Phyre 2 alignment of P0A7R5 with c3lpeF_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A7R5
Confidence | 6.37% | Date | Thu Jan 5 11:06:06 GMT 2012
Rank | 29 | Aligned Residues | 16
% Identity | 38% | Template | c3lpeF_
PDB info | PDB header:transferase | Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; | PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | T | A | K | R | T | G | A | Q | V | R | G | P | I | P | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | I | A | K | K | A | G | I | D | I | K | G | K | Y | A | L
Template Known Secondary structure |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions