BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (200 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Ta... 416 e-115 UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ... 227 2e-58 UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family ... 219 3e-56 UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX 215 5e-55 UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia protea... 196 6e-49 UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX 193 3e-48 UniRef50_A8GJN9 Integrase family protein n=1 Tax=Serratia protea... 187 1e-46 UniRef50_C6NXS4 Fimbriae recombinase n=3 Tax=Gammaproteobacteria... 176 4e-43 UniRef50_C4XNI1 Site-specific recombinase n=1 Tax=Desulfovibrio ... 171 1e-41 UniRef50_A0YRP7 Type 1 fimbriae Regulatory protein fimB n=3 Tax=... 155 5e-37 UniRef50_B7KMC0 Integrase family protein n=2 Tax=Cyanothece RepI... 154 2e-36 UniRef50_C6MXI5 Phage integrase n=1 Tax=Legionella drancourtii L... 152 8e-36 UniRef50_C5V7S5 Integrase family protein n=3 Tax=Proteobacteria ... 145 9e-34 UniRef50_A8ZP48 Phage integrase family protein n=6 Tax=Cyanobact... 140 2e-32 UniRef50_A7BWK3 Type 1 fimbriae Regulatory protein fimB n=1 Tax=... 140 2e-32 UniRef50_Q2RMN3 Phage integrase n=1 Tax=Rhodospirillum rubrum AT... 133 3e-30 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 115 8e-25 UniRef50_D0CZ08 FimB n=1 Tax=Citreicella sp. SE45 RepID=D0CZ08_9... 108 1e-22 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 100 2e-20 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 97 3e-19 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 94 3e-18 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 93 5e-18 UniRef50_B6ZR00 Site-specific recombinase, phage integrase famil... 93 6e-18 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 92 9e-18 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 90 3e-17 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 90 4e-17 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 89 8e-17 UniRef50_B2A5E4 Integrase family protein n=1 Tax=Natranaerobius ... 89 1e-16 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 88 2e-16 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 87 3e-16 UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phy... 87 5e-16 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 86 8e-16 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 85 1e-15 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 85 1e-15 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 85 2e-15 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 84 4e-15 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 84 4e-15 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 84 4e-15 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 83 4e-15 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 83 5e-15 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 83 5e-15 UniRef50_C8SXU7 Type 1 fimbriae regulatory protein FimE n=1 Tax=... 83 5e-15 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 83 6e-15 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 83 6e-15 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 82 8e-15 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 82 8e-15 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 82 9e-15 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 82 1e-14 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 82 1e-14 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 82 1e-14 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 82 1e-14 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 82 2e-14 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 81 2e-14 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 80 3e-14 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 80 4e-14 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 80 4e-14 UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella an... 80 5e-14 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 80 5e-14 UniRef50_C3Q7K5 Tyrosine type site-specific recombinase n=7 Tax=... 80 6e-14 UniRef50_B2JY18 Integrase family protein n=1 Tax=Burkholderia ph... 80 6e-14 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 80 6e-14 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 79 6e-14 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 79 7e-14 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 79 7e-14 UniRef50_Q5LEL4 Putative tyrosine recombinase n=2 Tax=Bacteroide... 79 7e-14 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 79 7e-14 UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax... 79 8e-14 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 79 9e-14 UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadal... 79 9e-14 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 79 9e-14 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 79 1e-13 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 79 1e-13 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 78 1e-13 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 78 2e-13 UniRef50_B2GC24 Integrase n=3 Tax=Lactobacillus fermentum RepID=... 78 2e-13 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 77 3e-13 UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncu... 77 3e-13 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 77 3e-13 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 77 3e-13 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 77 3e-13 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 77 3e-13 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 77 4e-13 UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio v... 77 4e-13 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 77 4e-13 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 77 4e-13 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 77 4e-13 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 77 4e-13 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 77 4e-13 UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga let... 77 4e-13 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 77 4e-13 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 77 5e-13 UniRef50_A4J2M3 Phage integrase family protein n=1 Tax=Desulfoto... 77 5e-13 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 77 5e-13 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 76 5e-13 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 76 6e-13 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 76 7e-13 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 76 7e-13 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 76 7e-13 UniRef50_A0M0Q8 Phage integrase family protein n=3 Tax=Bacteroid... 76 7e-13 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 76 7e-13 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 76 8e-13 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 76 8e-13 UniRef50_B9K431 Phage integrase family protein n=4 Tax=Alphaprot... 76 8e-13 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 76 8e-13 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 76 8e-13 UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ... 75 9e-13 UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae... 75 9e-13 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 75 9e-13 UniRef50_Q2GEQ3 Tyrosine recombinase XerD n=2 Tax=Neorickettsia ... 75 9e-13 UniRef50_B5WFN4 Integrase family protein n=1 Tax=Burkholderia sp... 75 9e-13 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 75 1e-12 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 75 1e-12 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 75 1e-12 UniRef50_Q2JAI1 Phage integrase n=2 Tax=Actinomycetales RepID=Q2... 75 1e-12 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 75 1e-12 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 75 1e-12 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 75 1e-12 UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia ... 75 1e-12 UniRef50_B1FUW0 Integrase family protein n=1 Tax=Burkholderia gr... 75 1e-12 UniRef50_Q01TI9 Phage integrase family protein n=6 Tax=Candidatu... 75 1e-12 UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase f... 75 1e-12 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 75 2e-12 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 75 2e-12 UniRef50_UPI0001B49322 site-specific recombinase, phage integras... 74 2e-12 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 74 2e-12 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 74 2e-12 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 74 2e-12 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 74 2e-12 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 74 2e-12 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 74 3e-12 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 74 3e-12 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 74 3e-12 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 74 3e-12 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 74 3e-12 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 74 3e-12 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 74 3e-12 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 74 4e-12 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 74 4e-12 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 74 4e-12 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 74 4e-12 UniRef50_B9L0I5 Tyrosine recombinase xerD n=2 Tax=Thermomicrobia... 73 5e-12 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 73 5e-12 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 73 5e-12 UniRef50_Q01RK4 Phage integrase family protein n=4 Tax=Bacteria ... 73 5e-12 UniRef50_A4XJF9 Phage integrase family protein n=2 Tax=Caldicell... 73 6e-12 UniRef50_A3M0R9 Site-specific tyrosine recombinase n=1 Tax=Acine... 73 6e-12 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 73 6e-12 UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter ... 73 6e-12 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 73 7e-12 UniRef50_B0T9L5 Integrase family protein n=1 Tax=Caulobacter sp.... 73 7e-12 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 73 7e-12 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 73 7e-12 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 72 8e-12 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 72 8e-12 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 72 8e-12 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 72 8e-12 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 72 8e-12 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 72 9e-12 UniRef50_A6M1R6 Phage integrase family protein n=11 Tax=Clostrid... 72 9e-12 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 72 9e-12 UniRef50_C8NZN0 Integrase/recombinase XerD n=1 Tax=Erysipelothri... 72 9e-12 UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desu... 72 1e-11 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 72 1e-11 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 72 1e-11 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 72 1e-11 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 72 1e-11 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 72 1e-11 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 72 1e-11 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 72 1e-11 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 72 1e-11 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 72 1e-11 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 72 1e-11 UniRef50_A4FYH1 Phage integrase family protein n=1 Tax=Methanoco... 72 2e-11 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 71 2e-11 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 71 2e-11 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 71 2e-11 UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales ... 71 2e-11 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 71 2e-11 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 71 2e-11 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 71 2e-11 UniRef50_A4FWI1 Tyrosine recombinase XerC subunit n=1 Tax=Methan... 71 2e-11 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 71 2e-11 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 71 3e-11 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 71 3e-11 UniRef50_C1XXX1 Site-specific recombinase XerD n=2 Tax=Meiotherm... 71 3e-11 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 70 3e-11 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 70 3e-11 UniRef50_UPI0001C42AAB hypothetical protein BpOF4_04550 n=1 Tax=... 70 3e-11 UniRef50_Q8A4G5 Putative integrase/recombinase n=1 Tax=Bacteroid... 70 3e-11 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 70 3e-11 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 70 3e-11 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 70 3e-11 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 70 3e-11 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 70 3e-11 UniRef50_B1HMM0 Tyrosine recombinase xerC n=2 Tax=Bacillaceae Re... 70 4e-11 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 70 4e-11 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 70 4e-11 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 70 4e-11 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 70 4e-11 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 70 4e-11 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 70 4e-11 UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadacea... 70 4e-11 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 70 4e-11 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 70 5e-11 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 70 5e-11 UniRef50_Q49HK5 Putative integrase/recombinase n=1 Tax=unculture... 70 5e-11 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 70 5e-11 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 70 5e-11 UniRef50_Q2ESR3 Integrase/recombinase n=5 Tax=Bacillus thuringie... 70 5e-11 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 70 5e-11 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 70 6e-11 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 70 6e-11 UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae... 70 6e-11 UniRef50_Q1GW11 Phage integrase n=5 Tax=Alphaproteobacteria RepI... 69 7e-11 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 69 7e-11 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 69 8e-11 UniRef50_C3R440 Phage integrase n=1 Tax=Bacteroides sp. 2_2_4 Re... 69 8e-11 UniRef50_Q65KI2 Hypothetical Lambda integrase-like, N-terminal,D... 69 8e-11 UniRef50_C5V4M0 Integrase family protein n=1 Tax=Gallionella fer... 69 8e-11 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 69 8e-11 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 69 8e-11 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 69 8e-11 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 69 9e-11 UniRef50_A6LE90 Tyrosine type site-specific recombinase n=8 Tax=... 69 9e-11 UniRef50_Q0W2T4 Integrase n=1 Tax=uncultured methanogenic archae... 69 9e-11 UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae ... 69 1e-10 UniRef50_Q989Z0 Integrase/recombinase n=3 Tax=Proteobacteria Rep... 69 1e-10 UniRef50_D1Y3S4 Tyrosine recombinase XerD n=1 Tax=Pyramidobacter... 69 1e-10 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 69 1e-10 UniRef50_B9K3U6 Integrase/recombinase n=5 Tax=Proteobacteria Rep... 69 1e-10 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 69 1e-10 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 69 1e-10 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 68 1e-10 UniRef50_B5Z5W0 Integrase/recombinase n=2 Tax=Bacillus cereus gr... 68 1e-10 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 68 1e-10 UniRef50_Q5SI41 Putative phage integrase/recombinase n=1 Tax=The... 68 2e-10 UniRef50_Q98AE4 Integrase/recombinase n=1 Tax=Mesorhizobium loti... 68 2e-10 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 68 2e-10 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 68 2e-10 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 68 2e-10 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 68 2e-10 UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria... 68 2e-10 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 68 2e-10 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 68 2e-10 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 68 2e-10 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 68 2e-10 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 67 2e-10 UniRef50_A6NUV3 Putative uncharacterized protein n=2 Tax=Bacteri... 67 2e-10 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 67 3e-10 UniRef50_A5N3B5 Conserved protein n=3 Tax=Clostridiales RepID=A5... 67 3e-10 >UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Tax=Bacteria RepID=FIMB_ECO57 Length = 200 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID Sbjct: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ Sbjct: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN Sbjct: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 Query: 181 AGRFYGIWDRARGRQRHAVL 200 AGRFYGIWDRARGRQRHAVL Sbjct: 181 AGRFYGIWDRARGRQRHAVL 200 >UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ8_PROMH Length = 188 Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 100/182 (54%), Positives = 138/182 (75%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 K+R FLT E+ ++LK A G + R+YC+ L+CF+HGFR SE+C L +SDIDL+++ +Y Sbjct: 2 KQRKFLTRFEVNAILKQAKEGRYPERDYCMFLMCFLHGFRVSELCNLTLSDIDLESRILY 61 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + RLK G STT P++++E +AL NWL R ++ ++SEWVFLS+K P+SRQQ Y ++ Sbjct: 62 VRRLKGGLSTTQPIIDEEYEALCNWLKSRENWRESDSEWVFLSQKTGPISRQQVYGLLRR 121 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 G A +S+ HPHMLRH+CG+ALA++G DTRLIQDYLGHRNI HTV YTASN+ RF + Sbjct: 122 LGKKANVSISPHPHMLRHACGYALADLGRDTRLIQDYLGHRNISHTVIYTASNSKRFINM 181 Query: 188 WD 189 W+ Sbjct: 182 WE 183 >UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family n=8 Tax=Escherichia coli RepID=B1LMF8_ECOSM Length = 209 Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/193 (52%), Positives = 141/193 (73%), Gaps = 3/193 (1%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 + R FLTH EI LL++ ++R+ C+ LL + HG R SE+ L++SD++L + IY Sbjct: 2 QNRKFLTHHEINLLLQSVRQKSCSSRDVCMILLAYFHGLRVSELLSLQLSDLELTTEKIY 61 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSRQQFYHI 124 I R+K GFST HPL +EV A+ NWL+ R S ++ W+F+SR G PLSRQ+FY+I Sbjct: 62 IQRIKNGFSTVHPLQKEEVIAITNWLNERNSLNVKHFNDNPWLFVSRTGKPLSRQRFYNI 121 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 +S +G NAGL++++HPHMLRH+CG++LA+ G+DTRLIQDYLGHRNIRHTV YTASN+ RF Sbjct: 122 VSAAGKNAGLNIKVHPHMLRHACGYSLADNGVDTRLIQDYLGHRNIRHTVIYTASNSMRF 181 Query: 185 YGIWDRARGRQRH 197 +W R +++H Sbjct: 182 EKMWGRGDAKKQH 194 >UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX Length = 187 Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 102/182 (56%), Positives = 129/182 (70%), Gaps = 1/182 (0%) Query: 10 RNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 R +LT E+ L+ AA + RN CL ++ FIHGFRASE+ LR+SDID K + I Sbjct: 3 RKYLTQDEVYRLMDAAQSMSFPERNRCLIMMAFIHGFRASELLDLRLSDIDASGKQLNIR 62 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQFYHIISTS 128 R+K GFSTTHPLL E +K WL R + E +W+FLSRK P+SRQ F+ II + Sbjct: 63 RIKNGFSTTHPLLPDEYNLIKLWLKQRKLIENGVEGDWLFLSRKRRPISRQHFFSIIREA 122 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G AGL+++ HPHMLRH+CGFALA+ G+DTRL+QDYLGHRNI+HTV YTASNA RF G+W Sbjct: 123 GKRAGLAVKAHPHMLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVW 182 Query: 189 DR 190 + Sbjct: 183 KK 184 >UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia proteamaculans 568 RepID=A8GFT2_SERP5 Length = 198 Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 94/187 (50%), Positives = 126/187 (67%), Gaps = 1/187 (0%) Query: 10 RNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 R LT +E+ LL+ A G R+ CL + FIHG R SE+ LR++D+D+++ C+Y++ Sbjct: 8 RKHLTRTEVTRLLQQAAAGRAPERDSCLIWMGFIHGCRVSELNGLRMADLDMESGCVYMN 67 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE-WVFLSRKGNPLSRQQFYHIISTS 128 RLK G ST HPL E L WL R S + E E W+FLS+KG LSRQ+ Y ++ Sbjct: 68 RLKNGLSTIHPLETTEKNLLTRWLEKRRSCRNLEDEEWLFLSQKGYRLSRQRIYRMLQAY 127 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G AGL ++ HPHMLRH+CG+ALA+ G DTR+IQDYLGHRNI+HTV YTA+NAGRF +W Sbjct: 128 GKQAGLDVDAHPHMLRHACGYALADNGADTRVIQDYLGHRNIQHTVLYTAANAGRFKHLW 187 Query: 189 DRARGRQ 195 + + Sbjct: 188 KEEKEEE 194 >UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX Length = 199 Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 92/182 (50%), Positives = 121/182 (66%) Query: 9 KRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 KR +L+ E+ LLKAA ++ R+YC+ + FIHG R SE+ L++ D D + + I Sbjct: 2 KRKYLSEKEVHCLLKAAAENQYSVRDYCMISMAFIHGLRVSELVNLKVDDYDSLSAQLNI 61 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 RLK GF T PLL E + L+ WL R ++ ES W+FLS+ G PLSRQ+F+ ++ Sbjct: 62 KRLKNGFCTIQPLLPDENELLQCWLDERKTWDGHESCWLFLSKNGGPLSRQRFWQLLRKY 121 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G A L++++HPHMLRH+CGF LA G DTRLIQDYLGHRNIRHTV YTASN RF W Sbjct: 122 GDEAHLTIKVHPHMLRHACGFNLAERGNDTRLIQDYLGHRNIRHTVHYTASNPERFRNAW 181 Query: 189 DR 190 + Sbjct: 182 TK 183 >UniRef50_A8GJN9 Integrase family protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GJN9_SERP5 Length = 153 Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 88/148 (59%), Positives = 109/148 (73%) Query: 40 LCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY 99 +CFIHG RASE+ L + +I+L AK IYI RLK G S HPL + E+ L +WL IR S+ Sbjct: 4 MCFIHGLRASELGGLTLDNIELDAKRIYIPRLKNGLSVQHPLHDNEIIMLNHWLEIRKSW 63 Query: 100 PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTR 159 +A+ W+FLSRKG P++RQQ Y +I G NA + + HPHMLRH+CG+ LAN+G+DTR Sbjct: 64 RYADQPWLFLSRKGGPITRQQIYRLIRDYGKNANIQVPTHPHMLRHACGYFLANLGMDTR 123 Query: 160 LIQDYLGHRNIRHTVWYTASNAGRFYGI 187 LIQDYLGHRNI HTV YTASNA RF I Sbjct: 124 LIQDYLGHRNIHHTVLYTASNAMRFQAI 151 >UniRef50_C6NXS4 Fimbriae recombinase n=3 Tax=Gammaproteobacteria RepID=C6NXS4_9GAMM Length = 250 Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 124/198 (62%), Gaps = 11/198 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDID 60 + K + +R LT EI+ LL A R+ CL LL + HG R +E C L++ +D Sbjct: 52 RTKPWSSERKHLTALEIDRLLAATKDNERTGLRDRCLILLMYRHGLRVTEACALQLDQVD 111 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY----------PHAESEWVFLS 110 L++K +++ RLK G ST+HPL N+E++ L++WL+ R + + + VFLS Sbjct: 112 LESKVLHVTRLKGGLSTSHPLRNEEIRLLRSWLNERARWLRRWQKHDLQTPPDRQAVFLS 171 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G LSR + ++ G AGLSL HPHMLRH+CG+ALA+ G DTRLIQDYLGHRNI Sbjct: 172 VRGQALSRNTVWQLLRAYGEAAGLSLPPHPHMLRHACGYALADQGTDTRLIQDYLGHRNI 231 Query: 171 RHTVWYTASNAGRFYGIW 188 +HTV YTA+N RF +W Sbjct: 232 QHTVRYTATNVRRFDRLW 249 >UniRef50_C4XNI1 Site-specific recombinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNI1_DESMR Length = 183 Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 84/181 (46%), Positives = 116/181 (64%), Gaps = 1/181 (0%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 ++R L +E++ L+ A + AR+ C LL F HG R SE C L +S +D +++ ++ Sbjct: 3 QERKHLVSAEVDKLIAATKGTRNEARDRCFLLLMFRHGLRVSEACGLVLSQVDTESRVLH 62 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + RLKKG STT PL E++A+K WL+ R +++ F+S + SR+ + I Sbjct: 63 VARLKKGLSTTQPLRADELRAIKAWLTDRAKM-KPDTDSFFVSERRTAWSRKTAWLAIRH 121 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 G AGL L HPHMLRH+CGFALA+ G DTRLIQDYLGHRNI+HTV YTA+N RF + Sbjct: 122 YGEVAGLPLPAHPHMLRHACGFALADQGADTRLIQDYLGHRNIQHTVRYTATNPARFEKL 181 Query: 188 W 188 W Sbjct: 182 W 182 >UniRef50_A0YRP7 Type 1 fimbriae Regulatory protein fimB n=3 Tax=Cyanobacteria RepID=A0YRP7_9CYAN Length = 193 Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 6/185 (3%) Query: 5 ADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 A ++R +L E+E++ KAA++ G H R+ + LL F HG R +E+ L+ S IDL Sbjct: 12 ASKREREYLRPKEVEAIHKAAHSFGRHGVRDAAIILLMFRHGLRTAELVSLKWSQIDLND 71 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 I I R+K G +THPL E+++L+ I+ YP E+++VF+S + PLS + H Sbjct: 72 GYIEIIRVKHGHDSTHPLRAPELRSLRQ---IKRDYP--ETQYVFVSERKAPLSTRTIRH 126 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 II+ +G AGL ++PH LRH+CG+ LA++G DTR IQDYLGH+NI HTV YT + R Sbjct: 127 IIARAGELAGLKESVYPHQLRHACGYYLASLGHDTRAIQDYLGHKNIHHTVRYTQMSPQR 186 Query: 184 FYGIW 188 F W Sbjct: 187 FESFW 191 >UniRef50_B7KMC0 Integrase family protein n=2 Tax=Cyanothece RepID=B7KMC0_CYAP7 Length = 204 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 6/187 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + R +L E+E+++KAA G H R+ + LL F HG R +E+ L+ S IDL Sbjct: 21 KQPSERDREYLRPYEVEAMIKAARKVGRHGVRDSAIILLMFRHGLRTAELVTLKWSQIDL 80 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 I +HR+K G + HPL + E++AL+ I+ YP E+++VF+S + PLS + Sbjct: 81 TGGYIEVHRVKHGHDSIHPLRSSELRALRQ---IQRDYP--ETQYVFVSERKAPLSTRTI 135 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 H+++ +G A + +HPH LRH+CG+ LA+ G DTR IQDYLGH+NI HTV YT + Sbjct: 136 RHLVARAGLLANIGEAVHPHQLRHACGYYLASQGHDTRAIQDYLGHKNIYHTVRYTQMSP 195 Query: 182 GRFYGIW 188 RF W Sbjct: 196 SRFETFW 202 >UniRef50_C6MXI5 Phage integrase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MXI5_9GAMM Length = 229 Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 114/182 (62%), Gaps = 6/182 (3%) Query: 8 KKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + R +LT +EI+ L+ AA TG H R+ + LL + HG R SE+ L + IDL+ Sbjct: 51 RAREYLTPTEIDKLIVAARRTGRHGKRDATMILLAYRHGLRVSELISLCWTQIDLEQGVF 110 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 ++ R K G ST HPL E++AL+ ++ YP E+++VF++ + P++ F I++ Sbjct: 111 HVIRRKNGLSTHHPLFGAELRALRQ---LKRDYP--ETDYVFMTERKAPITGDTFRKIVA 165 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 +G A L L +HPHMLRHS G+ LAN G DTR IQ YLGH+NI++TV YT +A RF G Sbjct: 166 RAGEVAKLGLSVHPHMLRHSTGYKLANDGRDTRSIQHYLGHKNIQNTVRYTEMSATRFKG 225 Query: 187 IW 188 W Sbjct: 226 FW 227 >UniRef50_C5V7S5 Integrase family protein n=3 Tax=Proteobacteria RepID=C5V7S5_9PROT Length = 217 Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 108/184 (58%), Gaps = 6/184 (3%) Query: 6 DNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 D + R +LT E++ L+ AA G H R+ L +L + HG R SE+ LR +DL+ Sbjct: 37 DYRSREYLTEHEVDQLISAAGKVGRHGHRDATLIMLTYRHGLRVSELVSLRWDQVDLRQG 96 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHI 124 ++I+RLK+G + HP+ E++AL+ ++ YP ++F S + PL+ I Sbjct: 97 LMHINRLKQGNPSVHPIRGPELRALRR---LQRDYP--VLPYLFSSERKAPLTDDAIRKI 151 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 + +G A L +HPHMLRH+CG+ LA G DTR IQ YLGHRNI+HTV YT ++ RF Sbjct: 152 VGRAGVEARLPFTVHPHMLRHACGYKLAQAGQDTRAIQHYLGHRNIQHTVRYTQLSSDRF 211 Query: 185 YGIW 188 W Sbjct: 212 KNFW 215 >UniRef50_A8ZP48 Phage integrase family protein n=6 Tax=Cyanobacteria RepID=A8ZP48_ACAM1 Length = 205 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/178 (44%), Positives = 105/178 (58%), Gaps = 6/178 (3%) Query: 8 KKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + R +LT +E+ L+ AA G H R+ L LL F HG R SE LR + L+ K I Sbjct: 27 RSREYLTLAEVNRLIMAAELRGRHPIRDKALLLLMFRHGLRVSEAISLRWDAVMLELKAI 86 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 I RLK S THPL EV++L++ + YP ++F+ +G L R +I+ Sbjct: 87 GITRLKGSVSGTHPLQADEVESLRDLRA--EGYP---DPYLFVGERGGHLKRHAVTSLIN 141 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 A L ++ HPHMLRHSCG+ LAN G+DTRLIQD+LGHRNI+HTV YT N RF Sbjct: 142 RCAELAQLGIKCHPHMLRHSCGYHLANQGLDTRLIQDWLGHRNIQHTVTYTMLNPKRF 199 >UniRef50_A7BWK3 Type 1 fimbriae Regulatory protein fimB n=1 Tax=Beggiatoa sp. PS RepID=A7BWK3_9GAMM Length = 178 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 6/176 (3%) Query: 10 RNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 R L SE++ LL+A H RNYCL LL + H R SE + S ID + IY+ Sbjct: 2 RKHLLESEVDLLLEATRKSKHYPQRNYCLVLLIYRHALRLSEAINMTWSQIDFANETIYV 61 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 R+K S THPL E+ ALK L T+ S+ +F+S++ PL ++ H+I+ Sbjct: 62 ERIKGSVSGTHPLRPVEIMALK-LLKQDTN----GSKHLFISQRNKPLGKRSVQHLIALF 116 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 G AG+ +HPHMLRH+CG+ LA G DTR+IQ YLGH++IR+TV YT ++ RF Sbjct: 117 GQEAGIEFPVHPHMLRHACGYRLAKEGRDTRVIQAYLGHKDIRNTVIYTELSSKRF 172 >UniRef50_Q2RMN3 Phage integrase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RMN3_RHORT Length = 207 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 6/168 (3%) Query: 5 ADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 AD + R +LT +EI+ L+ AA G H R+ + LL + HG R SE+ LR +DL+ Sbjct: 10 ADRRSREYLTLAEIDRLIAAAQHLGRHDQRDATMILLAYRHGLRVSELVELRREQVDLRQ 69 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 +++ R K G +THPL E++AL L YP E+ +VF+S +G P++ F Sbjct: 70 GLLHVRRRKNGLPSTHPLRGPELRALNKLLR---EYP--ENAYVFVSERGAPMTAATFRK 124 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIR 171 +++ +G A L + IHPHMLRHS GF LAN G DTR IQ YL H+ R Sbjct: 125 LLARAGDAAKLGMPIHPHMLRHSTGFKLANDGQDTRAIQLYLWHKIYR 172 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 7/180 (3%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 +L+ E++ L++A++ P R+Y + L G R SE+C L+I D+D + +Y+H Sbjct: 108 YLSEDEVKRLIEASSENP---RDYAIISLLAYSGLRVSELCNLKIEDVDFNERIVYVHSG 164 Query: 72 KKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 K + + ++AL+N+L R + E++F S+K N +SR Q + I+ Sbjct: 165 KGDKDRIVVVSPRVIEALQNYLYTRED----DMEYLFASQKSNKISRVQVFRIVKKYAEK 220 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 AG+ E+ PH+LRH+ L G+D R IQ +LGH ++ T YT + ++D+ Sbjct: 221 AGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDALLKSVYDKV 280 >UniRef50_D0CZ08 FimB n=1 Tax=Citreicella sp. SE45 RepID=D0CZ08_9RHOB Length = 170 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 ++R++L +I+ LL AA H R++ L L+ F HG R SE R D+DL I+ Sbjct: 20 RRRDYLGQPDIDRLLAAAKKSRHGVRDHLLILMMFRHGLRVSEEIAFRRRDVDLAQSRIW 79 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 I RLK G S P+ E++A+K WL+ R W+F+S + PL+RQ +I++T Sbjct: 80 ITRLKNGLSVEQPVAGDELRAIKRWLARRDD----ALPWLFVSERKLPLTRQAVNYIVAT 135 Query: 128 SGGNAGLSLEIHPHMLRHS 146 +G AGL +HPHMLR Sbjct: 136 AGTRAGLE-RVHPHMLRQP 153 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 5/183 (2%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 FL + EIE+LL + + RN + L + G R SE+ L+I D+DL + + + + Sbjct: 109 FLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLTERSLRV--I 166 Query: 72 KKGFSTTHPLLNKE-VQALKNWLSI-RTSYPH-AESEWVFLSRKGNPLSRQQFYHIISTS 128 KG + V L ++L++ R +P+ +++E VFL+++G PL+ + HI+ Sbjct: 167 GKGNKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRGIQHILEHQ 226 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G AGL +++HPHMLRHS L + G R++Q LGH ++ T YT + + ++ Sbjct: 227 GKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVSMQKIKEVY 286 Query: 189 DRA 191 D A Sbjct: 287 DDA 289 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 13 LTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L EIES LK + P RN + + G R SE+ L I ++DL+ K Y+ Sbjct: 109 LDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDLEEK--YVRCF 166 Query: 72 KKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 KG PL + V++LK +LS+R + + E +FL++KG ++RQ + II Sbjct: 167 GKGEKERIVPLGDYAVESLKRYLSVRHLFNPKDKEALFLNKKGERITRQGVWFIIKAYSK 226 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 GL ++ PH RHS L + G D R++Q+ LGH +I T YT + + + ++ R Sbjct: 227 ILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVSSKLHEVYQR 286 Query: 191 A 191 A Sbjct: 287 A 287 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 9/184 (4%) Query: 11 NFLTHSEIESLLKAANTG---PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 +FL+ +E+++ LKA P RN + + + G R SE+ RL ++ +D + + Sbjct: 110 DFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFDNELLR 169 Query: 68 IHRLKKGFST-THPLLNKEVQALKNWLS-IRT--SYPHAESEWVFLSRKGNPLSRQQFYH 123 + + KG T P+ ++ L+ +L+ +R + + S +VFLS+ G PL+R+ ++ Sbjct: 170 V--VGKGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNPRSPYVFLSKSGRPLNREWIWN 227 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 ++ + AG+ IHPH LRHS L G D R+IQ+ LGH +I T YT ++ R Sbjct: 228 VVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADISTTEIYTHIDSNR 287 Query: 184 FYGI 187 I Sbjct: 288 LAAI 291 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 13 LTHSEIESLLKAANTGPHAA--------RNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 L E++SL+ A + R+ + L + G R SE+ LRI+DID + Sbjct: 127 LNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSLRINDIDPDER 186 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQAL-KNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 I I KG L ++ + L ++L R ESE++FL+R G+PL+ + Sbjct: 187 TIRIR--GKGDKDRIVLFDENTRDLLMDYLKRRIH----ESEYLFLNRFGDPLTPRYVQM 240 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 +I AG+ ++ PH+LRHS L G+D R IQ LGH N+ T YT+ + Sbjct: 241 MIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTSVDMQT 300 Query: 184 FYGIWDRAR 192 ++DRAR Sbjct: 301 LKNVYDRAR 309 >UniRef50_B6ZR00 Site-specific recombinase, phage integrase family n=3 Tax=Escherichia coli O157:H7 RepID=B6ZR00_ECO57 Length = 96 Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%) Query: 39 LLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS 98 ++ FIHGFRASE+ LR+SDID K + I R+K GFSTTHPLL E +K WL R Sbjct: 1 MMAFIHGFRASELLDLRLSDIDASGKQLNIRRIKNGFSTTHPLLPDEYNLIKLWLKQRKL 60 Query: 99 YPH-AESEWVFLSRKGNPLSRQQFY 122 + E +W+FLSRK +P+SRQ F+ Sbjct: 61 IENGVEGDWLFLSRKRSPISRQHFF 85 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 6/189 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D K +FL +E++++ A +T ARN + L + G RASE L++ DIDL Sbjct: 108 KLDKKLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDIDLD 167 Query: 63 AKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQ 119 + + + KG P+ + V+AL +L RT+ PHA+S+ +F++ +G L+ + Sbjct: 168 LSTLLV--MGKGKKERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTDR 225 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 I++ +A L+ ++ PH++RH+ + N G D R +Q+ LGH +++ T YT Sbjct: 226 GLRKILAKVIEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTHV 285 Query: 180 NAGRFYGIW 188 R ++ Sbjct: 286 TRDRLRDVY 294 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 5/174 (2%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 L E++ LL + R+ + L + G R SE+ RL++SDI+ +A I + + K Sbjct: 112 LEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFIRV-KGK 170 Query: 73 KGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLSRQQFYHIISTSGG 130 P+ + + +KN+L +R + SE+VFL+ +G P++RQ+F+ I G Sbjct: 171 GDKERVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQRFWQNIKAIGR 230 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 AG++ + PHM+RHS L G D R +Q LGH +I T YT + R Sbjct: 231 IAGVN--VTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVSMDRL 282 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 9/181 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D + +FL E++ L ++ P RN + L + G R SE+C L+ SD+DL Sbjct: 105 KQDKRIPSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDLS 164 Query: 63 AKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNPL 116 + +H KG + P + +AL +L ++ +VFL+++G PL Sbjct: 165 MDTVLVH--GKGSKQRYVPFGSYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPL 222 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + I++ A +L IHPHMLRH+ L N G D R +Q+ LGH N+ T Y Sbjct: 223 TDRGVRFILTELMKKASGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQVY 282 Query: 177 T 177 T Sbjct: 283 T 283 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 12 FLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 LT E+ LL+A A P R+ + L + G RASE+C L + D+DL + + + R Sbjct: 115 ILTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDLDLSSGTVRV-R 173 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K PL+ + AL+ +L +R ++ +F +G P R+ + +I G Sbjct: 174 GKGDKVRVLPLVGETRSALERYLKVRGTH----QGPIFQGDRGGPFRREMLWKMIQRRGR 229 Query: 131 NAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 A ++ +HPH+LRHSC L G+D R +Q LGH ++R T YT + ++D Sbjct: 230 QACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTHFDL-ELRDVYD 288 Query: 190 RARGR 194 R+ R Sbjct: 289 RSHPR 293 >UniRef50_B2A5E4 Integrase family protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5E4_NATTJ Length = 194 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 7/169 (4%) Query: 12 FLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 F+T E++ L + + H R+ + + + G RASE+ +++SD + K +Y+ Sbjct: 7 FMTQKELDKLFRTIEKSKDKHWLRDITMFRIAYRCGLRASEVGLIQVSDFNPKMNELYVR 66 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 R K + T L NK + LK ++ SY E+E +F S+K +P+SRQ I+ Sbjct: 67 RNKNSLNNTIRLDNKTARYLKKYIK---SYQLKENEIMFKSQKRSPISRQNLDRIMKKYC 123 Query: 130 GNAGLS--LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 A + H H+++HS LA G+D + +Q YLGHRNI T+ Y Sbjct: 124 EKAKIKDVTNWHFHVMKHSIAVHLAETGLDVKELQHYLGHRNIASTLVY 172 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 3/183 (1%) Query: 11 NFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FLT ++ +L + + P A RN + + G R SE+C L ++++DL + + + Sbjct: 128 EFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDLNERILTVT 187 Query: 70 RLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 K P + L +L R Y E +VF+S++G P++ + I++ + Sbjct: 188 G-KGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRAVQLILAQA 246 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G +AGL+ +HPH+LRHS L + G+D R +Q+ LGH ++ T YT R Sbjct: 247 GQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVTVDRLKQSV 306 Query: 189 DRA 191 D A Sbjct: 307 DAA 309 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 3/178 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDID 60 + + + L+ EI L++A G R+ + + + G R SE+ RL+++DID Sbjct: 129 RPRVGRRLPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADID 188 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQ 119 + K I + K G PL + A+ +L +R ++P A ++ +FLS +G PL+RQ Sbjct: 189 -RRKGIVMALGKGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQ 247 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + ++ G++ PH LRHS L G D R +Q LGH N+ T YT Sbjct: 248 AVWKLLGGYARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYT 305 >UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMU3_CLOPH Length = 291 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 12 FLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 +LT ++ SLL A ++ R+ + L + G + SEI L+ DI+LK C+ + Sbjct: 110 YLTKEQVLSLLSAPDSNTKRGLRDKAMLELMYATGMKVSEIGGLKKEDINLKFGCVTVRE 169 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 LKK + P +L+ +L+ ES ++FL R+G P++RQ + I+ G Sbjct: 170 LKK--NRVVPFGQAARASLEAYLASEDDV-RKESPYLFLGRQGEPMTRQGVWKIMKYYGK 226 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 GL ++ P +R+S + G D +++ +GH NI T YT G +G + + Sbjct: 227 QIGLEEDLTPQAIRNSFAIHMIENGADLNSMKELMGHANITATQHYTKQRIGETFGTYHK 286 Query: 191 ARGR 194 R Sbjct: 287 THPR 290 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 12/195 (6%) Query: 13 LTHSEIESLLKAAN-----TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 LT E+ +LL++ GP RN L L + G R SE L + D+D +A+ + Sbjct: 123 LTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQARTVL 182 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLS------IRTSYPHAESEWVFLSRKGNPLSRQQF 121 + K G P+ VQAL +L R + +FL+ +G LSRQ Sbjct: 183 LQG-KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSA 241 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + ++ + +AG++ + PHMLRHS L G D R++Q+ +GH ++ T YT Sbjct: 242 WQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTV 301 Query: 182 GRFYGIWDRARGRQR 196 +W A R + Sbjct: 302 QALREVWAGAHPRAK 316 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 6/188 (3%) Query: 12 FLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 FLT E + L+ AAN G AR+ L L + G R SE+ L I DIDL + + Sbjct: 112 FLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDLNLGVVRV-- 169 Query: 71 LKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 + KG P+ + ++ALK +LS R Y + +FL+R G L+ +++ Sbjct: 170 MGKGSKERLVPITDLAIEALKEYLSTRGVYNSGDP--LFLNRLGGRLTGDGLAYLVKNIT 227 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 A L+ ++ H LRHS + N G D R +Q+ LGH+++ T YT + R I+ Sbjct: 228 IKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLDRLKKIYG 287 Query: 190 RARGRQRH 197 + R + Sbjct: 288 QTHPRSKE 295 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 84/185 (45%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L + LL A R+ + L + G R SE+ L + D+D A +++ + Sbjct: 113 LLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDFGAGSVFVRKG 172 Query: 72 KKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 K G + P+ K ++A+ WL R A +FLSR+G ++ + + Sbjct: 173 KGGKARYVPVGAKALEAIGAWLEARRVLTGAGQPALFLSRQGRRIAPRTVEMRLERWRAK 232 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 GLS +HPHMLRHS + D R +Q+ LGH + T YT + R ++D++ Sbjct: 233 LGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDFQRLAAVYDQS 292 Query: 192 RGRQR 196 R R Sbjct: 293 HPRAR 297 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 6/170 (3%) Query: 11 NFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+ E+E L++A + P R+ + + G R SE+ + +DL + + Sbjct: 113 KILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDLATGALRV- 171 Query: 70 RLKKGFSTTHPLLNKEVQ-ALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + KG L++ + L ++L+ +R ++ E +FL+R G PL+RQ + +I Sbjct: 172 -MGKGAKERIAFLDERTRHLLSDYLTTVRPAFAREHPE-LFLARDGAPLTRQALWTLIKK 229 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 G AG++ + PH+LRHS L G+D R IQ LGH +IR T YT Sbjct: 230 HGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYT 279 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 5/186 (2%) Query: 13 LTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 ++ E++ L A + T P R+ + + + G R SE+ L+ + ++L+ + + I Sbjct: 116 MSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV-IAYG 174 Query: 72 KKGFSTTHPLLNKEVQALKNWLS-IRTSYPH--AESEWVFLSRKGNPLSRQQFYHIISTS 128 K PL +Q LK +L+ +R + + + +FL+ +G ++RQ+F+ II Sbjct: 175 KGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQIIRAY 234 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G AGL + PH+LRHS + + G D R +Q+ LGH +I T YT R ++ Sbjct: 235 GVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRLKKVF 294 Query: 189 DRARGR 194 D+ R Sbjct: 295 DKTHPR 300 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 8/198 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA + LT EI LL A G A R+ L L + G R SE+ L + +DL+ Sbjct: 119 KASRRIPGTLTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDLE 178 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH----AESEWVFLSRKGNPLSR 118 + + K P+ K ++AL +L+ PH +FL++ G PLSR Sbjct: 179 HGFLRVFG-KGAKERVVPIGGKAIEALATYLT--AGRPHFVRSRTGSQLFLNKNGGPLSR 235 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ AGL+ + PH LRHS L + G D R IQ+ LGH +I T YT+ Sbjct: 236 VMLWMLVKKYAKRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTS 295 Query: 179 SNAGRFYGIWDRARGRQR 196 + R D+ R R Sbjct: 296 VESQRLLEQHDKFHPRNR 313 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 87/191 (45%), Gaps = 10/191 (5%) Query: 12 FLTHSEIESLLKAANTG-----PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 L + L AAN+G P A R+ + + + G R SE+C L I D+D + + Sbjct: 111 VLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDIDDVDTSRRLL 170 Query: 67 YIHRLKKGFST-THPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNPLSRQQFYH 123 + L KG T P QAL+ WL S R + AES + L +G L +Q Sbjct: 171 RV--LGKGDKQRTVPFGEPAEQALRAWLTSGRPALATAESGPALLLGARGRRLDPRQART 228 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 ++ + G + +I PH LRHS L G D R++Q+ LGH + T YT R Sbjct: 229 VVHETVGAVAGAPDIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLATTQLYTHVTVAR 288 Query: 184 FYGIWDRARGR 194 + D+A R Sbjct: 289 LRAVHDQAHPR 299 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 6/180 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + L+ +E+E+ L A + R+ L + + G RASE+C LR+ D+ L Sbjct: 129 QKAWQRMPGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCRASEVCTLRVRDLTL 188 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS----IRTSYPHAESEWVFLSRKGNPLS 117 K + H K P+ + ++A++ +L I + + +FLSR G L Sbjct: 189 DEKTLRCHG-KGDKQRMVPIGGRAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKALD 247 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R Q + ++ AG+S EI PH LRHS L G D R +Q+ LGH +I+ T YT Sbjct: 248 RIQLWRLVKRYAKRAGISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYT 307 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 KA + + +I LL + + P R+ + L + G R SE+ L + D+DL Sbjct: 109 KASKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLAG 168 Query: 64 KCIYIHRLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + L KG P+ +K ++AL WL++R + ++ VFL+++G LS + Sbjct: 169 REVRL--LGKGNKERIVPIGSKALEALNRWLAVRNQFKPQDNA-VFLNKRGGRLSHRSIQ 225 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G GL +HPH LRHS + D R +Q+ LGH N+ T YT + Sbjct: 226 LVMQKWGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQ 285 Query: 183 RFYGIWDRARGRQR 196 I+D A R + Sbjct: 286 HLAKIYDAAHPRAK 299 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 5/193 (2%) Query: 5 ADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 + K LT E LL R+ + L + G R SE+ ++++D+++ Sbjct: 113 VEKKTPEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAM 172 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQF 121 + K P + +ALK +L S ESE++F++ G +SRQ F Sbjct: 173 GYVLCRDSDK--ERVIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGF 230 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II AG++ +I PH LRHS G L G D R +Q+ +GH +I T Y N Sbjct: 231 WKIIKFYSAQAGITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNV 290 Query: 182 GRFYGIWDRARGR 194 R I+ +A R Sbjct: 291 RRVREIYAKAHPR 303 >UniRef50_C8SXU7 Type 1 fimbriae regulatory protein FimE n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8SXU7_KLEPR Length = 154 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 53/84 (63%) Query: 9 KRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 +R FLT E++++++AA GP R+YCL LL F HG R SE+ L D+DL + + Sbjct: 3 RRRFLTAKEVQAMMQAARQGPTGERDYCLILLAFRHGMRISELLDLHYHDLDLHEGRVNV 62 Query: 69 HRLKKGFSTTHPLLNKEVQALKNW 92 RLK GFST HPL E +A++ W Sbjct: 63 RRLKNGFSTIHPLRFDECEAIERW 86 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 3/163 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ L L + G R +E+ L + DID + + KG T T P+ + + ALK+ Sbjct: 138 RDRALLELIYSSGLRLAEVTSLNLGDIDWGDAMVTV--TGKGSKTRTLPVGSVAIAALKD 195 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WLS R Y A +F++++G +S + + G+ +HPHMLRHS + Sbjct: 196 WLSQREQYAPASEPALFITQRGKRISHRAVQLRLQQLSVQQGMDNPVHPHMLRHSFASHM 255 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 D RL+Q+ LGH NI T YT + ++D+A R Sbjct: 256 LESSGDLRLVQELLGHANISTTQIYTHLDFQHLAKVYDKAHPR 298 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 6/169 (3%) Query: 11 NFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + L+ EI+ +L N AR+ + + G R SE+C+L+I D+D ++ Sbjct: 109 DVLSLEEIDRILAIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD----DTFVR 164 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 L KG P+ + + A+ +LS R ++ +E++F+++K PL+R + ++ Sbjct: 165 VLGKGGKERIVPIGQQAIAAIDGYLSFREGGENSRNEFLFITKKSKPLTRALVWKLVKFY 224 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 A + I PH RH+ L + G D R+IQD LGH +I T YT Sbjct: 225 ARQASIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYT 273 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 7/179 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + K F E+ ++++ N G P RN + L + G R SE+ L+I +DL+ Sbjct: 101 RGKKKLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYATGMRLSELTDLKIKQLDLE 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQA-LKNWL-SIRTSYPHAESEW--VFLSRKGNPLSR 118 I +H KG + ++E + L+ +L + R S E + VFL++ G P+S Sbjct: 161 NGMILVH--GKGNKDRYVFFDQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISS 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + AGL+ HPH LRHS A+ N G D R +Q+ LGH ++ T YT Sbjct: 219 RGIAKAVQQIFQKAGLTAGAHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYT 277 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 11 NFLTHSEIESLLKAANTGPHA---ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 F +E+E LL+AA+ AR+ + + + G R +E+C + +S D + Sbjct: 107 TFAVPTEVEQLLEAASRQDDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSFD--EVLSF 164 Query: 68 IHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 +H + KG + P+ VQAL+ ++ +R +FLS+KGN ++ Q +++ Sbjct: 165 VHVMGKGKKERYVPIGQYAVQALQRYIELRKGVGLPTETALFLSQKGNRMTTDQIRYVMK 224 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 ++G+ + PH LRHS L G D R +Q+ LGH ++ T YT + R Sbjct: 225 RLRKDSGVHKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHVSTERLRS 284 Query: 187 IW 188 I+ Sbjct: 285 IY 286 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 11/169 (6%) Query: 16 SEIESLL-KAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLK---AKCIYIHR 70 S++ +LL + +G A R+ + L + G R +E+ L + D+DLK +C R Sbjct: 119 SQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDVDLKEGFVRCFGKGR 178 Query: 71 LKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE-WVFLSRKGNPLSRQQFYHIISTS 128 ++ P+ + Q+++ +L+ IR + AE+E +FL+R+G+ L+RQ + I+ Sbjct: 179 KERMI----PIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLTRQGLWQILKGY 234 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AGL + PH LRHS + + G D R +Q+ LGH NI T YT Sbjct: 235 AREAGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYT 283 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 4/188 (2%) Query: 11 NFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+ E LL+ + P A R+ L L + G R +E L + +DL + + Sbjct: 112 GVLSPDEAARLLEGSPEDDPLALRDRALYELIYSSGLRLAEAVGLDLGRLDLTEGLVEV- 170 Query: 70 RLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 + KG T P+ K +AL+ WL++R + A+ VF+S++G LS + ++ Sbjct: 171 -VGKGAKTRRVPVGGKAREALQAWLAVRPALAGADEPAVFVSQRGGRLSARSVQARLARL 229 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 +G+ +HPHMLRHS L D R +Q+ LGH +I T YT + ++ Sbjct: 230 ATLSGVGRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVY 289 Query: 189 DRARGRQR 196 D+A R R Sbjct: 290 DQAHPRAR 297 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%) Query: 7 NKKRNFLTHSEIESLL-KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 K L+ E++ LL + TGP A R+ L L + G RASE +++ ++D+ Sbjct: 123 KKLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDVDDGI 182 Query: 66 IYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLSRQQF 121 + + K P+ +K + AL+++L+ P E + VF++++G+ L+RQ Sbjct: 183 LRANG-KGNKERLVPIGSKALDALRHYLT--RGRPQMVGLREEKRVFVNQRGHGLTRQGL 239 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 Y I+ AGL ++ PH LRH+ L G D R +Q+ LGH +I T YT +A Sbjct: 240 YKIVQRHARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHLSA 299 Query: 182 GRFYGIW 188 R ++ Sbjct: 300 ERLRDVY 306 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 6/178 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA + FL+ ++ +LL+ + H RN + + + G R SE+ L+ +DL Sbjct: 102 KAGTRLPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLV 161 Query: 63 AKCIYIHRLKKGF-STTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQ 119 A C ++ KG P + Q WL + S ++F++R GNP++RQ Sbjct: 162 A-C-FVRLFGKGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 F+ ++ AG+S+++ PH LRHS L G D R +Q LGH +I T YT Sbjct: 220 GFWKLLKKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYT 277 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 6/184 (3%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 +L+ E + L++AA++ R Y + + G R E+C L+ISD+DL+ I + R Sbjct: 104 YLSEDEAKRLIEAASSD---TRMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINV-RS 159 Query: 72 KKGFSTTHPLLNKE-VQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 KG ++ +E V+AL ++L +R S +++++F+S + +I G Sbjct: 160 GKGDKDRIVIMAEECVKALGSYLDLRLSM-DTDNDYLFVSNRRVRFDTSTIERMIRDLGK 218 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 AG+ ++ PH+LRH+ ++ G D R IQ LGH ++ T YT N ++ + Sbjct: 219 KAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMYTQ 278 Query: 191 ARGR 194 R R Sbjct: 279 HRPR 282 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 8/176 (4%) Query: 17 EIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGF 75 +++ LL+ + P R+ L L + G R SE+ R+ ++DL A+ I + K Sbjct: 134 QVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDLDARIIRVTG-KGNK 192 Query: 76 STTHPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 P+ K A++ +L P VFLS +G L+ + + I+ N Sbjct: 193 MRLVPVGQKACDAIRAYLE--KERPEMVGKKTGSEVFLSSRGTKLTTVRIWQIVKACAKN 250 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AGL + ++PH+LRHS L + G D R+IQ+ LGH +I T YT + R + Sbjct: 251 AGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHVDQQRLKAV 306 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 4/158 (2%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R L L + G R SE L + D+DL+A + +H K G PL + A+ ++ Sbjct: 250 RATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHG-KGGRDRIVPLGRYAIAAVADY 308 Query: 93 LSI--RTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 L + T VFLSR+GN LSRQ + ++ T+ AG+ + PH+LRHS Sbjct: 309 LRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAGVE-GVSPHVLRHSFATH 367 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 L + G D R++Q+ LGH ++ T YT R ++ Sbjct: 368 LLDGGADVRVVQELLGHASVSTTQIYTLVTVDRLREVY 405 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 1/184 (0%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 L ++ LL+ + P A R+ + L + G R SE+ + DI I + R K Sbjct: 129 LDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAANGEILV-RGK 187 Query: 73 KGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNA 132 P+ +K + ALK WL IR + + + VFLS K N +S +Q + G Sbjct: 188 GNKERLIPVGSKALNALKKWLIIRPQFANPDEVAVFLSSKKNRISVRQVRLRMQEWGIKQ 247 Query: 133 GLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRAR 192 G+S ++HPH LRHS + D R +Q+ LGH ++ T YT + ++D Sbjct: 248 GISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAKVYDNTH 307 Query: 193 GRQR 196 R + Sbjct: 308 PRAK 311 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 15/181 (8%) Query: 8 KKRN-----FLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KK+N F +E+++L + A P RN L + + G R SE L +SDID Sbjct: 105 KKKNLRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDF 164 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNP 115 ++ + IH KG + PL + AL+ + + T Y H E + VF++ G P Sbjct: 165 DSEVMLIH--GKGNKERYAPLGSFAQDALQEYFREGRQVLMTKY-HEEHDIVFVNHHGKP 221 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 ++ ++++ + L +IHPHMLRH+ L N G D R +Q+ LGH N+ T Sbjct: 222 ITPTGIEYVLNQMIKKSSLDSDIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQI 281 Query: 176 Y 176 Y Sbjct: 282 Y 282 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 8/191 (4%) Query: 13 LTHSEIESLLKAANT--GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 L+ E+E+LL AA++ ++ R+ L + G R SE L + DID + + + Sbjct: 128 LSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLDDIDFETEPALVRL 187 Query: 71 LKKGFSTTHPLLNKEV-QALKNWLSIRTSYPHAESEW----VFLSRKGNPLSRQQFYHII 125 KG +L + QAL+ +L +R AE VFL+ G P+SRQ + II Sbjct: 188 FGKGRKERISMLGHQACQALQAYL-VRVRPTLAEKGQSRGRVFLNTYGKPMSRQTAWAII 246 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFY 185 + A + +HPH LRH L G D R++Q+ LGH ++ T YT + Sbjct: 247 QAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTTEIYTKVSKQMLL 306 Query: 186 GIWDRARGRQR 196 ++ A R R Sbjct: 307 EVYASAHPRAR 317 >UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9N6_9BACT Length = 308 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 5/171 (2%) Query: 11 NFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+ EI+ LL++ + R+ + + G RASEIC L ++ +D+ + +++ Sbjct: 112 QVLSDGEIDRLLESCSGESWMDVRDRTILQILADCGLRASEICSLTLASVDMDTRFLHV- 170 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTS-YPHAES-EWVFLSRKGNPLSRQQFYHIIST 127 R K + P L WL++R +P + ++F SR G+ L+R + +I Sbjct: 171 RGKGNKDRSVPFGASVADWLTKWLAVRADGHPTGGARSFLFASRTGDRLTRIDLWRLIRR 230 Query: 128 SGGNAGLS-LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 G AG++ +HPH+LRHS L G+D R +Q++LGH +I T YT Sbjct: 231 RGERAGVAKARLHPHVLRHSVATRLLRRGMDLRTLQEFLGHSSIGTTEKYT 281 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 27/194 (13%) Query: 11 NFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + L+ SE+E ++ AA +T + R+ L + G R SE L+ DIDL + Sbjct: 123 DVLSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTESVV 182 Query: 67 -----------------YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP------HAE 103 + L+ + P+L Q R P A Sbjct: 183 RLSGKGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSPLNSSSKSAN 242 Query: 104 SEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQD 163 + +FL+++G LSRQ + IS +G A + E+HPH LRHS L + G D R +Q+ Sbjct: 243 THVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRTVQE 302 Query: 164 YLGHRNIRHTVWYT 177 LGH ++ T YT Sbjct: 303 LLGHASVTTTQIYT 316 >UniRef50_C3Q7K5 Tyrosine type site-specific recombinase n=7 Tax=Bacteroidales RepID=C3Q7K5_9BACE Length = 376 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 10/168 (5%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 + L+ EI+S+L A TGP R +C+ L + G R SE+ L+ DI++ I + R Sbjct: 192 DVLSKEEIKSILDA--TGPDI-RLFCMFSLLYSAGLRISELLDLKPHDINVSRSLIRV-R 247 Query: 71 LKKGFSTTHPLLNKE-VQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 KG + LL+K V+ L + + + EW+F KG P + + + Sbjct: 248 QGKGRKDRYTLLSKPLVRKLTEYTKL-----YKPQEWLFERYKGEPFTESIVSKKLKEAA 302 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG++ ++PH+LRHS L G D +++++ LGH ++ T Y Sbjct: 303 KEAGITKRVYPHLLRHSFATHLIEQGTDLKIVKELLGHNQLKTTEMYV 350 >UniRef50_B2JY18 Integrase family protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JY18_BURP8 Length = 413 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 3/157 (1%) Query: 26 NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKE 85 +T P R + +L I+G RASE+ +LR+ DID + + + R K+ +PLL Sbjct: 242 STDPKDIRARAVLMLLSIYGMRASEVAKLRLDDIDWERDQLRVRRAKRRELQVYPLLPSV 301 Query: 86 VQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIH-PHML 143 +A+ ++L +R H E + +S PLS + Y ++S A + H PH L Sbjct: 302 GKAIVDYLQHVRPRSAHREVFLILMS-PFRPLSAKGIYGVVSPRLKAADVHCAHHGPHAL 360 Query: 144 RHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 RH+C L G+ + + D+LGHR+ R T YT + Sbjct: 361 RHACAARLVAQGLSLKEVGDHLGHRSTRATRIYTKVD 397 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 11/183 (6%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 LT E+ +L P R+ + LL + G R SE+C L+ SD+D + I + K Sbjct: 100 LTREEVRKILSV--IPPTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLIIVRGGK 157 Query: 73 KGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLS---RKGNPLSRQQFYHIISTSG 129 P+ ++ +K +L R +SE++ + + + LS + ++++ G Sbjct: 158 GAKDRVVPIPAFLLEGIKAYLETRDD----DSEYLIVEDRRERKDKLSPKTVWYLLKKYG 213 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 AG+ + PHMLRHS + G+D R IQ+ LGH N+ T YT + Sbjct: 214 DRAGIR--VTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEHLRKAQE 271 Query: 190 RAR 192 +AR Sbjct: 272 KAR 274 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 14/186 (7%) Query: 4 KADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D LT +++ LL+ + P R+ + L + G R SE+ L ++D+DL Sbjct: 102 KVDRDLPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVDL 161 Query: 62 K---AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY----PHAESEWVFLSRKGN 114 + +CI K G P+ AL+ + I + + +E +FL+ +G Sbjct: 162 ERNEVRCIG----KNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGK 217 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 L+RQ F+ I+ GLS ++ PH+LRHS + N G D R +Q+ LGH +I T Sbjct: 218 RLTRQGFWLILKQYAEELGLS-DLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQ 276 Query: 175 WYTASN 180 YT N Sbjct: 277 IYTHLN 282 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 10/171 (5%) Query: 13 LTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 ++ E+E L+ + +T P RN + + G R SE+ +++ +I+L+A I I Sbjct: 44 ISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINLEASFIRIFG- 102 Query: 72 KKGFSTTHPLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 K P+ + ++ ++NW+ I + P S ++F++R G P++RQ F+ ++ Sbjct: 103 KGSKERIVPIGSFAIEKVRNWIMHGRPIILKNIP---SHYLFVARAGKPMTRQGFWKLLK 159 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +G+S +I PH RHS L G D R +Q LGH +I T YT Sbjct: 160 KYSRASGISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYT 210 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 9/180 (5%) Query: 4 KADNKKRNFLTHSEIESLL-KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + K + L+ E+ LL + P R+ + L + G R SE+ L + I++ Sbjct: 102 KIEKKAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINMT 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH----AESEWVFLSRKGNPLSR 118 +I G T P +AL ++L + S P ES+W+F++ G +SR Sbjct: 162 IG--FITCSDSGRERTIPFGRVAKKALDDYL--KNSRPELTKKKESDWLFVNCSGGQMSR 217 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ II G AG+ +I PH LRHS L + G D + +Q LGH ++ T Y A Sbjct: 218 QGFWKIIKYYGEKAGIQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYAA 277 >UniRef50_Q5LEL4 Putative tyrosine recombinase n=2 Tax=Bacteroides fragilis RepID=Q5LEL4_BACFN Length = 294 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 10/168 (5%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 + L+ EI+S+L A TGP R +C+ L + G R SE+ L+ DI++ I + R Sbjct: 110 DVLSKEEIKSILDA--TGPDI-RLFCMFSLLYSAGLRISELLDLKPHDINVSRSLIRV-R 165 Query: 71 LKKGFSTTHPLLNKE-VQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 KG + LL+K V+ L + + + EW+F KG P + + + Sbjct: 166 QGKGRKDRYTLLSKPLVRKLTEYTKL-----YKPQEWLFERYKGEPFTESIVSKKLKEAA 220 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG++ ++PH+LRHS L G D +++++ LGH ++ T Y Sbjct: 221 KEAGITKRVYPHLLRHSFATHLIEQGTDLKIVKELLGHNQLKTTEMYV 268 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 6/188 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K +FL+ E++ L++ + AR+ + L + G R SE+ L DID Sbjct: 108 KLGRKLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAG 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + R K PL N ++A + +L +R + E + L+ +G LS + Sbjct: 168 SSLLRV-RGKGNKERIVPLTNYALEAARQYLEMRED----KQEALLLNYQGTRLSVRSIR 222 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I+ AGLS +HPHMLRHS L + G D R +Q+ LGH + T YT Sbjct: 223 RILDGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKE 282 Query: 183 RFYGIWDR 190 R ++++ Sbjct: 283 RLREVYEQ 290 >UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHC9_ACHLI Length = 306 Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 9/193 (4%) Query: 12 FLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 + I L + +T P RN + L + G RASE+ L I DI L + I IH Sbjct: 111 IIDEEAINYLFDSIDTSKPLGYRNLVILDLLYSCGVRASELINLEIKDIYLSSGQILIH- 169 Query: 71 LKKGFSTTHPLL-NKEVQALKNWLS-IRTSY----PHAESEWVFLSRKGNPLSRQQFYHI 124 KG + +L K ++ ++++LS +R + + +F++ KG PL+ + I Sbjct: 170 -GKGKKDRYIILHEKLIEEIRHYLSFVRVTLLSKGDDTNQQKLFINYKGGPLTVRGLRVI 228 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 ++ ++G + IHPHMLRH+ + N G D R++Q+ LGH +++ T YT + + Sbjct: 229 LNQMIKDSGETYAIHPHMLRHAFATTMLNHGADLRVVQELLGHEHLKSTQIYTHVSKEQL 288 Query: 185 YGIWDRARGRQRH 197 + + R +H Sbjct: 289 KEKYMQTHPRNQH 301 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 15/189 (7%) Query: 13 LTHSEIESLLKAANTGPHAA--------RNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 LT E++SL+ A + R+ + + G R SE+ +L+ DID + Sbjct: 143 LTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKLQKKDIDFDER 202 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQAL-KNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 I + KG L ++ + L N++ + + +SE++F+++ G L+ + Sbjct: 203 TIRVR--GKGEKDRIVLFDENTRDLIDNYIETQ----NQKSEYLFINKNGRKLTPRYVQM 256 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 +I AG+ ++ PH+LRHS L G+D R+IQ LGH ++ T YT + Sbjct: 257 MIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTNVDMDT 316 Query: 184 FYGIWDRAR 192 ++D AR Sbjct: 317 IKSVYDHAR 325 >UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadales RepID=XERC_ERYLH Length = 306 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIH-----GFRASEICRLRISDIDLKAKCIY 67 L+H E+E L + A +R + LL I G RA+E+ L ++ + A + Sbjct: 107 LSHKEVERLFEQAEREAETSRPLPVRLLALIELLYGSGLRATELVSLPVAAVPRDAPFLT 166 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + K G + P+ + +AL++W+ +R S +S ++F SRK + ++R + + ++ Sbjct: 167 VTG-KGGVARMVPVSGRAREALQSWMGLRGS----DSPYLFPSRKAH-ITRVRLFQMLKE 220 Query: 128 SGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 A L+ + + PH+LRH+ L G D R++Q LGH +I T YT +A R Sbjct: 221 LAVRADLNPDKVSPHVLRHAFATHLLEGGADLRVLQTLLGHADISTTQIYTHVDAARLVA 280 Query: 187 I 187 + Sbjct: 281 L 281 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 ++++ E++ +L+A RN + L + G R SE+C L + DI L++ + R Sbjct: 115 EYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLESDPLV--R 172 Query: 71 LKKGFSTTH---PLLNKEVQALKNWLSIRTSYPHAESEW-VFLSRKGNPLSRQQFYHIIS 126 +K G PL V+ + ++L R +P A +F+ +G P++R+ ++ Sbjct: 173 VKSGKGDKDRIVPLTPDAVRIISDYLKHRDRFPDANRHIKLFVGIRGEPITRKSVNKMLQ 232 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +HPH+ RHSC L G +++Q+ LGH NI T Y Sbjct: 233 NHVKKIFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIY 282 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 6/178 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + D + FLT +E+ LL+ ++ P R+ L + G R SE+ +L I ++DL Sbjct: 102 RLDKRLPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDLH 161 Query: 63 AKCIYIHRLKKGFSTTHPLLN-KEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 + I + KG L+ +Q+++ +L++ + + +FL+ G LS + Sbjct: 162 SHQIRV--WGKGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSAR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 F + AG+ +HPHMLRH+ L + G D R++Q+ LGH N+ T YT Sbjct: 220 SFQERLDKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYT 277 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 13 LTHSEIESLLKAANTGPHA-ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L E+E L+++ T A AR+ + + + G R SE+C +D A+ ++ + Sbjct: 113 LARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGF---TLDTIAQGRWVPVV 169 Query: 72 -KKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K+G P+ AL+ W+ + +F++ +G P++RQ + ++ Sbjct: 170 GKRGRERLVPISAPARDALEQWVVRWRPQLAPKHRMLFVNLRGAPITRQGVWLVLKQRAS 229 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 GL + PH+LRHS + G D R++Q+ LGH ++ T YT + G ++ R Sbjct: 230 RVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHVDAVYQR 289 Query: 191 ARGRQR 196 A R R Sbjct: 290 AHPRAR 295 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 4/188 (2%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ E+ S+L+ + RN L L + G R SE+ +++ DI ++ + + Sbjct: 112 LSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYVIVTG- 170 Query: 72 KKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K P+ + + A++N+L R +++++F++ +G LSR F+ ++ Sbjct: 171 KGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRVGFFKVLKKLAS 230 Query: 131 NAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 A L E + PH LRHS L G+D R +Q+ LGH +I T YT + R +++ Sbjct: 231 EANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQSRLKQVYN 290 Query: 190 RARGRQRH 197 + R + Sbjct: 291 KTHPRAKE 298 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 20/185 (10%) Query: 22 LKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THP 80 + A P A R+ + + G R SE+CRL I D+D + + I L KG P Sbjct: 150 VGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIGDLDFARQTVTI--LGKGNKQRVVP 207 Query: 81 LLNKEVQALKNWLSIRTSYPHAE------SEWVFLSRKGNPLSRQQFYHII-----STSG 129 ALK W+ I A E VFL ++G + +Q ++ + SG Sbjct: 208 FGESAAHALKRWIDIGRPAIAANGHHKDADEAVFLGKRGGRIDPRQVRTVVHQATSTVSG 267 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 G+ + PH LRHS + G D R++Q+ LGH ++ T YT ++ R +++ Sbjct: 268 GD------VSPHALRHSAATDVLEGGADLRVVQEMLGHASLATTQIYTHVDSERLKAVFN 321 Query: 190 RARGR 194 +A R Sbjct: 322 QAHPR 326 >UniRef50_B2GC24 Integrase n=3 Tax=Lactobacillus fermentum RepID=B2GC24_LACF3 Length = 292 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 5/145 (3%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQA-LKN 91 RN L L G RA+E+ L+ D+DL+ +Y+ + + LN++ Q L Sbjct: 138 RNRALVALLVATGARANELRDLQTGDLDLELGVVYLGQSSRRLVP----LNEQAQTYLTT 193 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 +L+ R + +VFL+ +G PLSRQ + I++ +G A + + P +R + L Sbjct: 194 YLTARADQSATDEGYVFLNNRGQPLSRQSIWEIVNATGQRANIEGAVTPQRVRDGFAYRL 253 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWY 176 G D L+Q +GH++I T Y Sbjct: 254 LAHGADLSLVQQLMGHQSILTTQVY 278 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 13 LTHSEIESLLKAANTGPHAA----RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 L+ +E+ ++L++ A+ R+ L + + G R SE+ L + D+D K I + Sbjct: 117 LSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTEKLIIV 176 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 R K P+ + + AL+++L +R ++ S +FL+R G + RQ ++++S+ Sbjct: 177 -RGKGSKERVVPVGDPALDALQHYLVRVRPAFNKKGSAALFLNRNGGRMGRQSAFNMVSS 235 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AG++ + PH RHS L G D R++Q+ LGH N+ T YT + Sbjct: 236 VSEKAGVA-GVSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYTKVSPDHLREA 294 Query: 188 WDRARGR 194 W + R Sbjct: 295 WSESHPR 301 >UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UF10_9PROT Length = 315 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 6/180 (3%) Query: 13 LTHSEIESLLKAANT-GPHAARNYCLTLLCFIH--GFRASEICRLRISDIDLKAKCIYIH 69 L+ EI LLK A T P +A L +L ++ G R SE+ L + + I + Sbjct: 123 LSEVEIIQLLKMAKTLEPESASLRALAMLEILYATGLRVSELVSLLVVQFRRNPQTILV- 181 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYP-HAESEWVFLSRKGNPLSRQQFYHIISTS 128 + K G PL A W+ R S P +S+++F R G P+SR Q ++ Sbjct: 182 KGKGGRERLVPLGETARLAAVRWIECRDSNPAFVQSDYMFPVRGGGPMSRHQLARLLKKL 241 Query: 129 GGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 A + + + PH LRHS + N G D R +Q LGH +I T YT+S R G+ Sbjct: 242 AVAADIEVGRVSPHKLRHSFATHMLNRGADLRSLQSLLGHADISTTQIYTSSRPERLAGL 301 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 6/178 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K L+ E+E+LL + +TG R+ + L + G R SE+ L++S+++L Sbjct: 99 KGVRKLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNLS 158 Query: 63 AKCIYIHRLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 A Y+ + KG P+ A +L E S +FLSR G +SRQ Sbjct: 159 AG--YLMTIGKGDKERLVPMGESACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQ 216 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 F++II AG+ I PH LRHS L G D R +Q LGH ++ T YT Sbjct: 217 AFWNIIKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYT 274 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ L + + G R SE+ L + ++L+ + I + L KG PL + QA+++ Sbjct: 162 RDRMLLEVLYATGMRVSELSELSLERLNLEVQLIRV--LGKGNKERIVPLGDSATQAIRD 219 Query: 92 WLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 +LS +R S ++ L+ KG P+S +Q + + ++L+I+PH LRHS Sbjct: 220 YLSHLRPKIDRNNSPYLLLTDKGAPMSPRQIRTRLKSLVEEQAMNLKIYPHKLRHSFATH 279 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 L N G D R +Q+ LGH N+ T YT + + +A R + A Sbjct: 280 LLNKGADLRTVQELLGHANLSSTQIYTHVTKDQLRSQYLKAHPRAKQA 327 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 34/183 (18%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDI------------ 59 LT +EIE++L + RN L + GFR SEIC L+++D+ Sbjct: 117 LTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLHDELGLITTIGK 176 Query: 60 DLKAKCIYIHRLK-----KGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 K + + I + K F + P+L K+ ES ++FL+ G+ Sbjct: 177 GQKQRIVPIGEMSLLYISKYFKESRPILLKD----------------KESPYLFLNDHGH 220 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 +SRQ + ++ AG+ +I PH LRHS L G D R++Q+ LGH +I T Sbjct: 221 RISRQGIFKLVKEIAIKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQ 280 Query: 175 WYT 177 YT Sbjct: 281 IYT 283 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 7/170 (4%) Query: 13 LTHSEIESLLKAANTGPHAAR-NYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ ++E ++KA N R N C+ + + G R SE+ L+IS+I+ K +Y+ Sbjct: 115 LSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINFKE--LYLKVD 172 Query: 72 KKGFSTTH-PLLNKEVQALKNWL-SIRTSYPHAE--SEWVFLSRKGNPLSRQQFYHIIST 127 KG + PL + +K ++ IR+ Y + + +FL+ +G+ +SR + II Sbjct: 173 GKGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSRVIVFIIIKE 232 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG++ +I PH RHS L G D R IQ+ LGH +I T YT Sbjct: 233 LTEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYT 282 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 4/165 (2%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQ 87 P R+ L + + G R SE L + +DL K + + L KG PL + Sbjct: 137 PEGLRDLALLEVLYGSGLRVSEALGLDFAHVDLDQKLVRV--LGKGRKERLVPLTGPAAE 194 Query: 88 ALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHS 146 L ++ R ++ P A + VFL ++G LSR+Q I+ +G I PH LRHS Sbjct: 195 RLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQADRIVKEMAVRSGAPCSISPHTLRHS 254 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 + G D R +Q+ LGH I T YT + + ++D A Sbjct: 255 FASHMLQAGADLRSVQELLGHSRISTTQRYTHLDLAQVMRVYDAA 299 >UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL21_DESVM Length = 371 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 68/151 (45%), Gaps = 2/151 (1%) Query: 45 GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES 104 G R SE L + D D + + + K G PL + AL WL++R Sbjct: 184 GLRVSEALELNVLDADPASGVVRVMG-KGGRERMSPLSDTARDALSAWLAVRHQVDEGRG 242 Query: 105 E-WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQD 163 E +FL +G L+R+Q II T AGL I PH LRHS L G D R +Q+ Sbjct: 243 EPALFLGARGGRLNRRQAARIIETLCLRAGLPQAISPHGLRHSFATHLLEAGADLRSVQE 302 Query: 164 YLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 LGH + T YT R ++DRA R Sbjct: 303 LLGHARLSTTQRYTHLTLSRLVDVYDRAHPR 333 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 5/168 (2%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 +LT EI+S+ ++A G + R+ L L + G R SE +++S IDL+ + ++ Sbjct: 112 QYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDLENE--WLMP 169 Query: 71 LKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 + KG PL +K + L+ W+ H ++ + L+ G P+SR + I+ Sbjct: 170 IGKGNKQRLVPLGSKAKENLRAWIEEGRPLTHPTTDNIILNAHGKPMSRMGAWKIVQLH- 228 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 LS ++ PH RHS G+D R++Q+ LGH +I T YT Sbjct: 229 -TMHLSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYT 275 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 13/177 (7%) Query: 11 NFLTHSEIESLLKAA-NTGPHAA---RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + L+ E+ +++AA N G A R+ L + G R SE ++ DIDL + Sbjct: 127 DVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDLNESVV 186 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA------ESEWVFLSRKGNPLSRQQ 120 + K P+ V+AL+N++ S P E +FL+++G+ LSRQ Sbjct: 187 KLTG-KGSKQRLVPIGGCAVRALRNYM--EKSRPELALKGKRELHTIFLNKRGSALSRQS 243 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I++ +G A L +HPH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 244 AWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQIYT 300 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 2/164 (1%) Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALK 90 AAR++ L L + G R SE L ++D+ L + + K PL + V AL+ Sbjct: 162 AARDHALAELLYGSGLRISEALGLDVTDLRLDESVVRVFG-KGARERMSPLSDTSVTALR 220 Query: 91 NWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 WL R + + +F+ +G L R++ I NAG+ + PH LRHS Sbjct: 221 AWLEQRGTLAPEGEKALFVGARGGRLDRREAMRRIERLCRNAGVE-PVSPHALRHSFATH 279 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 L + G D R +Q+ LGH+ + T YT + R ++D A R Sbjct: 280 LLDAGADLRSVQELLGHQRLTTTQRYTRVSLERLMHLYDEAHPR 323 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 7/194 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K+ K N L +I +L A T P A R+ + L + G R +E+ L + DIDL Sbjct: 109 KSPRKLPNSLDPDQISQVLNATITSDDPMAMRDKAMLELTYSCGLRLAELASLNVFDIDL 168 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + KG T P+ + + ALK+WL R ++ +F++ +G + + Sbjct: 169 TDASLIV--TGKGNKTRQLPIGRQAITALKSWLQQRGQLKCHDANALFINHRGQRMGVRG 226 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G IHPHMLRHS L D R +Q+ LGH NI T YT + Sbjct: 227 IQMRMANMAATHGQ--HIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLD 284 Query: 181 AGRFYGIWDRARGR 194 ++D+A R Sbjct: 285 YQHLAKVYDKAHPR 298 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 5/174 (2%) Query: 9 KRNF---LTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 +RNF LT E+E LL + R+ + + + G + +E+ L I DI+LK Sbjct: 102 RRNFPDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKLS 161 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHI 124 I +K P+ + V+ L+ +L +RT +++F + +G+ ++RQ F+ I Sbjct: 162 YIKCRGIKNK-ERIIPMGSYAVKCLEIYLKVRTKLNVQNIDYLFFNLQGDKMTRQGFWKI 220 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 I +G+ +I+ + LRHS L G D + IQ+ LGH ++ T Y+ Sbjct: 221 IKQYAQESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSG 274 >UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga lettingae TMO RepID=XERC_THELT Length = 286 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 10/167 (5%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 +FL SEI+ LL+ + R+Y + L + G R SE+C LR+ D+ + I Sbjct: 110 DFLLPSEIQKLLEFSMKN---QRDYLMLSLLYFCGLRVSELCNLRVEDLSFSPAFVKITM 166 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSR-KGNPLSRQQFYHIISTSG 129 K PL +K + L+N++ TS + +++F S+ K +P + I+ Sbjct: 167 GKGKKDRIVPLTSKLAEKLENYI---TSCGKSPEDYLFGSQIKIHP---STVFRIVRKYT 220 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 G+ IHPH LRH+ L G++ R++QD LGH N+ T Y Sbjct: 221 MMCGIKKRIHPHTLRHTFATHLLQKGVNIRVVQDLLGHSNLSTTSVY 267 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 12/167 (7%) Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQAL 89 AAR+ + L + G R E+C+ +SD++ I + + KG P AL Sbjct: 146 AARDLAIVELLYATGMRVEELCKADVSDVNFSRHIISV--VGKGDKQRIVPFGAPAEAAL 203 Query: 90 KNWLSIRTSYP-HAESE-WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSC 147 K WL +R ++P A++E +FL +G L+ +Q +I ++ PH LRHS Sbjct: 204 KGWLQVRGNFPASAQAEHALFLGVRGGRLNPRQARRVIHKWA-------DVSPHALRHSA 256 Query: 148 GFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 A+ G D R++Q+ LGH ++ T YT +A R + RA R Sbjct: 257 ATAMVEGGADLRVVQEMLGHSSLATTQIYTHVSADRLREVHKRAHPR 303 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 4/180 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + K LT +++ LL A ++G P AR+ + L + G + SE+ L I DI L+ Sbjct: 102 KPERKPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHLE 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYP-HAESEWVFLSRKGNPLSRQQ 120 + + + G P+ +++ ++ +R A + +FL+ G L+RQ Sbjct: 162 MRFLRCA-VSGGKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQG 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ II G AG+ +I PH LRHS L G D R +Q+ LGH + T Y ++ Sbjct: 221 FWKIIKKYGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMYQSAK 280 >UniRef50_A4J2M3 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2M3_DESRM Length = 293 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 6/152 (3%) Query: 32 ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLLNKEVQALK 90 AR+ L L G R E+ +R+SD+D+ + + L KG P+ + +A+K Sbjct: 134 ARDIALIRLMMSCGLRVGEVVSIRLSDLDIGERHGTVAVLGKGKKYRKVPVPPEARKAIK 193 Query: 91 NWLSIRTS-YPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 WL+ RT YP +++W+F +R ++ + +I G AGL L HPH+LRH+ Sbjct: 194 EWLAERTQRYP--DNDWLFPNRNVGNITARNVEQVIKNIGKFAGLDL--HPHVLRHTAAT 249 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + G D + LGH N+ T YT ++ Sbjct: 250 NMIRTGADIVTVAQILGHANLNTTAIYTKPDS 281 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 12/175 (6%) Query: 13 LTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 L+ E+ +L A+ TG A R+ L + G R SE C L +SD+D++++ + + Sbjct: 112 LSEDEVARIL-ASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDMESQLVRLFG 170 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--------VFLSRKGNPLSRQQFY 122 K P + AL+ WL +W VFL +G LSRQ + Sbjct: 171 -KGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQAAW 229 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 I+ A + E+ PH+LRHSC + G D R++Q+ LGH ++ T YT Sbjct: 230 RIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQVYT 284 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 7/170 (4%) Query: 11 NFLTHSEIESLL-KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + L E++ L+ + N R+ + L + G R SE+C L I ID + YI Sbjct: 120 DILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSIDDQ----YIR 175 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 KG P+ ++ + A+ +LS+ R + + + +F++ +G + R + I Sbjct: 176 VYGKGSKERIVPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTLRGKSMDRISIWRSIKE 235 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG++ I PH LRHS L N G D R+IQD LGH NI T YT Sbjct: 236 YAQQAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYT 285 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 25/198 (12%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASE------------ 50 KA+ + + + +E+E LL + T P + R+ + L + G R SE Sbjct: 103 KAEKQLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQFE 162 Query: 51 ICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLS 110 + L+ +A+ I + + + F + + +Q +N L R E+E +FL+ Sbjct: 163 LGYLQCEGKGERARIIPVSSVAQSF------VERYIQQARNGLGGR------ETEALFLN 210 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G LSRQ F+ +I AG+ EI PH+LRHS L G D R IQ LGH ++ Sbjct: 211 GRGGRLSRQGFWKMIKRRAKLAGIEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADL 270 Query: 171 RHTVWYTASNAGRFYGIW 188 T YT N R + ++ Sbjct: 271 ATTQVYTHVNKSRLHDVY 288 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%) Query: 11 NFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +L EIE +++A + P R+ + + + G R SE+C+L I D+DL+ + + Sbjct: 116 KYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDLEYQVLRTT 175 Query: 70 RLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLSRQQFYHIIST 127 K P+ V A++ +L S R S ++F++ +G ++RQ F+ +++ Sbjct: 176 G-KGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTRQGFWKLLAA 234 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 G AG+ + PH+LRHS L G D R +Q LGH +I T YT Sbjct: 235 YGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYT 284 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 10/192 (5%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K + K FL E+ LL+ R+ + L + G R +E+ L+ SD+DL + Sbjct: 107 KIEKKLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDLVS 166 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW-------VFLSRKGNPL 116 + + + K P+ AL+ +L+ + P S+W +F++ KG PL Sbjct: 167 RFVIVCG-KGAKERIVPIGRTAAAALERYLA--DARPRLYSKWRKEQHQFLFINSKGGPL 223 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + II N ++ ++ PH +RH+ + N G D R +Q+ LGH N+ T Y Sbjct: 224 TDRSVRRIIDKYIANLAVAKKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLY 283 Query: 177 TASNAGRFYGIW 188 T R ++ Sbjct: 284 THVTKERLKAVY 295 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 10/184 (5%) Query: 17 EIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLK---AKCIYIHRLK 72 +IE LL AA+ RN + L + G R SE+ + ++ I+L+ KC + K Sbjct: 115 KIEDLLSAADVKTKLGIRNKAILELLYATGARVSEVATISLNGINLEYGYIKC----KGK 170 Query: 73 KGFSTTHPLLNKEVQALKNWLS-IRTSYPHAE-SEWVFLSRKGNPLSRQQFYHIISTSGG 130 PL K A++ +L+ +R ++ S ++FLSR G PL R+ + I+ Sbjct: 171 GSKERIVPLGKKASIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLIVKNCAL 230 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 AG++ I PH LRHS L G D R +Q+ LGH +I T YT N I + Sbjct: 231 KAGITEAISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHLKAIHQK 290 Query: 191 ARGR 194 R Sbjct: 291 FHPR 294 >UniRef50_A0M0Q8 Phage integrase family protein n=3 Tax=Bacteroidetes RepID=A0M0Q8_GRAFK Length = 425 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 11/171 (6%) Query: 14 THSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 + EIE L+ + + + P RNY + L G RAS+I RL+ +++ I I ++K Sbjct: 226 SKEEIEKLIVSVDRSNPQGKRNYAIILFAARLGLRASDISRLKFTELHWDTSTIEIKQVK 285 Query: 73 KGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR----QQFYHIISTS 128 G P+L AL ++L + P +ES +VFL K P ++ Q H++ + Sbjct: 286 TGKELVLPILPDVGNALIDYL--KYGRPKSESPFVFLIAKA-PYAQFHTSQVVTHVVQRA 342 Query: 129 GGNAGLSL---EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 AG+ + + PH LRHS GF + +I + GH++ T +Y Sbjct: 343 YRKAGIDIKGRKFGPHSLRHSLGFRMLEESTALPIISEVFGHKSTESTRYY 393 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 4/170 (2%) Query: 11 NFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + L+ S+++ LL N P R+ + L + G R SE+ L + + L+ + I Sbjct: 114 DSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRII 173 Query: 70 RLKKGFSTTHPLLNKEVQALKNWL-SIRTSY-PHAESEWVFLSRKGNPLSRQQFYHIIST 127 K G P+ + ++++L S R H +S+ VF S++ ++RQ F+H I Sbjct: 174 G-KGGKERLVPMGEMAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRIKL 232 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG+ E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 233 YASRAGIETELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYT 282 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 5/175 (2%) Query: 11 NFLTHSEIESLLKAANTGPHA-ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + LT E++ LL + N RN + L + G R SE+ L+ SDI+L+ C ++ Sbjct: 111 DILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLE-DC-FLR 168 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 + KG P NK + +L R + ++ +F+SR G LSR +F+ + Sbjct: 169 IIGKGSKERLVPFGNKAKFFISIYLKKRRPCLNV-NDHIFISRLGKKLSRIEFWRQLKNI 227 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 N G++ I PH LRHS L G D R +Q+ LGH +I T YT + R Sbjct: 228 AKNVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLDEDR 282 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 71/163 (43%), Gaps = 3/163 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ L L + G R SE L + D D A + + L KG PL + V AL+ Sbjct: 261 RDLALAELLYGSGLRISEALGLDVLDADPSAGVVRV--LGKGSKERMSPLSDTSVDALRE 318 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WL R +F+ +G+ L R+Q II AGL + PH LRHS L Sbjct: 319 WLHFRHHLASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHGLRHSFATHL 378 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 G D R +Q+ LGH + T YT ++D+A R Sbjct: 379 LEAGADLRSVQELLGHARLATTQRYTHLTLAHLIEVYDKAHPR 421 >UniRef50_B9K431 Phage integrase family protein n=4 Tax=Alphaproteobacteria RepID=B9K431_AGRVS Length = 409 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%) Query: 11 NFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 + L +I ++L+ A + P R+Y + +G R+ EIC LRI DID + + I++ Sbjct: 220 SILERDQIAAVLETARADKTPAGLRDYAILQFLATYGLRSGEICNLRIEDIDWRTEAIHV 279 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 K ST+ PL+ +AL +L R+ P ++ +FL + + Y ++ Sbjct: 280 RHHKTRASTSLPLMEPVGEALLAYL--RSGRPVTDAREIFLRTRAPYRKLDKLYSVVRRL 337 Query: 129 GGNAGLSL--EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +AG+ + PH+ RH+ + + + ++I D LGHR+ T Y Sbjct: 338 LRDAGVQPPGKCGPHIFRHARAVEMLRVAVPQKVIGDVLGHRSTGSTAPY 387 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 13/195 (6%) Query: 9 KRN--FLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 KRN FL EI LL + T RN + L + G R SE+ L++S+ID Sbjct: 111 KRNPDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFNQMV 170 Query: 66 IYIHRL--KKGFSTTHPL----LNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 ++IH K + H L K +Q + L I+ +VF+++ GNPL+ + Sbjct: 171 LFIHGKGNKDRYVPFHDYAGEWLIKYIQEARENLMIKNE----GHNFVFVNKFGNPLTNR 226 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +I+ + +IHPH +RHS L N G D R +Q+ LGH N+ T YT Sbjct: 227 GVENIVDRIMRLYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIYTHI 286 Query: 180 NAGRFYGIWDRARGR 194 + ++ +A R Sbjct: 287 SRDHLKEVYLKAHPR 301 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 11 NFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+H E++ LL A + A R+ + L + G R SE+ L+++D++L+ + + + Sbjct: 128 GLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNLETRVL-VA 186 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE-SEWVFLSRKGNPLSRQQFYHIIST 127 R K P+ A+K +L++ R H S+ +F++ +G ++RQ F I+ Sbjct: 187 RGKGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKILDR 246 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AG+ I PH LRHS L G D R +Q+ LGH ++ T YT + + Sbjct: 247 CARRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDRTHVKRL 306 Query: 188 WDR 190 +DR Sbjct: 307 YDR 309 >UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWI0_9PROT Length = 299 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 6/179 (3%) Query: 11 NFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 ++ ++E LL A T P R+ C+ L + G R SE+ L +++ A + + Sbjct: 115 KMMSEHDVERLLAAPETEDPVGLRDRCMLELLYATGVRVSELVSLTRGQVEMDAGLLRV- 173 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 + KG P + Q L+ WL +R + P S ++F R G+ ++RQ F+ I Sbjct: 174 -IGKGDKERLIPFGEEAGQWLQQWLLLRPAKP--ASPYLFAGRGGHAMTRQNFWLRIKRY 230 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AG+ PH LRH+ L N G D R +Q LGH ++ T YT + R + + Sbjct: 231 ATMAGIMPLPSPHTLRHAFATHLLNHGADLRAVQMLLGHAHVTTTEIYTHVSRARMHDL 289 >UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae RepID=XERC_NEIMF Length = 305 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 5/169 (2%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLLNKEVQ 87 P A R++ L L + G R SEI L D+ L ++H KG PL K V+ Sbjct: 137 PLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDE--AWVHVTGKGRKQRQVPLTGKSVE 194 Query: 88 ALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSC 147 ALKN+L +R + ++ + +F R G LS++Q ++ G + PHM+RHS Sbjct: 195 ALKNYLPLRQTA--SDGKALFTGRNGTRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSY 252 Query: 148 GFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L D R +Q+ LGH ++ T YT + ++D A R + Sbjct: 253 AGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIARLYDEAHPRAK 301 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 7/188 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D +T +I LL A +T PH R+ L L + G R SE RL ++DL Sbjct: 116 KIDKNIPTLITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFGNLDLD 175 Query: 63 AKCIYIHRLKKGFST-THPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNPLSRQ 119 CI L KG P+ + V ++ + R S + +F+S+K +SRQ Sbjct: 176 RGCITT--LGKGNKQRIVPMGRESVYWVERYYKEARPLLLKGRSCDALFVSQKKTGISRQ 233 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 234 LAWMIVKEYASQAGIE-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHV 292 Query: 180 NAGRFYGI 187 R + + Sbjct: 293 ANVRLHSV 300 >UniRef50_Q2GEQ3 Tyrosine recombinase XerD n=2 Tax=Neorickettsia RepID=Q2GEQ3_NEOSM Length = 305 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 14/174 (8%) Query: 12 FLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDI----DLKAKCI 66 +LT E+ SLL G P R Y + + + G R SE+ +++SDI + + I Sbjct: 111 YLTKEEVFSLLTFLEAGQPATLRLYAILEILYSSGMRVSELINMKVSDIRPLLNGQQHII 170 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVF--LSRKGNPLSRQQFYHI 124 + + +K P K +Q LK +L TSY + S W+F RK P+SRQ+ + Sbjct: 171 IVGKGRK--ERILPFSKKAIQVLKLYL---TSY-QSNSPWLFPGAGRKDRPMSRQRLGQL 224 Query: 125 ISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + + I PH++RHS L + G+D +++QD LGH I T YT Sbjct: 225 LKELALKCKIDPKRISPHVIRHSFATHLLDNGMDIKVVQDLLGHAQITTTQIYT 278 >UniRef50_B5WFN4 Integrase family protein n=1 Tax=Burkholderia sp. H160 RepID=B5WFN4_9BURK Length = 416 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 16 SEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKG 74 +++ LL + P R+ + LL ++G R+ E+ RLR+ D+D + + + I K G Sbjct: 234 QDVQRLLNTTEGSRPTDIRDRAILLLLAVYGLRSGEVRRLRLEDLDWEQETLTITHSKSG 293 Query: 75 FSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKG--NPLSRQQFYHIISTSGGNA 132 S T+PL QA+ +L + P +FL + PL+ + +++ Sbjct: 294 RSQTYPLSRTAGQAIIRYL--KEVRPQCSCREIFLPMRAPLRPLNSSAIFQLVNRRMKAL 351 Query: 133 GLSLEIH-PHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 + + H PH LRH+C L N G+ + I D LGHR++ T Y + R + Sbjct: 352 DIPVLHHGPHALRHACATRLINQGLPLKAIADQLGHRSLETTRIYAKVDLPRLREV 407 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 13 LTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L ++E LL +++T P R+ + + + G R +E+ L++ D+ L +I + Sbjct: 112 LNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLHLHMG--FIQTI 169 Query: 72 KKGFST-THPLLNKEVQALKNWLS---IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 KG PL L+ +L + P +++VFL+ G L+RQ F+ I+ Sbjct: 170 GKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKILKG 229 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 +G+ I PH LRHS L G D R +Q+ LGH +I T YT R + Sbjct: 230 IAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRLKDV 289 Query: 188 W 188 + Sbjct: 290 Y 290 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 23/197 (11%) Query: 13 LTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 LT E+ +L + +T R+ + L + G R SE+ L++SD+ L+ ++ + Sbjct: 110 LTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELG--FLQTI 167 Query: 72 KKGFSTTHPLLNKEV-----QALKNWLSIRTSYP----HAES---EWVFLSRKGNPLSRQ 119 KG NK+ QA NW+ +Y ES E++FL+ +GN +RQ Sbjct: 168 GKG--------NKQRIIPIGQAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ + AG+ ++ PH LRHS + G D R++Q+ LGH +I T YT Sbjct: 220 GFWKNLKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTHL 279 Query: 180 NAGRFYGIWDRARGRQR 196 R I+ +A R + Sbjct: 280 TNERMKEIYQQAHPRAK 296 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 10/193 (5%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K L+ E++ L++ N P R+ + L + G R SE+ L++ D++ Sbjct: 103 KIKRKLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPT 162 Query: 63 A---KCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE-WVFLSRKGNPLS 117 A +C+ R ++ P+ + ++ +L+ +R S E +FL+ +G PLS Sbjct: 163 AGFLRCMGKGRKERII----PVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLS 218 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ F+ I+ A L E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 219 RQGFFKILGNYVEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYT 278 Query: 178 ASNAGRFYGIWDR 190 R ++ + Sbjct: 279 HLTKSRLREVYQQ 291 >UniRef50_Q2JAI1 Phage integrase n=2 Tax=Actinomycetales RepID=Q2JAI1_FRASC Length = 322 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 9/182 (4%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH-RL 71 LT E +L+AA P + R+ + L + G R +E+ L + D+ + A+ +H R Sbjct: 136 LTDDEARRVLRAAERLP-SLRDRTIIELLYNTGVRCAELVALDLDDVPVTARTGAVHVRA 194 Query: 72 KKGFS----TTHPLLNKEVQALKNWLSIRTSYPHAESE-WVFLSRKGNPLSRQQFYHIIS 126 KG T P + +AL +W R ++P+AE++ +FL+R G LS + +++ Sbjct: 195 GKGRDGGKPRTIPANPRARRALTDWKPARAAWPNAEADPALFLNRYGRRLSTRTVDQVVA 254 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT-ASNAGRFY 185 G + G+ ++ PH+LRH+ A+ G D L+ + LGH T YT + A R Sbjct: 255 DLGRSVGID-DLTPHVLRHTFATAMLRRGADLVLVAELLGHARTDTTRVYTKPTEADRLR 313 Query: 186 GI 187 + Sbjct: 314 AV 315 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 7/187 (3%) Query: 11 NFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FLT + L++A + R+ + L + G R SE+C L + D+DLK I + Sbjct: 108 KFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIKV- 166 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRT-----SYPHAESEWVFLSRKGNPLSRQQFYHI 124 R K P+ K +ALK +L+IR + +F++ +G +S +Q I Sbjct: 167 RGKGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRISDRQVRRI 226 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 + G+ +I PH LRH+ L G D R+IQ+ LGH ++ T YT + Sbjct: 227 VEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHVDLKHL 286 Query: 185 YGIWDRA 191 ++D++ Sbjct: 287 IEVYDKS 293 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 7/178 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D +T +I LL A +T PH R+ L L + G R SE L ++DL Sbjct: 99 KIDKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLD 158 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQ--ALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQ 119 CI L KG + +E + + R + S + +F+S+K +SRQ Sbjct: 159 RGCITA--LGKGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISRQ 216 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 217 LAWMIVKEYASQAGIG-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYT 273 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%) Query: 13 LTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ E+ L +A + P R+ + + + G R SE+ L++ ++L + + I Sbjct: 113 LSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYV-IAYG 171 Query: 72 KKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE-----WVFLSRKGNPLSRQQFYHII 125 K PL + ++ LK +LS +R PH E +FL+ +G ++RQ+F+ +I Sbjct: 172 KGAKERLIPLGHYAIEYLKEYLSRVR---PHFVKENRPCDDLFLTIRGTGMTRQRFWQLI 228 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFY 185 G ++ + PH+LRHS + + G D R +Q+ LGH +I T YT R Sbjct: 229 KNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNHRLK 288 Query: 186 GIWDRARGR 194 I+D++ R Sbjct: 289 AIYDKSHPR 297 >UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS58_LAWIP Length = 313 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 6/189 (3%) Query: 7 NKKRNFLTHSEIESLLKAANTGPHAA---RNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 N + FL ++LK ++TG A RN L L + G R SE L +SDI + Sbjct: 116 NVDQVFLLLKGANNILKTSHTGLELAIAHRNNALLELLYGSGLRISEALCLNVSDI--RT 173 Query: 64 KCIYIHRLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + ++ + KG PL + + AL+ WL+IR + +F+ +G L R+Q Sbjct: 174 EDGFVRVIGKGNKERLAPLSDTSIVALEEWLAIRHMVATLGEQALFVGVRGKRLHRRQTI 233 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I+ AGL L PH LRHS L G + R +Q+ LGH + T YT Sbjct: 234 RILEELCLQAGLPLTTAPHTLRHSFATHLLEGGANLRAVQELLGHARLSTTQRYTHITLD 293 Query: 183 RFYGIWDRA 191 + +D+A Sbjct: 294 KLIQAYDKA 302 >UniRef50_B1FUW0 Integrase family protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1FUW0_9BURK Length = 408 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 16 SEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKG 74 ++++ +L T P RN + +L I+G R E+ LR+ ++ + +++ RLK+ Sbjct: 224 TDVQQILATTATDKPADIRNRAILMLLSIYGMRRGEVVALRLDQVNWAGRTLHVFRLKRR 283 Query: 75 FSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKG--NPLSRQQFYHIISTSGGNA 132 +PLL +AL ++ I T P A + +FL PL+ Q + +++ Sbjct: 284 QPQVYPLLPTVAEALASY--IDTVRPPASAPQIFLGLHAPHRPLTPQAVFDLVNDRFKAL 341 Query: 133 GLSLEIH-PHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 G+ ++ PH LRH+C L + G+ + I D+LGH + T+ Y Sbjct: 342 GIEVKHRGPHALRHACAARLVDQGLSLKEIGDHLGHHSASATMTY 386 >UniRef50_Q01TI9 Phage integrase family protein n=6 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TI9_SOLUE Length = 301 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 L+ E+ L+ AA R+ + + + G R +E+C LRI DID + ++I + Sbjct: 109 TVLSRDEVARLIAAAGN----LRHRTILMALYATGMRRAELCHLRIEDIDKERMVLHIRQ 164 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLS----RKGNPLSRQQFYHIIS 126 K G PL K + L+ + PH S WVF S R P++ + +H Sbjct: 165 GKGGKDREVPLPPKLLAQLRIHYR---ALPH-RSAWVFPSLQSRRPDQPMTEKAVWHACR 220 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + AG++ +HPH LRH L + G + +IQ LGH + R T+ Y Sbjct: 221 QAAWRAGITKSVHPHTLRHCFATHLLDNGAELPVIQVLLGHSDPRDTMIY 270 >UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase family n=2 Tax=Methanobrevibacter smithii RepID=A5UKA5_METS3 Length = 302 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%) Query: 11 NFLTHSEIESLLKAANTGPHAA---------RNYCLTLLCFIHGFRASEICRLRISDIDL 61 NFLT E++ LL + ++ R+ + L + G R SE+ L + +++ Sbjct: 128 NFLTQKEVKQLLDSITWDENSDSDFRIITKLRDKLIVTLLYSSGLRVSELINLSVDNVNF 187 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + K + I + K S L Q ++ +L RT +S ++ +++ GNPL+ + Sbjct: 188 EGKQLSI--VGKNNSRVILLDESTKQLIQKYLEKRT----QKSNYLVVNKSGNPLTPRYV 241 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +I G +G+ +I PH+LRHS L G++ ++IQ LGH N+ T Y+ Sbjct: 242 QLMIKKYGNESGIEKKITPHILRHSYATHLFEQGVNIKIIQQLLGHSNLSTTQIYS 297 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 4/187 (2%) Query: 13 LTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 LT E+ +++ N+ P RN L L + G R EI L ++D+DL Y+ Sbjct: 108 LTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQG--YVRVT 165 Query: 72 KKGF-STTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 KG PL + +LK +L +SE +FL+++G L+ + ++IS Sbjct: 166 GKGRRQRIVPLGKYALDSLKLYLEAGRPAFKPKSEKLFLNQQGAGLTVRGIRYLISQIVK 225 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 AGL+ +I PH RHS L G D R +Q+ LGH+ + T YT + R ++ R Sbjct: 226 KAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLSKERLREVYLR 285 Query: 191 ARGRQRH 197 R R Sbjct: 286 THPRSRE 292 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + K L+ E+E LL+ R+ + L + G R SE+ L + D++L+ Sbjct: 104 KVEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNLE 163 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQ 120 + YI K P+ + V AL+ +L+ + + + +F++ G L+RQ Sbjct: 164 MQ--YIRCNKGARERIVPIGSVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQG 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ II A ++ +I PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 222 FWKIIKQYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQLA 281 Query: 181 AGRFYGIWDRARGR 194 R I+ + R Sbjct: 282 KNRIKEIYKKTHPR 295 >UniRef50_UPI0001B49322 site-specific recombinase, phage integrase family protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B49322 Length = 537 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 5/183 (2%) Query: 11 NFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +F+ ++ ++ +L++ +T R+Y + LL ++G R SE+ +++ DID + + +Y+ Sbjct: 349 SFVPYNIVQQILQSKKDTAGIGVRDYAILLLLSVYGLRCSEVTNMKLKDIDWRNETLYLR 408 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKG--NPLSRQQFYHIIST 127 R K PLL A+ ++ + ++ E++FL ++ LS Y+++ Sbjct: 409 RAKNCRPQVLPLLPIVGNAIVRYIK-EVRFNKSKKEYLFLCKRAPHEQLSTSTIYNLVKK 467 Query: 128 SGGNAGLSLEIH-PHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 + GL L + PH LRH+C L N G + I D LGH + T Y + Sbjct: 468 ELKDKGLELRHYGPHSLRHTCATHLINTGHSLKEIADLLGHVGLDTTRIYAKVDIKNLRK 527 Query: 187 IWD 189 + D Sbjct: 528 VAD 530 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 4/193 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 KA K L E L++ P R+ L L + G R SE+C LR D+DL + Sbjct: 128 KAPRKLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDS 187 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 + + K G P+ + V AL+ W R S A++ VF R G +S++ Sbjct: 188 GLVTVLG-KGGKQRLVPVGSHAVAALRAWQ--RDSGGSAQTH-VFPGRAGGAISQRAVQI 243 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I G+ +HPHMLRHS + D R +Q+ LGH +I T YT + Sbjct: 244 RIKQLAVRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQH 303 Query: 184 FYGIWDRARGRQR 196 ++D A R + Sbjct: 304 LAKVYDAAHPRAK 316 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 8/172 (4%) Query: 12 FLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 F EIE + + + RN L + + G R SE+ L + +DL I + Sbjct: 111 FFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIILV-- 168 Query: 71 LKKGFSTTH-PLLNKEVQALKNWLS----IRTSYPHAESEWVFLSRKGNPLSRQQFYHII 125 + KG + P+ + AL+ +L + E +VF++ G+PL+ +I+ Sbjct: 169 IGKGSKERYVPIGDFARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGVRYIL 228 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +GL+L+IHPHMLRH+ L N G D R +Q+ LGH ++ T YT Sbjct: 229 EKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYT 280 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 10/199 (5%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-----PHAARNYCLTLLCFIHGFRASEICRLRISD 58 KA + L + L+AA +G P A R+ + + + G R SE+C L + D Sbjct: 103 KARRTLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVDD 162 Query: 59 IDLKAKCIYIHRLKKGFST-THPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 +D + + + L KG T P AL WL R + A+S + L +G Sbjct: 163 VDTSRRLLRV--LGKGNKQRTVPYGEPAHAALTAWLHEGRPALATADSGPALLLGARGKR 220 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L +Q ++ + G + +I PH LRHS L G D R++Q+ LGH ++ T Sbjct: 221 LDPRQARTVVHQTVSAVGGAPDIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQL 280 Query: 176 YTASNAGRFYGIWDRARGR 194 YT R + D+A R Sbjct: 281 YTHVTVARLRAVHDQAHPR 299 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 4/170 (2%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLLNKEVQ 87 P R+ + L + G R +E+ + I D+ + + + L KG P N + Sbjct: 128 PIEVRDKAMMELLYSSGIRLAELSAMDIDDLSFSDQSLRV--LGKGNKVREVPFGNSSKK 185 Query: 88 ALKNWLSIRTSYP-HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHS 146 L WL R ++ +++ + +FLS++GN L+ + ++ G GL+ +HPH LRHS Sbjct: 186 VLSLWLKERNNFAKNSDEKALFLSQQGNRLTNRAIQQRLAHWGKKLGLNDRLHPHKLRHS 245 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 C + D R +Q+ LGH +I T YT + +D A R R Sbjct: 246 CATHVLESSSDLRAVQELLGHASISTTQIYTHLDFQHLAKTYDAAHPRAR 295 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 11 NFLTHSEIESLLKAANTGP--HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 L+ E+++L+ AA+ A R CL + + G R SEI LR+ + K I Sbjct: 109 KILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQ-KDPAYLI 167 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNP-LSRQQFYHI 124 + K G PL A+K++L IR + +A+ + ++F SR L+R++ + Sbjct: 168 VKGKGGTERLVPLNPSARAAIKDYLDIRPLFLNAKDKANPYLFCSRGAEGHLTRRRVGQL 227 Query: 125 ISTSGGNAGLS-LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + AG+ + PH+LRH+ L G D R++Q LGH +I T YT Sbjct: 228 LDEAALEAGIDPARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQVYT 281 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 5/167 (2%) Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQAL 89 A R+ + L + G R SE+ L ++D+DL + H KG T P+ + QAL Sbjct: 149 ALRDQAMFELLYSCGLRLSELTGLDLADLDLGEGLLTAH--GKGNKTRILPIGRQARQAL 206 Query: 90 KNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 + WL+IR S P + VF + G LS +Q + G +HPHMLRHS Sbjct: 207 ERWLAIRPSQPGEGA--VFTGKSGRRLSGRQVEKRLEQWAQRHGSDRHVHPHMLRHSFAS 264 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L D R +Q+ LGH N+ T YT+ + ++D R + Sbjct: 265 HLLQSSGDLRAVQELLGHANLSTTQIYTSLDFQHLAKVYDATHPRAK 311 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 6/184 (3%) Query: 12 FLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 FLT +I +LL+A R+ + + G R SE+ L +SD D A I + Sbjct: 123 FLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWDQDANIIRV-- 180 Query: 71 LKKGFST-THPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQQFYHIIST 127 L KG P+ + +AL +WL R + P H +S+ +FL+R L+ + ++ Sbjct: 181 LGKGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTSRSVGRMLEK 240 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 GL + PH LRH+ L + G D R +Q+ LGH+++ T YT + R Sbjct: 241 YLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTHVSTKRLLET 300 Query: 188 WDRA 191 +++A Sbjct: 301 YEKA 304 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 5/177 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D K L+ EI ++K+ + + P RN + LL G R SE+ L I+DI+ Sbjct: 98 KTDKKLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINHS 157 Query: 63 AKCIYIHRLKKGFST-THPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + KG PL + + +++ + R+ + ++W+F+ G ++R+ Sbjct: 158 VSNVSV--VGKGNKERLIPLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTREN 215 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 FY+I+ AG+ PHMLRH+ L D R IQ LGH++I T YT Sbjct: 216 FYNILQKLVIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYT 272 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 11/201 (5%) Query: 4 KADNKK-RNFLTHSEIESLLKAAN--TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 ++ NKK FL +E+ L+AA RN L L + G R EI L S ID Sbjct: 105 RSSNKKLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFEITNLTFSQID 164 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLS 117 ++ + I K P + +LK +L R SE ++F++ +G L+ Sbjct: 165 FNSQIVDITGKGKK-QRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY- 176 +I+ + L+ IHPHMLRHS L N G D R +Q+ LGH ++ T Y Sbjct: 224 ETGAEYILKQVSKRSKLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYT 283 Query: 177 --TASNAGRFY-GIWDRARGR 194 T N Y +DRA+ R Sbjct: 284 HITTENLQENYKKFFDRAKIR 304 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 6/192 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D K F++ ++ E LL +T R+ + + G R SE+ + I+DID Sbjct: 111 KTDKKLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADIDFH 170 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + R K P+ N + A++ +L R A++E +FL++ L+ + Sbjct: 171 SGIVKV-RGKGSKERILPVGNHALNAIQLYLEKR----KADNEALFLNKFHGRLTERSVA 225 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 +I A + L + PH RHS L + G D R +Q++LGH ++ T YT Sbjct: 226 RMIEKYMKKAAMHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVTTE 285 Query: 183 RFYGIWDRARGR 194 R ++D+ R Sbjct: 286 RLKQVYDKTHPR 297 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 11/182 (6%) Query: 4 KADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K +K +F E+ L +A G RN + + + G R SE L+ SDID Sbjct: 102 KQSDKLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDIDF 161 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKN-----WLSIRTSYPHAESEWVFLSRKGNP 115 + I + L KG + P +AL+N W + Y + +VF++ P Sbjct: 162 SMQTILV--LGKGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHN-FVFINHYAKP 218 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 ++ +I++ + L+ +IHPHMLRHS AL N G D R +Q+ LGH ++ T Sbjct: 219 ITTTGIEYILNQVITASSLNGKIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQI 278 Query: 176 YT 177 YT Sbjct: 279 YT 280 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 7/179 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + + L+ EIE ++ G P RN + + G R SE+ L+IS + Sbjct: 122 KTKRQLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHFD 181 Query: 63 AKCIYIHRLKKGFST-THPLLNKEVQAL---KNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 A +I + KG P+ + V+ + K+ + + + + +FL+R+G+ L+R Sbjct: 182 AG--FIRVVGKGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTR 239 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + +I AG+ ++ PH RHS L G D R +Q+ LGH +I T YT Sbjct: 240 VMIFLVIKELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYT 298 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 17/173 (9%) Query: 13 LTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA---KCIY 67 ++ E+ LL AA+ P R+ + + + G R SE+ L + DI+L KCI Sbjct: 118 ISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINLDESHLKCI- 176 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP----HAESEWVFLSRKGNPLSRQQFYH 123 +G + PL V LK L + S P + + +F++ +G L+RQ F+ Sbjct: 177 ----GRGKTRKVPLSQPAVDVLK--LYLERSRPLLVRGQDEQALFVNHRGQRLTRQGFWL 230 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 I+ AG+ I PH LRHS + + GID R +Q++LGH +I T Y Sbjct: 231 ILKAYASEAGIK-GITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVY 282 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 7/169 (4%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI--YIHR 70 LT EI LL R + L + G R SE+ LRI ++LK K + Y Sbjct: 108 LTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVNLKDKWVLAYGKG 167 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQQFYHIISTS 128 K+ F H ++ V+ L+ +LS R Y + + +F+++ G +SR + ++ Sbjct: 168 AKQRFIPIH---DRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISRMSVWKDVNDL 224 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 G AG+ +HPH+ RH+ L G D R +Q+ LGH +++ T YT Sbjct: 225 GRLAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYT 273 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + K LT E E LL+A P R+ + L + G R SE+ L D++L+ Sbjct: 102 KVEKKPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNLE 161 Query: 63 AKCIYIHRLK----KGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRKGNP 115 +H L+ +G P + L +L S+ E+ +F +R+G Sbjct: 162 -----LHFLRCTGERGKERILPFGGVTAEWLDLYLREGRSHLILDERENPALFPNRRGGR 216 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +SRQ F+ ++ G AG++ +I PH LRHS L G D R +Q+ LGH + Sbjct: 217 ISRQGFWKLMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQM 276 Query: 176 YTASNAGRFYGIWD 189 Y + + ++D Sbjct: 277 YVSRSRSNLKTVYD 290 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 5/165 (3%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ + L + G R +E+ L I DID + + I KG T P K ++L N Sbjct: 142 RDKAMLELLYSSGLRLAELQGLTIKDIDFNRQLVRI--TGKGNKTRIVPFGKKAKESLLN 199 Query: 92 WLSIRTSYP--HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 WL I + ++ VF+S++G L+ +Q + AG+++++HPH+LRH Sbjct: 200 WLKIYNIWKGHFDQNASVFISQRGGALTPRQIEKRVKLQAQRAGVNVDLHPHLLRHCFAS 259 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 + + D R +Q+ LGH N+ T YT + ++D+A R Sbjct: 260 HMLSSSGDLRSVQEMLGHSNLSTTQIYTHIDFDHLAQVYDQAHPR 304 >UniRef50_B9L0I5 Tyrosine recombinase xerD n=2 Tax=Thermomicrobia (class) RepID=B9L0I5_THERP Length = 331 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%) Query: 17 EIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKG 74 E+E L+ AA++ P R+ + + G R SE+ L + D+DL + + R G Sbjct: 133 EVEQLIAAASSDRTPEGLRDRAMLITLATTGLRVSELTALDVRDVDLDRGELIVRR-PNG 191 Query: 75 FSTTHPLLNKEVQALKNWLSI-RTSYPHAESEW-VFLSRKGNPLSRQQFYHIISTSGGNA 132 PL + ++AL+++L R + + E +FL+ +G+ L+RQ F+ I+ A Sbjct: 192 RERVVPLAREAIEALRDYLERGRPGFTTLKGEQALFLNHRGSRLTRQGFWLILKNYAAAA 251 Query: 133 GLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 GL E+ PH LRHS G D R +Q LGH + T Y Sbjct: 252 GLP-EVTPHTLRHSFAVRALVDGWDLRDLQRVLGHVSPATTQVY 294 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 3/160 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGF-STTHPLLNKEVQALKN 91 R+ L L + G R SE L + D+ L ++ + + + KG PL + LK Sbjct: 209 RDLALAELLYGSGLRISEALSLDVDDVQLSSRVLRV--MGKGSRERLAPLSDTSFSCLKA 266 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WL R + +F+ +G L+R++ I+ AGL+ + PH LRHS L Sbjct: 267 WLEERPLLALPDEAALFVGARGARLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHL 326 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 G D R +Q+ LGH+ + T YT + +D+A Sbjct: 327 LEAGADMRSVQELLGHQRLTTTQRYTQVSLESLMQTYDQA 366 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 2/197 (1%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K+ K L+ ++ +L+ T R+ + + G R SE+ + +SDID Sbjct: 99 KSQKKLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTNE 158 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQFY 122 + + + F PL K ++AL W+ R + E++FL+++G L+ + Sbjct: 159 QTLKVLGKGNKFRIV-PLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARAIQ 217 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 + + + IHPH+LRHS + D R +Q+ LGH NI T YT + Sbjct: 218 YRLKFWAQKNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLDFQ 277 Query: 183 RFYGIWDRARGRQRHAV 199 I+D+A R + + Sbjct: 278 HLSKIYDQAHPRSKKKI 294 >UniRef50_Q01RK4 Phage integrase family protein n=4 Tax=Bacteria RepID=Q01RK4_SOLUE Length = 363 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 10/182 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 +A + ++L + EI+++LKA + T P +R+Y L F G R EI LR D+ L Sbjct: 119 KRARQRAMDYLEYDEIDAILKAIDRTTPQGSRDYALLATMFNTGGRVQEIADLRACDLQL 178 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 K + KG + PL + L+ + RT +ES VFL+ +G PL+R Sbjct: 179 -TKPFQVRLFGKGRKERYCPLWPQTAAVLRAFSDQRTLDLRSESR-VFLNHRGRPLTRFG 236 Query: 121 FYHIISTSGGNAGLSLE------IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 +I++ G A + +HPH +RHS AL G+D I LGH + T Sbjct: 237 IRYILAKCLGLACADVPNLRTKRLHPHSVRHSTAVALLKSGVDLSSISHLLGHASPTTTN 296 Query: 175 WY 176 Y Sbjct: 297 RY 298 >UniRef50_A4XJF9 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJF9_CALS8 Length = 286 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Query: 32 ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQA-LK 90 AR+ L G R SE L++ DI++ + + KG S LN + + L Sbjct: 129 ARDIAFVELLLNTGMRISEAINLKLEDIEISERKGKVKIWGKGRSYREVPLNSDARKYLS 188 Query: 91 NWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 +L R P++E+ ++F++ G PL+R Y II A S+++HPHMLRH Sbjct: 189 EYLKKR---PYSETNYLFVTSTGKPLTRNTAYKIILKYAKLA--SVDLHPHMLRHFFAQT 243 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 L + G++ +Q LGH+ I T+ Y N Sbjct: 244 LIDKGLNLYDVQQLLGHQRIETTLRYKKPNV 274 >UniRef50_A3M0R9 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M0R9_ACIBT Length = 310 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 7/150 (4%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ L + + G R EI L+I ++++K K + + KG T PL +K ++A Sbjct: 137 RDLALIEIAYSCGLRLEEIHSLQIENVEVKRKQVRV--TGKGNKTRIIPLGSKAIEAYLE 194 Query: 92 WLSIRTSYPHAESE----WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSC 147 WL +R + ++ +VF++ G LSR Q I + AG ++ +PHMLRHS Sbjct: 195 WLPLREEIMNKDTNQKHNYVFVTTTGAQLSRVQINKRIKNAFKLAGYPIQSNPHMLRHSF 254 Query: 148 GFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 L N + R IQ+ LGH N+ T YT Sbjct: 255 ATHLINNSVGIREIQEMLGHSNLNTTQIYT 284 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 6/186 (3%) Query: 11 NFLTHSEIESLLKAANTGPHA-ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FLT E+ +LL + T RN + L + G R SE+ L + DID ++ + + Sbjct: 117 QFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDRESHLVRV- 175 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 R K P+ ++ ++A+ ++ RT E +FL+R + S ++S Sbjct: 176 RGKGNRERLVPVGDRALKAVDDY---RTCI-DGEFGALFLNRDAHRFSDSSIRRVLSVLV 231 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 GL + + PH LRHS + + G D R IQ+ LGH ++ T YT R ++D Sbjct: 232 KACGLGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTHVTYARLMEVYD 291 Query: 190 RARGRQ 195 RA R+ Sbjct: 292 RAHPRR 297 >UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV23_9GAMM Length = 345 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 8/182 (4%) Query: 21 LLKAANTGPHAAR----NYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFS 76 L +AA H AR + + L + G R E+ L +SDID + + + L KG Sbjct: 165 LDQAAPEDSHEARLWIRDKAMLELLYGSGLRVGELVGLNMSDIDKSQRLLRV--LGKGGK 222 Query: 77 T-THPLLNKEVQALKNWLSIRTSYPHAESEWVFLS-RKGNPLSRQQFYHIISTSGGNAGL 134 T P+ K QAL N+L R+ + + VF+S R G +S + I AG+ Sbjct: 223 TRIVPIGEKAWQALINYLPHRSLWVEEQDPAVFVSERYGTRISTRTVQLRIKLQAKRAGV 282 Query: 135 SLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 + +++PH+LRH + + D R +Q+ LGH +I T YT + G ++D+A R Sbjct: 283 AQDLYPHLLRHCFASHILSDSGDLRGVQELLGHSDISTTQIYTHLDFGHLSQVYDKAHPR 342 Query: 195 QR 196 R Sbjct: 343 SR 344 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 10/184 (5%) Query: 13 LTHSEIESLLKAAN---TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+ SE+ LL AA P A RN + L + G R +E+C L + +D A Y+ Sbjct: 152 LSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSVD--AGLGYVR 209 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSI-RTSYPHAESE---WVFLSRKGNPLSRQQFYHI 124 L KG P+ + ++A+ +L R + + E +FL+ +G LS + I Sbjct: 210 VLGKGGKERIVPVGEQALEAISRYLKQGRPALARRQREVSPALFLNHRGRRLSVRGAQDI 269 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 +S A L I PH LRH+ L + G D R +Q+ LGH + T YT +A R Sbjct: 270 LSRIADGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQIYTHVSAERL 329 Query: 185 YGIW 188 I+ Sbjct: 330 KEIY 333 >UniRef50_B0T9L5 Integrase family protein n=1 Tax=Caulobacter sp. K31 RepID=B0T9L5_CAUSK Length = 268 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 12/151 (7%) Query: 45 GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES 104 G RASE+ +LRI D+ L + + I K G P+ Q L+ + R + P Sbjct: 81 GARASELVQLRIEDVSLAERVVTIREGKGGKRREIPIRRDLAQLLQLHIGARRAGP---- 136 Query: 105 EWVFLSRK--GNP----LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDT 158 +F SR+ P L+RQ+ ++ +AG++ ++PH+LRH+ L +G+D Sbjct: 137 --LFASRQQGSGPTPHVLTRQRIGQVVREVARDAGITKRVYPHLLRHTVATRLLALGMDI 194 Query: 159 RLIQDYLGHRNIRHTVWYTASNAGRFYGIWD 189 +Q +LGH +I T Y + A +D Sbjct: 195 TDLQRFLGHESITTTRLYAETTAATLQRKFD 225 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 5/189 (2%) Query: 11 NFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL--KAKCIY 67 + L+ EI +L+++ A A RN L L + G R SE+ L + DI + I Sbjct: 171 DTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITALEETDGIL 230 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLS-RKGNPLSRQQFYHII 125 + K P+ + QA+ +L R +S +FL+ R G +SRQ + ++ Sbjct: 231 VLTGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAMSRQSAWQVV 290 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFY 185 + AG++ +I PH LRHS L G D R +Q+ LGH ++ T YT A Sbjct: 291 KQAATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTHITADSLR 350 Query: 186 GIWDRARGR 194 +W A R Sbjct: 351 AMWRTAHPR 359 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 4/169 (2%) Query: 12 FLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 FL E+E L+ + + R+ + + G R SE+ L++ D+D+ + + + Sbjct: 108 FLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMHREIMKVTG 167 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIR--TSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 K P+ + +K +L IR + + W+FLSR G L R+ + II Sbjct: 168 -KGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDREYVWMIIKKY 226 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG+ + PH LRHS L G D R IQ LGH ++ T YT Sbjct: 227 CERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYT 275 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 8/181 (4%) Query: 11 NFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI- 68 + LT E+ ++L + R+ + L + G R SE+C LR D D +A + + Sbjct: 131 DVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVF 190 Query: 69 -HRLKKGFSTTHPLLNKEVQA-LKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 K+ H + V A L++W R ++ E +FL+R G LSRQ + ++ Sbjct: 191 GKGAKERIVPVHHVSCALVTAYLRDW---RPAFSPVEPA-MFLNRSGKGLSRQAVWKVVK 246 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 AG+ +I PH RHS L G D R +Q LGH +I T YT A R Sbjct: 247 RHVAEAGIHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRR 306 Query: 187 I 187 I Sbjct: 307 I 307 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 16/184 (8%) Query: 13 LTHSEIESLLKAANTGPHAA----RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 L+ +E+E LL A P A+ RN+ + L + G R SE+ +L ++ ++ + ++ Sbjct: 172 LSSAEVEQLL--APPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN---QAGHL 226 Query: 69 HRLKKGFST-THPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLSRQQFYH 123 L KG P QA+ +++ + P S+++F++ +G ++R +F+ Sbjct: 227 RILGKGSKERLVPFGEAARQAMAVYIT--QARPRLLKKRRSDFLFVTGRGTAMTRLRFWQ 284 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I+ S G++ EI PH+LRHS L G D R +Q LGH +I T YT + R Sbjct: 285 IVRKSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTHVDTNR 344 Query: 184 FYGI 187 I Sbjct: 345 LKAI 348 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 13/182 (7%) Query: 4 KADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K N LT EI+ +L P A R+ + + + G R +E+C + SDI Sbjct: 103 KIPRKLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTELCDFKTSDILWD 162 Query: 63 AKCIYIHRL--KKGFSTTHPLLNKEVQALKNWL-----SIRTSYPHAESEWVFLSRKGNP 115 ++ I + K+ F P+ + LKN+L ++ P+ VFLSR G Sbjct: 163 SEMIRVQGKGSKQRFVPIGPIAR---ENLKNYLNHERNTLADKNPNVAE--VFLSRNGRK 217 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+R + ++ +A + E+ PH LRHS L G D R +Q+ LGH +I T Sbjct: 218 LTRMMIWVLLKKWTESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQV 277 Query: 176 YT 177 YT Sbjct: 278 YT 279 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 6/197 (3%) Query: 4 KADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K + + +EIE +L ++ RN + + G R SE+ L++SD+D Sbjct: 106 KTEKKHKLPFSEAEIEKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDF 165 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQ 119 + K I + L KG + P++ + LK +L +R + +S +++FL + G + Sbjct: 166 EQKQIKV--LGKGDKERYIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYST 223 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Y II++ ++ PH+LRHS L + G D +++ LGH ++ T YT + Sbjct: 224 LVYRIINSYFSVVTTKKDVSPHVLRHSFASHLLDNGADLYTVKELLGHSSLASTQVYTNT 283 Query: 180 NAGRFYGIWDRARGRQR 196 + + +A R + Sbjct: 284 SLAELKKQYKKAHPRAK 300 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ +++ESLL A +T R+ + + + G R SE+ L + ++L A + I Sbjct: 125 LSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVNLNAGWLQI--T 182 Query: 72 KKGFST-THPLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNPLSRQQFYHII 125 KG T PL AL ++L+ + + VFL+ +G ++RQ F+++I Sbjct: 183 GKGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGYMTRQNFWYMI 242 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 AG+ ++ PH LRH+ L N G D R +Q LGH ++ T YT R Sbjct: 243 KKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTHVATARL 301 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 9/176 (5%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDID---LKAKCIYIHRLKKGFSTTHPLLNKE 85 P R+ + + + G R E C L + DID L + + + R K G PL + Sbjct: 186 PLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKGGKERIVPLGRQA 245 Query: 86 VQALKNWLSIRT--SYPHA---ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHP 140 V AL +L++R P + +FLS +G L+ + +I + G + E P Sbjct: 246 VAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVG-AYEATP 304 Query: 141 HMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 H LRHS L + G+D R IQ+ LGH ++ T YT + ++D + R R Sbjct: 305 HALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHPRAR 360 >UniRef50_A6M1R6 Phage integrase family protein n=11 Tax=Clostridium RepID=A6M1R6_CLOB8 Length = 199 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 12 FLTHSEIESLLKA-ANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +LT E+ SL A N+G H+ R+ + L + G RASEI L++ + ++ IY Sbjct: 11 YLTQKEVLSLFNAIENSGKLHSTRDLAIFRLAYRCGLRASEISMLKLENYNINKGEIYCK 70 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 RLK + T L K L + I + +ES+ +F S+K P+SRQ H+ Sbjct: 71 RLKGSKNNTLRLDEKTKSVLDKY--ITENEITSESQTIFTSQKNKPISRQTLDHLTKQYF 128 Query: 130 GNAGLSLEI--HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 A + + H H ++H+ LA +D + +Q +LGH+++ +T Y + + Sbjct: 129 SMASIQDKSKHHFHTIKHTTAVHLAECDMDIKELQWWLGHKSVTNTEIYFQFTTKQQEKM 188 Query: 188 WDRARGR 194 + + G+ Sbjct: 189 YAKLEGK 195 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 8/177 (4%) Query: 17 EIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGF 75 +I+ LL A + P+ R+ L + + G RASE+ LR+ D+ L Y+ KG Sbjct: 109 KIDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLRMDDVHLDEG--YVKCEGKGS 166 Query: 76 ST-THPLLNKEVQALKNWLS---IRTSYPHA-ESEWVFLSRKGNPLSRQQFYHIISTSGG 130 PL K + +K +L R S + ++ ++FLSR G LSR + ++ Sbjct: 167 KQRIAPLAQKSARVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSRIAIWELVKKYAA 226 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AG+ ++ PH LRHS L G D R +Q+ +GH +I T YT + R + Sbjct: 227 RAGIDPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTHVDQSRLKKV 283 >UniRef50_C8NZN0 Integrase/recombinase XerD n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZN0_ERYRH Length = 304 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 4/149 (2%) Query: 34 NYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLLNKEVQALKNW 92 +Y + LL + G R SE L S + L K + I L KG PL + L + Sbjct: 131 DYAILLLLYRCGLRVSECVHLEFSQVYLDQKWLRI--LGKGNKERMIPLSIDAIDGLSEY 188 Query: 93 LSI-RTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 ++I R + +E +F++ KG +SRQ +I + G+ I H LRHS A+ Sbjct: 189 INIIRPQWMIQPTEQIFINAKGKGISRQYIDSMIKSRCKEMGILTPISAHTLRHSFATAI 248 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + G+D R+IQ+ LGH++I T YT N Sbjct: 249 LDTGVDLRIIQELLGHQDISTTQIYTHVN 277 >UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desulfovibrio RepID=Q311L4_DESDG Length = 332 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 71/161 (44%), Gaps = 3/161 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R+ L L + G R SE L + D + I + K PL + QAL+ W Sbjct: 161 RDLALAELLYGSGLRISEALALDLCHTDPSSGLIKVTG-KGSKERIVPLSDTSRQALQLW 219 Query: 93 LSIRTS--YPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 L +R + + VFL +G L+R+Q II AGL + PH LRHS Sbjct: 220 LDVRETLDVSGGAEQAVFLGARGGRLNRRQALRIIEDLCRAAGLPQAVSPHALRHSFATH 279 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 L G D R +Q+ LGH + T YT + ++DRA Sbjct: 280 LLEAGADMRSVQELLGHERLTTTQRYTHLTLRKIVEVYDRA 320 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 11 NFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +FL+ E++ LL + P N + L + G R SE+C L ++ + L+ + I Sbjct: 109 SFLSVEEVKQLLNSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQLETGILRI- 167 Query: 70 RLKKGFST-THPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 L KG P+ N+ V+ L +L+ IR + ++ F++ GN ++ + ++ Sbjct: 168 -LGKGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNRITARSIQLLLKQ 226 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 G +I PH LRH+ L G D R+IQ+ LGH NI+ T YT Sbjct: 227 KAMECGFQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTTEIYT 276 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 8/172 (4%) Query: 11 NFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 ++LT EIE L + + R+ C+ L + G R SE C LR++D+DL+ + + Sbjct: 112 DYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMTLTVE 171 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLSRQQFYHII 125 K G P K + L +L + S P E++F+S+KG+ ++R+ + ++ Sbjct: 172 G-KGGRQRLVPFGEKSLDILNRYL--KQSRPFILKSRNCEYLFVSKKGSYINRKSVWRLL 228 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + ++ PH LRHS L D + +Q+ LGH +I T YT Sbjct: 229 NHYIKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYT 280 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 5/169 (2%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLLNKEVQ 87 P A R++ L L + G R SEI L D+ L ++H KG PL K + Sbjct: 166 PLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDE--AWVHVTGKGRKQRQVPLTGKSAE 223 Query: 88 ALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSC 147 ALKN+L +R + ++ + +F R G LS++Q ++ G + PHM+RHS Sbjct: 224 ALKNYLPLRQTA--SDGKALFTGRNGTRLSQRQIQKRLAQWAAINGDGRHVSPHMMRHSY 281 Query: 148 GFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L D R +Q+ LGH ++ T YT + ++D A R + Sbjct: 282 AGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIARLYDEAHPRAK 330 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 8/196 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D K + L E+ +LL+ + + R+ + L + G R SE+ L + +++L Sbjct: 102 KYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLI 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH----AESEWVFLSRKGNPLSR 118 + + K PL + ++ L + I T P +E +FL+ G PLSR Sbjct: 162 MGFVRVFG-KGDKERIVPLGDAVIEYLTTY--IETIRPQLLKKTVTEVLFLNMHGKPLSR 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + +I +G A + + PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 219 QAIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTH 278 Query: 179 SNAGRFYGIWDRARGR 194 + + ++++ R Sbjct: 279 VSKSQIRKMYNQFHPR 294 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 2/184 (1%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 + T EIE ++ P R + + L + G R SE L ++ +DL+ + I Sbjct: 110 YCTRDEIEKIMAQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGMLRIWG- 168 Query: 72 KKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K P+ + ++ ++ ++ ++R Y + W+F++R G + +I + Sbjct: 169 KGNKERLVPMPKQTIKIVREYVDTVRPLYQKKPTSWLFITRLGKKTTTASIESMIKSVCI 228 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 AG+ I PH LRH+ + G D R +Q+ LGH +I T YT + R +D Sbjct: 229 QAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIYTHIDRSRLRTAYDE 288 Query: 191 ARGR 194 G+ Sbjct: 289 GLGK 292 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 5/177 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + D K + L+ EIE LL + + P ARN + + + G R +E+ L+IS++ L Sbjct: 105 RIDRKIPDVLSLQEIEDLLAVIDLSTPEGARNRAMIEVLYSSGLRVTELIELKISNLYLD 164 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES--EWVFLSRKGNPLSRQ 119 + I K P+ + + L +++ +IR++ P + ++VFL+R+G +SR Sbjct: 165 IGFLRIIG-KANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKISRV 223 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + II A + I PH RHS L G + + +Q+ LGH NI T Y Sbjct: 224 MVFMIIKEVALLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIY 280 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 3/188 (1%) Query: 11 NFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FL + EIE L++ + R+ + L + G R SE LR D+D ++IH Sbjct: 115 EFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILHIH 174 Query: 70 RLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 K P + + L +++ +R + ++ +F++++G L+ + ++++ + Sbjct: 175 G-KGDKERLVPFYDLAKELLVSYIKDVRDVWATSDETALFVNQRGKKLTTRGVQYLMNKA 233 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 L + +HPHM RHS L + G D R +Q+ LGH ++ T Y + R + Sbjct: 234 VEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHVSKERLKAAY 293 Query: 189 DRARGRQR 196 + A R + Sbjct: 294 EHAHPRAK 301 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 5/163 (3%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ + L + G R +E+C + +SDID K + + L KG P +AL+N Sbjct: 149 RDSAILELLYATGMRVAELCGIDLSDIDYDRKMVRV--LGKGNKERVVPFGESAHKALRN 206 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WL +R + + +F+ +G ++ +Q I+ + G+ + PH LRH+ L Sbjct: 207 WLDVRDEMTE-DPKALFVGVRGQRINARQVRRIVDRAAKVTGVD-HLSPHSLRHTAATHL 264 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 + G D R +Q+ LGH +++ T YT + R +++A R Sbjct: 265 LDGGADLRQVQELLGHSSMQTTQIYTHVSNKRLLEAFNKAHPR 307 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%) Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQAL 89 A R+ + L + G R +E+ +L+ +DID + + KG T P+ ++AL Sbjct: 151 ATRDLAIFELFYSSGLRLTELTQLQPTDIDFTGGTVRV--TGKGNKTRIVPVGELALRAL 208 Query: 90 KNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 + WL +R+++ +FLS++G + + + + L +HPH LRHS Sbjct: 209 QAWLPLRSAWLIPGETALFLSQRGRRIHPRTIAYRLHQRAQLQNLDSRVHPHTLRHSFAS 268 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L D R +Q+ LGH +IR T YT + I+D+A R R Sbjct: 269 HLLQSSGDLRAVQEMLGHSSIRSTQVYTHLDFQHLAKIYDQAHPRAR 315 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 6/196 (3%) Query: 5 ADNKKRNF---LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 A KKR L E+ LL+ P A R+ + L + G R +E+ + + D+ L Sbjct: 112 APRKKRPLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHL 171 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 ++ I + + KG P V+ + WL +R+ +F+S+ G +S + Sbjct: 172 RSGEIRV--IGKGNKERKVPFAGMAVEWVGKWLKVRSGLADPSEPALFVSKLGTRISHRS 229 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G ++ I PH LRHS + + R +Q+ LGH NI T YT + Sbjct: 230 VQKRMAEWGQKQAVASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLD 289 Query: 181 AGRFYGIWDRARGRQR 196 ++D+A R R Sbjct: 290 FQHLADVYDQAHPRAR 305 >UniRef50_A4FYH1 Phage integrase family protein n=1 Tax=Methanococcus maripaludis C5 RepID=A4FYH1_METM5 Length = 275 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K D K+R++LT + + LL++ Y T+ G R SE + + D+D Sbjct: 99 KPDKKERDYLTQKQSDDLLRSI----IDVNFYIFTMFFIKTGVRVSEFQNILLDDVDFNE 154 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQA-LKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQF 121 + I+I R KG + ++ LK WL R P A + +FL+R+G + + Sbjct: 155 QTIFI-RGGKGRKDRFVFFDLDMGINLKRWLRERDILKPKAPN--LFLNRRGKAIGKSSI 211 Query: 122 YHIISTSGGNAG--LSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 H I+ G ++ I PH+LRH+ + G+D R +QD LGH +I+ T Sbjct: 212 THYINYLNDVYGKKVNKRITPHILRHTFATTCVDKGMDLRTLQDILGHEDIKTT 265 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 9/170 (5%) Query: 17 EIESLLKAAN--TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKG 74 EI ++L+ A GP R+ L L + G R +E+ L D+ L + ++ KG Sbjct: 128 EIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDLYLAGEFPHVKLFGKG 187 Query: 75 FST-THPLLNKEVQALKNWLSIRTSYPHAESEW------VFLSRKGNPLSRQQFYHIIST 127 PL + VQAL+++L + +++ +FL+++G LSRQ + IIS Sbjct: 188 RKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKRGLSLSRQSAWEIISQ 247 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + AG E+ PH LRHS L G R +Q+ LGH ++ T YT Sbjct: 248 TAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYT 297 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 5/177 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K D K L+ E+ +L ++RN C+ L + G R SE+ L + D+++K Sbjct: 104 KRDKKLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNIK 163 Query: 63 AKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQ 120 +I + KG P+ + + L+ +++ R + +F ++ G LSR++ Sbjct: 164 MG--FIKVIGKGNKERMIPIGSYVGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREE 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 FY I+ T + ++ ++ PH RH+ L G D R IQ+ LGH +I T YT Sbjct: 222 FYSILQTIVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYT 278 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 15/208 (7%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + + FL EI LL +T P R+ L L + G R E+ L DID Sbjct: 145 KLERRLPVFLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVALNRGDIDYS 204 Query: 63 AKCIYIHRLKKGFST-THPLLNKEVQAL-----KNWLSIRTSYPHAES------EWVFLS 110 + + KG P+ ++ +QAL W +R P AE + +FL+ Sbjct: 205 EGWVIV--WGKGRKERAVPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPLFLN 262 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 + G LS + ++ LS +I PH +RH+ + N G D R +Q+ LGH ++ Sbjct: 263 KLGGRLSDRSVRRLLDRYVSQLALSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHASL 322 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQRHA 198 T YT R + RA RQR A Sbjct: 323 STTQIYTHVTTQRLRTEYLRAHPRQRRA 350 >UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales RepID=XERC_EUBR3 Length = 306 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Query: 30 HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH-------RLKKGFSTTHPLL 82 +A R+ + L F G R SE+C L+ISD++L I I+ L+ G S+ +L Sbjct: 138 NALRDAAIVELLFSTGIRISELCNLKISDVNLIDGVILIYGKGSKERILQIGNSSVLNIL 197 Query: 83 NKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHM 142 + N + + F S+ G PLS Q +I+ + + L I PHM Sbjct: 198 KEYKNDFYNEI--------VQCNHFFSSQSGKPLSDQSVRRMINKYASLSSIDLHITPHM 249 Query: 143 LRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RH+ +L +D R IQ+ LGH +I T YT Sbjct: 250 FRHTFATSLLEADVDIRYIQEMLGHSSINITQIYT 284 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 10/192 (5%) Query: 4 KADNKKRNFLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K +K +FL E++ L KA NT P R+ + L + G R E +L ++DIDL Sbjct: 126 KQASKLPSFLYEEEMDELFKAFEGNT-PLDKRDRAILELLYATGMRVGECSQLDVADIDL 184 Query: 62 KAKCIYIHRLKKGFSTTH-PLLNKEVQALKNWL-SIRTSY---PHAESEWVFLSRKGNPL 116 + ++ KG + P+ + AL ++ R + ++E++ +FL+ +G PL Sbjct: 185 RIGTAFVK--GKGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPL 242 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + +++ A + I PH LRHS L N G D R++Q+ LGH ++ T Y Sbjct: 243 TDRSIRRMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVY 302 Query: 177 TASNAGRFYGIW 188 T R ++ Sbjct: 303 THVTKDRLREVY 314 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 14/207 (6%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + D K +FL E+ LL+A P R+ + + G R SE+ + D+DL Sbjct: 104 RKDRKLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLD 163 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-----------SIRTSYPHA-ESEWVFLS 110 + I R K PL + ++A+K WL S R S A VF + Sbjct: 164 EGVVRI-RGKGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFTN 222 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 + G L+ + ++ GL L PH LRH+ L + G D R +Q+ LGH+++ Sbjct: 223 KFGKRLTTRSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKSL 282 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQRH 197 T YT + +++RA R R+ Sbjct: 283 VTTQIYTHVSTAALKAVYERAHPRARN 309 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 7/179 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K + L+ EIE +L A + + P RN + + G R SE+ L+IS++ Sbjct: 105 KLGRKLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFFD 164 Query: 63 AKCIYIHRLKKGFSTTHPLLNKE----VQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 ++ L KG + ++ + +N + +VFL+R+GN LSR Sbjct: 165 DG--FVKVLGKGNKERLVPIGRDARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSR 222 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + II GL + PH RHS L G D R +Q+ LGH +I T YT Sbjct: 223 VMVFTIIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYT 281 >UniRef50_A4FWI1 Tyrosine recombinase XerC subunit n=1 Tax=Methanococcus maripaludis C5 RepID=A4FWI1_METM5 Length = 291 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 20/181 (11%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH-GFRASEICRLRISDIDLKAKCI 66 K+R +LT + LL +N + Y L L+ F+H G R SE L+I D+D+ + I Sbjct: 110 KEREYLTKEQTNYLL--SNVFEYE---YRLFLMFFLHTGVRNSEFRNLKIHDVDMDERTI 164 Query: 67 YIHRLKKGFSTTHPLLNKEVQA-LKNWLSIRTS-YPHAESEWVFLSRKGNPLSRQQFYHI 124 I L KG + ++ E+ + LK WL R S +P +S+ F++R GNP+ + H+ Sbjct: 165 RI--LGKGRKERYVFIDNELYSYLKIWLIQRDSKFP--KSDHFFVNRLGNPI---RLTHL 217 Query: 125 ISTSG-----GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +S + + I PH+LRH+ +MG+D + + LGH +I+ T Y Sbjct: 218 VSFTDYLNEVSKNKIGFRITPHILRHTFATRCIDMGMDLKTLSLILGHEDIKTTSIYLHK 277 Query: 180 N 180 N Sbjct: 278 N 278 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 5/190 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + K I +LL A + P R+ + L + G R SE+ L +SDID Sbjct: 113 KKEQKAFKVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSELVGLNLSDIDFG 172 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA---ESEWVFLSRKGNPLSRQ 119 I + R K P+ + ++ + ++L ++ + ++E +F+++ G+ L+ + Sbjct: 173 GMRILV-RGKGKKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTDR 231 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 I+ AGL ++ PH RHS L G D R IQ LGH ++ T YT Sbjct: 232 SVRRIVEKYLKIAGLPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTHL 291 Query: 180 NAGRFYGIWD 189 N ++D Sbjct: 292 NLTELLRVYD 301 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 17/174 (9%) Query: 13 LTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 T E+ +LL +T P RN + + G R SE+ +R+ DIDLK + + Sbjct: 113 FTEEEVRTLLSIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLKRGLVRVTG- 171 Query: 72 KKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQQ-------FYH 123 K PL + ++A+ N+L +R + S + +FL++ G +Q ++ Sbjct: 172 KGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAFDTKQLDIILKRYFE 231 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +++ + G + PH LRHS L + G D R IQ+ LGH + T YT Sbjct: 232 LVAKAKGYS-------PHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYT 278 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 4/154 (2%) Query: 26 NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKE 85 + PH AR+ + + + G R E+C L + D+D + + + K T P+ Sbjct: 146 DESPHGARDAAILEVLYGGGLRVGELCGLDLGDVDRSRRTVKVTG-KGDKERTVPMGAPA 204 Query: 86 VQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHML 143 ++A+ WL R + PH+ + +FL +G + ++ ++ T S ++ PH L Sbjct: 205 LRAIDTWLPRREEWVGPHS-GQALFLGARGRRIDQRVVRRVVHTDLRAEPDSPDLGPHGL 263 Query: 144 RHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RH+ L G D R +QD LGH ++ T YT Sbjct: 264 RHAMATHLLEGGADLRTVQDILGHESLATTQIYT 297 >UniRef50_C1XXX1 Site-specific recombinase XerD n=2 Tax=Meiothermus RepID=C1XXX1_9DEIN Length = 251 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 9/171 (5%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTL-LCFIHGFRASEICRLRISD--IDLKAKCIYIH 69 L+ + LL+AA Y L L F G R SE LR D +D +A +Y+H Sbjct: 72 LSPEAVSRLLEAAYRLSPRKPVYGLMLKTLFYTGCRVSEFVFLRAQDAYLDGEAPHLYVH 131 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 R KKG P+L Q L+ L+ RT ++F S + S + +I + Sbjct: 132 RAKKGSVRYVPILPALAQELRVHLAGRTR------GYLFESNRHQRYSPRAIQKLIQQAA 185 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 AG+ ++PH+LRHS L + G+ +Q +LGH++ + T Y S+ Sbjct: 186 AEAGIEKRVYPHLLRHSVAQILLDRGMPLEQLQKFLGHQDPKTTQIYAESS 236 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 7/165 (4%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 LT + L+ AA T AARN CL L + G R +E+ L+ SD+D + I + + Sbjct: 136 LTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDLDETERWITV--MG 193 Query: 73 KGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 KG P AL W + P +E WVF + G L+ + + ++ + Sbjct: 194 KGSKERMVPYGQWAASALAEW---KAQCPPSEKGWVFPGKGGKSLTERTVHRLVEAASQL 250 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 AG + PH LRH + G + +Q+ LGH ++ T Y Sbjct: 251 AG-TPGASPHTLRHCFATHMLEGGASVKAVQELLGHESLLTTQRY 294 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 4/170 (2%) Query: 11 NFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 L+ E++ + + + + P RN + + F G R SE+ L++S++ L I + Sbjct: 115 EVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYLDEGFIRVT 174 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRT--SYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 K P+ K ++ L W R E ++VFL+R+G L+R ++ Sbjct: 175 G-KGNKERLVPISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRTMILIMLKR 233 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AG+ I PH LRHS L G D R IQ LGH +I T YT Sbjct: 234 QAQEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYT 283 >UniRef50_UPI0001C42AAB hypothetical protein BpOF4_04550 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42AAB Length = 348 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 10/176 (5%) Query: 7 NKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 K+ + LT E+++L+ +A R+Y + R +E+C LR DID K Sbjct: 146 EKEIDVLTVDELKALMSVPYHRKYADFRDYVIMTFLLDTMCRINEVCTLRKRDIDFKDNT 205 Query: 66 IYIH----RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++I + +KG P + + LK + + +SE++FLS G L F Sbjct: 206 VHIRAEITKTRKGRHV--PFQKRTARLLKELIKEVDVF---DSEYIFLSNYGEQLEPNHF 260 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + AG+ +HPH+ RH+ G D R +Q LGH ++R T YT Sbjct: 261 RSRLKGFAKKAGIERNVHPHLFRHTGATMFLEAGGDIRHLQLILGHADLRMTTRYT 316 >UniRef50_Q8A4G5 Putative integrase/recombinase n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A4G5_BACTN Length = 330 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 14/176 (7%) Query: 11 NFLTHSEIESLLKAANTGPHAAR-NYCLTLLCFIHGFRASEICRLRISDIDLK-AKCIYI 68 ++L E+++LL + R +Y + L + G RASE L I I A C + Sbjct: 136 SYLDKREMDALLNTPDRQTVQGRKDYAMLLFLYNTGVRASEAASLTIGSIIYDDASCPLV 195 Query: 69 HRLKKG-FSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHII-- 125 KG S T PL N+ + A+K +++ R E+E VFL+R GNP++R Y ++ Sbjct: 196 RIYGKGNKSRTCPLWNRTLNAIKPFMAGR-----RETERVFLNRYGNPMTRFGIYELLER 250 Query: 126 ----STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +T+ + PH LRH+ L G D IQ +LGH ++ T YT Sbjct: 251 NVIKATATAPTLAKKRVSPHTLRHTAACHLYESGNDIVTIQSWLGHVSLNTTNIYT 306 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI--- 68 L+ +++E+LL A G R+ + L + G R SE+ L+ ++ L + + Sbjct: 157 LSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGLNDGVVRVMGK 216 Query: 69 ---HRLKKGFSTTHPLLNKEV-QALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHI 124 RL H + + + +A L RTS + +F++ +G ++RQQF++I Sbjct: 217 GSKERLVPFGEVAHGWIERYLREARPALLGARTS------DALFVTARGEGMTRQQFWNI 270 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 I A + + PH LRH+ L N G D R++Q LGH +I T YT Sbjct: 271 IKRHAMRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYT 323 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 1/179 (0%) Query: 18 IESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST 77 I LL P R+ + L + G R E+ L DI L + + + K G Sbjct: 138 ISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLGLQEVKVLG-KGGKER 196 Query: 78 THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLE 137 P+ ++AL W + R A+ +F+S +G LS + ++ G N LS+ Sbjct: 197 RVPVGKLAMEALALWHTQRLLLVQADEPALFVSNQGKRLSHRSIQARMAKWGQNQALSVP 256 Query: 138 IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 +HPH LRHS + D R +Q+ LGH N+ T YT+ + ++D A R + Sbjct: 257 VHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTSLDFQHLAKVYDGAHPRAK 315 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ + L + G R +E+ L I DID + + I KG T P K +L Sbjct: 145 RDKAILELLYSSGLRLAELQGLMIKDIDFNRQLLRI--TGKGNKTRIVPFGQKAKDSLIE 202 Query: 92 WLSIRTSYPHAESEW-----VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHS 146 WL I Y + E+ VF+S++GN L+ +Q + + AG+++++HPH+LRH Sbjct: 203 WLKI---YRIWQGEFNLDSAVFISQRGNRLTPRQIENRVKLQAQRAGVNVDLHPHLLRHC 259 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 + + D R +Q+ LGH N+ T YT + + ++D+ R Sbjct: 260 FASHMLSASGDLRSVQEMLGHSNLSTTQIYTHVDFDQLARVYDQTHPR 307 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K ++ + L+ SE+ LL GP R+ L + G RASE+ L + D+ Sbjct: 112 KVPDRLPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDV-FF 170 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS---IRTSYPHAESEWVFLSRKGNPLSRQ 119 A+ I K P+ + L ++L + + P V L+ +G LSRQ Sbjct: 171 AEGILRVMGKGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSRQ 230 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ T+G G ++HPH LRHS + G D R IQ+ LGH +I T Y Sbjct: 231 ALHTIVRTAGATIGRP-DLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYV 287 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 10/171 (5%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 LT +E++ LL N R+ + L + G R SEIC L+I DI + K Y+ Sbjct: 104 LTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGK--YLKIC 161 Query: 72 KKGF-STTHPLLNKEVQALKNWLSIRTS----YPHAESEWVFLSRKGNPLSRQQFYHIIS 126 KG P+ ++ + L+ + I+TS ++ +FL+ +G+ +SR + I+ Sbjct: 162 GKGKRERIVPINDRALDILQRY--IQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIVK 219 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + + I+PH LRHS L G D R +Q LGH +I T YT Sbjct: 220 EAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYT 270 >UniRef50_B1HMM0 Tyrosine recombinase xerC n=2 Tax=Bacillaceae RepID=B1HMM0_LYSSC Length = 320 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 7/177 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K K+ ++ E + + RNYC+ + G R +E+C+L I+ I + Sbjct: 126 KIGRKRPIYMNFREATQFIDGIPVNQASPRNYCMMMFFLNLGIRVTELCQLNITSIQGR- 184 Query: 64 KCIYIHRLKKGFSTTHPLLNKE-VQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++ + KG LN +QAL ++ S +T Y E +F+S+KG +RQ Sbjct: 185 ---HLTVVGKGNKERTVYLNDSCMQALADYENSGKTPYKGNGDEPLFVSQKGTRFTRQTV 241 Query: 122 YHIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 I+ +GL E + PH LRH+ + G D R +Q LGH ++ T YT Sbjct: 242 AKIVKRINQQSGLQKERLTPHKLRHTSATMMYKAGADIRSLQHILGHSSVATTQIYT 298 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 13/177 (7%) Query: 13 LTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI------DLKAK 64 LT S+I S++ A P AR+ + L + G R SE+ + ++D+ D K Sbjct: 114 LTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDLSSIDTSDGKVT 173 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEW---VFLSRKGNPLSRQQ 120 + + R K PL + +A++N+L +R S+ +FL+ +G+ +SRQ Sbjct: 174 TLKL-RGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRISRQS 232 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + ++ + AG++ + PH+ RHS L N G D R++Q+ LGH ++ T YT Sbjct: 233 AWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQIYT 289 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 6/188 (3%) Query: 11 NFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FLT EIE LL+A P R+ + L + G R SE+ L++ + I Sbjct: 117 QFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLES--YYPEHFQIK 174 Query: 70 RLKKGFST-THPLLNKEVQALKNWLSI-RTSYPHAESE-WVFLSRKGNPLSRQQFYHIIS 126 L KG P+ +AL +++ RT ++ VFL+++G PL+R + +I Sbjct: 175 VLGKGNKERAVPIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLII 234 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 G+ +++PH+LRH+ L G D R+IQ+ LGH NI T YT N Sbjct: 235 HYARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHVNLKHLKE 294 Query: 187 IWDRARGR 194 I R R Sbjct: 295 IHRRCHPR 302 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 3/165 (1%) Query: 32 ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKN 91 AR+ + L + G R SE L + D+D + I R K G P+ + + L+ Sbjct: 127 ARDRAIFELVYSCGLRLSETVALNLDDVDFSDSLLRI-RGKGGKERLVPIGAEAMLRLRT 185 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WL R++ + +FL R G+ L +Q + G +HPHMLRHS + Sbjct: 186 WLGERSA--GMDEPALFLGRHGHRLGGRQVEKRLRDWAIKTGAGQHVHPHMLRHSFASHM 243 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 D R +Q+ LGH N+ T YTA + ++D A R R Sbjct: 244 LQSSGDLRAVQELLGHANLSSTQIYTALDFQHLAKVYDGAHPRAR 288 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 3/163 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ L + + G R SE L + DIDL + + + L KG PL L Sbjct: 132 RDLALLAVMYGAGLRVSEAVGLDLHDIDLHSCELRV--LGKGSKQRIVPLPTTAADLLGQ 189 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 WL R + VFL+R G L+ + ++ T +G + + PH LRHS L Sbjct: 190 WLDERLLGLVRDERAVFLNRFGQRLTARSVQRMLKTRALESGADISVTPHRLRHSFATHL 249 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 G+D R IQ+ LGH ++ T YT + + ++DR+ R Sbjct: 250 LAGGVDLRAIQELLGHASLATTERYTHLDIAKLTEVYDRSHPR 292 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 6/176 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K D K +FLT +E++ LL + P R+ + L + G R E+ L + +ID + Sbjct: 124 KKDKKVPSFLTENEMQMLLNLPDLKP---RDRAMIELFYSCGLRIEELVSLDLKNIDFIS 180 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQF 121 + + K+ P+ + + A+K++++ R + P+ VFLS + L ++ Sbjct: 181 NVVTVTG-KRNKERIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTA 239 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 I+ AG + ++ PH LRH+ + + G D R +Q+ LGH+N+ T YT Sbjct: 240 RRILHRYFVKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYT 295 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 5/169 (2%) Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQ-AL 89 AAR+ + + + G R SE L + DIDL + KG +L + Q AL Sbjct: 148 AARDLAMVEVIYSGGLRISETTGLDMGDIDLIGGIARVR--GKGKKERIAVLGRPSQKAL 205 Query: 90 KNWLSIRTSYP--HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSC 147 +N+ +R++ A VFL++ G L+ + F + A L ++ PH LRHS Sbjct: 206 RNYFKLRSTVGGGRAPGSPVFLNKFGKRLTPRSFQRNLKNYLIAANLPPDLTPHKLRHSF 265 Query: 148 GFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L + G D R +Q+ LGH N+ T YT +A R ++ A R + Sbjct: 266 ATHLLDAGADLRSVQEMLGHENLSTTQIYTHVSAERMKEVYKEAHPRAK 314 >UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadaceae RepID=Q0C629_HYPNA Length = 309 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 17/181 (9%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA-----KC 65 + L+ E+ L++A + R CL L + G RA+E+ LR+ ++ + Sbjct: 107 DVLSREEVGRLIEACG---NDKRLKCLVELLYGAGLRATELVTLRVGNLPRRKAGQWMSA 163 Query: 66 IYIHRLKKGFSTTHPLLNKEVQALKNWLSIR-TSYPH------AESEWVFLSR-KGNPLS 117 I R K G PL + AL WL +R S P + +VF SR K L+ Sbjct: 164 DIIIRGKGGKDRLCPLGRAALIALSEWLEVREASLPDNPLMRSKQEGFVFPSRGKEGHLT 223 Query: 118 RQQFYHIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 R++ ++ G AGL E ++PH LRH+ L G D R++Q LGH +I T Y Sbjct: 224 RRRLGQMLEDLAGEAGLRSERVYPHALRHAYATHLLQGGADLRVVQTLLGHADIATTQIY 283 Query: 177 T 177 T Sbjct: 284 T 284 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 19/181 (10%) Query: 33 RNYCLTLLCFIHGFRASEICRLRI-----------SDIDLKAKCIYIHRLKKGFST-THP 80 R+ + L + G R SE+ L + S +DL+A+ + + L KG T P Sbjct: 148 RDRAVNELFYSCGLRLSELVSLDMRHVKAGAYESASWLDLEAREVQV--LGKGSKRRTVP 205 Query: 81 LLNKEVQALKNWLSIRTSYPHAESE-----WVFLSRKGNPLSRQQFYHIISTSGGNAGLS 135 + K +AL WL++R +++ +FLS +G L+++Q + + AG+ Sbjct: 206 VGTKATEALAAWLAVRAQLAKSDAAPEDAHALFLSPRGKRLAQRQIQLRMKRNAIAAGVP 265 Query: 136 LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 ++HPH+LRHS + D R +Q+ LGH +I T YT+ + I+D+A R Sbjct: 266 ADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIASTQVYTSLDFQHLAKIYDQAHPRA 325 Query: 196 R 196 + Sbjct: 326 K 326 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 10/184 (5%) Query: 11 NFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + LT E+ LL + P RN + L + G R SE+ + + D++L + I +H Sbjct: 127 DVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLNLTERVILVH 186 Query: 70 RLKKGFSTTH-PLLNKEVQALKNWLSIRTSYP----HAESEWVFLSRKGNPLSRQQFYHI 124 KG + P ++ + +L + S P +SE +FL+ +G +SR F+ I Sbjct: 187 --GKGSKQRYVPYVDTLDELFAKYL--KQSRPILLKLKQSELLFLNNRGERMSRMGFWKI 242 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 + + A + E+ PH RHS L G++ R++Q LGH +I T YT + R Sbjct: 243 LRKAVLEANIKKEVTPHTFRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKRL 302 Query: 185 YGIW 188 + Sbjct: 303 VETY 306 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 15/201 (7%) Query: 4 KADNKKRNFLTHSEIESLL-----KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 +AD + L S+ LL +AA G RN+ + L + G R SE+C L IS Sbjct: 107 RADQLLPSPLDESDARVLLNTARDEAAAGGASQIRNWAILELTYACGLRVSEVCALDISS 166 Query: 59 IDLKAKCIYIHRLKKGFST-THPLLNKEVQALKNWLSIRTSYPHAESE----WVFLSRKG 113 ++ A + + + KG P AL +WL +R P E +FL KG Sbjct: 167 LNRDALTVRV--VGKGNKERVVPYGPPAADALDHWL-VR-GRPQLAGERSGNALFLGDKG 222 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 + + ++ + AG+ +I PH LRHS L G D R +Q+ LGH ++ T Sbjct: 223 GRIDPRIVRSMVHKTAARAGVH-DIAPHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTT 281 Query: 174 VWYTASNAGRFYGIWDRARGR 194 YT + R I+ RA R Sbjct: 282 QRYTHVDTARLSAIYQRAHPR 302 >UniRef50_Q49HK5 Putative integrase/recombinase n=1 Tax=uncultured bacterial symbiont of Discodermia dissoluta RepID=Q49HK5_9BACT Length = 410 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 6/148 (4%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R+Y + LL +G R+SEI L + DI ++ + R K T PL ++ AL ++ Sbjct: 242 RDYAMFLLIATYGLRSSEIAALLLDDISWRSAQFRVQRPKVLAPITLPLTDEAGAALADY 301 Query: 93 LSIRTSYPHAESEWVFLS--RKGNPLSRQQFYHIISTSGGNAGLSLE--IHPHMLRHSCG 148 L R + P + VFL+ + PLS + + S LS+E + PH+LRHS Sbjct: 302 L--RHARPQSTHRAVFLTLRQPTRPLSTRGIQSVFSRRIAAGDLSIEGKVGPHILRHSLA 359 Query: 149 FALANMGIDTRLIQDYLGHRNIRHTVWY 176 L ++I D LGHR++ T Y Sbjct: 360 LHLLRQHTSVKVIGDLLGHRSVASTGGY 387 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 15/187 (8%) Query: 13 LTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 L + +LL++ + P R+ L + + G R SEI ++ D + + Sbjct: 110 LDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEAFVRV-- 167 Query: 71 LKKGFST-THPLLNKEVQALKNWLS------IRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 L KG T P+ + AL+ +L +RT +FL+ +G PL+R++ Sbjct: 168 LGKGNKTRLVPVGRSALDALQMYLEKGRPKLVRT----GTKSHIFLTVRGRPLTRERIRQ 223 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I+ AGL + PH+LRHS L G D R+IQ+ LGH +I T YT R Sbjct: 224 ILRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHLEQQR 283 Query: 184 FYGIWDR 190 I R Sbjct: 284 LNSIHHR 290 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 16/194 (8%) Query: 12 FLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 L+ E+ SLL+ G AAR+ + L + G R SE+ L ++ +DL + + Sbjct: 142 VLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDLADGMVRV-- 199 Query: 71 LKKGFST-THPLLNKEVQALKNWLSIR------TSYPHAE------SEWVFLSRKGNPLS 117 + KG P+ V A++ +L R T+ E ++ + ++ +G L+ Sbjct: 200 VGKGNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGRLT 259 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + ++ AG++ + PH LRHS L MG D R++Q+ LGH ++ T YT Sbjct: 260 SRSIERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLSTTQRYT 319 Query: 178 ASNAGRFYGIWDRA 191 N ++D+A Sbjct: 320 HLNLDHLTAVYDQA 333 >UniRef50_Q2ESR3 Integrase/recombinase n=5 Tax=Bacillus thuringiensis RepID=Q2ESR3_BACTU Length = 314 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 7/166 (4%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 RN + + G R SE+ +L++ DI+ I + K G + P+ + V ++ W Sbjct: 149 RNLAIVNIMLQAGLRVSEVSKLKLDDIE--DGFISVRDGKGGKARKIPMNSDVVNSINKW 206 Query: 93 LS---IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 I ++ ++E++F+S+K PLS +I T + GL E+ PH+LRH+ G Sbjct: 207 KEHRQIHQAFKENQTEYLFVSQKNGPLSVVGIENIFKTIRKHTGLE-ELTPHVLRHTFGH 265 Query: 150 ALANMGIDTRLIQDYLGHRNIRHT-VWYTASNAGRFYGIWDRARGR 194 L GI + + +GH +I T ++ TA + + A G+ Sbjct: 266 DLVQKGIPISYVAELMGHTDINTTKIYVTAGQQEKQEAVEKLASGK 311 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 24 AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTH-PLL 82 AA+T R+ + L + G R SE+C L + D+D + + + L KG P Sbjct: 142 AADTEDEFRRDSAILELLYATGMRVSELCGLDLGDVDHHRRMVRV--LGKGDKERMIPFG 199 Query: 83 NKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHM 142 AL+ WL R E + +F+ +G + +Q I+ + AG + PH Sbjct: 200 KAAADALEQWLEARDRMAKVE-DAMFVGVRGGRIDARQIRRIVDRTAQVAGAD-HLSPHS 257 Query: 143 LRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 LRH+ L + G D R +Q+ LGH +++ T YT ++ R Sbjct: 258 LRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTHVSSQRL 299 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 8/175 (4%) Query: 17 EIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFS 76 E E + + N + R+ + LL F G R SE+ LR+SD+DL+ + + + KG Sbjct: 115 EAEEVFRMVNAAENL-RDKLIVLLLFTTGLRVSELVSLRVSDVDLEKRTLRVR--GKGSK 171 Query: 77 TTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSL 136 V L +R+ SEW+F S + ++ AG+ Sbjct: 172 ERLVYFPDYVADL-----LRSYMKGLNSEWLFPSETAEHIHYTTVERVLKRLKEKAGIEK 226 Query: 137 EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 ++ PH LRHS G+D R IQ+ LGH N+ T Y + R ++R Sbjct: 227 KVTPHTLRHSFATLSLAAGLDIREIQELLGHSNLNTTQVYAHVSRERLKRDYERV 281 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 5/178 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA NK L+ E+ L+ A P R+ L + G R SE C L +S + L Sbjct: 108 KAVNKLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCRVSEACDLELSSLHLD 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW---VFLSRKGNPLSRQ 119 + + K PL + + AL WL A + VF++++G+ LSRQ Sbjct: 168 QGLVVLTG-KGSKQRMVPLGDCALVALLAWLEEGRPELVARAPREAHVFVNKRGSRLSRQ 226 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + +AG++ +I PH LRHS L G D R +Q LGH +I T YT Sbjct: 227 GCFFRLRQHAVSAGITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYT 284 >UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae RepID=XERC_THEAB Length = 283 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHR 70 +FLT E+ SL+ A N + ++LL + G R SE+C LR +DI + + Sbjct: 110 DFLTEDEVSSLIGAFNEENELRQKTAISLLYYA-GLRISELCNLRTTDISFIPPFLRVEM 168 Query: 71 LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNP-LSRQQFYHIISTSG 129 K PL +K + LK ++ + E+ +F+ G + + + Sbjct: 169 GKGRKDRLVPLPDKVIPILKKYIDL-------ENPKIFVFENGKKHVHPSTVFRWLKEGV 221 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 A + ++HPH LRHS L G++ +++Q+ LGH N+ T Y Sbjct: 222 KRANIKKDVHPHTLRHSYATHLIRKGVNIKVVQELLGHTNLSTTSIY 268 >UniRef50_Q1GW11 Phage integrase n=5 Tax=Alphaproteobacteria RepID=Q1GW11_SPHAL Length = 334 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D ++L +EI++LL + R+ + L + G R SE+ L++ D Sbjct: 114 KKTDKALIDYLDRAEIKALLDTPDPRTRLGTRDRAMLHLTYAGGLRVSELVTLQLGDFPD 173 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQ-ALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 ++ +H + KG L KE Q AL+ WL+IR P E +FL+ G P++R Sbjct: 174 RSLST-MHIMGKGRRERVLPLWKETQIALRAWLAIR---PQVEVTEIFLNANGQPMTRDG 229 Query: 121 FY-----HIISTSGGNAG-LSLEIHPHMLRHSCGF-ALANMGIDTRLIQDYLGHRNIRHT 173 F H+ + + L + PH+LRHSC LA G D R + +LGH +I+ T Sbjct: 230 FAFRLAEHVKTAATKQPSILGKRVTPHVLRHSCAMHTLAATG-DIRKVALWLGHASIQST 288 Query: 174 VWYTASN 180 Y ++ Sbjct: 289 ETYLRAD 295 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 5/185 (2%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLK 72 LT +E LK R+ + + + G R SE+ L +S ++ L Sbjct: 134 LTRQLLEQPLKTWQD----VRDQAIFEILYSGGLRVSELVELDLSPGLDGLASGWVRVLG 189 Query: 73 KGFSTTHPLLNKEVQ-ALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 KG + + Q AL WL IR+ Y + VF++R G L + + Sbjct: 190 KGQKERDAPVGQPAQKALHRWLEIRSDYAQPGEQAVFVNRFGKRLGVRSIQTQLDKRTLQ 249 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 AGL ++ PH LRH+C + D R +Q+ LGH N+ T YT + ++D+A Sbjct: 250 AGLPTKMSPHRLRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLDLQHLATVYDKA 309 Query: 192 RGRQR 196 R + Sbjct: 310 HPRAK 314 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 12/172 (6%) Query: 13 LTHSEIESLL-KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ +EI++L+ K T P R+ + L + G R SE+ LR+ + L + + Sbjct: 109 LSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAMNLLQV--- 165 Query: 72 KKGFSTTHPLLNKEVQALKNWLS--IRTSYP----HAESEWVFLSRKGNPLSRQQFYHII 125 G L+ QA +W++ ++ S P H + + VF++ G+ L+RQ + + Sbjct: 166 -TGKGDKERLVPISPQA-ADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQVIWKNL 223 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + G+ ++ PH LRHS L G D R++Q+ LGH +I T YT Sbjct: 224 KAYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYT 275 >UniRef50_C3R440 Phage integrase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R440_9BACE Length = 407 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%) Query: 11 NFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 +FL +++ LL+ TG A+R+Y + +L ++G R SE+ L++SDID + + IYI Sbjct: 212 SFLPWDKVQKLLQTVKEQTGKSASRDYAIFMLLAMYGLRCSEVANLKLSDIDWRKEQIYI 271 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKG--NPLSRQQFYHII 125 R K PLL+ +A+ ++L + P+ +S+ +F P+S ++ Sbjct: 272 KRAKNCRPQILPLLHNVGEAIIDYL--KNGRPNEVDSDSLFFCAPAPIRPISCNAIASVV 329 Query: 126 STSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +G++++ PH LRHS L N G + + D LGH+++ T Y Sbjct: 330 YRYLKYSGINIKHKGPHSLRHSHATFLINEGQTLKDVGDLLGHKSMEATRVYA 382 >UniRef50_Q65KI2 Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KI2_BACLD Length = 352 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 9/172 (5%) Query: 11 NFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGF-RASEICRLRISDIDLKAKCIYIH 69 L+ E++ LLK N + + ++C I+ R EI L I +I+ + I + Sbjct: 149 QILSVEEMKQLLKTPNKRKFSEFRDYVVMMCLINSMCRIGEIVTLEIENINFELSYIILE 208 Query: 70 ----RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHII 125 + +KG PL +Q LK L T + S++VF++ +G L+ F + Sbjct: 209 AQKTKTRKGRMI--PLDKNTMQLLKKLLLRNTRF--KPSKYVFITEEGTRLTTDNFRKRL 264 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + AG++ +HPH+ RH+ G D R +Q +GH+++R + YT Sbjct: 265 ADYAHQAGINKRVHPHLFRHTAASMFLQAGGDLRHLQTIIGHKDLRMVLRYT 316 >UniRef50_C5V4M0 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4M0_9PROT Length = 298 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 13/146 (8%) Query: 38 TLLCFIHGFRASEICRLRISDIDLKAKCIYIH------RLKKGFSTTHPLLNKEVQALKN 91 T L G R E+ ++ I D+ L + I RL F P LN QA+ Sbjct: 143 TKLLLTTGIRVGELVKIDIEDLVLPDCSLKIQGKGNRQRLVYLF---EPKLN---QAIAR 196 Query: 92 WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFAL 151 +L+IR + E++ +F++ G P + Q+ ++ AG+ I PHMLRH+ L Sbjct: 197 YLTIRLTRA-TETKKLFITEAGIPFTTQKTRILLGDLASKAGIERRITPHMLRHTTATQL 255 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYT 177 G+D R +Q LGH++I T YT Sbjct: 256 LEAGLDIRYVQKLLGHQSISTTEIYT 281 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 3/180 (1%) Query: 18 IESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST 77 IE+ P AR+ + L + G R SE+ L ++D+D A + + K G Sbjct: 132 IEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVADLDRAAGMVRVQG-KGGKER 190 Query: 78 THPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLE 137 P+ + ++AL+ +L+ R A+ +FL +G ++R+ ++ Sbjct: 191 IVPVGSAALEALEQYLAGRGQL--ADDAPLFLGCRGARINRRTVAQLVKRWASGIPAFRS 248 Query: 138 IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRH 197 I PH LRH+ + G D R IQ+ LGH ++ T YT R ++D+A R R Sbjct: 249 ISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYTHVGLDRLLEVYDKAHPRARE 308 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 9/161 (5%) Query: 24 AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLL 82 AA P R+ L + G R SE C + + DIDL K + + KG P+ Sbjct: 141 AAADDPVMLRDKALLEFMYATGSRVSEACGVDLDDIDLDDKVARL--MGKGSKQRLVPVG 198 Query: 83 NKEVQALKNWLSI------RTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSL 136 + +AL+ +L S AE VFL+++G LSRQ + II T+G A ++ Sbjct: 199 SFACEALRRYLRFGRPVLQSKSKGAAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHITK 258 Query: 137 EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +HPH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 259 PLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQIYT 299 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 13/173 (7%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R+ + L + G R SE+ + D+D I I R K P+ +A++ + Sbjct: 139 RDRAILELFYSSGIRVSELTGINEEDMDFSQGLIRI-RGKGKKERIVPIGQPASEAVQRY 197 Query: 93 LSIRTSYPHAESEW---------VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHML 143 + + P +E+ +F++R+ LS + I+S +GL +I PH L Sbjct: 198 MMKK---PGSETSGKAVATCPVPLFVNRRQGRLSARSVARILSKYVSMSGLQKQISPHTL 254 Query: 144 RHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 RHS L + G D R IQ+ LGH ++ T YTA + R ++DRA + R Sbjct: 255 RHSFATHLMDAGADLRSIQELLGHESLSTTQKYTAVSVNRLMAVYDRAHPKAR 307 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 6/186 (3%) Query: 13 LTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L +E+E LL T P R+ + L + G R SE+ L+ +D+ L +I Sbjct: 112 LALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIELKTADVHLSMG--FIRCF 169 Query: 72 KKGFST-THPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 KG P+ A++ +++ + S+ +FL+ G +SRQ F+ + Sbjct: 170 GKGRKERIVPIGEAAASAIEEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNLKKI 229 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 AG+ E+ PH LRHS L G D R +Q+ LGH +I T YT R ++ Sbjct: 230 ALEAGIKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVY 289 Query: 189 DRARGR 194 + R Sbjct: 290 KQFHPR 295 >UniRef50_A6LE90 Tyrosine type site-specific recombinase n=8 Tax=Bacteroidales RepID=A6LE90_PARD8 Length = 302 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 11/172 (6%) Query: 12 FLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 F+ SE+E+LL + RN + + + G R SE+ +R D+D +A + + Sbjct: 110 FIKDSELEALLDGDGFDEDFEGVRNRLVIEMLYDTGMRRSELIGIRNVDVDYEAMQVKVT 169 Query: 70 RLKKGFSTTHPLLNKEVQALKN----WLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHII 125 K+ P + LKN + +R A EW F+ + GN LS Y+I+ Sbjct: 170 G-KRNKQRLIPF----AEGLKNLMLAYTEVRDREVEAAGEWFFVRKNGNQLSTGIVYNIV 224 Query: 126 STSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + + PH+LRHS ++ N G + ++D LGH ++ T YT Sbjct: 225 KKQLSEIPMLAKRSPHVLRHSFATSMLNNGAELNAVKDLLGHSSLASTSVYT 276 >UniRef50_Q0W2T4 Integrase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2T4_UNCMA Length = 308 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 13/184 (7%) Query: 13 LTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH--- 69 LT E +L+++AN+ R+ + L G RA EI + DIDLK + YI Sbjct: 128 LTLLECRALMQSANS----IRDRAIISLMLCTGARAKEIVAANVDDIDLKQRFFYIRAHS 183 Query: 70 --RLKKGFSTTHPLLNKEV-QALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 + K + +L K+ + ++ WL IR P + + +FL+ L++ + I+ Sbjct: 184 PDEIVKNYREHKAILTKDAARYIQEWLDIR---PEVDEKALFLNTWAERLTKSGLHKIVV 240 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 ++ AG+ + H+LR +C + GI + L HR+I T+ Y S+ Sbjct: 241 STAKRAGIEKRCYSHLLRAACATNMLRSGISLNDVAAQLNHRSILSTMVYLTSDTETLRD 300 Query: 187 IWDR 190 D+ Sbjct: 301 SIDK 304 >UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae RepID=XERD_RICBR Length = 305 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 15/188 (7%) Query: 4 KADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI-- 59 K NK L+ +I+SLL+ + + P AR + L + G R SE+ L++SDI Sbjct: 100 KYQNKLPEILSIDDIKSLLEYCSQDISPEGARLNAMIHLLYASGLRVSELVSLKLSDILS 159 Query: 60 ---DLKAKCIYIHRLKKGFSTTHPLLNKE-VQALKNWLSIRTSYPHA--ESEWVFL---S 110 + K I+ L KG ++N+ + +L +L +R ++ + ++L S Sbjct: 160 NKVSREVKKIF-SVLGKGNKERIIVINEPAINSLVKYLVVRDNFVNKTKPKNLIYLFPSS 218 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 ++RQ F ++ ++ AGL+ E I PH+LRHS L G D R+IQ+ LGH + Sbjct: 219 AAAGYMTRQNFAILLKSAALYAGLNPEHISPHVLRHSFASHLLEGGADLRVIQELLGHAD 278 Query: 170 IRHTVWYT 177 I T YT Sbjct: 279 ISTTQIYT 286 >UniRef50_Q989Z0 Integrase/recombinase n=3 Tax=Proteobacteria RepID=Q989Z0_RHILO Length = 342 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 7/177 (3%) Query: 11 NFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +L +E+E+LL + P R+Y + L F G R E+ LR+ D+ L+ Sbjct: 128 EYLETTEVEALLAGIDRKTPAGRRDYAMFSLMFNTGARVQEVIDLRVRDVRLEPPHQVRF 187 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS--- 126 K P+ + Q LK + +T+ + +FL+ +G P++R +++ Sbjct: 188 TGKGNKIRLCPIWPRTAQLLKELIQKQTNDEDPADQHIFLNGRGAPMTRFGVRYLLQKRV 247 Query: 127 TSGGNAGLSLE---IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +G +L IHPH LRH+ L G+D I +LGH ++ T+ Y ++ Sbjct: 248 AAGAEVAPTLSDKRIHPHSLRHTTAIHLLKAGVDFVTISQWLGHASLNTTMRYARAD 304 >UniRef50_D1Y3S4 Tyrosine recombinase XerD n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S4_9BACT Length = 297 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 8/193 (4%) Query: 7 NKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 K LT EI+ +L A + G + R+ G RASE+C L++ ++L K Sbjct: 107 KKLPKILTEGEIQRILNACDGPGYYDCRDRTALETLANCGVRASELCGLKVGSLNLDDKN 166 Query: 66 IYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAES--EWVFLSRKGNPLSRQQFY 122 + + KG P + + +L R + + + +FLS + PLSR + Sbjct: 167 LIV--FGKGSKERQIPFAEDLKRQFQIYLQKRLEFLDGDETEKMLFLSSRREPLSRVDLW 224 Query: 123 HIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 I+ G A + E + PH+LRHS L G+D R +Q++LGH +I T Y + Sbjct: 225 RIVQKRGKMASVPEERLFPHVLRHSIATHLLRRGMDLRTLQEFLGHSSIATTEKYLHFDL 284 Query: 182 GRFYGIWDRARGR 194 ++DRA R Sbjct: 285 -ELRDVYDRAHPR 296 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 12/174 (6%) Query: 11 NFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + L+ ++ +LL GP RN C L + G RASE+ L D L + I Sbjct: 125 DVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGILRI- 183 Query: 70 RLKKGF-STTHPLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 + KG P+ + L ++L +R+ P + V L+ +G LSRQ + Sbjct: 184 -VGKGSRERIVPIGGSAARCLASYLEDARPLLRS--PRRLTPAVMLNARGGRLSRQSIHS 240 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 I+ +G G+ ++HPH LRHS L G D R IQ+ LGH +I T YT Sbjct: 241 IVREAGHVIGIK-DLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYT 293 >UniRef50_B9K3U6 Integrase/recombinase n=5 Tax=Proteobacteria RepID=B9K3U6_AGRVS Length = 335 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 10/178 (5%) Query: 6 DNKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 D+K LT E+ ++L A + R+ + LCF G R SE+ L + ++ L+ Sbjct: 117 DHKLIRHLTMDEVRAVLDAPDIKTRLGLRDRAMLHLCFAGGLRVSELVGLTLENVTLQPS 176 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHI 124 + K + PL + + ++ WL++R P E +F++ +G ++R F +I Sbjct: 177 PSILVFGKGRRERSLPLWKETARDVRAWLAVRGKPPVTE---LFVNAQGMAMTRAGFEYI 233 Query: 125 ISTSGGNAG------LSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + A + + PH+LRHSC + D R + +LGH +IR T Y Sbjct: 234 LEKHAKAAAARCPTLIGRPLSPHLLRHSCAVLMLQATRDIRKVALWLGHADIRTTEVY 291 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 13 LTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ ++E+L++A + T R+ + + + G R SE+ LR+ I+LK + I Sbjct: 123 LSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRITG- 181 Query: 72 KKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K PL ++ +L+ R + ++++FL++ G +SRQ F++ I Sbjct: 182 KGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKHYAL 241 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 242 QANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYT 288 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 +L+ E++ + + N + ++ + G R SE+C L+++D+ L + + + + Sbjct: 111 YLSVDEVKKVFSSFQDNEIDQYNKTILVVLYSCGLRVSELCDLKLNDVHLTEQILKV-KG 169 Query: 72 KKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K P+ + V +K +L SIR + + F++R G+ +RQ + +I Sbjct: 170 KGDKERIIPISSYCVSQMKYYLDSIRFVWDVKNVSYFFVNRLGHICTRQYVHLMIKQKVN 229 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDR 190 L+ +I H RHS L + D R++Q+ LGH NI T YT R ++DR Sbjct: 230 ELNLNPKISAHSFRHSFATHLLDGDADLRIVQELLGHSNISTTQIYTHIQDKRLSSVYDR 289 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K++ K +T ++I++LL A + H R+ L + + G R +E +L +SDIDL Sbjct: 101 KSERKLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDLH 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS--IRTSYP----HAESEWVFLSRKGNPL 116 I + KG L +E W+ S P + + VF+S+K + + Sbjct: 161 RGSI--RTIGKGDKLRLVPLGQEA---AYWVERYCNESRPLLLKNKICDEVFVSQKRSGI 215 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 SRQ + I+ AG++ + PH LRH+ L N G+D R +Q LGH +I T Y Sbjct: 216 SRQLAWMIVKEYAEAAGIA-SLSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIY 274 Query: 177 T 177 T Sbjct: 275 T 275 >UniRef50_B5Z5W0 Integrase/recombinase n=2 Tax=Bacillus cereus group RepID=B5Z5W0_BACCE Length = 319 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 20/196 (10%) Query: 12 FLTHSEIESLLKAANTGP-------HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 +LTH E LL+ RN + + + G RASE+ L++ D+D Sbjct: 125 WLTHDEKNRLLRYVEDPKLIIKNEWRGYRNLAIINIMLLAGLRASEVSNLKLEDLD---N 181 Query: 65 CIYIHRLKKGFSTTHPLLNKEV-QALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQ--- 119 + R KG +N ++ + L WL++R ++S++VFLS++G+ + Sbjct: 182 GFILIRSSKGLKGRKLPINHDLGKVLNKWLNVRNEKEQFSDSQYVFLSQRGSKFTEMGLT 241 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY-TA 178 + + + G GLS PH LRH+ L G +I DY GH +++ T+ Y T+ Sbjct: 242 KLFITLEKKTGIEGLS----PHTLRHTFCHDLVEKGTPIHIIADYAGHSSVKTTMIYVTS 297 Query: 179 SNAGRFYGIWDRARGR 194 SN + + + GR Sbjct: 298 SNMEKKTAVEKLSVGR 313 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%) Query: 16 SEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKK 73 ++ LL A +N+ P A R+ + L + G R +E+ L + IDL + + K Sbjct: 118 DQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNLDSIDLHESQLLV--TGK 175 Query: 74 GFSTTH-PLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQFYHIISTSGGN 131 G T P+ + A++ WL +R ++ +F+S+ G LS + Sbjct: 176 GNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPSSVQQRLKRHALE 235 Query: 132 AGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRA 191 GL +HPH LRHS L D R +Q+ LGH ++ T YT + ++D A Sbjct: 236 RGLDAHLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHLDFQHLAQVYDGA 295 Query: 192 RGR 194 R Sbjct: 296 HPR 298 >UniRef50_Q5SI41 Putative phage integrase/recombinase n=1 Tax=Thermus thermophilus HB8 RepID=Q5SI41_THET8 Length = 293 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 6/161 (3%) Query: 17 EIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFS 76 E++ LL AA G + R+ L ++ + G RASE+ LR+SD+ KA+ + + R K G Sbjct: 115 EVKKLLAAAEMGKNPLRDKALVMVLWDTGLRASEVLGLRVSDV--KAEAVRVRR-KGGAV 171 Query: 77 TTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSL 136 P+ +A+ + R P ++ + +FL+R G PL+ ++ AGL Sbjct: 172 QWVPVSLPTYRAILAY--ARAERPPSDHDALFLTRSGLPLAYDGLKMVLRRLAEYAGLPP 229 Query: 137 EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + PH R A+ G+ + +Q LGH++ T Y Sbjct: 230 K-PPHAFRRGAAVAMVKNGMPSYALQAMLGHKSPVMTAHYV 269 >UniRef50_Q98AE4 Integrase/recombinase n=1 Tax=Mesorhizobium loti RepID=Q98AE4_RHILO Length = 237 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 8/178 (4%) Query: 11 NFLTHSEIESLL-KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +L EI+S+L + P R+Y L L F G R EI LRI D+ L + C Sbjct: 22 EYLEEPEIKSVLARIDRRTPSGQRDYALFSLMFNTGARVQEILNLRICDLRLVSPCQVRL 81 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW-VFLSRKGNPLSRQQFYHI---- 124 K P+ Q L+ ++ + S +E VFL+ +G PL+R ++ Sbjct: 82 HGKGNKVRLCPIWRNTAQLLQELINTQHSPSDNPAEQRVFLNDRGTPLTRFGVRYLLRKY 141 Query: 125 ISTSGGNAGLSLE--IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + G E IHPH LRH+ L G+D I +LGH + T+ Y ++ Sbjct: 142 VDMAAGEESTLAEKSIHPHSLRHTTAIHLLKAGVDIATISQWLGHSGLNVTMRYARAD 199 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 5/165 (3%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 RN + + + G R SE+ L++SDI + + + R K P+ ++ L+N+ Sbjct: 158 RNMAMIEVLYGCGLRVSELVGLKVSDIIFETRTLRC-RGKGNKERIVPIGEYALEVLQNY 216 Query: 93 LS---IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 L R H ++E +FL+ +G L+RQ + I+ G+ I+PH RHS Sbjct: 217 LEHDRERLRGKH-KTEVLFLNSRGTALTRQGIWDILKKWAQTHGVQENIYPHKFRHSFAT 275 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 L + G D R +Q+ LGH +I T YT + R ++ +A R Sbjct: 276 HLLDHGADLRSVQEMLGHADIATTQIYTHLSRQRLLEVFRKAHPR 320 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 13 LTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ +++SLL+A + P R+ + L + G R +E+ L + +I L+ + + Sbjct: 135 LSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVIG- 193 Query: 72 KKGFSTTHPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLSRQQFYHIIST 127 K G P+ V ++ + I P S+ VF S++ ++RQ F++ I Sbjct: 194 KGGKERLVPMGENAVDWIETF--IEQGRPQLLGDNSSDVVFPSKRAKQMTRQTFWYRIKH 251 Query: 128 SGGNAGLSLEI-HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 AG+ E+ PH+LRH+ L N G D R++Q LGH ++ T YT R Sbjct: 252 YSVIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQ 311 Query: 187 I 187 I Sbjct: 312 I 312 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 3/168 (1%) Query: 11 NFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 +LT +++ LL + + RN C+ L + G R SE ++I DI + + + Sbjct: 112 EYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFRDYYVRVM 171 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSG 129 K+ P + L +L S+ S+ F KG +S + ++ G Sbjct: 172 G-KESKERIVPFYKELGDLLTKYLKKYGSFSQL-SDPFFKGSKGKAISVRSIQLLLEKKG 229 Query: 130 GNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 L ++HPH+LRHS L + G D R++Q LGH N+ T YT Sbjct: 230 RELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYT 277 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 3/167 (1%) Query: 13 LTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ ++E+L+ A + R+ + + + G R SE+ LR+ I+LK + I Sbjct: 123 LSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGFVRITG- 181 Query: 72 KKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 K PL ++ +L+ R + ++++FL++ G +SRQ F++ I Sbjct: 182 KGNKERLVPLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQNFWYAIKRYAL 241 Query: 131 NAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 242 QANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYT 288 >UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria (class) RepID=A0QJ30_MYCA1 Length = 301 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 5/169 (2%) Query: 29 PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQ 87 P A R+ + + + G R SE+C L I D+D + + + L KG + P + Sbjct: 134 PIALRDRLIVEMLYATGIRVSELCGLDIDDVDTGRRLVRV--LGKGNKQRSVPFGAPAGE 191 Query: 88 ALKNWLSI-RTSYPHAES-EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRH 145 AL WL+ R + +AES + L +G L +Q ++ + + ++ PH LRH Sbjct: 192 ALHAWLADGRPALANAESGPALLLGARGRRLDVRQARTVVHQTIAAVSGAPDMGPHGLRH 251 Query: 146 SCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 S L G D R++Q+ LGH ++ T YT R + D+A R Sbjct: 252 SAATHLLEGGADLRVVQELLGHSSLATTQLYTHVAVSRLRAVHDQAHPR 300 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 13/204 (6%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAA-------RNYCLTLLCFIHGFRASEICRLRI 56 K K +FL ++ LL + N G A RN+ L + G R SE+ + Sbjct: 121 KLGTKIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGVRVSELAGMDE 180 Query: 57 SDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKNWLSIRTS-YPHAE--SEWVFLSRK 112 SD+D + + L KG P+ K + A+K +L + S +P A +F + + Sbjct: 181 SDVDFHEGMVRV--LGKGSKERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNAR 238 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G L+ + + ++ GL + PH LRH+ L N G D R IQ+ LGH N+ Sbjct: 239 GRRLTTRSVHRLLRMELRRCGLWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLST 298 Query: 173 TVWYTASNAGRFYGIWDRARGRQR 196 T YT + + ++D A R R Sbjct: 299 TQRYTHVHVDQLMKVYDAAHPRSR 322 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 13 LTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 ++ ++++LL A + P R+ + L + G R +E+ L + +I L+ + + Sbjct: 120 ISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVTG- 178 Query: 72 KKGFSTTHPLLNKEVQALKNWLSIRTSYP----HAESEWVFLSRKGNPLSRQQFYHIIST 127 K G P+ + ++ + I+ P S+ VF S++ ++RQ F+H I Sbjct: 179 KGGKERLVPMGENAIDWIETF--IKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKF 236 Query: 128 SGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 AG+ + + PH+LRH+ L N G D R++Q LGH ++ T YT R Sbjct: 237 YAVIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQ 296 Query: 187 I 187 I Sbjct: 297 I 297 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 11 NFLTHSEIES-LLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 FL E+E LL P R+ + L + G R SE L + D ++ + + Sbjct: 113 TFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWDRVSETVRV- 171 Query: 70 RLKKGFSTTH-PLLNKEVQALKNWLS------IRTSYPHAESEWVFLSRKGNPLSRQQFY 122 KG + P+ V A+++++ +R + P + +FL+ +G LS + Sbjct: 172 -FGKGRKERYVPVGKMAVSAVESYIHEARPKLLRANDP---TSHLFLNYRGGALSDRSIR 227 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I+ A + +I PH +RHS L N G D R +Q+ LGH++++ T YT + Sbjct: 228 KIVEKRLDEAAMQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTHVSKE 287 Query: 183 RFYGIWDRARGR 194 R Y ++ A R Sbjct: 288 RLYAVYKGAHPR 299 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 8/180 (4%) Query: 13 LTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 L+ EI LL P + + L + G R +E+ +R+ + L+ +I+ + Sbjct: 122 LSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLHLEVG--FINVI 179 Query: 72 KKGFST-THPLLNKEVQALKNWLS---IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 KG P+ +K VQAL+ +L + P + + VFL+ +G P + + I Sbjct: 180 GKGNKERVVPVGSKAVQALQRYLESGRPKLVTPRSPAN-VFLTMRGTPFAAVTLWKRIKD 238 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 +G++ + PHMLRHS L G D R+IQ+ LGH NI T YT + R + Sbjct: 239 RVKRSGVARNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHVSGSRLREV 298 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 2/164 (1%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R+ L L + G R SE C L +D+DL+ + + K G PL V A++ W Sbjct: 153 RDTALLELLYSAGLRISEACNLDRADVDLRGGELRVRHGKGGKQRMVPLGRTAVAAIEAW 212 Query: 93 LSIRT-SYPHAESEW-VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 L RT + P + +F + G L+ ++ ++ L + PH LRH+ Sbjct: 213 LQARTRAKPQLDPMGPIFTGQLGKRLNSREGQRLLEKWRARLDLPESVTPHALRHAFATH 272 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGR 194 L G D R IQ+ +GH ++ T YT + ++D A R Sbjct: 273 LLQAGADLRAIQEMMGHASLSATQKYTHLDMQALAKVYDAAHPR 316 >UniRef50_A6NUV3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NUV3_9BACE Length = 344 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 7/168 (4%) Query: 12 FLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRL 71 +L+ E LL++ + G + R+YC+ ++ G R SE+ L ++DI + + L Sbjct: 147 YLSLDESIQLLESVD-GENKERDYCILIIFLNCGLRISELVGLNLTDI----RKDQLRVL 201 Query: 72 KKGFSTTHPLLNKEV-QALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGG 130 KG LN+ QA+ +WL++R + + +F++R+ ++ +++I Sbjct: 202 GKGNKERILFLNEACRQAIDDWLAVRGTQGIIDKNALFITRRHTRMTTDAVHYMIKNRLT 261 Query: 131 NAGLSLEIH-PHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 AGL ++ H LRH+ + G+D R +Q+ LGH ++ T YT Sbjct: 262 AAGLDASMYSAHKLRHTAATLMLQNGVDVRTLQEVLGHDHLNTTQIYT 309 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 4/168 (2%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFST-THPLLNKEVQALKN 91 R+ + L + G R E+ L I D+DL + + KG T PL K A++ Sbjct: 176 RDKAMFELLYSSGLRVGELVALDIVDVDLAD--LRVRVTGKGNKTRLVPLGIKAADAIRR 233 Query: 92 WLSIRTSYPHAESEWVFLSRK-GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 +L R + + +F+S K G LS + + + AG++ ++PH+LRH Sbjct: 234 YLPHRNLWVEQMDQALFISEKLGTRLSTRAVQQRLKVAATRAGIAQNMYPHLLRHCFASH 293 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 + + D R +Q+ LGH +I T YT + + ++DRA R H Sbjct: 294 MLSGSGDLRAVQEMLGHSDISTTQIYTHVDFAKLTQVYDRAHPRATHV 341 >UniRef50_A5N3B5 Conserved protein n=3 Tax=Clostridiales RepID=A5N3B5_CLOK5 Length = 199 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Query: 9 KRNFLTHSEIESLLKA-ANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 K +LT E SL K NT H+ R+ + + + G R SEI L++ D + + Sbjct: 8 KIKYLTQQEAYSLFKTIENTYTSHSLRDLVIFRIAYRCGLRVSEIALLKMQDYNASKGEL 67 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIS 126 Y RLK + T L +K L + I + + S+ +F S+K NP+SRQ +++ Sbjct: 68 YCRRLKGSNNNTLRLDSKTKYILDKY--IVENNITSTSQVLFSSQKNNPISRQTLDYLMK 125 Query: 127 TSGGNAGLSLEI--HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY---TASNA 181 AG+ + H H L+H+ LA +D + +Q +LGH+++ +T Y T Sbjct: 126 KYCSMAGIEDKSKHHFHALKHTTAVHLAESDMDIKELQWWLGHKSVSNTEIYFQFTTKQQ 185 Query: 182 GRFYGIWDR 190 R Y D Sbjct: 186 DRMYAKLDE 194 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Ta... 271 1e-71 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 252 5e-66 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 249 5e-65 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 246 2e-64 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 246 4e-64 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 244 1e-63 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 242 7e-63 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 241 1e-62 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 241 2e-62 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 240 2e-62 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 240 2e-62 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 240 2e-62 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 240 2e-62 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 239 4e-62 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 239 5e-62 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 236 2e-61 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 236 2e-61 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 236 3e-61 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 236 3e-61 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 236 3e-61 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 236 3e-61 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 236 4e-61 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 236 4e-61 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 236 4e-61 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 236 4e-61 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 236 4e-61 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 236 5e-61 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 235 5e-61 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 235 8e-61 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 234 9e-61 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 234 1e-60 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 234 1e-60 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 234 1e-60 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 234 2e-60 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 234 2e-60 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 234 2e-60 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 234 2e-60 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 234 2e-60 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 234 2e-60 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 233 2e-60 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 233 3e-60 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 233 3e-60 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 232 3e-60 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 232 3e-60 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 232 4e-60 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 232 4e-60 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 232 4e-60 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 232 6e-60 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 232 6e-60 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 232 7e-60 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 231 8e-60 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 231 1e-59 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 231 1e-59 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 231 1e-59 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 230 2e-59 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 230 2e-59 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 230 3e-59 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 230 3e-59 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 230 3e-59 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 229 3e-59 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 229 3e-59 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 229 4e-59 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 229 5e-59 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 229 6e-59 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 229 6e-59 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 229 6e-59 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 228 9e-59 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 228 1e-58 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 227 1e-58 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 227 1e-58 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 227 2e-58 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 227 2e-58 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 227 2e-58 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 227 2e-58 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 227 2e-58 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 227 2e-58 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 227 2e-58 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 226 3e-58 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 226 3e-58 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 226 3e-58 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 226 3e-58 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 226 4e-58 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 226 4e-58 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 226 4e-58 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 226 5e-58 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 225 7e-58 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 225 8e-58 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 225 8e-58 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 225 9e-58 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 224 9e-58 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 224 9e-58 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 224 1e-57 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 224 1e-57 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 224 1e-57 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 224 1e-57 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 224 2e-57 UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter ... 224 2e-57 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 224 2e-57 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 223 2e-57 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 223 2e-57 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 223 2e-57 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 223 2e-57 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 223 2e-57 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 223 3e-57 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 223 3e-57 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 223 3e-57 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 223 3e-57 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 223 3e-57 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 222 4e-57 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 222 5e-57 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 222 5e-57 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 222 6e-57 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 222 6e-57 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 222 7e-57 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 222 7e-57 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 221 8e-57 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 221 8e-57 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 221 8e-57 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 221 9e-57 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 221 9e-57 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 221 1e-56 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 221 2e-56 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 221 2e-56 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 221 2e-56 UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ... 220 2e-56 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 220 2e-56 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 220 2e-56 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 220 2e-56 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 220 2e-56 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 220 3e-56 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 219 3e-56 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 219 3e-56 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 219 4e-56 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 219 5e-56 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 219 6e-56 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 219 6e-56 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 219 6e-56 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 218 7e-56 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 218 7e-56 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 218 8e-56 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 218 1e-55 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 217 1e-55 UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ... 217 1e-55 UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phy... 217 2e-55 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 217 2e-55 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 216 3e-55 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 216 3e-55 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 216 3e-55 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 216 3e-55 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 216 4e-55 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 216 4e-55 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 216 5e-55 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 216 5e-55 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 216 5e-55 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 215 8e-55 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 214 1e-54 UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae... 214 1e-54 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 214 1e-54 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 214 1e-54 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 214 1e-54 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 214 1e-54 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 214 2e-54 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 213 3e-54 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 213 3e-54 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 213 3e-54 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 213 3e-54 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 213 3e-54 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 212 4e-54 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 212 4e-54 UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX 212 5e-54 UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family ... 212 5e-54 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 212 5e-54 UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collins... 212 5e-54 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 212 6e-54 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 212 6e-54 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 212 7e-54 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 212 8e-54 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 211 8e-54 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 211 8e-54 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 211 8e-54 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 211 9e-54 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 211 1e-53 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 211 1e-53 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 211 2e-53 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 210 2e-53 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 210 2e-53 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 210 2e-53 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 210 2e-53 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 210 2e-53 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 210 3e-53 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 210 3e-53 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 209 4e-53 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 209 4e-53 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 209 4e-53 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 209 5e-53 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 209 5e-53 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 209 5e-53 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 209 6e-53 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 209 6e-53 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 208 7e-53 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 208 8e-53 UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acido... 208 8e-53 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 208 8e-53 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 208 9e-53 UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=... 208 9e-53 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 208 1e-52 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 207 1e-52 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 207 1e-52 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 207 1e-52 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 207 2e-52 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 207 2e-52 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 207 2e-52 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 207 2e-52 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 207 2e-52 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 207 2e-52 UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Br... 206 3e-52 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 206 3e-52 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 206 3e-52 UniRef50_B5ENS4 Integrase family protein n=2 Tax=Acidithiobacill... 206 5e-52 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 206 5e-52 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 205 6e-52 UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Prote... 205 6e-52 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 205 6e-52 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 205 8e-52 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 204 1e-51 UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylaci... 204 1e-51 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 204 2e-51 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 204 2e-51 UniRef50_C2KRF2 Possible integrase/recombinase XerD n=2 Tax=Mobi... 203 3e-51 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 203 3e-51 UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithio... 203 3e-51 UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella an... 203 4e-51 UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia so... 202 4e-51 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 202 6e-51 UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francise... 202 6e-51 UniRef50_A6G048 Site-specific recombinase, phage integrase famil... 202 8e-51 UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX 201 8e-51 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 201 9e-51 UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas a... 201 1e-50 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 201 1e-50 Sequences not found previously or not previously below threshold: UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 226 4e-58 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 214 1e-54 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 212 6e-54 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 211 1e-53 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 211 1e-53 UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candid... 206 5e-52 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 204 2e-51 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 202 4e-51 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 201 8e-51 UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae D... 201 1e-50 >UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Tax=Bacteria RepID=FIMB_ECO57 Length = 200 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID Sbjct: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ Sbjct: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN Sbjct: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 Query: 181 AGRFYGIWDRARGRQRHAVL 200 AGRFYGIWDRARGRQRHAVL Sbjct: 181 AGRFYGIWDRARGRQRHAVL 200 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 5/199 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +L + +T R+ + L + G R SE+ L++SD+ L Sbjct: 100 PKKSKMLPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHL 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES---EWVFLSRKGNPLSR 118 + + K P+ ++++L+ ES E++FL+ +GN +R Sbjct: 160 ELGFLQ-TIGKGNKQRIIPIGQAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTR 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ + AG+ ++ PH LRHS + G D R++Q+ LGH +I T YT Sbjct: 219 QGFWKNLKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTH 278 Query: 179 SNAGRFYGIWDRARGRQRH 197 R I+ +A R + Sbjct: 279 LTNERMKEIYQQAHPRAKK 297 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + ++ S++ +LL + A R+ + L + G R +E+ L + D+ Sbjct: 105 TPKVGKPLPDAISISQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDV 164 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESE-WVFLSRKGNPLS 117 DLK + K P+ + Q+++ +L IR + AE+E +FL+R+G+ L+ Sbjct: 165 DLKEGFVRCF-GKGRKERMIPIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ + I+ AGL + PH LRHS + + G D R +Q+ LGH NI T YT Sbjct: 224 RQGLWQILKGYAREAGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYT 283 Query: 178 ASNAGRFYGIWDRARGRQR 196 + +++A R + Sbjct: 284 HLTSEHIKRSYEKAHPRAK 302 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 246 bits (630), Expect = 2e-64, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 6/195 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D K F++ ++ E LL +T R+ + + G R SE+ + I+DID Sbjct: 109 TPKTDKKLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADID 168 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + R K P+ N + A++ +L R A++E +FL++ L+ + Sbjct: 169 FHSGIVKV-RGKGSKERILPVGNHALNAIQLYLEKR----KADNEALFLNKFHGRLTERS 223 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +I A + L + PH RHS L + G D R +Q++LGH ++ T YT Sbjct: 224 VARMIEKYMKKAAMHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVT 283 Query: 181 AGRFYGIWDRARGRQ 195 R ++D+ R Sbjct: 284 TERLKQVYDKTHPRA 298 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 2/192 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L EIES LK + P RN + + G R SE+ L I ++DL Sbjct: 99 PKIPMYLPEVLDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDL 158 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + K + K PL + V++LK +LS+R + + E +FL++KG ++RQ Sbjct: 159 EEKYVRCF-GKGEKERIVPLGDYAVESLKRYLSVRHLFNPKDKEALFLNKKGERITRQGV 217 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II GL ++ PH RHS L + G D R++Q+ LGH +I T YT + Sbjct: 218 WFIIKAYSKILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVS 277 Query: 182 GRFYGIWDRARG 193 + + ++ RA Sbjct: 278 SKLHEVYQRAHP 289 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K L+ E++ L++ N P R+ + L + G R SE+ L++ D++ Sbjct: 101 TPKIKRKLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLN 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAE-SEWVFLSRKGNPLSR 118 A + K P+ + ++ +L+ +R S +FL+ +G PLSR Sbjct: 161 PTAGFLRCM-GKGRKERIIPVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ I+ A L E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 QGFFKILGNYVEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 LTKSRLREVYQQYHPRS 296 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 3/198 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + FL + EIE L++ + R+ + L + G R SE LR D+D Sbjct: 106 TPKIAKRIPEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVD 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQ 119 ++IH K P + + L +++ +R + ++ +F++++G L+ + Sbjct: 166 FADNILHIH-GKGDKERLVPFYDLAKELLVSYIKDVRDVWATSDETALFVNQRGKKLTTR 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 ++++ + L + +HPHM RHS L + G D R +Q+ LGH ++ T Y Sbjct: 225 GVQYLMNKAVEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHV 284 Query: 180 NAGRFYGIWDRARGRQRH 197 + R ++ A R + Sbjct: 285 SKERLKAAYEHAHPRAKE 302 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA + + +I LL + + P R+ + L + G R SE+ L + D+DL Sbjct: 108 PKASKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLA 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + K P+ +K ++AL WL++R + + VFL+++G LS + Sbjct: 168 GREVRLL-GKGNKERIVPIGSKALEALNRWLAVRNQF-KPQDNAVFLNKRGGRLSHRSIQ 225 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G GL +HPH LRHS + D R +Q+ LGH N+ T YT + Sbjct: 226 LVMQKWGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQ 285 Query: 183 RFYGIWDRARGRQRHA 198 I+D A R + Sbjct: 286 HLAKIYDAAHPRAKRK 301 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 7/200 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K FLT + L++A + R+ + L + G R SE+C L + D+DLK Sbjct: 101 KIKRALPKFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLK 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIR-----TSYPHAESEWVFLSRKGNPLS 117 I + R K P+ K +ALK +L+IR + +F++ +G +S Sbjct: 161 EGLIKV-RGKGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRIS 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +Q I+ G+ +I PH LRH+ L G D R+IQ+ LGH ++ T YT Sbjct: 220 DRQVRRIVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQRH 197 + ++D++ + Sbjct: 280 HVDLKHLIEVYDKSHPLSKE 299 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L ++E LL +++T P R+ + + + G R +E+ L++ D+ Sbjct: 101 TPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI---RTSYPHAESEWVFLSRKGNPLS 117 L I K PL L+ +L + P +++VFL+ G L+ Sbjct: 161 LHMGFIQ-TIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLT 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ F+ I+ +G+ I PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 RQGFWKILKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 HVTKLRLKDVYKQFHPRA 297 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K L+ E+E LL+ R+ + L + G R SE+ L + D++L Sbjct: 103 PKVEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + + YI K P+ + V AL+ +L+ + + + +F++ G L+RQ Sbjct: 163 EMQ--YIRCNKGARERIVPIGSVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQ 220 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II A ++ +I PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 221 GFWKIIKQYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQL 280 Query: 180 NAGRFYGIWDRARGRQ 195 R I+ + R Sbjct: 281 AKNRIKEIYKKTHPRA 296 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K+ K L+ ++ +L+ T R+ + + G R SE+ + +SDID Sbjct: 98 PKSQKKLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTN 157 Query: 63 AKCIYIHRLKKGFS-TTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQ 120 + + + L KG PL K ++AL W+ R + E++FL+++G L+ + Sbjct: 158 EQTLKV--LGKGNKFRIVPLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARA 215 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + + IHPH+LRHS + D R +Q+ LGH NI T YT + Sbjct: 216 IQYRLKFWAQKNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLD 275 Query: 181 AGRFYGIWDRARGRQRHAV 199 I+D+A R + + Sbjct: 276 FQHLSKIYDQAHPRSKKKI 294 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K + L E+ +LL+ + + R+ + L + G R SE+ L + +++L Sbjct: 101 PKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAE-SEWVFLSRKGNPLSRQ 119 + + K PL + ++ L ++ IR +E +FL+ G PLSRQ Sbjct: 161 IMGFVRVF-GKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + +I +G A + + PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 AIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHV 279 Query: 180 NAGRFYGIWDRARGRQ 195 + + ++++ R Sbjct: 280 SKSQIRKMYNQFHPRA 295 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 1/195 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K L ++ LL+ + P A R+ + L + G R SE+ + DI Sbjct: 119 PKFAKPLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAA 178 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 I + R K P+ +K + ALK WL IR + + + VFLS K N +S +Q Sbjct: 179 NGEILV-RGKGNKERLIPVGSKALNALKKWLIIRPQFANPDEVAVFLSSKKNRISVRQVR 237 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 + G G+S ++HPH LRHS + D R +Q+ LGH ++ T YT + Sbjct: 238 LRMQEWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQ 297 Query: 183 RFYGIWDRARGRQRH 197 ++D R + Sbjct: 298 HLAKVYDNTHPRAKK 312 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L +E+E LL T P R+ + L + G R SE+ L+ +D+ Sbjct: 101 TQKTERALPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIELKTADVH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L I K P+ A++ +++ + S+ +FL+ G +SR Sbjct: 161 LSMGFIRCF-GKGRKERIVPIGEAAASAIEEYMTKARGKLLKNNVSDALFLNHHGKQISR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ + AG+ E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 QGFWKNLKKIALEAGIKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 VTKTRLKDVYKQFHPRA 296 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + L+ E+ S+L+ + + RN L L + G R SE+ +++ DI Sbjct: 101 RPKIEKTLPTVLSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQ 119 ++ + + K P+ + + A++N+L R +++++F++ +G LSR Sbjct: 161 MQQSYVIVT-GKGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRV 219 Query: 120 QFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+ ++ A L ++ PH LRHS L G+D R +Q+ LGH +I T YT Sbjct: 220 GFFKVLKKLASEANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQRH 197 + R ++++ R + Sbjct: 280 ISQSRLKQVYNKTHPRAKE 298 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + L EI LL + R+ + + G R SE+ L + D+ Sbjct: 105 PKKERRLPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDLHE 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNW-LSIRTSY---PHAESEWVFLSRKGNPLS 117 + + K P+ + + +K + +R E +FL+ + L+ Sbjct: 165 DLGLVRVL-GKGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ + +I +AG++ ++ PH LRH+ L G D R++Q+ LGH +I T YT Sbjct: 224 RQAIWQMIKKYCQSAGITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYT 283 Query: 178 ASNAGRFYGIWDRARGR 194 + ++ + R Sbjct: 284 NLSQKHILQVYQKTHPR 300 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 3/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++E+L+ A + + R+ + + + G R SE+ LR+ I+L Sbjct: 113 PKIGRALPKDLSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 K + I K PL ++ +L+ R + ++++FL++ G +SRQ Sbjct: 173 KQGFVRIT-GKGNKERLVPLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQN 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F++ I A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 232 FWYAIKRYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA 291 Query: 181 AGRFYGIWDRARGR 194 R + + R Sbjct: 292 QHRMQALHHQYHPR 305 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K L+ E+E LL R+ + L + G R SE+ L + DI+ Sbjct: 101 PKVEKKLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINF 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE--WVFLSRKGNPLSRQ 119 I + K T P+ + A+ +L ++ +S+ +F++ G L+RQ Sbjct: 161 DLGLIKCN--KGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II A ++ +I PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 219 GFWKIIKHYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQI 278 Query: 180 NAGRFYGIWDRARGRQ 195 + ++ + R Sbjct: 279 AKNKIKDVYKKTHPRA 294 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 5/191 (2%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 ++ E++ L A + T P R+ + + + G R SE+ L+ + ++L+ + + Sbjct: 112 LPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV- 170 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPH--AESEWVFLSRKGNPLSRQQFYHI 124 I K PL +Q LK +L+ +R + + + +FL+ +G ++RQ+F+ I Sbjct: 171 IAYGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQI 230 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 I G AGL + PH+LRHS + + G D R +Q+ LGH +I T YT R Sbjct: 231 IRAYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRL 290 Query: 185 YGIWDRARGRQ 195 ++D+ R Sbjct: 291 KKVFDKTHPRA 301 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 10/201 (4%) Query: 5 ADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDI---- 59 A + +T E+ +L+AA T R+ L + G R SE L + DI Sbjct: 160 AGKRLPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLAG 219 Query: 60 -DLKAKCIYIHRLKKG-FSTTHPLLNKEVQALKNWLSIRTSYPHAE---SEWVFLSRKGN 114 D + + KG PL + +AL+ +L A+ + +FL+ +G Sbjct: 220 DDTEQGPAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKGTPALFLNARGG 279 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 +SRQ + I+ + A ++ ++ PH LRHS L G D R++Q+ LGH ++ T Sbjct: 280 RISRQSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQ 339 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT A ++ A R Sbjct: 340 VYTLVTADTLREVYAAAHPRA 360 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANT--GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ E+E+LL AA++ ++ R+ L + G R SE L + DID Sbjct: 119 KLPRRLPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLDDIDF 178 Query: 62 KAKCIYIHRLKKGFSTTHP-LLNKEVQALKNWL-SIRTSYPHAESEW--VFLSRKGNPLS 117 + + + KG L ++ QAL+ +L +R + VFL+ G P+S Sbjct: 179 ETEPALVRLFGKGRKERISMLGHQACQALQAYLVRVRPTLAEKGQSRGRVFLNTYGKPMS 238 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ + II + A + +HPH LRH L G D R++Q+ LGH ++ T YT Sbjct: 239 RQTAWAIIQAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTTEIYT 298 Query: 178 ASNAGRFYGIWDRARGRQR 196 + ++ A R R Sbjct: 299 KVSKQMLLEVYASAHPRAR 317 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + LT EI LL A G A R+ L L + G R SE+ L + +DL Sbjct: 118 PKASRRIPGTLTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDL 177 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPLSRQ 119 + + + K P+ K ++AL +L+ R + + + +FL++ G PLSR Sbjct: 178 EHGFLRVF-GKGAKERVVPIGGKAIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRV 236 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ AGL+ + PH LRHS L + G D R IQ+ LGH +I T YT+ Sbjct: 237 MLWMLVKKYAKRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTSV 296 Query: 180 NAGRFYGIWDRARGRQR 196 + R D+ R R Sbjct: 297 ESQRLLEQHDKFHPRNR 313 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 13/210 (6%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + + FL EI LL +T P R+ L L + G R E+ L DID Sbjct: 143 TPKLERRLPVFLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVALNRGDID 202 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-----IRTSYPHAE------SEWVFL 109 + + K P+ ++ +QAL ++L +R P AE + +FL Sbjct: 203 YSEGWVIVW-GKGRKERAVPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPLFL 261 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 ++ G LS + ++ LS +I PH +RH+ + N G D R +Q+ LGH + Sbjct: 262 NKLGGRLSDRSVRRLLDRYVSQLALSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHAS 321 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQRHAV 199 + T YT R + RA RQR A Sbjct: 322 LSTTQIYTHVTTQRLRTEYLRAHPRQRRAA 351 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 4/200 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K +FLT +I +LL+A R+ + + G R SE+ L +SD D Sbjct: 113 TPRTGRKLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWD 172 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSR 118 A I + K P+ + +AL +WL R + P H +S+ +FL+R L+ Sbjct: 173 QDANIIRVL-GKGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTS 231 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ GL + PH LRH+ L + G D R +Q+ LGH+++ T YT Sbjct: 232 RSVGRMLEKYLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQRHA 198 + R +++A + + Sbjct: 292 VSTKRLLETYEKAHPHAQRS 311 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 4/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K ++ LT +EIE++L + + RN L + GFR SEIC L+++D+ Sbjct: 106 TPKKNSHLPQVLTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLH 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 + I K P+ + + + ES ++FL+ G+ +SR Sbjct: 166 DELGLIT-TIGKGQKQRIVPIGEMSLLYISKYFKESRPILLKDKESPYLFLNDHGHRISR 224 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + ++ AG+ +I PH LRHS L G D R++Q+ LGH +I T YT Sbjct: 225 QGIFKLVKEIAIKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIYTH 284 Query: 179 SNAGRFYGIWDRARGRQR 196 + ++R R + Sbjct: 285 VSQKHIREQYNRFHPRAK 302 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K LT E E LL+A P R+ + L + G R SE+ L D++L Sbjct: 101 PKVEKKPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSR 118 + + +G P + L +L S+ E+ +F +R+G +SR Sbjct: 161 ELHFLRCTGE-RGKERILPFGGVTAEWLDLYLREGRSHLILDERENPALFPNRRGGRISR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ ++ G AG++ +I PH LRHS L G D R +Q+ LGH + Y + Sbjct: 220 QGFWKLMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVS 279 Query: 179 SNAGRFYGIWDRARGR 194 + ++D R Sbjct: 280 RSRSNLKTVYDAFHPR 295 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 235 bits (601), Expect = 5e-61, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 5/193 (2%) Query: 5 ADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 + K LT E LL R+ + L + G R SE+ ++++D+++ Sbjct: 113 VEKKTPEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAM 172 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQF 121 + P + +ALK +L S ESE++F++ G +SRQ F Sbjct: 173 GYVLCRDS--DKERVIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGF 230 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II AG++ +I PH LRHS G L G D R +Q+ +GH +I T Y N Sbjct: 231 WKIIKFYSAQAGITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNV 290 Query: 182 GRFYGIWDRARGR 194 R I+ +A R Sbjct: 291 RRVREIYAKAHPR 303 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA K L E L++ P R+ L L + G R SE+C LR D+DL Sbjct: 127 PKAPRKLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLD 186 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + K G P+ + V AL+ W + + VF R G +S++ Sbjct: 187 SGLVTVL-GKGGKQRLVPVGSHAVAALRAW---QRDSGGSAQTHVFPGRAGGAISQRAVQ 242 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I G+ +HPHMLRHS + D R +Q+ LGH +I T YT + Sbjct: 243 IRIKQLAVRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQ 302 Query: 183 RFYGIWDRARGRQRHA 198 ++D A R + Sbjct: 303 HLAKVYDAAHPRAKRK 318 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 234 bits (599), Expect = 9e-61, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 14/209 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + D K +FL E+ LL+A P R+ + + G R SE+ + D+DL Sbjct: 103 PRKDRKLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT------------SYPHAESEWVFL 109 + I R K PL + ++A+K WL+ R + VF Sbjct: 163 DEGVVRI-RGKGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFT 221 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 ++ G L+ + ++ GL L PH LRH+ L + G D R +Q+ LGH++ Sbjct: 222 NKFGKRLTTRSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKS 281 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQRHA 198 + T YT + +++RA R R+ Sbjct: 282 LVTTQIYTHVSTAALKAVYERAHPRARNK 310 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + L+ +++SLL+A + P R+ + L + G R +E+ L + +I Sbjct: 123 ISPKLPKRLPKDLSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENI 182 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLS 117 L+ + + K G P+ V ++ ++ + S+ VF S++ ++ Sbjct: 183 SLRQGVVRV-IGKGGKERLVPMGENAVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMT 241 Query: 118 RQQFYHIISTSGGNAGLSLEI-HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 RQ F++ I AG+ E+ PH+LRH+ L N G D R++Q LGH ++ T Y Sbjct: 242 RQTFWYRIKHYSVIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIY 301 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R I + R Sbjct: 302 THVATERLKQIHAQHHPRA 320 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L+ EI+ +L N AR+ + + G R SE+C+L+I D+D Sbjct: 100 TPKLWQLIPDVLSLEEIDRILAIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD 159 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K G P+ + + A+ +LS R ++ +E++F+++K PL+R Sbjct: 160 --DTFVRVL-GKGGKERIVPIGQQAIAAIDGYLSFREGGENSRNEFLFITKKSKPLTRAL 216 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + ++ A + I PH RH+ L + G D R+IQD LGH +I T YT + Sbjct: 217 VWKLVKFYARQASIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYTHVS 276 Query: 181 AGRFYGIWDRARGRQ 195 R + R Sbjct: 277 QIRLQQAFQAFHPRN 291 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 1/196 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + L E+ LL+ P A R+ + L + G R +E+ + + D+ L+ Sbjct: 113 PRKKRPLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLR 172 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + I + K P V+ + WL +R+ +F+S+ G +S + Sbjct: 173 SGEIRV-IGKGNKERKVPFAGMAVEWVGKWLKVRSGLADPSEPALFVSKLGTRISHRSVQ 231 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G ++ I PH LRHS + + R +Q+ LGH NI T YT + Sbjct: 232 KRMAEWGQKQAVASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQ 291 Query: 183 RFYGIWDRARGRQRHA 198 ++D+A R R Sbjct: 292 HLADVYDQAHPRARKK 307 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +++ N+ P RN L L + G R EI L ++D+DL Sbjct: 98 PKIPKTLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDL 157 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K PL + +LK +L +SE +FL+++G L+ + Sbjct: 158 TQGYVRVT-GKGRRQRIVPLGKYALDSLKLYLEAGRPAFKPKSEKLFLNQQGAGLTVRGI 216 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++IS AGL+ +I PH RHS L G D R +Q+ LGH+ + T YT + Sbjct: 217 RYLISQIVKKAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLSK 276 Query: 182 GRFYGIWDRARGRQRH 197 R ++ R R R Sbjct: 277 ERLREVYLRTHPRSRE 292 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 3/196 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 + + + L+ EI L++A G R+ + + + G R SE+ RL+++DID Sbjct: 129 RPRVGRRLPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADID 188 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQ 119 + K I + K G PL + A+ +L +R ++P A ++ +FLS +G PL+RQ Sbjct: 189 -RRKGIVMALGKGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQ 247 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ G++ PH LRHS L G D R +Q LGH N+ T YT Sbjct: 248 AVWKLLGGYARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYTHL 307 Query: 180 NAGRFYGIWDRARGRQ 195 + RA R Sbjct: 308 ADDHVRAAYRRAHPRA 323 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 2/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+ E LL+ + P A R+ L L + G R +E L + +DL Sbjct: 104 PRRPRRLPGVLSPDEAARLLEGSPEDDPLALRDRALYELIYSSGLRLAEAVGLDLGRLDL 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K + P+ K +AL+ WL++R + A+ VF+S++G LS + Sbjct: 164 TEGLVEV-VGKGAKTRRVPVGGKAREALQAWLAVRPALAGADEPAVFVSQRGGRLSARSV 222 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ +G+ +HPHMLRHS L D R +Q+ LGH +I T YT + Sbjct: 223 QARLARLATLSGVGRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDF 282 Query: 182 GRFYGIWDRARGRQRHA 198 ++D+A R R Sbjct: 283 QHLARVYDQAHPRARKG 299 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 7/188 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + +L+ E++ L++A++ P R+Y + L G R SE+C L+I D+D Sbjct: 99 PKRPRQMPKYLSEDEVKRLIEASSENP---RDYAIISLLAYSGLRVSELCNLKIEDVDFN 155 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + +Y+H K + + ++AL+N+L R + E++F S+K N +SR Q + Sbjct: 156 ERIVYVHSGKGDKDRIVVVSPRVIEALQNYLYTRED----DMEYLFASQKSNKISRVQVF 211 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I+ AG+ E+ PH+LRH+ L G+D R IQ +LGH ++ T YT + Sbjct: 212 RIVKKYAEKAGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDA 271 Query: 183 RFYGIWDR 190 ++D+ Sbjct: 272 LLKSVYDK 279 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L E++ LL + R+ + L + G R SE+ RL++SDI+ + Sbjct: 102 PKLWLRLPKALEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFE 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLSRQQ 120 A I + K P+ + + +KN+L +R + SE+VFL+ +G P++RQ+ Sbjct: 162 AGFIRVK-GKGDKERVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQR 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ I G AG+ + PHM+RHS L G D R +Q LGH +I T YT + Sbjct: 221 FWQNIKAIGRIAGV--NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVS 278 Query: 181 AGRFYGIWDRARGRQR 196 R + + R + Sbjct: 279 MDRLRKEYLKHHPRAK 294 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + D + FLT +E+ LL+ ++ P R+ L + G R SE+ +L I ++DL Sbjct: 101 PRLDKRLPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 + I + K + +Q+++ +L++ + + +FL+ G LS + Sbjct: 161 HSHQIRVW-GKGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSAR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F + AG+ +HPHMLRH+ L + G D R++Q+ LGH N+ T YT Sbjct: 220 SFQERLDKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHV 279 Query: 180 NAGRFYGIWDRARGRQR 196 + ++ + + Sbjct: 280 TKSQARKVYMSSHPLAK 296 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 3/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++E+L++A + T R+ + + + G R SE+ LR+ I+L Sbjct: 113 PKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 K + I K PL ++ +L R + ++++FL++ G +SRQ Sbjct: 173 KQGYLRIT-GKGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQN 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F++ I A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 232 FWYAIKHYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA 291 Query: 181 AGRFYGIWDRARGR 194 R + ++ R Sbjct: 292 QVRMQQLHEKHHPR 305 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 14/204 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ E+ SLL+ G AAR+ + L + G R SE+ L ++ +DL Sbjct: 133 PKGEGYLPVVLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDL 192 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIR------------TSYPHAESEWVFL 109 + + K P+ V A++ +L R ++ + + Sbjct: 193 ADGMVRV-VGKGNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLV 251 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 + +G L+ + ++ AG++ + PH LRHS L MG D R++Q+ LGH + Sbjct: 252 NSRGGRLTSRSIERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHAS 311 Query: 170 IRHTVWYTASNAGRFYGIWDRARG 193 + T YT N ++D+A Sbjct: 312 LSTTQRYTHLNLDHLTAVYDQAHP 335 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 1/195 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + L E+ LL + P A R+ + L + G R +E+ + + I L Sbjct: 106 PRKARPLPKNLDVDEMNQLLDVNDDDPLAIRDRAMMELMYGAGLRLAELVGIDVRHISLS 165 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K P + + WL +R + AE +F+S+ G +S + Sbjct: 166 KGDLRV-IGKGDKERVVPFSGLAREWVAKWLKLRDNIALAEEPALFVSKLGTRISTRNVQ 224 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G +S I+PH LRHS + D R +Q+ LGH N+ T YT + Sbjct: 225 KRMAEWGQKQAVSSHINPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQ 284 Query: 183 RFYGIWDRARGRQRH 197 ++D A R + Sbjct: 285 HLAKVYDEAHPRAKK 299 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 232 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FLT ++ +L + + P A RN + + G R SE+C L ++++DL Sbjct: 120 PKLNRTIPEFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + K P + L +L R Y E +VF+S++G P++ + Sbjct: 180 NERILTVT-GKGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRA 238 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I++ +G +AGL+ +HPH+LRHS L + G+D R +Q+ LGH ++ T YT Sbjct: 239 VQLILAQAGQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVT 298 Query: 181 AGRFYGIWDRARGRQRHAV 199 R D A + + Sbjct: 299 VDRLKQSVDAAHPHSKSVL 317 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 232 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 1/193 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K L + + R+ L L + G R +E+ L + DID Sbjct: 108 PKTPKKLPKTLDVDQTAQFVAVEGDDFIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWG 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K + T P+ + + ALK+WLS R Y A +F++++G +S + Sbjct: 168 DAMVTVT-GKGSKTRTLPVGSVAIAALKDWLSQREQYAPASEPALFITQRGKRISHRAVQ 226 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 + G+ +HPHMLRHS + D RL+Q+ LGH NI T YT + Sbjct: 227 LRLQQLSVQQGMDNPVHPHMLRHSFASHMLESSGDLRLVQELLGHANISTTQIYTHLDFQ 286 Query: 183 RFYGIWDRARGRQ 195 ++D+A R Sbjct: 287 HLAKVYDKAHPRA 299 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 232 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K +K +FL E++ L KA P R+ + L + G R E +L ++DIDL Sbjct: 125 PKQASKLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADIDL 184 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT----SYPHAESEWVFLSRKGNPLS 117 + ++ K P+ + AL ++ ++E++ +FL+ +G PL+ Sbjct: 185 RIGTAFVK-GKGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPLT 243 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + +++ A + I PH LRHS L N G D R++Q+ LGH ++ T YT Sbjct: 244 DRSIRRMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYT 303 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ R Sbjct: 304 HVTKDRLREVYKNHHPRA 321 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 232 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 87/196 (44%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 ++ + L + LL A R+ + L + G R SE+ L + D+D Sbjct: 103 PPRSGRRLPRLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDF 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A +++ + K G + P+ K ++A+ WL R A +FLSR+G ++ + Sbjct: 163 GAGSVFVRKGKGGKARYVPVGAKALEAIGAWLEARRVLTGAGQPALFLSRQGRRIAPRTV 222 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + GLS +HPHMLRHS + D R +Q+ LGH + T YT + Sbjct: 223 EMRLERWRAKLGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDF 282 Query: 182 GRFYGIWDRARGRQRH 197 R ++D++ R R Sbjct: 283 QRLAAVYDQSHPRARR 298 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 232 bits (593), Expect = 4e-60, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG----PHAARNYCLTLLCFIHGFRASEICRLRIS 57 K + + L + +L++A P AR+ + L + G R SE+ L ++ Sbjct: 112 TPKREQRLPFHLNIDQTVTLIEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVA 171 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLS 117 D+D A + + + K G P+ + ++AL+ +L+ R A+ +FL +G ++ Sbjct: 172 DLDRAAGMVRV-QGKGGKERIVPVGSAALEALEQYLAGRGQL--ADDAPLFLGCRGARIN 228 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R+ ++ I PH LRH+ + G D R IQ+ LGH ++ T YT Sbjct: 229 RRTVAQLVKRWASGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYT 288 Query: 178 ASNAGRFYGIWDRARGRQRH 197 R ++D+A R R Sbjct: 289 HVGLDRLLEVYDKAHPRARE 308 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K FL E+ LL+ R+ + L + G R +E+ L+ SD+DL Sbjct: 105 TPKIEKKLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDL 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNPL 116 ++ + I K P+ AL+ +L+ + + + + +++F++ KG PL Sbjct: 165 VSRFV-IVCGKGAKERIVPIGRTAAAALERYLADARPRLYSKWRKEQHQFLFINSKGGPL 223 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + II N ++ ++ PH +RH+ + N G D R +Q+ LGH N+ T Y Sbjct: 224 TDRSVRRIIDKYIANLAVAKKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLY 283 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R ++ R Sbjct: 284 THVTKERLKAVYRETHPRA 302 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 7/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +++ESLL A +T R+ + + + G R SE+ L + ++ Sbjct: 114 TPKIGRSLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVN 173 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS-----YPHAESEWVFLSRKGNP 115 L A + I K + PL AL ++L+ + VFL+ +G Sbjct: 174 LNAGWLQIT-GKGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGY 232 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 ++RQ F+++I AG+ ++ PH LRH+ L N G D R +Q LGH ++ T Sbjct: 233 MTRQNFWYMIKKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQI 292 Query: 176 YTASNAGRFYGIWDRARGR 194 YT R + + R Sbjct: 293 YTHVATARLQQLHEAHHPR 311 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 4/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +EI++L+ +T P R+ + L + G R SE+ LR+ + Sbjct: 98 TPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLH 157 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSR 118 L + + K P+ + + +L H + + VF++ G+ L+R Sbjct: 158 LAMNLLQVT-GKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTR 216 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + + G+ ++ PH LRHS L G D R++Q+ LGH +I T YT Sbjct: 217 QVIWKNLKAYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTH 276 Query: 179 SNAGRFYGIWDRARGR 194 + ++ + R Sbjct: 277 LSNQHLVAVYHKTHPR 292 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 231 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 L+ E+ L +A + P R+ + + + G R SE+ L++ ++L + + Sbjct: 109 LPKVLSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYV- 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSY--PHAESEWVFLSRKGNPLSRQQFYHI 124 I K PL + ++ LK +L +R + + + +FL+ +G ++RQ+F+ + Sbjct: 168 IAYGKGAKERLIPLGHYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFWQL 227 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 I G ++ + PH+LRHS + + G D R +Q+ LGH +I T YT R Sbjct: 228 IKNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNHRL 287 Query: 185 YGIWDRARGRQ 195 I+D++ R Sbjct: 288 KAIYDKSHPRA 298 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 5/199 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + ++ ++++LL A + P R+ + L + G R +E+ L + +I Sbjct: 108 VSPKLPQRLPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENI 167 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLS 117 L+ + + K G P+ + ++ ++ S+ VF S++ ++ Sbjct: 168 SLRQGVVRVT-GKGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMT 226 Query: 118 RQQFYHIISTSGGNAGLS-LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 RQ F+H I AG+ + PH+LRH+ L N G D R++Q LGH ++ T Y Sbjct: 227 RQTFWHRIKFYAVIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIY 286 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R I + R Sbjct: 287 THVATERLKQIHSQHHPRA 305 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 6/197 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAAN----TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 ++ + LT ++ L++A + P A R+ + L + G R SE L I I Sbjct: 131 RSGQSLPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSI 190 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSR 118 D + + K P+ + A+ WL R S + +FL+ +GN L R Sbjct: 191 DRNHAYVRV-VGKGRKERLVPIGAPALHAIDAWLVRGRPSMVKRSDKALFLNARGNRLGR 249 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + + GL + PH LRHS L G D R +Q+ LGH ++ T YTA Sbjct: 250 QSVWKFLHAAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTA 309 Query: 179 SNAGRFYGIWDRARGRQ 195 + ++ + R Sbjct: 310 VSIDNLREVYATSHPRA 326 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K+ L +LL A A R+ + L + G R SE+ L ++D+ Sbjct: 118 PPKSPKTLPKALPVDATSALLDAPIDPEDDLALRDQAMFELLYSCGLRLSELTGLDLADL 177 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 DL + H K + P+ + QAL+ WL+IR S P VF + G LS + Sbjct: 178 DLGEGLLTAH-GKGNKTRILPIGRQARQALERWLAIRPSQPG--EGAVFTGKSGRRLSGR 234 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q + G +HPHMLRHS L D R +Q+ LGH N+ T YT+ Sbjct: 235 QVEKRLEQWAQRHGSDRHVHPHMLRHSFASHLLQSSGDLRAVQELLGHANLSTTQIYTSL 294 Query: 180 NAGRFYGIWDRARGRQR 196 + ++D R + Sbjct: 295 DFQHLAKVYDATHPRAK 311 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN---TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K L+ SE+ LL AA P A RN + L + G R +E+C L + + Sbjct: 142 PKLGRPLPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSV 201 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE---SEWVFLSRKGNP 115 D + + K G P+ + ++A+ +L R + + S +FL+ +G Sbjct: 202 DAGLGYVRVL-GKGGKERIVPVGEQALEAISRYLKQGRPALARRQREVSPALFLNHRGRR 260 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+S A L I PH LRH+ L + G D R +Q+ LGH + T Sbjct: 261 LSVRGAQDILSRIADGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQI 320 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT +A R I+ + R Sbjct: 321 YTHVSAERLKEIYHKTHPRA 340 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ E++ LL TGP A R+ L L + G RASE +++ ++D+ Sbjct: 119 PPRGKKLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDV 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNPLSRQ 119 + K P+ +K + AL+++L+ E + VF++++G+ L+RQ Sbjct: 179 DDGILR-ANGKGNKERLVPIGSKALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQ 237 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Y I+ AGL ++ PH LRH+ L G D R +Q+ LGH +I T YT Sbjct: 238 GLYKIVQRHARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHL 297 Query: 180 NAGRFYGIWDRARGRQR 196 +A R ++ A R + Sbjct: 298 SAERLRDVYFDAHPRAQ 314 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + +++ LL+ + P R+ L L + G R SE+ R+ ++DL Sbjct: 120 PRTERYLPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 A+ I + K P+ K A++ +L VFLS +G L+ Sbjct: 180 DARIIRVT-GKGNKMRLVPVGQKACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTV 238 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + + I+ NAGL + ++PH+LRHS L + G D R+IQ+ LGH +I T YT Sbjct: 239 RIWQIVKACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHV 298 Query: 180 NAGRFYGIWDRARGRQR 196 + R + R R + Sbjct: 299 DQQRLKAVHHRFHPRAK 315 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L E++ L+ + R+ + L + G R SE+C L I ID Sbjct: 112 PKLWQLLPDILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSID- 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + I ++ K P+ ++ + A+ +LS+ R + + + +F++ +G + R Sbjct: 171 -DQYIRVY-GKGSKERIVPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTLRGKSMDRIS 228 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I AG++ I PH LRHS L N G D R+IQD LGH NI T YT + Sbjct: 229 IWRSIKEYAQQAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVS 288 Query: 181 AGRFYGIWDRARGRQR 196 + + R + + Sbjct: 289 SAHLQEAFHRFHPKWK 304 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + + L+H E++ LL A R+ + L + G R SE+ L I+ + Sbjct: 103 KVWMRLPDTLSHEEMDQLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSINWQ 162 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTS-YPHAESEWVFLSRKGNPLSRQQ 120 + + + K P+ + ++ + +R A++ +FL++ G ++RQ Sbjct: 163 VGYL-VVQGKGNKERIVPIGQVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQG 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ ++ AGL ++HPH RHS L G D R +Q LGH +I T YT Sbjct: 222 FWKLVRKYAVKAGLQKKVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYTHVT 281 Query: 181 AGRFYGIWDRARGR 194 I + R Sbjct: 282 REHLKDIHKKYHPR 295 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + +L EIE +++A + P R+ + + + G R SE+C+L I D+D Sbjct: 107 TPRQWQTIPKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLD 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE-SEWVFLSRKGNPLSR 118 L+ + + K P+ V A++ +L R S ++F++ +G ++R Sbjct: 167 LEYQVLR-TTGKGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTR 225 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ +++ G AG+ + PH+LRHS L G D R +Q LGH +I T YT Sbjct: 226 QGFWKLLAAYGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTH 285 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ R Sbjct: 286 VMRSRLRATVEKHHPRA 302 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 13/198 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------TGPHAARNYCLTLLCFIHGFRASEICRL 54 K LT E++SL+ A R+ + + G R SE+ +L Sbjct: 133 PKRTKSLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKL 192 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 + DID + I + R K + N++ + + +SE++F+++ G Sbjct: 193 QKKDIDFDERTIRV-RGKGEKDRIVLFDENTRDLIDNYIETQ----NQKSEYLFINKNGR 247 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 L+ + +I AG+ ++ PH+LRHS L G+D R+IQ LGH ++ T Sbjct: 248 KLTPRYVQMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQ 307 Query: 175 WYTASNAGRFYGIWDRAR 192 YT + ++D AR Sbjct: 308 IYTNVDMDTIKSVYDHAR 325 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 3/187 (1%) Query: 9 KRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 + LT E++ LL + N RN + L + G R SE+ L+ SDI+L+ + Sbjct: 109 LPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCFLR 168 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 I K P NK + +L R + + +F+SR G LSR +F+ + Sbjct: 169 I-IGKGSKERLVPFGNKAKFFISIYLKKRRPCLNVN-DHIFISRLGKKLSRIEFWRQLKN 226 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 N G++ I PH LRHS L G D R +Q+ LGH +I T YT + R Sbjct: 227 IAKNVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLDEDRIVQQ 286 Query: 188 WDRARGR 194 + R Sbjct: 287 HKKFHPR 293 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 5/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K I +LL A + P R+ + L + G R SE+ L +SDID Sbjct: 112 PKKEQKAFKVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSELVGLNLSDIDF 171 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH---AESEWVFLSRKGNPLSR 118 I + R K P+ + ++ + ++L ++ + ++E +F+++ G+ L+ Sbjct: 172 GGMRILV-RGKGKKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTD 230 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I+ AGL ++ PH RHS L G D R IQ LGH ++ T YT Sbjct: 231 RSVRRIVEKYLKIAGLPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTH 290 Query: 179 SNAGRFYGIWDRARG 193 N ++D Sbjct: 291 LNLTELLRVYDATHP 305 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K + +IE LL AA+ RN + L + G R SE+ + ++ I+L Sbjct: 101 PKLWKKLPYVVPIHKIEDLLSAADVKTKLGIRNKAILELLYATGARVSEVATISLNGINL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHA-ESEWVFLSRKGNPLSRQ 119 + I K PL K A++ +L+ +R + S ++FLSR G PL R+ Sbjct: 161 EYGYIKCK-GKGSKERIVPLGKKASIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRE 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I+ AG++ I PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 NIWLIVKNCALKAGITEAISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHV 279 Query: 180 NAGRFYGIWDRARGRQ 195 N I + R Sbjct: 280 NKQHLKAIHQKFHPRA 295 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FLT E + L+ AAN G AR+ L L + G R SE+ L I DIDL Sbjct: 103 PKREKLLPKFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K P+ + ++ALK +LS R Y + +FL+R G L+ Sbjct: 163 NLGVVRVM-GKGSKERLVPITDLAIEALKEYLSTRGVY--NSGDPLFLNRLGGRLTGDGL 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 +++ A L+ ++ H LRHS + N G D R +Q+ LGH+++ T YT + Sbjct: 220 AYLVKNITIKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSL 279 Query: 182 GRFYGIWDRARGRQRH 197 R I+ + R + Sbjct: 280 DRLKKIYGQTHPRSKE 295 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 K D K +FL +E++++ A +T ARN + L + G RASE L++ DID Sbjct: 106 TPKLDKKLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDID 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSR 118 L + + K P+ + V+AL +L RT+ PHA+S+ +F++ +G L+ Sbjct: 166 LDLSTLLVMGKGK-KERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTD 224 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I++ +A L+ ++ PH++RH+ + N G D R +Q+ LGH +++ T YT Sbjct: 225 RGLRKILAKVIEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTH 284 Query: 179 SNAGRFYGIWDRARGRQRH 197 R ++ + R + Sbjct: 285 VTRDRLRDVYRHSHPRAKK 303 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 228 bits (582), Expect = 9e-59, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + L+ EIE ++ G P RN + + G R SE+ L+IS + Sbjct: 121 PKTKRQLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHF 180 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNW---LSIRTSYPHAESEWVFLSRKGNPLSR 118 A I + K P+ + V+ + + + + + + +FL+R+G+ L+R Sbjct: 181 DAGFIRV-VGKGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTR 239 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + +I AG+ ++ PH RHS L G D R +Q+ LGH +I T YT Sbjct: 240 VMIFLVIKELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTH 299 Query: 179 SNAGRFYGIWDRARGR 194 + R R Sbjct: 300 LDREYLRDTLQRFHPR 315 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 3/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K L+ E+ +L ++RN C+ L + G R SE+ L + D+++ Sbjct: 103 PKRDKKLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNI 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 K I + K P+ + + L+ ++ R + +F ++ G LSR++ Sbjct: 163 KMGFIKV-IGKGNKERMIPIGSYVGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREE 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FY I+ T + ++ ++ PH RH+ L G D R IQ+ LGH +I T YT + Sbjct: 222 FYSILQTIVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYTHIS 281 Query: 181 AGRFYGIWDRARGRQRH 197 + + + R + Sbjct: 282 NQKIRSEYQQFHPRIKK 298 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + FL+ ++ +LL+ + H RN + + + G R SE+ L+ +DL Sbjct: 101 PKAGTRLPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 A + + K P + Q WL + + S ++F++R GNP++RQ Sbjct: 161 VACFVRLF-GKGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ ++ AG+S+++ PH LRHS L G D R +Q LGH +I T YT Sbjct: 220 GFWKLLKKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHV 279 Query: 180 NAGRFYGIWDRARGR 194 + + + R Sbjct: 280 SRQYLVDMHKKYHPR 294 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D + +FL E++ L ++ + P RN + L + G R SE+C L+ SD+DL Sbjct: 104 PKQDKRIPSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDL 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE-----SEWVFLSRKGNPL 116 + +H K P + +AL +L A+ +VFL+++G PL Sbjct: 164 SMDTVLVH-GKGSKQRYVPFGSYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPL 222 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + I++ A +L IHPHMLRH+ L N G D R +Q+ LGH N+ T Y Sbjct: 223 TDRGVRFILTELMKKASGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQVY 282 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + + R Sbjct: 283 THVSKDSLRKTYMSHHPRA 301 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 7/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN---TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K +FL+ +E+++ LKA P RN + + + G R SE+ RL ++ + Sbjct: 102 PKLWRILPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAV 161 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSY--PHAESEWVFLSRKGNPL 116 D + + + K + P+ ++ L+ +L +R + S +VFLS+ G PL Sbjct: 162 DFDNELLRV-VGKGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNPRSPYVFLSKSGRPL 220 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +R+ ++++ + AG+ IHPH LRHS L G D R+IQ+ LGH +I T Y Sbjct: 221 NREWIWNVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADISTTEIY 280 Query: 177 TASNAGRFYGIWDRARGR 194 T ++ R I + R Sbjct: 281 THIDSNRLAAIHHKFHPR 298 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 4/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K N L+ +E E+LL A +T R+ + L + G R SE+ L + +D Sbjct: 101 RPKPQRKLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLD 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL--SIRTSYPHAESEWVFLSRKGNPLSR 118 + + + K P+ + + + + + +FLS +G ++R Sbjct: 161 EENGFVRV-IGKGNKERIVPMGEAATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+HI+ A + + PH +RH+ L N G D R +Q LGH +I T YT Sbjct: 220 HNFWHIVKRYAYEANIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTH 279 Query: 179 SNAGRFYGIWDRARGR 194 R + D+ R Sbjct: 280 VANARLKKLHDQLHPR 295 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 6/193 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K FLT E+ +LL + T RN + L + G R SE+ L + DID Sbjct: 109 PKLPRSIPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDR 168 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++ + + R K P+ ++ ++A+ ++ + E +FL+R + S Sbjct: 169 ESHLVRV-RGKGNRERLVPVGDRALKAVDDY----RTCIDGEFGALFLNRDAHRFSDSSI 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++S GL + + PH LRHS + + G D R IQ+ LGH ++ T YT Sbjct: 224 RRVLSVLVKACGLGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTHVTY 283 Query: 182 GRFYGIWDRARGR 194 R ++DRA R Sbjct: 284 ARLMEVYDRAHPR 296 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 3/198 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + T E+ +LL +T P RN + + G R SE+ +R+ DID Sbjct: 102 RPKYEVPLPKCFTEEEVRTLLSIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDID 161 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQ 119 LK + + K PL + ++A+ N+L +R + S + +FL++ G + Sbjct: 162 LKRGLVRVT-GKGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAFDTK 220 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q I+ + PH LRHS L + G D R IQ+ LGH + T YT Sbjct: 221 QLDIILKRYFELVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYTHI 280 Query: 180 NAGRFYGIWDRARGRQRH 197 + + + R + Sbjct: 281 SLEDIKEAYKKGHPRSKE 298 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 12/206 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-----TGPHAARNYCLTLLCFIHGFRASEICRLRI 56 + LT E+ +LL++ GP RN L L + G R SE L + Sbjct: 112 PPTPGRRLPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDV 171 Query: 57 SDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS------IRTSYPHAESEWVFLS 110 D+D +A+ + + + K G P+ VQAL +L R + +FL+ Sbjct: 172 DDVDTQARTV-LLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLN 230 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G LSRQ + ++ + +AG++ + PHMLRHS L G D R++Q+ +GH ++ Sbjct: 231 ARGGRLSRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASV 290 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQR 196 T YT +W A R + Sbjct: 291 TTTQIYTLVTVQALREVWAGAHPRAK 316 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 6/195 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K D K +FLT +E++ LL + P R+ + L + G R E+ L + +ID + Sbjct: 124 KKDKKVPSFLTENEMQMLLNLPDLKP---RDRAMIELFYSCGLRIEELVSLDLKNIDFIS 180 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES--EWVFLSRKGNPLSRQQF 121 + + K+ P+ + + A+K++++ R + VFLS + L ++ Sbjct: 181 NVVTVT-GKRNKERIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTA 239 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 I+ AG + ++ PH LRH+ + + G D R +Q+ LGH+N+ T YT Sbjct: 240 RRILHRYFVKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYTHVTI 299 Query: 182 GRFYGIWDRARGRQR 196 ++ R + Sbjct: 300 ESLKKVYKETHPRAK 314 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 6/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 KA + L+ +E+E+ L A + R+ L + + G RASE+C LR+ D+ Sbjct: 128 TQKAWQRMPGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCRASEVCTLRVRDLT 187 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS----IRTSYPHAESEWVFLSRKGNPL 116 L K + H K P+ + ++A++ +L I + + +FLSR G L Sbjct: 188 LDEKTLRCH-GKGDKQRMVPIGGRAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKAL 246 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 R Q + ++ AG+S EI PH LRHS L G D R +Q+ LGH +I+ T Y Sbjct: 247 DRIQLWRLVKRYAKRAGISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIY 306 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R + R Sbjct: 307 THVEHSRLQRVHRDFHPRA 325 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + + L+ EI LL R+ + L + G R SE+ + D+D Sbjct: 107 TPRTEKYIPAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGINEEDMD 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE------WVFLSRKGN 114 I I R K P+ +A++ ++ + + +F++R+ Sbjct: 167 FSQGLIRI-RGKGKKERIVPIGQPASEAVQRYMMKKPGSETSGKAVATCPVPLFVNRRQG 225 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LS + I+S +GL +I PH LRHS L + G D R IQ+ LGH ++ T Sbjct: 226 RLSARSVARILSKYVSMSGLQKQISPHTLRHSFATHLMDAGADLRSIQELLGHESLSTTQ 285 Query: 175 WYTASNAGRFYGIWDRARGRQR 196 YTA + R ++DRA + R Sbjct: 286 KYTAVSVNRLMAVYDRAHPKAR 307 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + L+ EI +L+++ A A RN L L + G R SE+ L + DI Sbjct: 162 PPAMPQHLPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDIT 221 Query: 61 --LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNP-L 116 + I + K P+ + QA+ +L R +S +FL+ +G + Sbjct: 222 ALEETDGILVLTGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAM 281 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 SRQ + ++ + AG++ +I PH LRHS L G D R +Q+ LGH ++ T Y Sbjct: 282 SRQSAWQVVKQAATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIY 341 Query: 177 TASNAGRFYGIWDRARGRQ 195 T A +W A R Sbjct: 342 THITADSLRAMWRTAHPRA 360 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + LT E+E LL + R+ + + + G + +E+ L I DI+L Sbjct: 99 PKIRRNFPDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINL 158 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 K I +K P+ + V+ L+ +L +RT +++F + +G+ ++RQ F Sbjct: 159 KLSYIKCRGIK-NKERIIPMGSYAVKCLEIYLKVRTKLNVQNIDYLFFNLQGDKMTRQGF 217 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II +G+ +I+ + LRHS L G D + IQ+ LGH ++ T Y+ Sbjct: 218 WKIIKQYAQESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMYR 277 Query: 182 G-RFYGIWDRARGRQ 195 R ++ + R Sbjct: 278 KTRIAEVYKKTHPRA 292 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 4/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ + L ++ LL A +N+ P A R+ + L + G R +E+ L + ID Sbjct: 105 PKSGKRLPKALDVDQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNLDSID 164 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQ 119 L + + K + P+ + A++ WL +R ++ +F+S+ G LS Sbjct: 165 LHESQLLVT-GKGNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPS 223 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + GL +HPH LRHS L D R +Q+ LGH ++ T YT Sbjct: 224 SVQQRLKRHALERGLDAHLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHL 283 Query: 180 NAGRFYGIWDRARGRQRH 197 + ++D A R + Sbjct: 284 DFQHLAQVYDGAHPRAQR 301 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +FL EI LL + T RN + L + G R SE+ L++S+ID Sbjct: 107 QKVAKRNPDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDF 166 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS---YPHAESEWVFLSRKGNPLSR 118 ++IH K P + + L ++ + +VF+++ GNPL+ Sbjct: 167 NQMVLFIH-GKGNKDRYVPFHDYAGEWLIKYIQEARENLMIKNEGHNFVFVNKFGNPLTN 225 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + +I+ + +IHPH +RHS L N G D R +Q+ LGH N+ T YT Sbjct: 226 RGVENIVDRIMRLYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIYTH 285 Query: 179 SNAGRFYGIWDRARGRQ 195 + ++ +A R Sbjct: 286 ISRDHLKEVYLKAHPRN 302 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 5/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ K N L +I +L A + P A R+ + L + G R +E+ L + DID Sbjct: 108 PKSPRKLPNSLDPDQISQVLNATITSDDPMAMRDKAMLELTYSCGLRLAELASLNVFDID 167 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 L + + K + P+ + + ALK+WL R ++ +F++ +G + + Sbjct: 168 LTDASLIVT-GKGNKTRQLPIGRQAITALKSWLQQRGQLKCHDANALFINHRGQRMGVRG 226 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G IHPHMLRHS L D R +Q+ LGH NI T YT + Sbjct: 227 IQMRMANMAATHG--QHIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLD 284 Query: 181 AGRFYGIWDRARGRQRHA 198 ++D+A R + Sbjct: 285 YQHLAKVYDKAHPRAQEK 302 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA---NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K F +E+E LL+AA + AR+ + + + G R +E+C + +S Sbjct: 99 PKKKQSLPTFAVPTEVEQLLEAASRQDDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSF 158 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 D +++ K P+ VQAL+ ++ +R +FLS+KGN ++ Sbjct: 159 DEVLSFVHVMGKGK-KERYVPIGQYAVQALQRYIELRKGVGLPTETALFLSQKGNRMTTD 217 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q +++ ++G+ + PH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 218 QIRYVMKRLRKDSGVHKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHV 277 Query: 180 NAGRFYGIWDRARGRQ 195 + R I+ R+ Sbjct: 278 STERLRSIYQATHPRK 293 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 226 bits (576), Expect = 4e-58, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 5/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 KA+ K FL+ E+ LL + + R+ + + G R SE+ + DI+ Sbjct: 101 TPKAEKKLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDIN 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQ 119 I + K+ + + ++ L+ + +R + FL+ KG +S + Sbjct: 161 WNYGEIRVF-GKRAKERIVIVGEETLKILQLYKDHVRPKLLKKPEKAFFLNAKGGRISDR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 II + + ++ PH LRH+ L G D R +Q+ LGH I T YT Sbjct: 220 AIRMIIKKYTKD--FNKKVSPHTLRHTFATHLLEGGADLRYVQELLGHVRISTTQIYTHL 277 Query: 180 NAGRFYGIWDRARGRQ 195 + + + + R Sbjct: 278 TSEQIRKTYTLSHPRA 293 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 6/198 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 K K +FL+ E++ L++ + AR+ + L + G R SE+ L DID Sbjct: 106 TPKLGRKLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDID 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + R K PL N ++A + +L +R + E + L+ +G LS + Sbjct: 166 AGSSLLRV-RGKGNKERIVPLTNYALEAARQYLEMRED----KQEALLLNYQGTRLSVRS 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I+ AGLS +HPHMLRHS L + G D R +Q+ LGH + T YT Sbjct: 221 IRRILDGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLT 280 Query: 181 AGRFYGIWDRARGRQRHA 198 R ++++ R + Sbjct: 281 KERLREVYEQNHPRAKKM 298 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ S+++ LL N P R+ + L + G R SE+ L + + L Sbjct: 106 PKLSRHLPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSL 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL--SIRTSYPHAESEWVFLSRKGNPLSRQ 119 + + I K G P+ + ++++L + H +S+ VF S++ ++RQ Sbjct: 166 RQGLVRI-IGKGGKERLVPMGEMAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQ 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+H I AG+ E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 225 TFWHRIKLYASRAGIETELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHV 284 Query: 180 NAGRFYGIWDRARGR 194 R + + R Sbjct: 285 ARARLQELHQQHHPR 299 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 1/196 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + I LL P R+ + L + G R E+ L DI L Sbjct: 123 PKQAKPLPKNIDVDAISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLG 182 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + K G P+ ++AL W + R A+ +F+S +G LS + Sbjct: 183 LQEVKVL-GKGGKERRVPVGKLAMEALALWHTQRLLLVQADEPALFVSNQGKRLSHRSIQ 241 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G N LS+ +HPH LRHS + D R +Q+ LGH N+ T YT+ + Sbjct: 242 ARMAKWGQNQALSVPVHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTSLDFQ 301 Query: 183 RFYGIWDRARGRQRHA 198 ++D A R + Sbjct: 302 HLAKVYDGAHPRAKKG 317 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 6/200 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + + + L+H+E+E LL T P R+ + + G R +E+ + D+DL Sbjct: 108 PRREKRLPGCLSHAEMEKLLSIPATTPLGLRDRAILETLYASGIRVAELVGMDQDDLDLV 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-----SIRTSYPHAESEWVFLSRKGNPLS 117 A + K PL V+AL+N+L + E +FL+ G L+ Sbjct: 168 AGYARVL-GKGRRERVVPLGRYAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLT 226 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + +S A L + PH +RH+ L G D R++Q+ LGH + T YT Sbjct: 227 TRGVRERLSHYVEKAALRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYT 286 Query: 178 ASNAGRFYGIWDRARGRQRH 197 + + ++ + R Sbjct: 287 HISQSQLREVYRQFHPRASR 306 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 225 bits (574), Expect = 9e-58, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K FL E+E L+ + + R+ + + G R SE+ L++ D+D Sbjct: 98 KPSKWEKLPVFLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMD 157 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 + + + + K P+ + +K +L IR + W+FLSR G L R Sbjct: 158 MHREIMKVT-GKGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDR 216 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + + II AG+ + PH LRHS L G D R IQ LGH ++ T YT Sbjct: 217 EYVWMIIKKYCERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYTQ 276 Query: 179 SNAGRFYGIWDRARGRQRH 197 + R R Sbjct: 277 VTDNKARNTLLNCHPRFRK 295 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 224 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 29/222 (13%) Query: 3 NKADNKKRNFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K + L+ SE+E ++ AA +T + R+ L + G R SE L+ D Sbjct: 115 PKQAEHLPDVLSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFED 174 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS------------------------ 94 IDL + + K P+ V+AL+++L+ Sbjct: 175 IDLTESVVRLS-GKGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSP 233 Query: 95 IRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANM 154 + +S A + +FL+++G LSRQ + IS +G A + E+HPH LRHS L + Sbjct: 234 LNSSSKSANTHVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISG 293 Query: 155 GIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 G D R +Q+ LGH ++ T YT + + + R R Sbjct: 294 GADVRTVQELLGHASVTTTQIYTHISPDALMEAYVMSHPRAR 335 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 224 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 7/192 (3%) Query: 9 KRNFLTHSEIESLLKAANTGPHA----ARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 L+ +E+ ++L++ A R+ L + + G R SE+ L + D+D K Sbjct: 113 IPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTEK 172 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 I I R K P+ + + AL+++L +R ++ S +FL+R G + RQ ++ Sbjct: 173 LI-IVRGKGSKERVVPVGDPALDALQHYLVRVRPAFNKKGSAALFLNRNGGRMGRQSAFN 231 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 ++S+ AG+ + PH RHS L G D R++Q+ LGH N+ T YT + Sbjct: 232 MVSSVSEKAGV-AGVSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYTKVSPDH 290 Query: 184 FYGIWDRARGRQ 195 W + R Sbjct: 291 LREAWSESHPRS 302 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 4/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K LT E +LL + + AR+ + + G R SE+ L + + Sbjct: 116 VTPKRKKTVAAHLTVDEAFALLDSILDDSLAGARDRAMFECLYSTGIRVSELAGLNMGRV 175 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIR--TSYPHAESEWVFLSRKGNPLS 117 + K + + K P+ K ++ +K + + + E VFL++ G L+ Sbjct: 176 NFSGKTLRVL-GKGDKERIVPVGAKALEHIKAYRDRLAVEGPKNPDPEAVFLNKNGGRLT 234 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ + GL+ + PH LRH+ + + G D R +Q+ LGH +I T YT Sbjct: 235 TRSIRRILEKIVRDMGLNRPLSPHGLRHTFATHMLDNGADLRSVQELLGHASISTTGRYT 294 Query: 178 ASNAGRFYGIWDRARGR 194 + R +D+A R Sbjct: 295 HVSIDRLMAAYDKAHPR 311 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K N LT EI+ +L P A R+ + + + G R +E+C + SDI Sbjct: 101 TPKIPRKLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTELCDFKTSDIL 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLS 117 ++ I + + K P+ + LKN+L+ + ++ VFLSR G L+ Sbjct: 161 WDSEMIRV-QGKGSKQRFVPIGPIARENLKNYLNHERNTLADKNPNVAEVFLSRNGRKLT 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R + ++ +A + E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 RMMIWVLLKKWTESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQVYT 279 Query: 178 ASNAGRFYGIWDRARGR 194 + + R Sbjct: 280 HLDKEHLKEVHRTYHPR 296 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 10/201 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L+ E+ +L + A R+ L + G R SE C L +SD+D++ Sbjct: 103 KVPSGIPKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDME 162 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--------VFLSRKGN 114 ++ + + K P + AL+ WL +W VFL +G Sbjct: 163 SQLVRLF-GKGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGT 221 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LSRQ + I+ A + E+ PH+LRHSC + G D R++Q+ LGH ++ T Sbjct: 222 RLSRQAAWRIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQ 281 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT + + ++ + R Sbjct: 282 VYTRVDNEVLFDMYKESHPRA 302 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 13/198 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAA--------RNYCLTLLCFIHGFRASEICRL 54 K L E++SL+ A + R+ + L + G R SE+ L Sbjct: 117 PKRTKSLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSL 176 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 RI+DID + I I R K L ++L R ESE++FL+R G+ Sbjct: 177 RINDIDPDERTIRI-RGKGDKDRIVLFDENTRDLLMDYLKRR----IHESEYLFLNRFGD 231 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 PL+ + +I AG+ ++ PH+LRHS L G+D R IQ LGH N+ T Sbjct: 232 PLTPRYVQMMIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQ 291 Query: 175 WYTASNAGRFYGIWDRAR 192 YT+ + ++DRAR Sbjct: 292 IYTSVDMQTLKNVYDRAR 309 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K FL+ E+E L+ A P R+ + + + G R E+ L + ++DL Sbjct: 101 TPKKERKLPEFLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQNLDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-----SEWVFLSRKGNP 115 + + + K PL + + A++++L + R + +FL++ G Sbjct: 161 QTGYLKVT-GKGNIERLAPLGSFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTR 219 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +S++ + + PH LRHS L G D R +Q+ LGH NI T Sbjct: 220 ISQRSIRRRVKKYVQQTASEHRVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQI 279 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT N R ++++ R Sbjct: 280 YTHVNQARMTEVYNKYHPRA 299 >UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV23_9GAMM Length = 345 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHA----ARNYCLTLLCFIHGFRASEICRLRIS 57 +A L + LL AA H R+ + L + G R E+ L +S Sbjct: 146 KRAPRPLPTLLDIDVLSQLLDQAAPEDSHEARLWIRDKAMLELLYGSGLRVGELVGLNMS 205 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRK-GNPL 116 DID + + + K G + P+ K QAL N+L R+ + + VF+S + G + Sbjct: 206 DIDKSQRLLRVL-GKGGKTRIVPIGEKAWQALINYLPHRSLWVEEQDPAVFVSERYGTRI 264 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 S + I AG++ +++PH+LRH + + D R +Q+ LGH +I T Y Sbjct: 265 STRTVQLRIKLQAKRAGVAQDLYPHLLRHCFASHILSDSGDLRGVQELLGHSDISTTQIY 324 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + G ++D+A R R Sbjct: 325 THLDFGHLSQVYDKAHPRSRR 345 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E+ LL A A R+ + L + G R SE + + D+ L Sbjct: 118 PQRWRTLPEVLSVDEVTRLLAAPGLDERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVML 177 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--VFLSRKGNPLSRQ 119 + + + K P+ + A+ +L +FL+ +G PLSR Sbjct: 178 EDSLVRVL-GKGNKERLVPIGRSAIGAVAVYLRELRPVLERGGGKGILFLNGRGAPLSRM 236 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ G AG+ + PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 237 GAWKLVRKYVGMAGIEKPVSPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQIYTHV 296 Query: 180 NAGRFYGIWDRARGRQ 195 + + + R Sbjct: 297 DREYLRSVHRQFHPRA 312 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 4/187 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ E+E L+ + +T P RN + + G R SE+ +++ +I+L Sbjct: 34 PKTGLSLPEVISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINL 93 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 +A I I K P+ + ++ ++NW+ + S ++F++R G P++RQ Sbjct: 94 EASFIRIF-GKGSKERIVPIGSFAIEKVRNWIMHGRPIILKNIPSHYLFVARAGKPMTRQ 152 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ ++ +G+S +I PH RHS L G D R +Q LGH +I T YT Sbjct: 153 GFWKLLKKYSRASGISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHV 212 Query: 180 NAGRFYG 186 + Sbjct: 213 SRDYLRK 219 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 3/196 (1%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K LT EI LL R + L + G R SE+ LRI ++ Sbjct: 96 LSPKLTQKIPETLTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVN 155 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--VFLSRKGNPLSR 118 LK K + + K P+ ++ V+ L+ +LS R Y + +F+++ G +SR Sbjct: 156 LKDKWV-LAYGKGAKQRFIPIHDRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISR 214 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ G AG+ +HPH+ RH+ L G D R +Q+ LGH +++ T YT Sbjct: 215 MSVWKDVNDLGRLAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYTH 274 Query: 179 SNAGRFYGIWDRARGR 194 + + R Sbjct: 275 LDVQSLKEKHKKFHPR 290 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + K FL E+ LL+ + + R+ L + G R SE+ L ++ +D Sbjct: 104 TPKLEKKLPVFLEEFEMNHLLELPDLSTELGQRDRALLEFLYSTGCRVSELVGLTLTRLD 163 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-----IRTSYPHAESEWVFLSRKGNP 115 L + + K PL + ++A+ +L+ + Y +++F++ +G P Sbjct: 164 LSNRYALLL-GKGHKERIVPLGHPCIRAMNAYLTGARRVLMEKYEVPSHDFIFVNHRGTP 222 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ + I+ A + + PH +RH+ L + G D R +Q+ LGH ++ T Sbjct: 223 LTARSVRRILDRYVEMASIQKHVSPHTIRHTFATHLLDHGADLRSVQELLGHASLSTTQI 282 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT A R ++ + R Sbjct: 283 YTHVTADRIASVYKKHHPRA 302 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA+ + + + +E+E LL + T P + R+ + L + G R SE+ L + D+ Sbjct: 102 PKAEKQLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQF 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K + P+ + ++ ++ R E+E +FL+ +G LSRQ Sbjct: 162 ELGYLQCE-GKGERARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQG 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ +I AG+ EI PH+LRHS L G D R IQ LGH ++ T YT N Sbjct: 221 FWKMIKRRAKLAGIEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVN 280 Query: 181 AGRFYGIWDRARGRQ 195 R + ++ + R Sbjct: 281 KSRLHDVYRKHHPRA 295 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 7/198 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN----TGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA K +T ++ SL+ PH AR+ + L + G R SE+ L + Sbjct: 109 TPKAPKKLPEVMTADQVNSLIDGVGGVELERPHPARDRAIFELLYGCGIRVSELAGLNLE 168 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLS 117 DID + + R K PL + Q+L+ +L+ R E VF++ + L+ Sbjct: 169 DIDRTEGWLRV-RGKGKKERQVPLPGQAAQSLERYLAERPV--AREQPAVFVNHRRARLT 225 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ IHPH RH+ L G D R IQ+ LGH + T YT Sbjct: 226 TRGISGIVKLYATYLSNDPGIHPHSFRHAYATHLLADGADLRAIQELLGHARLSTTQKYT 285 Query: 178 ASNAGRFYGIWDRARGRQ 195 + ++D+A + Sbjct: 286 QVSLTDLMAVYDKAHPKA 303 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI--D 60 K+ L+ + ++ P + R+ + L + G R E+ L I D Sbjct: 120 PKSARALPQVLSPDQAVRMVDLPTDAPDSIRDKAMFELFYSSGLRLMELIDLDAESIRSD 179 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + A + + K + PL + AL WL++R + + +F+ +G +S + Sbjct: 180 ITAGEVRVT-GKGHKTRIVPLGGCAISALHEWLAVRPTLANIGERALFVGARGARISPRV 238 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + G G++ +HPHMLRHS + D R +Q+ LGH +I T YT + Sbjct: 239 VQLRMKQWGIKQGITSSVHPHMLRHSFATHVLQSSGDLRAVQEMLGHASISTTQVYTHLD 298 Query: 181 AGRFYGIWDRARGRQRHA 198 I+D A R + Sbjct: 299 FQYLSKIYDAAHPRAKRK 316 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + + LT E+ LL + P RN + L + G R SE+ + + D++ Sbjct: 118 RIKLGVQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLN 177 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L + I +H K P ++ + +L +SE +FL+ +G +SR Sbjct: 178 LTERVILVH-GKGSKQRYVPYVDTLDELFAKYLKQSRPILLKLKQSELLFLNNRGERMSR 236 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+ I+ + A + E+ PH RHS L G++ R++Q LGH +I T YT Sbjct: 237 MGFWKILRKAVLEANIKKEVTPHTFRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTH 296 Query: 179 SNAGRFYGIWDRARGRQ 195 + R + R Sbjct: 297 IDMKRLVETYKEYHPRA 313 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 2/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + LT E+ ++L + + R+ + L + G R SE+C LR D D Sbjct: 123 PKLARNLPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDA 182 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 +A + + K P+ + + +L +FL+R G LSRQ Sbjct: 183 QAGVVRVF-GKGAKERIVPVHHVSCALVTAYLRDWRPAFSPVEPAMFLNRSGKGLSRQAV 241 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + ++ AG+ +I PH RHS L G D R +Q LGH +I T YT A Sbjct: 242 WKVVKRHVAEAGIHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQA 301 Query: 182 GRFYGIWDRARGRQRHA 198 R I + R R Sbjct: 302 DRLRRIHNAHHPRTRRP 318 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 6/197 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ + L+ SE+ LL GP R+ L + G RASE+ L + D+ Sbjct: 111 PKVPDRLPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFF 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS---IRTSYPHAESEWVFLSRKGNPLSR 118 + + K P+ + L ++L + + P V L+ +G LSR Sbjct: 171 AEGILRVM-GKGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSR 229 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ T+G G ++HPH LRHS + G D R IQ+ LGH +I T Y Sbjct: 230 QALHTIVRTAGATIG-RPDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYVH 288 Query: 179 SNAGRFYGIWDRARGRQ 195 + + A R Sbjct: 289 VDRSHIREEYLAAHPRA 305 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + K FL EI LL+ + T R+ + + G R SE+ L ++ +D Sbjct: 113 TPKLEKKLPVFLEEFEINLLLRMPDCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVD 172 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT-----SYPHAESEWVFLSRKGNP 115 L + I K PL + V A++++L Y + VF++ +G P Sbjct: 173 LGNRYA-ILLGKGRKERLVPLGHPCVAAMEDYLRHSRGTLMEKYQAPRHQTVFVNSRGRP 231 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+ L + PH +RH+ L + G D R +Q+ LGH ++ T Sbjct: 232 LSARSVRRILDKYVEMTALQKHVSPHTIRHTFATHLLDHGADLRAVQELLGHVSLSTTQI 291 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT A R ++++ R Sbjct: 292 YTHVTAERLTAVYEKHHPRA 311 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 4/191 (2%) Query: 7 NKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 ++LT EIE L + + R+ C+ L + G R SE C LR++D+DL+ Sbjct: 108 RSIPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMT 167 Query: 66 IYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQFYH 123 + + K G P K + L +L + E++F+S+KG+ ++R+ + Sbjct: 168 LTVE-GKGGRQRLVPFGEKSLDILNRYLKQSRPFILKSRNCEYLFVSKKGSYINRKSVWR 226 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 +++ + ++ PH LRHS L D + +Q+ LGH +I T YT Sbjct: 227 LLNHYIKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYTHMANKT 286 Query: 184 FYGIWDRARGR 194 + + R Sbjct: 287 LREVHKKFHPR 297 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K LT +++ LL A ++G P AR+ + L + G + SE+ L I DI L Sbjct: 101 PKPERKPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPH-AESEWVFLSRKGNPLSRQ 119 + + + G P+ +++ ++ +R A + +FL+ G L+RQ Sbjct: 161 EMRFLRCAVSG-GKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II G AG+ +I PH LRHS L G D R +Q+ LGH + T Y S Sbjct: 220 GFWKIIKKYGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMY-QS 278 Query: 180 NAGRFYGIWDRARGRQ 195 ++D R Sbjct: 279 AKKSMKEVYDHYHPRS 294 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 27/220 (12%) Query: 2 KNKADNKKRNFLTHSEIESLL------------------KAANTGPHA------ARNYCL 37 K + + L+ I L+ KA ++ RN + Sbjct: 103 TPKLEQHLPHVLSEGSISKLMGEGGDRDKEGPKPGKSSKKAGDSDSEGKDKGLLMRNMAM 162 Query: 38 TLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT 97 + + G R SE+ L++SDI + + + R K P+ ++ L+N+L Sbjct: 163 IEVLYGCGLRVSELVGLKVSDIIFETRTLRC-RGKGNKERIVPIGEYALEVLQNYLEHDR 221 Query: 98 SYPHAE--SEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMG 155 + +E +FL+ +G L+RQ + I+ G+ I+PH RHS L + G Sbjct: 222 ERLRGKHKTEVLFLNSRGTALTRQGIWDILKKWAQTHGVQENIYPHKFRHSFATHLLDHG 281 Query: 156 IDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 D R +Q+ LGH +I T YT + R ++ +A R Sbjct: 282 ADLRSVQEMLGHADIATTQIYTHLSRQRLLEVFRKAHPRA 321 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 84/197 (42%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA NK L+ E+ L+ A P R+ L + G R SE C L +S + L Sbjct: 107 PKAVNKLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCRVSEACDLELSSLHL 166 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLSR 118 + + K PL + + AL WL A + VF++++G+ LSR Sbjct: 167 DQGLV-VLTGKGSKQRMVPLGDCALVALLAWLEEGRPELVARAPREAHVFVNKRGSRLSR 225 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + +AG++ +I PH LRHS L G D R +Q LGH +I T YT Sbjct: 226 QGCFFRLRQHAVSAGITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTH 285 Query: 179 SNAGRFYGIWDRARGRQ 195 + +D R Sbjct: 286 LSQSHVRHAYDLHHPRA 302 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLL--KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ +K + L+ E LL ++ A R+ + L + G R +E+ +L+ +DID Sbjct: 121 PKSPHKLPHALSPDEAAQLLTFNPSSNDMLATRDLAIFELFYSSGLRLTELTQLQPTDID 180 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K + P+ ++AL+ WL +R+++ +FLS++G + + Sbjct: 181 FTGGTVRVT-GKGNKTRIVPVGELALRALQAWLPLRSAWLIPGETALFLSQRGRRIHPRT 239 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + L +HPH LRHS L D R +Q+ LGH +IR T YT + Sbjct: 240 IAYRLHQRAQLQNLDSRVHPHTLRHSFASHLLQSSGDLRAVQEMLGHSSIRSTQVYTHLD 299 Query: 181 AGRFYGIWDRARGRQRHA 198 I+D+A R R Sbjct: 300 FQHLAKIYDQAHPRARKK 317 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 1 MKNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 M + LT E+ LL+A A P R+ + L + G RASE+C L + D+ Sbjct: 104 MLPDKPSPMPAILTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDL 163 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 DL + + + R K PL+ + AL+ +L +R ++ +F +G P R+ Sbjct: 164 DLSSGTVRV-RGKGDKVRVLPLVGETRSALERYLKVRGTHQGP----IFQGDRGGPFRRE 218 Query: 120 QFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + +I G A ++ +HPH+LRHSC L G+D R +Q LGH ++R T YT Sbjct: 219 MLWKMIQRRGRQACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTH 278 Query: 179 SNAGRFYGIWDRARGRQR 196 + ++DR+ R + Sbjct: 279 FDLE-LRDVYDRSHPRAQ 295 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 ++ FLT EIE LL+A P R+ + L + G R SE+ L++ Sbjct: 109 PSIQSRLPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLESYYP 168 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESE-WVFLSRKGNPLSRQ 119 + I + K P+ +AL +++ RT ++ VFL+++G PL+R Sbjct: 169 EHFQIKVL-GKGNKERAVPIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRS 227 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + +I G+ +++PH+LRH+ L G D R+IQ+ LGH NI T YT Sbjct: 228 RIRQLIIHYARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHV 287 Query: 180 NAGRFYGIWDRARGRQ 195 N I R R Sbjct: 288 NLKHLKEIHRRCHPRS 303 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K + L+ EIE +L A + + P RN + + G R SE+ L+IS++ Sbjct: 104 PKLGRKLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFF 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSR 118 + + K P+ + + + + + +VFL+R+GN LSR Sbjct: 164 DDGFVKVL-GKGNKERLVPIGRDARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSR 222 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + II GL + PH RHS L G D R +Q+ LGH +I T YT Sbjct: 223 VMVFTIIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTH 282 Query: 179 SNAGRFYGIWDRARGRQ 195 + I R Sbjct: 283 LDRDYLQQIIKDFHPRS 299 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L E+ ++L + R+ + L + G R SE+C L + DID Sbjct: 103 PKLPKTLPKVLPVEEVFAILDMPDVKTVLGLRDRAILELLYGGGLRISELCGLDLLDIDR 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS-----YPHAESEWVFLSRKGNPL 116 + + + K P+ + ++AL+ +L+ R E +FL+ +G L Sbjct: 163 SGRIVRVM-GKGSKERLVPVNAQSIRALEAYLARRGELLATIRKDQAPEAMFLNFRGGRL 221 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + + T L+ ++ PH +RHS L G D R IQ+ LGH ++ T Y Sbjct: 222 TPRSIARHLDTYVLKCALTRKVSPHAMRHSFATHLLGGGADIRSIQELLGHSSLSTTQRY 281 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + ++D A R Sbjct: 282 TQVTWEQLQQVYDSAHPRA 300 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 5/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 + K L + ++ A+ R+ + L + G R +E+C + +SD Sbjct: 115 ISPKITRDLPKILGEQQAGDFVENAASTNEEEFLRDSAILELLYATGMRVAELCGIDLSD 174 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 ID K + + K P +AL+NWL +R + + +F+ +G ++ Sbjct: 175 IDYDRKMVRVL-GKGNKERVVPFGESAHKALRNWLDVRDEMTE-DPKALFVGVRGQRINA 232 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +Q I+ + G+ + PH LRH+ L + G D R +Q+ LGH +++ T YT Sbjct: 233 RQVRRIVDRAAKVTGVD-HLSPHSLRHTAATHLLDGGADLRQVQELLGHSSMQTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQ 195 + R +++A R Sbjct: 292 VSNKRLLEAFNKAHPRA 308 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + + +I+ LL A + P+ R+ L + + G RASE+ LR+ D+ L Sbjct: 95 QKIWRRIPSVIAPHKIDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLRMDDVHL 154 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA----ESEWVFLSRKGNPLS 117 + K PL K + +K +L ++ ++FLSR G LS Sbjct: 155 DEGYVKCE-GKGSKQRIAPLAQKSARVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLS 213 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R + ++ AG+ ++ PH LRHS L G D R +Q+ +GH +I T YT Sbjct: 214 RIAIWELVKKYAARAGIDPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYT 273 Query: 178 ASNAGRFYGIWDRARGRQ 195 + R + + R Sbjct: 274 HVDQSRLKKVHAQYHPRA 291 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K ++ S++E+LL A + R+ + L + G R SE+ L + I Sbjct: 101 RTKIRRHLPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIA 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLSR 118 L + I K P + L+ ++ R + S++VF+S++G LSR Sbjct: 161 LDVGYVQIL-GKGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSR 219 Query: 119 QQFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 Q F++ + GL +I PH LRH+ L G D R IQ LGH ++ T YT Sbjct: 220 QAFWYRLKVYVCAVGLDSNKISPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 HIADQRLKSLFMKHHPRA 297 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIES-LLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FL E+E LL P R+ + L + G R SE L + D Sbjct: 105 PKQKTRLPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWDR 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESE--WVFLSRKGNPLSR 118 ++ + + K P+ V A+++++ R A +FL+ +G LS Sbjct: 165 VSETVRVF-GKGRKERYVPVGKMAVSAVESYIHEARPKLLRANDPTSHLFLNYRGGALSD 223 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I+ A + +I PH +RHS L N G D R +Q+ LGH++++ T YT Sbjct: 224 RSIRKIVEKRLDEAAMQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTH 283 Query: 179 SNAGRFYGIWDRARGRQ 195 + R Y ++ A R Sbjct: 284 VSKERLYAVYKGAHPRA 300 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 5/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLL--KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 + K L + + AA+T R+ + L + G R SE+C L + D Sbjct: 117 VSPKVTRNLPRVLGEVQAGEFMGSAAADTEDEFRRDSAILELLYATGMRVSELCGLDLGD 176 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 +D + + + K P AL+ WL R E + +F+ +G + Sbjct: 177 VDHHRRMVRVL-GKGDKERMIPFGKAAADALEQWLEARDRMAKVE-DAMFVGVRGGRIDA 234 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +Q I+ + AG + PH LRH+ L + G D R +Q+ LGH +++ T YT Sbjct: 235 RQIRRIVDRTAQVAGAD-HLSPHSLRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTH 293 Query: 179 SNAGRFYGIWDRARGRQ 195 ++ R + +A R Sbjct: 294 VSSQRLLEAFRQAHPRA 310 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 1/196 (0%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + +IE LL + + + L + G R SE C L + + L Sbjct: 113 TKKAVQHLPVYFNMQDIERLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + K P+ + +AL+N+L+ +A S +VF++ KG ++RQ Sbjct: 173 EQGFLRV-IGKGNKERMVPMHARCKKALENYLTKVRKQRYARSNFVFINAKGQEITRQYI 231 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + +I GL + H RHS L + G D R++Q+ LGH +I T YT Sbjct: 232 HVMIKKRLLALGLDERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTTQIYTHVQN 291 Query: 182 GRFYGIWDRARGRQRH 197 R ++ R + Sbjct: 292 KRLQSVYTSFHPRAKK 307 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 7/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 + K + LT E+ +LL A T R+ + + G R SE+ L Sbjct: 106 QPKLARYLPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELLGLSRL 165 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 ++ + + + K P+ + +K +L +R A S + +FL+ +G P Sbjct: 166 NLHMDDGFVRVF-GKGSKERLVPVGQTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGP 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LSR ++I+ AG+ I PH RHS L G D R++Q+ LGH +I T Sbjct: 225 LSRMAAWNIVREHAVIAGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQI 284 Query: 176 YTASNAGRFYGIWDRARGR 194 YT + + R Sbjct: 285 YTHIDRSFIKEVHKTFHPR 303 >UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWI0_9PROT Length = 299 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 4/193 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + ++ ++E LL A T P R+ C+ L + G R SE+ L ++ Sbjct: 106 KLRKSRPLPKMMSEHDVERLLAAPETEDPVGLRDRCMLELLYATGVRVSELVSLTRGQVE 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + A + + K P + Q L+ WL +R + P S ++F R G+ ++RQ Sbjct: 166 MDAGLLRV-IGKGDKERLIPFGEEAGQWLQQWLLLRPAKPA--SPYLFAGRGGHAMTRQN 222 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ I AG+ PH LRH+ L N G D R +Q LGH ++ T YT + Sbjct: 223 FWLRIKRYATMAGIMPLPSPHTLRHAFATHLLNHGADLRAVQMLLGHAHVTTTEIYTHVS 282 Query: 181 AGRFYGIWDRARG 193 R + + + + Sbjct: 283 RARMHDLVNHSHP 295 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+H E++ LL A + R+ + L + G R SE+ L+++D++L Sbjct: 120 PRPGRRLPGLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + + + + R K P+ A+K +L++ S+ +F++ +G ++RQ Sbjct: 180 ETRVL-VARGKGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQ 238 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F I+ AG+ I PH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 239 GFAKILDRCARRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHV 298 Query: 180 NAGRFYGIWDRARGRQ 195 + ++DR R Sbjct: 299 DRTHVKRLYDRFHPRA 314 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 9/203 (4%) Query: 3 NKADNKKRNFLTHSEIESLLK-----AANTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 ++ + + LL R+ + L + G R E+ L I Sbjct: 141 KRSPRPLPSIADVDLLTQLLDQEIPDTPEQARLWLRDKAMFELLYSSGLRVGELVALDIV 200 Query: 58 DIDLKAKCIYIHRLKKGFS-TTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRK-GNP 115 D+DL + + KG PL K A++ +L R + + +F+S K G Sbjct: 201 DVDLAD--LRVRVTGKGNKTRLVPLGIKAADAIRRYLPHRNLWVEQMDQALFISEKLGTR 258 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + + + AG++ ++PH+LRH + + D R +Q+ LGH +I T Sbjct: 259 LSTRAVQQRLKVAATRAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQI 318 Query: 176 YTASNAGRFYGIWDRARGRQRHA 198 YT + + ++DRA R H Sbjct: 319 YTHVDFAKLTQVYDRAHPRATHV 341 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 3/191 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + +FL + EIE+LL + + RN + L + G R SE+ L+I D+DL Sbjct: 100 KRQGRHLPHFLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLT 159 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPH-AESEWVFLSRKGNPLSRQQ 120 + + + K V L ++L++ R +P+ +++E VFL+++G PL+ + Sbjct: 160 ERSLRV-IGKGNKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRG 218 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 HI+ G AGL +++HPHMLRHS L + G R++Q LGH ++ T YT + Sbjct: 219 IQHILEHQGKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVS 278 Query: 181 AGRFYGIWDRA 191 + ++D A Sbjct: 279 MQKIKEVYDDA 289 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 2/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + N L+ E+ LL + T R+ + L + G R SE+ + + D D Sbjct: 105 PKLPSLLPNILSQDEMLRLLTTPDITNKLGFRDKVILELLYASGIRVSELIGVHVLDFDQ 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 I + K G PL + ++ L +++ +++FL+R G L+RQ Sbjct: 165 DKGIIKVF-GKGGKERYIPLHSSAMKLLIHYVQKIRPMFTPIEKFLFLNRSGKGLTRQAI 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II A ++ I PH RH+ L G D R +Q LGH ++ T YT + Sbjct: 224 WKIIKRYALLASINKSISPHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHVQS 283 Query: 182 GRFYGIWDRARGRQ 195 R I R Sbjct: 284 DRLKYIHSMFHPRS 297 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA-ARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + F E+E+L K R+ + L + G R SE+ ++ DID Sbjct: 100 PKKEKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDF 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A + + K P Q+++N+L +++ L+ KG ++ + Sbjct: 160 YANGVTVL-GKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLILNMKGEAITERGV 218 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++++ EIHPH LRH+ L N G D R +Q LGH N+ T YT + Sbjct: 219 RYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSN 278 Query: 182 GRFYGIWDRARGRQRH 197 + ++ A R + Sbjct: 279 QQLRKVYLNAHPRAKK 294 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-----HAARNYCLTLLCFIHGFRASEICRLRIS 57 + + + +L R+ + L + G R +E+ L I Sbjct: 107 KRQPRPLPGMIDIETVNQILDQPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIK 166 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNP 115 DID + + I K + P K ++L NWL I + ++ VF+S++G Sbjct: 167 DIDFNRQLVRIT-GKGNKTRIVPFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGA 225 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ +Q + AG+++++HPH+LRH + + D R +Q+ LGH N+ T Sbjct: 226 LTPRQIEKRVKLQAQRAGVNVDLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQI 285 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT + ++D+A R Sbjct: 286 YTHIDFDHLAQVYDQAHPRA 305 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K L+ E+E+LL + +TG R+ + L + G R SE+ L++S+++L Sbjct: 98 PKGVRKLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNL 157 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 A + + K P+ A +L S +FLSR G +SRQ Sbjct: 158 SAGYL-MTIGKGDKERLVPMGESACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQ 216 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F++II AG+ I PH LRHS L G D R +Q LGH ++ T YT Sbjct: 217 AFWNIIKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHV 276 Query: 180 NAGRFYGIWDRARGR 194 R + R Sbjct: 277 TRERMKKLHADFHPR 291 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 19/210 (9%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-----------NTGPHAA----RNYCLTLLCFIHGFR 47 K + + FLT ++ LL A P +A R+ + + G R Sbjct: 130 PKMEKRLPKFLTAQQMVELLGAPLKPLATPKKKGPGRPISATVCYRDVAILETIYSCGLR 189 Query: 48 ASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWV 107 SE+C L DID + + + R K P+ + A++N+ S P S V Sbjct: 190 ISELCGLTAQDIDWNEQLVRV-RGKGKKERQVPIGEPALTAIRNYWSTLEQSPGGGSP-V 247 Query: 108 FLSR--KGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 FL K LS + + AGL + PH LRHS + + G D R +Q+ L Sbjct: 248 FLGETEKAAALSPRVLQQRLKKYLALAGLDPSLTPHKLRHSYATHMLDAGADLRSVQELL 307 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YT + R +D A R Sbjct: 308 GHAHLITTQVYTHVSTERLKRAYDSAHPRA 337 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI-- 59 K+ + L+ + +L++ R+ + L + G R SE+ L + + Sbjct: 117 PKSPKRLPKALSVEQAVALMEQLPGDDAETIRDRAVNELFYSCGLRLSELVSLDMRHVKA 176 Query: 60 ---------DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-----E 105 DL+A+ + + K T P+ K +AL WL++R +++ Sbjct: 177 GAYESASWLDLEAREVQVL-GKGSKRRTVPVGTKATEALAAWLAVRAQLAKSDAAPEDAH 235 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 +FLS +G L+++Q + + AG+ ++HPH+LRHS + D R +Q+ L Sbjct: 236 ALFLSPRGKRLAQRQIQLRMKRNAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELL 295 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 GH +I T YT+ + I+D+A R + Sbjct: 296 GHASIASTQVYTSLDFQHLAKIYDQAHPRAKKK 328 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +FL+ E++ LL + P N + L + G R SE+C L ++ + L Sbjct: 101 RKNETYLPSFLSVEEVKQLLNSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + I K P+ N+ V+ L +L+ IR + ++ F++ GN ++ + Sbjct: 161 ETGILRIL-GKGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNRITARS 219 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G +I PH LRH+ L G D R+IQ+ LGH NI+ T YT Sbjct: 220 IQLLLKQKAMECGFQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTTEIYTHVQ 279 Query: 181 AGRFYGIWDRARGRQRHA 198 + + + + Sbjct: 280 NRQLFEAYQNFHPLSKKK 297 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 5/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ ++E ++KA N + RN C+ + + G R SE+ L+IS+I+ Sbjct: 105 PKLGLYLPDTLSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINF 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE--SEWVFLSRKGNPLSR 118 K + + K S PL + +K ++ IR+ Y + + +FL+ +G+ +SR Sbjct: 165 KELYLKV-DGKGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSR 223 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + II AG++ +I PH RHS L G D R IQ+ LGH +I T YT Sbjct: 224 VIVFIIIKELTEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYTH 283 Query: 179 SNAGRFYGIWDRARGRQR 196 + R + Sbjct: 284 LKNEELRDVILNFHPRNK 301 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-----HAARNYCLTLLCFIHGFRASEICRLRIS 57 + + + +L A R+ + L + G R +E+ L I Sbjct: 110 KRQPRPLPGMVDIETVHQILDQAPPDKPIEQQLWLRDKAILELLYSSGLRLAELQGLMIK 169 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNP 115 DID + + I K + P K +L WL I + VF+S++GN Sbjct: 170 DIDFNRQLLRIT-GKGNKTRIVPFGQKAKDSLIEWLKIYRIWQGEFNLDSAVFISQRGNR 228 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ +Q + + AG+++++HPH+LRH + + D R +Q+ LGH N+ T Sbjct: 229 LTPRQIENRVKLQAQRAGVNVDLHPHLLRHCFASHMLSASGDLRSVQEMLGHSNLSTTQI 288 Query: 176 YTASNAGRFYGIWDRARGRQRH 197 YT + + ++D+ R + Sbjct: 289 YTHVDFDQLARVYDQTHPRAQK 310 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 218 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ +LT ++ LL N P R+ + L + G R +E+ L I ++ + Sbjct: 102 PKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSV 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNW-LSIRTSYPHAES-EWVFLSRKGNPLSRQ 119 + + + K P+ + ++ + L R + +S + VF S++ ++RQ Sbjct: 162 QQGVVRV-IGKGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQ 220 Query: 120 QFYHIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+H + A + + + PH+LRH+ L N G D R++Q LGH ++ T YT Sbjct: 221 TFWHRVKHYAILADIDADALSPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTH 280 Query: 179 SNAGRFYGIWDRARGR 194 R + +R R Sbjct: 281 VAKERLKRLHERFHPR 296 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 218 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + L + +L P A R++ L L + G R SEI L D+ Sbjct: 137 PPKQPQRIPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDV 196 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 L +++ K PL K +ALKN+L +R + ++ + +F R G LS++ Sbjct: 197 YLDEAWVHVT-GKGRKQRQVPLTGKSAEALKNYLPLRQT--ASDGKALFTGRNGTRLSQR 253 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q ++ G + PHM+RHS L D R +Q+ LGH ++ T YT Sbjct: 254 QIQKRLAQWAAINGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKL 313 Query: 180 NAGRFYGIWDRARGRQRH 197 + ++D A R + Sbjct: 314 DFDHIARLYDEAHPRAKR 331 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 3/194 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +LT EI+S+ ++A G + R+ L L + G R SE +++S IDL Sbjct: 103 TPKLGHYLPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + + K PL +K + L+ W+ H ++ + L+ G P+SR Sbjct: 163 ENEWL-MPIGKGNKQRLVPLGSKAKENLRAWIEEGRPLTHPTTDNIILNAHGKPMSRMGA 221 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + I+ + LS ++ PH RHS G+D R++Q+ LGH +I T YT + Sbjct: 222 WKIVQLHTMH--LSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDK 279 Query: 182 GRFYGIWDRARGRQ 195 R+ Sbjct: 280 DFIKQEHRSFHPRE 293 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 6/193 (3%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 F EIE + + + RN L + + G R SE+ L + +DL I Sbjct: 108 LPEFFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIIL 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTS----YPHAESEWVFLSRKGNPLSRQQFYH 123 + K P+ + AL+ +L E +VF++ G+PL+ + Sbjct: 168 V-IGKGSKERYVPIGDFARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGVRY 226 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I+ +GL+L+IHPHMLRH+ L N G D R +Q+ LGH ++ T YT Sbjct: 227 ILEKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYTHVTKEA 286 Query: 184 FYGIWDRARGRQR 196 + R + Sbjct: 287 LQQNYQLYFPRSK 299 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 9/202 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT----GPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K + + L+ E+ +++AA + R+ L + G R SE ++ D Sbjct: 119 PKQADYLPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFED 178 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWV---FLSRKGN 114 IDL + + K P+ V+AL+N++ R + FL+++G+ Sbjct: 179 IDLNESVVKLT-GKGSKQRLVPIGGCAVRALRNYMEKSRPELALKGKRELHTIFLNKRGS 237 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LSRQ + I++ +G A L +HPH LRHS L G D R +Q+ LGH ++ T Sbjct: 238 ALSRQSAWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQ 297 Query: 175 WYTASNAGRFYGIWDRARGRQR 196 YT + + + R + Sbjct: 298 IYTHISPDALVEAYVMSHPRAK 319 >UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ8_PROMH Length = 188 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 138/182 (75%) Query: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 K+R FLT E+ ++LK A G + R+YC+ L+CF+HGFR SE+C L +SDIDL+++ +Y Sbjct: 2 KQRKFLTRFEVNAILKQAKEGRYPERDYCMFLMCFLHGFRVSELCNLTLSDIDLESRILY 61 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + RLK G STT P++++E +AL NWL R ++ ++SEWVFLS+K P+SRQQ Y ++ Sbjct: 62 VRRLKGGLSTTQPIIDEEYEALCNWLKSRENWRESDSEWVFLSQKTGPISRQQVYGLLRR 121 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 G A +S+ HPHMLRH+CG+ALA++G DTRLIQDYLGHRNI HTV YTASN+ RF + Sbjct: 122 LGKKANVSISPHPHMLRHACGYALADLGRDTRLIQDYLGHRNISHTVIYTASNSKRFINM 181 Query: 188 WD 189 W+ Sbjct: 182 WE 183 >UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMU3_CLOPH Length = 291 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + +LT ++ SLL A + R+ + L + G + SEI L+ DI+ Sbjct: 100 PPKVEIAPPRYLTKEQVLSLLSAPDSNTKRGLRDKAMLELMYATGMKVSEIGGLKKEDIN 159 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 LK C+ + LKK P +L+ +L+ ES ++FL R+G P++RQ Sbjct: 160 LKFGCVTVRELKKN--RVVPFGQAARASLEAYLASEDDV-RKESPYLFLGRQGEPMTRQG 216 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I+ G GL ++ P +R+S + G D +++ +GH NI T YT Sbjct: 217 VWKIMKYYGKQIGLEEDLTPQAIRNSFAIHMIENGADLNSMKELMGHANITATQHYTKQR 276 Query: 181 AGRFYGIWDRARGRQ 195 G +G + + R Sbjct: 277 IGETFGTYHKTHPRA 291 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 6/195 (3%) Query: 8 KKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + + L+ ++ +LL GP RN C L + G RASE+ L D L + Sbjct: 122 RLPDVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGIL 181 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRKGNPLSRQQFYH 123 I K P+ + L ++L P + V L+ +G LSRQ + Sbjct: 182 RI-VGKGSRERIVPIGGSAARCLASYLEDARPLLRSPRRLTPAVMLNARGGRLSRQSIHS 240 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I+ +G G+ ++HPH LRHS L G D R IQ+ LGH +I T YT + Sbjct: 241 IVREAGHVIGI-KDLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTHVDRTH 299 Query: 184 FYGIWDRARGRQRHA 198 + A R + A Sbjct: 300 VREEYLSAHPRAKAA 314 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 1/197 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K L LL+ R+ + + + G R SE+ L +S Sbjct: 120 PKQPKALPKSLDVDLTRQLLEQPLKTWQDVRDQAIFEILYSGGLRVSELVELDLSPGLDG 179 Query: 63 AKCIYIHRLKKGFSTTH-PLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++ L KG P+ +AL WL IR+ Y + VF++R G L + Sbjct: 180 LASGWVRVLGKGQKERDAPVGQPAQKALHRWLEIRSDYAQPGEQAVFVNRFGKRLGVRSI 239 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + AGL ++ PH LRH+C + D R +Q+ LGH N+ T YT + Sbjct: 240 QTQLDKRTLQAGLPTKMSPHRLRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLDL 299 Query: 182 GRFYGIWDRARGRQRHA 198 ++D+A R + Sbjct: 300 QHLATVYDKAHPRAKKK 316 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 3/193 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L + L++ P R+ L + + G R SE L + +DL Sbjct: 110 PKLPKVHPKVLNVDQAIHLVETEITLDPEGLRDLALLEVLYGSGLRVSEALGLDFAHVDL 169 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQ 120 K + + K PL + L ++ R ++ P A + VFL ++G LSR+Q Sbjct: 170 DQKLVRVL-GKGRKERLVPLTGPAAERLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQ 228 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I+ +G I PH LRHS + G D R +Q+ LGH I T YT + Sbjct: 229 ADRIVKEMAVRSGAPCSISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHLD 288 Query: 181 AGRFYGIWDRARG 193 + ++D A Sbjct: 289 LAQVMRVYDAAHP 301 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 6/196 (3%) Query: 3 NKADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +E+E LL A A RN+ + L + G R SE+ +L ++ ++ Sbjct: 162 PKIGRALPKVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN 221 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSR 118 +A + I K P QA+ +++ S+++F++ +G ++R Sbjct: 222 -QAGHLRIL-GKGSKERLVPFGEAARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTR 279 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +F+ I+ S G++ EI PH+LRHS L G D R +Q LGH +I T YT Sbjct: 280 LRFWQIVRKSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTH 339 Query: 179 SNAGRFYGIWDRARGR 194 + R I + R Sbjct: 340 VDTNRLKAIHRKFHPR 355 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%) Query: 5 ADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 F E+ L + A R+ L + + G R SE+ L + ++L+ Sbjct: 132 KKKTLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSELSLERLNLE 191 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I + K PL + QA++++LS +R S ++ L+ KG P+S +Q Sbjct: 192 VQLIRVL-GKGNKERIVPLGDSATQAIRDYLSHLRPKIDRNNSPYLLLTDKGAPMSPRQI 250 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + + ++L+I+PH LRHS L N G D R +Q+ LGH N+ T YT Sbjct: 251 RTRLKSLVEEQAMNLKIYPHKLRHSFATHLLNKGADLRTVQELLGHANLSSTQIYTHVTK 310 Query: 182 GRFYGIWDRARGRQRHA 198 + + +A R + A Sbjct: 311 DQLRSQYLKAHPRAKQA 327 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 17/208 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAAR---------------NYCLTLLCFIHGFR 47 + + + L E +LL +A TGP R + L L + G R Sbjct: 165 PRQEKRHPRALNVDETFALLDSA-TGPGGKRGPVAGSAEEERILCRDLALAELLYGSGLR 223 Query: 48 ASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWV 107 SE L + D+ L ++ + + K PL + LK WL R + + Sbjct: 224 ISEALSLDVDDVQLSSRVLRVM-GKGSRERLAPLSDTSFSCLKAWLEERPLLALPDEAAL 282 Query: 108 FLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGH 167 F+ +G L+R++ I+ AGL+ + PH LRHS L G D R +Q+ LGH Sbjct: 283 FVGARGARLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHLLEAGADMRSVQELLGH 342 Query: 168 RNIRHTVWYTASNAGRFYGIWDRARGRQ 195 + + T YT + +D+A R Sbjct: 343 QRLTTTQRYTQVSLESLMQTYDQAHPRS 370 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 2/194 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L + +L++ R+ L + + G R SE L + DIDL Sbjct: 102 PPKKSARLPRTLPPEQTAALMQ-PTHASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + K PL L WL R + VFL+R G L+ + Sbjct: 161 HSCELRVL-GKGSKQRIVPLPTTAADLLGQWLDERLLGLVRDERAVFLNRFGQRLTARSV 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ T +G + + PH LRHS L G+D R IQ+ LGH ++ T YT + Sbjct: 220 QRMLKTRALESGADISVTPHRLRHSFATHLLAGGVDLRAIQELLGHASLATTERYTHLDI 279 Query: 182 GRFYGIWDRARGRQ 195 + ++DR+ R Sbjct: 280 AKLTEVYDRSHPRA 293 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 11/205 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISD- 58 K+ + LT S+I S++ A P AR+ + L + G R SE+ + ++D Sbjct: 103 PQKSARRLPKALTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDL 162 Query: 59 --IDLKAKCIYIH--RLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES---EWVFLS 110 ID + R K PL + +A++N+L +R S +FL+ Sbjct: 163 SSIDTSDGKVTTLKLRGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLN 222 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G+ +SRQ + ++ + AG++ + PH+ RHS L N G D R++Q+ LGH ++ Sbjct: 223 SRGSRISRQSAWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASV 282 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQ 195 T YT + + R Sbjct: 283 TTTQIYTLITIDKVRESYALTHPRA 307 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D + +L E+ +L+ A R+ L + G R SE L I D+DL Sbjct: 103 PKRDRRLPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A + K G + + V AL+ +L +R A VF++R+G L+ + Sbjct: 163 SAGFARVL-GKGGRERYVMVGRRAVDALRRYLPLRDRM--ARCSAVFINRRGGRLTDRSV 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ IH H LRHS + N G D R +Q+ LGH ++ T YT ++ Sbjct: 220 RRVLERRIQEVPGLRSIHVHGLRHSFATHMLNGGADLRSVQELLGHASLSSTQIYTHTSR 279 Query: 182 GRFYGIWDRARGRQRHA 198 + + A R R Sbjct: 280 EQLARAYYAAHPRARRG 296 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 10/201 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------TGPHAARNYCLTLLCFIHGFRASEICRL 54 K + + FLT ++ LL A R+ + L + G R SE+ L Sbjct: 126 PKLEKRLPKFLTEEQMVRLLAGPQQLLASESIDAFTAHRDRLVLELLYGAGLRVSELTGL 185 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 IDL+A I K P+ V L+ + A V ++++G Sbjct: 186 NYGAIDLEAGVARI-VGKGRKERLCPIGRVAVAVLRKFRDEFAP-ATAPDAPVIVTQRGT 243 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 +S ++ ++ A L +++ PH LRHS L N G D RL+Q+ LGH + T Sbjct: 244 RMSPREVQLMLKRYLALAELPMDLTPHKLRHSYATHLLNAGADLRLVQELLGHAQLATTQ 303 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT + R I+ +A R Sbjct: 304 VYTHVSVARLKEIYAKAHPRA 324 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E++ + + + + P RN + + F G R SE+ L++S++ L Sbjct: 107 PRLGEHLPEVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYL 166 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT--SYPHAESEWVFLSRKGNPLSRQ 119 I + K P+ K ++ L W R E ++VFL+R+G L+R Sbjct: 167 DEGFIRVT-GKGNKERLVPISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRT 225 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 ++ AG+ I PH LRHS L G D R IQ LGH +I T YT Sbjct: 226 MILIMLKRQAQEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYTHI 285 Query: 180 NAGRFYGIWDRARGRQ 195 + R Sbjct: 286 DTTTLREEILLHHPRN 301 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 5/194 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + LT +I L + R+ + + G R+SE+ L I+L Sbjct: 111 PKFEKELPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLSELMINL 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNK-EVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQ 119 + + + + L KG ++ + + ++S R Y + VF++ +G ++ + Sbjct: 171 EEREVRV--LGKGNKERVTFFSENARKWYEKYISAKRNEYKNYTPNIVFVNSRGERITTR 228 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +I+ AG++ E+ PH+ RHS L N +D R +Q+ LGH +I T YT Sbjct: 229 SLRRLIADYAEKAGINKEVTPHVFRHSFATTLLNNKVDIRYLQELLGHSSISTTQVYTHV 288 Query: 180 NAGRFYGIWDRARG 193 + I+ +A Sbjct: 289 SKALLREIYIKAHP 302 >UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae RepID=XERC_NEIMF Length = 305 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + L + +L P A R++ L L + G R SEI L D+ Sbjct: 108 PPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDV 167 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 L +++ K PL K V+ALKN+L +R + ++ + +F R G LS++ Sbjct: 168 YLDEAWVHVT-GKGRKQRQVPLTGKSVEALKNYLPLRQT--ASDGKALFTGRNGTRLSQR 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q ++ G + PHM+RHS L D R +Q+ LGH ++ T YT Sbjct: 225 QIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKL 284 Query: 180 NAGRFYGIWDRARGRQRH 197 + ++D A R + Sbjct: 285 DFDHIARLYDEAHPRAKR 302 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + F +E+++L + A P RN L + + G R SE L +SDID Sbjct: 105 KKKNLRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDF 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP----HAESEWVFLSRKGNPLS 117 ++ + IH K PL + AL+ + H E + VF++ G P++ Sbjct: 165 DSEVMLIH-GKGNKERYAPLGSFAQDALQEYFREGRQVLMTKYHEEHDIVFVNHHGKPIT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 ++++ + L +IHPHMLRH+ L N G D R +Q+ LGH N+ T Y Sbjct: 224 PTGIEYVLNQMIKKSSLDSDIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQIYA 283 Query: 178 ASNAGRFYGIWDRARGRQ 195 + R Sbjct: 284 HVTKESLQKNYRSFHPRA 301 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 16/212 (7%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + ++ +I+ LL + RN + + G R SE+ I D+ Sbjct: 224 PPKNVKRLPKAVSVEDIQRLLAVPDRETATGLRNRAILEFLYATGARVSEMLNADIDDVH 283 Query: 61 LKAKC-----------IYIHRLKKGFS-TTHPLLNKEVQALKNWL-SIRTSYPH--AESE 105 + Y+ KG P+ + +A++++L R S + Sbjct: 284 FEGTLTDEDGNQITLPGYVRLFGKGNKERLVPIGSYAQKAIQDYLVRARPSLVAHGKGTA 343 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 +F++ +G L RQ + I+ + AGLS + PH +RHS L G D R++Q+ L Sbjct: 344 ALFVNGRGGRLGRQGAWLILKEAAEAAGLSSDFSPHSMRHSFATHLLQGGADIRVVQELL 403 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQRH 197 GH +I T YT ++ A R Sbjct: 404 GHASIATTQVYTKVTPEGLMEVYRMAHPRAHE 435 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 4/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + L+ +++E+LL A G R+ + L + G R SE+ L+ ++ Sbjct: 145 LSAKQPARFPATLSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEV 204 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLS 117 L + + K P ++ +L R + A S+ +F++ +G ++ Sbjct: 205 GLNDGVVRVM-GKGSKERLVPFGEVAHGWIERYLREARPALLGARTSDALFVTARGEGMT 263 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQQF++II A + + PH LRH+ L N G D R++Q LGH +I T YT Sbjct: 264 RQQFWNIIKRHAMRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYT 323 Query: 178 ASNAGRFYGIWDRARGR 194 R + R Sbjct: 324 HVARERLRTLHAAHHPR 340 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 3/193 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + LT EI+ ++ A +T R+ + + + G R SE+ LR+ D+ Sbjct: 107 TPKFGRHLPDILTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLF 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 I + K P+ + ++ +L R + A S+ VFL+ +G L+R Sbjct: 167 FGEGYIRVT-GKGDKQRLVPVSGAAREKIQRYLDDRATKTSA-SDVVFLNNRGTQLTRVM 224 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I+ + AG+ I PH RHS L G R +Q+ LGH +I T YT Sbjct: 225 VFTILREAVHRAGIDKHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYTHLE 284 Query: 181 AGRFYGIWDRARG 193 ++ Sbjct: 285 GDHLRDTVEKYLP 297 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 20/214 (9%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-----------------GPHAARNYCLTLLCFIH 44 KAD ++ ++I+ L KA AAR+ + + + Sbjct: 102 PIKADQPLPLVMSINQIDLLTKAVGEYWEMAAANGISKSDEAAEFAAARDLAMVEVIYSG 161 Query: 45 GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HA 102 G R SE L + DIDL + R K L +AL+N+ +R++ A Sbjct: 162 GLRISETTGLDMGDIDLIGGIARV-RGKGKKERIAVLGRPSQKALRNYFKLRSTVGGGRA 220 Query: 103 ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQ 162 VFL++ G L+ + F + A L ++ PH LRHS L + G D R +Q Sbjct: 221 PGSPVFLNKFGKRLTPRSFQRNLKNYLIAANLPPDLTPHKLRHSFATHLLDAGADLRSVQ 280 Query: 163 DYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 + LGH N+ T YT +A R ++ A R + Sbjct: 281 EMLGHENLSTTQIYTHVSAERMKEVYKEAHPRAK 314 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 2/183 (1%) Query: 9 KRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 + T EIE ++ P R + + L + G R SE L ++ +DL+ + I Sbjct: 107 LPVYCTRDEIEKIMAQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGMLRI 166 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 K P+ + ++ ++ ++ +R Y + W+F++R G + +I + Sbjct: 167 W-GKGNKERLVPMPKQTIKIVREYVDTVRPLYQKKPTSWLFITRLGKKTTTASIESMIKS 225 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 AG+ I PH LRH+ + G D R +Q+ LGH +I T YT + R Sbjct: 226 VCIQAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIYTHIDRSRLRTA 285 Query: 188 WDR 190 +D Sbjct: 286 YDE 288 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 11/205 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAA-------RNYCLTLLCFIHGFRASEICRLR 55 K K +FL ++ LL + N G A RN+ L + G R SE+ + Sbjct: 120 PKLGTKIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGVRVSELAGMD 179 Query: 56 ISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRK 112 SD+D + + K P+ K + A+K +L + S +F + + Sbjct: 180 ESDVDFHEGMVRVL-GKGSKERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNAR 238 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G L+ + + ++ GL + PH LRH+ L N G D R IQ+ LGH N+ Sbjct: 239 GRRLTTRSVHRLLRMELRRCGLWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLST 298 Query: 173 TVWYTASNAGRFYGIWDRARGRQRH 197 T YT + + ++D A R R Sbjct: 299 TQRYTHVHVDQLMKVYDAAHPRSRR 323 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 7/202 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K +K +F E+ L +A G RN + + + G R SE L+ SDID Sbjct: 101 KKQSDKLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDID 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT----SYPHAESEWVFLSRKGNPL 116 + I + K P +AL+N+ S +VF++ P+ Sbjct: 161 FSMQTILVL-GKGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHNFVFINHYAKPI 219 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + +I++ + L+ +IHPHMLRHS AL N G D R +Q+ LGH ++ T Y Sbjct: 220 TTTGIEYILNQVITASSLNGKIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQIY 279 Query: 177 TASNAGRFYGIWDRARGRQRHA 198 T + + + R A Sbjct: 280 THVTKEKLQESYRKYFPRSTDA 301 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 6/197 (3%) Query: 5 ADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 ++ K FL +E+ L+AA RN L L + G R EI L S ID Sbjct: 107 SNKKLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFEITNLTFSQIDFN 166 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA---ESEWVFLSRKGNPLSRQ 119 ++ + I K P + +LK +L R + ++F++ +G L+ Sbjct: 167 SQIVDITGKGK-KQRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLTET 225 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +I+ + L+ IHPHMLRHS L N G D R +Q+ LGH ++ T YT Sbjct: 226 GAEYILKQVSKRSKLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYTHI 285 Query: 180 NAGRFYGIWDRARGRQR 196 + + R + Sbjct: 286 TTENLQENYKKFFDRAK 302 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L+ +++E+LL A + T P R+ + L + G R +E+ L+ ++ + Sbjct: 116 KQPLRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMN 175 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQQ 120 + I K G + P + ++ +L + +F++ +G ++RQ Sbjct: 176 EGVLRIT-GKGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQM 234 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ +I A ++ + PH LRH+ L N G D R++Q LGH +I T YT Sbjct: 235 FWTLIKKHAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVA 294 Query: 181 AGRFYGIWDRARGR 194 R + R Sbjct: 295 RERLKHLHQIHHPR 308 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 4/191 (2%) Query: 8 KKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 K +T EI+ L+ + + + RN + + G R SE+C L++S++ + I Sbjct: 111 KLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETLYSCGLRVSELCNLKLSELYFEEGFI 170 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQQFYHI 124 + K P+ + ++ ++ + + R ++VF+S G +SR +HI Sbjct: 171 KVE-GKGSKQRLVPISPRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRIMVFHI 229 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 I GL +I PH RHS L G + R IQ LGH +I T YT + Sbjct: 230 IKELAARIGLKKKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHIDRNML 289 Query: 185 YGIWDRARGRQ 195 R Sbjct: 290 RSEIIEHHPRN 300 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 212 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + LT +E++ LL N R+ + L + G R SEIC L+I DI + Sbjct: 95 RLKRVLPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFE 154 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQ 120 K + I K P+ ++ + L+ ++ ++ +FL+ +G+ +SR Sbjct: 155 GKYLKI-CGKGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVG 213 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I+ + + + I+PH LRHS L G D R +Q LGH +I T YT + Sbjct: 214 IWKIVKEAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVD 273 Query: 181 AGRFYGIWDRARGRQ-RHA 198 + + + +HA Sbjct: 274 SAHLKKQIAK-HPKHSKHA 291 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 212 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 5/179 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K + L+ E+ LL P R+ + L + G R SE+ L + I++ Sbjct: 101 PKIEKKAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINM 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSY-PHAESEWVFLSRKGNPLSRQ 119 I G T P +AL ++L R ES+W+F++ G +SRQ Sbjct: 161 TIGFITCSDS--GRERTIPFGRVAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+ II G AG+ +I PH LRHS L + G D + +Q LGH ++ T Y A Sbjct: 219 GFWKIIKYYGEKAGIQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYAA 277 >UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX Length = 199 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 92/182 (50%), Positives = 121/182 (66%) Query: 9 KRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 KR +L+ E+ LLKAA ++ R+YC+ + FIHG R SE+ L++ D D + + I Sbjct: 2 KRKYLSEKEVHCLLKAAAENQYSVRDYCMISMAFIHGLRVSELVNLKVDDYDSLSAQLNI 61 Query: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTS 128 RLK GF T PLL E + L+ WL R ++ ES W+FLS+ G PLSRQ+F+ ++ Sbjct: 62 KRLKNGFCTIQPLLPDENELLQCWLDERKTWDGHESCWLFLSKNGGPLSRQRFWQLLRKY 121 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G A L++++HPHMLRH+CGF LA G DTRLIQDYLGHRNIRHTV YTASN RF W Sbjct: 122 GDEAHLTIKVHPHMLRHACGFNLAERGNDTRLIQDYLGHRNIRHTVHYTASNPERFRNAW 181 Query: 189 DR 190 + Sbjct: 182 TK 183 >UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family n=8 Tax=Escherichia coli RepID=B1LMF8_ECOSM Length = 209 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 140/191 (73%), Gaps = 3/191 (1%) Query: 10 RNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 R FLTH EI LL++ ++R+ C+ LL + HG R SE+ L++SD++L + IYI Sbjct: 4 RKFLTHHEINLLLQSVRQKSCSSRDVCMILLAYFHGLRVSELLSLQLSDLELTTEKIYIQ 63 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA---ESEWVFLSRKGNPLSRQQFYHIIS 126 R+K GFST HPL +EV A+ NWL+ R S ++ W+F+SR G PLSRQ+FY+I+S Sbjct: 64 RIKNGFSTVHPLQKEEVIAITNWLNERNSLNVKHFNDNPWLFVSRTGKPLSRQRFYNIVS 123 Query: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 +G NAGL++++HPHMLRH+CG++LA+ G+DTRLIQDYLGHRNIRHTV YTASN+ RF Sbjct: 124 AAGKNAGLNIKVHPHMLRHACGYSLADNGVDTRLIQDYLGHRNIRHTVIYTASNSMRFEK 183 Query: 187 IWDRARGRQRH 197 +W R +++H Sbjct: 184 MWGRGDAKKQH 194 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K++ K +T ++I++LL A + H R+ L + + G R +E +L +SDIDL Sbjct: 100 PKSERKLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDL 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 I K PL + ++ + + + VF+S+K + +SRQ Sbjct: 160 HRGSIR-TIGKGDKLRLVPLGQEAAYWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I+ AG+ + PH LRH+ L N G+D R +Q LGH +I T YT Sbjct: 219 LAWMIVKEYAEAAGI-ASLSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIYTHV 277 Query: 180 NAGRFYGIWDRARGRQ 195 R + D R Sbjct: 278 ANIRLKNMVDEHHSRS 293 >UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECJ8_9ACTN Length = 220 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 11/202 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT ++E+LLK +T P R+ + L + G R SE+ L + I Sbjct: 18 PKLPRDLPGVLTTQQVEALLKTPDTSTPAGLRDAAMLELLYASGARISELAALNVESIGW 77 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI---------RTSYPHAESEWVFLSRK 112 + + + K PL + ++A + ++ + P + +S + Sbjct: 78 SERTLRLW-GKGSKERIVPLYRRALEATRLYIEEGRPELLAQAKRRDPATGPHPLLISAR 136 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 GN +S T AG+ +I PH +RH+ L G D R +Q+ LGH ++ Sbjct: 137 GNRMSAAMLRRRFHTLATLAGIPADIAPHAMRHTFATDLLEGGADLRSVQELLGHASLST 196 Query: 173 TVWYTASNAGRFYGIWDRARGR 194 T YT R +A R Sbjct: 197 TQIYTHLTPDRLKRAVAQAHPR 218 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 12/201 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAA--------RNYCLTLLCFIHGFRASEICRL 54 + FLT +++ LL+ A R+ + L + G R SE+ L Sbjct: 104 PRRKKTLPVFLTLNQMLELLELPYKTAVPANAPAWLPYRDAAILELFYSCGMRLSELVGL 163 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 + +D + + + + K P+ + AL+ ++S+ ++ +F+SR G Sbjct: 164 DVGSVDHRFRGVKVM-GKGRKERILPVGTPALAALETYVSMAC---LPKNSPLFVSRIGT 219 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LS + +++ + + I PH +RH+ + G D R +Q+ LGH ++ T Sbjct: 220 RLSARSVQMMLNKYVKLSSIPFTISPHKIRHTFATHILEAGADLRSVQELLGHASLSTTQ 279 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT R ++ +A R Sbjct: 280 IYTHVTRARMAEVYRQAHPRA 300 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K LT ++E LL R+ L + G R SE + +S + Sbjct: 15 PKIPETLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSS--FE 72 Query: 63 AKCIYIHRLKKGFSTT-HPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++ ++ L KG P+ +A++ WL R + ++ +F+++ G +S + Sbjct: 73 SELSFVKVLGKGKKERMLPVGKFAKEAIEKWLVERE-HIAKDTNALFINKYGKRISIRAM 131 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 I GLS + PHMLRHS + D R IQ+ LGH ++ T YT N Sbjct: 132 QERIYNISIAQGLS-PVSPHMLRHSFATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNF 190 Query: 182 GRFYGIWDRARGRQRH 197 + I+DR+ + Sbjct: 191 QQLAKIYDRSHPHGKK 206 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 4/193 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +L+ E + L++AA++ R Y + + G R E+C L+ISD+DL Sbjct: 94 PPKRPSHMPVYLSEDEAKRLIEAASSDT---RMYAIVSVLAYTGVRVGELCNLKISDVDL 150 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I + K + + V+AL ++L +R S +++++F+S + Sbjct: 151 QESIINVRSGKGDKDRIVIMAEECVKALGSYLDLRLS-MDTDNDYLFVSNRRVRFDTSTI 209 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 +I G AG+ ++ PH+LRH+ ++ G D R IQ LGH ++ T YT N Sbjct: 210 ERMIRDLGKKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLND 269 Query: 182 GRFYGIWDRARGR 194 ++ + R R Sbjct: 270 SALREMYTQHRPR 282 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 8/199 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAA------NTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 K + L + +L A + PH AR+ + + + G R E+C L + Sbjct: 118 KVPKRLPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLG 177 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPL 116 D+D + + + K T P+ ++A+ WL R + S + +FL +G + Sbjct: 178 DVDRSRRTVKVT-GKGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRI 236 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 ++ ++ T S ++ PH LRH+ L G D R +QD LGH ++ T Y Sbjct: 237 DQRVVRRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIY 296 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + R + +A R Sbjct: 297 THVSTERLRTAFRQAHPRA 315 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 212 bits (540), Expect = 8e-54, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + D K + L+ EIE LL + + P ARN + + + G R +E+ L+IS++ Sbjct: 103 TPRIDRKIPDVLSLQEIEDLLAVIDLSTPEGARNRAMIEVLYSSGLRVTELIELKISNLY 162 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHA--ESEWVFLSRKGNPLS 117 L + I K P+ + + L +++ IR++ P ++VFL+R+G +S Sbjct: 163 LDIGFLRI-IGKANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKIS 221 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R + II A + I PH RHS L G + + +Q+ LGH NI T Y Sbjct: 222 RVMVFMIIKEVALLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIYK 281 Query: 178 ASNAGRFYGIWDRARGRQ 195 + R Sbjct: 282 RLDQDILRQTLLEFHPRS 299 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 13/204 (6%) Query: 3 NKADNKKRNFLTHSEIESLLK-----AANTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 + D L + +L A P A R+ + + G R SE+CRL I Sbjct: 126 PRPDKTLPRVLAADQTAEILHNLEVGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIG 185 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE------SEWVFLSR 111 D+D + + I K P ALK W+ I A E VFL + Sbjct: 186 DLDFARQTVTIL-GKGNKQRVVPFGESAAHALKRWIDIGRPAIAANGHHKDADEAVFLGK 244 Query: 112 KGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIR 171 +G + +Q ++ + ++ PH LRHS + G D R++Q+ LGH ++ Sbjct: 245 RGGRIDPRQVRTVVHQATSTVS-GGDVSPHALRHSAATDVLEGGADLRVVQEMLGHASLA 303 Query: 172 HTVWYTASNAGRFYGIWDRARGRQ 195 T YT ++ R ++++A R Sbjct: 304 TTQIYTHVDSERLKAVFNQAHPRA 327 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L+ + LL A P R+ L L + G RASE+ + + D+ Sbjct: 116 TTKTAATIPDVLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCRASEVSVMEVRDLR 175 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-----EWVFLSRKGNP 115 ++ + + R K PL + + A++ +L A+S W+ LS +G Sbjct: 176 IEDRF-CLARGKGSKERLVPLGDPALAAVEAYLEHERPKLAAKSKQGVPPWLLLSSRGQR 234 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+RQ+ + ++ G + PH LRHS L + G D R +Q+ LGH +I T Sbjct: 235 LTRQKIWELVKQYALRCGAPASMSPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQI 294 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT + R I + R Sbjct: 295 YTHVDQSRLKKIHSQFHPRA 314 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 8/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 +A + +T S++ LL++ + R+ + G R SE+ LR+ +DL Sbjct: 106 PRAPRNLPHTMTDSDVNRLLESCDVSTAAGLRDRAFLEFLYATGARISEVATLRLEQVDL 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE-----SEWVFLSRKGNP 115 + + + K PL ++ LK +L R + + +F+S +GN Sbjct: 166 QNGTVRLF-GKGSKERIVPLYESAIEWLKKYLRSSRPTLLLKDKTGRVHSALFISVRGNN 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +S + S+ AGL + PH +RH+ L G D R++Q+ LGH ++ T Sbjct: 225 MSADSLRKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQV 284 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT + R A R + Sbjct: 285 YTHLSVDRLKEAAKAAHPRSK 305 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA----------------ARNYCLTLLCFIHGF 46 KA + + + +LL + P + R+ L L + G Sbjct: 107 PKAPKRLPRAPSVEQTLNLLDKSTPRPLSPEASDFDTSAWAVLRSLRDTALLELLYSAGL 166 Query: 47 RASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE- 105 R SE C L +D+DL+ + + K G PL V A++ WL RT Sbjct: 167 RISEACNLDRADVDLRGGELRVRHGKGGKQRMVPLGRTAVAAIEAWLQARTRAKPQLDPM 226 Query: 106 -WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDY 164 +F + G L+ ++ ++ L + PH LRH+ L G D R IQ+ Sbjct: 227 GPIFTGQLGKRLNSREGQRLLEKWRARLDLPESVTPHALRHAFATHLLQAGADLRAIQEM 286 Query: 165 LGHRNIRHTVWYTASNAGRFYGIWDRARGRQRH 197 +GH ++ T YT + ++D A R + Sbjct: 287 MGHASLSATQKYTHLDMQALAKVYDAAHPRAQR 319 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 85/225 (37%), Gaps = 35/225 (15%) Query: 7 NKKRNFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + L I LL AA GP R+ L L + G R SE+ L + DIDL Sbjct: 129 RRLPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLG 188 Query: 63 AKCI----------------------YIHRLKKG-FSTTHPLLNKEVQALKNWL------ 93 + + KG P+ + ++AL+ +L Sbjct: 189 PGRLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPV 248 Query: 94 -SIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLE-IHPHMLRHSCGFAL 151 + +FL+ +G LSRQ + +++ + AGL + PH LRHS L Sbjct: 249 LAAAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHL 308 Query: 152 ANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 G D R +Q+ LGH ++ T YT ++ A R R Sbjct: 309 LEGGADVRSVQELLGHASVTTTQIYTLVTVDALREVYVTAHPRAR 353 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D L +LL AR+ + L + G R SE L + D+D Sbjct: 97 PKRDKLLPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALNLDDVDF 156 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I R K G P+ + + L+ WL R++ + +FL R G+ L +Q Sbjct: 157 SDSLLRI-RGKGGKERLVPIGAEAMLRLRTWLGERSA--GMDEPALFLGRHGHRLGGRQV 213 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + G +HPHMLRHS + D R +Q+ LGH N+ T YTA + Sbjct: 214 EKRLRDWAIKTGAGQHVHPHMLRHSFASHMLQSSGDLRAVQELLGHANLSSTQIYTALDF 273 Query: 182 GRFYGIWDRARGRQRH 197 ++D A R R Sbjct: 274 QHLAKVYDGAHPRARK 289 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D +T +I LL A +T PH R+ L L + G R SE RL ++D Sbjct: 114 PPKIDKNIPTLITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFGNLD 173 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPLSR 118 L CI K P+ + V ++ + R S + +F+S+K +SR Sbjct: 174 LDRGCIT-TLGKGNKQRIVPMGRESVYWVERYYKEARPLLLKGRSCDALFVSQKKTGISR 232 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 233 QLAWMIVKEYASQAGIE-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQ 195 R + + R Sbjct: 292 VANVRLHSVVKEHHSRN 308 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 16/209 (7%) Query: 1 MKNKADNKKRNFLTHSEIESLLK------------AANTGPHAARNYCLTLLCFIHGFRA 48 M K + L+ S+ E L+ + RN + + + G R Sbjct: 100 MTPKIPDTLPAVLSESQAEKLMDCVDEQMPKSRTKSVRKQAVGLRNAAMLEVLYATGIRV 159 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EW 106 +E+ L + D+ + + + K P Q+++ WL R A S + Sbjct: 160 AELVGLDVHDVAFDNRTMKVT-GKGNKQRVVPFGVPAEQSIRRWLEDGRPRLVRARSADA 218 Query: 107 VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLG 166 +FL +GN + ++ ++ AG+ +I PH LRHS L + G D R +Q+ LG Sbjct: 219 LFLGAQGNRIDQRVVRQVVHECAQRAGVP-DISPHALRHSAATHLLDGGADLRQVQELLG 277 Query: 167 HRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 H +++ T YT + + + +A R Sbjct: 278 HSSLKTTQRYTHVSIEQLKARYGQAFPRA 306 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-----GPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA L + L AAN+ P A R+ + + + G R SE+C L I Sbjct: 102 PKARRTLPAVLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDID 161 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 D+D + + + K T P QAL+ WL S R + AES + L +G Sbjct: 162 DVDTSRRLLRVL-GKGDKQRTVPFGEPAEQALRAWLTSGRPALATAESGPALLLGARGRR 220 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L +Q ++ + G + +I PH LRHS L G D R++Q+ LGH + T Sbjct: 221 LDPRQARTVVHETVGAVAGAPDIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLATTQL 280 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT R + D+A R Sbjct: 281 YTHVTVARLRAVHDQAHPRA 300 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + + L P R+ + L + G R +E+ + I D+ Sbjct: 101 PKKAKRLPKNIDVDSLNHFLDQMPEDEPIEVRDKAMMELLYSSGIRLAELSAMDIDDLSF 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQ 120 + + + K P N + L WL R ++ +++ + +FLS++GN L+ + Sbjct: 161 SDQSLRVL-GKGNKVREVPFGNSSKKVLSLWLKERNNFAKNSDEKALFLSQQGNRLTNRA 219 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G GL+ +HPH LRHSC + D R +Q+ LGH +I T YT + Sbjct: 220 IQQRLAHWGKKLGLNDRLHPHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLD 279 Query: 181 AGRFYGIWDRARGRQRHA 198 +D A R R Sbjct: 280 FQHLAKTYDAAHPRARKK 297 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 9/178 (5%) Query: 27 TGPHAARNYCLTLLCFIHGFRASEICRLRISDID---LKAKCIYIHRLKKGFSTTHPLLN 83 P R+ + + + G R E C L + DID L + + + R K G PL Sbjct: 184 REPLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKGGKERIVPLGR 243 Query: 84 KEVQALKNWLSIRTSYPHA-----ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEI 138 + V AL +L++R + +FLS +G L+ + +I + G + E Sbjct: 244 QAVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVG-AYEA 302 Query: 139 HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 PH LRHS L + G+D R IQ+ LGH ++ T YT + ++D + R R Sbjct: 303 TPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHPRAR 360 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 11/194 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +L P R+ + LL + G R SE+C L+ SD+D Sbjct: 89 PPKVPKSLPKSLTREEVRKILSVIP--PTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDF 146 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNP---LSR 118 + I + K P+ ++ +K +L R +SE++ + + LS Sbjct: 147 ERSLIIVRGGKGAKDRVVPIPAFLLEGIKAYLETRDD----DSEYLIVEDRRERKDKLSP 202 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++++ G AG+ + PHMLRHS + G+D R IQ+ LGH N+ T YT Sbjct: 203 KTVWYLLKKYGDRAGI--RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTK 260 Query: 179 SNAGRFYGIWDRAR 192 ++AR Sbjct: 261 VTVEHLRKAQEKAR 274 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 12/200 (6%) Query: 6 DNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 + LT S+IE+LL A + P RN + L + G R SE+ L ++ ++ + Sbjct: 125 PHPLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQRQG 184 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---------WVFLSRKGNP 115 + I K G PL + L+ +L A+ +F++ Sbjct: 185 VLRIT-GKGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTNLKR 243 Query: 116 LSRQQFYHIISTSGGNAGL-SLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LSRQQF+ I G+ ++ PH+LRHS L N G D R +Q LGHR+I T Sbjct: 244 LSRQQFWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQ 303 Query: 175 WYTASNAGRFYGIWDRARGR 194 YT + + R Sbjct: 304 IYTLIARQHLQQLHAQHHPR 323 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D LT +++ LL+ + P R+ + L + G R SE+ L ++D+D Sbjct: 101 PKVDRDLPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVD 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES----EWVFLSRKGNPL 116 L+ + K G P+ AL+ + I + S E +FL+ +G L Sbjct: 161 LERNEVRC-IGKNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGKRL 219 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +RQ F+ I+ GLS ++ PH+LRHS + N G D R +Q+ LGH +I T Y Sbjct: 220 TRQGFWLILKQYAEELGLS-DLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIY 278 Query: 177 TASNAGRFYGIWDRARGRQRHA 198 T N + R Sbjct: 279 THLNHESSHTPHAHPAPRASEV 300 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 3/189 (1%) Query: 9 KRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 L E+E L+++ T AR+ + + + G R SE+C + I + + + Sbjct: 109 LPRALARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGFTLDTI-AQGRWVP 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + K+G P+ AL+ W+ + +F++ +G P++RQ + ++ Sbjct: 168 V-VGKRGRERLVPISAPARDALEQWVVRWRPQLAPKHRMLFVNLRGAPITRQGVWLVLKQ 226 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 GL + PH+LRHS + G D R++Q+ LGH ++ T YT + G + Sbjct: 227 RASRVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHVDAV 286 Query: 188 WDRARGRQR 196 + RA R R Sbjct: 287 YQRAHPRAR 295 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-----GPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA + L + L+AA + P A R+ + + + G R SE+C L + Sbjct: 102 PKARRTLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVD 161 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 D+D + + + K T P AL WL R + A+S + L +G Sbjct: 162 DVDTSRRLLRVL-GKGNKQRTVPYGEPAHAALTAWLHEGRPALATADSGPALLLGARGKR 220 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L +Q ++ + G + +I PH LRHS L G D R++Q+ LGH ++ T Sbjct: 221 LDPRQARTVVHQTVSAVGGAPDIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQL 280 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT R + D+A R Sbjct: 281 YTHVTVARLRAVHDQAHPRA 300 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 5/190 (2%) Query: 9 KRNFLTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCI 66 + L + +LL++ + P R+ L + + G R SEI ++ D + Sbjct: 106 LPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEAFV 165 Query: 67 YIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPLSRQQFYHI 124 + K + P+ + AL+ +L R + +FL+ +G PL+R++ I Sbjct: 166 RVL-GKGNKTRLVPVGRSALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTRERIRQI 224 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 + AGL + PH+LRHS L G D R+IQ+ LGH +I T YT R Sbjct: 225 LRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHLEQQRL 284 Query: 185 YGIWDRARGR 194 I R R Sbjct: 285 NSIHHRFHPR 294 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 4/172 (2%) Query: 26 NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKE 85 NT P R+ + L + G R +E+ L + D+++ YI P+ Sbjct: 125 NTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLG--YIRCCNNTKERVIPIGTLS 182 Query: 86 VQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHML 143 + AL+ +++ E + +FL+ G L+RQ F+ II A + I PH L Sbjct: 183 LIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIKVYTKQAAIEKSITPHTL 242 Query: 144 RHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 RHS L G D + +Q+ LGH +I T Y + ++++ R Sbjct: 243 RHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTKHKIKDVYNKTHPRA 294 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 16/210 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT--------------GPHAARNYCLTLLCFIHGFRA 48 K + + L + ++L + AAR++ L L + G R Sbjct: 120 PKQEQRHPRVLNVDQAFAVLDTPDALAGTGSPRIPPATGDALAARDHALAELLYGSGLRI 179 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVF 108 SE L ++D+ L + + K PL + V AL+ WL R + + +F Sbjct: 180 SEALGLDVTDLRLDESVVRVF-GKGARERMSPLSDTSVTALRAWLEQRGTLAPEGEKALF 238 Query: 109 LSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHR 168 + +G L R++ I NAG+ + PH LRHS L + G D R +Q+ LGH+ Sbjct: 239 VGARGGRLDRREAMRRIERLCRNAGVE-PVSPHALRHSFATHLLDAGADLRSVQELLGHQ 297 Query: 169 NIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 + T YT + R ++D A R + Sbjct: 298 RLTTTQRYTRVSLERLMHLYDEAHPRAQKK 327 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 15/207 (7%) Query: 4 KADNKKRNFLTHSEIESLLKAA----------NTGPHAARNYCLTLLCFIHGFRASEICR 53 K D L+ +I +LL + N A+R+ + + + G R E Sbjct: 112 KKDKSLPLILSREDISTLLSSPAPYWAQKKGKNNDFMASRDAAILEIIYSGGLRIQEALD 171 Query: 54 LRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLS 110 + I+L+ + I K T L N QAL+ + + R + + ++ VF++ Sbjct: 172 INFDQINLEESTLKIFGKGK-KQRTAYLGNPAKQALEQYFACRKNAELNWTSANDPVFIN 230 Query: 111 RKG-NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 K LS + + + L +I PH LRHS L + G D R +Q+ LGH N Sbjct: 231 LKDLKRLSARSIQRNLKAYLQSCQLPPDITPHKLRHSFATHLLDAGADLRSVQELLGHEN 290 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQR 196 + T YT + R +D+A + Sbjct: 291 LSTTQIYTHISTDRLLQAYDQAHPHAQ 317 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 17/210 (8%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPH------------AARNYCLTLLCFIHGFRA 48 M +K N + L + ESL+ ++ + RN + L + G R Sbjct: 115 MTSKIKNMLPSVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRV 174 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS---YPHAESE 105 E+ L I DI+ + I + K P +AL W+S ++ E Sbjct: 175 GELTSLNIQDINFSSHTIKVT-GKGNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEE 233 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 VFL +G + ++ I+ +A + +I PH LRHS + N G D R +Q+ L Sbjct: 234 AVFLGTRGKRIDQRLVRQIVHDEAKSAHVP-DISPHALRHSAATHMLNGGADLREVQELL 292 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YT + + +A R Sbjct: 293 GHSSLNTTQRYTHVSIESLKRKYSQAFPRA 322 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D +T +I LL A +T PH R+ L L + G R SE L ++D Sbjct: 97 PPKIDKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVD 156 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNPLSR 118 L CI K P+ + + + R + S + +F+S+K +SR Sbjct: 157 LDRGCIT-ALGKGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISR 215 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 216 QLAWMIVKEYASQAGIG-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTH 274 Query: 179 SNAGRFYGIWDRARGRQ 195 G+ R Sbjct: 275 VANVWLQGVVKEHHSRN 291 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 9/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA-----ARNYCLTLLCFIHGFRASEICRLRIS 57 +AD + L S+ LL A A RN+ + L + G R SE+C L IS Sbjct: 106 PRADQLLPSPLDESDARVLLNTARDEAAAGGASQIRNWAILELTYACGLRVSEVCALDIS 165 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 ++ A + + K P AL +WL R S +FL KG Sbjct: 166 SLNRDALTVRV-VGKGNKERVVPYGPPAADALDHWLVRGRPQLAGERSGNALFLGDKGGR 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 + + ++ + AG+ +I PH LRHS L G D R +Q+ LGH ++ T Sbjct: 225 IDPRIVRSMVHKTAARAGVH-DIAPHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQR 283 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT + R I+ RA R Sbjct: 284 YTHVDTARLSAIYQRAHPRA 303 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+ EI LL P + + L + G R +E+ +R+ + L Sbjct: 112 PRRWKRLPKALSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLHL 171 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEW-VFLSRKGNPLSRQ 119 + I + K P+ +K VQAL+ +L R S VFL+ +G P + Sbjct: 172 EVGFINV-IGKGNKERVVPVGSKAVQALQRYLESGRPKLVTPRSPANVFLTMRGTPFAAV 230 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I +G++ + PHMLRHS L G D R+IQ+ LGH NI T YT Sbjct: 231 TLWKRIKDRVKRSGVARNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHV 290 Query: 180 NAGRFYGIWDRARGR 194 + R + + R Sbjct: 291 SGSRLREVHRKFHPR 305 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 208 bits (531), Expect = 7e-53, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + E+ + + RN+ L + + G R SEI + + ++D Sbjct: 109 KKPGQHLPRYFYQKELTKMFDVVMTDQSALGLRNHLLLEMLYGTGARVSEIANMTLQNVD 168 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE----SEWVFLSRKGNPL 116 A+ + I K + P AL +L ++ S +FL+++G P+ Sbjct: 169 SHARVVTIT-GKGNKTRIVPFGRYAADALAKYLKTGRPVLASKQADTSNKLFLNQRGAPV 227 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + +I+ G +GL+ E+ HM RH+ L N D R +Q LGH ++ T Y Sbjct: 228 TTAGIEYILKQIGKKSGLTQEVTAHMFRHTFATDLLNNQADLRTVQQLLGHSSLSTTQIY 287 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + R Sbjct: 288 THVTTDALQKSYRNFFPRASE 308 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++ LL A + R+ + + + G R +EI L ++ + L Sbjct: 121 PKLWKYLPKVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKL 180 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS---YPHAESEWVFLSRKGNPLSR 118 K L V A++ +L + + +FL+R G LSR Sbjct: 181 TEGYARC-VGKGNKERMVSLNPVAVAAVEAYLRHERPVLTRRNTTEQALFLNRGGKQLSR 239 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 ++I+ + G S E+ PH LRHS + G + R +Q+ LGH NIR T YT Sbjct: 240 VMVWNIVKKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRALQELLGHANIRTTQIYTH 299 Query: 179 SNAGRFYGIWDRARGR 194 + R + R Sbjct: 300 VDHSRLKAVHQMYHPR 315 >UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4E0_ACIC5 Length = 310 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 9/203 (4%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHA--ARNYCLTLLCFIHGFRASEICRLRISDI 59 K T ++ L+ A++ A AR+ + L + G R +E+ + + DI Sbjct: 109 TPKLPKHLPRVPTIEDMNRLVDASSEEVAAWPARDRLILELLYGCGIRNAELVGINLEDI 168 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRK---G 113 + I + R K P+ + QAL+ +L R +S + L+ + Sbjct: 169 QWTNEAILV-RGKGRKERYVPIGDAAAQALRAYLPERNQKLATAGKDSAALLLNARLRGQ 227 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 L+ + I+ GL ++HPH LRH+ G L G D R IQ+ LGH + T Sbjct: 228 GRLTTRSVGRIVKQMALAQGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLSTT 287 Query: 174 VWYTASNAGRFYGIWDRARGRQR 196 YT G+ ++DR R + Sbjct: 288 QRYTQLTVGQVEAVYDRTHPRAK 310 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 23/217 (10%) Query: 1 MKNKADNKKRNFLTHSEIESLLK----------------AANTGPHAARNYCLTLLCFIH 44 + + FL+ E E L A + G AR+ L + + Sbjct: 120 ITPRFSKPVPGFLSERETEKLFDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGC 179 Query: 45 GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY----- 99 G R SE+ L+ +++L+ + + K G PL AL+N+ +R ++ Sbjct: 180 GLRISEVIGLQYENVNLQDSLLRVS-GKGGKQRIVPLGGPARTALRNYFEVRRNFFRMKN 238 Query: 100 -PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDT 158 ++ +VF+++KG + + +PH+LRHS + N G D Sbjct: 239 EESPDASYVFVTKKGRRIYPVLVQRVTRKYLSAVTEIKYKNPHVLRHSFATHMLNSGADL 298 Query: 159 RLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 + + + LGH N+ T YT GR ++ +A + Sbjct: 299 KSVSEMLGHTNLTTTEIYTHVTFGRIKEVYLKAHPKA 335 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 9/203 (4%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K ++ EI ++L+ A GP R+ L L + G R +E+ L D+ Sbjct: 113 QKKLGKHLPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDL 172 Query: 60 DLKAKCIYIHRLKKGFS-TTHPLLNKEVQALKNWLSIR------TSYPHAESEWVFLSRK 112 L + ++ KG PL + VQAL+++L + + +FL+++ Sbjct: 173 YLAGEFPHVKLFGKGRKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKR 232 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G LSRQ + IIS + AG E+ PH LRHS L G R +Q+ LGH ++ Sbjct: 233 GLSLSRQSAWEIISQTAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTT 292 Query: 173 TVWYTASNAGRFYGIWDRARGRQ 195 T YT + + R Sbjct: 293 TQIYTKVSMNTLREVHALTHPRA 315 >UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=C0AAZ7_9BACT Length = 329 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 11/202 (5%) Query: 3 NKADNKKRNFLTHSEIESLL--------KAANTGPHAA-RNYCLTLLCFIHGFRASEICR 53 K + + FLT +++ LL A+ P A R+ L + G R SE+ Sbjct: 130 PKLEKRLPKFLTEQQMKLLLSGPQRLLDNVADITPFTAWRDRLAMELLYGGGLRVSELTA 189 Query: 54 LRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKG 113 L ID + + K PL + L W + + + + V ++ + Sbjct: 190 LDYGQIDFTSGVARVL-GKGRKERLCPLGKVALAVLVKWKNEY-ARDTSPAAPVLVTPEH 247 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 + +Q ++ AGL ++ PH LRHS L N G D RL+Q+ LGH ++ T Sbjct: 248 ERMPVRQVQLMLKRYLALAGLPTDLSPHKLRHSYATHLLNAGADLRLVQELLGHASLNTT 307 Query: 174 VWYTASNAGRFYGIWDRARGRQ 195 YT + R I+D+A R Sbjct: 308 QIYTHVSIARLRDIYDKAHPRA 329 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 4/171 (2%) Query: 32 ARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKN 91 R L L + G R SE L + D+DL+A + +H K G PL + A+ + Sbjct: 249 LRATALLELLYGTGARISEAVGLDVDDLDLEAASVRLH-GKGGRDRIVPLGRYAIAAVAD 307 Query: 92 WLSI-RTSYPHAES-EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGF 149 +L + R + S VFLSR+GN LSRQ + ++ T+ AG+ + PH+LRHS Sbjct: 308 YLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAGVEG-VSPHVLRHSFAT 366 Query: 150 ALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL 200 L + G D R++Q+ LGH ++ T YT R ++ + R A L Sbjct: 367 HLLDGGADVRVVQELLGHASVSTTQIYTLVTVDRLREVYAASHPRALGAAL 417 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + ++L+ EIE LL + P RN + L + G R SE+C LR + + Sbjct: 99 RLSRLLPDYLSLPEIERLLHIYDEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYE 158 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEW-VFLSRKGNPLSRQQ 120 + + + K + P + + ++ IR + + +S G PL+R + Sbjct: 159 SGFLRVK-GKGSKERSVPFGTQVASMSRQYIKNIRPQLCKKNNPPELIVSNNGRPLTRSR 217 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + + A ++ +HPH+LRHS L + D R+IQ+ LGH +I T YT Sbjct: 218 VWQFLKEAAIKAEINKNLHPHVLRHSFASHLLSNNADLRIIQELLGHADIATTEIYTHVE 277 Query: 181 AGRFYGIWDRARGRQ 195 R I + R Sbjct: 278 KTRLQNIHQKFFPRA 292 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 23/216 (10%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN----------------TGPHAARNYCLTLLCFIHGF 46 K + + L+ E+ L+ + P R+ L + G Sbjct: 104 PKGASTLPDVLSVDEVMRLMDSIPLSRHHDGKQGHGDAAADDPVMLRDKALLEFMYATGS 163 Query: 47 RASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-- 104 R SE C + + DIDL K + K P+ + +AL+ +L ++S Sbjct: 164 RVSEACGVDLDDIDLDDKVARLM-GKGSKQRLVPVGSFACEALRRYLRFGRPVLQSKSKG 222 Query: 105 ----EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL 160 VFL+++G LSRQ + II T+G A ++ +HPH LRHS L G D R Sbjct: 223 AAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHITKPLHPHTLRHSFATHLIQGGADVRT 282 Query: 161 IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 +Q+ LGH ++ T YT + + A R R Sbjct: 283 VQELLGHASVTTTQIYTHVSPENLIEAYLTAHPRAR 318 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 83/196 (42%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K L + + +L ++ R+ + + + G R SE+ L I D+D Sbjct: 101 PKVAKSLPKTLDYERLVQMLTPKSSAFSELRDAAMVEVLYSCGLRVSELVGLDIEDVDAS 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K PL +++ +L ++ +F++ + +S + Sbjct: 161 QGFLRVM-GKGSKVRYTPLGESAQKSINRYL----QKTSHTNKALFVNNRQERISTRTVQ 215 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 +II + G+ + +HPHMLRH+ D R +Q++LGH++I+ T YT + Sbjct: 216 NIIKNRALSVGIKVNVHPHMLRHAAATHFLQSSHDLRSVQEFLGHKSIKSTQVYTHLDFL 275 Query: 183 RFYGIWDRARGRQRHA 198 ++D+ R + + Sbjct: 276 ELSKVYDKCHPRAKKS 291 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 9/202 (4%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + + LT E+ +L A + + P R+ + L G R SE+ RL + D+ Sbjct: 107 VAPKQRRELPHVLTAEELAALFDAPDLSCPVGLRDAAMLELFIATGARISELSRLELGDV 166 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAE------SEWVFLSRK 112 + + + + K PL + ++ + +L R + A VF+S + Sbjct: 167 CVAERQVCLL-GKGSKERIVPLYARAIEVYERYLENGRPNLLRAPALGGDACRAVFVSDR 225 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G ++ + AG+S +I PH +RH+ L G D R +Q+ LGH ++ Sbjct: 226 GRAMNSDALRYRFDVLKRKAGISSDITPHAMRHTFATELLGGGADLRSVQELLGHASLST 285 Query: 173 TVWYTASNAGRFYGIWDRARGR 194 T YT R RA R Sbjct: 286 TQIYTHLTPDRLKSAVARAHPR 307 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA K + + LL R+ C+ L + G R +E+ RL + DID Sbjct: 113 PKAAKKLPDAPAIETMNQLLDQPMVEDELLIRDRCMFELIYSSGLRVAELVRLDVHDIDR 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQ 120 + K+ + P+ K + + WL IR + +FL+R+G L+ + Sbjct: 173 SEGIARVT-GKREKTRLVPVGGKALDRVALWLPIRKTLLKDTTEPALFLNRRGQRLTIRS 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ L +HPH LRH+ + D R +Q+ LGH ++ T YT + Sbjct: 232 VQMRLNRLAQQTHLGQTLHPHQLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLD 291 Query: 181 AGRFYGIWDRARGRQ 195 R +++ A R Sbjct: 292 FQRLAQVYESAHPRA 306 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 4/196 (2%) Query: 4 KADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K + + +EIE +L ++ RN + + G R SE+ L++SD+D Sbjct: 106 KTEKKHKLPFSEAEIEKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDF 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQQ 120 + K I + K P++ + LK +L +R + +S +++FL + G + Sbjct: 166 EQKQIKVL-GKGDKERYIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYSTL 224 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 Y II++ ++ PH+LRHS L + G D +++ LGH ++ T YT ++ Sbjct: 225 VYRIINSYFSVVTTKKDVSPHVLRHSFASHLLDNGADLYTVKELLGHSSLASTQVYTNTS 284 Query: 181 AGRFYGIWDRARGRQR 196 + +A R + Sbjct: 285 LAELKKQYKKAHPRAK 300 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 3/191 (1%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K +LT +++ LL + + RN C+ L + G R SE ++I DI + Sbjct: 105 KTSRPLPEYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFR 164 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K+ P + L +L S+ S+ F KG +S + Sbjct: 165 DYYVRVM-GKESKERIVPFYKELGDLLTKYLKKYGSFSQL-SDPFFKGSKGKAISVRSIQ 222 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G L ++HPH+LRHS L + G D R++Q LGH N+ T YT + Sbjct: 223 LLLEKKGRELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYTHVSQD 282 Query: 183 RFYGIWDRARG 193 + Sbjct: 283 TLRRVIAETHP 293 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 3/193 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + +T+ ++E L+ + + R+ CL L + G R SEI L DID Sbjct: 119 PRLPKELPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDF 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + I I R K P+ Q LK +L+ + +S+ +FL+ G L+ + Sbjct: 179 NSNLIRI-RGKGKKERIIPITTLAAQWLKQYLNHPERAGVAKDSQAIFLNCFGTRLTTRS 237 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +GLS I PH +RH+ G+D + IQ LGH ++ T YT + Sbjct: 238 IDRKFQKYLRLSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVS 297 Query: 181 AGRFYGIWDRARG 193 + + Sbjct: 298 MKLKKQTHNESHP 310 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 7/180 (3%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISD 58 + + ++ E+ LL AA+ P R+ + + + G R SE+ L + D Sbjct: 106 ISPRVQKYWPKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDD 165 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPL 116 I+L ++ + +G + PL V LK +L + + +F++ +G L Sbjct: 166 INLDES--HLKCIGRGKTRKVPLSQPAVDVLKLYLERSRPLLVRGQDEQALFVNHRGQRL 223 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +RQ F+ I+ AG+ I PH LRHS + + GID R +Q++LGH +I T Y Sbjct: 224 TRQGFWLILKAYASEAGI-KGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVY 282 >UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510416 Length = 319 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 14/207 (6%) Query: 2 KNKADNKKRNFLTHSEIESLL--------KAANTGPHAA----RNYCLTLLCFIHGFRAS 49 K D++ L + L+ +A N+ P A R+ + + + R S Sbjct: 114 TPKKDSRLPTVLKPQQAADLVSRQRTVHTEADNSDPIEATKWVRDAAILEMLYATAVRVS 173 Query: 50 EICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVF 108 E+ L D+D + I + K P AL+ WLS+R ++ S + +F Sbjct: 174 ELTGLNRGDVDHQRSMITVL-GKGNKERRVPYGKPAQTALQKWLSLRDTFASESSGDALF 232 Query: 109 LSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHR 168 L +G + +Q ++ G + +I PH LRHS + + G D R IQ+ LGH Sbjct: 233 LGVRGGRIGARQVRELVHRYGAADPSAPDIGPHGLRHSAATHMLDGGADLRQIQELLGHS 292 Query: 169 NIRHTVWYTASNAGRFYGIWDRARGRQ 195 + T YT + R + +A R Sbjct: 293 TMSSTQIYTHVSMQRLQETYRQAHPRA 319 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 3/193 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K L+ EI ++K+ + + P RN + LL G R SE+ L I+DI+ Sbjct: 97 PKTDKKLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINH 156 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K PL + + +++ R+ + ++W+F+ G ++R+ Sbjct: 157 SVSNVSV-VGKGNKERLIPLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTREN 215 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FY+I+ AG+ PHMLRH+ L D R IQ LGH++I T YT Sbjct: 216 FYNILQKLVIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYTHVT 275 Query: 181 AGRFYGIWDRARG 193 + +++ Sbjct: 276 HRQILDDYNKYHP 288 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 12/198 (6%) Query: 2 KNKADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K L+ ++E ++ ++ AAR+ + L + G R E+C+ +SD+ Sbjct: 115 TPKKHQHLPEVLSPEKVEEAIEKVSSEDSAVAARDLAIVELLYATGMRVEELCKADVSDV 174 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLS 117 + I + K P ALK WL +R ++P + +FL +G L+ Sbjct: 175 NFSRHIISV-VGKGDKQRIVPFGAPAEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLN 233 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +Q +I ++ PH LRHS A+ G D R++Q+ LGH ++ T YT Sbjct: 234 PRQARRVIHKWA-------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYT 286 Query: 178 ASNAGRFYGIWDRARGRQ 195 +A R + RA R Sbjct: 287 HVSADRLREVHKRAHPRA 304 >UniRef50_B5ENS4 Integrase family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENS4_ACIF5 Length = 314 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 9/203 (4%) Query: 3 NKADNKKRNFLTHSEIESLL-------KAANTGPHAARNYCLTLLCFIHGFRASEICRLR 55 +A+ + ++LT + L+ +AA R+ + L + R SE+ L Sbjct: 103 PRAEQRLPDWLTVDQARLLMQPAISDTEAAPQDFTGLRDQLILELLYSSALRVSELAGLN 162 Query: 56 ISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNP 115 + D+D A + + K P+ AL+ +L+ R + ++ +F++R+G Sbjct: 163 LGDLDPHAGTVRVL-GKGRKERIVPVGQPAWAALRAYLAARPAVAASDEPALFVNRRGQR 221 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ + + G A L +HPH LRHS L D R +Q+YLGH I T Sbjct: 222 LTVRSIQVRVKKLGD-ARLGQPLHPHTLRHSAASHLLQSSGDLRAVQEYLGHAGIGTTAI 280 Query: 176 YTASNAGRFYGIWDRARGRQRHA 198 YT + + ++D+A R R Sbjct: 281 YTHMDYQQLAQVYDQAHPRSRRG 303 >UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMN9_ACIBL Length = 300 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 7/201 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K K T E+ +++ A R+ + L + G R SE+ + + DI Sbjct: 101 TPKLPKKLPRVPTMEELNTVMDAEMPEAASFPERDALIFELLYGCGIRNSELTGINLDDI 160 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRKG-NP 115 + I I R K P + A K +L R H + + ++ + Sbjct: 161 RWSNEAILI-RGKGKKERFVPFGDAAAVAAKVYLKKRQDILAERHKSTNALLINLRDVQR 219 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ + I+ GL ++HPH LRH+ G L G D R IQ+ LGH + T Sbjct: 220 LTSRSVGRIVKKIAVARGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLATTQR 279 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT + ++D+ R + Sbjct: 280 YTQLSTRHVLEVYDKTHPRAK 300 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 1/163 (0%) Query: 33 RNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW 92 R+ L L + G R SE L + D D A + + K PL + V AL+ W Sbjct: 261 RDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVL-GKGSKERMSPLSDTSVDALREW 319 Query: 93 LSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALA 152 L R +F+ +G+ L R+Q II AGL + PH LRHS L Sbjct: 320 LHFRHHLASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHGLRHSFATHLL 379 Query: 153 NMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 G D R +Q+ LGH + T YT ++D+A R Sbjct: 380 EAGADLRSVQELLGHARLATTQRYTHLTLAHLIEVYDKAHPRA 422 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 2/186 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + ++++ E++ +L+A RN + L + G R SE+C L + DI L+ Sbjct: 107 PKTRRRIPEYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLE 166 Query: 63 AK-CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE-WVFLSRKGNPLSRQQ 120 + + + K PL V+ + ++L R +P A +F+ +G P++R+ Sbjct: 167 SDPLVRVKSGKGDKDRIVPLTPDAVRIISDYLKHRDRFPDANRHIKLFVGIRGEPITRKS 226 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ +HPH+ RHSC L G +++Q+ LGH NI T Y Sbjct: 227 VNKMLQNHVKKIFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIYLHIT 286 Query: 181 AGRFYG 186 Sbjct: 287 DREKRE 292 >UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Proteobacteria RepID=Q1LSD3_RALME Length = 369 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRI---SD 58 K L+ +L+ + + R+ + L + G R SE+ +L + D Sbjct: 129 PKRGRPLPKALSVEHAVALVAHRQDDTNESLRDQAVFELFYSSGLRLSELIQLDVRYTED 188 Query: 59 --------IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-----ESE 105 +DL + + K T P+ +K +QALK W+ +R ++ Sbjct: 189 GDYRSSGWLDLDGAEVTVL-GKGSRRRTVPVGSKAIQALKAWIHVREMMLRPGALPEDAH 247 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 +FL +G L I AG+ ++HPHMLRHS + D R +Q+ L Sbjct: 248 ALFLGTRGRRLPISTVQQRIKRQALAAGVPSDVHPHMLRHSFATHMLQSSGDLRAVQEML 307 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 GH +I T YT+ + ++D+A R A Sbjct: 308 GHASISTTQIYTSLDFQHLAKVYDQAHPRAGRA 340 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + FL E + L++A +T P R+ L + G R SE+ L + D+D+ Sbjct: 106 PKLEKRLPRFLYEDEAKELVEAPDTKQPLGMRDRALLETLYAGGLRISELVLLDLGDLDI 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES------EWVFLSRKGNP 115 + I + K+ PL + V+AL+ +L+ A S +FL+ +G Sbjct: 166 SSGYIRVT-GKRARERLVPLGSMAVEALQAYLAKARPRLMANSVAKKINNALFLNCRGER 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+ L +I PH LRHS L N G D R +Q+ +GH + T Sbjct: 225 LSARGIRKILDKYVEKVSLERKISPHTLRHSFATHLLNAGADLRSVQELMGHVRLSSTQV 284 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT R ++ ++ R + Sbjct: 285 YTHVTGERLKKVYRKSHPRAK 305 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 10/204 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K FL +++ R+ + + G R SE+C L ++ +D Sbjct: 152 PKVRRPLPTFLDVDAAAEVMEIPGAETAEGLRDRAMLETLYGAGLRVSELCGLDLTHVDR 211 Query: 62 ---KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-----ESEWVFLSRKG 113 + + K PL + + A++ +L R + +FLSR+G Sbjct: 212 RPADRAAVRV-VGKGDKERIVPLGSHALAAIERYLERRDELADPTTGARDPRALFLSRRG 270 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 + ++ ++ G ++HPH LRH+C L + G D R IQ LGH ++ T Sbjct: 271 ARIGVRRVQALVQRYGALGAGRADLHPHALRHTCATHLLDGGADLRAIQKLLGHASLATT 330 Query: 174 VWYTASNAGRFYGIWDRARGRQRH 197 YT + ++D A R Sbjct: 331 QRYTHVSIDHLLKVYDAAHPMARK 354 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 27/218 (12%) Query: 4 KADNK---KRNFLTHSEIESLLK---------AANTGPHAA----------RNYCLTLLC 41 K K + LT +I LL A A R+ + + Sbjct: 102 KLPKKSFHLPDVLTQDQIIHLLDDPFKPQLLPAPKLTARKALSLKPQACFYRDKAILEML 161 Query: 42 FIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH 101 + G R SE+C L D+ + + + + K P L +++ +N+ + + Sbjct: 162 YGCGLRVSELCGLNQGDVLVSDELVRVF-GKGSKERLVPCLGTALESYQNYCTKWRALLA 220 Query: 102 ---AESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDT 158 ++ VFLS +G +SRQ + ++ G G+ +HPH LRHS + G++ Sbjct: 221 CSPKTTDAVFLSVRGTRISRQAVFSLVERYGSYVGI-KGLHPHTLRHSYATHMLEGGMNL 279 Query: 159 RLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 R++Q+ LGH +I T YT + + A R + Sbjct: 280 RIVQELLGHASISTTQLYTHIDLTHIRSEYMAAHPRAQ 317 >UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX82_METI4 Length = 280 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 20/210 (9%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN---------------TGPHAARNYCLTLLCFIHG 45 M K D +L+ ++++LL A R+ + G Sbjct: 76 MLPKPDRNLPRYLSLEQVQALLNAPQKKWEKEKEKGKKSRWNEWQWKRDQAWLETLYGAG 135 Query: 46 FRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE 105 R E+ L+ + + + K+ L +L ++L ESE Sbjct: 136 LRVGELSSLKRKNF-FPSDLALLVEGKRKKERYCILGEVATASLCSYLE----SCPFESE 190 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 ++F+S +G PL+ + F + AGL I PH LRH+ L G D R IQ+ L Sbjct: 191 FLFVSSRGKPLTPRFFQLSLKEYLAIAGLDQSISPHKLRHTFATHLLEGGADLRSIQELL 250 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YTA +A + R R Sbjct: 251 GHAHLSTTQIYTAVSAEHLKESYFRTHPRA 280 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 4/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L EI LL+A + R+ + + G R SE+ L + ++L Sbjct: 101 PRLPRNLPGVLDEEEILRLLEAPDPKTDEGIRDRAILATFYASGLRVSELAELTLDRLNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQA-LKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + I + KG L+ A LK +L + + +FL+R+ +RQ Sbjct: 161 NEEQIRVT--GKGQKERVAFLDGLSCARLKLYLERVRPSTNTAEKTLFLTRRQTGFTRQG 218 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + +I G+ + PH LRHS L + G+D R IQ LGH +I+ T YT + Sbjct: 219 LWLLIKGYARQCGIDRSVSPHTLRHSFATHLLSHGMDIRSIQILLGHSDIQTTEIYTHVD 278 Query: 181 AGRFYGIWDRARGRQRHA 198 + R + Sbjct: 279 IRMLAEDLAKYHPRGKRP 296 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 30/223 (13%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAA-----------------------RNYCLT 38 KA FL ++ ++L + A R+ + Sbjct: 115 TPKAKKTLPTFLNETQTQTLFDEILDHFNEAFYHDNRAKKHEKVNTLEWDFRYNRDRAIL 174 Query: 39 LLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS 98 + + G R +E+ L I ++D + + + K PL + LKN+L I+ Sbjct: 175 EMFYSCGLRLAELIGLNIMELDFQNGFVKVL-GKGRKQRIIPLGESAQKTLKNYLEIKKK 233 Query: 99 Y------PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALA 152 + E E VF++ KG + ++ + PH+LRH+ L Sbjct: 234 FFEMKRSNVLEREAVFVTEKGKRVYPVLVQRLVKKYLSPVTEQKKKSPHVLRHTFATHLL 293 Query: 153 NMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 N G D R + + LGH N+ T YT + R ++ +A + Sbjct: 294 NNGADLRSVSEMLGHSNLSTTEIYTHISFERLKQVYQQAHPKA 336 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + K F E+ ++++ N G P RN + L + G R SE+ L+I +DL Sbjct: 100 RRGKKKLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYATGMRLSELTDLKIKQLDL 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESE--WVFLSRKGNPLSR 118 + I +H K + + L+ +L + R S E + VFL++ G P+S Sbjct: 160 ENGMILVH-GKGNKDRYVFFDQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISS 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + + AGL+ HPH LRHS A+ N G D R +Q+ LGH ++ T YT Sbjct: 219 RGIAKAVQQIFQKAGLTAGAHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTH 278 Query: 179 SNAGRFYGIWDRARGRQ 195 + + + R+ Sbjct: 279 VSMQHLTVEYRQHFPRK 295 >UniRef50_C2KRF2 Possible integrase/recombinase XerD n=2 Tax=Mobiluncus mulieris RepID=C2KRF2_9ACTO Length = 361 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 81/229 (35%), Gaps = 38/229 (16%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------------------------------TGPH 30 K DN L+ +++ LL A P Sbjct: 135 PKPDNSLPTVLSEAQVARLLNTARLQAYSLGVHQKASKSQAEIPDSIPGDSAVPNRVNPV 194 Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALK 90 R++ L L + G R SE+ LR+ DI I + K G P AL Sbjct: 195 GLRDWALLELLYATGVRVSELTGLRLRDISRSEATIRV-CGKGGKERVAPYGIPAGIALD 253 Query: 91 NWLSIRTSYPHAES----EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHS 146 +L + EWVFL KG L + ++ AG+ ++ PH LRH+ Sbjct: 254 EYLEQGRPVLVSPDRDAGEWVFLGVKGGRLDTRLVRGMLHRMTAVAGVP-DLGPHGLRHT 312 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 L N G D R +Q+ LGH ++ T YT + ++ +A Sbjct: 313 AATHLLNGGADLRCVQEILGHASLGTTQRYTHLSTTHLRQVYLQAHPHA 361 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 2/193 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E+E L++A + P R+ + + G R SE+ + +DL Sbjct: 105 PRLPRSLPKILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDL 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K L + L ++L+ E +FL+R G PL+RQ Sbjct: 165 ATGALRVM-GKGAKERIAFLDERTRHLLSDYLTTVRPAFAREHPELFLARDGAPLTRQAL 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + +I G AG++ + PH+LRHS L G+D R IQ LGH +IR T YT + Sbjct: 224 WTLIKKHGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHVSL 283 Query: 182 GRFYGIWDRARGR 194 R Sbjct: 284 AHLENTLKLHHPR 296 >UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUW8_9GAMM Length = 308 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 4/191 (2%) Query: 7 NKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKC 65 + E+++LL A + R+ + + G R SE+ L S +DL+A Sbjct: 118 RHLPAVPSEGEVDALLAAPDRRTVLGLRDAAMLETLYATGLRVSELVGLLCSQLDLEAGV 177 Query: 66 IYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQFYH 123 + + K P+ ++ L +L H +S +FL+ +G +SRQ+F+ Sbjct: 178 V-LTLGKGSKERLIPVGEVALETLHRYLREARGALLGHKQSPALFLTVRGEAMSRQRFWQ 236 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I AG+ PH LRH+ L + G D R +Q LGH + T YT R Sbjct: 237 TIKAHATKAGIRSAFSPHSLRHAFATHLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQAR 296 Query: 184 FYGIWDRARGR 194 + + R Sbjct: 297 LQNLHRQHHPR 307 >UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9N6_9BACT Length = 308 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 6/196 (3%) Query: 5 ADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 + L+ EI+ LL++ + R+ + + G RASEIC L ++ +D+ Sbjct: 106 KPRRLPQVLSDGEIDRLLESCSGESWMDVRDRTILQILADCGLRASEICSLTLASVDMDT 165 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQF 121 + +++ R K + P L WL++R ++F SR G+ L+R Sbjct: 166 RFLHV-RGKGNKDRSVPFGASVADWLTKWLAVRADGHPTGGARSFLFASRTGDRLTRIDL 224 Query: 122 YHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + +I G AG++ +HPH+LRHS L G+D R +Q++LGH +I T YT + Sbjct: 225 WRLIRRRGERAGVAKARLHPHVLRHSVATRLLRRGMDLRTLQEFLGHSSIGTTEKYTHFD 284 Query: 181 AGRFYGIWDRARGRQR 196 ++DR R Sbjct: 285 LE-LRDVYDRCHPHAR 299 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 9/199 (4%) Query: 4 KADNKKRNFLTHSEIESLLK-----AANTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K DN L+ +I L A +A R++ + L + G R +E+ L ++ Sbjct: 106 KVDNHLPQVLSLEQINQLFNHLVETAQTGNVNAIRDWATSELLYSCGIRVAELVGLNLTS 165 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPL 116 +D + + + K P +++L+ W++ R + S + +FL +G + Sbjct: 166 VDGSNRTLRV-IGKGNKERLVPFGTPALESLRAWVTQGRPQLVNERSGQALFLGSRGGRI 224 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 ++ + + AG+ + + PH LRH + G D R +QD LGH ++ T Y Sbjct: 225 DQRIVRECLEKACVQAGVPV-LSPHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQRY 283 Query: 177 TASNAGRFYGIWDRARGRQ 195 T +A R I +A R Sbjct: 284 THVDAVRLSNIMRQAHPRA 302 >UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia solanacearum RepID=XERC2_RALSO Length = 347 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 3/194 (1%) Query: 3 NKADNKKRN-FLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ E+E++L A+ P+ R+ + L + G R E+ L + D+D Sbjct: 124 PKLPKHLPRAILSVQEVEAILAEADPATPYGLRDRAMLELLYSTGIRRMEVAGLALYDVD 183 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQ 119 + ++ K P+ + + L +L R AE E +F++ G P+S + Sbjct: 184 ATRRLAFVRDGKGAKDRVVPVGVRALAWLDRYLLEARPQLIVAEREALFVTDYGEPVSPE 243 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + AG+ H+LRH+ + G D R++Q LGH + T YT Sbjct: 244 YVASRVKRYMEFAGIQKPGATHLLRHAMATHMLEAGADVRVLQALLGHAQLNTTEIYTHV 303 Query: 180 NAGRFYGIWDRARG 193 + I D Sbjct: 304 SIEHLRAIHDATHP 317 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 5/187 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + LT + L+ AA T AARN CL L + G R +E+ L+ SD+D Sbjct: 126 PKWPDHLPQALTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDLDET 185 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + I + K P AL W + P +E WVF + G L+ + + Sbjct: 186 ERWITVM-GKGSKERMVPYGQWAASALAEW---KAQCPPSEKGWVFPGKGGKSLTERTVH 241 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ + AG + PH LRH + G + +Q+ LGH ++ T Y + Sbjct: 242 RLVEAASQLAG-TPGASPHTLRHCFATHMLEGGASVKAVQELLGHESLLTTQRYLRISPE 300 Query: 183 RFYGIWD 189 R +D Sbjct: 301 RLRRSYD 307 >UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francisella RepID=B0TX96_FRAP2 Length = 293 Score = 202 bits (514), Expect = 6e-51, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 3/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K+ K + E+ LL + R+ L + G R SE+ + + DI++ Sbjct: 100 PKSSKKLPKAVNTDELAYLLDIKPSNNIETRDIACFDLLYSCGIRLSELSSIELKDININ 159 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 K I + K +K + L WL+ R +Y + ++F+S+ G L+ + Sbjct: 160 QKSIRV-IGKGNKERVVYFGSKTLINLNRWLNTRDTY-SPKCNFLFISQNGEHLTNRSIQ 217 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I + IHPHMLRHS + + D ++D LGH +I T YT N Sbjct: 218 KRIEIFAQKYA-TKHIHPHMLRHSFATHVLDSSKDLLAVKDLLGHADISSTQIYTHLNFQ 276 Query: 183 RFYGIWDRARGRQRHA 198 + ++D+A R + Sbjct: 277 QLASVFDKAHPRAKKK 292 >UniRef50_A6G048 Site-specific recombinase, phage integrase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G048_9DELT Length = 346 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 20/214 (9%) Query: 2 KNKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K L ++ ++ G R+ L + + G R SE L ++D+ Sbjct: 101 RPKLGRKLPVALPVEDLTEMIDGEQRPGAVGLRDRALLEVLYGAGLRVSEAVALNLADLR 160 Query: 61 LKAK------CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE--------- 105 + + + + K PL K +A++ WL R Sbjct: 161 WEGSGDAARLTLRVLQGKGNKDRVVPLGRKGAEAMRAWLDTREGLLAPTPREGMRSPARI 220 Query: 106 ----WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLI 161 VFL +G LS + ++ +G + PH LRHS L G D R I Sbjct: 221 DAGKAVFLGARGGRLSTRVAREVVYRRCQASGARAVVGPHGLRHSFATHLLQSGCDLRSI 280 Query: 162 QDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 Q LGH ++ T YT + G + +++RA R Sbjct: 281 QSMLGHASLSTTQRYTHLDMGHLFSLYERAHPRA 314 >UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX Length = 187 Score = 201 bits (513), Expect = 8e-51, Method: Composition-based stats. Identities = 103/186 (55%), Positives = 131/186 (70%), Gaps = 2/186 (1%) Query: 10 RNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 R +LT E+ L+ AA + RN CL ++ FIHGFRASE+ LR+SDID K + I Sbjct: 3 RKYLTQDEVYRLMDAAQSMSFPERNRCLIMMAFIHGFRASELLDLRLSDIDASGKQLNIR 62 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-ESEWVFLSRKGNPLSRQQFYHIISTS 128 R+K GFSTTHPLL E +K WL R + E +W+FLSRK P+SRQ F+ II + Sbjct: 63 RIKNGFSTTHPLLPDEYNLIKLWLKQRKLIENGVEGDWLFLSRKRRPISRQHFFSIIREA 122 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G AGL+++ HPHMLRH+CGFALA+ G+DTRL+QDYLGHRNI+HTV YTASNA RF G+W Sbjct: 123 GKRAGLAVKAHPHMLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVW 182 Query: 189 DRARGR 194 + + R Sbjct: 183 KK-KPR 187 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 201 bits (513), Expect = 8e-51, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 24/216 (11%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAA-----------------RNYCLTLLCFI 43 + + D K F++ E L + + A R+ + + + Sbjct: 120 VTPRLDKKVPRFVSEEEARQLFRRFESQEDNAALQGDGKKAEVRQFETFRDRAVLEVLYG 179 Query: 44 HGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---- 99 G R SE+ L +D+DL + + K PL V+AL+ + +R ++ Sbjct: 180 CGLRLSELIALERADVDLVHGFLKVT-GKGRKQRIVPLGEPAVEALRKYFEVRRNFFRIP 238 Query: 100 --PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGID 157 ES VF++ +G L + S + +PH+LRHS + N G D Sbjct: 239 LERTGESSRVFVTSRGRQLYPMLVQRMTKRYLTPVSESEKKNPHILRHSFATHMLNGGAD 298 Query: 158 TRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARG 193 + + + LGH ++ T YT R I+D+A Sbjct: 299 LKSVSEMLGHSSLTTTELYTHVTFSRLKEIYDKAHP 334 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 201 bits (513), Expect = 9e-51, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L E+ +LL A R+ L L + G RA E+ L + I+ Sbjct: 116 PRKAQRLPYVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEF 175 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE-WVFLSRKGNPLSRQ 119 + + + K + P ++A+ +L R + AES+ +FLS+ G LS Sbjct: 176 DGERVRVE-GKGAKTRIVPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTS 234 Query: 120 QFYHIISTSGGNA-GLSLE--IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + A G+S + PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 235 DVRRRLRVWARQAAGVSTAGGVSPHALRHSFATHLLENGADLRSIQELLGHASISTTQVY 294 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + R + + R Sbjct: 295 TRVESARLRSAYANSHPRA 313 >UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABE3_GEMAT Length = 324 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 16/208 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAA-----RNYCLTLLCFIHGFRASEICRLRIS 57 K +L ++ E+L++ A T + RN + L + G R SE+ + ++ Sbjct: 118 PKLPRTLPAYLDRTQAETLMQHAATRAQSLEFTDVRNLAMLELFYSSGLRLSELRGVDLA 177 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE----------WV 107 D+DL ++ + + R K PL + +AL+N+L R + S V Sbjct: 178 DLDLVSQQVKV-RGKGRKERIVPLGDHAQRALRNYLVKRDALIAQASGGAVGRRVARGAV 236 Query: 108 FLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGH 167 FLS +G +S + H + T ++ H LRH+ L + G D R +Q+ LGH Sbjct: 237 FLSERGARISARAVQHAMVTLMSAVSEGADLTTHSLRHTFATHLVDAGADLRAVQELLGH 296 Query: 168 RNIRHTVWYTASNAGRFYGIWDRARGRQ 195 +I T YT ++ R ++ +A R Sbjct: 297 ASISTTQIYTHTSVDRLKKVYRQAHPRA 324 >UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6I8_9ACTN Length = 342 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 11/203 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ S IE LL R+ L L + G R SE L +SDI Sbjct: 141 PKIPKTLPHVLSESSIEKLLATCQEDTVCGLRDRALLELLYATGCRISEAAHLCVSDISF 200 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE---------SEWVFLSRK 112 +K + + K P+ + + L +L+ ++ ++ VF+S + Sbjct: 201 DSKQVRLF-GKGSKERIVPIYPECARILHMYLTTARPVLLSKQKNQAQAQTNQHVFISTR 259 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G +S Q ++ + L PH +RHS L + G D R +Q+ LGH ++ Sbjct: 260 GKAMSDQALRYVFEHYMRLSHLQEIATPHTMRHSFATELLSHGADLRSVQELLGHASLAT 319 Query: 173 TVWYTASNAGRFYGIWDRARGRQ 195 T YT + RA R Sbjct: 320 TQIYTHVSVNALKDAARRANPRA 342 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 3/193 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + LT+ ++ +L+ A R+ CL L + G R SEI L +DID Sbjct: 119 PRLPQELPSPLTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEITALNRADIDF 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 ++ ++I R K P+ VQ L+++L+ + + + FL+R G LS + Sbjct: 179 QSHLLHI-RGKGKKERIVPMTKVAVQWLQDYLNHPDRASVEQDHQACFLNRFGKRLSTRS 237 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 GLS I PH +RH+ G+D + IQ LGH ++ T YT + Sbjct: 238 IDRKFQQYLLKTGLSGSITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYTHVS 297 Query: 181 AGRFYGIWDRARG 193 I D Sbjct: 298 MKLKKQIHDETHP 310 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 305 5e-82 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 302 4e-81 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 296 3e-79 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 294 1e-78 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 293 2e-78 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 293 3e-78 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 292 3e-78 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 292 3e-78 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 290 1e-77 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 290 2e-77 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 289 4e-77 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 288 9e-77 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 288 9e-77 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 287 1e-76 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 287 1e-76 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 286 3e-76 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 285 5e-76 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 285 6e-76 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 285 6e-76 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 285 6e-76 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 285 6e-76 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 285 8e-76 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 283 2e-75 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 283 2e-75 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 282 3e-75 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 282 4e-75 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 282 4e-75 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 282 4e-75 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 282 5e-75 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 282 5e-75 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 282 6e-75 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 282 6e-75 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 281 9e-75 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 281 9e-75 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 281 1e-74 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 281 1e-74 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 280 1e-74 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 280 1e-74 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 280 2e-74 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 280 3e-74 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 279 3e-74 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 278 6e-74 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 278 9e-74 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 277 1e-73 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 277 1e-73 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 277 2e-73 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 276 2e-73 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 276 3e-73 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 276 3e-73 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 276 4e-73 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 275 4e-73 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 275 5e-73 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 275 5e-73 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 275 7e-73 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 275 7e-73 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 274 1e-72 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 274 1e-72 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 274 1e-72 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 274 1e-72 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 274 1e-72 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 274 1e-72 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 273 2e-72 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 273 2e-72 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 273 2e-72 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 273 2e-72 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 273 2e-72 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 273 2e-72 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 273 2e-72 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 273 3e-72 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 273 3e-72 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 273 3e-72 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 273 3e-72 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 273 3e-72 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 272 4e-72 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 272 4e-72 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 272 4e-72 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 272 5e-72 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 272 6e-72 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 272 6e-72 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 272 7e-72 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 272 7e-72 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 271 1e-71 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 271 1e-71 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 270 1e-71 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 270 1e-71 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 270 2e-71 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 270 2e-71 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 270 2e-71 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 270 2e-71 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 270 2e-71 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 270 2e-71 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 270 2e-71 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 269 3e-71 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 269 3e-71 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 269 4e-71 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 269 4e-71 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 268 6e-71 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 268 6e-71 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 268 7e-71 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 268 7e-71 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 268 9e-71 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 267 1e-70 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 267 1e-70 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 267 1e-70 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 267 2e-70 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 267 2e-70 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 267 2e-70 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 267 2e-70 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 267 2e-70 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 267 2e-70 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 267 2e-70 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 266 3e-70 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 266 3e-70 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 266 3e-70 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 266 3e-70 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 266 4e-70 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 265 5e-70 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 265 5e-70 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 265 5e-70 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 265 5e-70 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 265 5e-70 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 265 9e-70 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 264 9e-70 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 264 1e-69 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 264 1e-69 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 264 1e-69 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 264 1e-69 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 263 2e-69 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 263 2e-69 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 263 3e-69 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 263 3e-69 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 263 3e-69 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 262 4e-69 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 262 4e-69 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 262 5e-69 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 262 6e-69 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 262 6e-69 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 262 7e-69 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 262 7e-69 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 261 8e-69 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 261 9e-69 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 261 1e-68 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 261 1e-68 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 261 1e-68 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 260 1e-68 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 260 2e-68 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 260 2e-68 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 260 2e-68 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 259 3e-68 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 259 3e-68 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 259 3e-68 UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ... 259 3e-68 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 259 3e-68 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 259 4e-68 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 259 4e-68 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 259 4e-68 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 259 4e-68 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 259 5e-68 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 259 5e-68 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 258 6e-68 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 258 7e-68 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 258 8e-68 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 258 9e-68 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 257 1e-67 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 257 2e-67 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 257 2e-67 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 257 2e-67 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 257 2e-67 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 257 2e-67 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 257 2e-67 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 257 2e-67 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 257 2e-67 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 257 2e-67 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 256 3e-67 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 256 3e-67 UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter ... 256 4e-67 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 255 5e-67 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 255 5e-67 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 255 6e-67 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 255 7e-67 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 255 8e-67 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 255 9e-67 UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae D... 254 1e-66 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 254 2e-66 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 253 2e-66 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 253 2e-66 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 253 2e-66 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 253 2e-66 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 253 3e-66 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 253 3e-66 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 252 4e-66 UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylaci... 252 4e-66 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 252 4e-66 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 252 4e-66 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 252 4e-66 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 252 4e-66 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 252 5e-66 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 252 5e-66 UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae... 252 6e-66 UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collins... 251 8e-66 UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n... 251 9e-66 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 251 1e-65 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 251 1e-65 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 251 1e-65 UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acido... 250 1e-65 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 250 2e-65 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 250 2e-65 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 250 2e-65 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 250 2e-65 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 250 2e-65 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 250 3e-65 UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Br... 250 3e-65 UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=... 249 3e-65 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 249 4e-65 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 249 4e-65 UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Prote... 248 6e-65 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 248 1e-64 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 248 1e-64 UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francise... 247 1e-64 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 247 2e-64 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 247 2e-64 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 247 2e-64 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 247 2e-64 UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithio... 245 5e-64 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 245 5e-64 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 245 7e-64 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 245 8e-64 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 245 8e-64 UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacter... 245 9e-64 UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas a... 245 9e-64 UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candid... 244 1e-63 UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybac... 244 1e-63 UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia so... 244 1e-63 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 243 2e-63 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 243 2e-63 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 243 2e-63 UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira Rep... 243 2e-63 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 243 2e-63 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 243 3e-63 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 242 4e-63 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 242 5e-63 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 242 6e-63 UniRef50_A6G048 Site-specific recombinase, phage integrase famil... 242 6e-63 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 242 7e-63 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 242 8e-63 UniRef50_C8WGZ0 Integrase family protein n=4 Tax=Coriobacteriace... 242 8e-63 UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax... 241 1e-62 UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desu... 241 1e-62 UniRef50_C2KRF2 Possible integrase/recombinase XerD n=2 Tax=Mobi... 241 1e-62 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 240 2e-62 Sequences not found previously or not previously below threshold: >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 305 bits (784), Expect = 5e-82, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 5/199 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +L + +T R+ + L + G R SE+ L++SD+ L Sbjct: 100 PKKSKMLPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHL 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES---EWVFLSRKGNPLSR 118 + + K P+ ++++L+ ES E++FL+ +GN +R Sbjct: 160 ELGFLQ-TIGKGNKQRIIPIGQAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTR 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ + AG+ ++ PH LRHS + G D R++Q+ LGH +I T YT Sbjct: 219 QGFWKNLKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTH 278 Query: 179 SNAGRFYGIWDRARGRQRH 197 R I+ +A R + Sbjct: 279 LTNERMKEIYQQAHPRAKK 297 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 302 bits (776), Expect = 4e-81, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + ++ S++ +LL + A R+ + L + G R +E+ L + D+ Sbjct: 105 TPKVGKPLPDAISISQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDV 164 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLS 117 DLK + K P+ + Q+++ +L IR + AE + +FL+R+G+ L+ Sbjct: 165 DLKEGFVRCF-GKGRKERMIPIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ + I+ AGL + PH LRHS + + G D R +Q+ LGH NI T YT Sbjct: 224 RQGLWQILKGYAREAGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYT 283 Query: 178 ASNAGRFYGIWDRARGRQR 196 + +++A R + Sbjct: 284 HLTSEHIKRSYEKAHPRAK 302 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 296 bits (759), Expect = 3e-79, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K L+ E++ L++ N P R+ + L + G R SE+ L++ D++ Sbjct: 101 TPKIKRKLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLN 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSR 118 A + K P+ + ++ +L+ + +FL+ +G PLSR Sbjct: 161 PTAGFLRCM-GKGRKERIIPVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ I+ A L E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 QGFFKILGNYVEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 LTKSRLREVYQQYHPRS 296 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 294 bits (754), Expect = 1e-78, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L EIES LK + P RN + + G R SE+ L I ++DL Sbjct: 99 PKIPMYLPEVLDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDL 158 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + K + K PL + V++LK +LS+R + + E +FL++KG ++RQ Sbjct: 159 EEKYVRCF-GKGEKERIVPLGDYAVESLKRYLSVRHLFNPKDKEALFLNKKGERITRQGV 217 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II GL ++ PH RHS L + G D R++Q+ LGH +I T YT + Sbjct: 218 WFIIKAYSKILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVS 277 Query: 182 GRFYGIWDRARGRQRH 197 + + ++ RA R Sbjct: 278 SKLHEVYQRAHPLMRR 293 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 293 bits (752), Expect = 2e-78, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 3/198 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + FL + EIE L++ + R+ + L + G R SE LR D+D Sbjct: 106 TPKIAKRIPEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVD 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQ 119 ++IH K P + + L +++ +R + ++ +F++++G L+ + Sbjct: 166 FADNILHIH-GKGDKERLVPFYDLAKELLVSYIKDVRDVWATSDETALFVNQRGKKLTTR 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 ++++ + L + +HPHM RHS L + G D R +Q+ LGH ++ T Y Sbjct: 225 GVQYLMNKAVEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHV 284 Query: 180 NAGRFYGIWDRARGRQRH 197 + R ++ A R + Sbjct: 285 SKERLKAAYEHAHPRAKE 302 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 6/195 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D K F++ ++ E LL +T R+ + + G R SE+ + I+DID Sbjct: 109 TPKTDKKLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADID 168 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + R K P+ N + A++ +L R A++E +FL++ L+ + Sbjct: 169 FHSGIVKV-RGKGSKERILPVGNHALNAIQLYLEKR----KADNEALFLNKFHGRLTERS 223 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +I A + L + PH RHS L + G D R +Q++LGH ++ T YT Sbjct: 224 VARMIEKYMKKAAMHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVT 283 Query: 181 AGRFYGIWDRARGRQ 195 R ++D+ R Sbjct: 284 TERLKQVYDKTHPRA 298 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 292 bits (750), Expect = 3e-78, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L +E+E LL T P R+ + L + G R SE+ L+ +D+ Sbjct: 101 TQKTERALPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIELKTADVH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSR 118 L I K P+ A++ +++ S+ +FL+ G +SR Sbjct: 161 LSMGFIRCF-GKGRKERIVPIGEAAASAIEEYMTKARGKLLKNNVSDALFLNHHGKQISR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ + AG+ E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 QGFWKNLKKIALEAGIKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 VTKTRLKDVYKQFHPRA 296 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 292 bits (750), Expect = 3e-78, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L ++E LL +++T P R+ + + + G R +E+ L++ D+ Sbjct: 101 TPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE---SEWVFLSRKGNPLS 117 L I K PL L+ +L +++VFL+ G L+ Sbjct: 161 LHMGFIQ-TIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLT 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ F+ I+ +G+ I PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 RQGFWKILKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 HVTKLRLKDVYKQFHPRA 297 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 290 bits (745), Expect = 1e-77, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K + L E+ +LL+ + R+ + L + G R SE+ L + +++L Sbjct: 101 PKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAE-SEWVFLSRKGNPLSRQ 119 + + K PL + ++ L ++ IR +E +FL+ G PLSRQ Sbjct: 161 IMGFVRVF-GKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + +I +G A + + PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 AIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHV 279 Query: 180 NAGRFYGIWDRARGRQ 195 + + ++++ R Sbjct: 280 SKSQIRKMYNQFHPRA 295 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K L+ E+E LL+ R+ + L + G R SE+ L + D++L Sbjct: 103 PKVEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + + I + K P+ + V AL+ +L+ + + + +F++ G L+RQ Sbjct: 163 EMQYIRCN--KGARERIVPIGSVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQ 220 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II A ++ +I PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 221 GFWKIIKQYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQL 280 Query: 180 NAGRFYGIWDRARGRQ 195 R I+ + R Sbjct: 281 AKNRIKEIYKKTHPRA 296 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + L+ +++SLL+A + P R+ + L + G R +E+ L + +I Sbjct: 123 ISPKLPKRLPKDLSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENI 182 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLS 117 L+ + + K G P+ V ++ ++ + S+ VF S++ ++ Sbjct: 183 SLRQGVVRV-IGKGGKERLVPMGENAVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMT 241 Query: 118 RQQFYHIISTSGGNAGLSLEI-HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 RQ F++ I AG+ E+ PH+LRH+ L N G D R++Q LGH ++ T Y Sbjct: 242 RQTFWYRIKHYSVIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIY 301 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R I + R Sbjct: 302 THVATERLKQIHAQHHPRA 320 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 288 bits (738), Expect = 9e-77, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + L+ E+ S+L+ + + RN L L + G R SE+ +++ DI Sbjct: 101 RPKIEKTLPTVLSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIH 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQ 119 ++ + + K P+ + + A++N+L R +++++F++ +G LSR Sbjct: 161 MQQSYVIVT-GKGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRV 219 Query: 120 QFYHIISTSGGNAGL-SLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+ ++ A L ++ PH LRHS L G+D R +Q+ LGH +I T YT Sbjct: 220 GFFKVLKKLASEANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTH 279 Query: 179 SNAGRFYGIWDRARGRQRH 197 + R ++++ R + Sbjct: 280 ISQSRLKQVYNKTHPRAKE 298 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 288 bits (738), Expect = 9e-77, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 6/197 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + L EI LL + R+ + + G R SE+ L + D+ Sbjct: 105 PKKERRLPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDLHE 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS----YPHAESEWVFLSRKGNPLS 117 + + K P+ + + +K + E +FL+ + L+ Sbjct: 165 DLGLVRVL-GKGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 RQ + +I +AG++ ++ PH LRH+ L G D R++Q+ LGH +I T YT Sbjct: 224 RQAIWQMIKKYCQSAGITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYT 283 Query: 178 ASNAGRFYGIWDRARGR 194 + ++ + R Sbjct: 284 NLSQKHILQVYQKTHPR 300 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 287 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 4/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K ++ LT +EIE++L + + RN L + GFR SEIC L+++D+ Sbjct: 106 TPKKNSHLPQVLTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLH 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 + I K P+ + + + ES ++FL+ G+ +SR Sbjct: 166 DELGLIT-TIGKGQKQRIVPIGEMSLLYISKYFKESRPILLKDKESPYLFLNDHGHRISR 224 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + ++ AG+ +I PH LRHS L G D R++Q+ LGH +I T YT Sbjct: 225 QGIFKLVKEIAIKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIYTH 284 Query: 179 SNAGRFYGIWDRARGRQR 196 + ++R R + Sbjct: 285 VSQKHIREQYNRFHPRAK 302 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 287 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 3/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++E+L+ A + + R+ + + + G R SE+ LR+ I+L Sbjct: 113 PKIGRALPKDLSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 K + I K PL ++ +L+ R + ++++FL++ G +SRQ Sbjct: 173 KQGFVRIT-GKGNKERLVPLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQN 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F++ I A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 232 FWYAIKRYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA 291 Query: 181 AGRFYGIWDRARGR 194 R + + R Sbjct: 292 QHRMQALHHQYHPR 305 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA + + +I LL + + P R+ + L + G R SE+ L + D+DL Sbjct: 108 PKASKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLA 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K P+ +K ++AL WL++R + + VFL+++G LS + Sbjct: 168 GREVR-LLGKGNKERIVPIGSKALEALNRWLAVRNQF-KPQDNAVFLNKRGGRLSHRSIQ 225 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G GL +HPH LRHS + D R +Q+ LGH N+ T YT + Sbjct: 226 LVMQKWGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQ 285 Query: 183 RFYGIWDRARGRQRHA 198 I+D A R + Sbjct: 286 HLAKIYDAAHPRAKRK 301 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 285 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 3/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++E+L++A + T R+ + + + G R SE+ LR+ I+L Sbjct: 113 PKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 K + I K PL ++ +L R + ++++FL++ G +SRQ Sbjct: 173 KQGYLRIT-GKGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQN 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F++ I A + E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 232 FWYAIKHYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA 291 Query: 181 AGRFYGIWDRARGR 194 R + ++ R Sbjct: 292 QVRMQQLHEKHHPR 305 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 7/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +++ESLL A +T R+ + + + G R SE+ L + ++ Sbjct: 114 TPKIGRSLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVN 173 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS-----YPHAESEWVFLSRKGNP 115 L A + I K + PL AL ++L+ + VFL+ +G Sbjct: 174 LNAGWLQIT-GKGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGY 232 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 ++RQ F+++I AG+ ++ PH LRH+ L N G D R +Q LGH ++ T Sbjct: 233 MTRQNFWYMIKKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQI 292 Query: 176 YTASNAGRFYGIWDRARGR 194 YT R + + R Sbjct: 293 YTHVATARLQQLHEAHHPR 311 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 1/195 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K L ++ LL+ + P A R+ + L + G R SE+ + DI Sbjct: 119 PKFAKPLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAA 178 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 I + R K P+ +K + ALK WL IR + + + VFLS K N +S +Q Sbjct: 179 NGEILV-RGKGNKERLIPVGSKALNALKKWLIIRPQFANPDEVAVFLSSKKNRISVRQVR 237 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 + G G+S ++HPH LRHS + D R +Q+ LGH ++ T YT + Sbjct: 238 LRMQEWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQ 297 Query: 183 RFYGIWDRARGRQRH 197 ++D R + Sbjct: 298 HLAKVYDNTHPRAKK 312 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K L+ E+E LL R+ + L + G R SE+ L + DI+ Sbjct: 101 PKVEKKLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINF 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE--WVFLSRKGNPLSRQ 119 I + K T P+ + A+ +L ++ +S+ +F++ G L+RQ Sbjct: 161 DLGLIKCN--KGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II A ++ +I PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 219 GFWKIIKHYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQI 278 Query: 180 NAGRFYGIWDRARGRQ 195 + ++ + R Sbjct: 279 AKNKIKDVYKKTHPRA 294 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 5/199 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + ++ ++++LL A + P R+ + L + G R +E+ L + +I Sbjct: 108 VSPKLPQRLPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENI 167 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLS 117 L+ + + K G P+ + ++ ++ E S+ VF S++ ++ Sbjct: 168 SLRQGVVRVT-GKGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMT 226 Query: 118 RQQFYHIISTSGGNAGLS-LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 RQ F+H I AG+ + PH+LRH+ L N G D R++Q LGH ++ T Y Sbjct: 227 RQTFWHRIKFYAVIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIY 286 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R I + R Sbjct: 287 THVATERLKQIHSQHHPRA 305 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 7/200 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAA-RNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K FLT + L++A + R+ + L + G R SE+C L + D+DLK Sbjct: 101 KIKRALPKFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLK 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIR-----TSYPHAESEWVFLSRKGNPLS 117 I + R K P+ K +ALK +L+IR + +F++ +G +S Sbjct: 161 EGLIKV-RGKGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRIS 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +Q I+ G+ +I PH LRH+ L G D R+IQ+ LGH ++ T YT Sbjct: 220 DRQVRRIVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQRH 197 + ++D++ + Sbjct: 280 HVDLKHLIEVYDKSHPLSKE 299 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K +FLT +I +LL+A R+ + + G R SE+ L +SD D Sbjct: 113 TPRTGRKLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWD 172 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH--AESEWVFLSRKGNPLSR 118 A I + K P+ + +AL +WL R + P +S+ +FL+R L+ Sbjct: 173 QDANIIRVL-GKGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTS 231 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ GL + PH LRH+ L + G D R +Q+ LGH+++ T YT Sbjct: 232 RSVGRMLEKYLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQRH 197 + R +++A + Sbjct: 292 VSTKRLLETYEKAHPHAQR 310 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + D + FLT +E+ LL+ ++ P R+ L + G R SE+ +L I ++DL Sbjct: 101 PRLDKRLPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNPLSRQ 119 + I + K + +Q+++ +L++ + +FL+ G LS + Sbjct: 161 HSHQIRVW-GKGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSAR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F + AG+ +HPHMLRH+ L + G D R++Q+ LGH N+ T YT Sbjct: 220 SFQERLDKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHV 279 Query: 180 NAGRFYGIWDRARGRQR 196 + ++ + + Sbjct: 280 TKSQARKVYMSSHPLAK 296 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 282 bits (724), Expect = 3e-75, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 13/210 (6%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + + FL EI LL +T P R+ L L + G R E+ L DID Sbjct: 143 TPKLERRLPVFLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVALNRGDID 202 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW-----------VFL 109 + + K P+ ++ +QAL ++L A + +FL Sbjct: 203 YSEGWVIVW-GKGRKERAVPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPLFL 261 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 ++ G LS + ++ LS +I PH +RH+ + N G D R +Q+ LGH + Sbjct: 262 NKLGGRLSDRSVRRLLDRYVSQLALSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHAS 321 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQRHAV 199 + T YT R + RA RQR A Sbjct: 322 LSTTQIYTHVTTQRLRTEYLRAHPRQRRAA 351 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K +K +FL E++ L KA P R+ + L + G R E +L ++DIDL Sbjct: 125 PKQASKLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADIDL 184 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT----SYPHAESEWVFLSRKGNPLS 117 + ++ K P+ + AL ++ ++E++ +FL+ +G PL+ Sbjct: 185 RIGTAFVK-GKGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPLT 243 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + +++ A + I PH LRHS L N G D R++Q+ LGH ++ T YT Sbjct: 244 DRSIRRMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYT 303 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ R Sbjct: 304 HVTKDRLREVYKNHHPRA 321 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + + L+H E++ LL A R+ + L + G R SE+ L I+ + Sbjct: 103 KVWMRLPDTLSHEEMDQLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSINWQ 162 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQ 120 + + + K P+ + ++ + A++ +FL++ G ++RQ Sbjct: 163 VGYL-VVQGKGNKERIVPIGQVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQG 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ ++ AGL ++HPH RHS L G D R +Q LGH +I T YT Sbjct: 222 FWKLVRKYAVKAGLQKKVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYTHVT 281 Query: 181 AGRFYGIWDRARGR 194 I + R Sbjct: 282 REHLKDIHKKYHPR 295 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN---TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K L+ SE+ LL AA P A RN + L + G R +E+C L + + Sbjct: 142 PKLGRPLPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSV 201 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE----SEWVFLSRKGNP 115 D + + K G P+ + ++A+ +L S +FL+ +G Sbjct: 202 DAGLGYVRVL-GKGGKERIVPVGEQALEAISRYLKQGRPALARRQREVSPALFLNHRGRR 260 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+S A L I PH LRH+ L + G D R +Q+ LGH + T Sbjct: 261 LSVRGAQDILSRIADGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQI 320 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT +A R I+ + R Sbjct: 321 YTHVSAERLKEIYHKTHPRA 340 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 6/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K FL E+ LL+ R+ + L + G R +E+ L+ SD+DL Sbjct: 105 TPKIEKKLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDL 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE-----SEWVFLSRKGNPL 116 ++ + + K P+ AL+ +L+ +++ +++F++ KG PL Sbjct: 165 VSRFVIV-CGKGAKERIVPIGRTAAAALERYLADARPRLYSKWRKEQHQFLFINSKGGPL 223 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + II N ++ ++ PH +RH+ + N G D R +Q+ LGH N+ T Y Sbjct: 224 TDRSVRRIIDKYIANLAVAKKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLY 283 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R ++ R Sbjct: 284 THVTKERLKAVYRETHPRA 302 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 2/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K+ K L+ ++ +L+ T R+ + + G R SE+ + +SDID Sbjct: 98 PKSQKKLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTN 157 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQF 121 + + + K PL K ++AL W+ R + E++FL+++G L+ + Sbjct: 158 EQTLKVL-GKGNKFRIVPLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARAI 216 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + + + IHPH+LRHS + D R +Q+ LGH NI T YT + Sbjct: 217 QYRLKFWAQKNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLDF 276 Query: 182 GRFYGIWDRARGRQRHAV 199 I+D+A R + + Sbjct: 277 QHLSKIYDQAHPRSKKKI 294 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 282 bits (722), Expect = 6e-75, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + +L EIE +++A + P R+ + + + G R SE+C+L I D+D Sbjct: 107 TPRQWQTIPKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLD 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L+ + + K P+ V A++ +L S ++F++ +G ++R Sbjct: 167 LEYQVLR-TTGKGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTR 225 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ +++ G AG+ + PH+LRHS L G D R +Q LGH +I T YT Sbjct: 226 QGFWKLLAAYGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTH 285 Query: 179 SNAGRFYGIWDRARGRQ 195 R ++ R Sbjct: 286 VMRSRLRATVEKHHPRA 302 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 282 bits (722), Expect = 6e-75, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 1/195 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + L E+ LL + P A R+ + L + G R +E+ + + I L Sbjct: 106 PRKARPLPKNLDVDEMNQLLDVNDDDPLAIRDRAMMELMYGAGLRLAELVGIDVRHISLS 165 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K P + + WL +R + AE +F+S+ G +S + Sbjct: 166 KGDLRV-IGKGDKERVVPFSGLAREWVAKWLKLRDNIALAEEPALFVSKLGTRISTRNVQ 224 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G +S I+PH LRHS + D R +Q+ LGH N+ T YT + Sbjct: 225 KRMAEWGQKQAVSSHINPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQ 284 Query: 183 RFYGIWDRARGRQRH 197 ++D A R + Sbjct: 285 HLAKVYDEAHPRAKK 299 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 281 bits (721), Expect = 9e-75, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L E++ LL + R+ + L + G R SE+ RL++SDI+ + Sbjct: 102 PKLWLRLPKALEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFE 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-SEWVFLSRKGNPLSRQQ 120 A I + K P+ + + +KN+L +R + SE+VFL+ +G P++RQ+ Sbjct: 162 AGFIRVK-GKGDKERVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQR 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ I G AG+ + PHM+RHS L G D R +Q LGH +I T YT + Sbjct: 221 FWQNIKAIGRIAGV--NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVS 278 Query: 181 AGRFYGIWDRARGRQR 196 R + + R + Sbjct: 279 MDRLRKEYLKHHPRAK 294 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 281 bits (721), Expect = 9e-75, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 5/191 (2%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 ++ E++ L A + T P R+ + + + G R SE+ L+ + ++L+ + + Sbjct: 112 LPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV- 170 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRKGNPLSRQQFYHI 124 I K PL +Q LK +L+ + + +FL+ +G ++RQ+F+ I Sbjct: 171 IAYGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQI 230 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 I G AGL + PH+LRHS + + G D R +Q+ LGH +I T YT R Sbjct: 231 IRAYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRL 290 Query: 185 YGIWDRARGRQ 195 ++D+ R Sbjct: 291 KKVFDKTHPRA 301 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +++ N+ P RN L L + G R EI L ++D+DL Sbjct: 98 PKIPKTLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDL 157 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K PL + +LK +L +SE +FL+++G L+ + Sbjct: 158 TQGYVRVT-GKGRRQRIVPLGKYALDSLKLYLEAGRPAFKPKSEKLFLNQQGAGLTVRGI 216 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++IS AGL+ +I PH RHS L G D R +Q+ LGH+ + T YT + Sbjct: 217 RYLISQIVKKAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLSK 276 Query: 182 GRFYGIWDRARGRQRH 197 R ++ R R R Sbjct: 277 ERLREVYLRTHPRSRE 292 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E+ LL A A R+ + L + G R SE + + D+ L Sbjct: 118 PQRWRTLPEVLSVDEVTRLLAAPGLDERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVML 177 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + + + K P+ + A+ +L +FL+ +G PLSR Sbjct: 178 EDSLVRVL-GKGNKERLVPIGRSAIGAVAVYLRELRPVLERGGGKGILFLNGRGAPLSRM 236 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ G AG+ + PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 237 GAWKLVRKYVGMAGIEKPVSPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQIYTHV 296 Query: 180 NAGRFYGIWDRARGRQ 195 + + + R Sbjct: 297 DREYLRSVHRQFHPRA 312 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 280 bits (719), Expect = 1e-74, Method: Composition-based stats. Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 10/204 (4%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 A + +T E+ +L+AA T R+ L + G R SE L + DI Sbjct: 157 PPMAGKRLPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDIS 216 Query: 61 L------KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE---SEWVFLSR 111 L + I K PL + +AL+ +L A+ + +FL+ Sbjct: 217 LAGDDTEQGPAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKGTPALFLNA 276 Query: 112 KGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIR 171 +G +SRQ + I+ + A ++ ++ PH LRHS L G D R++Q+ LGH ++ Sbjct: 277 RGGRISRQSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVT 336 Query: 172 HTVWYTASNAGRFYGIWDRARGRQ 195 T YT A ++ A R Sbjct: 337 TTQVYTLVTADTLREVYAAAHPRA 360 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 280 bits (719), Expect = 1e-74, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 1/196 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + L E+ LL+ P A R+ + L + G R +E+ + + D+ L+ Sbjct: 113 PRKKRPLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLR 172 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + I + K P V+ + WL +R+ +F+S+ G +S + Sbjct: 173 SGEIRV-IGKGNKERKVPFAGMAVEWVGKWLKVRSGLADPSEPALFVSKLGTRISHRSVQ 231 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G ++ I PH LRHS + + R +Q+ LGH NI T YT + Sbjct: 232 KRMAEWGQKQAVASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQ 291 Query: 183 RFYGIWDRARGRQRHA 198 ++D+A R R Sbjct: 292 HLADVYDQAHPRARKK 307 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 KA+ K FL+ E+ LL + + R+ + + G R SE+ + DI+ Sbjct: 101 TPKAEKKLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDIN 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQ 119 I + K+ + + ++ L+ + R + FL+ KG +S + Sbjct: 161 WNYGEIRVF-GKRAKERIVIVGEETLKILQLYKDHVRPKLLKKPEKAFFLNAKGGRISDR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 II + + ++ PH LRH+ L G D R +Q+ LGH I T YT Sbjct: 220 AIRMIIKKYTKD--FNKKVSPHTLRHTFATHLLEGGADLRYVQELLGHVRISTTQIYTHL 277 Query: 180 NAGRFYGIWDRARGRQRHA 198 + + + + R Sbjct: 278 TSEQIRKTYTLSHPRAIKK 296 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 5/191 (2%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 L+ E+ L +A + P R+ + + + G R SE+ L++ ++L + + Sbjct: 109 LPKVLSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYV- 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW---VFLSRKGNPLSRQQFYHI 124 I K PL + ++ LK +LS + E+ +FL+ +G ++RQ+F+ + Sbjct: 168 IAYGKGAKERLIPLGHYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFWQL 227 Query: 125 ISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRF 184 I G ++ + PH+LRHS + + G D R +Q+ LGH +I T YT R Sbjct: 228 IKNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNHRL 287 Query: 185 YGIWDRARGRQ 195 I+D++ R Sbjct: 288 KAIYDKSHPRA 298 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 4/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +EI++L+ +T P R+ + L + G R SE+ LR+ + Sbjct: 98 TPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLH 157 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE--WVFLSRKGNPLSR 118 L + + K P+ + + +L + VF++ G+ L+R Sbjct: 158 LAMNLLQVT-GKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTR 216 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + + G+ ++ PH LRHS L G D R++Q+ LGH +I T YT Sbjct: 217 QVIWKNLKAYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTH 276 Query: 179 SNAGRFYGIWDRARGR 194 + ++ + R Sbjct: 277 LSNQHLVAVYHKTHPR 292 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 6/197 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAAN----TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 ++ + LT ++ L++A + P A R+ + L + G R SE L I I Sbjct: 131 RSGQSLPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSI 190 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSR 118 D + + K P+ + A+ WL R S + +FL+ +GN L R Sbjct: 191 DRNHAYVRV-VGKGRKERLVPIGAPALHAIDAWLVRGRPSMVKRSDKALFLNARGNRLGR 249 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + + GL + PH LRHS L G D R +Q+ LGH ++ T YTA Sbjct: 250 QSVWKFLHAAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTA 309 Query: 179 SNAGRFYGIWDRARGRQ 195 + ++ + R Sbjct: 310 VSIDNLREVYATSHPRA 326 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 278 bits (712), Expect = 9e-74, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 1/196 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K K L + + R+ L L + G R +E+ L + DID Sbjct: 108 PKTPKKLPKTLDVDQTAQFVAVEGDDFIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWG 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K + T P+ + + ALK+WLS R Y A +F++++G +S + Sbjct: 168 DAMVTVT-GKGSKTRTLPVGSVAIAALKDWLSQREQYAPASEPALFITQRGKRISHRAVQ 226 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 + G+ +HPHMLRHS + D RL+Q+ LGH NI T YT + Sbjct: 227 LRLQQLSVQQGMDNPVHPHMLRHSFASHMLESSGDLRLVQELLGHANISTTQIYTHLDFQ 286 Query: 183 RFYGIWDRARGRQRHA 198 ++D+A R Sbjct: 287 HLAKVYDKAHPRAGRK 302 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 3/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FLT ++ +L + + P A RN + + G R SE+C L ++++DL Sbjct: 120 PKLNRTIPEFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + K P + L +L R Y E +VF+S++G P++ + Sbjct: 180 NERILTVT-GKGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRA 238 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I++ +G +AGL+ +HPH+LRHS L + G+D R +Q+ LGH ++ T YT Sbjct: 239 VQLILAQAGQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVT 298 Query: 181 AGRFYGIWDRARGRQR 196 R D A + Sbjct: 299 VDRLKQSVDAAHPHSK 314 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 3/194 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 + LT E++ LL + N RN + L + G R SE+ L+ SDI+ Sbjct: 102 TPNLPENLPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDIN 161 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 L+ + I K P NK + +L R + + +F+SR G LSR + Sbjct: 162 LEDCFLRI-IGKGSKERLVPFGNKAKFFISIYLKKRRPCLNVN-DHIFISRLGKKLSRIE 219 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ + N G++ I PH LRHS L G D R +Q+ LGH +I T YT + Sbjct: 220 FWRQLKNIAKNVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLD 279 Query: 181 AGRFYGIWDRARGR 194 R + R Sbjct: 280 EDRIVQQHKKFHPR 293 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K + +IE LL AA+ RN + L + G R SE+ + ++ I+L Sbjct: 101 PKLWKKLPYVVPIHKIEDLLSAADVKTKLGIRNKAILELLYATGARVSEVATISLNGINL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH--AESEWVFLSRKGNPLSRQ 119 + I K PL K A++ +L+ S ++FLSR G PL R+ Sbjct: 161 EYGYIKCK-GKGSKERIVPLGKKASIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRE 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I+ AG++ I PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 NIWLIVKNCALKAGITEAISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHV 279 Query: 180 NAGRFYGIWDRARGRQ 195 N I + R Sbjct: 280 NKQHLKAIHQKFHPRA 295 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 276 bits (708), Expect = 2e-73, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L E++ L+ + R+ + L + G R SE+C L I ID Sbjct: 112 PKLWQLLPDILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSID- 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + I ++ K P+ ++ + A+ +LS+ R + + + +F++ +G + R Sbjct: 171 -DQYIRVY-GKGSKERIVPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTLRGKSMDRIS 228 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I AG++ I PH LRHS L N G D R+IQD LGH NI T YT + Sbjct: 229 IWRSIKEYAQQAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVS 288 Query: 181 AGRFYGIWDRARGRQR 196 + + R + + Sbjct: 289 SAHLQEAFHRFHPKWK 304 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 11/202 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG----PHAARNYCLTLLCFIHGFRASEICRLRIS 57 K + + L + +L++A P AR+ + L + G R SE+ L ++ Sbjct: 112 TPKREQRLPFHLNIDQTVTLIEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVA 171 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLS 117 D+D A + + + K G P+ + ++AL+ +L+ R A+ +FL +G ++ Sbjct: 172 DLDRAAGMVRV-QGKGGKERIVPVGSAALEALEQYLAGRGQL--ADDAPLFLGCRGARIN 228 Query: 118 RQQFYHIISTSGGNAGLS--LEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 R+ ++ +G+ I PH LRH+ + G D R IQ+ LGH ++ T Sbjct: 229 RRTVAQLVKRWA--SGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQK 286 Query: 176 YTASNAGRFYGIWDRARGRQRH 197 YT R ++D+A R R Sbjct: 287 YTHVGLDRLLEVYDKAHPRARE 308 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 276 bits (707), Expect = 3e-73, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L+ EI+ +L N AR+ + + G R SE+C+L+I D+D Sbjct: 100 TPKLWQLIPDVLSLEEIDRILAIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD 159 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K G P+ + + A+ +LS R ++ +E++F+++K PL+R Sbjct: 160 --DTFVRVL-GKGGKERIVPIGQQAIAAIDGYLSFREGGENSRNEFLFITKKSKPLTRAL 216 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + ++ A + I PH RH+ L + G D R+IQD LGH +I T YT + Sbjct: 217 VWKLVKFYARQASIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYTHVS 276 Query: 181 AGRFYGIWDRARGRQ 195 R + R Sbjct: 277 QIRLQQAFQAFHPRN 291 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + K FL EI LL+ + T R+ + + G R SE+ L ++ +D Sbjct: 113 TPKLEKKLPVFLEEFEINLLLRMPDCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVD 172 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT-----SYPHAESEWVFLSRKGNP 115 L + I K PL + V A++++L Y + VF++ +G P Sbjct: 173 LGNRYA-ILLGKGRKERLVPLGHPCVAAMEDYLRHSRGTLMEKYQAPRHQTVFVNSRGRP 231 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+ L + PH +RH+ L + G D R +Q+ LGH ++ T Sbjct: 232 LSARSVRRILDKYVEMTALQKHVSPHTIRHTFATHLLDHGADLRAVQELLGHVSLSTTQI 291 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT A R ++++ R Sbjct: 292 YTHVTAERLTAVYEKHHPRA 311 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 275 bits (706), Expect = 4e-73, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + LT EI LL A A R+ L L + G R SE+ L + +DL Sbjct: 118 PKASRRIPGTLTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDL 177 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEW-VFLSRKGNPLSRQ 119 + + + K P+ K ++AL +L+ R + + + +FL++ G PLSR Sbjct: 178 EHGFLRVF-GKGAKERVVPIGGKAIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRV 236 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ AGL+ + PH LRHS L + G D R IQ+ LGH +I T YT+ Sbjct: 237 MLWMLVKKYAKRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTSV 296 Query: 180 NAGRFYGIWDRARGRQR 196 + R D+ R R Sbjct: 297 ESQRLLEQHDKFHPRNR 313 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 13/197 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA--------ARNYCLTLLCFIHGFRASEICRL 54 K LT E++SL+ A R+ + + G R SE+ +L Sbjct: 133 PKRTKSLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKL 192 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 + DID + I + R K + N++ + +SE++F+++ G Sbjct: 193 QKKDIDFDERTIRV-RGKGEKDRIVLFDENTRDLIDNYIET----QNQKSEYLFINKNGR 247 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 L+ + +I AG+ ++ PH+LRHS L G+D R+IQ LGH ++ T Sbjct: 248 KLTPRYVQMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQ 307 Query: 175 WYTASNAGRFYGIWDRA 191 YT + ++D A Sbjct: 308 IYTNVDMDTIKSVYDHA 324 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 87/196 (44%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 ++ + L + LL A R+ + L + G R SE+ L + D+D Sbjct: 103 PPRSGRRLPRLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDF 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A +++ + K G + P+ K ++A+ WL R A +FLSR+G ++ + Sbjct: 163 GAGSVFVRKGKGGKARYVPVGAKALEAIGAWLEARRVLTGAGQPALFLSRQGRRIAPRTV 222 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + GLS +HPHMLRHS + D R +Q+ LGH + T YT + Sbjct: 223 EMRLERWRAKLGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDF 282 Query: 182 GRFYGIWDRARGRQRH 197 R ++D++ R R Sbjct: 283 QRLAAVYDQSHPRARR 298 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 275 bits (704), Expect = 7e-73, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 2/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+ E LL+ + P A R+ L L + G R +E L + +DL Sbjct: 104 PRRPRRLPGVLSPDEAARLLEGSPEDDPLALRDRALYELIYSSGLRLAEAVGLDLGRLDL 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K + P+ K +AL+ WL++R + A+ VF+S++G LS + Sbjct: 164 TEGLVEV-VGKGAKTRRVPVGGKAREALQAWLAVRPALAGADEPAVFVSQRGGRLSARSV 222 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ +G+ +HPHMLRHS L D R +Q+ LGH +I T YT + Sbjct: 223 QARLARLATLSGVGRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDF 282 Query: 182 GRFYGIWDRARGRQRHA 198 ++D+A R R Sbjct: 283 QHLARVYDQAHPRARKG 299 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 275 bits (704), Expect = 7e-73, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + L+ EI +L+++ A A RN L L + G R SE+ L + DI Sbjct: 162 PPAMPQHLPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDIT 221 Query: 61 L--KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNP-L 116 + I + K P+ + QA+ +L R +S +FL+ +G + Sbjct: 222 ALEETDGILVLTGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAM 281 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 SRQ + ++ + AG++ +I PH LRHS L G D R +Q+ LGH ++ T Y Sbjct: 282 SRQSAWQVVKQAATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIY 341 Query: 177 TASNAGRFYGIWDRARGRQ 195 T A +W A R Sbjct: 342 THITADSLRAMWRTAHPRA 360 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + K FL E+ LL+ + + R+ L + G R SE+ L ++ +D Sbjct: 104 TPKLEKKLPVFLEEFEMNHLLELPDLSTELGQRDRALLEFLYSTGCRVSELVGLTLTRLD 163 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT-----SYPHAESEWVFLSRKGNP 115 L + K PL + ++A+ +L+ Y +++F++ +G P Sbjct: 164 LSNRYAL-LLGKGHKERIVPLGHPCIRAMNAYLTGARRVLMEKYEVPSHDFIFVNHRGTP 222 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ + I+ A + + PH +RH+ L + G D R +Q+ LGH ++ T Sbjct: 223 LTARSVRRILDRYVEMASIQKHVSPHTIRHTFATHLLDHGADLRSVQELLGHASLSTTQI 282 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT A R ++ + R Sbjct: 283 YTHVTADRIASVYKKHHPRA 302 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + +++ LL+ + P R+ L L + G R SE+ R+ ++DL Sbjct: 120 PRTERYLPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 A+ I + K P+ K A++ +L VFLS +G L+ Sbjct: 180 DARIIRVT-GKGNKMRLVPVGQKACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTV 238 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + + I+ NAGL + ++PH+LRHS L + G D R+IQ+ LGH +I T YT Sbjct: 239 RIWQIVKACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHV 298 Query: 180 NAGRFYGIWDRARGRQR 196 + R + R R + Sbjct: 299 DQQRLKAVHHRFHPRAK 315 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ E+ SLL+ AAR+ + L + G R SE+ L ++ +DL Sbjct: 133 PKGEGYLPVVLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDL 192 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES------------EWVFL 109 + + K P+ V A++ +L R + + + + Sbjct: 193 ADGMVRV-VGKGNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLV 251 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 + +G L+ + ++ AG++ + PH LRHS L MG D R++Q+ LGH + Sbjct: 252 NSRGGRLTSRSIERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHAS 311 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQ 195 + T YT N ++D+A Sbjct: 312 LSTTQRYTHLNLDHLTAVYDQAHPLA 337 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 6/200 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + + + L+H+E+E LL T P R+ + + G R +E+ + D+DL Sbjct: 108 PRREKRLPGCLSHAEMEKLLSIPATTPLGLRDRAILETLYASGIRVAELVGMDQDDLDLV 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS-----YPHAESEWVFLSRKGNPLS 117 A + K PL V+AL+N+L E +FL+ G L+ Sbjct: 168 AGYARVL-GKGRRERVVPLGRYAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLT 226 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + +S A L + PH +RH+ L G D R++Q+ LGH + T YT Sbjct: 227 TRGVRERLSHYVEKAALRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYT 286 Query: 178 ASNAGRFYGIWDRARGRQRH 197 + + ++ + R Sbjct: 287 HISQSQLREVYRQFHPRASR 306 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + D K +FL E+ LL+A P R+ + + G R SE+ + D+DL Sbjct: 103 PRKDRKLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE------------WVFL 109 + I R K PL + ++A+K WL+ R + S VF Sbjct: 163 DEGVVRI-RGKGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFT 221 Query: 110 SRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 ++ G L+ + ++ GL L PH LRH+ L + G D R +Q+ LGH++ Sbjct: 222 NKFGKRLTTRSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKS 281 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQRHA 198 + T YT + +++RA R R+ Sbjct: 282 LVTTQIYTHVSTAALKAVYERAHPRARNK 310 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 6/197 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 K K +FL+ E++ L++ + AR+ + L + G R SE+ L DID Sbjct: 106 TPKLGRKLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDID 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + R K PL N ++A + +L +R + E + L+ +G LS + Sbjct: 166 AGSSLLRV-RGKGNKERIVPLTNYALEAARQYLEMRED----KQEALLLNYQGTRLSVRS 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I+ AGLS +HPHMLRHS L + G D R +Q+ LGH + T YT Sbjct: 221 IRRILDGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLT 280 Query: 181 AGRFYGIWDRARGRQRH 197 R ++++ R + Sbjct: 281 KERLREVYEQNHPRAKK 297 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + L+ EIE ++ P RN + + G R SE+ L+IS + Sbjct: 121 PKTKRQLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHF 180 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT---SYPHAESEWVFLSRKGNPLSR 118 A I + K P+ + V+ + + + + +FL+R+G+ L+R Sbjct: 181 DAGFIRV-VGKGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTR 239 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + +I AG+ ++ PH RHS L G D R +Q+ LGH +I T YT Sbjct: 240 VMIFLVIKELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTH 299 Query: 179 SNAGRFYGIWDRARGR 194 + R R Sbjct: 300 LDREYLRDTLQRFHPR 315 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ E++ LL TGP A R+ L L + G RASE +++ ++D+ Sbjct: 119 PPRGKKLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDV 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + K P+ +K + AL+++L+ E + VF++++G+ L+RQ Sbjct: 179 DDGILR-ANGKGNKERLVPIGSKALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQ 237 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Y I+ AGL ++ PH LRH+ L G D R +Q+ LGH +I T YT Sbjct: 238 GLYKIVQRHARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHL 297 Query: 180 NAGRFYGIWDRARGRQR 196 +A R ++ A R + Sbjct: 298 SAERLRDVYFDAHPRAQ 314 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + + L+ EI LL R+ + L + G R SE+ + D+D Sbjct: 107 TPRTEKYIPAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGINEEDMD 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE------WVFLSRKGN 114 I I R K P+ +A++ ++ + + +F++R+ Sbjct: 167 FSQGLIRI-RGKGKKERIVPIGQPASEAVQRYMMKKPGSETSGKAVATCPVPLFVNRRQG 225 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LS + I+S +GL +I PH LRHS L + G D R IQ+ LGH ++ T Sbjct: 226 RLSARSVARILSKYVSMSGLQKQISPHTLRHSFATHLMDAGADLRSIQELLGHESLSTTQ 285 Query: 175 WYTASNAGRFYGIWDRARGRQR 196 YTA + R ++DRA + R Sbjct: 286 KYTAVSVNRLMAVYDRAHPKAR 307 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 2/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + LT E+ ++L + + R+ + L + G R SE+C LR D D Sbjct: 123 PKLARNLPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDA 182 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 +A + + K P+ + + +L +FL+R G LSRQ Sbjct: 183 QAGVVRVF-GKGAKERIVPVHHVSCALVTAYLRDWRPAFSPVEPAMFLNRSGKGLSRQAV 241 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + ++ AG+ +I PH RHS L G D R +Q LGH +I T YT A Sbjct: 242 WKVVKRHVAEAGIHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQA 301 Query: 182 GRFYGIWDRARGRQRHA 198 R I + R R Sbjct: 302 DRLRRIHNAHHPRTRRP 318 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K N LT EI+ +L P A R+ + + + G R +E+C + SDI Sbjct: 101 TPKIPRKLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTELCDFKTSDIL 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLS 117 ++ I + + K P+ + LKN+L+ + ++ VFLSR G L+ Sbjct: 161 WDSEMIRV-QGKGSKQRFVPIGPIARENLKNYLNHERNTLADKNPNVAEVFLSRNGRKLT 219 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R + ++ +A + E+ PH LRHS L G D R +Q+ LGH +I T YT Sbjct: 220 RMMIWVLLKKWTESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQVYT 279 Query: 178 ASNAGRFYGIWDRARGR 194 + + R Sbjct: 280 HLDKEHLKEVHRTYHPR 296 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K LT E +LL + + AR+ + + G R SE+ L + + Sbjct: 116 VTPKRKKTVAAHLTVDEAFALLDSILDDSLAGARDRAMFECLYSTGIRVSELAGLNMGRV 175 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS--IRTSYPHAESEWVFLSRKGNPLS 117 + K + + K P+ K ++ +K + + + E VFL++ G L+ Sbjct: 176 NFSGKTLRVL-GKGDKERIVPVGAKALEHIKAYRDRLAVEGPKNPDPEAVFLNKNGGRLT 234 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ + GL+ + PH LRH+ + + G D R +Q+ LGH +I T YT Sbjct: 235 TRSIRRILEKIVRDMGLNRPLSPHGLRHTFATHMLDNGADLRSVQELLGHASISTTGRYT 294 Query: 178 ASNAGRFYGIWDRARGRQRH 197 + R +D+A R Sbjct: 295 HVSIDRLMAAYDKAHPRGEK 314 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 3/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K L+ E+ +L ++RN C+ L + G R SE+ L + D+++ Sbjct: 103 PKRDKKLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNI 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 K I + K P+ + + L+ ++ R + +F ++ G LSR++ Sbjct: 163 KMGFIKV-IGKGNKERMIPIGSYVGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREE 221 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FY I+ T + ++ ++ PH RH+ L G D R IQ+ LGH +I T YT + Sbjct: 222 FYSILQTIVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYTHIS 281 Query: 181 AGRFYGIWDRARGRQRH 197 + + + R + Sbjct: 282 NQKIRSEYQQFHPRIKK 298 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 KA K L E L++ P R+ L L + G R SE+C LR D+DL Sbjct: 127 PKAPRKLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLD 186 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + K G P+ + V AL+ W + + VF R G +S++ Sbjct: 187 SGLVTVL-GKGGKQRLVPVGSHAVAALRAW---QRDSGGSAQTHVFPGRAGGAISQRAVQ 242 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I G+ +HPHMLRHS + D R +Q+ LGH +I T YT + Sbjct: 243 IRIKQLAVRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQ 302 Query: 183 RFYGIWDRARGRQRHA 198 ++D A R + Sbjct: 303 HLAKVYDAAHPRAKRK 318 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 27/220 (12%) Query: 2 KNKADNKKRNFLTHSEIESLL------------------KAANTGPHA------ARNYCL 37 K + + L+ I L+ KA ++ RN + Sbjct: 103 TPKLEQHLPHVLSEGSISKLMGEGGDRDKEGPKPGKSSKKAGDSDSEGKDKGLLMRNMAM 162 Query: 38 TLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT 97 + + G R SE+ L++SDI + + + R K P+ ++ L+N+L Sbjct: 163 IEVLYGCGLRVSELVGLKVSDIIFETRTLRC-RGKGNKERIVPIGEYALEVLQNYLEHDR 221 Query: 98 SYP--HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMG 155 ++E +FL+ +G L+RQ + I+ G+ I+PH RHS L + G Sbjct: 222 ERLRGKHKTEVLFLNSRGTALTRQGIWDILKKWAQTHGVQENIYPHKFRHSFATHLLDHG 281 Query: 156 IDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 D R +Q+ LGH +I T YT + R ++ +A R Sbjct: 282 ADLRSVQEMLGHADIATTQIYTHLSRQRLLEVFRKAHPRA 321 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K ++ S++E+LL A + R+ + L + G R SE+ L + I Sbjct: 101 RTKIRRHLPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIA 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L + I K P + L+ ++ S++VF+S++G LSR Sbjct: 161 LDVGYVQIL-GKGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSR 219 Query: 119 QQFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 Q F++ + GL +I PH LRH+ L G D R IQ LGH ++ T YT Sbjct: 220 QAFWYRLKVYVCAVGLDSNKISPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYT 279 Query: 178 ASNAGRFYGIWDRARGRQ 195 R ++ + R Sbjct: 280 HIADQRLKSLFMKHHPRA 297 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K LT E E LL+A P R+ + L + G R SE+ L D++L Sbjct: 101 PKVEKKPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSR 118 + + ++G P + L +L S+ E+ +F +R+G +SR Sbjct: 161 ELHFLRCT-GERGKERILPFGGVTAEWLDLYLREGRSHLILDERENPALFPNRRGGRISR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q F+ ++ G AG++ +I PH LRHS L G D R +Q+ LGH + Y + Sbjct: 220 QGFWKLMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVS 279 Query: 179 SNAGRFYGIWDRARGR 194 + ++D R Sbjct: 280 RSRSNLKTVYDAFHPR 295 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + FL+ ++ +LL+ + H RN + + + G R SE+ L+ +DL Sbjct: 101 PKAGTRLPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 A + + K P + Q WL + + S ++F++R GNP++RQ Sbjct: 161 VACFVRLF-GKGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ ++ AG+S+++ PH LRHS L G D R +Q LGH +I T YT Sbjct: 220 GFWKLLKKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHV 279 Query: 180 NAGRFYGIWDRARGR 194 + + + R Sbjct: 280 SRQYLVDMHKKYHPR 294 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 7/203 (3%) Query: 1 MKN-KADNKKRNFLTHSEIESLLKAANT--GPHAARNYCLTLLCFIHGFRASEICRLRIS 57 +K K + L+ E+E+LL AA++ ++ R+ L + G R SE L + Sbjct: 115 VKPAKLPRRLPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLD 174 Query: 58 DIDLKAKCIYIHR-LKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEW--VFLSRKG 113 DID + + + K L ++ QAL+ +L +R + VFL+ G Sbjct: 175 DIDFETEPALVRLFGKGRKERISMLGHQACQALQAYLVRVRPTLAEKGQSRGRVFLNTYG 234 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 P+SRQ + II + A + +HPH LRH L G D R++Q+ LGH ++ T Sbjct: 235 KPMSRQTAWAIIQAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTT 294 Query: 174 VWYTASNAGRFYGIWDRARGRQR 196 YT + ++ A R R Sbjct: 295 EIYTKVSKQMLLEVYASAHPRAR 317 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 3/196 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + + + L+ EI L++A R+ + + + G R SE+ RL+++DID Sbjct: 129 RPRVGRRLPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADID 188 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE-SEWVFLSRKGNPLSRQ 119 + + K G PL + A+ +L +R ++P + ++ +FLS +G PL+RQ Sbjct: 189 RRKGIVM-ALGKGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQ 247 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + ++ G++ PH LRHS L G D R +Q LGH N+ T YT Sbjct: 248 AVWKLLGGYARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYTHL 307 Query: 180 NAGRFYGIWDRARGRQ 195 + RA R Sbjct: 308 ADDHVRAAYRRAHPRA 323 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 272 bits (697), Expect = 4e-72, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 79/197 (40%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K + L+ EIE +L A + + P RN + + G R SE+ L+IS++ Sbjct: 104 PKLGRKLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFF 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT---SYPHAESEWVFLSRKGNPLSR 118 + + K P+ + + + + +VFL+R+GN LSR Sbjct: 164 DDGFVKVL-GKGNKERLVPIGRDARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSR 222 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + II GL + PH RHS L G D R +Q+ LGH +I T YT Sbjct: 223 VMVFTIIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTH 282 Query: 179 SNAGRFYGIWDRARGRQ 195 + I R Sbjct: 283 LDRDYLQQIIKDFHPRS 299 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 272 bits (697), Expect = 5e-72, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 2/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + N L+ E+ LL + T R+ + L + G R SE+ + + D D Sbjct: 105 PKLPSLLPNILSQDEMLRLLTTPDITNKLGFRDKVILELLYASGIRVSELIGVHVLDFDQ 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 I + K G PL + ++ L +++ +++FL+R G L+RQ Sbjct: 165 DKGIIKVF-GKGGKERYIPLHSSAMKLLIHYVQKIRPMFTPIEKFLFLNRSGKGLTRQAI 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II A ++ I PH RH+ L G D R +Q LGH ++ T YT + Sbjct: 224 WKIIKRYALLASINKSISPHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHVQS 283 Query: 182 GRFYGIWDRARGRQ 195 R I R Sbjct: 284 DRLKYIHSMFHPRS 297 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K+ L +LL A A R+ + L + G R SE+ L ++D+ Sbjct: 118 PPKSPKTLPKALPVDATSALLDAPIDPEDDLALRDQAMFELLYSCGLRLSELTGLDLADL 177 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 DL + K + P+ + QAL+ WL+IR S P VF + G LS + Sbjct: 178 DLGEGLLT-AHGKGNKTRILPIGRQARQALERWLAIRPSQPG--EGAVFTGKSGRRLSGR 234 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q + G +HPHMLRHS L D R +Q+ LGH N+ T YT+ Sbjct: 235 QVEKRLEQWAQRHGSDRHVHPHMLRHSFASHLLQSSGDLRAVQELLGHANLSTTQIYTSL 294 Query: 180 NAGRFYGIWDRARGRQR 196 + ++D R + Sbjct: 295 DFQHLAKVYDATHPRAK 311 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 272 bits (696), Expect = 6e-72, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 3/198 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + T E+ +LL +T P RN + + G R SE+ +R+ DID Sbjct: 102 RPKYEVPLPKCFTEEEVRTLLSIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDID 161 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQ 119 LK + + K PL + ++A+ N+L +R + S + +FL++ G + Sbjct: 162 LKRGLVRVT-GKGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAFDTK 220 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q I+ + PH LRHS L + G D R IQ+ LGH + T YT Sbjct: 221 QLDIILKRYFELVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYTHI 280 Query: 180 NAGRFYGIWDRARGRQRH 197 + + + R + Sbjct: 281 SLEDIKEAYKKGHPRSKE 298 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 7/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K + LT E+ +LL A T R+ + + G R SE+ L + Sbjct: 107 PKLARYLPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELLGLSRLN 166 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPL 116 + + + + K P+ + +K +L R A S + +FL+ +G PL Sbjct: 167 LHMDDGFVRVF-GKGSKERLVPVGQTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGPL 225 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 SR ++I+ AG+ I PH RHS L G D R++Q+ LGH +I T Y Sbjct: 226 SRMAAWNIVREHAVIAGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIY 285 Query: 177 TASNAGRFYGIWDRARGR 194 T + + R Sbjct: 286 THIDRSFIKEVHKTFHPR 303 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D + +FL E++ L ++ + P RN + L + G R SE+C L+ SD+DL Sbjct: 104 PKQDKRIPSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDL 163 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE-----SEWVFLSRKGNPL 116 + +H K P + +AL +L A+ +VFL+++G PL Sbjct: 164 SMDTVLVH-GKGSKQRYVPFGSYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPL 222 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + I++ A +L IHPHMLRH+ L N G D R +Q+ LGH N+ T Y Sbjct: 223 TDRGVRFILTELMKKASGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQVY 282 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + + R Sbjct: 283 THVSKDSLRKTYMSHHPRA 301 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 6/201 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ + L+ SE+ LL GP R+ L + G RASE+ L + D+ Sbjct: 111 PKVPDRLPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFF 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLSR 118 + + K P+ + L ++L S+ V L+ +G LSR Sbjct: 171 AEGILRVM-GKGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSR 229 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ T+G G ++HPH LRHS + G D R IQ+ LGH +I T Y Sbjct: 230 QALHTIVRTAGATIG-RPDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYVH 288 Query: 179 SNAGRFYGIWDRARGRQRHAV 199 + + A R Sbjct: 289 VDRSHIREEYLAAHPRAHLKA 309 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K K FL E+E L+ + + + R+ + + G R SE+ L++ D+D Sbjct: 98 KPSKWEKLPVFLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMD 157 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNPLSR 118 + + + + K P+ + +K +L IR + W+FLSR G L R Sbjct: 158 MHREIMKVT-GKGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDR 216 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + + II AG+ + PH LRHS L G D R IQ LGH ++ T YT Sbjct: 217 EYVWMIIKKYCERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYTQ 276 Query: 179 SNAGRFYGIWDRARGRQRH 197 + R R Sbjct: 277 VTDNKARNTLLNCHPRFRK 295 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 270 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 4/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 K D K +FL +E++++ A +T ARN + L + G RASE L++ DID Sbjct: 106 TPKLDKKLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDID 165 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSR 118 L + + K P+ + V+AL +L RT+ PHA+S+ +F++ +G L+ Sbjct: 166 LDLSTLLVM-GKGKKERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTD 224 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I++ +A L+ ++ PH++RH+ + N G D R +Q+ LGH +++ T YT Sbjct: 225 RGLRKILAKVIEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTH 284 Query: 179 SNAGRFYGIWDRARGRQRH 197 R ++ + R + Sbjct: 285 VTRDRLRDVYRHSHPRAKK 303 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 270 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI--D 60 K+ L+ + ++ P + R+ + L + G R E+ L I D Sbjct: 120 PKSARALPQVLSPDQAVRMVDLPTDAPDSIRDKAMFELFYSSGLRLMELIDLDAESIRSD 179 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + A + + K + PL + AL WL++R + + +F+ +G +S + Sbjct: 180 ITAGEVRVT-GKGHKTRIVPLGGCAISALHEWLAVRPTLANIGERALFVGARGARISPRV 238 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + G G++ +HPHMLRHS + D R +Q+ LGH +I T YT + Sbjct: 239 VQLRMKQWGIKQGITSSVHPHMLRHSFATHVLQSSGDLRAVQEMLGHASISTTQVYTHLD 298 Query: 181 AGRFYGIWDRARGRQRHA 198 I+D A R + Sbjct: 299 FQYLSKIYDAAHPRAKRK 316 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 1/196 (0%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA + +IE LL + + + L + G R SE C L + + L Sbjct: 113 TKKAVQHLPVYFNMQDIERLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYL 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + K P+ + +AL+N+L+ +A S +VF++ KG ++RQ Sbjct: 173 EQGFLRV-IGKGNKERMVPMHARCKKALENYLTKVRKQRYARSNFVFINAKGQEITRQYI 231 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + +I GL + H RHS L + G D R++Q+ LGH +I T YT Sbjct: 232 HVMIKKRLLALGLDERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTTQIYTHVQN 291 Query: 182 GRFYGIWDRARGRQRH 197 R ++ R + Sbjct: 292 KRLQSVYTSFHPRAKK 307 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 3/196 (1%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K LT EI LL R + L + G R SE+ LRI ++ Sbjct: 96 LSPKLTQKIPETLTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVN 155 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--VFLSRKGNPLSR 118 LK K + K P+ ++ V+ L+ +LS R Y + +F+++ G +SR Sbjct: 156 LKDKWVL-AYGKGAKQRFIPIHDRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISR 214 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ G AG+ +HPH+ RH+ L G D R +Q+ LGH +++ T YT Sbjct: 215 MSVWKDVNDLGRLAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYTH 274 Query: 179 SNAGRFYGIWDRARGR 194 + + R Sbjct: 275 LDVQSLKEKHKKFHPR 290 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 6/195 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 K D K +FLT +E++ LL + P R+ + L + G R E+ L + +ID + Sbjct: 124 KKDKKVPSFLTENEMQMLLNLPDLKP---RDRAMIELFYSCGLRIEELVSLDLKNIDFIS 180 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES--EWVFLSRKGNPLSRQQF 121 + + K+ P+ + + A+K++++ R + VFLS + L ++ Sbjct: 181 NVVTVT-GKRNKERIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTA 239 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 I+ AG + ++ PH LRH+ + + G D R +Q+ LGH+N+ T YT Sbjct: 240 RRILHRYFVKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYTHVTI 299 Query: 182 GRFYGIWDRARGRQR 196 ++ R + Sbjct: 300 ESLKKVYKETHPRAK 314 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FLT E + L+ AAN G AR+ L L + G R SE+ L I DIDL Sbjct: 103 PKREKLLPKFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K P+ + ++ALK +LS R Y + +FL+R G L+ Sbjct: 163 NLGVVRVM-GKGSKERLVPITDLAIEALKEYLSTRGVYNSG--DPLFLNRLGGRLTGDGL 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 +++ A L+ ++ H LRHS + N G D R +Q+ LGH+++ T YT + Sbjct: 220 AYLVKNITIKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSL 279 Query: 182 GRFYGIWDRARGRQRH 197 R I+ + R + Sbjct: 280 DRLKKIYGQTHPRSKE 295 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 7/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN---TGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K +FL+ +E+++ LKA P RN + + + G R SE+ RL ++ + Sbjct: 102 PKLWRILPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAV 161 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY---PHAESEWVFLSRKGNPL 116 D + + + K + P+ ++ L+ +L+ + S +VFLS+ G PL Sbjct: 162 DFDNELLRV-VGKGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNPRSPYVFLSKSGRPL 220 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +R+ ++++ + AG+ IHPH LRHS L G D R+IQ+ LGH +I T Y Sbjct: 221 NREWIWNVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADISTTEIY 280 Query: 177 TASNAGRFYGIWDRARGR 194 T ++ R I + R Sbjct: 281 THIDSNRLAAIHHKFHPR 298 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 5/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + K LT E LL R+ + L + G R SE+ ++++D+++ Sbjct: 111 PHVEKKTPEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNM 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 + P + +ALK +L S ESE++F++ G +SRQ Sbjct: 171 AMGYVLCRDS--DKERVIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQ 228 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II AG++ +I PH LRHS G L G D R +Q+ +GH +I T Y Sbjct: 229 GFWKIIKFYSAQAGITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDM 288 Query: 180 NAGRFYGIWDRARGR 194 N R I+ +A R Sbjct: 289 NVRRVREIYAKAHPR 303 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + +FL EI LL + T RN + L + G R SE+ L++S+ID Sbjct: 108 KVAKRNPDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFN 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS---YPHAESEWVFLSRKGNPLSRQ 119 ++IH K P + + L ++ + +VF+++ GNPL+ + Sbjct: 168 QMVLFIH-GKGNKDRYVPFHDYAGEWLIKYIQEARENLMIKNEGHNFVFVNKFGNPLTNR 226 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +I+ + +IHPH +RHS L N G D R +Q+ LGH N+ T YT Sbjct: 227 GVENIVDRIMRLYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIYTHI 286 Query: 180 NAGRFYGIWDRARGRQ 195 + ++ +A R Sbjct: 287 SRDHLKEVYLKAHPRN 302 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 5/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLL--KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 + K L + + AA+T R+ + L + G R SE+C L + D Sbjct: 117 VSPKVTRNLPRVLGEVQAGEFMGSAAADTEDEFRRDSAILELLYATGMRVSELCGLDLGD 176 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 +D + + + K P AL+ WL R + +F+ +G + Sbjct: 177 VDHHRRMVRVL-GKGDKERMIPFGKAAADALEQWLEARDRMAKV-EDAMFVGVRGGRIDA 234 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +Q I+ + AG + PH LRH+ L + G D R +Q+ LGH +++ T YT Sbjct: 235 RQIRRIVDRTAQVAGAD-HLSPHSLRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTH 293 Query: 179 SNAGRFYGIWDRARGRQ 195 ++ R + +A R Sbjct: 294 VSSQRLLEAFRQAHPRA 310 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 12/206 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-----TGPHAARNYCLTLLCFIHGFRASEICRLRI 56 + LT E+ +LL++ GP RN L L + G R SE L + Sbjct: 112 PPTPGRRLPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDV 171 Query: 57 SDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS------IRTSYPHAESEWVFLS 110 D+D +A+ + + K G P+ VQAL +L R + +FL+ Sbjct: 172 DDVDTQARTVL-LQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLN 230 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G LSRQ + ++ + +AG++ + PHMLRHS L G D R++Q+ +GH ++ Sbjct: 231 ARGGRLSRQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASV 290 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQR 196 T YT +W A R + Sbjct: 291 TTTQIYTLVTVQALREVWAGAHPRAK 316 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 13/197 (6%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------TGPHAARNYCLTLLCFIHGFRASEICRL 54 K L E++SL+ A R+ + L + G R SE+ L Sbjct: 117 PKRTKSLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSL 176 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 RI+DID + I I R K L ++L R ESE++FL+R G+ Sbjct: 177 RINDIDPDERTIRI-RGKGDKDRIVLFDENTRDLLMDYLKRR----IHESEYLFLNRFGD 231 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 PL+ + +I AG+ ++ PH+LRHS L G+D R IQ LGH N+ T Sbjct: 232 PLTPRYVQMMIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQ 291 Query: 175 WYTASNAGRFYGIWDRA 191 YT+ + ++DRA Sbjct: 292 IYTSVDMQTLKNVYDRA 308 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 4/187 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ E+E L+ + +T P RN + + G R SE+ +++ +I+L Sbjct: 34 PKTGLSLPEVISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINL 93 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 +A I I K P+ + ++ ++NW+ + S ++F++R G P++RQ Sbjct: 94 EASFIRIF-GKGSKERIVPIGSFAIEKVRNWIMHGRPIILKNIPSHYLFVARAGKPMTRQ 152 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ ++ +G+S +I PH RHS L G D R +Q LGH +I T YT Sbjct: 153 GFWKLLKKYSRASGISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHV 212 Query: 180 NAGRFYG 186 + Sbjct: 213 SRDYLRK 219 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 5/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ ++E ++KA N + RN C+ + + G R SE+ L+IS+I+ Sbjct: 105 PKLGLYLPDTLSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINF 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE--SEWVFLSRKGNPLSR 118 K + + K S PL + +K ++ IR+ Y + + +FL+ +G+ +SR Sbjct: 165 KELYLKV-DGKGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSR 223 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + II AG++ +I PH RHS L G D R IQ+ LGH +I T YT Sbjct: 224 VIVFIIIKELTEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYTH 283 Query: 179 SNAGRFYGIWDRARGRQR 196 + R + Sbjct: 284 LKNEELRDVILNFHPRNK 301 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L E+ ++L + R+ + L + G R SE+C L + DID Sbjct: 103 PKLPKTLPKVLPVEEVFAILDMPDVKTVLGLRDRAILELLYGGGLRISELCGLDLLDIDR 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-----AESEWVFLSRKGNPL 116 + + + K P+ + ++AL+ +L+ R E +FL+ +G L Sbjct: 163 SGRIVRVM-GKGSKERLVPVNAQSIRALEAYLARRGELLATIRKDQAPEAMFLNFRGGRL 221 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + + T L+ ++ PH +RHS L G D R IQ+ LGH ++ T Y Sbjct: 222 TPRSIARHLDTYVLKCALTRKVSPHAMRHSFATHLLGGGADIRSIQELLGHSSLSTTQRY 281 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + ++D A R Sbjct: 282 TQVTWEQLQQVYDSAHPRA 300 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 4/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ + L ++ LL A +N+ P A R+ + L + G R +E+ L + ID Sbjct: 105 PKSGKRLPKALDVDQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNLDSID 164 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE-WVFLSRKGNPLSRQ 119 L + + K + P+ + A++ WL +R + + +F+S+ G LS Sbjct: 165 LHESQLLVT-GKGNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPS 223 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + GL +HPH LRHS L D R +Q+ LGH ++ T YT Sbjct: 224 SVQQRLKRHALERGLDAHLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHL 283 Query: 180 NAGRFYGIWDRARGRQRH 197 + ++D A R + Sbjct: 284 DFQHLAQVYDGAHPRAQR 301 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 5/197 (2%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPHA--ARNYCLTLLCFIHGFRASEICRLRISD 58 + K L + ++ A + R+ + L + G R +E+C + +SD Sbjct: 115 ISPKITRDLPKILGEQQAGDFVENAASTNEEEFLRDSAILELLYATGMRVAELCGIDLSD 174 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSR 118 ID K + + K P +AL+NWL +R + + +F+ +G ++ Sbjct: 175 IDYDRKMVRVL-GKGNKERVVPFGESAHKALRNWLDVRDEM-TEDPKALFVGVRGQRINA 232 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +Q I+ + G+ + PH LRH+ L + G D R +Q+ LGH +++ T YT Sbjct: 233 RQVRRIVDRAAKVTGVD-HLSPHSLRHTAATHLLDGGADLRQVQELLGHSSMQTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQ 195 + R +++A R Sbjct: 292 VSNKRLLEAFNKAHPRA 308 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 268 bits (686), Expect = 9e-71, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K ++ +LT ++ LL N P R+ + L + G R +E+ L I ++ + Sbjct: 102 PKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSV 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 + + + K P+ + ++ ++ S+ VF S++ ++RQ Sbjct: 162 QQGVVRV-IGKGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQ 220 Query: 120 QFYHIISTSGGNAGLSLE-IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+H + A + + + PH+LRH+ L N G D R++Q LGH ++ T YT Sbjct: 221 TFWHRVKHYAILADIDADALSPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTH 280 Query: 179 SNAGRFYGIWDRARGR 194 R + +R R Sbjct: 281 VAKERLKRLHERFHPR 296 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 4/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + ++LT EIE L + + R+ C+ L + G R SE C LR++D+D Sbjct: 103 TPEVMRSIPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMD 162 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNPLSR 118 L+ + + K G P K + L +L + E++F+S+KG+ ++R Sbjct: 163 LEGMTLTV-EGKGGRQRLVPFGEKSLDILNRYLKQSRPFILKSRNCEYLFVSKKGSYINR 221 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + + +++ + ++ PH LRHS L D + +Q+ LGH +I T YT Sbjct: 222 KSVWRLLNHYIKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYTH 281 Query: 179 SNAGRFYGIWDRARGR 194 + + R Sbjct: 282 MANKTLREVHKKFHPR 297 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ S+++ LL N P R+ + L + G R SE+ L + + L Sbjct: 106 PKLSRHLPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSL 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNPLSRQ 119 + + I K G P+ + ++++L+ +S+ VF S++ ++RQ Sbjct: 166 RQGLVRI-IGKGGKERLVPMGEMAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQ 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+H I AG+ E+ PH LRH+ L N G D R++Q LGH ++ T YT Sbjct: 225 TFWHRIKLYASRAGIETELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHV 284 Query: 180 NAGRFYGIWDRARGR 194 R + + R Sbjct: 285 ARARLQELHQQHHPR 299 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 267 bits (684), Expect = 1e-70, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 6/193 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K FLT E+ +LL + T RN + L + G R SE+ L + DID Sbjct: 109 PKLPRSIPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDR 168 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 ++ + + R K P+ ++ ++A+ ++ + E +FL+R + S Sbjct: 169 ESHLVRV-RGKGNRERLVPVGDRALKAVDDY----RTCIDGEFGALFLNRDAHRFSDSSI 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++S GL + + PH LRHS + + G D R IQ+ LGH ++ T YT Sbjct: 224 RRVLSVLVKACGLGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTHVTY 283 Query: 182 GRFYGIWDRARGR 194 R ++DRA R Sbjct: 284 ARLMEVYDRAHPR 296 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 29/222 (13%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN----TGPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K + L+ SE+E ++ AA T + R+ L + G R SE L+ D Sbjct: 115 PKQAEHLPDVLSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFED 174 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA---------------- 102 IDL + K P+ V+AL+++L+ + Sbjct: 175 IDLTESVVR-LSGKGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSP 233 Query: 103 --------ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANM 154 + +FL+++G LSRQ + IS +G A + E+HPH LRHS L + Sbjct: 234 LNSSSKSANTHVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISG 293 Query: 155 GIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 G D R +Q+ LGH ++ T YT + + + R R Sbjct: 294 GADVRTVQELLGHASVTTTQIYTHISPDALMEAYVMSHPRAR 335 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 5/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ K N L +I +L A + P A R+ + L + G R +E+ L + DID Sbjct: 108 PKSPRKLPNSLDPDQISQVLNATITSDDPMAMRDKAMLELTYSCGLRLAELASLNVFDID 167 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 L + + K + P+ + + ALK+WL R ++ +F++ +G + + Sbjct: 168 LTDASLIVT-GKGNKTRQLPIGRQAITALKSWLQQRGQLKCHDANALFINHRGQRMGVRG 226 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G IHPHMLRHS L D R +Q+ LGH NI T YT + Sbjct: 227 IQMRMANMAATHG--QHIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLD 284 Query: 181 AGRFYGIWDRARGRQRHA 198 ++D+A R + Sbjct: 285 YQHLAKVYDKAHPRAQEK 302 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 6/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 KA + L+ +E+E+ L A + R+ L + + G RASE+C LR+ D+ Sbjct: 128 TQKAWQRMPGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCRASEVCTLRVRDLT 187 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES----EWVFLSRKGNPL 116 L K + H K P+ + ++A++ +L + + +FLSR G L Sbjct: 188 LDEKTLRCH-GKGDKQRMVPIGGRAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKAL 246 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 R Q + ++ AG+S EI PH LRHS L G D R +Q+ LGH +I+ T Y Sbjct: 247 DRIQLWRLVKRYAKRAGISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIY 306 Query: 177 TASNAGRFYGIWDRARGRQ 195 T R + R Sbjct: 307 THVEHSRLQRVHRDFHPRA 325 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K FL+ E+E L+ A P R+ + + + G R E+ L + ++DL Sbjct: 101 TPKKERKLPEFLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQNLDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAE-----SEWVFLSRKGNP 115 + + + K PL + + A++++L + R + +FL++ G Sbjct: 161 QTGYLKVT-GKGNIERLAPLGSFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTR 219 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +S++ + + PH LRHS L G D R +Q+ LGH NI T Sbjct: 220 ISQRSIRRRVKKYVQQTASEHRVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQI 279 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT N R ++++ R Sbjct: 280 YTHVNQARMTEVYNKYHPRA 299 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K L+ E+E+LL + +TG R+ + L + G R SE+ L++S+++L Sbjct: 98 PKGVRKLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNL 157 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 A + K P+ A +L S +FLSR G +SRQ Sbjct: 158 SAGYLM-TIGKGDKERLVPMGESACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQ 216 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F++II AG+ I PH LRHS L G D R +Q LGH ++ T YT Sbjct: 217 AFWNIIKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHV 276 Query: 180 NAGRFYGIWDRARGR 194 R + R Sbjct: 277 TRERMKKLHADFHPR 291 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L+ +++E+LL A G R+ + L + G R SE+ L+ ++ L Sbjct: 148 KQPARFPATLSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGLN 207 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQ 120 + + K P ++ +L S+ +F++ +G ++RQQ Sbjct: 208 DGVVRVM-GKGSKERLVPFGEVAHGWIERYLREARPALLGARTSDALFVTARGEGMTRQQ 266 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F++II A + + PH LRH+ L N G D R++Q LGH +I T YT Sbjct: 267 FWNIIKRHAMRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVA 326 Query: 181 AGRFYGIWDRARGR 194 R + R Sbjct: 327 RERLRTLHAAHHPR 340 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA NK L+ E+ L+ A P R+ L + G R SE C L +S + L Sbjct: 107 PKAVNKLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCRVSEACDLELSSLHL 166 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSR 118 + + K PL + + AL WL VF++++G+ LSR Sbjct: 167 DQGLV-VLTGKGSKQRMVPLGDCALVALLAWLEEGRPELVARAPREAHVFVNKRGSRLSR 225 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + + +AG++ +I PH LRHS L G D R +Q LGH +I T YT Sbjct: 226 QGCFFRLRQHAVSAGITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTH 285 Query: 179 SNAGRFYGIWDRARGRQ 195 + +D R Sbjct: 286 LSQSHVRHAYDLHHPRA 302 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 1/196 (0%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + I LL P R+ + L + G R E+ L DI L Sbjct: 123 PKQAKPLPKNIDVDAISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLG 182 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + + K G P+ ++AL W + R A+ +F+S +G LS + Sbjct: 183 LQEVKVL-GKGGKERRVPVGKLAMEALALWHTQRLLLVQADEPALFVSNQGKRLSHRSIQ 241 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G N LS+ +HPH LRHS + D R +Q+ LGH N+ T YT+ + Sbjct: 242 ARMAKWGQNQALSVPVHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTSLDFQ 301 Query: 183 RFYGIWDRARGRQRHA 198 ++D A R + Sbjct: 302 HLAKVYDGAHPRAKKG 317 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 4/196 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K N L+ +E E+LL A +T R+ + L + G R SE+ L + +D Sbjct: 101 RPKPQRKLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLD 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 + + + K P+ + + + +FLS +G ++R Sbjct: 161 EENGFVRV-IGKGNKERIVPMGEAATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTR 219 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+HI+ A + + PH +RH+ L N G D R +Q LGH +I T YT Sbjct: 220 HNFWHIVKRYAYEANIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTH 279 Query: 179 SNAGRFYGIWDRARGR 194 R + D+ R Sbjct: 280 VANARLKKLHDQLHPR 295 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 266 bits (681), Expect = 3e-70, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 ++ FLT EIE LL+A P R+ + L + G R SE+ L++ Sbjct: 109 PSIQSRLPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLESYYP 168 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 + I + K P+ +AL +++ + VFL+++G PL+R Sbjct: 169 EHFQIKVL-GKGNKERAVPIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRS 227 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + +I G+ +++PH+LRH+ L G D R+IQ+ LGH NI T YT Sbjct: 228 RIRQLIIHYARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHV 287 Query: 180 NAGRFYGIWDRARGRQ 195 N I R R Sbjct: 288 NLKHLKEIHRRCHPRS 303 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 266 bits (681), Expect = 3e-70, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 6/193 (3%) Query: 9 KRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 F EIE + + + RN L + + G R SE+ L + +DL I Sbjct: 108 LPEFFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIIL 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE----WVFLSRKGNPLSRQQFYH 123 + K P+ + AL+ +L A+ +VF++ G+PL+ + Sbjct: 168 V-IGKGSKERYVPIGDFARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGVRY 226 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 I+ +GL+L+IHPHMLRH+ L N G D R +Q+ LGH ++ T YT Sbjct: 227 ILEKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYTHVTKEA 286 Query: 184 FYGIWDRARGRQR 196 + R + Sbjct: 287 LQQNYQLYFPRSK 299 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 4/194 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L+ +++E+LL A + T P R+ + L + G R +E+ L+ ++ + Sbjct: 116 KQPLRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMN 175 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQQ 120 + I K G + P + ++ +L + +F++ +G ++RQ Sbjct: 176 EGVLRIT-GKGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQM 234 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ +I A ++ + PH LRH+ L N G D R++Q LGH +I T YT Sbjct: 235 FWTLIKKHAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVA 294 Query: 181 AGRFYGIWDRARGR 194 R + R Sbjct: 295 RERLKHLHQIHHPR 308 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 7/199 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHA----ARNYCLTLLCFIHGFRASEICRLRIS 57 + L+ +E+ ++L++ A R+ L + + G R SE+ L + Sbjct: 106 RPGQAASIPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVD 165 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPL 116 D+D K I + R K P+ + + AL+++L +R ++ S +FL+R G + Sbjct: 166 DVDPTEKLIIV-RGKGSKERVVPVGDPALDALQHYLVRVRPAFNKKGSAALFLNRNGGRM 224 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 RQ ++++S+ AG+ + PH RHS L G D R++Q+ LGH N+ T Y Sbjct: 225 GRQSAFNMVSSVSEKAGV-AGVSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIY 283 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + W + R Sbjct: 284 TKVSPDHLREAWSESHPRS 302 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 6/197 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + + + +I+ LL A + P+ R+ L + + G RASE+ LR+ D+ L Sbjct: 96 KIWRRIPSVIAPHKIDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLRMDDVHLD 155 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES----EWVFLSRKGNPLSR 118 + K PL K + +K +L ++ ++FLSR G LSR Sbjct: 156 EGYVKC-EGKGSKQRIAPLAQKSARVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSR 214 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++ AG+ ++ PH LRHS L G D R +Q+ +GH +I T YT Sbjct: 215 IAIWELVKKYAARAGIDPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTH 274 Query: 179 SNAGRFYGIWDRARGRQ 195 + R + + R Sbjct: 275 VDQSRLKKVHAQYHPRA 291 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K + + LT E+ LL + P RN + L + G R SE+ + + D++ Sbjct: 118 RIKLGVQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLN 177 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L + I +H K P ++ + +L +SE +FL+ +G +SR Sbjct: 178 LTERVILVH-GKGSKQRYVPYVDTLDELFAKYLKQSRPILLKLKQSELLFLNNRGERMSR 236 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 F+ I+ + A + E+ PH RHS L G++ R++Q LGH +I T YT Sbjct: 237 MGFWKILRKAVLEANIKKEVTPHTFRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTH 296 Query: 179 SNAGRFYGIWDRARGRQ 195 + R + R Sbjct: 297 IDMKRLVETYKEYHPRA 313 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA---NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K F +E+E LL+AA + AR+ + + + G R +E+C + +S Sbjct: 99 PKKKQSLPTFAVPTEVEQLLEAASRQDDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSF 158 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 D +++ K P+ VQAL+ ++ +R +FLS+KGN ++ Sbjct: 159 DEVLSFVHVM-GKGKKERYVPIGQYAVQALQRYIELRKGVGLPTETALFLSQKGNRMTTD 217 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q +++ ++G+ + PH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 218 QIRYVMKRLRKDSGVHKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHV 277 Query: 180 NAGRFYGIWDRARGR 194 + R I+ R Sbjct: 278 STERLRSIYQATHPR 292 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 2/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA-ARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + F E+E+L K R+ + L + G R SE+ ++ DID Sbjct: 100 PKKEKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDF 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A + + K P Q+++N+L +++ L+ KG ++ + Sbjct: 160 YANGVTVL-GKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLILNMKGEAITERGV 218 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++++ EIHPH LRH+ L N G D R +Q LGH N+ T YT + Sbjct: 219 RYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSN 278 Query: 182 GRFYGIWDRARGRQRH 197 + ++ A R + Sbjct: 279 QQLRKVYLNAHPRAKK 294 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 10/201 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + L+ E+ +L + A R+ L + G R SE C L +SD+D++ Sbjct: 103 KVPSGIPKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDME 162 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW--------VFLSRKGN 114 ++ + + K P + AL+ WL +W VFL +G Sbjct: 163 SQLVRLF-GKGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGT 221 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LSRQ + I+ A + E+ PH+LRHSC + G D R++Q+ LGH ++ T Sbjct: 222 RLSRQAAWRIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQ 281 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT + + ++ + R Sbjct: 282 VYTRVDNEVLFDMYKESHPRA 302 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 264 bits (677), Expect = 9e-70, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIES-LLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + FL E+E LL P R+ + L + G R SE L + D Sbjct: 105 PKQKTRLPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWDR 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESE--WVFLSRKGNPLSR 118 ++ + + K P+ V A+++++ R A +FL+ +G LS Sbjct: 165 VSETVRVF-GKGRKERYVPVGKMAVSAVESYIHEARPKLLRANDPTSHLFLNYRGGALSD 223 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I+ A + +I PH +RHS L N G D R +Q+ LGH++++ T YT Sbjct: 224 RSIRKIVEKRLDEAAMQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTH 283 Query: 179 SNAGRFYGIWDRARGRQ 195 + R Y ++ A R Sbjct: 284 VSKERLYAVYKGAHPRA 300 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA+ + + + +E+E LL + + P + R+ + L + G R SE+ L + D+ Sbjct: 102 PKAEKQLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQF 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K + P+ + ++ ++ R E+E +FL+ +G LSRQ Sbjct: 162 ELGYLQC-EGKGERARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQG 220 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 F+ +I AG+ EI PH+LRHS L G D R IQ LGH ++ T YT N Sbjct: 221 FWKMIKRRAKLAGIEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVN 280 Query: 181 AGRFYGIWDRARGRQ 195 R + ++ + R Sbjct: 281 KSRLHDVYRKHHPRA 295 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 4/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D + +L E+ +L+ A R+ L + G R SE L I D+DL Sbjct: 103 PKRDRRLPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 A + K G + + V AL+ +L +R VF++R+G L+ + Sbjct: 163 SAGFARVL-GKGGRERYVMVGRRAVDALRRYLPLRDRMAR--CSAVFINRRGGRLTDRSV 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ IH H LRHS + N G D R +Q+ LGH ++ T YT ++ Sbjct: 220 RRVLERRIQEVPGLRSIHVHGLRHSFATHMLNGGADLRSVQELLGHASLSSTQIYTHTSR 279 Query: 182 GRFYGIWDRARGRQRHA 198 + + A R R Sbjct: 280 EQLARAYYAAHPRARRG 296 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+ ++ +LL GP RN C L + G RASE+ L D L Sbjct: 117 PGVPARLPDVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLRASELSGLDAGDAFL 176 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE---SEWVFLSRKGNPLSR 118 + I K P+ + L ++L + + V L+ +G LSR Sbjct: 177 DEGILRI-VGKGSRERIVPIGGSAARCLASYLEDARPLLRSPRRLTPAVMLNARGGRLSR 235 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ +G G+ ++HPH LRHS L G D R IQ+ LGH +I T YT Sbjct: 236 QSIHSIVREAGHVIGI-KDLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTH 294 Query: 179 SNAGRFYGIWDRARGRQR 196 + + A R + Sbjct: 295 VDRTHVREEYLSAHPRAK 312 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLL--KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K+ +K + L+ E LL ++ A R+ + L + G R +E+ +L+ +DID Sbjct: 121 PKSPHKLPHALSPDEAAQLLTFNPSSNDMLATRDLAIFELFYSSGLRLTELTQLQPTDID 180 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K + P+ ++AL+ WL +R+++ +FLS++G + + Sbjct: 181 FTGGTVRVT-GKGNKTRIVPVGELALRALQAWLPLRSAWLIPGETALFLSQRGRRIHPRT 239 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + L +HPH LRHS L D R +Q+ LGH +IR T YT + Sbjct: 240 IAYRLHQRAQLQNLDSRVHPHTLRHSFASHLLQSSGDLRAVQEMLGHSSIRSTQVYTHLD 299 Query: 181 AGRFYGIWDRARGRQRHA 198 I+D+A R R Sbjct: 300 FQHLAKIYDQAHPRARKK 317 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 5/197 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K I +LL A + P R+ + L + G R SE+ L +SDID Sbjct: 112 PKKEQKAFKVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSELVGLNLSDIDF 171 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH---AESEWVFLSRKGNPLSR 118 I + R K P+ + ++ + ++L ++ + ++E +F+++ G+ L+ Sbjct: 172 GGMRILV-RGKGKKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTD 230 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + I+ AGL ++ PH RHS L G D R IQ LGH ++ T YT Sbjct: 231 RSVRRIVEKYLKIAGLPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTH 290 Query: 179 SNAGRFYGIWDRARGRQ 195 N ++D Sbjct: 291 LNLTELLRVYDATHPFA 307 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-----HAARNYCLTLLCFIHGFRASEICRLRIS 57 + + + +L A R+ + L + G R +E+ L I Sbjct: 110 KRQPRPLPGMVDIETVHQILDQAPPDKPIEQQLWLRDKAILELLYSSGLRLAELQGLMIK 169 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNP 115 DID + + I K + P K +L WL I + VF+S++GN Sbjct: 170 DIDFNRQLLRIT-GKGNKTRIVPFGQKAKDSLIEWLKIYRIWQGEFNLDSAVFISQRGNR 228 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ +Q + + AG+++++HPH+LRH + + D R +Q+ LGH N+ T Sbjct: 229 LTPRQIENRVKLQAQRAGVNVDLHPHLLRHCFASHMLSASGDLRSVQEMLGHSNLSTTQI 288 Query: 176 YTASNAGRFYGIWDRARGRQRH 197 YT + + ++D+ R + Sbjct: 289 YTHVDFDQLARVYDQTHPRAQK 310 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 12/201 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG--------PHAARNYCLTLLCFIHGFRASEICRL 54 + FLT +++ LL+ R+ + L + G R SE+ L Sbjct: 104 PRRKKTLPVFLTLNQMLELLELPYKTAVPANAPAWLPYRDAAILELFYSCGMRLSELVGL 163 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 + +D + + + + K P+ + AL+ ++S+ ++ +F+SR G Sbjct: 164 DVGSVDHRFRGVKVM-GKGRKERILPVGTPALAALETYVSMAC---LPKNSPLFVSRIGT 219 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LS + +++ + + I PH +RH+ + G D R +Q+ LGH ++ T Sbjct: 220 RLSARSVQMMLNKYVKLSSIPFTISPHKIRHTFATHILEAGADLRSVQELLGHASLSTTQ 279 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT R ++ +A R Sbjct: 280 IYTHVTRARMAEVYRQAHPRA 300 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 6/198 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + F +E+++L + A P RN L + + G R SE L +SDID Sbjct: 105 KKKNLRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDF 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP----HAESEWVFLSRKGNPLS 117 ++ + IH K PL + AL+ + H E + VF++ G P++ Sbjct: 165 DSEVMLIH-GKGNKERYAPLGSFAQDALQEYFREGRQVLMTKYHEEHDIVFVNHHGKPIT 223 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 ++++ + L +IHPHMLRH+ L N G D R +Q+ LGH N+ T Y Sbjct: 224 PTGIEYVLNQMIKKSSLDSDIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQIYA 283 Query: 178 ASNAGRFYGIWDRARGRQ 195 + R Sbjct: 284 HVTKESLQKNYRSFHPRA 301 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+H E++ LL A + R+ + L + G R SE+ L+++D++L Sbjct: 120 PRPGRRLPGLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNL 179 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSRQ 119 + + + + R K P+ A+K +L++ S+ +F++ +G ++RQ Sbjct: 180 ETRVL-VARGKGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQ 238 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F I+ AG+ I PH LRHS L G D R +Q+ LGH ++ T YT Sbjct: 239 GFAKILDRCARRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHV 298 Query: 180 NAGRFYGIWDRARGRQ 195 + ++DR R Sbjct: 299 DRTHVKRLYDRFHPRA 314 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L + L++ P R+ L + + G R SE L + +DL Sbjct: 110 PKLPKVHPKVLNVDQAIHLVETEITLDPEGLRDLALLEVLYGSGLRVSEALGLDFAHVDL 169 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQ 120 K + + K PL + L ++ R ++ P A + VFL ++G LSR+Q Sbjct: 170 DQKLVRVL-GKGRKERLVPLTGPAAERLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQ 228 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I+ +G I PH LRHS + G D R +Q+ LGH I T YT + Sbjct: 229 ADRIVKEMAVRSGAPCSISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHLD 288 Query: 181 AGRFYGIWDRARGRQRHA 198 + ++D A Sbjct: 289 LAQVMRVYDAAHPLAAKK 306 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 3/193 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +LT EI+S+ ++A G + R+ L L + G R SE +++S IDL Sbjct: 103 TPKLGHYLPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDL 162 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + K PL +K + L+ W+ H ++ + L+ G P+SR Sbjct: 163 ENEWLM-PIGKGNKQRLVPLGSKAKENLRAWIEEGRPLTHPTTDNIILNAHGKPMSRMGA 221 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + I+ LS ++ PH RHS G+D R++Q+ LGH +I T YT + Sbjct: 222 WKIVQ--LHTMHLSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDK 279 Query: 182 GRFYGIWDRARGR 194 R Sbjct: 280 DFIKQEHRSFHPR 292 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 16/209 (7%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTG------------PHAARNYCLTLLCFIHGFRA 48 M K + L+ S+ E L+ + RN + + + G R Sbjct: 100 MTPKIPDTLPAVLSESQAEKLMDCVDEQMPKSRTKSVRKQAVGLRNAAMLEVLYATGIRV 159 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EW 106 +E+ L + D+ + + + K P Q+++ WL R A S + Sbjct: 160 AELVGLDVHDVAFDNRTMKVT-GKGNKQRVVPFGVPAEQSIRRWLEDGRPRLVRARSADA 218 Query: 107 VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLG 166 +FL +GN + ++ ++ AG+ +I PH LRHS L + G D R +Q+ LG Sbjct: 219 LFLGAQGNRIDQRVVRQVVHECAQRAGVP-DISPHALRHSAATHLLDGGADLRQVQELLG 277 Query: 167 HRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 H +++ T YT + + + +A R Sbjct: 278 HSSLKTTQRYTHVSIEQLKARYGQAFPRA 306 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISD-ID- 60 K L LL+ R+ + + + G R SE+ L +S +D Sbjct: 120 PKQPKALPKSLDVDLTRQLLEQPLKTWQDVRDQAIFEILYSGGLRVSELVELDLSPGLDG 179 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 L + + + K P+ +AL WL IR+ Y + VF++R G L + Sbjct: 180 LASGWVRVL-GKGQKERDAPVGQPAQKALHRWLEIRSDYAQPGEQAVFVNRFGKRLGVRS 238 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + AGL ++ PH LRH+C + D R +Q+ LGH N+ T YT + Sbjct: 239 IQTQLDKRTLQAGLPTKMSPHRLRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLD 298 Query: 181 AGRFYGIWDRARGRQRHA 198 ++D+A R + Sbjct: 299 LQHLATVYDKAHPRAKKK 316 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + LT E+E LL + R+ + + + G + +E+ L I DI+L Sbjct: 99 PKIRRNFPDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINL 158 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 K I +K P+ + V+ L+ +L +RT +++F + +G+ ++RQ F Sbjct: 159 KLSYIKCRGIK-NKERIIPMGSYAVKCLEIYLKVRTKLNVQNIDYLFFNLQGDKMTRQGF 217 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + II +G+ +I+ + LRHS L G D + IQ+ LGH ++ T Y+ Sbjct: 218 WKIIKQYAQESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMYR 277 Query: 182 G-RFYGIWDRARGRQ 195 R ++ + R Sbjct: 278 KTRIAEVYKKTHPRA 292 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K +K +F E+ L +A G RN + + + G R SE L+ SDID Sbjct: 101 KKQSDKLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDID 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNW----LSIRTSYPHAESEWVFLSRKGNPL 116 + I + K P +AL+N+ S +VF++ P+ Sbjct: 161 FSMQTILVL-GKGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHNFVFINHYAKPI 219 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + +I++ + L+ +IHPHMLRHS AL N G D R +Q+ LGH ++ T Y Sbjct: 220 TTTGIEYILNQVITASSLNGKIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQIY 279 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + + + R Sbjct: 280 THVTKEKLQESYRKYFPRS 298 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 3/191 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + +FL + EIE+LL + + RN + L + G R SE+ L+I D+DL Sbjct: 100 KRQGRHLPHFLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLT 159 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPH-AESEWVFLSRKGNPLSRQQ 120 + + + K V L ++L++ R +P+ +++E VFL+++G PL+ + Sbjct: 160 ERSLRV-IGKGNKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRG 218 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 HI+ G AGL +++HPHMLRHS L + G R++Q LGH ++ T YT + Sbjct: 219 IQHILEHQGKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVS 278 Query: 181 AGRFYGIWDRA 191 + ++D A Sbjct: 279 MQKIKEVYDDA 289 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 261 bits (669), Expect = 8e-69, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI-- 59 K+ + L+ + +L++ R+ + L + G R SE+ L + + Sbjct: 117 PKSPKRLPKALSVEQAVALMEQLPGDDAETIRDRAVNELFYSCGLRLSELVSLDMRHVKA 176 Query: 60 ---------DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-----E 105 DL+A+ + + K T P+ K +AL WL++R +++ Sbjct: 177 GAYESASWLDLEAREVQVL-GKGSKRRTVPVGTKATEALAAWLAVRAQLAKSDAAPEDAH 235 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 +FLS +G L+++Q + + AG+ ++HPH+LRHS + D R +Q+ L Sbjct: 236 ALFLSPRGKRLAQRQIQLRMKRNAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELL 295 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 GH +I T YT+ + I+D+A R + Sbjct: 296 GHASIASTQVYTSLDFQHLAKIYDQAHPRAKKK 328 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGP-----HAARNYCLTLLCFIHGFRASEICRLRIS 57 + + + +L R+ + L + G R +E+ L I Sbjct: 107 KRQPRPLPGMIDIETVNQILDQPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIK 166 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA--ESEWVFLSRKGNP 115 DID + + I K + P K ++L NWL I + ++ VF+S++G Sbjct: 167 DIDFNRQLVRIT-GKGNKTRIVPFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGA 225 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ +Q + AG+++++HPH+LRH + + D R +Q+ LGH N+ T Sbjct: 226 LTPRQIEKRVKLQAQRAGVNVDLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQI 285 Query: 176 YTASNAGRFYGIWDRARGRQRH 197 YT + ++D+A R Sbjct: 286 YTHIDFDHLAQVYDQAHPRATK 307 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 3/197 (1%) Query: 4 KADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + +FL+ E++ LL + P N + L + G R SE+C L ++ + L+ Sbjct: 102 KNETYLPSFLSVEEVKQLLNSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQLE 161 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I K P+ N+ V+ L +L+ IR + ++ F++ GN ++ + Sbjct: 162 TGILRIL-GKGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNRITARSI 220 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ G +I PH LRH+ L G D R+IQ+ LGH NI+ T YT Sbjct: 221 QLLLKQKAMECGFQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTTEIYTHVQN 280 Query: 182 GRFYGIWDRARGRQRHA 198 + + + + Sbjct: 281 RQLFEAYQNFHPLSKKK 297 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 7/198 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN----TGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA K +T ++ SL+ PH AR+ + L + G R SE+ L + Sbjct: 109 TPKAPKKLPEVMTADQVNSLIDGVGGVELERPHPARDRAIFELLYGCGIRVSELAGLNLE 168 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLS 117 DID + + R K PL + Q+L+ +L+ R E VF++ + L+ Sbjct: 169 DIDRTEGWLRV-RGKGKKERQVPLPGQAAQSLERYLAERP--VAREQPAVFVNHRRARLT 225 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 + I+ IHPH RH+ L G D R IQ+ LGH + T YT Sbjct: 226 TRGISGIVKLYATYLSNDPGIHPHSFRHAYATHLLADGADLRAIQELLGHARLSTTQKYT 285 Query: 178 ASNAGRFYGIWDRARGRQ 195 + ++D+A + Sbjct: 286 QVSLTDLMAVYDKAHPKA 303 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + LT +I L + R+ + + G R+SE+ L I+L Sbjct: 111 PKFEKELPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLSELMINL 170 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + + + K + + ++ + R Y + VF++ +G ++ + Sbjct: 171 EEREVRVL-GKGNKERVTFFSENARKWYEKYISAKRNEYKNYTPNIVFVNSRGERITTRS 229 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +I+ AG++ E+ PH+ RHS L N +D R +Q+ LGH +I T YT + Sbjct: 230 LRRLIADYAEKAGINKEVTPHVFRHSFATTLLNNKVDIRYLQELLGHSSISTTQVYTHVS 289 Query: 181 AGRFYGIWDRARGRQ 195 I+ +A Sbjct: 290 KALLREIYIKAHPLA 304 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 260 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 3/193 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDID 60 K + LT EI+ ++ A +T R+ + + + G R SE+ LR+ D+ Sbjct: 107 TPKFGRHLPDILTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLF 166 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ 120 I + K P+ + ++ +L R + + S+ VFL+ +G L+R Sbjct: 167 FGEGYIRVT-GKGDKQRLVPVSGAAREKIQRYLDDRAT-KTSASDVVFLNNRGTQLTRVM 224 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I+ + AG+ I PH RHS L G R +Q+ LGH +I T YT Sbjct: 225 VFTILREAVHRAGIDKHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYTHLE 284 Query: 181 AGRFYGIWDRARG 193 ++ Sbjct: 285 GDHLRDTVEKYLP 297 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 4/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E++ + + + + P RN + + F G R SE+ L++S++ L Sbjct: 107 PRLGEHLPEVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYL 166 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT--SYPHAESEWVFLSRKGNPLSRQ 119 I + K P+ K ++ L W R E ++VFL+R+G L+R Sbjct: 167 DEGFIRVT-GKGNKERLVPISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRT 225 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 ++ AG+ I PH LRHS L G D R IQ LGH +I T YT Sbjct: 226 MILIMLKRQAQEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYTHI 285 Query: 180 NAGRFYGIWDRARGRQRH 197 + R Sbjct: 286 DTTTLREEILLHHPRNAK 303 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 6/196 (3%) Query: 3 NKADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ +E+E LL A A RN+ + L + G R SE+ +L ++ ++ Sbjct: 162 PKIGRALPKVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN 221 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSR 118 +A + I K P QA+ +++ + S+++F++ +G ++R Sbjct: 222 -QAGHLRIL-GKGSKERLVPFGEAARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTR 279 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 +F+ I+ S G++ EI PH+LRHS L G D R +Q LGH +I T YT Sbjct: 280 LRFWQIVRKSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTH 339 Query: 179 SNAGRFYGIWDRARGR 194 + R I + R Sbjct: 340 VDTNRLKAIHRKFHPR 355 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 3/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + + L P R+ + L + G R +E+ + I D+ Sbjct: 101 PKKAKRLPKNIDVDSLNHFLDQMPEDEPIEVRDKAMMELLYSSGIRLAELSAMDIDDLSF 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY-PHAESEWVFLSRKGNPLSRQQ 120 + + + K P N + L WL R ++ +++ + +FLS++GN L+ + Sbjct: 161 SDQSLRVL-GKGNKVREVPFGNSSKKVLSLWLKERNNFAKNSDEKALFLSQQGNRLTNRA 219 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ G GL+ +HPH LRHSC + D R +Q+ LGH +I T YT + Sbjct: 220 IQQRLAHWGKKLGLNDRLHPHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLD 279 Query: 181 AGRFYGIWDRARGRQRHA 198 +D A R R Sbjct: 280 FQHLAKTYDAAHPRARKK 297 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 10/201 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------TGPHAARNYCLTLLCFIHGFRASEICRL 54 K + + FLT ++ LL A R+ + L + G R SE+ L Sbjct: 126 PKLEKRLPKFLTEEQMVRLLAGPQQLLASESIDAFTAHRDRLVLELLYGAGLRVSELTGL 185 Query: 55 RISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGN 114 IDL+A I K P+ V L+ + A V ++++G Sbjct: 186 NYGAIDLEAGVARI-VGKGRKERLCPIGRVAVAVLRKFRDEFAP-ATAPDAPVIVTQRGT 243 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 +S ++ ++ A L +++ PH LRHS L N G D RL+Q+ LGH + T Sbjct: 244 RMSPREVQLMLKRYLALAELPMDLTPHKLRHSYATHLLNAGADLRLVQELLGHAQLATTQ 303 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT + R I+ +A R Sbjct: 304 VYTHVSVARLKEIYAKAHPRA 324 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 18/213 (8%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + ++ +I+ LL + RN + + G R SE+ I D+ Sbjct: 224 PPKNVKRLPKAVSVEDIQRLLAVPDRETATGLRNRAILEFLYATGARVSEMLNADIDDVH 283 Query: 61 LKA-------------KCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYP--HAES 104 + + + K P+ + +A++++L R S + Sbjct: 284 FEGTLTDEDGNQITLPGYVRLF-GKGNKERLVPIGSYAQKAIQDYLVRARPSLVAHGKGT 342 Query: 105 EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDY 164 +F++ +G L RQ + I+ + AGLS + PH +RHS L G D R++Q+ Sbjct: 343 AALFVNGRGGRLGRQGAWLILKEAAEAAGLSSDFSPHSMRHSFATHLLQGGADIRVVQEL 402 Query: 165 LGHRNIRHTVWYTASNAGRFYGIWDRARGRQRH 197 LGH +I T YT ++ A R Sbjct: 403 LGHASIATTQVYTKVTPEGLMEVYRMAHPRAHE 435 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 19/210 (9%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-----------NTGPHAA----RNYCLTLLCFIHGFR 47 K + + FLT ++ LL A P +A R+ + + G R Sbjct: 130 PKMEKRLPKFLTAQQMVELLGAPLKPLATPKKKGPGRPISATVCYRDVAILETIYSCGLR 189 Query: 48 ASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWV 107 SE+C L DID + + + R K P+ + A++N+ S P S V Sbjct: 190 ISELCGLTAQDIDWNEQLVRV-RGKGKKERQVPIGEPALTAIRNYWSTLEQSPGGGSP-V 247 Query: 108 FLSR--KGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 FL K LS + + AGL + PH LRHS + + G D R +Q+ L Sbjct: 248 FLGETEKAAALSPRVLQQRLKKYLALAGLDPSLTPHKLRHSYATHMLDAGADLRSVQELL 307 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YT + R +D A R Sbjct: 308 GHAHLITTQVYTHVSTERLKRAYDSAHPRA 337 >UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWI0_9PROT Length = 299 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 4/191 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + ++ ++E LL A T P R+ C+ L + G R SE+ L +++ Sbjct: 108 RKSRPLPKMMSEHDVERLLAAPETEDPVGLRDRCMLELLYATGVRVSELVSLTRGQVEMD 167 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 A + + K P + Q L+ WL +R S ++F R G+ ++RQ F+ Sbjct: 168 AGLLRV-IGKGDKERLIPFGEEAGQWLQQWLLLRP--AKPASPYLFAGRGGHAMTRQNFW 224 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I AG+ PH LRH+ L N G D R +Q LGH ++ T YT + Sbjct: 225 LRIKRYATMAGIMPLPSPHTLRHAFATHLLNHGADLRAVQMLLGHAHVTTTEIYTHVSRA 284 Query: 183 RFYGIWDRARG 193 R + + + + Sbjct: 285 RMHDLVNHSHP 295 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K LT ++E LL R+ L + G R SE + +S + + Sbjct: 15 PKIPETLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSSFESE 74 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K P+ +A++ WL R + ++ +F+++ G +S + Sbjct: 75 LSFVKVL-GKGKKERMLPVGKFAKEAIEKWLVERE-HIAKDTNALFINKYGKRISIRAMQ 132 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I GLS + PHMLRHS + D R IQ+ LGH ++ T YT N Sbjct: 133 ERIYNISIAQGLS-PVSPHMLRHSFATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQ 191 Query: 183 RFYGIWDRARGRQRH 197 + I+DR+ + Sbjct: 192 QLAKIYDRSHPHGKK 206 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K LT +++ LL A ++ P AR+ + L + G + SE+ L I DI L Sbjct: 101 PKPERKPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 + + + G P+ +++ ++ + + +FL+ G L+RQ Sbjct: 161 EMRFLRCAVS-GGKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQ 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II G AG+ +I PH LRHS L G D R +Q+ LGH + T Y S Sbjct: 220 GFWKIIKKYGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMY-QS 278 Query: 180 NAGRFYGIWDRARGRQ 195 ++D R Sbjct: 279 AKKSMKEVYDHYHPRS 294 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 7/188 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + +L+ E++ L++A++ P R+Y + L G R SE+C L+I D+D Sbjct: 99 PKRPRQMPKYLSEDEVKRLIEASSENP---RDYAIISLLAYSGLRVSELCNLKIEDVDFN 155 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + +Y+H K + + ++AL+N+L R + E++F S+K N +SR Q + Sbjct: 156 ERIVYVHSGKGDKDRIVVVSPRVIEALQNYLYTRED----DMEYLFASQKSNKISRVQVF 211 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I+ AG+ E+ PH+LRH+ L G+D R IQ +LGH ++ T YT + Sbjct: 212 RIVKKYAEKAGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDA 271 Query: 183 RFYGIWDR 190 ++D+ Sbjct: 272 LLKSVYDK 279 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 4/197 (2%) Query: 5 ADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 F E+ L + A R+ L + + G R SE+ L + ++L+ Sbjct: 132 KKKTLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSELSLERLNLE 191 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQF 121 + I + K PL + QA++++LS R S ++ L+ KG P+S +Q Sbjct: 192 VQLIRVL-GKGNKERIVPLGDSATQAIRDYLSHLRPKIDRNNSPYLLLTDKGAPMSPRQI 250 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + + ++L+I+PH LRHS L N G D R +Q+ LGH N+ T YT Sbjct: 251 RTRLKSLVEEQAMNLKIYPHKLRHSFATHLLNKGADLRTVQELLGHANLSSTQIYTHVTK 310 Query: 182 GRFYGIWDRARGRQRHA 198 + + +A R + A Sbjct: 311 DQLRSQYLKAHPRAKQA 327 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 21/216 (9%) Query: 1 MKN-KADNKKRNFLTHSEIESLLKAANT-----------------GPHAARNYCLTLLCF 42 + KAD ++ ++I+ L KA AAR+ + + + Sbjct: 100 LPPIKADQPLPLVMSINQIDLLTKAVGEYWEMAAANGISKSDEAAEFAAARDLAMVEVIY 159 Query: 43 IHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA 102 G R SE L + DIDL + R K L +AL+N+ +R++ Sbjct: 160 SGGLRISETTGLDMGDIDLIGGIARV-RGKGKKERIAVLGRPSQKALRNYFKLRSTVGGG 218 Query: 103 ESE--WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL 160 + VFL++ G L+ + F + A L ++ PH LRHS L + G D R Sbjct: 219 RAPGSPVFLNKFGKRLTPRSFQRNLKNYLIAANLPPDLTPHKLRHSFATHLLDAGADLRS 278 Query: 161 IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 +Q+ LGH N+ T YT +A R ++ A R + Sbjct: 279 VQEMLGHENLSTTQIYTHVSAERMKEVYKEAHPRAK 314 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 15/209 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--------------NTGPHAARNYCLTLLCFIHGFRA 48 + + + L E +LL +A R+ L L + G R Sbjct: 165 PRQEKRHPRALNVDETFALLDSATGPGGKRGPVAGSAEEERILCRDLALAELLYGSGLRI 224 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVF 108 SE L + D+ L ++ + + K PL + LK WL R + +F Sbjct: 225 SEALSLDVDDVQLSSRVLRVM-GKGSRERLAPLSDTSFSCLKAWLEERPLLALPDEAALF 283 Query: 109 LSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHR 168 + +G L+R++ I+ AGL+ + PH LRHS L G D R +Q+ LGH+ Sbjct: 284 VGARGARLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHLLEAGADMRSVQELLGHQ 343 Query: 169 NIRHTVWYTASNAGRFYGIWDRARGRQRH 197 + T YT + +D+A R Sbjct: 344 RLTTTQRYTQVSLESLMQTYDQAHPRSGK 372 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ ++ LL A + R+ + + + G R +EI L ++ + L Sbjct: 121 PKLWKYLPKVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKL 180 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRKGNPLSR 118 K L V A++ +L + + +FL+R G LSR Sbjct: 181 TEGYARC-VGKGNKERMVSLNPVAVAAVEAYLRHERPVLTRRNTTEQALFLNRGGKQLSR 239 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 ++I+ + G S E+ PH LRHS + G + R +Q+ LGH NIR T YT Sbjct: 240 VMVWNIVKKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRALQELLGHANIRTTQIYTH 299 Query: 179 SNAGRFYGIWDRARGR 194 + R + R Sbjct: 300 VDHSRLKAVHQMYHPR 315 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 9/202 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT----GPHAARNYCLTLLCFIHGFRASEICRLRISD 58 K + + L+ E+ +++AA + R+ L + G R SE ++ D Sbjct: 119 PKQADYLPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFED 178 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWV---FLSRKGN 114 IDL + + K P+ V+AL+N++ R + FL+++G+ Sbjct: 179 IDLNESVVKLT-GKGSKQRLVPIGGCAVRALRNYMEKSRPELALKGKRELHTIFLNKRGS 237 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 LSRQ + I++ +G A L +HPH LRHS L G D R +Q+ LGH ++ T Sbjct: 238 ALSRQSAWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQ 297 Query: 175 WYTASNAGRFYGIWDRARGRQR 196 YT + + + R + Sbjct: 298 IYTHISPDALVEAYVMSHPRAK 319 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + K +T EI+ L+ + + + RN + + G R SE+C L++S++ Sbjct: 106 PQTGFKLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETLYSCGLRVSELCNLKLSELYF 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 + I + K P+ + ++ ++ + + R ++VF+S G +SR Sbjct: 166 EEGFIKV-EGKGSKQRLVPISPRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRI 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +HII GL +I PH RHS L G + R IQ LGH +I T YT Sbjct: 225 MVFHIIKELAARIGLKKKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHI 284 Query: 180 NAGRFYGIWDRARGRQ 195 + R Sbjct: 285 DRNMLRSEIIEHHPRN 300 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D +T +I LL A +T PH R+ L L + G R SE RL ++D Sbjct: 114 PPKIDKNIPTLITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFGNLD 173 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSR 118 L CI K P+ + V ++ + + +F+S+K +SR Sbjct: 174 LDRGCIT-TLGKGNKQRIVPMGRESVYWVERYYKEARPLLLKGRSCDALFVSQKKTGISR 232 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 233 QLAWMIVKEYASQAGIE-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTH 291 Query: 179 SNAGRFYGIWDRARGRQ 195 R + + R Sbjct: 292 VANVRLHSVVKEHHSRN 308 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 258 bits (660), Expect = 9e-68, Method: Composition-based stats. Identities = 56/230 (24%), Positives = 83/230 (36%), Gaps = 35/230 (15%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA----NTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 + L I LL AA GP R+ L L + G R SE+ L + Sbjct: 124 PPTPARRLPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVD 183 Query: 58 DIDLKAK-----------------------CIYIHRLKKGFSTTHPLLNKEVQALKNWLS 94 DIDL + K P+ + ++AL+ +L Sbjct: 184 DIDLGPGRLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLV 243 Query: 95 IRTSYPHAESEW-------VFLSRKGNPLSRQQFYHIISTSGGNAGLSLE-IHPHMLRHS 146 A +FL+ +G LSRQ + +++ + AGL + PH LRHS Sbjct: 244 RGRPVLAAAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHS 303 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 L G D R +Q+ LGH ++ T YT ++ A R R Sbjct: 304 FATHLLEGGADVRSVQELLGHASVTTTQIYTLVTVDALREVYVTAHPRAR 353 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 12/203 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + LT S+IE+LL A + P RN + L + G R SE+ L ++ ++ Sbjct: 122 PVLPHPLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQ 181 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---------WVFLSRK 112 + + I K G PL + L+ +L A+ +F++ Sbjct: 182 RQGVLRIT-GKGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTN 240 Query: 113 GNPLSRQQFYHIISTSGGNAGL-SLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIR 171 LSRQQF+ I G+ ++ PH+LRHS L N G D R +Q LGHR+I Sbjct: 241 LKRLSRQQFWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSIS 300 Query: 172 HTVWYTASNAGRFYGIWDRARGR 194 T YT + + R Sbjct: 301 TTQIYTLIARQHLQQLHAQHHPR 323 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K++ K +T ++I++LL A + H R+ L + + G R +E +L +SDIDL Sbjct: 100 PKSERKLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDL 159 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLSRQ 119 I K PL + ++ + + + VF+S+K + +SRQ Sbjct: 160 HRGSIR-TIGKGDKLRLVPLGQEAAYWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I+ AG+ + PH LRH+ L N G+D R +Q LGH +I T YT Sbjct: 219 LAWMIVKEYAEAAGI-ASLSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIYTHV 277 Query: 180 NAGRFYGIWDRARGRQ 195 R + D R Sbjct: 278 ANIRLKNMVDEHHSRS 293 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 11/193 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT E+ +L R+ + LL + G R SE+C L+ SD+D Sbjct: 89 PPKVPKSLPKSLTREEVRKILSVIPPTK--KRDRLIFLLLYGAGLRVSELCNLKKSDVDF 146 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNP---LSR 118 + I + K P+ ++ +K +L R +SE++ + + LS Sbjct: 147 ERSLIIVRGGKGAKDRVVPIPAFLLEGIKAYLETRDD----DSEYLIVEDRRERKDKLSP 202 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + ++++ G AG+ + PHMLRHS + G+D R IQ+ LGH N+ T YT Sbjct: 203 KTVWYLLKKYGDRAGI--RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTK 260 Query: 179 SNAGRFYGIWDRA 191 ++A Sbjct: 261 VTVEHLRKAQEKA 273 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 2/196 (1%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L + +L+ R+ L + + G R SE L + DIDL Sbjct: 102 PPKKSARLPRTLPPEQTAALM-QPTHASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + + K PL L WL R + VFL+R G L+ + Sbjct: 161 HSCELRVL-GKGSKQRIVPLPTTAADLLGQWLDERLLGLVRDERAVFLNRFGQRLTARSV 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 ++ T +G + + PH LRHS L G+D R IQ+ LGH ++ T YT + Sbjct: 220 QRMLKTRALESGADISVTPHRLRHSFATHLLAGGVDLRAIQELLGHASLATTERYTHLDI 279 Query: 182 GRFYGIWDRARGRQRH 197 + ++DR+ R Sbjct: 280 AKLTEVYDRSHPRAGR 295 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 11/205 (5%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISD- 58 K+ + LT S+I S++ A P AR+ + L + G R SE+ + ++D Sbjct: 103 PQKSARRLPKALTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDL 162 Query: 59 --IDLKAKCIYIH--RLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESE---WVFLS 110 ID + R K PL + +A++N+L +R S+ +FL+ Sbjct: 163 SSIDTSDGKVTTLKLRGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLN 222 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +G+ +SRQ + ++ + AG++ + PH+ RHS L N G D R++Q+ LGH ++ Sbjct: 223 SRGSRISRQSAWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASV 282 Query: 171 RHTVWYTASNAGRFYGIWDRARGRQ 195 T YT + + R Sbjct: 283 TTTQIYTLITIDKVRESYALTHPRA 307 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKA-----ANTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 ++ + + LL R+ + L + G R E+ L I Sbjct: 141 KRSPRPLPSIADVDLLTQLLDQEIPDTPEQARLWLRDKAMFELLYSSGLRVGELVALDIV 200 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRK-GNPL 116 D+DL + + K + PL K A++ +L R + + +F+S K G L Sbjct: 201 DVDLADLRVRVT-GKGNKTRLVPLGIKAADAIRRYLPHRNLWVEQMDQALFISEKLGTRL 259 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 S + + + AG++ ++PH+LRH + + D R +Q+ LGH +I T Y Sbjct: 260 STRAVQQRLKVAATRAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIY 319 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + + ++DRA R H Sbjct: 320 THVDFAKLTQVYDRAHPRATH 340 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 4/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L+ EI LL P + + L + G R +E+ +R+ + L Sbjct: 112 PRRWKRLPKALSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLHL 171 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEW-VFLSRKGNPLSRQ 119 + I + K P+ +K VQAL+ +L R S VFL+ +G P + Sbjct: 172 EVGFINV-IGKGNKERVVPVGSKAVQALQRYLESGRPKLVTPRSPANVFLTMRGTPFAAV 230 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + I +G++ + PHMLRHS L G D R+IQ+ LGH NI T YT Sbjct: 231 TLWKRIKDRVKRSGVARNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHV 290 Query: 180 NAGRFYGIWDRARGR 194 + R + + R Sbjct: 291 SGSRLREVHRKFHPR 305 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + L+ + LL A P R+ L L + G RASE+ + + D+ Sbjct: 116 TTKTAATIPDVLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCRASEVSVMEVRDLR 175 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-----EWVFLSRKGNP 115 ++ + + R K PL + + A++ +L A+S W+ LS +G Sbjct: 176 IEDRF-CLARGKGSKERLVPLGDPALAAVEAYLEHERPKLAAKSKQGVPPWLLLSSRGQR 234 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+RQ+ + ++ G + PH LRHS L + G D R +Q+ LGH +I T Sbjct: 235 LTRQKIWELVKQYALRCGAPASMSPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQI 294 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT + R I + R Sbjct: 295 YTHVDQSRLKKIHSQFHPRA 314 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 4 KADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + LT +E++ LL N R+ + L + G R SEIC L+I DI + Sbjct: 95 RLKRVLPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFE 154 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY--PHAESEWVFLSRKGNPLSRQQ 120 K + I K P+ ++ + L+ ++ ++ +FL+ +G+ +SR Sbjct: 155 GKYLKI-CGKGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVG 213 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + I+ + + + I+PH LRHS L G D R +Q LGH +I T YT + Sbjct: 214 IWKIVKEAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVD 273 Query: 181 AGRFYGIWDRARGR-QRHA 198 + + + +HA Sbjct: 274 SAHLKKQIAK-HPKHSKHA 291 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 5/199 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + L + +L P A R++ L L + G R SEI L D+ Sbjct: 137 PPKQPQRIPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDV 196 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 L +++ K PL K +ALKN+L +R + ++ + +F R G LS++ Sbjct: 197 YLDEAWVHVT-GKGRKQRQVPLTGKSAEALKNYLPLRQT--ASDGKALFTGRNGTRLSQR 253 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q ++ G + PHM+RHS L D R +Q+ LGH ++ T YT Sbjct: 254 QIQKRLAQWAAINGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKL 313 Query: 180 NAGRFYGIWDRARGRQRHA 198 + ++D A R + Sbjct: 314 DFDHIARLYDEAHPRAKRQ 332 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 13/204 (6%) Query: 3 NKADNKKRNFLTHSEIESLLK-----AANTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 + D L + +L A P A R+ + + G R SE+CRL I Sbjct: 126 PRPDKTLPRVLAADQTAEILHNLEVGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIG 185 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE------SEWVFLSR 111 D+D + + I K P ALK W+ I A E VFL + Sbjct: 186 DLDFARQTVTIL-GKGNKQRVVPFGESAAHALKRWIDIGRPAIAANGHHKDADEAVFLGK 244 Query: 112 KGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIR 171 +G + +Q ++ + ++ PH LRHS + G D R++Q+ LGH ++ Sbjct: 245 RGGRIDPRQVRTVVHQATSTVS-GGDVSPHALRHSAATDVLEGGADLRVVQEMLGHASLA 303 Query: 172 HTVWYTASNAGRFYGIWDRARGRQ 195 T YT ++ R ++++A R Sbjct: 304 TTQIYTHVDSERLKAVFNQAHPRA 327 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 30/223 (13%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAA-----------------------RNYCLT 38 KA FL ++ ++L + A R+ + Sbjct: 115 TPKAKKTLPTFLNETQTQTLFDEILDHFNEAFYHDNRAKKHEKVNTLEWDFRYNRDRAIL 174 Query: 39 LLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS 98 + + G R +E+ L I ++D + + + K PL + LKN+L I+ Sbjct: 175 EMFYSCGLRLAELIGLNIMELDFQNGFVKVL-GKGRKQRIIPLGESAQKTLKNYLEIKKK 233 Query: 99 Y------PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALA 152 + E E VF++ KG + ++ + PH+LRH+ L Sbjct: 234 FFEMKRSNVLEREAVFVTEKGKRVYPVLVQRLVKKYLSPVTEQKKKSPHVLRHTFATHLL 293 Query: 153 NMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 N G D R + + LGH N+ T YT + R ++ +A + Sbjct: 294 NNGADLRSVSEMLGHSNLSTTEIYTHISFERLKQVYQQAHPKA 336 >UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV23_9GAMM Length = 345 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-----NTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 +A L + LL A + R+ + L + G R E+ L +S Sbjct: 146 KRAPRPLPTLLDIDVLSQLLDQAAPEDSHEARLWIRDKAMLELLYGSGLRVGELVGLNMS 205 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRK-GNPL 116 DID + + + K G + P+ K QAL N+L R+ + + VF+S + G + Sbjct: 206 DIDKSQRLLRVL-GKGGKTRIVPIGEKAWQALINYLPHRSLWVEEQDPAVFVSERYGTRI 264 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 S + I AG++ +++PH+LRH + + D R +Q+ LGH +I T Y Sbjct: 265 STRTVQLRIKLQAKRAGVAQDLYPHLLRHCFASHILSDSGDLRGVQELLGHSDISTTQIY 324 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + G ++D+A R R Sbjct: 325 THLDFGHLSQVYDKAHPRSRR 345 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 17/210 (8%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGPH------------AARNYCLTLLCFIHGFRA 48 M +K N + L + ESL+ ++ + RN + L + G R Sbjct: 115 MTSKIKNMLPSVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRV 174 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS---YPHAESE 105 E+ L I DI+ + I + K P +AL W+S ++ E Sbjct: 175 GELTSLNIQDINFSSHTIKVT-GKGNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEE 233 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 VFL +G + ++ I+ +A + +I PH LRHS + N G D R +Q+ L Sbjct: 234 AVFLGTRGKRIDQRLVRQIVHDEAKSAHVP-DISPHALRHSAATHMLNGGADLREVQELL 292 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YT + + +A R Sbjct: 293 GHSSLNTTQRYTHVSIESLKRKYSQAFPRA 322 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 5/197 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D +T +I LL A +T PH R+ L L + G R SE L ++D Sbjct: 97 PPKIDKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVD 156 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSR 118 L CI K P+ + + + + + +F+S+K +SR Sbjct: 157 LDRGCIT-ALGKGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISR 215 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 Q + I+ AG+ I PH LRH+ L G+D R++QD LGH ++ T YT Sbjct: 216 QLAWMIVKEYASQAGIG-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTH 274 Query: 179 SNAGRFYGIWDRARGRQ 195 G+ R Sbjct: 275 VANVWLQGVVKEHHSRN 291 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 +A + +T S++ LL++ + + R+ + G R SE+ LR+ +DL Sbjct: 106 PRAPRNLPHTMTDSDVNRLLESCDVSTAAGLRDRAFLEFLYATGARISEVATLRLEQVDL 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE-----SEWVFLSRKGNP 115 + + + K PL ++ LK +L R + + +F+S +GN Sbjct: 166 QNGTVRLF-GKGSKERIVPLYESAIEWLKKYLRSSRPTLLLKDKTGRVHSALFISVRGNN 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +S + S+ AGL + PH +RH+ L G D R++Q+ LGH ++ T Sbjct: 225 MSADSLRKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQV 284 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT + R A R + Sbjct: 285 YTHLSVDRLKEAAKAAHPRSK 305 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 255 bits (652), Expect = 7e-67, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + FL E + L++A +T P R+ L + G R SE+ L + D+D+ Sbjct: 106 PKLEKRLPRFLYEDEAKELVEAPDTKQPLGMRDRALLETLYAGGLRISELVLLDLGDLDI 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES------EWVFLSRKGNP 115 + I + K+ PL + V+AL+ +L+ A S +FL+ +G Sbjct: 166 SSGYIRVT-GKRARERLVPLGSMAVEALQAYLAKARPRLMANSVAKKINNALFLNCRGER 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 LS + I+ L +I PH LRHS L N G D R +Q+ +GH + T Sbjct: 225 LSARGIRKILDKYVEKVSLERKISPHTLRHSFATHLLNAGADLRSVQELMGHVRLSSTQV 284 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT R ++ ++ R + Sbjct: 285 YTHVTGERLKKVYRKSHPRAK 305 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + + L + +LL++ + P R+ L + + G R SEI ++ D Sbjct: 100 PRQGLSLPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFD 159 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPLSR 118 + + K + P+ + AL+ +L +FL+ +G PL+R Sbjct: 160 KDEAFVRVL-GKGNKTRLVPVGRSALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTR 218 Query: 119 QQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 ++ I+ AGL + PH+LRHS L G D R+IQ+ LGH +I T YT Sbjct: 219 ERIRQILRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTH 278 Query: 179 SNAGRFYGIWDRARGR 194 R I R R Sbjct: 279 LEQQRLNSIHHRFHPR 294 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 23/216 (10%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN----------------TGPHAARNYCLTLLCFIHGF 46 K + + L+ E+ L+ + P R+ L + G Sbjct: 104 PKGASTLPDVLSVDEVMRLMDSIPLSRHHDGKQGHGDAAADDPVMLRDKALLEFMYATGS 163 Query: 47 RASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE- 105 R SE C + + DIDL K K P+ + +AL+ +L ++S+ Sbjct: 164 RVSEACGVDLDDIDLDDKVAR-LMGKGSKQRLVPVGSFACEALRRYLRFGRPVLQSKSKG 222 Query: 106 -----WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL 160 VFL+++G LSRQ + II T+G A ++ +HPH LRHS L G D R Sbjct: 223 AAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHITKPLHPHTLRHSFATHLIQGGADVRT 282 Query: 161 IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 +Q+ LGH ++ T YT + + A R R Sbjct: 283 VQELLGHASVTTTQIYTHVSPENLIEAYLTAHPRAR 318 >UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6I8_9ACTN Length = 342 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 11/203 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + L+ S IE LL R+ L L + G R SE L +SDI Sbjct: 141 PKIPKTLPHVLSESSIEKLLATCQEDTVCGLRDRALLELLYATGCRISEAAHLCVSDISF 200 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE---------SEWVFLSRK 112 +K + + K P+ + + L +L+ ++ ++ VF+S + Sbjct: 201 DSKQVRLF-GKGSKERIVPIYPECARILHMYLTTARPVLLSKQKNQAQAQTNQHVFISTR 259 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G +S Q ++ + L PH +RHS L + G D R +Q+ LGH ++ Sbjct: 260 GKAMSDQALRYVFEHYMRLSHLQEIATPHTMRHSFATELLSHGADLRSVQELLGHASLAT 319 Query: 173 TVWYTASNAGRFYGIWDRARGRQ 195 T YT + RA R Sbjct: 320 TQIYTHVSVNALKDAARRANPRA 342 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 15/207 (7%) Query: 4 KADNKKRNFLTHSEIESLLKAA----------NTGPHAARNYCLTLLCFIHGFRASEICR 53 K D L+ +I +LL + N A+R+ + + + G R E Sbjct: 112 KKDKSLPLILSREDISTLLSSPAPYWAQKKGKNNDFMASRDAAILEIIYSGGLRIQEALD 171 Query: 54 LRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLS 110 + I+L+ + I K T L N QAL+ + + R + + ++ VF++ Sbjct: 172 INFDQINLEESTLKIF-GKGKKQRTAYLGNPAKQALEQYFACRKNAELNWTSANDPVFIN 230 Query: 111 RKG-NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRN 169 K LS + + + L +I PH LRHS L + G D R +Q+ LGH N Sbjct: 231 LKDLKRLSARSIQRNLKAYLQSCQLPPDITPHKLRHSFATHLLDAGADLRSVQELLGHEN 290 Query: 170 IRHTVWYTASNAGRFYGIWDRARGRQR 196 + T YT + R +D+A + Sbjct: 291 LSTTQIYTHISTDRLLQAYDQAHPHAQ 317 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 6/195 (3%) Query: 7 NKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 K FL +E+ L+AA RN L L + G R EI L S ID ++ Sbjct: 109 KKLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFEITNLTFSQIDFNSQ 168 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA---ESEWVFLSRKGNPLSRQQF 121 + I K P + +LK +L R + ++F++ +G L+ Sbjct: 169 IVDIT-GKGKKQRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLTETGA 227 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 +I+ + L+ IHPHMLRHS L N G D R +Q+ LGH ++ T YT Sbjct: 228 EYILKQVSKRSKLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYTHITT 287 Query: 182 GRFYGIWDRARGRQR 196 + + R + Sbjct: 288 ENLQENYKKFFDRAK 302 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 12/198 (6%) Query: 2 KNKADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K L+ ++E ++ ++ AAR+ + L + G R E+C+ +SD+ Sbjct: 115 TPKKHQHLPEVLSPEKVEEAIEKVSSEDSAVAARDLAIVELLYATGMRVEELCKADVSDV 174 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLSRKGNPLS 117 + I + K P ALK WL +R ++P + +FL +G L+ Sbjct: 175 NFSRHIISV-VGKGDKQRIVPFGAPAEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLN 233 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 +Q +I ++ PH LRHS A+ G D R++Q+ LGH ++ T YT Sbjct: 234 PRQARRVIHKWA-------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYT 286 Query: 178 ASNAGRFYGIWDRARGRQ 195 +A R + RA R Sbjct: 287 HVSADRLREVHKRAHPRA 304 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 11/205 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKA-------ANTGPHAARNYCLTLLCFIHGFRASEICRLR 55 K K +FL ++ LL + A RN+ L + G R SE+ + Sbjct: 120 PKLGTKIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGVRVSELAGMD 179 Query: 56 ISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI---RTSYPHAESEWVFLSRK 112 SD+D + + K P+ K + A+K +L + + +F + + Sbjct: 180 ESDVDFHEGMVRVL-GKGSKERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNAR 238 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G L+ + + ++ GL + PH LRH+ L N G D R IQ+ LGH N+ Sbjct: 239 GRRLTTRSVHRLLRMELRRCGLWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLST 298 Query: 173 TVWYTASNAGRFYGIWDRARGRQRH 197 T YT + + ++D A R R Sbjct: 299 TQRYTHVHVDQLMKVYDAAHPRSRR 323 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 2/187 (1%) Query: 5 ADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAK 64 + T EIE ++ P R + + L + G R SE L ++ +DL+ Sbjct: 103 RTQSLPVYCTRDEIEKIMAQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELG 162 Query: 65 CIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQFYH 123 + I K P+ + ++ ++ ++ +R Y + W+F++R G + Sbjct: 163 MLRIW-GKGNKERLVPMPKQTIKIVREYVDTVRPLYQKKPTSWLFITRLGKKTTTASIES 221 Query: 124 IISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGR 183 +I + AG+ I PH LRH+ + G D R +Q+ LGH +I T YT + R Sbjct: 222 MIKSVCIQAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIYTHIDRSR 281 Query: 184 FYGIWDR 190 +D Sbjct: 282 LRTAYDE 288 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 8/199 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAA------NTGPHAARNYCLTLLCFIHGFRASEICRLRIS 57 K + L + +L A + PH AR+ + + + G R E+C L + Sbjct: 118 KVPKRLPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLG 177 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPL 116 D+D + + + K T P+ ++A+ WL R + S + +FL +G + Sbjct: 178 DVDRSRRTVKVT-GKGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRI 236 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 ++ ++ T S ++ PH LRH+ L G D R +QD LGH ++ T Y Sbjct: 237 DQRVVRRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIY 296 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + R + +A R Sbjct: 297 THVSTERLRTAFRQAHPRA 315 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-----GPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA + L + L+AA + P A R+ + + + G R SE+C L + Sbjct: 102 PKARRTLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVD 161 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 D+D + + + K T P AL WL R + A+S + L +G Sbjct: 162 DVDTSRRLLRVL-GKGNKQRTVPYGEPAHAALTAWLHEGRPALATADSGPALLLGARGKR 220 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L +Q ++ + G + +I PH LRHS L G D R++Q+ LGH ++ T Sbjct: 221 LDPRQARTVVHQTVSAVGGAPDIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQL 280 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT R + D+A R Sbjct: 281 YTHVTVARLRAVHDQAHPRA 300 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 4/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D L +LL AR+ + L + G R SE L + D+D Sbjct: 97 PKRDKLLPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALNLDDVDF 156 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I R K G P+ + + L+ WL R+ + +FL R G+ L +Q Sbjct: 157 SDSLLRI-RGKGGKERLVPIGAEAMLRLRTWLGERS--AGMDEPALFLGRHGHRLGGRQV 213 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + G +HPHMLRHS + D R +Q+ LGH N+ T YTA + Sbjct: 214 EKRLRDWAIKTGAGQHVHPHMLRHSFASHMLQSSGDLRAVQELLGHANLSSTQIYTALDF 273 Query: 182 GRFYGIWDRARGRQRH 197 ++D A R R Sbjct: 274 QHLAKVYDGAHPRARK 289 >UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX82_METI4 Length = 280 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 20/210 (9%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAAN---------------TGPHAARNYCLTLLCFIHG 45 M K D +L+ ++++LL A R+ + G Sbjct: 76 MLPKPDRNLPRYLSLEQVQALLNAPQKKWEKEKEKGKKSRWNEWQWKRDQAWLETLYGAG 135 Query: 46 FRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE 105 R E+ L+ + + + K+ L +L ++L ESE Sbjct: 136 LRVGELSSLKRKNFFPSDLALLV-EGKRKKERYCILGEVATASLCSYLESCPF----ESE 190 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 ++F+S +G PL+ + F + AGL I PH LRH+ L G D R IQ+ L Sbjct: 191 FLFVSSRGKPLTPRFFQLSLKEYLAIAGLDQSISPHKLRHTFATHLLEGGADLRSIQELL 250 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 GH ++ T YTA +A + R R Sbjct: 251 GHAHLSTTQIYTAVSAEHLKESYFRTHPRA 280 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 2/197 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L EI LL+A + R+ + + G R SE+ L + ++L Sbjct: 101 PRLPRNLPGVLDEEEILRLLEAPDPKTDEGIRDRAILATFYASGLRVSELAELTLDRLNL 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I + K L LK +L + + +FL+R+ +RQ Sbjct: 161 NEEQIRVT-GKGQKERVAFLDGLSCARLKLYLERVRPSTNTAEKTLFLTRRQTGFTRQGL 219 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + +I G+ + PH LRHS L + G+D R IQ LGH +I+ T YT + Sbjct: 220 WLLIKGYARQCGIDRSVSPHTLRHSFATHLLSHGMDIRSIQILLGHSDIQTTEIYTHVDI 279 Query: 182 GRFYGIWDRARGRQRHA 198 + R + Sbjct: 280 RMLAEDLAKYHPRGKRP 296 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + ++L+ EIE LL + P RN + L + G R SE+C LR + + Sbjct: 99 RLSRLLPDYLSLPEIERLLHIYDEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYE 158 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEW-VFLSRKGNPLSRQQ 120 + + + K + P + + ++ IR + + +S G PL+R + Sbjct: 159 SGFLRVK-GKGSKERSVPFGTQVASMSRQYIKNIRPQLCKKNNPPELIVSNNGRPLTRSR 217 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 + + + A ++ +HPH+LRHS L + D R+IQ+ LGH +I T YT Sbjct: 218 VWQFLKEAAIKAEINKNLHPHVLRHSFASHLLSNNADLRIIQELLGHADIATTEIYTHVE 277 Query: 181 AGRFYGIWDRARGRQ 195 R I + R Sbjct: 278 KTRLQNIHQKFFPRA 292 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 3/195 (1%) Query: 4 KADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K +LT +++ LL + + RN C+ L + G R SE ++I DI + Sbjct: 105 KTSRPLPEYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFR 164 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K+ P + L +L S+ S+ F KG +S + Sbjct: 165 DYYVRVM-GKESKERIVPFYKELGDLLTKYLKKYGSFSQL-SDPFFKGSKGKAISVRSIQ 222 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 ++ G L ++HPH+LRHS L + G D R++Q LGH N+ T YT + Sbjct: 223 LLLEKKGRELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYTHVSQD 282 Query: 183 RFYGIWDRARGRQRH 197 + Sbjct: 283 TLRRVIAETHPLSHK 297 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA----------------ARNYCLTLLCFIHGF 46 KA + + + +LL + P + R+ L L + G Sbjct: 107 PKAPKRLPRAPSVEQTLNLLDKSTPRPLSPEASDFDTSAWAVLRSLRDTALLELLYSAGL 166 Query: 47 RASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE- 105 R SE C L +D+DL+ + + K G PL V A++ WL RT Sbjct: 167 RISEACNLDRADVDLRGGELRVRHGKGGKQRMVPLGRTAVAAIEAWLQARTRAKPQLDPM 226 Query: 106 -WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDY 164 +F + G L+ ++ ++ L + PH LRH+ L G D R IQ+ Sbjct: 227 GPIFTGQLGKRLNSREGQRLLEKWRARLDLPESVTPHALRHAFATHLLQAGADLRAIQEM 286 Query: 165 LGHRNIRHTVWYTASNAGRFYGIWDRARGRQRH 197 +GH ++ T YT + ++D A R + Sbjct: 287 MGHASLSATQKYTHLDMQALAKVYDAAHPRAQR 319 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 88/248 (35%), Gaps = 55/248 (22%) Query: 3 NKADNKKRNFLTHSEIESLLKAA------------------------------------- 25 K L + L++A Sbjct: 114 PKRRKALPRALDVDDAFRLIEAPTRAPASGADAAAASPARNVGRSGGRSANRAGATGTAS 173 Query: 26 ---------NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID---LKAKCIYIHRLKK 73 + P R+ + + + G R E C L + DID L + + + R K Sbjct: 174 AGKNKRAKTSREPLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKG 233 Query: 74 GFSTTHPLLNKEVQALKNWLSIRTSYPHAESEW-----VFLSRKGNPLSRQQFYHIISTS 128 G PL + V AL +L++R ++ +FLS +G L+ + +I + Sbjct: 234 GKERIVPLGRQAVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRN 293 Query: 129 GGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIW 188 G + E PH LRHS L + G+D R IQ+ LGH ++ T YT + ++ Sbjct: 294 AQEVG-AYEATPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVY 352 Query: 189 DRARGRQR 196 D + R R Sbjct: 353 DASHPRAR 360 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 16/210 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT--------------GPHAARNYCLTLLCFIHGFRA 48 K + + L + ++L + AAR++ L L + G R Sbjct: 120 PKQEQRHPRVLNVDQAFAVLDTPDALAGTGSPRIPPATGDALAARDHALAELLYGSGLRI 179 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVF 108 SE L ++D+ L + + K PL + V AL+ WL R + + +F Sbjct: 180 SEALGLDVTDLRLDESVVRVF-GKGARERMSPLSDTSVTALRAWLEQRGTLAPEGEKALF 238 Query: 109 LSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHR 168 + +G L R++ I NAG+ + PH LRHS L + G D R +Q+ LGH+ Sbjct: 239 VGARGGRLDRREAMRRIERLCRNAGVE-PVSPHALRHSFATHLLDAGADLRSVQELLGHQ 297 Query: 169 NIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 + T YT + R ++D A R + Sbjct: 298 RLTTTQRYTRVSLERLMHLYDEAHPRAQKK 327 >UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae RepID=XERC_NEIMF Length = 305 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K + L + +L P A R++ L L + G R SEI L D+ Sbjct: 108 PPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDV 167 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 L +++ K PL K V+ALKN+L +R + ++ + +F R G LS++ Sbjct: 168 YLDEAWVHVT-GKGRKQRQVPLTGKSVEALKNYLPLRQT--ASDGKALFTGRNGTRLSQR 224 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 Q ++ G + PHM+RHS L D R +Q+ LGH ++ T YT Sbjct: 225 QIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKL 284 Query: 180 NAGRFYGIWDRARGRQRH 197 + ++D A R + Sbjct: 285 DFDHIARLYDEAHPRAKR 302 >UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECJ8_9ACTN Length = 220 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 11/202 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K LT ++E+LLK +T P R+ + L + G R SE+ L + I Sbjct: 18 PKLPRDLPGVLTTQQVEALLKTPDTSTPAGLRDAAMLELLYASGARISELAALNVESIGW 77 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---------WVFLSRK 112 + + K PL + ++A + ++ A+++ + +S + Sbjct: 78 SERTLR-LWGKGSKERIVPLYRRALEATRLYIEEGRPELLAQAKRRDPATGPHPLLISAR 136 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 GN +S T AG+ +I PH +RH+ L G D R +Q+ LGH ++ Sbjct: 137 GNRMSAAMLRRRFHTLATLAGIPADIAPHAMRHTFATDLLEGGADLRSVQELLGHASLST 196 Query: 173 TVWYTASNAGRFYGIWDRARGR 194 T YT R +A R Sbjct: 197 TQIYTHLTPDRLKRAVAQAHPR 218 >UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI00019772C5 Length = 334 Score = 251 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 85/237 (35%), Gaps = 44/237 (18%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTGP------------------------------- 29 M K + + LT ++ E L+ + Sbjct: 100 MTPKLPDTLPSVLTEAQAERLMDRVDDDASLHAASSQRYETRHDEMPRLDSAHRGEGMSQ 159 Query: 30 ----HAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKE 85 A R+ + L + G R +E+ L I D+D + I + K P + Sbjct: 160 RDEVVALRDAAMLELLYATGIRVAELVGLDIGDVDWSHRTIRVT-GKGSKQRVVPFGDPA 218 Query: 86 VQALKNWLSIRTSYPHA-------ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEI 138 +AL W ++ +FL +G + ++ ++ + +G+ +I Sbjct: 219 EKALAGWKEHGRPLILRRAGAGTLDTAALFLGMRGRRIDQRIVRDVVHRAARESGVP-DI 277 Query: 139 HPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 PH LRHS + + G D R +Q+ LGH ++R T YT + + + +A R Sbjct: 278 SPHSLRHSAATHMLDGGADLREVQEMLGHSSLRTTQRYTHVSIEQLKERYRQAFPRA 334 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K + E+ + + RN+ L + + G R SEI + + ++D Sbjct: 109 KKPGQHLPRYFYQKELTKMFDVVMTDQSALGLRNHLLLEMLYGTGARVSEIANMTLQNVD 168 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE----SEWVFLSRKGNPL 116 A+ + I K + P AL +L ++ S +FL+++G P+ Sbjct: 169 SHARVVTIT-GKGNKTRIVPFGRYAADALAKYLKTGRPVLASKQADTSNKLFLNQRGAPV 227 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + +I+ G +GL+ E+ HM RH+ L N D R +Q LGH ++ T Y Sbjct: 228 TTAGIEYILKQIGKKSGLTQEVTAHMFRHTFATDLLNNQADLRTVQQLLGHSSLSTTQIY 287 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + R Sbjct: 288 THVTTDALQKSYRNFFPRASE 308 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 86/200 (43%), Gaps = 8/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT-----GPHAARNYCLTLLCFIHGFRASEICRLRIS 57 KA L + L AAN+ P A R+ + + + G R SE+C L I Sbjct: 102 PKARRTLPAVLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDID 161 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGNP 115 D+D + + + K T P QAL+ WL+ R + AES + L +G Sbjct: 162 DVDTSRRLLRVL-GKGDKQRTVPFGEPAEQALRAWLTSGRPALATAESGPALLLGARGRR 220 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L +Q ++ + G + +I PH LRHS L G D R++Q+ LGH + T Sbjct: 221 LDPRQARTVVHETVGAVAGAPDIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLATTQL 280 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT R + D+A R Sbjct: 281 YTHVTVARLRAVHDQAHPRA 300 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 5/195 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K L + + +L ++ R+ + + + G R SE+ L I D+D Sbjct: 101 PKVAKSLPKTLDYERLVQMLTPKSSAFSELRDAAMVEVLYSCGLRVSELVGLDIEDVDAS 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 + + K PL +++ +L ++ +F++ + +S + Sbjct: 161 QGFLRVM-GKGSKVRYTPLGESAQKSINRYLQK----TSHTNKALFVNNRQERISTRTVQ 215 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 +II + G+ + +HPHMLRH+ D R +Q++LGH++I+ T YT + Sbjct: 216 NIIKNRALSVGIKVNVHPHMLRHAAATHFLQSSHDLRSVQEFLGHKSIKSTQVYTHLDFL 275 Query: 183 RFYGIWDRARGRQRH 197 ++D+ R + Sbjct: 276 ELSKVYDKCHPRAKK 290 >UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4E0_ACIC5 Length = 310 Score = 250 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 9/203 (4%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTG--PHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K T ++ L+ A++ AR+ + L + G R +E+ + + DI Sbjct: 109 TPKLPKHLPRVPTIEDMNRLVDASSEEVAAWPARDRLILELLYGCGIRNAELVGINLEDI 168 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP---HAESEWVFLSRK---G 113 + I + R K P+ + QAL+ +L R +S + L+ + Sbjct: 169 QWTNEAILV-RGKGRKERYVPIGDAAAQALRAYLPERNQKLATAGKDSAALLLNARLRGQ 227 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 L+ + I+ GL ++HPH LRH+ G L G D R IQ+ LGH + T Sbjct: 228 GRLTTRSVGRIVKQMALAQGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLSTT 287 Query: 174 VWYTASNAGRFYGIWDRARGRQR 196 YT G+ ++DR R + Sbjct: 288 QRYTQLTVGQVEAVYDRTHPRAK 310 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 5/196 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAA-NTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K K N LT E+E LL+ NT P R+ + L + G R +E+ L + D+++ Sbjct: 101 PKMVKKPPNILTLEEVELLLQQPLNTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNV 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 I P+ + AL+ +++ E + +FL+ G L+RQ Sbjct: 161 NLGYIRCCN--NTKERVIPIGTLSLIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 F+ II A + I PH LRHS L G D + +Q+ LGH +I T Y Sbjct: 219 GFWKIIKVYTKQAAIEKSITPHTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQL 278 Query: 180 NAGRFYGIWDRARGRQ 195 + ++++ R Sbjct: 279 TKHKIKDVYNKTHPRA 294 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 2/198 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + L+ E+E L++A + P R+ + + G R SE+ + +DL Sbjct: 105 PRLPRSLPKILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDL 164 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + + K L + L ++L+ E +FL+R G PL+RQ Sbjct: 165 ATGALRVM-GKGAKERIAFLDERTRHLLSDYLTTVRPAFAREHPELFLARDGAPLTRQAL 223 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + +I G AG++ + PH+LRHS L G+D R IQ LGH +IR T YT + Sbjct: 224 WTLIKKHGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHVSL 283 Query: 182 GRFYGIWDRARGRQRHAV 199 R + Sbjct: 284 AHLENTLKLHHPRGQSQA 301 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 5/198 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + D K + L+ EIE LL + + P ARN + + + G R +E+ L+IS++ Sbjct: 103 TPRIDRKIPDVLSLQEIEDLLAVIDLSTPEGARNRAMIEVLYSSGLRVTELIELKISNLY 162 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT---SYPHAESEWVFLSRKGNPLS 117 L + I K P+ + + L +++ ++VFL+R+G +S Sbjct: 163 LDIGFLRI-IGKANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKIS 221 Query: 118 RQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 R + II A + I PH RHS L G + + +Q+ LGH NI T Y Sbjct: 222 RVMVFMIIKEVALLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIYK 281 Query: 178 ASNAGRFYGIWDRARGRQ 195 + R Sbjct: 282 RLDQDILRQTLLEFHPRS 299 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 10/204 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K FL +++ R+ + + G R SE+C L ++ +D Sbjct: 152 PKVRRPLPTFLDVDAAAEVMEIPGAETAEGLRDRAMLETLYGAGLRVSELCGLDLTHVDR 211 Query: 62 ---KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-----ESEWVFLSRKG 113 + + K PL + + A++ +L R + +FLSR+G Sbjct: 212 RPADRAAVRV-VGKGDKERIVPLGSHALAAIERYLERRDELADPTTGARDPRALFLSRRG 270 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 + ++ ++ G ++HPH LRH+C L + G D R IQ LGH ++ T Sbjct: 271 ARIGVRRVQALVQRYGALGAGRADLHPHALRHTCATHLLDGGADLRAIQKLLGHASLATT 330 Query: 174 VWYTASNAGRFYGIWDRARGRQRH 197 YT + ++D A R Sbjct: 331 QRYTHVSIDHLLKVYDAAHPMARK 354 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 5/195 (2%) Query: 4 KADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 + K F E+ ++++ N G P RN + L + G R SE+ L+I +DL+ Sbjct: 101 RGKKKLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYATGMRLSELTDLKIKQLDLE 160 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE---WVFLSRKGNPLSRQ 119 I +H K + + L+ +L VFL++ G P+S + Sbjct: 161 NGMILVH-GKGNKDRYVFFDQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISSR 219 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + AGL+ HPH LRHS A+ N G D R +Q+ LGH ++ T YT Sbjct: 220 GIAKAVQQIFQKAGLTAGAHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTHV 279 Query: 180 NAGRFYGIWDRARGR 194 + + + R Sbjct: 280 SMQHLTVEYRQHFPR 294 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 23/217 (10%) Query: 1 MKNKADNKKRNFLTHSEIESLLK----------------AANTGPHAARNYCLTLLCFIH 44 + + FL+ E E L A + G AR+ L + + Sbjct: 120 ITPRFSKPVPGFLSERETEKLFDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGC 179 Query: 45 GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSY----- 99 G R SE+ L+ +++L+ + + K G PL AL+N+ +R ++ Sbjct: 180 GLRISEVIGLQYENVNLQDSLLRV-SGKGGKQRIVPLGGPARTALRNYFEVRRNFFRMKN 238 Query: 100 -PHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDT 158 ++ +VF+++KG + + +PH+LRHS + N G D Sbjct: 239 EESPDASYVFVTKKGRRIYPVLVQRVTRKYLSAVTEIKYKNPHVLRHSFATHMLNSGADL 298 Query: 159 RLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 + + + LGH N+ T YT GR ++ +A + Sbjct: 299 KSVSEMLGHTNLTTTEIYTHVTFGRIKEVYLKAHPKA 335 >UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510416 Length = 319 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 14/207 (6%) Query: 2 KNKADNKKRNFLTHSEIESLL--------KAANTGPHAA----RNYCLTLLCFIHGFRAS 49 K D++ L + L+ +A N+ P A R+ + + + R S Sbjct: 114 TPKKDSRLPTVLKPQQAADLVSRQRTVHTEADNSDPIEATKWVRDAAILEMLYATAVRVS 173 Query: 50 EICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVF 108 E+ L D+D + I + K P AL+ WLS+R ++ S + +F Sbjct: 174 ELTGLNRGDVDHQRSMITVL-GKGNKERRVPYGKPAQTALQKWLSLRDTFASESSGDALF 232 Query: 109 LSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHR 168 L +G + +Q ++ G + +I PH LRHS + + G D R IQ+ LGH Sbjct: 233 LGVRGGRIGARQVRELVHRYGAADPSAPDIGPHGLRHSAATHMLDGGADLRQIQELLGHS 292 Query: 169 NIRHTVWYTASNAGRFYGIWDRARGRQ 195 + T YT + R + +A R Sbjct: 293 TMSSTQIYTHVSMQRLQETYRQAHPRA 319 >UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=C0AAZ7_9BACT Length = 329 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 11/202 (5%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN---------TGPHAARNYCLTLLCFIHGFRASEICR 53 K + + FLT +++ LL T A R+ L + G R SE+ Sbjct: 130 PKLEKRLPKFLTEQQMKLLLSGPQRLLDNVADITPFTAWRDRLAMELLYGGGLRVSELTA 189 Query: 54 LRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKG 113 L ID + + K PL + L W + + + ++ + Sbjct: 190 LDYGQIDFTSGVARVL-GKGRKERLCPLGKVALAVLVKWKNEYARDTSPAAPVL-VTPEH 247 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 + +Q ++ AGL ++ PH LRHS L N G D RL+Q+ LGH ++ T Sbjct: 248 ERMPVRQVQLMLKRYLALAGLPTDLSPHKLRHSYATHLLNAGADLRLVQELLGHASLNTT 307 Query: 174 VWYTASNAGRFYGIWDRARGRQ 195 YT + R I+D+A R Sbjct: 308 QIYTHVSIARLRDIYDKAHPRA 329 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 4/193 (2%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + +L+ E + L++AA++ R Y + + G R E+C L+ISD+DL Sbjct: 94 PPKRPSHMPVYLSEDEAKRLIEAASSDT---RMYAIVSVLAYTGVRVGELCNLKISDVDL 150 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQF 121 + I + K + + V+AL ++L +R S +++++F+S + Sbjct: 151 QESIINVRSGKGDKDRIVIMAEECVKALGSYLDLRLSMDT-DNDYLFVSNRRVRFDTSTI 209 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 +I G AG+ ++ PH+LRH+ ++ G D R IQ LGH ++ T YT N Sbjct: 210 ERMIRDLGKKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLND 269 Query: 182 GRFYGIWDRARGR 194 ++ + R R Sbjct: 270 SALREMYTQHRPR 282 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 9/200 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA-----ARNYCLTLLCFIHGFRASEICRLRIS 57 +AD + L S+ LL A A RN+ + L + G R SE+C L IS Sbjct: 106 PRADQLLPSPLDESDARVLLNTARDEAAAGGASQIRNWAILELTYACGLRVSEVCALDIS 165 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAES-EWVFLSRKGNP 115 ++ A + + K P AL +WL R S +FL KG Sbjct: 166 SLNRDALTVRV-VGKGNKERVVPYGPPAADALDHWLVRGRPQLAGERSGNALFLGDKGGR 224 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 + + ++ + AG+ +I PH LRHS L G D R +Q+ LGH ++ T Sbjct: 225 IDPRIVRSMVHKTAARAGVH-DIAPHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQR 283 Query: 176 YTASNAGRFYGIWDRARGRQ 195 YT + R I+ RA R Sbjct: 284 YTHVDTARLSAIYQRAHPRA 303 >UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Proteobacteria RepID=Q1LSD3_RALME Length = 369 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 18/213 (8%) Query: 3 NKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRI---SD 58 K L+ +L+ + + R+ + L + G R SE+ +L + D Sbjct: 129 PKRGRPLPKALSVEHAVALVAHRQDDTNESLRDQAVFELFYSSGLRLSELIQLDVRYTED 188 Query: 59 --------IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-----ESE 105 +DL + + K T P+ +K +QALK W+ +R ++ Sbjct: 189 GDYRSSGWLDLDGAEVTVL-GKGSRRRTVPVGSKAIQALKAWIHVREMMLRPGALPEDAH 247 Query: 106 WVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYL 165 +FL +G L I AG+ ++HPHMLRHS + D R +Q+ L Sbjct: 248 ALFLGTRGRRLPISTVQQRIKRQALAAGVPSDVHPHMLRHSFATHMLQSSGDLRAVQEML 307 Query: 166 GHRNIRHTVWYTASNAGRFYGIWDRARGRQRHA 198 GH +I T YT+ + ++D+A R A Sbjct: 308 GHASISTTQIYTSLDFQHLAKVYDQAHPRAGRA 340 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 KA K + + LL R+ C+ L + G R +E+ RL + DID Sbjct: 113 PKAAKKLPDAPAIETMNQLLDQPMVEDELLIRDRCMFELIYSSGLRVAELVRLDVHDIDR 172 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-AESEWVFLSRKGNPLSRQQ 120 + K+ + P+ K + + WL IR + +FL+R+G L+ + Sbjct: 173 SEGIARVT-GKREKTRLVPVGGKALDRVALWLPIRKTLLKDTTEPALFLNRRGQRLTIRS 231 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ L +HPH LRH+ + D R +Q+ LGH ++ T YT + Sbjct: 232 VQMRLNRLAQQTHLGQTLHPHQLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLD 291 Query: 181 AGRFYGIWDRARGRQ 195 R +++ A R Sbjct: 292 FQRLAQVYESAHPRA 306 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 24/216 (11%) Query: 3 NKADNKKRNFLTHSEIESLLK---------AANTGPHAA----------RNYCLTLLCFI 43 K + LT +I LL A A R+ + + + Sbjct: 104 PKKSFHLPDVLTQDQIIHLLDDPFKPQLLPAPKLTARKALSLKPQACFYRDKAILEMLYG 163 Query: 44 HGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--- 100 G R SE+C L D+ + + + + K P L +++ +N+ + + Sbjct: 164 CGLRVSELCGLNQGDVLVSDELVRVF-GKGSKERLVPCLGTALESYQNYCTKWRALLACS 222 Query: 101 HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL 160 ++ VFLS +G +SRQ + ++ G G+ +HPH LRHS + G++ R+ Sbjct: 223 PKTTDAVFLSVRGTRISRQAVFSLVERYGSYVGI-KGLHPHTLRHSYATHMLEGGMNLRI 281 Query: 161 IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 +Q+ LGH +I T YT + + A R + Sbjct: 282 VQELLGHASISTTQLYTHIDLTHIRSEYMAAHPRAQ 317 >UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francisella RepID=B0TX96_FRAP2 Length = 293 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 3/196 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K+ K + E+ LL + R+ L + G R SE+ + + DI++ Sbjct: 100 PKSSKKLPKAVNTDELAYLLDIKPSNNIETRDIACFDLLYSCGIRLSELSSIELKDININ 159 Query: 63 AKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFY 122 K I + K +K + L WL+ R +Y + ++F+S+ G L+ + Sbjct: 160 QKSIRV-IGKGNKERVVYFGSKTLINLNRWLNTRDTY-SPKCNFLFISQNGEHLTNRSIQ 217 Query: 123 HIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAG 182 I + IHPHMLRHS + + D ++D LGH +I T YT N Sbjct: 218 KRIEIFAQKYA-TKHIHPHMLRHSFATHVLDSSKDLLAVKDLLGHADISSTQIYTHLNFQ 276 Query: 183 RFYGIWDRARGRQRHA 198 + ++D+A R + Sbjct: 277 QLASVFDKAHPRAKKK 292 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAA--NTGPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K D LT +++ LL+ + P R+ + L + G R SE+ L ++D+D Sbjct: 101 PKVDRDLPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVD 160 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES----EWVFLSRKGNPL 116 L+ + K G P+ AL+ + I + S E +FL+ +G L Sbjct: 161 LERNEVRC-IGKNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGKRL 219 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +RQ F+ I+ GLS ++ PH+LRHS + N G D R +Q+ LGH +I T Y Sbjct: 220 TRQGFWLILKQYAEELGLS-DLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIY 278 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T N + R Sbjct: 279 THLNHESSHTPHAHPAPRASE 299 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 3/194 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + +T+ ++E L+ + + R+ CL L + G R SEI L DID Sbjct: 119 PRLPKELPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDF 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 + I I R K P+ Q LK +L+ + +S+ +FL+ G L+ + Sbjct: 179 NSNLIRI-RGKGKKERIIPITTLAAQWLKQYLNHPERAGVAKDSQAIFLNCFGTRLTTRS 237 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 +GLS I PH +RH+ G+D + IQ LGH ++ T YT + Sbjct: 238 IDRKFQKYLRLSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVS 297 Query: 181 AGRFYGIWDRARGR 194 + + Sbjct: 298 MKLKKQTHNESHPH 311 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 8/198 (4%) Query: 1 MKNKADNKKRNFLTHSEIESLLKA-ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 M + LT E+ LL+A A P R+ + L + G RASE+C L + D+ Sbjct: 104 MLPDKPSPMPAILTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDL 163 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 DL + + + R K PL+ + AL+ +L +R ++ +F +G P R+ Sbjct: 164 DLSSGTVRV-RGKGDKVRVLPLVGETRSALERYLKVRGTHQGP----IFQGDRGGPFRRE 218 Query: 120 QFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTA 178 + +I G A ++ +HPH+LRHSC L G+D R +Q LGH ++R T YT Sbjct: 219 MLWKMIQRRGRQACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTH 278 Query: 179 SNAGRFYGIWDRARGRQR 196 + ++DR+ R + Sbjct: 279 FDLE-LRDVYDRSHPRAQ 295 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 24/218 (11%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTG-----------------PHAARNYCLTLLCFI 43 + + D K F++ E L + + R+ + + + Sbjct: 120 VTPRLDKKVPRFVSEEEARQLFRRFESQEDNAALQGDGKKAEVRQFETFRDRAVLEVLYG 179 Query: 44 HGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH-- 101 G R SE+ L +D+DL + + K PL V+AL+ + +R ++ Sbjct: 180 CGLRLSELIALERADVDLVHGFLKVT-GKGRKQRIVPLGEPAVEALRKYFEVRRNFFRIP 238 Query: 102 ----AESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGID 157 ES VF++ +G L + S + +PH+LRHS + N G D Sbjct: 239 LERTGESSRVFVTSRGRQLYPMLVQRMTKRYLTPVSESEKKNPHILRHSFATHMLNGGAD 298 Query: 158 TRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 + + + LGH ++ T YT R I+D+A Sbjct: 299 LKSVSEMLGHSSLTTTELYTHVTFSRLKEIYDKAHPGA 336 >UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUW8_9GAMM Length = 308 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 4/193 (2%) Query: 5 ADNKKRNFLTHSEIESLLKAANTGP-HAARNYCLTLLCFIHGFRASEICRLRISDIDLKA 63 + E+++LL A + R+ + + G R SE+ L S +DL+A Sbjct: 116 IGRHLPAVPSEGEVDALLAAPDRRTVLGLRDAAMLETLYATGLRVSELVGLLCSQLDLEA 175 Query: 64 KCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQQF 121 + K P+ ++ L +L H +S +FL+ +G +SRQ+F Sbjct: 176 GVVL-TLGKGSKERLIPVGEVALETLHRYLREARGALLGHKQSPALFLTVRGEAMSRQRF 234 Query: 122 YHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNA 181 + I AG+ PH LRH+ L + G D R +Q LGH + T YT Sbjct: 235 WQTIKAHATKAGIRSAFSPHSLRHAFATHLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQ 294 Query: 182 GRFYGIWDRARGR 194 R + + R Sbjct: 295 ARLQNLHRQHHPR 307 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 7/180 (3%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANT--GPHAARNYCLTLLCFIHGFRASEICRLRISD 58 + + ++ E+ LL AA+ P R+ + + + G R SE+ L + D Sbjct: 106 ISPRVQKYWPKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDD 165 Query: 59 IDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKGNPL 116 I+L + +G + PL V LK +L + + +F++ +G L Sbjct: 166 INLDESHLKCI--GRGKTRKVPLSQPAVDVLKLYLERSRPLLVRGQDEQALFVNHRGQRL 223 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 +RQ F+ I+ AG+ I PH LRHS + + GID R +Q++LGH +I T Y Sbjct: 224 TRQGFWLILKAYASEAGI-KGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVY 282 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 9/202 (4%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDI 59 + K + + LT E+ +L A + P R+ + L G R SE+ RL + D+ Sbjct: 107 VAPKQRRELPHVLTAEELAALFDAPDLSCPVGLRDAAMLELFIATGARISELSRLELGDV 166 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAE------SEWVFLSRK 112 + + + K PL + ++ + +L R + A VF+S + Sbjct: 167 CVAERQV-CLLGKGSKERIVPLYARAIEVYERYLENGRPNLLRAPALGGDACRAVFVSDR 225 Query: 113 GNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH 172 G ++ + AG+S +I PH +RH+ L G D R +Q+ LGH ++ Sbjct: 226 GRAMNSDALRYRFDVLKRKAGISSDITPHAMRHTFATELLGGGADLRSVQELLGHASLST 285 Query: 173 TVWYTASNAGRFYGIWDRARGR 194 T YT R RA R Sbjct: 286 TQIYTHLTPDRLKSAVARAHPR 307 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 9/201 (4%) Query: 2 KNKADNKKRNFLTHSEIESLLK-----AANTGPHAARNYCLTLLCFIHGFRASEICRLRI 56 K DN L+ +I L A +A R++ + L + G R +E+ L + Sbjct: 104 TAKVDNHLPQVLSLEQINQLFNHLVETAQTGNVNAIRDWATSELLYSCGIRVAELVGLNL 163 Query: 57 SDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAES-EWVFLSRKGN 114 + +D + + + K P +++L+ W++ R + S + +FL +G Sbjct: 164 TSVDGSNRTLRV-IGKGNKERLVPFGTPALESLRAWVTQGRPQLVNERSGQALFLGSRGG 222 Query: 115 PLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTV 174 + ++ + + AG+ + + PH LRH + G D R +QD LGH ++ T Sbjct: 223 RIDQRIVRECLEKACVQAGVPV-LSPHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQ 281 Query: 175 WYTASNAGRFYGIWDRARGRQ 195 YT +A R I +A R Sbjct: 282 RYTHVDAVRLSNIMRQAHPRA 302 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 9/202 (4%) Query: 3 NKADNKKRNFLTHSEIESLLKAANT--GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K ++ EI ++L+ A GP R+ L L + G R +E+ L D+ Sbjct: 114 KKLGKHLPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDLY 173 Query: 61 LKAKCIYIHR-LKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE------WVFLSRKG 113 L + ++ K PL + VQAL+++L + +++ +FL+++G Sbjct: 174 LAGEFPHVKLFGKGRKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKRG 233 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 LSRQ + IIS + AG E+ PH LRHS L G R +Q+ LGH ++ T Sbjct: 234 LSLSRQSAWEIISQTAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTTT 293 Query: 174 VWYTASNAGRFYGIWDRARGRQ 195 YT + + R Sbjct: 294 QIYTKVSMNTLREVHALTHPRA 315 >UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacteria RepID=Q1IMN8_ACIBL Length = 313 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 12/204 (5%) Query: 3 NKADNKKRNFLTHSEIE-------SLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLR 55 + L+ E+ +L + A R+ + + + R SE+ +R Sbjct: 106 PRQWKVLPKSLSADEVLQTLQGPPRVLDTKESQALALRDRAMLEVFYAGALRVSEMIGVR 165 Query: 56 ISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP--HAESEWVFLSRKG 113 + D L + + R K PL + A+K++L S +F+ + Sbjct: 166 MEDAKLDLGYMMV-RGKGDKERIVPLGQSALVAVKSYLESGREVLCAGKTSPILFVGKGC 224 Query: 114 NPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHT 173 LSRQ+ + ++S + +G PHMLRHSC + G D R +Q LGH +I T Sbjct: 225 RKLSRQRVWQMVSAASQASG--RHASPHMLRHSCATHMVENGADLRTVQTILGHADISTT 282 Query: 174 VWYTASNAGRFYGIWDRARGRQRH 197 YT R + R + Sbjct: 283 QIYTHLALDRLKQVHRTFHPRSKR 306 >UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABE3_GEMAT Length = 324 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 16/208 (7%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAA-----RNYCLTLLCFIHGFRASEICRLRIS 57 K +L ++ E+L++ A T + RN + L + G R SE+ + ++ Sbjct: 118 PKLPRTLPAYLDRTQAETLMQHAATRAQSLEFTDVRNLAMLELFYSSGLRLSELRGVDLA 177 Query: 58 DIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE----------WV 107 D+DL ++ + + R K PL + +AL+N+L R + S V Sbjct: 178 DLDLVSQQVKV-RGKGRKERIVPLGDHAQRALRNYLVKRDALIAQASGGAVGRRVARGAV 236 Query: 108 FLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGH 167 FLS +G +S + H + T ++ H LRH+ L + G D R +Q+ LGH Sbjct: 237 FLSERGARISARAVQHAMVTLMSAVSEGADLTTHSLRHTFATHLVDAGADLRAVQELLGH 296 Query: 168 RNIRHTVWYTASNAGRFYGIWDRARGRQ 195 +I T YT ++ R ++ +A R Sbjct: 297 ASISTTQIYTHTSVDRLKKVYRQAHPRA 324 >UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMN9_ACIBL Length = 300 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 7/201 (3%) Query: 2 KNKADNKKRNFLTHSEIESLLKA--ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDI 59 K K T E+ +++ A R+ + L + G R SE+ + + DI Sbjct: 101 TPKLPKKLPRVPTMEELNTVMDAEMPEAASFPERDALIFELLYGCGIRNSELTGINLDDI 160 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPH---AESEWVFLSRKG-NP 115 + I I R K P + A K +L R + + ++ + Sbjct: 161 RWSNEAILI-RGKGKKERFVPFGDAAAVAAKVYLKKRQDILAERHKSTNALLINLRDVQR 219 Query: 116 LSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 L+ + I+ GL ++HPH LRH+ G L G D R IQ+ LGH + T Sbjct: 220 LTSRSVGRIVKKIAVARGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLATTQR 279 Query: 176 YTASNAGRFYGIWDRARGRQR 196 YT + ++D+ R + Sbjct: 280 YTQLSTRHVLEVYDKTHPRAK 300 >UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB85_BRAFD Length = 332 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 3 NKADNKKRNFLTHSEIESLLKA-------------------------ANTGPHAARNYCL 37 + LT + LL R+ + Sbjct: 109 PRRGRHLPTVLTGDQAGELLDGLDGSARDDSAAPPREIAAAPRAEQDPRDRAVLLRDAAV 168 Query: 38 TLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRT 97 L + G R SE+ L S ID + + + R K P+ ++AL+ W S Sbjct: 169 LELLYSSGLRVSELVALDRSRIDRQHGTVRV-RGKGDRERIVPVGLPALEALQRWESEGR 227 Query: 98 SYP-------HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA 150 + +FL +G L + ++ AG+S + PH LRHS Sbjct: 228 PVLLAAATPGTPPGDALFLGVRGGRLGDRAVRTLVDRHVAEAGISRHVTPHTLRHSAATH 287 Query: 151 LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 L G D R +QD+LGH ++ T YT +A R D+A R Sbjct: 288 LVEGGADLRSVQDFLGHSSLATTQIYTHVSAERLRRTVDQAHPRA 332 >UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia solanacearum RepID=XERC2_RALSO Length = 347 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 3/194 (1%) Query: 3 NKADNKKRN-FLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 K L+ E+E++L A+ P+ R+ + L + G R E+ L + D+D Sbjct: 124 PKLPKHLPRAILSVQEVEAILAEADPATPYGLRDRAMLELLYSTGIRRMEVAGLALYDVD 183 Query: 61 LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWL-SIRTSYPHAESEWVFLSRKGNPLSRQ 119 + ++ K P+ + + L +L R AE E +F++ G P+S + Sbjct: 184 ATRRLAFVRDGKGAKDRVVPVGVRALAWLDRYLLEARPQLIVAEREALFVTDYGEPVSPE 243 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 + AG+ H+LRH+ + G D R++Q LGH + T YT Sbjct: 244 YVASRVKRYMEFAGIQKPGATHLLRHAMATHMLEAGADVRVLQALLGHAQLNTTEIYTHV 303 Query: 180 NAGRFYGIWDRARG 193 + I D Sbjct: 304 SIEHLRAIHDATHP 317 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 10/204 (4%) Query: 4 KADNKKRNFLTHSEIESLLKAAN--TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K L+ E+++L+ AA+ A R CL + + G R SEI LR+ + Sbjct: 102 KKGRPLPKILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQK 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES---EWVFLSRKG--NPL 116 + + K G PL A+K++L IR + +A+ ++F S +G L Sbjct: 162 DPAYLIVK-GKGGTERLVPLNPSARAAIKDYLDIRPLFLNAKDKANPYLFCS-RGAEGHL 219 Query: 117 SRQQFYHIISTSGGNAGLSL-EIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVW 175 +R++ ++ + AG+ + PH+LRH+ L G D R++Q LGH +I T Sbjct: 220 TRRRVGQLLDEAALEAGIDPARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQV 279 Query: 176 YTASNAGRFYGIWDRARGRQRHAV 199 YT R + + + Sbjct: 280 YTHVATERLKEVVETHHPLSKRRA 303 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 4/196 (2%) Query: 4 KADNKKRNFLTHSEIESLLK--AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K + + +EIE +L ++ RN + + G R SE+ L++SD+D Sbjct: 106 KTEKKHKLPFSEAEIEKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDF 165 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES-EWVFLSRKGNPLSRQQ 120 + K I + K P++ + LK +L +R + +S +++FL + G + Sbjct: 166 EQKQIKVL-GKGDKERYIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYSTL 224 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 Y II++ ++ PH+LRHS L + G D +++ LGH ++ T YT ++ Sbjct: 225 VYRIINSYFSVVTTKKDVSPHVLRHSFASHLLDNGADLYTVKELLGHSSLASTQVYTNTS 284 Query: 181 AGRFYGIWDRARGRQR 196 + +A R + Sbjct: 285 LAELKKQYKKAHPRAK 300 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 7/199 (3%) Query: 3 NKADNKKRNFLTHSEIESLLK-AANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + L E+ +LL A R+ L L + G RA E+ L + I+ Sbjct: 116 PRKAQRLPYVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEF 175 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE-WVFLSRKGNPLSRQ 119 + + + K + P ++A+ +L R + AES+ +FLS+ G LS Sbjct: 176 DGERVRV-EGKGAKTRIVPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTS 234 Query: 120 QFYHIISTSGGNA-GLSLE--IHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + A G+S + PH LRHS L G D R IQ+ LGH +I T Y Sbjct: 235 DVRRRLRVWARQAAGVSTAGGVSPHALRHSFATHLLENGADLRSIQELLGHASISTTQVY 294 Query: 177 TASNAGRFYGIWDRARGRQ 195 T + R + + R Sbjct: 295 TRVESARLRSAYANSHPRA 313 >UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira RepID=XERC_LEPIC Length = 318 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 81/198 (40%), Gaps = 5/198 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHA---ARNYCLTLLCFIHGFRASEICRLRISDI 59 K + +E E +L+ + R+ + + + G R E+ +++ + Sbjct: 123 PKVRKEVPKNFRINETEEILEFESENASEVSEIRDRAMIEVLYSSGLRVFELVNAKLNSL 182 Query: 60 DLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQ 119 + + K + V +L+ +L R + ++E +FL+++G L+ + Sbjct: 183 SKDLTVLKVL-GKGRKERFVYFGKEAVSSLQKYLEYR-NVSFPDAEEIFLNQRGKKLTTR 240 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTAS 179 +I++ G I PH RH+ L + G + R +Q+ LGH ++ T Y + Sbjct: 241 GVRYILNERRKKMGWEKTITPHKFRHTFATDLLDAGAEIRAVQELLGHSSLSTTQIYLSV 300 Query: 180 NAGRFYGIWDRARGRQRH 197 + + ++ +A R Sbjct: 301 SKEKIKEVYRKAHPHARK 318 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 3/195 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPH-AARNYCLTLLCFIHGFRASEICRLRISDIDL 61 + + + LT+ ++ +L+ A R+ CL L + G R SEI L +DID Sbjct: 119 PRLPQELPSPLTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEITALNRADIDF 178 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSI-RTSYPHAESEWVFLSRKGNPLSRQQ 120 ++ ++I R K P+ VQ L+++L+ + + + FL+R G LS + Sbjct: 179 QSHLLHI-RGKGKKERIVPMTKVAVQWLQDYLNHPDRASVEQDHQACFLNRFGKRLSTRS 237 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 GLS I PH +RH+ G+D + IQ LGH ++ T YT + Sbjct: 238 IDRKFQQYLLKTGLSGSITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYTHVS 297 Query: 181 AGRFYGIWDRARGRQ 195 I D Sbjct: 298 MKLKKQIHDETHPHN 312 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 4/199 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K D K L+ EI ++K+ + P RN + LL G R SE+ L I+DI+ Sbjct: 97 PKTDKKLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINH 156 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESEWVFLSRKGNPLSRQQ 120 + + K PL + + +++ R+ + ++W+F+ G ++R+ Sbjct: 157 SVSNVSV-VGKGNKERLIPLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTREN 215 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 FY+I+ AG+ PHMLRH+ L D R IQ LGH++I T YT Sbjct: 216 FYNILQKLVIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYTHVT 275 Query: 181 AGRFYGIWDRARG-RQRHA 198 + +++ R Sbjct: 276 HRQILDDYNKYHPGNARRK 294 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 1/173 (0%) Query: 23 KAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLL 82 + R+ L L + G R SE L + D D A + + K PL Sbjct: 251 DTLHAEAIRRRDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVL-GKGSKERMSPLS 309 Query: 83 NKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHM 142 + V AL+ WL R +F+ +G+ L R+Q II AGL + PH Sbjct: 310 DTSVDALREWLHFRHHLASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHG 369 Query: 143 LRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 LRHS L G D R +Q+ LGH + T YT ++D+A R Sbjct: 370 LRHSFATHLLEAGADLRSVQELLGHARLATTQRYTHLTLAHLIEVYDKAHPRA 422 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 2/189 (1%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLK 62 K + ++++ E++ +L+A RN + L + G R SE+C L + DI L+ Sbjct: 107 PKTRRRIPEYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLE 166 Query: 63 AK-CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESE-WVFLSRKGNPLSRQQ 120 + + + K PL V+ + ++L R +P A +F+ +G P++R+ Sbjct: 167 SDPLVRVKSGKGDKDRIVPLTPDAVRIISDYLKHRDRFPDANRHIKLFVGIRGEPITRKS 226 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 ++ +HPH+ RHSC L G +++Q+ LGH NI T Y Sbjct: 227 VNKMLQNHVKKIFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIYLHIT 286 Query: 181 AGRFYGIWD 189 Sbjct: 287 DREKREAVR 295 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 84/255 (32%), Gaps = 62/255 (24%) Query: 1 MKNKADNKKRNFLTHSEIESLLKAANT--------------------------------- 27 M + LT S+ E LL A Sbjct: 103 MTPSIPSTLPAVLTESQAEQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSADT 162 Query: 28 ------------------GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIH 69 + RN + L + G R +E+ + I+DID + I + Sbjct: 163 VNRSEAPARADKRDNARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVT 222 Query: 70 RLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES---------EWVFLSRKGNPLSRQQ 120 K P +AL+ WL + +FL +G + ++ Sbjct: 223 -GKGNKQRVVPFGLPAQRALETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRI 281 Query: 121 FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN 180 I+ + AG+ +I PH LRHS + + G D R +Q+ LGH +++ T YT + Sbjct: 282 ARDIVHRAAREAGVP-DISPHALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVS 340 Query: 181 AGRFYGIWDRARGRQ 195 + + +A R Sbjct: 341 IEQLKNRYGQAFPRA 355 >UniRef50_A6G048 Site-specific recombinase, phage integrase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G048_9DELT Length = 346 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 20/214 (9%) Query: 2 KNKADNKKRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDID 60 + K K L ++ ++ G R+ L + + G R SE L ++D+ Sbjct: 101 RPKLGRKLPVALPVEDLTEMIDGEQRPGAVGLRDRALLEVLYGAGLRVSEAVALNLADLR 160 Query: 61 LKAK------CIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAES---------- 104 + + + + K PL K +A++ WL R Sbjct: 161 WEGSGDAARLTLRVLQGKGNKDRVVPLGRKGAEAMRAWLDTREGLLAPTPREGMRSPARI 220 Query: 105 ---EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLI 161 + VFL +G LS + ++ +G + PH LRHS L G D R I Sbjct: 221 DAGKAVFLGARGGRLSTRVAREVVYRRCQASGARAVVGPHGLRHSFATHLLQSGCDLRSI 280 Query: 162 QDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 Q LGH ++ T YT + G + +++RA R Sbjct: 281 QSMLGHASLSTTQRYTHLDMGHLFSLYERAHPRA 314 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 25 ANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNK 84 R L L + G R SE L + D+DL+A + K G PL Sbjct: 242 PAEAVRRLRATALLELLYGTGARISEAVGLDVDDLDLEAASVR-LHGKGGRDRIVPLGRY 300 Query: 85 EVQALKNWLSI-RTSYPHAES-EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHM 142 + A+ ++L + R + S VFLSR+GN LSRQ + ++ T+ AG+ + PH+ Sbjct: 301 AIAAVADYLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAGVEG-VSPHV 359 Query: 143 LRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL 200 LRHS L + G D R++Q+ LGH ++ T YT R ++ + R A L Sbjct: 360 LRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVTVDRLREVYAASHPRALGAAL 417 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 5/178 (2%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN-TGPHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + K + L+ E+ LL P R+ + L + G R SE+ L + I++ Sbjct: 101 PKIEKKAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINM 160 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTS--YPHAESEWVFLSRKGNPLSRQ 119 I G T P +AL ++L ES+W+F++ G +SRQ Sbjct: 161 TIGFITCSDS--GRERTIPFGRVAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQ 218 Query: 120 QFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYT 177 F+ II G AG+ +I PH LRHS L + G D + +Q LGH ++ T Y Sbjct: 219 GFWKIIKYYGEKAGIQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYA 276 >UniRef50_C8WGZ0 Integrase family protein n=4 Tax=Coriobacteriaceae RepID=C8WGZ0_EGGLE Length = 323 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 13/204 (6%) Query: 3 NKADNKKRNFLTHSEIESLL------KAANTGPH----AARNYCLTLLCFIHGFRASEIC 52 K + + S++ LL AA ARN L + G R SE Sbjct: 120 PKQPKSLPHVIRASDMVKLLTVYGKRDAAGREREQSSVDARNLALLEFLYACGARVSEAS 179 Query: 53 RLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEWVFLS 110 L +++D + + + K PL + V +++ + + + ++ F+S Sbjct: 180 GLLAANVDFGSGQVKVF-GKGSKERIVPLHDMAVSSMRAYATWARPLILRDRTCDYFFVS 238 Query: 111 RKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNI 170 +GN + + + AGL + PH +RH+ L + G D R +Q+ LGH ++ Sbjct: 239 TRGNRMGTDAIRKMFKDALRQAGLDESLSPHDMRHTFATDLLDGGADLRSVQEMLGHASL 298 Query: 171 RHTVWYTASNAGRFYGIWDRARGR 194 T YT + GR + R R Sbjct: 299 STTQIYTHLSPGRLKQVHARTHPR 322 >UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHC9_ACHLI Length = 306 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 7/201 (3%) Query: 3 NKADNKKRNFLTHSEIESLLKAANTG-PHAARNYCLTLLCFIHGFRASEICRLRISDIDL 61 K + + I L + +T P RN + L + G RASE+ L I DI L Sbjct: 102 PKVAKTLPHIIDEEAINYLFDSIDTSKPLGYRNLVILDLLYSCGVRASELINLEIKDIYL 161 Query: 62 KAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLS-IRTSYPHAESE----WVFLSRKGNPL 116 + I IH K L K ++ ++++LS +R + + +F++ KG PL Sbjct: 162 SSGQILIH-GKGKKDRYIILHEKLIEEIRHYLSFVRVTLLSKGDDTNQQKLFINYKGGPL 220 Query: 117 SRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWY 176 + + I++ ++G + IHPHMLRH+ + N G D R++Q+ LGH +++ T Y Sbjct: 221 TVRGLRVILNQMIKDSGETYAIHPHMLRHAFATTMLNHGADLRVVQELLGHEHLKSTQIY 280 Query: 177 TASNAGRFYGIWDRARGRQRH 197 T + + + + R +H Sbjct: 281 THVSKEQLKEKYMQTHPRNQH 301 >UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desulfovibrio RepID=Q311L4_DESDG Length = 332 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 17/210 (8%) Query: 3 NKADNKKRNFLTHSEIESLLK--------------AANTGPHAARNYCLTLLCFIHGFRA 48 + + L + ++L A+ R+ L L + G R Sbjct: 117 PRQAQRSPRALNVDQAYAVLDTRTQAASRAQVHVRQAHKREQLTRDLALAELLYGSGLRI 176 Query: 49 SEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE--SEW 106 SE L + D + I + K PL + QAL+ WL +R + + + Sbjct: 177 SEALALDLCHTDPSSGLIKVT-GKGSKERIVPLSDTSRQALQLWLDVRETLDVSGGAEQA 235 Query: 107 VFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLG 166 VFL +G L+R+Q II AGL + PH LRHS L G D R +Q+ LG Sbjct: 236 VFLGARGGRLNRRQALRIIEDLCRAAGLPQAVSPHALRHSFATHLLEAGADMRSVQELLG 295 Query: 167 HRNIRHTVWYTASNAGRFYGIWDRARGRQR 196 H + T YT + ++DRA + Sbjct: 296 HERLTTTQRYTHLTLRKIVEVYDRAHPGSK 325 >UniRef50_C2KRF2 Possible integrase/recombinase XerD n=2 Tax=Mobiluncus mulieris RepID=C2KRF2_9ACTO Length = 361 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 81/229 (35%), Gaps = 38/229 (16%) Query: 3 NKADNKKRNFLTHSEIESLLKAAN--------------------------------TGPH 30 K DN L+ +++ LL A P Sbjct: 135 PKPDNSLPTVLSEAQVARLLNTARLQAYSLGVHQKASKSQAEIPDSIPGDSAVPNRVNPV 194 Query: 31 AARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALK 90 R++ L L + G R SE+ LR+ DI I + K G P AL Sbjct: 195 GLRDWALLELLYATGVRVSELTGLRLRDISRSEATIRV-CGKGGKERVAPYGIPAGIALD 253 Query: 91 NWLSIRTSYPHAES----EWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHS 146 +L + EWVFL KG L + ++ AG+ ++ PH LRH+ Sbjct: 254 EYLEQGRPVLVSPDRDAGEWVFLGVKGGRLDTRLVRGMLHRMTAVAGVP-DLGPHGLRHT 312 Query: 147 CGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQ 195 L N G D R +Q+ LGH ++ T YT + ++ +A Sbjct: 313 AATHLLNGGADLRCVQEILGHASLGTTQRYTHLSTTHLRQVYLQAHPHA 361 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 3/189 (1%) Query: 9 KRNFLTHSEIESLLKAANT-GPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 L E+E L+++ T AR+ + + + G R SE+C + I + + + Sbjct: 109 LPRALARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGFTLDTI-AQGRWVP 167 Query: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIIST 127 + K+G P+ AL+ W+ + +F++ +G P++RQ + ++ Sbjct: 168 V-VGKRGRERLVPISAPARDALEQWVVRWRPQLAPKHRMLFVNLRGAPITRQGVWLVLKQ 226 Query: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 GL + PH+LRHS + G D R++Q+ LGH ++ T YT + G + Sbjct: 227 RASRVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHVDAV 286 Query: 188 WDRARGRQR 196 + RA R R Sbjct: 287 YQRAHPRAR 295 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.211 0.802 Lambda K H 0.267 0.0645 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,879,982,254 Number of Sequences: 3077464 Number of extensions: 118192287 Number of successful extensions: 383495 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 7229 Number of HSP's successfully gapped in prelim test: 4546 Number of HSP's that attempted gapping in prelim test: 355920 Number of HSP's gapped (non-prelim): 13319 length of query: 200 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 78 effective length of database: 664,945,748 effective search space: 51865768344 effective search space used: 51865768344 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.4 bits) S2: 91 (39.0 bits)