Phyre 2 alignment of P25516 with d1th7a1

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Job Description | P25516
Confidence | 9.11% | Date | Thu Jan 5 11:41:52 GMT 2012
Rank | 95 | Aligned Residues | 35
% Identity | 23% | Template | d1th7a1
SCOP info | Sm-like fold | Sm-like ribonucleoproteins | Sm motif of small nuclear ribonucleoproteins, SNRNP
Resolution | 1.68

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | V | N | L | E | Y | L | G | K | A | V | W | S | E | L | Q | D | G | E | W | I | A | Y | P | D | T | L | V | G | T | D | S | H | T | T | M | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | V | L | A | E | S | L | N | N | L | V | L | V | K | L | K | G | N | K | E | V | R | . | . | G | M | L | R | S | Y | D | Q | H | M | N | L | V
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T | T |  |  |  |  | . | . |  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |  |  | . | . | . | . | . | . | 40 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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