311 c3rfaA_ Probab=27.77   E-value=44  Score=14.40  Aligned_columns=82  Identities=16%

Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999998747998999866888442367798875037989986312875465004228989999999999999996698
Q batch____        91 AHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGM  170 (359)
Q Consensus        91 ~~~~~~~A~~~~VPValHLDHg~~~~le~i~~~i~~g~e~~~~ai~~GFtSVMiDgS~lpfeENI~~Tk~vve~Ah~~gv  170 (359)
                      ...+..+++...+-+++.|+..+++.                      +..+|==....|+++-++..++..+.....|+
T Consensus       200 ~~~i~~L~~~~~~~l~isl~a~~~e~----------------------r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~  257 (333)
T c3rfaA_         200 VPALDKLGDMIDVALAISLHAPNDEI----------------------RDEIVPINKKYNIETFLAAVRRYLEKSNANQG  257 (333)
T ss_dssp             HHHHHHHHHHCCCEEEEECCCSSHHH----------------------HHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTT
T ss_pred             HHHHHHHHHHCCCEEEECCCCCCHHH----------------------HHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             17899987315848998067798778----------------------62314067888999999999999997764398


Q ss_pred             EEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             389886320576555444554332225789998899999998
Q batch____       171 TLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSK  212 (359)
Q Consensus       171 sVEaELG~vgG~Ed~~~~~~~~~~~~yT~PeeA~~~~~~Fv~  212 (359)
                      .|..|.--++|..|              +++++    +++++
T Consensus       258 ~v~i~y~li~g~nD--------------s~e~a----~~l~~  281 (333)
T c3rfaA_         258 RVTIEYVMLDHVND--------------GTEHA----HQLAE  281 (333)
T ss_dssp             CEEEEEEEBTTTTC--------------SHHHH----HHHHH
T ss_pred             EEEEEEEECCCCCC--------------CHHHH----HHHHH
T ss_conf             08998554089998--------------98999----99999