10/01/2012 09:30:18 : INFO  : Run start: Tue Jan 10 09:30:17 GMT 2012
10/01/2012 09:30:19 : INFO  : Initialised job
10/01/2012 09:30:20 : INFO  : Renaming log file 'phyre2_20120110_093017.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b5776b7bd06f9eaa/phyre_20120110_093017.log'
10/01/2012 09:30:20 : INFO  : Initialised job:
Sequence
>batch____
MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD
ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG

10/01/2012 09:30:21 : INFO  : Checked sequence
10/01/2012 09:30:22 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 09:30:22 : INFO  : PSI-BLAST 3 iterations
10/01/2012 09:31:08 : INFO  : PSI-BLAST 5 iterations
10/01/2012 09:32:08 : INFO  : Finished PSI-BLAST
10/01/2012 09:32:08 : INFO  : Running Buildali to generate a3m file
10/01/2012 09:35:04 : INFO  : Converting to HMM
10/01/2012 09:35:05 : INFO  : Calibrating HMM
10/01/2012 09:35:10 : INFO  : Searching HMM database
10/01/2012 09:37:48 : INFO  : Finished buildali
10/01/2012 09:37:49 : INFO  : Predicting secondary structure
10/01/2012 09:37:51 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 09:37:52 : INFO  : Predicting Disordered regions
10/01/2012 09:37:53 : INFO  : Predicted Disorder (Disopred)
10/01/2012 09:37:53 : INFO  : Running memsat_svm check
10/01/2012 09:40:23 : INFO  : Running memsat_svm full
10/01/2012 09:45:57 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b5776b7bd06f9eaa'
10/01/2012 09:45:58 : INFO  : Initialising fold library search
10/01/2012 09:45:59 : INFO  : Initialised search input
10/01/2012 09:46:00 : INFO  : Building Ensemble models
10/01/2012 09:46:02 : INFO  : Building hh.d2qalj1.model.1.pdb
10/01/2012 09:46:09 : INFO  : Building d2qalj1.1.pdb
10/01/2012 09:46:16 : INFO  : Building c3bbnJ_.2.pdb
10/01/2012 09:46:23 : INFO  : Building d2uubj1.3.pdb
10/01/2012 09:46:30 : INFO  : Building c2xznJ_.4.pdb
10/01/2012 09:46:37 : INFO  : Building c2zkqj_.5.pdb
10/01/2012 09:46:43 : INFO  : Building c1s1hJ_.6.pdb
10/01/2012 09:46:50 : INFO  : Building c3iz6J_.7.pdb
10/01/2012 09:46:57 : INFO  : Building c3r2cJ_.8.pdb
10/01/2012 09:47:07 : INFO  : Building d1xbpg1.9.pdb
10/01/2012 09:47:14 : INFO  : Building d1fnoa3.10.pdb
10/01/2012 09:47:21 : INFO  : Building d1hc8a_.11.pdb
10/01/2012 09:47:27 : INFO  : Building d1mmsa1.12.pdb
10/01/2012 09:47:33 : INFO  : Building c1s1iK_.13.pdb
10/01/2012 09:47:39 : INFO  : Building c1vq8I_.14.pdb
10/01/2012 09:47:46 : INFO  : Building d1dbda_.15.pdb
10/01/2012 09:47:53 : INFO  : Building c2kl8A_.16.pdb
10/01/2012 09:48:00 : INFO  : Building c2zkri_.17.pdb
10/01/2012 09:48:07 : INFO  : Building c1s6xA_.18.pdb
10/01/2012 09:48:12 : INFO  : Building c2yqrA_.19.pdb
10/01/2012 09:48:18 : INFO  : Building c1jqmA_.20.pdb
10/01/2012 09:48:32 : INFO  : Finished HH model building
10/01/2012 09:48:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 09:49:08 : INFO  : html domain output complete ID 'b5776b7bd06f9eaa'
10/01/2012 09:51:58 : INFO  : Run end  : Tue Jan 10 09:51:57 GMT 2012
