sbjct: 98 LVVHPGYFPWENMFGISYAALMHSLDDIAVLQKKHEVRIGIENM---GSWECLHFRQ--- 151 Query: 164 IIDGVEDKSR--VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 D + + R +G +D HA FA G +HL+D Sbjct: 152 -PDLLPELERRDIGFVLDIGHAR-----------LNHALCMFA---GKSRPCHIHLHDN- 195 Query: 222 STFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G D H + G G I ++ I+E ++P + + +A+L Q E Sbjct: 196 ---GGTNDDHAACGSGTIDFARLLPLLPASASR----IIECMDPRAYEKSVAYL--LQAE 246 Query: 282 KAV 284 A+ Sbjct: 247 AAI 249 >UniRef50_Q12VU1 Xylose isomerase-like TIM barrel-domain protein n=4 Tax=Methanosarcinaceae RepID=Q12VU1_METBU Length = 269 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 15/164 (9%) Query: 89 DAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINI--ALDKTQGVTAVIEN 146 + ++ +L + HPG + + L R+ ++ A V +EN Sbjct: 86 KLMEECIELAGKLETKAVVIHPG--RVGDDRQRSLGRMTTNLKRLAAFASENNVMLGLEN 143 Query: 147 T-AGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFAR 205 A NL + E L +++ V D S +GV D HA T + +F R Sbjct: 144 KEATDPGNLCCEAEELLKVVNEV-DSSNLGVTFDIGHAN------LTCGGDHEKLNEFIR 196 Query: 206 TVGFKYLRGMHLNDAKSTFGSR--VDRHHSLGEGNIGHDAFRWI 247 TV + + +HL+D T+ S D H + G G I + + Sbjct: 197 TV-SEQVIHVHLHDNYGTWTSNYDGDEHMAPGTGTIDYSVLNSL 239 >UniRef50_A6UKP5 Xylose isomerase domain protein TIM barrel n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UKP5_SINMW Length = 279 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 28/227 (12%) Query: 39 WRAAP---LTTQTIDEFKAACEKYHYTSAQILPHDS----YLINLGHPVTEALEKSRDAF 91 W AAP + +T+ + +A K I+ Y IN+ E ++S F Sbjct: 38 WAAAPHFYIGDKTLADARALGRKVRGMGLNIVAFTPEQCIYPINISAREPELRDRSLRYF 97 Query: 92 IDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAG 149 ++ M+ + G L G E L R +S+ I D+ Q G+ +E+ Sbjct: 98 LESMEFATECGAPALLVTAGGGYRDEPTEQALERCVDSMGILCDRAQKLGIHLWMESLPD 157 Query: 150 QGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFAD-FARTVG 208 +N+ + ++D ++ + V YD+ +T D F + G Sbjct: 158 SFANIISSAREIRELMDKLKSPALHAV-----------YDVAGAVMTHETPEDYFTQLAG 206 Query: 209 FKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 + +H D+ + GS H + G+G I D ++ ++G Sbjct: 207 --RVAHVHFTDSDAG-GS----HLAWGDGVIDLDKLVAYLRSQNYEG 246 >UniRef50_Q2FTK0 Xylose isomerase-like TIM barrel n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTK0_METHJ Length = 281 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 14/168 (8%) Query: 25 DATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEA 83 A + + W L +DE K + S + H L +N + Sbjct: 26 GADCLEFWLETPDFW----LKGLCLDELKRQVKASPTRS-PLSVHAPVLDLNPCSINPDV 80 Query: 84 LEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE----DCLARIAESINIALDKTQG 139 E S ++ EQ+ S+ HPG + L + + I D+ + Sbjct: 81 REVSIRWIERSIELAEQIEASVCTIHPGRRTAKRPPSITDYQRLGFMLDRIERIADEVR- 139 Query: 140 VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 V IEN + L + II ++++S + D HA +G Sbjct: 140 VKIAIENMEPAVNALLTTPDE---IIKVLDERSWLYFTFDYAHAVGSG 184 >UniRef50_O26349 Conserved protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26349_METTH Length = 233 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 85/274 (31%), Gaps = 50/274 (18%) Query: 1 MKYIGAHVSA----AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 M IG VS L + A + ++ +T EF Sbjct: 1 MMRIG--VSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLS--EVEVTDSHSLEFT--- 53 Query: 57 EKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--H 113 H IN+ E S + +L ++ HPG+ Sbjct: 54 -----------VHAPISDINIASLNDTVREASIREVESAVDLAVELDSDVVVVHPGTVPF 102 Query: 114 LMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 L + + R ES+ + GV EN L + E L + + + Sbjct: 103 LGRPYRDLIAERNLESLAAISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELG-- 160 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRH 231 V V +D HA GY T ++ +HL+D VD H Sbjct: 161 --VMVTLDAAHAATMGY--STEEMVSA------------HVGHVHLSDNTGE----VDSH 200 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILETINP 265 +LGEG++ A ++ + G+ L +E P Sbjct: 201 DALGEGSLDFQALLDGLRGAGYTGV-LTVEVKTP 233 >UniRef50_A2BJW8 AP endonuclease family 2 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJW8_HYPBU Length = 273 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 34/206 (16%) Query: 52 FKAACEK-YHYTSAQILPHDS----YLINLGHPVTEALEKSRDAFIDE----MQRCEQLG 102 F+AA ++ + H YLI LG K+ + ++E + G Sbjct: 50 FRAALQEASRLGVKPLTLHAPWEEYYLIMLG--------KNIEYAVEEARILLDMAYSYG 101 Query: 103 LSLLNFHPGSH-LMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHL 161 + ++ FHP S + S L + ++ + +G++ V A + + Sbjct: 102 VDVVVFHPFSAQRVGESRVVWLNKKFFALLADYSEHEGLSIVAIENA-ERRKPWNSIAAI 160 Query: 162 AAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 ++ V R+ VCID HA GY TP + G + + +H++D Sbjct: 161 TSLARSVGS-QRLSVCIDVGHANINGY---TPQRIGEELE------GVEPI-CIHIHDND 209 Query: 222 STFGSRVDRHHSLGEGNIGHDAFRWI 247 R D+H G G I + + Sbjct: 210 G----REDKHELPGTGTIDWEGIASL 231 >UniRef50_B5YFP0 AP endonuclease, family 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFP0_THEYD Length = 252 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 29/230 (12%) Query: 54 AACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 +K + + H ++ ++ G + E + + F L + FH G Sbjct: 45 EKLKKAFFNETSLSFHAPFMDLSPGAIDSRVREVTIERFNQIFDIATLLNPKSIVFHSGY 104 Query: 113 HLMQISEEDCL--ARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 + + + + ++ L + + + IEN + + E L +++ + Sbjct: 105 EKWKYAFKVDIWLEASLKTWERILPRAEQLKIKIAIENIFEE------EPESLRMLVEKI 158 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 G+C DT H ++L + E+ Y+ +HL+D F Sbjct: 159 SSPY-FGICFDTGH-----FNLFSKKSIEEWMFCLN-----DYIVEIHLHDNNKNF---- 203 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H ++G G + F + ++ +E +P+ + + L Sbjct: 204 DEHLAIGSGCFDFEKFFELFKN---KNCIYTIEAHSPENVFKSLKMLDKL 250 >UniRef50_A3CUM4 Xylose isomerase domain protein TIM barrel n=5 Tax=Methanomicrobiales RepID=A3CUM4_METMJ Length = 243 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 67/215 (31%), Gaps = 35/215 (16%) Query: 67 LPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 H +N+ + S + ++G + HPG + E R Sbjct: 52 FIHAPARGVNIASLLEPIRRASVEVLAQAFAVAAEVGAD-VVIHPGYYAWSEERERAAER 110 Query: 126 IAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +S++ + VT +EN + L +IDG +G+ +D HA Sbjct: 111 FRQSLSELTAAAEDLSVTFFVENMGNWEYFFLRTCDDL-PLIDG------IGLALDVGHA 163 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRG-MHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 F + HL+D D H +G+G I Sbjct: 164 -----------NLNGCLDCF-----LAHPAAHFHLHDNDG----TGDTHSPVGDGTID-- 201 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 F +M+ R G I+E + I+ L+ Sbjct: 202 -FSAVMKAVRRSGAVPIVEVDTLEGVTASISALEG 235 >UniRef50_C5ZZU7 Predicted AP endonuclease n=1 Tax=Thermococcus sibiricus MM 739 RepID=C5ZZU7_THESM Length = 272 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 57/176 (32%), Gaps = 31/176 (17%) Query: 85 EKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVI 144 K+ + + + L + H G + R A+ + GV VI Sbjct: 82 RKNIEIMENVFEIARTLDAKYVVVHGGDIKDSYHKALVNTRKQMMELSAVAEEYGVKLVI 141 Query: 145 ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFA 204 EN + +G L ++ V VC D HAF + ++ Sbjct: 142 ENL--IDNRIGAFPHELIPFLE-----ENVSVCFDIGHAF------INSLKYGLGVEEYM 188 Query: 205 RTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLIL 260 G ++ +HL+D D H +LGEG I D IP IL Sbjct: 189 LLPGIEH---VHLHDNNGA----KDEHRALGEGRINFDDL-----------IPKIL 226 >UniRef50_B8GFX2 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFX2_METPE Length = 264 Score = 62.5 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 39/218 (17%) Query: 56 CEKYHYTSAQILPHDSY---LINLGHP---------VTEALEKSRDAFIDEMQRCEQLGL 103 E+ T A+I+ H + +N P EA ++ D + ++L Sbjct: 40 IEEIATTDARIVVHAPHHLDRVNPADPSLGGSMSVTDGEAQIEA--GMADAFEFADRLDA 97 Query: 104 SLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNL---GFKFEH 160 S + H G + + + + + I+ D+ +IEN +L G E Sbjct: 98 SYIVAHAG-FIGHLDRQKVVNNVRSFIDRYHDR----RLLIENLPAVHKDLQFFGATAEE 152 Query: 161 LAAIIDGVEDKSRVG-VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLND 219 L ++ + SR+G +C+D H + + L P + F+ +R HL++ Sbjct: 153 LKSL-----NLSRIGGICLDFAHLYCSANYLSNPYG--EMLTAFSAL----PVRFHHLSN 201 Query: 220 AKSTFGSRVDRHHSLG--EGNIGHD-AFRWIMQDDRFD 254 +++ GS D+H L EG + D W+ Sbjct: 202 SRT--GSITDQHLPLDHSEGGVPIDQVMAWVKNHPANQ 237 >UniRef50_B3DUJ2 Sugar phosphate isomerase/epimerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUJ2_METI4 Length = 282 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 74/210 (35%), Gaps = 24/210 (11%) Query: 59 YHYTSAQILPHDS-YL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP-GSHLM 115 + H Y +L HP E S + + ++L ++L HP G Sbjct: 61 SSLGLKAVSLHSPFYPSFDLSHPDRLIQEASLNITLSAAAALKELEGNILVVHPSGIECD 120 Query: 116 QI----SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 ++ ++ L RI +SI++ T + V+ S LG L ++ Sbjct: 121 RVLDLEERKERLNRIEKSISLIYQHTAKLGLVLALETLLPSFLGSDLVFLYQLVSQ--YP 178 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRH 231 VG+C DT H + LR + AR V +H+ D G D H Sbjct: 179 PSVGICFDTGHVY-----LRYKDNFINRYRQIARKV-----VALHVQDT---LGEH-DDH 224 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILE 261 +G I F +++ F +LE Sbjct: 225 LPPAKGVICWKDFVKALKESNFQST-FLLE 253 >UniRef50_D1YUX5 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YUX5_METPS Length = 263 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 83/238 (34%), Gaps = 28/238 (11%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 + A + + + + + L+ E K A ++ H + Sbjct: 15 ILQEINYAKDAGFDFLEISAEGPKFTTSKLLS--RAGEIKKARDEAGIFFT---CHTPWG 69 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 N+G+P + + I + E++ L+ H + ++ + +AE +++ Sbjct: 70 WNVGNPYKPIRDATLSEVIGVIGFAEEVEARLVTVHMHTRFGLYHRDEMIRHMAEGLSVL 129 Query: 134 LDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 D+ + G+ +EN + + + + + R +D HA + Sbjct: 130 CDRAEKSGMPVTVEN-------VDQSVDDFKKLFEL---EPRAKFHLDVGHANISCKGGA 179 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 A+ TF L +H++D K G D H +LG GNI + ++ Sbjct: 180 NIADFIDTFK--------DRLYHVHVHDNKGGHGVDGDLHLALGMGNID---WHKVVN 226 >UniRef50_C5U5E3 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5E3_9EURY Length = 286 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 26/182 (14%) Query: 83 ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE--DCLARIAESINIALDKTQGV 140 E+ + + L + + H G + + L + IN+A + V Sbjct: 88 KGERDLKIMENVFKIASLLNIKYVVIHGGDINGSYHKAYINTLRALKSLINLANE--YSV 145 Query: 141 TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTF 200 V+EN + +G + ++D +GV +D HA Y + Sbjct: 146 KIVLENLC--DNRIGAFPHEFSGLLD-----DEIGVTLDVGHA----YLMCNKYGMS--M 192 Query: 201 ADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP-LI 259 ++ + + Y+ +HL+D FG VD H LGEGNI ++ ++ + R + LI Sbjct: 193 REYFKML-RPYIEHVHLHD---NFG-FVDNHLPLGEGNI---NWKMVLNELRKCKVKNLI 244 Query: 260 LE 261 LE Sbjct: 245 LE 246 >UniRef50_C1XY70 Sugar phosphate isomerase/epimerase n=5 Tax=Thermaceae RepID=C1XY70_9DEIN Length = 254 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 21/197 (10%) Query: 46 TQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLS 104 + + E H ++ +N V A + S + ++ +G + Sbjct: 36 DPRLPSARELAEMGRVAGVGFTLHLPFVDLNSASLVPLAWKSSLERTKTALEFGHTIGAA 95 Query: 105 LLNFHPGSHLMQISEEDCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLA 162 H G ++I E L + AL + +ENT ++L E + Sbjct: 96 CAVMHTGQVPLRI--EIALKYARFRLAEALAALQPSPIPIALENTRLSEADL---LEGVD 150 Query: 163 AIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKS 222 + + D G C+D H G P ++ + + L HL+D + Sbjct: 151 ELKSLLADHPAYGFCLDVGH----GQIELGPGGYKRYYQALS-----DRLIHWHLHDNQG 201 Query: 223 TFGSRVDRHHSLGEGNI 239 + D H +GEG + Sbjct: 202 ----QQDEHLVVGEGTV 214 >UniRef50_C0D4C4 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4C4_9CLOT Length = 289 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 9/151 (5%) Query: 39 WRAAP---LTTQTIDEFKAACEKYHYTSAQILPHDS----YLINLGHPVTEALEKSRDAF 91 W A P L K K + + Y +++ +S + F Sbjct: 36 WAAGPHFYLDDFDYFRMKEFAGKVQRAGMKAVCLTPEQCQYPVSISVEDPVMRRRSLNYF 95 Query: 92 IDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKT--QGVTAVIENTAG 149 + E L + PG ++ S E +A +S+N + + VT V+E A Sbjct: 96 KKAIDAAELLECPKVLVTPGRSMLDYSRETGVALCIDSLNRLAEYAIRRNVTLVLEALAR 155 Query: 150 QGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + + E L ++DG + + +DT Sbjct: 156 TTTFIAHRPEELKVLLDGAGNPPNLVPMLDT 186 >UniRef50_Q12U55 Protein with xylose isomerase-type TIM barrel domain n=5 Tax=Methanosarcinales RepID=Q12U55_METBU Length = 257 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 25/207 (12%) Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESIN 131 +NL + + + + L HPG S E SI Sbjct: 70 MNLAGLNPGIQGEVLRQMKHYLSVASDI-VELAVVHPGYLSPYGGKIPEKAWDMNISSIQ 128 Query: 132 IALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYD 189 D G++ +EN G + + + ++ V D+ VG+ +D HA Sbjct: 129 ELCDTADEYGMSIAVENMPNFPMIFGREPDEMLRMLSDV-DRDNVGMTLDVGHA------ 181 Query: 190 LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 T A E + + +H++D + D H G G + + + ++ Sbjct: 182 -NTSAMVEGFLKKCNKEI-----IHVHIHDNMG----KRDEHLPTGSGTVNWEHVKKGLE 231 Query: 250 DDRFDGIPLILETINPDIWAEEIAWLK 276 + ++ E + + + + +LK Sbjct: 232 NYEGR---MVTELSDLEEARKSVEFLK 255 >UniRef50_UPI0001973D8B hypothetical protein ClM62_09651 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973D8B Length = 292 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 69/223 (30%), Gaps = 46/223 (20%) Query: 19 IRAAEIDATAFALFTKNQRQWRAA--PLTTQTIDEFKAACEKYHYTSAQIL--PHDSYLI 74 A F + + W P T + + A E+ H Y Sbjct: 26 EMAFAAGFDTFDI---SFYDWSLPHSPFLTDGWERWLAGIERKKDELGVTFGQCHA-YTY 81 Query: 75 NLGHPV--------TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS-----HLMQISEED 121 N + E E+S C LG L HP + L+Q S+E Sbjct: 82 NFCAEMTESERRRHEELTERSVYC-------CAALGSRLCVTHPETDFDSPALVQSSKEK 134 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQG----SNLGFKFEHLAAIIDGVEDKSRVGVC 177 +A E + + + +EN G E L + D R+G+C Sbjct: 135 NIAYFRELLRK--TEQYHMAFAVENMCDYAIAPRRKYGVTPEELVDFVTDFGD-ERMGIC 191 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDA 220 D HA D+ + + +G K+L+ H++D Sbjct: 192 WDFEHA-----DIMKQDQRKSLL-----YIG-KHLKATHVSDT 223 >UniRef50_Q0W4S5 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W4S5_UNCMA Length = 261 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 20/174 (11%) Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 H + N+G+P + E + ++ ++ E + L+ H + + + +A Sbjct: 62 CHTPWGWNIGNPYPKIREATVRQVLEVIEFAEAVEARLVTVHMHTRFGLYDRRELIRNMA 121 Query: 128 ESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 S+ + D+ + G+ +EN E + + + R +D HA Sbjct: 122 SSLTVLCDRAEKSGLAITVENVDQAP-------EDFKKLFEL---EPRARFHLDIGHANI 171 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 + + F L +H +D K D H +LG GNI Sbjct: 172 SCTGCNNIVAFIEAFK--------DRLYHVHAHDNKGGHNVEADLHLALGMGNI 217 >UniRef50_C0CGT0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGT0_9FIRM Length = 258 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 29/204 (14%) Query: 49 IDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLN 107 ID ++ + H T I H +L +N + + + + F + +G + Sbjct: 45 IDLWRRRMDSMHCTHVSI--HGPFLDLNPTSYDSYIYQATWNRFSQAYRAAMAIGADKIV 102 Query: 108 FHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 FH + + R+A + L+ + +EN L L ++ Sbjct: 103 FHTCRIPLVNYSQGWAERMANFWSKFLENHSQLPICLENVFDDNPKL------LKQVLKL 156 Query: 168 VEDKSRVGVCIDTCHAFAAGYDLRTPAECEKT-FADFARTVGFKYLRGMHLNDAKSTFGS 226 VE C+D HA ++ +G Y +H++D Sbjct: 157 VEHPHFT-FCLDAAHAH----------CFSSVPITEWVDVLG-PYTSHVHVHDNLGD--- 201 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQD 250 D H ++G+GN+ + ++ Sbjct: 202 -RDAHLAVGDGNL---PWEDLITH 221 >UniRef50_Q2RIM8 Xylose isomerase-like TIM barrel n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIM8_MOOTA Length = 271 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 40/242 (16%) Query: 29 FALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS-YLINLGHPV-TEALEK 86 +F + + WR ++ + Y+ + H Y +NL + Sbjct: 31 LEIFAEGPQ-WRDP---ENGLNLTRTLLRGYNNPRSL---HAPFYDLNLASEKYPPIRDL 83 Query: 87 SRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQ---GVTAV 143 + D + +L + H ++ + + + ++I L + G+ Sbjct: 84 TLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGTRQRVKNILPLLAASARQAGIRLA 143 Query: 144 IENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADF 203 +EN + L F E + ++ + +D HAF G+D+ Sbjct: 144 VENIGLGPTQL-FDSEEYVNLFREIDGIFAL---LDIGHAFLNGWDI----------PRV 189 Query: 204 ARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP----LI 259 +G + L +HL+D + D H +G G+I R + +P LI Sbjct: 190 IWQLG-EKLVALHLHDNRG----HADEHLPIGMGSINWRLIR-----EALALLPSPPALI 239 Query: 260 LE 261 LE Sbjct: 240 LE 241 >UniRef50_Q897Z7 Conserved protein n=1 Tax=Clostridium tetani RepID=Q897Z7_CLOTE Length = 268 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 33/194 (17%) Query: 50 DEFKAACEKYHYTSAQILPHDSYLIN---LGHPVTEALEKSRDAFIDEMQRCEQLGLSLL 106 +EF + I H +L N L + + + + ++ C + + ++ Sbjct: 51 EEFPKLVKDSGLIFENI--HAPFL-NCNMLWSEDEDLRKTTVRKHVQLIEDCAKYEIPIM 107 Query: 107 NFHP-GSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAII 165 H L++ E + I + I A + V IENT +NL + L I Sbjct: 108 VMHISEGFLLKTPNELGIRSIRQIIKEA--ENNNVKVAIENT---DNNLFIDYA-LRNI- 160 Query: 166 DGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFG 225 +G C DT H ++ + ++ L +H++D Sbjct: 161 ----HSPNLGFCFDTSH-----NEISDRNDI-NLLKEYR-----DRLFTLHISDNDGL-- 203 Query: 226 SRVDRHHSLGEGNI 239 DRH +GNI Sbjct: 204 --KDRHWIPYQGNI 215 >UniRef50_A2ST89 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST89_METLZ Length = 242 Score = 60.2 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 46/230 (20%) Query: 66 ILPHDS--------YLI-------NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP 110 + H S Y I N+ + S + + + +G L HP Sbjct: 40 LFRHASVLDKFDLRYTIHAPTADGNIAESFEPIRKASIAVIKETAEIADLVGAKKLVIHP 99 Query: 111 GSHLMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 G L + ++ + SI L + V V+EN ++ F +I + Sbjct: 100 GFCLDPTCRKASVSALHRSIQELGDLQEEFSVRFVMENL----GSMDCCFFQNTELIQDL 155 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 +G+ +D HA T F + + HL+D K Sbjct: 156 RAAG-LGLALDVGHA-----------NLTGTLDAFLK----EKPDHFHLHDNKGMC---- 195 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H + G G + F I+ LILE + + +L + Sbjct: 196 DEHAACGTGIVD---FGKIL--PEIGDATLILEVLKLKDVKPSLEYLTSL 240 >UniRef50_B9Y2T1 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2T1_9FIRM Length = 300 Score = 60.2 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 36/178 (20%) Query: 79 PVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG---------------SHLMQISEEDCL 123 E ++ R + L + HPG + L + E+ Sbjct: 84 EDPE-QKRVRHYMQKSLDIYSVLDPGVFVVHPGTFSDGGFKKNKIVHQASLEKWGAEETH 142 Query: 124 ARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 R+ E++ + +G+ +EN G + + L A+++ V + VG C+D Sbjct: 143 RRVVENLRWFGQRAAEKGIRLAVENI--YGGRFYSQIDELIALVEEV-NLENVGFCLDVG 199 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA G D+ PA ++ K L +HL+D + D+H +G G + Sbjct: 200 HANVDGVDI--PAAIQRM---------GKKLYEVHLHDNNG----KKDQHLPIGFGTV 242 >UniRef50_B7A713 Xylose isomerase domain protein TIM barrel n=3 Tax=Thermus RepID=B7A713_THEAQ Length = 245 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 32/179 (17%) Query: 65 QILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H + ++L P E + + ++R +LG H G + + E+ L Sbjct: 50 PLSVHLPFWNLDLLSPDPEVAGLTLRRLLFGLERAVELGADRAVLHSGLPAGR-TPEEAL 108 Query: 124 ARI---AESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 R AE++ + + + GV +ENT L +++ + + +G C Sbjct: 109 ERAPVFAEALRPVVRRARALGVALFLENTHEP------DPASLKVVLEALPE---LGFCF 159 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 D HA + + + + A +HLND + DRH +LG G Sbjct: 160 DASHA-----QVFSRTPLPEPWLALA-------PDHLHLNDHDGAY----DRHWNLGRG 202 >UniRef50_B9CN09 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN09_9ACTN Length = 282 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 20/166 (12%) Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA- 133 N+ E++++++D F+ + +LG+ ++ PG + + R + Sbjct: 83 NIAARGEESIKRTKDYFLRAINVASELGVGIVVVTPGWGFLDEERTEAWKRSVYMLGNLS 142 Query: 134 -LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 +G+ +E + SNL + E L +ID V + + V +DT + A Sbjct: 143 SYAACKGIVLTVEALQPEESNLCNRCEDLRRLIDEVGSSA-LKVLLDTGAMWRA------ 195 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 +T D+ G +H + + S H + G+G Sbjct: 196 ----HETMQDYFDAFGKD---VVHCHFTDAGTVS----HLAWGDGE 230 >UniRef50_A8THY1 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8THY1_METVO Length = 308 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 90/298 (30%), Gaps = 58/298 (19%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 + E++ + F +N W+ +++ +K + H Y Sbjct: 25 PIEEIVDIVRELELSCFEFVVENPEFWKNR-----YDEDYLKNLKKEMLKIKHLCVHAPY 79 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG----SHLMQISEEDCLA--- 124 + +N + + + + + FH G L +I+EE Sbjct: 80 IELNPASTNENLRNITLEETFWALNVAKFYEAKHMVFHAGQRSAKRLPRINEEYAYLSNY 139 Query: 125 -RIAESINIALDK-------------TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED 170 R+ +N +D + + +EN+ + L E + ++ Sbjct: 140 IRLCCKLNEYVDYRDLESVQQIDELISNELILSVENSPQGINKLCKTPEEINYYLNK--- 196 Query: 171 KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR 230 ++ +D HA +F + V + +H+ S S+ Sbjct: 197 YEKLRFTLDFVHA-------------RTHVEEFLKNVDTSKISNVHI----SGVNSKDTD 239 Query: 231 HHSLGEGNIGHDAFRWIMQ-------DDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 H+SL + ++ + + +ILE N ++ K Q+ + Sbjct: 240 HYSLKN---SEEPYKSLFEKSIYDLVHKYNYKSSIILE-FNDLLYNNGNDMTKKQKMD 293 >UniRef50_B9LR33 Xylose isomerase domain protein TIM barrel n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LR33_HALLT Length = 249 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 19/179 (10%) Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +L H Y L V E + D ++ +LG H S + Sbjct: 47 LAGRDLLVHLPYSQRLASYVPEVNDAIVDYQRRLLEAAGELGAEKAVLHATSA--DRDDT 104 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + AE + D + + + G + L I + + +C D Sbjct: 105 EFREVAAEQLRRVADAGRDAGVEVVVENVGHQHAGLQLSVLGDIARETDTR----ICFDL 160 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA+ K F R+ G + +H +DA+ R D H +G G + Sbjct: 161 GHAY--------MEGDNKAIKRFLRSHG-GRISHLHCHDARR----RGDTHLPVGAGEV 206 >UniRef50_B0PBZ9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PBZ9_9FIRM Length = 280 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 34/253 (13%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSA---QILPH 69 L +A A + ++ + +T++ + + Y + + Sbjct: 14 PLEHAFAAAQKYGFDGLEIWGGRPHAY-PQDVTSELAAQVRRWKSVYGVETPMYTPVSIG 72 Query: 70 DSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLS-LLNF--HPGSHLMQISEEDCLARI 126 Y NL + + + F + C + + +L HPG + + Sbjct: 73 MPY--NLCAENQQERQDTLAYFRKAIDGCAAMEIPRMLVVADHPGYTVR---RRAAWRQF 127 Query: 127 AESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 E+++I +GV VIE S + + A ++ + +DT Sbjct: 128 VENLHILGSYGAQRGVRLVIEPLTPMESPVITTADDCADALEDIG--------LDT---V 176 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHL--NDAKSTFGSRVDRHHSLGEGNIGHD 242 A D+ P + + + + ++ +HL ND ++ D H L G + + Sbjct: 177 EAMLDVVPPRIAHEPLSSYFTKL-RGRMQYIHLCNNDGRT------DAHTRLDVGELPVE 229 Query: 243 AFRWIMQDDRFDG 255 ++ RFDG Sbjct: 230 DILRLITQYRFDG 242 >UniRef50_Q8TWL2 Sugar phosphate isomerase/epimerase n=1 Tax=Methanopyrus kandleri RepID=Q8TWL2_METKA Length = 252 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 27/191 (14%) Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HLMQISEEDCLA 124 H + +N P E + + +L L HPG + E + Sbjct: 57 VHAPFADLNPASPSDHHHEYILEVIQRAAELAAELDAHYLTVHPGHLTPVTIHDRELAIE 116 Query: 125 RIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 E++ D+ + GV ++EN LG + + I+ G +D H Sbjct: 117 LAIETLGELADEVRSFGVEPLVENMPDHSLLLGTSADEMEEILRASG----CGFTLDVGH 172 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A A E + + R +H++D D H G G + + Sbjct: 173 ALTA----------EGSLRPYLRL----RPDLLHVHDNSGD----GDEHLPPGSGILDFE 214 Query: 243 AFRWIMQDDRF 253 R + Sbjct: 215 ELRRALHHRVL 225 >UniRef50_O27533 Conserved protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27533_METTH Length = 249 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 70/229 (30%), Gaps = 34/229 (14%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 L N +A + L + W L + E + ++L H Sbjct: 14 PLENILQKAEDDGFELVELLCEGPY-WPRRLLQDGD------SLEVFESFDLEVLIHAPT 66 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAES 129 + +N E++ ++ ++ ++G + + HPG L E+ Sbjct: 67 IDLNPASMNRGIREETGRQMVETIELASRIGATTVTTHPGVVHRREDRIRSAALQFALET 126 Query: 130 INIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 + ++ + + +EN G+ S L ++ + +D HA G Sbjct: 127 LGECVEYAEDLSIKFSVENMPGRFSYLCNNPAEHERFVEKCGSYA----TVDIGHANTTG 182 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 + K H++D + D+H LGE Sbjct: 183 --------------RLQDFLEIKRTAHYHISDNNG----KRDQHLPLGE 213 >UniRef50_C7IJG8 Xylose isomerase domain protein TIM barrel n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IJG8_9CLOT Length = 291 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 39/216 (18%) Query: 47 QTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRD-------AFIDEMQRCE 99 + + + EK T +Q H Y P A K+ + + Sbjct: 58 KNAENIRNEAEKLGITFSQ--SHPPY-----RPFKGAYFKTIEEKERFDELTYRAIHVSS 110 Query: 100 QLGLSLLNFHPGSHLMQISE--EDCLARIAESINIALDKT--QGVTAVIENTAGQGSN-- 153 LG+ HP + + + LA E+ + +++ + V EN + + Sbjct: 111 ILGVKWAVMHPVTETDKAEYNLQADLAANHENFDKVIEQATKENVGIAFENMCDRDNRRR 170 Query: 154 LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLR 213 G E L A++D + + VGVC DT H + +G ++ Sbjct: 171 FGATAEELIALVDSYKG-APVGVCWDTGHGH---------RVYSNQIPALEK-LG-SRIK 218 Query: 214 GMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 +H+ND FG + D H G I + +M+ Sbjct: 219 ALHVND---NFG-QDDLHLLPFLGTI---PWEKVMR 247 >UniRef50_Q0W0Q9 Putative endonuclease IV n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W0Q9_UNCMA Length = 265 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 30/242 (12%) Query: 1 MKYIGA----HVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 M IG H + G E+ A + + R +T ++ Sbjct: 1 MIRIGIAGIPHGAKGKGTEAGIRYLRELGLDAMEI-----QFGRNVYMTPESAKSVAPVA 55 Query: 57 EKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 + ++ H Y +NL + +EKS+D I + G S++ H + Sbjct: 56 MEERV---ELSVHAPYYVNLSSKTEKTIEKSKDWIIKSARVAAAAGASMVTVH---AARE 109 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + + +A E ++ + V +E G + + ++ V S + Sbjct: 110 ENPDLVIAGFREIVSALAKEHISVPLGLETMGDLGEF--GSVDDVLEVVRKVPGTS---I 164 Query: 177 CIDTCHAFA---AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF-GSRVDRHH 232 ID H +A G L++ + A++ G + H++ + R RH Sbjct: 165 VIDFAHIYARTDGG--LKSVEDFSAVLDRVAKS-GINH---YHIHFSGIEHKNCREIRHL 218 Query: 233 SL 234 L Sbjct: 219 PL 220 >UniRef50_A9A740 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus maripaludis C6 RepID=A9A740_METM6 Length = 262 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 58/145 (40%), Gaps = 14/145 (9%) Query: 88 RDAFIDEMQRCEQLGLSLLNFHPGS--------HLMQISEEDCLARIAESINIAL--DKT 137 D + E++ ++ G + H + + ++E+ + +N ++ Sbjct: 99 IDYYRQELKTAKETGAEYVVMHVCHVDLEDSLTYEVNYTDEEVIDEAINLLNEVFNGEED 158 Query: 138 QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECE 197 ++EN G L +++ ++D + K +VG +DT H +L+ E Sbjct: 159 YEFYLLLENLWWPGLKL-KNKDNMRRLVDKINYK-KVGFVLDTGHMLNTNLELKGKNEAI 216 Query: 198 KTFADFARTVGF--KYLRGMHLNDA 220 + + +G Y+ GMHLN + Sbjct: 217 EYIFETIENLGEMKDYIFGMHLNYS 241 >UniRef50_Q8ABB7 Sugar phosphate isomerase / epimerase-like protein n=6 Tax=Bacteroides RepID=Q8ABB7_BACTN Length = 293 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 67/191 (35%), Gaps = 27/191 (14%) Query: 36 QRQWRAAPLTT--QTIDEFKAACEKYHYTSAQILPHDSY--LINLGHPVTEALEKSRDAF 91 + +R P+ I E KA + I H + +++ +++ D Sbjct: 54 NQCYRGVPVDEVIPRIKEMKAKIDSADIEVWSI--HLPFSRTLDISVLDDRLRKENVDFM 111 Query: 92 IDEMQRCEQLGLSLLNFHPGSHLMQIS-EEDCLARIAESINIALDKTQ--GVTAVIENTA 148 + ++ C + L HP S + S +A +ESI G IEN Sbjct: 112 AEMIELCAMFQPTCLVLHPSSEPIADSIRAQRIANASESIAYLKKYADRIGAQLCIENLP 171 Query: 149 GQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVG 208 + LG E L I+ + D V VC DT H Y + T F VG Sbjct: 172 R--TCLGNTPEELMRIVGDIPD---VKVCFDTNH-----Y-------TKGTTEHFVAIVG 214 Query: 209 FKYLRGMHLND 219 + +H +D Sbjct: 215 -SRIGTIHASD 224 >UniRef50_D1CE39 Xylose isomerase domain protein TIM barrel n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE39_THET1 Length = 278 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 32/221 (14%) Query: 3 YIGAHVSAAGG-LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 I H+ G L A+E+ A FT ++ ++EF+ Y Sbjct: 4 RISCHLITWGNDLLTGMKEASELGFQACETFTHQALEY------ENRVEEFRELLGSYDL 57 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + + + + Q +LG+ + F PG + + Sbjct: 58 ELSALYGGGRF------SDPSKEAEVIAYNTRVAQFLSKLGVDRIVFGPGGPREGKTSLE 111 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKF---EHLAAIIDGVEDKSRVGVCI 178 L ++A++IN A +T + + A +LG + + L A+++ +D+ V C Sbjct: 112 GLKQMAKTINEAAKRTYDLGVL----ACVHPHLGTELQDEDELDAVMEMTDDRY-VFFCP 166 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLND 219 DT H AAG + A+ R G +R MHL D Sbjct: 167 DTAHLTAAGMN----------AAEIIRRYG-NRMRYMHLKD 196 >UniRef50_C5A395 Predicted AP endonuclease n=3 Tax=Thermococcaceae RepID=C5A395_THEGJ Length = 262 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 48/145 (33%), Gaps = 21/145 (14%) Query: 96 QRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLG 155 + L ++ H G R A+ + GV ++EN S +G Sbjct: 90 KVASALDARIVVVHGGDIRGSYHRAFTNTRRQLMEISAIAEDYGVKLLVENLT--DSRIG 147 Query: 156 FKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGM 215 L ++ VG+C+D HAF T + +FA + Sbjct: 148 AFPHELLPFLE-----ENVGICLDVGHAF------LTAMKYGIPMDEFA----LLKADEI 192 Query: 216 HLNDAKSTFGSRVDRHHSLGEGNIG 240 H++D D H GEG IG Sbjct: 193 HVHDNNGVM----DEHLPPGEGMIG 213 >UniRef50_A8A905 Xylose isomerase domain protein TIM barrel n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A905_IGNH4 Length = 285 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 35/234 (14%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 L A E ++ D +K + H + Sbjct: 17 LEELLKEAREAGFDYVEFSLDYPLPYK--------ADLVAEIVKKIKDFGLAVSFHAPWR 68 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINI 132 +++ E + S D ++ +LG + +H + +D + + E+ Sbjct: 69 GLDVATLWPEVRKASIDIIKKSIRMASELGAEYVVYHV--TTPEKLFKDTVDEVYEAGKE 126 Query: 133 ALDKTQG------VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA--- 183 A+ + V A +EN G+ I ++D++R C D HA Sbjct: 127 AVAELTDFAREMSVEAAVENVGNLGT------PEFFGI---LKDETRAKFCFDVAHAVTT 177 Query: 184 FAAGYDLR-TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 F + L+ + ++ + +G + L H++ ++ H LG Sbjct: 178 FMQRHKLKLNDVDVDEVIELWKNAIGGRTLCA-HVHGVEAP----RREHRPLGY 226 >UniRef50_C6C274 Xylose isomerase domain protein TIM barrel n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C274_DESAD Length = 269 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 23/180 (12%) Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP--GSHLMQISEEDCLA 124 H +L + S D + + + + HP S L E Sbjct: 67 VHLPFLDLKPSSLNPAIRNASIDTLLTAFELAKFFSPQRMVLHPSFTSWLEPPLFERSYT 126 Query: 125 RIAESINIALDKTQG-VTAVIENTAG-QGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 E I + +ENT + L D+ +G+C D H Sbjct: 127 NCVEGIRRLSNSWPDHPPLCLENTYEFTPDAITRLVTDL--------DRDNIGICFDLGH 178 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 F+ + + F FA Y++ +HL+D GS D H +LG G++ D Sbjct: 179 WFSFSKGAEN-DDFDVWFNAFA-----PYIKHVHLHD---NHGS-KDEHLALGRGSMNWD 228 >UniRef50_A0P1Y9 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1Y9_9RHOB Length = 304 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 84/274 (30%), Gaps = 37/274 (13%) Query: 3 YIGAHVSAAGGLANAAIRAAEI----DATAFALFTKNQRQWRAAPLTTQTI-DEFKAACE 57 +GA +A GL + +I L W + + + + Sbjct: 7 RVGASAESANGLPATINESLDILEKIGTDTVEL----PLLWMELVANGEVMQARLEELRQ 62 Query: 58 KYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG---SHL 114 H + IN L+ + +LG + H G + Sbjct: 63 ALAGRPFGYSAHAAIGINFMS-DPVYLDLHVRLARAHLAISAELGCEHMVLHTGFCPPYF 121 Query: 115 MQISEEDCLARIAESINIALDKTQ--GVTAVIENT-AGQGSNLGFKFEHLAAIIDGVEDK 171 + E + E+ ++ + GV +EN A +G+ L LA + + + Sbjct: 122 AKPQIEKLYDQQRETFLKLGEEAKAAGVVLCVENIFAEKGNRLTATPSQLAKELRLI-NH 180 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS----- 226 S V C+D HA L + + V + +H++D+ G+ Sbjct: 181 SHVMACLDISHA-----ALHCDSLGLDLMEEAGALVPLA--KHVHIHDSFGRTGNIPVHT 233 Query: 227 --------RVDRHHSLGEGNIGHDAFRWIMQDDR 252 D H +G GN+ D + + + Sbjct: 234 QQEALGLGVGDLHLPIGWGNLPFDEIVCLDRFPK 267 >UniRef50_B9KZV5 Putative conserved protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV5_THERP Length = 285 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 39/222 (17%) Query: 45 TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDA---FIDEMQRCEQL 101 + + + + + H L+ L + ++ E+ RC L Sbjct: 39 REREAETIREISRESGLPVRSL--HS--LLRLRSVSPDIQAVDVESSARLAAELPRCSIL 94 Query: 102 GLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQG--SNLGFKFE 159 HP +E + + I + + + +E T GQ F+ Sbjct: 95 -----VVHP----PIGAEREQWTTVMRRIER--SRPEHLRIGLE-TPGQHRRGQRPAPFD 142 Query: 160 HLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLND 219 +L ++ E+ +G+ DT HA + G+DL A + L +HL+D Sbjct: 143 NLEFLVRYAEEWD-LGIVFDTAHAASLGWDL-----------QAALALCLPRLVNVHLSD 190 Query: 220 AKST------FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 A S V H G+G + ++D + G Sbjct: 191 ASDREWWIGFLNSIVRDHRCPGDGILPLRQLLQFLRDQGYRG 232 >UniRef50_A4AP53 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AP53_9FLAO Length = 431 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 94/289 (32%), Gaps = 59/289 (20%) Query: 19 IRAAEIDATAFALFTKNQR----------QW-----RAAPLTTQTIDEFKAACEKYHYTS 63 +A I + A F KN R W + P +D F K + Sbjct: 147 QKAMTIGISTLA-FHKNSREEIVDQARENNWTIEFSSSFPFQEDMVDFFIGTDIKRLAHN 205 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL--------M 115 P + ++INL E + S + I +Q ++ G + H G + Sbjct: 206 YFPAPKEPFVINLASANEEIRKCSIEHCIQGLQLSKKCGAKFFSAHAGFCIDPDPYELGK 265 Query: 116 QISEEDCLAR------IAESINIALDKTQ--GVTAVIEN--TA-------GQGSNLGFKF 158 Q+ + R +S+ I L + + +T +IEN TA GQ + Sbjct: 266 QLDVNVSIDRDLNWKLFLDSVQIILSEAERLNLTFLIENNVTAKFNLRDDGQEVLFCSRA 325 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN 218 E + + + +R G+ +DT H + D + +++ +H + Sbjct: 326 EEMIKFVKEI-SSNRFGLLLDTAHL------KVSSQALNFNMEDAVDKI-TPFVKYLHHS 377 Query: 219 DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDI 267 D D + S+ R F+ ILE N D Sbjct: 378 DNDGE----RDTNESISTNYWFLSKMRN------FEDCIHILEVKNIDT 416 >UniRef50_B9KBM8 Xylose isomerase domain protein TIM barrel n=2 Tax=Thermotoga RepID=B9KBM8_THENN Length = 307 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 48/251 (19%) Query: 46 TQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSL 105 + ++ K Y++ H +INL K +A ++ ++ + Sbjct: 56 KKRLERVKEILSNYNFRYT---VHAPDVINLKRKTNPWHYKVMEAV---IEFAGEINAEV 109 Query: 106 LNFHPGSHLMQISEEDCLARIAE--SINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHL 161 + +H I + + R AE ++ L K +G+ IEN + + Sbjct: 110 IVYHYNEVDHSIDVPERIQRRAEILALRDLADLAKEKGIVIGIEN-------VQHPVSEV 162 Query: 162 AAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 ++ V + V + ID H F + T + + + G Y +H++D Sbjct: 163 LELVKQVNHPN-VKLTIDIGHLF-----ILTSYRGLNFYEELKK--GLPYAVELHVSD-- 212 Query: 222 STFGSR-------------------VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILET 262 FG D H +GEG+I ++ I+++ F GI +ILE Sbjct: 213 -NFGESPQTYQQIPDVEAFRFVYGIGDLHLPIGEGDIPYNRVLKIIRESDFSGI-VILEI 270 Query: 263 INPDIWAEEIA 273 + D +A+E A Sbjct: 271 NSMDRFADEYA 281 >UniRef50_Q2LSS8 Endonuclease IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS8_SYNAS Length = 264 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 86/243 (35%), Gaps = 31/243 (12%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLG 102 L D F+ +++ ++ H ++ + G E SR+ Sbjct: 41 LDATGKDRFREVADRFSDAGLRVTFHAPFMDLRPGAIDPRIREVSRERIQQVFDLVPLFR 100 Query: 103 LSLLNFHPG--SHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKF 158 + HP S SE L + + +++ ++EN + +F Sbjct: 101 PRTIVCHPSFDSRYYVSSERKWLENSTLTWSTFVEQAAEFDTLLLLENVYEKE---PRQF 157 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCH--AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMH 216 HL +D + RV C+DT H AF+ + + + +G +L +H Sbjct: 158 VHLLTALDSL----RVRFCLDTGHCNAFS-----------DAPLSSWLEELGT-FLGEVH 201 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 L+D GS D H +GEGN ++ I L LE + D + + L+ Sbjct: 202 LHD---NDGS-RDAHLPIGEGNFPFMELFGFLKTKVNRPI-LTLEAHSADHLSRTLETLR 256 Query: 277 AQQ 279 + Sbjct: 257 KNR 259 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 343 4e-93 UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4... 321 2e-86 UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organis... 321 2e-86 UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID... 320 3e-86 UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans... 316 6e-85 UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=... 314 2e-84 UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Ta... 311 2e-83 UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax... 311 2e-83 UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepI... 306 7e-82 UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5... 303 6e-81 UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible... 303 7e-81 UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2V... 300 3e-80 UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organism... 298 1e-79 UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putat... 298 1e-79 UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatron... 298 2e-79 UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20... 297 3e-79 UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=... 296 4e-79 UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofu... 293 4e-78 UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospi... 292 8e-78 UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Plancto... 292 8e-78 UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=... 291 1e-77 UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold... 291 2e-77 UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus... 291 2e-77 UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacteri... 290 4e-77 UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon... 289 7e-77 UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-rep... 289 7e-77 UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon... 289 1e-76 UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix ... 288 1e-76 UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=EN... 287 2e-76 UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (... 286 5e-76 UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str.... 286 7e-76 UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota R... 286 7e-76 UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=... 283 4e-75 UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula sta... 282 6e-75 UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental... 282 7e-75 UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organi... 281 2e-74 UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 281 3e-74 UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae R... 281 3e-74 UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=E... 280 4e-74 UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 280 4e-74 UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblasti... 279 7e-74 UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infern... 279 1e-73 UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 ... 278 2e-73 UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae R... 277 2e-73 UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae Rep... 277 3e-73 UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermac... 272 9e-72 UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum... 272 1e-71 UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales Re... 272 1e-71 UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vu... 270 5e-71 UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples Re... 269 7e-71 UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio... 268 1e-70 UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Ku... 267 2e-70 UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS... 267 3e-70 UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio de... 266 9e-70 UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma galli... 265 2e-69 UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=... 265 2e-69 UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellula... 264 2e-69 UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX Re... 264 2e-69 UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacil... 264 3e-69 UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovi... 262 9e-69 UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterin... 262 1e-68 UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogeni... 261 2e-68 UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncult... 259 7e-68 UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 259 1e-67 UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius t... 258 1e-67 UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepI... 258 2e-67 UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID... 257 2e-67 UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospiril... 257 2e-67 UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solib... 257 3e-67 UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium ... 257 4e-67 UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae... 256 5e-67 UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=S... 256 6e-67 UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexi... 256 6e-67 UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales... 255 1e-66 UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobial... 255 1e-66 UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acida... 255 1e-66 UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus... 254 3e-66 UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma Rep... 252 8e-66 UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosp... 252 1e-65 UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penet... 252 1e-65 UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID... 251 2e-65 UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium ... 251 3e-65 UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae Re... 251 3e-65 UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID... 250 3e-65 UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiropl... 250 4e-65 UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces ... 249 6e-65 UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phyto... 249 6e-65 UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID... 248 1e-64 UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermoph... 247 3e-64 UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce ... 246 5e-64 UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophi... 246 6e-64 UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca ... 245 1e-63 UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna... 244 2e-63 UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH 244 2e-63 UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriac... 244 3e-63 UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ell... 241 2e-62 UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 R... 240 3e-62 UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID... 239 6e-62 UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio... 239 6e-62 UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_... 239 9e-62 UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus b... 232 1e-59 UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas au... 229 1e-58 UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Euroti... 228 2e-58 UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03S... 228 2e-58 UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM... 225 9e-58 UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholera... 225 1e-57 UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus Rep... 225 1e-57 UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus... 224 3e-57 UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus... 220 3e-56 UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobiu... 219 9e-56 UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 217 3e-55 UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobac... 206 8e-52 UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba pol... 202 1e-50 UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=... 197 5e-49 UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Copr... 196 8e-49 UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Ta... 195 2e-48 UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Toma... 193 4e-48 UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepI... 190 7e-47 UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseil... 179 1e-43 UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus ... 178 3e-43 UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 T... 174 4e-42 UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Ta... 172 9e-42 UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 ... 160 4e-38 UniRef50_A8ABG7 Endonuclease IV n=2 Tax=Archaea RepID=A8ABG7_IGNH4 156 9e-37 UniRef50_Q58707 Uncharacterized protein MJ1311 n=11 Tax=Methanoc... 153 6e-36 UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_... 153 8e-36 UniRef50_B0K0T0 Xylose isomerase domain protein TIM barrel n=13 ... 152 2e-35 UniRef50_D2RI59 Xylose isomerase domain protein TIM barrel n=1 T... 152 2e-35 UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putat... 151 2e-35 UniRef50_A1RYK4 Endonuclease IV n=10 Tax=Archaea RepID=A1RYK4_THEPD 150 4e-35 UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacteri... 150 4e-35 UniRef50_C5A4T0 Deoxyribonuclease IV (BER) (Nfo) n=2 Tax=Thermoc... 150 5e-35 UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus b... 147 6e-34 UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogen... 146 8e-34 UniRef50_O27091 Endonuclease IV n=2 Tax=Methanobacteriales RepID... 146 8e-34 UniRef50_Q12UI4 TIM alpha/beta barrel protein n=7 Tax=cellular o... 145 2e-33 UniRef50_B0MRK4 Putative uncharacterized protein n=1 Tax=Eubacte... 145 2e-33 UniRef50_A3DNS0 Endonuclease IV n=2 Tax=Desulfurococcaceae RepID... 145 2e-33 UniRef50_B6YWM5 Putative uncharacterized protein n=1 Tax=Thermoc... 145 2e-33 UniRef50_A6P1L7 Putative uncharacterized protein n=1 Tax=Bactero... 145 2e-33 UniRef50_Q0W8Q0 Predicted endonuclease/nucleotidyltransferase n=... 145 2e-33 UniRef50_B8DYJ2 Xylose isomerase domain protein TIM barrel n=2 T... 144 4e-33 UniRef50_D1J987 Putative uncharacterized protein n=2 Tax=environ... 143 5e-33 UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 T... 141 2e-32 UniRef50_A8TE27 Xylose isomerase domain protein TIM barrel n=1 T... 140 4e-32 UniRef50_A4J1S8 Endonuclease IV n=1 Tax=Desulfotomaculum reducen... 140 7e-32 UniRef50_Q3Z9G2 AP endonuclease, family 2 protein n=5 Tax=Dehalo... 140 8e-32 UniRef50_D1YXC1 Putative uncharacterized protein n=1 Tax=Methano... 139 1e-31 UniRef50_Q0W4S5 Putative uncharacterized protein n=1 Tax=uncultu... 138 2e-31 UniRef50_A8MDH2 Xylose isomerase domain protein TIM barrel n=1 T... 138 2e-31 UniRef50_D1PP50 Deoxyribonuclease IV n=6 Tax=Clostridiales RepID... 138 2e-31 UniRef50_Q5NVW6 Predicted sugar phosphate isomerase / epimerase ... 138 3e-31 UniRef50_D1YUX5 Putative uncharacterized protein n=1 Tax=Methano... 137 4e-31 UniRef50_A2ST75 Xylose isomerase domain protein TIM barrel n=1 T... 136 7e-31 UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=... 136 9e-31 UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepI... 135 2e-30 UniRef50_A5UMG1 Sugar phosphate isomerase/epimerase, AP endonucl... 134 3e-30 UniRef50_B1L7K8 Endonuclease IV n=1 Tax=Candidatus Korarchaeum c... 133 6e-30 UniRef50_A1RRV6 Endonuclease IV n=17 Tax=Thermoprotei RepID=A1RR... 133 8e-30 UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 133 9e-30 UniRef50_Q2NGK4 Predicted sugar phosphate isomerase/epimerase or... 133 9e-30 UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Breviba... 133 9e-30 UniRef50_B8D5D1 Endonuclease IV n=1 Tax=Desulfurococcus kamchatk... 132 1e-29 UniRef50_C6A0Y0 Xylose isomerase domain-containing protein n=1 T... 132 1e-29 UniRef50_D1YXJ1 Putative endonuclease IV n=1 Tax=Methanocella pa... 132 1e-29 UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endon... 132 1e-29 UniRef50_A3CT33 Xylose isomerase domain protein TIM barrel n=1 T... 130 8e-29 UniRef50_B8FPG2 Xylose isomerase domain protein TIM barrel n=9 T... 129 1e-28 UniRef50_Q58587 Uncharacterized protein MJ1188 n=5 Tax=Methanoca... 129 1e-28 UniRef50_D1Z1Z5 Putative uncharacterized protein n=1 Tax=Methano... 128 3e-28 UniRef50_A5UMM8 Predicted sugar phosphate isomerase/epimerase, A... 128 3e-28 UniRef50_C4G2Z7 Putative uncharacterized protein n=1 Tax=Abiotro... 127 4e-28 UniRef50_Q57597 Uncharacterized protein MJ0133 n=12 Tax=Methanoc... 126 6e-28 UniRef50_A3CVT4 Xylose isomerase domain protein TIM barrel n=4 T... 126 8e-28 UniRef50_A5ULU0 Endonuclease IV, xylose isomerase-like TIM barre... 126 9e-28 UniRef50_UPI0001C36838 binding-protein-dependent transport syste... 126 1e-27 UniRef50_Q59009 Uncharacterized protein MJ1614 n=6 Tax=Methanoco... 126 1e-27 UniRef50_B1I648 Xylose isomerase domain protein TIM barrel n=3 T... 125 2e-27 UniRef50_Q12U55 Protein with xylose isomerase-type TIM barrel do... 125 2e-27 UniRef50_O27533 Conserved protein n=1 Tax=Methanothermobacter th... 124 3e-27 UniRef50_O26349 Conserved protein n=1 Tax=Methanothermobacter th... 124 3e-27 UniRef50_Q0W7H9 Putative uncharacterized protein n=1 Tax=uncultu... 123 5e-27 UniRef50_Q39ZU4 Putative uncharacterized protein n=1 Tax=Pelobac... 122 1e-26 UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Anto... 122 1e-26 UniRef50_Q315E0 AP endonuclease, family 2 n=1 Tax=Desulfovibrio ... 122 2e-26 UniRef50_A5UTA1 Xylose isomerase domain protein TIM barrel n=1 T... 121 2e-26 UniRef50_B9CN09 Binding-protein-dependent transport systems inne... 120 4e-26 UniRef50_C0GFP7 Xylose isomerase domain protein TIM barrel n=1 T... 120 5e-26 UniRef50_B5YFP0 AP endonuclease, family 2 n=1 Tax=Thermodesulfov... 120 6e-26 UniRef50_A8TFI1 Xylose isomerase domain protein TIM barrel n=1 T... 120 8e-26 UniRef50_A3CUM4 Xylose isomerase domain protein TIM barrel n=5 T... 119 1e-25 UniRef50_UPI0001C41B6B xylose isomerase-like TIM barrel domain-c... 118 2e-25 UniRef50_A3CX04 Xylose isomerase domain protein TIM barrel n=2 T... 118 2e-25 UniRef50_B8H746 Xylose isomerase domain protein TIM barrel n=1 T... 117 4e-25 UniRef50_Q2FTK0 Xylose isomerase-like TIM barrel n=1 Tax=Methano... 117 4e-25 UniRef50_UPI0001C41E27 xylose isomerase-like TIM barrel domain-c... 116 6e-25 UniRef50_A5G934 Xylose isomerase domain protein TIM barrel n=9 T... 115 1e-24 UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine f... 115 1e-24 UniRef50_A7I9J6 Xylose isomerase domain protein TIM barrel n=1 T... 115 2e-24 UniRef50_Q2LSS8 Endonuclease IV n=1 Tax=Syntrophus aciditrophicu... 115 2e-24 UniRef50_B0MII0 Putative uncharacterized protein n=2 Tax=Clostri... 115 2e-24 UniRef50_C0D4C4 Putative uncharacterized protein n=1 Tax=Clostri... 114 3e-24 UniRef50_A0LJR2 Xylose isomerase domain protein TIM barrel n=1 T... 113 6e-24 UniRef50_Q0W0Q9 Putative endonuclease IV n=1 Tax=uncultured meth... 113 8e-24 UniRef50_B1L7I1 Xylose isomerase domain protein TIM barrel n=1 T... 112 1e-23 UniRef50_C6C274 Xylose isomerase domain protein TIM barrel n=1 T... 112 1e-23 UniRef50_C9L713 AP endonuclease, family 2 n=1 Tax=Blautia hansen... 112 2e-23 UniRef50_A7I6Z5 Xylose isomerase domain protein TIM barrel n=1 T... 112 2e-23 UniRef50_A2ST89 Xylose isomerase domain protein TIM barrel n=1 T... 112 2e-23 UniRef50_C0CGT0 Putative uncharacterized protein n=1 Tax=Blautia... 112 2e-23 UniRef50_Q2BFE3 Predicted endonuclease n=1 Tax=Bacillus sp. NRRL... 110 4e-23 UniRef50_A5IJZ8 Xylose isomerase domain protein TIM barrel n=4 T... 110 5e-23 UniRef50_A8RXQ0 Putative uncharacterized protein n=1 Tax=Clostri... 110 7e-23 UniRef50_A8RGW7 Putative uncharacterized protein n=1 Tax=Clostri... 110 8e-23 UniRef50_A6UKP5 Xylose isomerase domain protein TIM barrel n=1 T... 110 9e-23 UniRef50_Q0FNT8 AP endonuclease, family 2 n=1 Tax=Roseovarius sp... 109 1e-22 UniRef50_B0AAE1 Putative uncharacterized protein n=1 Tax=Clostri... 109 1e-22 UniRef50_A0P1Y9 Putative uncharacterized protein n=1 Tax=Labrenz... 108 2e-22 UniRef50_A1ZRD9 AP endonuclease, family 2, putative n=1 Tax=Micr... 108 2e-22 UniRef50_C1F9P4 AP endonuclease, family 2 n=1 Tax=Acidobacterium... 108 2e-22 UniRef50_C4XSI1 Putative uncharacterized protein n=1 Tax=Desulfo... 108 2e-22 UniRef50_Q2RIM8 Xylose isomerase-like TIM barrel n=1 Tax=Moorell... 108 2e-22 UniRef50_B8IW61 Xylose isomerase domain protein TIM barrel n=1 T... 108 3e-22 UniRef50_A8TLJ8 Putative uncharacterized protein n=1 Tax=alpha p... 107 4e-22 UniRef50_A0LE74 Xylose isomerase domain protein TIM barrel n=1 T... 107 4e-22 UniRef50_B3DUJ2 Sugar phosphate isomerase/epimerase n=1 Tax=Meth... 106 8e-22 UniRef50_B5WBQ3 Xylose isomerase domain protein TIM barrel n=1 T... 106 9e-22 UniRef50_Q0W054 Putative uncharacterized protein n=1 Tax=uncultu... 106 1e-21 UniRef50_B0PBZ9 Putative uncharacterized protein n=2 Tax=Clostri... 106 1e-21 UniRef50_B9KBM8 Xylose isomerase domain protein TIM barrel n=2 T... 105 1e-21 UniRef50_C5RPK7 Xylose isomerase domain protein TIM barrel n=1 T... 105 2e-21 UniRef50_C1XY70 Sugar phosphate isomerase/epimerase n=5 Tax=Ther... 105 2e-21 UniRef50_A8THY1 Xylose isomerase domain protein TIM barrel n=1 T... 105 2e-21 UniRef50_A4WYQ2 Binding-protein-dependent transport systems inne... 105 2e-21 UniRef50_A4FYK6 Xylose isomerase domain protein TIM barrel n=5 T... 105 2e-21 UniRef50_D1X164 Xylose isomerase domain protein TIM barrel n=4 T... 105 2e-21 UniRef50_Q97DH8 Predicted endonuclease n=3 Tax=Clostridiales Rep... 105 2e-21 UniRef50_A0LJR1 Xylose isomerase domain protein TIM barrel n=1 T... 105 2e-21 UniRef50_Q214G7 Endonuclease IV n=1 Tax=Rhodopseudomonas palustr... 104 4e-21 UniRef50_C5ESX6 AP endonuclease n=1 Tax=Clostridiales bacterium ... 104 4e-21 UniRef50_Q1IHQ2 Xylose isomerase-like TIM barrel n=1 Tax=Candida... 103 5e-21 UniRef50_A8A905 Xylose isomerase domain protein TIM barrel n=1 T... 103 5e-21 UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoform... 103 6e-21 UniRef50_Q89P16 Blr3667 protein n=1 Tax=Bradyrhizobium japonicum... 103 6e-21 UniRef50_C6PL93 Xylose isomerase domain protein TIM barrel n=3 T... 103 7e-21 UniRef50_A4EBY9 Putative uncharacterized protein n=1 Tax=Collins... 103 7e-21 UniRef50_Q8TWL2 Sugar phosphate isomerase/epimerase n=1 Tax=Meth... 102 1e-20 UniRef50_Q12VU1 Xylose isomerase-like TIM barrel-domain protein ... 102 1e-20 Sequences not found previously or not previously below threshold: UniRef50_A4XGK0 Xylose isomerase domain protein TIM barrel n=1 T... 109 1e-22 UniRef50_C9Y264 Protein frlC n=2 Tax=Cronobacter RepID=C9Y264_CROTZ 104 5e-21 >UniRef50_P0A6C2 Endonuclease 4 n=315 Tax=Bacteria RepID=END4_ECO57 Length = 285 Score = 343 bits (881), Expect = 4e-93, Method: Composition-based stats. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH Sbjct: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE Sbjct: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA Sbjct: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 >UniRef50_Q4N5F6 Apurinic/apyrimidinic endonuclease, putative n=4 Tax=cellular organisms RepID=Q4N5F6_THEPA Length = 422 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 128/283 (45%), Positives = 183/283 (64%), Gaps = 4/283 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIGAHVSA+GG N+ A I AFALF KNQR W L+ I++F+ ++Y Sbjct: 140 VYIGAHVSASGGPDNSVGNAYNILGQAFALFLKNQRTWNWTDLSKSAIEKFQINMLNHNY 199 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH SYLIN+ +P E +++ D F+D++QRCE LG++L NFHPGS + + Sbjct: 200 DPKFVLPHASYLINVANPDPEKRKRAFDNFLDDIQRCEVLGITLYNFHPGSTCGLCEKSE 259 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + I++ IN AL+ T+GVT V+EN AGQ + +G KFE L IID VEDKSRVG+C+DTC Sbjct: 260 GIQHISDCINKALEMTKGVTIVLENAAGQKNVIGSKFEDLRQIIDKVEDKSRVGICLDTC 319 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+RT + ++ +F + VG KYLR +HLND+KS GS +DRH ++G+G + Sbjct: 320 HLFAAGYDIRTTEQFDEVMKEFDKVVGLKYLRAVHLNDSKSDLGSGLDRHENIGKGKLSE 379 Query: 242 DAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQT 280 FR+I+ F +P+ILET N +++ +E+ + + Sbjct: 380 QTFRFIVNSPYFKNMPIILETPVPEGNEEVYKQEVKLMYSLLE 422 >UniRef50_A6TBP4 Probable endonuclease 4 n=9 Tax=cellular organisms RepID=END4_KLEP7 Length = 284 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 246/279 (88%), Positives = 259/279 (92%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MKY+GAHVSA+GGLANAAIRAAEI+ATAFALFTKNQRQWRAAPL+ +TI EFKAACEKYH Sbjct: 1 MKYVGAHVSASGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLSDETIAEFKAACEKYH 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + QILPHDSYLINLGHPV EALEKSRDAFIDEM RC+QLGL+LLNFHPGSHL QI EE Sbjct: 61 FGPGQILPHDSYLINLGHPVEEALEKSRDAFIDEMTRCQQLGLTLLNFHPGSHLQQIPEE 120 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +CLARIAESINIAL KT+GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT Sbjct: 121 ECLARIAESINIALAKTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLR+ CEKTFA F R VGF+YLRGMHLNDAKS FGSRVDRHHSLGEGNIG Sbjct: 181 CHAFAAGYDLRSAEACEKTFAAFERIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG 240 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 HD F WIMQD RFDGIPLILETINPDIWAEEIAWL+AQQ Sbjct: 241 HDCFSWIMQDSRFDGIPLILETINPDIWAEEIAWLRAQQ 279 >UniRef50_B6KKD5 Endonuclease V, putative n=4 Tax=Eukaryota RepID=B6KKD5_TOXGO Length = 667 Score = 320 bits (821), Expect = 3e-86, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 178/287 (62%), Gaps = 7/287 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAH+SAAGG+ NA + I AFA F KNQR+W + P++ ++ D FKA K Sbjct: 381 KFLGAHISAAGGVQNAPVNCLAIGGQAFAFFLKNQRRWDSPPISDESADGFKAEVAKLKL 440 Query: 62 -TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ILPH SYLINL +P + S +AF+D++QRCEQ+G+ FHPGS + Q ++E Sbjct: 441 DGPEHILPHGSYLINLANPDAAKRKVSYNAFLDDLQRCEQIGVHRYVFHPGSTVGQCTKE 500 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + IAE +N A+ T+ VT ++EN AGQ + L +FE L II V+ K R+GVC+DT Sbjct: 501 ESIRHIAECLNKAIAATKSVTILLENMAGQKNVLCSEFEDLRDIIALVDRKDRIGVCLDT 560 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH ++AG+D++T + E F VG KYL+ MH+ND+K+ GS +DRH LG+G +G Sbjct: 561 CHLYSAGHDIKTEEKFEAVMKKFDSIVGMKYLKAMHINDSKAPLGSGLDRHEHLGKGTLG 620 Query: 241 HDAFRWIMQDD-RFDGIPLILETIN-----PDIWAEEIAWLKAQQTE 281 F++IMQ F +PL+LET + P +W +E + E Sbjct: 621 MAPFKFIMQHPTWFKDMPLVLETPDVDNSGPAMWRKETEMMYKFIEE 667 >UniRef50_B8CSD8 Endonuclease IV n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CSD8_SHEPW Length = 284 Score = 316 bits (810), Expect = 6e-85, Method: Composition-based stats. Identities = 172/279 (61%), Positives = 207/279 (74%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHVSA+GG+ANA + AA I A AFALFTKNQR+W + PL I F+ C + + + Sbjct: 6 LIGAHVSASGGIANAPLNAASIGANAFALFTKNQRRWVSKPLDEAQIALFQQNCAEANIS 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPHDSYLINLGHP E L KSR+AF DE+ RCEQ+GL+LLNFHPGSHL QI + C Sbjct: 66 MDAILPHDSYLINLGHPDDELLTKSREAFYDEIARCEQIGLTLLNFHPGSHLRQIDTDKC 125 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L+RI+ESIN AL ++ VTAVIENTAGQGSNLG FE LA IIDGVEDKSRVG+CIDTCH Sbjct: 126 LSRISESINFALSQSTTVTAVIENTAGQGSNLGHSFEQLAQIIDGVEDKSRVGICIDTCH 185 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGYD+R+ A C F F + VG +YL+ MHLND+K+ SRVDRH SLG+G IG + Sbjct: 186 MFAAGYDIRSQASCLSAFDLFDKVVGNRYLKAMHLNDSKTKLNSRVDRHESLGKGEIGAE 245 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 AF +M + GIPLILET + D+WA EI WL++ + Sbjct: 246 AFSTLMTLEAVKGIPLILETTDADLWAAEINWLRSLVPK 284 >UniRef50_A8KBF9 LOC100127659 protein n=7 Tax=Euteleostomi RepID=A8KBF9_XENTR Length = 363 Score = 314 bits (806), Expect = 2e-84, Method: Composition-based stats. Identities = 124/278 (44%), Positives = 181/278 (65%), Gaps = 1/278 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA + A +I A+A +F +QR W++ L + + F+ C++ + Sbjct: 72 KFVGAHVSIQGGIWNAVLVARQIGASAIGMFLGSQRTWKSKALDDKAAERFQRTCKELGF 131 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S ILPH YL+NLG P + L+KS+ +DE+ +C QLGL++ N HPGS + +S Sbjct: 132 KSRYILPHSPYLMNLGSPKPDVLQKSQAMLVDELHKCHQLGLTMYNIHPGSCVGAMSVSK 191 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 CL IA+ IN+A + GV V+EN + QGS +G +FE L IID V DKSR+GVC+DTC Sbjct: 192 CLELIADGINLAHAQVPGVIVVLENMSCQGSTVGGRFEELRGIIDLVVDKSRIGVCLDTC 251 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAFAAG+DL A E +F + VG +L+ +HLND++ G ++DRH ++G G+IG Sbjct: 252 HAFAAGHDLSKKAGLEHMLDEFNKVVGLSFLKAIHLNDSQGELGCKLDRHENIGHGHIGL 311 Query: 242 DAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQ 278 + FR +M + RF+GIP+ILET + D A+EI L + Sbjct: 312 EGFRHVMNEPRFNGIPMILETPLSSDDHAKEIELLYSL 349 >UniRef50_Q10002 DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Eumetazoa RepID=APN1_CAEEL Length = 396 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 126/277 (45%), Positives = 180/277 (64%), Gaps = 1/277 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVSAAGGL A A +FA+F +NQR W P++ + ++ + A + ++ Sbjct: 118 KMLGFHVSAAGGLEQAIYNARAEGCRSFAMFVRNQRTWNHKPMSEEVVENWWKAVRETNF 177 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 QI+PH SYL+N G P E LEKSR A +DE QR E+LG+++ NFHPGS + + +E+ Sbjct: 178 PLDQIVPHGSYLMNAGSPEAEKLEKSRLAMLDECQRAEKLGITMYNFHPGSTVGKCEKEE 237 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 C+ IAE+I+ ++KT+ + V+E AGQG+++G FE L IID V+ KSRVGVCIDTC Sbjct: 238 CMTTIAETIDFVVEKTENIILVLETMAGQGNSIGGTFEELKFIIDKVKVKSRVGVCIDTC 297 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA GYD+RT E+ +F VG+ YL+ +H+ND+K GS++DRH +G+G IG Sbjct: 298 HIFAGGYDIRTQKAYEEVMKNFGEVVGWNYLKAIHINDSKGDVGSKLDRHEHIGQGKIGK 357 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 AF +M D+R DGIP+ILET + EE+ + Sbjct: 358 AAFELLMNDNRLDGIPMILETP-EGKYPEEMMIMYNM 393 >UniRef50_Q8IE02 Apurinic/apyrimidinic endonuclease Apn1 n=15 Tax=cellular organisms RepID=Q8IE02_PLAF7 Length = 597 Score = 311 bits (796), Expect = 2e-83, Method: Composition-based stats. Identities = 130/285 (45%), Positives = 185/285 (64%), Gaps = 4/285 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 Y+GAH+SA+GG+ NA I + I AFALF KNQR+W +A LT + I +F+ C+KY++ Sbjct: 313 VYLGAHISASGGVQNAPINSFNISGLAFALFLKNQRKWESAALTNENIKQFEENCKKYNF 372 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SYLINL +P E +KS +F+D+++RCEQL + L NFHPGS + Q + ++ Sbjct: 373 DKNFILPHGSYLINLANPDKEKRDKSYLSFLDDIKRCEQLNIKLYNFHPGSTVGQCTVDE 432 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + +A+ IN +T V V+EN+AGQ +++G KFEHL II+ V DK R+GVC+DTC Sbjct: 433 GIKNVADCINKVHKETNNVIIVLENSAGQKNSVGSKFEHLRDIINLVHDKDRIGVCLDTC 492 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY+++T + F V KYL+ +HLND+KS GS +DRH ++G+G + Sbjct: 493 HTFAAGYNIKTFENFDNVMKQFDDIVNVKYLKAVHLNDSKSDIGSGLDRHENIGKGKLTM 552 Query: 242 DAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEK 282 D F++IM+ F IP+ILET + I+ EI L EK Sbjct: 553 DTFKYIMKSKYFKNIPIILETPDITNDESIYKYEIQNLYKLYFEK 597 >UniRef50_D1C4C4 Apurinic endonuclease Apn1 n=2 Tax=Bacteria RepID=D1C4C4_SPHTD Length = 288 Score = 306 bits (783), Expect = 7e-82, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 165/282 (58%), Gaps = 5/282 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S AGG+ A RA ++D A +FTKN QW A P+ + ++ F+ E+ Sbjct: 1 MLLFGAHMSIAGGVDKAIDRAEKVDCDAVQIFTKNNNQWNAKPIPPEQVERFQQRQEEAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINL P EKS DAF E++RCE LG+ L HPGSH E+ Sbjct: 61 IR--AVVAHDSYLINLASPDDALWEKSIDAFRVELERCELLGVPYLVTHPGSHTG-AGED 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + R+A+++N G V ++E TAGQGS LG++FE L AI+D V + RVG C Sbjct: 118 FGIQRVADALNRIHIDLPGYRVMTLLEITAGQGSALGYRFEQLRAIVDRVAEPERVGYCF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGY+LRTP +T F R +G LR +HLND+K GSRVDRH +G G Sbjct: 178 DTCHAFAAGYELRTPEGYAETMDAFDRILGLANLRALHLNDSKRELGSRVDRHDHIGAGM 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 IG F ++ D R +G+P +LET D E+ L ++ Sbjct: 238 IGLAGFHNVVNDPRLEGLPGLLETPKSDDLHEDAENLARLRS 279 >UniRef50_C5DGG3 KLTH0D05104p n=2 Tax=Saccharomycetaceae RepID=C5DGG3_LACTC Length = 405 Score = 303 bits (775), Expect = 6e-81, Method: Composition-based stats. Identities = 120/277 (43%), Positives = 171/277 (61%), Gaps = 4/277 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S AGG++N+ A I AFA+F K+ R+W + T + ID+FK C++ Y Sbjct: 60 KFGAHISTAGGISNSVTNAYNIGCNAFAMFLKSPRKWVSPDYTQEEIDKFKQKCKELGYN 119 Query: 63 SA-QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH Y INL +P E EKS +FID+++RCEQLG+ L NFHPGS L + + Sbjct: 120 PLTDVLPHGQYFINLANPEPEKAEKSYASFIDDLKRCEQLGVGLYNFHPGSSL-KGNHAK 178 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L ++A IN A+ +T+ V V+EN AG GS +G + L +ID VE+K RVGVC+DTC Sbjct: 179 QLRQLASYINKAIAETKFVKIVLENMAGTGSLVGSDLQDLKDVIDMVENKDRVGVCVDTC 238 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+ + +K + F +TVGFKYL +HLND+K+ + D H LG+G +G Sbjct: 239 HTFAAGYDISSKDSYDKFWQTFDKTVGFKYLSAIHLNDSKAPLAANRDLHEKLGQGFLGL 298 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLK 276 + F+ + + GIP+ILET + + EI L+ Sbjct: 299 EVFKLVANSEFLRGIPVILETPHTKDEGYGHEIKLLE 335 >UniRef50_Q5CT26 AP endonuclease of the TIM barrel fold, possible bacterial horizontal transfer (Fragment) n=4 Tax=cellular organisms RepID=Q5CT26_CRYPV Length = 364 Score = 303 bits (775), Expect = 7e-81, Method: Composition-based stats. Identities = 134/285 (47%), Positives = 184/285 (64%), Gaps = 6/285 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVSA+GG+ + + I AF++F K R W A PL QTID FK CE Sbjct: 79 KFVGAHVSASGGVDKSVNNSMNIAGMAFSMFLKPSRGWNAPPLKQQTIDLFKKNCETNKI 138 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + +PH SYLINLG+P E K AF DE++RC+ LG+ L NFHPGS + Q S+E Sbjct: 139 EYCKFCIPHGSYLINLGNPDEEKRSKMYGAFEDELKRCDALGIKLYNFHPGSTVGQCSKE 198 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + I++ IN A ++T+ V V+EN A +G++F+ L+ II+ V+DKSR+GVC+DT Sbjct: 199 ESIQFISDCINKAHEQTKSVITVLENCAESK-CVGYRFKELSEIIERVKDKSRIGVCLDT 257 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+RT K +F +G KYL+ MHLND+K F S +DRH +LG+GNIG Sbjct: 258 CHLFAAGYDVRTAESFNKVMVEFEAVIGLKYLKAMHLNDSKGQFNSGLDRHENLGKGNIG 317 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDI----WAEEIAWLKAQQTE 281 + F++IM D RF+ IPLILET +P+ + +EIA L E Sbjct: 318 MECFKFIMNDSRFNDIPLILETPDPNNDDKVYKKEIAILYDMLVE 362 >UniRef50_D2VNP8 Endonuclease n=1 Tax=Naegleria gruberi RepID=D2VNP8_NAEGR Length = 462 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 136/285 (47%), Positives = 183/285 (64%), Gaps = 3/285 (1%) Query: 2 KYIGAHVSA-AGGLANAAIRAAEIDA-TAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 +IG HVS + G+ A I A E FA F NQ+ + T + + F C+KY Sbjct: 171 LFIGCHVSYGSKGVETAPIAAYETGCYGGFAFFLGNQKTYSQKEYTDKMVSTFIENCKKY 230 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 +Y +LPH SYLINL +P LEKS+ F+ E Q+CE+LG NFHPGS + + Sbjct: 231 NYDPKNLLPHASYLINLANPDQTKLEKSKTLFLSEYQKCERLGAVRYNFHPGSTVGATTL 290 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E +IAE IN A ++T GV +V+E TAG G ++G KFEHL IID VEDK+RVGVC+D Sbjct: 291 EAGCKQIAECINWANEQTVGVCSVLECTAGGGHSIGHKFEHLKMIIDHVEDKNRVGVCLD 350 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYDLRT CEK F +F VGFKYL+GMHLND+K G++ DRH +LG+G++ Sbjct: 351 TCHMFAAGYDLRTQEGCEKVFNEFDEIVGFKYLKGMHLNDSKVKLGTKKDRHENLGKGHL 410 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 G + F++I+ ++ F IP++LET ++A+EI L + EK V Sbjct: 411 GIEVFKYIVNNENFRNIPMVLETP-EGLYADEIQELYSYYNEKEV 454 >UniRef50_Q966U0 Endonuclease 4 homolog n=5 Tax=cellular organisms RepID=END4_DICDI Length = 542 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 129/280 (46%), Positives = 181/280 (64%), Gaps = 2/280 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG HVS G A A FT R W+ + +FK +C+ ++ Sbjct: 261 VKIGGHVSIKNGYPTLIQSVVAQGFKAVAFFTNPPRTWKHHTVKLDDSIKFKQSCKSLNF 320 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SY +NLG P E L+KSRD I EM+ CE LG+ NFHPGSHL +ISE + Sbjct: 321 DVNCILPHGSYFLNLGSPNKENLQKSRDLMIHEMKNCEILGVKHFNFHPGSHLNEISESE 380 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + +AES++ L++T+ V AVIE TAGQG+NLG+ FEHL +I V+DK+RVGVC+DTC Sbjct: 381 SIKIVAESLDYILERTKDVVAVIECTAGQGTNLGYTFEHLRDMIALVKDKTRVGVCLDTC 440 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY++ T + C+ F +F + VGFKYL+G+HLND+KST GS++DRH ++G+G+IG Sbjct: 441 HMFAAGYNISTKSNCDVIFQEFDKVVGFKYLKGVHLNDSKSTCGSKLDRHENIGKGHIGT 500 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 F++++ D RF IP+ILET+ P + +E+ L + + Sbjct: 501 PCFKYLVNDKRFQNIPMILETVGP--YDQEVKLLYSFIED 538 >UniRef50_Q5KCJ9 DNA-(Apurinic or apyrimidinic site) lyase, putative n=4 Tax=cellular organisms RepID=Q5KCJ9_CRYNE Length = 463 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 172/294 (58%), Gaps = 15/294 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK--- 58 +GAHVSAAGG A A +RA A ALF K+QRQW++ P +T+ FK + Sbjct: 115 MLLGAHVSAAGGPATALLRAGLAGANGLALFVKSQRQWKSKPYEDETVQRFKELMKSKEE 174 Query: 59 --YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 Y IL H SYLINLG+P + S + F D++ RC QLG+ L N+HPGS + Sbjct: 175 GGMGYGPESILVHGSYLINLGNPDPAKWKVSYECFKDDIARCHQLGIKLYNWHPGSTVGA 234 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNL-GFKFEHLAAIIDGVEDKSRVG 175 ++E+ A IA++IN V VIEN A GSN+ G + L++II VEDKSRV Sbjct: 235 CTKEESFALIAKAINQVHKDVPEVITVIENMANAGSNIVGTAWSDLSSIIKLVEDKSRVR 294 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 VCIDTCH FAAGYD+RTP +T F VG KYL G+HLND+K+ G+ D H ++G Sbjct: 295 VCIDTCHTFAAGYDIRTPETYAETMKRFDEVVGNKYLAGVHLNDSKANLGANKDLHENIG 354 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILETINPD---------IWAEEIAWLKAQQT 280 G IG AFR IM+D GIPL+LET PD IW +EIA L Q Sbjct: 355 LGEIGLTAFRCIMRDPLMTGIPLVLETPAPDAPTPAEHLSIWTKEIALLYEIQA 408 >UniRef50_C0GRW0 Apurinic endonuclease Apn1 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRW0_9DELT Length = 290 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 108/285 (37%), Positives = 161/285 (56%), Gaps = 10/285 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 Y+GAH S +GGL A R + TA +FT+NQRQW+ +P+ Q ++F+ A +++ Sbjct: 6 YLGAHCSVSGGLYRAVERIEGLSGTALQIFTRNQRQWKTSPVKEQEAEQFRQALQQWGDY 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + HDSYLINL P E L+KS AF E++RC LG+ L HPG+H Q + Sbjct: 66 P--VFSHDSYLINLASPDREILKKSVQAFAGELKRCALLGIPGLVTHPGAHKGQ-GLDKG 122 Query: 123 LARIAESINIALD-------KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVG 175 L +++ ALD ++ V ++E T+GQG+ LG F+ L II ++ R+G Sbjct: 123 LQAYVRALDEALDLALQQCPESADVEVLLETTSGQGTVLGSTFQELDFIISTSKNSDRLG 182 Query: 176 VCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 VC DTCH FAAGYD+RT T TVG + ++ +HLND+ GSR DRH +G Sbjct: 183 VCFDTCHVFAAGYDMRTRESYNATMQTLDSTVGLQRVQAVHLNDSSYGLGSRGDRHEHIG 242 Query: 236 EGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 +G +G + FR ++ D RF +P+++ET ++A L + Sbjct: 243 KGEMGLEPFRLVLNDPRFYDVPMVIETPKDKAGKWDLANLNLLRG 287 >UniRef50_P22936 DNA-(apurinic or apyrimidinic site) lyase 1 n=20 Tax=Saccharomycetales RepID=APN1_YEAST Length = 367 Score = 297 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 118/288 (40%), Positives = 172/288 (59%), Gaps = 7/288 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S AGG++N+ A +FA+F K+ R+W + T + ID+FK C Y+Y Sbjct: 16 KFGAHMSGAGGISNSVTNAFNTGCNSFAMFLKSPRKWVSPQYTQEEIDKFKKNCATYNYN 75 Query: 63 SA-QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH Y INL +P E EKS ++F+D++ RCEQLG+ L N HPGS L + + Sbjct: 76 PLTDVLPHGQYFINLANPDREKAEKSYESFMDDLNRCEQLGIGLYNLHPGSTL-KGDHQL 134 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L ++A +N A+ +T+ V V+EN AG G+ +G L +I +EDKSR+GVCIDTC Sbjct: 135 QLKQLASYLNKAIKETKFVKIVLENMAGTGNLVGSSLVDLKEVIGMIEDKSRIGVCIDTC 194 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+ T + +F +GFKYL +HLND+K+ G+ D H LG+G +G Sbjct: 195 HTFAAGYDISTTETFNNFWKEFNDVIGFKYLSAVHLNDSKAPLGANRDLHERLGQGYLGI 254 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEI---AWLKAQQTEKAV 284 D FR I + GIP++LET N + + EI WL+++ + + Sbjct: 255 DVFRMIAHSEYLQGIPIVLETPYENDEGYGNEIKLMEWLESKSESELL 302 >UniRef50_B8G418 Probable endonuclease 4 n=12 Tax=Bacteria RepID=END4_CHLAD Length = 286 Score = 296 bits (759), Expect = 4e-79, Method: Composition-based stats. Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 8/283 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+S +GG++ + R + A +F KN+RQW A P++ + + F+A ++ Sbjct: 1 MPRFGAHMSISGGVSKSFARGESVGLDAMQIFAKNERQWTAKPISAEEMAAFQAEQQRTG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINL P + EKS AF DE++RC QL + L HPG+H I EE Sbjct: 61 IHP--VIVHDSYLINLAAPADDLREKSIVAFADELERCAQLKIPYLVTHPGAHTG-IGEE 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+A++I+ L + G ++E TAGQG+ LG++FEHLA + + + R+GVC+ Sbjct: 118 AGLVRVADAISRLLAEGVGGTTMILLETTAGQGTALGYRFEHLARLFELIPYHDRLGVCV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+R P + TFA+ R VG + ++ HLND++ GSRVDRH +G+G Sbjct: 178 DTCHIFAAGYDIRDPDTYDATFAELDRLVGLERVKCFHLNDSQKDLGSRVDRHAHIGQGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEE---IAWLKAQ 278 IG +AFR ++ D RF +P+I+ET + AE+ +A L++ Sbjct: 238 IGTEAFRLLVNDPRFAHLPMIIETPKGEDMAEDRMNLALLRSL 280 >UniRef50_C8V628 Major apurinic/apyrimidinic endonuclease (Eurofung) n=5 Tax=Eurotiomycetidae RepID=C8V628_EMENI Length = 544 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 116/286 (40%), Positives = 171/286 (59%), Gaps = 4/286 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++GAHVSAAGG+ NA + + AFALF K+QR+W PL + D F C+++ Y Sbjct: 133 MFVGAHVSAAGGVFNAVNNSKHVGGNAFALFLKSQRKWDNPPLQDEHRDNFVKLCKEHDY 192 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +A+ +LPH SYL+NL +++ DAF+D+++RCE LG+ L NFHPGS + Sbjct: 193 DAAKYVLPHGSYLVNLAQEDEAKAKQAYDAFLDDLRRCEALGIRLYNFHPGST-NKTPLS 251 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVGVCI 178 LAR+A+++ AL T V V+E G GS +G ++ + SR+GVCI Sbjct: 252 SALARLAKALTNALAATSNVVPVLETMCGHGSTIGGSLSEFRDLLALIPKEYHSRIGVCI 311 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH+FAAGYDL +PA + +F +G ++LR +HLND+K+ GS+ D H ++G G Sbjct: 312 DTCHSFAAGYDLVSPAGFQAFLKEFEDLIGIQHLRALHLNDSKAPGGSKRDLHANIGTGF 371 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 +G AF +M + RF+G+P+ILET I A K + E+ V Sbjct: 372 LGLRAFHNVMNEPRFEGLPMILETPIDRIPAAATNRAKQEAAEEDV 417 >UniRef50_A1WXM0 Probable endonuclease 4 n=2 Tax=Ectothiorhodospiraceae RepID=END4_HALHL Length = 297 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 122/281 (43%), Positives = 160/281 (56%), Gaps = 7/281 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVSAAGG A R EI LFT+NQR W+ P+ D F+ A ++ Sbjct: 1 MPEIGAHVSAAGGPQRAPERGGEIGCDCMQLFTRNQRSWKVKPIAPGEADAFRRARAEHG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H SYLINL E KS+ A E++RC QLG+ LLNFHPG+HL + E Sbjct: 61 IG--AVMSHASYLINLAATDPEKHAKSQTALEAELERCHQLGIELLNFHPGAHL-EAGIE 117 Query: 121 DCLARIAESINIALDKTQG---VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + IA ++N V V+EN AGQGS +G F LAAI++ +E R GVC Sbjct: 118 AGIETIAATLNAICRNHPDKTDVCLVLENVAGQGSTVGADFAELAAILERLETPERFGVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DT HAFAAGY+L T A + +A F +G L +HLND++ GSR DRH +G G Sbjct: 178 VDTAHAFAAGYELHTAAGWDAMWAAFDDHIGLNRLVALHLNDSRPPCGSRKDRHALIGRG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKA 277 IG +AFR + D R +P +LET P+ WA+EI WL+ Sbjct: 238 EIGPEAFRRAVTDPRTASLPQMLETPAGPEGWAQEIDWLRG 278 >UniRef50_A6CAW7 Xylose isomerase-like TIM barrel n=2 Tax=Planctomycetaceae RepID=A6CAW7_9PLAN Length = 285 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 117/285 (41%), Positives = 159/285 (55%), Gaps = 10/285 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAH S AGG A AAE + +FTKN QWRA PLT + I+ F+ E Sbjct: 1 MPLLGAHQSIAGGYYKAVDTAAEFEMDCVQIFTKNNNQWRAKPLTDKDINLFREHLESTG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H SYLINL P E KS DA + E+QR E LGL HPGS + SEE Sbjct: 61 VGRP--CSHMSYLINLASPKEELWNKSIDAVVVELQRAEALGLEGAVMHPGSFVTS-SEE 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L RI +I+ +T+G +E TAGQGSNLGF+FE LA +++ V+D R+G+C+ Sbjct: 118 EGLDRIVAAIDRIHQETEGFQTQIWLETTAGQGSNLGFRFEQLAYLLNQVQDGGRLGICV 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGY L +E + T ++ + +GF + HLND+K FGSR DRH ++G G Sbjct: 178 DTCHIFAAGYPLIKKSEYKATMSELDQVIGFDRICAFHLNDSKCEFGSRKDRHENIGRGC 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWA-----EEIAWLKAQ 278 +G + FR ++ D F P+ LET + + L++ Sbjct: 238 LGLEPFRHLLNDPVFQDRPMYLETPKDEEDGVPLDQINMQTLRSL 282 >UniRef50_A9B5N7 Probable endonuclease 4 n=16 Tax=Bacteria RepID=END4_HERA2 Length = 293 Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 156/282 (55%), Gaps = 5/282 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +GAHVS GGL A RA +FTK+QRQW A PLT F+AA Sbjct: 1 MPNLGAHVSTVGGLQTAFERAQATTCHVIQIFTKSQRQWNAKPLTAADCANFQAAHRDAG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ HDSYLINLG P EKS AF E++RC+QLG+ L HPG+H+ E Sbjct: 61 MPP--LIAHDSYLINLGSPDNGLWEKSIAAFRVELERCQQLGVGSLVTHPGAHVGS-GEA 117 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L R+ ++ L + G ++E TAGQG+ LG FEHLA +I+ + R+G+C Sbjct: 118 AGLDRVGAALRRLLAEDVGGETQILLEITAGQGTALGHSFEHLARLIELCDGHPRLGICF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH AAGYD RT + TF F R +G LR HLND+K+ GSRVDRH +GEG Sbjct: 178 DTCHGLAAGYDFRTAEGYQTTFDHFDRLIGIDRLRAFHLNDSKNDLGSRVDRHTHIGEGF 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 +G + F IM D RF IP+ LET + +I L + Sbjct: 238 VGLEGFELIMNDPRFQTIPMALETPKEPDESADIRNLATLRG 279 >UniRef50_D1Z7I7 Whole genome shotgun sequence assembly, scaffold_7 n=10 Tax=Sordariomyceta RepID=D1Z7I7_SORMA Length = 500 Score = 291 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 124/292 (42%), Positives = 170/292 (58%), Gaps = 16/292 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIGAHVS+AGG+ N+ A I A AFA+F K+QR+W + PL F+ + Y Sbjct: 124 LYIGAHVSSAGGVQNSITNALHIGANAFAVFLKSQRKWVSPPLEPSAASSFRDLASLHSY 183 Query: 62 T-SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + +LPH SYL+NL +++ F+D++QRC LG+ L NFHPGS + E Sbjct: 184 SVGEHVLPHGSYLVNLAQIDKTKADQAYANFVDDLQRCATLGIKLYNFHPGSTGGEP-IE 242 Query: 121 DCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + ARIA +N A + T VIEN G G+ +G +FE L I+DGVEDKSRVGVCI Sbjct: 243 EACARIASQLNRAHKEKGTGETVTVIENMCGSGNVIGSRFEELKMIVDGVEDKSRVGVCI 302 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAG+DLRTP +T F VG YL+ +HLND+K+ FGS D H ++G G Sbjct: 303 DTCHAFAAGHDLRTPEAFAETLKRFDEIVGLGYLKALHLNDSKAPFGSHRDLHANIGTGF 362 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI------------WAEEIAWLKAQ 278 +G AF ++ + +P++LET + WA+EI L++ Sbjct: 363 LGLRAFHNLVNCEAVQRLPMVLETPIEEKGADGKMVENKQVWADEIKLLESL 414 >UniRef50_C1Z9J8 Endonuclease IV n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9J8_PLALI Length = 291 Score = 291 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 155/284 (54%), Gaps = 5/284 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S AGG A + LFTKN QWR PLT I +F+ + + Sbjct: 6 LGAHMSIAGGCYKALEAGHRLGMGCVQLFTKNNNQWRGKPLTEDDIRQFQTTWKSTGIQA 65 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H SYLINL P KS DA +DE++R E LG+ + HPGS + + + E + Sbjct: 66 T--CAHASYLINLASPDDVLWNKSCDALVDELERAEALGIPGVVLHPGSAV-KSTPEAGI 122 Query: 124 ARIAESINIALDKTQGVT--AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 R+ E+++ K +G +E TAGQGS LG +FE L+ ++DGV + R+G+CIDTC Sbjct: 123 TRVIEALDDVHAKCKGFRAQVWLETTAGQGSCLGARFEELSQMLDGVREPDRIGICIDTC 182 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGY L T + T F++ +GF +R HLND+ GSRVDRH +GEG +G Sbjct: 183 HIFAAGYPLHTADDYADTLEKFSQKIGFDRVRAFHLNDSMKGLGSRVDRHAHIGEGQLGR 242 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA 285 F ++ DDR IP LET + ++ + Q ++ +A Sbjct: 243 IPFSRLLHDDRLSHIPKYLETEKGERDGVDLDLINLQTLQQLIA 286 >UniRef50_B3XXI6 Putative endonuclease n=1 Tax=uncultured bacterium RepID=B3XXI6_9BACT Length = 290 Score = 290 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 110/279 (39%), Positives = 148/279 (53%), Gaps = 8/279 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAH+SAAGG+ A RA E +FTK+ RQW+A PLT + ID ++ A +Y Sbjct: 1 MRIGAHISAAGGVYKAFARAREAGCETMLVFTKSNRQWKAKPLTEKDIDLYQQARAEYS- 59 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H SYLIN+ P + EKS A E++R L + + FHPGS + + E Sbjct: 60 DIDPVAVHASYLINIASPKDDLWEKSYQALKVEVERAGALDIPFITFHPGSFV-KSDAES 118 Query: 122 CLARIAESINIALDKT----QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 LARI + LD+T T +E AGQG+NLG+ FE LA ++DG+ R+G+C Sbjct: 119 GLARIITGVKRLLDETAVTAPNTTVCLETMAGQGTNLGYMFEQLATLLDGIGRGPRLGIC 178 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH FAAGYD+RTP T F +G ++ H ND+K G R DRH +G+G Sbjct: 179 FDTCHVFAAGYDIRTPEAYAATMQAFDNVIGLDQIKVFHFNDSKFELGQRKDRHAHIGDG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETIN--PDIWAEEIAW 274 IG + F M D R+ +ET D EI Sbjct: 239 FIGAEGFANFMNDPRWANHAAHIETPKTEKDDDGSEIEM 277 >UniRef50_B6QA11 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Trichocomaceae RepID=B6QA11_PENMQ Length = 562 Score = 289 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 110/269 (40%), Positives = 166/269 (61%), Gaps = 4/269 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++GAHVSAA G+ N+ + + I AFALF K+QR+W PL + ++F C Y Y Sbjct: 165 MFVGAHVSAAKGVQNSILNSVHIGGNAFALFLKSQRKWDNPPLQDEHKEQFLKFCRDYEY 224 Query: 62 TSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +A+ ILPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ Q + E Sbjct: 225 DAAKYILPHGSYLVNLAQEDETKAKQAYDSFLDDLKRCEKLGIRLYNFHPGAA-GQSTVE 283 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVGVCI 178 ++R+A+S+ AL T+ V V+E G G+ LG L A+I + SR+GVC+ Sbjct: 284 SAISRLAKSLTKALAATETVIPVLETMCGHGTTLGGDLSELGAVISQIPEQYHSRIGVCV 343 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH+F+ GYDL P + +F +G K+LR +HLND+K+ GS+ D H ++G G Sbjct: 344 DTCHSFSYGYDLVAPEGFKAFMQEFDEKIGLKFLRALHLNDSKAPKGSKRDLHANIGTGF 403 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDI 267 +G AF +M ++RF G+P+ILET Sbjct: 404 LGLRAFHNVMNEERFQGLPMILETPIDRP 432 >UniRef50_C4R5M7 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage n=3 Tax=Saccharomycetales RepID=C4R5M7_PICPG Length = 347 Score = 289 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 125/284 (44%), Positives = 182/284 (64%), Gaps = 5/284 (1%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GAH+S +GG++NA + I A +FALF K+ R+W + T +++FKA C++++Y Sbjct: 5 KFGAHISTSGGVSNAVTNSTNISAKSFALFLKSPRRWVSPMFTDDEVNKFKALCKEHNYN 64 Query: 63 S-AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S +ILPH SY INL +P E EK+ AF+D+++RCE L + L NFHPGS L ++ Sbjct: 65 SRTEILPHGSYFINLANPDLEKEEKAYGAFLDDLKRCELLDIGLYNFHPGSDLGSDH-QE 123 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L R+A++IN A+++T+ V VIEN AG G+ +G E + +ID V+DKSRVGVCIDTC Sbjct: 124 ALKRLAKNINTAINETKFVKIVIENMAGHGNLIGSDLEDIKTVIDMVDDKSRVGVCIDTC 183 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYD+R + + +T+GF+YL +HLND+K+ G+ D H +G G +G Sbjct: 184 HTFAAGYDIRDEESYNAFWELYDKTIGFEYLSAIHLNDSKAPLGANKDLHQKIGWGFLGL 243 Query: 242 DAFRWIMQDDRFDGIPLILETIN---PDIWAEEIAWLKAQQTEK 282 + FR I + GIPL+LET N P +W EEI L+ + + Sbjct: 244 EPFRLIANSEFLQGIPLVLETPNDNTPQLWEEEIKLLEWLEGKS 287 >UniRef50_B8N4I3 DNA (Apurinic or apyrimidinic site) lyase, endon uclease n=2 Tax=Eurotiomycetidae RepID=B8N4I3_ASPFN Length = 569 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 109/268 (40%), Positives = 163/268 (60%), Gaps = 4/268 (1%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVSAA G+ NA + I AFALF K+QR+W PL D F+ C + Y + Sbjct: 158 VGAHVSAAKGVFNAINNSMHIGGNAFALFLKSQRKWDNPPLQDDHRDNFRRLCIENKYDA 217 Query: 64 AQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ ILPH SYL+NL +++ D+F+D+++RCE LG++L NFHPGS Q + D Sbjct: 218 AKHILPHGSYLVNLAQEDKAKAKQAYDSFLDDLRRCEALGINLYNFHPGSA-NQSNFSDA 276 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVGVCIDT 180 L+R+A+++ AL T VT V+E G G+ +G K ++ + R+G+CIDT Sbjct: 277 LSRLAKALTNALAATSTVTPVLETMCGHGTTIGGKLTEFRDLLAMIPQEYHPRIGICIDT 336 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH+FAAGYDL +P + +F +G ++LR +HLND+K+ GS+ D H ++G G +G Sbjct: 337 CHSFAAGYDLASPEGFKAFMKEFEDVIGLQHLRALHLNDSKAPRGSKRDLHANIGTGFLG 396 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIW 268 AF +M + RF+G+P++LET Sbjct: 397 LRAFHNVMNEPRFEGLPMVLETPIDRPL 424 >UniRef50_B8CW79 Probable endonuclease 4 n=1 Tax=Halothermothrix orenii H 168 RepID=END4_HALOH Length = 278 Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 100/281 (35%), Positives = 143/281 (50%), Gaps = 4/281 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G HVS AGGL A RA +I A +F KN R W+ ++ I + K +K + Sbjct: 1 MRLGKHVSIAGGLYKATDRATKIGCNALQIFVKNPRGWKIKEVSDSEIKKLKDNIKKENM 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H SYLIN+ P E EKS ++ E +R E + HPGSH + Sbjct: 61 YP--LVVHSSYLINMATPRDELWEKSVNSLKKEYKRTELINADYFVVHPGSHTGK-GLHF 117 Query: 122 CLARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + RI E+IN + G ++EN AG GS++G F L II+ V+D +R+GVC+DT Sbjct: 118 GINRIIEAINSVFGEVKNGPQLLLENVAGAGSSIGSNFTELRDIINKVDDYARIGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDLR E+ DF + +G L+ +HLND+K S D H +GEG IG Sbjct: 178 CHAFAAGYDLRYEDGLEELLNDFDKIIGLDLLKVIHLNDSKYGLASNKDEHAHIGEGEIG 237 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 I+ P ILET +++ + + + Sbjct: 238 EKGISNIINHPLLKDKPFILETPKFSGRDKDVELVNLLRRD 278 >UniRef50_A3CT71 Probable endonuclease 4 n=3 Tax=Archaea RepID=END4_METMJ Length = 282 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 100/282 (35%), Positives = 141/282 (50%), Gaps = 7/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG + A RA + F +F++N R W+ L F+AA Sbjct: 1 MVLVGCHVSIAGSIDRAVGRALDAGCDTFQIFSRNPRGWKVKDLDPGLAGAFRAAVSASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL N P E EKS A E++RC LG+ L H G H E Sbjct: 61 IGP--VVDHMPYLPNPASPDAEIYEKSVAALAGELRRCSLLGIPYLVTHLGHHRG-AGME 117 Query: 121 DCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 R+ +IN A + V ++ENTAG+ +++G ++L+ I+DG++ K RVG+C Sbjct: 118 AGQERVVAAINRAFEDAGESDVMLLLENTAGEKNSVGTTVDNLSRIVDGIDAKERVGICF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGYDLRT + + + LR +HLND K GS +DRH +G G Sbjct: 178 DTCHAFAAGYDLRTAEGVDAVLGEIDDAIDLSRLRVVHLNDCKGDLGSGLDRHEHIGLGR 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQ 278 IG D FR I++ +PLI ET + IA ++ Sbjct: 238 IGEDGFRHILRHPAVRRLPLICETPVDERRSDTGNIAKVREL 279 >UniRef50_Q4YZM8 AP endonuclease 1, putative n=2 Tax=Plasmodium (Vinckeia) RepID=Q4YZM8_PLABE Length = 559 Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 117/238 (49%), Positives = 164/238 (68%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 Y+GAH+SA+GG+ NA I + + AFALF KNQR+W + PLT + I +F C+KY++ Sbjct: 224 VYLGAHISASGGVQNAPINSFNVSGLAFALFLKNQRKWESPPLTEENIKQFNENCKKYNF 283 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ILPH SYLINL +P E EKS +F+D+++RCEQL + L NFHPGS + S E Sbjct: 284 DKNLILPHGSYLINLANPDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQ 343 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + I++ IN A +T V V+EN+AGQ +++G KFEHL II ++DK R+GVC+DTC Sbjct: 344 GIKNISDCINRAHKETSNVIIVLENSAGQKNSIGSKFEHLRDIISQIDDKERIGVCLDTC 403 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 H FAAGYD+++ + E+ +F V KYL+ +HLND+KS GS +DRH ++G+GNI Sbjct: 404 HTFAAGYDIKSYEKFEEVMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGNI 461 >UniRef50_Q057Y5 Endonuclease IV n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057Y5_BUCCC Length = 290 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 138/278 (49%), Positives = 184/278 (66%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +KYIG H + +GGL + ++A +++ATAF+ F KN +W PL TI F+ C KY+ Sbjct: 2 IKYIGVHCNTSGGLEKSVLQANKLNATAFSFFVKNPLRWNTLPLQQSTIKSFRKFCNKYN 61 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 Y++ QILPH SYLINLGHP E +KS I+E+ C LGL ++N HPGS L +I+E+ Sbjct: 62 YSTLQILPHSSYLINLGHPDKEKKKKSCKTLIEEINFCNLLGLVMINIHPGSSLKKITEK 121 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 CL I+ SIN L KT + V+ENT+GQG N+G+ FEHLA II+ V +KSR+GVC+DT Sbjct: 122 KCLENISNSINYILKKTNNIIIVLENTSGQGGNMGYCFEHLAFIINKVRNKSRIGVCLDT 181 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FA+GY L F F +G KYLRG+HLND+K F S++DRH +LG GNI Sbjct: 182 CHLFASGYQLNNKNSFLNIFYRFHELIGLKYLRGIHLNDSKGKFNSKLDRHENLGYGNIK 241 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 F I++ F+ IP+ILET + IW +EI WLK Q Sbjct: 242 TSVFSKIVRVIEFNNIPIILETKDASIWKKEIQWLKKQ 279 >UniRef50_A9A555 Probable endonuclease 4 n=3 Tax=Thaumarchaeota RepID=END4_NITMS Length = 279 Score = 286 bits (731), Expect = 7e-76, Method: Composition-based stats. Identities = 102/279 (36%), Positives = 150/279 (53%), Gaps = 2/279 (0%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG HVS +G + + A E + +AF +FT+N R W A LT I FK+ ++ Sbjct: 1 MQIGCHVSISGSIDKSVDNAVERECSAFQIFTRNPRGWHAKTLTKDDITNFKSKLKESKI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 H YL NL P + EKS +DE++RC QLG+ L H GSHL EE Sbjct: 61 DRFATCAHMPYLPNLATPKEDGFEKSVKTLVDEVERCAQLGIPYLVTHLGSHLG-TGEEA 119 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + ++ + + A V ++ENTAGQ +++G F+ L I ++ + GVC+DTC Sbjct: 120 GIKKLVKGLTEAGKTKNDVMILLENTAGQKNSVGSDFKQLGEIFKQLKPAKKFGVCLDTC 179 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAF GYDLRT A+ ++TF++F + VG L+ +HLNDAK G +DRH+ LG G IG Sbjct: 180 HAFVFGYDLRTEAKVKETFSEFDKYVGIDNLKILHLNDAKGDLGCNLDRHYHLGMGGIGE 239 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 I++ IP+ILET D ++ ++ + Sbjct: 240 KGISAIVKFANKKKIPIILETP-IDDDRDDFENIRKAKE 277 >UniRef50_B2TL64 Probable endonuclease 4 n=34 Tax=Bacteria RepID=END4_CLOBB Length = 277 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 6/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G N A +I A F FT+N R +A + + EF ++ + Sbjct: 1 MLNIGCHLSSSKGFKNMGENALKIGANTFQFFTRNPRGSKAKDIDENDVKEFLELAKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + +IL H Y +N E + + D+++R E L +L NFHPGSH+ Q + E Sbjct: 61 F--CKILAHAPYTLNACSADERNREFAIEIMADDLKRMEYLPNNLYNFHPGSHVKQGT-E 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I+ ++N L K Q ++E +G+G+ +G FE +A II VE K VGVC+DT Sbjct: 118 VGIEYISSALNSILKKDQTTKVLLETMSGKGTEVGRNFEEIAEIIKRVELKEHVGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH AGYD+ E +K +F +G L +HLND+K+ F S DRH ++G G IG Sbjct: 178 CHIHDAGYDIVN--ELDKVLEEFNSIIGLDKLDAIHLNDSKNPFESHKDRHETIGNGYIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 +A I+ + +P LET N + + EI LK+ + Sbjct: 236 LEAVTNIINHPKLCHLPFFLETPNELEGYKNEIELLKSAYKK 277 >UniRef50_D2R2R9 Apurinic endonuclease Apn1 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R9_9PLAN Length = 321 Score = 282 bits (723), Expect = 6e-75, Method: Composition-based stats. Identities = 121/308 (39%), Positives = 161/308 (52%), Gaps = 33/308 (10%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQ-------------------------- 36 +GAH+S AGGL AA AA + +FT + Sbjct: 14 LLGAHMSIAGGLHKAAEAAANVRCDVVQIFTGSPSQWPFVQASRAKKTDVQFDGLLTKNN 73 Query: 37 RQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQ 96 QWRA ++ + +FK A ++ T L H SYLINL P E +KS +A + E+ Sbjct: 74 NQWRAKAISDKEEQQFKEALARHKITLP--LAHASYLINLASPDEELWQKSIEAMVIELG 131 Query: 97 RCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNL 154 R QLG+ + HPGS SE LARIA +I+ T ++ENTAGQGSNL Sbjct: 132 RASQLGIFGVVMHPGSFTTS-SEAVGLARIAAAIDKIHTLAPDATAQILLENTAGQGSNL 190 Query: 155 GFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRG 214 G+KFEHL II V+ R+GVCIDTCH FAAGY L T E + TF VG +R Sbjct: 191 GWKFEHLGEIIAQVKQADRLGVCIDTCHTFAAGYPLGTKEEFDATFESLENAVGINRIRA 250 Query: 215 MHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAE--EI 272 HLND+K GSRVDRH +G+G +G + FR ++ D RF +P+ LET D E ++ Sbjct: 251 FHLNDSKKELGSRVDRHEHIGQGCLGLEPFRHLLNDKRFTKVPMYLETPKEDADEEPWDV 310 Query: 273 AWLKAQQT 280 L+ ++ Sbjct: 311 VNLRTLRS 318 >UniRef50_B3V640 Apurinic endonuclease Apn1 n=2 Tax=environmental samples RepID=B3V640_9ARCH Length = 280 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 100/280 (35%), Positives = 155/280 (55%), Gaps = 6/280 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G HVS AG + + RA ++ F ++T+N R W+ + L I FK+ + Sbjct: 1 MKLGVHVSIAGSIDLSVDRARSLNLNTFQIYTRNPRGWKFSDLKESNILNFKSKIISENI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + ++ H YL NL P + S + E++RC +LG+ + H GSHL E Sbjct: 61 --SAVVCHMPYLPNLSSPKDDLHNMSIVSLASELERCNKLGIDYVVTHIGSHLGS-GLEQ 117 Query: 122 CLARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L R+ ++ N A+ D ++ENTAG +N+G KFE L I D ++DKSR+G C DT Sbjct: 118 GLNRVVKACNTAMSDSANNTMIILENTAGTKNNVGSKFEELKYIFDNIKDKSRIGFCFDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAGYDL + T F + +G KYL+ +HLND+K G+ +DRH +G+G+IG Sbjct: 178 CHAFAAGYDLSSRKSVIDTLDQFNKIIGMKYLKVVHLNDSKGELGNGLDRHQHIGKGHIG 237 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQ 278 + FR ++++ +PLILET + +E I +++ Sbjct: 238 EEGFRQLLKNPDIKQLPLILETPIDENIGDSENIEKIRSF 277 >UniRef50_Q189A4 Probable endonuclease 4 n=17 Tax=cellular organisms RepID=END4_CLOD6 Length = 278 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 94/283 (33%), Positives = 155/283 (54%), Gaps = 6/283 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G H+S A G ANAA A I A F F++N R A + I +F+ ++ + Sbjct: 1 MIKLGTHLSIAKGFANAAETAVYIGANTFQFFSRNPRGGNAKEFDEKDIIKFQEIRKENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A +L H Y +NLG + E + ++++R + LG+ + FHPGSH+ + Sbjct: 61 F--APLLAHAPYTMNLGGTKDDVYEFATRVIDEDIRRMDSLGIEYMCFHPGSHVG-GGVD 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + RI + +N A+ + +T ++E +G+G+ +GFKFE L +IID +E K ++GVC+DT Sbjct: 118 FGIDRIVKGLNNAIKGDENITILLETMSGKGTEIGFKFEQLKSIIDKIEHKEKIGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F+AGYD+ + + +F + +G + L+ +HLND+ FG + DRH +GEG IG Sbjct: 178 CHIFSAGYDIVN--DLDGVLEEFDKVIGIERLKTVHLNDSMMPFGDKKDRHAPIGEGKIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEK 282 A M+ +P LET + + E+ +K + K Sbjct: 236 LKALIDFMEHPSLKHLPFFLETPFDDEGHKRELKMIKEILSSK 278 >UniRef50_B2VTW7 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VTW7_PYRTR Length = 471 Score = 281 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 119/291 (40%), Positives = 167/291 (57%), Gaps = 21/291 (7%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAHVS AG + A AFA+F KNQR+W + + + +D F CE + Sbjct: 124 RIGAHVSIAG-----VAKTDLTSANAFAMFMKNQRKWESKDIDQEHVDFFVKWCEDHKIN 178 Query: 63 SA-QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A LPH SYL+NL HP ++S D+F++++ RC +LG+ L NFHPG + + E+ Sbjct: 179 AAECCLPHGSYLVNLAHPDPAHKKQSYDSFLNDLSRCHRLGIRLYNFHPG-NSNATTREE 237 Query: 122 CLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + I+E+IN A + V V+E A G+ +G F +AAII V DKSRVGVC+D Sbjct: 238 GIITISENINQAHADPASGKVVTVLETMASLGNTIGGNFTDIAAIIRLVNDKSRVGVCLD 297 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYDLRTP KT F + +G +YL+ H+ND+K+ F S D H +G G + Sbjct: 298 TCHVFAAGYDLRTPEAYAKTIDKFDKEIGLEYLKAFHVNDSKAPFSSHRDVHARIGTGYL 357 Query: 240 GHDAFRWIMQDDRFDGIPLILETI------------NPDIWAEEIAWLKAQ 278 G AF +M D+RF G+P++LET + WA EI L++ Sbjct: 358 GLQAFHNLMNDERFHGLPMVLETPCDTLDADGKKVEDKGSWAREIKMLESL 408 >UniRef50_A9BJ15 Probable endonuclease 4 n=7 Tax=Thermotogaceae RepID=END4_PETMO Length = 287 Score = 281 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 153/284 (53%), Gaps = 4/284 (1%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G A I F +FT + R W+ P ++ FK A +++ Sbjct: 1 MIKIGAHMKISKGFTKVPPDTANIGGNTFQIFTSSPRVWKVNPPKENDVEGFKNAMTEFN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +L H SYLINL P + EKS A I+E++ +QLG+ NFHPGSHL + EE Sbjct: 61 INFEDVLVHSSYLINLASPKDDIREKSITAMIEEIKATDQLGILHYNFHPGSHLGE-GEE 119 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + +I E ++I + Q VT ++EN A +GSN+G+ E L II+ K R+G+ Sbjct: 120 FGINKILEGLDIIFKEVQNTKVTILLENVAQKGSNIGYSMEQLGRIINKSPWKERLGITY 179 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH F + YD+R E ++ + + +G L+ +HLND+K G+ DRH +G+G Sbjct: 180 DTCHGFDSNYDIRKKEEVQRLLDEIDKYIGLNKLKMIHLNDSKYDVGAAKDRHEFIGKGY 239 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD-IWAEEIAWLKAQQTE 281 IG + F+ + D +PLILET D +++I +K E Sbjct: 240 IGREGFKTFLSFDEISKLPLILETPGDDPEHSQDIKVVKEIFKE 283 >UniRef50_A8ML82 Probable endonuclease 4 n=9 Tax=Bacteria RepID=END4_ALKOO Length = 281 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 6/285 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S++ G A I+A F FT+N R +A + + ++ E+ Sbjct: 1 MLNIGCHLSSSKGYKAMGKDAISINANTFQFFTRNPRGSKAKAMDLKDVEGLLQLMEENK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + A+IL H Y +N E + + +D++ R E L + NFHPG+HL Q E Sbjct: 61 F--AKILAHAPYTLNPCSADERTREFAMEVLVDDLARMEYLPNNFYNFHPGNHLKQ-GVE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + I S+N L Q T ++E +G+G+ +G FE L IIDG++ ++VGVC+DT Sbjct: 118 VGIEYIVNSLNDVLKPDQTTTVLLETMSGKGTEIGKNFEELKQIIDGIKLSNKVGVCLDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH + AGYD+ + + +F R +G L +HLND+K+ F S DRH +GEG IG Sbjct: 178 CHVYDAGYDI--VQDLDGVIQEFDRIIGLDKLYAIHLNDSKNPFASHKDRHAKIGEGYIG 235 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTEKAV 284 + I+ + +P LET N + EEI L+ ++++ Sbjct: 236 EEGIVRIINHPKLRHLPFFLETPNDLEGHGEEIKMLREAYRDESI 280 >UniRef50_B8GKX5 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METPE Length = 286 Score = 280 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 100/284 (35%), Positives = 145/284 (51%), Gaps = 8/284 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS AG +A A RA ID F +F++N R W PL + F+ A Sbjct: 1 MVKIGVHVSIAGSIARAVERAMAIDCDTFQIFSRNPRGWTFKPLAEEDAALFQGALGTSG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 A + H YL NL P E KS +A +E+ RC L + L H G H+ + Sbjct: 61 IGPA--VVHMPYLPNLASPKEEIWRKSVEALTEELHRCSMLDVPYLVTHLGHHMGE-GIG 117 Query: 121 DCLARIAESINIALDKTQG----VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 R+ ++I+ A ++ V ++ENTAG+ +++G +FE + I + D R+GV Sbjct: 118 AGEGRVQQAIDAAFSQSDPGSSRVMLLLENTAGEKNSVGSRFEEIGRIRESCSDPDRIGV 177 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCHAFAAGYDLR +T F +G ++L +HLNDAK+ GS +DRH +G Sbjct: 178 CMDTCHAFAAGYDLRNEVGLSRTLEAFEDGIGIEHLHVIHLNDAKADIGSHLDRHTHIGL 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 G IG + I+ +P I ET D + A ++A + Sbjct: 238 GMIGEEGCSGILTHPTLASLPFICETP-EDAVRDNAANIRAVRR 280 >UniRef50_Q8SQT2 DNA LYASE/ENDONUCLEASE 4 n=3 Tax=Apansporoblastina RepID=Q8SQT2_ENCCU Length = 275 Score = 279 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 115/280 (41%), Positives = 168/280 (60%), Gaps = 7/280 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K IGAH+S + G+ + + A+F K+QR++ P+ + F+A Sbjct: 3 KLIGAHLSISKGIHTIQAQMELLGLDTCAIFLKSQRRYLTPPMKQGAAEMFRAHVRH--- 59 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I+PH SYLIN G+P ++KS + +D+++RC+ LG+ + N HPGS + + Sbjct: 60 -PELIVPHGSYLINFGNPD--LVDKSMECLVDDLERCKSLGIGMYNMHPGSSKGK-GRAE 115 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 CL I +N AL + QGVT +IEN AGQGS +G FE L II G+ED+ R+GVC+DTC Sbjct: 116 CLRSIGHHVNTALSRVQGVTVLIENMAGQGSVVGSSFEELRDIIGGIEDRERIGVCLDTC 175 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H F AG+D+ T + + F R VG ++L+ MH+ND+K GS+ DRH S+G+G IG Sbjct: 176 HLFGAGFDITTEEKFLEVMERFDRVVGLEFLKAMHINDSKEALGSKKDRHESIGKGMIGE 235 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 AFR+IM FD IPLILET +P + EE +L++ + Sbjct: 236 KAFRFIMNSKVFDNIPLILETPDPGKYKEEADFLRSLIGK 275 >UniRef50_B3DVE3 Endonuclease IV n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVE3_METI4 Length = 321 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 6/282 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAHVS AGG ++AA RA A +F KN R+W + + I F + E+ + Sbjct: 43 LLGAHVSIAGGFSSAARRACACGFKAAQIFLKNCRRWEEPKIDEKDIVAFVSLKEENNIF 102 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS-HLMQISEED 121 H SYLINL E +KS +A + E+ E+L L + HPG+ L + Sbjct: 103 F---FGHFSYLINLCSRSKEITQKSLNALVQEIIMAEKLTLPFVVLHPGTIALGKAEISQ 159 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + +N A++ T+ V +E AGQG LG+K E L II+ V+ R C+D Sbjct: 160 AIEVLCGYLNQAVELTKNTAVKIALETMAGQGGQLGWKLEQLREIIERVDSPERFCFCLD 219 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H + AGY+L+T +KT A +G + +HLND+ S FGS+VDRH +GEG + Sbjct: 220 TAHLWEAGYELKTAGGYQKTMEKIALELGLSRIAAIHLNDSFSPFGSKVDRHAHIGEGTL 279 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G + FR ++ D RF GIP++LET ++ L+ ++ Sbjct: 280 GVEPFRRLVNDSRFLGIPMVLETPKEKGLDDDCRNLRKILSD 321 >UniRef50_P50525 DNA-(apurinic or apyrimidinic site) lyase 1 n=1 Tax=Schizosaccharomyces pombe RepID=APN1_SCHPO Length = 342 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 160/257 (62%), Gaps = 4/257 (1%) Query: 23 EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVT 81 I A + A F K+QR+W + L+ +F + + +++ +L H SYLIN+ + Sbjct: 14 YISANSCAFFVKSQRKWTSPDLSEDVAQKFLETASEMKFDASKQVLVHGSYLINMANADE 73 Query: 82 EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVT 141 + E++ + F+D+++RCE+LG+ L NFHPGS ++E+ + +AE IN A ++T+ V Sbjct: 74 QKREQAFNCFVDDLKRCERLGVGLYNFHPGSTA-SCTKEEGINNLAECINRAHEETKSVI 132 Query: 142 AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFA 201 V EN AGQG+ LG F+ AA+ +++ R VC+DTCH FAAGYD+RT +K Sbjct: 133 IVTENMAGQGNCLGGTFDDFAALKSKIKNLDRWRVCLDTCHTFAAGYDIRTEESYKKVID 192 Query: 202 DFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILE 261 +F VG KY+ G HLND+K+ GS D H ++G G +G + FR IM D R+DGIPL+LE Sbjct: 193 EFDEKVGAKYVSGWHLNDSKAPLGSNRDLHENIGLGFLGLEPFRLIMNDSRWDGIPLVLE 252 Query: 262 TI--NPDIWAEEIAWLK 276 T +P+ W +E+ L+ Sbjct: 253 TPAKSPEQWKKEVELLR 269 >UniRef50_B9KBS2 Probable endonuclease 4 n=6 Tax=Thermotogaceae RepID=END4_THENN Length = 287 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 141/282 (50%), Gaps = 2/282 (0%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAH+ + G +I +F +F N R W+A T + +FK +K+ Sbjct: 1 MIKIGAHMPISKGFDRVPKDTIDIGGNSFQIFPHNARSWQAKLPTDEMATKFKREMKKHR 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H YL+NL P + +KS D E++ C +LG+ LN HPGSHL EE Sbjct: 61 IDWENAFCHCGYLVNLASPKEDIWQKSVDLLKTEVEICRKLGIKYLNIHPGSHLG-TGEE 119 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + RIA +N L+ T+ V ++EN + +G N+G++ EHL IID V+ K RV + DT Sbjct: 120 EGINRIARGLNEVLNNTEDVIILLENVSQKGGNIGYRLEHLKRIIDLVDQKDRVAITYDT 179 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F +GYD+ E ++ G + L+ +HLND+K G+ DRH +G G IG Sbjct: 180 CHGFDSGYDITKKEGVESLLSEIENLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIG 239 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 F +P ILET + AE+I + + Sbjct: 240 EAGFAVFFSFKEVQRVPWILETPGGNEEHAEDIKKVSEIIEK 281 >UniRef50_O67551 Probable endonuclease 4 n=2 Tax=Aquificaceae RepID=END4_AQUAE Length = 282 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 150/282 (53%), Gaps = 8/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAHVS+AG + RA +I A F F ++ R W + +T F + + Sbjct: 1 MALFGAHVSSAGSILKTFKRAKDIGAEVFQFFLRSPRAWYWKGVDKETKQAFIEKLKDFK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL+NL P E EKS F++E++ C+++G+ NFHPG+ IS+E Sbjct: 61 ---NPVMVHAPYLLNLASPNEELREKSVKVFLEELKFCDEVGIHFYNFHPGTAKG-ISDE 116 Query: 121 DCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L + +S+ + + T ++ENTAG+ +LG F+ L I++ ++GVC+ Sbjct: 117 EGLRNVIKSLEEVFSEYTPKFTTVLLENTAGERGDLGKNFKELKEIMNVFRGI-KLGVCL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFA GY++ T E + + VG + ++ +H ND+K G R DRH +G+G Sbjct: 176 DTCHAFAYGYEINTKEGFENFKREIEKMVGLESVKAVHANDSKVPLGGRKDRHEHIGKGY 235 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAE-EIAWLKAQQ 279 IG + F+ +++D+ F +P +ET + ++ L+ Sbjct: 236 IGLEGFKNLLKDEYFSTLPYYIETPKENNMDPVNLSVLREIY 277 >UniRef50_C0QRI1 Probable endonuclease 4 n=3 Tax=Hydrogenothermaceae RepID=END4_PERMH Length = 285 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 7/288 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGAHVS++ L R EI A F + R W + + + F + Sbjct: 1 MVKIGAHVSSSKSLDLVFDRGREIGADTIQFFLSSPRSWHWKERSDEEKELFIQKRRETG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + ++ H SYL NL +KS + I E++ CE+L + H G E Sbjct: 61 ISP--VIAHSSYLFNLASSDPVLRKKSINGVIRELKLCEELKIDYYVIHAGKSKGLK-ES 117 Query: 121 DCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + + I +S+ K + + E AGQ +G + LA +++ + K GVC+ Sbjct: 118 EAVKNIIDSVKEIFSKVKLKHTFFLYETLAGQKGEIGKTTDELAQLMEPFK-KENTGVCV 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH ++AGY + ++ ++ +G + ++ +H ND+K+ F S+ DRH +GEG+ Sbjct: 177 DTCHIYSAGYKINDEEGFYSYRSELSKKIGLENVKVIHCNDSKTPFNSKRDRHEHIGEGS 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTEKAVA 285 IG+ F + + D+ F +P ILET D + + L+ VA Sbjct: 237 IGYKGFEFFLNDEYFRRLPFILETPKTADWDIKNMERLRRLIRTAPVA 284 >UniRef50_D1CCS6 Apurinic endonuclease Apn1 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCS6_THET1 Length = 296 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 92/285 (32%), Positives = 139/285 (48%), Gaps = 6/285 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAHV GGL+ A RA EI A +F +QWR + + F A + ++ Sbjct: 11 PLIGAHVGIGGGLSKAIPRALEIGANCIQIFVSAPQQWREPAHPDEEVQLFIDAYNQSNF 70 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I H YL+N P TE EKS + I + ++LG + H GS + E+ Sbjct: 71 R--AIFLHAIYLLNPAAPNTELREKSISSIISYLHWGKRLGAQGVVIHLGSSSG-TTREE 127 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + S+ ALD T V ++E +AG ++LG F+ LA I+ + D R +C+DT Sbjct: 128 AEKNLVNSVKTALDNTDEVPVLLETSAGTKNSLGSTFDDLARILYKIGDTKRAAICLDTA 187 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H +AAGYDL + +TF +F + +G L+ +H ND G DRH ++GEG IG Sbjct: 188 HIWAAGYDLSSEDAVNQTFEEFDQKIGLDKLKLIHANDTNVRIGGGRDRHENIGEGIIGE 247 Query: 242 DAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWLKAQQTEKA 283 ++ ++ + P ILET + + AE+I L+ K Sbjct: 248 RGWKALLTNPGIRFKPWILETPQIADKNSGAEQIKKLRQWWEGKD 292 >UniRef50_B0B8K0 Probable endonuclease 4 n=15 Tax=Chlamydiales RepID=END4_CHLT2 Length = 288 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 118/280 (42%), Positives = 162/280 (57%), Gaps = 7/280 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAH SAAGGL NA +I AT LFT NQRQW+ LT + +D+F+ A + Sbjct: 10 PLLGAHTSAAGGLHNALYEGRDIGATTVQLFTANQRQWKRRALTQEMVDQFRIALNETSL 69 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + I+ H YL N G P E LEK+R E+ C LG+S +NFHPG+ L S+E Sbjct: 70 SY--IMSHAGYLNNPGAPNPEILEKTRVCMHQEIADCISLGISFVNFHPGAAL-SDSKES 126 Query: 122 CLARIAESINI---ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 CL R S + + + ++E TAGQGS +G FE LA +I G++ +GVC+ Sbjct: 127 CLDRAITSFSQMAPLFENHPPLVVLLETTAGQGSLIGSSFEELAYLIQGIKALIPIGVCL 186 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+ + A E+ F +G +LR +HLND+ G DRH +GEG Sbjct: 187 DTCHIFAAGYDISSVAGWEQVLKHFDAVIGLSFLRAIHLNDSVFALGKNKDRHAPIGEGC 246 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKA 277 IG D+F ++MQD+R +P LET PD+W +EI +L+ Sbjct: 247 IGSDSFCFLMQDERTRMLPKYLETPGGPDLWTKEIRYLQK 286 >UniRef50_Q72CQ9 Probable endonuclease 4 n=3 Tax=Desulfovibrio vulgaris RepID=END4_DESVH Length = 282 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 101/282 (35%), Positives = 140/282 (49%), Gaps = 6/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M GAH+SAAGG++NA EI LFT NQRQW + ++ F + Sbjct: 1 MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVEAFGRRRAAFG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYLIN+ + A K+ +A + E +RC LG+ + HPG+HL Sbjct: 61 ---GPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGVDAVVLHPGAHLG-AGRG 116 Query: 121 DCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + R A +I+ D+ G ++ENTAGQG+ LG LA IID S++GVC+ Sbjct: 117 TGILRAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIIDASRHASQLGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HAF AGY L T + D G +R H+ND+ GSR DRH +GEG Sbjct: 177 DTAHAFGAGYALHTDEGYRRCMEDIEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQ 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 +G AF ++ D F P++LET D A + L + Sbjct: 237 LGEAAFVRLLNDPVFAMHPMVLETPKEDGHAADRRNLATLRR 278 >UniRef50_B3V621 Endonuclease IV n=2 Tax=environmental samples RepID=B3V621_9EURY Length = 287 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 130/291 (44%), Positives = 182/291 (62%), Gaps = 15/291 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAHVS AGGL NA + A EI+A F +F+KNQRQW A PLT + ++ FK + Sbjct: 1 MRLGAHVSVAGGLQNAILWALEIEADTFQMFSKNQRQWIAKPLTDKEVEAFKTPLAETDL 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL------- 114 ++ HDSYLIN+G P ++++ AF++E RCE LG++ LNFHPGSH Sbjct: 61 GP--LMIHDSYLINMGSPDETKGKRAQVAFLEEYHRCEALGVAYLNFHPGSHTHPKKDMR 118 Query: 115 -MQISEEDCLARIAESINIALDKTQGV--TAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 + + + L RIA +N L++T+G VIEN AGQG+N+G KFE + IID + DK Sbjct: 119 DDKQTRNEALERIANHMNKTLEETKGYGSKLVIENAAGQGTNVGIKFEEIKHIIDHINDK 178 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRH 231 RVGVCIDT HA+A+GYD R + ++ + DF VG +YL +HLND+KS GSRVDRH Sbjct: 179 KRVGVCIDTQHAWASGYDWRN--DFDQIWDDFEEIVGMEYLVALHLNDSKSDLGSRVDRH 236 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTE 281 ++G G +G + F+ MQ+ R + + LET P++W EIA L+ + Sbjct: 237 DNIGVGKLGKNTFKSFMQEKRLEHLAGYLETPGGPEMWKPEIAVLRKLAEK 287 >UniRef50_C1SMN6 Apurinic endonuclease APN1 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMN6_9BACT Length = 273 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 7/279 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAH S + + + RA +F KN +W ++ + ++F+ + Sbjct: 1 MLIGAHQSISKSIDLSIKRALADGCECLQVFVKNNNRWEGKVISEEEAEKFRKGLADSGF 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H SYLINL + KS A DE+ RC++L + HPGSH+ + E+ Sbjct: 61 ---KVCAHSSYLINLASFKEDTYIKSVKACNDELSRCDRLNIPFYVIHPGSHVGE-GEKK 116 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 + RIA++I+ + ++E AGQG+N+G+ E++ II+ K ++G+C D+C Sbjct: 117 GIRRIADTIDRVYEGGYQCMTLLEMVAGQGTNIGYSIENMLDIIELSASKDKIGICFDSC 176 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAG+DL+ + + + G ++ HLND+K SR DRH +G+G IG Sbjct: 177 HMFAAGFDLK--DDYDNVTKELFEAFG-DKVKVFHLNDSKKPLNSRRDRHELVGKGEIGE 233 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 D F+ + D RF I ILET + + +EI LK+ + Sbjct: 234 DFFKKAVNDARFSDILGILETPVEENYKKEIELLKSYRE 272 >UniRef50_Q1PX39 Similar to endonuclease IV n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX39_9BACT Length = 278 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 103/280 (36%), Positives = 147/280 (52%), Gaps = 9/280 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G H S G L NA AA + F +FTKNQRQW+ + F+ + + Sbjct: 1 MLLGVHCSIKGSLHNAFNEAASLGIDTFQIFTKNQRQWKEKIVGPAEKTIFRETLRQSNI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I H SYLINL + + ++ + E+QRC+ LG++ + HPG ++ Sbjct: 61 K--TIFSHASYLINLATSDSRIYALTHNSLLGEIQRCDDLGIASIIIHPGFT-KNTGKQT 117 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + + I L KT V ++ENTAGQGS++G+ F+ L +I+G+ R+GVC D Sbjct: 118 GMKNVIKMIKSVLKKTNNSPVKILMENTAGQGSSIGYHFKQLQQLIEGIGS-GRIGVCFD 176 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCHAFAAGYD+RT E T + TVG L +HLND+K GS++DRH +G+G I Sbjct: 177 TCHAFAAGYDIRTKIGFETTMEELDATVGLNSLYAIHLNDSKGALGSKIDRHEHIGQGAI 236 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWA-EEIAWLKAQ 278 G + FR IM IP ILET + + LK Sbjct: 237 GLEPFRQIMN--TMKHIPKILETPKEGGMDVKNLNILKGL 274 >UniRef50_Q1IS22 Endonuclease IV n=2 Tax=Acidobacteria RepID=Q1IS22_ACIBL Length = 328 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 100/282 (35%), Positives = 141/282 (50%), Gaps = 9/282 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG H S+AGG+ AA RA + + +F+ + RQW+ L + + KY Sbjct: 29 VRIGIHTSSAGGVELAAERAYRLGCSCLQIFSSSPRQWKPFELGRSQCETMSSIRAKYDL 88 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H +YLIN+ E +KS +AF E+QR L L HPGS + ED Sbjct: 89 NP--LVIHANYLINVAGGNPEFHQKSIEAFRAEVQRGIDLCADYLVLHPGSFKG-ATRED 145 Query: 122 CLARIAESINIALD----KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 L R AE+I A+D + + IENTAG +LG FE +A ++ + V C Sbjct: 146 GLQRAAEAIEAAVDGLGIEKTNLKITIENTAGSEFSLGGSFEQVAELMARLRKHVPVAAC 205 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDTCH AGYD+ T EKT TVG K + H NDAK+ GS++DRH +G+G Sbjct: 206 IDTCHTHVAGYDITTKKGFEKTLQQLDDTVGLKNVGVFHCNDAKAPRGSKLDRHQHIGQG 265 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKA 277 IG + F+W++ D R I ET + + I LK+ Sbjct: 266 TIGLEPFKWLLNDPRLQHPAFIAETPIDEPLDDLKNIDALKS 307 >UniRef50_Q30YP7 Probable endonuclease 4 n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=END4_DESDG Length = 294 Score = 266 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 107/280 (38%), Positives = 146/280 (52%), Gaps = 6/280 (2%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IGAH+SAAGG+ A RA ATA +FT+NQRQW A PL + F AA ++ Sbjct: 14 LIGAHMSAAGGVHKAVERAEAAGATALQVFTRNQRQWNAPPLEEHDAELFTAAVRRWG-- 71 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H SYLIN E E+S DE+QR +LG+ ++ HPG+H Q Sbjct: 72 GYPVSSHASYLINPAADTPEGAERSVALMADELQRAGRLGIEMVVVHPGAHKGQGEAAGA 131 Query: 123 LARIAESINIALD-KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 A + V ++ENTAGQG+ LG F LAA+I+ R G+C+DT Sbjct: 132 ALAAARLDEALERCGSPAVMVLLENTAGQGTMLGASFAGLAAVIEASRMPERYGICLDTA 191 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HAF AGYDLR A + + G LR +H ND+ + GSR DRH +G+G +G Sbjct: 192 HAFGAGYDLRDAALYDAAIRELDVCAGLDRLRLVHANDSLTGLGSRRDRHTHIGQGELGE 251 Query: 242 DAFRWIMQDDRFDGIPLILETIN---PDIWAEEIAWLKAQ 278 AFR +M+D+R +P +LET P+ +A L+ Sbjct: 252 AAFRLLMRDERLHHVPKVLETPKGKGPEEDMMNMAVLRRL 291 >UniRef50_Q7NBA9 Probable endonuclease 4 n=1 Tax=Mycoplasma gallisepticum RepID=END4_MYCGA Length = 303 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 15/291 (5%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 +KY+G V A + + AT+F ++ + +R P +D KA K Sbjct: 6 IKYLGCFVGATKPDFMLGMVKTVVDYGATSFMFYSGPPQSFRRTPTAQFKLDLAKAYLAK 65 Query: 59 YHYT--SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 ++ + H YLINL + + E+S + F+DE++R +LG HPGS L Sbjct: 66 HNLGDLGDNYVVHAPYLINLANGDSTKRERSFNFFLDELKRTNELGAKYFVLHPGSALNV 125 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + L +A +N A+ T+ +E A +G + KFE L +ID + DKSR+GV Sbjct: 126 KDKTQALDHLATELNRAISMTKDTIICLETMADKGQQICSKFEELRYVIDQISDKSRIGV 185 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C DTCH AGYDL ++ F + +G KYL +HLND+K+ G+R DRH ++G Sbjct: 186 CFDTCHVHDAGYDLAKT---QELIDHFDQVIGLKYLYVIHLNDSKNPMGARKDRHANIGY 242 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDI--------WAEEIAWLKAQQ 279 G IG + + +ILET D + EEI ++ ++ Sbjct: 243 GKIGFENLLNFIYHKEICNKIIILETPWIDDPIRGEVPLYKEEIEMIRNKK 293 >UniRef50_Q49Y00 Probable endonuclease 4 n=15 Tax=Bacteria RepID=END4_STAS1 Length = 296 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 16/294 (5%) Query: 2 KYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 +G+HVS G L +A A + + F ++T + R P+ I++ + + Sbjct: 1 MLLGSHVSMNGKKMLEGSAEEAHKFGESTFMIYTGAPQNTRRKPIEELNIEKGHEIMKAH 60 Query: 60 HYTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + I+ H Y+IN+ + E + E++R + LG + HPGSH+ + + Sbjct: 61 GL--SNIVVHAPYIINIANTVKPHVFELGVEFLQSEIERTQALGAQDIVLHPGSHVGEGT 118 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + + +I E +N L V +E AG+GS +G FE LA IIDGV R+ VC Sbjct: 119 -DAGIKKIIEGLNEVLTNDNNVRIALETMAGKGSEVGRNFEELARIIDGVNHNDRLSVCF 177 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH AGY+++ + + +F + +G ++ +H+ND+K+ G+ DRH ++G G Sbjct: 178 DTCHTHDAGYNVK--EDFDGVLNEFDKIIGVDRIKVVHVNDSKNDIGAHKDRHENIGFGY 235 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI--------NPDIWAEEIAWLKAQQTEKAV 284 IG DA +++ D F IP ILET + EI LK Q+ ++ + Sbjct: 236 IGFDALNYVVHHDTFKDIPKILETPYVGEDKKNKKPPYKLEIEMLKQQKFDEDL 289 >UniRef50_Q4PHV5 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=Q4PHV5_USTMA Length = 552 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 158/305 (51%), Gaps = 43/305 (14%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +IGAH+S+AGG+ NA + A I AF+ F + + QW + P+ + ++FK ++ + Sbjct: 157 LFIGAHISSAGGVENAPLNALRIGGNAFSCFVRPKMQWASNPIRDTSAEQFKQHVMQHSF 216 Query: 62 TSAQILP------------------------HDSYLINLGHPVTEALEKSRDAFIDEMQR 97 A + H YL+NL +P EKS AFID++QR Sbjct: 217 MPAALSVKKEQDIEQETHRLSDVEEYGYVVPHGCYLVNLANPDESKREKSFQAFIDDLQR 276 Query: 98 CEQLGLSLLNFHPGS----------HLMQISEED-------CLARIAESINIALDKTQGV 140 CEQLG+ L NFHPGS + A +A IN A T V Sbjct: 277 CEQLGIRLFNFHPGSMTVASIYGEEPPDVGPRSEVRAAKADACALVASYINRAHSLTSSV 336 Query: 141 TAVIENTAGQGSN--LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEK 198 +IEN AG ++ LG LA+II GV+DKSRVGVCIDTCHAFAAGYDL TPA Sbjct: 337 IILIENMAGSKNDTILGSSLADLASIISGVQDKSRVGVCIDTCHAFAAGYDLTTPAAYAT 396 Query: 199 TFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPL 258 +G++ +R HLND+K + DRH ++ G+IG F I+ D R++GIPL Sbjct: 397 FTELIDSKIGWQTVRAFHLNDSKFPLACKRDRHANIARGHIGLGGFWNIVNDQRWNGIPL 456 Query: 259 ILETI 263 ILET Sbjct: 457 ILETP 461 >UniRef50_Q47NI0 Endonuclease IV n=1 Tax=Thermobifida fusca YX RepID=Q47NI0_THEFY Length = 293 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 92/285 (32%), Positives = 129/285 (45%), Gaps = 11/285 (3%) Query: 3 YIGAHVSAAGGLAN-AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAHV +GGLA A I A +F N R W P + +A Sbjct: 8 RIGAHVPVSGGLAKRGLSYADAIGAEVIQVFVTNPRSWAHTPGNAEQDALLRAR------ 61 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 T + H YLINLG P E +S + +QR Q+G + H GS + Sbjct: 62 TDLPVFVHACYLINLGSPDEEIAARSVASLKYTLQRAAQIGARGVVVHTGSAVR-GGRAA 120 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LAR+ + L+ ++E AGQG L + LA +D V+ + GVC+D Sbjct: 121 GLARVRARLLPILEALDEAAPPVLLEPMAGQGQVLCATVDDLADYLDAVDRHPKAGVCLD 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T H F AG+D+ T A F VG LR +H ND+ + GSR DRH +G G I Sbjct: 181 TAHVFGAGHDVSTRAGMRTMLDRFGEVVGADRLRLVHANDSAAPCGSRRDRHAGIGLGYI 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPD-IWAEEIAWLKAQQTEKA 283 G D F + G+P+++ET P+ A ++A LK + + A Sbjct: 241 GADPFAEVFTHPVSAGVPVVVETPGPEGPHARDVATLKELRAQAA 285 >UniRef50_C8WVD3 Apurinic endonuclease Apn1 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVD3_ALIAD Length = 282 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 7/275 (2%) Query: 2 KYIGAHVSAAG-GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 +GA+VS AG GL A A F ++T++ R +A P+ T DE A ++ Sbjct: 10 ILLGANVSVAGTGLLAAVEETISYGANTFMIYTRSNRGGKARPIETFHRDEGLALMREHG 69 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H SYL+NL P E + D +E++R E LG + HPGSH+ + E Sbjct: 70 IHDP--VVHLSYLVNLASPKPETRQYGMDVLREEIERVEYLGFRYIVMHPGSHVGE-GES 126 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + +IA+++N L + + +E AG GS +G E +A II V+ + R+ VCIDT Sbjct: 127 FAIRQIADALNEILTGDESLWLCLETMAGDGSKVGNSLEEIADIISRVKHEDRLAVCIDT 186 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH ++ GYD+ + + A+F R +G L+ +H+ND+K FGSR DRH ++GEG +G Sbjct: 187 CHNYSYGYDVVN--DFDGFLAEFDRVLGLDRLKVVHINDSKHPFGSRKDRHANVGEGTLG 244 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 +A + I+ GIP ILET + EEI L Sbjct: 245 LEALKRIVHHPALKGIPQILETP-EGKYKEEIDLL 278 >UniRef50_D1B9W5 Apurinic endonuclease Apn1 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9W5_THEAS Length = 277 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 98/279 (35%), Positives = 141/279 (50%), Gaps = 7/279 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS GG+ A R + A +FTKNQ QW ++P+ + F A Sbjct: 1 MALLGCHVSIEGGVWRAIERGDSLGCRAIQIFTKNQLQWMSSPIPLDVAERFYRAWRASG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +++ H SYLINL ++S +A E QRC LG+ LL FHPG H + Sbjct: 61 I--VEVVSHASYLINLASHDPVLWKRSVEALTYEAQRCLDLGIGLLVFHPGHH-GGAGYQ 117 Query: 121 DCLARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + + I L+ GV ++E +AGQG+++GF + + + R+G+C+D Sbjct: 118 VGMEWLERGIQQVLEAIPLGVRLLLEPSAGQGTSVGFVLKDCVELCHRIGY-ERLGLCLD 176 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAGYD RTP ++ G + + HLND+K GSR DRH +G G I Sbjct: 177 TCHLFAAGYDFRTPGGYDRLLRSLGDR-GTRLVGCWHLNDSKDPKGSRKDRHQRVGIGTI 235 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 G F+ I+ D RF +P I+E P AE++A L Sbjct: 236 GLAPFQMILSDPRFHAVPAIVEAP-PSTVAEDLALLNKL 273 >UniRef50_A7H9B2 Apurinic endonuclease Apn1 n=2 Tax=Cystobacterineae RepID=A7H9B2_ANADF Length = 280 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 116/280 (41%), Positives = 154/280 (55%), Gaps = 11/280 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAH AGG++ A RA A +FT+N R W A PL + I FK ++ Sbjct: 5 MLLGAHEGIAGGVSTAFTRAEADGADCLQIFTRNARGWAAKPLEAEEIARFKGEAKRTKL 64 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +A H SYLIN + KS DE+ RCE LG+ L FHPGSH E + Sbjct: 65 PTA---AHSSYLINCCSEDADIRRKSWAGLADELGRCEALGIPSLIFHPGSHC---DEAE 118 Query: 122 CLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR--VGVCI 178 + +AE++ ALD G ++E TAGQGS+LG++FEH+AAI D V R VGVC+ Sbjct: 119 GIRLVAEAMERALDAVPGKARLLVETTAGQGSSLGWRFEHVAAIRDAVPAAKRRRVGVCV 178 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FAAGYD+ A +T + R VG +R HLND+K G RVDRH +GEG Sbjct: 179 DTCHVFAAGYDITHEAGYHRTIEELDRVVGLANVRAFHLNDSKKPLGCRVDRHEHIGEGA 238 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 +G FR+++ D RF +P +ET + W E I L+ Sbjct: 239 MGITPFRFLVNDARFAELPGFVETESR--WKENIEVLRGL 276 >UniRef50_B2V7A4 Probable endonuclease 4 n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=END4_SULSY Length = 279 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 7/281 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG HVS++ L R E++A++ F ++ R W T + + F +Y Sbjct: 1 MVNIGTHVSSSKSLDLVFERGKEVEASSIQFFIRSPRSWAWIERTDEEKERFLQKKNEYK 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H SYL NL E +KS ++ I E++ CE+L + H G ++ Sbjct: 61 IHP--LVVHASYLFNLASFEEELYKKSIESVIQELKLCEELKIDYYVIHAGKSKGNP-KK 117 Query: 121 DCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + RI + + + T ++E AGQ +G E + +I+ E+ ++GVC+ Sbjct: 118 QAIDRILRAFEEIFSRLNLKNTTFLVETLAGQSGEVGATLEEVYTLIEPFEN-EKIGVCL 176 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH FA+GY + T + + + +H ND+K+ F S+ DRH +G+G Sbjct: 177 DTCHIFASGYQINTDEGFNSFKKELIDYNLLEKTKVIHCNDSKAPFNSKKDRHEHIGKGF 236 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQ 278 IG + FR + DD F+ +P ILET D+ I LK+ Sbjct: 237 IGLEGFRIFLNDDDFNKLPFILETPKEGDMDRVNINLLKSL 277 >UniRef50_B3T9U7 Putative AP endonuclease family 2 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U7_9ZZZZ Length = 285 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 8/288 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAHVSAAGG+ A R EI A A +F + +QW PL + FK ++ Sbjct: 1 MRLGAHVSAAGGIDLAIDRGVEIGAEAVQIFASSNQQWAFKPLDEKQTASFKTKALEHSI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H YL+ LG E L + + ++ M LG+ + FH GSH E Sbjct: 61 GPN--VLHGIYLVTLGTEEPELLRRGVQSLVNYMNAAHDLGMLGVVFHLGSHKG-AGFEA 117 Query: 122 CLARIAESINIALDKTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 ++ ES+N LD + T +I EN+AG G+++G KF L ++ V RV VC+DT Sbjct: 118 VFRQVVESMNRVLDNSPDDTLLIMENSAGMGNHIGSKFHELGTLLKEVGSP-RVKVCLDT 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H+FAAGYDL TP T F +G ++L +H ND+K G+ VDRH ++GEG +G Sbjct: 177 QHSFAAGYDLTTPEAVAGTLRQFDGEIGLEHLAAIHCNDSKRDLGAGVDRHENIGEGYMG 236 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIW---AEEIAWLKAQQTEKAVA 285 +AF I+ +P LE + + +K+ + ++A++ Sbjct: 237 LEAFEAILAAPALRDVPFYLEVPGFEGHGPDRRNMDIIKSIREKQAIS 284 >UniRef50_A3ERM7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum rubarum RepID=A3ERM7_9BACT Length = 317 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 8/286 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++G HVS GGLA + R + + +F+ + R W LT ++ F + +K Sbjct: 15 LFLGTHVSIRGGLALSIERGETLGCGSIQIFSHSSRTWAVPALTEAEVNAFVSRHQKSSV 74 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 75 GP--VLMHASYLVNTATSDPEKRKKSAAALEEDWILANRLGVYGLVLHPGSAAGQ-SDAA 131 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + AE I +D+ +G ++ENTAG G LG + ++D V+ +VG+C+D Sbjct: 132 AIRLSAEMIRDTVDREKGGSTLLLLENTAGGGRTLGRDPGTMKQLVDRVDRPEKVGLCLD 191 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 +CH A+G ++R P E+ + + G +R HLNDA GS DRH +G+G+I Sbjct: 192 SCHLLASGAEIRNPRSYEEVLSAWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSI 251 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEE---IAWLKAQQTEK 282 G F +++D RF GIP++LET D E+ + L+ ++ Sbjct: 252 GLWFFWTLLRDHRFTGIPMVLETPKTDDIREDRLNLGILERLSRQE 297 >UniRef50_B2A499 Probable endonuclease 4 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=END4_NATTJ Length = 284 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 4/279 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G H+ +GG+ RA+E+ +F+ N W+ +T ++ D F E+ Sbjct: 1 MRLGFHMPLSGGVGKQLNRASELGMECIQIFSGNPTSWKPGKITPKSRDLFIKKQEELQI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H YLINL P + EKS +++ + + H GSH+ + E Sbjct: 61 KP--LVFHTPYLINLASPKNDIREKSIYLLNAALEKAKAYDAPYVVTHIGSHVGE-GVEK 117 Query: 122 CLARIAESINIALDK-TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + ++ S+ ++ +GV ++ENT+G GS LG L IID +G C DT Sbjct: 118 GIDLVSYSLEKIMEDWPEGVELLLENTSGAGSTLGGSLTELKKIIDKFSGTQVLGCCFDT 177 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 HA+ AGYD+ E E T +G ++ H ND GS DRH +GEGNI Sbjct: 178 AHAWGAGYDISNVKEVETTLELVNEQLGLDLIKVCHANDTNVPLGSTKDRHQHIGEGNIT 237 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + F ++ D F +I+ET ++I + ++ Sbjct: 238 DEGFGALLTHDSFTPKAVIMETPKNGTDCDQINLQRLKK 276 >UniRef50_B5ZBB4 Probable endonuclease 4 n=15 Tax=Ureaplasma RepID=END4_UREU1 Length = 304 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 5/274 (1%) Query: 4 IGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS A + A A ++T + R P+ I+E ++++ Sbjct: 8 IGSHVSLKANDFFYGSVKEALSYGANTLMVYTGAPQNTRRQPIELFKINEAHNLLKEHNI 67 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H Y+IN E +++ I E++R + +G++ + HPGS L Q E+ Sbjct: 68 DLNNLIVHAPYIINPCSSKKYVRELAKEFLIQEIERTQFMGITKIVLHPGSCLDQ-DEDI 126 Query: 122 CLARIAESINIALD-KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L ++ +N V +E +G+GS +G + L IID V+ K +GVC+DT Sbjct: 127 ALKQVYTMLNEIFATINTNVVVCLETMSGKGSEIGINLKQLKTIIDNVDSKKNIGVCLDT 186 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH +G L + +F +G Y++ +H+ND+K+ G+ DRH +LG G IG Sbjct: 187 CHMSDSGIAL-DHDSFNQYLKEFDAQIGIDYIKVLHINDSKNPRGANKDRHENLGYGTIG 245 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAW 274 D I+ + IP ILET D + I+ Sbjct: 246 FDNLINIIYHPLLNNIPKILETPWFDFHDQSISL 279 >UniRef50_Q2ST57 Probable endonuclease 4 n=4 Tax=Mollicutes RepID=END4_MYCCT Length = 289 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 11/281 (3%) Query: 2 KYIGAHVSAAG---GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 +G HVS L + A A F +FT + I++ Sbjct: 4 VLLGCHVSMNKQNNYLVGSVNEAISYKANTFMIFTGPPQSTLRTNTNHLYINQMHELMNS 63 Query: 59 YHYTSAQILPHDSYLINLG-HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 Y + ++ H Y+IN+ E + + I E++RCE++ + L HPGS+ Sbjct: 64 YKIDAKDLVVHAPYIINIANSVDQNKWEFAVNFLIQEIKRCEEIKIPTLVLHPGSYTTGN 123 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ++ L +I +++++ + V +E +G+G+ + K E I+D V++K +VGVC Sbjct: 124 YKD-SLNQIIKALDMVSNYQVNVKIALETMSGKGTEVCSKLEDFKYILDNVKNKDKVGVC 182 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH AGYDL E ++ + +HLND+K+ S DRH ++G G Sbjct: 183 LDTCHLHDAGYDLSKWTEFKEQIKQ---NFNLDKVLCIHLNDSKNMISSHKDRHANIGYG 239 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWL 275 +G D ++ D F I ILET D + EI L Sbjct: 240 FVGFDTLVNVVFDKDFSNISKILETPYIDKKAPYKIEIEDL 280 >UniRef50_B6AQQ7 Apurinic endonuclease (APN1) n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQQ7_9BACT Length = 318 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 8/286 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++G HVS GGL + R + + +F+ + R W + + F + +K Sbjct: 16 LFLGTHVSIRGGLVLSLERGETLGCGSIQIFSHSSRTWDLPSIPDGEVHAFVSRHKKSSV 75 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +L H SYL+N E +KS A ++ +LG+ L HPGS Q S+ Sbjct: 76 GP--VLMHASYLVNTATSDPEKRKKSARALKEDWVLANRLGVYGLVLHPGSAAGQ-SDAA 132 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + A+ I +D +G ++ENTAG G LG + +++ ++ +VG+C+D Sbjct: 133 AIRLSAKMIRDTVDMEKGGSTRLLLENTAGGGRTLGRDPGTMKQLVERIDRPEKVGLCLD 192 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 +CH A+G +LR P CE+ + G +R HLNDA GS DRH +G+G+I Sbjct: 193 SCHLLASGAELRNPRSCEEVLLSWTEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGSI 252 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEE---IAWLKAQQTEK 282 G F +++D R+ GIP +LET D E+ + L+ ++ Sbjct: 253 GLWFFWNLLRDRRYTGIPKVLETPKTDDVREDRLNLGILEKLSRQE 298 >UniRef50_Q01TU5 Probable endonuclease 4 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=END4_SOLUE Length = 290 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 139/287 (48%), Gaps = 9/287 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G H +G L AA+ A ++ A F +F+ + R WRA I AA E++ Sbjct: 1 MRLGIHTFTSGSLETAALTAGDLGAATFQIFSASPRMWRARVPDPVQIKLLCAARERFSL 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + ++ H +YL+NL KS DAF E+QR +G L HPGS+ + E+ Sbjct: 61 SP--LVIHTNYLVNLASLDPVIRAKSIDAFRGELQRAIAIGAEYLVVHPGSYRG-HTVEE 117 Query: 122 CLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS--RVGVC 177 +A A + A +T ++ENTAG G +LG KFE L +I D + + +G C Sbjct: 118 GIAAFALGLRDASAGLPPHQLTVLLENTAGAGCHLGGKFEELRSIRDLTAELTDLPIGYC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH AAG+D+ T T +G + H ND++ GS VDRH +GEG Sbjct: 178 LDTCHLLAAGFDIVTAPGLRATLRAAEAVLGLANVHVFHANDSRFPRGSHVDRHAHIGEG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQQTEK 282 IG DAFR I+ + P ILET + + LK+ K Sbjct: 238 FIGADAFRRILTHPKLRRKPFILETPVDEPGDDRRNLDILKSLAGSK 284 >UniRef50_Q67S99 Probable endonuclease 4 n=1 Tax=Symbiobacterium thermophilum RepID=END4_SYMTH Length = 276 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 133/281 (47%), Gaps = 9/281 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G H+S + G A A + AF FTKN R ++ + +A +Y Sbjct: 1 MKLGCHISISKGFPQAVENAHRLGCEAFQFFTKNPRGFKGKSADPEAAARGRALMAEYGL 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + + H Y+ NL P E S + +++ E G H G H+ + E Sbjct: 61 VA---VAHAPYITNLSTPDPELQAISIASLKQDLENAEAYGAIGCVCHMGKHVGE-GEAY 116 Query: 122 CLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 AR+ E++N L+ G ++ENTAG GS LG E L + VE R+ C DT Sbjct: 117 GRARMVETLNRLLEAYTGSCPLLLENTAGMGSELGTHLEELMEVRSRVEQPERIAFCFDT 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFAAG + P + E A + LR +HLND+K GSR DRH +LG+G +G Sbjct: 177 CHAFAAG--IYRPEDWEDFVAHARAIGYWGLLRAVHLNDSKFDHGSRKDRHANLGKGFLG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQQ 279 +++ F+G+P++LET D + EIA+ ++ Sbjct: 235 EAGIATLLRSGAFEGLPVVLETPVKDEAEYGPEIAYARSLL 275 >UniRef50_Q18KA6 Probable endonuclease 4 n=7 Tax=Halobacteriaceae RepID=END4_HALWD Length = 278 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 92/281 (32%), Positives = 138/281 (49%), Gaps = 8/281 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAH S AGG+ANA R E +FT + + W+ + + F+ + + Sbjct: 1 MLVGAHESIAGGVANAVDRQLENGGNCGQIFTHSPQVWQDPSIDDTDAEAFRDRSQMHDI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H SYL+NL P + KS D+ E+ QL + +N H G+H ++ Sbjct: 61 GPW--VIHSSYLVNLCTPKDDLRAKSIDSMQQEVDAAAQLSIPYVNVHLGAHTG-AGKQQ 117 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L +++ L VT ++E+ AG G+ LG KF+HLA +++ + + VC+DT Sbjct: 118 GLDNAISALDE-LTIPDSVTVLLESDAGSGTKLGNKFDHLAYVLEESTHE--LEVCLDTA 174 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FAAGYDL TPA T +F TVG L +HLND+K G+ D H +GEG IG Sbjct: 175 HVFAAGYDLSTPAAVNTTIKEFDTTVGVDNLACVHLNDSKHACGTNKDEHAHIGEGKIGE 234 Query: 242 DAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQQT 280 + D IPL+LET N + +A I ++ Sbjct: 235 SGMEAFINHSAIDPIPLVLETPNENGKGFAWNIDRVQNLAE 275 >UniRef50_UPI0000E490E9 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490E9 Length = 479 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 120/219 (54%), Positives = 152/219 (69%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S +GGL NA A I A +FALF ++QRQW+A PL F+ AC K+ Y IL Sbjct: 260 MSKSGGLWNAVSDAVSIGAKSFALFLRSQRQWQAKPLEDDNAARFQEACIKHGYPPHLIL 319 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 PH SYL+N G P L KSRD+ +DE+ RC++LGL+L NFHPGS I+ E+CL +I Sbjct: 320 PHGSYLLNCGSPNPATLSKSRDSLVDELSRCQKLGLTLYNFHPGSTCGDITIEECLDKIG 379 Query: 128 ESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 ESIN+AL KT GVTAVIEN + QG +G FE L IID V+DKSR+GVC+DTCHAFAAG Sbjct: 380 ESINMALAKTSGVTAVIENMSRQGHTIGGDFEELRGIIDRVKDKSRIGVCLDTCHAFAAG 439 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS 226 YDL T + +K A+F R +GF+YL+G+HLND+K S Sbjct: 440 YDLSTESGYKKMMAEFERVIGFQYLKGVHLNDSKVPQKS 478 >UniRef50_UPI0001C3188E apurinic endonuclease Apn1 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3188E Length = 289 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 97/276 (35%), Positives = 138/276 (50%), Gaps = 7/276 (2%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IGAHVS AGGL NA R E TA +F ++ R WR + F+ A Sbjct: 1 MLIGAHVSQAGGLPNAIERGVEKGCTAIQIFNQSPRMWRPTQYSEDDFAAFRDAM--AGS 58 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H YLIN E KS + ++ + +G S + HPGS L + Sbjct: 59 PIRAVMIHAVYLINCASEDPEIRTKSLASLTQSLRVGDAIGAS-VVLHPGSALRGH-VGE 116 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 +AR AL +++ ++E+TAG G LG FE L +ID R+GVC+D+C Sbjct: 117 AIARAGGVFREALAESESSALLLEDTAGAGGTLGRSFEELRELIDAAGGGERLGVCLDSC 176 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H A+GYD+RT +T F VG L G+HLND+ + G+ DRH +LGEG +G Sbjct: 177 HLLASGYDVRTIDGLSETLDRFDAAVGLGRLGGLHLNDSVNALGTNRDRHANLGEGELGE 236 Query: 242 DAFRWIMQDDRFDGIPLILETINPD---IWAEEIAW 274 + + RF+ +P++LET PD AEEI + Sbjct: 237 TGCMAFLSEPRFENLPVVLETPGPDKRGTSAEEIVY 272 >UniRef50_Q82AG6 Probable endonuclease 4 n=28 Tax=Actinomycetales RepID=END4_STRAW Length = 310 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 8/282 (2%) Query: 4 IGAHVSAAGGLAN-AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G HV AGGL + A ++ A A +F N R W + +EF+AAC Sbjct: 31 VGGHVPVAGGLHSVGLAYARDLAAEAVQVFVANPRGWATPAGNPRQDEEFRAACAAESIP 90 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YLIN G +EKS ++ ++R ++G + H GS Sbjct: 91 A---YVHAPYLINFGSHTEATVEKSVESLRHSLRRGREIGALGVVVHTGSATGGRERSVA 147 Query: 123 LARIAESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LA++ E + LD+ ++E+TAGQG++L + + ++ ++GVC+D Sbjct: 148 LAQVREHLLPLLDELTHDDDPYLLLESTAGQGASLCSRTWDFGPYFEALDAHPKLGVCLD 207 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH FAAG+DL P+ +T TVG L+ +H ND+K G+ DRH ++G G+I Sbjct: 208 TCHIFAAGHDLTGPSGMHQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGSGHI 267 Query: 240 GHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQT 280 G D FR +M +G+PLI+ET + A ++ LK + Sbjct: 268 GEDPFRALMTHPATEGVPLIIETPGGKEGHAADVEQLKKLRD 309 >UniRef50_A2SPZ6 Probable endonuclease 4 n=2 Tax=Methanomicrobiales RepID=END4_METLZ Length = 281 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 7/282 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M +G HVS AG L A RA E F +FT++ R W A P+ + F A Sbjct: 1 MIKLGFHVSIAGSLPLAVSRAQEAGCDTFQIFTRSPRVWAAKPIEPSIAEAFIDALNISG 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H YL N E +S +E+ RC+QL + L H G H + + Sbjct: 61 IGP--VVDHMPYLPNPAAEKPEIYARSIFTMTEELDRCDQLKIPYLVTHLGHHGKEDGHK 118 Query: 121 DCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 ++ +I ALD+++G ++ENTA + + +G F + I D + ++ RVG C D Sbjct: 119 KGQEKVIAAIGQALDESEGETMILLENTANEKNTVGGTFTDIGVISDALSNERRVGFCFD 178 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVG-FKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 TCHA AAGYDL+ E F F G L+ +HLND K GS +DRH LG G Sbjct: 179 TCHAAAAGYDLKGH-GAETVFGWFNDEAGSLDRLKVIHLNDMKGGVGSHLDRHEHLGLGY 237 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQ 278 +G + ++ + I+ET + + + +A + Sbjct: 238 LGEETIHDVLTFPKISHCAFIMETPSDEIRTDKDNLAVARRL 279 >UniRef50_UPI000038E47D endonuclease IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47D Length = 283 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 91/279 (32%), Positives = 153/279 (54%), Gaps = 12/279 (4%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K +G HVS AG + + RAA F +F K+ QW+ P+T + ++ F+ +K+H Sbjct: 13 KLVGGHVSIAGSIGLSPERAAAFGFNTFQIFVKSNLQWKYKPVTEEEVENFRDGVKKFHM 72 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 A+ + H +YL+NLG E +EKS D E++ C ++G+ L HPGS+ + E Sbjct: 73 --AKPVVHATYLLNLGSENRELVEKSMDDIKYEIEVCNRIGVDRLVLHPGSN---SNREI 127 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 L I E +N +T VT +IEN++G+G+ + E + ++D K+++G+C+DTC Sbjct: 128 ALNSIMELLNSL--ETGNVTMLIENSSGKGNTVPATSEEMGKMLDL--SKNKIGICLDTC 183 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA GYDL+ +++ ++ +H+ND+ GS+ DRH ++G G IG Sbjct: 184 HFFAGGYDLKN--GYKESIDSLRSNGITGHIGALHINDSMFDIGSKKDRHENIGNGYIGD 241 Query: 242 DAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQ 279 F I+ D F+ IP+I+ET + ++ + LK+ Sbjct: 242 AGFSNIINDRTFNNIPMIMETPGGDEHYSGNMEKLKSLL 280 >UniRef50_Q3ABA7 Probable endonuclease 4 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=END4_CARHZ Length = 283 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 5/280 (1%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G H+S AGGL R + +F+++ R A P + + F E+Y Sbjct: 1 MNVGLHLSIAGGLLKLKERIIKNKTEGVQIFSRSPRGGEAKPFNEKELKGFLEFKEEYKL 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 ++ H Y++NL P E +KS +++ R +QL L H GSH EE Sbjct: 61 YP--LVVHVPYVMNLASPEEEMFQKSVAMIREDLYRSDQLHADFLVVHVGSHRG-AGEER 117 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 LAR+ E + I L + +IENTAG G+ +G+ +HLA II + +G+C+DTC Sbjct: 118 GLARMVEGLKILLSENFKTRILIENTAGSGNEMGYSLDHLAYIISETGHEE-LGICLDTC 176 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H AAGYD +P +F +G + +H+ND+K GSR DRH +L +G IG Sbjct: 177 HLLAAGYDDVSPEGISAFSREFREKIGEERFCLLHVNDSKHPIGSRKDRHENLEQGYIGR 236 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 + F ++ F +P ILET P E++ LK + E Sbjct: 237 EGFINLLNSPFFKRVPWILETPEP-GIEEDLVKLKKLREE 275 >UniRef50_Q9HJS3 Probable endonuclease 4 n=2 Tax=Thermoplasma RepID=END4_THEAC Length = 281 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 105/279 (37%), Positives = 152/279 (54%), Gaps = 13/279 (4%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H+S AGGL N RAA F F+KNQ +W + PL FK+ KY S Sbjct: 15 IGGHISVAGGLHNGPARAAVFGFPTFQFFSKNQMRWSSPPLKDDEAAAFKSEVRKYGIES 74 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 I H SYLINL + ++S +AF DE+ R ++LG + L HPGS+ D + Sbjct: 75 TMI--HASYLINLASADPDLYKRSMEAFHDEIDRSDKLGSTFLTVHPGSNP---DRADGI 129 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 R+ ++++ D V +IENTAGQG+ +G + + +A IID + ++GVCIDTCHA Sbjct: 130 RRVRDALSTIGDHA--VIILIENTAGQGNVIGTRLDEVAKIIDTSD--KKLGVCIDTCHA 185 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +A+GYDLR EK T+G + HLNDAK GSR+DRH +G+G I Sbjct: 186 WASGYDLR--DSLEKFIESLDYTIGLDRIFAFHLNDAKREMGSRIDRHELIGKGTID-GG 242 Query: 244 FRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTE 281 +++DDR P I+ET + + + ++ ++ E Sbjct: 243 LINLIRDDRLRAKPKIMETPFGEARFEDNLRYMSSKIGE 281 >UniRef50_Q0TX36 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0TX36_PHANO Length = 466 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 155/290 (53%), Gaps = 46/290 (15%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAHVS AG LT + + F A C+++ + Sbjct: 125 VGAHVSTAG------------------------------ALTPEVANLFIAGCKEHGIDA 154 Query: 64 AQIL-PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A+ PH SYL+NL HP +++ D+F+++++RC LG+ L NFHPG+ + E+ Sbjct: 155 AKCCLPHGSYLVNLAHPDPARKKQAFDSFLNDLERCNTLGIKLYNFHPGNA-NATTREEG 213 Query: 123 LARIAESINIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + IA++IN A + V AV+E A G+ +G F LA II V+DK+RVGVC+DT Sbjct: 214 IRLIAQNINEAHQDKASGDVVAVLETMASLGNTIGGTFADLADIIKLVDDKARVGVCLDT 273 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYDLRTP T +F +G KYL+ +H+ND+K+ S D H ++G G +G Sbjct: 274 CHVFAAGYDLRTPEAYAATMKEFDDVIGLKYLKALHMNDSKAPLSSYRDLHANIGTGFLG 333 Query: 241 HDAFRWIMQDDRFDGIPLILETI------------NPDIWAEEIAWLKAQ 278 +F I+ D R G+P++LET + IWA EI L++ Sbjct: 334 LSSFHNIVNDKRLHGLPMVLETPVDSVDENGKKTDDKGIWAREIKMLESL 383 >UniRef50_Q8EWT2 Probable endonuclease 4 n=1 Tax=Mycoplasma penetrans RepID=END4_MYCPE Length = 289 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 11/288 (3%) Query: 2 KYIGAHVS--AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 +G+HV A L + + E D F +FT + + L IDE ++ Sbjct: 6 LLLGSHVGFKAKNYLVGSVLETLEYDGNCFMVFTGPPQNFMRKELDQNLIDEAVKLMKEK 65 Query: 60 H-YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + I+ H YLINLG P + I E+ R Q+ L+ HPGS L Sbjct: 66 NPLLLENIVVHAPYLINLGSPKESTRSLGLNQLIVEINRTNQIHSKLIVLHPGSALDS-D 124 Query: 119 EEDCLARIAESINIALDKTQ-GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + IA+++N A++ T V +E AG+GS +G FE ++ I+ GV++K R+GVC Sbjct: 125 RNVAINHIADNLNKAIEATDNDVIICVETMAGKGSEVGINFEEVSKIVSGVKNKKRIGVC 184 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +DTCH +G D+ P +T +F++ + Y++ +HLND+K+ GSR DRH ++G G Sbjct: 185 LDTCHMHDSGIDISDPD---QTLEEFSKYLDLSYIKVIHLNDSKNEIGSRKDRHDNIGYG 241 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDI---WAEEIAWLKAQQTEK 282 +G D +++ +P ILET D + +EI L +++ ++ Sbjct: 242 KVGFDYLVKWAHNEKLANVPKILETPYRDDKPIYKQEIINLNSKEWKE 289 >UniRef50_A9KNS9 Probable endonuclease 4 n=264 Tax=Bacteria RepID=END4_CLOPH Length = 300 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M IG+HV +G +A A DA F ++T + R ++ ++E ++ Sbjct: 1 MLKIGSHVGMSGKEAFFGSAKEAHSYDANTFMVYTGAPQNTRRKDISDLRLEEGFEFMKQ 60 Query: 59 YHYTSAQILPHDSYLINLG-HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 + + I+ H Y+INLG + + D EM+R + L HPG+H+ Sbjct: 61 HGI--SDIVIHAPYIINLGNSVNLDTYSLAVDFLAKEMERTKAFRSKYLVLHPGAHVG-A 117 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + + +I + +N L + + +E AG+GS +G FE LA I DGV+ R+ VC Sbjct: 118 GVDAGIKQIVQGLNEVLTRDTDLYIALETMAGKGSEIGRNFEELARIYDGVKYNDRLRVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH AGYD+ + + F + +G + + H+ND+K+ G+ DRH ++G G Sbjct: 178 FDTCHTNDAGYDVVN--DFDGVIEQFDKLIGKEQIAVFHINDSKNDRGASKDRHENIGFG 235 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI----------NPDIWAEEIAWLKA 277 +G DA +I+ F +P ILET + + EI L+ Sbjct: 236 TLGFDAISYIVHHSDFIEVPKILETPYVSLPNEKEKSLPPYRYEIEMLRN 285 >UniRef50_B7GRN1 Probable endonuclease 4 n=6 Tax=Bifidobacterium RepID=END4_BIFLI Length = 284 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 139/283 (49%), Gaps = 11/283 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIG+H+S AGG R+ E TAFA F ++ R+ L F A + Y Sbjct: 4 LYIGSHLSTAGGWNALLERSHEEGGTAFAFFPRSPYGKRSKALDPADAATFGARLKAEDY 63 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQL---GLS-LLNFHPGSHLMQI 117 ++ H Y+ NL + +A ++++ + G +N HPG+H+ Q Sbjct: 64 GP--LVVHAPYVYNLAGKDEAKRAFAIEALAEDIELLTAIREAGQEVYINIHPGAHVGQG 121 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ++ I+E +N ++T GV ++E AG+G+ G FE LA I++GV++K+ VGV Sbjct: 122 TK-TGCQLISEGLNQVFERTTGVMVLLETMAGKGTECGRNFEELATIMNGVKNKANVGVT 180 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCH AGYDL + + +G ++ +H+ND++ S DRH ++G+G Sbjct: 181 FDTCHVLDAGYDLVN--DYDGVMRQLDEAIGLAKVKAIHVNDSQFGLDSHKDRHANIGQG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 +G F ++ D +P+ILET P +EI L+ Sbjct: 239 QLGIPFFTRLVNDPIMAKLPMILETKEQTPATHRDEIELLRGL 281 >UniRef50_B7A694 Apurinic endonuclease Apn1 n=2 Tax=Thermaceae RepID=B7A694_THEAQ Length = 276 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 95/286 (33%), Positives = 149/286 (52%), Gaps = 18/286 (6%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR PL ++ F+A E Sbjct: 1 MVRYGFHLSIAGKKGVAGALEEAMALGLTAFQIFAKSPRSWRTRPLAANEVEAFRALKEM 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 AG--GMPAVIHASYLVNLGAE-GELWEKSVMSLADDLEKAAILGVEYVVVHPGSGDPKRV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L ++ +A + + T ++ENTAG G +G +FE LA +++ + C+ Sbjct: 118 KEGALK----ALRLAGVRGK-PTLLLENTAGGGEKVGSRFEELAWLLEDTP----LQACL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHAFAAGYD++ + + + VG + + +HLND+ FGSR+D+H L +G Sbjct: 169 DTCHAFAAGYDVK--EDPKGVLTALDKAVGLERVPVVHLNDSVGGFGSRIDQHAHLLQGQ 226 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEKA 283 IG + + ++ D R G +LET +P+ A + L+ E A Sbjct: 227 IG-EGLKGVLLDPRLRGRVFVLETPRSPEEDAWNLKVLRGWLEEAA 271 >UniRef50_P47477 Probable endonuclease 4 n=2 Tax=Mycoplasma RepID=END4_MYCGE Length = 291 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 11/286 (3%) Query: 2 KYIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 K +G+ +S +A A IDATA +F P + Sbjct: 3 KLLGSFISFKAPNYFVQSAQDAIAIDATALMVFLGPPHSAYRVPFNKMQFSLGYELLKTK 62 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + S ++ H Y+IN + + +E+Q C G L HPGS + Q + Sbjct: 63 NINSNGLVVHAPYIINCASKDPLKQQNAISVLTNEIQLCNLAGAHYLVLHPGSAVAQTTN 122 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 E L + + +N ++KT+ +E AG+G+ +G L +ID + DK R+GVC+D Sbjct: 123 E-ALDNLVKVLNQVINKTKTTVICLETMAGKGNEIGRDLTELKYVIDRIVDKDRIGVCLD 181 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH +G D + F +GF++L+ +HLN++K+ GS+ DRH ++ G I Sbjct: 182 TCHFHDSGIDFS---DLTGVFNTITTKLGFEFLKVIHLNESKNNCGSKKDRHANINAGMI 238 Query: 240 GHDAFRWIMQDDRFDGIPLILETIN-----PDIWAEEIAWLKAQQT 280 G + + + +P+ILET + P I+ EEI+ +++ Sbjct: 239 GFENLMKFISHPQIKDLPIILETPSTSLNYPTIYREEISQIRSWFK 284 >UniRef50_Q14M87 Probable endonuclease iv protein n=1 Tax=Spiroplasma citri RepID=Q14M87_SPICI Length = 308 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 14/286 (4%) Query: 4 IGAHVSAAG---GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 IG+HVS L A + +A A ++T + I EF +K+H Sbjct: 8 IGSHVSMNKQQNYLLGALNESLNNNANAMMIYTGPPQNTIRVSTEQFFIPEFYQQLKKHH 67 Query: 61 YTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 + I+ H Y+INL + E + + +E+ R +++G+ + HPGS + E Sbjct: 68 FDINNIIIHAPYIINLANTTNPSTFEIAVEFLKNEITRADEIGIKTIVLHPGSGVG-APE 126 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + L +I E +N+ L Q +E AG+GS LG F L IID V+ ++GVC D Sbjct: 127 QVGLDQIIEGLNLVLTPNQKAKIALETMAGKGSELGTSFAQLKYIIDNVKLNDKLGVCWD 186 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY L + +F + +G L +H+ND+K+ + DRH ++G G + Sbjct: 187 TCHMHDAGYRLT--EALDDIIIEFEQLIGLNRLLCLHINDSKNPLNAHKDRHENIGYGYL 244 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDI-------WAEEIAWLKAQ 278 G + I+ + DG+ ILET + +EIA +KA+ Sbjct: 245 GFETLLKIIYHPKLDGMIKILETPYVGEKKHAVAPYKDEIAMIKAK 290 >UniRef50_D1XGI6 Apurinic endonuclease Apn1 n=2 Tax=Streptomyces RepID=D1XGI6_9ACTO Length = 279 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 8/278 (2%) Query: 8 VSAAGGLAN-AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQI 66 + AGGLA A E+ A A +F N R W P + F++ C + + Sbjct: 1 MPVAGGLAKIGLGYAKELAAEAVQVFVANPRGWATPPGNPAQDELFRSRCREESIPA--- 57 Query: 67 LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI 126 H YLIN G +E+S + ++R ++G + H GS E LA++ Sbjct: 58 YVHAPYLINFGSHTEATVEQSVRSLRHSLRRAREIGAQGVVVHTGSATGGRPREVALAQV 117 Query: 127 AESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 E + LD+ ++E+TAGQGS+L + + ++ ++GVC+DTCH Sbjct: 118 RERMRPLLDELTHDDDPFLLLESTAGQGSSLCSRTWDFGPYFEALDSHPKLGVCLDTCHI 177 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 +AAG+DL PA +T TVG L+ +H ND+K G+ DRH ++G G+IG Sbjct: 178 YAAGHDLTGPAGMRQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHENIGAGHIGAAP 237 Query: 244 FRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQT 280 F+ I DG+PL++ET + A ++A LK + Sbjct: 238 FQEIFAHPATDGVPLVIETPGGKEGHAADVARLKGLRD 275 >UniRef50_Q2NJF9 Probable endonuclease 4 n=5 Tax=Candidatus Phytoplasma RepID=END4_AYWBP Length = 292 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 140/285 (49%), Gaps = 10/285 (3%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M ++G+HV+ + A A A +++ + + I E + Sbjct: 1 MLFLGSHVAMKKPHNFQGSIQTAISYGANALMVYSGAPQNTIRSKTEELKIKEALKIAQN 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + + ++ H Y+INL +P + D E++R + ++ + HPG++L + + Sbjct: 61 NNLSLNNLVGHAPYIINLANPDKTKRAFAIDFLSQELERFAAMKINKMVLHPGNYL-KTN 119 Query: 119 EEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 ++ ++ IA+S+++ KT+ + +E AG+G+ +G + E L I V++K+RV Sbjct: 120 PQEGISLIAQSLDLIFAKTKHLKTQISLETMAGKGTEIGKRLEELQQIRTLVKNKTRVSF 179 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DTCH F AGYDL+ E+ +GF+ + +H+ND+K+ S DRH ++G Sbjct: 180 CLDTCHLFDAGYDLK--ENLEEIIQKIDSILGFQNVSVIHINDSKNECNSHKDRHENIGF 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWLKAQ 278 G IG + I+ F IP ILET + + EI +K + Sbjct: 238 GKIGFETLLKIIYHRAFVCIPKILETPYINEKEPYKHEIEMIKTK 282 >UniRef50_Q2RJF1 Probable endonuclease 4 n=2 Tax=Clostridia RepID=END4_MOOTA Length = 279 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 9/283 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +GAH+S A GL A A I A F FT+N R A + + I ++ A + Sbjct: 1 MRLGAHLSIAKGLPRTAAMATSIGANTFQYFTRNPRGGAARQIPGKEIQAWREARRRADL 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 I H Y +NLG E +R D+ R + L HPG + + + Sbjct: 61 YP--IAGHLPYTVNLGAAAERQQEFTRMVLHDDTLRVAAIDGEYLISHPGHYEGE--RQA 116 Query: 122 CLARIAESINIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 L RI + I A G ++E AGQG +G + L I++G+ RVGVC+D Sbjct: 117 GLDRIIQLIEEAYLSITPPGPMLLLETMAGQGKEVG-TIDDLCYILEGLGWPDRVGVCLD 175 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 + H FAAG+DLRTPA C++ + A +G ++ MHLND+ + GS DRH +G+G + Sbjct: 176 SAHLFAAGWDLRTPAGCQQLVQELAAKIGLDRVKAMHLNDSAAPLGSHRDRHAGIGKGEL 235 Query: 240 GHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQT 280 G + ++ D +PL LET N + + EEIA ++ ++ Sbjct: 236 GREGIAAVVNDPFLGELPLFLETPVANYEEYGEEIALIQKLKS 278 >UniRef50_Q72KH8 Probable endonuclease 4 n=2 Tax=Thermus thermophilus RepID=END4_THET2 Length = 270 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 18/285 (6%) Query: 1 MKYIGAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M G H+S AG G+A A A + TAF +F K+ R WR L+ ++ F+A E Sbjct: 1 MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + H SYL+NLG E EKS + D++++ LG+ + HPGS + Sbjct: 61 SG--GLPAVIHASYLVNLGAE-GELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERV 117 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 +E L ++ +A +++ V ++ENTAG G +G +FE LA ++ + VC+ Sbjct: 118 KEGALK----ALRLAGVRSRPV-LLVENTAGGGEKVGARFEELAWLVADTP----LQVCL 168 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHA+AAGYD+ + R VG + + +HLND+ GSRVD H L +G Sbjct: 169 DTCHAYAAGYDV--AEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGK 226 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTEK 282 IG + + + D R ILET P+ A + L+A E Sbjct: 227 IG-EGLKRVFLDPRLKDRVFILETPRGPEEDAWNLRVLRAWLEEA 270 >UniRef50_A9FH43 Nfo protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FH43_SORC5 Length = 323 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 120/293 (40%), Positives = 167/293 (56%), Gaps = 12/293 (4%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M + GAH S AGGL A A E +FTK QWR L+ + I F+AA + Sbjct: 4 MIF-GAHESVAGGLHRAIALAGEDRCEVVQIFTKVSGQWREPALSAEQIAAFRAARAAWA 62 Query: 61 YTSAQI---LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 A + L H SYLINL LE+SR+A E+ RC+ LG+ + FHPG+H + Sbjct: 63 GAGAGVGRTLAHASYLINLCADDAAILERSREALFQELARCDALGIDFVVFHPGAH-RSL 121 Query: 118 SEEDCLARIAESINIALDKTQGVT--AVIENTAGQGSNLGFKFEHLAAIIDGV-EDKSRV 174 EE L RI ES++I L + +G+ IENTAGQGS LG + + +AA+I+ + SR+ Sbjct: 122 GEEAGLDRIGESLSIVLSRGKGLRARLCIENTAGQGSTLGDRVDQIAAMIERAGPEGSRL 181 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 GVCIDT HAFAAG+DLR+ A E+ ++DF R +G L+ MH+ND+K+ G RVDRH + Sbjct: 182 GVCIDTQHAFAAGHDLRSEAGYERFWSDFGRLLGLHRLQCMHVNDSKAALGQRVDRHERV 241 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEKA 283 G+G +G F + D R +P ++E + EEIA L+A + Sbjct: 242 GDGEMGLAPFWRLANDARLARVPAVIELPPLSKERRGYLEEIARLRALEGAAE 294 >UniRef50_D2SAA5 Apurinic endonuclease Apn1 n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SAA5_9ACTO Length = 296 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 131/289 (45%), Gaps = 12/289 (4%) Query: 1 MKYIGAHVSAAGGLANA-AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 M IGAH+ GGLA + A A +F N R WR P + F A C + Sbjct: 1 MPPIGAHIQIKGGLATGGLAYTDAVAARAVQVFVGNPRGWRLTPGDPRQDARFTAGCAER 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 S H +L+N+G P +E+S + R QLG + H GS + + Sbjct: 61 GVPS---FIHTPFLVNVGSPTEATVEQSVATIAHNLARGAQLGCRGVVVHAGSAVGEDRY 117 Query: 120 EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 ED L ++ E + L+ G ++E TAG G +L E L +E +GVC Sbjct: 118 EDALRQLHERLLPVLEAAPDDGPRLLVEPTAGGGRSLAATVEDLGPYFAALEHHPLLGVC 177 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 DTCHA+AAG++L P T TVG L +H ND+ GS+ DRH ++G G Sbjct: 178 FDTCHAWAAGHELTVPGGMAGTLDALEATVGPGRLGLVHANDSLDECGSKRDRHTTIGAG 237 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDI------WAEEIAWLKAQQT 280 +IG F ++ G+P+++ET + A +IA L + + Sbjct: 238 SIGVAPFAELLAHRSVAGVPVVVETPSERDGVASAGHAADIALLCSLRD 286 >UniRef50_C1A9M8 Endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9M8_GEMAT Length = 293 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 110/284 (38%), Positives = 154/284 (54%), Gaps = 10/284 (3%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 +GAH+S AGG AA RA E+ ATA +FTK +W + F+ A Sbjct: 14 LGAHMSVAGGSWEAAPRAREVSATAMQIFTKQANRWAEREVDAVEATRFREALSATSVRW 73 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 HDSYLINL P+ E E+S +F E++RC LGL L HPG+ + + Sbjct: 74 --CCAHDSYLINLASPMPELRERSVLSFRAELRRCHALGLDALVSHPGNFID--DRPSGI 129 Query: 124 ARIAESINIALDKTQGV-TAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDT 180 AR A+ I AL+ G ++E TAGQG+ LG FE +A ++ + + R+GVC+DT Sbjct: 130 ARNADGIIEALEAEPGPTRLLMELTAGQGTVLGSTFEEMADLLSRIPSALRGRMGVCLDT 189 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H +AAGYDL + + +A T+GF L +HLND+K+ S +DRH +GEG+IG Sbjct: 190 AHVWAAGYDLIN--AYDDMWTRYADTLGFASLGCLHLNDSKARLASHLDRHDLIGEGSIG 247 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAE-EIAWLKAQQTEKA 283 D FR IM D+R +P +LET D AE + L ++ A Sbjct: 248 ADVFRRIMTDERLTHVPKVLETPKGDSPAETDARMLHRLRSYAA 291 >UniRef50_B0S196 Probable endonuclease 4 n=2 Tax=Finegoldia magna RepID=END4_FINM2 Length = 277 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 10/282 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IG H+S + GL + EI+A F F +N R ++ + + ID+F + ++ Sbjct: 1 MNRIGCHLSTSKGLHKTIEQCLEINADTFQFFPRNPRGSKSRLIPKKEIDKFLELRKIHN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +I+ H +Y +NL + + + ++M++ + + ++ HPGSH Q E Sbjct: 61 IN--KIVCHGAYTMNLCSDREDLRKLAVKLINEDMKKIQDMRINHYVLHPGSHKNQ-GIE 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + L I E IN D + G IE +G+GS LG + +A II+ + VCIDT Sbjct: 118 EGLKLIVEGINKV-DVSNGQMICIETMSGKGSELGCDIDQIAYIINNASIP--LYVCIDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH F++G L + +F + +G ++ +H ND+ FG+ DRH G+G IG Sbjct: 175 CHLFSSGIRLDN---FDDYLDEFDKKIGIDKIKVIHCNDSMMPFGANKDRHEKFGKGLIG 231 Query: 241 HDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLKAQQTE 281 ++ ++R P+ILET N D + EI ++ E Sbjct: 232 EQDLFNVIFNERLKDRPIILETPNDLDGYKIEIEEIRRNFNE 273 >UniRef50_C6HDL7 DNA lyase n=3 Tax=Onygenales RepID=C6HDL7_AJECH Length = 528 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 42/283 (14%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 ++GAH+SAA G+ NA + I Sbjct: 152 MFVGAHISAAKGVQNAVTNSLYIG------------------------------------ 175 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +LPH SYL+NL +++ D+F+D+++RCE+LG+ L NFHPG+ + S E Sbjct: 176 ---HVLPHGSYLVNLAQEDPTKAKQAYDSFLDDLKRCEELGIKLYNFHPGAT-NKASLES 231 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCID 179 L+R+A+++ AL T V V+E G G+ +G H +++ + + +SR+G+C+D Sbjct: 232 SLSRLAQALVSALKATTTVVPVLETMCGHGTTIGGPLSHFKSLLALIPNTYRSRIGICVD 291 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH+FAAGYDLR+P+ +F +G +YLR HLND+K+ GSR D H ++G G + Sbjct: 292 TCHSFAAGYDLRSPSSWNSFMEEFDNEIGLQYLRAFHLNDSKTPLGSRRDLHANIGTGFL 351 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 G AF +M D R +GIP+ILET E + ++ Sbjct: 352 GLRAFHNLMNDKRLEGIPMILETPIDRPAKSEAEMATGKLDDE 394 >UniRef50_D2RYB0 Apurinic endonuclease Apn1 n=5 Tax=Halobacteriaceae RepID=D2RYB0_9EURY Length = 289 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 137/294 (46%), Gaps = 21/294 (7%) Query: 2 KYIGAHVSAAGG-------------LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQT 48 +GAHVS +G L NA R +FT + + W ++ + Sbjct: 1 MKVGAHVSISGSRVSSDDETPPYDDLRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISDEA 60 Query: 49 IDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNF 108 D F+ ++ + H +YL+NL P + KS+++ E+ QLG+ +N Sbjct: 61 ADGFREESDERLEGPW--VIHSAYLVNLCTPKDDLRRKSKESMQAELDAAAQLGIPYVNV 118 Query: 109 HPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 H G+H E L A I+ L+ + V +IE+ AG G+ LG +F HLA IID Sbjct: 119 HLGAHTG-AGVEGGLDNAASLIDE-LEVPEDVQILIESDAGSGTKLGGEFSHLAGIIDRT 176 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 E +G+CIDT H AG DL TP ++T F VG +YL +HLND+K G+ Sbjct: 177 ETD--IGICIDTAHTLVAGNDLTTPEAVDETVGRFDDEVGLEYLEYIHLNDSKHDVGTHK 234 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPD--IWAEEIAWLKAQQT 280 D H +GEG IG D + I+ +P LET D +A I +K + Sbjct: 235 DEHALIGEGYIGEDGMKAIVNHPDLRDLPFALETPTEDGKGFAWNIEKVKELRD 288 >UniRef50_B9XFU8 Apurinic endonuclease Apn1 n=1 Tax=bacterium Ellin514 RepID=B9XFU8_9BACT Length = 268 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 102/266 (38%), Positives = 134/266 (50%), Gaps = 5/266 (1%) Query: 17 AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINL 76 A RA I +F KN QW P + + A I H YLINL Sbjct: 2 ALKRAVSITGEICQIFVKNNMQWFGKPYMPDDLRLYANEVAANKL--ASIFGHTGYLINL 59 Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDK 136 G +E EKS + + E+ LGL L HPG+HL EE + +IA ++ A Sbjct: 60 GAQASENREKSIKSLVQEINMATDLGLPFLVMHPGAHLG-TGEEAAIKQIAAGLDEAFQA 118 Query: 137 TQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPA 194 T+ V +ENTAGQG+ LG + HLA I V R+GVC+DT H F AGYDLRTP Sbjct: 119 TKHSPVRIALENTAGQGTCLGHEIRHLAEIFQKVNRPERLGVCLDTAHFFEAGYDLRTPK 178 Query: 195 ECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFD 254 + +G K + HLND+K+ GSRVDRH +GEG IG +AFR I+ D+RF Sbjct: 179 GWNAAIGEVENFIGVKQVLAFHLNDSKTDLGSRVDRHAGIGEGKIGREAFRHIVNDERFR 238 Query: 255 GIPLILETINPDIWAEEIAWLKAQQT 280 +P LET E++ L ++ Sbjct: 239 DLPGCLETPKSADMHEDVENLAILRS 264 >UniRef50_C5G113 DNA lyase n=1 Tax=Microsporum canis CBS 113480 RepID=C5G113_NANOT Length = 468 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 102/264 (38%), Positives = 152/264 (57%), Gaps = 23/264 (8%) Query: 37 RQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEALEKSRDAFIDEM 95 R+W PL + D F+ AC +Y +A+ ILPH SYL+NL + + D+F+D++ Sbjct: 145 RKWDNPPLQEEHRDRFRRACIDNNYDAAKHILPHGSYLVNLAQEDPAKAKVAYDSFLDDL 204 Query: 96 QRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLG 155 +RCE LG+ L NFHPG+ + S E L+R+A+++ ALD T+ V V+E G G+ +G Sbjct: 205 RRCEALGIKLYNFHPGAT-NKTSLESSLSRLAKALISALDATETVIPVLETMCGHGTTIG 263 Query: 156 FKFEHLAAIIDGVE--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLR 213 H + + R+GVC+DTCH+FAAGYDLRTPA E+ +F TVG ++LR Sbjct: 264 GPLSHFRDLFALIPESYHPRLGVCVDTCHSFAAGYDLRTPAGWERFMTEFDETVGLRFLR 323 Query: 214 GMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI---------- 263 HLND+K+ GS+ D H ++G G +G AF +M D R +G+P++LET Sbjct: 324 AWHLNDSKTPLGSKRDLHANIGTGFLGLRAFHNLMNDKRVEGMPMVLETPIDRPVEGPGG 383 Query: 264 ---------NPDIWAEEIAWLKAQ 278 + +WA EI L++ Sbjct: 384 SAKGKKTVEDKSVWAAEIKLLESL 407 >UniRef50_A5IYT8 Probable endonuclease 4 n=8 Tax=Mycoplasma RepID=END4_MYCAP Length = 278 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 13/280 (4%) Query: 1 MKYIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M +G+H+S L AA + A ++ + + + +E+ K Sbjct: 1 MIKLGSHISFKSPNYLLGAAAESVNNKANCMMIYLGAPQTTKRVSVEKYKYNEYLEKYSK 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 T I+ H Y++N + + D + E+++ +G L HPGS+ S Sbjct: 61 L-ITPDDIIVHAPYIVNPSSVSKN--KFAIDFLVQEIEKMNYIGAKYLVLHPGSYTTF-S 116 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 ++ L S+ L +T+ V +E AG+G+ +G F+ + I + + R VC+ Sbjct: 117 VQESLDTFIASVKQILSRTKDVVICVETMAGKGAEVGINFDQINYFIHKIRN-DRFAVCL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCH F AGYD+R E + + + +++ +HLND+K++ GS DRH ++ +G Sbjct: 176 DTCHIFDAGYDIRKYEEFKA---EINKYNLLPHIKVIHLNDSKNSLGSHKDRHANIDKGF 232 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPD---IWAEEIAWL 275 IG + + D FD IP+ILET D I+ +EI L Sbjct: 233 IGLETLAKFVHDPDFDNIPIILETPWVDNKPIYDQEIKML 272 >UniRef50_B8DP20 Apurinic endonuclease Apn1 n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DP20_DESVM Length = 300 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 95/274 (34%), Positives = 132/274 (48%), Gaps = 12/274 (4%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 +S AGGL A A + A A +FT NQR+W + F+AA + + Sbjct: 1 MSVAGGLWRAVEHAVSVGAQALQVFTANQRRWEVPCPSDGDARRFRAAVSDWG--GGFVA 58 Query: 68 PHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE---EDCLA 124 H SYL NL P A +S E+ RC LG+ + HPG+HL E + Sbjct: 59 SHASYLFNLASPDEGAGARSVRGLAAEIGRCGLLGIPWVVLHPGAHLEGGDRQAVEHGVH 118 Query: 125 RIAESINI-------ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 R+A + GV ++ENTAGQG+ LG L I+D + R+GVC Sbjct: 119 RVAARLAAAFDAAGHLHPHADGVGVLLENTAGQGTCLGGDVADLGRIVDACPARERLGVC 178 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 IDT HA AAGYDL T + A VG +R H+ND+ + G+R DRH +G G Sbjct: 179 IDTAHACAAGYDLATEEGYARLMAAVEGAVGLGRVRLFHVNDSATPCGARSDRHAHIGLG 238 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 ++G F +++D RF P++LET AE+ Sbjct: 239 HVGAAGFARLVRDPRFAAHPMVLETHKGKDMAED 272 >UniRef50_D1J801 Endonuclease IV n=3 Tax=Mycoplasma RepID=D1J801_MYCHP Length = 283 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 13/280 (4%) Query: 1 MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M +G+H+S L + A F ++ + + I+++ C Sbjct: 1 MIKLGSHISFKKPDYLIGSFNEAINNGENCFMIYLGAPQSAFRVDSSLYNIEKYLKQCNS 60 Query: 59 YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 + I+ H Y++NL E ++ E++R G LL HPGS + + S Sbjct: 61 I-IPVSDIVVHAPYIVNLA--NREKVDFGIKFLCSEIKRMNSFGAKLLVLHPGSSV-EYS 116 Query: 119 EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + LA + +S+ ++ T+ V +E +G+GS + F L +I V + R+ +C+ Sbjct: 117 RSEALASLIQSLKKIIESTKDVIICLEIMSGKGSQICSNFNDLLYVIKSV-NSERIAICL 175 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DTCHA+ AGYD++ + +R +HLND+ + GS+ DRH ++ +G+ Sbjct: 176 DTCHAWDAGYDIKDYENFKSYIKQ---QNILPLIRVIHLNDSMNELGSKKDRHANIDKGH 232 Query: 239 IGHDAFRWIMQDDRFDGIPLILETI---NPDIWAEEIAWL 275 IG + + + D FD IP+ILET N + +EI L Sbjct: 233 IGLEILKKFVHDKDFDNIPIILETPFINNKSPYKDEIIML 272 >UniRef50_C0ZBK5 Putative endonuclease IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBK5_BREBN Length = 280 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 9/280 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G HVS G AA A A++F F KN R P + + +A C++ Sbjct: 1 MQVGCHVSIRHGYGEAARTAYNEGASSFQFFPKNPRSLGIKPFDARDAERCRAFCQQNGM 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 S + H Y +NL E + + ++++ E G + H G + Sbjct: 61 LS---IAHTPYPVNLCVEEQELFAVTVGSVRNDLEIAEACGALGVVVHFGQYKG-ADVLA 116 Query: 122 CLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + +N LD G +IEN AGQG+ +G E L + + +VG C+DT Sbjct: 117 GYKFMIQMVNQILDGWNGKAQLLIENNAGQGNRMGTTLEELTQVRQLFAEPQKVGFCLDT 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHAFA+G L + + F LR +HLND+ GS DRH S+G+G IG Sbjct: 177 CHAFASG--LWKGNDWGEVADRMRELEYFTSLRAVHLNDSVYPSGSFRDRHASIGKGMIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 A +Q G+P++LET + EEI ++ Sbjct: 235 DAAIATFLQTPELQGLPIVLETARGSEGGHGEEIKHVRLL 274 >UniRef50_C1AC86 Putative endonuclease IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC86_GEMAT Length = 299 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 20/301 (6%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAP-LTTQTIDEFKAACEKY 59 M +G+H GG+ AA RA A +F+ + + + + + ++ A E Sbjct: 1 MLLLGSHCLDEGGIPMAARRAGRAGMQALQVFSAVPKFYNDKVGVKPERLARWQEALEIA 60 Query: 60 HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 ++ H +Y++N P E ++ E +R LG+ + FHPG+ Sbjct: 61 GIRPEHVIVHAAYVLNCATPDEEKWARAAAGLAKEFERSTTLGVKGVCFHPGAAT-DGDR 119 Query: 120 EDCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVG 175 + +AR++E++ AL +IENTAG G+ +G E + A++ G+ D+ R G Sbjct: 120 DAAIARVSEAMRRALAAVPEGRTRLLIENTAGAGTTVGRTPEEVGAMLRGIPAADRHRTG 179 Query: 176 VCIDTCHAFAAGYDL-RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 +DTCH FA+G+ + + A + F + G + +HLND++ GS DRH + Sbjct: 180 YGLDTCHLFASGFPIAESRAALTEVLDAFEQATG-EPPAFLHLNDSEGACGSNKDRHRCI 238 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWA-----------EEIAWLKAQQTEK 282 GEG IG F W++QD R GIPLILET + A + IA L+A E Sbjct: 239 GEGLIGATPFGWLLQDRRAQGIPLILETPQEIETVADDDDTPDPWDVKSIALLRALAQET 298 Query: 283 A 283 A Sbjct: 299 A 299 >UniRef50_A2QVN1 Contig An11c0060, complete genome n=8 Tax=Eurotiomycetidae RepID=A2QVN1_ASPNC Length = 436 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 147/260 (56%), Gaps = 13/260 (5%) Query: 26 ATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGHPVTEAL 84 AFALF K+QR+W L D+F+ C ++ Y A+ ILPH SYL+NL Sbjct: 38 GNAFALFLKSQRKWDNPALQDDHRDQFRNLCIEHKYDGAKHILPHGSYLVNLAQEDKAKA 97 Query: 85 EKSRDAFIDEMQRCEQLGLSLLNF---------HPGSHLMQISEEDCLARIAESINIALD 135 +++ DAF+D+++RCE LG++L NF HP + Q S + R+A ++ AL Sbjct: 98 KQAYDAFLDDLRRCEALGITLYNFQYIPLPYTPHPTNPANQTSHASAITRLAAALTSALA 157 Query: 136 KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE--DKSRVGVCIDTCHAFAAGYDLRTP 193 T VT V+E G GS +G I+ + R+G+CIDTCH+FAAGYDL +P Sbjct: 158 ATSTVTPVLETMCGHGSTIGGYLHEFRDILSQIPKEYHHRIGICIDTCHSFAAGYDLASP 217 Query: 194 AECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRF 253 + +F+ +G +YLR +HLND+K+ GS+ D H ++G G +G AF +M + RF Sbjct: 218 SGFASFMQEFSDVIGIQYLRALHLNDSKAPRGSKRDLHANIGTGFLGLRAFHNVMNEPRF 277 Query: 254 DGIPLILETINPDIWAEEIA 273 G+P+ILET D EI Sbjct: 278 QGLPMILETP-IDRPESEIK 296 >UniRef50_Q03SD7 Endonuclease IV n=4 Tax=Lactobacillus RepID=Q03SD7_LACBA Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 15/288 (5%) Query: 3 YIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 IG+HVS G L +A AA+ F ++T + R + I K + Sbjct: 5 LIGSHVSMKGKEMLLGSAQEAAQYGENVFMIYTGAPQNTRRKSIEGLNIPAAKTFMAAHE 64 Query: 61 YTSAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE 119 +I+ H Y++NLG+ + + E+QR LG + HPG+H+ + Sbjct: 65 QR--EIVVHAPYVVNLGNTVKPANFQFAISFLTAEVQRAAALGAKQIVLHPGAHVGAGAP 122 Query: 120 EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 I V +E AG+G+ +G FE LAAIID ++ VC D Sbjct: 123 AAIAQIAQGLDTILTAAESPVQIALETMAGKGTEVGRSFEELAAIIDAPPHNDQLSVCFD 182 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 TCH AGY + T + + +F +G L+ +HLND+K+ GS DRH ++G G + Sbjct: 183 TCHTSDAGYAIAT--DFDGVLNEFDHVIGLDRLKVVHLNDSKNPQGSHKDRHTNIGLGTL 240 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIWAE--------EIAWLKAQQ 279 G D + + +P I+ET + E+A LK QQ Sbjct: 241 GFDVLNAVAHHPQLTTVPKIMETPVIGPDRKHGVNPHGYEVAMLKHQQ 288 >UniRef50_C1XQR8 Endonuclease IV n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XQR8_9DEIN Length = 282 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 17/279 (6%) Query: 5 GAHVSAAG--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 G H+S AG G+A A A + + F +F K+ R W+ L ++ F+A E + Sbjct: 7 GFHLSIAGKQGVAGAVAEAQRLGLSGFQIFAKSPRSWKTRNLGPGEVERFRAGRENLGHL 66 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A I H SYL+NLG E EKS + D++ + + LG+ L+ HPGS + E Sbjct: 67 PAAI--HASYLVNLGAT-GELWEKSIFSLADDLTKAQVLGIELVVVHPGSGEKKRIREGA 123 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 L ++ +A +G ++ENTAG G +G + E LA +I+G +GVC DTCH Sbjct: 124 LR----ALELAQIGKRGPKLLLENTAGGGERIGSRLEDLAWLIEGTP----LGVCFDTCH 175 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 AFAAGY L E E+ + + +G + + +HLND+ +GS +D+H +L +G IG + Sbjct: 176 AFAAGYPLH--LEPERVIEELDQEIGLERVPLIHLNDSVGAWGSHIDQHANLRQGRIG-E 232 Query: 243 AFRWIMQDDRFDGIPLILETINPDIW-AEEIAWLKAQQT 280 A R ++ R G ++ET + A +A L+ Sbjct: 233 ALREVVCHPRLRGKLFVMETERGETHDAHNLATLRRWLE 271 >UniRef50_A1FAW5 Endonuclease 4 (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FAW5_VIBCH Length = 200 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 140/199 (70%), Positives = 161/199 (80%) Query: 85 EKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVI 144 +KSR AF+DEM RC+QLGL+LLNFHPGSHL Q+SEE CLA IAESIN+A + V AVI Sbjct: 1 DKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVSEEACLATIAESINLAHRQVPNVIAVI 60 Query: 145 ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFA 204 ENTAGQGSNLG++FEHLAAIID VEDK RVGVC+DTCH FAAGYDLRT A C++TFA+F Sbjct: 61 ENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTCHTFAAGYDLRTKAACDETFAEFE 120 Query: 205 RTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETIN 264 R VG YLR MH+ND+K SRVDRHHSLG G IG + F +I QD RF+GIPLILETI+ Sbjct: 121 RVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGWECFEYIAQDARFNGIPLILETID 180 Query: 265 PDIWAEEIAWLKAQQTEKA 283 PDIWA EIA L+ T+K Sbjct: 181 PDIWATEIATLRKFSTQKE 199 >UniRef50_Q6L051 Endonuclease IV n=1 Tax=Picrophilus torridus RepID=Q6L051_PICTO Length = 273 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 15/274 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH+S G+ N A ++ AF +F K+ R W+ I F+ K++ Sbjct: 7 KLGAHISIGNGIENVPEIAHSMNFNAFQIFVKS-RSWQEKEYKYDEIANFRNNVRKFNIE 65 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H YLINL E +KS + +E++ C LG+ L HPGS+ + Sbjct: 66 GT--VAHAIYLINLASEN-EIRKKSINDLNNEIKICNDLGIDYLVVHPGSNP---DRKKG 119 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + ++ +T +IEN++G+G+ ++ IID + DK G+C+DTCH Sbjct: 120 IKMAIDAFQSM--ETGSTKILIENSSGRGNTFPSDINEMSGIIDSL-DKKHFGLCLDTCH 176 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A++ GYDL + + + + +HLND+K+ F S+ D H + G G IG Sbjct: 177 AYSYGYDLCKYDDFIYYM---GKKLELSRINVIHLNDSKTEFASKKDLHENPGSGRIG-S 232 Query: 243 AFRWIMQDDRFDGIPLILETINPD-IWAEEIAWL 275 R I D F I+E+ + + + + +L Sbjct: 233 CLRSIFYDRNFKDSTFIMESPDIERSHEKNLNFL 266 >UniRef50_C6CUT5 Apurinic endonuclease Apn1 n=2 Tax=Paenibacillus RepID=C6CUT5_PAESJ Length = 276 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 9/280 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 YIG H+S G A+AA A AF F KN R + + C++Y Sbjct: 1 MYIGRHLSIKEGYASAAKAAYSGGINAFQYFPKNPRSLGLKSFDRREAERCAELCKQYDI 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + + H Y NL + +++ ++ ++++ G + H G + + Sbjct: 61 LT---IAHSPYPTNLASEREDVRQRTVESLLNDLDIANSCGSIGVVVHFGVYKGKEPL-A 116 Query: 122 CLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 I +S+N + G +IE +G+ + +G E LA I + +++ C+DT Sbjct: 117 GYQSIIQSLNEVTSRWNGNAKLLIEIQSGEHTFMGTTIEELAQIRGLCAEPAKLAFCLDT 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FA+G L + +++ +H ND+ G+R DRH +LG G+IG Sbjct: 177 CHMFASG--LWHGETDAEWLKKAVSLGVLEHVAAVHFNDSMFAAGARRDRHAALGSGHIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDI--WAEEIAWLKAQ 278 +W+M G+P ILET + + + ++ ++ Sbjct: 235 EAGLKWLMSVPALAGVPFILETPSDEDGSYGRQLNLMREW 274 >UniRef50_Q1AWW5 Endonuclease IV n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWW5_RUBXD Length = 289 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 87/281 (30%), Positives = 123/281 (43%), Gaps = 16/281 (5%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG H+ +GGL RAA++ A +F N + W P + D A K Sbjct: 8 IGRHLPTSGGLKRTLERAAQLGCEALQIFVSNPQGWAPPP---ERPDAGVLARGKLGAGL 64 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH--LMQISEED 121 ++ H YLINL P E E+S A E+ +LG L+ H GSH + + Sbjct: 65 CPVVAHAKYLINLSSPDGELRERSVRALAAELVAAGRLGADLVVVHAGSHGGEGEERGME 124 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 LAR ++ G V+EN+ G G+ L F L + V VC+D Sbjct: 125 RLARGLDAARGLAASLGGRAAEPVVENSCGAGTQLCSSFAALGRLARLAG----VRVCVD 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T HAF AGYDL TP + + + +HLNDA++ GSR D H +GEG I Sbjct: 181 TAHAFVAGYDLSTPEGAAGVAGELGEHLD-GRVALLHLNDARNGLGSRRDGHAKVGEGRI 239 Query: 240 GHDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQ 278 +F + G+P ++ET P+ A EI +K Sbjct: 240 PPGSFAALF--AALPGLPAVMETPYGTPEEDAREIERVKEL 278 >UniRef50_C7LZK8 Apurinic endonuclease Apn1 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZK8_ACIFD Length = 278 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 120/280 (42%), Gaps = 10/280 (3%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G HVSAAGG+ RA E A+ F + R WR + D + A ++ Sbjct: 1 MRVGCHVSAAGGVLKMLERAGERGASVAQCFLGSPRSWRWSVGVAPEPDVVREAAQRAGV 60 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 +I+ H SYLINL + ++S E +G + H GS + Sbjct: 61 E--RIVVHASYLINLASVDAKLRDRSLALLRQTAIAAEGIGAESVVVHAGSAPGD-DPDA 117 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 RI E + L+ T + ++EN A ++ L A+ + K RVGVC+DT Sbjct: 118 ARQRIREGLERVLEATSTIRILVENPA--TGSVASGPAELGALAGALRTK-RVGVCLDTQ 174 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 H FA G+ + A E+ + H ND+ S G DRH ++GEG IG Sbjct: 175 HLFAVGWAIDEAAGREEIVTALQAA--QVPVALWHCNDSASERGRGRDRHANIGEGAIGA 232 Query: 242 DAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQ 279 +A ++ D R ++LE AE++A ++A Sbjct: 233 EALCSLVADRRLPEADVVLEVPGAGDGPRAEDVAAVRALL 272 >UniRef50_B5YFN4 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFN4_THEYD Length = 280 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 7/280 (2%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M+ +G H S + NA A + F +F + R W+ + I++FK ++ + Sbjct: 1 MRPLGVHTSIKESILNAIEEAKNLQCETFQIFLHSPRIWKIPEFEEEIIEKFKKKIQENN 60 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + H SYLINL + + S+ E+ + LG H + + E Sbjct: 61 LSPF--VVHASYLINLISSNPKTINSSKYLLKREVLMSDLLGADYYVIHLKDNREMQN-E 117 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + ++ E+ + Q +IENTA S + + L + ++ GVCIDT Sbjct: 118 EIFDKVREAFSKIGK-LQKCKILIENTA--KSKITARISDLFDTFKNINTENVSGVCIDT 174 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CH FAAGYD+ + + F ++ +HLND+K++ GS +DRH +G GNIG Sbjct: 175 CHLFAAGYDISNEKVISEFIEEVKNFGDFNLIKLIHLNDSKASVGSGIDRHEHIGRGNIG 234 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 F + +PLILET ++I L A + Sbjct: 235 IKGFENFFKIKEISHVPLILETPKKSP-QDDIKNLTAVRE 273 >UniRef50_UPI0001788006 apurinic endonuclease Apn1 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788006 Length = 282 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 14/279 (5%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS GG AA AA I + A+ F KN R + C++ Sbjct: 5 VRIGSHVSTRGGFLAAAQHAAGIGSLAYQYFPKNPRSLHLKTPDVRNAAACAKFCQEQGL 64 Query: 62 TSAQILPHDSYLINLG---HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS 118 S + H Y N+ + + D+ +++ E G + H G HL + Sbjct: 65 VS---IAHTPYPTNMAVGLTRGEAFYQLTVDSLKNDLMIAEACGSLGIVVHFG-HLKSEN 120 Query: 119 EEDCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + I +N L G +IEN AG ++G E + + ++G C Sbjct: 121 VLEGYQNIIRCMNDVLSSWTGRAKLLIENQAGDHGSMGMTLEESVKVRQLADYPEKIGFC 180 Query: 178 IDTCHAFAA-GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 +DTCH FAA G+DL E + A ++ +HLND+K GSR DRH +G+ Sbjct: 181 LDTCHLFAAGGWDLSNTDELLARGKELAY---WESAVAVHLNDSKYGAGSRKDRHARIGQ 237 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETIN--PDIWAEEIA 273 G IG +A + ++ G +LE+ E+IA Sbjct: 238 GMIGTEALKRLVLAPELAGKAFVLESEKGADGTHREDIA 276 >UniRef50_Q5UPY4 Putative endonuclease 4 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=END4_MIMIV Length = 312 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 16/293 (5%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 IG H++ + G +A A I + F +F +Q + + EF K+ Sbjct: 21 RIGRHINISKGFVSAPEYAKNIGCSVFQIFLGAPQQILSKARQKDELIEFGKQLIKHDLI 80 Query: 63 SAQILPHDSYLINLGHP-VTEALEKSRDAFIDEMQRCEQLG--LSLLNFHPGSHL--MQI 117 + H SY INL HP ++ E S + + ++ +G + H G ++ ++ Sbjct: 81 M---VVHGSYTINLCHPPGSKKFETSIKSLVKDLNATNLIGDRCLGVIIHMGKNISENKL 137 Query: 118 SEEDCLARIAESINIALDKTQG-VTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRV 174 + + + I AL +T T V+E A QGS + + LA I + D + RV Sbjct: 138 TVDQAIDNYVTGIKTALSQTPDNTTIVLETGASQGSEVASHIDGLAQIYWCLNDAERERV 197 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 CIDTCH +A GYD+ +P +K F +F + +G + + +H ND+K+ S+VDRH L Sbjct: 198 YFCIDTCHIWATGYDISSPTGVKKFFKEFDKKIGVEKISCIHFNDSKTGLESKVDRHADL 257 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETI----NPDIWAEEIAWLKAQQTEKA 283 G IG + + I + + I LI+ET NP+ +EI++ + K+ Sbjct: 258 CYGEIGSNGLKAIAKFAKEYKIHLIMETPLDAINPET-NQEISYNEEYNKVKS 309 >UniRef50_B2HSJ8 Probable endonuclease 4 n=49 Tax=Bacteria RepID=END4_MYCMM Length = 252 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 28/279 (10%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG+HVS LA A A +F N + W+A + Sbjct: 1 MLIGSHVSPQDPLAAAQAE----GAEVVQIFLGNPQSWKAPKPREDAA--------QLKA 48 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + I H YLINL + SR +G + + H G ++ Sbjct: 49 AALPIYVHAPYLINLASANNKVRIPSRKILQQTCDAAADIGAAAVIVHGGHVADDNDLDE 108 Query: 122 CLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTC 181 R ++++ V +ENTAG + F+ +A + D + D +G C+DTC Sbjct: 109 GFQRWRKALDQL---QTDVPVYLENTAGGEHAMARHFDTIARLWDVIGDTG-IGFCLDTC 164 Query: 182 HAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 HA+AAG L + K + +H ND++ GS DRH +LG G I Sbjct: 165 HAWAAGEQLVHGVDRIKAV--------TGRIDLVHCNDSRDAAGSGRDRHANLGAGQIDP 216 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 + ++ P+I ET + ++IA+L+ + Sbjct: 217 ELLVAAVRA---ADAPIICET-AEEGRKDDIAFLREKLN 251 >UniRef50_B5Y8U6 AP endonuclease, family 2, putative n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8U6_COPPD Length = 269 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 16/283 (5%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M Y G H++ + G + E+ +F +F ++ W P+ E + Sbjct: 1 MVYTGIHLNISDGTDAILKQIDELQIDSFQIFLESPLSW--TPMKGLYRFESLIERARND 58 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + H YL++L P KS +++ LG+ H L E Sbjct: 59 FGVKTVFVHSPYLVHLASPRGSVRTKSWKKLKEDLSLASDLGIDGYVAH----LDMQHPE 114 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 L + E + + ++EN A +G + + +C+DT Sbjct: 115 QELVFLEEYSRYLSMISSNIPLLLENVAAAK-FVGADPYFVLDVARQASTSYPAAICLDT 173 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H AAG+D+ E +K F + A +R +HLND K+ GS D H +LGEG+IG Sbjct: 174 AHLAAAGFDILQILE-DKRFEELAL-----RIRVVHLNDLKTPIGSSRDVHENLGEGSIG 227 Query: 241 HDAFRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTE 281 + + +++ +G +ILET PD + +A LK E Sbjct: 228 YGPLKKMVRAQN-NGTSIILETPQDKPDNNRKNVAVLKKMLVE 269 >UniRef50_B6K4V1 DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4V1_SCHJY Length = 320 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 122/222 (54%), Gaps = 22/222 (9%) Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGL-------------SLLNFHPGSHLMQISEEDCL 123 E+ +K+ ++ + LG ++LN +PGS+ + L Sbjct: 51 ADKEEESTQKTV------LEMSKFLGAHISAAGGVFNAVTNMLNINPGSYA-SCEKSQAL 103 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +A+ IN A + T+ VT V EN AGQG LG F+ A + ++D SR VC+DTCH Sbjct: 104 KNLADCINRAHEATENVTIVTENMAGQGQCLGGVFDDFAELKSLIKDTSRWRVCLDTCHT 163 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 FAAG+D+RT E+ +F VG +++ G HLND+K+ GS D H +G G +G + Sbjct: 164 FAAGFDIRTQETYEQVIQEFDEKVGVEFVGGWHLNDSKAPLGSNRDLHEHIGLGFLGLEP 223 Query: 244 FRWIMQDDRFDGIPLILETI--NPDIWAEEIAWLKAQQTEKA 283 FR I+ D R+DGIPL+LET P++WA+EI L A +KA Sbjct: 224 FRLIVNDPRWDGIPLVLETPAEKPEMWAKEIELLTAMIGKKA 265 >UniRef50_Q8KTG2 Putative endonuclease IV (Fragment) n=1 Tax=Tomato big bud phytoplasma RepID=Q8KTG2_TOBBP Length = 208 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 5/204 (2%) Query: 27 TAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEK 86 F L++ + + + I + + ++ ++ H Y+INL +P E E Sbjct: 5 NTFMLYSGPPQSTQRNIIEKDDIHKTLLKMKNHNININFLVGHAPYIINLANPSLEKREF 64 Query: 87 SRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQG--VTAVI 144 S + E+ R Q+ + + HPG++L + ++ + + IA+ IN T + Sbjct: 65 SINFLTQELNRFSQMKIPQMVLHPGNNLHK-NKSEAIYWIAQGINKIFSNTPNLKTKIAL 123 Query: 145 ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFA 204 E AG+G+ +G FE L IID +EDK+R+ +C DTCH F AGYD++ E T F Sbjct: 124 ETMAGKGNEIGANFEELKNIIDLIEDKTRISICFDTCHVFDAGYDIKNQ--FENTIKKFD 181 Query: 205 RTVGFKYLRGMHLNDAKSTFGSRV 228 + + KYL +H+ND+K+ GS+ Sbjct: 182 KIINLKYLSVIHINDSKNCLGSKK 205 >UniRef50_A1SQS6 Endonuclease IV n=3 Tax=Propionibacterineae RepID=A1SQS6_NOCSJ Length = 269 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 105/276 (38%), Gaps = 24/276 (8%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IGAHV A +A A RA E+ F + + ++ E A + Sbjct: 9 IGAHVDQADPIAEA--RAREMP--HVQFFLGDPQGYQGPEFRYAGGAEALKADAEA--AG 62 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 + H Y++N+ SR + +G L H G E Sbjct: 63 VGLYVHAPYIVNVATTNNRIRIPSRKLLQQHVDAAASIGARGLIVHGGHVNKDDDPEKGF 122 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR---VGVCIDT 180 ++I + +IENTAG + + E + + D + + VG C+DT Sbjct: 123 DNWRKAIEAV---DLKLPLLIENTAGGDNAMTRYLERIGRVWDAISSAEQADLVGFCLDT 179 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 CHA A G L T + + + +H ND++ F S DRH SLG G + Sbjct: 180 CHAHAGGNSLETVVDDVRRI--------TGRIDLVHCNDSRDAFDSGADRHASLGAGQVD 231 Query: 241 HDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWL 275 D +++D G P++LET P + AWL Sbjct: 232 PDLLAAVVRD---AGAPVVLETPGGPAEHRADAAWL 264 >UniRef50_D2XAT9 AP endonuclease family 2 protein n=1 Tax=Marseillevirus RepID=D2XAT9_9VIRU Length = 299 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 42/305 (13%) Query: 4 IGAHV--SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G+H+ S+ G+ + ++ + L+ N + + + + + F+ Sbjct: 5 VGSHIPFSSKFGVCKSIESI-DLPLDCYQLYISNPKAFSSTEYNEKDLLSFRE------- 56 Query: 62 TSAQILPHDSYLINLGHPVT--------EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 + ++ H S + NL LE +R ++ C +G L H G+ Sbjct: 57 SGKKLFVHASLIYNLCGSKEGEGCPKYQRNLEFTRKGLSYDLDVCALMGAKGLVVHVGAA 116 Query: 114 LMQISEEDCLARIAESINIALDKTQGVT----------------AVIENTAGQGSNLGFK 157 E ++AE+++ L++ +T ++EN AG+G+ LG Sbjct: 117 ---KDREWGCRKVAETVDFVLNQKSKLTDRYSEILGRDIRKERVLILENCAGEGTKLGRD 173 Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAG-YDLRTPAECEKTFADFARTVGFKYLRGMH 216 L I +++K + CIDTCH FA+G D T +K + D+ + L H Sbjct: 174 IPELFTIWSLIQNKEQTRFCIDTCHGFASGTMDFGTTKGIKKFWKDWDENFPRESLCLFH 233 Query: 217 LNDAKSTFGSRVDRHHSLGEGNIGHDAFR---WIMQDDRFDGIPLILETINPDIWAEEIA 273 LND+K G +VDRH +L G I D + + ++ + IPL+LE D +E+ Sbjct: 234 LNDSKGVLGCKVDRHETLLCGRIWEDKAQVLSYFLEGAKEREIPLVLE-RKDDTVEKELE 292 Query: 274 WLKAQ 278 + Sbjct: 293 ICRTL 297 >UniRef50_B8DYW4 Apurinic endonuclease Apn1 n=2 Tax=Dictyoglomus RepID=B8DYW4_DICTD Length = 287 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 18/268 (6%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +G H+ G + + LF+ + R +R + Sbjct: 23 KLGVHLFRGG--RSILEDIKLLRINTAQLFSGSPRSYRPTNEKLPV------------FP 68 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H Y++N+ P + S I+E++ E+L L HPGS ++ +E Sbjct: 69 FNSVFIHAPYVVNIASPDEKVFNLSIKKVIEELKLAEELEWEGLIIHPGS-SKKMGKEVA 127 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 +++ L++ ++EN+AG+G G E +I + + CIDTCH Sbjct: 128 KRNFFKALEKILEEDIKAKLIVENSAGEGDGWGSTLEDFYSIHEEFPS---IYFCIDTCH 184 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 FAAGY+L+ P C++TF F + + L +H+ND+ GS D+H +G+G IG Sbjct: 185 LFAAGYNLKNPRVCKETFYSFFERIPVEKLVLIHINDSHFPLGSHRDQHAHIGKGAIGIG 244 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAE 270 F+ ++ IPLILET A+ Sbjct: 245 GFKNLLSIPEIRKIPLILETPKDSPMAD 272 >UniRef50_D2S816 Xylose isomerase domain protein TIM barrel n=2 Tax=Frankineae RepID=D2S816_9ACTO Length = 270 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 113/284 (39%), Gaps = 34/284 (11%) Query: 4 IGAHVSA---------AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKA 54 IG HV AGG RAAE+DA LF + + W+A D Sbjct: 6 IGVHVGPGLTEDNELDAGGP---LARAAEMDADGVQLFLADPQGWKAPEPRPDAADLLA- 61 Query: 55 ACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 ++ H Y++N+ SR + +G + H G L Sbjct: 62 -------GDVTVVVHAPYVLNVATTNNRIRIPSRKLLAAHAKAAAAVGAVGMVVHGGHVL 114 Query: 115 MQISEEDCLARIAESI-NIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + + ++ A D + +IENTAG G+ + + LA + D V + Sbjct: 115 AKDDPAAGVDNWRKTFARQAEDGGFPLPLLIENTAGGGNAMARDLDALARLWDAVGEFG- 173 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 G +DTCHA+AAG+DL T + + + +HLN+++ GS DRH Sbjct: 174 AGFVLDTCHAWAAGWDLATAVDDVRAI--------TGRVDLVHLNNSRDPQGSSRDRHAP 225 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINP-DIWAEEIAWLK 276 L +G I +++ R P++LET AEEI L+ Sbjct: 226 LADGEI---PTELLVEVARSADCPVVLETPGDAASHAEEITLLR 266 >UniRef50_C1GRM8 DNA-(Apurinic or apyrimidinic site) lyase n=2 Tax=Paracoccidioides brasiliensis RepID=C1GRM8_PARBA Length = 485 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 108 FHPG-SHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIID 166 H G +Q + E L+R+++++ ALD T V V+E G G+ +G +++ Sbjct: 173 VHIGPGATIQTTLESSLSRLSKALTSALDATTRVILVLETMCGHGTTIGGSLSDFKSLLS 232 Query: 167 GVED--KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF 224 + D +R+G+C+DTCH+FAAGYDLR+P K +F +G K+LR +HLND+K+ Sbjct: 233 LIPDTYHARIGICVDTCHSFAAGYDLRSPGAWNKFMKEFDEEIGLKFLRALHLNDSKTPL 292 Query: 225 GSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 GSR D H ++G G +G AF +M + R +GIP+ILET E Q ++ Sbjct: 293 GSRRDLHANIGTGFLGLRAFHNVMNEKRLEGIPMILETPIDRPANIEAETASGQPDDE 350 >UniRef50_C3Z7U8 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Z7U8_BRAFL Length = 326 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 74/140 (52%), Positives = 98/140 (70%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 K++GAHVS GG+ NA A I+A AF LF ++QRQW P+ F+ ACEK+ + Sbjct: 186 KFVGAHVSITGGIENAVENAVAINARAFGLFLRSQRQWACKPMEESAARLFREACEKHGF 245 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + QILPH SYL+N G P E L KSR+A +DE++RCEQLGL++ NFHPGS +I+ E+ Sbjct: 246 SPDQILPHGSYLLNCGAPNPETLRKSREALVDELKRCEQLGLTMYNFHPGSSCGEITVEE 305 Query: 122 CLARIAESINIALDKTQGVT 141 CL RIA+SIN+A +T GVT Sbjct: 306 CLTRIADSINLAHQQTSGVT 325 >UniRef50_A8ABG7 Endonuclease IV n=2 Tax=Archaea RepID=A8ABG7_IGNH4 Length = 283 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 103/287 (35%), Gaps = 29/287 (10%) Query: 5 GAHVSAAGG-LANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 G SA + R E+ A L F + R ++ + E + Sbjct: 14 GIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVR------MSEEKAREAGKVARELDV- 66 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H Y +NL P E ++S + + + G + FHPG ++ + Sbjct: 67 --VLTAHAPYYVNLASPEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKA-PSVV 123 Query: 123 LARIAESINIALDKTQ----GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 RI +++ +++ + V E L KF L +I ++ V C+ Sbjct: 124 YKRIRDALAEVVERVKELGLDVWIRPETM-----ELKSKFGSLDEVIKLSQEFDIVLPCV 178 Query: 179 DTCHA-FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 D H + G+ + E + +G L MH++ + H +L E Sbjct: 179 DFAHLRYREGW--NSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHG-THLNLEES 235 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAV 284 ++ ++++ G+ LI E+ N + E+ +K + ++ Sbjct: 236 DMRWKELLEVLKEFNVKGV-LISESPNLE---EDAVMMKKYWYQLSI 278 >UniRef50_Q58707 Uncharacterized protein MJ1311 n=11 Tax=Methanococcales RepID=Y1311_METJA Length = 293 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 101/278 (36%), Gaps = 28/278 (10%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 V L ++ + AE + A+ + + L+ + I ++Y I+ Sbjct: 25 VFLPESLTSSMEKIAEHNFDAWEIVCEGTH-----YLSPKNIKYLMELRDRYEVE---IV 76 Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL--MQISEEDCLA 124 H + +N + + + D ++ +L ++ HPG + L Sbjct: 77 VHAPFSDLNPASMNERVRKLTVECIRDAIEGAFELDSEVVVVHPGYIPELWSNYVSEILD 136 Query: 125 RIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 +++ ++ + G+ +EN LG E L I+ ++ K +G+ D H Sbjct: 137 NNFSTLSEIVEIAEDYGIKIGLENMPNFRGVLGITPESLLEIVKDIDSK-NLGITFDIGH 195 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A AG PAE + + +G + +H +D D H +GEGNI Sbjct: 196 ANTAG----NPAEFVEKLQNIG--IG---IIHVHAHDNNG----YDDEHLKIGEGNINFI 242 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 +++ +DG+ I E N + LK Sbjct: 243 EVLEKLKEIGYDGVISI-ENKNIRDAVKSKEILKEYLE 279 >UniRef50_A4XLN2 Endonuclease IV n=2 Tax=Clostridia RepID=A4XLN2_CALS8 Length = 286 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 107/277 (38%), Gaps = 22/277 (7%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 I +A+ + + ++ + + +KY + H Sbjct: 19 KSSVEVPRWLYSIGLSAYEY-----QCNKGVNISKEKARQIGDEAKKYDI---LVSIHAP 70 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH---LMQISEEDCLARIAE 128 Y IN G E L+KS++ + ++ +++ + FHPGS +I+ E I E Sbjct: 71 YYINFGSQEEEKLQKSKEYIYECVEVAKEMRAERIVFHPGSCAKVDRKIAFETAKKAILE 130 Query: 129 SINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AG 187 +N+ + + T G+ +NLG + II+ + + ID H A G Sbjct: 131 VVNVVREMKVEGIFLCPETMGKKNNLGS----VDEIIEICKIDEFLLPTIDFGHINAFTG 186 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNI--GHDAF 244 L+T + F +G++ +R H + ++ + S+ + +H + + + Sbjct: 187 GGLKTKEDFVNLLKKFIEQLGYERMRRFHSHFSRIEYTSQGEKKHWNYEDKQYEPDFEPL 246 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 + + + + + +I E+ D +E+ LK E Sbjct: 247 AEALVELKLEPV-IICESK--DYMSEDALVLKKIYYE 280 >UniRef50_B0K0T0 Xylose isomerase domain protein TIM barrel n=13 Tax=Clostridia RepID=B0K0T0_THEPX Length = 292 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 24/276 (8%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 + A+ R ++ + E K +K++ T I H Sbjct: 23 KSSLEMPEWLHNMGLDAYEYS-----FSRGIKISEKMAKELKEGAQKFNIT---ITVHAP 74 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN 131 Y INL +E S+ ID + + +G + FHPGS + + ++ L R + + Sbjct: 75 YYINLATTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGA-EGTRKEALERAKKLLK 133 Query: 132 IALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA- 186 L + + + T G+ + LG L +++ R+ ID H A Sbjct: 134 EILKEIEDKGLTDITLCPETMGKKNQLGT----LEEVLELCNVDKRIIPTIDFAHLHARD 189 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIG--HDA 243 ++ + + R +G + + +H++ ++ + + + RH +L + G + Sbjct: 190 NGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKDTQYGPEFEP 249 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + + + + I +I E+ AE+ LK Sbjct: 250 LAQLFYERKMEPI-VICESRG--TMAEDALKLKEIY 282 >UniRef50_D2RI59 Xylose isomerase domain protein TIM barrel n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RI59_ARCPR Length = 268 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 28/276 (10%) Query: 9 SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP 68 S GG E+ A + + R + + K E + ++ Sbjct: 16 STIGG----IRTIRELGLDAMEV-----QFVRGVKMGIDMAKQVKEVAESLNV---KLSV 63 Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H Y IN+ + L+ S + ++ + FHPG +L + S+E RI + Sbjct: 64 HAPYYINM-NADGVKLKGSIERLKKTVEIGGIF-AKDIVFHPGYYL-KHSKETTYRRIRD 120 Query: 129 SINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 ++ ++ + +GV E T G+ + G E + +E + CID H A Sbjct: 121 NLKPVVEFARDRGVMLRPETT-GKPTQFG-DLEETLRLCQELE----ILPCIDFAHIHAR 174 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHDAFR 245 + E + T+G L+ +H++ + +G + + RH +L E + ++ Sbjct: 175 YRAFNSYEEFCQILETVENTLGSDALKMLHVHVSGIEYGLKGEKRHLNLKESDFKYEDLL 234 Query: 246 WIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 ++D DG +I+E+ N + E+ LK E Sbjct: 235 RALKDFSVDG-TIIVESPNLE---EDALMLKKLWLE 266 >UniRef50_A8PDB3 DNA-(Apurinic or apyrimidinic site) lyase, putative n=1 Tax=Brugia malayi RepID=A8PDB3_BRUMA Length = 371 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 1/127 (0%) Query: 158 FEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHL 217 FE L II+ V++K RVGVC DTCH FAAGYD+R+ ++TF++F T+G +YLR H+ Sbjct: 232 FEELQQIINLVKNKKRVGVCFDTCHIFAAGYDIRSEDRYKETFSEFENTIGLQYLRAFHI 291 Query: 218 NDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 ND+ GS++DRH ++G+G + AFR ++ D RFDG+P+ILET +AEE+ L Sbjct: 292 NDSMGDLGSKLDRHANIGKGKLKLAAFRNLIADQRFDGLPMILETP-EGDYAEEMIRLYH 350 Query: 278 QQTEKAV 284 K + Sbjct: 351 SLNSKPL 357 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 32/192 (16%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACE---- 57 K +GAHVS AGGL + A I +FA F +NQR W + P+ + + F+ + Sbjct: 176 KMLGAHVSVAGGLEQSFYNALSIGCRSFAFFVRNQRSWNSPPIKAEVVQAFRETAQFEEL 235 Query: 58 ---------KYHYTSAQILPH---DSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSL 105 K H Y I + +++ F + + + L Sbjct: 236 QQIINLVKNKKRVGVCFDTCHIFAAGYDI----RSEDRYKETFSEFENTIGL-QYLRAFH 290 Query: 106 LNFHPGSHLMQISEEDCL---ARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEH 160 +N G ++ + + + G+ ++E G E Sbjct: 291 INDSMGDLGSKLDRHANIGKGKLKLAAFRNLIADQRFDGLPMILETPEGD------YAEE 344 Query: 161 LAAIIDGVEDKS 172 + + + K Sbjct: 345 MIRLYHSLNSKP 356 >UniRef50_A1RYK4 Endonuclease IV n=10 Tax=Archaea RepID=A1RYK4_THEPD Length = 291 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 98/275 (35%), Gaps = 22/275 (8%) Query: 10 AAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPH 69 + GG+ + + A + R L ++ E K + + H Sbjct: 19 SKGGVKEGMLEVKRLGLDAMEI-----EFVRKIFLDDKSAQEVKKLRHELEI---VLTVH 70 Query: 70 DSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAES 129 Y +NL ++ S + + + + G + FH G + E ARI Sbjct: 71 APYYVNLNSADESKVKASAERVLRSAEVGFKAGAWSVCFHAGYY-GDSEPESAYARIKSE 129 Query: 130 INIALD--KTQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 + + +GV + G+ S G L +I E+ V ID H A Sbjct: 130 VAAIARQLRDEGVEIWLRPEVLGKPSEFGS----LEEVIRLSEEVENVLPTIDFAHLHAR 185 Query: 187 GYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHDAF 244 G LR + +G L MH++ + +G + + RH +L E ++ + Sbjct: 186 GKGALRQYQDFAAVLDALESRLGRIALDNMHIHVSGIEYGEKGEIRHLNLTEADLDYKLL 245 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 +++D G+ +I E+ N + ++ LK Sbjct: 246 VKVLRDYNVKGV-VISESPNLE---QDALLLKELY 276 >UniRef50_Q6A5M4 Probable endonuclease IV n=1 Tax=Propionibacterium acnes RepID=Q6A5M4_PROAC Length = 251 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 20/235 (8%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 IG HV A +A AA R A+I + + + W+ A E Sbjct: 6 IGGHVDTADAVAQAAARGADIA----QISLGDPKSWKKPVCDFPGGSL--ALREAAGEAG 59 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 ++ H +++IN+ SR + ++G + H G E Sbjct: 60 LTLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGGHVRAGEPIEKGQ 119 Query: 124 ARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE---DKSRVGVCIDT 180 ++I+ V +ENTAG + + E L+ + + VG C+DT Sbjct: 120 DNWRKAIDGL---EMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDT 176 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 CHAFAAG D+ + + + + +H ND++ GS DRH +LG Sbjct: 177 CHAFAAGLDMASLVDDVRGI--------TGRINLVHANDSQGAVGSGRDRHANLG 223 >UniRef50_C5A4T0 Deoxyribonuclease IV (BER) (Nfo) n=2 Tax=Thermococcus RepID=C5A4T0_THEGJ Length = 257 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 92/283 (32%), Gaps = 42/283 (14%) Query: 4 IG-AHVSAAGGLANAAIR----AAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 IG + S G R A + L ++ + +K + Sbjct: 2 IGLSMTSYKGRTPEEFERWLEEAEGLGFDFVELVSEWPNFLTR--------ETWKTYADV 53 Query: 59 YHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLM 115 ++ H + +N+G + + S + + + +L + HPG S Sbjct: 54 LGSFELKVTVHAPFSDVNIGSLNEKLRKASLEVLAETLDVASRLNALAVTVHPGHCSPAS 113 Query: 116 QISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 + ED +S+ G+ +EN E LA ++DG+ Sbjct: 114 RKFREDYNRVHRDSLRELERFSGEFGIRVGVENMPAFLILDAQTPERLAELLDGI----N 169 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 +GV +D H G+ F F +G + +HL+D + D H Sbjct: 170 LGVTLDLGHLNTVGFP----------FERFMELLG-DRIVHVHLHDNSG----KSDEHLP 214 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 LG+G + + G+ LE D +A+L+ Sbjct: 215 LGKGTVPWREVL-----PQLGGLTWALEVSGLDDARVSLAFLR 252 >UniRef50_A2BLM2 Predicted Endonuclease IV n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLM2_HYPBU Length = 283 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 111/278 (39%), Gaps = 19/278 (6%) Query: 11 AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHD 70 +G A A + A + A + + +A E + H Sbjct: 18 SGDYVKAIEVIAGMGLDAIE--------YEAVRGVRISEAKARAIAEAAERYGVIVSMHA 69 Query: 71 SYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 Y IN P + +EKSR+ I ++ + + FHPG + S E+ L R E++ Sbjct: 70 PYFINFASPDKQTVEKSRERLIASVRAASWMNAYAVVFHPGYYKGNSSPEEALQRTIENL 129 Query: 131 NIALDKTQ-----GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 + + GV E T G+ + +G E + AI + +R V HA + Sbjct: 130 RSVDEYIEQQGIKGVWIAPETT-GRTAQVGS-VEEVVAICRELRH-ARPAVDWAHIHARS 186 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHDAF 244 G + + + + R +G ++ +H + +K +G + HH+L EG G D + Sbjct: 187 LGKHVVSVDDVVRIVEYIERELGTWAVKPLHTHFSKIGYGEGGEKEHHTLAEGEYGPD-W 245 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 R + + + GI ++ + +P I ++ +K ++ Sbjct: 246 RIVCRAYKNLGIEAVVISESP-ILEQDALVMKKICEDE 282 >UniRef50_A8V616 Deoxyribonuclease IV (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V616_9AQUI Length = 156 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 139 GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEK 198 T ++E AGQ +G + + A+I E +GVC+DTCH ++AGY + + Sbjct: 6 NTTFLVETLAGQKGEIGKTTQEIKALIQPFES-ENIGVCLDTCHIYSAGYKINKEKGFQD 64 Query: 199 TFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPL 258 +F +G ++ +H ND+K+ F SR DRH +G+G+IG F + + D+ F +P Sbjct: 65 YKDEFDTLIGLDKIKVIHCNDSKTPFNSRKDRHEHIGKGSIGLKGFEFFLNDEYFCRLPF 124 Query: 259 ILETINPDIWAEEIAWLKAQQT 280 ILET +I ++ ++ Sbjct: 125 ILETPKQGNM--DIVNMEKLRS 144 >UniRef50_O27091 Endonuclease IV n=2 Tax=Methanobacteriales RepID=O27091_METTH Length = 279 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 98/285 (34%), Gaps = 24/285 (8%) Query: 5 GAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSA 64 G V G N + + A+ + L + K Sbjct: 12 GNPVGYRGSTVNVFSKIRAMGLDAYEY-----QATYGLRLKKENAIRIGENSRKNDI--- 63 Query: 65 QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLA 124 + H Y INL E +EKS + D E +G + FHPG + + L Sbjct: 64 LVSMHGPYYINLSSARKETVEKSIERLFDCAVAAELMGAYRIVFHPGFY-GEHGRSGALG 122 Query: 125 RIAESINIALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 ++++ +++ G + T G+ S +G L II E+ V ID Sbjct: 123 LCIKALDELIERLHGAGIREFTLAPETTGKRSQVGS----LDEIIKLSEEFDEVMPTIDF 178 Query: 181 CHAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGN 238 H A G +R + +G +L H + + +R HHSL EG Sbjct: 179 AHIHARGGGCIRDASSYRGILERIESRLGSHHL---HCHFTGIEYTDAGERKHHSLSEGY 235 Query: 239 -IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 + ++ D +D +I ET D A +I + + E+ Sbjct: 236 GPPIEPLIEVLVDGGWDA-TIISETPMKDTDARKIKGIIKEYLER 279 >UniRef50_Q12UI4 TIM alpha/beta barrel protein n=7 Tax=cellular organisms RepID=Q12UI4_METBU Length = 298 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 101/271 (37%), Gaps = 20/271 (7%) Query: 5 GAHVSAAG-GLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 GA +S+ G + R A++ L F + R + +T + E+ + Sbjct: 33 GAPLSSKKKGSIDGIRRIAQLGLGCMELEFVRGVR------MKEETAANVRQTAEEENV- 85 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE-- 120 + H Y INL E + S + + G S + FHP + S++ Sbjct: 86 --ALSVHAPYYINLNSAEEEKITASVQRIYESARIGALCGASSIVFHPAYYQGHSSKKVM 143 Query: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + + + E + L + T G+ + G E + +E V CID Sbjct: 144 EKVTGLLEGLTSGLSDEGIDVVLRPETTGKATQFGS-LEETLMMATAIEG---VMPCIDF 199 Query: 181 CHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGN 238 H A + + T E +G + L MH + + +G++ ++ H L E + Sbjct: 200 SHLHARSCGEYNTIEEFRSVLESVESALGREGLENMHCHISGIAYGNKGEKNHLILQESD 259 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWA 269 + + + ++ G+ +I E+ N + A Sbjct: 260 LNYTDLMAVFREFDVKGL-VICESPNLEDDA 289 >UniRef50_B0MRK4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRK4_9FIRM Length = 281 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 104/272 (38%), Gaps = 23/272 (8%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI 74 A + + + R + T ++ A + T + H Y I Sbjct: 21 DELPSYLASMGLDCYEIECG-----RGVRIAAATYEKLPALASGNNIT---VTLHAPYFI 72 Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL 134 +L E + S + + ++ ++LG + + H GS +I+ + L +++ A+ Sbjct: 73 SLSSVEAEKRDNSVNYIAESLRAADKLGAAKVVVHSGSCA-KITRAEALYLAKQTLAKAV 131 Query: 135 D--KTQGVT-AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY-DL 190 +++G+ + T G+ + LG L +++ + C+D H A + ++ Sbjct: 132 ALRQSEGLKAIICPETMGKINQLGT----LDEVLELCTLDDEMLPCVDFGHLNARTHGEI 187 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF-GSRVDRHHSLGEGNIG--HDAFRWI 247 +T + T+G L MH++ +K + S RH + + G ++ + Sbjct: 188 KTIDDYSAMLDKIENTLGHDRLSQMHIHFSKIEYTNSGERRHLTFADEIYGPQYEPLCEL 247 Query: 248 MQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 + R +I E+ AE+ + +K Sbjct: 248 L-AKRNLNCTVICESDGTQ--AEDASLMKKAY 276 >UniRef50_A3DNS0 Endonuclease IV n=2 Tax=Desulfurococcaceae RepID=A3DNS0_STAMF Length = 282 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 98/272 (36%), Gaps = 25/272 (9%) Query: 14 LANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 + A EI A + R R E+ + H Y Sbjct: 20 IEVAPRFLKEIGLNAMEYEAVRGVRITREKAY---------KLGEEARKNDILLSIHAPY 70 Query: 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINI 132 INL + +E S I ++ + ++ FH G + + + + L ++ S+ Sbjct: 71 FINLASSKNKVIEASISRLIKSIEAASWMNAYIVVFHLGYY-GEYNRNEALRKVINSLKQ 129 Query: 133 ALDKTQGV----TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA--A 186 ++ + + TAG+ S +G L II+ V ID H A Sbjct: 130 VIEYRNTMGYKRIILGPETAGKKSQIGG----LEEIINISSLLDNVRPVIDWAHLHARSN 185 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIG--HDA 243 G + + + + +G + + +H + +K + S+ + RHHSL E G + Sbjct: 186 GKLINSIDNVIEVIEIIEKNLGGEAVNPLHSHFSKIEYSSKGEIRHHSLKEKEYGPCFET 245 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 + + + + +I E+ +I A E+ + Sbjct: 246 VCKGLCETGINSV-VISESPLLEIDALEMKKI 276 >UniRef50_B6YWM5 Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWM5_THEON Length = 250 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 38/275 (13%) Query: 9 SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP 68 S A + ++ L ++ LT + +F E Y +I Sbjct: 8 SIKD-FEEWAGKTQKLGFDFIELLSEWPH-----YLTKASYRDFAEIVEGYRM---KITV 58 Query: 69 HDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLAR 125 H + IN+G + + + + ++ ++ ++ HPG S L +E L Sbjct: 59 HAPFSDINIGAFNEKIRRAALEVLRETIEVAAEMNALVVTIHPGHRSPLSIKHQEKYLEI 118 Query: 126 IAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 +S+ + G+ +EN E LA ++ ++ +GV +D H Sbjct: 119 HRKSLRKIAAWSEEFGIKVGLENMPSFPILDAQSCERLAELVGDID----IGVTLDVGHL 174 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 T ++ + +HL+D + D H LGEG + Sbjct: 175 NT------TTRNFDRFIQLLE-----NRIVHLHLHDNRGD----KDEHLPLGEGTVPWAQ 219 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 + + LE + + + +L++ Sbjct: 220 VI-----PKLPKVTWSLEVGGIESARKSLEFLRSL 249 >UniRef50_A6P1L7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1L7_9BACE Length = 282 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 23/279 (8%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 +A +E+ A+ + + + +T + AA + H Sbjct: 17 KSSVDAPRWLSELGLDAYEY-----QCGKGVNVGEETARKLGAAAAANSV---ALSLHAP 68 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN 131 Y INL +P E+L+K+ I + + +G + + H G LM+ + + S+ Sbjct: 69 YFINLANPDPESLKKTTGYIIAACRAADWMGATRVVIHSG-ALMKRTRREAQDIALNSLK 127 Query: 132 IALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-A 186 + G + T G+ + LG L +++ R+ CID H +A Sbjct: 128 EIVAAVDGEGFGHITLCPETMGKINQLG----DLDEVLELCTLDERLTPCIDFGHLYART 183 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF--GSRVDRHHSLGEGNIGHDAF 244 +L C + +G + H + +K F G H + + G D Sbjct: 184 LGELEGHEACVRMLDRVVEVLGEERASRFHSHFSKIQFTLGGGEKMHLTFDQDEFGPDPA 243 Query: 245 RWIMQ-DDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 + + R I E+ AE+ +K Sbjct: 244 PLMAEIARRNWNPTFICESAGTQ--AEDAVTMKKLYQAA 280 >UniRef50_Q0W8Q0 Predicted endonuclease/nucleotidyltransferase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8Q0_UNCMA Length = 601 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 90/285 (31%), Gaps = 34/285 (11%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 MK +H + + T LF L QT++ + Sbjct: 1 MKLSFSHKLQSESDVRSIQSMEGHGFTCVELF-----FPERESLDEQTLNMIDEVSATTN 55 Query: 61 YTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH-LMQIS 118 + H Y +N+ E S D + + + ++ H G S Sbjct: 56 LY---LTAHLPYKNLNIASIYQYVRESSTDLLVSIIDDLSDY-IDIVTLHTGYAQFGSGS 111 Query: 119 EEDCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + + S+ D+ + +EN + +G F + AI+ GV D+ +G+ Sbjct: 112 LDRAIENNILSLAKICDRAGQNDIMVGVENAMNERHMVGKTFREMEAILKGV-DRGNLGI 170 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 D HA G + +Y+ +H +D D H +GE Sbjct: 171 TFDVGHAQLTG----NIEDYLSR---------KEYILEVHAHDNFG----YTDEHLPIGE 213 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G + + + PL+LE + + +L++ E Sbjct: 214 GKVNWNRVYETVNA---WDCPLVLEQRTFEEGLRSVKYLQSLSAE 255 >UniRef50_B8DYJ2 Xylose isomerase domain protein TIM barrel n=2 Tax=Dictyoglomus RepID=B8DYJ2_DICTD Length = 264 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 34/274 (12%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 + A ++ LF +R + + K K + H Y Sbjct: 14 SVKRAISITKKLGGNTLELFGDLVLFYRGKFC--EKPESIKEFAVKNDI---FLTMHLPY 68 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL--ARIAES 129 + INL E EKS ++ + ++ E+ G+ HPG + L R+ ++ Sbjct: 69 IDINLASFNDEIWEKSIESILKAIEYGEKAGIKRAVLHPGGVPLSHLVLIFLAQRRLRKA 128 Query: 130 INIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 + L+ + V IEN + +++ + I G K + VC D HA + Sbjct: 129 LEFILEKAEKYDVEVCIENPYFEENDIFSNVDQFYKFIKGFGGK--LKVCFDFGHAHISK 186 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 + D++ + ++ +H++D D H SLG+G+I + Sbjct: 187 KGI-----------DYSLNLLKPFITHVHIHDNHGE----KDEHLSLGKGSIDFKKYLDF 231 Query: 248 MQDDRFDGIPLILETI----NPDIWAEEIAWLKA 277 ++ FDG +ILE + + +K Sbjct: 232 LR--NFDG-TIILEINSLKDKREDLKRSVEIIKG 262 >UniRef50_D1J987 Putative uncharacterized protein n=2 Tax=environmental samples RepID=D1J987_9ARCH Length = 263 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 93/251 (37%), Gaps = 23/251 (9%) Query: 37 RQWRAAPLTTQTID-EFKAACEKYHYTSAQIL-PHDS-YLINLGHPVTEALEKSRDAFID 93 + W Q ++ +FK + T+ I H IN+ E+S + Sbjct: 29 QGWEIVGEGLQKVEGKFKERVRELSETTNLIFSLHSPLSDINIASVNERMREESIRQIKE 88 Query: 94 EMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIALD--KTQGVTAVIENTAG 149 + + + HPG S L E + S+ D +G+ +EN Sbjct: 89 CIDAAYEFIADICVVHPGFFSPLTVQMPEKAFQKAIASLTTICDFAAERGLRIALENLTS 148 Query: 150 QGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGF 209 +G E L I+ GV + +G+C+D HA T ++ A V Sbjct: 149 AKMLMGRDPEELNRIVRGV-NADNLGLCLDVAHA-------NTTKTLDEFLNKKATAVE- 199 Query: 210 KYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWA 269 + MH++D D H LGEGN+ + ++D + G+ ++LE + Sbjct: 200 --IIHMHVSDNFGA----DDLHLPLGEGNLDYKKVLAWIKDYEYRGV-MVLELYTLEGGI 252 Query: 270 EEIAWLKAQQT 280 E +A ++ T Sbjct: 253 ESLALIQKLLT 263 >UniRef50_B9M9L1 Xylose isomerase domain protein TIM barrel n=5 Tax=Bacteria RepID=B9M9L1_GEOSF Length = 259 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 102/287 (35%), Gaps = 32/287 (11%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 M IGA + + + AE+ L + +D + ++ Sbjct: 1 MMRIGAMNHPQHRVEDEILWMAEMGLDFIDLTLEPPAAGHW----QVDVDSMRELLQETG 56 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 ++ H +Y + LGHP E E + +AF +Q +LG +N HP Sbjct: 57 LG---VIGHTAYYLPLGHPFEEVREGAVEAFSSTLQILARLGACCMNIHPDFKAPMHDAA 113 Query: 121 DCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + + +SI L + + +IEN G + L ++ + + +G+ + Sbjct: 114 FSVEQNLKSIRELLPLARRLDMELMIENLPGNVN----DVPQLGHFLEAIPE---LGLHL 166 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 D H T + E +R +HL+D + D H LG G Sbjct: 167 DIGHTNLQVRHNTTSSIMEHY---------GHRVRHVHLHDNRG----TDDLHLPLGAGT 213 Query: 239 IGHDAFRWIMQDDRFDGIPLILE--TINPDIWAEEIAWLKAQQTEKA 283 + ++ ++ +DG + LE T + ++ L+ E A Sbjct: 214 LDLESCIRSLKAAGYDG-TITLEVFTPDRELLRFSADKLRRVWNEVA 259 >UniRef50_A8TE27 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8TE27_METVO Length = 289 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 19/280 (6%) Query: 8 VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQIL 67 V + ++ + ++ + ++ + + A I K K + + Sbjct: 21 VYIHDDIVSSLEKISKYNFDSWEIVFEGTH--AEADCKMDNILNLKHCEMKKCQKGLETV 78 Query: 68 PHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HLMQISEEDCLA 124 H + +N + + + D+ I+ + + ++ HPG +L + +E + Sbjct: 79 VHAPFTDLNPASLNDKVSKVTVDSIIEAIDFASKTNSKIVTVHPGYIPYLWKDYKERVIE 138 Query: 125 RIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 R + SI ++ +T +T +EN LG E L + G++ S +G+ D H Sbjct: 139 RNSNSIKKLVEVAETYDITIGLENMPNFFGVLGTTPEELELLTKGIDSNS-LGITFDIGH 197 Query: 183 AFAA-GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGH 241 A + + + + H++D D H L EGNI Sbjct: 198 ANTCKELSNLNTEDYIAELNNIGKG-----IVHTHIHDNDG----TDDSHLKLKEGNINL 248 Query: 242 DAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 +A + D ++GI LE + D E + + Sbjct: 249 EAVFTNLNDINYNGI-YSLECRSIDDAVESRRIISEILKD 287 >UniRef50_A4J1S8 Endonuclease IV n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1S8_DESRM Length = 284 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 96/279 (34%), Gaps = 25/279 (8%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 A+ A+ + R + E ++ + H Sbjct: 20 KSSLQMPEWLAQRGLDAYEY-----QCSRGVKIKEPMARELGEKARQFGV---ALSIHAP 71 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR----IA 127 Y INL ++ K++ +D ++ + + FHPG + + R Sbjct: 72 YYINLSTEESDKKIKTKGYILDSLRVARWMEAKTVVFHPGGGPG-TNRGETFNRSKILFR 130 Query: 128 ESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-A 186 E + + + T G+ + +G L +++ +V CID H A + Sbjct: 131 EILQEIAAEGLQDILLAPETMGKINQMGS----LEEVLELCSLGEQVVPCIDFGHLNAVS 186 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFG-SRVDRHHSLGEGNI---GHD 242 L+T + K +G + ++ +H++ + F + +H +L E ++ Sbjct: 187 QGSLKTKDDYAKILDIIENQLGKEVVKHLHVHFSIIEFTKAGEKKHWTLRESHLYGPDFA 246 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 ++ + + + + +I E+ AE+ K+ + Sbjct: 247 PLAELIVERQMEPV-IICESAGTQ--AEDALIFKSMVKK 282 >UniRef50_Q3Z9G2 AP endonuclease, family 2 protein n=5 Tax=Dehalococcoides RepID=Q3Z9G2_DEHE1 Length = 276 Score = 140 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 20/260 (7%) Query: 15 ANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 N R AE+ + F R T + ++ H Y Sbjct: 21 QNGIHRVAELGLDGMEIEFV---RGVYMKAPDTNPVRILSELLR------IKLSAHAPYY 71 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 +N ++ S+ + G L FHPG +L S I ++I Sbjct: 72 LNFNAVEENKVKMSQHLLYQSAKTASLCGAGSLVFHPGFYLTD-SPSAAYEAIRDNIRPV 130 Query: 134 LDK--TQGVTAVI-ENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 ++ +G + +G+ + G L + + + ID H A Sbjct: 131 AERLQKEGFPISLRPEVSGKVTQFG----DLKETMALCSEIPGLLPTIDFSHYHARTGKF 186 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHDAFRWIMQ 249 + +E A +G L+ MH++ + + R +R H +L E + + ++ Sbjct: 187 NSYSEFSFMLTTMADYLGESALKNMHIHISGIDYSPRGERQHLNLAESDFNYKELLLCLR 246 Query: 250 DDRFDGIPLILETINPDIWA 269 D G+ +I E+ N + A Sbjct: 247 DKGCAGL-VICESPNLEEDA 265 >UniRef50_D1YXC1 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YXC1_METPS Length = 602 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 89/283 (31%), Gaps = 35/283 (12%) Query: 6 AHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ 65 +H + + + + LF K E T+ Sbjct: 6 SHRIQSESDVRSIQSLEDNGFSCCELF--------FPEREPLDAQTLKLIDEVSGTTNLL 57 Query: 66 ILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS--EEDC 122 + H + IN+ + S D ++ + ++ H G +S E Sbjct: 58 LTAHLPFKNINIASVYQYVKDSSVDMLAGMIESLSDY-VRMVTIHTGYASPSVSGGLEKA 116 Query: 123 LARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + S+ D+ + +EN + +G F + II GV ++ VG+ D Sbjct: 117 IESNVLSLAKICDRAGQYDIMVGVENAMNEKYMVGRNFAEMERIIKGV-NRGNVGLTFDV 175 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 HA G + +Y+ +H +D D H +LG G I Sbjct: 176 GHARLTG----NIEDYLDR---------TEYIVEVHAHDNFG----YTDEHLALGHGKIN 218 Query: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKA 283 ++D P +LE + E I + ++ +E + Sbjct: 219 WGYVYDKVKD---LNCPFVLEQKTVEEGLESIKYWQSLSSESS 258 >UniRef50_Q0W4S5 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W4S5_UNCMA Length = 261 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 85/283 (30%), Gaps = 28/283 (9%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 Y G+ G + + A + + + + K ++Y Sbjct: 1 MYAGSLADPRGDIGQEIVYARDAGFDYVEISMEGPNSTIEKL--SPGAPGLKKLKDEYGL 58 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 H + N+G+P + E + ++ ++ E + L+ H + + Sbjct: 59 ---FYTCHTPWGWNIGNPYPKIREATVRQVLEVIEFAEAVEARLVTVHMHTRFGLYDRRE 115 Query: 122 CLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + +A S+ + D+ + G+ +EN + E + + + R +D Sbjct: 116 LIRNMASSLTVLCDRAEKSGLAITVEN-------VDQAPEDFKKLFEL---EPRARFHLD 165 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA + + F L +H +D K D H +LG GNI Sbjct: 166 IGHANISCTGCNNIVAFIEAFK--------DRLYHVHAHDNKGGHNVEADLHLALGMGNI 217 Query: 240 GHDAFRWIMQDDRFDGIPLILE--TINPDIWAEEIAWLKAQQT 280 ++ + + E T N + Sbjct: 218 DWPRVVRALKAAGYKH-TVTFEVFTHNRQYLEISKDLFRDLWE 259 >UniRef50_A8MDH2 Xylose isomerase domain protein TIM barrel n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDH2_CALMQ Length = 279 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 26/273 (9%) Query: 5 GAHVSAAG--GLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 G + G + +I A + F + R ++ + + Sbjct: 10 GVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVR------MSITDAENAGKLAREIGV 63 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + H Y INL +E S ++ ++R E +G +++ FHP ++ ++ E Sbjct: 64 R---LSIHAPYFINLCSDKDSTVEASIKRLMESLERGEAMGATVVVFHP-AYYGKLGPEG 119 Query: 122 CLARIAESINIAL-----DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 C + ES+ + + V +E A + S G E ++ + + V V Sbjct: 120 CYNAVRESVMRVIELMGKEGISHVKLGLEVMA-RRSQFGG-LEETFKLVKEINNPQVVAV 177 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 +D H +A + + + G + + H K G VD H + Sbjct: 178 -VDWGHIYARNGG---SIDYKAILNMWREYFGNQPM-HTHFTAVKYRRGEWVDEHEPIDT 232 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWA 269 N + + + I +I E+ + A Sbjct: 233 NNPPFEPLAQELAKEDL-DITIICESPLLEQDA 264 >UniRef50_D1PP50 Deoxyribonuclease IV n=6 Tax=Clostridiales RepID=D1PP50_9FIRM Length = 286 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 92/273 (33%), Gaps = 29/273 (10%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI 74 A A TAF + R L + AC + + + H Y I Sbjct: 24 EGIASYTAGFGLTAFEY-----QCGRGVRLALDKAEALGKACAEKNI---SLSVHAPYYI 75 Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL 134 ++ + S D + + LG + FH GS + S E+ L + +++ A+ Sbjct: 76 SMSSLEEDKRLHSIDYLLQSCALVKALGGRRVIFHTGSC-GKQSREEALEKALDTMRRAV 134 Query: 135 DKTQGV----TAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 + + T G+ + LG L ++ + R+ CID H +A + Sbjct: 135 EACDAAGFADCILCPETMGKVNQLGT----LDEVLALCQVDERITPCIDFGHLYARSQGV 190 Query: 191 -----RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGH--D 242 + + +G + H + ++ + ++ H + + G Sbjct: 191 QFAEATATEDYAALLDKL-QVLGPERASRFHAHFSRIAYTKGGEKCHLTFADTEYGPPHA 249 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 ++++ +I E+ AE+ A L Sbjct: 250 PLLALLKERGLAP-TIICESAGTQ--AEDAAVL 279 >UniRef50_Q5NVW6 Predicted sugar phosphate isomerase / epimerase n=3 Tax=Archaea RepID=Q5NVW6_9ARCH Length = 259 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 94/266 (35%), Gaps = 35/266 (13%) Query: 22 AEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPV 80 ++ + + ++ +++ +T +T+ E K+ + I H + ++L Sbjct: 23 EDMGYEGWEIVSEGKQK-----ITPETLPEIKSIINTTNLR---ITVHGPFSQLDLASLH 74 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIA--LDK 136 ++ ++ + HPG S L + ++ R E++ I + Sbjct: 75 EPLWNETIRQIRQCVELSADF-TDTVVVHPGILSPLGREMKDKAWERNVEALKILARHAE 133 Query: 137 TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAEC 196 V +EN L + L +++ V +G +D HA T Sbjct: 134 EHRVKLCLENMPDMEKLLCRTPDELFGMVETVGS-DGLGTTLDVGHA-------NTTKNI 185 Query: 197 EKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGI 256 + + + +H++D K D H ++GEG + +++ + Sbjct: 186 PAFLREV------RRINHIHIHDNKG----TSDEHLAVGEGTVDWTRVFKGLKEYKGA-- 233 Query: 257 PLILETINPDIWAEEIAWLKAQQTEK 282 L++E + + ++K Q+ + Sbjct: 234 -LVVEGRTLEEGRRSLGFVKKQKAKS 258 >UniRef50_D1YUX5 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YUX5_METPS Length = 263 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 87/269 (32%), Gaps = 28/269 (10%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 + A + + + + + L+ + H + Sbjct: 15 ILQEINYAKDAGFDFLEISAEGPKFTTSKLLS-----RAGEIKKARDEAGIFFTCHTPWG 69 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 N+G+P + + I + E++ L+ H + ++ + +AE +++ Sbjct: 70 WNVGNPYKPIRDATLSEVIGVIGFAEEVEARLVTVHMHTRFGLYHRDEMIRHMAEGLSVL 129 Query: 134 LDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 D+ + G+ +EN + + + + + R +D HA + Sbjct: 130 CDRAEKSGMPVTVEN-------VDQSVDDFKKLFEL---EPRAKFHLDVGHANISCKGGA 179 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDD 251 A+ TF L +H++D K G D H +LG GNI ++ Sbjct: 180 NIADFIDTFK--------DRLYHVHVHDNKGGHGVDGDLHLALGMGNIDWHKVVNALKAA 231 Query: 252 RFDGIPLILE--TINPDIWAEEIAWLKAQ 278 ++D + E + N + + Sbjct: 232 KYDK-TVTFEVFSKNRQYLETSLDVFRGL 259 >UniRef50_A2ST75 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST75_METLZ Length = 256 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 82/267 (30%), Gaps = 35/267 (13%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INL 76 E+ + + + F A + H + +N Sbjct: 18 VSEIPEVGFDGWEISADGN-------YRLDKPETFSAVKRVIDENGLDVSVHAPFSDLNP 70 Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIAL 134 E++ F +++ +L + HPG S + + E ++ Sbjct: 71 ASINMPIWEETVRQFTVCIEQAAEL-TDTVVLHPGYLSPVSRFDEASAWNNHKQACIRLG 129 Query: 135 DKTQGVTA--VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 + Q V +EN +DGV +G+ +D HA G Sbjct: 130 ETAQRVGITACLENMPNLDDFFCRDPYEQEGFVDGVPG---MGLVLDIGHANTTGN---- 182 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR-WIMQDD 251 +F + + +H++D + D H LG G I D I++ Sbjct: 183 -------LDEFCKII-LPKAHHLHIHDNHG----KYDEHLPLGGGTINWDKIMPRIVK-- 228 Query: 252 RFDGIPLILETINPDIWAEEIAWLKAQ 278 + G +++E NP + + +L+ Sbjct: 229 EYKGKIIVVEGRNPKEGKKSLEFLRKW 255 >UniRef50_C6HUL2 Apurinic endonuclease (APN1) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL2_9BACT Length = 159 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 5/149 (3%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 + G HVS AGGL R + +F+ + R W + ++ + A + Sbjct: 14 LPRFGLHVSTAGGLDRIFARGEALACGTVQIFSHSSRSWEFSLPDEPLLETYAGARSRAS 73 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + + + H SYLIN+ + KS + E+ LG L HPGS Sbjct: 74 F--SDVFIHASYLINMASEDPDIARKSVETLEKELSTARLLGAKGLVLHPGSARG-GDRP 130 Query: 121 DCLARIAESINIALDKTQG--VTAVIENT 147 + R A I LD+ G ++ENT Sbjct: 131 KAVQRAASRIREVLDRVPGEAPPLLLENT 159 >UniRef50_A5I5J9 AP endonuclease, family 2 n=18 Tax=Bacteria RepID=A5I5J9_CLOBH Length = 272 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 100/268 (37%), Gaps = 24/268 (8%) Query: 17 AAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN 75 I A L F ++ +T + + ++ + H SY IN Sbjct: 25 GITYLNNIGLDAMELPFVRS------VNVTDKNKEGILEEKNNNNFY---LSAHGSYFIN 75 Query: 76 LGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALD 135 L E EKS + I + +Q+ L FHPG +L + S+E+ I E++ D Sbjct: 76 LNADEIEKQEKSMERIIKGAEGLKQVQGRSLIFHPGFYL-KDSKEETFKTILENLKKLPD 134 Query: 136 KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AGYDLRTPA 194 T G+G+ G E A+ V+ +CID H A + L++ Sbjct: 135 LGVDYRL---ETTGKGTQFGS-LEENVALCKEVDT---CKLCIDFSHIHARSNGGLKSYK 187 Query: 195 ECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHDAFRWIMQDDRF 253 + + + +G L MH++ + + + +R H E + + A +D Sbjct: 188 DFYNILSYVEKNLGRSALDDMHIHLSGIHYSEKGERNHLPFEESDFNYIACLKAFKDFDI 247 Query: 254 DGIPLILETINPDIWAEEIAWLKAQQTE 281 G +I E+ + ++ LK E Sbjct: 248 KGC-VICESPILE---KDALLLKNSYYE 271 >UniRef50_A5UMG1 Sugar phosphate isomerase/epimerase, AP endonuclease family 2 n=2 Tax=Methanobrevibacter smithii RepID=A5UMG1_METS3 Length = 248 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 44/283 (15%) Query: 2 KYIGAHV--SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 IGA + E+ + + Q F+ KY Sbjct: 1 MKIGASTLSGFKDDIGTNLEYFEELGLDYAEILHQYPNQ-------DLDTSIFENYSLKY 53 Query: 60 HYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HLMQ 116 H + +N+ + S + ++ ++ HPGS L + Sbjct: 54 -------SVHSPIINLNIASLTENIRQASIAEIKKSIDLANEIDAEIVVVHPGSIPFLGR 106 Query: 117 ISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRV 174 ++ +SI + + GV A IEN + L ++ ++ + Sbjct: 107 DFKDKIFELNKQSIEEIGEYGKELGVNAAIENMPTFEGYMYSNPYELNELVTSLD----M 162 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 + +D HA AGY P + F ++ +H +D D H++L Sbjct: 163 SMTLDIGHANHAGYG---PEDMY-----------FDSIKHIHAHDNNGD----DDSHYAL 204 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 G+G+I + +D ++DG I+E D + +LK Sbjct: 205 GDGSIDLKSIISTFEDKKYDG-TYIIEVNEKDWVKKSYNYLKN 246 >UniRef50_B1L7K8 Endonuclease IV n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7K8_KORCO Length = 281 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 95/271 (35%), Gaps = 26/271 (9%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI 74 A EI A + RA P + + + + H Y I Sbjct: 20 ERAFSYLREIGLDAMEY-----QAVRAIPKNEDVLSWVRKEASENDI---MLSLHAPYAI 71 Query: 75 NLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL 134 NL E E S ID ++G + FHPG + ++S ED L E++ Sbjct: 72 NLCS--EEKGEASIKRLIDSGIAASKMGAGHITFHPGYY-GKMSGEDALRAAIEALKRVR 128 Query: 135 DKTQGVTAVIE---NTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA-GYDL 190 D + +E T G+ S LG L ++ E+ V ID H A G + Sbjct: 129 DGLNSLGINLELGPETTGKPSQLGS----LDEVLRMSEEVDGVRPTIDFAHIHAREGGSI 184 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLND---AKSTFGSRVDRHHSLGEGN-IGHDAFRW 246 R + E+ +G +H + AKS G R HH LG G + Sbjct: 185 RGRGDYERILRTIEGRLGDLNGLIIHFTEVELAKSGIGER--MHHDLGSGYGPPFEPLAE 242 Query: 247 IMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 I+ + I +I E+ + + ++ L Sbjct: 243 IIAEYGLRWI-VISESPLLERDSVKMRALYM 272 >UniRef50_A1RRV6 Endonuclease IV n=17 Tax=Thermoprotei RepID=A1RRV6_PYRIL Length = 283 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 97/279 (34%), Gaps = 29/279 (10%) Query: 8 VSAAGGLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQI 66 V+ A +A E+ A + F + R ++ + + A ++Y+ ++ Sbjct: 22 VAKARSTLDAVRVVRELGLNAMEVEFVQGVR------MSRELAKQVGKAAQEYNI---KL 72 Query: 67 LPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARI 126 H Y INL T+ +EKSR +D + R +G ++ H ++ ++ + C ++ Sbjct: 73 SVHAPYFINLCSEETDKVEKSRQRLVDSLDRAYYMGAWVVVVHA-AYYGKLGPQKCYEKV 131 Query: 127 AESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 E + A + V + + G + ++ V +D H + Sbjct: 132 KEELEKAYKESGVGSGVYVGVEITARTNQFGS----IEETFKLAKELPFVTPVVDWGHLY 187 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF--GSRVDRHHSLGEGNIGHD 242 A + + + + G R MH + + G VD H + + Sbjct: 188 ARNNGVLN---YGEVLDLWTKEFGD---RHMHTHFTSIRYRNGKYVDEHEPIERNMPPFE 241 Query: 243 AFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 + I LI E+ + ++ +K + Sbjct: 242 PLAKELSARDIT-ITLICESPLLE---KDALLMKEILEK 276 >UniRef50_Q9EMJ6 AMV210 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMJ6_AMEPV Length = 612 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 90/275 (32%), Gaps = 39/275 (14%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATA-FALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 KYIG H L F +++ Sbjct: 13 KYIGFHT-IKEYLDK---------YKCPLQFFVGAPHSYQSTEY------------LNKS 50 Query: 61 YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 YT I H Y+ N+ ++ + +Q ++ S H S ++E Sbjct: 51 YTGRTIFVHSKYVGNIAKDKNSVALRNIKKELLYLQNM-EINNSGTVVHL-SLYYNKNQE 108 Query: 121 DCLARIAESINIALDKTQGV------TAVIENTAGQGSNLGFKFEHLAAIIDGVED--KS 172 + L +A +N + +I T +LG K E + D ++ K Sbjct: 109 ESLKYVANELNKFCKVLDNILDNNYFNHIIFETTNDIRHLGAKTEDFKILYDNLDSNAKK 168 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 R+ CIDT H F Y++ T A F +G + +HLND+ S H Sbjct: 169 RIKFCIDTSHIFVTFYNINTVKGMINYLAKFDLLIGLDKIILIHLNDSCGLPLSSYKPHE 228 Query: 233 SLGEGNI------GHDAFRWIMQDDRFDGIPLILE 261 ++G+GNI + + IP ILE Sbjct: 229 AIGKGNIFKNYKDDLSSLHILKTYATLYNIPCILE 263 >UniRef50_Q2NGK4 Predicted sugar phosphate isomerase/epimerase or endonuclease n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NGK4_METST Length = 252 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 79/220 (35%), Gaps = 26/220 (11%) Query: 62 TSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ--IS 118 + H +N+ V + + S + +D + G + HPG+ + Sbjct: 49 YDLGLSIHAPMSDVNIASHVKKIRDISVELMVDSFKLANDWGAERVVVHPGTIPIMALKY 108 Query: 119 EEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 E L ES+ + GV +EN L + A+ D V+++ G+ Sbjct: 109 PEKILKYNVESLIKCQRAAQEYGVMMCVENMPLFERMLYTNVD---ALFDLVDNEIHSGI 165 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 +D HA G+ + +HL+D ++ D HH+LG Sbjct: 166 TLDVGHAHNNGFAPEN-------------MFKSDNIHHIHLSDNDGSY----DMHHALGS 208 Query: 237 GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK 276 NI I++ ++D I ++E + I +LK Sbjct: 209 HNIDFPKIFDILKQKKYDDI-CVIEVRTLQGILKSIDYLK 247 >UniRef50_C0Z8T0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8T0_BREBN Length = 273 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 94/270 (34%), Gaps = 27/270 (10%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 L +A ++ + D + + L + ++ K ++ + H Sbjct: 18 SLRDAIVQLLQKDWKGIEIMCEENH----VDLLDWSWEQLKELKQQGNERGIAWSIHAPI 73 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG---SHLMQISEEDCLARIAE 128 NL +++ D ++ L + + H G L + + +++ Sbjct: 74 SGCNLAADAGPTRDQTLDTMKRCLEIASFLDCTHVVMHAGEVEDRLAETERARGVENVSQ 133 Query: 129 SINIA---LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 ++++ L +EN LG+ E L I V + SRVG+ D HA Sbjct: 134 ALHVLTSELSAESRTILTVENVPPYPKVLGWSVEDLMRICRHV-NSSRVGIVYDVGHAH- 191 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR 245 L P YL +HL+D ++D H ++GEG I + Sbjct: 192 ----LIRPGYAIDALQKV-----LPYLSALHLSDNFG----KLDDHLAVGEGTIPFEPIL 238 Query: 246 WIMQDDRFDGIPLILETINPDIWAEEIAWL 275 +++D+ F G ++ET + L Sbjct: 239 SLLKDNGFAG-HWVVETKQLGCAEVSVERL 267 >UniRef50_B8D5D1 Endonuclease IV n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5D1_DESK1 Length = 288 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 21/268 (7%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 + A I A R ++ + A ++ H Y Sbjct: 20 ITEAPAFIRRIGLNAMEY-----EAVRGINISDEKARILGEASRGQGV---KLSLHAPYY 71 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 INL + + S + ++ +G ++ FHPG + S+ + +I +++ Sbjct: 72 INLA-GREQVVNSSIERLTASVRISSVMGAYIVVFHPGYYRDAPSKRGAVEKIIRNLSRV 130 Query: 134 LDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA--G 187 ++ + T+G+ S +G L +I+ V ID H +A G Sbjct: 131 VEYRDQQGFKDVWLGPETSGKISQVG----DLEEVIEISSAFKGVRPVIDFAHLYARYMG 186 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIGHDAFRW 246 +R+ + K + +G +YL +H + +K F + HH+LGE G D FR Sbjct: 187 RLVRSKEDIVKIVDVIEKKLGREYLNPLHTHFSKIEFNRGGEKEHHALGEEKYGPD-FRI 245 Query: 247 IMQDDRFDGIPLILETINPDIWAEEIAW 274 + + G+ ++ + +P + + + Sbjct: 246 VCEALCEVGVDTVVISESPLLEEDSLIM 273 >UniRef50_C6A0Y0 Xylose isomerase domain-containing protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A0Y0_THESM Length = 258 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 90/273 (32%), Gaps = 39/273 (14%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 L A + +++ + + +D + A K + H Sbjct: 15 KSLTLALHKISQLKIDFIEIVNEGYHTLNRHNYKI-QMDFLEEAKLKN-------IIHAP 66 Query: 72 YL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE-----EDCLAR 125 + +N+G + S + + + ++G +L+ HPG + S E R Sbjct: 67 FSDVNMGSLNEKIRRISLELLFETFEIAHEMGSALVVIHPGHYSPLSSRFPKAYEKVQKR 126 Query: 126 IAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 E I+ + G+T +EN G E + ++DG E + V D H Sbjct: 127 SLEEISKI-SQKIGITVALENMPSYPILDGQTPERIKELVDGTE----ILVTFDIGHLNT 181 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR 245 A+ ++ + HL+D D H +LGEGNI Sbjct: 182 VN------AQFDRFIELLE-----DRIIYAHLSDNHGA----NDSHLALGEGNIPWKTLI 226 Query: 246 WIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 ++ IP+ LE + + + +L Sbjct: 227 NQLR-----NIPMSLEVKTFEDILKSLEFLNKM 254 >UniRef50_D1YXJ1 Putative endonuclease IV n=1 Tax=Methanocella paludicola SANAE RepID=D1YXJ1_METPS Length = 291 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 36/285 (12%) Query: 1 MKYIGAHVSAAG--------GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEF 52 M IG AG G + A + + R +T + Sbjct: 24 MIRIG----IAGIPYHAKGEGTEAGIRYLCSVGLDAMEV-----QFVRNVYMTPGSAPAS 74 Query: 53 KAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 + ++ + H Y INL EKS+D + ++ + LG ++ FHP Sbjct: 75 GSVAKECGL---ALSVHAPYYINLTSKKEATQEKSKDWILRSLRIADPLGARIVVFHP-- 129 Query: 113 HLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 + E + E ++ +E T G LG + I+ V Sbjct: 130 -AREKEPEVLKRHLVELSESRKNEKIKALIGLEVT-GDEPELGS-VDDYLDILREVPGTD 186 Query: 173 RVGVCIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-R 230 + ID H A LRT + E F H++ + + + + R Sbjct: 187 ---IVIDWSHVHARTNGGLRTRDDYEDIFDKLKPV----KKNNFHMHFSNVEYKNGREVR 239 Query: 231 HHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 H LG + I+++ + D +I ET + A ++ + Sbjct: 240 HLPLG-SQPPFEPLAQILKERKIDA-TIICETPLQEDDALKMKAI 282 >UniRef50_Q9YVX5 ORF MSV117 putative DNA polymerase beta/AP endonuclease, similar to Rattus norvegicus GB:M13962 and Caenorhabditis elegans GB:Z47812 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVX5_MSEPV Length = 603 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 97/296 (32%), Gaps = 41/296 (13%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 IG H + A E F + + ++ Sbjct: 1 MLIGFHT-TKDFIK---EYANEY---VLQFFLGSPFSYLSSTTPIPFKANKHN------- 46 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLL--NFHPGSHLMQISE 119 +I H Y+ N+ + + + E+ + L ++ FH + S+ Sbjct: 47 ---KIFIHSKYVGNIANSKSHV---TISNLKKEIVYLDTLNVNKCGSIFHLTKIVD--SK 98 Query: 120 EDCLARIAESINIALDKTQGVTA-----VIENTAGQGSNLGFKFEHLAAIIDGVEDK--S 172 E + I S+ K + VI T+ ++G E LA I + + + Sbjct: 99 EKSINTIVSSLEKLSSKLDSLNLNTFNYVIIETSNIVDHIGSTIEDLALIYNKLSSHTKN 158 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 RV CIDT H F Y + T F +G + +HLND++ S + H Sbjct: 159 RVRFCIDTAHIFNTYYAINTVKGIVDYLIKFDVLIGLNKVVAIHLNDSEGMPLSSIRPHI 218 Query: 233 SLGEGNIGHD------AFRWIMQDDRFDGIPLILE----TINPDIWAEEIAWLKAQ 278 S+ EG I +D I + IP ILE T + +EI Sbjct: 219 SITEGKIFYDYKSKLSPLHIIKLFSLYYNIPCILERKTITDDLSEINKEIKIFNNL 274 >UniRef50_A3CT33 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CT33_METMJ Length = 244 Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 35/239 (14%) Query: 46 TQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLS 104 + F+ C + H IN+ + +D C+++G Sbjct: 37 PHNLFRFEEVCRSFDLR---YTVHAPVADINIASENERLRRAAVRVLLDLAAVCDRIGAE 93 Query: 105 LLNFHPGSHLMQISE---EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHL 161 L HPG + + L R + + A+ + V +EN E L Sbjct: 94 RLVVHPGHVWGEEMRVVAQAALDRSLDDL-AAVQQEVNVRFAVENMGAWEICFFRSPEFL 152 Query: 162 AAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAK 221 + + +G +D HA G A + +HL+D + Sbjct: 153 DRLANR-----NLGFALDVGHAHTNGN--------------LASFLEQGTAIHVHLHDNR 193 Query: 222 STFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 D H + G+GNI + G+ ++E + + LK Sbjct: 194 G----SRDDHLACGDGNIDLCRVMAALP----PGVTKVVEPNTFQDYERSLEHLKGLSP 244 >UniRef50_B8FPG2 Xylose isomerase domain protein TIM barrel n=9 Tax=Clostridiales RepID=B8FPG2_DESHD Length = 273 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 89/271 (32%), Gaps = 24/271 (8%) Query: 14 LANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 A I A L F + +T A +K + + H S+ Sbjct: 22 YATGIHYLKSIGLDAMELLFVHS------VNVTDNNKGAILEAKQKEGFY---LSAHASH 72 Query: 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINI 132 INL +S ID + ++G L FHPG ++ +E A I ++ Sbjct: 73 YINLNSNDIAKQNQSITRIIDAAKGLAKVGGRSLVFHPGFYMSDA-KEAAYATIKSNLMR 131 Query: 133 ALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-AGYDLR 191 T G+GS G E L A+ V +C+D H A + L+ Sbjct: 132 LSSCGIDYRL---ETTGKGSQFG-TLEELVALCQEVPL---CKLCLDFAHIHARSNGGLK 184 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR-HHSLGEGNIGHDAFRWIMQD 250 + +G L +H++ + + +R H L E + + ++D Sbjct: 185 NYDDFAGVLKYVLDHLGRTALEDLHIHMGGIRYTVKGERSHAPLLESDFNYQECLRAIKD 244 Query: 251 DRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 G +I E + + LK + Sbjct: 245 YDVRGC-IIAEGPLLE---RDALLLKETYEK 271 >UniRef50_Q58587 Uncharacterized protein MJ1188 n=5 Tax=Methanocaldococcus RepID=Y1188_METJA Length = 270 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 100/299 (33%), Gaps = 51/299 (17%) Query: 1 MKYIGAHVSA----AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 M IG VS + +I F +N W I + + Sbjct: 1 MMKIG--VSTLFFWEYPMVEIFDIFRDIGIKCMEFFPENPDFWDNR-FDLDYIADLRKEF 57 Query: 57 EKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM 115 K+ + H+ ++ +N E + ++ + L+ HPG Sbjct: 58 LKFD-----VALHNPHIELNPSSLNPYVREAVIKETLWSIELAKFYRCKLITIHPGKRPT 112 Query: 116 QISE-EDCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 S ++ + ++ L+ + +T +EN + + +G+ E + I+ Sbjct: 113 NRSPTDEEYEAFFKYLDRTLEVAINKNITICVENMPERINRIGWSPEEMEWILKR--YDE 170 Query: 173 RVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHH 232 + + +D HA ++ +F +V Y++ H++ +R D H Sbjct: 171 LLYMTLDFAHA-------------KEYMEEFLESV-IDYIKHTHIS----GVVNRKD-HF 211 Query: 233 SLGEGNIGHDAFRWIMQDDRFDGI-------------PLILETINPDIWAEEIAWLKAQ 278 L + I + + D ++G+ P+ E + ++I +L++ Sbjct: 212 PLRKSEIDFSPYIKALLDYGYNGMFNLELDDRRLEKNPVTKE-EKIEEVIKDIEFLESI 269 >UniRef50_D1Z1Z5 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Z5_METPS Length = 255 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 77/265 (29%), Gaps = 49/265 (18%) Query: 19 IRAAEIDATAFALFTKNQRQWRAAPLTTQ--------------TIDEFKAACEKYHYTSA 64 + + + ++F + W + +K Sbjct: 5 AKGIRLGFSTLSIFMRPPESWADTAIKDNFNAMEILCEGPMWPRSGLWKEKLLGAGNNGL 64 Query: 65 QILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE--ED 121 + H + +N E++ + + +G S + HPG + E Sbjct: 65 DVYLHAPTVDLNPASVNRGIREETLKQLKEALDMAAGIGASHVTTHPGIIHKPLPRIWEM 124 Query: 122 CLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 C+ + + A D +G VT IEN + + L E L GV ID Sbjct: 125 CMEYAMQVLGEAADYAKGHNVTLSIENMPNKPTYLCTSAEELDKFRRNCG----CGVTID 180 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 HA T + + +H+ND D H G+G + Sbjct: 181 VGHA-------ITCPDPVSFLR-------LGGISYLHVNDNMGD----KDSHLCPGDGIL 222 Query: 240 GHDAFRWIMQDDRFDGIPLILETIN 264 + + M D +I+E + Sbjct: 223 DLNLLK--MHDR------MIIELND 239 >UniRef50_A5UMM8 Predicted sugar phosphate isomerase/epimerase, AP endonuclease family 2 n=4 Tax=Methanobrevibacter smithii RepID=A5UMM8_METS3 Length = 239 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 99/270 (36%), Gaps = 42/270 (15%) Query: 22 AEIDATAFALFTKNQRQW--RAAPLTTQTID------EFKAACEKYHYTSAQILPHDSYL 73 ++ T A+FT+ A + I+ FK ++ T +I H + Sbjct: 1 MKLGFTTLAMFTRPNNDIIETAKKYEFEMIEILGEGPFFKNDNLEFANTDLEIYMHAPTV 60 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS--EEDCLARIAESI 130 +N+ T ++S D + +++ + L HPG + L ESI Sbjct: 61 DLNISSLNTGIRKESVKQMKDALDYGKKINATALTIHPGQIGRNEDRIRKYALELAIESI 120 Query: 131 NIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 +D + + +EN + S LG K E L + +++++ G+ ID H G Sbjct: 121 GELVDYS-DIVVSVENMPERFSFLGNKVEEL----ERIQNETGCGLTIDVGHGNTCG--- 172 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQD 250 CE+ K + HLND D+H +LGEG + + + + + Sbjct: 173 ----NCEEFLD-------LKNISYCHLNDNNG----VKDQHITLGEGTLDLNLLKKVDKG 217 Query: 251 DRFDGIPLILETINPDIWAEEIAWLKAQQT 280 I+E N D + +K Sbjct: 218 --------IIELNNFDNVLKSKEVIKNLLK 239 >UniRef50_C4G2Z7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2Z7_ABIDE Length = 289 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 35/278 (12%) Query: 18 AIRAAEIDATAFALFTKNQR-QWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS----Y 72 E L+ P + +K +++ + Y Sbjct: 33 LKSMKECGIKMVDLWGAIPHYCRLDYPFIEDARQKLNEMKQKMKNNGQKVVVYTPETLAY 92 Query: 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINI 132 + P +++ D F M+ LG L + G L+ E+ + ++ Sbjct: 93 PYSFSSPDEAVRKRTVDYFAMAMEDALYLGTDKLFINSGCGLLDHFREESFGYLIDTFKR 152 Query: 133 A--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 L + +G+ ++E SNL + + ++ V VC+D AG Sbjct: 153 IAKLAEEKGIKLLLEQLQPYESNLVVNLQDVKRVLQEVNSP-NFYVCVDVVAMAVAG--- 208 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQD 250 ++ ++ +G ++ +H D+ H+ LG+G + + + +++ Sbjct: 209 -------ESLKEYFEELGRDRIQLIHFADSC---------HYILGDGELPLEKYLKTLEE 252 Query: 251 DRFDGI-------PLILETINPDIWAEEIAWLKAQQTE 281 +DG+ + E + + A + WL+ ++ Sbjct: 253 YEYDGLIDLEINDSIYWENPH-ESIARSVQWLENYFSK 289 >UniRef50_Q57597 Uncharacterized protein MJ0133 n=12 Tax=Methanococcales RepID=Y133_METJA Length = 273 Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 26/271 (9%) Query: 5 GAHVSAAGGLANAAIRAAEIDATAFAL-FTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 G +SA A +++ A L F K +++ ++Y Sbjct: 13 GVPISAEDEF-KAVDVLRKLNLGAMELEFVKGVYM----------KEDYAKKLKEYGEDI 61 Query: 64 AQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCL 123 H + INL E +E S I + G L FHPG +L + S+E Sbjct: 62 IF-SAHAPHYINLNANEEEKVENSIRRIIKTAKVLNNCG-KNLVFHPGYYL-KRSKEVTY 118 Query: 124 ARIAESINIALDKTQGVTA---VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 RI +I LDK + + + T G+ + G E L + + CID Sbjct: 119 NRIKSNIQRILDKLEALNLNVMLRPETTGKTTQFGDIDETLKLCFEL-----NILPCIDF 173 Query: 181 CHAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGN 238 H +A + K +G + ++ MH++ + +G + RH L E N Sbjct: 174 SHIYARSRGVINDYNSFYKILEKVENVLGKEAIKDMHIHLSGIEYGKGGERRHLPLNESN 233 Query: 239 IGHDAFRWIMQDDRFDGIPLILETINPDIWA 269 + ++D G +I E+ + A Sbjct: 234 FNYRDVLKALKDFDASG-TVICESPMLEYDA 263 >UniRef50_A3CVT4 Xylose isomerase domain protein TIM barrel n=4 Tax=Methanomicrobiales RepID=A3CVT4_METMJ Length = 257 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 85/263 (32%), Gaps = 35/263 (13%) Query: 22 AEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPV 80 EI T + + + F A E T H Y +NL Sbjct: 24 EEIGYTGWEI-------VADGKYRLDNPENFAAVRENLESTGLLATVHAPYSDLNLASLN 76 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIA--LDK 136 +S +Q +L + HPG S + ++ E ++ + Sbjct: 77 YPIWRESIRQTCCCIQHAAEL-TDRVTVHPGFVSPIGKLVPEKVWEMQKTALVEIGKCAE 135 Query: 137 TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAEC 196 GV A +EN L E + + +G+ +G+ +D HA G Sbjct: 136 DHGVLACVENMISIKDFLCRYPEEILGLTEGIAG---IGITLDVGHANTNGL-------V 185 Query: 197 EKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGI 256 + + +H++D + D H +LG+G I + ++ + G Sbjct: 186 DAFLTHVTE------VDHLHIHDNHG----QSDEHLALGDGTIAWEKVGRVI-ARDYSG- 233 Query: 257 PLILETINPDIWAEEIAWLKAQQ 279 P+++E N + +A + Sbjct: 234 PVVIEGRNLEEAKRSLAAFRKWF 256 >UniRef50_A5ULU0 Endonuclease IV, xylose isomerase-like TIM barrel family, Nfo n=4 Tax=Methanobrevibacter RepID=A5ULU0_METS3 Length = 278 Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 96/282 (34%), Gaps = 26/282 (9%) Query: 5 GAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSA 64 G+ V+ G A E ++ + + ++ K EK+ Sbjct: 11 GSPVNYKGAAYKAPKYIKEEGLDSYEY-----QSPYGVRIGEKSAKILKEESEKHDI--- 62 Query: 65 QILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLA 124 I H Y INL E ++KS + I + E +G L FHPG + + + Sbjct: 63 LISMHGPYYINLCSKEEEKIKKSLNHLIATARAGEWMGAYRLVFHPGFYSNRK-PGKAME 121 Query: 125 RIAESINIALDKTQGVT----AVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 +IN ++ + T G+ S G ++ II+ +D Sbjct: 122 ISKNTINQLFEELEAEGIEEFTFAPETTGKRSQQGN----VSEIIELCASFDHFEPTVDF 177 Query: 181 CHAFAAGYD-LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGN 238 H A G L + F+ + + +H + +G+ + +HH+L E N Sbjct: 178 AHVHARGRGFLNKKEDYNCIFSQLEDNLD---IDILHCHFTTIEYGNGGEVKHHTLAESN 234 Query: 239 ---IGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 + D+ + +I ET D A ++ L Sbjct: 235 EYGPDIKDLLANLIDNGWRA-NIICETPLRDEDALKMKELYE 275 >UniRef50_UPI0001C36838 binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36838 Length = 281 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 16/237 (6%) Query: 21 AAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPV 80 + L+ + W Q +++ K C + + +P +Y GH Sbjct: 26 MEATGIRSLELWMGSPHFWIDTTGYFQCLEKKKQICGHQLHVVSACVPSMAYQYQYGHGN 85 Query: 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA--LDKTQ 138 E EKS F + ++ +G ++ + GS + E+ + AE +N + + Sbjct: 86 KEYREKSFQFFSNGIKAAAAMGAKVVVVNSGSCEYGVPFEEAVKGPAELLNRLGRVAGQE 145 Query: 139 GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEK 198 GVT IE+ +N+ +H +I + S + DT + AG + Sbjct: 146 GVTMAIESLTADETNIADNLKHTKELIRQADTPS-LKAMADTVAIYFAG----------E 194 Query: 199 TFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 T ++ + G +H++ R H + G+G M+ + G Sbjct: 195 TLEEWFQAFGKD---LIHMHFIDGFIKKRTYDHLAWGDGEFPLAEMVRCMEKYEYTG 248 >UniRef50_Q59009 Uncharacterized protein MJ1614 n=6 Tax=Methanococcales RepID=Y1614_METJA Length = 251 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 28/223 (12%) Query: 62 TSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + H +NL + S D D ++ ++ L+ HPG + + E Sbjct: 53 YDLKYTLHCPITDLNLSSYRERIRKVSLDFVRDVLEVAIKVDAKLIVLHPGYCVFKYDYE 112 Query: 121 DCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L + +S+N + + GV IEN + + II+ + + + + + Sbjct: 113 KALNSLIKSLNDLNNIQEEFGVQITIENMPSYDMFMFRNPD--KEIIENLGE---LKITL 167 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 D H+F + K + +H++D F D H +G+G Sbjct: 168 DIGHSFLN----KNIENFLKI---------SDKIAHIHIHDNNGEF----DEHLCIGKGK 210 Query: 239 IGHDAFRWIMQDDRFDGIPLI-LETINPDIWAEEIAWLKAQQT 280 I + F+ ++ + + I +I L+ + D I LK Sbjct: 211 INFNNFKKDLK--KINAIKMIELQNKSIDDLDLCIDNLKEILR 251 >UniRef50_B1I648 Xylose isomerase domain protein TIM barrel n=3 Tax=Clostridiales RepID=B1I648_DESAP Length = 287 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 25/279 (8%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 A + +A+ + R ++ +T + + H Sbjct: 20 KSSLEAPAWLRGLGLSAYEY-----QCVRGVNISERTARALGERASENGI---ALSIHAP 71 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN 131 Y INL + KS+ + M+ +G S + FHPGS + L R ++ Sbjct: 72 YYINLAGEDPVQVAKSKVHLLKSMRAAHWMGASRVVFHPGSVRG--DRKGALRRAQAALE 129 Query: 132 IALDKTQGVTA----VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA-A 186 AL++ V+ T G+ S LG L +++ V CID H A Sbjct: 130 AALEEAAREGLDSVNVLPETLGRYSYLGL----LDEVLELCRVAPTVIPCIDFGHVHAIT 185 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSLGEGNIG--HDA 243 G + +G LR +H++ + F ++ + RH +L + G Sbjct: 186 GGLMTDREAYAAVLDRVGAALGKDVLRTLHIHFSPVEFTAKGERRHRTLADEGYGPNFGP 245 Query: 244 FRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEK 282 ++ + +I E+ E+ + E Sbjct: 246 LAELLVERGLTP-TVICESNGTQS--EDACTYRDIYREA 281 >UniRef50_Q12U55 Protein with xylose isomerase-type TIM barrel domain n=5 Tax=Methanosarcinales RepID=Q12U55_METBU Length = 257 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 34/266 (12%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INL 76 EI T + + + + + + + + E + + H + +NL Sbjct: 21 VYELEEIGYTGWEIVQEGSQC-----INRENLHRIEEVLETTNLY---LTMHLPFSDMNL 72 Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIAL 134 + + + + L HPG S E SI Sbjct: 73 AGLNPGIQGEVLRQMKHYLSVASDI-VELAVVHPGYLSPYGGKIPEKAWDMNISSIQELC 131 Query: 135 D--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 D G++ +EN G + + + ++ V D+ VG+ +D HA + Sbjct: 132 DTADEYGMSIAVENMPNFPMIFGREPDEMLRMLSDV-DRDNVGMTLDVGHANTS------ 184 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDR 252 F + + + +H++D + D H G G + + + +++ Sbjct: 185 -----AMVEGFLKKCNKE-IIHVHIHDNMG----KRDEHLPTGSGTVNWEHVKKGLENYE 234 Query: 253 FDGIPLILETINPDIWAEEIAWLKAQ 278 ++ E + + + + +LK Sbjct: 235 GR---MVTELSDLEEARKSVEFLKQL 257 >UniRef50_O27533 Conserved protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27533_METTH Length = 249 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 81/270 (30%), Gaps = 42/270 (15%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 L N +A + L + R +++ F++ + +L H Sbjct: 14 PLENILQKAEDDGFELVELLCEGPYWPRRLLQDGDSLEVFESFDLE-------VLIHAPT 66 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAES 129 + +N E++ ++ ++ ++G + + HPG L E+ Sbjct: 67 IDLNPASMNRGIREETGRQMVETIELASRIGATTVTTHPGVVHRREDRIRSAALQFALET 126 Query: 130 INIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 + ++ + + +EN G+ S L ++ +D HA G Sbjct: 127 LGECVEYAEDLSIKFSVENMPGRFSYLCNNPAEHERFVEKCGS----YATVDIGHANTTG 182 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 + K H++D + D+H LGE + I Sbjct: 183 --------------RLQDFLEIKRTAHYHISDNNG----KRDQHLPLGEVTVDLKLLGSI 224 Query: 248 MQDDRFDGIPLILETINPDIWAEEIAWLKA 277 + ++E + D L+ Sbjct: 225 ERG--------VIELNSYDGVIRSRRILEE 246 >UniRef50_O26349 Conserved protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26349_METTH Length = 233 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 85/274 (31%), Gaps = 50/274 (18%) Query: 1 MKYIGAHVSA----AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 M IG VS L + A + ++ +T EF Sbjct: 1 MMRIG--VSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLS--EVEVTDSHSLEF---- 52 Query: 57 EKYHYTSAQILPHDS-YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--H 113 H IN+ E S + +L ++ HPG+ Sbjct: 53 ----------TVHAPISDINIASLNDTVREASIREVESAVDLAVELDSDVVVVHPGTVPF 102 Query: 114 LMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 L + + R ES+ + GV EN L + E L + + + Sbjct: 103 LGRPYRDLIAERNLESLAAISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELG-- 160 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRH 231 V V +D HA GY + ++ +HL+D VD H Sbjct: 161 --VMVTLDAAHAATMGYS--------------TEEMVSAHVGHVHLSDNTGE----VDSH 200 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILETINP 265 +LGEG++ A ++ + G+ L +E P Sbjct: 201 DALGEGSLDFQALLDGLRGAGYTGV-LTVEVKTP 233 >UniRef50_Q0W7H9 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7H9_UNCMA Length = 251 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 71/240 (29%), Gaps = 39/240 (16%) Query: 20 RAAEIDATAFALFTKNQRQWRAAPLTTQ--TIDEFKA------------ACEKYHYTSAQ 65 R I + +LF K +W A T +I+ E + Sbjct: 2 RTVRIGFSTLSLFWKTPPEWAEAARTDGFGSIEILCEGPQWPRQADKDTIRESIAGSGID 61 Query: 66 ILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLA 124 + H + +N E++ + +G S L HPG + Sbjct: 62 LYLHSPTIDLNPASMNPGIREETLRQLRETADLAAAIGASCLTTHPGIVHKDKVRNVGVE 121 Query: 125 RIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCH 182 + + A ++ GVT IEN L E L+ GV ID H Sbjct: 122 FAKQVLGEAADYARSAGVTLSIENMPASKQYLCNTPEELSDFRAHCG----CGVTIDVGH 177 Query: 183 AFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHD 242 A AE ++ + +H+ND D+H GEG + Sbjct: 178 AIL-------CAEPQEFLR-------MPEISYLHVNDNMGE----RDQHLCPGEGILDLK 219 >UniRef50_Q39ZU4 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q39ZU4_PELCD Length = 257 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 27/253 (10%) Query: 33 TKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAF 91 + + ++ L + K A ++ + H ++ +N G E +R + Sbjct: 26 LQPELAFKWPDLDPSLLPAVKRAGQQLAEEGLGVTVHAPFMDLNPGAIEPLVREATRQRW 85 Query: 92 IDEMQRCEQLGLSLLNFHPGSHLMQISEED--CLARIAESINIALDKT--QGVTAVIENT 147 + ++ E L L+ HPG + + + + + L++ Q V+EN Sbjct: 86 MQTLEVAELLQARLVVLHPGFDRWRYGGQSQPWIDACLDFLPPLLEQAASQECLLVLENI 145 Query: 148 AGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTV 207 + + LAA++ ++ +G C D H ++L E+ F A Sbjct: 146 FEE------TPDTLAAVLKTLDSP-WLGHCFDAGH-----WNLFAKCSMEQWFEALA--- 190 Query: 208 GFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDI 267 ++R +H++D D H ++GEGNI M++ + + LE + + Sbjct: 191 --PWIRHLHIHDNSGD----RDAHLAIGEGNIDFPLLFDYMKNLQSSP-SMTLEIHDCEA 243 Query: 268 WAEEIAWLKAQQT 280 + +K+ Sbjct: 244 LLRCVGSVKSLLP 256 >UniRef50_Q6E690 DNA lyase/endonuclease 4 (Fragment) n=1 Tax=Antonospora locustae RepID=Q6E690_ANTLO Length = 194 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%) Query: 3 YIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 +GAH+S + G+ + + A A+F K+QR + + + + F+ Sbjct: 49 LVGAHLSISKGIHTVQEQMDMLKAHTCAMFLKSQRTYNFKKIKDEDVSRFREHVR----F 104 Query: 63 SAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 ILPH SYL+NL +P K D +D+++RC LG+ + N HPGS + ++ Sbjct: 105 PELILPHASYLVNLANP-EVMSGKGFDVLVDDLERCNLLGIKMYNIHPGSDVNKLGR-GA 162 Query: 123 LARIAESINIALDKTQGVTAVIENTAGQGSNL 154 L ++E++N L V ++EN AGQGS L Sbjct: 163 LELVSENLNRVLSIVPNVMVLLENMAGQGSVL 194 >UniRef50_Q315E0 AP endonuclease, family 2 n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315E0_DESDG Length = 278 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 83/262 (31%), Gaps = 36/262 (13%) Query: 23 EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVT 81 E+ A+ W A + H + ++ G Sbjct: 30 ELGMDTVAV-QDLPESWHIKT---------AALLREKGL---ACSVHLPFFDLHPGSLNN 76 Query: 82 EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE--EDCLARIAESINIALDKTQG 139 LE SR G LL HP Q ++ L R AE+ + Sbjct: 77 AVLEASRATLYRAAGLARLYGPCLLVGHPAYDRGQHPPRHDEWLRRSAETWRTVREHAAM 136 Query: 140 VTAVIENTAGQGSNLGFKFEHLAAIIDGV----EDKSRVGVCIDTCHAFAAGYDLRTPAE 195 +ENT E LAA+ID + + G+C D H F+ G R PA Sbjct: 137 APLRLENTHD------ISPEPLAALIDELTAKGGEDGGAGICFDAGHWFSFGRGSRDPAG 190 Query: 196 CEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDG 255 EK F +R MHL+D D+H LG G I ++ Sbjct: 191 LEKWLDVFGT-----RIRHMHLHDNDG----SDDQHLGLGSGRIPWSRIFAGLEQRGVRA 241 Query: 256 IPLILETINPDIWAEEIAWLKA 277 + LE + + + +L++ Sbjct: 242 -TVTLEPHSEKDFDTSMRFLQS 262 >UniRef50_A5UTA1 Xylose isomerase domain protein TIM barrel n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTA1_ROSS1 Length = 255 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 91/260 (35%), Gaps = 32/260 (12%) Query: 11 AGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHD 70 A + + A AA A L + AA L + E +A + ++ H Sbjct: 10 ARSILDEARWAAANGFEALDLTIEGP----AALLDSFDPAELRAILDAAGMR---VVGHT 62 Query: 71 SYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 ++ + PV + + + +G L+N H + +D L R S Sbjct: 63 AWYLPFASPVERVRRAAVEEVAASLPVFAAIGAHLVNVHISRGVSLYGNDDELKRNGASF 122 Query: 131 NIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 L + G+ V+E + + L I ++ R+G+ +D HAF AG Sbjct: 123 AELAHLAEPYGIQIVVE-------HPPSRRFGLTEICTILDADPRLGLHLDVGHAFVAGI 175 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 D +G L +H +D + + D H +G G I ++ Sbjct: 176 D----------LEQLIDRLGS-RLWHVHFSDNRG----QEDDHMPIGAGKIDWQETIRLL 220 Query: 249 QDDRFDGIPLILETINPDIW 268 + +D + + LE + D Sbjct: 221 KRGGYDDV-ITLEVFDQDHD 239 >UniRef50_B9CN09 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN09_9ACTN Length = 282 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP--HD 70 L AA++ A L+T + + T ++ + + P ++ Sbjct: 20 SLEAFFASAADLGFEAVELWTGPMHFFLDYA-SNDTPEKITRLANSFGLDVCALCPEQNN 78 Query: 71 SYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 N+ E++++++D F+ + +LG+ ++ PG + + R + Sbjct: 79 PKPANIAARGEESIKRTKDYFLRAINVASELGVGIVVVTPGWGFLDEERTEAWKRSVYML 138 Query: 131 NIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 +G+ +E + SNL + E L +ID V + + V +DT + A Sbjct: 139 GNLSSYAACKGIVLTVEALQPEESNLCNRCEDLRRLIDEVGSSA-LKVLLDTGAMWRA-- 195 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 +T D+ G +H + + S H + G+G +A + Sbjct: 196 --------HETMQDYFDAFGKD---VVHCHFTDAGTVS----HLAWGDGERNLEADLLAL 240 Query: 249 QDDRFDGIPLILETINPDIWAE 270 + + G L LE + +A+ Sbjct: 241 TRNDYKG-YLSLEIVGLQYYAD 261 >UniRef50_C0GFP7 Xylose isomerase domain protein TIM barrel n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFP7_9FIRM Length = 258 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 83/269 (30%), Gaps = 33/269 (12%) Query: 2 KYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY 61 +G + + + A+ LF + + + + + Sbjct: 1 MKVGFPNNPRKVIKDEIKWIADNGFDFIDLFLE-------PDKSELGKFNVREIKSQLDF 53 Query: 62 TSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEED 121 + + H ++ + +G +E + + + +G + H SE++ Sbjct: 54 YGLERVGHAAWYLPIGSSFSELRTCAVEIVNRYLDVFANVGCDFVTIHSNWPTSLFSEDE 113 Query: 122 CLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + ESI L GV ++E LG +H I + ++ D Sbjct: 114 GVKFQTESIQSILSYASKAGVKIMLEP-------LGTIHDHAGNIDRILALNDQLYFHAD 166 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 H G D + + L +HL+D S D H +G GNI Sbjct: 167 IGHLNLYGRD------PVEYLLRY-----KDKLMHIHLHDN----NSIDDLHLPIGTGNI 211 Query: 240 GHDAFRWIMQDDRFDGIPLILETINPDIW 268 D +++ F + LE + D Sbjct: 212 DWDNLINVLKS--FYDGTVTLEIFSEDKD 238 >UniRef50_B5YFP0 AP endonuclease, family 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFP0_THEYD Length = 252 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 79/230 (34%), Gaps = 29/230 (12%) Query: 54 AACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 +K + + H ++ ++ G + E + + F L + FH G Sbjct: 45 EKLKKAFFNETSLSFHAPFMDLSPGAIDSRVREVTIERFNQIFDIATLLNPKSIVFHSGY 104 Query: 113 HLMQISE--EDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 + + + L ++ L + + + IEN + E L +++ + Sbjct: 105 EKWKYAFKVDIWLEASLKTWERILPRAEQLKIKIAIENIFEEE------PESLRMLVEKI 158 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 G+C DT H ++L + E+ Y+ +HL+D F Sbjct: 159 SSPY-FGICFDTGH-----FNLFSKKSIEEWMFCLN-----DYIVEIHLHDNNKNF---- 203 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H ++G G + F + ++ +E +P+ + + L Sbjct: 204 DEHLAIGSGCFDFEKFFELFKNK---NCIYTIEAHSPENVFKSLKMLDKL 250 >UniRef50_A8TFI1 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8TFI1_METVO Length = 254 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 30/225 (13%) Query: 64 AQILPHDSY-LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 + H +NL + + + ++ + ++ HPG ++ Sbjct: 52 LKYTIHCPLEDMNLASKYENLRKVNVNIIEQLVKIADNTNAKVIVLHPGYNVFDSMRPKA 111 Query: 123 LARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180 + +++ L + V IEN L + ++ ++ +G+ D Sbjct: 112 VESFLKTVEDMNKLQQEHSVQLTIENMPNYDMMLFKTPD-----MNVIDSFGDIGITFDM 166 Query: 181 CHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG 240 H++ ++ + F ++ +H++D F D H +LG+G I Sbjct: 167 GHSYLNN-------NIDEFLRE---KKVFNRIKHVHIHDNNGDF----DEHLNLGDGKIP 212 Query: 241 HDAFRWIMQDDRFDGIPLILET-----INPDIWAEEIAWLKAQQT 280 + ++ ++D ++E N + + ++ LK + Sbjct: 213 FENYKKALKD---LNCIKMVEVQSRRLNNIEEIDKSVSELKKLLS 254 >UniRef50_A3CUM4 Xylose isomerase domain protein TIM barrel n=5 Tax=Methanomicrobiales RepID=A3CUM4_METMJ Length = 243 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 69/230 (30%), Gaps = 33/230 (14%) Query: 52 FKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP 110 + + E S + H +N+ + S + ++G + HP Sbjct: 37 YLKSAESLESYSYRYFIHAPARGVNIASLLEPIRRASVEVLAQAFAVAAEVGAD-VVIHP 95 Query: 111 GSHLMQISEEDCLARIAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 G + E R +S++ + VT +EN + L I Sbjct: 96 GYYAWSEERERAAERFRQSLSELTAAAEDLSVTFFVENMGNWEYFFLRTCDDLPLI---- 151 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 +G+ +D HA G F HL+D Sbjct: 152 ---DGIGLALDVGHANLNG-----------CLDCFLAH----PAAHFHLHDNDG----TG 189 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H +G+G I A +M+ R G I+E + I+ L+ Sbjct: 190 DTHSPVGDGTIDFSA---VMKAVRRSGAVPIVEVDTLEGVTASISALEGI 236 >UniRef50_UPI0001C41B6B xylose isomerase-like TIM barrel domain-containing protein n=2 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B6B Length = 257 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 28/230 (12%) Query: 54 AACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG- 111 + + + H ++ +N+ + + S + + + ++ HPG Sbjct: 47 ELIDLINSYDLKYTIHSPFIDLNIASLNSALAKLSVEEIKRSIDLANMIDSDIVVAHPGF 106 Query: 112 -SHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 S + E+ E + D + GV A IEN + L + + Sbjct: 107 VSFNGRGKEDIIYEIGREGLVEIGDYAKDNGVNACIENLPKIEGFMYQDVNQLNDTLVEL 166 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 E + +D HA AG+ + F ++ +H++D Sbjct: 167 ELP----MTLDIGHAHTAGFSP--------------DEIYFDSVKHIHVHDNPGD----D 204 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H +LG+G + F + + +DGI +LE + D + + ++K Sbjct: 205 DTHLALGDGTFDVNGFFDVFTKNGYDGI-YMLELNHIDFIQKTLDYMKNL 253 >UniRef50_A3CX04 Xylose isomerase domain protein TIM barrel n=2 Tax=Methanomicrobiales RepID=A3CX04_METMJ Length = 274 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 30/255 (11%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL- 73 + AE + + W + C H + I H L Sbjct: 17 DHIFDYVAESGLDGLEFWVETPHFWLRDRPEDE-----LGRCIADHPELSPITVHAPSLD 71 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC-LARIAESINI 132 +N E S D ++ ++ E++G +++ HPG + R + I Sbjct: 72 LNPCSINPRVAEISVDYALEAVRMAERMGAAVVTVHPGKRTAKRHPSAYDYRRFEDYIAR 131 Query: 133 ALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 + +G V IEN + + L E A ++D + + +D HA + Sbjct: 132 LREAAEGTRVKVAIENMEPRVNTLLSTAEDAAEVLDR---EPWLWFTLDMGHAM-----M 183 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ- 249 + E + + + + +H++ G HH + + +A + + + Sbjct: 184 TSCDEVIRFID-----LCIERMVNVHVS----ALGGNGRPHHPIHD---DPEALQVLAEL 231 Query: 250 DDRFDGIPLILETIN 264 DR G L LE + Sbjct: 232 ADRGYGGYLTLELED 246 >UniRef50_B8H746 Xylose isomerase domain protein TIM barrel n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H746_ARTCA Length = 270 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 89/262 (33%), Gaps = 26/262 (9%) Query: 16 NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN 75 +A A AF + + W +T Q +A + Y + Y IN Sbjct: 16 DAIAELAANGYQAFEVPVSSPHCW-PDEITAQERSAMRARLKDYGAKIRSLNAGG-YDIN 73 Query: 76 LGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISE--EDCLARIAESINIA 133 L P KS + + E + + PG+ IS ++ A + ES+ Sbjct: 74 LASPGANMRRKSVEHIKQVIDLAEAWDVREVVISPGTRRPMISPALDNVYAWMYESLETL 133 Query: 134 L--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 + K G + ENT + LA +I + D V + D +A G Sbjct: 134 IPMAKQAGTRLLFENTP---YCFTPTIQDLAGVISTIND-DAVKIVYDVANAAYIG---- 185 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDD 251 + ++G +H++D G+ H +G G I + +++ Sbjct: 186 --EDPVDGLLAHHESIGL-----IHISDT----GTETWGHDPIGTGIIDWNGLGKAVRET 234 Query: 252 RFDGIPLILETINPDIWAEEIA 273 G ++LE I + +E Sbjct: 235 CGIG-NVVLEIIREENPVQEFK 255 >UniRef50_Q2FTK0 Xylose isomerase-like TIM barrel n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTK0_METHJ Length = 281 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 93/274 (33%), Gaps = 36/274 (13%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 L + + A + + W L +DE K T + + H Sbjct: 14 PLEDIFRSPEQSGADCLEFWLETPDFW----LKGLCLDEL-KRQVKASPTRSPLSVHAPV 68 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE----DCLARIA 127 L +N + E S ++ EQ+ S+ HPG + L + Sbjct: 69 LDLNPCSINPDVREVSIRWIERSIELAEQIEASVCTIHPGRRTAKRPPSITDYQRLGFML 128 Query: 128 ESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 + I D+ + V IEN + L + II ++++S + D HA +G Sbjct: 129 DRIERIADEVR-VKIAIENMEPAVNALLTTPDE---IIKVLDERSWLYFTFDYAHAVGSG 184 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 + + F G + +H++ A + H + F Sbjct: 185 ---------PQVVSSFLDG-GAGKIVNIHISGAGNGQ-----MHGPVSSDE-NATPFLRE 228 Query: 248 MQDDRFDGIPLILET-----INPDIWAEEIAWLK 276 ++D+R+DG + LE + + E+I+ LK Sbjct: 229 LRDNRYDG-QITLEINDLVLPSALSYQEKISLLK 261 >UniRef50_UPI0001C41E27 xylose isomerase-like TIM barrel domain-containing protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E27 Length = 252 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 42/273 (15%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHD-SY 72 + A E + L + + E K E +H I H + Sbjct: 15 VDEMLEIAVENGFDSVELLAEGP-------YRQDILLERKEITETFHSYDLDIYIHGVNV 67 Query: 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESI 130 INL ++S + + +++G + HPG + E L + ES Sbjct: 68 DINLASLNEGIRKESVKQTKECLDLADEIGAIGVTAHPGKIGRPEKYLREMALGFLTEST 127 Query: 131 NIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 + + + IEN + S LG + L + + +++ + ID H Sbjct: 128 HELVAYAEDKEAKISIENMPERFSYLGNRAYEL----ENLTNETGCNITIDLGH------ 177 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 + T + F + H+ND D+H ++G+G + + +++ Sbjct: 178 -VNTCKDQLSFFE-------IPNILYYHINDNDG----IKDKHQAIGDGTLDLNLLKYVD 225 Query: 249 QDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 I+E N D + ++ + Sbjct: 226 NG--------IIELNNFDNVLKSKKVIEDFLAK 250 >UniRef50_A5G934 Xylose isomerase domain protein TIM barrel n=9 Tax=Desulfuromonadales RepID=A5G934_GEOUR Length = 257 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 87/246 (35%), Gaps = 27/246 (10%) Query: 38 QWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQ 96 + L ++ A E + H ++ +N G V + + + +F D + Sbjct: 31 FFSGDALDAVIPEQLAAEAEALAANGLKCTIHAPFMDLNPGSVVRQIRDITLQSFNDVLD 90 Query: 97 RCEQLGLSLLNFHPGSHLMQI--SEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGS 152 L ++ FHPG + +++ L +S L++ + G +EN + Sbjct: 91 AAAILRPEVIVFHPGYDRWRYGDNKDAWLQYSIDSWQSVLERAERIGCIVAVENIFEEE- 149 Query: 153 NLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYL 212 L A+++ V+ R C D H ++L E+ FA Y+ Sbjct: 150 -----PSTLQALLEAVDSP-RFRHCFDVGH-----WNLFRKVGLEEWFATLG-----NYI 193 Query: 213 RGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEI 272 H++D D H LGEGNI F +M+ +E + + + Sbjct: 194 AETHIHDNFGL----RDEHAPLGEGNIDFPLFFTLMERYA-PQAAWTIEAHSREKLERAL 248 Query: 273 AWLKAQ 278 L+ Sbjct: 249 HNLQKY 254 >UniRef50_P0C9C6 Probable AP endonuclease n=8 Tax=African swine fever virus RepID=APE_ASFP4 Length = 296 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 31/266 (11%) Query: 9 SAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP 68 S A + A + +F R+ + E K++ ++ Sbjct: 24 SIANYV--AFGEQIGFPFKSAQVFIAGPRK-AVINIQEDDKVELLKMIVKHNLW---VVA 77 Query: 69 HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 H +YL + E+ C+++G+ L H G+ I E Sbjct: 78 HGTYLDVPWSRRSA---FVTHFIQQELLICKEVGIKGLVLHLGAVEP--------ELIVE 126 Query: 129 SINIALDKTQGVTAVIENTAGQGSNL-GFKFEHLAAIIDGVEDK--SRVGVCIDTCHAFA 185 + +GV +E + E + + + + ++G+CIDT H ++ Sbjct: 127 GLKKI-KPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWS 185 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGM--HLNDAKSTFGSRVDRHHSLGEGNIG--- 240 +G ++ + + + + HLNDA + GS +DRH SL EG I Sbjct: 186 SGVNISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSY 245 Query: 241 -----HDAFRWIMQDDRFDGIPLILE 261 ++ P ILE Sbjct: 246 SHKIKQSGLYCFVEYITRHQCPAILE 271 >UniRef50_A7I9J6 Xylose isomerase domain protein TIM barrel n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I9J6_METB6 Length = 275 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 91/281 (32%), Gaps = 47/281 (16%) Query: 4 IGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 I +HVS A + + W + T + AC + H Sbjct: 19 IFSHVSRA-------------GLDGIEYWLETPYFWLSRLPTGEVA-----ACRQAHPEI 60 Query: 64 AQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDC 122 A H L +N + E S + + +LG LL HPG + D Sbjct: 61 ATFTVHTPVLDLNPCSINPDVAEVSVAWAVRSLALARELGAGLLTVHPGRRTAKRPPGDA 120 Query: 123 LARIAESINIALDKT---QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCID 179 + L + VT +EN + L E + ++D + + +D Sbjct: 121 DQIRFDHYLAVLKEAARKSTVTVAMENMEPAVNALICTPERMREVLDA---EPWLKFTLD 177 Query: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI 239 T HA + E+T +++ G L +HL+ + H L E + Sbjct: 178 TSHALVSS---------EETVSEYIDLCG-DRLANVHLS-----RAAGGRLHLPLEESPV 222 Query: 240 GHDAFRWIMQDDRFDGIPLILET-----INPDIWAEEIAWL 275 ++D + G PL+LE P E+ A L Sbjct: 223 -MARILGFLRDHHYLG-PLMLEIDDLNFPRPFSHEEKCAVL 261 >UniRef50_Q2LSS8 Endonuclease IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS8_SYNAS Length = 264 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 92/290 (31%), Gaps = 46/290 (15%) Query: 1 MKYIGAHVSAA----GGLANAAIRAA--EIDATAFALFTKNQRQWRAAPLTTQTIDEFKA 54 +KY+ HV G L + EI A L D F+ Sbjct: 5 LKYLQVHVPFRMLEGGFLDTVIAKGISPEIGFDC-------------AILDATGKDRFRE 51 Query: 55 ACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG-- 111 +++ ++ H ++ + G E SR+ + HP Sbjct: 52 VADRFSDAGLRVTFHAPFMDLRPGAIDPRIREVSRERIQQVFDLVPLFRPRTIVCHPSFD 111 Query: 112 SHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 S SE L + + +++ ++EN + +F HL +D + Sbjct: 112 SRYYVSSERKWLENSTLTWSTFVEQAAEFDTLLLLENVYEKEP---RQFVHLLTALDSL- 167 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD 229 RV C+DT H A + A + +G +HL+D D Sbjct: 168 ---RVRFCLDTGHCNAF-----SDAPLSSWLEELGTFLGE-----VHLHDNDG----SRD 210 Query: 230 RHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQ 279 H +GEGN ++ I L LE + D + + L+ + Sbjct: 211 AHLPIGEGNFPFMELFGFLKTKVNRPI-LTLEAHSADHLSRTLETLRKNR 259 >UniRef50_B0MII0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MII0_9FIRM Length = 281 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 83/248 (33%), Gaps = 22/248 (8%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP--HDSYLIN 75 AAE + L+T + T + K Y + + P + Sbjct: 25 LRAAAESGYESIDLWTCGAHYFVD-AHTHEETKSLKRMLGDYGLKAVSMTPEQSCPKPFH 83 Query: 76 LGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIAL- 134 + E +K++ F ++ +L + G E+ R E + Sbjct: 84 MAAKRPEIRKKAKRYFQHMIRAASELDCDRVLITSGWQFFSEDREEAWKRSEEMVGELCR 143 Query: 135 -DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTP 193 + GV +E + + + L + E + +++ V + + V D AG Sbjct: 144 FSEDYGVYLTMETLSKKSTRLCNRLEDVKRMMEAV-NSGQFAVTADIHTIHNAG------ 196 Query: 194 AECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRF 253 ++ D+ G K L +H D + S H G+G + ++ + + Sbjct: 197 ----ESLQDWFDAFG-KRLNLVHFMDYRDGAFS----HLKWGDGTCDLEGTLKLLDQNDY 247 Query: 254 DGIPLILE 261 G PL+LE Sbjct: 248 RG-PLVLE 254 >UniRef50_C0D4C4 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4C4_9CLOT Length = 289 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 35/286 (12%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 + ++ + L K K + + Sbjct: 17 SFDYFLESMKRLGVDQIEVWAAGPHFY----LDDFDYFRMKEFAGKVQRAGMKAVCLTPE 72 Query: 72 ---YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 Y +++ +S + F + E L + PG ++ S E +A + Sbjct: 73 QCQYPVSISVEDPVMRRRSLNYFKKAIDAAELLECPKVLVTPGRSMLDYSRETGVALCID 132 Query: 129 SINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 S+N + + VT V+E A + + + E L ++DG + + +DT Sbjct: 133 SLNRLAEYAIRRNVTLVLEALARTTTFIAHRPEELKVLLDGAGNPPNLVPMLDT------ 186 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRW 246 D DF R G L +H D H G+G + + + Sbjct: 187 --DGAAREGLRP--RDFFRLFGKT-LAHIHFTDGYPGG------HVVPGQGRLDMNGYLE 235 Query: 247 IMQDDRFDGIPLILETINPDIWAE-------EIAWLKAQQTEKAVA 285 + F G + LE ++ + E + + + + ++ Sbjct: 236 EIDSAGFQG-YIALELLDRQYYLEPEQAVKASLEFFRRYEHNSKLS 280 >UniRef50_A0LJR2 Xylose isomerase domain protein TIM barrel n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJR2_SYNFM Length = 287 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 91/290 (31%), Gaps = 40/290 (13%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 + A R A I + + L + + KA + +A + + + Sbjct: 15 SVCEAVERIAAIGFDGVEVLADVPHLFAGRRLDPE-LAGLKAVLRRSGIRAANVNANTAV 73 Query: 72 -----------YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 + +L +P +A + + ++ +L ++ G + Sbjct: 74 GYYGGCFWEPLFEPSLANPDPDARKWRIEYSKRCVEIAHELECPNVSVTSGRMVPGTLPS 133 Query: 121 DCLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 + L + +S+ L + GV +E G + E L +D G + Sbjct: 134 ESLELLKDSLEAVLRCGEAHGVRIGMEYEPGLLVERCGELEALMRALD----SPWFGANL 189 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 D H+ G + +F + +H+ D R H G G Sbjct: 190 DLGHSHVLGEEP-----------EFVVRSLGARIFHVHIED----IARRKHYHLIPGLGE 234 Query: 239 IGHDAFRWIMQDDRFDGIPLILETIN-----PDIWAEEIAWLKAQQTEKA 283 + A I+ D+R+DG + +E + +A L+ EK Sbjct: 235 VDFAALFRILDDNRYDGF-ITVELYTYPHQPEEAATRSLAHLRPLIHEKP 283 >UniRef50_Q0W0Q9 Putative endonuclease IV n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W0Q9_UNCMA Length = 265 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 28/279 (10%) Query: 1 MKYIGA----HVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 M IG H + G E+ A + + R +T ++ Sbjct: 1 MIRIGIAGIPHGAKGKGTEAGIRYLRELGLDAMEI-----QFGRNVYMTPESAKSVAPVA 55 Query: 57 EKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQ 116 + + H Y +NL + +EKS+D I + G S++ H + Sbjct: 56 MEERVE---LSVHAPYYVNLSSKTEKTIEKSKDWIIKSARVAAAAGASMVTVH---AARE 109 Query: 117 ISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + + +A E ++ + V +E G + + ++ V S + Sbjct: 110 ENPDLVIAGFREIVSALAKEHISVPLGLETMGDLGEF--GSVDDVLEVVRKVPGTS---I 164 Query: 177 CIDTCHAFA-AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSL 234 ID H +A L++ + A++ + H++ + + + RH L Sbjct: 165 VIDFAHIYARTDGGLKSVEDFSAVLDRVAKSG----INHYHIHFSGIEHKNCREIRHLPL 220 Query: 235 GEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 +G + + + D +I E+ + A ++ Sbjct: 221 -DGKPDFSLLAKALVECKIDA-TVICESPLLEEDALKMK 257 >UniRef50_B1L7I1 Xylose isomerase domain protein TIM barrel n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7I1_KORCO Length = 282 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 87/258 (33%), Gaps = 30/258 (11%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 L + +I L + W + + IDE K A E ++ A +L H Y Sbjct: 24 LMSEVRSILDIGMDFVELTVEWPLSWVDSV--ERRIDELKDAVESHN---AFLLVHSPYY 78 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS-EEDCLARIAESINI 132 + + HP E + + ++ +L + FHP + S +E Sbjct: 79 LEIAHPYEEVRRGALKEALKILEVSRKLESTSATFHPFTPGWLASIKEKARELNVVGFRE 138 Query: 133 ALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDL 190 + + GV ++EN + ++D V+ + + +D H+ G Sbjct: 139 LVKHGRELGVQILVENVDHGAF---RSPPDIRYLLDHVDG---LLMTLDVGHSVINGG-- 190 Query: 191 RTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQD 250 + + + G + + MH++D D H +G G I + + Sbjct: 191 ------LEKLKSYLKKCGKE-IVHMHIHDNDM----SSDLHLPIGAGRIPWPEVLGEISN 239 Query: 251 DRFDGIPLILETINPDIW 268 R + LE + D Sbjct: 240 YR---GTVTLEVHSSDPD 254 >UniRef50_C6C274 Xylose isomerase domain protein TIM barrel n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C274_DESAD Length = 269 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 24/234 (10%) Query: 49 IDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLN 107 +D + ++ + H +L + S D + + + + Sbjct: 48 MDWLMSVRDRLEEAELKCTVHLPFLDLKPSSLNPAIRNASIDTLLTAFELAKFFSPQRMV 107 Query: 108 FHPG--SHLMQISEEDCLARIAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAI 164 HP S L E E I +ENT + + + Sbjct: 108 LHPSFTSWLEPPLFERSYTNCVEGIRRLSNSWPDHPPLCLENTYEF------TPDAITRL 161 Query: 165 IDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF 224 + + D+ +G+C D H F+ + + F FA Y++ +HL+D Sbjct: 162 VTDL-DRDNIGICFDLGHWFSFSKGAEN-DDFDVWFNAFA-----PYIKHVHLHDNHG-- 212 Query: 225 GSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIP-LILETINPDIWAEEIAWLKA 277 D H +LG G++ D I + D +P LE N + + ++ + Sbjct: 213 --SKDEHLALGRGSMNWDYI--ISRIGEIDPLPTFTLEPHNREDFDVTYSYFRE 262 >UniRef50_C9L713 AP endonuclease, family 2 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L713_RUMHA Length = 261 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 78/219 (35%), Gaps = 28/219 (12%) Query: 47 QTIDEFKAACEKY-----HYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQ 100 + +D F Y ++L H +L +N + + + Q + Sbjct: 33 ENLDNFSKTLLSYEKRLGKMGCEKLLLHGPFLDLNPVSYDLSIRNVTMKRYEEAYQAAKA 92 Query: 101 LGLSLLNFHPGSHLMQISEEDCLARIAESINI-ALDKTQGVTAVIENTAGQGSNLGFKFE 159 LG + +H R+AE +K + V+EN L + Sbjct: 93 LGAKKIVYHTCYVPDFYLLIGWAERMAEFYKEFLYNKDNSIEIVMENV------LDRIPQ 146 Query: 160 HLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLND 219 +A + + E + G+C+D HA + C++ F KYL+ HL+D Sbjct: 147 PMAEVAEKTEHPA-FGLCLDVGHANCY-----SKVPCKEWFQT-----EKKYLKHSHLHD 195 Query: 220 AKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPL 258 K D H LG G + D R I+++ + D + Sbjct: 196 NKGD----RDSHLPLGTGTVCRDTVREILREKQVDTCTI 230 >UniRef50_A7I6Z5 Xylose isomerase domain protein TIM barrel n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I6Z5_METB6 Length = 253 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 71/241 (29%), Gaps = 35/241 (14%) Query: 47 QTIDEFKAACEKYHYTSAQILPHDS-YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSL 105 + + AC H INL D C+ + Sbjct: 41 HDLFRYHEACASVDAR---YSVHAPLSDINLASTNDRIRTAGLAVIDDLCSICDAIRAET 97 Query: 106 LNFHPGSHLMQISEEDCLARIAESIN--IALDKTQGVTAVIENTAGQGSNLGFKFEHLAA 163 L HPG + A + S++ L K V IEN + + L Sbjct: 98 LVVHPGYFPWENMFGISYAALMHSLDDIAVLQKKHEVRIGIENMGSWECLHFRQPDLLPE 157 Query: 164 IIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 + ++ +G +D HA G +HL+D Sbjct: 158 L-----ERRDIGFVLDIGHARLN--------------HALCMFAGKSRPCHIHLHDN--- 195 Query: 224 FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKA 283 G D H + G G I ++ I+E ++P + + +A+L Q E A Sbjct: 196 -GGTNDDHAACGSGTIDFARLLPLLPASASR----IIECMDPRAYEKSVAYL--LQAEAA 248 Query: 284 V 284 + Sbjct: 249 I 249 >UniRef50_A2ST89 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST89_METLZ Length = 242 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 64/232 (27%), Gaps = 32/232 (13%) Query: 50 DEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNF 108 + H N+ + S + + + +G L Sbjct: 38 HSLFRHASVLDKFDLRYTIHAPTADGNIAESFEPIRKASIAVIKETAEIADLVGAKKLVI 97 Query: 109 HPGSHLMQISEEDCLARIAESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIID 166 HPG L + ++ + SI D + V V+EN E + + Sbjct: 98 HPGFCLDPTCRKASVSALHRSIQELGDLQEEFSVRFVMENLGSMDCCFFQNTELIQDLRA 157 Query: 167 GVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS 226 +G+ +D HA G T F + + HL+D K Sbjct: 158 A-----GLGLALDVGHANLTG-----------TLDAFLK----EKPDHFHLHDNKGMC-- 195 Query: 227 RVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D H + G G + LILE + + +L + Sbjct: 196 --DEHAACGTGIVDFGKIL-----PEIGDATLILEVLKLKDVKPSLEYLTSL 240 >UniRef50_C0CGT0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGT0_9FIRM Length = 258 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 36/280 (12%) Query: 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY- 59 M YI +S + LA R + + + Sbjct: 4 MIYISNLISDSQ-LAELLAR-ENLGIETIDFSIGENL---------DDLSRLIDLWRRRM 52 Query: 60 -HYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 + H +L +N + + + + F + +G + FH + Sbjct: 53 DSMHCTHVSIHGPFLDLNPTSYDSYIYQATWNRFSQAYRAAMAIGADKIVFHTCRIPLVN 112 Query: 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 + R+A + L+ + +EN + L ++ VE C Sbjct: 113 YSQGWAERMANFWSKFLENHSQLPICLENVFDD------NPKLLKQVLKLVEHP-HFTFC 165 Query: 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 +D HA ++ +G Y +H++D D H ++G+G Sbjct: 166 LDAAHAHCFS---------SVPITEWVDVLG-PYTSHVHVHDNLGD----RDAHLAVGDG 211 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 N+ + Q+ +E + + +LK Sbjct: 212 NLPWEDLITHFQNMS-QPPTWTIENTSLKDIRISLDFLKK 250 >UniRef50_Q2BFE3 Predicted endonuclease n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFE3_9BACI Length = 283 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 99/292 (33%), Gaps = 36/292 (12%) Query: 1 MKYIGAHVSAAGGLANAAIRAA-EIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY 59 MK G +++ + +D L+ + L ++ + Sbjct: 1 MKLAGMNITFRHYPFKEFLECMTNLDIRHLELWAGEPHFYVYRNLPGH----LRSMKREL 56 Query: 60 HYTSAQILPHDS----YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM 115 + +++ Y N+ ++ S + F D + +L +++ G Sbjct: 57 KSRNMELVCFTPEQCVYPYNIAASDSDWRRSSVEYFKDNLYAALELDCNMMLITSGIGDH 116 Query: 116 QISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 +S + A+SI+ + + +G+ V+E +NL E + +++ + S Sbjct: 117 SVSTGESWKYAADSIHQLAKIAEKEGMNLVLEPLTRFETNLVMDVEGVKRMLEDIRSSSL 176 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 G+ IDT AG T + T D ++ HL D D H + Sbjct: 177 TGM-IDTVAMQLAG---ETLEDYFSTLRD---------VKHFHLIDGDGLS----DAHLA 219 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWA-------EEIAWLKAQ 278 L +G + + ++ + G LE + D + E + L+ Sbjct: 220 LDDGVLDWRGYMESLRCSGYKG-ACTLEIMGSDFYKNPKEIISESVKKLREM 270 >UniRef50_A5IJZ8 Xylose isomerase domain protein TIM barrel n=4 Tax=Thermotogaceae RepID=A5IJZ8_THEP1 Length = 304 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 99/300 (33%), Gaps = 49/300 (16%) Query: 1 MKY-IGAHVSAA---GGLANAAIRA---AEIDATAFALFTKNQRQWRAAPLTTQTIDEFK 53 M IG +V G + I + + + ++ K Sbjct: 1 MIKGIGTNVDTRRVNGSIKRLVSELEFFKSIGFDYVEIPAAGLDVIARGRIIRKRLERVK 60 Query: 54 AACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 Y++ H +INL ++ ++ ++ +H G Sbjct: 61 ELLSNYNFR---YTVHAPDVINLKIKTNPWH---YQVMEATIEFAGEINAEVVVYHYGEV 114 Query: 114 LMQISEEDCLARIAE--SINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 I + + R E ++ L K +GV +EN +G + ++ V Sbjct: 115 DHSIDVPERVQRKTEIVALRELADLAKEKGVVIGVEN-------VGHPVSEVLKLVRAVN 167 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST------ 223 V + ID H F + + + + + G Y +HL+D Sbjct: 168 HP-NVKLVIDVGHLF-----IVSNYTGIDFYDELKK--GLPYAVELHLSDNFGESPQTYQ 219 Query: 224 ----------FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 D H +GEG+I ++ I+++ FDGI +ILE + D +A+E A Sbjct: 220 KIPDVEAFRFVYGIGDLHLPIGEGDIPYNKVFRIIRESGFDGI-VILEINSMDRFADEYA 278 >UniRef50_A8RXQ0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RXQ0_9CLOT Length = 278 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 29/250 (11%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 L AA L+ + +T + + E+ ++ + Sbjct: 20 PLEKFLDDAARAGVEHVELWGAAPH-FHLEDMTYTDVCRVRKQIEERGL---SLVCYTPE 75 Query: 72 ---YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS-HLMQISEEDCLARIA 127 Y +NL T +S F D ++ +LG + G +L + + Sbjct: 76 QCIYPVNLAADSTVQRRRSLKYFEDNLRAAAELGTDKMLVTTGWGYLDNSNINEAWKYAR 135 Query: 128 ESINIALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 E + D + G+ +E SNL + L +++ + + +G IDT Sbjct: 136 EGLMSLGDMARDYGIKLALEVLRRDESNLVYNLPTLKRMMEDLSHPA-IGAMIDTIPMAL 194 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR 245 AG P + K F + + +H++ H + G+G + + Sbjct: 195 AG---ERPEDYLKVFGE----------QLVHVHFIDGAP----RGHLAWGDGVLDMKGYL 237 Query: 246 WIMQDDRFDG 255 + G Sbjct: 238 EEFSRYSYKG 247 >UniRef50_A8RGW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RGW7_9CLOT Length = 276 Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 26/248 (10%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS-- 71 L A + + L+ L + +I Sbjct: 18 LDYFLDSANRLGFQSVELWASGPHL----HLEDFDGGRLRELNRTIKDHHLKIACFTPEQ 73 Query: 72 --YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAES 129 Y I++ HP +++ D F ++ L S + G + + ED A+S Sbjct: 74 CVYPISVSHPDKRYRDRTVDFFQRHIEAAVCLDCSCMVVSTGFAYLDVDGEDAFKWTADS 133 Query: 130 INIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 +++GVT +E +++ + L ++ V + G+ DT G Sbjct: 134 FFQICRKAESEGVTLALEPFTKYTTHICNEASQLLRLLRTVGSPALKGLG-DTDVIATTG 192 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 D TF F +G + L +H D H G+GN+ D Sbjct: 193 VD---------TFETFIGILGRENLAHVHFVDGNPGG------HLVPGDGNLNLDQALHT 237 Query: 248 MQDDRFDG 255 ++ + G Sbjct: 238 LEAFDYKG 245 >UniRef50_A6UKP5 Xylose isomerase domain protein TIM barrel n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UKP5_SINMW Length = 279 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 86/247 (34%), Gaps = 27/247 (10%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS--- 71 + + L+ + + +T+ + +A K I+ Sbjct: 21 DRFLADVCDAGVSRIELWAAAPHFY----IGDKTLADARALGRKVRGMGLNIVAFTPEQC 76 Query: 72 -YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 Y IN+ E ++S F++ M+ + G L G E L R +S+ Sbjct: 77 IYPINISAREPELRDRSLRYFLESMEFATECGAPALLVTAGGGYRDEPTEQALERCVDSM 136 Query: 131 NIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 I D+ Q G+ +E+ +N+ + ++D ++ A A Y Sbjct: 137 GILCDRAQKLGIHLWMESLPDSFANIISSAREIRELMDKLKSP-----------ALHAVY 185 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 D+ +T D+ + + +H D+ + GS H + G+G I D + Sbjct: 186 DVAGAVMTHETPEDYFTQL-AGRVAHVHFTDSDAG-GS----HLAWGDGVIDLDKLVAYL 239 Query: 249 QDDRFDG 255 + ++G Sbjct: 240 RSQNYEG 246 >UniRef50_A4XGK0 Xylose isomerase domain protein TIM barrel n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XGK0_CALS8 Length = 278 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 37/281 (13%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP---H 69 L R + I + W L+ + + K E + + +LP Sbjct: 21 PLEEVIKRLSRIGYDGIEIGCAAPHAW-PYYLSEEKRMKIKKILEANNIKVSSMLPAPGG 79 Query: 70 DSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAES 129 N P+ E + + + D + + G + + G + S +D ES Sbjct: 80 GP-GANPASPIEEERKWTVQHYKDVIDLASEWGAPTIIYVAGWVIYGTSRKDAWKYSLES 138 Query: 130 INIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAG 187 + K++ +T +E T+ SNL + +++ V V DT H Sbjct: 139 LIEIAEYAKSKNITVCVEPTSAD-SNLVETADDALLMMEQTGLP-NVKVMFDTFHVL--- 193 Query: 188 YDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWI 247 Y P++ L+ +H++D + G+G + Sbjct: 194 YRNEVPSDYIYKMGK--------NLKHIHISDHNR---------LAPGQGGMDFLPVLQA 236 Query: 248 MQDDRFDGIPLILE------TINPDIWAE-EIAWLKAQQTE 281 ++D +DG + +E +++PD A + +LK + + Sbjct: 237 LKDVGYDG-YVTMEVGFNSRSVHPDSIARYSLEYLKNLEKQ 276 >UniRef50_Q0FNT8 AP endonuclease, family 2 n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FNT8_9RHOB Length = 276 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 74/250 (29%), Gaps = 28/250 (11%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS 71 L AA + L+ L + E + + Sbjct: 19 HSLTRFLDDAAALGFARIELWAGMPHL----SLDDASATELRDVRRMIAARDLSLSCFTP 74 Query: 72 ----YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIA 127 Y INL +S D F + L L G D R Sbjct: 75 EQCVYPINLASEHPGTARRSFDYFRRALHGAASLDCRQLLVTAGWGYADAPASDAWERAR 134 Query: 128 ESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFA 185 + + D+ +GVT ++E + SNL LA ++ + + +D A Sbjct: 135 DQLGALADEAAREGVTLLLEPLSRTESNLITTSAELARMMAELASPQVAAI-LDLNAMAA 193 Query: 186 AGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFR 245 AG TPA+ F LR +H+ D H + G+G++ + Sbjct: 194 AG---ETPADYLARFG--------DALRHVHVCDGTPEG------HLAWGDGSLPLAQYV 236 Query: 246 WIMQDDRFDG 255 ++ + G Sbjct: 237 AELEAAGYQG 246 >UniRef50_B0AAE1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAE1_9CLOT Length = 263 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 83/244 (34%), Gaps = 32/244 (13%) Query: 41 AAPLTTQTIDEFKAACEKYH---YTSAQILPHDSY--LINLGHPVTEALEKSRDAFIDEM 95 A+P DEF ++ Y + H Y LI G + + Sbjct: 31 ASPYCLDRQDEFIENYKRELGDLYGKINLGIHGPYADLI-PGARDELITKATNYRMQQAY 89 Query: 96 QRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSN 153 +++ + + +H G + S + + R N + + IEN + Sbjct: 90 NVAKKMDANFVVYHNGYYPKTYSYIEWMQRTPIYWNDFKEGKEDDDIKIHIENVHEEDYF 149 Query: 154 LGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLR 213 L L +++ + + VC+D H A + A+ + + KY++ Sbjct: 150 L------LNELMEEI-HDEKTSVCLDVGHVNAY-----SKADVMEWMK-----ILKKYIK 192 Query: 214 GMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 MH+++ D H + +G + I++D I + LE + D E + Sbjct: 193 HMHIHNNFGD----RDSHLGINKGELDIIEILNIVKDK---DITVTLEITHVDELRESLD 245 Query: 274 WLKA 277 L Sbjct: 246 ILYK 249 >UniRef50_A0P1Y9 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1Y9_9RHOB Length = 304 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 37/274 (13%) Query: 3 YIGAHVSAAGGLANAAIRAAEI----DATAFALFTKNQRQWRAAPLTTQTI-DEFKAACE 57 +GA +A GL + +I L W + + + + Sbjct: 7 RVGASAESANGLPATINESLDILEKIGTDTVEL----PLLWMELVANGEVMQARLEELRQ 62 Query: 58 KYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM-- 115 H + IN L+ + +LG + H G Sbjct: 63 ALAGRPFGYSAHAAIGINFMS-DPVYLDLHVRLARAHLAISAELGCEHMVLHTGFCPPYF 121 Query: 116 -QISEEDCLARIAESINIALDKTQ--GVTAVIENT-AGQGSNLGFKFEHLAAIIDGVEDK 171 + E + E+ ++ + GV +EN A +G+ L LA + + Sbjct: 122 AKPQIEKLYDQQRETFLKLGEEAKAAGVVLCVENIFAEKGNRLTATPSQLAKELRLINHS 181 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGS----- 226 V C+D HA L + + V + +H++D+ G+ Sbjct: 182 -HVMACLDISHA-----ALHCDSLGLDLMEEAGALVPLA--KHVHIHDSFGRTGNIPVHT 233 Query: 227 --------RVDRHHSLGEGNIGHDAFRWIMQDDR 252 D H +G GN+ D + + + Sbjct: 234 QQEALGLGVGDLHLPIGWGNLPFDEIVCLDRFPK 267 >UniRef50_A1ZRD9 AP endonuclease, family 2, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRD9_9SPHI Length = 266 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 29/228 (12%) Query: 63 SAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH---LMQIS 118 + H ++ + + + + ++ +LG++ + FHP Sbjct: 59 PYPVTMHGAFWDLRIAVREPMIRQVAEFRMRQSLEIAHELGINKVVFHPNYTSRRNDDDM 118 Query: 119 EEDCLARIAESINIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGV 176 + + + + + G+T +ENT +++ I++ + D Sbjct: 119 KRYWVGQQIDFWRALQPDAQKHGITIYLENTGEP------TADYIHQILNQL-DPQVFAT 171 Query: 177 CIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGE 236 C+DT H G ++ +G+ +H N K D H + E Sbjct: 172 CLDTGHLNVFG----DNKNVLDWVNTYSHQLGY---VHLHANFGK------RDEHIAYTE 218 Query: 237 GNIGHDAFRWIMQDDR---FDGIPLILETINPDIWAEEIAWLKAQQTE 281 GN+ F + + +I+E + + + + L+ Q + Sbjct: 219 GNMDFTGFFEALTNIEQGSGTRPWIIIEVKSREAYLKSYEALRRQYGQ 266 >UniRef50_C1F9P4 AP endonuclease, family 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9P4_ACIC5 Length = 302 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 82/272 (30%), Gaps = 49/272 (18%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 GL + RA A LF Q + + E+ H Sbjct: 48 GLLDLVTRA---GAQGVELFAARQHFDYTNRQEIRDLAEWFR-----SNPLEPFSMHAPL 99 Query: 73 L------------INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 +NL HP + D ++ EQ+ L ++ H G S Sbjct: 100 YSDREMGRGGGPSVNLLHPEKSRRIDAMDEVKRALETAEQIPLRVMVVHLGDREDTWSPR 159 Query: 121 DCLARIAESIN--IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 L ++ A GV +EN + + + EH+ I+ +GVC+ Sbjct: 160 -ALEYSLTALEHLRAFANPLGVKLAVENLQNEVT----RPEHIREIL-HTGHFKDIGVCL 213 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGN 238 DT HA +T A +++R HL+D D H GEG Sbjct: 214 DTGHAHL-------GDGVSETIAQL-----REFIRTAHLHDNHG----NKDEHLWPGEGE 257 Query: 239 IGHDAFRWIMQD-----DRFDGIPLILETINP 265 I D ++ I LE N Sbjct: 258 IAWDETMQELKSAPQTPAGVLEIHYALEEPNE 289 >UniRef50_C4XSI1 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSI1_DESMR Length = 272 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 75/240 (31%), Gaps = 17/240 (7%) Query: 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLG 102 L + + + H + + G SRD + M+ Sbjct: 39 LDATDAAFHRELARLFADAGVPVTVHLPFFDLQPGSADARIRAASRDRLLGAMETAAIYA 98 Query: 103 LSLLNFHPGS--HLMQISEEDCLARIAESINIALDKTQG-VTAVIENTAG-QGSNLGFKF 158 + H L S D R A++ L G +ENT + Sbjct: 99 PRRMIGHAAYDRFLYIRSFPDWAQRSADTWAAVLAAWPGHPPLCLENTHETDPQTVSGTI 158 Query: 159 EHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN 218 L + E+ VG C D H ++ + + A YL +HL+ Sbjct: 159 AALRERLPA-EETEIVGACFDVGHWYSFAEG-KKRDNLDAWLDALA-----PYLLHLHLH 211 Query: 219 DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 D +F D+H G+G I +A + + E P+ + +A++KA+ Sbjct: 212 DNDGSF----DQHLGPGQGEIPFEAIFAGLAARQLTP-TATFEPHTPEAFEAALAFVKAK 266 >UniRef50_Q2RIM8 Xylose isomerase-like TIM barrel n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIM8_MOOTA Length = 271 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 28 AFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPV-TEALE 85 +F + + WR ++ + Y+ H + +NL + Sbjct: 30 GLEIFAEGPQ-WRDP---ENGLNLTRTLLRGYNNPR---SLHAPFYDLNLASEKYPPIRD 82 Query: 86 KSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKT---QGVTA 142 + D + +L + H ++ + + + ++I L + G+ Sbjct: 83 LTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGTRQRVKNILPLLAASARQAGIRL 142 Query: 143 VIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFAD 202 +EN G G F E + ++ + +D HAF G+D+ Sbjct: 143 AVENI-GLGPTQLFDSEEYVNLFREIDG---IFALLDIGHAFLNGWDI----------PR 188 Query: 203 FARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 +G + L +HL+D + D H +G G+I R + Sbjct: 189 VIWQLG-EKLVALHLHDNRG----HADEHLPIGMGSINWRLIREAL 229 >UniRef50_B8IW61 Xylose isomerase domain protein TIM barrel n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW61_METNO Length = 278 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 90/271 (33%), Gaps = 37/271 (13%) Query: 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH-YTSAQILPHDSYL 73 A + R A++ F L PL + + + + + L Sbjct: 19 AESVRRLADLGYRTFELVIHPGHL----PLDGFSTADRRHLVAVLDEVGATDCALNLPSL 74 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESI 130 NL S F D + LG+ L PG S L + A + ESI Sbjct: 75 DHNLASSTPRVRAASVQMFRDAIDLASDLGIGWLVTVPGRMSPLFPPGISERTAWMRESI 134 Query: 131 NIAL--DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED--KSRVGVCIDTCHAFAA 186 L + +GV +EN F A++ D V +V C D +A Sbjct: 135 EALLPHAEARGVGLAVENIP------IAAFPDAASLGDFVRSFASPKVAACYDAANAHFI 188 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRW 246 G + + LR +HL+D G V RH +G G + Sbjct: 189 G------EDPVAGMHSLSDC-----LRILHLSDT----GRTVWRHDPVGTGTVPFAEVAR 233 Query: 247 IMQDDRFDGIPLILETINPDIWAEEIAWLKA 277 + F G P +LE I+P+ E A L++ Sbjct: 234 AVTSINFTG-PCMLEIIDPEP---EAAILRS 260 >UniRef50_A8TLJ8 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLJ8_9PROT Length = 275 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 99/279 (35%), Gaps = 39/279 (13%) Query: 4 IGAH-------VSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAAC 56 +G H +SA L + A R F L W LT Sbjct: 6 VGIHTYSYIWQMSAHDTLVHLADR----GYRRFELLINRPHVW-PEELTEAERRATARLL 60 Query: 57 EKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SH 113 + + T + P L +NL P E +R + ++ + + PG Sbjct: 61 AERNLTIEVLNP--PSLDLNLVSPSPEMRSMTRAHYRRVIELAADWSVPQVLVVPGKTHP 118 Query: 114 LMQISEEDCLARIAESINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDK 171 L+ + AE++ + +G+ V+EN + L + ID + + Sbjct: 119 LLPAPADRVWGWFAEAVAELDRYAEDKGLGIVLENIP---MAFLPTADALMSAIDRLGN- 174 Query: 172 SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRH 231 R+G+C D +A A +P + + A L+ +HL+D G + H Sbjct: 175 DRLGICYDAANAVFA---RESPGDGLRLVAS--------RLKVLHLSDT----GLQKWDH 219 Query: 232 HSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAE 270 ++G G + M+ +P +LE I+PD A+ Sbjct: 220 ATIGSGVVPFAEVADAMRKIGV-DVPTMLEIISPDGDAD 257 >UniRef50_A0LE74 Xylose isomerase domain protein TIM barrel n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LE74_SYNFM Length = 277 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 68/239 (28%), Gaps = 28/239 (11%) Query: 38 QWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQ 96 + A L + E A K H + +I H + ++ G + S F + Sbjct: 42 GFEAVELDRMSGKELSAVAGKLHGRNCRISLHGPFWDLSTGSVDPLIRKVSVSRFQQLFE 101 Query: 97 RCEQLGLSLLNFHPGSHLMQI--SEEDCLARIAESINIALDKTQG--VTAVIENTAGQGS 152 + + H G L + + +G + ++EN Sbjct: 102 TLDIFRPVQVVLHTGFDPRHHRGHRRAWLDNSMAIWEPLVKRAEGLNIPLLLENVWE--- 158 Query: 153 NLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYL 212 E + ++ G C+D H + + L Sbjct: 159 ---RDPELHLELFGRIDSP-FFGFCLDVGHQHSF-----SGTALSVWLEALWHV-----L 204 Query: 213 RGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEE 271 R +H++D D H +G G+I ++ + L LE + + E Sbjct: 205 REIHVHDNDG----SRDAHLPVGRGSIDFALLFDFLKARNLTPL-LTLE-PHLEEHLPE 257 >UniRef50_B3DUJ2 Sugar phosphate isomerase/epimerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUJ2_METI4 Length = 282 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 87/281 (30%), Gaps = 34/281 (12%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH-YTSAQILPHDS 71 L + A A ++ R Q +E K + + H Sbjct: 14 PLTESLPLIARGGFKAVEIWASPDSSCRYTHFDFQNTNEVKQIKRQLSSLGLKAVSLHSP 73 Query: 72 YL--INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI-----SEEDCLA 124 + +L HP E S + + ++L ++L HP ++ L Sbjct: 74 FYPSFDLSHPDRLIQEASLNITLSAAAALKELEGNILVVHPSGIECDRVLDLEERKERLN 133 Query: 125 RIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 RI +SI++ T + V+ S LG L ++ VG+C DT H + Sbjct: 134 RIEKSISLIYQHTAKLGLVLALETLLPSFLGSDLVFLYQLVSQ--YPPSVGICFDTGHVY 191 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAF 244 LR + AR + +H+ D D H +G I F Sbjct: 192 -----LRYKDNFINRYRQIAR-----KVVALHVQDTLGEH----DDHLPPAKGVICWKDF 237 Query: 245 RWIMQDDRFDGIPLILE-----TINPDIWAEEIAWLKAQQT 280 +++ F +LE D + +L+ Sbjct: 238 VKALKESNFQS-TFLLEISSQWIKGNDPYI----FLRNLYD 273 >UniRef50_B5WBQ3 Xylose isomerase domain protein TIM barrel n=1 Tax=Burkholderia sp. H160 RepID=B5WBQ3_9BURK Length = 293 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 88/250 (35%), Gaps = 28/250 (11%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL-INL 76 +R E+ F L + + ++ + L NL Sbjct: 28 VLRLGELGYREFELVLNPPH-LALEDFPSGARAKLRSTMAAAGLAVRSLNV--PSLDHNL 84 Query: 77 GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG--SHLMQISEEDCLARIAESINIAL 134 P+ S D F+D + LG + L PG S L A + ES++ L Sbjct: 85 ASPMRRMRRYSVDLFLDAIDLAADLGATDLVVAPGRMSPLFPPVLTQREAWMRESLDALL 144 Query: 135 DKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRT 192 + Q GVT +EN L A + +S +GVC D +A G + Sbjct: 145 PRAQRRGVTLALENVPFASFPDAHT---LGAFVRSYGSRS-LGVCYDVANAHFIG---ES 197 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDR 252 PA+ + + +R +HL+D + RH +G G++ + D R Sbjct: 198 PADGLRALREL--------VRVVHLSDTRRDA----WRHDEVGLGDVPFAQVHNALTDIR 245 Query: 253 FDGIPLILET 262 F+G +LE Sbjct: 246 FEG-TCMLEI 254 >UniRef50_Q0W054 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W054_UNCMA Length = 265 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 30/234 (12%) Query: 40 RAAPLTTQTIDEFKAACEKYHYTSAQILPHDS------YLINLGHPVTEALEKSRDAFID 93 +A D ++ + I+ H +++ G ++ + Sbjct: 21 QAIEFALFHGDMGGEWADRIRFDG-PIIVHAPEKFGDGTILDAGSEDEVQRTRATEMLKR 79 Query: 94 EMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQ--- 150 + +L L+ HPG + I + V V+EN G Sbjct: 80 TIDISVRLQAELVIIHPGGVFREHRTVSPERLIRTMAELKACAGNRVELVLENMPGYYRT 139 Query: 151 -----GSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFAR 205 L + + A++D + VG+C+D CHA Y + + ++ Sbjct: 140 GGTLWHPCLLTGADEIVAVLDRTD----VGLCLDVCHAKL--YCNVSGHDFKQYIETL-- 191 Query: 206 TVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLI 259 Y R +H++DA G +GEG I + + +D +P I Sbjct: 192 ---LPYARHLHVSDAMGEAGEG----LQIGEGEIDWEWLASVTRDLDLVAVPEI 238 >UniRef50_B0PBZ9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PBZ9_9FIRM Length = 280 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 92/280 (32%), Gaps = 34/280 (12%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT---SAQILPH 69 L +A A + ++ + +T++ + + Y + Sbjct: 14 PLEHAFAAAQKYGFDGLEIWGGRPHAY-PQDVTSELAAQVRRWKSVYGVETPMYTPVSIG 72 Query: 70 DSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNF---HPGSHLMQISEEDCLARI 126 Y NL + + + F + C + + + HPG + + Sbjct: 73 MPY--NLCAENQQERQDTLAYFRKAIDGCAAMEIPRMLVVADHPGYTVR---RRAAWRQF 127 Query: 127 AESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 E+++I +GV VIE S + + A ++ + +DT Sbjct: 128 VENLHILGSYGAQRGVRLVIEPLTPMESPVITTADDCADALEDIG--------LDT---V 176 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAF 244 A D+ P + + + + ++ +HL + R D H L G + + Sbjct: 177 EAMLDVVPPRIAHEPLSSYFTKL-RGRMQYIHLCNNDG----RTDAHTRLDVGELPVEDI 231 Query: 245 RWIMQDDRFDG---IPLILET-INPDIWAEEIAWLKAQQT 280 ++ RFDG + L E +P++ A L Q + Sbjct: 232 LRLITQYRFDGYVTVELYSENYRDPELMLANAARLLRQYS 271 >UniRef50_B9KBM8 Xylose isomerase domain protein TIM barrel n=2 Tax=Thermotoga RepID=B9KBM8_THENN Length = 307 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 99/300 (33%), Gaps = 49/300 (16%) Query: 1 MKY-IGAHVSAA---GGLANAAIRA---AEIDATAFALFTKNQRQWRAAPLTTQTIDEFK 53 M IG +V G + I + + + ++ K Sbjct: 4 MVKGIGTNVDTRRVNGSIKRLVSELEFFKSIGFDYVEIPAAGLDVIARGRIIKKRLERVK 63 Query: 54 AACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH 113 Y++ H +INL K +A ++ ++ ++ +H Sbjct: 64 EILSNYNFR---YTVHAPDVINLKRKTNPWHYKVMEAV---IEFAGEINAEVIVYHYNEV 117 Query: 114 LMQISEEDCLARIAE--SINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE 169 I + + R AE ++ L K +G+ IEN + ++ V Sbjct: 118 DHSIDVPERIQRRAEILALRDLADLAKEKGIVIGIENVQHP-------VSEVLELVKQVN 170 Query: 170 DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST------ 223 V + ID H F + T + + + G Y +H++D Sbjct: 171 HP-NVKLTIDIGHLF-----ILTSYRGLNFYEELKK--GLPYAVELHVSDNFGESPQTYQ 222 Query: 224 ----------FGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 D H +GEG+I ++ I+++ F GI +ILE + D +A+E A Sbjct: 223 QIPDVEAFRFVYGIGDLHLPIGEGDIPYNRVLKIIRESDFSGI-VILEINSMDRFADEYA 281 >UniRef50_C5RPK7 Xylose isomerase domain protein TIM barrel n=1 Tax=Clostridium cellulovorans 743B RepID=C5RPK7_CLOCL Length = 252 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 67 LPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 H ++ + G + E ++ F + +LG + H G + + R Sbjct: 58 SIHGTFTDLCFGSKDSLIREVAKKRFEYSYEISRKLGCKHIVLHHGYVPGTSYPPNWVKR 117 Query: 126 IAESINIAL-DKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAF 184 + L DK + IEN L + ++ I+ V+DK R+ +C+D HA Sbjct: 118 SKIFWDDFLRDKDEETVFHIENL------LEHTPDLISEIVSTVDDK-RLNICLDVGHAN 170 Query: 185 AAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAF 244 + + + +GF +HL++ D H +G I Sbjct: 171 C-----NSKTSVLEWIKKLNKQIGF-----VHLHNNYGE----QDEHSGFEKGTIDFLEI 216 Query: 245 RWIMQDDRFDGIPLILETINPDIWAEEIAWL 275 ++D + I I ET N D + I WL Sbjct: 217 CNALEDYAPNAIWGI-ET-NIDDMEDSIKWL 245 >UniRef50_C1XY70 Sugar phosphate isomerase/epimerase n=5 Tax=Thermaceae RepID=C1XY70_9DEIN Length = 254 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 80/240 (33%), Gaps = 25/240 (10%) Query: 46 TQTIDEFKAACEKYHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLS 104 + + E H ++ +N V A + S + ++ +G + Sbjct: 36 DPRLPSARELAEMGRVAGVGFTLHLPFVDLNSASLVPLAWKSSLERTKTALEFGHTIGAA 95 Query: 105 LLNFHPGSHLMQISEEDCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLA 162 H G ++I E L + AL + +ENT ++L + L Sbjct: 96 CAVMHTGQVPLRI--EIALKYARFRLAEALAALQPSPIPIALENTRLSEADLLEGVDELK 153 Query: 163 AIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKS 222 +++ D G C+D H G P ++ + L HL+D + Sbjct: 154 SLL---ADHPAYGFCLDVGH----GQIELGPGGYKRYYQAL-----SDRLIHWHLHDNQG 201 Query: 223 TFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETI-NPDIWAEEIAWLKAQQTE 281 + D H +GEG + R +Q F G LE + +A L+ + E Sbjct: 202 ----QQDEHLVVGEGTVDWAWVRGKLQ--GFSGTAA-LEVQGGVEGVRRSVAILRGETPE 254 >UniRef50_A8THY1 Xylose isomerase domain protein TIM barrel n=1 Tax=Methanococcus voltae A3 RepID=A8THY1_METVO Length = 308 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 52/295 (17%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSY 72 + E++ + F +N W+ + K K + H Y Sbjct: 25 PIEEIVDIVRELELSCFEFVVENPEFWKNR-YDEDYLKNLKKEMLK----IKHLCVHAPY 79 Query: 73 L-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG----SHLMQISEEDCLA--- 124 + +N + + + + + FH G L +I+EE Sbjct: 80 IELNPASTNENLRNITLEETFWALNVAKFYEAKHMVFHAGQRSAKRLPRINEEYAYLSNY 139 Query: 125 -RIAESINIALDK-------------TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVED 170 R+ +N +D + + +EN+ + L E + ++ Sbjct: 140 IRLCCKLNEYVDYRDLESVQQIDELISNELILSVENSPQGINKLCKTPEEINYYLNK--- 196 Query: 171 KSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDR 230 ++ +D HA +F + V + +H++ S+ Sbjct: 197 YEKLRFTLDFVHART-------------HVEEFLKNVDTSKISNVHIS----GVNSKDTD 239 Query: 231 HHSLGEGNIG----HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 H+SL + + + +ILE N ++ K Q+ + Sbjct: 240 HYSLKNSEEPYKSLFEKSIYDLVHKYNYKSSIILE-FNDLLYNNGNDMTKKQKMD 293 >UniRef50_A4WYQ2 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Rhodobacter sphaeroides RepID=A4WYQ2_RHOS5 Length = 286 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 76/276 (27%), Gaps = 31/276 (11%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 A A + L+ L + Sbjct: 22 PFAEVARLMRGFGLSRIELWGVAPHL----DLFHADAARVAEVKRVLAGEGLSVRCLTPE 77 Query: 72 ---YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAE 128 Y +N+ S D F +LG S L PG E R AE Sbjct: 78 QVVYPVNIASGDDAWRRASIDRFRRAADIAAELGASHLFLTPGRGYESEPAERAWQRSAE 137 Query: 129 SINIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAA 186 ++ QG+ ++E SN+ +A ++ V + + V +D A Sbjct: 138 ALAEIAEHAAGQGLRCLLEPLQRLESNIAQSAADIARLMGMVG-AANMDVVLDLVAMTCA 196 Query: 187 GYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRW 246 G + + F + L +H+ D + H G+G + + Sbjct: 197 G---DRVGDYLRLFGE--------RLVHVHVVDGRPAG------HLVWGDGELPLADWLG 239 Query: 247 IMQDDRFDGIPLILETINPDIWAEE--IAWLKAQQT 280 + + G L E +A + AW + + Sbjct: 240 ELAAAGYAG-TLTFEPFGDGSYALDPVTAWTRNLRA 274 >UniRef50_A4FYK6 Xylose isomerase domain protein TIM barrel n=5 Tax=Methanococcus RepID=A4FYK6_METM5 Length = 269 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 79/254 (31%), Gaps = 35/254 (13%) Query: 1 MKYIGAH-VSAAGG-LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M IG + + E+ F +N W+ I+ K Sbjct: 1 MVKIGCSSLFFWEYDIEEIVDIFLELGLKNMEFFPENPEFWKKRN-DLDYINS-----VK 54 Query: 59 YHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQI 117 + +I H Y+ +N + + ++ L+ H G Sbjct: 55 SELSKLEITIHSPYIELNSSSTNENIRYVTLMETFWAIDLSKKFNAKLITIHAGKRPTHR 114 Query: 118 SE-EDCLARIAESINIALDKT--QGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRV 174 ++ + + +++ + +T +EN+ + +N+ + E + + ED + Sbjct: 115 VPTDEEYDNFDDYLKKSIEYALKKEITLCLENSPEKINNICYNVESMKKTLYKFED---L 171 Query: 175 GVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSL 234 + +D HA +F + ++ MH++ G H+ L Sbjct: 172 YITLDIAHAR---------ENSLDFIKNFH-----EKIKNMHIS------GVNSKDHYPL 211 Query: 235 GEGNIGHDAFRWIM 248 E I D ++ Sbjct: 212 SESRINFDKTLNLL 225 >UniRef50_D1X164 Xylose isomerase domain protein TIM barrel n=4 Tax=Streptomyces RepID=D1X164_9ACTO Length = 290 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 88/283 (31%), Gaps = 46/283 (16%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP----- 68 L +A A++ L + P+ + + + ++ Sbjct: 17 LDDALGLLADLGYEGVGLTLDHMH---LDPMAPDLAERTRQVRRRLTSLGLRVTVETGAR 73 Query: 69 --------HDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120 H L++ P +A + + +LG ++ G S + Sbjct: 74 YVLDPRRKHGPSLLD---PDPDARAARTALLVRAVDVAAELGAHAVHCFSGVTPPGTSPD 130 Query: 121 DCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCI 178 R+ E+I L+ GV +E G +L + + D +G+ + Sbjct: 131 TAWKRLTEAIAPVLEAADRSGVPLAVEPEPG---HLLATLADFHHLRALLGDPGPLGLTL 187 Query: 179 DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRG-MHLNDAKSTFGSRVDRHHSLGEG 237 D H + TP EC + A + R V + +R +H H GEG Sbjct: 188 DIGH--CQCLEEATPLECVRQSAPWLRHVQIEDMRRGVH-------------EHLPFGEG 232 Query: 238 NIGHDAFRWIMQDDRFDGIPLILETI-----NPDIWAEEIAWL 275 I + + G+ ++ E P++ I +L Sbjct: 233 EIDFPPVLAALAASDYRGLTVV-ELPRHSHAGPELARTSIDFL 274 >UniRef50_Q97DH8 Predicted endonuclease n=3 Tax=Clostridiales RepID=Q97DH8_CLOAB Length = 271 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 80/246 (32%), Gaps = 25/246 (10%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP-HDS 71 + + E + L+ + + + E + I P + + Sbjct: 14 PIEKFLDKVEESPFDSIDLYCSAPQ-LNIFDYSLGKLIELDRNIRRRKLNVMAITPENCT 72 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN 131 Y +N P E S + + E LG S + G ++ ES+ Sbjct: 73 YPVNFCTPDIITRESSIRYYQRAIDTAEFLGCSNVQISTGFGYFNQPRDEAWKYCQESLA 132 Query: 132 IALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYD 189 + + + V ++E +N+ + ++ +I ++ + VG+ D Sbjct: 133 QVIAYCERKNVRLMLEELKATTTNVLISSKDISNMIREIDSANIVGM-----------ID 181 Query: 190 LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 L +T D+ +G + ++ +H ND H G+G+ + ++ Sbjct: 182 LDQMTYAGETIDDYFDNLG-EKIQHIHFNDRG---------HTVPGDGDFPMKEYYSALK 231 Query: 250 DDRFDG 255 + G Sbjct: 232 KRGYTG 237 >UniRef50_A0LJR1 Xylose isomerase domain protein TIM barrel n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJR1_SYNFM Length = 274 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 82/252 (32%), Gaps = 27/252 (10%) Query: 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP--- 68 L + A+I + + L+ + +AA ++ + + Sbjct: 13 HSLKDTIRILADIGYQGIEIMADVPHAY-PTQLSAAGRKQIRAALREHRMEISNVNAFMH 71 Query: 69 HD---SYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 H +Y + ++ + ++ + LG ++ PG L I+ E+ Sbjct: 72 HADGDTYHPSWIEKDAGERKRRVEYTLNCIDLARDLGARTISTEPGGPLDGITREEGFRF 131 Query: 126 IAESINIALDKTQG--VTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHA 183 E + ++ + V +IE G +F L ++D G+ D H Sbjct: 132 FREGLAAVEERARKKRVRILIEPEPGLLIENSRQFLELFRLLD----PEVFGLNFDIGHF 187 Query: 184 FAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDA 243 F G + + +G HL D + SR+ H GEG I A Sbjct: 188 FCVG------EDPQALIPKMKSMIG-----HFHLEDIAA---SRIHHHLMPGEGAIDLPA 233 Query: 244 FRWIMQDDRFDG 255 ++ F+G Sbjct: 234 VLEAVRGIAFEG 245 >UniRef50_Q214G7 Endonuclease IV n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q214G7_RHOPB Length = 315 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 75/223 (33%), Gaps = 22/223 (9%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLG 77 ++ AF L + +T + F+ E + H SY I Sbjct: 27 LHWLVDLQLDAFEL-----QMTYGPRMTAENCVLFRQMSEATGVR---LSVHASYFIVFT 78 Query: 78 HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAES----INIA 133 + +S D + E+LG + HPG L S + L R E+ +N Sbjct: 79 SDDPAKILQSEDTLKRTYEAAERLGARTIVLHPG-PLYGASGSEPLERFVENTGNCLNSI 137 Query: 134 LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYD-LRT 192 G+ TAG+ LG + + I ++ CID H A L Sbjct: 138 GRTDIGLFV---ETAGKVGQLGS-VDEILEICTRLDGTF---PCIDFGHVHARTLGTLED 190 Query: 193 PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVD-RHHSL 234 PA + + + + +H + FG R + +H ++ Sbjct: 191 PAAVDAIASQLELYLQSRDNLRIHFHYTPIHFGQRGEIQHRAI 233 >UniRef50_C5ESX6 AP endonuclease n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESX6_9FIRM Length = 276 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 29/251 (11%) Query: 18 AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS----YL 73 + F L+ Q++ + ++ +I+ Y Sbjct: 25 LDSLERMGVKQFELWAGAPHFCNFI----QSLSDAGKLRKEVEARGLKIVCLTPEQVLYP 80 Query: 74 INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIA 133 N+ E + S + F + + +LG+ + G ED R ES+ Sbjct: 81 HNIASSDKELRQFSLEYFYKYIGQTAELGVDKMLCCAGWGDYDQDREDAWKRSVESLWSM 140 Query: 134 LDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLR 191 +++ + G+T E SNL F +++ ++D +C+DT G + Sbjct: 141 VERAKKAGITLAFEILGRFESNLVNDFASTRRMMEEIQDP-CFKLCLDTVPMRTCGSSIS 199 Query: 192 TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDD 251 F F + H+ D + G H G G A+ ++ Sbjct: 200 ------GFFQAF-----PGRICHFHMTDG-TPAG-----HVPCGTGEHPIGAYIAELERL 242 Query: 252 RFDGIPLILET 262 +D + LE Sbjct: 243 GYDR-YITLEI 252 >UniRef50_C9Y264 Protein frlC n=2 Tax=Cronobacter RepID=C9Y264_CROTZ Length = 294 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 92/281 (32%), Gaps = 27/281 (9%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS- 71 L +A A E+ L+ + A L I + K Y P + Sbjct: 32 PLEHAFRDAHELGYDGLELWGGRPHAF-APDLKAGGIRQVKELSRVYQMPIIGYTPETNG 90 Query: 72 YLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESIN 131 Y N+ +S D M+ +++ + R+A+++ Sbjct: 91 YPYNMMLGDERMRRESLDMIKLAMEMAKEMDAGFTMISAAHAGYLTGPDAIWHRLADNLR 150 Query: 132 IALD--KTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYD 189 + + G+ ++E SN+ + + V R+ +D C F G Sbjct: 151 ELCEVAEDIGIDLLLEPLTPYESNVVCNANDVLRALSMVPSP-RLYSMVDICAPFVQG-- 207 Query: 190 LRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 + + +G LR +H+ D+ D H+ GEG + + Sbjct: 208 --------EPVMSYFDKLG-DKLRHLHIVDSDGAS----DSHYIPGEGKMPLRELMRDII 254 Query: 250 DDRFDGIPLILET-----INPDIWAEE-IAWLKAQQTEKAV 284 D ++G I E P ++A + +A + E+A+ Sbjct: 255 DRGYNGYCTI-ELVTMYMNEPRLYARQALARFRDLLPEEAL 294 >UniRef50_Q1IHQ2 Xylose isomerase-like TIM barrel n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHQ2_ACIBL Length = 277 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 91/299 (30%), Gaps = 48/299 (16%) Query: 1 MKY-IGAHVSAAGGLANAAIRA-AEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK 58 M I ++V L + A A + A A +F Q + E + Sbjct: 1 MLKAISSYVQVKERLHPGMLDAYARMGAQAIEIFAARGHF---DYTNRQHVRETANWFKT 57 Query: 59 YHYTSAQILPHDSYL------------INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLL 106 + + H +N+ +A + D ++ EQ+ L Sbjct: 58 SGVPLSSL--HAPMFADSDWGRDGTPPLNIASLDKKARILAMDEIKRAIEVAEQIPFRFL 115 Query: 107 NFHPGSHLMQISEEDCLARIAESIN--IALDKTQGVTAVIENTAGQGSNLGFKFEHLAAI 164 H G SE SI A K GV ++EN + E L + Sbjct: 116 IQHIGLPNESFSEHKFFDAATASIEHLHAFAKPLGVRVLLENIPNE----LSTPERLHEL 171 Query: 165 IDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF 224 + +G C D HA E F V +R H++D Sbjct: 172 V-TTAHFDDIGFCFDIGHAHI-------EQGVEAAF-----AVMKDRIRSTHIHDND--- 215 Query: 225 GSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKA 283 + D H G+G+I + +++ PL+ E AE L+ + E A Sbjct: 216 -KQRDAHLWPGDGSIDWNEAMKLLRSAPLVP-PLVFEIE-----AETAGNLEEKFGEVA 267 >UniRef50_A8A905 Xylose isomerase domain protein TIM barrel n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A905_IGNH4 Length = 285 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 31/231 (13%) Query: 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYL 73 L A E ++ D +K + H + Sbjct: 17 LEELLKEAREAGFDYVEFSLDYPLPYK--------ADLVAEIVKKIKDFGLAVSFHAPWR 68 Query: 74 -INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSH--LMQISEEDCLARIAESI 130 +++ E + S D ++ +LG + +H + L + + ++ E++ Sbjct: 69 GLDVATLWPEVRKASIDIIKKSIRMASELGAEYVVYHVTTPEKLFKDTVDEVYEAGKEAV 128 Query: 131 NIA--LDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 + V A +EN G+ ++D++R C D HA Sbjct: 129 AELTDFAREMSVEAAVENVGNLGTP---------EFFGILKDETRAKFCFDVAHAVTTFM 179 Query: 189 DLR----TPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLG 235 + ++ + +G + L H++ ++ H LG Sbjct: 180 QRHKLKLNDVDVDEVIELWKNAIGGRTLCA-HVHGVEAP----RREHRPLG 225 >UniRef50_Q5K9B1 Expressed protein n=2 Tax=Filobasidiella neoformans RepID=Q5K9B1_CRYNE Length = 492 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 98/274 (35%), Gaps = 44/274 (16%) Query: 7 HVSAAGGLANAAIRAA-----EIDATAFALFTKNQRQWRAAPLT-TQTIDEFKAACEKY- 59 H+S +GGL + R + ++F + ++ + + + + Sbjct: 214 HLSTSGGLTPSLKRISLPYYPYPKVKGVSMFINHPKRRVHEQIRVKEDVKNGQDIFTATM 273 Query: 60 -----HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLN------- 107 + + H Y +NL ++EM++ + LG+S L Sbjct: 274 DSVMDNDWRKTSMVHGVYTVNLLSED---------HVMEEMRQVKALGMSTLVIQYVRLF 324 Query: 108 ----------FHPGSHLMQI--SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLG 155 F GS + L R+ + QG+T +ENT + Sbjct: 325 YRISSLLFPPFSLGSAGKDDPSYKHVQLTRLVSDLREITRAVQGITLALENTVHPSPHSL 384 Query: 156 FKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGM 215 L I+ S++ +C+D H + +DL + + ++ + + T G + G+ Sbjct: 385 TTLSSLCTILTHFP-PSQLKLCLDLSHLHVSEFDLNSESGRKEMW-ELLETAGKARVVGV 442 Query: 216 HLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ 249 H++D G + DRH + I HD + ++ Sbjct: 443 HVSDNYVAHGGKGDRHAN--SLIIPHDPIQSLLS 474 >UniRef50_Q89P16 Blr3667 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89P16_BRAJA Length = 276 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 96/293 (32%), Gaps = 42/293 (14%) Query: 1 MKYIGAHVSAAGGL------ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKA 54 + +GAH G +A R A L + +A Sbjct: 3 LPVLGAHTF---GFAWDCVAEDAIERLAAAGYRTIQLMATPPH-FDPWVQDAARTRRIRA 58 Query: 55 ACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 E++ + + S INL P ++ + +++ + R +LG + GS Sbjct: 59 LIERHCLSLLALDL-ASSDINLASPSQHVVDFAVSSYVATIDRAAELGARWICV--GSGR 115 Query: 115 MQISEEDCLARIAESINIALDKTQ------GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 R+ S A + GV ++EN L + +D Sbjct: 116 RHALLAKANDRLMVSFRDAFARIYDKAERAGVPVILEN---HPQGLLASAADITRFLDA- 171 Query: 169 EDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRV 228 E + + V D +A A G + + + L +HL+D+ Sbjct: 172 EGYAGMPVIYDVANAVAIG------EDPVEGLRAL-----WPRLGIVHLSDSP----KGQ 216 Query: 229 DRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWA---EEIAWLKAQ 278 RH +G G I A +++ ++G ++LE ++ E A LK Q Sbjct: 217 WRHDPIGSGEIDFAAIAALLRQRAYEGR-IVLEILSDQPLKDIDEGAAILKRQ 268 >UniRef50_C6PL93 Xylose isomerase domain protein TIM barrel n=3 Tax=Firmicutes RepID=C6PL93_9THEO Length = 280 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 105/294 (35%), Gaps = 31/294 (10%) Query: 2 KYIG--AHVSAAGGLANAAIRAAEIDATAFALFTK---NQRQWRAAPLTTQTIDEFKAAC 56 IG AH G+ A +AA++ TA L + + LT Sbjct: 3 MRIGIRAHDLGNLGVEKLAQKAAQLGLTAVQLALTKSFPELNLQVGSLTPGLARYIGNFF 62 Query: 57 EKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLL-----NFH-- 109 ++Y+ A + +N+ HP + + F + ++ G S++ N H Sbjct: 63 QQYNVQIAVLGC----YVNIIHPDLNKRRELLEFFKEHVRYARDFGSSIVGTETGNVHTK 118 Query: 110 PGSHLMQISEEDCLARIAESINIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 G + EE + + +S+ +++ + GV IE ++ + + + ++D Sbjct: 119 MGYTIDNFKEEAFIE-VVKSVRELVEEGEKFGVIVGIE---PGVNHPVYSSKMMKRLLDE 174 Query: 168 VEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSR 227 + + + V D + A + ++ F + +H D G Sbjct: 175 IPS-NNLQVIFDPANLLTAENYIHQNEIFQEAIELFG-----DRIVVVHAKDFVIENG-- 226 Query: 228 VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTE 281 +G+G + + +++ + I +++E+ E I +LK + Sbjct: 227 KLVFVPVGKGFLNYHVLFQLLKYKK-PYINILIESTKEPFIKESIEYLKNIYEK 279 >UniRef50_A4EBY9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBY9_9ACTN Length = 281 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 77/247 (31%), Gaps = 22/247 (8%) Query: 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILP--HD 70 + A E L+T + + ++D+ + +Y + P ++ Sbjct: 17 SIETFFKAAGEAGYRNIELWTGSMHLYVD-CHEHDSVDKIRDLAAQYGIKIVCVCPEQNN 75 Query: 71 SYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 N+ ++ F + + +LG+ + G + ED AR + Sbjct: 76 PKPWNVAVRGEAGQKRILSYFKNVIDVAVELGVPQILVTSGWAYLDEPAEDAWARSVAML 135 Query: 131 NIALDKTQ--GVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGY 188 G+ +E S L + +A I++ V D+ + CID AG Sbjct: 136 RSVCAYADTRGIRVALEALQPSESVLVNTAQDVARILEAV-DRPNLKACIDFGAMEVAG- 193 Query: 189 DLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIM 248 T + D + +H + G+ H + G+G A + Sbjct: 194 --DTIDGYFEVLGD----------KIVHTHFVDVGGGTT---HLAWGDGERDMRADLEAL 238 Query: 249 QDDRFDG 255 + G Sbjct: 239 MRHGYTG 245 >UniRef50_Q8TWL2 Sugar phosphate isomerase/epimerase n=1 Tax=Methanopyrus kandleri RepID=Q8TWL2_METKA Length = 252 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 64/225 (28%), Gaps = 31/225 (13%) Query: 59 YHYTSAQILPHDSYL-INLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS--HLM 115 H + +N P E + + +L L HPG + Sbjct: 48 NELNVEVSSVHAPFADLNPASPSDHHHEYILEVIQRAAELAAELDAHYLTVHPGHLTPVT 107 Query: 116 QISEEDCLARIAESINIALDK--TQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSR 173 E + E++ D+ + GV ++EN LG + + I+ Sbjct: 108 IHDRELAIELAIETLGELADEVRSFGVEPLVENMPDHSLLLGTSADEMEEILRASG---- 163 Query: 174 VGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHS 233 G +D HA A LR +H++D D H Sbjct: 164 CGFTLDVGHALTAEGSLRPYLRL--------------RPDLLHVHDNSGD----GDEHLP 205 Query: 234 LGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278 G G + + R + ++E + E + ++ Sbjct: 206 PGSGILDFEELRRALHHRVLP----VVEVRGIEKAREAVRTVREI 246 >UniRef50_Q12VU1 Xylose isomerase-like TIM barrel-domain protein n=4 Tax=Methanosarcinaceae RepID=Q12VU1_METBU Length = 269 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 34/244 (13%) Query: 50 DEFKAACEKYHYTSAQILPHDSYL-----------INLGHPVTEALEKSRDAFIDEMQRC 98 + + ++ H Y ++ + + ++ Sbjct: 40 NRLEQILDELSTCDLDTSMHAHYFADVPTYPKGLVVDTASMEPIHFK----LMEECIELA 95 Query: 99 EQLGLSLLNFHPGSHLMQISEEDCLARIAESINI--ALDKTQGVTAVIEN-TAGQGSNLG 155 +L + HPG + + L R+ ++ A V +EN A NL Sbjct: 96 GKLETKAVVIHPG--RVGDDRQRSLGRMTTNLKRLAAFASENNVMLGLENKEATDPGNLC 153 Query: 156 FKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGM 215 + E L +++ V+ +GV D HA T + +F RTV + + + Sbjct: 154 CEAEELLKVVNEVDSS-NLGVTFDIGHANL------TCGGDHEKLNEFIRTV-SEQVIHV 205 Query: 216 HLNDAKSTFGSR--VDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA 273 HL+D T+ S D H + G G I + + + GI LE + + Sbjct: 206 HLHDNYGTWTSNYDGDEHMAPGTGTIDYSVLNSL---KGYKGI-FNLEVFSIEDVLAGKE 261 Query: 274 WLKA 277 ++ Sbjct: 262 MIRE 265 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.146 0.415 Lambda K H 0.267 0.0447 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,782,060,417 Number of Sequences: 3077464 Number of extensions: 72627513 Number of successful extensions: 222470 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 601 Number of HSP's successfully gapped in prelim test: 1189 Number of HSP's that attempted gapping in prelim test: 219235 Number of HSP's gapped (non-prelim): 1918 length of query: 285 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 158 effective length of database: 649,558,428 effective search space: 102630231624 effective search space used: 102630231624 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 92 (39.9 bits)