Phyre 2 alignment of P25516 with c1pt1B_

Return to main results | Retrieve Phyre Job Id

Job Description | P25516
Confidence | 12.50% | Date | Thu Jan 5 11:41:52 GMT 2012
Rank | 68 | Aligned Residues | 36
% Identity | 19% | Template | c1pt1B_
PDB info | PDB header:lyase | Chain: B: PDB Molecule:aspartate 1-decarboxylase; | PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 431 | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 470 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | I | T | S | C | T | N | T | S | N | P | S | V | L | M | A | A | G | L | L | A | K | K | A | V | T | L | G | L | K | R | . | . | . | . | . | . | . | Q | P | W | V | K | A | S | L | A | P | G | S | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | E | G | S | C | A | . | . | I | D | Q | D | F | L | D | A | A | G | I | L | . | . | . | . | . | . | E | N | E | A | I | D | I | W | N | V | T | N | G | K | R | F | S | T | Y | A | I | A | A | E | R
Template Known Secondary structure |  | S |  | S | S |  |  | . | . |  |  |  |  |  |  |  |  |  | T |  |  | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 22 | . | . | . | . | . |  |  | . | . | 30 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions