12 d1k8qa_ Probab=99.84   E-value=5.7e-20  Score=124.02  Aligned_columns=176  Identities=16%

Q ss_pred             EEEECCCCCCCCCH----HHHHHHHHHHHCCCCEECCCCCCCCCC----------------------HHHHHHHHHHHHH
Q ss_conf             89971899988880----799999997757995403682111122----------------------8999999999998
Q batch____         2 IIYLHGFDSNSPGN----HEKVLQLQFIDPDVRLISYSTRHPKHD----------------------MQHLLKEVDKMLQ   55 (180)
Q Consensus         2 ii~lHG~~~~~~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~   55 (180)
                      ||++||+.+|+..+    ..+.++..|...|+.++.+|.|+.+.+                      .+++...++.+.+
T Consensus        61 vlllHG~~~~~~~~~~~~~~~~la~~l~~~Gy~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~  140 (377)
T d1k8qa_          61 AFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILK  140 (377)
T ss_dssp             EEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999787897786403420106899997798799937788999988878888828774248899899889999999999


Q ss_pred             HCCCCCEEEEECCHHHHHHHHHHHHHCCCC------EEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH----------
Q ss_conf             529997899961868999999999725763------1540333506776665215665110245555665----------
Q batch____        56 LNVDERPLICGVGLGGYWAERIGFLCDIRQ------VIFNPNLFPYENMEGKIDRPEEYADIATKCVTNF----------  119 (180)
Q Consensus        56 ~~~~~~i~l~G~S~GG~~A~~la~~~~~~~------~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  119 (180)
                      ..+.++++|+||||||.+|+.++..+|+.+      +.++|+..+.........................          
T Consensus       141 ~~g~~ki~lvGHS~Gg~ia~~~a~~~P~~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (377)
T d1k8qa_         141 KTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQ  220 (377)
T ss_dssp             HHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHH
T ss_pred             HCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCHHHHH
T ss_conf             67998199997454579999999968662112122111034446653220133320132467765212100023058999


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____       120 --------------------------------------------------------------------------------  119 (180)
Q Consensus       120 --------------------------------------------------------------------------------  119 (180)
                                                                                                      
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (377)
T d1k8qa_         221 FLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYH  300 (377)
T ss_dssp             HHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHS
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             88640144211103455555542047733379999998763103665189999999984044113332113445666516


Q ss_pred             --------HHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC---CEEEECCCCC-----CCCCHHHHHHHHHHHH
Q ss_conf             --------53024854899618887027999999986149---6999869998-----8479799999998530
Q batch____       120 --------REKNRDRCLVILSRNDEALNSQRTSEELHHYY---EIVWDEEQTH-----KFKNISPHLQRIKAFK  177 (180)
Q Consensus       120 --------~~~~~~p~lii~g~~D~~v~~~~~~~~~~~~~---~l~~~~~g~H-----~f~~~~~~l~~i~~F~  177 (180)
                              ..++..|+++++|++|.++|.+.+.++.+...   +++.+++++|     +-+..++..+.|.+|+
T Consensus       301 ~~~~~~~~l~~i~vPvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~l~~~~~~~~v~~~i~~fL  374 (377)
T d1k8qa_         301 QSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM  374 (377)
T ss_dssp             SSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHH
T ss_pred             CCCCCHHHHHHCCCCEEEEEECCCCEECHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf             66752025762899889999578831379999999997899729999788984001103320799999999986