15/01/2012 00:10:19 : INFO  : Run start: Sun Jan 15 00:10:18 GMT 2012
15/01/2012 00:10:21 : INFO  : Initialised job
15/01/2012 00:10:22 : INFO  : Renaming log file 'phyre2_20120115_001018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b49792f7b2cda9ea/phyre_20120115_001018.log'
15/01/2012 00:10:23 : INFO  : Initialised job:
Sequence
>batch____
MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADN
LACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIE
PALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSP
ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSS
PGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLA
SLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMC
PDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISID
PEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVV
KEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRASA

15/01/2012 00:10:23 : INFO  : Checked sequence
15/01/2012 00:10:25 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 00:10:26 : INFO  : PSI-BLAST 3 iterations
15/01/2012 00:14:03 : INFO  : PSI-BLAST 5 iterations
15/01/2012 00:20:27 : INFO  : Finished PSI-BLAST
15/01/2012 00:20:29 : INFO  : Running Buildali to generate a3m file
15/01/2012 10:09:14 : INFO  : Converting to HMM
15/01/2012 10:10:28 : INFO  : Calibrating HMM
15/01/2012 10:10:50 : INFO  : Searching HMM database
15/01/2012 10:22:35 : INFO  : Finished buildali
15/01/2012 10:22:36 : INFO  : Predicting secondary structure
15/01/2012 10:22:40 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 10:22:40 : INFO  : Predicting Disordered regions
15/01/2012 10:22:41 : INFO  : Predicted Disorder (Disopred)
15/01/2012 10:22:42 : INFO  : Running memsat_svm check
15/01/2012 10:25:35 : INFO  : Running memsat_svm full
15/01/2012 10:33:11 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b49792f7b2cda9ea'
15/01/2012 10:33:11 : INFO  : Initialising fold library search
15/01/2012 10:33:12 : INFO  : Initialised search input
15/01/2012 10:33:13 : INFO  : Building Ensemble models
15/01/2012 10:33:14 : INFO  : Building hh.d1mdba_.model.1.pdb
15/01/2012 10:33:18 : INFO  : Building d1mdba_.1.pdb
15/01/2012 10:33:22 : INFO  : Building d1pg4a_.2.pdb
15/01/2012 10:33:27 : INFO  : Building d1ry2a_.3.pdb
15/01/2012 10:33:32 : INFO  : Building c2vsqA_.4.pdb
15/01/2012 10:33:36 : INFO  : Building d3cw9a1.5.pdb
15/01/2012 10:33:39 : INFO  : Building c3e7wA_.6.pdb
15/01/2012 10:33:43 : INFO  : Building c3ni2A_.7.pdb
15/01/2012 10:33:47 : INFO  : Building d1amua_.8.pdb
15/01/2012 10:33:51 : INFO  : Building c3eynB_.9.pdb
15/01/2012 10:33:55 : INFO  : Building c3etcB_.10.pdb
15/01/2012 10:33:59 : INFO  : Building c1amuB_.11.pdb
15/01/2012 10:34:03 : INFO  : Building c2d1tA_.12.pdb
15/01/2012 10:34:07 : INFO  : Building c3dhvA_.13.pdb
15/01/2012 10:34:10 : INFO  : Building c3gqwB_.14.pdb
15/01/2012 10:34:14 : INFO  : Building c2v7bB_.15.pdb
15/01/2012 10:34:18 : INFO  : Building c3iteB_.16.pdb
15/01/2012 10:34:23 : INFO  : Building c3kxwA_.17.pdb
15/01/2012 10:34:27 : INFO  : Building d1lcia_.18.pdb
15/01/2012 10:34:31 : INFO  : Building c3tsyA_.19.pdb
15/01/2012 10:34:35 : INFO  : Building c3l8cA_.20.pdb
15/01/2012 10:34:48 : INFO  : Finished HH model building
15/01/2012 10:34:48 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 10:35:24 : INFO  : html domain output complete ID 'b49792f7b2cda9ea'
15/01/2012 15:08:47 : INFO  : Run end  : Sun Jan 15 15:08:46 GMT 2012
