Phyre 2 alignment of P25516 with d1vjta1

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Job Description | P25516
Confidence | 12.33% | Date | Thu Jan 5 11:41:52 GMT 2012
Rank | 70 | Aligned Residues | 18
% Identity | 28% | Template | d1vjta1
SCOP info | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | LDH N-terminal domain-like
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | G | K | Q | A | F | S | R | F | S | V | V | P | P | G | T | G | I | C | H | Q | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Template Sequence |  | Q | A | V | R | R | W | T | G | A | N | I | V | . | . | . | . | G | F | C | H | G | V
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  |  |  |  | . | . | . | . |  |  |  |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 167 | . | . | 170 | . | . | . | . | . | . | . | . |  |  |  |  | . | 180 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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