Phyre 2 alignment of P0A7R5 with c2xdyA_

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Job Description | P0A7R5
Confidence | 3.59% | Date | Thu Jan 5 11:06:06 GMT 2012
Rank | 47 | Aligned Residues | 28
% Identity | 21% | Template | c2xdyA_
PDB info | PDB header:rna binding protein | Chain: A: PDB Molecule:post-transcriptional gene silencing protein qde-2; | PDBTitle: crystal structure of the n. crassa qde-2 ago mid domain
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | F | D | H | R | L | I | D | Q | A | T | A | E | I | V | E | T | A | K | R | T | G | A | Q | V | R | G | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | K | A | N | E | G | V | P | Q | A | M | T | A | F | A | E | F | L | N | R | T | G | I | P | I | N | P | R
Template Known Secondary structure |  | S | S |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | B |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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