BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (241 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobact... 498 e-140 UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter... 255 1e-66 UniRef50_UPI0001913450 putative regulatory protein n=1 Tax=Salmo... 224 1e-57 UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa... 68 3e-10 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A6V170 Probable two-component response regulator n=1 Ta... 57 7e-07 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 56 8e-07 UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersini... 56 1e-06 UniRef50_UPI000197BDC0 two component LuxR family transcriptional... 55 2e-06 UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa... 55 2e-06 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 55 3e-06 UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat... 54 3e-06 UniRef50_B6VKY7 Pvp response regulator (Two-component response r... 54 3e-06 UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR fa... 54 5e-06 UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=... 53 8e-06 UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa... 53 9e-06 UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Provide... 53 1e-05 UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR fa... 53 1e-05 UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12... 52 2e-05 UniRef50_B4ELF5 Two-component regulatory system, response regula... 52 2e-05 UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=... 52 2e-05 UniRef50_B4STE5 Two component transcriptional regulator, LuxR fa... 51 3e-05 UniRef50_C3K5C3 Putative response regulator, receiver domain n=1... 51 3e-05 UniRef50_Q2T904 Capsula synthesis response regulator transcripti... 51 4e-05 UniRef50_Q1LG72 Two component transcriptional regulator, LuxR fa... 50 5e-05 UniRef50_Q2L102 Putative two-component response regulator of cap... 50 5e-05 UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ... 50 6e-05 UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ... 50 7e-05 UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa... 50 8e-05 UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR fa... 50 8e-05 UniRef50_C4SZW9 DNA-binding HTH domain-containing protein n=2 Ta... 50 8e-05 UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=S... 50 9e-05 UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 ... 49 2e-04 UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, par... 49 2e-04 UniRef50_Q145Q9 Two component transcriptional regulator, LuxR fa... 49 2e-04 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 48 2e-04 UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa... 48 2e-04 UniRef50_A4TP15 LuxR-family regulatory protein n=31 Tax=Yersinia... 48 3e-04 UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_C4U6W8 LuxR-family regulatory protein n=1 Tax=Yersinia ... 48 3e-04 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 48 4e-04 UniRef50_UPI00016A3B5C two component transcriptional regulator, ... 47 4e-04 UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece... 47 5e-04 UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C... 47 5e-04 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_A8G883 Transcriptional regulator, LuxR family n=1 Tax=S... 47 6e-04 UniRef50_D2TRD6 LuxR-family transcriptional regulator n=1 Tax=Ci... 47 6e-04 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 47 6e-04 UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10... 47 6e-04 UniRef50_B4SIR4 Two component transcriptional regulator, LuxR fa... 47 7e-04 UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ... 46 9e-04 UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin... 46 0.001 UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa... 46 0.001 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 45 0.002 UniRef50_D2TK25 Putative response regulator n=1 Tax=Citrobacter ... 45 0.002 UniRef50_B8DKC1 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_B1T388 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25... 45 0.003 UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa... 45 0.003 UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=... 45 0.003 UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece... 44 0.003 UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=... 44 0.003 UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=S... 44 0.005 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 44 0.005 UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta... 44 0.005 UniRef50_B2VL70 Putative uncharacterized protein n=1 Tax=Erwinia... 44 0.006 UniRef50_UPI0001C33E7F two component LuxR family transcriptional... 44 0.006 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 44 0.007 UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR fa... 43 0.007 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 43 0.007 UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Ente... 43 0.008 UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular... 43 0.008 UniRef50_Q21TB2 Transcriptional regulator, LuxR family n=1 Tax=R... 43 0.008 UniRef50_B2U714 Two component transcriptional regulator, LuxR fa... 43 0.008 UniRef50_A7FGF4 Transcriptional regulator, LuxR family n=26 Tax=... 43 0.009 UniRef50_A6C9W9 Two component transcriptional regulator, LuxR fa... 43 0.011 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 43 0.011 UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ... 43 0.012 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 42 0.013 UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=... 42 0.015 UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Ente... 42 0.015 UniRef50_B5MPU1 Transcriptional regulator, LuxR family n=30 Tax=... 42 0.015 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 42 0.016 UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei... 42 0.016 UniRef50_Q7NVE2 Capsula synthesis response regulator transcripti... 42 0.018 UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa... 42 0.019 UniRef50_B2JLH9 Two component transcriptional regulator, LuxR fa... 42 0.019 UniRef50_B5WJ97 Two component transcriptional regulator, LuxR fa... 42 0.020 UniRef50_A9VZM9 PAS sensor protein n=1 Tax=Methylobacterium exto... 42 0.020 UniRef50_C4SF83 Response regulator containing a CheY-like receiv... 42 0.021 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 42 0.022 UniRef50_C4SVX3 Response regulator containing a CheY-like receiv... 42 0.023 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 42 0.024 UniRef50_A8ADM1 Putative uncharacterized protein n=1 Tax=Citroba... 42 0.024 UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa... 42 0.025 UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa... 41 0.028 UniRef50_B1XXC0 Two component transcriptional regulator, LuxR fa... 41 0.043 UniRef50_A8G0P8 Two component transcriptional regulator, LuxR fa... 41 0.044 UniRef50_UPI00018267FE transcriptional regulator, LuxR family pr... 41 0.045 UniRef50_C5BZU7 Two component transcriptional regulator, LuxR fa... 40 0.046 UniRef50_B3RBW3 Response regulator in two-component regulatory s... 40 0.047 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 40 0.047 UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=... 40 0.049 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 40 0.057 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 40 0.058 UniRef50_B8IGH6 Two component transcriptional regulator, LuxR fa... 40 0.065 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 40 0.068 UniRef50_B1T3D0 Two component transcriptional regulator, LuxR fa... 40 0.068 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 40 0.071 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 40 0.078 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 40 0.086 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 40 0.098 UniRef50_UPI00016AF7F9 capsular synthesis regulator component B ... 40 0.098 >UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobacteriaceae RepID=YJJQ_ECO57 Length = 241 Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust. Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA Sbjct: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK Sbjct: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK Sbjct: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH Sbjct: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 Query: 241 S 241 S Sbjct: 241 S 241 >UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter RepID=C9XUX8_CROTZ Length = 238 Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 126/231 (54%), Positives = 165/231 (71%), Gaps = 1/231 (0%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPG CK GI+IS+IPV+ GL +M HFPE E+ S+ D+TL L +V+A+L Sbjct: 1 MLPGRCKQGIIISQIPVVHTGLAAIMSRHFPETELYHYNSSADITLPLLNPVDMVLAELP 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 E+ R CE YYSL++Q +HW+F+V + +S AV+LLM P TLLS EP+E +V Sbjct: 61 CAPEEARRECEAYYSLVAQAPGVHWIFLVPAASFSMAVQLLMRPETTLLSTAEPVEGVVN 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 V+ G AER+S ML +P + + + +V+LT SE++VLRLLGKGWGINQIA +LKK Sbjct: 121 AVQLGREKAERVSQMLVTPRQAQEKEPAA-AVMLTTSEKQVLRLLGKGWGINQIAQMLKK 179 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNT 231 SNKTISAQKNSAMRRL++ NAEMYAWI+S QG +ELNL S++ + AEWNT Sbjct: 180 SNKTISAQKNSAMRRLSLRGNAEMYAWISSLQGLKELNLLSLHKEQAEWNT 230 >UniRef50_UPI0001913450 putative regulatory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. M223 RepID=UPI0001913450 Length = 208 Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 107/193 (55%), Positives = 143/193 (74%), Gaps = 7/193 (3%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPGCCKNG++ISK P++Q GLK + +FP+Y++ + E+LTLLQLRRS LVIADLA Sbjct: 1 MLPGCCKNGLIISKTPLIQEGLKGAITGNFPDYKLAYCRTIEELTLLQLRRSNLVIADLA 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + PR++CE++YSLISQYR+IHWVF+V +S Y AV+LLM P +TLLSD EPIENL+ Sbjct: 61 VNNASPRAICEYFYSLISQYRDIHWVFLVPKSCYPHAVDLLMGPVSTLLSDEEPIENLIS 120 Query: 121 TVRSGNTHAERISAMLTSPA----MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 + +GN +ERIS L SP + ++HD R ++LTLSERKVLRLLGKGW + ++ Sbjct: 121 VIHAGNARSERISKTLLSPQVPSEIQQSHD---RPIVLTLSERKVLRLLGKGWALTKLRR 177 Query: 177 LLKKSNKTISAQK 189 LKK K ++ +K Sbjct: 178 YLKKVIKQLAPKK 190 >UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM Length = 226 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 11/108 (10%) Query: 113 EPIENLVKTVRSGNTHAERISAMLTSPA-------MTETHDFSYRS----VILTLSERKV 161 EP+E+LVK VR A R++++L + A + + + R+ V LTL ER+V Sbjct: 116 EPLEHLVKVVREVARGAHRVNSLLDAEAGAYHAASVATAKNGTSRACQAPVTLTLREREV 175 Query: 162 LRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 LR G ++ IA+ ++S KTIS QK SA R+L I ++ E+YA ++ Sbjct: 176 LRCFATGMSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVD 223 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Query: 16 PVMQAGLKEVMRTHFPEYEIISSAS-AEDL--TLLQLRRSGLVIADLAGESEDPRSVCEH 72 P++ G++ +M P EI++ A+ +L TL Q L+I D + ++D Sbjct: 12 PIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQ-HECDLLITDFSMPNDDNVDGMAM 70 Query: 73 YYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLL---SDVEPIENLVKTVRSGNTH- 128 L +Y + + + L+ LL S + + N VK V SG+ + Sbjct: 71 IKQLRRKYPNLPIIVLTQVHNLGVLQALMQIGINGLLLKKSVIAELANTVKKVLSGSVYI 130 Query: 129 AERISAMLTSPAMTETHDFSYRSVI-LTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + +L + + Y + I L+L E +V+RLL G + Q+AS L +S KTIS Sbjct: 131 GDAVRELLNEQGINQ-----YSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVKTIST 185 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 QK +AM++L + S++E++ + Sbjct: 186 QKTNAMQKLGLKSDSELFHY 205 >UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V170_PSEA7 Length = 213 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 6/185 (3%) Query: 30 FPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVF 87 F + +I+ A D LT L L+I DL + +Y ++ + Sbjct: 25 FDDLQIVGQAQDADGLLTQLDTHPCDLLITDLMMPDSQQADGLRLVQKVRRRYPQLQIIV 84 Query: 88 MVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH---AERISAMLTSPAMTET 144 + + + LL L+S + +L K +R G + I +L A Sbjct: 85 VTMLNNPALISSLLKLGIRGLVSKRGVLNDLPKAIRHGGRRPFLSHSIGHLLDVGAAEHG 144 Query: 145 HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 + LT E +VLRL G G I +IA L +S +TISAQK+SAMR+L + +NA + Sbjct: 145 KPLASLEE-LTPREVEVLRLYGSGLAIGEIALRLCRSKQTISAQKSSAMRKLGLDTNAGL 203 Query: 205 YAWIN 209 Y +I Sbjct: 204 YLYIQ 208 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 20/201 (9%) Query: 16 PVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYS 75 PV+ AG++E + E I A AED T L S L + + P + Sbjct: 12 PVILAGVREALGN---EPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGGKYGDGVA 68 Query: 76 LIS----QYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAER 131 L+ ++ I V + + A +++ +PI L +R+ Sbjct: 69 LLGFLRRRFAGIPLVVLTGVGGTQVLASIRKAGVACIVAKADPISELASAIRAARKGEGY 128 Query: 132 ISA-----MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +SA + + P E H LT E +VLRL+ +G +IA+ L++S +TIS Sbjct: 129 LSADVERQLASRPEGGEAH--------LTKREAEVLRLIAEGLSQTEIAAQLQRSRQTIS 180 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 QK+SAMR+L + AE++ + Sbjct: 181 TQKHSAMRKLGMQRPAEIFEY 201 >UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersinia aldovae ATCC 35236 RepID=C4U6X8_YERAL Length = 144 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 39/56 (69%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 +L+ +E KV+ L+ +G + ++A +L KS KT+SAQK S M ++ + +NA+ Y WI Sbjct: 80 VLSDAESKVISLISQGHSVTEVAKILNKSVKTVSAQKKSVMNKINVTNNADFYTWI 135 >UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0 Length = 217 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 11/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ P++ +GLK+ + +I+ + AE L+ +++ D + Sbjct: 7 VLVDDHPIVLSGLKDTLSQSM-NLDILGAYTQDAELFAFLKKNEVDVIVTDYMMPNNTQS 65 Query: 68 SVCEHYYSLIS-QYREIHWVF--MVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR- 123 S ++Y + QY I + MVS Q L + ++S P+ +L+K + Sbjct: 66 SDGQNYIQFLRRQYPNIAVIVLTMVSNPMIVQM--LYDSGVSAVVSKEAPLGDLMKAITL 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERK--VLRLLGKGWGINQIASLLKKS 181 +G R+ + + + + + TLS R+ VLRL +G I IA L +S Sbjct: 124 AGQGRQYRVPVADMTTTLKSRNAVTLNDRVKTLSPRELEVLRLFVQGKPIVDIAKQLNRS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 +KTIS QKN+AMR+L + +N + ++ Sbjct: 184 DKTISLQKNAAMRKLGVDNNQALISY 209 >UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=A9BU04_DELAS Length = 217 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 18/208 (8%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG---LVIADLAGESEDPR 67 V+ V+ G+K+ + P +++++ S +L+Q RS +V+ D + +D Sbjct: 9 VVDDHAVVLLGVKDFLEQD-PNLQVVATFSTPS-SLMQYARSNPLDVVLTDYSMPGDDVY 66 Query: 68 SVCEHYYS-LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 Y LI + +I + + + S L A +L +P+ ++ ++ Sbjct: 67 GDGLRYVDYLIRHFPDIKVLVLTTVSNPMIISALYDAGVAGVLLKEDPLTQIMAALQ--- 123 Query: 127 THAERISAMLTSPAMTETHDFSYRSVIL-----TLSERK--VLRLLGKGWGINQIASLLK 179 R++A SP+ RSV L +LS R+ VLR G I +IA+ L+ Sbjct: 124 --CVRLNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIAARLR 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +S KT+S QKNSAMR+L + SN ++ A+ Sbjct: 182 RSVKTVSLQKNSAMRKLNVDSNQDLAAF 209 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%) Query: 152 VILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 VIL+ E +V+RL G I +I+ L +S KTIS QKN+AMR+L + ++E++ + A Sbjct: 153 VILSKRELEVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGLERDSELFQY---A 209 Query: 212 QGARELNLPSVYGDAAEWNTA 232 Q +NL S AA+ T Sbjct: 210 QSNGLMNLSSYAPGAADTGTG 230 >UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE77A Length = 194 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 42/60 (70%) Query: 148 SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S R + LT E +V+RL G IN+IA+ L++S +TIS+QKN+AMR+++I N ++ + Sbjct: 120 SNRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLIKY 179 >UniRef50_B6VKY7 Pvp response regulator (Two-component response regulator bvg protein) n=2 Tax=Photorhabdus RepID=B6VKY7_PHOAA Length = 208 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 37/217 (17%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT----LLQLRRSGLVIADLAGESED 65 I+ PV GL+ V+ T Y+++ A D+T LL+ + ++I D ++ Sbjct: 6 IIADDHPVFLLGLRTVLATLPENYQVV--GEAHDVTALFSLLEEKEVDMLITDFNMPGDN 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL----VKT 121 +I + M+SR + L T++SD + I +L VK Sbjct: 64 ----------------QIDGLRMISR--IRERYPSLPIVVITMISDRKIIASLIDYKVKA 105 Query: 122 VRSGNTHAERISAMLTS------PAMTETHDFSYRSVI---LTLSERKVLRLLGKGWGIN 172 + + N+ + + L S P ++E S + LT E +V++LLG+G +N Sbjct: 106 ILNKNSLSHELVKGLYSTTGCHEPYLSEQFLESPGEEVVKALTSKELEVIKLLGQGLSVN 165 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 IA+ L ++ +TISAQK SAM++L +++ A +Y +++ Sbjct: 166 DIAARLYRTKQTISAQKISAMKKLGLNNEAALYNYLH 202 >UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3E5_DESAC Length = 263 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 20/223 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAG-ESEDP 66 +++++ PV++ GL ++R +P+ E++++AS L QLR++ +V+ DL E P Sbjct: 38 LIVAEFPVVEEGLDYLLRD-YPDIEVVATASNGVEGLEQLRKTPIDIVVHDLCSVELGGP 96 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 ++ + + + ++ + S+S E L + I+ LV +R + Sbjct: 97 EAITLY----LEEKPQLGVIEYSSQSDEVAVFESLKAGARGYVLKSSSIDELVNAIREVH 152 Query: 127 THAERISAMLTSPAMTETH--------DFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 ISA L +PA+ + + D +LT E++V RLL G ++I+ +L Sbjct: 153 QGGYFISAEL-NPAIIQFYLDHRENASDQLSEYQLLTDREKQVFRLLANGKQTHEISEIL 211 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 S KT++ + + ++L++++ AEM + A +NLPS Sbjct: 212 CISPKTVAKHRAAVKKKLSLNTTAEMAKY---AIQIGVINLPS 251 >UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK Length = 220 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%) Query: 107 TLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERK--VLRL 164 +++S +P+ +L+ + HA SP + + + + TLS+R+ ++RL Sbjct: 107 SIVSKSDPMSHLIAAI-----HAAHSGGRYLSPTIASLLERTESAAGATLSKRETEIVRL 161 Query: 165 LGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 +G+ + +IA L +S KTISAQK +AMR+L + S+AE+ Sbjct: 162 FREGYKVTEIAEKLHRSKKTISAQKLAAMRKLGVTSDAEL 201 >UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM Length = 210 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 12/177 (6%) Query: 33 YEIISSASAEDLTLLQLRRSGLVIA--DLAGESEDPRSVCEHYYSLISQYREIHWVFMVS 90 + I++S D + LRR+ + +A DLA D R E L + + + + + Sbjct: 37 FRIVASHGHSDAFIQDLRRTPVDVAIIDLALARGD-RDCMELVGLLRAAFPAVPLLAFAT 95 Query: 91 RSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYR 150 S L+ ++S EP+ L + + + +R+ +PA +E Sbjct: 96 LSPGIHIGPLIDAGVRGVVSKAEPLPLLSEAIVRVSLGLDRLPPDCRNPADSED------ 149 Query: 151 SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ +ER+VL LL G +++IA +S KT+S QK +A+R+L + ++AE+YA Sbjct: 150 ---LSRNEREVLHLLLAGLTVSEIAQQRHRSIKTVSTQKKAALRKLGLRNDAEIYAM 203 >UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XCS1_9ENTR Length = 160 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 10/123 (8%) Query: 88 MVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR---SGNTHAERISAMLTSPAMTET 144 M+ ++ Y V ++ A P+ L+K + G + + I + T+ Sbjct: 37 MIIQTLYDNNVNAVVSKEA-------PLPELIKAITLAGQGKQYRQPIVDLTTTMKSRNA 89 Query: 145 HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 R L+ E +VLRL +G I +IA LL +S+KTIS QKN+AMR+L + +N + Sbjct: 90 STLDERVKTLSPRELEVLRLFVQGKPIVEIAKLLNRSDKTISLQKNAAMRKLRVENNQAL 149 Query: 205 YAW 207 ++ Sbjct: 150 ISY 152 >UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR family n=34 Tax=Proteobacteria RepID=A9AQJ5_BURM1 Length = 224 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%) Query: 108 LLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVI---LTLSERKVLRL 164 +LS + I +LV G HA + A SP + D + SV LT E +V+RL Sbjct: 108 ILSKSDAISHLV-----GAVHAAFVCADYQSPHIRHLLDSAGSSVTERRLTTREIEVVRL 162 Query: 165 LGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 G + +IAS L +S +TIS+QK SAM++L I +A++ + + Sbjct: 163 YAAGLTVGEIASQLHRSKQTISSQKASAMKKLGIVRDADLIRFAD 207 >UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas RepID=Q4KHP5_PSEF5 Length = 220 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 38/56 (67%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 L+ E +V+RLL G + +IA+ L +S +T+SAQK SAMR+L + S A +Y ++ Sbjct: 160 LSPRELEVIRLLAAGHAVGEIAAQLNRSKQTVSAQKVSAMRKLGLSSEAALYIYVQ 215 >UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5 Tax=Burkholderiaceae RepID=B4ELF5_BURCJ Length = 238 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 35/53 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 L+ E +VLR G ++ IAS +S KTISAQK SA R+L I S+AE++A Sbjct: 175 LSPREHEVLRCFLAGMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAELFA 227 >UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=C5ALF7_BURGB Length = 215 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%) Query: 113 EPIENLVKTVRS----GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKG 168 E NL+ + + G A+ I++ L + T+D L+ E V+RL+ G Sbjct: 112 EDFANLITAIHAVKSRGFYLADSIASRLLATTGHATNDICLSLNKLSAKEAAVVRLICNG 171 Query: 169 WGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 IN IA LK+S KTIS QKN+ M++L + ++ E+ Sbjct: 172 LSINDIAKRLKRSPKTISNQKNAGMKKLGVKNDIEL 207 >UniRef50_B4STE5 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STE5_STRM5 Length = 208 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 31/216 (14%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ PV+ G++ V++TH +++ SA AE L L+ V+ DL+ P Sbjct: 6 IIADDHPVVLHGIRVVLQTHL--MDVVGSACDGAELLQLVDNNDCDAVLTDLSMPGAGPD 63 Query: 68 SVCEHYYSLISQYREIHW---VFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 LI R H V +++ + + ++ L+ E I LV Sbjct: 64 G-----PELIDALRARHPGLPVVVLTGARHPGLLDGLL---------REGISGLVDKCAD 109 Query: 125 GNTHAERISAMLTSPAMTET---HDFSYRSVI-------LTLSERKVLRLLGKGWGINQI 174 + +SA L H R ++ L+ E++VL LL G +N + Sbjct: 110 FTELPQALSAALAGQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLLAAGLSVNAV 169 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 A +S KTIS QK A R+L + +N E++ ++ + Sbjct: 170 AERCGRSPKTISRQKAEAKRKLGLQNNQELFDYLQT 205 >UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C3_PSEFS Length = 211 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 41/58 (70%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 L+ ER+V+R+L G ++QIA+ + +S TIS QK++AM RL I ++ +++A+ S+ Sbjct: 150 LSGKEREVVRMLASGMTVSQIAARVNRSISTISKQKSTAMSRLCISTDVDLFAYARSS 207 >UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA Length = 265 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 36/53 (67%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 +L+ E +VLRL +G+ + QIA L +SNKTIS QK SA R+L I + E++ Sbjct: 194 LLSPRELEVLRLTLQGFEVGQIAEKLSRSNKTISTQKRSAYRKLGISGDRELF 246 >UniRef50_Q1LG72 Two component transcriptional regulator, LuxR family n=3 Tax=Cupriavidus RepID=Q1LG72_RALME Length = 217 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 5/91 (5%) Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 TV +G+ ++ I A+L S T + + LTL E V+RL +G+ + +IA+ L + Sbjct: 127 TVSNGHFYSPSIRAVLDSATAAAT---AAPATDLTLRELDVVRLYAQGFQLTEIANKLGR 183 Query: 181 SNKTISAQKNSAMRRLAIHSNAEM--YAWIN 209 S TIS+QK AMR+L++ +N ++ YA+ N Sbjct: 184 SVSTISSQKTVAMRKLSVQTNTDLIRYAYEN 214 >UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1 Tax=Bordetella avium 197N RepID=Q2L102_BORA1 Length = 231 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 17/200 (8%) Query: 16 PVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLA---GESEDPRSVC 70 P + AG++ ++FP E++ A S E ++LL+ +V+ D A G D ++ Sbjct: 12 PALLAGIQHQF-SNFPTLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGRFSDGMALI 70 Query: 71 EHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS---GNT 127 + + Y I + + + + EL +L+ V +LV + + G+T Sbjct: 71 LYLRRI---YPNIKLIVFTAMDNGAISQELAKLGVHAVLNKVNDTNHLVSAIHAAYAGST 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + A P E +F L+ E +V+RL G + +IA L ++ +TIS+ Sbjct: 128 YYRPNQARTPRPE-AEQSEFK----PLSRRELEVIRLYISGLSVQEIADQLHRTKQTISS 182 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 QK+SAMR+L I +A+++ + Sbjct: 183 QKSSAMRKLDITRDADLFRF 202 >UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM Length = 223 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Query: 110 SDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKG 168 S V+ I V TV SG + + A A E RS+ +L+ E +VLRL G Sbjct: 110 SGVDGIRRAVDTVLSGGIYLDPELAHCLQDAGRE------RSLSVLSPKELEVLRLYVSG 163 Query: 169 WGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 I +IA+ L+++ TIS Q+ SAMR+L I ++AE++A+ Sbjct: 164 PSITEIAAQLRRTVSTISRQRISAMRKLGISNDAELFAY 202 >UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex RepID=A2WHU0_9BURK Length = 204 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%) Query: 107 TLLSDVEPIENLVK---TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLR 163 ++L+ V+ I +L+ TV +G + + L A +E + LT E +VLR Sbjct: 75 SVLNKVDDIGHLITAIHTVFAGAAYYSPGAQNLAHAAASEYMPDTMSGTSLTKREAEVLR 134 Query: 164 LLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 L G IN+IA+ ++++ +TISAQK AM++L + + +++ Sbjct: 135 LYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLF 176 >UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JCS9_BURP8 Length = 236 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 17/208 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ P++ ++ +M + FP EI+ A S+E Q + LV+ DL P Sbjct: 14 IIADDHPLVLLAMENLM-SGFPNIEIVGKATDSSELFAEAQRVKCELVVMDLYM----PG 68 Query: 68 SVCEHYYSLISQYREIHWVFMV-------SRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + ++ Q++E H +V S + + L + + ++ I + Sbjct: 69 GLHGDGVEMVRQFKERHPDVVVVVLTMETSADALQKVIALGVGAVVSKRDRIDLIHVAII 128 Query: 121 TVRSGNTH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 T + + I A+L ++ D+ + +L+ E +VL G G+ +IA L Sbjct: 129 TALARECYVGPAIRALLADATLSRRIDYVRQ--VLSRRELEVLTHYATGRGVTEIAMRLG 186 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +S KTISAQK +AMR+L++ S+A+++ + Sbjct: 187 RSVKTISAQKCTAMRKLSLQSDADLFRF 214 >UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LLE4_RALME Length = 213 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 34/52 (65%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 LT ER+VLR G +N+IA+ +S KT+S K SA+R+L I S+ E++ Sbjct: 156 LTEKEREVLRCFLDGMTVNEIAAKFSRSKKTVSGHKQSALRKLGIRSDNELF 207 >UniRef50_C4SZW9 DNA-binding HTH domain-containing protein n=2 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZW9_YERIN Length = 192 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 37/56 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 LT E V+ LL +G+ I+ +L +S KTIS QK SAM++L + SNAE++ I+ Sbjct: 137 LTPCESAVIDLLKQGFTGKDISKILGRSEKTISGQKRSAMKKLGVCSNAELFRQIH 192 >UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GKY2_SERP5 Length = 203 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 38/64 (59%) Query: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 R L+ E+KVL+L+ G IA +L +S KTISA K SAMR+L +H + E+ + Sbjct: 138 RIAALSSCEKKVLKLMSTGMSACTIAGMLHRSQKTISAHKRSAMRKLNVHKSTELNKMLL 197 Query: 210 SAQG 213 + G Sbjct: 198 NQMG 201 >UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH0_PSEF5 Length = 251 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 34/52 (65%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 L+ E +VLR G I+QIAS +S KTIS QK +A R+L I ++AE++ Sbjct: 164 LSPKENEVLRCFLDGLRISQIASKFSRSIKTISGQKQAAFRKLGIRTDAELF 215 >UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, partial and n=17 Tax=Salmonella enterica subsp. enterica RepID=Q9EUH1_SALEN Length = 119 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 36/51 (70%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 L+ +E +V+RLL +G+ QIA+L +S KTISAQK A RRL + ++A + Sbjct: 32 LSPAELRVIRLLLRGYNSGQIAALCFRSVKTISAQKGQAFRRLGVRNDATL 82 >UniRef50_Q145Q9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=Q145Q9_BURXL Length = 225 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 6/70 (8%) Query: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 R+ +L+ E ++ +L +G ++QIA+ L++S KTIS QK SAMR+L + + A++ + Sbjct: 161 RAGMLSAREWEIFQLYVQGLAVHQIAARLQRSGKTISTQKRSAMRKLGLETEADLIDY-- 218 Query: 210 SAQGARELNL 219 AR++ L Sbjct: 219 ----ARQIGL 224 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Query: 119 VKTVRSGNTH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASL 177 V+T G + + R+ LT +TE S R+ LT E +VLRLL G ++ + Sbjct: 118 VRTALRGAIYISARLQRELTKLGLTEME--SQRAANLTPRELEVLRLLASGKSPTEVGQM 175 Query: 178 LKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L ++ KT+S K SA R+L + S+AE+Y ++ Sbjct: 176 LHRTIKTVSWAKTSAKRKLGLKSDAELYEYV 206 >UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME Length = 215 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 L+ ER+VLRLL +G + +IA+ +S KTIS QK +AM +L + + E+ ++ SA Sbjct: 153 LSPREREVLRLLAQGLSLREIAARFNRSRKTISVQKCAAMAKLGLTHDMELGRYLASAD 211 >UniRef50_A4TP15 LuxR-family regulatory protein n=31 Tax=Yersinia RepID=A4TP15_YERPP Length = 205 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 LT +E VL+L +G+ IA +LKKS KT+S QK SAM++L ++ E+ Sbjct: 148 LTPNENIVLKLFNEGFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVEL 198 >UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC Length = 246 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 38/59 (64%) Query: 146 DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 D+ R+ +L+ E V+RLL +G + +IA L +S KTIS QK +AM++ + +N ++ Sbjct: 177 DWQARTNLLSPRELDVVRLLSRGMAVGEIAVKLSRSRKTISTQKANAMKKFGVKTNVDL 235 >UniRef50_C4U6W8 LuxR-family regulatory protein n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U6W8_YERAL Length = 229 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 LT +E VL+L +G+ IA +LKKS KT+S QK SAM++L ++ E+ Sbjct: 172 LTPNENIVLKLFNEGFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVEL 222 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 34/54 (62%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ E +V+RL G +N IA L +S KTIS QK+SAM++L I + ++ + Sbjct: 154 LSARELEVIRLFASGLSVNDIAEQLSRSKKTISTQKSSAMQKLGIERDVDLVRY 207 >UniRef50_UPI00016A3B5C two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5C Length = 213 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 108 LLSDVEPIENLVKT---VRSGNTHAERISAMLTSPAMTETHDFSYRSVI----LTLSERK 160 L+ +P +++ V +G TH SPAM + + + I LT E Sbjct: 107 LVGKNDPAHEIIRACMQVHAGATHH-------VSPAMRKRMEDGRSTHICDSNLTQKELD 159 Query: 161 VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 V+RL G +++IA ++S TIS+QK++AMR+L +HS A++ + Sbjct: 160 VVRLTANGLSLSEIALQYRRSVSTISSQKSTAMRKLGVHSTADLIRY 206 >UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM Length = 199 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Query: 138 SPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRR 195 SP++ E D R+ L+ E++V+ L G + +IA L + +T+S QKN+AMR+ Sbjct: 118 SPSVAEILDRREQRRATALSPREQEVVELFIAGLSVAEIARKLDRKKQTVSTQKNNAMRK 177 Query: 196 LAIHSNAEMYAW 207 L I +AE+ + Sbjct: 178 LGIERDAELLTF 189 >UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter RepID=C9XUX9_CROTZ Length = 200 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 47 LQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAV-ELLMCPT 105 L R VI L G E R + + + + + MV+ ++ + +L P Sbjct: 33 LTYRHFSTVIFSLEGTREHRRDCLQFVSEMAKAWPRMKRIVMVNNVNEAKLISQLSPTPL 92 Query: 106 ATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSV---ILTLSERKVL 162 ++ E + + S + + R+S SP H Y S +L+ +ER +L Sbjct: 93 QGIIDKSETLSRFTDELMSAMSDSARVSE---SP-----HKIWYASQGSRLLSPTERIIL 144 Query: 163 RLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 R L G+ ++QIA L+++ KTI A K +AM +L +H++A + Sbjct: 145 RYLTDGYSVSQIACRLERNIKTIRAHKFNAMLKLGVHTDAGL 186 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 36/59 (61%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 L+ E +VLRLLG G + +I+ L KS TIS QK AM +L + +AE++ ++ + Sbjct: 153 LSPREVEVLRLLGTGMTVKEISLQLHKSVSTISRQKGDAMLKLGLKGDAELFDYLRDGK 211 >UniRef50_A8G883 Transcriptional regulator, LuxR family n=1 Tax=Serratia proteamaculans 568 RepID=A8G883_SERP5 Length = 250 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 LTL+E +VL L G Q+AS L + +T+S+ K AM ++ + N E+YA + + Sbjct: 112 LTLTESQVLLTLLDGTHTQQLASRLNRDIRTVSSHKKRAMDKVGLRHNGELYA-LGALLY 170 Query: 214 ARELNLPSVYGDAAE 228 RE +P+V+ AE Sbjct: 171 DREYTMPAVFLPPAE 185 >UniRef50_D2TRD6 LuxR-family transcriptional regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TRD6_CITRO Length = 221 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 19/194 (9%) Query: 21 GLKEVMRTHF-PEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQ 79 GL +M+T P+ II S D ++ +RR+ ++I S P C + + Sbjct: 21 GLVTMMKTILGPDKNIIVSG---DYSISGVRRADIIIM-----SSTPALPCLCLPNF--R 70 Query: 80 YREIHWVFMVSRSWYS--QAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT 137 +R+ H + +V +S ++ C + LL + + L++T A + + Sbjct: 71 FRQPHSLVIVFNDRHSNFRSHTCAACNSGVLLLNHKKPIGLIRTRLEQTIKAVSMEDISC 130 Query: 138 SPAMTETHDF-SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRL 196 +P D+ S R L+ + +V++ + +G+ + +IA L+ S KTI A K M+R+ Sbjct: 131 TPG-----DYLSCRHCRLSKKQLQVIQYMRQGYNVQRIAKLMNVSAKTIHAHKYRIMQRI 185 Query: 197 AIHSNAEMYAWINS 210 N +Y +INS Sbjct: 186 GTKGNVRLYNFINS 199 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%) Query: 76 LISQYR-EIHWVFMV---SRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAER 131 LI + R E+ +F+ + ++ V+ M +L D P + L+ +R Sbjct: 70 LIRKERPEVKVIFLSMYDDEDYLAECVD--MGANGYILKD-SPADQLITAIREVQRGGSY 126 Query: 132 ISAMLTSPAMTETHDF----------SYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +S L S + DF S R LT ER++L++L +G + +IA+ + S Sbjct: 127 LSPRLLSRLV---DDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ A K + MR+L IH+ A++ + Sbjct: 184 VKTVEAHKFNLMRKLDIHNKAQLVQY 209 >UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria RepID=A6V5P3_PSEA7 Length = 221 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 134 AMLTSPA--MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNS 191 A + PA +T + R L++ E +VLR G + IA LLK+S KT+S QK S Sbjct: 138 AHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNNVCDIARLLKRSVKTVSTQKIS 197 Query: 192 AMRRLAIHSNAEMYAW 207 AMR+L ++S+ + + Sbjct: 198 AMRKLEVNSDQALMTF 213 >UniRef50_B4SIR4 Two component transcriptional regulator, LuxR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIR4_STRM5 Length = 208 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 12/177 (6%) Query: 33 YEIISSAS-AEDL-TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVS 90 + I++S S +EDL T L + I DL+ +D R E L + I + + Sbjct: 35 FTIVASHSLSEDLITTLHRLPVDVAIIDLSLAPDD-RGSAELIPLLRETFPHIPLLAFAT 93 Query: 91 RSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYR 150 S + L+ ++ EP+ L + + + R+ PA D S Sbjct: 94 LSPATNLSHLINAGIGGVVGKAEPLPMLSEAIVCVHQGLGRLPPDFILPA-----DCSE- 147 Query: 151 SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ +ER+VL LL G +++IA +S KT+S QK +A+R+L + ++AE+YA Sbjct: 148 ---LSRNEREVLELLLTGLTVSEIALRRHRSVKTVSTQKIAALRKLGLRNDAEIYAM 201 >UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria RepID=Q4KAJ3_PSEF5 Length = 217 Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 37/54 (68%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LT E +VLR +G + QIA+ LK+S KT+SAQK SA+R+L + S+ + A+ Sbjct: 156 LTPKEYEVLRHFVRGESMMQIAANLKRSVKTVSAQKISAIRKLNLDSDQALVAF 209 >UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia RepID=D0FMI8_ERWPY Length = 214 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM--YAWINSA 211 LT E +V+RL G+ +++IA ++ T+S QK +AMRRL + SN E+ YA+ A Sbjct: 154 LTPKELEVIRLFSSGYTLSEIARRQNRTISTVSTQKYNAMRRLGVSSNVELIRYAY---A 210 Query: 212 QG 213 QG Sbjct: 211 QG 212 >UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B1Z6J3_BURA4 Length = 225 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 60/128 (46%) Query: 80 YREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSP 139 Y ++ V +V+ +L +L+S ++ + ++V + + +S + Sbjct: 80 YPQVGMVVLVTHENPVIIQAILDLGVESLVSKLDDVGHIVTAIHACYGGGSYLSPQIKRS 139 Query: 140 AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIH 199 + D + L+ E +V+RL G INQIA L + TIS+QK SAM++L + Sbjct: 140 LASSGGDGRRPPLRLSPREIEVIRLYLSGMTINQIAGRLNRGKPTISSQKISAMKKLGVK 199 Query: 200 SNAEMYAW 207 + E+ + Sbjct: 200 GDVELVRY 207 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 36/58 (62%) Query: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 R +LT E +++ +L +G G+N IA +L SNKT+S K+ M ++ +NA++ + Sbjct: 148 RHELLTSREHQIMVMLAQGLGVNAIAEMLAISNKTVSTHKSRLMEKMQFTTNADIVKY 205 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 38/57 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 L+ E +VLRL +G+ + +IA L +S KTIS+QK SAM +L + ++ + +++S Sbjct: 151 LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 >UniRef50_D2TK25 Putative response regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TK25_CITRO Length = 218 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 143 ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202 ET D R LT E +VL L+ +G I+ IA KSN T++ QK +AM++L + SN+ Sbjct: 149 ETDD---RQCPLTPKEWEVLYLVAQGCSISDIAGRKNKSNSTVATQKQNAMKKLNLSSNS 205 Query: 203 EMYAWI 208 E+ ++ Sbjct: 206 ELIKYM 211 >UniRef50_B8DKC1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKC1_DESVM Length = 231 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 36/55 (65%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +LT ER+VL L+ +G+ +IA LL S++T+ + + R+L++HS A+ AW Sbjct: 157 LLTPREREVLHLVAEGYRNREIAGLLVVSDRTVEKHRANLFRKLSLHSQADARAW 211 >UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK Length = 210 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 35/54 (64%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 ILT ER+V+ L+ G I+ I+ L + KTIS K +A R+L + S+AE+++ Sbjct: 151 ILTPREREVVNLILIGMSISDISKKLVRDRKTISGHKQTAYRKLGVSSDAELFS 204 >UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia RepID=C4KLT2_BURPS Length = 221 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 27/198 (13%) Query: 30 FPEYEIISSASAEDLTLLQLRRS--GLVIADL----AGESEDPRSVCEHYYSLISQYREI 83 P + +++S S+ D L +R LV+ D A + +D + H + I Sbjct: 31 LPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMHQANDDKDGLRLISHLMRAYERTPII 90 Query: 84 HWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTE 143 + + + SQ L A L+ E I L + S A +S L SP M Sbjct: 91 VFTMLTNSGVISQ---LCRMGVAGLVGKEEEIAELGRVCVS---VARGVSQSL-SPGMA- 142 Query: 144 THDFSYRSVI---------LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMR 194 H + I LT E +V+RL G + IA L +S T+S QK SAMR Sbjct: 143 -HRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMR 201 Query: 195 RLAIHSNAEMYAWINSAQ 212 +L + +N ++ IN A+ Sbjct: 202 KLHVDTNVDL---INCAR 216 >UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC Length = 223 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Query: 153 ILTLSERK--VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 I +LSER+ + R+LG+G + +IA +S KTIS QK AM +L S A++Y Sbjct: 161 IESLSERELEIFRMLGRGMSVTEIAMHTNRSIKTISHQKMRAMHKLGARSEADLY 215 >UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=cellular organisms RepID=BGLJ_ECOLI Length = 175 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 36/53 (67%) Query: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202 +S L+ +ER++LR + +G+ + QIA LK++ KTI A K + M +L + S+A Sbjct: 99 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 151 >UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21 Tax=pseudomallei group RepID=C4I5I0_BURPS Length = 242 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 9/107 (8%) Query: 107 TLLSDVEPIENLVKTVRSGNTHAERISAMLTS------PAMTETHDFSYRSVILTLSERK 160 +++ ++ I+NL+ TV++ A + A + + P E + + L+ E + Sbjct: 116 AIVNKMDHIDNLIATVQAVYAGASCLPAGIGAFASSRLPVDGEAPEIERQ---LSARELE 172 Query: 161 VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 ++RL G +N+IA+ L +S + +S QK +AMR+L I +A ++ + Sbjct: 173 IVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRY 219 >UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY57_COMTE Length = 201 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW-INSA 211 LT E +VLR +G + +IA L +S KT+S+QK +AMR+L SN E+ A+ +NS Sbjct: 139 LTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMRKLEAKSNQELMAFCLNSG 197 >UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GFU0_SERP5 Length = 199 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%) Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + N + A+L P D + R +L E++VL L G ++ IA +S K Sbjct: 87 TSNAMLHALGALLNPPLSV---DITARRQLLAPREQQVLNALLNGHSVSDIAHQQARSVK 143 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGAREL 217 T+S QK M++L +HS E++A + Q AR L Sbjct: 144 TVSFQKRHLMQKLGLHSEVELFAL--APQQARAL 175 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%) Query: 105 TATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETH--DFSYRSVILTLSERKVL 162 T L D +P + L+ +R I L + ETH D V L+ E +VL Sbjct: 99 TGYLTKDSDP-DVLLAAIRKLADGGRFIDPKLVDAMVFETHRGDMPPHEV-LSDREFQVL 156 Query: 163 RLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 ++L G IN+IA + S KTIS K M++L + +NAE+ + Sbjct: 157 QMLAAGKSINEIADICALSAKTISTHKMRLMQKLGLANNAEVIRY 201 >UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella RepID=A9IRH9_BORPD Length = 258 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 35/56 (62%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 LT +E +VLR + +G + Q+A+ L +S KTIS K AM++L + + + ++N Sbjct: 194 LTTAEIEVLRQIAQGLSVTQLAARLLRSKKTISTHKRRAMKKLGLADDLALALYLN 249 >UniRef50_B2VL70 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VL70_ERWT9 Length = 200 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 LT SE +V+ + + + LK S KTISA K S MR+L N E+Y W+ S G Sbjct: 133 LTRSEVRVISCMAQEMSPVSLPQYLKISPKTISAHKRSVMRKLGFKRNEELYHWLRSG-G 191 Query: 214 ARELNLP 220 ++ P Sbjct: 192 LEQIERP 198 >UniRef50_UPI0001C33E7F two component LuxR family transcriptional regulator n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C33E7F Length = 192 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 41/59 (69%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 +L+ E +V+ L+ +G+ I +IAS +S TI+ QK++AM++L I S++E+ ++N+ Sbjct: 129 VLSAREWEVIHLIVEGYTITEIASYRNRSVSTIATQKHNAMKKLNISSHSELIKYLNTV 187 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Query: 156 LSERK--VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LS R+ +LRLL G +N +AS L SNKT+S K M ++ SNAEM + Sbjct: 149 LSNRELCILRLLVAGKTVNDVASQLVISNKTVSTHKARMMEKMGFQSNAEMIRY 202 >UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LGB9_RALME Length = 300 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 34/51 (66%) Query: 158 ERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 E +VLRL G + +IA+ L +S KTIS QKN AM++L + ++ E++ + Sbjct: 240 EMEVLRLYLTGRTVTEIATTLCRSVKTISRQKNCAMQKLGVTNDRELFECV 290 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%) Query: 119 VKTVRSGNTH-----AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 ++TV SG + AE + L SP Y +LT ER+VL+LL +G + Q Sbjct: 116 IRTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPY--AVLTAREREVLKLLVRGHTLTQ 173 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 IA LL S KTI K M +L + +++ + Sbjct: 174 IAGLLHLSVKTIDTHKTHVMEKLNLTHKSQLVDY 207 >UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Enterobacter RepID=A4W681_ENT38 Length = 211 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%) Query: 133 SAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSA 192 + + S A T H R +L+ +ER VLR + G I +IA L+++ KTI A K +A Sbjct: 116 TGQVNSNAFTHWHGCHTR--MLSPTERTVLRYMSSGLSIPEIAEQLERNIKTIRAHKYNA 173 Query: 193 MRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEW 229 M +L ++S+ + +++A R NLP V A W Sbjct: 174 MLKLGVNSDVGL---LDAADILR--NLPMVKPRFALW 205 >UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms RepID=Q0K0R3_RALEH Length = 216 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 34/54 (62%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ E +V+R+ G + +IA L +S TI+ QK SAMR+L I +NA++ + Sbjct: 156 LSPREIEVVRMFATGSTLTEIAGYLHRSLATIATQKRSAMRKLNITTNADLVTY 209 >UniRef50_Q21TB2 Transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB2_RHOFD Length = 202 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 148 SYRSVILTLS--ERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 S R V +TL+ ER+++R L G G QIA L S +TI + MR++ S++EM Sbjct: 136 SRRPVAMTLTAREREIVRQLAAGQGTKQIARTLGVSPRTIDGHRARIMRKVGAQSSSEMI 195 Query: 206 A 206 A Sbjct: 196 A 196 >UniRef50_B2U714 Two component transcriptional regulator, LuxR family n=5 Tax=Ralstonia RepID=B2U714_RALPJ Length = 215 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ ER+VLRL G ++ IA +L S KT+S QK A+R+L + +++ + Sbjct: 152 LSAREREVLRLYAAGTAVSDIAQMLGSSVKTVSTQKAVALRKLGLVREIDLFQY 205 >UniRef50_A7FGF4 Transcriptional regulator, LuxR family n=26 Tax=Yersinia RepID=A7FGF4_YERP3 Length = 200 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 34/54 (62%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+++E KV++L GKG I+ +L +S KTI + +A+R+L + + E Y + Sbjct: 130 LSMTESKVVQLTGKGHSTTDISKILDRSEKTILTHRRNAIRKLGMFNRLEFYKY 183 >UniRef50_A6C9W9 Two component transcriptional regulator, LuxR family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9W9_9PLAN Length = 221 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 11/185 (5%) Query: 31 PEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFM 88 P+ E++ +A+ D L L+ +VI D+ + E S + + I Sbjct: 31 PDIEVVGTATNADEGLALILETEPDVVILDVELPGRGSFDIAEEISSRLKNTKMIFLTGY 90 Query: 89 VSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN----THAERISAMLTSPAMTET 144 +S + A L L EPIE+L+ ++ + ++ + L E Sbjct: 91 LSDIFIELA---LRVNAKGYLLKGEPIESLIHAIKKASRGEYCFSQSVQERLVFDHKKER 147 Query: 145 HDFSYRSVILTLSERK--VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202 + +S++ +L+ R+ VLR L +G + ++A + S K+I + K M +L IH Sbjct: 148 YSIQSKSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLSEKSIDSHKYRIMHKLGIHDRV 207 Query: 203 EMYAW 207 E+ + Sbjct: 208 ELARY 212 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS-AEDLTLLQLRRSGLVIADLAGESE 64 C+ +V+ P+++ G++ V+ + ++ +A AE R LV+ D+ E Sbjct: 7 CERVLVVDSHPIVRDGIEVVLGKAYAGIDVDGAADMAEASDRCGRDRPDLVLLDVMLPGE 66 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEP--IENLVKTV 122 DP R + + + S + + A+ + LL P I ++ V Sbjct: 67 DPLPAMGEILRAHPGLRFVVFTALGSEARAADAIRF--GASGYLLKWCSPDGIVQAIRRV 124 Query: 123 RSGNTHAE------RISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 +G H + R+++ + D LT E++VL+L+ G +IAS Sbjct: 125 MAGRVHIDPSLDEARVASAAGGRTLASPVDE------LTRREKQVLKLIADGMRNREIAS 178 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LL S KT+ + M++L + A + W Sbjct: 179 LLNISPKTVDCHRQRLMQKLGARNVATVIHW 209 >UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14 Length = 212 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 118 LVKTVRSGNTHAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 L++ ++ H IS A +F SV L+ E +V+RLL G Q+A Sbjct: 114 LIEAIKKVARHQRYISPFFREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAE 173 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L +S KTIS K SA +L I ++AE+Y + Sbjct: 174 KLSRSIKTISWTKVSAKTKLGIKTDAELYQY 204 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 145 HDFSYRSVILTLSERK--VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202 H S R LS R+ V+R+ G +++A L +S TIS QK +AMR+L + ++A Sbjct: 142 HQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSINTISTQKTNAMRKLGVSNDA 201 Query: 203 EMYAW 207 E++ + Sbjct: 202 ELFDY 206 >UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=Burkholderia RepID=A9APD3_BURM1 Length = 234 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 33/54 (61%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ E +V+RL G I IA L K +T+SAQK SAM++L H++ E+ + Sbjct: 152 LSSREVEVIRLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRY 205 >UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Enterobacter sp. 638 RepID=A4WED0_ENT38 Length = 204 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 138 SPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRR 195 SP + H + + V+ T +E VL L KG ++I+ LL +S KTIS+ K + M + Sbjct: 125 SPLIIRQHHAASLAKPVVFTPAESTVLEYLRKGCSGSEISKLLFRSEKTISSHKRNIMGK 184 Query: 196 LAIHSNAEMYAWINSA 211 L + + E+ + IN++ Sbjct: 185 LGVRDDFELNSKINTS 200 >UniRef50_B5MPU1 Transcriptional regulator, LuxR family n=30 Tax=Salmonella enterica RepID=B5MPU1_SALET Length = 90 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 34/51 (66%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 LTLSE+KV+ + G + ++LL ++ KTIS QK SA +++ I ++ E+ Sbjct: 25 LTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVEL 75 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 11/137 (8%) Query: 100 LLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVI----LT 155 LL + ++S + +++L+ V + T S T + S R V L+ Sbjct: 100 LLGLGISCIVSKSDAVDHLIPAVHAAATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLS 159 Query: 156 LSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM--YAWINSAQG 213 E +V+RL G +N+IA L +S KTIS QK AM++L + + ++ YA + Sbjct: 160 SREIEVVRLYASGMTVNEIAEKLSRSKKTISTQKARAMQKLGVEKDIDLLRYAMEHGIVA 219 Query: 214 ARELNLPSVYGDAAEWN 230 A P G AAE + Sbjct: 220 A-----PGGEGKAAEQD 231 >UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem domain,LuxR C-term domain n=1 Tax=Cupriavidus taiwanensis RepID=B3RBJ1_CUPTR Length = 223 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Query: 155 TLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM--YAW 207 T E +V+RL +G + +IA+ L +S T+S+QK AMR+L + +N + YA+ Sbjct: 164 TQRELEVIRLFAQGAQLTEIAAKLGRSVSTVSSQKTVAMRKLGVQTNTALIRYAY 218 >UniRef50_Q7NVE2 Capsula synthesis response regulator transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVE2_CHRVO Length = 231 Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%) Query: 139 PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAI 198 P + + D S R ER+VLR G +++IA +S KTIS QK SA+++L + Sbjct: 163 PNLLDHPDLSPR-------EREVLRCCLLGLSVSEIAVKFSRSIKTISNQKQSALKKLGL 215 Query: 199 HSNAEMY 205 S+ E++ Sbjct: 216 RSDNELF 222 >UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LDE9_RALME Length = 214 Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 35/54 (64%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ E +V+R G + +IA +S+KTISAQK+ AMR+L + S+ E+Y + Sbjct: 150 LSKRELEVVRKCAAGVPLVEIARQANRSSKTISAQKSMAMRKLGLTSDYELYQY 203 >UniRef50_B2JLH9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JLH9_BURP8 Length = 219 Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 34/54 (62%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LT E +V+RL G + IA L +S TI+ QK++AM++L + +NA++ + Sbjct: 159 LTKKELEVIRLFASGASLTDIARHLNRSLSTIATQKSAAMKKLYLQTNADLVKY 212 >UniRef50_B5WJ97 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. H160 RepID=B5WJ97_9BURK Length = 195 Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%) Query: 106 ATLLSDVEPIENLVKTVRSGNTHAERISAMLTS-PAMTETHDFSYRSVI-LTLSERKVLR 163 LL + P E ++ VRS + I+A + + + +F R V L+ E +VLR Sbjct: 87 GVLLKNDSP-EEVISAVRSVSRGQFYIAASVRRITGINDCEEFEARKVGHLSAREGEVLR 145 Query: 164 LLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L G I++IA+L +S +T+S Q+ M++L ++ E++ ++ Sbjct: 146 LYVSGMSISEIAALSHRSLQTVSTQRKQGMKKLGFTNDRELFEYM 190 >UniRef50_A9VZM9 PAS sensor protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9VZM9_METEP Length = 278 Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 145 HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 HD S ILT+ ER++L L+ G + IA L S T+ + R+L +H AE Sbjct: 203 HDGDGASPILTVRERQILNLICTGLDDDAIAKRLNLSRNTVRNHGAALYRKLGVHKRAEA 262 Query: 205 YAWINSAQGARELNLP 220 W RE P Sbjct: 263 VIW------GRENGFP 272 >UniRef50_C4SF83 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4SF83_YERMO Length = 205 Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 36/56 (64%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 ILT +++++ + +G ++IA L+ KT+S+ K SAM+RL ++ ++Y WI Sbjct: 135 ILTRRQKQIINYVSEGICPSKIADNLQIHEKTVSSHKRSAMKRLQLNKTTDLYYWI 190 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 12/117 (10%) Query: 110 SDVEPIENLVKTVRSGNTH-AERISAMLTSP----AMTETHDFSYRSVILTLSERKVLRL 164 D E ++ + V+SG T+ A+ I + P M T + + LTL ER+VL L Sbjct: 109 GDPEELDTAIDAVKSGKTYLAKSIRFAVADPERLGKMPVTGEI-VSPIPLTLRERQVLLL 167 Query: 165 LGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 +G Q+A L S T + + MR+L +HS AE+ A+ A L LP+ Sbjct: 168 SAQGQTSRQMAERLGISPLTARKHRENLMRKLNLHSTAEVTAY------AVRLGLPA 218 >UniRef50_C4SVX3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Yersinia RepID=C4SVX3_YERFR Length = 218 Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 33/55 (60%) Query: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEM 204 R IL+ ER VL LL +G N IA L+ SNKT+S K SA+ +L I++ M Sbjct: 141 RPCILSKRERTVLALLLQGKSNNDIADHLQLSNKTVSYHKRSALGKLGINTLQPM 195 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 35/55 (63%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +LT E++VLRL+ +G QIA+ ++ S KT+ + + M++L +HS E+ + Sbjct: 156 LLTPREQQVLRLVAEGSSTRQIAAAIELSPKTVENHRTNLMKKLDVHSKMELVKY 210 >UniRef50_A8ADM1 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8ADM1_CITK8 Length = 193 Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY----AWI 208 +LT+SE +V++ + +G +IA K S KTIS QK +A+R+L+I+ + + AW+ Sbjct: 95 VLTVSELRVIKKVCQGISQRRIAEQFKVSEKTISNQKMNALRKLSINKTTKFFVEYLAWL 154 >UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6 Tax=Ralstonia RepID=B2UFA9_RALPJ Length = 222 Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 34/50 (68%) Query: 158 ERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 E +VLR+ G +++IA L +S KTIS+QK +AMR+L + + A ++ + Sbjct: 161 ELEVLRMYVTGKTVSEIAQQLNRSVKTISSQKQTAMRKLELGNEAALFDF 210 >UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL Length = 215 Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%) Query: 16 PVMQAGLKEVMRTHFPEYEII-SSASAEDL-TLLQLRRSGLVIADLAGESEDPRSVCEHY 73 P + A + V++ P++ ++ A+ +DL L + LV+ D + ED RSV Sbjct: 13 PFVLASMTAVLQG-VPQFAVVHQCANGKDLLDALSKVETDLVVTDFSMTRED-RSV--DG 68 Query: 74 YSLISQYREIH-------WVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL------VK 120 + L+++ R H +V+ +++A L L+S + I L VK Sbjct: 69 FGLLAELRRRHPDVKIVLLTALVNAGIFTRA---LSVGVGALVSKTDSISELARACARVK 125 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 RS + + +++ +M + R LT E +V+RLL G + QIAS L + Sbjct: 126 ISRSPYL-SPAVQSIIHGASMDHPNTSKAR---LTPKELEVVRLLVAGRSLAQIASQLGR 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEM--YAWIN 209 S TIS QK +A R++ S ++ YA+ N Sbjct: 182 SPSTISTQKYNASRKIGATSYTQLIRYAYEN 212 >UniRef50_B1XXC0 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXC0_LEPCP Length = 236 Score = 40.8 bits (94), Expect = 0.043, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +G A SA PA T D S R LT E VLR++GKG +I LL S Sbjct: 148 AGAQGATPSSAQRCGPASTPQADDSVR---LTGREEDVLRMMGKGHKAAEIGRLLAISVN 204 Query: 184 TISAQKNSAMRRLAIHSNAE 203 T++ R+L I S AE Sbjct: 205 TVNGYVREVYRKLGISSRAE 224 >UniRef50_A8G0P8 Two component transcriptional regulator, LuxR family n=16 Tax=Gammaproteobacteria RepID=A8G0P8_SHESH Length = 209 Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Query: 134 AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAM 193 AML S E + L+ E++VL LL KG QI+ L S +TI + M Sbjct: 119 AMLYSHRTFEAQSLKRKLSTLSEREQEVLNLLTKGMTNKQISEALFLSLRTIEVHRAKVM 178 Query: 194 RRLAIHSNAEM--YAWINSAQGAREL 217 ++L +H+ AE+ Y+ ++SA+ E+ Sbjct: 179 KKLEVHNMAELAKYSQMSSAEDLDEI 204 >UniRef50_UPI00018267FE transcriptional regulator, LuxR family protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018267FE Length = 210 Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 147 FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 F + L+ + +++ L KG + QIA+ L+ S KT+ K AM++ + S+ E+ Sbjct: 130 FDCQQKYLSPQQIRIMIGLHKGMTVLQIANKLRISGKTVFTHKYMAMQKFNLRSDYELVL 189 Query: 207 WINSAQGARELNLPSVYGD 225 W+N A + N P+V+ D Sbjct: 190 WMNRL--AEKNNWPAVFRD 206 >UniRef50_C5BZU7 Two component transcriptional regulator, LuxR family n=43 Tax=Actinobacteridae RepID=C5BZU7_BEUC1 Length = 232 Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 33/54 (61%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LT ER+V+RL+ +G+ ++AS L S KT+ ++ +R+L + S E+ W Sbjct: 172 LTAREREVMRLIARGYTYREVASELFISIKTVETHVSAVLRKLQLSSRHELTRW 225 >UniRef50_B3RBW3 Response regulator in two-component regulatory system, transcriptional regulator LuxR n=1 Tax=Cupriavidus taiwanensis RepID=B3RBW3_CUPTR Length = 218 Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +LT E +VLRL G + +IA ++ KTIS QK S MR++ ++ E+ A+ Sbjct: 157 LLTTRESEVLRLYLSGLSVTEIAVRTGRTVKTISTQKQSVMRKIGADNDVELAAF 211 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 18/186 (9%) Query: 31 PEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFM 88 PE E++++AS E L L++L + +V+ D++ + + + + Sbjct: 32 PEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMNGIEATRLIKEEVPHTKVLMLTMH 91 Query: 89 VSRSWYSQAVELLMCPTATLLSDVEPIENL--VKTVRSGNTH-AERISAMLTS----PAM 141 +R + Q ++ +L ++ ++ + +KTV G T+ E ++ L S P Sbjct: 92 DNREYIMQVMQ--AGAMGYMLKEISALKMVQAIKTVHQGATYFCESTTSTLFSQEILPVA 149 Query: 142 TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSN 201 + + S R E +LR++ +G +IA+LL S +T+ + + +L IHS Sbjct: 150 NKPNPLSRR-------EEAILRMVAQGCSSKKIATLLNISYRTVETHRQNIKHKLDIHST 202 Query: 202 AEMYAW 207 AE+ + Sbjct: 203 AELAQY 208 >UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ1_AZOVD Length = 211 Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 9/128 (7%) Query: 86 VFMVSRSWYSQ--AVELLMCPTATLLSDVEPIENL--VKTV-RSGNTHAERISAMLTSPA 140 V M+S +Q AV + L DVEP E L VKTV + G A SA +PA Sbjct: 78 VLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTVAKGGQYDASHPSA---TPA 134 Query: 141 MTETHDFSYRSVI-LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIH 199 F+ + + LT E ++ L+ G + +I + S KT+S K M +L ++ Sbjct: 135 QVADERFANQPHLRLTDREMQIFNLIVTGARLTEIGERILLSVKTVSTYKTRIMEKLGVN 194 Query: 200 SNAEMYAW 207 +NAE+ + Sbjct: 195 NNAELIQY 202 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 21/221 (9%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 +V P+++ GLK + P+ +++ A D L L+ +V+ DL D Sbjct: 8 LVADDHPIVRQGLKTFLDIQ-PDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSDGA 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLL-SDVEP--IENLVKTVRS 124 V + S +R + + S + + E + A L D++P + +++V Sbjct: 67 KVLTRLAA--SDHRA-KVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 125 GNT--HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 G E ++AM T+PA LT ER+VL L+ G +IA L + Sbjct: 124 GQVIFAREAVTAM-TAPAPGPV-------AALTAREREVLALVAAGRSNREIAKQLSVAE 175 Query: 183 KTISAQKNSAMRRLAI--HSNAEMYAWINSAQGARELNLPS 221 KT+ +S R+L + + A +YA + G E L S Sbjct: 176 KTVKTHLSSLFRKLGVADRTQAALYAVTHGMAGHTEGRLES 216 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 40.4 bits (93), Expect = 0.058, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 22/187 (11%) Query: 31 PEYEIISSA--SAEDLTLLQLRRSGLVIADL--AGES-----EDPRSVCEHYYSLI-SQY 80 P+ E+ ++A +AE L LL+ R LV+ DL G S +D ++ L+ S + Sbjct: 33 PDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSGLDLIKDVMALFPETKILVCSMH 92 Query: 81 REIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH-AERISAMLTSP 139 E+ W +R+ + A +M +D V+TV +G + + R++A + Sbjct: 93 DEMLWA---NRTLQAGARGYVMKD-----ADGPTFLTAVRTVLAGQRYMSSRLAASVLE- 143 Query: 140 AMTETHDFSYRSVILTLSERK--VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA 197 + ++ S I LS+R+ V RL G+G +IA+ L S KT+S ++ +L Sbjct: 144 SFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKTVSVHRDHIKEKLG 203 Query: 198 IHSNAEM 204 ++AEM Sbjct: 204 FSTSAEM 210 >UniRef50_B8IGH6 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGH6_METNO Length = 232 Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 8/214 (3%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGES 63 C +V P++ G++ ++R H P+ II A A+ L L + + I D+A Sbjct: 8 CTRVLVADAHPLLLRGVQHLLR-HEPDLSIIGEAISGAQALRLASDLQPDIAILDVALPG 66 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + + + R I +A+ +C S E + + ++ VR Sbjct: 67 LHGSEIRQRLAERAAGTRVIILSGTEEPICAQRALAAGVCGYVLKRSAPETLLHAIRAVR 126 Query: 124 SGNTHAE-RISAMLT---SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +G + + I+ L P T T S LT ER+V+RL+ G+ +IA L Sbjct: 127 TGGLYLDPTIAGQLVPAGGPPATRTSGIDGFSASLTNREREVIRLIALGFTNKEIAGKLG 186 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 + K+I + A +L I + A++ + AQG Sbjct: 187 ITAKSIETYRTRASEKLDIRTRAKIVQY-AMAQG 219 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 40.0 bits (92), Expect = 0.068, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LT E ++LR+L G + QIA+ L S KT+S K AM++L +N E+ + Sbjct: 148 LTHRESQILRMLQAGKSVTQIANELSVSPKTVSTHKIRAMQKLHCQNNVELLKY 201 >UniRef50_B1T3D0 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia RepID=B1T3D0_9BURK Length = 226 Score = 40.0 bits (92), Expect = 0.068, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 140 AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIH 199 ++T+ H S +L+ E V L+ G I +I+ L +S KTIS QKNSA+++L + Sbjct: 144 SLTKRHHLSIE--LLSEKEMAVATLIRDGLSIAEISKRLCRSPKTISNQKNSAIKKLGVR 201 Query: 200 SNAEM 204 ++ E+ Sbjct: 202 NDVEL 206 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 40.0 bits (92), Expect = 0.071, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 11/94 (11%) Query: 119 VKTVRSGNTH-AERISAML----TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 ++TV SG T+ ++A+L +P+ + T DF LT ER++L+L+ + + Sbjct: 115 LETVASGGTYFGPAVAALLRNVVANPSASNTADF------LTDREREILQLVAESHSTKE 168 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 IA+ L S KT+ + + MR+L +H A + + Sbjct: 169 IAAKLGISIKTVDNHRTNLMRKLNLHDVASLTRY 202 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR---RSGLVIADLAGESEDP 66 +++ P+MQ GL++ + H P +EII A + T +Q + LV+ D+ D Sbjct: 41 LIVEDDPLMQLGLEQALSEH-PNFEIIGQAE-DGYTGVQQALELKPDLVVMDIGLPRLDG 98 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL---VKTVR 123 + + + Q IH V + S + ++ V L +E L ++ + Sbjct: 99 IAATKQ---IKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQ 155 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERK--VLRLLGKGWGINQIASLLKKS 181 G T+ + A L + + +++ L LSER+ VL+L+ +G N+IA L S Sbjct: 156 DGATYLDPQIARLVLDNLKSPNPEPNQNIAL-LSERELEVLKLIVEGKSNNEIAEDLYLS 214 Query: 182 NKTISAQKNSAMRRLAIHSNAE 203 TI M +LA+ + Sbjct: 215 TNTIKTHVRGIMNKLAVDDRVQ 236 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%) Query: 110 SDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDF-------SYRSVILTLSERKVL 162 SD E + ++ V +G + + PA+ E F S IL+ E ++ Sbjct: 107 SDPEILLEAIRRVAAGRNYID--------PALAEQMAFDALMPPKSAPHAILSSRELEIF 158 Query: 163 RLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LL G +N IA +L SNKT+S K + + ++ +HS A++ + Sbjct: 159 ALLVAGKRVNDIAYILNISNKTVSTHKLNLITKMKLHSTADLVHY 203 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 39.7 bits (91), Expect = 0.098, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 33/54 (61%) Query: 154 LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +T ER+VL+L+ +G+ +IA L + T+ + + MR+L +HS AE+ + Sbjct: 151 ITARERQVLQLIAEGYTSTRIADRLHLAPSTVEVHRRNIMRKLDLHSVAELTKY 204 >UniRef50_UPI00016AF7F9 capsular synthesis regulator component B n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AF7F9 Length = 225 Score = 39.7 bits (91), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 38 SASAEDLTLLQLRRSGLVIADLA---GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWY 94 S S E + LL+ + ++I D A G+ D S+ + L +Y ++ + + Sbjct: 36 SNSTELVALLERQPCDILITDYAMPGGKFGDGLSLLDF---LRRRYPDLVIIVYTAIDNA 92 Query: 95 SQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVI- 153 + +L C + + VEP ++ +R TH + T + RS+ Sbjct: 93 ALRAAILQCGIYAIFNKVEPPTKVIHAIRDVCTHLA--AHHAPHARATSLGKITERSIPN 150 Query: 154 ----LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 LT E +V+RL G I +IA ++ +TIS QK SA R+L I + ++ +++ Sbjct: 151 ALPKLTRLEAEVVRLYVSGLSIKEIAEQRNRTKQTISFQKESAKRKLNIKRDIDLIRYMS 210 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobact... 332 8e-90 UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter... 252 9e-66 UniRef50_UPI0001913450 putative regulatory protein n=1 Tax=Salmo... 212 1e-53 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 196 4e-49 UniRef50_UPI000197BDC0 two component LuxR family transcriptional... 194 2e-48 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 191 1e-47 UniRef50_Q2L102 Putative two-component response regulator of cap... 189 5e-47 UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa... 188 1e-46 UniRef50_A6V170 Probable two-component response regulator n=1 Ta... 183 3e-45 UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa... 176 4e-43 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_B6VKY7 Pvp response regulator (Two-component response r... 171 2e-41 UniRef50_B4STE5 Two component transcriptional regulator, LuxR fa... 169 5e-41 UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa... 169 6e-41 UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=... 169 1e-40 UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12... 168 1e-40 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 167 2e-40 UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR fa... 167 4e-40 UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ... 162 1e-38 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 160 3e-38 UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR fa... 160 3e-38 UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 160 4e-38 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_C3K5C3 Putative response regulator, receiver domain n=1... 156 8e-37 UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ... 152 8e-36 UniRef50_Q145Q9 Two component transcriptional regulator, LuxR fa... 152 1e-35 UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece... 150 4e-35 UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10... 149 6e-35 UniRef50_B4SIR4 Two component transcriptional regulator, LuxR fa... 149 7e-35 UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa... 148 2e-34 UniRef50_Q1LG72 Two component transcriptional regulator, LuxR fa... 147 3e-34 UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ... 145 1e-33 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 144 2e-33 UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Provide... 144 2e-33 UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=... 144 3e-33 UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa... 142 1e-32 UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin... 141 1e-32 UniRef50_UPI00016A3B5C two component transcriptional regulator, ... 141 1e-32 UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_D2TRD6 LuxR-family transcriptional regulator n=1 Tax=Ci... 139 1e-31 UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR fa... 138 2e-31 UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat... 136 5e-31 UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C... 134 2e-30 UniRef50_B4ELF5 Two-component regulatory system, response regula... 133 5e-30 UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 ... 132 1e-29 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 129 1e-28 UniRef50_Q2T904 Capsula synthesis response regulator transcripti... 124 2e-27 Sequences not found previously or not previously below threshold: UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 165 1e-39 UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece... 164 2e-39 UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa... 162 1e-38 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 161 1e-38 UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa... 161 1e-38 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 157 3e-37 UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ... 154 2e-36 UniRef50_B2U714 Two component transcriptional regulator, LuxR fa... 152 1e-35 UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=... 151 3e-35 UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa... 149 6e-35 UniRef50_UPI00016AF7F9 capsular synthesis regulator component B ... 147 4e-34 UniRef50_B2JLH9 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa... 144 3e-33 UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR fa... 144 4e-33 UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei... 142 6e-33 UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25... 142 1e-32 UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular... 141 2e-32 UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta... 140 3e-32 UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=... 139 9e-32 UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_A9AIC6 Two component transcriptional regulator, LuxR fa... 135 2e-30 UniRef50_B2SXK9 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_C5A924 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_B5WJ97 Two component transcriptional regulator, LuxR fa... 129 1e-28 UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ... 128 2e-28 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 128 2e-28 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 125 1e-27 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 125 2e-27 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 123 5e-27 UniRef50_Q7NVE2 Capsula synthesis response regulator transcripti... 122 7e-27 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 122 8e-27 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 122 1e-26 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 121 2e-26 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 120 3e-26 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 120 4e-26 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 120 5e-26 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 120 5e-26 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 119 6e-26 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 119 8e-26 UniRef50_Q04VJ6 Receiver component of a two-component response r... 119 8e-26 UniRef50_B3RA82 Response regulator protein; Response regulator r... 119 9e-26 UniRef50_B1T388 Two component transcriptional regulator, LuxR fa... 119 9e-26 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 119 1e-25 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 119 1e-25 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 119 1e-25 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 118 2e-25 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 117 2e-25 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 117 2e-25 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 117 3e-25 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 117 4e-25 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 117 4e-25 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 117 5e-25 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 116 5e-25 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 116 5e-25 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 116 6e-25 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 116 7e-25 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 116 7e-25 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 116 8e-25 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 115 1e-24 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 115 1e-24 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud... 115 1e-24 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 115 2e-24 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 115 2e-24 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 114 3e-24 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 114 3e-24 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 114 4e-24 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 113 5e-24 UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin... 113 5e-24 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 113 6e-24 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 113 6e-24 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 113 6e-24 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 113 7e-24 UniRef50_A5FQU5 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 112 8e-24 UniRef50_Q391P2 Two component transcriptional regulator, LuxR fa... 112 9e-24 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 112 1e-23 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 112 1e-23 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 112 1e-23 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 112 1e-23 UniRef50_B1T3D5 Two component transcriptional regulator, LuxR fa... 112 1e-23 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 112 1e-23 UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator rece... 112 1e-23 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 112 1e-23 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_Q07MS7 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_A6GSJ6 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 111 3e-23 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_A6C9W9 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 110 3e-23 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 110 4e-23 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_B1T3D0 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 110 4e-23 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_C7LUF3 Two component transcriptional regulator, LuxR fa... 110 5e-23 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 110 5e-23 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 110 5e-23 UniRef50_Q470N3 Two component transcriptional regulator, LuxR fa... 110 6e-23 UniRef50_B4STD4 Two component transcriptional regulator, LuxR fa... 110 6e-23 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 109 7e-23 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 109 7e-23 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 109 7e-23 UniRef50_A0M543 Two-component system response regulator n=3 Tax=... 109 8e-23 UniRef50_C2G4N5 Response regulator n=2 Tax=Sphingobacterium spir... 109 8e-23 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 109 8e-23 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 109 9e-23 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 109 9e-23 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 109 1e-22 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 109 1e-22 UniRef50_B1T1G9 Two component transcriptional regulator, LuxR fa... 109 1e-22 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 109 1e-22 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 109 1e-22 UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=E... 108 1e-22 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 108 1e-22 UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Ye... 108 2e-22 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 108 2e-22 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 108 2e-22 UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa... 108 2e-22 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 108 2e-22 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 108 2e-22 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 108 2e-22 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 108 2e-22 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 108 2e-22 UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrh... 108 2e-22 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 108 2e-22 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 108 2e-22 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 108 2e-22 UniRef50_C7PRP4 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anth... 107 3e-22 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 107 3e-22 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 107 4e-22 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 107 4e-22 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 107 4e-22 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 107 4e-22 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 107 4e-22 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 107 4e-22 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 107 4e-22 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 107 5e-22 UniRef50_C0BG71 Two component transcriptional regulator, LuxR fa... 106 5e-22 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 106 6e-22 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 106 6e-22 UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=... 106 6e-22 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 106 6e-22 UniRef50_A3XI64 DNA-binding response regulator, LuxR family prot... 106 7e-22 UniRef50_C4ZL17 Two component transcriptional regulator, LuxR fa... 106 7e-22 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 106 7e-22 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 106 8e-22 UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh... 106 8e-22 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 105 8e-22 UniRef50_A4SZV7 Two component transcriptional regulator, LuxR fa... 105 8e-22 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 105 9e-22 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 105 9e-22 UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR fa... 105 9e-22 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 105 9e-22 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 105 1e-21 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 105 1e-21 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 105 1e-21 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 105 1e-21 UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS 105 1e-21 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 105 1e-21 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 105 1e-21 UniRef50_B8IGH6 Two component transcriptional regulator, LuxR fa... 105 1e-21 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 105 1e-21 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 105 2e-21 UniRef50_C1ZGK9 Response regulator containing a CheY-like receiv... 105 2e-21 UniRef50_Q31FU6 Two component transcriptional regulator, LuxR fa... 105 2e-21 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 105 2e-21 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 105 2e-21 >UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobacteriaceae RepID=YJJQ_ECO57 Length = 241 Score = 332 bits (850), Expect = 8e-90, Method: Composition-based stats. Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA Sbjct: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK Sbjct: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK Sbjct: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH Sbjct: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 Query: 241 S 241 S Sbjct: 241 S 241 >UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter RepID=C9XUX8_CROTZ Length = 238 Score = 252 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 126/231 (54%), Positives = 165/231 (71%), Gaps = 1/231 (0%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPG CK GI+IS+IPV+ GL +M HFPE E+ S+ D+TL L +V+A+L Sbjct: 1 MLPGRCKQGIIISQIPVVHTGLAAIMSRHFPETELYHYNSSADITLPLLNPVDMVLAELP 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 E+ R CE YYSL++Q +HW+F+V + +S AV+LLM P TLLS EP+E +V Sbjct: 61 CAPEEARRECEAYYSLVAQAPGVHWIFLVPAASFSMAVQLLMRPETTLLSTAEPVEGVVN 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 V+ G AER+S ML +P + + + +V+LT SE++VLRLLGKGWGINQIA +LKK Sbjct: 121 AVQLGREKAERVSQMLVTPRQAQEKEPAA-AVMLTTSEKQVLRLLGKGWGINQIAQMLKK 179 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNT 231 SNKTISAQKNSAMRRL++ NAEMYAWI+S QG +ELNL S++ + AEWNT Sbjct: 180 SNKTISAQKNSAMRRLSLRGNAEMYAWISSLQGLKELNLLSLHKEQAEWNT 230 >UniRef50_UPI0001913450 putative regulatory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. M223 RepID=UPI0001913450 Length = 208 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 106/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPGCCKNG++ISK P++Q GLK + +FP+Y++ + E+LTLLQLRRS LVIADLA Sbjct: 1 MLPGCCKNGLIISKTPLIQEGLKGAITGNFPDYKLAYCRTIEELTLLQLRRSNLVIADLA 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + PR++CE++YSLISQYR+IHWVF+V +S Y AV+LLM P +TLLSD EPIENL+ Sbjct: 61 VNNASPRAICEYFYSLISQYRDIHWVFLVPKSCYPHAVDLLMGPVSTLLSDEEPIENLIS 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSY-RSVILTLSERKVLRLLGKGWGINQIASLLK 179 + +GN +ERIS L SP + S+ R ++LTLSERKVLRLLGKGW + ++ LK Sbjct: 121 VIHAGNARSERISKTLLSPQVPSEIQQSHDRPIVLTLSERKVLRLLGKGWALTKLRRYLK 180 Query: 180 KSNKTISAQKNS 191 K K ++ +K + Sbjct: 181 KVIKQLAPKKIA 192 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ P++ G++ +M P EI++ A+ +E L L+I D + ++D Sbjct: 6 ILADDHPIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQHECDLLITDFSMPNDDNV 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L +Y + + + L+ LL I L TV+ + Sbjct: 66 DGMAMIKQLRRKYPNLPIIVLTQVHNLGVLQALMQIGINGLLLKKSVIAELANTVKKVLS 125 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + I + + + + L+L E +V+RLL G + Q+AS L +S KTIS Sbjct: 126 GSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVKTIST 185 Query: 188 QKNSAMRRLAIHSNAEMYAWINSA 211 QK +AM++L + S++E++ + Sbjct: 186 QKTNAMQKLGLKSDSELFHYAQQQ 209 >UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0 Length = 217 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 7/204 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ P++ +GLK+ + +I+ + AE L+ +++ D + Sbjct: 7 VLVDDHPIVLSGLKDTLSQSM-NLDILGAYTQDAELFAFLKKNEVDVIVTDYMMPNNTQS 65 Query: 68 SVCEHYYS-LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV-RSG 125 S ++Y L QY I + + S L + ++S P+ +L+K + +G Sbjct: 66 SDGQNYIQFLRRQYPNIAVIVLTMVSNPMIVQMLYDSGVSAVVSKEAPLGDLMKAITLAG 125 Query: 126 NTHAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 R+ + + + + R L+ E +VLRL +G I IA L +S+K Sbjct: 126 QGRQYRVPVADMTTTLKSRNAVTLNDRVKTLSPRELEVLRLFVQGKPIVDIAKQLNRSDK 185 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 TIS QKN+AMR+L + +N + ++ Sbjct: 186 TISLQKNAAMRKLGVDNNQALISY 209 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 8/227 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +V PV+ G ++ + F +++ A S E + +LQ +++ DLA Sbjct: 8 VVADDHPVILFGAEQALLK-FQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQYG 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + ++ V + + L ++++ + + ++ V+ + Sbjct: 67 DGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHVSR 126 Query: 128 HAERISAMLTSP--AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 H E +S + S + VIL+ E +V+RL G I +I+ L +S KTI Sbjct: 127 HIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIKTI 186 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTA 232 S QKN+AMR+L + ++E++ + AQ +NL S AA+ T Sbjct: 187 STQKNTAMRKLGLERDSELFQY---AQSNGLMNLSSYAPGAADTGTG 230 >UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1 Tax=Bordetella avium 197N RepID=Q2L102_BORA1 Length = 231 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 11/217 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ P + AG++ ++FP E++ A S E ++LL+ +V+ D A Sbjct: 6 ILADDHPALLAGIQHQF-SNFPTLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGRFS 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS--- 124 L Y I + + + + EL +L+ V +LV + + Sbjct: 65 DGMALILYLRRIYPNIKLIVFTAMDNGAISQELAKLGVHAVLNKVNDTNHLVSAIHAAYA 124 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 G+T+ A P + L+ E +V+RL G + +IA L ++ +T Sbjct: 125 GSTYYRPNQARTPRPEAEQ-----SEFKPLSRRELEVIRLYISGLSVQEIADQLHRTKQT 179 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 IS+QK+SAMR+L I +A+++ + A + ++ S Sbjct: 180 ISSQKSSAMRKLDITRDADLFRFAYEISAASQEDISS 216 >UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=A9BU04_DELAS Length = 217 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 18/208 (8%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS---GLVIADLAGESEDPR 67 V+ V+ G+K+ + P +++++ S +L+Q RS +V+ D + +D Sbjct: 9 VVDDHAVVLLGVKDFLEQD-PNLQVVATFSTPS-SLMQYARSNPLDVVLTDYSMPGDDVY 66 Query: 68 SVCEHYYS-LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 Y LI + +I + + + S L A +L +P+ ++ ++ Sbjct: 67 GDGLRYVDYLIRHFPDIKVLVLTTVSNPMIISALYDAGVAGVLLKEDPLTQIMAALQCV- 125 Query: 127 THAERISAMLTSPAMTETHDFSYRSVIL-------TLSERKVLRLLGKGWGINQIASLLK 179 R++A SP+ RSV L + E +VLR G I +IA+ L+ Sbjct: 126 ----RLNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIAARLR 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAW 207 +S KT+S QKNSAMR+L + SN ++ A+ Sbjct: 182 RSVKTVSLQKNSAMRKLNVDSNQDLAAF 209 >UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V170_PSEA7 Length = 213 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 7/205 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 +++ + G++ ++ F + +I+ A D LT L L+I DL Sbjct: 6 LLVDDHALTLIGMRCLL-GAFDDLQIVGQAQDADGLLTQLDTHPCDLLITDLMMPDSQQA 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + +Y ++ + + + + LL L+S + +L K +R G Sbjct: 65 DGLRLVQKVRRRYPQLQIIVVTMLNNPALISSLLKLGIRGLVSKRGVLNDLPKAIRHGGR 124 Query: 128 H---AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + I +L A + LT E +VLRL G G I +IA L +S +T Sbjct: 125 RPFLSHSIGHLLDVGAAEHGKPLA-SLEELTPREVEVLRLYGSGLAIGEIALRLCRSKQT 183 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWIN 209 ISAQK+SAMR+L + +NA +Y +I Sbjct: 184 ISAQKSSAMRKLGLDTNAGLYLYIQ 208 >UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B1Z6J3_BURA4 Length = 225 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 3/200 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 I + P+ AG++ V ++ + D + + +V+ D A R Sbjct: 9 IFANDRPLSLAGMEYV-AGKANAINLVGVCRSSDTLIDSISRIHCDVVLIDYAIRGNGKR 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L Y ++ V +V+ +L +L+S ++ + ++V + + Sbjct: 68 EGMALLGYLRRTYPQVGMVVLVTHENPVIIQAILDLGVESLVSKLDDVGHIVTAIHACYG 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S + + D + L+ E +V+RL G INQIA L + TIS+ Sbjct: 128 GGSYLSPQIKRSLASSGGDGRRPPLRLSPREIEVIRLYLSGMTINQIAGRLNRGKPTISS 187 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 QK SAM++L + + E+ + Sbjct: 188 QKISAMKKLGVKGDVELVRY 207 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 92/223 (41%), Gaps = 8/223 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P + G + + +++SA S E + L ++++D A + Sbjct: 10 VIADDHPAVVIGARYELSAT-NTLAVVASANNSTELMETLANHPCDVLVSDYAMPGTEYG 68 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + +++ +Y + V M LL A ++S + +L + + T Sbjct: 69 DGLAMFSAILKRYPNLRIVVMTMMENAVALRALLDLGIACVVSKSDMTSHLTMAIHAAYT 128 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + +S + + + ++ L+ E +V+RL G +N IA L +S KTIS Sbjct: 129 NGRYLSPSMDR-ILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTIST 187 Query: 188 QKNSAMRRLAIHSNAEMYAWINSAQGARELN----LPSVYGDA 226 QK+SAM++L I + ++ + + + LP+V Sbjct: 188 QKSSAMQKLGIERDVDLVRYAIACGLVSDYGYATALPAVDEPP 230 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P G++ + + P + SA S E + LL ++++D A Sbjct: 9 VLADDHPATLGGVQHGLSSV-PTIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPGGAYG 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS--- 124 + L Y + V + + LL + ++S + +++L+ V + Sbjct: 68 DGIALFSYLQRNYPAVKLVVLTMLDNPAVIKGLLGLGISCIVSKSDAVDHLIPAVHAAAT 127 Query: 125 -GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 G ++ ++ + + + ++ L+ E +V+RL G +N+IA L +S K Sbjct: 128 GGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKLSRSKK 187 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEW-NTAELRRE 237 TIS QK AM++L + + ++ + A + P G AAE E R + Sbjct: 188 TISTQKARAMQKLGVEKDIDLLRY---AMEHGIVAAPGGEGKAAEQDGEGEGRTD 239 >UniRef50_B6VKY7 Pvp response regulator (Two-component response regulator bvg protein) n=2 Tax=Photorhabdus RepID=B6VKY7_PHOAA Length = 208 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ PV GL+ V+ T Y+++ A +LL+ + ++I D ++ Sbjct: 6 IIADDHPVFLLGLRTVLATLPENYQVVGEAHDVTALFSLLEEKEVDMLITDFNMPGDNQI 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN- 126 + +Y + V + S L+ +L+ LVK + S Sbjct: 66 DGLRMISRIRERYPSLPIVVITMISDRKIIASLIDYKVKAILNKNSLSHELVKGLYSTTG 125 Query: 127 THAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 H +S E LT E +V++LLG+G +N IA+ L ++ +TIS Sbjct: 126 CHEPYLSEQFLESPGEEVVK------ALTSKELEVIKLLGQGLSVNDIAARLYRTKQTIS 179 Query: 187 AQKNSAMRRLAIHSNAEMYAWIN 209 AQK SAM++L +++ A +Y +++ Sbjct: 180 AQKISAMKKLGLNNEAALYNYLH 202 >UniRef50_B4STE5 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STE5_STRM5 Length = 208 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 5/203 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ PV+ G++ V++TH +++ SA AE L L+ V+ DL+ P Sbjct: 6 IIADDHPVVLHGIRVVLQTHL--MDVVGSACDGAELLQLVDNNDCDAVLTDLSMPGAGPD 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E +L +++ + V + LL + L+ L + + + Sbjct: 64 GP-ELIDALRARHPGLPVVVLTGARHPGLLDGLLREGISGLVDKCADFTELPQALSAALA 122 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S L F L+ E++VL LL G +N +A +S KTIS Sbjct: 123 GQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLLAAGLSVNAVAERCGRSPKTISR 182 Query: 188 QKNSAMRRLAIHSNAEMYAWINS 210 QK A R+L + +N E++ ++ + Sbjct: 183 QKAEAKRKLGLQNNQELFDYLQT 205 >UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JCS9_BURP8 Length = 236 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 9/204 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ P++ ++ +M FP EI+ A S+E Q + LV+ DL Sbjct: 14 IIADDHPLVLLAMENLMSG-FPNIEIVGKATDSSELFAEAQRVKCELVVMDLYMPGGLHG 72 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIE----NLVKTVR 123 E ++ ++ V + + +++ ++S + I+ ++ + Sbjct: 73 DGVEMVRQFKERHPDVVVVVLTMETSADALQKVIALGVGAVVSKRDRIDLIHVAIITALA 132 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 I A+L ++ D+ +L+ E +VL G G+ +IA L +S K Sbjct: 133 RECYVGPAIRALLADATLSRRIDYVR--QVLSRRELEVLTHYATGRGVTEIAMRLGRSVK 190 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 TISAQK +AMR+L++ S+A+++ + Sbjct: 191 TISAQKCTAMRKLSLQSDADLFRF 214 >UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK Length = 220 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 10/201 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ PV G+K + P EI++ S + +L +++ D S Sbjct: 9 VIADDHPVSVHGMKAALSA-MPTIEIVAVTSDTTSLVDMLDAHACDVLVLDYVMPSGKYG 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L ++ + +V + + + L +++S +P+ +L+ + + ++ Sbjct: 68 DGQTLLSYLSRRFPTLRYVTVTMLNSPAVFRALQELGVNSIVSKSDPMSHLIAAIHAAHS 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSV--ILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 SP + + + + L+ E +++RL +G+ + +IA L +S KTI Sbjct: 128 GG-----RYLSPTIASLLERTESAAGATLSKRETEIVRLFREGYKVTEIAEKLHRSKKTI 182 Query: 186 SAQKNSAMRRLAIHSNAEMYA 206 SAQK +AMR+L + S+AE+ Sbjct: 183 SAQKLAAMRKLGVTSDAELIR 203 >UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas RepID=Q4KHP5_PSEF5 Length = 220 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 6/205 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 I+ P+ GL+ V+ I+ AS+ L+Q +++ D +E Sbjct: 12 ILADDHPIFLIGLRAVLEQD-DSLAIVGEASSPSALAQLMQEIECDVLVTDFMMPAEQQN 70 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L ++ ++ V + + +L LLS + L + Sbjct: 71 DGLRLIEQLRRRHPDLPIVVVTMLNHPGLFRSILDLGVTGLLSKASLADELPTAIARARQ 130 Query: 128 HAERISAML---TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 H I+ + S A D S L+ E +V+RLL G + +IA+ L +S +T Sbjct: 131 HKPYIAQAIKQALSLAGEVGPDRLVSSDQLSPRELEVIRLLAAGHAVGEIAAQLNRSKQT 190 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWIN 209 +SAQK SAMR+L + S A +Y ++ Sbjct: 191 VSAQKVSAMRKLGLSSEAALYIYVQ 215 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 10/202 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR----RSGLVIADLAGESED 65 ++ PV+ AG++E + E I A AED T L + + D + Sbjct: 6 VIADDHPVILAGVREALGN---EPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGGK 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L ++ I V + + A +++ +PI L +R+ Sbjct: 63 YGDGVALLGFLRRRFAGIPLVVLTGVGGTQVLASIRKAGVACIVAKADPISELASAIRAA 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +SA + + LT E +VLRL+ +G +IA+ L++S +TI Sbjct: 123 RKGEGYLSAD-VERQLASRPEGGEAH--LTKREAEVLRLIAEGLSQTEIAAQLQRSRQTI 179 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S QK+SAMR+L + AE++ + Sbjct: 180 STQKHSAMRKLGMQRPAEIFEY 201 >UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3E5_DESAC Length = 263 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 20/223 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLA-GESEDP 66 +++++ PV++ GL ++R +P+ E++++AS L QLR++ +V+ DL E P Sbjct: 38 LIVAEFPVVEEGLDYLLRD-YPDIEVVATASNGVEGLEQLRKTPIDIVVHDLCSVELGGP 96 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 ++ + + + ++ + S+S E L + I+ LV +R + Sbjct: 97 EAITLY----LEEKPQLGVIEYSSQSDEVAVFESLKAGARGYVLKSSSIDELVNAIREVH 152 Query: 127 THAERISAMLTSPAMTETH--------DFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 ISA L +PA+ + + D +LT E++V RLL G ++I+ +L Sbjct: 153 QGGYFISAEL-NPAIIQFYLDHRENASDQLSEYQLLTDREKQVFRLLANGKQTHEISEIL 211 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 S KT++ + + ++L++++ AEM + A +NLPS Sbjct: 212 CISPKTVAKHRAAVKKKLSLNTTAEMAKY---AIQIGVINLPS 251 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 3/200 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P + AG++ V+ E EI+ A S E ++ L+ +++ D + Sbjct: 9 LIADDHPAVLAGIESVLEDKH-EIEIVGRAKNSTEIISFLKKNECDVLVTDYSMPGGAYG 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + V + L ++ + + +L+ + + T Sbjct: 68 DGLVMLNVIRKRFPSVKIVMLTMIENIGIIKSLTNQGIYRIVHKTDSLGSLLPAIYAAYT 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + IS + E S+ L+ E +VL L G +++IA L +S KT+S Sbjct: 128 DGQFISPSASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTVST 187 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 K + M +L I + ++ + Sbjct: 188 HKVAVMNKLGIRKDIDLIRY 207 >UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21 Tax=pseudomallei group RepID=C4I5I0_BURPS Length = 242 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 7/224 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 IV P + AG++ + + +AS E + LL R ++I D A Sbjct: 18 IVADDHPALIAGIEHALSKS-SAISVAGTASNSTELVDLLARERCDILITDYAMPGGSHG 76 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + ++ + + + + +++ ++ I+NL+ TV++ Sbjct: 77 DGLGLLSFLRRHHPDLKIIVFTAIDNPALIASMARLGARAIVNKMDHIDNLIATVQAVYA 136 Query: 128 HAERISA---MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 A + A S + + L+ E +++RL G +N+IA+ L +S + Sbjct: 137 GASCLPAGIGAFASSRLPVDGEAPEIERQLSARELEIVRLYVSGLSVNEIAAYLHRSKQA 196 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAE 228 +S QK +AMR+L I +A ++ + G +PS +A+ Sbjct: 197 VSTQKMNAMRKLGIERDAGLFRYAYET-GLMAAGVPSASPVSAQ 239 >UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex RepID=A2WHU0_9BURK Length = 204 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 3/174 (1%) Query: 36 ISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYS 95 + S E + LL+ +++ D A + L ++ + + + + + Sbjct: 4 TARNSTELIELLERSPCDVLMTDYAMPGGEYGDGLSMLALLRRRFPLLKIMVLTAGISPA 63 Query: 96 QAVELLMCPTATLLSDVEPIENLVKTVR---SGNTHAERISAMLTSPAMTETHDFSYRSV 152 E+ ++L+ V+ I +L+ + +G + + L A +E + Sbjct: 64 IVSEIARIGIRSVLNKVDDIGHLITAIHTVFAGAAYYSPGAQNLAHAAASEYMPDTMSGT 123 Query: 153 ILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 LT E +VLRL G IN+IA+ ++++ +TISAQK AM++L + + +++ Sbjct: 124 SLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFR 177 >UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LDE9_RALME Length = 214 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 3/200 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ PV+ G++ + +E++ +A S E L LL + +++ D + Sbjct: 5 LIADDHPVVVNGIRRELGDEV-GFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSATG 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + V + + + + +LS + + +L +R+ Sbjct: 64 DGLPMLQLIRRRHPAVRIVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAAFV 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ + + + D L+ E +V+R G + +IA +S+KTISA Sbjct: 124 GIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKTISA 183 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 QK+ AMR+L + S+ E+Y + Sbjct: 184 QKSMAMRKLGLTSDYELYQY 203 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 82/204 (40%), Gaps = 5/204 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 IV P++ G+++ + + P +++ A LL+ +++ D + Sbjct: 6 IVADDHPLIIFGVRQALASA-PGIRVVADAPDPGALTELLRNVPCDVLVTDFSMPCGATP 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 SL ++ + V + V + +++ + + L + + Sbjct: 65 DGLAMLTSLRQRFPHVRVVVLTMLENAGLMVSMQDVGVLGIVNKRDDLSELPAVIAAAFR 124 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S + H S R L+ E +V+R+ G +++A L +S TI Sbjct: 125 RRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSINTI 184 Query: 186 SAQKNSAMRRLAIHSNAEMYAWIN 209 S QK +AMR+L + ++AE++ + Sbjct: 185 STQKTNAMRKLGVSNDAELFDYAQ 208 >UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS Length = 231 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 11/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR----SGLVIADLAGESED 65 ++ P + +G++ + + E EI+ AS + T L + ++++D + + Sbjct: 16 LLADDHPGIISGIRHELSS---ELEILLKASVSNSTDLVKKLDEGGFDVLVSDYSMPTGQ 72 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS- 124 + + ++ + V + + L +++S +P+ +LV + + Sbjct: 73 YGDGLNLFGYISRRFPNLGLVVLTMLDNSAILQALGKVSNISIVSKADPVLHLVPAIHAA 132 Query: 125 ---GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 G + IS L +L+ E +V+RL G I++IA+ L +S Sbjct: 133 YTGGTYFSPAISERLEKMNAGVMGGEGKSPGVLSPKESEVVRLYAAGLRIDEIAAKLNRS 192 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 KTIS QK AM +L I + ++ + Sbjct: 193 KKTISTQKVKAMHKLGIERDIDLMKY 218 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 6/210 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P+M G + ++ + E++ A S+E +++L +VI D + + Sbjct: 6 VLADDHPIMLLGCRLLIEQN--GMEVVGEARDSSELMSILAHVACDVVITDFSMPNTGRA 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 +L ++ + + + + + +L ++ L VR+ Sbjct: 64 DGLAMLSTLRREHGALPVIVLTNMANAGLLRAMLNEGVLGIVEKGAEKSELFAAVRTALR 123 Query: 128 HAERISAMLTS--PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 A ISA L + T S R+ LT E +VLRLL G ++ +L ++ KT+ Sbjct: 124 GAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRLLASGKSPTEVGQMLHRTIKTV 183 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S K SA R+L + S+AE+Y ++ + Sbjct: 184 SWAKTSAKRKLGLKSDAELYEYVVNLGLNG 213 >UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR family n=34 Tax=Proteobacteria RepID=A9AQJ5_BURM1 Length = 224 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 11/212 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGES 63 C +V P G+ V+ E++ S S + + L+ + S +++ D Sbjct: 5 CVRVMVADDHPSSAIGMSRVLAES-STIELVGTVSNSTDLVAALEEKPSDVLVLDYVMPG 63 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 L +Y + V + S + +LS + I +LV V Sbjct: 64 GKFGDGLVLLSFLQRRYPALRIVTITMIDNPSVLHAIRRQGVGCILSKSDAISHLVGAVH 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSV---ILTLSERKVLRLLGKGWGINQIASLLKK 180 + + A SP + D + SV LT E +V+RL G + +IAS L + Sbjct: 124 A-----AFVCADYQSPHIRHLLDSAGSSVTERRLTTREIEVVRLYAAGLTVGEIASQLHR 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S +TIS+QK SAM++L I +A++ + + Sbjct: 179 SKQTISSQKASAMKKLGIVRDADLIRFADEGM 210 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 4/205 (1%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 N I+ P++ G+++ + ++ S + L + ++I DL+ + Sbjct: 5 NVIIADDHPIVLFGIRKSLEQI-EWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + + + + +L ++ +L K + Sbjct: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA-LAA 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ + S + + Y L+ E +VLRL +G+ + +IA L +S KTI Sbjct: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINS 210 S+QK SAM +L + ++ + +++S Sbjct: 183 SSQKKSAMMKLGVENDIALLNYLSS 207 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 5/207 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 I+ PV++ G + V+ + ++ A + +TLL + L++ D + Sbjct: 6 IIADDHPVVRIGTRAVIESSGVG-RVVGEADSAQALMTLLGSQPCDLLVTDYSMPGSPQA 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ ++ + + + + +L L+ ++ L + +++ Sbjct: 65 DGFAMIGMIRRRHPDLPVLMLSVSNNLAILRMVLDSGVLGLVDKSSSMDELPQAIQAVYR 124 Query: 128 HAERISAMLTSPAMTETHDFSYRS--VILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 IS L L+ E +VLRLLG G + +I+ L KS TI Sbjct: 125 GQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRLLGTGMTVKEISLQLHKSVSTI 184 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S QK AM +L + +AE++ ++ + Sbjct: 185 SRQKGDAMLKLGLKGDAELFDYLRDGK 211 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 157 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 4/200 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 ++ P++ G++ ++ + I+ A L L +VI D A + Sbjct: 6 LIADDHPLVLLGVRHMLAG-MGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQPAA 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++ Y + + + + +LS ++ L + + + Sbjct: 65 DGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAAVYQ 124 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + A + L+ E +V+RL G + IA+ +S KT+S Sbjct: 125 GRPFVGTHAGA-AGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKTVST 183 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 K++AM +L + S+ +++ + Sbjct: 184 HKHNAMGKLGLKSDVDLFMY 203 >UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C3_PSEFS Length = 211 Score = 156 bits (393), Expect = 8e-37, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 3/204 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 I+ P+++ G K V+ + + +++ A D L L+Q +++ D A Sbjct: 5 IIADDHPIVRIGQKVVIEAN-GKCKVVGEADGPDQLLALVQRTPCDVLVTDFAMPGNQQA 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L Q+ ++ + + + + +++ L +++ Sbjct: 64 DGYGLLGLLHRQHPDLPVILVTMFANVATLRSSFSHGARAIVAKSASARELPLAIKAVCE 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S L L+ ER+V+R+L G ++QIA+ + +S TIS Sbjct: 124 GHTFVSECLRLQLEEAGVGDQQGMPQLSGKEREVVRMLASGMTVSQIAARVNRSISTISK 183 Query: 188 QKNSAMRRLAIHSNAEMYAWINSA 211 QK++AM RL I ++ +++A+ S+ Sbjct: 184 QKSTAMSRLCISTDVDLFAYARSS 207 >UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM Length = 210 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPRS 68 ++ V++ G + + I++S D + LR + I DLA D R Sbjct: 16 LLDDHEVVRRGTALHLSRDV-RFRIVASHGHSDAFIQDLRRTPVDVAIIDLALARGD-RD 73 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E L + + + + + S L+ ++S EP+ L + + + Sbjct: 74 CMELVGLLRAAFPAVPLLAFATLSPGIHIGPLIDAGVRGVVSKAEPLPLLSEAIVRVSLG 133 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 +R+ +PA +E L+ +ER+VL LL G +++IA +S KT+S Q Sbjct: 134 LDRLPPDCRNPADSED---------LSRNEREVLHLLLAGLTVSEIAQQRHRSIKTVSTQ 184 Query: 189 KNSAMRRLAIHSNAEMYAWINSAQGA 214 K +A+R+L + ++AE+YA + Sbjct: 185 KKAALRKLGLRNDAEIYAMRQQLESL 210 >UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14 Length = 212 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 5/204 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 I+ PV+ G K ++ ++ A E +L+ L++ D A + R Sbjct: 6 IIADDHPVVLLGAKIIVEKGGSGL-VVGQAENPEELEAILKSTPCDLLVTDFAMPNS-RR 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + E+ + + S S + +L ++ L++ ++ Sbjct: 64 DGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNLGIQGVVEKNADQFELIEAIKKVAR 123 Query: 128 HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 H IS A +F SV L+ E +V+RLL G Q+A L +S KTIS Sbjct: 124 HQRYISPFFREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAEKLSRSIKTIS 183 Query: 187 AQKNSAMRRLAIHSNAEMYAWINS 210 K SA +L I ++AE+Y + + Sbjct: 184 WTKVSAKTKLGIKTDAELYQYARN 207 >UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM Length = 223 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 11/202 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPRS 68 + P++ G + V+ + +++ A + L +L LV+ D + Sbjct: 7 IADDHPLVLLGTRIVIEAG-GRHRVVAEARCAESLLAVLAEEPVDLVVTDFSMPDGGRSD 65 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLL---SDVEPIENLVKTVRSG 125 +L + ++ + + + + L+ S V+ I V TV SG Sbjct: 66 GQAMLQALRRNHPKVPVILATMVTNATTLNMAMRTGVRGLVCKGSGVDGIRRAVDTVLSG 125 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + + A A E +L+ E +VLRL G I +IA+ L+++ TI Sbjct: 126 GIYLDPELAHCLQDAGRER-----SLSVLSPKELEVLRLYVSGPSITEIAAQLRRTVSTI 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S Q+ SAMR+L I ++AE++A+ Sbjct: 181 SRQRISAMRKLGISNDAELFAY 202 >UniRef50_Q145Q9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=Q145Q9_BURXL Length = 225 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 4/203 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 IV ++ G+K+++++ P E + A + LL +V++D+ Sbjct: 19 IVADDHDCVRVGVKQMLQSV-PHIEFVGEAADTHGLAELLDACACDVVVSDITMPGIHGG 77 Query: 68 SVCE-HYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 S L+ V + LL ++ E + L+ + + Sbjct: 78 SNAVPFLRRLLRGRPHPCVVVLTMICHAHMLTGLLHIGVGGIVDKRETVTALIDAIEAAF 137 Query: 127 THAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + +SA + R+ +L+ E ++ +L +G ++QIA+ L++S KTIS Sbjct: 138 SGHVYLSAHARAAIEMADAPPQLRAGMLSAREWEIFQLYVQGLAVHQIAARLQRSGKTIS 197 Query: 187 AQKNSAMRRLAIHSNAEMYAWIN 209 QK SAMR+L + + A++ + Sbjct: 198 TQKRSAMRKLGLETEADLIDYAR 220 >UniRef50_B2U714 Two component transcriptional regulator, LuxR family n=5 Tax=Ralstonia RepID=B2U714_RALPJ Length = 215 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 4/204 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ PV+ GL + FP+ ++++ A E + +L +++ D E Sbjct: 8 VLADDHPVILMGLAAAIGQ-FPQQQVVAQAHDGRELMQVLAHIDCNVIVTDYNLGGEPAF 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + L Q+ V + + A ++S + + V + Sbjct: 67 DGMQLLVRLRQQHPRCGIVVCTMVHNPALLRGMRQIGVAGIVSKNDDFVHAGHAVMAAAR 126 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 S + A ++D L+ ER+VLRL G ++ IA +L S KT+S Sbjct: 127 GVRYDSPRILEEAGLGSNDR-NGFERLSAREREVLRLYAAGTAVSDIAQMLGSSVKTVST 185 Query: 188 QKNSAMRRLAIHSNAEMYAWINSA 211 QK A+R+L + +++ + ++ Sbjct: 186 QKAVALRKLGLVREIDLFQYARAS 209 >UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY57_COMTE Length = 201 Score = 151 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 2/196 (1%) Query: 18 MQAGLKEVMRTHFP-EYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSL 76 M GL ++++ + +S+S E + L +VI D + L Sbjct: 1 MLMGLGDLLKQNIHLTLTATASSSTELVAALTKSLPDIVIVDYHMPDSQYGDGIKFIGYL 60 Query: 77 ISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAML 136 + Q+ + + + S L ++ + + K +R + Sbjct: 61 LRQFEGLKVIVLTMLSNPMIVKALYKAGVKGVVFKQDDPSEVFKAIRLVSLGNIYTPPSF 120 Query: 137 TSPAMTETHD-FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRR 195 ++ H R LT E +VLR +G + +IA L +S KT+S+QK +AMR+ Sbjct: 121 LETNVSLQHQMLQERFKSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMRK 180 Query: 196 LAIHSNAEMYAWINSA 211 L SN E+ A+ ++ Sbjct: 181 LEAKSNQELMAFCLNS 196 >UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM Length = 199 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 10/199 (5%) Query: 17 VMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYY 74 +++ G++ V+ P I +A S E + LLQ +++ D A Sbjct: 1 MIRLGVQSVL-DEAPALHCIGAAQDSTELVALLQREPCDVLVTDYAMPGGAHGDGLALLD 59 Query: 75 SLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISA 134 L + + ++ V M S L ++S + ++++ V + + Sbjct: 60 YLGAHFPQLRIVVMTGLDQPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMA-----AYANR 114 Query: 135 MLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSA 192 SP++ E D R+ L+ E++V+ L G + +IA L + +T+S QKN+A Sbjct: 115 RFLSPSVAEILDRREQRRATALSPREQEVVELFIAGLSVAEIARKLDRKKQTVSTQKNNA 174 Query: 193 MRRLAIHSNAEMYAWINSA 211 MR+L I +AE+ + Sbjct: 175 MRKLGIERDAELLTFAADL 193 >UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6 Tax=Ralstonia RepID=B2UFA9_RALPJ Length = 222 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 9/215 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 ++ P + A ++ ++ +E++ AS D L +L R L I D A Sbjct: 8 VIADDHPGVVAAVRRLVSGVH-GFEVVGEASNADELLAVLARVRCDLAITDYAMPGSRYG 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L+ ++ ++ + + + +L ++S + +++++ +++ Sbjct: 67 DGIILLEFLMRRHPDLRVMVLTMLETRALMSNILRAGIKVIVSKSDEPQHILEGMQAAVD 126 Query: 128 HAERISAMLTSPAMTETHDFSYRS----VILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +S +L + + + L E +VLR+ G +++IA L +S K Sbjct: 127 GRIYLSPLLNAKLLCRNGEPQPAHDDPVAKLGKRELEVLRMYVTGKTVSEIAQQLNRSVK 186 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI--NSAQGARE 216 TIS+QK +AMR+L + + A ++ + + G+ E Sbjct: 187 TISSQKQTAMRKLELGNEAALFDFAVRHGLLGSGE 221 >UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria RepID=A6V5P3_PSEA7 Length = 221 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 6/203 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 ++ P+++ G+ +++ P +E++ AS + R++ + I D + ++ Sbjct: 12 VLADDHPIVRMGVCDMLERD-PRFEVVGEASNPSELVSLYRQADPHIAITDYSMPGDERY 70 Query: 68 SVCEHYYS-LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 L+ + + S L A ++ ++ L+ + Sbjct: 71 GDGLKLIDYLLRNFPRTRVLIFTMVSNRLILDSLYDHGVAGVVLKSGELDELLLALDVVL 130 Query: 127 THAERISAMLTSPA--MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + A + PA +T + R L++ E +VLR G + IA LLK+S KT Sbjct: 131 QNRIYRGAHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNNVCDIARLLKRSVKT 190 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 +S QK SAMR+L ++S+ + + Sbjct: 191 VSTQKISAMRKLEVNSDQALMTF 213 >UniRef50_B4SIR4 Two component transcriptional regulator, LuxR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIR4_STRM5 Length = 208 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 13/199 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPRS 68 ++ V++ G+ + + I++S S + +T L + I DL+ +D R Sbjct: 14 LLDDHEVVRRGIALHLNRD-RRFTIVASHSLSEDLITTLHRLPVDVAIIDLSLAPDD-RG 71 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E L + I + + S + L+ ++ EP+ L + + + Sbjct: 72 SAELIPLLRETFPHIPLLAFATLSPATNLSHLINAGIGGVVGKAEPLPMLSEAIVCVHQG 131 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 R+ PA L+ +ER+VL LL G +++IA +S KT+S Q Sbjct: 132 LGRLPPDFILPADCSE---------LSRNEREVLELLLTGLTVSEIALRRHRSVKTVSTQ 182 Query: 189 KNSAMRRLAIHSNAEMYAW 207 K +A+R+L + ++AE+YA Sbjct: 183 KIAALRKLGLRNDAEIYAM 201 >UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM Length = 226 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 17/217 (7%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISS-ASAEDL---TLLQLRRSGLVIADLAGESEDP 66 ++ P++ GL ++ + I+ ASA DL ++ ++I D D Sbjct: 12 LLDDHPIVTFGLALRLQDE-ADITIVGCYASASDLIAAFSVRTMHIDVLITDYQLRPGDI 70 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + L + + V S + + + EP+E+LVK VR Sbjct: 71 DGINL-IRLLKIKMPAVKIVVSSVFHTLSTVMLAMNAGVRGFVGKEEPLEHLVKVVREVA 129 Query: 127 THAERISAMLTSPA-------MTETHDFSYRSV----ILTLSERKVLRLLGKGWGINQIA 175 A R++++L + A + + + R+ LTL ER+VLR G ++ IA Sbjct: 130 RGAHRVNSLLDAEAGAYHAASVATAKNGTSRACQAPVTLTLREREVLRCFATGMSVSDIA 189 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + ++S KTIS QK SA R+L I ++ E+YA ++ Sbjct: 190 AKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVDKLD 226 >UniRef50_Q1LG72 Two component transcriptional regulator, LuxR family n=3 Tax=Cupriavidus RepID=Q1LG72_RALME Length = 217 Score = 147 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 91/205 (44%), Gaps = 12/205 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAG-ESEDPR 67 + P++ L++ ++ P +++ + +E + L + + D + + Sbjct: 10 LADDHPLVVVALRDCLQRT-PGFQVTCECTNGSELVDALTQNPVDVAVTDFSMGHGDTSL 68 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT-----V 122 L ++ + V + +++ + +S + ++ +V+ V Sbjct: 69 DGFNLLRKLHRRHPDTRIVVVSAQTNPGVVSRAMKLGARAFVSKEDELDEIVRACIHVTV 128 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +G+ ++ I A+L S + + LTL E V+RL +G+ + +IA+ L +S Sbjct: 129 SNGHFYSPSIRAVLDS---ATAAATAAPATDLTLRELDVVRLYAQGFQLTEIANKLGRSV 185 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 TIS+QK AMR+L++ +N ++ + Sbjct: 186 STISSQKTVAMRKLSVQTNTDLIRY 210 >UniRef50_UPI00016AF7F9 capsular synthesis regulator component B n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AF7F9 Length = 225 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 6/207 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESED 65 N ++ P + G++ + + S S E + LL+ + ++I D A Sbjct: 5 NIVIADDHPAVIRGMRADL-DALQMINAVGEVSNSTELVALLERQPCDILITDYAMPGGK 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L +Y ++ + + + +L C + + VEP ++ +R Sbjct: 64 FGDGLSLLDFLRRRYPDLVIIVYTAIDNAALRAAILQCGIYAIFNKVEPPTKVIHAIRDV 123 Query: 126 ---NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 A TS LT E +V+RL G I +IA ++ Sbjct: 124 CTHLAAHHAPHARATSLGKITERSIPNALPKLTRLEAEVVRLYVSGLSIKEIAEQRNRTK 183 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWIN 209 +TIS QK SA R+L I + ++ +++ Sbjct: 184 QTISFQKESAKRKLNIKRDIDLIRYMS 210 >UniRef50_B2JLH9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JLH9_BURP8 Length = 219 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 80/215 (37%), Gaps = 7/215 (3%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEI--ISSASAEDLTLLQLRRSGLVIAD 58 M P ++ PV++ + + P + + + AE L +L + L+I D Sbjct: 1 MNPSRAFRIVIADDHPVIRHAVIHAL-NGLPGFTVDAAVKSGAELLGVLSQGKWDLIITD 59 Query: 59 LAGE-SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIEN 117 + + L Q+ ++ V + L A ++ E +E Sbjct: 60 FTMDTGKSETDGLSLIGQLCRQHPDVPVVVFTMLNNDDMLARLSRSGVAGVVDKCEGVEE 119 Query: 118 LVKTVRSGNTHAERISAMLTSPAMTETHDFSYR---SVILTLSERKVLRLLGKGWGINQI 174 H + + + + R LT E +V+RL G + I Sbjct: 120 FRSAALEVMHHRRPYFSAKIRMRLQHLNFGNGRRGGEPALTKKELEVIRLFASGASLTDI 179 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 A L +S TI+ QK++AM++L + +NA++ + Sbjct: 180 ARHLNRSLSTIATQKSAAMKKLYLQTNADLVKYAQ 214 >UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria RepID=Q4KAJ3_PSEF5 Length = 217 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 7/203 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIIS---SASAEDLTLLQLRRSGLVIADLAGESE-DP 66 + P++ A + ++++ +YE+++ + SA L R +VI D E + Sbjct: 8 LADDHPLVLAAVSDLLKKT-RQYEVVAAVTTPSALVQQLSDDPRIDVVITDYFMEGDPTF 66 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 LI + + + + S L ++L + L+ + + Sbjct: 67 GDGIRLVTYLIRHFPRVQVLVLTMMSNPMIVAALYDIGVRSVLPKRHDMSELLSALENVR 126 Query: 127 THAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 L + + S + LT E +VLR +G + QIA+ LK+S KT Sbjct: 127 QGRIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAANLKRSVKT 186 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 +SAQK SA+R+L + S+ + A+ Sbjct: 187 VSAQKISAIRKLNLDSDQALVAF 209 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 16/220 (7%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 ++ + + G++ ++ + E+ A+ + L Q R +V+ D+ Sbjct: 7 LLTDDHTLFRQGVRTLLAAE-ADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAG---M 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + + E+ +F+ E + + P + L+ +R Sbjct: 63 SSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQR 122 Query: 128 HAERISAMLTSP-------AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S L S S R LT ER++L++L +G + +IA+ + Sbjct: 123 GGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFEL 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 S KT+ A K + MR+L IH+ A++ + A + + LP Sbjct: 183 SVKTVEAHKFNLMRKLDIHNKAQLVQY---AIQKKIIRLP 219 >UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XCS1_9ENTR Length = 160 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%) Query: 60 AGESEDPRSVCEHYYS-LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + S ++Y L +Y I V + S L ++S P+ L Sbjct: 1 MMPNNTQSSDGQNYIQFLRRKYPNIALVVLTMISNPMIIQTLYDNNVNAVVSKEAPLPEL 60 Query: 119 VKTVR---SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIA 175 +K + G + + I + T+ R L+ E +VLRL +G I +IA Sbjct: 61 IKAITLAGQGKQYRQPIVDLTTTMKSRNASTLDERVKTLSPRELEVLRLFVQGKPIVEIA 120 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 LL +S+KTIS QKN+AMR+L + +N + ++ Sbjct: 121 KLLNRSDKTISLQKNAAMRKLRVENNQALISY 152 >UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=C5ALF7_BURGB Length = 215 Score = 144 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 8/201 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPRS 68 V PV+ G++ ++ + P+ ++ A L L +++ D E + Sbjct: 8 VADDHPVVLQGVQHMLLSS-PDIDLHFQIDAIKPLLVQLVESPVDVLLCDYEFEGDPEAD 66 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDV-EPIENLVKTVRS--- 124 + +F+ L + + E NL+ + + Sbjct: 67 GLHLLGRIRRIAPHTRVLFLSCHCAAYTVSAALSAGASGFIGKRREDFANLITAIHAVKS 126 Query: 125 -GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 G A+ I++ L + T+D L+ E V+RL+ G IN IA LK+S K Sbjct: 127 RGFYLADSIASRLLATTGHATNDICLSLNKLSAKEAAVVRLICNGLSINDIAKRLKRSPK 186 Query: 184 TISAQKNSAMRRLAIHSNAEM 204 TIS QKN+ M++L + ++ E+ Sbjct: 187 TISNQKNAGMKKLGVKNDIEL 207 >UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8 Length = 217 Score = 144 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 95/216 (43%), Gaps = 7/216 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGE--SED 65 ++ P + G++ + H + I+ A++ + L++ +++ DL S D Sbjct: 1 MLADDHPFVLLGIRATLIAH-GGFTIVGEATSPSSLVQLMEKASCDVLVTDLTMPDASGD 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + S + E+H V + S + + ++ +L+ E ++ L +R+ Sbjct: 60 ADDGLRLIRRIRSGWPEVHIVVLTSLTNAAILRSIMSDGVIGMLNKSESMDELAAAIRAA 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +S + + + S + L+ + +V+R+ +G I++IA L + + Sbjct: 120 GAGRSYVSRSILQTLAEASGEPLGMSPMRHLSPRQSEVIRMFVRGKSISEIARDLGRDVR 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 T+S QK AM +L + ++ ++A++ + A E L Sbjct: 180 TVSRQKRDAMAKLGVSNDPGLFAFVRAYGLASEFIL 215 >UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LGB9_RALME Length = 300 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 7/204 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ PV+ A ++ +++ +E+ A++ E + L + +V+ D Sbjct: 85 LLADDHPVITAAIRARVQSSQTGWEVCGEATSATELQQQVDLLQPDVVVTDYHMPGPTEL 144 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 SL ++ I V + + +L LL P+ ++ + Sbjct: 145 DGVRLITSLRRRHPSISVVVLTMITNPLVLRTILDVRVHGLLIKDSPLAEIMTAIGRAQR 204 Query: 128 HAERISA---MLTSPAMTETHDFSYRS--VILTLSERKVLRLLGKGWGINQIASLLKKSN 182 I +P T R + E +VLRL G + +IA+ L +S Sbjct: 205 GFTYIGKSALRALAPTELRTMLPCGRDGEQRPSAREMEVLRLYLTGRTVTEIATTLCRSV 264 Query: 183 KTISAQKNSAMRRLAIHSNAEMYA 206 KTIS QKN AM++L + ++ E++ Sbjct: 265 KTISRQKNCAMQKLGVTNDRELFE 288 >UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem domain,LuxR C-term domain n=1 Tax=Cupriavidus taiwanensis RepID=B3RBJ1_CUPTR Length = 223 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 76/200 (38%), Gaps = 4/200 (2%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDPR- 67 + P++ A L++ ++ +I + E L L + + I D D Sbjct: 18 LADDHPLVMAALRDCLQRS-ARVQISAECRNGTELLGTLARHPADIAITDFCMGHGDASL 76 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + V + +R+ + + +S +P+E +V+ Sbjct: 77 DGFNLLSRLARHHPATRVVVISARANAAIVRRAMKLGVRGYVSKEDPLEEVVRACAHAAF 136 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + A+ + T E +V+RL +G + +IA+ L +S T+S+ Sbjct: 137 GRGCFCSPAVQAALQRAALAGTPAREPTQRELEVIRLFAQGAQLTEIAAKLGRSVSTVSS 196 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 QK AMR+L + +N + + Sbjct: 197 QKTVAMRKLGVQTNTALIRY 216 >UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia RepID=C4KLT2_BURPS Length = 221 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 7/203 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAG-ESEDP 66 +V P++ + + + P + +++S S+ D L+ ++ + LV+ D ++ D Sbjct: 12 VVADDHPIVLRAVTDYV-NSLPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMHQANDD 70 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + L+ Y + + +L A L+ E I L + S Sbjct: 71 KDGLRLISHLMRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIAELGRVCVSVA 130 Query: 127 TH-AERISAMLTS--PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 ++ +S + A+ LT E +V+RL G + IA L +S Sbjct: 131 RGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSLTDIARTLNRSLG 190 Query: 184 TISAQKNSAMRRLAIHSNAEMYA 206 T+S QK SAMR+L + +N ++ Sbjct: 191 TVSTQKRSAMRKLHVDTNVDLIN 213 >UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC Length = 246 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 7/214 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESED 65 N +V P++ GL+ V + I++ A + +LL ++I D A + Sbjct: 34 NIVVADSYPMIVQGLRHVFSSV-ENMRIVAEAHTLSGMASLLSSCECDVLICDYAFGDDP 92 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEP----IENLVKT 121 ++ + + + + +L + + + +V Sbjct: 93 GPDGMRMLETIRRNHPNVKIILLAELRDGLSVQRVLKKGVSAFVVKSSDDSLSLPKIVDK 152 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 V G + + A D+ R+ +L+ E V+RLL +G + +IA L +S Sbjct: 153 VMRGKRYVDPGIAGDMLCDSGRGSDWQARTNLLSPRELDVVRLLSRGMAVGEIAVKLSRS 212 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 KTIS QK +AM++ + +N ++ + Sbjct: 213 RKTISTQKANAMKKFGVKTNVDLVDAVRDMLWRG 246 >UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia RepID=D0FMI8_ERWPY Length = 214 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 4/204 (1%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR- 67 V P + LK + + ++ I + L +L ++ +VI D + S+ Sbjct: 9 VSDDHPHIIHSLKMLFSNN-DKFTIATETGCGKDLLAVLASAQTDIVITDFSLSSKRSAI 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 +L ++ + V + S+ + + ++S +P+E+ V Sbjct: 68 DGFAKIRALSGRFPLVKIVLLTSQKNIAILRKTCDYGVKAIVSKSDPVEDTVIACHHVMN 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + S + + LT E +V+RL G+ +++IA ++ T+S Sbjct: 128 QSGYYFSSSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIARRQNRTISTVST 187 Query: 188 QKNSAMRRLAIHSNAEMYAWINSA 211 QK +AMRRL + SN E+ + + Sbjct: 188 QKYNAMRRLGVSSNVELIRYAYAQ 211 >UniRef50_UPI00016A3B5C two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5C Length = 213 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 12/204 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEI--ISSASAEDLTLLQLRRSGLVIADLAGE-SEDPR 67 + P++ +K ++ H P ++ + ++ E L L + LV+ DL Sbjct: 8 IADDHPIILHSIK-LLVEHQPLLQLRHVCNSGRELLAALARDPTHLVLTDLTMPAPGGSY 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++ + + + ++S + + + L+ +P +++ + Sbjct: 67 DGLALLRAVRAVAPHSGLIVLTAQSNAAILTKAMQLGARALVGKNDPAHEIIRACMQVHA 126 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI----LTLSERKVLRLLGKGWGINQIASLLKKSNK 183 A SPAM + + + I LT E V+RL G +++IA ++S Sbjct: 127 GAT----HHVSPAMRKRMEDGRSTHICDSNLTQKELDVVRLTANGLSLSEIALQYRRSVS 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 TIS+QK++AMR+L +HS A++ + Sbjct: 183 TISSQKSTAMRKLGVHSTADLIRY 206 >UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME Length = 215 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 88/208 (42%), Gaps = 5/208 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEII-SSASAEDLTLLQLRRSGLVIADLAGESEDPRS 68 +V P++ L+ + E++ +S+ E L L G+VI D + + Sbjct: 8 LVCDDHPIIVIALRSELARIGQFSEVVTASSVNEILNALNDPEVGIVITDFSL--NEAGD 65 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + + ++ + + +++ + +S ++ + R Sbjct: 66 GLQLIGRIKRMRPDVAVIVFSMNASPPAVRDMIAAGASAFVSKTCGTRDVAEACRVVLAG 125 Query: 129 AERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + ++ + + + + ++ + L+ ER+VLRLL +G + +IA+ +S KTIS Sbjct: 126 RKFVAPASLAHLLDQDDGGTPQAALQRLSPREREVLRLLAQGLSLREIAARFNRSRKTIS 185 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQGA 214 QK +AM +L + + E+ ++ SA Sbjct: 186 VQKCAAMAKLGLTHDMELGRYLASADSD 213 >UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms RepID=Q0K0R3_RALEH Length = 216 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 5/205 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEI--ISSASAEDLTLLQLRRSGLVIADLAGESED-P 66 ++ PV+Q +K + P I I S+ E LQ ++ L++ D E Sbjct: 9 VIADDHPVIQLAVKATLSEI-PNVRISAICSSGKELFAALQTQQPDLIVTDFTMERSHVN 67 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + L V + + A ++ E L + Sbjct: 68 DDGLRLVHRLRQSRPHTPIVVFTMLTNGGLLTRIKEMGVAAIVGKNEEPGILRQICVDAI 127 Query: 127 TH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 T +R+S + + + + + L+ E +V+R+ G + +IA L +S TI Sbjct: 128 TGTGQRLSPGIAARMSSAGALVNGTASPLSPREIEVVRMFATGSTLTEIAGYLHRSLATI 187 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINS 210 + QK SAMR+L I +NA++ + Sbjct: 188 ATQKRSAMRKLNITTNADLVTYARD 212 >UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella RepID=A9IRH9_BORPD Length = 258 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 4/201 (1%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPRS 68 ++ PV+ G+ +R+ P+++I+ + S + L+ + + + D P Sbjct: 51 ILDDHPVITLGVAAYLRS-QPDFDIVHAETTSEALVRSLKHQPCDVAVVDFYLPR-QPWD 108 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + L Q+ + + + + L + LV+ +R+ ++ Sbjct: 109 GMDFIRRLRRQHPHMAIITFSAGAPAETEYAAFRAGAHGYLPKSASMPVLVEVIRAAHSR 168 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 + T + LT +E +VLR + +G + Q+A+ L +S KTIS Sbjct: 169 GRPGDFISYKNGTLHTAAPRHPDTRLTTAEIEVLRQIAQGLSVTQLAARLLRSKKTISTH 228 Query: 189 KNSAMRRLAIHSNAEMYAWIN 209 K AM++L + + + ++N Sbjct: 229 KRRAMKKLGLADDLALALYLN 249 >UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=Burkholderia RepID=A9APD3_BURM1 Length = 234 Score = 139 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 6/219 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDPR 67 + P+ G++ V+ E++++ +AE + +++ D + + Sbjct: 9 VFAYDWPLALVGMEHVVAAGCA-IELVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRI 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L E+ V +V +L +++S + + ++V V S + Sbjct: 68 EGLALLERLTRVRPEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYS 127 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S ++ + L+ E +V+RL G I IA L K +T+SA Sbjct: 128 GGRYLSPLVRRALDASGSE--PAPAKLSSREVEVIRLYLSGIPIKAIAQRLNKGKQTVSA 185 Query: 188 QKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDA 226 QK SAM++L H++ E+ + + G L + A Sbjct: 186 QKISAMKKLGAHNDVELIRYA-AGLGLGGATLDATVPRA 223 >UniRef50_D2TRD6 LuxR-family transcriptional regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TRD6_CITRO Length = 221 Score = 139 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%) Query: 21 GLKEVMRTHF-PEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQ 79 GL +M+T P+ II S D ++ +RR+ ++I S P C + + Sbjct: 21 GLVTMMKTILGPDKNIIVSG---DYSISGVRRADIIIM-----SSTPALPCLCLPNF--R 70 Query: 80 YREIHWVFMVSRSWYSQ--AVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT 137 +R+ H + +V +S + C + LL + + L++T A + + Sbjct: 71 FRQPHSLVIVFNDRHSNFRSHTCAACNSGVLLLNHKKPIGLIRTRLEQTIKAVSMEDISC 130 Query: 138 SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA 197 +P S R L+ + +V++ + +G+ + +IA L+ S KTI A K M+R+ Sbjct: 131 TPG----DYLSCRHCRLSKKQLQVIQYMRQGYNVQRIAKLMNVSAKTIHAHKYRIMQRIG 186 Query: 198 IHSNAEMYAWINSAQGA 214 N +Y +INS Sbjct: 187 TKGNVRLYNFINSIGQD 203 >UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC Length = 223 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 5/203 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESED 65 N +V PV+ G+ ++ + ++ AS +E L LLQ + ++I D + + Sbjct: 15 NVVVADDHPVVSTGVAAILTAEM-DINVVGVASTISELLLLLQQQPCDVLICDYSFSGDQ 73 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM-CPTATLLSDVE-PIENLVKTVR 123 + L + + V + + + V +M A L L VR Sbjct: 74 QPDGVALFKRLRRNHPHVAIVVLTAHQDIALLVSRVMNTGVAGFLRKSSQDFARLAAIVR 133 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + + + L+ E ++ R+LG+G + +IA +S K Sbjct: 134 RVHAGQTFVDPAVAVDLLEVGQAAQTSIESLSERELEIFRMLGRGMSVTEIAMHTNRSIK 193 Query: 184 TISAQKNSAMRRLAIHSNAEMYA 206 TIS QK AM +L S A++Y Sbjct: 194 TISHQKMRAMHKLGARSEADLYR 216 >UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LLE4_RALME Length = 213 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 10/205 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS-AEDLTLLQLRRS-GLVIADLAGESEDPR 67 +V+ ++ G+ V++ + + I+ + + + D ++ LVI D A E D Sbjct: 6 MVLDDHEIVHQGIVRVLQQN-SAFAILGTFTRSRDFVQALRNKAPDLVIIDYALEPSD-A 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + QY I + + + + I ++ + Sbjct: 64 DGIGVIRMIRRQYPGIKILVLSAHDSPVTIALAMKAGADGYCIKNGSIADITAAIAKILR 123 Query: 128 HAERISAMLTSPAM--TETHDFSYRS----VILTLSERKVLRLLGKGWGINQIASLLKKS 181 A I A + S ++ E + + S LT ER+VLR G +N+IA+ +S Sbjct: 124 GASHIPAQVASLSVFGKEQGEGAPGSGGLTAALTEKEREVLRCFLDGMTVNEIAAKFSRS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYA 206 KT+S K SA+R+L I S+ E++ Sbjct: 184 KKTVSGHKQSALRKLGIRSDNELFK 208 >UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL Length = 215 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 6/202 (2%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDPR- 67 + P + A + V++ P++ ++ + L L + LV+ D + ED Sbjct: 8 IADDHPFVLASMTAVLQGV-PQFAVVHQCANGKDLLDALSKVETDLVVTDFSMTREDRSV 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L ++ ++ V + + L L+S + I L + Sbjct: 67 DGFGLLAELRRRHPDVKIVLLTALVNAGIFTRALSVGVGALVSKTDSISELARACARVKI 126 Query: 128 -HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S + S + LT E +V+RLL G + QIAS L +S TI Sbjct: 127 SRSPYLSPAVQSIIHGASMDHPNTSKARLTPKELEVVRLLVAGRSLAQIASQLGRSPSTI 186 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S QK +A R++ S ++ + Sbjct: 187 STQKYNASRKIGATSYTQLIRY 208 >UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE77A Length = 194 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%) Query: 35 IISSASAE--DLTLLQLRRSGLVIADLAGES--EDPRSVCEHYYSLISQYREIHWVFMVS 90 ++ +A + + +L R +VI+D S E + ++ + V + Sbjct: 1 MVGTARSPGDLVDMLTRRECDVVISDYTMSSGCEKYSDGIAMLSLIRRRHPGVGLVVFTA 60 Query: 91 RSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHD--FS 148 LL + + S + + + VR+ + +S ++ S D S Sbjct: 61 IDNPGVIRSLLSKHISCIFSKRDHADEMPAAVRAAKSEEAYLSPVIASIVRESKTDAPTS 120 Query: 149 YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 R + LT E +V+RL G IN+IA+ L++S +TIS+QKN+AMR+++I N ++ + Sbjct: 121 NRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLIKY 179 >UniRef50_A9AIC6 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=A9AIC6_BURM1 Length = 229 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 5/201 (2%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESED-PR 67 + PV+ + L ++ + P + + + + L + +VI D + D P Sbjct: 23 IADDHPVVVSLLVQLFQAD-PSFHVEHCCNEGSALIESLARVPTDIVIVDYSMSRGDRPV 81 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + V + + + A ++S + + L++ R Sbjct: 82 DGFALLRKLREVAPKAGRVLFTMQRNPTVFAAAMRLGVAAIVSKEDEVAELLRACRYIQD 141 Query: 128 HAE-RISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S + + + LT E V+RL G + IA L +S T+S Sbjct: 142 GGACYLSPTVRTIVDQAGTVLRDNAPPLTQKEIDVVRLFVSGHSLADIAKQLGRSVSTVS 201 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 QK +AMR+L +N + + Sbjct: 202 TQKYTAMRKLRADTNVHLIRY 222 >UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter RepID=C9XUX9_CROTZ Length = 200 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 10/191 (5%) Query: 20 AGLKEVMRTHFPE---YEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSL 76 G++ +++ + EI S + L R VI L G E R + + Sbjct: 4 EGVRSLLQVNNSTSCRLEIFSDH-HAFIQALTYRHFSTVIFSLEGTREHRRDCLQFVSEM 62 Query: 77 ISQYREIHWVFMVSRSWYSQAV-ELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAM 135 + + + MV+ ++ + +L P ++ E + + S + + R+S Sbjct: 63 AKAWPRMKRIVMVNNVNEAKLISQLSPTPLQGIIDKSETLSRFTDELMSAMSDSARVSE- 121 Query: 136 LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRR 195 SP R +L+ +ER +LR L G+ ++QIA L+++ KTI A K +AM + Sbjct: 122 --SPHKIWYASQGSR--LLSPTERIILRYLTDGYSVSQIACRLERNIKTIRAHKFNAMLK 177 Query: 196 LAIHSNAEMYA 206 L +H++A + Sbjct: 178 LGVHTDAGLLN 188 >UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5 Tax=Burkholderiaceae RepID=B4ELF5_BURCJ Length = 238 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 24/219 (10%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ V+Q G+ + E+ +S S + + L+ + +V+ D + Sbjct: 11 VILDDHAVVQHGIASYLTEKI-GIEVAASFAKSRDLIRWLEAHHADVVLLDYTLGPGE-I 68 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + +++ + + M S + + E + L +R Sbjct: 69 DGLNLVKLVNTRFPDCRILMMSSSDTPATVSMTMRAGALGFFGKSEDLGELAHAIRVVAN 128 Query: 128 HAERISAMLTSPAMTETHDFSY--------------------RSVILTLSERKVLRLLGK 167 ISA L + + + L+ E +VLR Sbjct: 129 GRPYISAELAARMESSATPDPRMADTKAAGGDGTLTPESGPSADLRLSPREHEVLRCFLA 188 Query: 168 GWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 G ++ IAS +S KTISAQK SA R+L I S+AE++A Sbjct: 189 GMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAELFA 227 >UniRef50_B2SXK9 Two component transcriptional regulator, LuxR family n=6 Tax=cellular organisms RepID=B2SXK9_BURPP Length = 230 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 81/207 (39%), Gaps = 7/207 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESED-- 65 I+ P + G++ + ++ A+ + LR +++ DL+ Sbjct: 19 ILADDHPFVILGVRAALE-MQAGITVVDQATDPVSLIECLRSTPCDVLVTDLSMPDHSFA 77 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + S + ++ V M + + + ++ +++ E ++ L + V + Sbjct: 78 VDDGLNLVRRIRSCWPQLRIVVMTTLTNPAILRAIVSDGAVSMVGKAESMDELRQAVLAA 137 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSV--ILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + R LT + +V+RLL G I+ IA+ L + Sbjct: 138 RDGHAYLGRSIIEALAHPQDCECERPPAPRLTGKQAEVVRLLVSGQSISDIAAALGCDRR 197 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T++ QK AM +L + ++ +++++ + Sbjct: 198 TVTRQKREAMAKLGVTNDPGLFSYVRA 224 >UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH0_PSEF5 Length = 251 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 90/206 (43%), Gaps = 12/206 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPRS 68 V+ +++ ++ +++ +++++ ++S E ++ L+ L++ D + D Sbjct: 13 VLDDHALIRMAMQLQLQSV-ADFQLVGLYASSGELISALRDTELDLLVLDYQLQECD-LD 70 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 L ++Y + + + +++ L + +++L+ +R+ + Sbjct: 71 GLRLIRLLRNKYPHLLILVSSATETPFFVKQIIDIGANGFLGKSQSLDDLIPAIRTVASK 130 Query: 129 AERISAML--------TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S +L PA L+ E +VLR G I+QIAS + Sbjct: 131 RLYLSPLLAFAVQHPPIGPAAEPGSPPLTSLETLSPKENEVLRCFLDGLRISQIASKFSR 190 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYA 206 S KTIS QK +A R+L I ++AE++ Sbjct: 191 SIKTISGQKQAAFRKLGIRTDAELFK 216 >UniRef50_C5A924 Two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A924_BURGB Length = 218 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 13/206 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPRS 68 + P++ + + +++ P ++ + AE L L+ ++I DL+ + D Sbjct: 15 LADDHPLVASAMTKLLGET-PSITVVHVSHSGAELLQQLRADPCEMIITDLSMGTSDHAD 73 Query: 69 --VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + +L + + + + + A LL ++ + +E L+ V Sbjct: 74 QDGLKLVSALRKNWPSARVIVYTALNHPALAQRLLYLGAHAVVCKEDSLEELLAAVDQVA 133 Query: 127 -THAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S L A + LT E +VLR +G G + I+ + + T+ Sbjct: 134 VQGSTYLSKQLRGTAPA-------PASALTPRELEVLRHIGCGLSVVDISRRMFVTVSTV 186 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSA 211 S K +AM +L I S E+ +I++A Sbjct: 187 STHKRNAMDKLNIRSTVELIQYIHAA 212 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 12/208 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPRS 68 + P++ AG++ ++ PE E++ A++ L + + + + D++ + Sbjct: 9 LADDHPIVLAGIRTLLNAD-PEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN--- 64 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E + + + + LL L E+L++ VR+ Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 129 AERISAMLTSPAMT------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + + S AM + D + L+ E VLRL+ +G+ +IA S Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINS 210 K+I K A +L + + AE+ + + Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAA 212 >UniRef50_B5WJ97 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. H160 RepID=B5WJ97_9BURK Length = 195 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 4/180 (2%) Query: 33 YEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVS 90 ++ A S + LL+ + ++++D + R L Y +F+ + Sbjct: 11 LSVVGEAENSTAIVELLREKEVDVLLSDFEIPGKMYRDGNSLMTLLRRTYPSTKVIFVTT 70 Query: 91 RSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTS-PAMTETHDFSY 149 + ++ +L + E ++ VRS + I+A + + + +F Sbjct: 71 LTNPLLLRAVIKSRAHGVLLKNDSPEEVISAVRSVSRGQFYIAASVRRITGINDCEEFEA 130 Query: 150 RSVI-LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 R V L+ E +VLRL G I++IA+L +S +T+S Q+ M++L ++ E++ ++ Sbjct: 131 RKVGHLSAREGEVLRLYVSGMSISEIAALSHRSLQTVSTQRKQGMKKLGFTNDRELFEYM 190 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 8/206 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDPR 67 ++ +M+ GLK++ E+++ A L QLR L++ D++ Sbjct: 8 MIADDHVIMREGLKQIFALD-ENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSMPGICGE 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E +++QY + + + S A +L ++ + E L+ +R Sbjct: 67 ---ELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRRVAQ 123 Query: 128 HAERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 A I + + R +LT E +++ +L +G G+N IA +L SNKT+ Sbjct: 124 GARYIDHSIAEQIVFADCQTRGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAISNKTV 183 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSA 211 S K+ M ++ +NA++ + S Sbjct: 184 STHKSRLMEKMQFTTNADIVKYALSQ 209 >UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1 Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO Length = 222 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 85/201 (42%), Gaps = 13/201 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASA---EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P++ GL++ + + E++ S S + + +++ D + ++ + Sbjct: 19 LVDDHPIILLGLEQFLSQQM-DIELVFSVSTIQEYLIRVKDSAPCDVLVIDFSMP-DEAK 76 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 R + S+ + ++ + ++ + L++++R+ Sbjct: 77 DGFAWLRVAQETARNAKIILFTSQLYLTKICQGKNVGVCEIIYKGDSQLALLESIRTAAD 136 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 R+ + S + LT E +VL + +G +++IAS ++S KTIS Sbjct: 137 IEGRVKPEMES--------CDKEANRLTKKEWEVLLWIAEGMSVSEIASKKQRSIKTIST 188 Query: 188 QKNSAMRRLAIHSNAEMYAWI 208 QK S M++L I ++ + +++ Sbjct: 189 QKRSVMKKLGIKNDFGLMSYL 209 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 5/200 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +++ GL+ ++ E++ S + L R +++ D+ Sbjct: 7 VIVDDHALVRQGLRLILHGV-AGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP--QGL 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L ++ + + ++L + ++ + +V ++ G Sbjct: 64 DGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQP 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S A ET S + L+ E +VL LL +G+ ++A L S KT+ Sbjct: 124 GHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVET 183 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + MRR+ +HS A + + Sbjct: 184 HRQHIMRRIGLHSRAALVRY 203 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 77/201 (38%), Gaps = 8/201 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPRS 68 + PV++ GLK+++ ++ + AS+ + Q R + + D + Sbjct: 7 IADDHPVVRQGLKQLLGAE-ADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPG---KG 62 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + L ++ + + + A+ +L A L+ E+LV +R Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 129 AERISAMLTSPAMTETHD--FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +SA L L+ E +++ LL G + +IA L S TIS Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + + +L + SNAE+ + Sbjct: 183 TYRKRILEKLDLKSNAELMRY 203 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 80/205 (39%), Gaps = 7/205 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ V++ GL+ ++ ++E++ A E L++ +++ DL+ R Sbjct: 5 IIADDHTVVRNGLRHILERT-SDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPG---R 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E L + + + + + + V A L+ LV+ +R Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 128 HAERISAMLT-SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S + A+ L+ E +V R + G + QIA+ L S KT+S Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSA 211 K M +L + S+A + + A Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIEA 205 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 14/209 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ V++ G ++ + + E++++A E + R ++I DL+ + Sbjct: 4 VIADDHAVVRTGFSMIL-NYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE-- 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + + + + + +L + P E L+ VR+ Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 128 HAERISAMLTSPAMTETHDFSY---------RSVILTLSERKVLRLLGKGWGINQIASLL 178 + LT+ + E + S IL+ E ++L L+ KG+G IA L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ A K M +L + S E+ + Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEY 209 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 83/221 (37%), Gaps = 15/221 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ +++ GL+ ++ + E++ A L L + R +V+ DL R Sbjct: 6 MLVDDHALVREGLRALLERE-GDIEVVGETGSAAGVLALAEESRPEVVVMDLQL--GAGR 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E L+ + EI V + L + IE L +R Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 128 HAERISAMLTSP---AMTETHDFSYRSVI----LTLSERKVLRLLGKGWGINQIASLLKK 180 + + + E F+ S LT E +VLRL +G +IA L Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 S KT+ A + + M++L +H ++ + A L L S Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKY---AIKNGILKLDS 220 >UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA Length = 265 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 24/217 (11%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS----------AEDLTLLQLRRSGLVIADL 59 I++ V+ +G+ ++ + ++ + S L R +++ D Sbjct: 35 IMLDDHEVVLSGITYQLKRE-RDIAVLGTFSRSRQLFDYLAQHGPALAHTRP--VLLIDY 91 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 A +D + L Q+ + + S LM + +E LV Sbjct: 92 ALGPQDTDGIAL-IRRLCVQFPVCPILVVSGHLQPSIVRLALMAGARGYIGKDCTLEELV 150 Query: 120 KTVRSGNTHAERI------SAMLTSPAMTETHD----FSYRSVILTLSERKVLRLLGKGW 169 +R + + + L PA E + + +L+ E +VLRL +G+ Sbjct: 151 DAIRRVASGEKYVHPSLAERDDLVPPAAIEMRRGDTGRATLASLLSPRELEVLRLTLQGF 210 Query: 170 GINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 + QIA L +SNKTIS QK SA R+L I + E++ Sbjct: 211 EVGQIAEKLSRSNKTISTQKRSAYRKLGISGDRELFK 247 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 6/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +++ ++++GL+ ++ P ++ A + E L LL+ ++ + I D++ Sbjct: 5 VLVEDHLLVRSGLRHLLEARGP-VRVVGEAGSCREALELLEKVQADVAILDVSLPDGTGI 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++C+ L ++ E+ + + L +S + L+ V + Sbjct: 64 ALCQ---RLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ L E S L+ E +VLRLL +G ++A L S KT++ Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVAT 180 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + M +L + S +E+ + Sbjct: 181 YRERGMEKLGLASRSELLRY 200 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 11/213 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS------GLVIADLAGES 63 ++I +++ G++ + T P+ ++ A + L L R+ LVI D+ Sbjct: 22 LLIDDHALVRDGMRMHL-TLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMRG 80 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 +L QY EI + + A + + + P + L+ + Sbjct: 81 ---MGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIE 137 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + SA + M E + LT ER +L +G+G +IA+ L S + Sbjct: 138 AVLAGRVFYSARIAR-GMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVR 196 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 T+ + + R+L I A + + G E Sbjct: 197 TVETHRLNLKRKLGIEGRAGLVKYAVEQAGETE 229 >UniRef50_Q7NVE2 Capsula synthesis response regulator transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVE2_CHRVO Length = 231 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 84/218 (38%), Gaps = 16/218 (7%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR-----RSGLVIADLAGESE 64 I++ ++ GL + + P+ + S S+ + L + + + D A + Sbjct: 15 ILLDDHLMVLHGLGSHLE-NVPDISLTGSFSSSGQLMRTLAGAAAPLADVAVIDYALRPD 73 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 D ++ ++ + + M + + + + + + L+ +R Sbjct: 74 DVDG-LNLIRAMRIRFPWLRILVMSAYYTPATVALAMRGGAHGFIGKEQGMSELILAIRR 132 Query: 125 GNTHAERISAMLTSPAMTETHDFSYR---------SVILTLSERKVLRLLGKGWGINQIA 175 +S + ++ + S L+ ER+VLR G +++IA Sbjct: 133 LAAGQTYLSEDMREAMPQQSGEASIPSDALPNLLDHPDLSPREREVLRCCLLGLSVSEIA 192 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 +S KTIS QK SA+++L + S+ E++ +G Sbjct: 193 VKFSRSIKTISNQKQSALKKLGLRSDNELFLQQQRLEG 230 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDPR 67 ++ +++ GLK ++ + + + AS L++LR+ ++ DL R Sbjct: 5 LIADDHDILRIGLKHILSDT-GDIVVTAEASNGIEALVELRKGTFDALVLDLTMPG---R 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + ++ ++ + + AV L + L L +R Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 128 HAERIS---AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 I+ A + + D LT E ++ ++ +G G+ +I L S KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 +S K S + ++ + ++AE+ + Sbjct: 181 VSTHKASILAKMNLRNSAELVRY 203 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 7/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ +++ GLK+++ T + + + A+ + +LR L++ D+ Sbjct: 5 LIADDHAIVRGGLKQIIATT-NDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGISGV 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + + + A L L+ + L+ +R Sbjct: 64 D---LIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 128 HAERISAMLTSPAMTETHDFS-YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 I L + ETH +L+ E +VL++L G IN+IA + S KTIS Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 K M++L + +NAE+ + Sbjct: 181 THKMRLMQKLGLANNAEVIRY 201 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ V++ GL+ ++ + P++ ++ A L L++ + +++ DL+ Sbjct: 7 ILADDHTVLRTGLR-LLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPR---V 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E L S+ +EI + + E + + L +R+ + Sbjct: 63 SGLECIKELKSRGQEIKILVLTMHGRE-YVKEAMAAGALGYIEKQALDSELFVAIRTVAS 121 Query: 128 HAERISAM--------LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +S L SP +LT ER+VL+LL +G + QIA LL Sbjct: 122 GRRYMSPDNAEVLLDQLLSPTPQAASPD--PYAVLTAREREVLKLLVRGHTLTQIAGLLH 179 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KTI K M +L + +++ + Sbjct: 180 LSVKTIDTHKTHVMEKLNLTHKSQLVDY 207 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 84/203 (41%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 I+ + + GL++++ ++ ++ A+ D L++LR +V+ DL+ Sbjct: 5 IIADDHTIFREGLRQILAEA-NDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGISGI 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++ + +R + + + VE L ++ + L+ +R + Sbjct: 64 TLVRAAREIAGAHR---IIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 128 HAERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +SA + A+ S LT ER+V +L G I++IA L S KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 +S K + + ++ + A++ + Sbjct: 181 VSTHKTNLLAKMDAETTADLVRY 203 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 13/207 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +V V++ G++ ++ +H P + + AS E + L Q R +V+ D+ + Sbjct: 1 MVADDHEVVRRGVRALVESH-PGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELN-- 57 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + + + + + + L + + +LV + + + Sbjct: 58 -GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSK 116 Query: 128 HAERISAMLT----SPAMTETHDFSYRSVI---LTLSERKVLRLLGKGWGINQIASLLKK 180 HA + + + A E + R LT ER+VLRLL +G ++A L Sbjct: 117 HAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSI 176 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ + + MR+L S ++ + Sbjct: 177 SAKTVETHRANVMRKLGASSIVDLVHY 203 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 ++ P++++G++ V+ E+ + A + L + + +VI D + Sbjct: 9 VIADDHPIVRSGIRAVLEQR-AEWWVCGEADNGETAVRLAREHAAKIVILDYSLP---VL 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + E + S E L L +E LV V + Sbjct: 65 NGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIR 124 Query: 128 HAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 S ++ + + D S LT ER+V+R + +G +IA+ L S KT+ Sbjct: 125 GQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTV 184 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 + + +AMR+L + + ++ + Sbjct: 185 DSHRTTAMRKLGLRNAVDLVRY 206 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 +++ V+++GL+ ++ + E+I+ A + + +++ D++ Sbjct: 8 MLVDDHEVVRSGLRRLLEQN-DGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPG---M 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E +I++Y + + + A + L ++ ++LV+ VR Sbjct: 64 GGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQ 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S + +T S +L+ E +V RLL G G+ +I+++LK S KT++ Sbjct: 124 GKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVA 183 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 + ++L I S E+ Sbjct: 184 NYQTLLKQKLGITSPIELVR 203 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 10/200 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPRS 68 +I PV++ G + P+ ++ A L + +V+ DL R Sbjct: 26 LIDDHPVVREGFARALSDE-PDMVVVGQAGTAADALRETASCKPDVVLVDLNIPD---RD 81 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E +L +Q + + + + E L L +E +++ +R T Sbjct: 82 GIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATG 141 Query: 129 AERISAMLTSPAMTETHDFSYRSV----ILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S+ + + + LT ER+VLRLL G + A+ L S KT Sbjct: 142 GAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKT 201 Query: 185 ISAQKNSAMRRLAIHSNAEM 204 + + +L S E+ Sbjct: 202 VETHRVRIYAKLGCKSAVEL 221 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 87/209 (41%), Gaps = 11/209 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGES 63 C N ++ +++ GL+ ++ TH +++ A +TL + ++I D++ Sbjct: 2 CVNVLLADDHKIVRDGLRTLLETH-GSMNVVAEAENGQKTITLARELHPEIIIMDISMPD 60 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + + S I + + + + +L + L E LV ++ Sbjct: 61 MNGIDATR---KITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQ 117 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVI-----LTLSERKVLRLLGKGWGINQIASLL 178 + ++ +S + + + + + LT ER++L+LL +G QIA+ L Sbjct: 118 TVLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANL 177 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ + + ++L + S AE+ + Sbjct: 178 HVSVKTVETHRRNITQKLGVGSVAELIKY 206 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 87/207 (42%), Gaps = 13/207 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +V +++ GL ++ + P+ E++ A E + +++ +V+ D++ + Sbjct: 7 LVAEDHTIVRKGLCSLLYSE-PDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELNGM 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L +Y ++ + + S E L + L +L+K + + + Sbjct: 66 DATR---QLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHA 122 Query: 128 H----AERISAMLTSPAMTETHDFSYRSV---ILTLSERKVLRLLGKGWGINQIASLLKK 180 + IS + + + S +L+ ER+VL+L+ +G +IA L Sbjct: 123 GDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYI 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ A +N ++L ++ AE+ + Sbjct: 183 SPKTVEAHRNHIQKKLGLNGTAELTKY 209 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 84/201 (41%), Gaps = 8/201 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPRS 68 ++ +++AGL++ + H + ++ AS E + L+++ +++ DL+ + Sbjct: 35 IVDDHAIVRAGLRQFLSEHV-DLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQSGLD 93 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 L ++ ++ + + A+ L+ + L+ + +V+ +R+ Sbjct: 94 ALAM---LRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIALG 150 Query: 129 AERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 ++ + + D + L+ E +V L KG IA L S KT+S Sbjct: 151 RRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTVS 210 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + M ++ + SN+++ + Sbjct: 211 TYRTRLMEKMGLSSNSDLTYY 231 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 11/204 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ ++ G + M P+ E+ ++A +AE L LL+ R LV+ DL R Sbjct: 13 LLVDDHRMVLEGYR-FMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTL---GGR 68 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + +++ + E + A L + + VR+ Sbjct: 69 SGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLA 128 Query: 128 HAERISAMLTSPAMTETHDFSYRS-----VILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S+ L + + R L+ E +V RL G+G +IA+ L S Sbjct: 129 GQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSP 188 Query: 183 KTISAQKNSAMRRLAIHSNAEMYA 206 KT+S ++ +L ++AEM Sbjct: 189 KTVSVHRDHIKEKLGFSTSAEMIR 212 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 7/205 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 +V +++ GLK + + E+++ A+ L ++ +++ D++ Sbjct: 5 LVADDHFLVREGLKMTIAA-MQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGLSGV 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + S++ + + + A ++L + ++ + E L+ +R + Sbjct: 64 D---LVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 128 HAERISAMLTSPAMTE-THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 I L + + + LT E ++LR+L G + QIA+ L S KT+S Sbjct: 121 GHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVS 180 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSA 211 K AM++L +N E+ + A Sbjct: 181 THKIRAMQKLHCQNNVELLKYAPEA 205 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 14/207 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVC 70 ++ +++ GLK ++ F A + +L LVI D++ S Sbjct: 10 LVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNP-DLVITDISMPG---LSGI 65 Query: 71 EHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAE 130 + +L QY I + + +LL + + +L++ + + + Sbjct: 66 DLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGET 125 Query: 131 RISAMLTSPAMT----------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S +T+ ++ E D +L+ ER++L+L+ +G I +L Sbjct: 126 YLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILGI 185 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S T+ + + M++L +H A++ + Sbjct: 186 SPATVKVHRANIMKKLNLHKVADLVMY 212 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +++ P + G++ + E +I A++ E + L LV++D+ + Sbjct: 8 LLVDDHPFVLDGVRLRLEAT-GEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDAN-- 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + Q+ + + + A + P LV +R+ Sbjct: 65 -GLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAA 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++A L + T+ S R LT E VL+LL +G +IA L S +T+ Sbjct: 124 GGTYLNAELQAFLHTDEPPPSSR-RALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVET 182 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + R+L + AE+ + Sbjct: 183 HRLHLRRKLRVGGRAELVKY 202 >UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK Length = 210 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 84/207 (40%), Gaps = 5/207 (2%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDP 66 +VI +++ G + V R P II S S + + ++L ++ D ++D Sbjct: 6 AMVIDDHYLVRQGFEAVARRI-PGLSIIGSYERSRDLIAAIELCPPQVLYLDFVLHTDDV 64 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + + ++ + + + + + + + + +L + Sbjct: 65 GGLTL-IRLIKRRFPIVKIIVVSAHANAGIVSLSIRAGASGFCFKTSSVSDLTEATSRVL 123 Query: 127 THAERISAMLTSPAM-TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 I + A+ + +D ILT ER+V+ L+ G I+ I+ L + KTI Sbjct: 124 GGKVYIPKFVDECAVNRDLNDRPDAFEILTPREREVVNLILIGMSISDISKKLVRDRKTI 183 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S K +A R+L + S+AE+++ + Sbjct: 184 SGHKQTAYRKLGVSSDAELFSIKHLLM 210 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 119 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL---RRSGLVIADLAGESEDP 66 +++ +++ G+ ++ P+ E+ + A D L L + +V+ D++ ++ Sbjct: 9 MLVDDHAMLRHGM-AMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSLKT--- 64 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 S E S+ + + + + A L + EP E LV + Sbjct: 65 LSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAIHEVL 124 Query: 127 THAERIS----AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S A L + + LT SE +VL L+G G +IA LL +S Sbjct: 125 KGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKLLSRSI 184 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KTI + + +L + A++ + Sbjct: 185 KTIETHRFNIRTKLNLKDGADLIRY 209 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 119 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 90/206 (43%), Gaps = 12/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GLK ++ ++E++ AS E + L++ + G+++ DL Sbjct: 5 VLADDHQIVRHGLKALLEAE-ADFEVVGEASDGIEAVNLVESLQPGVLVTDLMM---GGM 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E Y ++ + + V + + E L + E LV++VR Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSV------ILTLSERKVLRLLGKGWGINQIASLLKKS 181 +S+ L+ A+ + S + LT+ ER+VL L+ +G +IA L S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 +T+ + + MR+L + + ++ + Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRY 206 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 119 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 83/200 (41%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ V+++GL ++ + + ++ A + + +++ D++ Sbjct: 8 MLVDDHAVVRSGLCRLLEQN-TDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPG---M 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E +++++ + + A++ L ++ E+LVK VR + Sbjct: 64 GGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKS 123 Query: 128 HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S+ + A+ + LT E +V RLL +G ++ IAS L KT++ Sbjct: 124 GKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVA 183 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 + S ++L IHS ++ Sbjct: 184 NYQTSLKQKLGIHSPVDLVR 203 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 12/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ PV++ GL + + EI+ A T+ ++R +V+ DL + Sbjct: 22 LLADDHPVVRKGLGSCL-NNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPT---M 77 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + ++ + + + + ++++ + P+ LV+ + S + Sbjct: 78 SGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHG 137 Query: 128 HAER----ISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 IS ++ + E + S S LT E +VL ++ +G ++AS + Sbjct: 138 GGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVG 197 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 +T+ + M +L IH+ A + + Sbjct: 198 VRTVETHRERVMNKLDIHNVAGLTKY 223 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 86/203 (42%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + + L+ ++ PE E+++ A++ E L + + LV D+A Sbjct: 6 LLADDHQMFRHALRALLARD-PELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPG---M 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L++++ + + + + + +LL ++ E + L++ +R+ Sbjct: 62 DGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCE 121 Query: 128 HAERISAMLTSPAMTETHD---FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + + D + LT ER+VL+L+ +G QI L + T Sbjct: 122 GRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + + + MR+L +H+ AE+ + Sbjct: 182 VEVHRRNLMRKLDLHNVAELTRY 204 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 86/214 (40%), Gaps = 12/214 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLR--RSGLVIADLAGESED 65 I+ ++ GL+ +++ + E+I A LL+L + + D+ Sbjct: 10 IIADDHHMVLEGLEALIK-VTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDMP--- 65 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + ++Y I + + + S E++ + + LV +R+ Sbjct: 66 VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIRTI 125 Query: 126 NTHAERISAMLTSPAMTETHDFS----YRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 E S +T + + V LT E++VL L+GKG +I+ L + Sbjct: 126 YAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLFIA 185 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 + T+ + + + +L + ++ E+ ++ + ++ Sbjct: 186 DTTVETHRRNLIDKLEVKNSKELILYVAKNKESK 219 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDPRS 68 ++ + G++ ++ E+ +S E L LL+ R+ +V+ D+ Sbjct: 6 LVDDHRLFLEGIRSILDREI-GLEVHASVGQGVELLNLLKTTRADVVLTDIRMPG---MD 61 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + + + + +LL L E LV+ + + Sbjct: 62 GLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVARG 121 Query: 129 AERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S P R SV LT ER+VL L+ +G QIA LK S TI Sbjct: 122 DYYLSRKF-RPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFTID 180 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 + + +++ I SN + Sbjct: 181 THRKNIHKKMGIRSNIGLLK 200 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 ++ V++AGLK ++ P+ E+I AS + + + LV+ DL + Sbjct: 8 VLADDHAVLRAGLKVLL-NAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLNGV 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L+ ++ ++ + + +L + L+ +R+ Sbjct: 67 DCIE---ELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVAR 123 Query: 128 H---------AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 AE + L SP E S + L+ E +VLR L G IA LL Sbjct: 124 GEMFIYPTMAAEFVYRHLVSP--REPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ K M +L +H AE+ + Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRY 210 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 13/207 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ PV ++GLK ++ T +Y +I+ A + + + ++I D++ Sbjct: 6 MLVDDHPVFRSGLKHILCTE-ADYHVIAEADDGESAIEMAAEANPDIIIMDISMPG---L 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + + +I + + + + E L + + LV V+ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 128 HAERISAMLT-------SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 I L P S ++V L+ E++VL+ + G+ +I++ L Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ K M ++ + + + Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRY 208 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 11/214 (5%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISS---ASAED-LTLLQLRRSGLVIADLAGE 62 K +++ +++ GL ++ + ++S S ED L LL+ R LV+ D+A Sbjct: 2 KRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAMP 61 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 E + + + + + A+ L + L+ E + L+ V Sbjct: 62 ---ELGGLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAV 118 Query: 123 ---RSGNTH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 G + ++ +S L + A+ + L+ E ++LR L G + IA L Sbjct: 119 GQLLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDL 178 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + S KT+S K +L H++ ++ A+ N+ Q Sbjct: 179 ELSIKTVSTYKARLFAKLGFHNDVDLIAYANNHQ 212 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 84/206 (40%), Gaps = 7/206 (3%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT-LLQLRRSGLVIADLAGESE 64 C+ +V+ P+++ G++ V+ + ++ +A + + R LV+ D+ E Sbjct: 7 CERVLVVDSHPIVRDGIEVVLGKAYAGIDVDGAADMAEASDRCGRDRPDLVLLDVMLPGE 66 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 DP ++ + + +V + ++A + + + L + +V+ +R Sbjct: 67 DPLPAMG---EILRAHPGLRFVVFTALGSEARAADAIRFGASGYLLKWCSPDGIVQAIRR 123 Query: 125 GNTHAERISAMLTSPAMTET---HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 I L + + LT E++VL+L+ G +IASLL S Sbjct: 124 VMAGRVHIDPSLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLLNIS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ + M++L + A + W Sbjct: 184 PKTVDCHRQRLMQKLGARNVATVIHW 209 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 117 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 +++ V++ GL+ ++ + E++S A + +++++ + + D+ + Sbjct: 9 LLVDDHAVVRGGLRLLLAQT-DDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG---K 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + ++ I + + + AV L + L+ P L+ +R Sbjct: 65 GGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAG 124 Query: 128 HAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +S L E + L+ E +VLR L G + QIA L S KT++ Sbjct: 125 GGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTVT 184 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + + + +HSNAE+ + Sbjct: 185 TYRARIVEKTGLHSNAELTRY 205 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 117 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 8/203 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDPR 67 ++ V++ GL++ + + E++I++ A+ L +R +V+ D+ + Sbjct: 5 LIADDHAVVRGGLRQFLSST-EEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLN-- 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + ++ + S A+ L + L+ P ++ + + Sbjct: 62 -GLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 128 HAERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 A +S L + T R L+ E VL LL KG + +I S KTI Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 S + + +L + SNAE+ ++ Sbjct: 181 STYRARILEKLDLASNAEITRYV 203 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 117 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 14/211 (6%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESE 64 K +++ P+ + GLK ++R P Y + A + L + L + D++ Sbjct: 4 KRLLIVDDHPLFREGLKAILRRD-PSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPD- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 RS + L + + + + E L L+ +NL+ +R+ Sbjct: 62 --RSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRA 119 Query: 125 GNTH--------AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 + IS L + + LT ER+V+RL+ +G ++A+ Sbjct: 120 VAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAA 179 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 L+ S KT + S MR+L + ++ E+ + Sbjct: 180 ALEISVKTAEHHRGSLMRKLGMQNSVELVRY 210 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 12/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ V++ GL+ ++ +H P +++I A + ++L +V+ D+A + Sbjct: 7 LLADDHTVVRKGLRLLLESH-PGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN-- 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + ++ VF+ S S ++ L L +L+ V + + Sbjct: 64 -GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSE 122 Query: 128 H----AERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + IS ML M + + +LT ER+VL+LL +G ++A++L S Sbjct: 123 GKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLS 182 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 T+ + + +++L +HS AE+ + Sbjct: 183 LYTVETHRGNILQKLNLHSGAELILY 208 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 76/207 (36%), Gaps = 9/207 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + G+K + + E + A+ E + L + ++ L+I D+ Sbjct: 5 VIAEDHTALIDGIKVFFE-YEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMP---VM 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ ++ I + ++L + + ++ L+ +R + Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + + +LT +R++L+L+G+G +IA L T+ Sbjct: 121 GEHYYDPNI---TVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVET 177 Query: 188 QKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + +R+L + E+ + + Sbjct: 178 HRKNMIRKLGLQGAGELLRYALEKKYD 204 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 I+ + + GL ++ H E EI+ A D L +R + + D++ + Sbjct: 5 IMADDHTIFRQGLAHLLSAHQ-ELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLNGL 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 V ++ + R + + + A++ + L+ + + Sbjct: 64 DV---VKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S + + + E V L+ E++V+RL+ G +IA L S KT+ Sbjct: 121 GKRFVS-EVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDT 179 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + MR+L +H+ A++ + Sbjct: 180 HRTRLMRKLNLHTTADVVRY 199 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 116 bits (290), Expect = 7e-25, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 80/202 (39%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 +++ +++ GL+ ++ + +++ AS+ L +R L I DL+ Sbjct: 16 LIVDDHVIVREGLQRILEATGAGW-VVAEASSGFQALEVMRHQPIDLAIVDLSMPG---M 71 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + +++ + + + + A+ ++ LV VR T Sbjct: 72 NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVAT 131 Query: 128 HAERISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++A L + + + + L+ E +VLR + G I IA L S KT+ Sbjct: 132 GGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTV 191 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S K+ +L + + A + + Sbjct: 192 STHKSRIQEKLQLPTMAALIRY 213 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 116 bits (290), Expect = 7e-25, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 +++ V++AGL+ ++ + P+ ++ A +T + L++ DL+ + Sbjct: 5 LLVDDHAVLRAGLRLLLES-QPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS--- 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S SL + + + + + L + L+ +R+ Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 128 HAERISAMLTSPAMTETHDF---SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 I LT + + + L+ ER+VL L+ +G+ +IA L S KT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + + M +L + S A + + Sbjct: 181 VETYRTRGMEKLGLRSRAALVQF 203 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 IV +++AGL ++ P E++ A E + LQ + LV+ DL E+ Sbjct: 6 IVTDDHELVRAGLLQLFEGA-PGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGENGA 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++ E + Y ++ + + + + + + + L++ + Sbjct: 65 NLIE---RIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVA 121 Query: 128 HAERISAMLTSPAM--TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S ++ + + +L+ E+++ RLL +G + I+ L S++T+ Sbjct: 122 TGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTV 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 SA K + + +L + + E+ + Sbjct: 182 SAHKINLLNKLGLKNVVELVHY 203 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 6/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESEDPR 67 ++ V++ GL ++ + ++ +++ AS + L + + + DL+ Sbjct: 11 LLADDHRVLRKGLSLLLSSE-EDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPH---M 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L + + + + S E L L L + +R+ Sbjct: 67 GGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAA 126 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + + L+ ER+VL L+ G+ ++ IA L S KT+S Sbjct: 127 GGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVST 186 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 K +++L N+E+ + Sbjct: 187 YKTRLLQKLDCTQNSELVDY 206 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 83/205 (40%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ +++ GLK ++ + E++++ A + R+ L++ DL+ Sbjct: 9 LITEDHALVRKGLKSLISSR-SEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMP---KM 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + L + E+ + + + + L L + + L +R+ Sbjct: 65 NGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMD 124 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI-----LTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S+ L+ + + R LT E++V +L+ +G QIA LL S Sbjct: 125 GKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISP 184 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ + + M++L +HS E+ + Sbjct: 185 KTVDKHRTNLMKKLDLHSAREVSNF 209 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 77/197 (39%), Gaps = 10/197 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPRS 68 + V++ G++ ++R P+ E + AS D L+ R ++++DL+ Sbjct: 25 IADDHHVVRQGIEALLR-MCPDMEYVGGASTVDEARQLVHRTRPDVLVSDLSMPGGSGVG 83 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 +L + + V + + + ++ + + LV +R ++ Sbjct: 84 ---FLRNLRRECPDTRIVVLTMHATALAMQDAFDSGAHAFVAKDDAFDTLVSIIRRVHSG 140 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 E L S M E S + L ER+VL+ + KG +I + L S KT+ Sbjct: 141 EEF----LFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVEVY 196 Query: 189 KNSAMRRLAIHSNAEMY 205 + M++ + E+ Sbjct: 197 RGRLMKKFNVTKGTELI 213 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 15/209 (7%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR-------SGLVIADLAGE 62 ++ +++ G++ ++ P+ ++ A + Q+RR L + D+A Sbjct: 31 LLADDHALVRRGVRLILDGE-PDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAMP 89 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + + L Y + + + E L A + +LV+ Sbjct: 90 R---MTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQAC 146 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSY----RSVILTLSERKVLRLLGKGWGINQIASLL 178 R+ + S + + + LT E ++L+L+ +G +IA L Sbjct: 147 RAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTL 206 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ + + + +L + E+ + Sbjct: 207 FISVKTVERHRANILAKLGMKDRLELTRY 235 >UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7V7K0_PSEA8 Length = 212 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 14/207 (6%) Query: 2 LPGCCKNGIVISKIPVMQAGLKEVMRT--HFPEYEIISSASAEDLTLLQLRRSGLVIADL 59 LPG ++ PVMQ L+ + ++ + + L L ++I +L Sbjct: 7 LPGL----VIADSFPVMQWALQRYLSEECGRQVLAVVGDSDSLVERLADLPPESILITEL 62 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 + R L ++ + S A +L + +S P+E L Sbjct: 63 GLPGQRSRDGIHLVEWLTRHCPQMKVMVYSVFSAPLLAKAVLRSGASAYISKRSPLETLK 122 Query: 120 KTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + + L H + L+ +E +LR L +G +++IA Sbjct: 123 AALECMALGQTFLDPGL--------HPQRHTGKPLSPTEVDILRRLARGDTVSEIAQRTM 174 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYA 206 +S TIS K +AM ++ ++S+AE+ A Sbjct: 175 RSVSTISTHKKNAMVKIGLNSDAELIA 201 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 84/203 (41%), Gaps = 8/203 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +V + + GLK+V+ T + ++ A E L +Q +VI D+ R Sbjct: 6 LVADDHAIFREGLKQVIGTTV-DMSVVDEAVDGKELLNKIQANDYDMVILDITMPG---R 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + S ++ + M A+ A L+ L+ + + Sbjct: 62 NGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISM 121 Query: 128 HAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S+ L ++ H+ L+ E +V+ ++ G + +IA+ L S KT+ Sbjct: 122 GKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTV 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 S + +R+L + +NAE+ ++ Sbjct: 182 STYRAHILRKLNMKNNAELTRFV 204 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 10/199 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPRS 68 + ++ GLK+V+ + A A+ L LL+ + L++ DL Sbjct: 12 LADDHAIVLEGLKQVLSGV-GNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPG---VD 67 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 L +++ + + + + A + L I LV + + Sbjct: 68 GLAFVERLRTRHPALRILVLTGSAGAGMAHAAIDAGANGYLVKSGDISELVPALMALREG 127 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 ++A T+PA + LT E ++L L+ +G IA+ L S T Sbjct: 128 RNFVAARATAPATAAPDGIA----TLTRRELQILMLIARGATAGDIAAQLDISPLTARKH 183 Query: 189 KNSAMRRLAIHSNAEMYAW 207 + + MR+L +H+ AE+ A+ Sbjct: 184 RENLMRKLDLHNTAEVVAY 202 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 114 bits (286), Expect = 2e-24, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 12/208 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPRS 68 + P++ +G+K ++ T PE E++ A L + + DL+ + Sbjct: 25 IADDHPLILSGMKTLLATD-PEIELVGEAVDGPSALRRAIDLDPDVAVFDLSMPGLN--- 80 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E L + + + + LL A + E LV+ + + Sbjct: 81 GIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVRGIHAVAHG 140 Query: 129 AERISAMLTSPAMTETHDFSYRSVI------LTLSERKVLRLLGKGWGINQIASLLKKSN 182 + + A+ + SV L+ E++VL+L G I++ L+ Sbjct: 141 GIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVISAKLEVGP 200 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINS 210 K++ K AM +L S ++ + S Sbjct: 201 KSVETYKARAMEKLGFTSRVDLIRFALS 228 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 77/201 (38%), Gaps = 7/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ V+++GL ++ H ++++ A + + + + DL+ Sbjct: 9 LLVDDHTVVRSGLCRLLEQH-SGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPG---M 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E ++++YR + + A++ L ++ + LVK V Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 128 HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 IS + A+ L+ E +V RL +G +IA +LK S KT++ Sbjct: 125 GKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVA 184 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 ++L + + EM + Sbjct: 185 NYHTLVKQKLGLSNPVEMVRF 205 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 10/205 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ V+++ LK M + E+I A E ++ R +V+ DL+ + Sbjct: 4 LIADDHAVVRSALK-FMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGENG 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + E + + + + L + E L+ +RS Sbjct: 63 --LLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 128 HAERISA--MLTSPAMTETHDFSYRSVI---LTLSERKVLRLLGKGWGINQIASLLKKSN 182 I +S + + I L+ E+++L L+ G+G +IA L S Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ K+ M++L + +++ + Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRF 205 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 84/211 (39%), Gaps = 14/211 (6%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESE 64 K +++ P+ + G+K ++ Y+ + A AE L L Q + LV D++ Sbjct: 4 KRVLIVDDHPLFREGVKSLVERS-ANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPD- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV---KT 121 S E ++ E + + + E + L+ Sbjct: 62 --MSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDA 119 Query: 122 VRSG-----NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 + G ++ + A L A + + +LT E++VLRL+ +G QIA+ Sbjct: 120 LCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAA 179 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 ++ S KT+ + + M++L +HS E+ + Sbjct: 180 AIELSPKTVENHRTNLMKKLDVHSKMELVKY 210 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 8/203 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSV 69 ++ +++ GL+ ++ E ++ + + L + +VI D+ + + Sbjct: 6 LIADDHAIVREGLRVLLERKGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNGSIA 65 Query: 70 CEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHA 129 E ++ + + + + + L +++ Sbjct: 66 TE---KIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGK 122 Query: 130 ERISAMLTSP-----AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 IS + ++ ER+VL+L+ +G QIA L S KT Sbjct: 123 YYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKT 182 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + A + + M +L I S A + + Sbjct: 183 VEAHRRNIMNKLMISSVAGLTRF 205 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR---SGLVIADLAGESEDP 66 ++ +++ G+K+++ + ++ + A + L +++ DL+ Sbjct: 5 LIADDHAIVREGIKKILA-LAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPGVT- 62 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + +QY + + A + A ++ E L++ +R Sbjct: 63 --GMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVA 120 Query: 127 THAERISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 I L + S IL+ E ++ LL G +N IA +L SNKT Sbjct: 121 AGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 +S K + + ++ +HS A++ + Sbjct: 181 VSTHKLNLITKMKLHSTADLVHY 203 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 114 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 92/214 (42%), Gaps = 15/214 (7%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED----LTLLQLRRSGLVIAD 58 P +++ P+M+ GL++++ E ++ AE+ L L++ + LV+AD Sbjct: 9 PAKATKILLVDDHPMMREGLRQIIGN---EIDLAVCGEAENAFQALELVKSEKPDLVLAD 65 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + ++ E L +Q+ ++ + + A +L + E + + Sbjct: 66 ITLPDKN---GLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKI 122 Query: 119 VKTVRSGNTHAERISAMLTSP-----AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 ++ +R + +S +++ + T S LT E +V RL+G+G + Sbjct: 123 MQAIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKE 182 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 IA+ + S KT+ + + +L + + AE+ + Sbjct: 183 IAANMHVSAKTVEVHRMNIKTKLGLKTAAELIRY 216 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +M+ GLK ++ E+++ A+ + +V+ DL Sbjct: 16 LLVDDHKIMRKGLKAILA-LEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMP---EM 71 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E +++ + ++ + + + +E L +E LV + + + Sbjct: 72 NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVAS 131 Query: 128 HAERISAMLTSPAMT-----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + +TS + + S V L+ ER+VL+L+ G +IA S Sbjct: 132 GEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSI 191 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KT++ Q+ S M++L + + A++ + Sbjct: 192 KTVAVQRMSVMKKLNLFNVADLTKY 216 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 79/201 (39%), Gaps = 6/201 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL-LQLRRSGLVIADLAGESEDPRS 68 ++ + ++GL+ ++ FP + +A+ D+ L + +++ D++ ++ Sbjct: 5 LLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQN--- 61 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 L ++ + V + ++ L + L+ E L++ +RS Sbjct: 62 SLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVLAG 121 Query: 129 AERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + L L+ E ++ L +++IA L+ S KT+S Sbjct: 122 RRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVKTVS 181 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + + ++A+ SNAE+ + Sbjct: 182 TYRGRILEKMALRSNAELMQY 202 >UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia RepID=A4TJY3_YERPP Length = 210 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA-SAEDLTLLQLRRSGLVIADLAGESED 65 K+ +++ P ++ + ++ I S +E L L+ LVI D+ + D Sbjct: 3 KSVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEKLKNNPVDLVIIDIELPNFD 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S+ + + +F+ +++ AV L +S + I ++ ++ Sbjct: 63 GFSLLKKLQQ--RGFTG-KSLFLSAKNEQVFAVRALQAGANGFISKNKDISEILFAAQNV 119 Query: 126 NTHAERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + + +HD R+ +L+ E VLR L G QIA + SNK Sbjct: 120 LRGYSFFPSETLTQLAGQPSSHDPVNRARLLSEREINVLRYLVNGLSNKQIADEMFISNK 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T+S K + +L + S E+ + ++ Sbjct: 180 TVSTYKTRILTKLGLSSVIELADYAHT 206 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + + L+ ++ P I+ AS E + L+ + + D+ Sbjct: 6 VLADDHQMFRHALRAMLEKE-PGIRIVGEASNGDELIDLISHQPVDIACVDIGMPG---M 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E L++ + + + + S ++LL ++ E E L++ + + Sbjct: 62 NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 128 HAERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + + D + + +T ER+VL+L+ +G+ +IA L + T Sbjct: 122 SKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPST 181 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + + + MR+L +HS AE+ + Sbjct: 182 VEVHRRNIMRKLDLHSVAELTKY 204 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +V P+++ GL + + + A S E L ++ + L++ D Sbjct: 5 LVADDHPLIRIGLSH-LCALAGDMAVTFQAATSGEVLDRIRKQDFDLLVLDTEMPGITGA 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + + + + + +L A LS E L+ +R + Sbjct: 64 ---ELIARVHAHVPRLPILAFSVHNEAQVVRRILYAGAAGYLSKDCDPETLLFAIRKIAS 120 Query: 128 HAERISAMLTSP-AMTETHDFSYR-SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 I L A + D S R L+ E +LRLL G +N +AS L SNKT+ Sbjct: 121 GGRFIDLKLAERIAFHKKKDESKRPHEQLSNRELCILRLLVAGKTVNDVASQLVISNKTV 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S K M ++ SNAEM + Sbjct: 181 STHKARMMEKMGFQSNAEMIRY 202 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 13/211 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL------RRSGLVIADLAGES 63 ++I +++ G++ + T P E++ A + L L R LVI D+ Sbjct: 118 LLIDDHALVRDGMRMHL-TLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMRG 176 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 +L +Y E+ + + + + + P + L+ ++ Sbjct: 177 ---MGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQ 233 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + SA + + LT ER +L +G+G IA L S + Sbjct: 234 AVLAGRVFYSARIARGMAAQA---VSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVR 290 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 T+ + + R+L I AE+ + G Sbjct: 291 TVETHRLNLKRKLGIEGRAELVKYAVQQLGL 321 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 113 bits (282), Expect = 7e-24, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 80/201 (39%), Gaps = 8/201 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPRS 68 + PV++ L++++ P +++ A D L R + L + D + S Sbjct: 1 MADDHPVVRQRLRQILMAE-PALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLS 59 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + EH + + + + A +L + L E L++ +R+ Sbjct: 60 LIEHV---RRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAG 116 Query: 129 AERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +SA + + L+ E +V+ LL G I +IA L +T++ Sbjct: 117 GTHVSAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVA 176 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + ++ +R+L +H AE+ ++ Sbjct: 177 SYRHRVLRKLGLHDTAELVSY 197 >UniRef50_A5FQU5 Two component transcriptional regulator, LuxR family n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU5_DEHSB Length = 209 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 5/205 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL-LQLRRSGLVIADLAGESEDP 66 N +++ P+++AG+K ++ + + + +A++ L + L++ DL Sbjct: 3 NILIVDDHPIVRAGVKTILNAERGMFTLDEAQNAKETKLKISANNYDLILLDLTLPDSQG 62 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 ++ + ++ + + + + + +S L+K +R Sbjct: 63 LNLLKDIKTIKKHTP---ILVLSVHPEEQYGIRCIKAGASGFISKESAPFELIKAIRKVQ 119 Query: 127 THAERISAMLTSPAMTETHD-FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 IS L + D R + L+ E + + +G + ++A K S KTI Sbjct: 120 AGGRYISPALAEIMACQIFDKDGPRHLCLSDREFDIFIGIAQGLRVTELAERFKLSPKTI 179 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINS 210 + + ++ + SN E+ + ++ Sbjct: 180 YTYREHVLTKMGLSSNVELARYADT 204 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 77/205 (37%), Gaps = 10/205 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL---LQLRRSGLVIADLAGESEDP 66 ++ +++ G+K ++ +++ L ++ + + + D+A + Sbjct: 5 LLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMPILN- 63 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 L+ + + + + + + V + +++ ++ + Sbjct: 64 --GIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEVS 121 Query: 127 TH----AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 ++S + + + LT E+++L+L+ +G+ +IA S Sbjct: 122 AGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSL 181 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 T+ +N+ MR+L IH AE+ + Sbjct: 182 NTVHVHRNNIMRKLDIHKQAELVRY 206 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ +++ G + +++ E+I+ A E + + + +V+ D++ + Sbjct: 8 MLVDDHAIVREGYRSLLQK-QDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQSGL 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E ++ + S A++ ++ E+L++ + Sbjct: 67 KAIERIRQFDAKA---KILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI-LTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + +SA + E ++ LT+ E ++LRLL IA LL S KT+S Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNT 231 ++L + S+ E+ A +NL + +A E N+ Sbjct: 184 NSHYIIKKKLGVSSDIELTRL---AIKMNLVNLLDLVDEAHEDNS 225 >UniRef50_Q391P2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. 383 RepID=Q391P2_BURS3 Length = 216 Score = 112 bits (280), Expect = 9e-24, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 10/204 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ P+++ GL ++ + P Y++++ A E L ++ R + + DL Sbjct: 6 VLVDDHPIVREGLATLLHSV-PGYQVVAQAGNERDGLDAVRTHRPDIAVIDLML---GDT 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++ Y + V + S + A + ++ ++ + S Sbjct: 62 LALRLIETIAHTYPDTAVVCISMHSDAAYAEPAALAGALGYVNKANVSRTILDAIDSVLR 121 Query: 128 HAERISAM----LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 L A + + L+ E ++LR++G+G QIA + S Sbjct: 122 GVPYFPPEVQQNLLRRARGQAAKPTTPLAALSPREIEILRMIGEGLTKQQIAERIGHSAN 181 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 T+ A + + R+L + +NAE+ + Sbjct: 182 TVEAHRTNIKRKLGLDNNAELIRF 205 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GL+ ++ + YE+ A SA + L++ + +++ DL+ R Sbjct: 72 LIADDHALVRDGLRHIL-QNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPG---R 127 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + + + + + + AV + L+ LV V + Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 128 HAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S + ++ + L+ E V R + G + QIA L S KT+ Sbjct: 188 GGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S K + ++ + A + + Sbjct: 248 STYKTRILEKMQMPHEAALVRY 269 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 80/205 (39%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ + G+++++ + ++++ A E L L +V+ D+ Sbjct: 5 IIADDHELFLEGVRDILSRE-DDLDVLALARTGQEALELTLQHHPDVVVMDVTMP---KM 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + S ++ + + + E+L + E L++ + ++ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 128 HAERISAMLTSPAMTETHDFS-----YRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S + S + + R+ +L+ ER+VL LL KG ++AS L S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 T+ + M +L + AE+ + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRF 205 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 81/202 (40%), Gaps = 9/202 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS-AEDLTLLQLRRSGLVIADLAGESEDPRS 68 ++I ++ L + ++ + + + E + ++ R +V+ DL+ + Sbjct: 22 LIIDDHALLGESLARFLGSN--DMQAVWCGDLVEAMQSIRDRSWSVVLLDLSMPRGNGLD 79 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR---SG 125 + + + + ++ + + A+ L A L+ + LV+ ++ G Sbjct: 80 LLKRIKLM---HPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVVHG 136 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + A + M E L+ E +V L +G +NQ+A L S KT+ Sbjct: 137 GRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCKTV 196 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S K M +LA+ ++A++ + Sbjct: 197 STHKTRLMHKLALDNDADLVRY 218 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 21/207 (10%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 ++I + + G+K ++ ++E+++ S D L L++ + +VI D+ + Sbjct: 40 VLIDDHKLFREGIKRIL-DFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVN-- 96 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E LI Y + + + S + L L + L++ VR Sbjct: 97 -GVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAE 155 Query: 128 HAERISAMLTSPAMTET---------------HDFSYRSVILTLSERKVLRLLGKGWGIN 172 + +T + E D +LT E +VL+LL G Sbjct: 156 GGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNK 215 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIH 199 IA L S KT+ ++ +++L ++ Sbjct: 216 GIADALYISEKTVKNHVSNILQKLNVN 242 >UniRef50_B1T3D5 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3D5_9BURK Length = 218 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 8/201 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPRS 68 V PV+ AG++ +++ P EI A A + ++ + +++ D E Sbjct: 8 VADDHPVVLAGIENLIKNA-PGLEIAFLADTMAAMIEAIESQPIDVLVCDYEFSDEPLTD 66 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEP-IENLVKTVRSGNT 127 S+ ++ + + +R+ L+ + V+ L + + + + Sbjct: 67 GLNLLASIRRRFPALKVLLTSTRTAPGIVSAALIYGATGFIGKVQANPSTLTRAILAVHA 126 Query: 128 HAERISAMLTSPAMTETHDFSYR----SVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + +S ++ V L+ E +V+ L+ + + +IA L +S Sbjct: 127 GSIYLSPEFDGNVLSCFLRVIRAFNAVPVALSDLELQVVGLICRDVAMPEIARRLNRSPG 186 Query: 184 TISAQKNSAMRRLAIHSNAEM 204 TI+ +K +AM++LA S+AE+ Sbjct: 187 TIAGRKRAAMKKLAAGSDAEL 207 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 14/210 (6%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESE 64 K ++I P+ + GL+ + T P+ ++ A AE L L Q L + D++ Sbjct: 5 KRILIIDDHPLYRDGLRARLDTR-PDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDG 63 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDV---EPIENLVKT 121 S E + ++ + + + + +S E I ++T Sbjct: 64 ---SGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIET 120 Query: 122 VRSGNTH-----AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 V SG + + + L+ + + L+L E++V+RLL +G +IA+ Sbjct: 121 VLSGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAA 180 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 L S KT+ + + M +L I S Sbjct: 181 KLFVSRKTVLNHRYAIMTKLGIKSPVAFVR 210 >UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTG7_9GAMM Length = 214 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 14/211 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 +++ V++ GLK+++ H ++ A+ + Q+R+ LV+ D+ R Sbjct: 5 LLVDDHAVVRNGLKQMLIEHLGSV-VLGEANDAIEAMQQVRKQDWGLVVLDIRLPG---R 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + + S+ + + + S AV L+ A +S ++K V++ Sbjct: 61 SGVDVLKQIKSEKPHLPVLILSSYPESQYAVRLIQAGAAGYISKDSEETEIIKAVKTAAA 120 Query: 128 HAERIS-------AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 I+ A S + + D S L+ E ++ L G IA L+ Sbjct: 121 GGRYINEIVGGLLANTMSRSFSNADDLSL-YESLSDREYQIFLELASGKRAKDIAEKLQV 179 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 S KT++ ++ M+++ +NAE+ + N + Sbjct: 180 SAKTVATHRSRLMQKMGFSTNAELILYANKS 210 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 77/199 (38%), Gaps = 17/199 (8%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESEDPRS 68 +I ++++G +++ P+ ++++ + L L R + I D++ Sbjct: 6 LIDDHLIVRSGFAQLL-GLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD----- 59 Query: 69 VCEHYYSLISQYR-EIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L+SQ + + + + + L LS + L+ V + T Sbjct: 60 --ISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ + + D LT ER+V L +G + +IA+ L S KT+ Sbjct: 118 GGCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Query: 188 QKNSAMRRLAIHSNAEMYA 206 + + M +L + ++ E+ Sbjct: 172 HRANLMEKLGVSNDVELAR 190 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 84/204 (41%), Gaps = 11/204 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ +++ G+K ++++ E+E++ A E + + +V+ D+ + Sbjct: 8 IIADDHTLIRDGIKSLLQSV-DEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP---KK 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + + ++ + ++ + + L E ++K V++ + Sbjct: 64 SGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSA 123 Query: 128 HAERISAMLTS-----PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + S + S A E S + LT E +VL+ + G IA L S Sbjct: 124 GQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISV 183 Query: 183 KTISAQKNSAMRRLAIHSNAEMYA 206 +T+ + + M++L +H++AE+ Sbjct: 184 RTVETHRINLMKKLDVHNSAELIK 207 >UniRef50_Q07MS7 Two component transcriptional regulator, LuxR family n=4 Tax=Bradyrhizobiaceae RepID=Q07MS7_RHOP5 Length = 210 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 11/210 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 +++ P++ +G + + PE EI+ + AE + + R + + D+ Sbjct: 4 LIVDDHPIIASGCRALFAGD-PEIEILEAHDAESGERGFVTERP-DVCVLDINLPG---V 58 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E ++++ + + A + +S +L +R Sbjct: 59 SGFELARRILAREPGARIIMFSMNDDPAFAARAIEAGAKGYVSKAGDPCDLADAIREVGE 118 Query: 128 HAERISAMLT-SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 ++ S A R L E ++LRL+ G +++IA ++ S KTI Sbjct: 119 GGVYLAPATAKSIAFAAIGSPENRLAKLNAREIEILRLIAAGNSLSEIAWQVRASYKTI- 177 Query: 187 AQKNSAMR-RLAIHSNAEMYAW-INSAQGA 214 A +S MR +L + S+AE+ I S GA Sbjct: 178 ANTSSLMRQKLGVRSSAELMRLAIQSGLGA 207 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 10/212 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 +++ P+++ G+ + + ++ A + + L + L I D++ E Sbjct: 17 MMVDDHPLVREGMARFL-NLQGDLDLCCEAGSVEEALAVVADCNPALAIIDISLNGE--- 72 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E +L +Y + + + A L L E N++ VR Sbjct: 73 SGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILLAVRRVLA 132 Query: 128 HAERISAMLTSPAMTETHDFSYRS----VILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +SA + S + L+ E ++L LLG G+G Q+A L +S K Sbjct: 133 GDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVADKLNRSIK 192 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 TI + S +L + S A++ + R Sbjct: 193 TIETHRASLKEKLQLKSGADLVRFAIQWLEDR 224 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 8/199 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ +++ + ++R P+ +I++ A + + +R +V+ DL Sbjct: 5 VLADDHRLIRQAIDGMLRDI-PDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPG---M 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L + ++ + + L + + L++ +RS Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 I + + D + S LT E +VL + G IA L S KT+ Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 186 SAQKNSAMRRLAIHSNAEM 204 S ++ RL + ++A++ Sbjct: 181 STYRSRIFERLGVRNDAQL 199 >UniRef50_A6GSJ6 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSJ6_9BURK Length = 236 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 87/227 (38%), Gaps = 24/227 (10%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 I++ ++AG K + + + ++ A D LL+ + ++ D++ + Sbjct: 8 ILVDDHAAVRAGYKRFIDSE-SDLIVVGEAGNADQAFALLKTQACDALVLDISMPG---Q 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + ++ ++ V + A + L ++ E L++ +R Sbjct: 64 SGLELIKRVRMKWPKLALVVLSMHDSPVVATKALEQGARAYVTKSSEPEELIQGIRMALG 123 Query: 128 HAERISAMLTS------------------PAMTETHDFSYRSVILTLSERKVLRLLGKGW 169 +S+ + S P+ + + LT E V+RLL +G Sbjct: 124 EQTFVSSDVQSQGMLTGSLQQQGQENLQLPSCETQDSAATTACGLTPREVDVVRLLVEGH 183 Query: 170 GINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 I Q+A L S KT+S + ++L + ++ E+ W S R+ Sbjct: 184 TIEQVAVSLGISGKTVSNNLSQIRQKLGVQTDFELAFWAWSQGFGRK 230 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 13/202 (6%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESEDPRS 68 ++ P+ + GL + ++ I+ A+ L + +V+ D++ + Sbjct: 5 IVDDHPIFREGLIARLSMD-DDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNGMD 63 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL---VKTVRSG 125 E ++ EI + + + +L + ++ + +G Sbjct: 64 AAEI---FKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + R + L + E + +LT E+ VLRLL G ++A L S +TI Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNT----VLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 + + +LAI ++A + + Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRY 198 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 12/203 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 I+ +++ GLK ++++ P + AS + L + LV+ D++ Sbjct: 8 IIAEDHTLLREGLKSLLQSV-PHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPR---M 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + ++ E+ + + L + + + V S Sbjct: 64 DGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLG 123 Query: 128 HAERISAMLTSPAM------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +S ++ + S LT E+++ +L+ +G+ +IA +L S Sbjct: 124 GKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEM 204 KT+ +++ M++L +HS AE+ Sbjct: 184 VKTVEKHRSNLMQKLGVHSAAEL 206 >UniRef50_A6C9W9 Two component transcriptional regulator, LuxR family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9W9_9PLAN Length = 221 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 12/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 + + V+ + + P+ E++ +A+ D L + + +VI D+ Sbjct: 11 VFVDDHMVLVDSIVSRFQRD-PDIEVVGTATNADEGLALILETEPDVVILDVELPGRGSF 69 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + S+ + +F+ L L EPIE+L+ ++ + Sbjct: 70 DIAE---EISSRLKNTKMIFLTGYLSDIFIELALRVNAKGYLLKGEPIESLIHAIKKASR 126 Query: 128 H----AERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKS 181 ++ + L E + +S++ LT + +VLR L +G + ++A + S Sbjct: 127 GEYCFSQSVQERLVFDHKKERYSIQSKSMLTSLTSRQIEVLRHLARGKSVKEVARSMHLS 186 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 K+I + K M +L IH E+ + Sbjct: 187 EKSIDSHKYRIMHKLGIHDRVELARY 212 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 12/214 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL-LQLRRS-GLVIADLAGESEDPR 67 ++ +++AGL+ ++ + ++I AS + L L + + D++ Sbjct: 5 LLADDHVIVRAGLRRIIEDS-EDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPG---I 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L ++ ++ + + V + ++ E LV +R ++ Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 128 HAERI---SAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + +A L + ++ L+ E +VLR L G +IA S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN 218 + + +++L + +NA++ + A +N Sbjct: 181 VDTYRARLLKKLNLRNNADISRF---AIQNNLIN 211 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ PV++ G +E++ + ++ A + + +L+ R+ +++ D++ Sbjct: 18 LLVDDHPVVRKGTRELLEGE-ADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG---M 73 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSD---VEPIENLVKTVRS 124 + E ++ ++ + + + S + LL A L + + V+ V + Sbjct: 74 NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAA 133 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 G + A + + L+ E +VLR+ G +IA L S +T Sbjct: 134 GESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRT 193 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + + +L + S E + Sbjct: 194 VQVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 7/209 (3%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAG 61 G N +V+ ++ GL + +PE +I S + R LV DL Sbjct: 6 GKVINILVVDDHSLIFDGLLGCLA-PYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKL 64 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 + L ++ E+ + + + A E L + P L+ Sbjct: 65 PG---MGGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAA 121 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKK 180 ++ I L + + +LT E++VL+L+ +G IA L Sbjct: 122 IKCVCKGKNFIDPSLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVI 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 KT+ + + MR+L H+ AE+ W+ Sbjct: 182 GLKTVETHRMNLMRKLNAHNVAELMHWVQ 210 >UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14 Tax=Lactobacillus RepID=A5VJY7_LACRD Length = 217 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 12/207 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISS-ASAEDLTL-LQLRRSGLVIADLAGESEDPR 67 +V P+++ +K ++ +++I+ A+ D +L + ++I DLA + Sbjct: 5 LVADNYPIIRMAVKNLVEQ-LDNFKVIAEEATGIDASLRAEQGDIDIIIMDLAMPPGENG 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + + SR+ + + + + + LV +R Sbjct: 64 LIT--IKRIHEHFPNTKIIIFSSRNEPQYINQAIYNGANSYILKSSSPKELVHALRHAIN 121 Query: 128 HAERI-------SAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + L H V L+ E+++L L+ G+ +IA+ + Sbjct: 122 GEKYLDNNIMVTKKDLLVIKGGSPHFDLGNYVALSKREQEILPLIVLGYTNKEIATKMFI 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ A K M++L + S+AE+ + Sbjct: 182 SPKTVEAHKTKIMQKLNLASHAELLHY 208 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 11/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESEDP- 66 +++ P+++AG + ++ + EI+ A +VI DL S+ Sbjct: 8 LLVDDHPLVRAGFQRLLISD-ESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDANT 66 Query: 67 -------RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 E +IS + + + + ++ L+ + L+ Sbjct: 67 EEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDELL 126 Query: 120 KTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + V++ + E I+ + LT E ++ LL +G ++ +A + Sbjct: 127 EAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVAEEMF 186 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMY 205 S KT+ A + + R+L I +N+E+ Sbjct: 187 LSPKTVHAHRTNIFRKLKISNNSELV 212 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 7/199 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ +++ G + +++ P ++++ A AE L + + LVI DL Sbjct: 8 LLVDDHAIVREGYRALLQQ-QPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPG---L 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + + + AV+ + ++ P E L++ Sbjct: 64 GGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQ 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 +SA + + + +LT E ++LRLL IA++L S KT++ Sbjct: 124 GRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVA 183 Query: 187 AQKNSAMRRLAIHSNAEMY 205 + +L + S+ E+ Sbjct: 184 NTRYLIKAKLGVASDIELV 202 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 76/204 (37%), Gaps = 10/204 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ +++ GL ++ + +++ AS + + + + + D++ + Sbjct: 5 MLADDHTILRQGLVSLLSKD-ADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN-- 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS--- 124 E + + E + + + ++ + L E L+ V++ Sbjct: 62 -GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 125 -GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +++ +++L + ++ LT ER+V L+ G IA L S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 T + + +L + + AE+ + Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRY 204 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 85/201 (42%), Gaps = 7/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +++ V+ G + PE E++++AS E L L++L + +V+ D++ Sbjct: 12 VMVDDHQVVLDGFIARLEQE-PEIEVVATASNGLEALELVKLHQPDVVLMDVSMP---IM 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + + + + ++++ + +V+ +++ + Sbjct: 68 NGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQ 127 Query: 128 HAERISAMLTSPAMTET-HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 A TS ++ + + L+ E +LR++ +G +IA+LL S +T+ Sbjct: 128 GATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + + +L IHS AE+ + Sbjct: 188 THRQNIKHKLDIHSTAELAQY 208 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIIS-SASAED--LTLLQLRRSGLVIADLAGESE 64 N +I V+++G +++ + + +++ ASA D ++LL+L + + D+A E Sbjct: 5 NVALIDDHIVVRSGFAQLL-SLEGDIQVVGQYASAADAGVSLLKLN-VDVAVMDIAMPDE 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S+ +R + + + L L+ E LV+ VR+ Sbjct: 63 SGLSLLARLRQKRPTFRA---IILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRA 119 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + A A+ + LT ER++ LL G + IA L S+KT Sbjct: 120 VHAGGSYLCADAMR-ALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + + + + +L + E+ + Q Sbjct: 179 VHVHRANVLDKLHCATTVELVHFALQHQ 206 >UniRef50_B1T3D0 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia RepID=B1T3D0_9BURK Length = 226 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 15/223 (6%) Query: 11 VISKIPVMQAGLKEVMRT-HFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSV 69 + P++ G++ ++ + H E +++ +E L + +++ + + + Sbjct: 8 IADNQPIVVHGIRSILASYHDIEIRFLATNLSEMFGFLACEQIDVLLTNDRFDGDILPDG 67 Query: 70 CEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEP-IENLVKTVRSGNT- 127 + + + + L+ A + + +L +R T Sbjct: 68 VRMLARIQRDAPDTKVLIFGAHEKTYVISHLISSGAAGFVGRSKECFSDLGLAIRHVATQ 127 Query: 128 ----HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 I+ L ++T+ H S +L+ E V L+ G I +I+ L +S K Sbjct: 128 RIPYLPPSIANSLLYFSLTKRHHLS--IELLSEKEMAVATLIRDGLSIAEISKRLCRSPK 185 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDA 226 TIS QKNSA+++L + ++ E+ A+ + P + Sbjct: 186 TISNQKNSAIKKLGVRNDVEL------AKALGDYFDPQHHLPP 222 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 77/206 (37%), Gaps = 13/206 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 ++ P+++ GL+ ++ P+ ++ A D L + + + + D++ Sbjct: 9 LLADDHPIVRVGLRALLEAE-PDIAVVGEAGTADEAVELARTLQPDVAVLDISMPGNG-- 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + S + + + + +L + + +LV+ +R Sbjct: 66 --LEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVAR 123 Query: 128 HAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 I + D + + +L+ ER+VLRL G+ +IA L S Sbjct: 124 GEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ ++ M++L +E+ + Sbjct: 184 PKTVETYRHRVMQKLGFSRRSELVRF 209 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 90/241 (37%), Gaps = 20/241 (8%) Query: 3 PGCCKNGI-VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADL 59 P K I V+ P+M+ GL+ ++ P+ E+I A+ + R LVIAD+ Sbjct: 37 PATTKTRIYVVDDHPLMRMGLRAMINGE-PDMEVIGEAADSATATAEIMKLRPDLVIADI 95 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 + S E ++ + I V + A+ +L + + ++ Sbjct: 96 SLRGN---SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVL 152 Query: 120 KTVRSGNTHAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQ 173 +R +S + + + D + L+ E +++ L+G+G + Sbjct: 153 DAIRRARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTRE 212 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI-------NSAQGARELNLPSVYGDA 226 IA+ L S KT+ + R+L + + ++ + +A G + P Sbjct: 213 IAAKLFLSIKTVETHRVHIKRKLNLANATQLVQFCVRWVEENKAAAGVGAIAEPPAALQQ 272 Query: 227 A 227 A Sbjct: 273 A 273 >UniRef50_C7LUF3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF3_DESBD Length = 203 Score = 110 bits (274), Expect = 5e-23, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 11/201 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL-LQLRRSGLVIADLAGESEDPRS 68 +++ V++ G ++ FPE E + + + L L+ R LVI D++ Sbjct: 4 LIVDDHAVVRRGTMNIIIDRFPECEFSEAGTLHEARLVLEDARFDLVILDISLPDGSGLD 63 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E+ + + + A L LS E L + + S Sbjct: 64 FLEYAQE---HSPGLPVIMLSMHHEIEYAQRCLSLGARGYLSKNSAPEELEEAMISILDG 120 Query: 129 AERISA-MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ +L S T D L+ ER V R L KG + IA + S KT S Sbjct: 121 GIYVNPSLLDSRRSTSAMD------TLSRQERDVARRLAKGETMTAIAQAMGVSVKTAST 174 Query: 188 QKNSAMRRLAIHSNAEMYAWI 208 + AMR+L I + + + ++ Sbjct: 175 YRTRAMRKLGIATTSGLIRYL 195 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 110 bits (274), Expect = 5e-23, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 11/204 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL------QLRRSGLVIADLAGES 63 I++ P ++ G++ + + ++ A + D + R +V+ D++ Sbjct: 8 ILVDDHPFVRDGVRMRLEAT-DDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISMRG 66 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 S E ++ I + + + + + P + LV +R Sbjct: 67 ---MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIR 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + S L S + LT E L L G+ QIA L S + Sbjct: 124 AVHAGETFFSPEL-QQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVR 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 T+ + + R+L I AE+ + Sbjct: 183 TVETHRLNLRRKLRITGQAELVKY 206 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 110 bits (274), Expect = 5e-23, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 8/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 N ++ PV++ G+K+V+ + +++ +L ++I ++ + Sbjct: 20 NVLIADNHPVVRLGIKQVLEND-GDIQVLGDVGTTTALFQMLSKATPDVLILEMDIPEIN 78 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + +Y E+ + +S A+ + LS + L V Sbjct: 79 ---GIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKV 135 Query: 126 NTHAERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + I+ L + R L+ E +VL++L G ++A L + K Sbjct: 136 SDGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLNLNEK 195 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+S K M++L + + ++ + + Sbjct: 196 TVSTYKARLMKKLNVDNMVDLLQQAKALE 224 >UniRef50_Q470N3 Two component transcriptional regulator, LuxR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q470N3_RALEJ Length = 206 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 9/200 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 ++ V++ G + ++ +++ D L R+ ++I DL+ R Sbjct: 7 VITDDHAVVRTGYRRLLELD-EGMRVVAEFGDADTAYDWLVRNRADVLILDLSMPG---R 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L + +H + + ++ + L+ E LV VR Sbjct: 63 GGLEMLQRLRIRVPALHTLVFSMHDSAAIVMQAMRAGAVGYLTKNSAPEALVDAVRRVAG 122 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +S + A + L+ E + R +G + +A+ S KT++ Sbjct: 123 GLRVLSDDI---AGLLDTGGQPPHLALSPREFDLFRQFARGTALEDVAARFCLSTKTVAN 179 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + +++ + + EM+ + Sbjct: 180 YQTLIRKKMGLANRIEMHRY 199 >UniRef50_B4STD4 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STD4_STRM5 Length = 244 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 8/202 (3%) Query: 20 AGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRS--GLVIADLAGESEDPRSVCEHYYS 75 G++EV+ ++ S S + L LQ + + L++ D A D E Sbjct: 25 HGVQEVLAR-QAGLQVDGSYGRSGDLLQRLQQQAAAIDLLLVD-ALPMGDSGEGLELLRH 82 Query: 76 LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAM 135 L + + + + + L LS + L++ V + Sbjct: 83 LSRHWPAVPILVLSAHCNAGVVSLALQAGARGFLSKACAPQMLLRAVSVVARGGRFVPPE 142 Query: 136 LTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAM 193 L + R L+ ER VL+ + +G ++A ++ TIS QK +A Sbjct: 143 LRAQWNQSRRQRQQPVRPPRLSTRERTVLQWVLRGCSTGEMAHRSGRTASTISTQKRAAY 202 Query: 194 RRLAIHSNAEMYAWINSAQGAR 215 R+L I ++ E++ + + R Sbjct: 203 RKLGIRNDGELFRFRHLIDADR 224 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 109 bits (273), Expect = 7e-23, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 IV+ +++AG + V+ P++E++ AS+ E + L + R +V+ DLA Sbjct: 14 IVVDDHDLIRAGFRLVLEQE-PDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPG---V 69 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + ++ ++ + + + +E L A + P+ ++ +R + Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 128 HAERISAMLTSPAMT------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 ++ L + + + LT ER+VL L+ +G +IA L S Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 182 NKTISAQKNSAMRRLAIH 199 T + + +R+L + Sbjct: 190 RGTAKSHVQNIIRKLGVS 207 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 109 bits (273), Expect = 7e-23, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 10/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ P+++ GL+ V +E++ AS L++ S +V+ DL + Sbjct: 15 LIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPT---M 70 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L + + + + + S + + L P E+L++ VR+ Sbjct: 71 GGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAA 130 Query: 128 H----AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 A ++ L + T + + LT E +VLRL+ G + A L S Sbjct: 131 GQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEA 190 Query: 184 TISAQKNSAMRRLAIHSNAEMYA 206 T+ A + + A A Sbjct: 191 TVKTHLLHAYAKFGVRDRAAAVA 213 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 109 bits (273), Expect = 7e-23, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 79/202 (39%), Gaps = 6/202 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 N I+ ++ GLK ++ H P +++ AS E L L++ + + D++ Sbjct: 8 NIIIADDHQIVIDGLKSLLVAH-PHIKVVGEASDGEEALKLIENNTVNIAVLDISMP--- 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + +Y I + + EL + E V+ + + Sbjct: 64 KMNGVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETI 123 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 N E I + + + +++ T E+ VLRL+ ++I++ L +N T+ Sbjct: 124 NNGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTV 183 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 + + + + + S+ + + Sbjct: 184 ETHRRNLIEKTGVKSSLGLVRY 205 >UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria RepID=A0M543_GRAFK Length = 212 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 77/208 (37%), Gaps = 9/208 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISS--ASAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ P++ G+K V++ + P ++ + + L+ ++I +L Sbjct: 5 LIADHHPIILEGVKCVLQNN-PALQVTGRVGSGTQLFNQLEKDAPDVLIVELDLP---QI 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + ++ E+ + S A+ + A +S E L K + Sbjct: 61 NGINAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAAGYISKHTDNETLEKAIYQVAR 120 Query: 128 HAERISAML---TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 ++ + + ++ + L+ E +VL LL G IA L + KT Sbjct: 121 GGIYLNRSITEKLNSGISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINEKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +S K +++L + + A++ Q Sbjct: 181 VSTYKTRLLKKLKVDNVADLITQSRLLQ 208 >UniRef50_C2G4N5 Response regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2G4N5_9SPHI Length = 216 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 7/210 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL-TLLQLRRSGLVIADLAGESED 65 +N +V PV + G+ ++ + +I ++S E+L ++L + + L+I ++ + + Sbjct: 4 RNILVADSHPVARLGVSTLLEQFLTDIDIYIASSFEELQSMLFVVKYDLLIMEIELPNGN 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 ++ ++S +++ + + + A M T +S + IE + +++ Sbjct: 64 WVAI---IDQILSVQKDLKIIILSKQDNKFLASASFMKKTFAYVSKDQSIEYIRNVIQTV 120 Query: 126 NTHAERISAMLTSPAMTET---HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + ++ TS T ++ SVIL+ E +V LL KG I IA +L S Sbjct: 121 LSGSKHFRKEKTSQQFTLKELNNETQTISVILSPREMEVSFLLLKGSSIKDIAKVLNLSK 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +S K ++L + + AE+Y +N Q Sbjct: 181 TAVSTYKIRLFKKLGVKNIAELYNLLNHKQ 210 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 12/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ PV++ GL + + P+ + ++ + L + + L + DL+ S Sbjct: 21 LLVDDHPVVRDGLAQRIA-LEPDLSVCAACESVSRALREVTVHHPDLAVVDLSLPSGHGL 79 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++Y E+ + + L+ + E + ++ +R + Sbjct: 80 D---LIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAAIRKVLS 136 Query: 128 H----AERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKS 181 + +SA L A + + + + L+ E +VL +G+G + IA L++S Sbjct: 137 GRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRLERS 196 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYA 206 KTI + +L I SN+E+ A Sbjct: 197 AKTIETYRQRLKEKLNIESNSELIA 221 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 109 bits (272), Expect = 9e-23, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ +M++GL+ +M + + E++ A + + + Q R +V+ D++ Sbjct: 7 LIVDDHTLMRSGLR-LMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP---EM 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E +L++ ++ + + E + + L + VR+ + Sbjct: 63 SGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYS 122 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI---LTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 I +T + E + + L+ E+KVL L+ G+ +IA L S KT Sbjct: 123 GEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKT 182 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + K M +L +++ + Sbjct: 183 VETYKYRIMEKLNCKKRSDLVKF 205 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 109 bits (272), Expect = 9e-23, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 3/196 (1%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +++ +++ GL+ V+ P+ E++ AS+ E L ++ +V+ DL + Sbjct: 23 VLVDDHAILRQGLRSVLERE-PDLEVVGEASSMQEALAVVGDVAPDVVLMDLKLSAASDY 81 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L + + + + + V + + LV+ +R+ + Sbjct: 82 EGLALCAQLSAADGTMGLLVLTTFLDEQLVVRAIHAGARGYVVKDVDTTELVRAIRAVSR 141 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + S + + + LT E +VL+LL KG +I L S T+ Sbjct: 142 GESAFDSRSASAVIRSLNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFISATTVKF 201 Query: 188 QKNSAMRRLAIHSNAE 203 ++ MR+L + AE Sbjct: 202 HVSNIMRKLDVGRRAE 217 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 17/207 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +++AG+K +++ Y + + A + + L L + LVI D++ Sbjct: 1 MIVDDHLLIRAGIKLLLKNT-SAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPG---M 56 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + Y + + + + + L L ++ + Sbjct: 57 GGLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQ 116 Query: 128 HAERISA--------MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +S ++ PA D +LT ER+V L G+ I +IA L Sbjct: 117 GRRYLSPNAQQSLMDIMFRPAEEAADDPRS---VLTAREREVFDELIHGYTITEIAEQLH 173 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYA 206 S KT+ K +L +E+ Sbjct: 174 LSVKTVDTHKKHIYEKLHCSRRSELVT 200 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 87/202 (43%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GLK+++ + E+++ A +AE + L + +V+ D++ R Sbjct: 10 VIADDHAILREGLKQILAET-EDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD---R 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + ++ + + + + A+ L LS + LV +R+ Sbjct: 66 SGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAK 125 Query: 128 HAERISAMLTSPAMTETHDFSYRSV--ILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + ISA + + + + L+ E + L ++ G +++IA L S KT+ Sbjct: 126 GKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTV 185 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S + + +L + NAE+ + Sbjct: 186 SMYRARLLEKLNLRHNAELTHY 207 >UniRef50_B1T1G9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T1G9_9BURK Length = 204 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 8/203 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ P +Q L ++ + +++ +AS E L L + + L+I D+ D Sbjct: 4 VIVDDHPTVQLALTSILERNV-NLKVVGTASDGGEGLRLCRELKPDLLIVDIDL---DGM 59 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + + + S A+ ++ E + +++ + Sbjct: 60 DGIDLIQRVRIKDATVKILVFSGYSAELFALRCHAAGANGYVNKSEDVTHVLSAANAVLA 119 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 L AM +L+ E VLR L KG +I L SNKTIS Sbjct: 120 GFHCFP--LDINAMASGSGPHAAFAMLSERELTVLRYLAKGLSNKEIGDSLSLSNKTIST 177 Query: 188 QKNSAMRRLAIHSNAEMYAWINS 210 K + + +L + ++ A+ + Sbjct: 178 HKANILAKLGFTNVVDLAAFAKA 200 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 7/207 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESED 65 N ++ V+++G +++ + +++ ++ L + + + D+A E Sbjct: 12 NVALVDDHIVVRSGFAQLLA-LENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE- 69 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S L Q + + + + L L+ E LV+ VR Sbjct: 70 --SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVV 127 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ + A A+ + LT ER++ LL G + IA L+ S+KT+ Sbjct: 128 SSGGIYLCADALH-AIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTV 186 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + + + +L S E+ + Q Sbjct: 187 HVHRANILSKLQCESTVELVHFALQHQ 213 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 10/207 (4%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL---LQLRRSGLVIADLAGES 63 K+ +++ PV+ +++ + + Y I+ + L L LR +VI D++ E Sbjct: 3 KSVLIVDDHPVVCEAIRKTLESQ--GYTIVGETADGISALNMILSLRP-DIVILDVSLE- 58 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + ++ + ++S + A+ L + +S EP+ L+K V Sbjct: 59 --KMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVD 116 Query: 124 SGNTHAERISAMLTS-PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + S LT E +VL+LL +G +IA L SN Sbjct: 117 TIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSN 176 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWIN 209 KT+S K + + +L + S ++ Sbjct: 177 KTVSGHKINILSKLGVTSVVDLVNIAR 203 >UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=Enterobacteriaceae RepID=EVGA_ECO57 Length = 204 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 8/204 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESED 65 N I+I P+ A ++ ++ + + EI++ + + ++ + +VI D+ + Sbjct: 2 NAIIIDDHPLAIAAIRNLLIKN--DIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVN 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 V E QY I + + +++ + +S E + N++ + + Sbjct: 60 GIQVLETLRK--RQYSGI-IIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAA 116 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 L + T D + L+ E V+R + G N IA + SNKT+ Sbjct: 117 KNGYCYFPFSLNRFVGSLTSD-QQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTV 175 Query: 186 SAQKNSAMRRLAIHSNAEMYAWIN 209 S K+ M +L S ++Y + Sbjct: 176 STYKSRLMEKLECKSLMDLYTFAQ 199 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 12/212 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 +++ P+ + GL ++ + +EI++ A+ L + R LV+ D+ Sbjct: 9 LLVDDHPLFRRGLSFLLAQEY-GFEIVAEATDGLEGVKLARFHRPDLVLLDVEMP---VM 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E ++ + + + + L + + LV+ +R Sbjct: 65 NGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVA 124 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + +S + + + + S LT ER VLR + G IA + S T+ A Sbjct: 125 GQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKA 184 Query: 188 QKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 + R+L I + + +A AREL L Sbjct: 185 HMQNIFRKLNIDNR------VRAAVYARELGL 210 >UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4UE15_YERAL Length = 215 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 81/207 (39%), Gaps = 10/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 N +++ PV + ++ ++ I+ A L+L + ++ D+ S + Sbjct: 9 NVLIVDDHPVARLAVRMLLEKD--NMSIVGEADDGLKALSLAKELCPDFIVVDIDIPSLN 66 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPI---ENLVKTV 122 + + L S+ E + + + +S + + ++ + Sbjct: 67 GIDLVKC---LRSRGYEGGILVLSGKDDEHYVKRCASAGADGFISKRNNLLGFTDAMRAI 123 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + G + R + + + + + + L+ E +VLR L KG + I+ ++ S+ Sbjct: 124 KGGYGYYPRDQSRKVAMSGSIEENGQSKISTLSDKELQVLRFLVKGIKVVDISVKMQISD 183 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWIN 209 KT+S K M +L + + E+Y + Sbjct: 184 KTVSTYKRRLMLKLELKNMVELYDFSQ 210 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 12/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +++ GLK ++ T + E++ + + + +V+ D+ D Sbjct: 8 LLVEDHTIVREGLKALL-TATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLDGV 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + + + + L + +LV +R Sbjct: 67 GATR---EIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAG 123 Query: 128 HAERISAMLT------SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 S + S + + LT ER+VL L+G+G +IA +L S Sbjct: 124 GNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYA 206 KTI + M +L +H+ A + Sbjct: 184 VKTIEGHRGRIMAKLGVHNVAGLVR 208 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 13/226 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 I++ +M G+ ++R P+ +++ A + E L++ +V+ADL+ Sbjct: 7 IIVDDHQLMLEGIASLLRAT-PDITLVAKAQSAKEAFELVKQHNPDIVVADLSMPGVTGL 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + R + + E + + E+LV + + Sbjct: 66 DLIQQIKDAGLLTR---IIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRVHE 122 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 +++ P + L+ E+ VL + G +I+ L S+KT+ Sbjct: 123 GENTLTSKGLPPY------EPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVET 176 Query: 188 QKNSAMRRLAIHSNAEMYA-WINSAQGARELNLPSVYGDAAEWNTA 232 ++ M++L + E+ + S G + P E +A Sbjct: 177 HRSRIMQKLNVTKATELVREAMRSGLGNFDTTPPFTIDPPPERGSA 222 >UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC Length = 212 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 82/200 (41%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 +++ +++ L ++ + + S A + + L LL+ +V+ D+ Sbjct: 5 MLVDDHTMVRKALAHLIGSEQ-GIGVTSEADSGEAALALLKTETVDVVLCDIHMPG---M 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + ++Y EI + + + + + A +L ++ P + L+ + + Sbjct: 61 GGLEAIRRIQARYPEIGLIAVTAEADAALARSVLEAGVHGYVTKDAPPQELITAIENARH 120 Query: 128 HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 IS+ + A+ + L+ E++VL ++ +G I+ L S KT+S Sbjct: 121 KIRFISSRIAQEIALQSMRKTADPFETLSGREQQVLMMILEGKSNQFISDALCVSPKTVS 180 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 K +L ++++ E+ Sbjct: 181 TYKVRLQEKLGVNNDIELLR 200 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 87/233 (37%), Gaps = 13/233 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +V P+++ GLK + P+ +++ A E L L+ +V+ DL D Sbjct: 8 LVADDHPIVRQGLKTFL-DIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSDGA 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 V L + + + S + + E + A L ++L + +RS Sbjct: 67 KV---LTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 + + LT ER+VL L+ G +IA L + KT+ Sbjct: 124 GQVIFAREAVTAMTA---PAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKT 180 Query: 188 QKNSAMRRLAI--HSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREM 238 +S R+L + + A +YA + G E L S A +A +R + Sbjct: 181 HLSSLFRKLGVADRTQAALYAVTHGMAGHTEGRLES--PPRAGRQSAVHKRRV 231 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 76/199 (38%), Gaps = 9/199 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 +++ P++ GLK ++ +++ +A+ E + L+ + D+ Sbjct: 6 LIVDDHPLVLEGLKSLLADA-EGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDISGI 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 +C + Q+ E+ + + + + + ++ + L E++++ + Sbjct: 65 DLC---KKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQA 121 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ LT E++VL L+ +G QIA L S T+++ Sbjct: 122 GGYFMNVQFDQVTPATAPKTVP---FLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNS 178 Query: 188 QKNSAMRRLAIHSNAEMYA 206 + + + + + + A + Sbjct: 179 HRQNLLIKFEVSNTASLIK 197 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 15/209 (7%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS---GLVIADLAGESED 65 I+ +++ GLK ++ + I++ A+ D TLL L RS L+I DL Sbjct: 7 AIIADDHAIVREGLK-LLISAMTNVSIVAEAANGD-TLLDLVRSTRADLLILDLGMPG-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL---VKTV 122 + + + + + + + + L L+ E L + V Sbjct: 63 -VAGIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTAIDAV 121 Query: 123 RSGNTH-AERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLL 178 +SG T+ A+ I + P + + LTL ER+VL L +G Q+A L Sbjct: 122 KSGKTYLAKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVLLLSAQGQTSRQMAERL 181 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S T + + MR+L +HS AE+ A+ Sbjct: 182 GISPLTARKHRENLMRKLNLHSTAEVTAY 210 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 79/205 (38%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ G+ +V+ T ++ E L LL + + LVI D++ Sbjct: 7 VIADDHAMLRRGICQVIET-QEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP---KM 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E + + Y I +F+ L + ++ + + Sbjct: 63 SGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTILE 122 Query: 128 HAERISAMLTSPAMTETHDF-----SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S++ T D S+ L+ E +VL LL +G +IA +L S Sbjct: 123 GKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCIST 182 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 +T+ + S M+RL + + A++ + Sbjct: 183 RTVEHHRASIMKRLDLRTLADLIKY 207 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 6/205 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + GL+ ++ T + +I + + ++ + L++ D+ + Sbjct: 11 LIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLILLDINLPHRNGV 70 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + L ++ + V + S+ EL A L + L+ + S + Sbjct: 71 DIAR---QLRREFPHVGVVIITMYSYQKLTEELRAVGVAGYLLKSASPDRLMTCLTSVVS 127 Query: 128 HAERISAMLTSPAMTETH-DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + A+ D + LT E +++RL+ G +QIA L S +TI Sbjct: 128 GKPFFDQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLFLSAETIK 187 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSA 211 + + +L I+S A + + N Sbjct: 188 THRKNIYFKLGINSVAALILFANEQ 212 >UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY1_BRAJA Length = 211 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 85/205 (41%), Gaps = 8/205 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESE 64 K ++ V+++GL+ ++ T + + A+ + + L S +VI D + Sbjct: 2 KRILIADDHAVVRSGLRAIVET-QSNWIVAGEATNGEQAVGLAVETMSDIVIVDYSMPLM 60 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + V +L + + + E ++ L + ++L+ + + Sbjct: 61 NGLEVSRRLKALDLR---TEVLILTMHEDEELLSEAVLAGVRGFLFKSDAKKHLISAIEA 117 Query: 125 GNTHAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 ++ L + + + ++LT E+ V++L+ +G ++ +LK S Sbjct: 118 LLDGRPYFTSALVEKLLHDYQLNKHGRSDMLLTSREQSVVQLIAEGHTNRSMSVILKLSV 177 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KT+ + SAMR+L + S AE+ + Sbjct: 178 KTVETHRASAMRKLGMSSTAELVRY 202 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 80/200 (40%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 ++I +++ G++ ++ I+ AS + L R +VI D + Sbjct: 28 LLIEDHVLIRRGMRLMLEQI-KGIRIVGEASTGEEGLALRREKEPGVVILDFQLPDTN-- 84 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L+ + EI + + + + LL ++ L + +R+ ++ Sbjct: 85 -GLELARRLLRRDPEIKILVVTAMEGELLPMRLLEVGVRGFITKSSDSAELERAIRAVHS 143 Query: 128 HAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 I + + S A+++T L+ + +VL LL KG IA L + KT++ Sbjct: 144 GQRYIGSAIASRLALSKTTAAKSPFDQLSNRQMEVLLLLAKGMNAESIAKQLHITAKTVN 203 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 + + +L + ++ E+ Sbjct: 204 SHRYRMFEKLGVKNDVELIK 223 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR---SGLVIADLAGESEDP 66 +++ +++ G+ +M + E+I+ A + L L++ +V+ D+ ++ Sbjct: 9 MLVDDHAMLRHGM-AMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTLKT--- 64 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 S E S+ + + +F+ A L + EP E L+ + Sbjct: 65 VSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAIHEVL 124 Query: 127 THAERISAM----LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S L + + LT SE +VL L+G+G +IA LL +S Sbjct: 125 KGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLLCRSI 184 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KTI + + +L + A++ + Sbjct: 185 KTIETHRFNIRVKLHLKDGADLIRY 209 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 78/203 (38%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVM--RTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESED 65 +++ +++ G++ ++ R +++ A + + L++ +R +V+ D+ Sbjct: 5 LLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMPG-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 ++ + + + + +L + L+ IE ++ ++ Sbjct: 63 -IGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGA 121 Query: 126 NTHAERISAMLTS--PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 IS + + L+ ER++L ++ +G IA+ L S K Sbjct: 122 MQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPK 181 Query: 184 TISAQKNSAMRRLAIHSNAEMYA 206 T+S K M +L I ++ ++ Sbjct: 182 TVSTYKCRVMGKLGISNDMQLVT 204 >UniRef50_C7PRP4 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRP4_CHIPD Length = 208 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 6/198 (3%) Query: 12 ISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPRSV 69 ++ P++ GL + I + L L ++I D D ++ Sbjct: 7 VNNHPLILEGLHSFF-DDENDILIAGHTRSGYGCLKFLMHNSVDIIIIDTCLPDIDSAAL 65 Query: 70 CEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHA 129 C ++ +Y + + + LL + + + L+ V S Sbjct: 66 CA---NIRMEYPTVMVLVLSFLKEERYIDRLLQSGAGGYVLNTADKDELLFAVHSVYAGG 122 Query: 130 ERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQK 189 +S ++ +E LT E++VL L+ +G +IA L S T+++ + Sbjct: 123 VYLSPVIKQAMSSERVGLQKNFPPLTRREKEVLSLISEGNTNAEIAEKLFISADTVNSHR 182 Query: 190 NSAMRRLAIHSNAEMYAW 207 + +L + + A + + Sbjct: 183 KKLLAKLEVKNTAMLIKY 200 >UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U6_9BACT Length = 217 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 13/206 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 ++I + AGL E+ + P+ +++ SA + L +R R + + D+ S Sbjct: 5 VLIDDHRMFIAGLMEIFASR-PDLQVVGSAPDGESGLAVVREQRPDVAVLDMTMPS---I 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L+ + E + + + ELL L + L+ VR+ Sbjct: 61 GGVECARRLVESFPETKILALSMHNDLRFISELLRIGAKGYLLKDCATDELLTAVRTVAE 120 Query: 128 HAERISAMLTSPAM-------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 ++ + + HD RS++L+ E+ VL L+ +G I L Sbjct: 121 GRLYLAGGVVQLLVEDYLRLKRAVHDGPARSMVLSEREKSVLALMAQGLTSKAIGDELGI 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYA 206 S T+ + M +L +S AE+ Sbjct: 181 SKNTVDTHRRRMMDKLGCNSVAELLR 206 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 9/199 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 +V+ PV++ GL ++ + ++ A D + Q R + +V+ DLA D Sbjct: 5 LVVDDHPVVREGLVAILEA-QEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD-- 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + V + + + ++ + + L P E++ + VR Sbjct: 62 -GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI---LTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + ++ + D + LT E VL L+ +G +IA L + +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 185 ISAQKNSAMRRLAIHSNAE 203 + N+ R+L + E Sbjct: 181 VKFHANAIYRKLDVSGRTE 199 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 75/205 (36%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++AG++ ++ P I+ A E +TL+ + I D+ + Sbjct: 8 VLADDHALVRAGIRTLLEK-LPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLNGF 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + + + ++ L L L + + Sbjct: 67 DATA---RIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 128 HAERISAMLTSPAMT-----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S ++ + E + + LT R++++L+ +G +IA LL S Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 KTI + M RL +H A + + Sbjct: 184 KTIETHRMHLMARLGLHDVAGVVRY 208 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 10/204 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 ++ +++ GL+ V+ P E++ AS L +V+ D+ E Sbjct: 14 LIADDHALVREGLRYVLDAD-PGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE--- 69 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + L + + + E + T L E L +R+ + Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 128 HAERISA----MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 S LTS + + + +LT ER VL + +G IA+ L S + Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 T+ A + S MR+L IHS A + + Sbjct: 190 TVEAHRESLMRKLQIHSVAGLTRF 213 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 8/200 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESEDPR 67 ++I P++ GLK V+ T F E+ +A L R+ +V+ D+ Sbjct: 10 LLIDNHPLVLDGLKAVLET-FDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLSGI 68 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E +++ EI V + +M A + + +V + + Sbjct: 69 DAIEL---FRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVAD 125 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 S+ + M E + LT E +L L+ G +IA +L S+ T Sbjct: 126 GGTYFSSGVFDALMGERAEEGSDP--LTPREHDILGLIVAGRSNREIAEVLGISSATAET 183 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + + ++L I + A + + Sbjct: 184 HRKNLKKKLGIATTAGLIRY 203 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 76/199 (38%), Gaps = 8/199 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +++ G++ ++ + ++++ A + + L ++ +V+ D+ Sbjct: 11 LIVDDHALVRMGIRRLLED-MSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPG---I 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E L I + + + +L L+ E + +R Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 128 HAERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +SA + + S +L+ E +V+ ++ G + IA L S+KTI Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 186 SAQKNSAMRRLAIHSNAEM 204 + + +L I ++ E+ Sbjct: 187 NGYRYRMFEKLGIKNDVEL 205 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 75/220 (34%), Gaps = 15/220 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDPR 67 + + PV+ G +M P+ +I A+ + L + LV+ DL R Sbjct: 19 LFVDDHPVVLDGY-SLMLKSQPDLDICGLATNAGDAVQLFEKEHPDLVVMDLNLPG---R 74 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + L++ + A L ++ L+ +R Sbjct: 75 SGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRVLG 134 Query: 128 HAERISAMLTSPAMTETHDFSYRS-----VILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S L + R L+ E +V L G+G +I + L S Sbjct: 135 GNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGAKLNLSP 194 Query: 183 KTISAQKNSAMRRLAIHSNAEMY----AWINSAQGARELN 218 KT+S ++ +++ ++AEM W+ S E N Sbjct: 195 KTVSVHRDHIKQKMEFGTSAEMIRQAVRWVESQPVKGEQN 234 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 18/202 (8%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPRS 68 +I +++ G++ ++ P ++++ A AE LLQ +++ D+ + Sbjct: 10 LIDDHALVREGIRALLE-VLPHFQVVGEAGSGAEAFDLLQRTPVDILLMDVGLRDIN--- 65 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEP----IENLVKTVRS 124 E L +Y I + + L + + P + + Sbjct: 66 GLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIAAG 125 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 G+ ++ I+ L PA +E LT ER+VL +L +G +A L+ S +T Sbjct: 126 GSFYSGDIARKLVKPAPSEDE--------LTPREREVLLMLAQGLNNKVMARTLQISVRT 177 Query: 185 ISAQKNSAMRRLAIHSNAEMYA 206 + + S R+LAI A++ Sbjct: 178 VETHRLSIRRKLAIDKPADLLK 199 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 11/211 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 ++ V++ GL+ T + E++ A+ L ++ + LV+ DL+ Sbjct: 4 VIADDHHVVRKGLRFFFAT-QDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMP---EM 59 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT--VRSG 125 + I Q+ + + + + S S + L E LVKT V G Sbjct: 60 DGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVHGG 119 Query: 126 NTH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + I + + + + LT E+ VL + G +IA+ L S KT Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 185 ISAQKNSAMRRLAI--HSNAEMYAWINSAQG 213 + ++ + +L + + A ++A + G Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVKYNLNG 210 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 80/218 (36%), Gaps = 11/218 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESEDPR 67 I+ + + G++ ++ + +++ A + + +V+ DL+ Sbjct: 6 ILADDHVMFREGMRALLERE-EDMVVVAEAGDGVSVVEKTLENMPDVVVLDLSMPG---M 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + + I + + S +E L + + + LV VR Sbjct: 62 NGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCVFK 121 Query: 128 HAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S L+ ++ D LT E + RLL G +I LK S+KT+ Sbjct: 122 DTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSKTV 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVY 223 + M++L I + A++ +N A + P + Sbjct: 182 ETYRLKVMKKLNISNIAQL---VNHAVQEGIVGRPESF 216 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 11/204 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESEDPRS 68 +I V++ GL V+ + E+ SA + L +L ++I DL+ + D Sbjct: 8 IIDDHAVVREGLAMVINQE-ADMEVCGSADDGPVALQKLFNIEPDIIIVDLSLTTSD--- 63 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E ++ ++Y I + + R A + + + E +++ +R Sbjct: 64 GLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEALRKIIKG 123 Query: 129 AERISAMLTSPAMTETH-----DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 S +T + + + LT E +V +++G G+ QIA+ L S K Sbjct: 124 KIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATKLNLSVK 183 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 TI A + S +L + S E+ + Sbjct: 184 TIDAFRESMKHKLGLKSAPELSQY 207 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 23/217 (10%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR-------RSGLVIADLAGE 62 ++ +++ G+K+++ + + A + +R +V+ D+A Sbjct: 5 VICDDHVIVRQGIKQILADA-GDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIAMP 63 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 R + SL +++ + + + + AV L A L+ E ++ + Sbjct: 64 ---QRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 123 RSGNTH------------AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWG 170 R A + A + S D + L+ E +V LL G Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 171 INQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 + +IA L S+ T+S + + + + ++ E+ + Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALY 217 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 107 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 9/195 (4%) Query: 18 MQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYS 75 M++GLK +++ P +++ AS E L L + R ++I D++ + Sbjct: 1 MRSGLKLLLQKR-PSLKVVGEASDGLEALRLYDILRPDILILDISLPR---LDGIQVLTE 56 Query: 76 LISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAM 135 + +Y + + + ++ + + E L + S + Sbjct: 57 IKLRYEQAKVIVLTMHEDEDYVTLIMNAGASGYVPKAAVDEELYTAIDSVMDGYLYLRPK 116 Query: 136 LTSP---AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSA 192 S + + VIL+ ER+VL+ L KG+ +++IA L S KT+ K Sbjct: 117 EISTMLKRLQNETESRNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRM 176 Query: 193 MRRLAIHSNAEMYAW 207 + +L + +E+ + Sbjct: 177 LNKLNLSKKSELVQY 191 >UniRef50_C0BG71 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG71_9BACT Length = 209 Score = 106 bits (265), Expect = 5e-22, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 78/201 (38%), Gaps = 8/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ PV+Q G K +++ + S + LQ +VI ++ + Sbjct: 5 VLLDPHPVVQKGFKTFF-NKKDHIKVLGTFSKTQQLFDFLQKNTIDIVIIEMELKD---V 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + L Y I + S + +L LS E ++ + + Sbjct: 61 SAVQTVRKLKLLYPNISTLIFTSLRESVYGISILKAGAKGFLSKEISRETMIDAIEKVHH 120 Query: 128 HAERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 I++ + R L+ E +VL+ L +G +IA+ LK KT+ Sbjct: 121 KGYHITSNFANQINKNVDLHRPRNAYGTLSSREIEVLKYLIEGKRNVEIAATLKIHQKTV 180 Query: 186 SAQKNSAMRRLAIHSNAEMYA 206 + K+ M++L + ++A++Y Sbjct: 181 NTYKSRLMKKLEVTNSADLYQ 201 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 78/202 (38%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ V++ G+++ + T P+ ++ A +E +L+ +++ DL R Sbjct: 5 VLCDDHAVLRRGIRDTL-TEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPG---R 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E SL I + + A+ L + L++ VR+ Sbjct: 61 SGLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMK 120 Query: 128 HAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + ++ + + L+ E + L + G ++ IA L S KT+ Sbjct: 121 GRKYLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKTV 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 S ++ + +L + +NAE+ + Sbjct: 181 SVYRSRVLEKLKLSNNAELTVY 202 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 12/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + + GL +M + P+ ++ A+ E L LL + +V+ DL Sbjct: 8 VIADDHEIFRDGL-ALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKMPL---M 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 +L+ + +I + + VE+L L + +++ + S Sbjct: 64 DGITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEAINSVYE 123 Query: 128 ----HAERISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + + SA L + + +V T E++++RL+ + + +I + S Sbjct: 124 DHIFYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIGDKIFLS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 +T+ + + ++ + + A + + Sbjct: 184 KRTVEGHRTRILEKMNVKNTAGVVVF 209 >UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=Gammaproteobacteria RepID=Q3K943_PSEPF Length = 208 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 79/201 (39%), Gaps = 9/201 (4%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPRS 68 ++ PV++ ++ ++ Y+++ + +R L+I D++ D Sbjct: 6 IVDDHPVIRLAVRMLLE--HEGYKVVGETDNGVDAMQMVRECMPDLIILDISIPKLDGLE 63 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 V + ++ S + + + ++ + + + + E + LV +++ + Sbjct: 64 VLARFNAMSSPF---KTLVLTAQCPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLSG 120 Query: 129 AERISAMLTSPAMTETHDFSYRSVILT--LSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + +P + ++ + + E VL+L +G +IA + SNKT+S Sbjct: 121 YNYFPSQALNPVRHDDVRYAELELFKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKTVS 180 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 K M++L S E+ Sbjct: 181 TYKKRLMQKLKAKSLVELIEM 201 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 90/225 (40%), Gaps = 19/225 (8%) Query: 5 CCK-----NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIA 57 CK N ++ +++ GLK+++ P+ ++I A+ + +L+ ++ +V+ Sbjct: 4 RCKSVKKINVLIADDHALVRQGLKQIIE-LEPDIKVIGLAADGEEAVLKTQQLSPDVVLL 62 Query: 58 DLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIEN 117 D++ ++ + S I + + E + + E+ Sbjct: 63 DISMPKQNGIQTLRRLKDMDST---IKIIMLTFHEDREYLFETINLGANGYVLKDAESES 119 Query: 118 LVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVI------LTLSERKVLRLLGKGWGI 171 L+K +R I L + + E + +S LT E +VL LL +G Sbjct: 120 LIKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINN 179 Query: 172 NQIASLLKKSNKTISAQKNSAMRRLAI--HSNAEMYAWINSAQGA 214 +I L S KT+ ++ +++ + + A +YA+ ++ + Sbjct: 180 KEIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNIKKI 224 >UniRef50_A3XI64 DNA-binding response regulator, LuxR family protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XI64_9FLAO Length = 212 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 7/206 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVC 70 V P++ GL +++ E + S + + L+ + LVI ++ + Sbjct: 6 VADHHPIIVDGLTHILKDTPHEIIDVVSDGKDLIPSLEEQVPDLVIMEIDMPNLQ---GL 62 Query: 71 EHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAE 130 L + I + + A+ + + + + + K V Sbjct: 63 SAIKELRKLFPGIKIMVFSTHPEGMYALSAIKAGAMGYIGKIAETQTVHKAVVQVARGGI 122 Query: 131 RIS----AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 ++ ML++ + + +YR L+ E +VL +L G IA L + KT+S Sbjct: 123 YLNNNLVEMLSNTDSAQNNSLAYRYKKLSTRETEVLNMLSSGKRNKDIAESLDINEKTVS 182 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQ 212 K +++L S AE+ Q Sbjct: 183 TYKTRLLKKLDAGSLAELIQQARLLQ 208 >UniRef50_C4ZL17 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZL17_THASP Length = 213 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 9/203 (4%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 +++ PVM+ G+++++ +P+ +I AS L Q+R L + DL+ Sbjct: 4 LIVDDHPVMRFGVRQLVTQRWPD-AVIGEASCLAQALEQVRAAEWELAVLDLSMPDT--- 59 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E L + + + A L A L+ LV + + Sbjct: 60 SGLEGLVRLHRAAPLTRLLVLSMHDEAAYAARALQLGAAGYLTKEHATTELVAAIERVRS 119 Query: 128 HAERISAML---TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 IS+ L + ++ L+ E +VL L+ G G ++IA ++ S KT Sbjct: 120 GQRYISSDLAARLADLLSGEAPARAPHETLSAQEYRVLLLIAAGHGASEIAEIMHLSVKT 179 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + ++ + + + + AEM + Sbjct: 180 VGTYRSRIIDKTGLANTAEMARY 202 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 69/196 (35%), Gaps = 6/196 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ ++ GL+ ++ + ++++A+ L +++ R +V+ DLA + R Sbjct: 11 VLADDHELVLEGLRGLLERE-SDMIVVATATDGESLLAIIERERPDVVVMDLAMPT---R 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + V + + +P + T+R+ Sbjct: 67 DGLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAH 126 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ A LT ER VLRLL +G QIA L T+ Sbjct: 127 GQIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKY 186 Query: 188 QKNSAMRRLAIHSNAE 203 + ++L + + E Sbjct: 187 HLQNIFQKLGVTNRTE 202 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 106 bits (264), Expect = 8e-22, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 86/216 (39%), Gaps = 14/216 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 +++ +++ GL+ ++ + + + +I+ + + +L+ + +V+ DL+ + Sbjct: 5 LLVDDHTMIRKGLRVLLES-YSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG--L 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + V + E + + E L + + Sbjct: 62 DGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVYR 121 Query: 128 ----HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + +S + + + D +LTL E++++RL+ G+ ++A L S K Sbjct: 122 GKCFYKTSVSQEIINLWLRS--DAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 T+ K + M++L + S ++ + A R L+L Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQY---AIKNRYLDL 212 >UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY0_BRAJA Length = 225 Score = 106 bits (264), Expect = 8e-22, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 8/209 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESE 64 K ++ ++ GL+ V+ ++E+++ A+ LT R + I D + Sbjct: 18 KRFLIADDHEAVRLGLRAVLEQR-ADWEVVAEANDGSKALTAAIESRPHVAIVDFSM--- 73 Query: 65 DPRSVCEHYYSLISQYR-EIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 PR I Y + + A + L+ + +L+ V Sbjct: 74 -PRMTGVEVARRIRDYPLQTEVLIFTVHKSGLLAQQAFEAGARAFLTKSDANRSLLAAVD 132 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + H S + + R LT E+ V++L+ +G+ I+++L S K Sbjct: 133 ALLVHKRFCSESCRNELDHGAGGEADRGRGLTPREQLVVKLVAEGYSNKGISAILNLSVK 192 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T A + +AMR+L ++S A + + AQ Sbjct: 193 TTEAHRAAAMRKLDVNSTAGLVRYAVRAQ 221 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 105 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 74/203 (36%), Gaps = 6/203 (2%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPRS 68 +I P++ GLK ++ + + D L L +++ D+ + Sbjct: 5 IIDDHPIVLQGLKNLLESR-EGIRVTGIFDQADSALAALDSHIPEVMLMDINLPDISGVT 63 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 +C+ + EI V + + S + +L + + +++V +++ Sbjct: 64 LCQQVKQ---AHPEIRVVALSIHNERSVIMSMLQSGASGYVLKNAIGDDIVAALQAAMEG 120 Query: 129 AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQ 188 + A LT E+++L L+G+G+ QIA+ L S T+ + Sbjct: 121 QIYLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHTVESH 180 Query: 189 KNSAMRRLAIHSNAEMYAWINSA 211 + + + + + A + Sbjct: 181 RKNLKEKFGVPNTATVVRMAAEL 203 >UniRef50_A4SZV7 Two component transcriptional regulator, LuxR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZV7_POLSQ Length = 207 Score = 105 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESE 64 K +++ P M LK +++ +EI A + L ++ +VI DL Sbjct: 3 KRVMLVDDHPAMLMALKSMLQDQLL-FEIAGQAQNGEECLRSIKEVNPNMVILDLDMPKT 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 D V + Y +I + + S + ++ + ++ + Sbjct: 62 DGFDVIRRIGLM---YPDIRMLVLSSLDEAVYGGRVRSLGAHGFVNKTAGADVILAACVA 118 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + + +D + +++ E +V++ LGKG QI+ LL SNKT Sbjct: 119 ISQGYNFFTHGKNGNSSLTDND---KLALISDRELQVMKYLGKGNTNQQISDLLHISNKT 175 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 ++ K +L I++ A++ + Sbjct: 176 VATYKTRVFDKLGINNIADLILF 198 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 84/216 (38%), Gaps = 14/216 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGE-SEDP 66 ++ +++ GLK ++++ ++ A + + RR + + DL+ Sbjct: 8 VIADDHALVREGLKTILKS-QSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKSGV 66 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 +++ E +++ + + + L + + + LV + + Sbjct: 67 QAIQELSGEGKTKF-----LALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVM 121 Query: 127 THAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 ++ +++ + + LT ER+VL+ + G+ +IA LL S Sbjct: 122 QGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVIS 181 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAREL 217 KT+ +++ M++L + S AE+ A+ + Sbjct: 182 VKTVEKHRSNFMKKLGLRSKAELKAYSEELKKKGIY 217 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 78/201 (38%), Gaps = 6/201 (2%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEII-SSASAEDLTLLQLRRSGLVIADLAGESEDPRS 68 +++ + + GLKE++ E + + E + +L +V D+A + Sbjct: 8 LIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN--- 64 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E + Y E + + A+ L C + L+ E L+K V Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 129 AERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + + + + + + L+ E +V ++ KG + +I+ L S KT+S Sbjct: 125 GKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVS 184 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + + +L + +NAE+ + Sbjct: 185 TYRARILEKLGLENNAEIINY 205 >UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ83_ACIBL Length = 233 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 80/202 (39%), Gaps = 8/202 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSV 69 ++ ++ K+++ T + I + A ++L+ ++IAD+ + Sbjct: 27 LLADDHNLVAELCKKLLETEYEVVGIATDGRALVRAAVELKP-DVIIADVGMPLLNGLDA 85 Query: 70 CEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHA 129 + + + +F+ A E + L +V +VR Sbjct: 86 AQQVKQ---KLPTVKIIFLTMNPDPDIAAEAFRRGASAYLVKTSAASEVVASVREVLRGK 142 Query: 130 ERISA----MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S + ++ + + LT +R+VL+LL +G G+ ++A++L + +T+ Sbjct: 143 TYVSPTIPREMIDLSLWQHKKLVDETHKLTDRQREVLQLLAEGKGMKEVAAILNMTTRTV 202 Query: 186 SAQKNSAMRRLAIHSNAEMYAW 207 + K M L +NA++ + Sbjct: 203 AFHKYRIMEVLGTKNNADLVKY 224 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 14/207 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIIS--SASAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GL++++ + P ++ + + + +V+ D+ + Sbjct: 8 LIADDHILIREGLRKIL-SIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMNGI 66 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 C L I + + EL+ + + + L+KT+ Sbjct: 67 EACRQIKKLN---PNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQ 123 Query: 128 HAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 I LT+ + E S + + LT E +VL+ + KG IA+ L S Sbjct: 124 GESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYIS 183 Query: 182 NKTISAQKNSAMRRLAI--HSNAEMYA 206 KT+ + +++ + + A +YA Sbjct: 184 EKTVKNHLTNIFQKIGVADRTQAALYA 210 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 87/235 (37%), Gaps = 19/235 (8%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 N +++ P+ ++G++ + + P++ I+ A +E L L +++ DL+ Sbjct: 5 NILIVDDHPLFRSGIRWSLEQN-PQFVIVGEAADGSEALRLADELSPDVILVDLSLPG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E +L + + + + Q + + + E L+ + Sbjct: 62 -MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 126 NTHAERISAM-LTSPAMTETHDFSYRSVI------------LTLSERKVLRLLGKGWGIN 172 I+ M L+ P + +R + LT E ++L + +G+ Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAA 227 +IA L S++T+ S +R+LA++ + + + + A Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLEDTEDSLPGPA 235 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 10/196 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESEDPR 67 +++ P+MQ GL++ + H P +EII A + Q + LV+ D+ Sbjct: 41 LIVEDDPLMQLGLEQALSEH-PNFEIIGQAEDGYTGVQQALELKPDLVVMDIGLPR---L 96 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + Q IH V + S + ++ V L +E L+ + + Sbjct: 97 DGIAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQD 156 Query: 128 HAERISAMLTSPAMTETHDFSYRS----VILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 A + + + + +L+ E +VL+L+ +G N+IA L S Sbjct: 157 GATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTN 216 Query: 184 TISAQKNSAMRRLAIH 199 TI M +LA+ Sbjct: 217 TIKTHVRGIMNKLAVD 232 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 77/200 (38%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 ++ V+++GL+ V+ P+ +++ A ++ +++ DL E Sbjct: 17 VIADDHRVVRSGLRMVL-DAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ-- 73 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 L+++ E V + + + A E L + + LV+ VR Sbjct: 74 -SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLARE 132 Query: 128 HAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISA 187 ++ L M S LT E +VLRL+ G +IA L S +T+ + Sbjct: 133 GRTYLNPEL-GARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVES 191 Query: 188 QKNSAMRRLAIHSNAEMYAW 207 + +++ S AE+ + Sbjct: 192 HRAHIQQKVRRSSRAELVRY 211 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 15/203 (7%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPRS 68 ++ P++Q GLK + + + + I+ S L + +++ D++ + + Sbjct: 13 IVDDHPMVQGGLKACL-SFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMNGID 71 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSD---VEPIENLVKTVRSG 125 E Q E + + S + L E I +K V +G Sbjct: 72 ATEIITE---QLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 126 NTH-AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 TH + I+ +L + + S LT E+ VL L KG +IA +L S +T Sbjct: 129 KTHFSSSIAKLLIDNPVN-----TNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRT 183 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + A + + +L IHS A++ ++ Sbjct: 184 VEAHRRNMKTKLGIHSLAKLISY 206 >UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS Length = 212 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 81/200 (40%), Gaps = 7/200 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEII--SSASAEDLTLLQLRRSGLVIADLAGESEDPR 67 +++ ++ G+ + +P ++I+ E ++I DL+ + Sbjct: 7 LLVDDHEIIINGIMNALL-PWPHFKIVEHVKNGLEVYNACCAYEPDILILDLSLPGINGL 65 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + L ++ ++ + + ++ L + + L+ +++ Sbjct: 66 DI---IPQLHQRWSAMNILVYTAYQQEYMTIKTLAAGANGYVLKSSSQQVLLAALQTVAV 122 Query: 128 HAERISAMLTSPAM-TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + I L A+ E + + +LTL ER+VL+L+ +G+ + I+ L S KT+ Sbjct: 123 NKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKLIDEGYTNHGISEKLHISIKTVE 182 Query: 187 AQKNSAMRRLAIHSNAEMYA 206 + + MR+L +H E+ Sbjct: 183 THRMNMMRKLQVHKVTELLN 202 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 8/201 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 ++ +++ GL ++ + I+ A + R +V+ DL+ D Sbjct: 6 LIAEDQQLVRQGLVALLA--VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELDGV 63 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + + + + E L L+ + + Sbjct: 64 EATRRIKQVA---PQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCA 120 Query: 128 HAERISAMLTSPAMTETHDFS-YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + L+ + E + S LT ER+VL+L+ +G +IA L + KT+ Sbjct: 121 GKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 187 AQKNSAMRRLAIHSNAEMYAW 207 + M++L +H++AE+ A+ Sbjct: 181 THRTKIMQKLDLHNSAELAAY 201 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 84/212 (39%), Gaps = 17/212 (8%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESED 65 N +++ +++ G+K ++ + I+ A+ + ++ + +VI D+ Sbjct: 5 NILLVDDHTIVRDGIKATLKD-QKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP--- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + +Y + + + + ++ + L + +K + + Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 126 NTHAER----ISAMLTSPAMTE-------THDFSYRSVILTLSERKVLRLLGKGWGINQI 174 + IS++L S +++ +S LT E+ +L+++ G +I Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYA 206 A L S +TI + + M++L + + E+ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVR 212 >UniRef50_B8IGH6 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGH6_METNO Length = 232 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 13/226 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGES 63 C +V P++ G++ ++R H P+ II A A+ L L + + I D+A Sbjct: 8 CTRVLVADAHPLLLRGVQHLLR-HEPDLSIIGEAISGAQALRLASDLQPDIAILDVALPG 66 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + + L + + + A L + E L+ +R Sbjct: 67 LHGSEIRQ---RLAERAAGTRVIILSGTEEPICAQRALAAGVCGYVLKRSAPETLLHAIR 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYR-------SVILTLSERKVLRLLGKGWGINQIAS 176 + T + + + + R S LT ER+V+RL+ G+ +IA Sbjct: 124 AVRTGGLYLDPTIAGQLVPAGGPPATRTSGIDGFSASLTNREREVIRLIALGFTNKEIAG 183 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSV 222 L + K+I + A +L I + A++ + + R + SV Sbjct: 184 KLGITAKSIETYRTRASEKLDIRTRAKIVQYAMAQGWFRTESGSSV 229 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 10/194 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL---LQLRRSGLVIADLAGESEDP 66 +++ P+++ GL+ ++ E++ A + + L L +V+ DL Sbjct: 22 LLVDDHPLLRHGLRALLEQV-GGAEVVGEAGDGEEAIALVLSLNP-DVVVMDLVMPGVT- 78 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E +LI + ++ + + + L + + + VR+ Sbjct: 79 --GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 127 THAERISAMLTSP--AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + T S LT ER++L LL G +IA L S KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 185 ISAQKNSAMRRLAI 198 + S +L + Sbjct: 197 VKNHLTSIFAKLQV 210 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGE 62 C I++ +++AGL +++T F +++ AS L L R LV+ DL+ Sbjct: 10 CAVRVIIVDDHTLVRAGLSRLLQT-FAGIDVVGEASNAQQALDMTSLHRPDLVLMDLSLP 68 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 RS + ++ H V M + L + L + Sbjct: 69 G---RSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELAL 125 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKK 180 R+ +S ++S + I L+ +R++LR +G+G +IA+ L Sbjct: 126 RAAAAGQVFLSPQISSKMIAPMLGREKPVGIAALSPRQREILREIGRGQSNKEIAADLGI 185 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMY 205 S KT+ + M L ++ Sbjct: 186 SVKTVETHRARMMESLGCRRANDLV 210 >UniRef50_C1ZGK9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGK9_PLALI Length = 217 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 11/204 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPRS 68 +I +++ GLK ++ + +++ A+ L + R+ +V+ DL+ + Sbjct: 7 LIEDHELVRTGLKLLIER-QKDLQVVGEAADGAEGLKIIARTLPDVVVLDLSIPHLN--- 62 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E L Q R + + + A L+ + L+ +R Sbjct: 63 GFELLEQLQHQKRPPKVLVVTANEDLDSLQRSWNLGAAGHLAKRSAADELIVAIRKIAAG 122 Query: 129 -----AERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 ++ S + + ET + L+ E +VL+L+ G +IA+ L S K Sbjct: 123 EKVFPSKEESKAVKTLGFNETSGRLTGAESLSERETEVLKLIAAGHMAKEIAAKLDISLK 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAW 207 T+ K+ M++L++ E+ + Sbjct: 183 TVETYKSRGMQKLSLRGRTELVRF 206 >UniRef50_Q31FU6 Two component transcriptional regulator, LuxR family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FU6_THICR Length = 232 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 94/215 (43%), Gaps = 19/215 (8%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESEDPR 67 ++ +++AG K ++ + ++I+ A + L+L++ ++ ++I DL+ Sbjct: 9 LLAEDHDLVRAGFKSILDSD-GTVKVIAEAQDGETTLSLIEEKQPDILIIDLSMP---KL 64 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATL----LSDVEPIENLVKTVR 123 S L Q I + + + + E+L L +S E + + + Sbjct: 65 SGLAVITQLKKQKNPIKIIVLTAAEAPNVWKEVLDLGVEGLALKSVSKAELVSGIKSVIA 124 Query: 124 SGNTHAERISAMLTS---------PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQI 174 N I L + ++ D R L++ E++V++L+ +G+ I Sbjct: 125 DENFIHSEIQPALDAYLAELEGQKTPEEDSGDKPSRPKKLSVREKQVIKLVAEGYKTKDI 184 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 A +L+ S++T+S + + M +L + ++AE+ + + Sbjct: 185 ADMLEISDRTVSKHRENIMTKLGMTASAELVNYAS 219 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 71/205 (34%), Gaps = 11/205 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ + GL+E++ E+ A AE + + + + + D+ + Sbjct: 6 LLADDHEMFLEGLRELLGKA-DGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN-- 62 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + + + + + VE L + + L +++ Sbjct: 63 -GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVAN 121 Query: 128 HAERISAMLTSPAMT-----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 ++ + S + ++ L+ E VL+LL KG QIA L S Sbjct: 122 GQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISK 181 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAW 207 T+ + + +L +S AE+ + Sbjct: 182 NTVDTHRRHILDKLGCNSMAELTRY 206 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESEDPR 67 +++ V+++G + + P +++++ A + Q +R +VI D+ + Sbjct: 9 LIVDDHAVVRSGYRSYLEQV-PGFQVVAEADCANEAYAQYKRMHPDVVIMDIMLQGASGI 67 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 ++S + + + L + + L + + Sbjct: 68 DASR---RILSNHPGAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIAVAG 124 Query: 128 HAERISAMLTSPAMTETHDFSYR-SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + A + + +D + L+ E ++ LL G + +IA L S KT++ Sbjct: 125 GDRYLDASMAQSLVFSRYDRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAKTVA 184 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQ 212 + + ++L + S+ ++ +A Sbjct: 185 NRASMIRQKLGVSSDIQLVKLAVAAD 210 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 250 4e-65 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 246 4e-64 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 246 4e-64 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 243 4e-63 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 242 1e-62 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 241 2e-62 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 240 3e-62 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 236 4e-61 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 235 7e-61 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 235 7e-61 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 235 1e-60 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 234 3e-60 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 234 3e-60 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 234 3e-60 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 233 4e-60 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 233 4e-60 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 232 7e-60 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 232 7e-60 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 232 1e-59 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 232 1e-59 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 231 2e-59 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 231 2e-59 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q04VJ6 Receiver component of a two-component response r... 230 3e-59 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 230 3e-59 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 230 3e-59 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 230 4e-59 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 229 8e-59 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 229 8e-59 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 229 9e-59 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 229 9e-59 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 229 1e-58 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 228 1e-58 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 227 2e-58 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 227 2e-58 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 227 3e-58 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 226 4e-58 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 226 5e-58 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 226 6e-58 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 225 6e-58 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 225 7e-58 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 225 7e-58 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 225 8e-58 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 225 9e-58 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 225 9e-58 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 225 1e-57 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 224 2e-57 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 224 2e-57 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 224 2e-57 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 224 2e-57 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 224 2e-57 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 224 2e-57 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 224 3e-57 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 224 3e-57 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 224 3e-57 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 223 3e-57 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 223 3e-57 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 223 4e-57 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 223 5e-57 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 223 5e-57 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 222 6e-57 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 222 6e-57 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 222 6e-57 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 222 8e-57 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 222 9e-57 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 222 9e-57 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 222 9e-57 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 222 1e-56 UniRef50_B3RA82 Response regulator protein; Response regulator r... 222 1e-56 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 222 1e-56 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 222 1e-56 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 221 1e-56 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 221 1e-56 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 221 1e-56 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 221 2e-56 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 221 2e-56 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 221 2e-56 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 221 2e-56 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 221 2e-56 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 220 2e-56 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 220 3e-56 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 220 4e-56 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 220 4e-56 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 220 4e-56 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 219 5e-56 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 219 5e-56 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 219 5e-56 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 219 6e-56 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 219 6e-56 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 219 7e-56 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 219 7e-56 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 219 7e-56 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 219 8e-56 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 219 8e-56 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 218 1e-55 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 218 1e-55 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 218 1e-55 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 218 1e-55 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 218 1e-55 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 218 1e-55 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 218 2e-55 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 218 2e-55 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 218 2e-55 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 218 2e-55 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 218 2e-55 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 218 2e-55 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 217 2e-55 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 217 2e-55 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 216 4e-55 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 216 4e-55 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 216 4e-55 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 216 4e-55 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 216 5e-55 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 216 6e-55 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 216 6e-55 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 216 6e-55 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 216 6e-55 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 215 7e-55 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 215 8e-55 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 215 1e-54 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 215 1e-54 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 215 1e-54 UniRef50_Q2L102 Putative two-component response regulator of cap... 215 1e-54 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 215 1e-54 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 215 1e-54 UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobact... 215 1e-54 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 214 1e-54 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 214 1e-54 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 214 2e-54 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 214 2e-54 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 214 2e-54 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 214 3e-54 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 214 3e-54 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 214 3e-54 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 214 3e-54 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 213 3e-54 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 213 4e-54 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 213 4e-54 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 213 5e-54 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 213 5e-54 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 213 5e-54 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 213 5e-54 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 213 5e-54 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 213 5e-54 UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba... 212 6e-54 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 212 6e-54 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 212 8e-54 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 212 8e-54 UniRef50_A5FQU5 Two component transcriptional regulator, LuxR fa... 212 9e-54 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 212 1e-53 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 212 1e-53 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 212 1e-53 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 212 1e-53 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 212 1e-53 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 212 1e-53 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 212 1e-53 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 212 1e-53 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 211 1e-53 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 211 2e-53 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 211 2e-53 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 211 2e-53 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 211 2e-53 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_B8IGH6 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator rece... 210 3e-53 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 210 3e-53 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 210 3e-53 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa... 210 4e-53 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 210 4e-53 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 210 4e-53 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 210 4e-53 UniRef50_UPI00017443C2 hypothetical protein VspiD_13430 n=2 Tax=... 210 4e-53 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 209 5e-53 Sequences not found previously or not previously below threshold: UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 227 2e-58 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 223 4e-57 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 221 2e-56 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 219 7e-56 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 219 8e-56 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 217 2e-55 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 216 5e-55 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 215 8e-55 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 214 2e-54 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 214 3e-54 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 212 1e-53 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 212 1e-53 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 211 2e-53 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 210 3e-53 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 209 5e-53 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 16/224 (7%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 ++ + + G++ ++ + E+ A+ + L Q R +V+ D+ Sbjct: 5 KILLTDDHTLFRQGVRTLLAAE-ADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + + E+ +F+ E + + P + L+ +R Sbjct: 62 -MSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 126 NTHAERISAMLTSPAM-------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 +S L S + S R LT ER++L++L +G + +IA+ Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSV 222 + S KT+ A K + MR+L IH+ A++ + + + LP Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYA---IQKKIIRLPET 221 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 7/214 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 I+ V++ GL+ ++ ++E++ A E L++ +++ DL+ Sbjct: 3 RVIIADDHTVVRNGLRHILERT-SDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 R+ E L + + + + + + V A L+ LV+ +R Sbjct: 60 -RNGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKV 118 Query: 126 NTHAERISAMLTSPAMTETHD-FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S + + L+ E +V R + G + QIA+ L S KT Sbjct: 119 AAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN 218 +S K M +L + S+A + + A+ + + Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARLFGDED 212 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 80/212 (37%), Gaps = 14/212 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 ++ V++ G ++ + + E++++A+ + R ++I DL+ + Sbjct: 2 KIVIADDHAVVRTGFSMIL-NYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S + + + + + +L + P E L+ VR+ Sbjct: 61 --SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS---------YRSVILTLSERKVLRLLGKGWGINQIAS 176 + LT+ + E + S IL+ E ++L L+ KG+G IA Sbjct: 119 YQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAE 178 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L S KT+ A K M +L + S E+ + Sbjct: 179 KLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 83/210 (39%), Gaps = 13/210 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +V +++ GL ++ + P+ E++ A + ++ +V+ D++ + Sbjct: 5 KVLVAEDHTIVRKGLCSLLYSE-PDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L +Y ++ + + S E L + L +L+K + + Sbjct: 64 GMD---ATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 126 NTHAERISAMLTSPAMTETHDF-------SYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + +S ++ + +L+ ER+VL+L+ +G +IA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ A +N ++L ++ AE+ + Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYA 210 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 87/210 (41%), Gaps = 11/210 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGES 63 C N ++ +++ GL+ ++ TH +++ A +TL + ++I D++ Sbjct: 2 CVNVLLADDHKIVRDGLRTLLETHGS-MNVVAEAENGQKTITLARELHPEIIIMDISMPD 60 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + + + S I + + + + +L + L E LV ++ Sbjct: 61 ---MNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQ 117 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYR-----SVILTLSERKVLRLLGKGWGINQIASLL 178 + ++ +S + + + S LT ER++L+LL +G QIA+ L Sbjct: 118 TVLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANL 177 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ + + ++L + S AE+ + Sbjct: 178 HVSVKTVETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 12/220 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGES 63 +++ +++ GL+ ++ + E++ + L L + R +V+ DL Sbjct: 2 AIRVMLVDDHALVREGLRALLERE-GDIEVVGETGSAAGVLALAEESRPEVVVMDLQL-- 58 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 R+ E L+ + EI V + L + IE L +R Sbjct: 59 GAGRNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIR 118 Query: 124 SGNTHAERISAMLTSPAMTETHDF-------SYRSVILTLSERKVLRLLGKGWGINQIAS 176 + + + + LT E +VLRL +G +IA Sbjct: 119 LVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIAR 178 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 L S KT+ A + + M++L +H ++ + + Sbjct: 179 RLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKL 218 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 80/215 (37%), Gaps = 8/215 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ +++ GL+ ++ E++ S + L R +++ D+ Sbjct: 5 RVVIVDDHALVRQGLRLILHG-VAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP--Q 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L ++ + + ++L + ++ + +V ++ G Sbjct: 62 GLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHG 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S A ET S + L+ E +VL LL +G+ ++A L S KT+ Sbjct: 122 QPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTV 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 + MRR+ +HS A + + ++ P Sbjct: 182 ETHRQHIMRRIGLHSRAALVRYAY---QNGLVDPP 213 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 21/223 (9%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++I + + G+K ++ ++E+++ E L L++ + +VI D+ Sbjct: 38 RIVLIDDHKLFREGIKRIL-DFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMP--- 93 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E LI Y + + + S + L L + L++ VR Sbjct: 94 HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVV 153 Query: 126 NTHAERISAMLTSPAMTETH---------------DFSYRSVILTLSERKVLRLLGKGWG 170 + +T + E D +LT E +VL+LL G Sbjct: 154 AEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKS 213 Query: 171 INQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 IA L S KT+ ++ +++L ++ + Sbjct: 214 NKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGW 256 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 78/209 (37%), Gaps = 8/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRS--GLVIADLAGESED 65 + PV++ GLK+++ ++ + AS+ + Q R + + D + Sbjct: 4 RVFIADDHPVVRQGLKQLL-GAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGK- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + L ++ + + + A+ +L A L+ E+LV +R Sbjct: 62 --GGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKV 119 Query: 126 NTHAERISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +SA L L+ E +++ LL G + +IA L S Sbjct: 120 ARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPN 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 TIS + + +L + SNAE+ + Q Sbjct: 180 TISTYRKRILEKLDLKSNAELMRYAIGHQ 208 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 78/208 (37%), Gaps = 9/208 (4%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGE 62 +++ PV++ G +E++ + ++ A + + +L+ R+ +++ D++ Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGE-ADLRVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + E ++ ++ + + + S + LL A L + L+ V Sbjct: 72 G---MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAV 128 Query: 123 RSGNTHAERISAMLTSPAMTETH---DFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 R+ + + + + L+ E +VLR+ G +IA L Sbjct: 129 RAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAW 207 S +T+ + +L + S E + Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 83/213 (38%), Gaps = 7/213 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGE 62 +++ V+ G + PE E++++AS L ++L + +V+ D++ Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQE-PEIEVVATASNGLEALELVKLHQPDVVLMDVSMP 65 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + E + + + + ++++ + +V+ + Sbjct: 66 ---IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAI 122 Query: 123 RSGNTHAERISAMLTSPAMT-ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 ++ + A TS + E + + L+ E +LR++ +G +IA+LL S Sbjct: 123 KTVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNIS 182 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 +T+ + + +L IHS AE+ + Sbjct: 183 YRTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 12/215 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 + P++ AG++ ++ PE E++ A++ L + + + D++ + Sbjct: 6 RVALADDHPIVLAGIRTLLNAD-PEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + + LL L E+L++ VR+ Sbjct: 65 ---GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAV 121 Query: 126 NTHAERISAMLTSPAMT------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + + S AM + D + L+ E VLRL+ +G+ +IA Sbjct: 122 AAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFD 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S K+I K A +L + + AE+ + + Sbjct: 182 LSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWL 216 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 235 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 9/208 (4%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDP 66 +++ V++AGL+ ++ + P+ ++ A +T + L++ DL+ Sbjct: 4 ILLVDDHAVLRAGLRLLLES-QPDMVVVGEAEDSRTAITQATTLQPDLILLDLSL---TN 59 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 S SL + + + + + L + L+ +R+ Sbjct: 60 SSGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVL 119 Query: 127 THAERISAMLTSPAMTETHD---FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 I LT + + + L+ ER+VL L+ +G+ +IA L S K Sbjct: 120 RGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSA 211 T+ + M +L + S A + + Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQFALDH 207 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 235 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 89/212 (41%), Gaps = 11/212 (5%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLA 60 P +++ P+M+ GL++++ + + A L L++ + LV+AD+ Sbjct: 9 PAKATKILLVDDHPMMREGLRQIIGNEI-DLAVCGEAENAFQALELVKSEKPDLVLADIT 67 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 ++ E L +Q+ ++ + + A +L + E + +++ Sbjct: 68 LPDKN---GLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQ 124 Query: 121 TVRSGNTHAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIA 175 +R + +S +++ + T S LT E +V RL+G+G +IA Sbjct: 125 AIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIA 184 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAW 207 + + S KT+ + + +L + + AE+ + Sbjct: 185 ANMHVSAKTVEVHRMNIKTKLGLKTAAELIRY 216 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 85/235 (36%), Gaps = 19/235 (8%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 N +++ P+ ++G++ + + P++ I+ A +E L L +++ DL+ Sbjct: 5 NILIVDDHPLFRSGIRWSLEQN-PQFVIVGEAADGSEALRLADELSPDVILVDLSLPG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E +L + + + + Q + + + E L+ + Sbjct: 62 -MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 126 NTHAERIS------AMLTSPAMTETHDFSYR-------SVILTLSERKVLRLLGKGWGIN 172 I+ + S + + + S LT E ++L + +G+ Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAA 227 +IA L S++T+ S +R+LA++ + + + + A Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLEDTEDSLPGPA 235 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 9/212 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 +++ +M++GL+ ++ + E++ A + + + Q R +V+ D++ Sbjct: 5 KVLIVDDHTLMRSGLRLMLSA-QEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP--- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E +L++ ++ + + E + + L + VR+ Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAV 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSV---ILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + I +T + E + L+ E+KVL L+ G+ +IA L S Sbjct: 121 YSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 KT+ K M +L +++ + Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 12/214 (5%) Query: 2 LPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADL 59 +P K ++ +++AG++ ++ P I+ A T L+ + I D+ Sbjct: 1 MPAPLK-IVLADDHALVRAGIRTLLEK-LPGVTIVGEAGDGRETVTLVHTFAPDIAIMDI 58 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 + + ++ + + + ++ L L L Sbjct: 59 TMPGLNGFD---ATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQ 115 Query: 120 KTVRSGNTHAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQI 174 + + +S ++ + E + + LT R++++L+ +G +I Sbjct: 116 LALNAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEI 175 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 A LL S KTI + M RL +H A + + Sbjct: 176 AFLLNLSVKTIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 88/225 (39%), Gaps = 8/225 (3%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESEDP 66 +++ +++ GL+ ++ + +++ AS+ L +++ + L I DL+ Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGW-VVAEASSGFQALEVMRHQPIDLAIVDLSMPG--- 70 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + + + +++ + + + + A+ ++ LV VR Sbjct: 71 MNGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVA 130 Query: 127 THAERISAMLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 T ++A L + + + + L+ E +VLR + G I IA L S KT Sbjct: 131 TGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKT 190 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEW 229 +S K+ +L + + A + + + A+ + P + Sbjct: 191 VSTHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDEPGLDLAEHRP 235 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 84/220 (38%), Gaps = 12/220 (5%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGE 62 ++ PV++ GL + + EI+ A T+ ++R +V+ DL Sbjct: 17 KTIKVLLADDHPVVRKGLGSCL-NNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 S E + ++ + + + + ++++ + P+ LV+ + Sbjct: 76 ---TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAI 132 Query: 123 RSGNTHAERISAMLTSPAMTET------HDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 S + S ++ + + + S S LT E +VL ++ +G ++AS Sbjct: 133 ESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMAS 192 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 + +T+ + M +L IH+ A + + + + Sbjct: 193 RMGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKL 232 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 77/217 (35%), Gaps = 11/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL------QLRRSGLVIADLAG 61 ++I +++ G++ + T P+ ++ A + L R LVI D+ Sbjct: 20 RVLLIDDHALVRDGMRMHL-TLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGM 78 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 +L QY EI + + A + + + P + L+ Sbjct: 79 ---RGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAA 135 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + + SA + E + LT ER +L +G+G +IA+ L S Sbjct: 136 IEAVLAGRVFYSARIARGM-AEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVS 194 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN 218 +T+ + + R+L I A + + G E Sbjct: 195 VRTVETHRLNLKRKLGIEGRAGLVKYAVEQAGETEGG 231 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 88/209 (42%), Gaps = 12/209 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 + ++ +++ GLK ++ ++E++ AS L++ + G+++ DL Sbjct: 3 SIVLADDHQIVRHGLKALLEAE-ADFEVVGEASDGIEAVNLVESLQPGVLVTDLMM---G 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E Y ++ + + V + + E L + E LV++VR Sbjct: 59 GMSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118 Query: 126 NTHAERISAMLTSPAMTETHDFS------YRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +S+ L+ A+ + S LT+ ER+VL L+ +G +IA L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S +T+ + + MR+L + + ++ + Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYA 207 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 6/210 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ V++ GL ++ + ++ +++ AS + L + + DL+ Sbjct: 9 RILLADDHRVLRKGLSLLLSSE-EDFSVVAEASDGEEALEKAAKTPVDIALLDLSMP--- 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + + + + S E L L L + +R+ Sbjct: 65 HMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTV 124 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + + + L+ ER+VL L+ G+ ++ IA L S KT+ Sbjct: 125 AAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S K +++L N+E+ + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNILG 214 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 10/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESED 65 ++ +++ GL ++ + +++ AS + + R + + D++ + Sbjct: 3 RVMLADDHTILRQGLVSLLSKD-ADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + E + + + ++ + L E L+ V++ Sbjct: 62 GM---EVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKAL 118 Query: 126 NTHAERISAMLTSPAMTETHDF----SYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 T S S T+ LT ER+V L+ G IA L S Sbjct: 119 ATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDIS 178 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 KT + + +L + + AE+ + Sbjct: 179 VKTAENHRGKVLDKLGVSNTAELVRYAAKH 208 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 8/206 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GL+ ++ E ++ + + L + +VI D+ + Sbjct: 4 RILIADDHAIVREGLRVLLERKGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPN---M 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + ++ + + + + + L +++ Sbjct: 61 NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGR 120 Query: 128 HAERISAMLTSPAMTE-----THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 IS + ++ ER+VL+L+ +G QIA L S Sbjct: 121 GKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSI 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWI 208 KT+ A + + M +L I S A + + Sbjct: 181 KTVEAHRRNIMNKLMISSVAGLTRFA 206 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 83/225 (36%), Gaps = 17/225 (7%) Query: 5 CCK-----NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIA 57 CK N ++ +++ GLK+++ P+ ++I A+ + +L+ ++ +V+ Sbjct: 4 RCKSVKKINVLIADDHALVRQGLKQIIE-LEPDIKVIGLAADGEEAVLKTQQLSPDVVLL 62 Query: 58 DLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIEN 117 D++ ++ + L I + + E + + E+ Sbjct: 63 DISMPKQN---GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESES 119 Query: 118 LVKTVRSGNTHAERISAMLTSPAMTETHDFS------YRSVILTLSERKVLRLLGKGWGI 171 L+K +R I L + + E + LT E +VL LL +G Sbjct: 120 LIKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINN 179 Query: 172 NQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 +I L S KT+ ++ +++ ++ + + + Sbjct: 180 KEIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNIKKI 224 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 88/212 (41%), Gaps = 12/212 (5%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGE 62 ++ V++ GL+ ++ +H P +++I A+ ++L +V+ D+A Sbjct: 2 KTIRILLADDHTVVRKGLRLLLESH-PGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + E + ++ VF+ S S ++ L L +L+ V Sbjct: 61 GLN---GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAV 117 Query: 123 RSGNTHAERISAMLTSPAMT------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 + + S ++ + + +LT ER+VL+LL +G ++A+ Sbjct: 118 IAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAA 177 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 +L S T+ + + +++L +HS AE+ + Sbjct: 178 ILNLSLYTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 15/212 (7%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR-------SGLVIADLA 60 ++ +++ G++ ++ P+ ++ A + Q+RR L + D+A Sbjct: 29 RILLADDHALVRRGVRLILDGE-PDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVA 87 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + + L Y + + + E L A + +LV+ Sbjct: 88 MPR---MTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSY----RSVILTLSERKVLRLLGKGWGINQIAS 176 R+ + S + + + LT E ++L+L+ +G +IA Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L S KT+ + + + +L + E+ + Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYA 236 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 78/210 (37%), Gaps = 13/210 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ PV ++GLK ++ T +Y +I+ A + + ++I D++ Sbjct: 4 RIMLVDDHPVFRSGLKHILCTE-ADYHVIAEADDGESAIEMAAEANPDIIIMDISMPG-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + +I + + + + E L + + LV V+ Sbjct: 61 -LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLV 119 Query: 126 NTHAERISAMLT-------SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 I L P S ++V L+ E++VL+ + G+ +I++ L Sbjct: 120 MNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTEL 179 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ K M ++ + + + Sbjct: 180 FISIKTVDTYKKRVMEKIGSKKKSALVRYA 209 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 90/225 (40%), Gaps = 14/225 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 ++ + + L+ ++ PE E+++ A++ + + + LV D+A Sbjct: 4 RILLADDHQMFRHALRALLARD-PELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPG-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L++++ + + + + + +LL ++ E + L++ +R+ Sbjct: 61 -MDGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTV 119 Query: 126 NTHAERISAMLTSPAMTETHDFS---YRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + + + D + LT ER+VL+L+ +G QI L + Sbjct: 120 CEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAA 179 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAA 227 T+ + + MR+L +H+ AE+ + + + PS A Sbjct: 180 STVEVHRRNLMRKLDLHNVAELTRYAIHSGIS-----PSASPGGA 219 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 13/212 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ V++AGLK ++ P+ E+I AS + + + LV+ DL + Sbjct: 6 RIVLADDHAVLRAGLKVLL-NAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L+ ++ ++ + + +L + L+ +R+ Sbjct: 65 GVDCIE---ELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 126 NTHAERISAMLTSPAM-------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 I + + + E S + L+ E +VLR L G IA LL Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 S KT+ K M +L +H AE+ + Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRYAME 213 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 76/213 (35%), Gaps = 11/213 (5%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDP 66 ++ +++ G+++++ P+ +++ A+ + RR ++I D+ + Sbjct: 9 ILIADDHSLVREGIRKILE-LEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN- 66 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E + ++ +I + + +ELL + + E LV+ V Sbjct: 67 --GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVA 124 Query: 127 THAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 A I + + + + S+ LT ER++L + G +IA L S Sbjct: 125 RGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFIS 184 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 KT+ ++ + + + Sbjct: 185 EKTVKNHLTHIFHKIGVSDRTQAALYALKHGLN 217 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 84/208 (40%), Gaps = 11/208 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 ++ +++ GLK ++ + E++++ A + R+ L++ DL+ Sbjct: 7 KILITEDHALVRKGLKSLISSR-SEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMP--- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + L + E+ + + + + L L + + L +R+ Sbjct: 63 KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAI 122 Query: 126 NTHAERISAMLTSPAMTE-----THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S+ L+ + T + + LT E++V +L+ +G QIA LL Sbjct: 123 MDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFI 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ + + M++L +HS E+ + Sbjct: 183 SPKTVDKHRTNLMKKLDLHSAREVSNFA 210 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 8/213 (3%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAG 61 G +++ P+++ GL+ ++ E++ A + L+ +V+ DL Sbjct: 16 GEPIRVLLVDDHPLLRHGLRALLEQ-VGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVM 74 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 + E +LI + ++ + + + L + + + Sbjct: 75 PG---VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAA 131 Query: 122 VRSGNTHAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 VR+ + T S LT ER++L LL G +IA L Sbjct: 132 VRAVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLF 191 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S KT+ S +L + + A Sbjct: 192 LSQKTVKNHLTSIFAKLQVADRTQAVVRARRAG 224 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 80/216 (37%), Gaps = 17/216 (7%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 N +++ +++ G+K + + I+ A+ + ++ + +VI D+ Sbjct: 5 NILLVDDHTIVRDGIKATL-KDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP--- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + +Y + + + + ++ + L + +K + + Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 126 NTHAERISAMLTSPAMTE-----------THDFSYRSVILTLSERKVLRLLGKGWGINQI 174 + + ++S ++ +S LT E+ +L+++ G +I Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 A L S +TI + + M++L + + E+ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 2/209 (0%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGES 63 I+ P++ G++ +M P EI++ A+ E L L+I D + + Sbjct: 2 AFKIILADDHPIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQHECDLLITDFSMPN 61 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 +D L +Y + + + L+ LL I L TV+ Sbjct: 62 DDNVDGMAMIKQLRRKYPNLPIIVLTQVHNLGVLQALMQIGINGLLLKKSVIAELANTVK 121 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + I + + + + L+L E +V+RLL G + Q+AS L +S K Sbjct: 122 KVLSGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVK 181 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 TIS QK +AM++L + S++E++ + Sbjct: 182 TISTQKTNAMQKLGLKSDSELFHYAQQQG 210 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 88/224 (39%), Gaps = 19/224 (8%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIAD 58 M P K ++ +++ GLK ++ +EI + + L Q LVI D Sbjct: 1 MKPTNTK-IFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVITD 56 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 ++ S + +L QY I + + +LL + + +L Sbjct: 57 ISMPG---LSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDL 113 Query: 119 VKTVRSGNTHAERISAMLTSPAMT----------ETHDFSYRSVILTLSERKVLRLLGKG 168 ++ + + + +S +T+ ++ E D +L+ ER++L+L+ +G Sbjct: 114 LRAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEG 173 Query: 169 WGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 I +L S T+ + + M++L +H A++ + A Sbjct: 174 NSNESIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAG 217 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIAD 58 M G +++ + + GL++++ T P E++ A+ L + + +V+ D Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETD-PAIEVVGEAANGQDALKMVAELQPDVVLMD 80 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + +++ QYR +H + + + + + L E L Sbjct: 81 INMPG---MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEEL 137 Query: 119 VKTVRSGNTHAERISAMLTSPAMTE----THDFSYRSVILTLSERKVLRLLGKGWGINQI 174 ++ + I L M E R L+ E +LRLL +G+ QI Sbjct: 138 LRAIHVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQI 197 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGD 225 A L + T+ ++ ++L + + + + P+ Sbjct: 198 ADALNLAESTVKNNLSALFQKLGVRDRTQAVIYA---ISHGLVPRPTDVPR 245 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 90/225 (40%), Gaps = 11/225 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 +++ +++ GL +++ + P + +A + E L++ +V+ D++ + Sbjct: 20 KVLIVDDHAILREGLIQLINST-PGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGK- 77 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + + Y +I + + A +L L E + L+ ++ Sbjct: 78 --SGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKV 135 Query: 126 NTHAERISAMLTSPAMTETHDFS-----YRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S + + + L+ E +V +L+GKG+G QIA L Sbjct: 136 LAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSL 195 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGD 225 S KT+ A + S ++L + S ++ + S Q ++ + S Sbjct: 196 SVKTVEAYRASIKQKLYLKSGPQLVHYAISWQQSQTSGIDSESSP 240 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 10/214 (4%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLA 60 P ++ +++ GL+ V+ P E++ AS + L +V+ D+ Sbjct: 7 PTAPIRVLIADDHALVREGLRYVLDAD-PGIEVVGEASNGRTAVDLALQHVPDVVVLDIT 65 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 E S + L + + + E + T L E L Sbjct: 66 MPEE---SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRA 122 Query: 121 TVRSGNTHAERISAMLTSPAMT----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 +R+ + S + + + + +LT ER VL + +G IA+ Sbjct: 123 AIRAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAA 182 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 L S +T+ A + S MR+L IHS A + + Sbjct: 183 ELGISRRTVEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 78/221 (35%), Gaps = 14/221 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 +V+ +++ G++ ++ FP+ +++ A L +V+ D+ + Sbjct: 3 KVMVVDDHSIVREGIRILLER-FPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L++ E+ + + + L LV+ VR Sbjct: 62 GID---ATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQV 118 Query: 126 NTHAERISAMLTSPAMTETHDF-----SYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + + + + V LT ER+VL+L+ +G A L Sbjct: 119 ACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNI 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 + KT+ + M++L + S AE+ + +++ S Sbjct: 179 NVKTVDTHRQQIMKKLKMRSVAELTKYA---IREGLISMES 216 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 78/206 (37%), Gaps = 9/206 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ +++AGL+ ++ + ++I AS L + + D++ Sbjct: 3 RVLLADDHVIVRAGLRRIIEDS-EDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L ++ ++ + + V + ++ E LV +R Sbjct: 60 -IDGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKL 118 Query: 126 NTHAERI---SAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 ++ + + +A L + ++ L+ E +VLR L G +IA S Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWI 208 KT+ + +++L + +NA++ + Sbjct: 179 KTVDTYRARLLKKLNLRNNADISRFA 204 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 73/214 (34%), Gaps = 12/214 (5%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESE 64 +++ +++ GLK ++ + E++ + + + +V+ D+ Sbjct: 5 VRVLLVEDHTIVREGLKALLTAT-EDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP-- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + + + + + + L + +LV +R Sbjct: 62 -KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIRE 120 Query: 125 GNTHAERISAMLTSPAMTETH------DFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 S + + E+ + + LT ER+VL L+G+G +IA +L Sbjct: 121 VAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKIL 180 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S KTI + M +L +H+ A + Sbjct: 181 GLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIG 214 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 85/208 (40%), Gaps = 7/208 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +++ V+++GL+ ++ + E+I+ A + + +++ D++ Sbjct: 6 RIMLVDDHEVVRSGLRRLLEQN-DGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPG-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E +I++Y + + + A + L ++ ++LV+ VR Sbjct: 63 -MGGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREV 121 Query: 126 NTHAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S + A+ + +L+ E +V RLL G G+ +I+++LK S KT Sbjct: 122 AQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKT 181 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 ++ + ++L I S E+ Sbjct: 182 VANYQTLLKQKLGITSPIELVRLAIKHG 209 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 8/234 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 +V PV+ G ++ + +++ A S E + +LQ +++ DLA Sbjct: 6 RVVVADDHPVILFGAEQALLKFQ-GIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQ 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L + ++ V + + L ++++ + + ++ V+ Sbjct: 65 YGDGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHV 124 Query: 126 NTHAERISAMLTSPA--MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + H E +S + S + VIL+ E +V+RL G I +I+ L +S K Sbjct: 125 SRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIK 184 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRRE 237 TIS QKN+AMR+L + ++E++ + S +NL S AA+ T Sbjct: 185 TISTQKNTAMRKLGLERDSELFQYAQS---NGLMNLSSYAPGAADTGTGPTEER 235 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 12/205 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 + I+ +++ GLK ++++ P + AS + L + LV+ D++ Sbjct: 6 SLIIAEDHTLLREGLKSLLQS-VPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPR-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + ++ E+ + + L + + + V S Sbjct: 63 -MDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESV 121 Query: 126 NTHAERISAMLTSPAM------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +S ++ + S LT E+++ +L+ +G+ +IA +L Sbjct: 122 LGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLV 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEM 204 S KT+ +++ M++L +HS AE+ Sbjct: 182 VSVKTVEKHRSNLMQKLGVHSAAEL 206 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 70/207 (33%), Gaps = 9/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ P++ G++ ++ + + + E++ + S+ + + +++ DL Sbjct: 25 RVLIVDDHPMVAEGIQSILES-YGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPD-- 81 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + EI + + L + E + + + Sbjct: 82 -VGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAV 140 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + + ++ LT E+ +L L +G ++A L S +T+ Sbjct: 141 MRGEQYLCTGAAGSLSPQS---QTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + + R+L I S A + + Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHG 224 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 14/211 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +V + + GL+ V+R P+ ++++ AS + + +V+ D+ Sbjct: 88 KVLVADDHALFRRGLEMVLRQE-PDIQLVAEASDGAEAVARAAETLPDVVLLDVRMP--- 143 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 R+ E ++ + + + E + L I+ + +R+ Sbjct: 144 KRTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAV 203 Query: 126 NTHAERISAMLTSPAMTETHDF--------SYRSVILTLSERKVLRLLGKGWGINQIASL 177 + IS + S + E + LT E +VLRL+ KG IA Sbjct: 204 HGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQ 263 Query: 178 LKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L S T+ + + +L +HS E + Sbjct: 264 LFISENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 7/210 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ V++ GL+ ++ + E++S A + + ++ + + D+ + Sbjct: 7 QILLVDDHAVVRGGLRLLLAQT-DDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGK- 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + ++ I + + + AV L + L+ P L+ +R Sbjct: 65 --GGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKV 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRS-VILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S L E + L+ E +VLR L G + QIA L S KT Sbjct: 123 AGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKT 182 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 ++ + + + +HSNAE+ + Sbjct: 183 VTTYRARIVEKTGLHSNAELTRYALDKGML 212 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 11/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ V++ GL+ T + E++ A+ L ++ + LV+ DL+ Sbjct: 2 KIVIADDHHVVRKGLRFFFAT-QDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMP--- 57 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + I Q+ + + + + S S + L E LVKT R Sbjct: 58 EMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQV 116 Query: 126 NTHAERIS----AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + ++S + + + + LT E+ VL + G +IA+ L S Sbjct: 117 HGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFIS 176 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN 218 KT+ ++ + +L + + + E++ Sbjct: 177 EKTVKTHVSNLLAKLEVADRTQAALFAVKYNLNGEIS 213 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 7/203 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGE 62 +V +++ G+ +++ + + +++ A T+ ++ LV+ DL Sbjct: 2 KPTKVLVADDHDLVREGICKLLE-LYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + I + + E++ + E L + + Sbjct: 61 R---MGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAI 117 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + T + E + Y L+ E++VL LL +G QIA L S Sbjct: 118 DKVIKGDKVF-PRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISE 176 Query: 183 KTISAQKNSAMRRLAIHSNAEMY 205 KT+ ++ +R+L+++ + Sbjct: 177 KTVKNHVSNILRKLSVNDRTQAV 199 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 84/208 (40%), Gaps = 11/208 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ +M+ GLK ++ E+++ A+ + +V+ DL Sbjct: 14 RVLLVDDHKIMRKGLKAILALEH-TIEVVAEAANGREAIRKADELLPDVVVMDLTMP--- 69 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E +++ + ++ + + + +E L +E LV + + Sbjct: 70 EMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTV 129 Query: 126 NTHAERISAMLTSPAMT-----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + +TS + + S V L+ ER+VL+L+ G +IA Sbjct: 130 ASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGV 189 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT++ Q+ S M++L + + A++ + Sbjct: 190 SIKTVAVQRMSVMKKLNLFNVADLTKYA 217 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 84/216 (38%), Gaps = 7/216 (3%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAG 61 +++ V+++GL ++ + + ++ A + + +++ D++ Sbjct: 2 SLAIRVMLVDDHAVVRSGLCRLLEQNT-DISVVGEAESGEQAYQTYPEISPDVLVMDMSM 60 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 E +++++ + + A++ L ++ E+LVK Sbjct: 61 PG---MGGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKA 117 Query: 122 VRSGNTHAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 VR + +S+ + A+ + LT E +V RLL +G ++ IAS L Sbjct: 118 VREVKSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNI 177 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 KT++ + S ++L IHS ++ E Sbjct: 178 GQKTVANYQTSLKQKLGIHSPVDLVRLAMKYGVIME 213 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 13/218 (5%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL------RRSGLVI 56 ++I +++ G++ + T P E++ A + L L R LVI Sbjct: 111 TSSAARVLLIDDHALVRDGMRMHL-TLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVI 169 Query: 57 ADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIE 116 D+ +L +Y E+ + + + + + P + Sbjct: 170 TDIGM---RGMGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPAD 226 Query: 117 NLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 L+ +++ SA + + LT ER +L +G+G IA Sbjct: 227 ELLAAIQAVLAGRVFYSARIARGMAAQAV---SPLDALTPRERDILHGIGRGQANKDIAV 283 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 L S +T+ + + R+L I AE+ + G Sbjct: 284 QLGVSVRTVETHRLNLKRKLGIEGRAELVKYAVQQLGL 321 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 13/227 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ V++ GL+ ++ + +I+ A E + + Q +++ D+A Sbjct: 32 RVLLADDHTVVRQGLRALLSGEK-DIQIVGEAGTGREAVQMAQKLTPDVILMDIAMP--- 87 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + + + S +L + L +LV VR Sbjct: 88 LMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRET 147 Query: 126 NTHAERISAMLTSPAMTETH------DFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + S + + + + S LT E + L + G IA + Sbjct: 148 HKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMG 207 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDA 226 S KT+ + M +L IH A + + A+G + N S+ + Sbjct: 208 ISIKTVEKHRQQVMNKLNIHEVASLTRYAI-AKGMIDANGQSLMPNP 253 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 68/205 (33%), Gaps = 10/205 (4%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPRS 68 + V++ G ++ + + ++ A+ L+ +++ D++ + + Sbjct: 6 IADDHAVVRQGFAFIINSQC-DMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE--N 62 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 + + + + L A + E L+ +R T Sbjct: 63 GLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVATG 122 Query: 129 AERISAMLTSPAMTETHDFS-----YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 I + + H S L+ E ++ LL +G+ + A L S K Sbjct: 123 ETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISVK 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI 208 T+ ++ +L ++S AE+ Sbjct: 183 TVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 80/240 (33%), Gaps = 13/240 (5%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIAD 58 M P +++ P+++ G++ + + A++ E L L +V+ D Sbjct: 1 MTP--PIRILLVDDHPLVRDGVRMRLEAT-EHICVAGEAASVGESLPLAHALAPDIVLTD 57 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + S Q+ + + + + + P + L Sbjct: 58 IRMP---AASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQL 114 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 ++ + + + S L + + + + LT E VL+ + +G +IA+L+ Sbjct: 115 IEAIEAVHQGGCYFSPGL-EQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALM 173 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR----ELNLPSVYGDAAEWNTAEL 234 S +T+ + R+L I A + + +++ A+ A Sbjct: 174 GTSVRTVETHRLHLRRKLRIEGQAALMKYAVDHADLTHDPLHTGPTALFDPPAQAVAAPG 233 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 10/205 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ P+++ GL+ V +E++ AS L++ +V+ DL Sbjct: 13 RLLIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP--- 68 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + + + + + S + + L P E+L++ VR+ Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAA 128 Query: 126 NTHAERISAMLTSPAMTE----THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 ++ + MT + + LT E +VLRL+ G + A L S Sbjct: 129 AAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFIS 188 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYA 206 T+ A + + A A Sbjct: 189 EATVKTHLLHAYAKFGVRDRAAAVA 213 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 8/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ +++ GL+ +++ YE+ A SA + L++ + +++ DL+ Sbjct: 70 KVLIADDHALVRDGLRHILQNA-SGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPG-- 126 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 R+ E + + + + + + AV + L+ LV V Sbjct: 127 -RNGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKV 185 Query: 126 NTHAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + +S + ++ + L+ E V R + G + QIA L S K Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+S K + ++ + A + + + Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYALRHK 274 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 82/202 (40%), Gaps = 8/202 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPRS 68 ++ +++AGL++ + H + ++ AS L+++ +++ DL+ + Sbjct: 35 IVDDHAIVRAGLRQFLSEHV-DLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQSGLD 93 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 L ++ ++ + + A+ L+ + L+ + +V+ +R+ Sbjct: 94 ALAM---LRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIALG 150 Query: 129 AERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 ++ + + D + L+ E +V L KG IA L S KT+S Sbjct: 151 RRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTVS 210 Query: 187 AQKNSAMRRLAIHSNAEMYAWI 208 + M ++ + SN+++ + Sbjct: 211 TYRTRLMEKMGLSSNSDLTYYA 232 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 12/218 (5%) Query: 2 LPG-CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIAD 58 LPG ++ PV + GL+ ++ E++ A + + L + +V+ D Sbjct: 4 LPGNEAIRVLITDDHPVFRQGLRGLLEAL--GVEVVGEAESGPQAVQLAAELQPDVVVMD 61 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 L + E ++ I + + + L E + Sbjct: 62 LHMPGGN---GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEI 118 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYR----SVILTLSERKVLRLLGKGWGINQI 174 + VR+ + +T D LT ER+VL+L+ +G +I Sbjct: 119 ARAVRAVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEI 178 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 A L S KT+ ++ +L + A+ A Sbjct: 179 AQTLFLSPKTVRNHVSNIFMKLHVADRAQAIVLAREAG 216 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 11/213 (5%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLA 60 P +++ ++ G + ++ P+ E+ ++A +AE L LL+ R LV+ DL Sbjct: 6 PVSKARVLLVDDHRMVLEGYRFML-NAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLT 64 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 RS + +++ + E + A L + + Sbjct: 65 L---GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLT 121 Query: 121 TVRSGNTHAERISAMLTSPAMTET-----HDFSYRSVILTLSERKVLRLLGKGWGINQIA 175 VR+ +S+ L + + S L+ E +V RL G+G +IA Sbjct: 122 AVRTVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIA 181 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 + L S KT+S ++ +L ++AEM Sbjct: 182 AQLNLSPKTVSVHRDHIKEKLGFSTSAEMIRQA 214 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 9/206 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 ++ +++ GLK ++ + + + AS L++LR+ ++ DL Sbjct: 3 RTLIADDHDILRIGLKHILSDT-GDIVVTAEASNGIEALVELRKGTFDALVLDLTMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 R+ E + ++ ++ + + AV L + L L +R Sbjct: 60 -RNGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKV 118 Query: 126 NTHAERISAMLTSPA---MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 I+ + + D LT E ++ ++ +G G+ +I L S Sbjct: 119 ADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSV 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWI 208 KT+S K S + ++ + ++AE+ + Sbjct: 179 KTVSTHKASILAKMNLRNSAELVRYA 204 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 80/217 (36%), Gaps = 14/217 (6%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAG 61 +++ +++ GLK ++ P+ E++ A L L+ + +V+ D+ Sbjct: 6 SSPIRLLIVDDQSLIRQGLKAMLEQE-PDLEVVGDAENGKVALELVAELQPDVVLMDIRM 64 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 ++ + I + + + S + L P L Sbjct: 65 P---EMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADA 121 Query: 122 VRSGNTHAERISAML--------TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 +R G++ + L + A + S + +T E++VL L+G G + Sbjct: 122 IRFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNRE 181 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 IA L + T+ S + RL + + +++ + NS Sbjct: 182 IAQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYANS 218 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 85/211 (40%), Gaps = 11/211 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 + I+ +++ G+K ++++ E+E++ A E + + +V+ D+ Sbjct: 6 SIIIADDHTLIRDGIKSLLQS-VDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP--- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 +S E + + ++ + ++ + + L E ++K V++ Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAV 121 Query: 126 NTHAERISAMLTSPAMTETHDF-----SYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + S + S + + S + LT E +VL+ + G IA L Sbjct: 122 SAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFI 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 S +T+ + + M++L +H++AE+ Sbjct: 182 SVRTVETHRINLMKKLDVHNSAELIKKAMDL 212 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 8/210 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESE 64 ++ V++ GL++ + + E++I++ A+ L L++ +V+ D+ Sbjct: 2 VKVLIADDHAVVRGGLRQFLSST-EEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + E + ++ + S A+ L + L+ P ++ + + Sbjct: 61 N---GLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHT 117 Query: 125 GNTHAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 A +S L + T L+ E VL LL KG + +I S Sbjct: 118 VVAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSV 177 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 KTIS + + +L + SNAE+ ++ + Sbjct: 178 KTISTYRARILEKLDLASNAEITRYVLQHK 207 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 79/215 (36%), Gaps = 13/215 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESED 65 ++ P+++ GL+ ++ P+ ++ A E + L + + + + D++ Sbjct: 7 RVLLADDHPIVRVGLRALLEAE-PDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-- 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + S + + + + +L + + +LV+ +R Sbjct: 64 --NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIASLLK 179 I + D + + +L+ ER+VLRL G+ +IA L Sbjct: 122 ARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLF 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S KT+ ++ M++L +E+ + Sbjct: 182 LSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 83/210 (39%), Gaps = 9/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ + + L+ ++ P I+ A E + L+ + + D+ Sbjct: 4 RIVLADDHQMFRHALRAMLEKE-PGIRIVGEASNGDELIDLISHQPVDIACVDIGMPG-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E L++ + + + + S ++LL ++ E E L++ + + Sbjct: 61 -MNGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + + + D + + +T ER+VL+L+ +G+ +IA L + Sbjct: 120 QQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAP 179 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+ + + MR+L +HS AE+ + + Sbjct: 180 STVEVHRRNIMRKLDLHSVAELTKYAIRSG 209 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 77/207 (37%), Gaps = 7/207 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 I+ + + GL ++ H EI+ A L L++ + + D++ + Sbjct: 3 RIIMADDHTIFRQGLAHLLSAHQE-LEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + ++ + R + + + A++ + L+ + + Sbjct: 62 ---GLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S ++ + E V L+ E++V+RL+ G +IA L S KT+ Sbjct: 119 AAGKRFVSEVVAEK-VNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTV 177 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + MR+L +H+ A++ + Sbjct: 178 DTHRTRLMRKLNLHTTADVVRYAMRMG 204 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 77/208 (37%), Gaps = 10/208 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL---LQLRRSGLVIADLAGESE 64 ++ +++ G+K ++ +++ L ++ + + + D+A Sbjct: 3 RILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP-- 60 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + L+ + + + + + + V + +++ ++ Sbjct: 61 -ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKE 119 Query: 125 GNTHAERISAMLTSPAMTETHDFSYR----SVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + + ++ + + LT E+++L+L+ +G+ +IA Sbjct: 120 VSAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGL 179 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S T+ +N+ MR+L IH AE+ + Sbjct: 180 SLNTVHVHRNNIMRKLDIHKQAELVRYA 207 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 225 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 9/240 (3%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAG 61 +V P+++ GLK + P+ +++ A E L L+ +V+ DL Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFL-DIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNM 60 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 + L + + + S + + E + A L ++L + Sbjct: 61 PGS---DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQA 117 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +RS + + T LT ER+VL L+ G +IA L + Sbjct: 118 IRSVADGQVIFAREAVTAM---TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVA 174 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS 241 KT+ +S R+L + + + + A A +A +R + + Sbjct: 175 EKTVKTHLSSLFRKLGVADRTQAALYAVTHGMAGHTEGRLESPPRAGRQSAVHKRRVWEA 234 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 80/222 (36%), Gaps = 13/222 (5%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDP 66 +++ +++ G++ ++ E+ ++ A L + +V+ D+ Sbjct: 5 IVLVDDHKLVRDGVRMILER-GSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPG--- 60 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + E L+ + + + + V + + L+ +R+ Sbjct: 61 MNGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVA 120 Query: 127 THAERISAMLTSPAMTE------THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S+ ++ + L+ E +VLRL+ +G IA LL Sbjct: 121 RGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDL 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSV 222 +T+ + + + M++L +++ A + +A G N P Sbjct: 181 GLQTVRSYRKTMMKKLGVNNVAGLTQLALAA-GITHWNKPDA 221 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ P++++G++ V+ + + A + L + + +VI D + Sbjct: 7 KIVIADDHPIVRSGIRAVLEQRAEWW-VCGEADNGETAVRLAREHAAKIVILDYSLP--- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + E + S E L L +E LV V + Sbjct: 63 VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAAL 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKSNK 183 S ++ + + D LT ER+V+R + +G +IA+ L S K Sbjct: 123 IRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVK 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI 208 T+ + + +AMR+L + + ++ + Sbjct: 183 TVDSHRTTAMRKLGLRNAVDLVRYA 207 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 83/210 (39%), Gaps = 8/210 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESE 64 IV +++AGL ++ P E++ A + + LQ + LV+ DL E Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGA-PGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGE 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + + Y ++ + + + + + + + L++ + Sbjct: 62 N---GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHK 118 Query: 125 GNTHAERISAMLTSPAM--TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + +S ++ + + +L+ E+++ RLL +G + I+ L S+ Sbjct: 119 VVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISD 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +T+SA K + + +L + + E+ + Q Sbjct: 179 RTVSAHKINLLNKLGLKNVVELVHYSIQHQ 208 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 13/208 (6%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 +V V++ G++ ++ +H P + + AS L Q R +V+ D+ + Sbjct: 1 MVADDHEVVRRGVRALVESH-PGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELN-- 57 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + + + + + + L + + +LV + + + Sbjct: 58 -GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSK 116 Query: 128 HAERISAMLTSPAMTETHDFSY-------RSVILTLSERKVLRLLGKGWGINQIASLLKK 180 HA + + R LT ER+VLRLL +G ++A L Sbjct: 117 HAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSI 176 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ + + MR+L S ++ + Sbjct: 177 SAKTVETHRANVMRKLGASSIVDLVHYA 204 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 73/214 (34%), Gaps = 10/214 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ +++ G+K ++ + E+++ A + L R + + D+ Sbjct: 4 KILLADDHKILREGVKALL-NRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMP--- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++ + V + + S E+L L LV+ VR Sbjct: 60 QMDGIEATRRIV-EDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKV 118 Query: 126 NTHAERISAMLTSPAMT---ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + ++ + LT E+++L LL +G ++A L S Sbjct: 119 MDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSI 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 KT+ + M +L + + A++ + Sbjct: 179 KTVGTHRQHIMNKLKLKNLADLVKYAIRNGMISI 212 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 82/205 (40%), Gaps = 8/205 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ +++ GLK+++ + E+++ A L + +V+ D++ Sbjct: 8 KVVIADDHAILREGLKQILA-ETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD-- 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 RS E + ++ + + + + A+ L LS + LV +R+ Sbjct: 65 -RSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTV 123 Query: 126 NTHAERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + ISA + + + L+ E + L ++ G +++IA L S K Sbjct: 124 AKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVK 183 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI 208 T+S + + +L + NAE+ + Sbjct: 184 TVSMYRARLLEKLNLRHNAELTHYA 208 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 75/216 (34%), Gaps = 8/216 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ +++ G++ ++ + ++ A+ + + + LV+ D++ Sbjct: 3 KILLVDDHELVRTGIRRILEDVQ-GFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++ + + +++ L+ + + +R Sbjct: 60 -IGGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + +S + DFS L+ E ++ +L KG + IA L S K Sbjct: 119 AAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAK 178 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 T++ + +L + ++ E+ + NL Sbjct: 179 TVNTHRYRMFEKLNVSTDVELTHLALRHKLINSENL 214 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 9/214 (4%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLA 60 PG +++ V++ GL+ + + E++ AS + + + R +++ D+ Sbjct: 5 PGR-VRVLLVDDHQVVRRGLRTFLE-VQEDIEVVGEASDGEEGIARAEELRPDVILMDIK 62 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 E L + + S + V L A + + L Sbjct: 63 MPGT---DGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAG 119 Query: 121 TVRSGNTHAERISAMLTSPAMTETH--DFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 +RS + + + +T+ S R LT ER+VL + G +IA L Sbjct: 120 AIRSVHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARAL 179 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S KT+ ++ + +L + + W Sbjct: 180 VLSEKTVKTHVSNILMKLDVADRTQAALWAVRHG 213 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 11/208 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL---RRSGLVIADLAGESE 64 +++ +++ G+ ++ P+ E+ + A D L L + +V+ D++ Sbjct: 7 QVMLVDDHAMLRHGM-AMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL--- 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S E S+ + + + + A L + EP E LV + Sbjct: 63 KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAIHE 122 Query: 125 GNTHAERIS----AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S A L + + LT SE +VL L+G G +IA LL + Sbjct: 123 VLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKLLSR 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KTI + + +L + A++ + Sbjct: 183 SIKTIETHRFNIRTKLNLKDGADLIRYA 210 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 81/213 (38%), Gaps = 11/213 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ +++ GL+ ++ + + + +I+ + + +L+ + +V+ DL+ + Sbjct: 3 RVLLVDDHTMIRKGLRVLLES-YSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLP--N 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + V + E + + E L + + Sbjct: 60 GLDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEV 119 Query: 126 NTHAER----ISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +S + + + D +LTL E++++RL+ G+ ++A L S Sbjct: 120 YRGKCFYKTSVSQEIINLWLRS--DAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLIS 177 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 KT+ K + M++L + S ++ + + Sbjct: 178 VKTVENHKTNIMQKLGLDSKHQLIQYAIKNRYL 210 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 14/234 (5%) Query: 2 LPGCCK-NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIAD 58 + K ++I P++ GLK V+ T F E+ +A L + + + +V+ D Sbjct: 1 MTERPKIRVLLIDNHPLVLDGLKAVLET-FDHIEVAGTAGLAQTGLDIARQIQPQVVLMD 59 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + E + + ++ EI V + +M A + + + Sbjct: 60 INMPKLSGIDAIELFRN---EFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEI 116 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 V + + S+ + M E + LT E +L L+ G +IA +L Sbjct: 117 VAAIETVADGGTYFSSGVFDALMGERAEEGS--DPLTPREHDILGLIVAGRSNREIAEVL 174 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTA 232 S+ T + + ++L I + A + + A SV G+ + Sbjct: 175 GISSATAETHRKNLKKKLGIATTAGLIRYALDHGIA-----SSVVGNPRLPTSG 223 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 10/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESED 65 ++ V+++ LK ++ + E+I A+ L + R +V+ DL+ + Sbjct: 2 KLLIADDHAVVRSALKFMI-NAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + E + + + + L + E L+ +RS Sbjct: 61 --NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSV 118 Query: 126 NTHAERISAML-----TSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 I + + L+ E+++L L+ G+G +IA L Sbjct: 119 MGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFI 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAW 207 S KT+ K+ M++L + +++ + Sbjct: 179 SAKTVEVHKSHIMKKLEMKKFSDLLRF 205 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 9/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 I+ + + GL++++ ++ ++ A+ D L L+ +V+ DL+ Sbjct: 3 RIIIADDHTIFREGLRQILA-EANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGIS 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 ++ + + + + + VE L ++ + L+ +R Sbjct: 62 GITLVRAAREIAGAH---RIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + +SA + A+ S LT ER+V +L G I++IA L S Sbjct: 119 SQGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSI 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 KT+S K + + ++ + A++ + Sbjct: 179 KTVSTHKTNLLAKMDAETTADLVRYALRHD 208 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 72/214 (33%), Gaps = 11/214 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ + GL+E++ E+ A AE + + + + + D+ + Sbjct: 4 RVLLADDHEMFLEGLRELL-GKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + + + VE L + + L +++ Sbjct: 63 ---GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTV 119 Query: 126 NTHAERISAMLTSPAMTE-----THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 ++ + S + + ++ L+ E VL+LL KG QIA L Sbjct: 120 ANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSI 179 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S T+ + + +L +S AE+ + Sbjct: 180 SKNTVDTHRRHILDKLGCNSMAELTRYAIREGYL 213 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 16/218 (7%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 +V +++ G+ ++ P E++ +A E + L+ + +V+ DL Sbjct: 2 VVADDQAIVREGIVMLL-GLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRC--- 57 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 E + ++ V + + + L L+ E +V+ + + + Sbjct: 58 DGVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMS 117 Query: 128 HAERISAMLTSPAMTETHD----------FSYRSVILTLSERKVLRLLGKGWGINQIASL 177 +S + + S LT E +VL L+ +G +IA Sbjct: 118 GEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARA 177 Query: 178 LKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 L S T+ N+ + + + AR Sbjct: 178 LHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLAR 215 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 77/208 (37%), Gaps = 7/208 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ V+++GL ++ H ++++ A + + + + DL+ Sbjct: 7 RVLLVDDHTVVRSGLCRLLEQH-SGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPG-- 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++++YR + + A++ L ++ + LVK V Sbjct: 64 -MGGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEV 122 Query: 126 NTHAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 IS + A+ L+ E +V RL +G +IA +LK S KT Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 ++ ++L + + EM + Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHG 210 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 78/221 (35%), Gaps = 8/221 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESED 65 +++ +++ G++ ++ + ++++ A + + L + +V+ D+ Sbjct: 9 KVLIVDDHALVRMGIRRLLED-MSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPG-- 65 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L I + + + +L L+ E + +R Sbjct: 66 -IDGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKV 124 Query: 126 NTHAERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + +SA + + S +L+ E +V+ ++ G + IA L S+K Sbjct: 125 AKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSK 184 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYG 224 TI+ + +L I ++ E+ + N S Sbjct: 185 TINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPNDLSQDD 225 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 79/212 (37%), Gaps = 7/212 (3%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGES 63 + ++ P++Q GLK + + + + I+ S L + +++ D++ + Sbjct: 8 PVSVQIVDDHPMVQGGLKACL-SFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPT 66 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + E Q E + + S + L E + ++ Sbjct: 67 MNGIDATEIITE---QLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIK 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + S+ + + + + S LT E+ VL L KG +IA +L S + Sbjct: 124 AVANGKTHFSSSIAKLLIDNPVN-TNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFR 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 T+ A + + +L IHS A++ ++ + Sbjct: 183 TVEAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 8/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 +++ + + GLKE++ P + A E + +L +V D+A Sbjct: 6 KVLIVDDHTLFRKGLKEILLDT-PYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSD-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + Y E + + A+ L C + L+ E L+K V Sbjct: 63 -INGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKI 121 Query: 126 NTHAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + + + + + L+ E +V ++ KG + +I+ L S K Sbjct: 122 IKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIK 181 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+S + + +L + +NAE+ + Sbjct: 182 TVSTYRARILEKLGLENNAEIINYAIKHG 210 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 79/218 (36%), Gaps = 10/218 (4%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIAD 58 M P +++ +++ GLK + PE EI+ A + + + + +++ D Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAI-AQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMD 60 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + + + + + VE + L P E+ Sbjct: 61 INMP---QMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDF 117 Query: 119 VKTVRSGNTHAERISA----MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQI 174 +++++ + ++ L T +T E+ VL+L+ G +I Sbjct: 118 IQSIQQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREI 177 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + L + KT+ +S + R+ + S ++ W NSA Sbjct: 178 SETLHITEKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 11/211 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL------QLRRSGLVIADLAG 61 I++ P ++ G++ + + ++ A + D + R +V+ D++ Sbjct: 6 RLILVDDHPFVRDGVRMRLEAT-DDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 S E ++ I + + + + + P + LV Sbjct: 65 ---RGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNA 121 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +R+ + S L S + LT E L L G+ QIA L S Sbjct: 122 IRAVHAGETFFSPEL-QQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMS 180 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +T+ + + R+L I AE+ + Sbjct: 181 VRTVETHRLNLRRKLRITGQAELVKYAIDHM 211 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 24/211 (11%), Positives = 72/211 (34%), Gaps = 10/211 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 I++ + ++G++ ++ + ++ AS + +L + +V D A Sbjct: 5 RIILVDDHSLFRSGMRGLL-DRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E ++ + + + + ++ L P++ +++ + + Sbjct: 62 -MNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETV 120 Query: 126 NTHAERISAM----LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 L S T + L+ E ++L + +G +IA L S Sbjct: 121 AAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFIS 180 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +T+ + + + + + A + + Sbjct: 181 KRTVDKHRANILEKTGCKNTASLVVYAVRHG 211 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 84/207 (40%), Gaps = 7/207 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESED 65 +V +++ GLK + + E+++ A+ L ++ +++ D++ Sbjct: 3 RVLVADDHFLVREGLKMTIAAMQ-DVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGLS 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + S++ + + + A ++L + ++ + E L+ +R Sbjct: 62 GVD---LVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKV 118 Query: 126 NTHAERISAMLTSPAMTE-THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + I L + + + LT E ++LR+L G + QIA+ L S KT Sbjct: 119 ASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSA 211 +S K AM++L +N E+ + A Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYAPEA 205 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 9/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 +V+ ++ ++ ++ + ++ AS+ D L ++ R ++ D+ ++ Sbjct: 6 KILVVDDHAFLRDAIRSILEDE-SDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + Y + ++ L L E +V +R Sbjct: 65 ---GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRML 121 Query: 126 NTHAERISAMLTSPAM---TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 I +T + + LT E+++L L KG +IA L S+ Sbjct: 122 YRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISD 181 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 KT+ N ++L + S ++ + Q Sbjct: 182 KTVKIHINKIFKKLNVKSRSQAVIYAVRNQ 211 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 7/208 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ +++ GLK+++ T + + + A +E + L+ L++ D+ Sbjct: 3 RILIADDHAIVRGGLKQIIATTN-DIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S + + ++ + + + A L L+ + L+ +R Sbjct: 60 -ISGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKL 118 Query: 126 NTHAERISAMLTSPAMTETHDFS-YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 I L + ETH +L+ E +VL++L G IN+IA + S KT Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 IS K M++L + +NAE+ + Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYAIRHG 206 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 79/209 (37%), Gaps = 6/209 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 +++ ++++GL+ ++ P ++ A + E L LL+ ++ + I D++ Sbjct: 3 RVVLVEDHLLVRSGLRHLLEARGP-VRVVGEAGSCREALELLEKVQADVAILDVSLPDGT 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L ++ E+ + + L +S + L+ V + Sbjct: 62 ---GIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ L E S L+ E +VLRLL +G ++A L S KT+ Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + M +L + S +E+ + Sbjct: 179 ATYRERGMEKLGLASRSELLRYAARKGWI 207 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 15/215 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ +++ G+ +V+ T ++ E L LL + + LVI D++ Sbjct: 5 RVVIADDHAMLRRGICQVIET-QEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP--- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + + Y I +F+ L + ++ + + Sbjct: 61 KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTI 120 Query: 126 NTHAERIS-------AMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 +S + + + F L+ E +VL LL +G +IA +L Sbjct: 121 LEGKAFLSSIFTKDMPDILTDMVKNGSSF--PGGTLSPREEEVLTLLAEGKSNKKIADIL 178 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 S +T+ + S M+RL + + A++ + Sbjct: 179 CISTRTVEHHRASIMKRLDLRTLADLIKYAIRHGY 213 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 73/213 (34%), Gaps = 7/213 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGE 62 ++ +++ G++ + PE E++ A+ L R +++ D++ Sbjct: 3 KPIRVLLADDHALVRDGIRARL-NKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + E + + EI + + ++ + ++ + Sbjct: 62 ---VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAI 118 Query: 123 RSGNTHAERISAMLTSPAMT-ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 S + S+ + + T LT ER+VL + KG ++A L S Sbjct: 119 SSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGIS 178 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 +T+ + + + ++ + A++Y Sbjct: 179 VRTVESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 82/218 (37%), Gaps = 24/218 (11%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 ++I + + G+K ++ PE+E+++ + + L++ +++ D+ Sbjct: 11 QIVIIDDHQLFREGVKRILA-MEPEFEVVADGEDGENAVELVEKYNPDVILMDINMP--- 66 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E LI +Y ++ + + S +L + L + L++ V+ Sbjct: 67 KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVV 126 Query: 126 NTHAERISAMLTSPAMTETH------------------DFSYRSVILTLSERKVLRLLGK 167 I +T + E ++ ILT E +VL+L+ Sbjct: 127 AQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTD 186 Query: 168 GWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 G+ I L S KT+ ++ ++++ ++ + Sbjct: 187 GYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAV 224 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 14/216 (6%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESE 64 K +++ P+ + GLK ++R P Y + A + L + R L + D++ Sbjct: 4 KRLLIVDDHPLFREGLKAILRRD-PSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPD- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 RS + L + + + + E L L+ +NL+ +R+ Sbjct: 62 --RSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRA 119 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSV--------ILTLSERKVLRLLGKGWGINQIAS 176 + L+ + R+ LT ER+V+RL+ +G ++A+ Sbjct: 120 VAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAA 179 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 L+ S KT + S MR+L + ++ E+ + Sbjct: 180 ALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLG 215 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 7/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ V+++GL+ V+ P+ +++ A ++ +++ DL E Sbjct: 15 RVVIADDHRVVRSGLRMVL-DAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L+++ E V + + + A E L + + LV+ VR Sbjct: 74 S---LPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLA 130 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ L + E S LT E +VLRL+ G +IA L S +T+ Sbjct: 131 REGRTYLNPELGARMAAE-PPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTV 189 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + +++ S AE+ + Sbjct: 190 ESHRAHIQQKVRRSSRAELVRYALDHGLM 218 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 12/209 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ +++ GL++++ P ++ + + +V+ D+ Sbjct: 6 KLLIADDHILIREGLRKILS-IEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMP--- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + I + + EL+ + + + L+KT+ Sbjct: 62 IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIASLLK 179 I LT+ + E S + + LT E +VL+ + KG IA+ L Sbjct: 122 AQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALY 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ + +++ + + + Sbjct: 182 ISEKTVKNHLTNIFQKIGVADRTQAALYA 210 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 78/212 (36%), Gaps = 9/212 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 + +++ G++ ++ E++ AS + ++ + +++ D+ Sbjct: 3 KIAIADDHALLREGMRRMLSQS-ELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMP--- 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E +++ + + + A+ L +S +E L+K + Sbjct: 59 VKDGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS---YRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + + + + L+ E +V+ L +G +IA +L+ S Sbjct: 119 HEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISV 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 KT+ ++ +++L + +N+++ + Sbjct: 179 KTVDTHRSHVLKKLELRNNSDITRFAIQHGYI 210 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 86/225 (38%), Gaps = 17/225 (7%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESE 64 K +++ P+ + G+K ++ Y+ + A AE L L Q + LV D++ Sbjct: 4 KRVLIVDDHPLFREGVKSLVERS-ANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPD- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S E ++ E + + + E + L++ + Sbjct: 62 --MSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDA 119 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVIL--------TLSERKVLRLLGKGWGINQIAS 176 + ++ + + + R L T E++VLRL+ +G QIA+ Sbjct: 120 LCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAA 179 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPS 221 ++ S KT+ + + M++L +HS E+ + +++ S Sbjct: 180 AIELSPKTVENHRTNLMKKLDVHSKMELVKYAARL---GLIDVES 221 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 8/210 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 +++ P+ + GL+ + + E+++ A L +L LV+ D+ Sbjct: 3 RVLLVDDHPLFREGLRYRLSLD-SDIEVLAEADNGQQALEILNKMPVDLVLTDINMP--- 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + Q V + + + + P + L++ ++ Sbjct: 59 QMDGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 SA + + E V T E+ VLRL+ G +IA + S +T+ Sbjct: 119 AAGKRYFSADVINTLSQELASGKQALV--TQREQLVLRLISLGMNNKRIAQEMDVSVRTV 176 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 K + ++L I S A + + R Sbjct: 177 ETHKRNIKQKLMIDSTAGLVRYAIDHGLDR 206 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 7/203 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 +++ P + G++ + E +I A++ E + L LV++D+ + Sbjct: 6 RVLLVDDHPFVLDGVRLRLEAT-GEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDAN 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + Q+ + + + A + P LV +R+ Sbjct: 65 ---GLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++A L + LT E VL+LL +G +IA L S +T+ Sbjct: 122 AAGGTYLNAEL-QAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTV 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 + R+L + AE+ + Sbjct: 181 ETHRLHLRRKLRVGGRAELVKYA 203 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 7/210 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 ++ P+ + GL + ++ I+ A+ L + +V+ D++ + Sbjct: 2 RIFIVDDHPIFREGLIARLSMD-DDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + ++ EI + + + +L + +R Sbjct: 61 GMDAAEIFKD---KFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVI 117 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + S ++ + + + ++ +LT E+ VLRLL G ++A L S +TI Sbjct: 118 HNGGIYYSRAISDLLVQSSQEP-DKNTVLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 + + +LAI ++A + + Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGLDG 206 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 71/219 (32%), Gaps = 7/219 (3%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLA 60 P +++ V++ GL+ + + E++ A+ + L + +VI DL Sbjct: 6 PSRPVRVLLVDDHAVVRQGLRLFLSLD-SQIEVVGEAANGEEALAAAERLHPDVVIMDLM 64 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + L Q+ + + + S + + + + L Sbjct: 65 MP---VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLAD 121 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + + R+ + + R LT E VL+L+ +G+ IA Sbjct: 122 AIHAAARGEVRLHPEAARRLVRDFRTPEMR-ETLTPKEVIVLQLIARGYSNRDIARDQGV 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 + T+ + + +L + S + + AR Sbjct: 181 TEATVKTHVSRLLGKLGLESRTQAALYALRHGLARLEET 219 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 86/226 (38%), Gaps = 10/226 (4%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDP 66 +++ +++ G + +++ E+I+ A E + + + +V+ D++ + Sbjct: 7 IMLVDDHAIVREGYRSLLQK-QDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ-- 63 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 S + + + + S A++ ++ E+L++ + Sbjct: 64 -SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVA 122 Query: 127 THAERISAMLTSPAMTE-THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +SA + E LT+ E ++LRLL IA LL S KT+ Sbjct: 123 KNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTV 182 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNT 231 S ++L + S+ E+ +NL + +A E N+ Sbjct: 183 SNSHYIIKKKLGVSSDIELTRLA---IKMNLVNLLDLVDEAHEDNS 225 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 78/203 (38%), Gaps = 7/203 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 +++ V++ GL+ ++ E+ A + + +++ D D Sbjct: 6 KVMLVDDHSVVRQGLRLLLELD-DTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 C +L Q+ ++ + + + + E + L E L+ T+++ Sbjct: 65 GIIGC---GNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + +T + LT E ++L ++ G +IA ++K S+KT Sbjct: 122 HKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKT 181 Query: 185 ISAQKNSAMRRLAIHSNAEMYAW 207 + ++ +++L + + E ++ Sbjct: 182 VRNYVSNILQKLNVSNRTEAASY 204 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 83/218 (38%), Gaps = 11/218 (5%) Query: 9 GIVISKIPVMQAGLKEVM--RTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESE 64 +++ +++ G++ ++ R +++ A + + L++ +R +V+ D+ Sbjct: 4 VLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMPG- 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 ++ + + + + +L + L+ IE ++ ++ Sbjct: 63 --IGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 125 GNTHAERISAMLTSPAMTET--HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 IS + + L+ ER++L ++ +G IA+ L S Sbjct: 121 AMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISP 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWI--NSAQGARELN 218 KT+S K M +L I ++ ++ + +RE+ Sbjct: 181 KTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIASREVG 218 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 12/216 (5%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIAD 58 M ++ +++ GL+ ++ ++EI + AS + + +VI D Sbjct: 1 MTTELKTRILLADDHDIVRRGLRTLLE-LRSDWEICAEASDGRAAVQFAEDLAPDIVILD 59 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 L+ + E + + + + E L + + +L Sbjct: 60 LSMPELN---GLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDL 116 Query: 119 VKTVRSGNTHAERISAMLTSPAMTE------THDFSYRSVILTLSERKVLRLLGKGWGIN 172 V + ++ L + S LT ER++L+LL +G Sbjct: 117 ANAVDALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNR 176 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 + L S KT + M +L I S A++ + Sbjct: 177 DVGKALNISVKTAETHRARIMAKLGIDSVADLVRYA 212 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 77/217 (35%), Gaps = 12/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL------LQLRRSGLVIADLAG 61 +++ +++ GLK + P +E+I+ A + L+ + +++ DL Sbjct: 14 KVMIVDDHDMVRMGLKTYLMQD-PGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 + E + S++ ++ V + S V+ + + + E L+ Sbjct: 73 PG---MNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYA 129 Query: 122 VRSGNTHAERISAMLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 ++ ++ + +T E++VL L+ +G IA L Sbjct: 130 LQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELH 189 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 S KT+ ++ + + + ++ + + Sbjct: 190 ISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWVGH 226 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 11/212 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDPR 67 +++ +++AG+K +++ Y + + A + + L L + LVI D++ Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSA-YTVTAEAESGEEALRLLAQQPIDLVIMDISMPG---M 56 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + + Y + + + + + L L ++ + Sbjct: 57 GGLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQ 116 Query: 128 HAERISAMLTSPAMT-----ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S M +LT ER+V L G+ I +IA L S Sbjct: 117 GRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSV 176 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 KT+ K +L +E+ Sbjct: 177 KTVDTHKKHIYEKLHCSRRSELVTLALRNGLL 208 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 79/214 (36%), Gaps = 11/214 (5%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESE 64 + +++ P ++ G+ ++ P+ AS + L +RR + + D++ Sbjct: 23 RRVLLVDDHPAIRRGMAAII-DEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGT 81 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + E ++++ + + + A+ L + E +E ++ +R Sbjct: 82 N---GVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRK 138 Query: 125 GNTHAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 +S + + + + L+ E +VLRLLG+G+G +IA L Sbjct: 139 VGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELS 198 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 S KT+ + +L EM + Sbjct: 199 LSVKTVETHRAHIKEKLGFKEAGEMVRFAIDWVA 232 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 93/237 (39%), Gaps = 11/237 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ P G++ + + P + SA E + LL ++++D A Sbjct: 7 RVVLADDHPATLGGVQHGLSS-VPTIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPGGA 65 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + L Y + V + + LL + ++S + +++L+ V + Sbjct: 66 YGDGIALFSYLQRNYPAVKLVVLTMLDNPAVIKGLLGLGISCIVSKSDAVDHLIPAVHAA 125 Query: 126 NTHAERISAM----LTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 T S + + + + ++ L+ E +V+RL G +N+IA L +S Sbjct: 126 ATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKLSRS 185 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEW-NTAELRRE 237 KTIS QK AM++L + + ++ + + P G AAE E R + Sbjct: 186 KKTISTQKARAMQKLGVEKDIDLLRYAMEH---GIVAAPGGEGKAAEQDGEGEGRTD 239 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 13/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESED 65 +V+ + + G+ V+R+ P ++ A + Q + + + D+ + Sbjct: 11 KVLVVDDHELFRRGVVTVLRST-PGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + E + + + E L++ VR Sbjct: 70 ---GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQV 126 Query: 126 NTHAERISAMLT-------SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + + L S S LT ER+VL+ L G +IA L Sbjct: 127 YEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARAL 186 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S T+ + +L + + A+ A+ AR Sbjct: 187 FISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIAR 223 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 77/209 (36%), Gaps = 9/209 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ + G+K + + E + A+ E + L + ++ L+I D+ Sbjct: 3 RLVIAEDHTALIDGIKVFFE-YEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMP--- 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + ++ ++ I + ++L + + ++ L+ +R Sbjct: 59 VMDGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +T + + +LT +R++L+L+G+G +IA L T+ Sbjct: 119 HEGEHYYDPNIT---VKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTV 175 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + +R+L + E+ + + Sbjct: 176 ETHRKNMIRKLGLQGAGELLRYALEKKYD 204 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 8/219 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ +++ GL+ ++ P+ E++ A++ T+ ++ ++ DL+ Sbjct: 5 RIVLADDHVILREGLRALISA-QPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWG 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + L + + + + L A P +L+ +R+ Sbjct: 64 SATTITRVTQL---APRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAV 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 T A I L L+ E +VL LL KG +IA L S KT+ Sbjct: 121 ATGARVIDPALGDVL--GGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTV 178 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYG 224 + + + + A+ + A + Sbjct: 179 ETYRARLREKTGLKTRADYVRYGLEAGLLGATPVEGAKP 217 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 11/218 (5%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAG 61 +++ P+++AG + ++ + EI+ A + +VI DL Sbjct: 2 SSPIKILLVDDHPLVRAGFQRLLISD-ESIEIVGEADNGQSACEMYASHMPDVVIMDLNM 60 Query: 62 ESE--------DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVE 113 S+ + E +IS + + + + ++ L+ Sbjct: 61 PSDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRC 120 Query: 114 PIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 + L++ V++ + E I+ + LT E ++ LL +G ++ Sbjct: 121 APDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSI 180 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 +A + S KT+ A + + R+L I +N+E+ Sbjct: 181 VAEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRH 218 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 86/216 (39%), Gaps = 12/216 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRR--SGLVIADLAGES 63 I+ ++ GL+ ++ + E+I A LL+L + + + D+ Sbjct: 8 KVIIADDHHMVLEGLEALI-KVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDMP- 65 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + E + ++Y I + + + S E++ + + LV +R Sbjct: 66 --VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIR 123 Query: 124 SGNTHAERISAMLTSPAMTETHDF----SYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + E S +T + + V LT E++VL L+GKG +I+ L Sbjct: 124 TIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLF 183 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 ++ T+ + + + +L + ++ E+ ++ + ++ Sbjct: 184 IADTTVETHRRNLIDKLEVKNSKELILYVAKNKESK 219 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 6/211 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +++ P+ + GL ++ + +EI++ A+ L + R LV+ D+ Sbjct: 7 RILLVDDHPLFRRGLSFLLAQEY-GFEIVAEATDGLEGVKLARFHRPDLVLLDVEMP--- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E ++ + + + + L + + LV+ +R Sbjct: 63 VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQA 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S + + + + S LT ER VLR + G IA + S T+ Sbjct: 123 VAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTV 182 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 A + R+L I + + +E Sbjct: 183 KAHMQNIFRKLNIDNRVRAAVYARELGLDKE 213 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 9/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR---SGLVIADLAGESE 64 ++ +++ G+K+++ + ++ + A + L +++ DL+ Sbjct: 3 RLLIADDHAIVREGIKKILALAQ-DIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPGV 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S + +QY + + A + A ++ E L++ +R Sbjct: 62 TGMS---LITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRR 118 Query: 125 GNTHAERISAMLTSPAM--TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 I L S IL+ E ++ LL G +N IA +L SN Sbjct: 119 VAAGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISN 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 KT+S K + + ++ +HS A++ + + Sbjct: 179 KTVSTHKLNLITKMKLHSTADLVHYALEHK 208 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 73/211 (34%), Gaps = 9/211 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 +V+ +++ G+ ++ +++ A + L L + + +V+ D+ Sbjct: 3 KVLVVDDHDLVRTGITRMLADI-EGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L+ +I V + L+ A ++ +E +V+ +R Sbjct: 60 -IGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS---YRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 IS + ++ L+ E ++ ++ + I+ L S Sbjct: 119 FAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSP 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 KT++ + +L+I S+ E+ Sbjct: 179 KTVNTYRYRIFEKLSITSDVELALLAVRHGM 209 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 9/213 (4%) Query: 1 MLPGCCK-NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIA 57 M+ K I+ +++AGLK+++ + +I+ A + E + L + +++ Sbjct: 1 MMSKKPKIKVIIADDHAILRAGLKQILS-ETEDILVIAEAQNANEAIKLGSQPEADVLLL 59 Query: 58 DLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIEN 117 D++ RS E + + I + + A+ L A L Sbjct: 60 DISLPD---RSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSE 116 Query: 118 LVKTVRSGNTHAERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIA 175 LV +++ + I+ + + D +L+ E + ++ G + +A Sbjct: 117 LVNAIQTVARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVA 176 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 + L S KT+S + + ++ + NAE+ + Sbjct: 177 NKLSLSVKTVSMYRARLLEKMQLKHNAELTHYA 209 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 9/208 (4%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESE 64 ++ +++ GL ++ + + A L Q R +V+ D+A Sbjct: 3 VRILIADDHAIVREGLTMILESS--GMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPEL 60 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + + + E+ + + + + L LV VR+ Sbjct: 61 NGID---ATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRA 117 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + +P F L+L ER+V++L+ +G +IA LL S K+ Sbjct: 118 VIRGECYFGEGVDAP--QAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKS 175 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 I ++ M +L + + + + Sbjct: 176 IETYRSRLMVKLGVGNIPALVKFALQHG 203 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 9/232 (3%) Query: 2 LPGC-CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIAD 58 +PG ++ P + G + + +++SA S E + L ++++D Sbjct: 1 MPGNFPIRIVIADDHPAVVIGARYELSATN-TLAVVASANNSTELMETLANHPCDVLVSD 59 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 A + + +++ +Y + V M LL A ++S + +L Sbjct: 60 YAMPGTEYGDGLAMFSAILKRYPNLRIVVMTMMENAVALRALLDLGIACVVSKSDMTSHL 119 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + + T+ +S + + + ++ L+ E +V+RL G +N IA L Sbjct: 120 TMAIHAAYTNGRYLSPSM-DRILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQL 178 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN----LPSVYGDA 226 +S KTIS QK+SAM++L I + ++ + + + LP+V Sbjct: 179 SRSKKTISTQKSSAMQKLGIERDVDLVRYAIACGLVSDYGYATALPAVDEPP 230 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESE 64 ++ +++ GL ++ + I+ A + + + +V+ DL+ Sbjct: 3 VRILIAEDQQLVRQGLVALLA--VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMP-- 58 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 E + ++ + + + + E L L+ + + Sbjct: 59 -ELDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINA 117 Query: 125 GNTHAERISAMLTSPAMTETHDFSY-RSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + L+ + E + S LT ER+VL+L+ +G +IA L + K Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI 208 T+ + M++L +H++AE+ A+ Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYA 202 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 68/217 (31%), Gaps = 11/217 (5%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLA 60 P + +++ + + L+ ++ P+ +I A L + +++ D++ Sbjct: 19 PAKAISVLLVDDHVLFRQALRHLLEAE-PDIRVIGEAGDGRSAQQLAERFHPDVILMDIS 77 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 L + + + + + + L ++ Sbjct: 78 MPG---VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVID 134 Query: 121 TVRSGNTHAERISAMLTSPAMTETH-----DFSYRSVILTLSERKVLRLLGKGWGINQIA 175 +R+ I L + + E LT E ++LRL+ G +IA Sbjct: 135 AIRAVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIA 194 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + L + T+ + + +L + + + S Sbjct: 195 AELSLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHG 231 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 78/206 (37%), Gaps = 6/206 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEII-SSASAEDLTLLQLRRSGLVIADLAGESEDP 66 N +++ +++ G+++++ ++ + + + + + +++ D++ + Sbjct: 4 NILLVDDHAIVRQGIRQLLIDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLPDTN- 62 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E L + + AV L A LS ++ ++ Sbjct: 63 --GIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQVA 120 Query: 127 THAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + +S + + L+ E + L +L G + IA+ L S KT Sbjct: 121 AGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSVKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINS 210 +S ++ + ++ + +NAE+ ++ S Sbjct: 181 VSVYRSRLLEKMRLSNNAELTFYVMS 206 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 78/209 (37%), Gaps = 6/209 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 N I+ ++ GLK ++ H P +++ AS + L ++ + + D++ Sbjct: 8 NIIIADDHQIVIDGLKSLLVAH-PHIKVVGEASDGEEALKLIENNTVNIAVLDISMP--- 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + +Y I + + EL + E V+ + + Sbjct: 64 KMNGVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETI 123 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 N E I + + + +++ T E+ VLRL+ ++I++ L +N T+ Sbjct: 124 NNGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTV 183 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + + + + S+ + + Sbjct: 184 ETHRRNLIEKTGVKSSLGLVRYAVENGYL 212 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 73/203 (35%), Gaps = 9/203 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESED 65 +V+ PV++ GL ++ + ++ A D + Q R + +V+ DLA Sbjct: 3 RILVVDDHPVVREGLVAILEA-QEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + V + + + ++ + + L P E++ + VR Sbjct: 61 --DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVV 118 Query: 126 NTHAERISAMLTSPAMTETHD---FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + ++ + D LT E VL L+ +G +IA L + Sbjct: 119 YRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITE 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMY 205 +T+ N+ R+L + E Sbjct: 179 RTVKFHANAIYRKLDVSGRTEAV 201 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 70/208 (33%), Gaps = 12/208 (5%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL---TLLQLRRSGLVIADLAGESEDPR 67 ++ +++ GLK+++ + E ++++ D L + R +V+ D+ Sbjct: 6 IVEDHTIVRQGLKQLLAK-YAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG---M 61 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + +Y + + + ++ L+ ++ Sbjct: 62 DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYN 121 Query: 128 HAERISAMLTSPAMTETHDFSYR-----SVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + ++ + D LT E++VL + G G +I L S Sbjct: 122 GQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIST 181 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINS 210 +T+ + + +R+ + + E+ + Sbjct: 182 RTVENHRANILRKFGLKNTVELVKFAIE 209 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 14/215 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESED 65 +V+ +++ GL ++ P +E+I+ A + + + + I DL Sbjct: 11 RILVVDDHHIVRQGLVALL-NTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPR-- 67 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + + V + + L L ++L +RS Sbjct: 68 -MNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSV 126 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + RI ++ LT E VLRL+ +G +IA+ L S T+ Sbjct: 127 HAGKSRIPTVVAERLAERMSG-----SELTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 N+ + +L + + +A ++L Sbjct: 182 KTHINNLLSKLGVSDRTQA---ATTALQRGLVHLE 213 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 70/206 (33%), Gaps = 7/206 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 + +++ P+++ G + V+ + + +++ A + +V+ D++ Sbjct: 10 SVLLVDDHPIVRQGYRRVLES-QGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGA- 67 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E ++ ++ + + + ++ +V +RS Sbjct: 68 --SGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSV 125 Query: 126 NTHAERISAMLTSPAMTETHDFSYR-SVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S + ++ + L E ++LR G QIA+ L S KT Sbjct: 126 ARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKT 185 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINS 210 + + ++A++ S Sbjct: 186 VQNYHYLIKTKTGARTDAQLVRLAAS 211 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 8/211 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGE 62 ++ +M+ GLK++ E+++ A L+ L+ + L++ D++ Sbjct: 3 RLIKLMIADDHVIMREGLKQIFALD-ENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSMP 61 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 E +++QY + + + S A +L ++ + E L+ + Sbjct: 62 GIC---GEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAI 118 Query: 123 RSGNTHAERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 R A I + + R +LT E +++ +L +G G+N IA +L Sbjct: 119 RRVAQGARYIDHSIAEQIVFADCQTRGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAI 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 SNKT+S K+ M ++ +NA++ + S Sbjct: 179 SNKTVSTHKSRLMEKMQFTTNADIVKYALSQ 209 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 72/213 (33%), Gaps = 14/213 (6%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEII--SSASAEDLTLLQLRRSGLVIADLAGES 63 + + + GL ++ E++ + E + + + +++ DL Sbjct: 2 PVKVAIADDHVLFRKGLVTILELD-DNIEVVYGADNGKELIDKVDAQPPDVILMDLKMP- 59 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 E + ++Y E+ + + + L L + LV + Sbjct: 60 --VMDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIG 117 Query: 124 SGNTHAERISAMLTSPAM--------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIA 175 + + +++ + + S+ LT E++VL L+ K ++A Sbjct: 118 TVMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMA 177 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L SN+T+ + + + + + A + + Sbjct: 178 EKLFISNRTVEGHRKNLLEKTGAKNTAGLVVFA 210 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 75/212 (35%), Gaps = 10/212 (4%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLA 60 P + +I PV++ G + P+ ++ A L + + +V+ DL Sbjct: 18 PASKLHIYLIDDHPVVREGFARALSDE-PDMVVVGQAGTAADALRETASCKPDVVLVDLN 76 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 R E +L +Q + + + + E L L +E +++ Sbjct: 77 IPD---RDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIE 133 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYR----SVILTLSERKVLRLLGKGWGINQIAS 176 +R T +S+ + + + LT ER+VLRLL G + A+ Sbjct: 134 GIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAA 193 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 L S KT+ + +L S E+ Sbjct: 194 RLTISPKTVETHRVRIYAKLGCKSAVELTRIA 225 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 76/208 (36%), Gaps = 7/208 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 + +++ V++ G + ++ + + A+ + R +V+ D++ Sbjct: 7 SVLLVDDHAVVREGYRRLLE-LNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGA- 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E ++++ + + L ++ + LV+ VR+ Sbjct: 65 --SGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTI 122 Query: 126 NTHAERISAMLTSPA-MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 A +S ++ + L+ E +VLRLL +G+ + IA L S KT Sbjct: 123 ARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 ++ ++ ++ + ++ + Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMASRLG 210 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 11/220 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 I+ + + G++ ++ + +++ A + + +V+ DL+ Sbjct: 4 RIILADDHVMFREGMRALLERE-EDMVVVAEAGDGVSVVEKTLENMPDVVVLDLSMPG-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E + + I + + S +E L + + + LV VR Sbjct: 61 -MNGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSV--ILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 +S L+ ++ D LT E + RLL G +I LK S+K Sbjct: 120 FKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSK 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVY 223 T+ + M++L I + A++ N A + P + Sbjct: 180 TVETYRLKVMKKLNISNIAQLV---NHAVQEGIVGRPESF 216 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 77/212 (36%), Gaps = 8/212 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ + ++GL+ ++ FP + A+ + L + +++ D++ ++ Sbjct: 3 RILLADDHAMFRSGLRRILEAEFPGAS-VGEAATIADVQERLGAQPWDVLLLDISMAGQN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L ++ + V + ++ L + L+ E L++ +RS Sbjct: 62 S---LNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSV 118 Query: 126 NTHAERISAMLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + L L+ E ++ L +++IA L+ S K Sbjct: 119 LAGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVK 178 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 T+S + + ++A+ SNAE+ + Sbjct: 179 TVSTYRGRILEKMALRSNAELMQYAVRHGLVG 210 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 74/217 (34%), Gaps = 16/217 (7%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGE 62 ++ +++AG + ++ + E++ A E + + R+ +V+ D+ Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSD-DGIEVVGEAGDGWEAVEVATRERADVVLMDVQMP 77 Query: 63 SEDPRSVCEHYYSLI----SQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 E L+ + + + + + E L + L E+L Sbjct: 78 ---KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDL 133 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFS-----YRSVILTLSERKVLRLLGKGWGINQ 173 +++VR +S +T + + R LT E +VL LL KG + Sbjct: 134 IESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAE 193 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 IA L T+ + + +L + + Sbjct: 194 IARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYE 230 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 74/208 (35%), Gaps = 7/208 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESEDPR 67 ++ +++ G++ ++ + E++ A+ E LTL R +++ D++ Sbjct: 1 MLADDHELVRDGIRARLQK-VADLEVVGEATNGREALTLAHDLRPDVLLMDVSMP---VM 56 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + EI + + ++ + ++ + S + Sbjct: 57 NGLEAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVAS 116 Query: 128 HAERISAMLTSPAMTET-HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 S+ + + LT ER+VL + +G ++A L S +T+ Sbjct: 117 GGYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVE 176 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + + ++ + A++Y Sbjct: 177 SHRLNLREKVGNKNAAQLYKVAQDLGLL 204 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 72/207 (34%), Gaps = 8/207 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 ++ +++ + ++ P+ +I++ A + + ++ + +V+ DL Sbjct: 3 RVVLADDHRLIRQAIDGML-RDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + ++ + + L + + L++ +RS Sbjct: 60 -MGGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 I + + D + LT E +VL + G IA L S K Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T+S ++ RL + ++A++ Sbjct: 179 TVSTYRSRIFERLGVRNDAQLTRIAID 205 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 77/223 (34%), Gaps = 23/223 (10%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR-------RSGLVIADLA 60 ++ +++ G+K+++ + + A + +R +V+ D+A Sbjct: 3 RVVICDDHVIVRQGIKQILADA-GDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 R + SL +++ + + + + AV L A L+ E ++ Sbjct: 62 MP---QRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMID 118 Query: 121 TVRSGNTHAERISAMLTSPAMTE------------THDFSYRSVILTLSERKVLRLLGKG 168 +R I+ + D + L+ E +V LL G Sbjct: 119 AIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAG 178 Query: 169 WGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 + +IA L S+ T+S + + + + ++ E+ + Sbjct: 179 KSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQ 221 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 5/209 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 I+ PV++ G + V+ + ++ A + +TLL + L++ D + Sbjct: 4 RIIIADDHPVVRIGTRAVIESSGVG-RVVGEADSAQALMTLLGSQPCDLLVTDYSMPGSP 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + ++ ++ + + + + +L L+ ++ L + +++ Sbjct: 63 QADGFAMIGMIRRRHPDLPVLMLSVSNNLAILRMVLDSGVLGLVDKSSSMDELPQAIQAV 122 Query: 126 NTHAERISAMLTSP--AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 IS L A L+ E +VLRLLG G + +I+ L KS Sbjct: 123 YRGQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRLLGTGMTVKEISLQLHKSVS 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 TIS QK AM +L + +AE++ ++ + Sbjct: 183 TISRQKGDAMLKLGLKGDAELFDYLRDGK 211 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 82/207 (39%), Gaps = 8/207 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +V + + GLK+V+ T + ++ A L +Q +VI D+ + Sbjct: 4 RILVADDHAIFREGLKQVIGTTV-DMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRN 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 V S+ ++ + M A+ A L+ L+ + Sbjct: 63 GLDVLTEMKSIK---PKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKI 119 Query: 126 NTHAERISAMLTSPAMT--ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + +S+ L ++ H+ L+ E +V+ ++ G + +IA+ L S K Sbjct: 120 SMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVK 179 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T+S + +R+L + +NAE+ ++ Sbjct: 180 TVSTYRAHILRKLNMKNNAELTRFVIE 206 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 80/215 (37%), Gaps = 11/215 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ P+++ G ++ H + ++ A ++ + + L+I D++ + Sbjct: 10 KVMIVDDHPIVREGYSRLIE-HQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDG- 67 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + +Q+ +I + + A L ++ + E L+K + Sbjct: 68 --SGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQV 125 Query: 126 NTHAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +SA +T + ++ + L+ E +V +G+G IA L Sbjct: 126 LKGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNL 185 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S+KT+ + + +L + + + + Sbjct: 186 SSKTVETYRENIKHKLNLENATALTRHAIQWVLEK 220 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 7/212 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ V++ G ++ E++ A D L Q +VI D+ Sbjct: 2 KIVIADDHAVVRQGYASLLSAMLAPCEVL-EAGNGDQAYSLCQSDSPDVVIMDVNM---Q 57 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E ++ + + +F + L ++ E L++ V+ Sbjct: 58 GISGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKV 117 Query: 126 NTHAERISAMLTSPAMTETHDFSY-RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + L + R +T E ++ +L +G + +I+ L S+KT Sbjct: 118 SAGQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKT 177 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 +S +L I S AE+ + Sbjct: 178 VSNYTAILKSKLNIGSTAELVHLAIETGLVKV 209 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 83/218 (38%), Gaps = 12/218 (5%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESE 64 ++ +++ GLK ++++ ++ A + L + + + DL+ Sbjct: 5 VTVVIADDHALVREGLKTILKS-QSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMP-- 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 +S + L + + ++ + + L + + + LV + + Sbjct: 62 -IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIET 119 Query: 125 GNTHAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 ++ +++ + + LT ER+VL+ + G+ +IA LL Sbjct: 120 VMQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLV 179 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAREL 217 S KT+ +++ M++L + S AE+ A+ + Sbjct: 180 ISVKTVEKHRSNFMKKLGLRSKAELKAYSEELKKKGIY 217 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 75/208 (36%), Gaps = 7/208 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ +++ GL ++T E+EI+ A + L ++ R +V+ DL+ Sbjct: 16 KLLLVEDHHIVRRGLVFFLKTR-EEFEIVGEAENGEDALTFVRTERPDVVLMDLSMP--- 71 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + I + + S S + L E LV ++ + Sbjct: 72 KMDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAI 131 Query: 126 NTHAERISAMLTSPAM-TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +T + +LT E++VL+ + KG +IA+ L + +T Sbjct: 132 YEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQT 191 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + ++ + +L + + + Sbjct: 192 VKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 8/205 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 +V+ +++ GLK+++ P+ +I AS+ E +++L+ L++ D+ + Sbjct: 3 QILVVDDHALIRKGLKQLLEDT-PDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKH 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E S+ ++ + + V L ++ + L+K +R Sbjct: 62 ---GIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYR--SVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + IS +L + S L+ E + L L+ G +++I+ ++ S K Sbjct: 119 LSGKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPK 178 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWI 208 T+S ++ + ++ +NAE + Sbjct: 179 TVSVYRSRMLAKMTFTNNAEAIHYA 203 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 20/242 (8%) Query: 3 PGCCK-NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADL 59 P K V+ P+M+ GL+ ++ P+ E+I A+ + R LVIAD+ Sbjct: 37 PATTKTRIYVVDDHPLMRMGLRAMINGE-PDMEVIGEAADSATATAEIMKLRPDLVIADI 95 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 + S E ++ + I V + A+ +L + + ++ Sbjct: 96 SLRGN---SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVL 152 Query: 120 KTVRSGNTHAERISAMLTSPAMTETHDFS------YRSVILTLSERKVLRLLGKGWGINQ 173 +R +S + + + D + L+ E +++ L+G+G + Sbjct: 153 DAIRRARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTRE 212 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI-------NSAQGARELNLPSVYGDA 226 IA+ L S KT+ + R+L + + ++ + +A G + P Sbjct: 213 IAAKLFLSIKTVETHRVHIKRKLNLANATQLVQFCVRWVEENKAAAGVGAIAEPPAALQQ 272 Query: 227 AE 228 A Sbjct: 273 AG 274 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 11/208 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ +++ G++ + F + +++ A+ + +++ D+ Sbjct: 6 KVLLVDDHDIVRIGVRSFL-GSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMP--- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + + S + + + L + L++ +R Sbjct: 62 VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRV 121 Query: 126 NTHAERISAMLTSPAMTETHDF-----SYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + ++ + ++E + LT E L+L+ KG IA + Sbjct: 122 HRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFV 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S T+ S + +L + + E + Sbjct: 182 SEATVRTHMTSILSKLHLANRVEATLYA 209 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 71/210 (33%), Gaps = 12/210 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 + +V+ V+ GL ++ + E+ L + + +V+ DL+ + Sbjct: 4 SVLVVDDHAVLGKGLSMLL-NSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + + + ++ + + L+ +RS Sbjct: 63 ---GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI-----LTLSERKVLRLLGKGWGINQIASLLKK 180 + T + + +S L+ E++VL+L+ G+ +IA L Sbjct: 119 YQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYI 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 S KT+ +L ++ +E+ + Sbjct: 179 SIKTVETHIARIKEKLGLNRRSELVRYAMR 208 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 8/208 (3%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSAS--AEDLTLLQLRRSGLVIADLAGESEDP 66 ++ V++ G+++ + T P+ ++ A +E +L+ +++ DL Sbjct: 4 VVLCDDHAVLRRGIRDTL-TEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPG--- 59 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 RS E SL I + + A+ L + L++ VR+ Sbjct: 60 RSGLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVM 119 Query: 127 THAERISAMLTSPAMTETHDFSY--RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + ++ + + L+ E + L + G ++ IA L S KT Sbjct: 120 KGRKYLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKT 179 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +S ++ + +L + +NAE+ + Q Sbjct: 180 VSVYRSRVLEKLKLSNNAELTVYAIRNQ 207 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAG 61 G IV+ +++AG + V+ P++E++ AS+ E + L + R +V+ DLA Sbjct: 8 GGPVRLIVVDDHDLIRAGFRLVLEQE-PDFEVVGEASSGREAIELCRRLRPDVVVMDLAM 66 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 E + ++ ++ + + + +E L A + P+ ++ Sbjct: 67 PG---VDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISA 123 Query: 122 VRSGNTHAERISAMLTSPAMTETHDF------SYRSVILTLSERKVLRLLGKGWGINQIA 175 +R + ++ L + + + + LT ER+VL L+ +G +IA Sbjct: 124 LRRLLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIA 183 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 L S T + + +R+L + + A Sbjct: 184 RELVISRGTAKSHVQNIIRKLGVSDRTQAVARAFELG 220 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 7/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ + G++ ++ E+ +S E L LL+ R+ +V+ D+ Sbjct: 3 RIALVDDHRLFLEGIRSILDREI-GLEVHASVGQGVELLNLLKTTRADVVLTDIRMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + +LL L E LV+ + + Sbjct: 60 -MDGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTV 118 Query: 126 NTHAERISAMLTSPAMT-ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S ++ + SV LT ER+VL L+ +G QIA LK S T Sbjct: 119 ARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 I + + +++ I SN + + G Sbjct: 179 IDTHRKNIHKKMGIRSNIGLLKAASKWLG 207 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 77/209 (36%), Gaps = 6/209 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 ++ +M+ G+ +++ + P+ ++ + + +++ D++ Sbjct: 4 RVVLADDHVLMRQGVSQMLNAN-PDISVVGECDDGVALIAAVLKLSPDVILMDISMPR-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S ++SQ + + + + + + E+LV+ ++ Sbjct: 61 -MSGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + LT + + +LT ER+V L+ G +IA LL S KT Sbjct: 120 AANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTA 179 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 +++ ++L + S+AE+ A Sbjct: 180 ENHRSNIYKKLNLSSSAELIRMAGKAGLL 208 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 71/208 (34%), Gaps = 9/208 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 ++I +++ GL + P+ E+I AS L +++ DL + Sbjct: 3 RVLLIDDHEMVRMGLAAFLEA-QPDIEVIGEASDGSEGVRLAVELSPDVILMDLVM---E 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + + + S + ++ + L + +R+ Sbjct: 59 GMDGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAA 118 Query: 126 NTHAERISAMLTSPAMTETHDFSY---RSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 + ++ + + ++ LT E ++L L+ +G +I L + Sbjct: 119 SKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITI 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINS 210 KT+ + + +L + + + + Sbjct: 179 KTVKTHITNILSKLDVSDRTQAAVYAHR 206 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 9/207 (4%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDP 66 +++ V++AG + ++ P E++ A + L R +++ DL+ Sbjct: 7 VMLVDDHAVVRAGYRLLLSGT-PNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPG--- 62 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + S+ + V L ++ E LV+ V Sbjct: 63 IGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIA 122 Query: 127 THAERISAMLTSPAMTE---THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + + + + + L+ E V LL KG+ ++A L+ K Sbjct: 123 SGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYK 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T++ +L +++ AEM Sbjct: 183 TVANYSTLIKSKLGVNTTAEMARLAYQ 209 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 80/205 (39%), Gaps = 9/205 (4%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDP 66 +V+ + + G + ++ + + +++ A++ + L + R +V+ D+ Sbjct: 8 VLVVDDHTLHRDGTRRILEQ-YDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPG--- 63 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + E + ++ + + + + A LS P LV+ VR+ Sbjct: 64 MNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVA 123 Query: 127 THAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 + L + + + S + LT ER VLRLL +G QIAS L S +T+ Sbjct: 124 GGNSVLQPTLMAALLAKR---SSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVE 180 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSA 211 + +L + S E SA Sbjct: 181 RHCDRIYGKLGVTSRTEAVVRAISA 205 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 12/207 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPR 67 +V+ + + GL ++ E++ A L +V+ D+ R Sbjct: 2 LVVDDQELFRRGLTMLL-GTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMP---KR 57 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S E ++ + + + E + + L IE + + VR Sbjct: 58 SGIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVAD 117 Query: 128 HAERISAMLTSPAMTETHDFSYRSV------ILTLSERKVLRLLGKGWGINQIASLLKKS 181 IS + + E S LT E +VLRL+ KG +IA L S Sbjct: 118 GQSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFIS 177 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWI 208 T+ + + +L +HS E + Sbjct: 178 ENTVKNHVRNILEKLQLHSRMEAVMYA 204 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 87/218 (39%), Gaps = 21/218 (9%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--------RRSGLVIADLAG 61 +++ +++ G++ ++ EII A+ + L +L L++ D++ Sbjct: 1 MLVDDHSIVRDGIRLLLEQA-DGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISL 59 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 S + + Y+ + + + + + + + + ++K Sbjct: 60 PG---MSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKA 116 Query: 122 VRSGNTHAERISAMLTSPAMT---------ETHDFSYRSVILTLSERKVLRLLGKGWGIN 172 +R+ + + S+ + S ++ + H + R L+ E+++L+ L G Sbjct: 117 IRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSR 176 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 +IA L+ S +T+ + + MRRL + + AE+ Sbjct: 177 EIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVE 214 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 13/215 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 I+ V++ GL+ ++ + P++ ++ A+ + L L++ + +++ DL+ Sbjct: 5 RIILADDHTVLRTGLR-LLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPR-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E L S+ +EI + + E + + L +R+ Sbjct: 62 -VSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAIRTV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIASLLK 179 + +S + + + +LT ER+VL+LL +G + QIA LL Sbjct: 120 ASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLH 179 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S KTI K M +L + +++ + Sbjct: 180 LSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 9/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +++ +++ GL ++R +++ A + L++ R LVI DL Sbjct: 6 RVVLVDDHSLVRRGLAVLLRLDGRH-DVVGEAGTGEAAVPLIEAERPDLVILDLNMPG-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + ++ + + + L L + L + S Sbjct: 63 -IDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++A + + E+ R V LT ER+VL+L+ G + +A L S T Sbjct: 122 LRGQRYLAAAIDRARLQESR---MRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTA 178 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + + + M++L +H+ E+ S Sbjct: 179 TRHRANLMQKLNVHNQVELVRIAASQG 205 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 11/214 (5%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEI--ISSASAEDLTL--LQLRRSGLVIADLAGE 62 K +++ +++ GL ++ + + A + + L L+ R LV+ D+A Sbjct: 2 KRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAMP 61 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 E + + + + + A+ L + L+ E + L+ V Sbjct: 62 ---ELGGLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAV 118 Query: 123 RSGNTHAERISAMLTS----PAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 +S L++ A+ + L+ E ++LR L G + IA L Sbjct: 119 GQLLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDL 178 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + S KT+S K +L H++ ++ A+ N+ Q Sbjct: 179 ELSIKTVSTYKARLFAKLGFHNDVDLIAYANNHQ 212 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 215 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 9/209 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS-AEDLTLLQLRRSGLVIADLAGESEDP 66 ++I ++ L + ++ + + + E + ++ R +V+ DL+ + Sbjct: 20 RVLIIDDHALLGESLARFLGSN--DMQAVWCGDLVEAMQSIRDRSWSVVLLDLSMPRGN- 76 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 + + + ++ + + A+ L A L+ + LV+ ++ Sbjct: 77 --GLDLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVV 134 Query: 127 THAERISAMLTSPA---MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 ++ + M E L+ E +V L +G +NQ+A L S K Sbjct: 135 HGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCK 194 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+S K M +LA+ ++A++ + Sbjct: 195 TVSTHKTRLMHKLALDNDADLVRYAMHQG 223 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 73/218 (33%), Gaps = 13/218 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGES 63 +++ +M+ GL+ ++ E++ A+ L +L R +V+ D+ Sbjct: 4 PVRVMIVEDQALMREGLRTLL-DLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPR 62 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 + L ++ E+ + + + L + P E L + Sbjct: 63 ---MDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIE 119 Query: 124 SGNTHAERISAMLTSPAMTET-------HDFSYRSVILTLSERKVLRLLGKGWGINQIAS 176 + + +T ++E S L+ E +VLRL+ G +IA Sbjct: 120 KVHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIAR 179 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 L + T+ +S +R+L + + Sbjct: 180 ALYITEGTVKNHISSILRKLGFRDRTQAALYALERGWI 217 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 12/215 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 N +++ +++ G++ ++ P+ ++ AS + + ++ +V+ D+ Sbjct: 3 NIVLVDDHALIREGIRSLLE-FTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPR-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E ++ + E V + + S VE L L + L +R Sbjct: 60 -MTGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRV 118 Query: 126 NTHAERISAMLTSPAMTETH------DFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + + + LT E +V+RL+ +G +IA++L Sbjct: 119 ANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLG 178 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + T+ Q ++ + +L + Sbjct: 179 TAEGTVKNQTSNILAKLGVRDRTRAVLRAMELGCL 213 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 80/217 (36%), Gaps = 14/217 (6%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGES 63 K ++I P+ + GL+ + P+ ++ A E L L Q L + D++ Sbjct: 4 PKRILIIDDHPLYRDGLRARL-DTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPD 62 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 S E + ++ + + + + +S E +++ + Sbjct: 63 G---SGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIE 119 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSV--------ILTLSERKVLRLLGKGWGINQIA 175 + + + + L+ + D S R L+L E++V+RLL +G +IA Sbjct: 120 TVLSGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIA 179 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 + L S KT+ + + M +L I S Sbjct: 180 AKLFVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLG 216 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 11/216 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ + +AGL V+ P E++ A L + LV+ DL Sbjct: 15 RVLIVDDHELARAGLAAVLA-CEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMP--- 70 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + I + + ++ +E L A L ++ VR Sbjct: 71 VIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQV 130 Query: 126 NTHAERISAMLTSPAMTETH-----DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 ++ L + D + LT E++VLRLL +G +IA L Sbjct: 131 LRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELII 190 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 S T+ + +L + + R+ Sbjct: 191 SPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLVRD 226 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 11/201 (5%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGE 62 +V+ V+++GL + + ++ A + Q +V+ DL Sbjct: 5 KPIRILVVDDHHVVRSGLAASL-GLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLP 63 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + L ++ + + + + L E L+ + Sbjct: 64 GAN---GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 123 RSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 R+ +SA L + ER+VL+L+ +G +IA+ L S Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV-----SDREREVLQLIARGKANKEIAAALGISE 175 Query: 183 KTISAQKNSAMRRLAIHSNAE 203 +T+ ++ ++ + A+ Sbjct: 176 ETVKRHASNLFVKMGVADRAQ 196 >UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1 Tax=Bordetella avium 197N RepID=Q2L102_BORA1 Length = 231 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 5/228 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 I+ P + AG++ +FP E++ A S E ++LL+ +V+ D A Sbjct: 4 RIILADDHPALLAGIQHQFS-NFPTLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGR 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L Y I + + + + EL +L+ V +LV + + Sbjct: 63 FSDGMALILYLRRIYPNIKLIVFTAMDNGAISQELAKLGVHAVLNKVNDTNHLVSAIHAA 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + L+ E +V+RL G + +IA L ++ +TI Sbjct: 123 YAGSTYYRPNQART--PRPEAEQSEFKPLSRRELEVIRLYISGLSVQEIADQLHRTKQTI 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAE 233 S+QK+SAMR+L I +A+++ + A + ++ S +A Sbjct: 181 SSQKSSAMRKLDITRDADLFRFAYEISAASQEDISSSLLQRPGLESAV 228 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 11/213 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL---QLRRSGLVIADLAGESE 64 +++ +++ G+ ++ + E+I+ A + L + +V+ D+ Sbjct: 7 KVMLVDDHAMLRHGMAMMI-NMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL--- 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S E S+ + + +F+ A L + EP E L+ + Sbjct: 63 KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAIHE 122 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVI----LTLSERKVLRLLGKGWGINQIASLLKK 180 +S + + LT SE +VL L+G+G +IA LL + Sbjct: 123 VLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLLCR 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 S KTI + + +L + A++ + Sbjct: 183 SIKTIETHRFNIRVKLHLKDGADLIRYATRWIS 215 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 8/211 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 +++ P+++ G++ ++ ++E++ + LL+ R +V+ DLA + Sbjct: 3 RIVLVDDHPILRHGMRTLL-DTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + V L + L L +R+ Sbjct: 62 --DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTA 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S + S M LT E +VL LL G Q+ L S T+ Sbjct: 120 RDGGSALSPAVASRLMDRMRAPQ---ESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 N +L + + A + R Sbjct: 177 KTHVNHIFTKLGVDTRAAAVSRAMKEGLIRL 207 >UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobacteriaceae RepID=YJJQ_ECO57 Length = 241 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA Sbjct: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLA 60 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK Sbjct: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK Sbjct: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH Sbjct: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSH 240 Query: 241 S 241 S Sbjct: 241 S 241 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 75/216 (34%), Gaps = 12/216 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR------SGLVIADLAG 61 +++ +++ GL+ + P++E+++ A + + L +++ DL Sbjct: 8 KVMIVDDHDMVRTGLRTYL-MLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 E LI +Y + + + S + + + + E L+ Sbjct: 67 PG---MDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYA 123 Query: 122 VRSGNTHAERISAMLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + ++A ++ LT E++VL L+ +G +I L Sbjct: 124 LHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELH 183 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S KT+ ++ + + + ++ + + Sbjct: 184 ISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWVK 219 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 18/222 (8%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 ++ ++ G+ + P++E++ A + + + +V+ DL Sbjct: 4 KILLADDHQIVLKGISFFLA-MQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMP--- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + Q+ I + + S + S V L + + L + +RS Sbjct: 60 IMDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSA 119 Query: 126 NTHAERISAMLTSPAMT------------ETHDFSYRSVILTLSERKVLRLLGKGWGINQ 173 ++ ++ ++ + + LT E +VL LL KG Sbjct: 120 YKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKD 179 Query: 174 IASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 IA L + KT+ +S + +L + + + + Sbjct: 180 IAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLFQNK 221 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 77/213 (36%), Gaps = 7/213 (3%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDP 66 +++ +++ G + +++ P ++++ A L + + LVI DL Sbjct: 7 ILLVDDHAIVREGYRALLQQ-QPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPG--- 62 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E + + + AV+ + ++ P E L++ Sbjct: 63 LGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVL 122 Query: 127 THAERISAMLT-SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +SA + A++ + + +LT E ++LRLL IA++L S KT+ Sbjct: 123 QGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTV 182 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGARELN 218 + + +L + S+ E+ Sbjct: 183 ANTRYLIKAKLGVASDIELVLVALRQGILGAEG 215 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 79/208 (37%), Gaps = 15/208 (7%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ ++ G+K ++ E++ A L + + L+I D+ + Sbjct: 6 RVVLADDHVFVRDGIKSLLENE-ANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLT 64 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L S+ + + + ++ + L E +K + + Sbjct: 65 ---GIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAV 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI---------LTLSERKVLRLLGKGWGINQIAS 176 ++ + S ++S +++ + + +T E+++L LL G G +IA Sbjct: 122 SSGGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAE 181 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEM 204 L+ S +T + + M++L + + E+ Sbjct: 182 ALEISKRTAEVHRFNLMKKLKVKNLMEL 209 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 69/207 (33%), Gaps = 11/207 (5%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIAD 58 M ++ + + GL ++ PE ++++ A + + L + + + + D Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRD-PEMQVVAQAENGEQVIALFEEHQPDVTLMD 59 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 L ++ + + + + + L L + L Sbjct: 60 LRMP---EVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDEL 116 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + +R+ + + I + + + + L+ E +VLR L +G IA L Sbjct: 117 LNAIRTVHRGHKYIPPDVGAKLVQRLSNPE-----LSERELEVLRSLAQGMSNADIADAL 171 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMY 205 T+ + N + +L + + Sbjct: 172 SIGEGTVKSHVNRILNKLDVSDRTQAV 198 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 12/228 (5%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIAD 58 M ++ +++ G +E+++ ++ AS + +V+ D Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRE-SGMMVVGEASDGVEAVEMSMKVHPDVVVMD 59 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 +A + E + + + + + +L A+ L L Sbjct: 60 IAMPRLN---GIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQL 116 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSV------ILTLSERKVLRLLGKGWGIN 172 ++ +R+ + T + + + + ++ LT E +VL++ +G Sbjct: 117 LEAIRAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNK 176 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 IA L SN+TI ++ ++L++ S E + +LP Sbjct: 177 DIADQLYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGWFIMEDLP 224 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 3/205 (1%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLA 60 P +++ +++ GL+ V+ P+ E++ AS+ E L ++ +V+ DL Sbjct: 16 PTSVVKLVLVDDHAILRQGLRSVLERE-PDLEVVGEASSMQEALAVVGDVAPDVVLMDLK 74 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + L + + + + + V + + LV+ Sbjct: 75 LSAASDYEGLALCAQLSAADGTMGLLVLTTFLDEQLVVRAIHAGARGYVVKDVDTTELVR 134 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +R+ + + S + + + LT E +VL+LL KG +I L Sbjct: 135 AIRAVSRGESAFDSRSASAVIRSLNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFI 194 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMY 205 S T+ ++ MR+L + AE Sbjct: 195 SATTVKFHVSNIMRKLDVGRRAEAV 219 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 78/218 (35%), Gaps = 17/218 (7%) Query: 1 MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIAD 58 M ++ + + GLK+++ + + A + + ++L + +++ D Sbjct: 4 MDENKTIRILLADDHALFRQGLKKIL-DMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMD 62 Query: 59 LAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENL 118 + + E + E + + E++ A L L Sbjct: 63 INMPLLN---GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTL 119 Query: 119 VKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVI-----------LTLSERKVLRLLGK 167 V+ ++ N I +T + E + + S LT E+++L L+ + Sbjct: 120 VQAIQEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQ 179 Query: 168 GWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMY 205 G+ +I+ L S KT+ ++ +R++ + + Sbjct: 180 GYTNKEISKELYISEKTVKNHVSNILRKMDVTDRTQAV 217 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 80/206 (38%), Gaps = 11/206 (5%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESEDPR 67 I+ + G+++++ + ++++ A E L L +V+ D+ Sbjct: 5 IIADDHELFLEGVRDILSRE-DDLDVLALARTGQEALELTLQHHPDVVVMDVTMP---KM 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 + E + S ++ + + + E+L + E L++ + ++ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 128 HAERISAMLTSPAMTE-----THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 +S + S + + R+ +L+ ER+VL LL KG ++AS L S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWI 208 T+ + M +L + AE+ + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFA 206 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 78/204 (38%), Gaps = 7/204 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 I+ +++AG++ ++ T P ++I + + E ++ +Q + +V+ D+A Sbjct: 5 RIILADDQLLIRAGIRAIVET-LPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMPGP- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E ++ + + S + L L + L++ + Sbjct: 63 --SGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMV 120 Query: 126 NTHAERISAMLTSPAMTETHDFSY-RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 +S + + + + LT + ++LRL+ G +IA L S KT Sbjct: 121 LHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWI 208 + ++ M R+ +H + + Sbjct: 181 VEFHRSRLMERIGVHDVTGLTRFA 204 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 9/215 (4%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLA 60 P +++ V++AG + ++ +++ A + + R +V+ D++ Sbjct: 6 PPGPLTLLLVDDHAVVRAGYRRLLEQASRCWQVT-EADSGESAYRACARERFDVVVMDIS 64 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 S E L + EI + A + L A ++ E LV+ Sbjct: 65 LPG---ISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVE 121 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 V+ + + + L+ E ++ RLL +G G +IA LL Sbjct: 122 AVQRIAAGGHYLGPDVR---CRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNI 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 S KT++ + +LA+++ AEM A + Sbjct: 179 SYKTVANYGSGIREKLALNNVAEMTRLAIRAGVIK 213 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 12/213 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 + +++ +++AGL+ ++ Y + A L L++ DL+ Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQM-GYHVAGEARDGREACQLAISLCPDLILMDLSLPG-- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + ++ + I + + E L + ++LV +R Sbjct: 63 -MNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVV 121 Query: 126 NTHAERISAMLTSPAM------TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + +S L + E +LT ER VL+L+ +G Q+ + Sbjct: 122 LLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMN 181 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S KTI + S MR+L I + E+ S Sbjct: 182 LSPKTIEKYRASLMRKLGITNLTELVLIAISMG 214 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 13/228 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 + I++ +M G+ ++R P+ +++ A + E L++ +V+ADL+ Sbjct: 5 SVIIVDDHQLMLEGIASLLRAT-PDITLVAKAQSAKEAFELVKQHNPDIVVADLSMPG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + + E + + E+LV + Sbjct: 62 -VTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRV 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +++ P + L+ E+ VL + G +I+ L S+KT+ Sbjct: 121 HEGENTLTSKGLPPY------EPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTV 174 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI-NSAQGARELNLPSVYGDAAEWNTA 232 ++ M++L + E+ S G + P E +A Sbjct: 175 ETHRSRIMQKLNVTKATELVREAMRSGLGNFDTTPPFTIDPPPERGSA 222 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 79/217 (36%), Gaps = 13/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 +++ +++ G+ V+ + E+I AS E L L+ + LV+ D+ Sbjct: 2 KVLIVDDHLMLRKGVLSVLSNT--DLEVIGEASNGQEALELVPKLKPDLVLMDINMP--- 56 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L Y ++ V + E + L E LV ++R+ Sbjct: 57 VLDGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAA 116 Query: 126 NTHAERISAMLTSPAMTETHDFS------YRSVILTLSERKVLRLLGKGWGINQIASLLK 179 + IS+++ + + E L+ E +VLRL G +IA+ L Sbjct: 117 ISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLY 176 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARE 216 + T+ + +L + + +E + A E Sbjct: 177 VAESTVKNHMRHILEKLHLRNRSEAVGYAIRTGLAGE 213 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 79/209 (37%), Gaps = 14/209 (6%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGE 62 ++ P+ + G+ V+ P+ E+I+ A + + + LV+ D+ Sbjct: 2 KSIRVLIADDHPLFRQGVSSVLANT-PDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 63 SEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTV 122 + E ++S+ R+I+ + + + + + E++++ V Sbjct: 61 DLN---GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAV 117 Query: 123 RSGNTHAERISAMLTSPAMTETHDF--------SYRSVILTLSERKVLRLLGKGWGINQI 174 R+ S+ + S + S LT E +VL LL KG +++ Sbjct: 118 RAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEV 177 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAE 203 A L SNKT+ + + +L + E Sbjct: 178 AETLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 70/203 (34%), Gaps = 6/203 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 + + +++ G+ + T + E++ ++ + + L++ DL E Sbjct: 4 KVLFVDDHEMVRIGISSYLST-QSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMED-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + +I + + S + L + + +++ VR Sbjct: 61 -MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKT 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + + + +LT E ++L L+ KG+ +IAS + KT+ Sbjct: 120 SRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTV 179 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 ++ + +L + + + Sbjct: 180 KTHVSNILSKLEVQDRTQAVIYA 202 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%) Query: 10 IVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDPR 67 +++ + ++GL+ ++ + + AS L ++R + +++ D+ R Sbjct: 5 LIVDDHTIFRSGLRRMLSDE-ADMHVADEASDGASALAKIRSGKFDVILMDINMAG---R 60 Query: 68 SVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNT 127 S + SL ++ E+ + + AV L LS + L+ +R Sbjct: 61 SGLDTLESLRAERPELPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVVG 120 Query: 128 HAERISAMLTSPAMTE--THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S + + + LT E +V+ + +G + + + S KT+ Sbjct: 121 GGRYVSPRSAANLLMQMDRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKTV 180 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S + + +L++ SNAE+ + Sbjct: 181 STYRMRILEKLSLSSNAELVQYAMRNGLL 209 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 14/239 (5%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAG 61 +++ PV++ GL + + P+ + ++ + L + + L + DL+ Sbjct: 15 SRPWKVLLVDDHPVVRDGLAQRIA-LEPDLSVCAACESVSRALREVTVHHPDLAVVDLSL 73 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 S + + ++Y E+ + + L+ + E + ++ Sbjct: 74 PSGH---GLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAA 130 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSY------RSVILTLSERKVLRLLGKGWGINQIA 175 +R + ISA L++ L+ E +VL +G+G + IA Sbjct: 131 IRKVLSGRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIA 190 Query: 176 SLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG--ARELNLPSVYGDAAEWNTA 232 L++S KTI + +L I SN+E+ A + S A Sbjct: 191 QRLERSAKTIETYRQRLKEKLNIESNSELIAHAARWVQEHSSHAATASQRKPRARKAKG 249 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 10/209 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAED--LTLLQLRRSGLVIADLAGESED 65 ++ + + GL ++ T + I + L L++ + + D+ D Sbjct: 3 RVLIADDHVMFRQGLINLLTTA-EDIHIAAECGDGATALELIRSLEPDIAVLDITMPKLD 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S+ +L + + + + + E L+ +R+ Sbjct: 62 GISITRAMGNLGL---ATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTV 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 IS + A+ + LT ER++L L+ G IA L S KT+ Sbjct: 119 AAGGTAISRAIQHAAI----EPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTV 174 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + + M +L +HS AE+ + G Sbjct: 175 NNHRTNLMGKLNLHSTAELVRYSLLTGGL 203 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 7/203 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 +++ +++ GLK + P+ E+++ AS + L + +V+ DL Sbjct: 5 RVMLVDDHEMVRLGLKSYL-NLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP--- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E +L+ ++ + V + S + +L + + ++ +R Sbjct: 61 KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKV 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 I + LT ER++L LL KG+ +IA S KT+ Sbjct: 121 ALGEYAIETEVEKKVEHHKRHP-DLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 ++ + +LA+ + + Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYA 202 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 10/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ +++AGL +++ + E+I AS + L Q + +V D+ Sbjct: 6 RVVIADDEALIRAGLATILQAS-GDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG- 63 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + + L +L + +LV+ VR Sbjct: 64 --DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRA 121 Query: 126 NTHAERISAMLTSPAMTETHDF----SYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + A LT + E + S +LT E + L +G N+IA+ L Sbjct: 122 ALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLE 181 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWI 208 T+ +SAM + H+ ++ W Sbjct: 182 PSTVKTHLSSAMAKTGTHNRVQLVIWA 208 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 70/216 (32%), Gaps = 7/216 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESE 64 +++ V++ GL+ + E++ A+ + L + R +V+ DL Sbjct: 14 VRVLLVDDHAVVRQGLRLFL-GLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMP-- 70 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 L + + + + S ++ + + + + L + + Sbjct: 71 -VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 R+ + + R LT E VL+LL +G IA+ S T Sbjct: 130 AARGEVRLHPEAARRLVRDFRSPEMR-ESLTPKETAVLQLLARGQSNKDIAAEQGVSEAT 188 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 + + + +L + S + + A + Sbjct: 189 VKTHVSRLLSKLGLDSRTQAALYALKYGIASLEGVE 224 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 80/214 (37%), Gaps = 10/214 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESED 65 +++ P+++ G+ + + ++ A + + L + L I D++ + Sbjct: 15 RIMMVDDHPLVREGMARFL-NLQGDLDLCCEAGSVEEALAVVADCNPALAIIDISL---N 70 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E +L +Y + + + A L L E N++ VR Sbjct: 71 GESGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILLAVRRV 130 Query: 126 NTHAERISA----MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +SA L+ + L+ E ++L LLG G+G Q+A L +S Sbjct: 131 LAGDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVADKLNRS 190 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 KTI + S +L + S A++ + R Sbjct: 191 IKTIETHRASLKEKLQLKSGADLVRFAIQWLEDR 224 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 75/211 (35%), Gaps = 9/211 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +V+ +++ G+ ++ +++ A + + +L + + +V+ D+ Sbjct: 3 KVLVVDDHDLVRTGITRMLADI-DGLQVVGQADSGEESLKKARELKPDVVLMDVKMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++ + +I V + LL A ++ + +V+ +R Sbjct: 60 -IGGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLV 118 Query: 126 NTHAERISAMLTSPAMTETHDFS---YRSVILTLSERKVLRLLGKGWGINQIASLLKKSN 182 IS + ++ +L+ E ++ ++ + I+ L S Sbjct: 119 FAGQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSP 178 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 KT++ + +L+I S+ E+ Sbjct: 179 KTVNTYRYRIFEKLSISSDVELALLAVRHGM 209 >UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus RepID=B2G7N1_LACRJ Length = 217 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 79/210 (37%), Gaps = 12/210 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 N +V ++++G+ + P + ++ ++ T +++ + ++I DL+ + Sbjct: 3 NVLVADDHAIVRSGI-SYLVDLQPNFTVVDGTASGTDTYIRVEQGGIDILIMDLSMPPGE 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + ++ ++ + + + + + + P +V ++ Sbjct: 62 --NGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYILKSSPDSEIVNGLKHV 119 Query: 126 NTHAERISA-------MLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + + A + + L+ E++V L+ G+ +I+ + Sbjct: 120 INGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQKM 179 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 S KT+ A K + R+L +H E+ + Sbjct: 180 FISTKTVEAHKANISRKLHLHGRVELVQYA 209 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 7/211 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 +++ +++ G K ++ + +++ A L Q R +V+ DL Sbjct: 4 RVMLVDDHAIVREGYKRLLE-LQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPG-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + + + L ++ LV VR Sbjct: 61 -MGGLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSV-ILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 N +S ++ + D + L+ E +V+RLL G +IA L S KT Sbjct: 120 NQGRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKT 179 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 + +L S+ E+ Sbjct: 180 VHNVHYQIKSKLGTASDFELARMAWQRGWIG 210 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 7/212 (3%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAG 61 G N +V+ ++ GL + +PE +I S + R LV DL Sbjct: 6 GKVINILVVDDHSLIFDGLLGCLA-PYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKL 64 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 + L ++ E+ + + + A E L + P L+ Sbjct: 65 PG---MGGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAA 121 Query: 122 VRSGNTHAERISAMLTSPAMTETHDFSYRS-VILTLSERKVLRLLGKGWGINQIASLLKK 180 ++ I L + +LT E++VL+L+ +G IA L Sbjct: 122 IKCVCKGKNFIDPSLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVI 181 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 KT+ + + MR+L H+ AE+ W+ Sbjct: 182 GLKTVETHRMNLMRKLNAHNVAELMHWVQRLG 213 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 79/209 (37%), Gaps = 3/209 (1%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ P + AG++ V+ EI+ A S E ++ L+ +++ D + Sbjct: 7 RILIADDHPAVLAGIESVLEDKHE-IEIVGRAKNSTEIISFLKKNECDVLVTDYSMPGGA 65 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + ++ + V + L ++ + + +L+ + + Sbjct: 66 YGDGLVMLNVIRKRFPSVKIVMLTMIENIGIIKSLTNQGIYRIVHKTDSLGSLLPAIYAA 125 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 T + IS + E S+ L+ E +VL L G +++IA L +S KT+ Sbjct: 126 YTDGQFISPSASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTV 185 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S K + M +L I + ++ + Sbjct: 186 STHKVAVMNKLGIRKDIDLIRYGIEMGWI 214 >UniRef50_A5FQU5 Two component transcriptional regulator, LuxR family n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU5_DEHSB Length = 209 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 7/204 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 N +++ P+++AG+K ++ + + A T L+ L++ DL Sbjct: 3 NILIVDDHPIVRAGVKTILNAERGMFTL-DEAQNAKETKLKISANNYDLILLDLTLPDSQ 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 ++ + ++ + + + + + +S L+K +R Sbjct: 62 GLNLLKDIKTIKKHTP---ILVLSVHPEEQYGIRCIKAGASGFISKESAPFELIKAIRKV 118 Query: 126 NTHAERISAMLTSPAMTE-THDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 IS L + R + L+ E + + +G + ++A K S KT Sbjct: 119 QAGGRYISPALAEIMACQIFDKDGPRHLCLSDREFDIFIGIAQGLRVTELAERFKLSPKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWI 208 I + + ++ + SN E+ + Sbjct: 179 IYTYREHVLTKMGLSSNVELARYA 202 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 80/221 (36%), Gaps = 11/221 (4%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESE 64 K + +++ GL++++ + P+ +AS + L L+ + ++ D++ Sbjct: 19 KKIAFVDDHTMLRDGLQKLVES-QPDLCCYWTASNTQDALQQLEQGKPDMLAVDISLPG- 76 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 R+ E ++ + ++ + + A +L + L++ +R+ Sbjct: 77 --RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRN 134 Query: 125 GNTHAERISAMLTSPAMTETHDFSYR-----SVILTLSERKVLRLLGKGWGINQIASLLK 179 +S +++ M L+ E +V +L+ +G QI L Sbjct: 135 VLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDALN 194 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 S KT+ + +L + A + + ++L Sbjct: 195 ISVKTVEVHRAHIREKLKLEDGASVLRYAVRWAERQKLGTD 235 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 7/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 N ++ V+++G +++ + +++ ++ L + + + D+A E Sbjct: 12 NVALVDDHIVVRSGFAQLLA-LENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE- 69 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S L Q + + + + L L+ E LV+ VR Sbjct: 70 --SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVV 127 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ + A A+ + LT ER++ LL G + IA L+ S+KT+ Sbjct: 128 SSGGIYLCADALH-AIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTV 186 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + + +L S E+ + Q Sbjct: 187 HVHRANILSKLQCESTVELVHFALQHQLL 215 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 77/207 (37%), Gaps = 11/207 (5%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDP 66 +++ +++ LK+ + P +++ A L + +VI D+ + Sbjct: 8 ILLVDDHDILRQSLKKALE-EKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPDLN- 65 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E +IS+ +I + + ++ L +E+L + Sbjct: 66 --GIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVA 123 Query: 127 THAERISAMLTSPAMTETHDFSY-----RSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + + + M + LTL ER V++L+ +G+ +I+ L S Sbjct: 124 SGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNIS 183 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWI 208 +T+ + + M +L IH+ A + + Sbjct: 184 KRTVDVHRTNTMNKLKIHTIAGLTRFA 210 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 77/209 (36%), Gaps = 10/209 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 + +++ +M+ GL+ ++ ++ A + R +++ D+ Sbjct: 7 SILIVEDQTLMRQGLRTIL-DLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMP--- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E ++I+ + + + + + + + L P E L++T+R Sbjct: 63 VMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRV 122 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI----LTLSERKVLRLLGKGWGINQIASLLKKS 181 + I + S + E R+ L+ ER+VL LL +G +IA L + Sbjct: 123 HAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSIT 182 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINS 210 T+ ++ + +L + + Sbjct: 183 EGTVKNHVSNILAKLQAENRTQAANIARR 211 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 85/214 (39%), Gaps = 7/214 (3%) Query: 5 CCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSAS-AEDLTLLQLRRSGLVIADLAGES 63 C+ +V+ P+++ G++ V+ + ++ +A AE R LV+ D+ Sbjct: 6 KCERVLVVDSHPIVRDGIEVVLGKAYAGIDVDGAADMAEASDRCGRDRPDLVLLDVMLPG 65 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 EDP ++ + + +V + ++A + + + L + +V+ +R Sbjct: 66 EDP---LPAMGEILRAHPGLRFVVFTALGSEARAADAIRFGASGYLLKWCSPDGIVQAIR 122 Query: 124 SGNTHAERISAMLTSPAMTETHDF---SYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 I L + + LT E++VL+L+ G +IASLL Sbjct: 123 RVMAGRVHIDPSLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLLNI 182 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S KT+ + M++L + A + W A Sbjct: 183 SPKTVDCHRQRLMQKLGARNVATVIHWAYRYGYA 216 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 76/221 (34%), Gaps = 22/221 (9%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ V++ G++ ++ + +I+ AS D LL + +++ D+ Sbjct: 4 RILIADDHSVVRKGIRMLLEDET-DIQIVGEASDGDEAIDLLASIGTDVLLLDITMPR-- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + +Y + + S V+ + A L +E +++ VR+ Sbjct: 61 -MSGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRS----------------VILTLSERKVLRLLGKGW 169 +S + + +T E +VL L G Sbjct: 120 VDGDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGM 179 Query: 170 GINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 +IA S T++ Q+ S +R+ + + A++ Sbjct: 180 SSPEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLALE 220 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 11/211 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADLAGESED 65 + + PV+ G ++++ P+ +I A+ + L + LV+ DL Sbjct: 17 RLLFVDDHPVVLDGYSLMLKS-QPDLDICGLATNAGDAVQLFEKEHPDLVVMDLNLPG-- 73 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 RS + L++ + A L ++ L+ +R Sbjct: 74 -RSGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRV 132 Query: 126 NTHAERISAMLTSPAMTETHDFSY-----RSVILTLSERKVLRLLGKGWGINQIASLLKK 180 +S L + L+ E +V L G+G +I + L Sbjct: 133 LGGNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGAKLNL 192 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 S KT+S ++ +++ ++AEM Sbjct: 193 SPKTVSVHRDHIKQKMEFGTSAEMIRQAVRW 223 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 11/211 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESED 65 + +I V++ GL V+ + E+ SA + L +L ++I DL+ Sbjct: 5 SVFIIDDHAVVREGLAMVINQE-ADMEVCGSADDGPVALQKLFNIEPDIIIVDLSL---T 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++ ++Y I + + R A + + + E +++ +R Sbjct: 61 TSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEALRKI 120 Query: 126 NTHAERISAMLTSPAMTETH-----DFSYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 S +T + + + LT E +V +++G G+ QIA+ L Sbjct: 121 IKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATKLNL 180 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 S KTI A + S +L + S E+ + Sbjct: 181 SVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 9/220 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ V++ GL+ ++ E +++ + L + +V+ DL Sbjct: 4 RVLIADDHAVVRQGLRMIL-GLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMP--- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + E+ V + S + + + L ++L V++ Sbjct: 60 VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAA 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 +S S M + + S LT E +VL +L +G +IA L+ +T+ Sbjct: 120 AAGQIHVSPAAISRLMGQVREPSGP-EQLTERETEVLTMLARGKANKEIARDLRIGQQTV 178 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQG--ARELNLPSVY 223 + + +L +HS + + + A EL P Sbjct: 179 KTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELTPPEAL 218 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 12/194 (6%) Query: 28 THFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHW 85 P+ E++ A + L + + +VI D++ S E + E Sbjct: 3 QSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPD---MSGIEATRLIKEAVPETRV 59 Query: 86 VFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETH 145 + + +E L + +LV +R+ + +T + Sbjct: 60 IGLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYV 119 Query: 146 DFSYR-------SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAI 198 R LT ER++L L+ +G +IA L S KT+ +++ + +L I Sbjct: 120 SRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGI 179 Query: 199 HSNAEMYAWINSAQ 212 H E+ + Sbjct: 180 HDRTELVRYAIRQG 193 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 78/209 (37%), Gaps = 8/209 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +V+ +++ G+ ++ PE E+I A + + + ++ +V+ D+ + Sbjct: 3 KVLVVDDHDLVRMGISRMLADD-PEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPN-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L ++ + + S S LL ++ P++ ++K ++ Sbjct: 60 -IGGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKV 118 Query: 126 NTHAERISAMLTSPAMTET--HDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 ++ S+ + + L+ E++V ++ QIA L S K Sbjct: 119 YQGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVK 178 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T++ + ++ + S+ ++ Sbjct: 179 TVNTYRYRIFEKVGVDSDVKLTHLAMRHG 207 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 79/210 (37%), Gaps = 9/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISS---ASAEDLTLLQLRRSGLVIADLAGESE 64 N +I V+++G +++ + +++ A+ ++LL+L + + D+A E Sbjct: 5 NVALIDDHIVVRSGFAQLLS-LEGDIQVVGQYASAADAGVSLLKLN-VDVAVMDIAMPDE 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S L + + + + L L+ E LV+ VR+ Sbjct: 63 ---SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRA 119 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + A A+ + LT ER++ LL G + IA L S+KT Sbjct: 120 VHAGGSYLCADAM-RALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + + + +L + E+ + Q Sbjct: 179 VHVHRANVLDKLHCATTVELVHFALQHQLL 208 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 11/217 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQL--RRSGLVIADLAGESED 65 ++ + + GL+E++ + I+ AS L Q R +V+ D+ Sbjct: 7 RILLADDHRMFRQGLRELLER-KGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMP--- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L + ++ + + E + L + L+ + Sbjct: 63 EIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERV 122 Query: 126 NTHAERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + + +T E S + LT ER +L LL +G IA L S K Sbjct: 123 HRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEK 182 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLP 220 T+ + + ++L + + + A + P Sbjct: 183 TVGNRLSEIFQKLGVSNRTQA---ALVAVQRGLIAPP 216 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 81/207 (39%), Gaps = 10/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +++ + + L+ + + EI++ A++ TL L L +++ D+ + Sbjct: 4 RVMLVDDHRMFREALRAPLEAE-SDMEIVAEANSGADTLASLDLACPDVLVLDIGLPDLN 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + I ++ ++ V + + E+L + + LV +R+ Sbjct: 63 ---GIEVARTAIRRHPDLRIVALSGFADRIYIEEMLKAGAHGYVVKSSGADELVSAIRAV 119 Query: 126 NTHAERISAMLTSPAMTETHDF----SYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + +S T + + +L ER+VL LL G +IA+ L + Sbjct: 120 AGGSSFLSPEATQVMLRHIQSDADTVAPPPSVLGKREREVLVLLAGGLRSAEIAASLGIA 179 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWI 208 T+ + + ++L ++ A++ + Sbjct: 180 VGTVEVHRRNIKQKLGMNRTADLIRYA 206 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 6/212 (2%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ P+M G + ++ + E++ A S+E +++L +VI D + + Sbjct: 4 RVVLADDHPIMLLGCRLLIEQN--GMEVVGEARDSSELMSILAHVACDVVITDFSMPNTG 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 +L ++ + + + + + +L ++ L VR+ Sbjct: 62 RADGLAMLSTLRREHGALPVIVLTNMANAGLLRAMLNEGVLGIVEKGAEKSELFAAVRTA 121 Query: 126 NTHAERISAMLTSPA--MTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 A ISA L + T S R+ LT E +VLRLL G ++ +L ++ K Sbjct: 122 LRGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRLLASGKSPTEVGQMLHRTIK 181 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 T+S K SA R+L + S+AE+Y ++ + Sbjct: 182 TVSWAKTSAKRKLGLKSDAELYEYVVNLGLNG 213 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 26/248 (10%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESE 64 +++ P+ + G++ + + + +II S+ + L+ +V+ DL + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSER-DIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPN- 62 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 E ++ QY I V + A L A S + L +R Sbjct: 63 --MDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRR 120 Query: 125 GNTHAERI------SAMLTSPAMTETHDFS-----------YRSVILTLSERKVLRLLGK 167 I + +T+ L+ E +VL + Sbjct: 121 VARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIAS 180 Query: 168 GWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAA 227 G IA LK S +T+ +S +R+L+++ + + + P+ ++ Sbjct: 181 GATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGW---IETPATLLESI 237 Query: 228 EWNTAELR 235 E A+ Sbjct: 238 ERRGAQAA 245 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 19/222 (8%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 N I+ +++ G+K ++ + E +I A + LLQ + +++ D+ Sbjct: 3 NVIIADDQKIVREGIKMILS-LYDEINVIGEAENGEELINLLQNFMADVILMDVRMP--- 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + +Y + + + + + + L E ++ +RS Sbjct: 59 IIDGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSV 118 Query: 126 NTHAERISAMLTSPAM-------------TETHDFSYRSVILTLSERKVLRLLGKGWGIN 172 A + +T + E + + + LT E V +L+ +G Sbjct: 119 YNGAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNK 178 Query: 173 QIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 I L + T+ + +L ++S E+ +IN A Sbjct: 179 DICRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGID 220 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 82/211 (38%), Gaps = 5/211 (2%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGES 63 IV P++ G+++ + + P +++ A LL+ +++ D + Sbjct: 2 AIRVIVADDHPLIIFGVRQALASA-PGIRVVADAPDPGALTELLRNVPCDVLVTDFSMPC 60 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 SL ++ + V + V + +++ + + L + Sbjct: 61 GATPDGLAMLTSLRQRFPHVRVVVLTMLENAGLMVSMQDVGVLGIVNKRDDLSELPAVIA 120 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYRSVI--LTLSERKVLRLLGKGWGINQIASLLKKS 181 + +S + H S R L+ E +V+R+ G +++A L +S Sbjct: 121 AAFRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRS 180 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 TIS QK +AMR+L + ++AE++ + Sbjct: 181 INTISTQKTNAMRKLGVSNDAELFDYAQKHG 211 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 13/225 (5%) Query: 3 PGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLA 60 P + P++ +G+K ++ T PE E++ A L + + DL+ Sbjct: 18 PSRL-RVFIADDHPLILSGMKTLLATD-PEIELVGEAVDGPSALRRAIDLDPDVAVFDLS 75 Query: 61 GESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVK 120 + E L + + + + LL A + E LV+ Sbjct: 76 MPGLN---GIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVR 132 Query: 121 TVRSGNTHAERISAMLTSPAMTETHDFSYRSVI------LTLSERKVLRLLGKGWGINQI 174 + + + + A+ + SV L+ E++VL+L G I Sbjct: 133 GIHAVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVI 192 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNL 219 ++ L+ K++ K AM +L S ++ + S N Sbjct: 193 SAKLEVGPKSVETYKARAMEKLGFTSRVDLIRFALSMGWLESTNP 237 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 10/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESED 65 ++ + + G+K ++ + ++++ AS E + L+ LV+ DL+ Sbjct: 1440 RVVIADDHALFRDGIKSLLES--EGFQMVGEASNGQEAVELVHNLSPDLVLMDLSMP--- 1494 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + + + + + + + E + + E + +R+ Sbjct: 1495 VMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNV 1554 Query: 126 NTHAERISAMLTSPAMTETHDF--SYRSVILTLSERKVLRLLGKGW-GINQIASLLKKSN 182 I+ L + E S +LT E+++L+LL G ++ L S Sbjct: 1555 IRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSE 1614 Query: 183 KTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 T+ + + +L + S A++ AW Sbjct: 1615 HTVKYHLRNILSKLHLQSRAQVVAWAVQHG 1644 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 16/232 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +++ P+++ GL ++ P +E++ A L + R +V+ D+ Sbjct: 12 RVLIVDDQPLVRRGLSLILSPD-PSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMP--- 67 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 L + + + + + V L L E+L +R+ Sbjct: 68 VLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTV 127 Query: 126 NTHAERISAMLTSPAMT-------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLL 178 + ++ L + ++ T LT E +V RL+ G I+ L Sbjct: 128 HAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTL 187 Query: 179 KKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWN 230 S T+ S +LA+ A+ + + GD Sbjct: 188 DISLSTVKNYITSIFDKLAVRDRAQAVIVAYE---SGLVTARVAAGDPPGDG 236 >UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N3_NITMU Length = 211 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 8/208 (3%) Query: 11 VISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESEDPRS 68 + + + GL+ ++ + ++ A+ L ++R + + D++ + Sbjct: 7 LADDHRLFRDGLRRILAETT-DIVVVGEATDGLDALKKMRLGGWDVGLLDVSMPG---MN 62 Query: 69 VCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTH 128 E ++ + + + + A+ + T+ L+ P + L+ +R Sbjct: 63 GLEVLQRIMDDDPKHRILMLSTYHEDEYAIRAIRAGTSAYLTKNSPTDLLISVIRRLAHG 122 Query: 129 AERISAMLTSPAMTETHDFS--YRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTIS 186 I L + + S R L+ E VL+L+ G + +I+ LK S KTIS Sbjct: 123 GRYIDPKLAEKLLFDLGPSSTMPRHSALSNRELDVLKLIAVGISLTEISQKLKLSAKTIS 182 Query: 187 AQKNSAMRRLAIHSNAEMYAWINSAQGA 214 + + ++ + +NA++ ++ + Sbjct: 183 TYRARVLEKMGMQNNAQLIRYVAEHKLL 210 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 10/213 (4%) Query: 2 LPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAE--DLTLLQLRRSGLVIADL 59 +P + +++ +++ G + ++ P ++ A + L +V+ D Sbjct: 1 MPEAPISVLLVDDHSLVRRGFRRMLEDD-PAIVVVGEAEDGHQAVQLAGELHPRVVVMDF 59 Query: 60 AGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLV 119 A S + ++ E + + + S L L +V Sbjct: 60 AMPS---MNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMV 116 Query: 120 KTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 V+ + + LT E +VL+L+ G +IA++L Sbjct: 117 AAVKQVAAGKQVLD----RRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLS 172 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S T++ + + M+ L IH+ AE+ + Sbjct: 173 LSANTVAVHRANIMQTLGIHNTAELVVYAIRQG 205 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 73/212 (34%), Gaps = 14/212 (6%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR---SGLVIADLAGESE 64 N ++ V+++G+K+++ I++ A L +R L++ DL Sbjct: 11 NLLLAEDHNVVRSGIKKLLEADEA-INIVAEAINGAQALELIRDNGSIDLLLTDLNMPG- 68 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + + + + V + + + L E ++ ++ Sbjct: 69 --INGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKY 126 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVI-------LTLSERKVLRLLGKGWGINQIASL 177 + I A L+ +++ +V + E ++L L+ +G ++A Sbjct: 127 ISRGGSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADR 186 Query: 178 LKKSNKTISAQKNSAMRRLAIHSNAEMYAWIN 209 L S +T+ + S + + A + + Sbjct: 187 LFISKRTVEGHRQSLTDKTGCRNTAALIRYAM 218 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 8/207 (3%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESE 64 K+ +++ PV+ +++ + + Y I+ + L + R +VI D++ Sbjct: 3 KSVLIVDDHPVVCEAIRKTLESQ--GYTIVGETADGISALNMILSLRPDIVILDVSL--- 57 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 + + ++ + ++S + A+ L + +S EP+ L+K V + Sbjct: 58 EKMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVDT 117 Query: 125 GNTHAERISAMLTSPAMTETHDFSYR-SVILTLSERKVLRLLGKGWGINQIASLLKKSNK 183 + S LT E +VL+LL +G +IA L SNK Sbjct: 118 IVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSNK 177 Query: 184 TISAQKNSAMRRLAIHSNAEMYAWINS 210 T+S K + + +L + S ++ Sbjct: 178 TVSGHKINILSKLGVTSVVDLVNIARQ 204 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 7/204 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQ--LRRSGLVIADLAGESED 65 I+ +MQ GLK + +II+ L + +++ D+ + + Sbjct: 3 RLILADDHRLMQDGLKSRLERE-DNLDIIACVGTGTEALEATLELKPDVLLLDINMPNLN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L + + V + + E LV + Sbjct: 62 ---GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQV 118 Query: 126 NTHAERISAMLTSPAMTETHD-FSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + + + + ++ + L+ E VL+ + G G +IA L S +T Sbjct: 119 AQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWI 208 + + ++L S A + Sbjct: 179 VETHRLRIKKKLGATSTAALVKLA 202 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 7/203 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +V+ PV++ GL ++ ++E + A+ L++ ++ +V+ DL Sbjct: 3 RVLVVDDHPVVRHGLMAMLGWEQ-DFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLP--- 58 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S E + ++ + + L A L E + + +RS Sbjct: 59 QLSGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSI 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + + + + + L+ E VL+LL +G IA L S TI Sbjct: 119 YEGGAALQSGIAARVLKRLATE-PAEDELSQRELDVLQLLVRGESNKAIALSLNISENTI 177 Query: 186 SAQKNSAMRRLAIHSNAEMYAWI 208 + + +L + S AE A Sbjct: 178 KSHVSHIFSKLDVRSRAEAVAVA 200 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 79/213 (37%), Gaps = 12/213 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRR--SGLVIADLAGESED 65 + +++ + + GL ++ + P++ ++ A++ + + + R +V+ D+ Sbjct: 5 SLLLVDDHALFREGLASLLS-YQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPG-- 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + Q E+ V + + + + + L L+ +R Sbjct: 62 -IDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGL 120 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVI------LTLSERKVLRLLGKGWGINQIASLLK 179 IS + + + E ++ I L+ E +VL L+ +IA+ L Sbjct: 121 ARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 S T+ + + +L + S + A+ + Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHG 213 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 71/200 (35%), Gaps = 6/200 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 ++ P + GLK + EI+ ++ + + + + + DL + Sbjct: 3 QVYLVDDHPFVLQGLKAYL-NTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + + + + S + + +E + + + E LV+ +++ Sbjct: 62 ---GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAA 118 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ + M ++ LT E++VL L +G IA L S T+ Sbjct: 119 RRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 186 SAQKNSAMRRLAIHSNAEMY 205 ++ +++L + + Sbjct: 179 KTHVSNILKKLDVKDRTQAV 198 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 10/210 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL--TLLQLRRSGLVIADLAGESED 65 +V P+++ GL V+ P +E++ A + L R +V+ DL Sbjct: 5 RILVADDHPMLREGLSAVL-GTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGT- 62 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L V + E L L + VR+ Sbjct: 63 --GGVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAVRTV 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + I +T+ + E S LT E +VLRL+ +G ++A L S +T+ Sbjct: 120 HAGGSVIPPEITARVLKEMRGESEP---LTPRELEVLRLVARGLTNREVARALFISERTV 176 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGAR 215 +S + +L + + A R Sbjct: 177 KFHVSSLLAKLRAENRTQAVAIARERGLLR 206 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 65/217 (29%), Gaps = 18/217 (8%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGES 63 ++ +++ G+K V+ + E++ A L + + +++ D+ Sbjct: 2 AIRILLADDHALLRQGIKRVL-NFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPG 60 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 L + + + + +ELL L L+K + Sbjct: 61 LTGLD---VAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIH 117 Query: 124 SGNTHAERISAMLTSPA------------MTETHDFSYRSVILTLSERKVLRLLGKGWGI 171 N + L M + R LT E VL + KG Sbjct: 118 MVNEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSN 177 Query: 172 NQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWI 208 I L S KT+ S +L ++ + ++ Sbjct: 178 QDIGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYV 214 >UniRef50_B8IGH6 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGH6_METNO Length = 232 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 83/226 (36%), Gaps = 13/226 (5%) Query: 6 CKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGES 63 C +V P++ G++ ++ H P+ II A A+ L L + + I D+A Sbjct: 8 CTRVLVADAHPLLLRGVQHLL-RHEPDLSIIGEAISGAQALRLASDLQPDIAILDVALPG 66 Query: 64 EDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVR 123 E L + + + A L + E L+ +R Sbjct: 67 LH---GSEIRQRLAERAAGTRVIILSGTEEPICAQRALAAGVCGYVLKRSAPETLLHAIR 123 Query: 124 SGNTHAERISAMLTSPAMTETHDFSYR-------SVILTLSERKVLRLLGKGWGINQIAS 176 + T + + + + R S LT ER+V+RL+ G+ +IA Sbjct: 124 AVRTGGLYLDPTIAGQLVPAGGPPATRTSGIDGFSASLTNREREVIRLIALGFTNKEIAG 183 Query: 177 LLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSV 222 L + K+I + A +L I + A++ + + R + SV Sbjct: 184 KLGITAKSIETYRTRASEKLDIRTRAKIVQYAMAQGWFRTESGSSV 229 >UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTG7_9GAMM Length = 214 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 86/215 (40%), Gaps = 12/215 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSG--LVIADLAGESED 65 + +++ V++ GLK+++ H ++ A+ + Q+R+ LV+ D+ Sbjct: 3 SILLVDDHAVVRNGLKQMLIEHLGSV-VLGEANDAIEAMQQVRKQDWGLVVLDIRLPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 RS + + S+ + + + S AV L+ A +S ++K V++ Sbjct: 60 -RSGVDVLKQIKSEKPHLPVLILSSYPESQYAVRLIQAGAAGYISKDSEETEIIKAVKTA 118 Query: 126 NTHAERISAMLTSPAMT------ETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLK 179 I+ ++ D L+ E ++ L G IA L+ Sbjct: 119 AAGGRYINEIVGGLLANTMSRSFSNADDLSLYESLSDREYQIFLELASGKRAKDIAEKLQ 178 Query: 180 KSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 S KT++ ++ M+++ +NAE+ + N + Sbjct: 179 VSAKTVATHRSRLMQKMGFSTNAELILYANKSGLL 213 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 76/202 (37%), Gaps = 7/202 (3%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 +V +++ + ++ ++I+ A + + + R +V+ D+ Sbjct: 3 KVLVADDHHLVRTSIARML-DSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E ++ +I V + + + A L+ A +S ++ +V+ +R+ Sbjct: 60 -IGGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAI 118 Query: 126 NTHAERISAMLTSP-AMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 IS + +++ L+ E +V ++ ++ I+ L S KT Sbjct: 119 FDGQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 185 ISAQKNSAMRRLAIHSNAEMYA 206 ++ + +L + S+ E+ Sbjct: 179 VNTYRYRIFEKLNVQSDVELTH 200 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 8/197 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLT--LLQLRRSGLVIADLAGESED 65 ++ +++AGL+ ++ H + E++ A+ D L LV+ DL Sbjct: 3 RLLLADDHAIVRAGLRALLE-HEDDIEVVGEAATADAAVALCATTPVDLVLMDLRF--GP 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 S + +L S H + + + + ++ + A L P L+ VR+ Sbjct: 60 GTSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAA 119 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 + +S + S MT + L+ E +VL L+ G +I L S T+ Sbjct: 120 SAGDSVLSPAVASKLMTRVR---RPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTV 176 Query: 186 SAQKNSAMRRLAIHSNA 202 + +L + S Sbjct: 177 KSHLVHIFGKLGVKSRT 193 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 73/207 (35%), Gaps = 10/207 (4%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESED 65 +V+ +++ G+ ++ Y+++ A + + + ++ + +V+ D+ Sbjct: 3 KILVVDDHDLVRMGIVRMLADI-DGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPG-- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E L++ I + + + L+ ++ + + Sbjct: 60 -MGGLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKV 118 Query: 126 NTHAERISAMLTSPAM----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 +S + + ++ L+ E + L+ G +N IA+ S Sbjct: 119 TRGDLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVS 178 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWI 208 KT+++ + +L I+S+ E+ Sbjct: 179 PKTVNSYRYRIFEKLDINSDVELTLLA 205 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 75/213 (35%), Gaps = 15/213 (7%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESEDP 66 ++ V++ G + + H PE ++ A Q+R R +V+ D+ Sbjct: 4 VLIADDQQVVRQGFELFLSGH-PEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG-- 60 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 +++++ + + + E L A L E L V + Sbjct: 61 -DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVA 119 Query: 127 THAERISAMLTSPAMTETHDFSYRSVI---------LTLSERKVLRLLGKGWGINQIASL 177 +S LTS + E + L+ E V++LL +G G N IA Sbjct: 120 EGGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADS 179 Query: 178 LKKSNKTISAQKNSAMRRLAIHSNAEMYAWINS 210 L T+ + ++ ++L + + ++ W Sbjct: 180 LSLEQSTVKSHISNICKKLQVRTRVQIVIWAYR 212 >UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LDE9_RALME Length = 214 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 87/209 (41%), Gaps = 3/209 (1%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSA--SAEDLTLLQLRRSGLVIADLAGESED 65 ++ PV+ G++ + +E++ +A S E L LL + +++ D + Sbjct: 3 QVLIADDHPVVVNGIRRELGDEV-GFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSA 61 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 + ++ + V + + + + +LS + + +L +R+ Sbjct: 62 TGDGLPMLQLIRRRHPAVRIVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAA 121 Query: 126 NTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTI 185 ++ + + + D L+ E +V+R G + +IA +S+KTI Sbjct: 122 FVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKTI 181 Query: 186 SAQKNSAMRRLAIHSNAEMYAWINSAQGA 214 SAQK+ AMR+L + S+ E+Y + + Sbjct: 182 SAQKSMAMRKLGLTSDYELYQYAVTHGML 210 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 76/208 (36%), Gaps = 9/208 (4%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASA--EDLTLLQLRRSGLVIADLAGESE 64 +++ P++ GLK ++ +++ +A+ E + L+ + D+ Sbjct: 3 VRILIVDDHPLVLEGLKSLLADA-EGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPD- 60 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 S + + Q+ E+ + + + + + ++ + L E++++ + Sbjct: 61 --ISGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQ 118 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 ++ LT E++VL L+ +G QIA L S T Sbjct: 119 VQAGGYFMNVQFDQVTPA---TAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTT 175 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +++ + + + + + + A + Sbjct: 176 VNSHRQNLLIKFEVSNTASLIKLAAGLG 203 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 4/204 (1%) Query: 7 KNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR--RSGLVIADLAGESE 64 ++ P++ G++ ++ + I+ A L L +VI D A + Sbjct: 3 VQVLIADDHPLVLLGVRHMLAG-MGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQ 61 Query: 65 DPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRS 124 ++ Y + + + + +LS ++ L + + + Sbjct: 62 PAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAA 121 Query: 125 GNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKT 184 + A + L+ E +V+RL G + IA+ +S KT Sbjct: 122 VYQGRPFVGTH-AGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKT 180 Query: 185 ISAQKNSAMRRLAIHSNAEMYAWI 208 +S K++AM +L + S+ +++ + Sbjct: 181 VSTHKHNAMGKLGLKSDVDLFMYA 204 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 82/206 (39%), Gaps = 11/206 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEII--SSASAEDLTLLQLRRSGLVIADLAGESED 65 +++ P + GLK ++ +E++ + + E + L+ + + +V+ D+ Sbjct: 5 KVLIVDDNPAVLDGLKIILE--LENFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMP--- 59 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E +++ +++ + + + + + L + +++V ++ S Sbjct: 60 VMDGIEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSV 119 Query: 126 NTHAERISAMLT----SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 + + + ++ LT E ++ +L+ +G+ +IA +L S Sbjct: 120 LDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFIS 179 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAW 207 T+ S +++L + + ++ + Sbjct: 180 EGTVRNYITSILQKLNLKNRTQIAVY 205 >UniRef50_UPI00017443C2 hypothetical protein VspiD_13430 n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443C2 Length = 257 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 13/217 (5%) Query: 4 GCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAG 61 +V+ P + G+ E++ +E+ A + + LV+ D++ Sbjct: 25 ARATRVLVVDDHPGFRLGVVEMLHDI-DGFEVCGEAGDSTTAIASFRDLEPDLVVMDISL 83 Query: 62 ESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKT 121 R E ++++ + + + L L + + L Sbjct: 84 PG---RDGIEVTKMMLAERPHTTVLVLTMHDELFYGLRALKAGAYGYLRKDDTLTQLADA 140 Query: 122 VRSGNTHAERISAMLTSPAMTETH-------DFSYRSVILTLSERKVLRLLGKGWGINQI 174 VR +S L + + + + L+ E +V L KG G QI Sbjct: 141 VRHTANRTHYVSPRLLAQLINKLAHTPTVDEEGKPAIQGLSDREMEVFHWLAKGLGTRQI 200 Query: 175 ASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSA 211 A+ L S KTI + +L + + + Sbjct: 201 ATQLCLSIKTIETHRAHIKSKLRMPTAQSIVKLAREW 237 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 25/213 (11%), Positives = 65/213 (30%), Gaps = 11/213 (5%) Query: 8 NGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLL--QLRRSGLVIADLAGESED 65 ++ + + GL ++ + ++ A +L Q + +++ D+ Sbjct: 3 RLLLADDQALFRQGLASLLE-LEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC- 60 Query: 66 PRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSG 125 E + ++ I + + + L L P L +R Sbjct: 61 --DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRML 118 Query: 126 NTHAERISAMLTSPAMTETHDF-----SYRSVILTLSERKVLRLLGKGWGINQIASLLKK 180 + ++ + + + L+ E VL L+G+G +I+ +L Sbjct: 119 HDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHL 178 Query: 181 SNKTISAQKNSAMRRLAIHSNAEMYAWINSAQG 213 + T+ + + L + + W Sbjct: 179 TEGTVKNYVSQLLGSLGVRDRTQAALWAQQYLS 211 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 11/211 (5%) Query: 9 GIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTL--LQLRRSGLVIADLAGESEDP 66 +++ + +++ G+K ++ + E+ I+ AS L ++ +V+ DL Sbjct: 5 VVIVEDLDIVREGIKALLDAN-GEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLP---V 60 Query: 67 RSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGN 126 E + + + + + S L L + L + +++ Sbjct: 61 MEGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVL 120 Query: 127 THAERISAMLTSPAM-----TETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKS 181 IS ++ + D + +L+ E++VL+L+ +G G +A L S Sbjct: 121 AGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCIS 180 Query: 182 NKTISAQKNSAMRRLAIHSNAEMYAWINSAQ 212 +KT+ K + R+L S AE+ + Sbjct: 181 HKTVEKHKANLKRKLGTASTAELVTFAIEHG 211 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.190 0.614 Lambda K H 0.267 0.0584 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,650,008,272 Number of Sequences: 3077464 Number of extensions: 89148900 Number of successful extensions: 336123 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14163 Number of HSP's successfully gapped in prelim test: 12134 Number of HSP's that attempted gapping in prelim test: 286766 Number of HSP's gapped (non-prelim): 29871 length of query: 241 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 116 effective length of database: 655,713,356 effective search space: 76062749296 effective search space used: 76062749296 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 92 (39.5 bits)