Phyre 2 alignment of P76577 with c2yrlA_

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Job Description | P76577
Confidence | 49.83% | Date | Thu Jan 5 12:24:46 GMT 2012
Rank | 158 | Aligned Residues | 51
% Identity | 18% | Template | c2yrlA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:kiaa1837 protein; | PDBTitle: solution structure of the pkd domain from kiaa 1837 protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 719 | 720 | . | . | . | . | . | . | . |  | . | . | 730 | . |  |  |  |  | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . |  |  | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | G | G | A | G | E | R | W | W | . | F | L | N | G | . | . | . | . | E | P | L | T | E | R | G | R | N | V | T | L | H | L | T | D | K | G | D | Y | . | . | Q | L | L | V | M | D | D | V | G | Q | I | A | T | V | K | F | V | M
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | Q | K | I | I | S | Y | L | W | E | K | T | Q | G | P | D | G | V | Q | L | E | N | A | N | S | S | V | A | T | V | T | G | L | Q | V | G | T | Y | V | F | T | L | T | V | K | D | E | R | N | L | Q | S | Q | S | S | V | N | V
Template Known Secondary structure |  | S | S |  | B |  |  |  |  |  |  |  |  |  | S |  | T | T |  |  |  |  | S | T | T | S | S |  |  |  |  |  | S |  |  | S | S |  |  |  |  |  |  |  |  |  | B | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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