Phyre 2 alignment of P25516 with d1g4ma1

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Job Description | P25516
Confidence | 69.44% | Date | Thu Jan 5 11:41:52 GMT 2012
Rank | 16 | Aligned Residues | 29
% Identity | 28% | Template | d1g4ma1
SCOP info | Immunoglobulin-like beta-sandwich | E set domains | Arrestin/Vps26-like
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 790 | . | . | . | . | . | . | . | . | . |  | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | R | V | V | I | A | E | S | F | E | . | R | I | H | R | S | N | L | I | G | M | G | I | L | P | L | E | F | P | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | K | A | F | C | A | E | N | L | E | E | K | I | H | K | R | N | S | V | R | L | V | I | R | K | V | Q | Y | A | P
Template Known Secondary structure |  |  |  |  |  |  |  | S | S | T | T | S |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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