Phyre 2 alignment of P25516 with c2r2dC_

Return to main results | Retrieve Phyre Job Id

Job Description | P25516
Confidence | 12.55% | Date | Thu Jan 5 11:41:52 GMT 2012
Rank | 66 | Aligned Residues | 28
% Identity | 21% | Template | c2r2dC_
PDB info | PDB header:hydrolase | Chain: C: PDB Molecule:zn-dependent hydrolases; | PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | R | E | A | V | K | R | L | G | G | D | T | A | K | V | N | P | L | S | P | V | D | L | V | I | D | H | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | P | E | R | L | R | Q | L | G | L | S | P | D | D | I | S | T | V | V | L | S | H | L | H | N | D | H | A
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  |  | G | G | G |  | S |  |  |  |  | S |  |  | S | T | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions