Phyre 2 Results for P25516

Email | l.a.kelley@imperial.ac.uk
Description | P25516
Date | Thu Jan 5 11:41:52 GMT 2012
Unique Job ID | b6ee1aed79cad8cc

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2b3yB_ |
|  | 100.0 | 52 | PDB header:lyase Chain: B: PDB Molecule:iron-responsive element binding protein 1; PDBTitle: structure of a monoclinic crystal form of human cytosolic aconitase2 (irp1)
2 | c5acnA_ |
|  | 100.0 | 29 | PDB header:lyase(carbon-oxygen) Chain: A: PDB Molecule:aconitase; PDBTitle: structure of activated aconitase. formation of the (4fe-4s)2 cluster in the crystal
3 | d2b3ya2 |
|  | 100.0 | 52 | Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain
4 | d1acoa2 |
|  | 100.0 | 29 | Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain
5 | d1l5ja3 |
|  | 100.0 | 23 | Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain
6 | c1l5jB_ |
|  | 100.0 | 22 | PDB header:lyase Chain: B: PDB Molecule:aconitate hydratase 2; PDBTitle: crystal structure of e. coli aconitase b.
7 | d2b3ya1 |
|  | 100.0 | 54 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like
8 | d1acoa1 |
|  | 100.0 | 28 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like
9 | d1v7la_ |
|  | 100.0 | 35 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like
10 | c2pkpA_ |
|  | 100.0 | 31 | PDB header:lyase Chain: A: PDB Molecule:homoaconitase small subunit; PDBTitle: crystal structure of 3-isopropylmalate dehydratase (leud)2 from methhanocaldococcus jannaschii dsm2661 (mj1271)
11 | d1l5ja2 |
|  | 100.0 | 20 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like
12 | c2hcuA_ |
|  | 100.0 | 25 | PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: crystal structure of smu.1381 (or leud) from streptococcus2 mutans
13 | c3q3wB_ |
|  | 100.0 | 23 | PDB header:transferase Chain: B: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: isopropylmalate isomerase small subunit from campylobacter jejuni.
14 | c3h5jA_ |
|  | 100.0 | 27 | PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from2 mycobacterium tuberculosis
15 | d1cf1a1 |
|  | 71.8 | 14 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like
16 | d1g4ma1 |
|  | 69.4 | 28 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like
17 | d2r4qa1 |
|  | 63.9 | 35 | Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like
18 | c3c52B_ |
|  | 59.5 | 30 | PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor
19 | c2iswB_ |
|  | 54.4 | 28 | PDB header:lyase Chain: B: PDB Molecule:putative fructose-1,6-bisphosphate aldolase; PDBTitle: structure of giardia fructose-1,6-biphosphate aldolase in2 complex with phosphoglycolohydroxamate
20 | d1t3va_ |
|  | 43.3 | 11 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:MTH1175-like
21 | d1rdua_ |
| not modelled | 40.8 | 15 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:MTH1175-like
22 | c3elfA_ |
| not modelled | 40.2 | 24 | PDB header:lyase Chain: A: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: structural characterization of tetrameric mycobacterium tuberculosis2 fructose 1,6-bisphosphate aldolase - substrate binding and catalysis3 mechanism of a class iia bacterial aldolase
23 | d1dosa_ |
| not modelled | 34.8 | 38 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
24 | d2r48a1 |
| not modelled | 31.6 | 39 | Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like
25 | d1p90a_ |
| not modelled | 29.5 | 16 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:Nitrogenase accessory factor
26 | d1o13a_ |
| not modelled | 26.4 | 13 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:MTH1175-like
27 | c2gp4A_ |
| not modelled | 25.2 | 14 | PDB header:lyase Chain: A: PDB Molecule:6-phosphogluconate dehydratase; PDBTitle: structure of [fes]cluster-free apo form of 6-phosphogluconate2 dehydratase from shewanella oneidensis
28 | c2yx6C_ |
| not modelled | 24.7 | 15 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein ph0822; PDBTitle: crystal structure of ph0822
29 | d1o60a_ |
| not modelled | 23.7 | 16 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase
30 | c3bolB_ |
| not modelled | 23.7 | 21 | PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
31 | c3qm3C_ |
| not modelled | 23.6 | 23 | PDB header:lyase Chain: C: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: 1.85 angstrom resolution crystal structure of fructose-bisphosphate2 aldolase (fba) from campylobacter jejuni
32 | c2wbrA_ |
| not modelled | 23.5 | 31 | PDB header:dna-binding protein Chain: A: PDB Molecule:gw182; PDBTitle: the rrm domain in gw182 proteins contributes to mirna-2 mediated gene silencing
33 | c3q94B_ |
| not modelled | 23.0 | 28 | PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase, class ii; PDBTitle: the crystal structure of fructose 1,6-bisphosphate aldolase from2 bacillus anthracis str. 'ames ancestor'
34 | c3l2iB_ |
| not modelled | 22.7 | 15 | PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.
35 | d1gvfa_ |
| not modelled | 22.5 | 21 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
36 | d1t0tv_ |
| not modelled | 22.3 | 23 | Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Chlorite dismutase-like
37 | d1rvga_ |
| not modelled | 21.4 | 29 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
38 | c3iz5Q_ |
| not modelled | 19.9 | 22 | PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein l5 (l18p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
39 | c2rhbD_ |
| not modelled | 19.8 | 33 | PDB header:viral protein Chain: D: PDB Molecule:uridylate-specific endoribonuclease; PDBTitle: crystal structure of nsp15-h234a mutant- hexamer in2 asymmetric unit
40 | d3bofa2 |
| not modelled | 19.4 | 19 | Fold:TIM beta/alpha-barrel Superfamily:Homocysteine S-methyltransferase Family:Homocysteine S-methyltransferase
41 | d1iuka_ |
| not modelled | 19.2 | 20 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
42 | c2kyrA_ |
| not modelled | 19.1 | 24 | PDB header:transferase Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1; PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544
43 | c2wfbA_ |
| not modelled | 18.7 | 19 | PDB header:biosynthetic protein Chain: A: PDB Molecule:putative uncharacterized protein orp; PDBTitle: high resolution structure of the apo form of the orange2 protein (orp) from desulfovibrio gigas
44 | d1vdha_ |
| not modelled | 18.7 | 18 | Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Chlorite dismutase-like
45 | d2aioa1 |
| not modelled | 18.4 | 19 | Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Zn metallo-beta-lactamase
46 | d1eo1a_ |
| not modelled | 17.4 | 22 | Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:MTH1175-like
47 | c3c3jA_ |
| not modelled | 16.7 | 10 | PDB header:isomerase Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase; PDBTitle: crystal structure of tagatose-6-phosphate ketose/aldose isomerase from2 escherichia coli
48 | c3dmyA_ |
| not modelled | 16.3 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein fdra; PDBTitle: crystal structure of a predicated acyl-coa synthetase from e.coli
49 | d1eg7a_ |
| not modelled | 16.1 | 19 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like
50 | c3l4gI_ |
| not modelled | 16.0 | 33 | PDB header:ligase Chain: I: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: crystal structure of homo sapiens cytoplasmic phenylalanyl-trna2 synthetase
51 | d2ghra1 |
| not modelled | 16.0 | 19 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:HTS-like
52 | c2yrvA_ |
| not modelled | 15.8 | 24 | PDB header:transcription Chain: A: PDB Molecule:at-rich interactive domain-containing protein 4a; PDBTitle: solution structure of the rbb1nt domain of human2 rb(retinoblastoma)-binding protein 1
53 | c2oxlA_ |
| not modelled | 15.2 | 14 | PDB header:gene regulation Chain: A: PDB Molecule:hypothetical protein ymgb; PDBTitle: structure and function of the e. coli protein ymgb: a protein critical2 for biofilm formation and acid resistance
54 | d2ac7a1 |
| not modelled | 15.1 | 17 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
55 | d2gp4a2 |
| not modelled | 14.9 | 12 | Fold:IlvD/EDD N-terminal domain-like Superfamily:IlvD/EDD N-terminal domain-like Family:lvD/EDD N-terminal domain-like
56 | d2ieaa3 |
| not modelled | 14.6 | 29 | Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Transketolase C-terminal domain-like
57 | d2zdra1 |
| not modelled | 14.0 | 23 | Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain
58 | d1jjca_ |
| not modelled | 13.9 | 21 | Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
59 | c2vxhF_ |
| not modelled | 13.7 | 9 | PDB header:oxidoreductase Chain: F: PDB Molecule:chlorite dismutase; PDBTitle: the crystal structure of chlorite dismutase: a detox enzyme2 producing molecular oxygen
60 | c3cf4A_ |
| not modelled | 13.6 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex
61 | c3qpbB_ |
| not modelled | 13.5 | 21 | PDB header:transferase Chain: B: PDB Molecule:uridine phosphorylase; PDBTitle: crystal structure of streptococcus pyogenes uridine phosphorylase2 reveals a subclass of the np-i superfamily
62 | c2o8vA_ |
| not modelled | 13.1 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoadenosine phosphosulfate reductase; PDBTitle: paps reductase in a covalent complex with thioredoxin c35a
63 | c3mwbA_ |
| not modelled | 13.1 | 15 | PDB header:lyase Chain: A: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of prephenate dehydratase in complex with l-phe2 from arthrobacter aurescens to 2.0a
64 | c2jz2A_ |
| not modelled | 13.0 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ssl0352 protein; PDBTitle: solution nmr structure of ssl0352 protein from synechocystis sp. pcc2 6803. northeast structural genomics consortium target sgr42
65 | d1k6ka_ |
| not modelled | 12.9 | 25 | Fold:Double Clp-N motif Superfamily:Double Clp-N motif Family:Double Clp-N motif
66 | c2r2dC_ |
| not modelled | 12.5 | 21 | PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens
67 | c2w9mB_ |
| not modelled | 12.5 | 35 | PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans
68 | c1pt1B_ |
| not modelled | 12.5 | 19 | PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine
69 | c2ebbA_ |
| not modelled | 12.4 | 18 | PDB header:lyase Chain: A: PDB Molecule:pterin-4-alpha-carbinolamine dehydratase; PDBTitle: crystal structure of pterin-4-alpha-carbinolamine2 dehydratase (pterin carbinolamine dehydratase) from3 geobacillus kaustophilus hta426
70 | d1vjta1 |
| not modelled | 12.3 | 28 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like
71 | d1ppya_ |
| not modelled | 11.6 | 19 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Pyruvoyl dependent aspartate decarboxylase, ADC
72 | d1vhwa_ |
| not modelled | 11.5 | 20 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
73 | c1z34A_ |
| not modelled | 11.5 | 18 | PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of trichomonas vaginalis purine nucleoside2 phosphorylase complexed with 2-fluoro-2'-deoxyadenosine
74 | c3nn4C_ |
| not modelled | 11.3 | 9 | PDB header:oxidoreductase Chain: C: PDB Molecule:chlorite dismutase; PDBTitle: structure of chlorite dismutase from candidatus nitrospira defluvii2 r173k mutant
75 | c2gacD_ |
| not modelled | 11.2 | 30 | PDB header:hydrolase Chain: D: PDB Molecule:glycosylasparaginase; PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
76 | d1lt7a_ |
| not modelled | 10.9 | 20 | Fold:TIM beta/alpha-barrel Superfamily:Homocysteine S-methyltransferase Family:Homocysteine S-methyltransferase
77 | d1p9ea_ |
| not modelled | 10.9 | 19 | Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Methyl parathion hydrolase
78 | c1p9eA_ |
| not modelled | 10.9 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:methyl parathion hydrolase; PDBTitle: crystal structure analysis of methyl parathion hydrolase from2 pseudomonas sp wbc-3
79 | d1ybfa_ |
| not modelled | 10.9 | 20 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
80 | c2kmfA_ |
| not modelled | 10.7 | 28 | PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii 11 kda protein; PDBTitle: solution structure of psb27 from cyanobacterial photosystem2 ii
81 | c1b70A_ |
| not modelled | 10.7 | 21 | PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase; PDBTitle: phenylalanyl trna synthetase complexed with phenylalanine
82 | c3do6B_ |
| not modelled | 10.6 | 18 | PDB header:ligase Chain: B: PDB Molecule:formate--tetrahydrofolate ligase; PDBTitle: crystal structure of putative formyltetrahydrofolate2 synthetase (tm1766) from thermotoga maritima at 1.85 a3 resolution
83 | d1hyua4 |
| not modelled | 10.6 | 23 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
84 | d1uf2c1 |
| not modelled | 10.4 | 21 | Fold:A virus capsid protein alpha-helical domain Superfamily:A virus capsid protein alpha-helical domain Family:Phytoreovirus capsid
85 | d1je0a_ |
| not modelled | 10.4 | 20 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
86 | c3fz5C_ |
| not modelled | 10.3 | 14 | PDB header:isomerase Chain: C: PDB Molecule:possible 2-hydroxychromene-2-carboxylate isomerase; PDBTitle: crystal structure of possible 2-hydroxychromene-2-carboxylate2 isomerase from rhodobacter sphaeroides
87 | d1umya_ |
| not modelled | 10.3 | 20 | Fold:TIM beta/alpha-barrel Superfamily:Homocysteine S-methyltransferase Family:Homocysteine S-methyltransferase
88 | c2nu8D_ |
| not modelled | 10.2 | 18 | PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase
89 | c1p0yA_ |
| not modelled | 10.1 | 18 | PDB header:transferase Chain: A: PDB Molecule:ribulose-1,5 bisphosphate carboxylase/oxygenase PDBTitle: crystal structure of the set domain of lsmt bound to2 melysine and adohcy
90 | c3r2nC_ |
| not modelled | 9.9 | 26 | PDB header:hydrolase Chain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae
91 | d3c8ya1 |
| not modelled | 9.8 | 17 | Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase
92 | d2pt0a1 |
| not modelled | 9.8 | 13 | Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA
93 | c2v4oB_ |
| not modelled | 9.6 | 29 | PDB header:hydrolase Chain: B: PDB Molecule:multifunctional protein sur e; PDBTitle: crystal structure of salmonella typhimurium sure at 2.752 angstrom resolution in monoclinic form
94 | c3bjeA_ |
| not modelled | 9.1 | 19 | PDB header:transferase Chain: A: PDB Molecule:nucleoside phosphorylase, putative; PDBTitle: crystal structure of trypanosoma brucei nucleoside phosphorylase shows2 uridine phosphorylase activity
95 | d1th7a1 |
| not modelled | 9.1 | 23 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
96 | c3oqhB_ |
| not modelled | 8.9 | 20 | PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein yvmc; PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic
97 | c2phjA_ |
| not modelled | 8.9 | 31 | PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of sure protein from aquifex aeolicus
98 | c3bl5E_ |
| not modelled | 8.9 | 19 | PDB header:hydrolase Chain: E: PDB Molecule:queuosine biosynthesis protein quec; PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis
99 | d1pvda3 |
| not modelled | 8.7 | 23 | Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module