 |
| Job Description | A5A621 | | Confidence | 1.98% | Date | Wed Jan 25 15:20:03 GMT 2012 |
| Rank | 67 | Aligned Residues | 19 |
| % Identity | 21% | Template | c1qceB_ |
| PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:protein (gp41); |
PDBTitle: solution nmr structure of ectodomain of siv gp41,2 restrained regularized mean structure plus 29 simulated3 annealing structures
|
| Resolution | UNK |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 |
| Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | E | R | E | L | G | N | W | K | D | F | I | E | V | M | L | R | K | X |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|
|
| Template Sequence |   |
W | E | R | K | V | D | F | L | E | E | N | I | T | A | L | L | E | E | A |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|