Phyre 2 alignment of P10378 with d1i1ga2

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Job Description | P10378
Confidence | 14.74% | Date | Thu Jan 5 11:32:10 GMT 2012
Rank | 90 | Aligned Residues | 49
% Identity | 16% | Template | d1i1ga2
SCOP info | Ferredoxin-like | Dimeric alpha+beta barrel | Lrp/AsnC-like transcriptional regulator C-terminal domain
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 443 | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | A | E | E | I | E | N | L | L | L | R | H | P | A | V | I | Y | A | A | L | V | S | M | E | D | E | L | M | G | E | K | S | C | A | Y | L | V | V | K | E | P | L | R | A | V | Q | V | R | R | F | L | R | E | Q | G | I | A | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
Template Sequence |  | K | L | F | E | V | A | E | K | L | K | E | Y | D | F | V | K | E | L | Y | L | S | . | . | . | . | . | S | G | D | H | M | I | M | A | V | I | W | A | K | . | . | . | D | G | E | D | L | A | E | I | I | S | N | K | . | I | G | K
Template Known Secondary structure |  | G |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  | . | . | . | . | . | S | S | S | S | S |  |  |  |  |  |  |  | S | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | . | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 100 | . | . | . | . | . | . | . | . | . |  |  |  | 110 | . | . | . | . | . | . | . | . | . | 120 | . |  | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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