 |
| Job Description | P0A7R5 | | Confidence | 3.59% | Date | Thu Jan 5 11:06:06 GMT 2012 |
| Rank | 47 | Aligned Residues | 28 |
| % Identity | 21% | Template | c2xdyA_ |
| PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:post-transcriptional gene silencing protein qde-2; |
PDBTitle: crystal structure of the n. crassa qde-2 ago mid domain
|
| Resolution | 2.20 Å |
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | F | D | H | R | L | I | D | Q | A | T | A | E | I | V | E | T | A | K | R | T | G | A | Q | V | R | G | P |
| Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
| Template Sequence |   |
S | K | A | N | E | G | V | P | Q | A | M | T | A | F | A | E | F | L | N | R | T | G | I | P | I | N | P | R |
| Template Known Secondary structure |   |
S | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| S |
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|