BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (233 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteoba... 385 e-106 UniRef50_C4K7F6 Regulatory factor involved in inactivation of Dn... 355 7e-97 UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 ... 239 6e-62 UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesa... 209 5e-53 UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteu... 206 4e-52 UniRef50_Q3IIL0 Putative regulatory factor involved in inactivat... 204 2e-51 UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=... 203 3e-51 UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwell... 203 4e-51 UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria... 196 5e-49 UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepI... 196 6e-49 UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiell... 184 3e-45 UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 ... 182 1e-44 UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 ... 179 5e-44 UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine ... 179 9e-44 UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsul... 177 3e-43 UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 ... 174 1e-42 UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 ... 174 2e-42 UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermane... 169 9e-41 UniRef50_A3WKV5 ATPase involved in DNA replication initiation n=... 168 2e-40 UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitroco... 167 3e-40 UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n... 165 1e-39 UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 162 6e-39 UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 ... 162 7e-39 UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reineke... 160 4e-38 UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochro... 158 2e-37 UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 ... 155 8e-37 UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n... 152 6e-36 UniRef50_B4X369 Chromosomal replication initiator protein DnaA n... 145 8e-34 UniRef50_B9ZM52 DnaA regulatory inactivator Hda n=1 Tax=Thioalka... 145 1e-33 UniRef50_B4RZX5 Chromosomal replication initiator, DnaA like pro... 142 8e-33 UniRef50_Q1YP64 DnaA family protein n=1 Tax=gamma proteobacteriu... 140 3e-32 UniRef50_Q2Y5R8 Regulatory inactivation of DnaA Hda protein n=1 ... 136 5e-31 UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis K... 132 8e-30 UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothio... 131 2e-29 UniRef50_A4GJ90 Putative DNA replication factor n=1 Tax=uncultur... 130 5e-29 UniRef50_A4ACL3 DnaA-like protein hda n=1 Tax=Congregibacter lit... 129 6e-29 UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosom... 129 9e-29 UniRef50_B8KQC7 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 128 2e-28 UniRef50_A1TZ76 Regulatory inactivation of DnaA Hda protein n=3 ... 125 8e-28 UniRef50_Q0ADW8 Regulatory inactivation of DnaA Hda protein n=2 ... 125 8e-28 UniRef50_UPI0000E11700 DNA replication initiation factor n=1 Tax... 125 2e-27 UniRef50_Q31GT0 Regulatory inactivation of DnaA Hda protein n=1 ... 122 1e-26 UniRef50_B8KF04 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 121 2e-26 UniRef50_C6WT64 DnaA regulatory inactivator Hda n=1 Tax=Methylot... 119 9e-26 UniRef50_A9LYZ8 DnaA-related protein n=28 Tax=Neisseriaceae RepI... 118 1e-25 UniRef50_C5V5E1 DnaA regulatory inactivator Hda n=2 Tax=Betaprot... 118 1e-25 UniRef50_C1DC86 DnaA-related protein n=3 Tax=Neisseriaceae RepID... 116 5e-25 UniRef50_Q3BQY1 Replication related protein n=20 Tax=Xanthomonad... 115 2e-24 UniRef50_C6P7A5 DnaA regulatory inactivator Hda n=1 Tax=Sideroxy... 110 3e-23 UniRef50_C4KUE4 DnaA regulatory inactivator Hda n=66 Tax=Betapro... 110 4e-23 UniRef50_UPI0000E87A7A hypothetical protein MB2181_00330 n=1 Tax... 107 3e-22 UniRef50_A1AVU3 Regulatory inactivation of DnaA Hda protein n=3 ... 103 4e-21 UniRef50_A4SZR2 Regulatory inactivation of DnaA Hda protein n=2 ... 98 2e-19 UniRef50_A6T215 Uncharacterized conserved protein n=6 Tax=Betapr... 97 3e-19 UniRef50_Q47B71 Regulatory inactivation of DnaA Hda protein n=2 ... 96 1e-18 UniRef50_A6GSM4 Putative uncharacterized protein n=1 Tax=Limnoba... 95 2e-18 UniRef50_A1WIR8 Chromosomal replication initiator, DnaA n=19 Tax... 93 9e-18 UniRef50_B5EJC4 DnaA regulatory inactivator Hda n=2 Tax=Acidithi... 90 6e-17 UniRef50_A9I600 Chromosomal replication initiator protein dnaA n... 88 3e-16 UniRef50_Q3SM75 Putative uncharacterized protein n=1 Tax=Thiobac... 87 6e-16 UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n... 87 6e-16 UniRef50_C4KAD4 DnaA regulatory inactivator Hda n=1 Tax=Thauera ... 86 9e-16 UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (... 86 1e-15 UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n... 86 1e-15 UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n... 84 4e-15 UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n... 84 5e-15 UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n... 84 5e-15 UniRef50_Q1Q9M2 Regulatory inactivation of DnaA Hda protein n=4 ... 82 2e-14 UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n... 81 3e-14 UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n... 81 3e-14 UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n... 81 3e-14 UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n... 80 6e-14 UniRef50_B1Y0G7 DnaA regulatory inactivator Hda n=1 Tax=Leptothr... 79 1e-13 UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n... 79 1e-13 UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n... 79 2e-13 UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n... 78 2e-13 UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n... 78 3e-13 UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n... 76 1e-12 UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n... 75 1e-12 UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n... 75 2e-12 UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n... 75 2e-12 UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n... 74 3e-12 UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n... 74 3e-12 UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n... 74 4e-12 UniRef50_B2HWV0 ATPase involved in DNA replication initiation n=... 73 6e-12 UniRef50_Q1GFH7 Chromosomal replication initiator DnaA n=6 Tax=R... 73 7e-12 UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n... 73 9e-12 UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n... 72 1e-11 UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n... 72 1e-11 UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n... 72 1e-11 UniRef50_C0VIG7 DnaA family chromosomal replication initiator n=... 72 1e-11 UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n... 72 2e-11 UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n... 72 2e-11 UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n... 72 2e-11 UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n... 71 2e-11 UniRef50_C7I3Q1 Sigma 54 interacting domain protein (Fragment) n... 71 3e-11 UniRef50_B6IN53 Putative uncharacterized protein n=1 Tax=Rhodosp... 71 3e-11 UniRef50_UPI0001BCD63C chromosomal replication initiation protei... 70 4e-11 UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n... 70 5e-11 UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n... 70 6e-11 UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n... 69 1e-10 UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n... 69 1e-10 UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n... 69 2e-10 UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n... 69 2e-10 UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n... 68 2e-10 UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n... 68 2e-10 UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n... 68 2e-10 UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n... 68 3e-10 UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n... 68 3e-10 UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n... 68 3e-10 UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n... 68 3e-10 UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n... 67 3e-10 UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n... 67 3e-10 UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n... 67 3e-10 UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n... 67 4e-10 UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n... 67 5e-10 UniRef50_A0LA20 Regulatory inactivation of DnaA Hda protein n=1 ... 67 5e-10 UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n... 67 6e-10 UniRef50_D1R6Y2 Chromosomal replication initiator protein dnaA n... 66 8e-10 UniRef50_UPI0000D54827 hypothetical protein P700755_25226 n=1 Ta... 66 8e-10 UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 ... 66 8e-10 UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n... 66 9e-10 UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n... 66 9e-10 UniRef50_C7H083 Chromosomal replication initiator protein dnaA n... 66 9e-10 UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n... 66 9e-10 UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n... 66 1e-09 UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n... 66 1e-09 UniRef50_Q0FEK0 Putative uncharacterized protein n=1 Tax=Rhodoba... 66 1e-09 UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n... 65 1e-09 UniRef50_A3PMH2 Chromosomal replication initiator, DnaA n=7 Tax=... 65 1e-09 UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n... 65 1e-09 UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n... 65 2e-09 UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n... 65 3e-09 UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n... 65 3e-09 UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n... 64 3e-09 UniRef50_UPI000185BFFA chromosomal replication initiator protein... 64 3e-09 UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n... 64 3e-09 UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n... 64 4e-09 UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n... 64 4e-09 UniRef50_B2V628 Chromosomal replication initiator protein dnaA n... 64 5e-09 UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n... 64 5e-09 UniRef50_Q6MC93 Chromosomal replication initiator protein dnaA 1... 64 5e-09 UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n... 63 6e-09 UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n... 63 7e-09 UniRef50_D2LBJ7 Putative uncharacterized protein n=1 Tax=Rhodomi... 63 1e-08 UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n... 62 1e-08 UniRef50_A7H675 Chromosomal replication initiator protein dnaA n... 62 1e-08 UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n... 62 2e-08 UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n... 62 2e-08 UniRef50_Q0FQP8 Putative uncharacterized protein n=1 Tax=Roseova... 61 3e-08 UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n... 61 3e-08 UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n... 61 4e-08 UniRef50_A0Z8U4 DNA replication initiation factor (Fragment) n=1... 61 4e-08 UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n... 61 4e-08 UniRef50_C8N934 Chromosomal replication initiator protein dnaA n... 61 4e-08 UniRef50_A9E209 Putative uncharacterized protein n=2 Tax=Rhodoba... 60 5e-08 UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n... 60 5e-08 UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n... 60 6e-08 UniRef50_B0S416 Chromosomal replication initiator protein dnaA n... 60 6e-08 UniRef50_C7M114 Chromosomal replication initiator protein dnaA n... 60 7e-08 UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n... 60 7e-08 UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n... 60 7e-08 UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein... 59 1e-07 UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n... 59 1e-07 UniRef50_A8LQU3 Chromosomal replication initiator n=1 Tax=Dinoro... 59 2e-07 UniRef50_B3CMG6 Chromosomal DNA replication initiator-related pr... 59 2e-07 UniRef50_C8P211 Chromosomal replication initiator protein dnaA n... 59 2e-07 UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n... 59 2e-07 UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n... 58 2e-07 UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n... 58 2e-07 UniRef50_Q9Z8M9 Chromosomal replication initiator protein dnaA 1... 58 2e-07 UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n... 58 3e-07 UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n... 57 3e-07 UniRef50_UPI0001C36FC2 chromosomal replication initiation protei... 57 4e-07 UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n... 57 4e-07 UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n... 57 5e-07 UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n... 57 5e-07 UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n... 57 5e-07 UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n... 57 6e-07 UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n... 57 6e-07 UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n... 57 6e-07 UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n... 56 1e-06 UniRef50_A9G073 Chromosomal replication initiator, DnaA n=16 Tax... 56 1e-06 UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultur... 56 1e-06 UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n... 56 1e-06 UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n... 56 1e-06 UniRef50_B4U623 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_C8W8K4 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_B9KLX6 Chromosomal replication initiator, DnaA n=1 Tax=... 55 2e-06 UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n... 55 2e-06 UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n... 55 3e-06 UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n... 55 3e-06 UniRef50_O66659 Chromosomal replication initiator protein dnaA n... 55 3e-06 UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n... 54 3e-06 UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n... 54 3e-06 UniRef50_Q3YSR1 Chromosomal DNA replication initiator-related pr... 54 3e-06 UniRef50_Q2CCM0 Putative uncharacterized protein n=1 Tax=Oceanic... 54 3e-06 UniRef50_B3CUN8 DnaA homologue Had protein n=2 Tax=Orientia tsut... 54 3e-06 UniRef50_A8TLA0 Putative uncharacterized protein n=1 Tax=alpha p... 54 4e-06 UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n... 54 4e-06 UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n... 54 4e-06 UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n... 54 5e-06 UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n... 54 5e-06 UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n... 54 5e-06 UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n... 54 6e-06 UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n... 54 6e-06 UniRef50_Q5FPM3 DnaA-related protein n=1 Tax=Gluconobacter oxyda... 54 6e-06 UniRef50_B3E469 Chromosomal replication initiator DnaA n=1 Tax=G... 54 6e-06 UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n... 53 6e-06 UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n... 53 6e-06 UniRef50_A8F346 Chromosomal replication initiator protein dnaA n... 53 8e-06 UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n... 53 9e-06 UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n... 53 9e-06 UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n... 52 1e-05 UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n... 52 1e-05 UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n... 52 1e-05 UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n... 52 1e-05 UniRef50_Q28TI8 Chromosomal replication initiator DnaA n=1 Tax=J... 52 1e-05 UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n... 52 2e-05 UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n... 52 2e-05 UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax... 52 2e-05 UniRef50_Q607X3 DnaA domain protein n=1 Tax=Methylococcus capsul... 51 3e-05 UniRef50_B5K4Z6 Chromosomal replication initiator, DnaA n=2 Tax=... 51 3e-05 UniRef50_Q6KIT7 Chromosomal replication initiator protein dnaA n... 51 4e-05 UniRef50_Q0AQ96 Regulatory inactivation of DnaA Hda protein n=1 ... 51 4e-05 UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n... 51 4e-05 UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n... 50 4e-05 UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n... 50 4e-05 UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n... 50 4e-05 UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n... 50 5e-05 UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n... 50 5e-05 UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n... 50 6e-05 UniRef50_UPI0000D537C1 Chromosomal replication initiator protein... 50 8e-05 UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=... 50 9e-05 UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n... 50 9e-05 >UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteobacteria RepID=HDA_PROMH Length = 248 Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/233 (77%), Positives = 211/233 (90%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +NTP+QLSLPL LPDDETF SF+ G+N+SL+AA+Q + Q H YIY W+R+G G+SHLL Sbjct: 16 LNTPSQLSLPLSLPDDETFDSFYAGENASLVAAIQTAIHQSHGSYIYFWSRDGGGKSHLL 75 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACAELS GDAVGYVPLDKR +FVP+VL+GMEHLSLVCIDN++CIAGDE WE+A+F+L Sbjct: 76 HAACAELSLAGDAVGYVPLDKRAYFVPDVLEGMEHLSLVCIDNVQCIAGDEEWELALFNL 135 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+LE G+T LLITGDRPPRQ++L LPDLASRLDWGQIY+LQPLSDE+K+QALQLRA+L Sbjct: 136 YNRVLELGRTCLLITGDRPPRQIDLQLPDLASRLDWGQIYRLQPLSDEEKIQALQLRAKL 195 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPEDVGRF+LKRLDR+MRTLF LD+LD ASI AQRKLTIPFVK+ILKL Sbjct: 196 RGFELPEDVGRFVLKRLDRKMRTLFEMLDELDHASIVAQRKLTIPFVKDILKL 248 >UniRef50_C4K7F6 Regulatory factor involved in inactivation of DnaA n=4 Tax=Enterobacteriaceae RepID=C4K7F6_HAMD5 Length = 246 Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 169/233 (72%), Positives = 200/233 (85%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +N P QL LPL+LPDD TF+ F+PGDNS+LLAA+++ L H YIY W+++G+GRSHLL Sbjct: 14 LNNPTQLPLPLFLPDDATFSGFYPGDNSALLAAIESALCDSHGRYIYFWSKQGSGRSHLL 73 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAAC+ LS++G AVGYVPLDKR +F EVL+GME L+L+CIDNIE I GD WEM IF L Sbjct: 74 HAACSTLSKQGKAVGYVPLDKRAYFTVEVLEGMEQLALICIDNIEHIVGDIEWEMGIFHL 133 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNRILE T LL+TGDRPPRQL+L LPDLASRLDWGQIYKLQPLSD+DK+ +LQLRA+L Sbjct: 134 YNRILEKDHTCLLMTGDRPPRQLHLHLPDLASRLDWGQIYKLQPLSDDDKVLSLQLRAKL 193 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPE+VGRF+LKRLDREM +LFM LD+LD+ASI AQRKLTIPFVKEIL+L Sbjct: 194 RGFELPEEVGRFMLKRLDREMPSLFMALDRLDKASIRAQRKLTIPFVKEILRL 246 >UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 Tax=Shewanella RepID=A1S6W5_SHEAM Length = 241 Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 115/233 (49%), Positives = 159/233 (68%), Gaps = 1/233 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPG-DNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + P QLSLP++LPDDETF S++P N L+ AL++ + IYLW +GR+HL+ Sbjct: 9 HPPLQLSLPVHLPDDETFTSYYPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLI 68 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACA ++ Y+PL +L+G+E L+CID+++ +AG LWE AIFDL Sbjct: 69 HAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDL 128 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+ E + L+++ P + LPDL SR+ WG Y+LQP+ D++KL ALQ RA + Sbjct: 129 YNRVAEQKRGSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAM 188 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG +LPEDVGRFLL R+ R++RTLF LD+LD+AS+ QRKLTIPFVKE+L+L Sbjct: 189 RGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQRKLTIPFVKEMLRL 241 >UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH23_9GAMM Length = 234 Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 102/232 (43%), Positives = 144/232 (62%), Gaps = 1/232 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 N P Q+ L + L DD F +F+ N + A L+ + + ++W EG G +HLL Sbjct: 4 NHPFQIPLSVSLRDDARFENFYAQGNELVCATLKAAAQGTGEQFTFIWGNEGVGCTHLLQ 63 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A C E G + Y+PLD+ +L+GME L LVC+D ++ +AGD WE+A+F + Sbjct: 64 AICHEAEPLGRSAAYLPLDELKHMGSGILEGMEFLDLVCLDAVQSVAGDRDWEVALFHFF 123 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NRI E G T L+I PR L + LPDLASRL WG ++++QPLSD+ KL+A+Q+RA R Sbjct: 124 NRIREQGNT-LVIASTSAPRYLGISLPDLASRLSWGMVFQVQPLSDDTKLKAIQMRASAR 182 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 G E ++V RFLL R M L LD LD+AS++A+RK+TIPF+KE+ L Sbjct: 183 GLEFSDEVARFLLHHASRNMNDLTSLLDTLDQASLSAKRKVTIPFIKEVTGL 234 >UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteurellaceae RepID=Y122B_HAEIN Length = 231 Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 107/228 (46%), Positives = 149/228 (65%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL LP++ DD T +F+ +N LL +L+ + Y+W +G+G++HLL A Sbjct: 4 QLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSN 63 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E YVPL K +F VL+ +E LVC+D+++ + G++ WE+AIFDL+NRI Sbjct: 64 EYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIK 123 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 SGKT LLI+ D+ P L++ LPDL SRL WG+IY+L L+DE K++ LQL A RGF+L Sbjct: 124 ASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRGFQL 183 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++ FL+ RL R+M TLF LD LD+AS+ AQR LTIPFVK+IL L Sbjct: 184 SDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL 231 >UniRef50_Q3IIL0 Putative regulatory factor involved in inactivation of DnaA n=3 Tax=Alteromonadales RepID=Q3IIL0_PSEHT Length = 228 Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 103/229 (44%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ--EHSGYIYLWAREGAGRSHLLHAAC 64 ++LP+ LPDDETF S++ G++S ++ L++ + + Y YL +G+SHLL+A C Sbjct: 1 MALPVTLPDDETFTSYFGGEDSLEVSHLKDSFSKLSQSFQYTYLCGLGDSGKSHLLYATC 60 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + +RG + + + + F P VL+G+E L ++CID++ +AGD+ WE A+F+ +NR Sbjct: 61 IQAQERGLSNMLLSMREVIDFGPMVLEGLEALDVLCIDDVHLVAGDDAWEKALFNFFNRF 120 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E K L++T D P LN+ LPDL SRL WG +++ +SD+DK QAL R ++RG E Sbjct: 121 NEPKKM-LVVTADLLPDMLNISLPDLESRLKWGTTLQIRSMSDDDKAQALVKRTKMRGLE 179 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 L ++ RFLL RL R+MRTL LD+LD AS+ AQRKLTIPF+K LKL Sbjct: 180 LSDECARFLLTRLSRDMRTLLDVLDKLDHASMAAQRKLTIPFIKSTLKL 228 >UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=A9KBZ5_COXBN Length = 260 Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 103/228 (45%), Positives = 149/228 (65%), Gaps = 2/228 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L ++ TFA+F+ G+N +LL AL +L + +IYLW GR+HLL A C Sbjct: 27 QLPLRVQLREETTFANFYGGNNITLLKALNELLEGKGESFIYLWGEPSVGRTHLLQACCH 86 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 ++ R Y+PL K P +L G+E L+CID+I+ + WE A+ YNR+ Sbjct: 87 TMNNRSLEAMYLPL-KTPQLAPSILQGLESKPLICIDDIDAVLSQPDWEEALLHFYNRVR 145 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 ES + +L+I G+ P QLN L DL SRL WG ++++ L+D +K++ALQ+RA RGFEL Sbjct: 146 ES-QVKLVIAGNYVPPQLNCQLADLRSRLSWGLVFQVIGLTDAEKIKALQMRAHDRGFEL 204 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++VG+FLL+ R+M LF LD+LD+AS+ AQRKLT+PFVKE+L + Sbjct: 205 SDEVGQFLLRHYPRDMSALFNLLDKLDQASLIAQRKLTVPFVKEVLNI 252 >UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Z80_COLP3 Length = 235 Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG--YIYLWAREGAGRSH 58 M AQL+L + LPDDETF SF N ++ L++ + + S YL+ G+SH Sbjct: 1 MKQVAQLTLMVQLPDDETFDSFKSDINQGVVTQLKSYIESQQSTPHSFYLFGLSSVGKSH 60 Query: 59 LLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L+HA+ +Q G + + + EVLDG+E + L+C+D+I IAGD W+ AIF Sbjct: 61 LMHASSTYAAQIGKSSVCLSCAELKQLPVEVLDGLEQIDLICLDDIHLIAGDTRWQQAIF 120 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 DL+NR+LE LLI+GD +QL + LPDL SRL WG +++P+ DE+K+ ALQ RA Sbjct: 121 DLFNRVLEQNN-YLLISGDESAQQLGISLPDLVSRLTWGLTEQVKPVDDEEKVIALQYRA 179 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG L ++V +FLL RL R+M +L +LD LD+ASI QRK+TIPF+KE+L L Sbjct: 180 TQRGLFLSDEVVKFLLNRLSRDMGSLINSLDVLDKASIQEQRKITIPFIKEVLTL 234 >UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria RepID=Q4ZQ54_PSEU2 Length = 261 Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 104/231 (45%), Positives = 148/231 (64%), Gaps = 4/231 (1%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLL 60 P QL L + L DD TF +++PG N++ L ++ + + IYLW ++G GR+HLL Sbjct: 30 PIQLPLSVRLRDDATFVNYYPGANAAALGYVERLCEADAGWTESLIYLWGKDGVGRTHLL 89 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC Q G+ Y+PL + E+ D +E LVC+D+++ I G WE A+F L Sbjct: 90 QAACLRFEQLGEPAVYLPLAEVIDEGIELFDHLEQYELVCLDDLQAIVGKPDWEEALFHL 149 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR+ +SG+ RLLI + PR+L + LPDL SRL +++++ LSDEDKL+ALQLRA Sbjct: 150 FNRLRDSGR-RLLIAASKSPRELPVKLPDLKSRLTMALVFQMRGLSDEDKLRALQLRASR 208 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L +DVG F+L R R M LF L++LD+AS+ +RKLTIPF+KE L Sbjct: 209 RGLHLTDDVGHFILTRGTRSMSALFELLERLDQASLQEKRKLTIPFLKETL 259 >UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepID=Q5ZRS8_LEGPH Length = 245 Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 101/228 (44%), Positives = 148/228 (64%), Gaps = 1/228 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + L D+ T F G+N+ L L +L + +YLW +G+G+SHLL A C Sbjct: 19 QLALAIKLNDEATLDDFNWGNNTLLQQQLIEMLSFKADRLLYLWGPKGSGKSHLLQACCQ 78 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 ++ A+ Y+PL + P+ ++G+E +L+CID+I IA D WE A+F LYN+I Sbjct: 79 AINLTQSAI-YLPLAFLKEWGPQSIEGLEDQTLICIDDINTIANDSAWEEALFHLYNKIK 137 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 +S ++ L+I+G++PP + ++ L DL SRL WG + +L L+D++K+ L++RA RGFEL Sbjct: 138 DSERSLLIISGNQPPIKCDIKLADLRSRLSWGLVIQLNELNDDEKINTLKMRAAKRGFEL 197 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 PE VG FLL R R M L+ L+QLD AS A RK+TIPFVK ILK+ Sbjct: 198 PESVGHFLLNRCSRNMHDLYEILNQLDDASWEAHRKITIPFVKNILKI 245 >UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCV1_KANKD Length = 229 Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 103/230 (44%), Positives = 147/230 (63%), Gaps = 5/230 (2%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L D TFA+F G+N LL L+ + + E S +IY+++ +G GRSHLL A Sbjct: 3 QLPLDIELHSDATFANFMVGENQLLLQKLEAICQGE-SDFIYIYSEQGHGRSHLLQALTH 61 Query: 66 ELSQRG--DAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 S++ + Y+PL+ + VP++LDG+ V +D IE + D+ W+ AIF+LYN+ Sbjct: 62 AYSEQNPDKLIAYLPLE-NSMLVPQMLDGLVAFDCVSLDGIEKVIADKEWQTAIFNLYNQ 120 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + E GK+ LITG P QL L L DL SRL IY ++PL+DE+KL LQ +A +G Sbjct: 121 LKEQGKS-FLITGLNAPSQLALELKDLKSRLSAMFIYNIKPLNDEEKLILLQRKAEEKGL 179 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 EL +V +LL R R++ TL LD+LD+AS+ A+RKLTIPF+KE+L L Sbjct: 180 ELSNEVAHYLLARQQRDLPTLLGILDKLDQASLQAKRKLTIPFIKEVLGL 229 >UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SY5_PSEA6 Length = 237 Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 5/233 (2%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLW-----AREGAGRSHLL 60 QLSL + L D ETF SF G+N L+ L+++L + + W G G+SHLL Sbjct: 4 QLSLAVNLRDTETFDSFIVGENLHLVHRLKSLLNKTLNTKNQPWLTFVSGDHGVGKSHLL 63 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 ++ C + + Y+ + + PEVLDG+EH L+C+D+ + + + W++A+FDL Sbjct: 64 YSLCHKAQSANVSAVYLSFKDKQQYSPEVLDGLEHSQLICLDDADALQDSQTWQIAVFDL 123 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 NR+ E G++ +++ + P LNL L DLASRL WG + L LSDE + AL RAR Sbjct: 124 LNRVKELGRSHVVVCANGGPTSLNLQLADLASRLAWGVSFTLASLSDEGRCVALLTRARQ 183 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG +PE V +L+ R+M +L TLD+LD+ S+ QRKLTIPFVKE L L Sbjct: 184 RGLVMPEKVAMYLVNHWQRDMPSLMNTLDKLDQLSLQQQRKLTIPFVKEALNL 236 >UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABB5_ALHEH Length = 245 Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 142/235 (60%), Gaps = 6/235 (2%) Query: 2 NTPA----QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 NT A QL+L + D + SF G N L A++ ++L+ + G+S Sbjct: 7 NTSAPPVQQLALDIRWTDIASLDSFVAGANQQALDAVRRAAMGFGDRLLFLYGQGPVGKS 66 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMA 116 HLL AAC E +RG Y+PL++ P VL GME + L+ +D+++ +AG+ WE Sbjct: 67 HLLQAACREAGERGFKAAYLPLNEFQGMPPGSVLAGMESMDLLALDDLQVLAGEADWEEH 126 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F L+NR SG ++++ DR P L+L LPDLASRL WG +L+PL D KLQ LQ Sbjct: 127 FFYLFNRTRASGG-HMILSADRRPVDLSLVLPDLASRLQWGLTLRLEPLDDVGKLQGLQA 185 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RA RG ELP+D GRFLL R R++ LF LD+LD AS+ AQR+LTIPFV+++L Sbjct: 186 RAAARGLELPDDTGRFLLSRYARDLGGLFQLLDRLDGASLAAQRRLTIPFVRQVL 240 >UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YE57_9GAMM Length = 252 Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 3/228 (1%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L DD TF +F+ GDN+ LL L+ L + Y+YL+ REG+GRSHLL AAC Sbjct: 26 QLPLAVQLRDDATFDNFYSGDNALLLDTLRKQL-SDGERYVYLFGREGSGRSHLLQAACH 84 Query: 66 ELSQRGDAVGYVPLDKRTWFVPE-VLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + G Y+PL + + PE + DG+E+ SLVC+D+++ + LW+ +F L+NR Sbjct: 85 HADKNGSNAIYLPLSELGEYPPEELFDGLEYQSLVCLDDVDAVIDKGLWQRQLFHLFNR- 143 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 L + LLI+ R LN+ L DLASRL WG +++L L+D+ + ++LRA RG Sbjct: 144 LSDAQIPLLISARCAVRDLNIELQDLASRLSWGTVFQLHNLNDDQRTATIKLRAERRGLL 203 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++V +++ R R+ + L LD LD AS+T QR+LT+PFVK+ + Sbjct: 204 MGDEVAQYIYNRCRRDTQALLSVLDTLDSASLTYQRRLTVPFVKKTMN 251 >UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsulatus RepID=Q604L7_METCA Length = 232 Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 141/226 (62%), Gaps = 3/226 (1%) Query: 9 LPLYLPDD--ETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAE 66 +PL+ D +TF ++W G N+ A + R E +YLW G G++HL++AAC E Sbjct: 5 IPLHFAVDPLQTFEAYWAGPNAEAAEAARRSARGEGDTLLYLWGDTGLGKTHLVNAACRE 64 Query: 67 LSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILE 126 G + +PL P VL+GME+ +LVC+D+I+ IAG + WE +F L+N + + Sbjct: 65 AFHNGRSAACLPLALIGECGPAVLEGMENQNLVCLDDIDTIAGRDDWERQLFGLFNAMRD 124 Query: 127 SGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELP 186 +G T LLIT PP +L + LPDL +RL WG + +L PL+DE KL AL+ RA + G +L Sbjct: 125 AGNT-LLITATAPPAELPVALPDLKTRLAWGLVLRLHPLTDEHKLAALERRAGMLGLDLS 183 Query: 187 EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 VGRFLL R+M +L L++LD AS+ A+R+LT+PF+K L+ Sbjct: 184 PRVGRFLLSHCRRDMASLQALLEELDHASLAAKRRLTVPFIKGYLE 229 >UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 Tax=Alteromonadales RepID=Q21MC1_SACD2 Length = 239 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 136/235 (57%), Gaps = 4/235 (1%) Query: 2 NTPAQLSLPLYLPDDETFASFWP--GDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 +TP QLSL + L ++ TFA+F G N+ +AALQ E + +W G+G +HL Sbjct: 6 STPVQLSLGVSLREETTFANFLGAVGSNAQPVAALQQFAANEGEQNVLVWGAPGSGLTHL 65 Query: 60 LHAACAELSQRGDAVGYVPL-DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L A C + G AV Y+PL D + + DG+E + +VC+D I+ I G + WE +F Sbjct: 66 LQAVCHRAYEHGLAVQYLPLQDMVGYDAQSICDGLEQMQVVCLDGIDHICGIKSWEQGVF 125 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 LYN + ++G RLLI P L L LPDL SR+ Y ++ L+D K AL RA Sbjct: 126 HLYNNLRDAGH-RLLIASHTSPPALPLTLPDLKSRVLGSVRYHVESLNDLQKQDALIARA 184 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG ++P +V RF+L R R+ LF LDQLD AS+ QRKLT+PF KE+L L Sbjct: 185 VARGMDMPVEVARFILNRASRDTNELFYLLDQLDDASLQKQRKLTVPFAKEVLNL 239 >UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 Tax=Nitrosococcus oceani RepID=Q3JBV7_NITOC Length = 232 Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 141/229 (61%), Gaps = 2/229 (0%) Query: 6 QLSLPLYLPDDETFASFW-PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL LP+ +F +++ N +AA++ + + ++ L G G++HLL AAC Sbjct: 5 QLPLPIGDSGAPSFENYYLAAANRESVAAVERCGQGKGDRFLCLRGPSGVGKTHLLLAAC 64 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 +Q+G+ V YVPL + PE+L G+E + V ID+I+ IAG WE ++ LYN + Sbjct: 65 QIAAQKGERVAYVPLKRAVIMAPEILGGLEVAAFVAIDDIDHIAGYRHWEESLLHLYN-L 123 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 L+ G+ RLL+ P L+ LPDL SRL WG Y+LQPL D K ALQ +A RG E Sbjct: 124 LQEGRGRLLLASTDKPSTLHWLLPDLRSRLGWGLGYQLQPLDDHQKHAALQFQAAKRGLE 183 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 LP++V FLL+ +R+M +L L QL+RAS+ AQR+LT+PFV+++L + Sbjct: 184 LPDEVAGFLLRHSERDMHSLSSILAQLERASMAAQRRLTVPFVRQVLDI 232 >UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N6W0_9GAMM Length = 232 Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 143/233 (61%), Gaps = 5/233 (2%) Query: 1 MNTPAQLSLPLYLPDDETFASFWP--GDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSH 58 M QL L + L D+ TF +F+ L A L + + E S I+++ G G SH Sbjct: 1 MQVVEQLPLGVQLRDEATFENFYALQSQEVKLQAQLAAIGKGEQS--IFIYGESGCGTSH 58 Query: 59 LLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 LL AAC E Y+PL++ + P V + +E+L L+ +DN++ IAG WE A+F Sbjct: 59 LLQAACHEAQTHDLNSVYLPLEELVEYSPAVFESLENLPLIALDNMQAIAGLPAWEEAVF 118 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L+NR+ ++G +++ + L + L DL SRL WG +Y+L L++EDK+ AL+LRA Sbjct: 119 HLFNRVRDNG-GHIIMAANDSIEGLGIKLADLKSRLHWGLVYELPELTEEDKMAALKLRA 177 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG EL +DV ++++++++ M +F L+QLD+AS++A+RK+T PFVK+++ Sbjct: 178 HNRGLELGDDVAKYVVRQMEGHMDKMFEALNQLDKASLSAKRKVTRPFVKDVM 230 >UniRef50_A3WKV5 ATPase involved in DNA replication initiation n=2 Tax=Idiomarina RepID=A3WKV5_9GAMM Length = 242 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/236 (39%), Positives = 141/236 (59%), Gaps = 7/236 (2%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSG--YIYLWAREGAGRSH 58 P QL+L + LPDDE F ++ N +++ L+ + + E G L G+G+SH Sbjct: 8 PQQLTLAVQLPDDENFTTYLEQQNDNVVRWLKQIATKPLSETQGERLTLLSGPSGSGKSH 67 Query: 59 LLHAACAELSQRGDAVGYVPL-DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 LLH+ + L+ + V Y+PL D + +VL G++ +++C+D+I+ + D W + Sbjct: 68 LLHSIVS-LAGQHTQVMYLPLADLKESNAEQVLAGLDAFNIICLDDIDTVLKDPTWCYEL 126 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F L N I ++ RL++T QL++ L DL SRL W ++L PL+D+ K AL LR Sbjct: 127 FKLINTITDAEHCRLMMTAHASASQLSVELADLRSRLQWATAFQLSPLNDDGKASALTLR 186 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 A+ RG +LP DV F+L RL R+M L LDQLD+ASI QRKLTIPFVK++L + Sbjct: 187 AQWRGLQLPHDVAIFMLHRLGRDMAGLLAHLDQLDKASIAHQRKLTIPFVKQVLAI 242 >UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSN5_9GAMM Length = 244 Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/226 (40%), Positives = 135/226 (59%), Gaps = 1/226 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + FA F G N+ +AAL+ + + + IYL+ G G+SHLL AAC Sbjct: 14 QLALDFQWDERFDFAGFVAGPNAEAVAALELIGKGDRRRVIYLYGEPGVGKSHLLQAACG 73 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E S G AV Y+PL + P +L +E + +V +D+++C+ W+ A F L+NR+ Sbjct: 74 EASAWGRAVVYLPLRQLVNRSPRLLQELEGVDVVALDDLDCLTKAIEWQQAAFHLFNRLQ 133 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 ++G+ LL+ G R P +L L LPDL SRL + +L+ L DED + AL RA+ RG EL Sbjct: 134 DAGRE-LLMAGPRRPAKLGLALPDLVSRLQGVLVLRLEKLGDEDNVLALSRRAQRRGLEL 192 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 P+ R+LL R+ F LD+ D AS+ AQR+LT+PFVK++L Sbjct: 193 PKATARYLLNHCRRDTGYFFQLLDKFDAASLQAQRRLTVPFVKKVL 238 >UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n=2 Tax=Gammaproteobacteria RepID=Q2Z072_9GAMM Length = 243 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/228 (40%), Positives = 138/228 (60%), Gaps = 6/228 (2%) Query: 6 QLSLPLYLPDDETFASFWPGDNSS-LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L ++L DD T +F S L++ALQ+ + + IY++ GAG+SHLL A+C Sbjct: 18 QLPLEIHLRDDATMDNFLTVSRSQPLVSALQHQMDADGEAIIYVYGPPGAGKSHLLQASC 77 Query: 65 AELSQRGDAVGYVPLDK-RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + R + + Y+PL + R + EV+ G+E L VCID+++ + GD WE+A+F+ N Sbjct: 78 H--AGRAETL-YLPLAELRQFPGQEVMQGVERLDRVCIDDVQAVLGDADWELALFNFCNG 134 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + G R+++ GD PR L + L DL SRL WG +Y+L SDE+K+ L+ RA RG Sbjct: 135 ARQRG-CRMVVAGDAAPRALAVNLADLRSRLSWGIVYQLAEGSDEEKVDILRFRATRRGL 193 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L + V F++ R R L M LDQLD+ S+ QR L+IPFVKE++ Sbjct: 194 SLSKSVATFIVSRAPRATEQLLMVLDQLDKHSLARQRALSIPFVKEVM 241 >UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ7_9GAMM Length = 234 Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 94/235 (40%), Positives = 130/235 (55%), Gaps = 6/235 (2%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAAL---QNVLRQEHSGYIYLWAREGAGRS 57 MNT QL L + P+ F +WPG +S+ AL Q R E +L+ E G++ Sbjct: 1 MNT--QLLLGIQAPEYARFERYWPGADSNNCLALELCQQAARNEGERQCFLYGDEAVGKT 58 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HLL AACAE + G + ++PL + + VL G+E LVCID+I IAG WE A+ Sbjct: 59 HLLQAACAEAALNGLSASFIPLREMVTYGCGVLQGLEQQQLVCIDDIHVIAGQAGWEEAV 118 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR E TRLL++ P L DL SRL WG + +L L ++K Q LQ R Sbjct: 119 FDLINRCREQ-DTRLLMSSSIPASSHAFELGDLRSRLAWGPVLQLHELQQDEKWQWLQAR 177 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A RGF + E+ G++L R M L L++LDR ++ QRK+T+P +K+ L Sbjct: 178 AEYRGFFISEESGQYLFAHYPRSMAFLNYALEELDRITLQTQRKVTVPLLKQELN 232 >UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUK9_THISH Length = 233 Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + LPD F +F G N L +L+ + R E +YL+ G+G++HLL AAC Sbjct: 5 QLTLDVTLPDGSDFDAFHAGANGLALDSLRALARGEGERQLYLYGEPGSGKTHLLQAACH 64 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E S G Y+P L+G++ L LVC+D I + G E +F+L N Sbjct: 65 EASLWGRRAAYLPAFLLRQGGAHALEGLDQLDLVCLDGISALVGCVETETGLFNLIN-AS 123 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 TRL++ PR L+ LPDL SRL WG +++LQPL D K L RAR RGF+L Sbjct: 124 RCRDTRLVLADTHAPRALSAALPDLGSRLVWGPVFQLQPLDDAGKRAVLVERARRRGFDL 183 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 P +VG FLL+ R++ TL + L++L++AS+ QR++T+PF + +L Sbjct: 184 PGEVGEFLLRTCARDLATLMVQLERLEQASLRDQRRVTLPFARAVL 229 >UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFF9_9GAMM Length = 235 Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 1/228 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + +D F + PG N+ + L+ L IYLW +G G SHLL A+ Sbjct: 9 QLPLHVSFAEDAVFEDYLPGQNAIAIGTLRQSLANLTDHLIYLWGAKGVGVSHLLQASIH 68 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 +L +G Y+PL + + PE L+G++ L V +D+I+ IA D W+ A+F YNR+ Sbjct: 69 DLQVQGFDAVYLPLSECLEYGPEALEGLDQLHAVALDDIDLIAADAHWQEAVFHFYNRMR 128 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 +SG+ L++ P QL L L DL SRL G L P++DE+++ + + R RG + Sbjct: 129 DSGR-HLMVGARCSPLQLPLTLADLKSRLSSGLTISLLPMTDEERVTWVIWKGRRRGLVI 187 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 DV FL+ R ++ M+ L T D+LD AS+ +RK+TIPF+K++L L Sbjct: 188 GRDVAEFLITRHNQNMKELVTTFDRLDSASLAEKRKITIPFLKQVLGL 235 >UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEB2_CHRVI Length = 237 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 3/232 (1%) Query: 1 MNTPA-QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN P QL LPL L + T S+ PG N+ +L A+ + R Y+ L+ G G++HL Sbjct: 1 MNGPTPQLHLPLELRPEPTLESYRPGPNAEVLDAVSALARGAGEPYLLLFGASGTGKTHL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L A+C + + G +VPL P +L+ +E + LV ID+I+CI GD WE A+FD Sbjct: 61 LQASCQTVVRSGRQAHFVPLGMAD-LDPAMLENLEQMDLVAIDDIQCIVGDPAWERALFD 119 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L+NR+ E G++ LL D P L LPDLASRL WG Y+L PL D D Q L AR Sbjct: 120 LFNRLREQGRS-LLGATDAAPDSLPFSLPDLASRLLWGPRYRLLPLPDLDCEQLLLESAR 178 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L ++ RF++ R+ +L L +LD S+ QR+ +IP V+ I+ Sbjct: 179 GRGMRLTPELVRFIMSHHARDPASLLDLLARLDSLSLREQRQPSIPLVRRIM 230 >UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUX7_HALHL Length = 241 Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 22 FWPGDNSSLLAALQNVLRQE-HSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLD 80 F PG+N + L + ++ + +YL G G+SHLL AC ++ G Y+PLD Sbjct: 18 FVPGENDTALRLVTDLADGLLEAPALYLHGPHGVGKSHLLQGACRRVTTAGGVAVYLPLD 77 Query: 81 KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPP 140 + VLDG E L+ +D+++ + G + W+ A+F LYNR++E G RLL G +PP Sbjct: 78 QLLGHGAAVLDGWEQAQLIALDDLDALDGRDEWQGAVFHLYNRVVERGG-RLLFAGRQPP 136 Query: 141 RQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDRE 200 +L L LPDL SRL WG + ++ + L L+ RA RG ELP+ R+L++RL RE Sbjct: 137 AELPLDLPDLRSRLGWGPVVAVREPDETTCLAILRQRAAQRGLELPDATARYLIRRLPRE 196 Query: 201 MRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + L + LDRAS+ A R+LT+PFV+EIL Sbjct: 197 LPGLLAFFETLDRASLAAGRRLTVPFVREIL 227 >UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N9A5_9GAMM Length = 234 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 4/201 (1%) Query: 33 ALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQR-GDAVGYVPLDKRTWFV-PEVL 90 AL++ R ++ ++YL+ G G++HLL ACAE Q+ G V Y+ L + P VL Sbjct: 33 ALESFCRLDNLDFLYLYGETGTGKTHLL-IACAEKVQKLGFRVIYLSLAELIQTSEPAVL 91 Query: 91 DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 +E L+C+D++E +AG++ WE+A+F +NR L K LL++ + P + LPDL Sbjct: 92 QSLEQADLLCLDDLEAVAGNKEWEVALFHCFNR-LHDAKGSLLVSAEHNPANSQIQLPDL 150 Query: 151 ASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ 210 SRL G +Y+L +SDE K QAL L+++ RG + +DV ++LL+ R+M L L Q Sbjct: 151 CSRLATGLVYQLTTMSDEQKQQALILQSQKRGLTMNDDVAQYLLRHYGRDMPALMSVLQQ 210 Query: 211 LDRASITAQRKLTIPFVKEIL 231 LD+AS+ A+RKLTIPF++++L Sbjct: 211 LDKASLQAKRKLTIPFIRQVL 231 >UniRef50_B4X369 Chromosomal replication initiator protein DnaA n=2 Tax=Alcanivorax RepID=B4X369_9GAMM Length = 229 Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 90/231 (38%), Positives = 124/231 (53%), Gaps = 10/231 (4%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLA----ALQNVLRQEHSGYIYLWAREGAGRSHLL 60 AQL L L L + +F G N + +A A++ V RQ + WA +G G+SHLL Sbjct: 3 AQLPLALQLREGNALDNFHAGPNGAAVAGLHEAVEGVDRQA-----FFWAGDGQGKSHLL 57 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A G +P + VP+VL+ ME L+ ID+ + AG WE A+F L Sbjct: 58 EGAVRLAQHNGLDACLLPASEIIPLVPDVLESMEQFGLLAIDDCQLFAGLPAWEEALFHL 117 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR++ G RLL+T + P + L LPDLA+RL G +Y+L L DED LQ RAR Sbjct: 118 YNRLMSLGG-RLLVTANASPGAMGLMLPDLATRLAAGPVYRLMSLEDEDLQALLQERARA 176 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L +V +++ R +R L L LDR ++ QR +TIPFVK+ L Sbjct: 177 RGLRLEPEVAHYIVLRSERSAGALMELLSDLDRLALAQQRSVTIPFVKDAL 227 >UniRef50_B9ZM52 DnaA regulatory inactivator Hda n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM52_9GAMM Length = 243 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 6/235 (2%) Query: 2 NTPAQLSLPL--YLPDDETFASFWPGDNSSLLAALQ--NVLRQEHSGYIYLWAREGAGRS 57 N+P + LPL L D F+ F+ N+ A+Q +V I L G+G++ Sbjct: 6 NSPLERQLPLDLRLRDASRFSGFYARGNALARDAVQALSVGTGIQEPQILLHGPSGSGKT 65 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMA 116 HLL AAC + +RGD V Y+PL + P VLDG+E LV +D++E + G W+ A Sbjct: 66 HLLQAACYQGHERGDPVSYLPLGEVAEAPPMAVLDGLERSCLVALDDLEAVVGRGDWDEA 125 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 +F L NR+ ++G R+L+ PP L + LPDLASRL WG ++++Q D + L Sbjct: 126 LFGLVNRLRDAG-CRVLLAAAAPPEGLPVRLPDLASRLAWGPVFRMQRPDDVACKEILAQ 184 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RA LRG ELPE V +LL+R R++ TL LD+LD A++ QR+LTIPFV+E L Sbjct: 185 RAALRGLELPEPVADYLLRRCSRDLSTLLALLDRLDLAALAQQRRLTIPFVREQL 239 >UniRef50_B4RZX5 Chromosomal replication initiator, DnaA like protein to DnaA protein Hda n=2 Tax=Alteromonas macleodii RepID=B4RZX5_ALTMD Length = 245 Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 15/243 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNV---------------LRQEHSGYIYLWA 50 QL LP+ LP DE F SF N +++ L+ + L + L Sbjct: 2 QLPLPITLPVDENFDSFVNKGNEEVVSILRQIAEALPYWREAPALGPLSSLQLPLVTLLG 61 Query: 51 REGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGD 110 G+SHLL A C +L+ + + Y+ L+ + ++ +G+E+LSL+ +DNI IAG+ Sbjct: 62 NSAIGKSHLLFATCHQLAGKSVSHLYLNLNDYQAWSLDIFEGLENLSLIALDNIHAIAGN 121 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 WE A+FDL+NR++E+ + ++ T P LPDL SRL WG IY + L D + Sbjct: 122 VQWEEALFDLFNRVIETKRALIICTSHLGPSNPAFTLPDLRSRLAWGVIYHVNQLDDGGR 181 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 +A++LRA RG L +FLL +R++++L L +LD S+ Q++L++ VK Sbjct: 182 EEAVRLRAEERGLTLSNQALQFLLHHSERDLKSLMSLLARLDARSLQEQKRLSVAMVKRE 241 Query: 231 LKL 233 L L Sbjct: 242 LNL 244 >UniRef50_Q1YP64 DnaA family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP64_9GAMM Length = 234 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 132/238 (55%), Gaps = 9/238 (3%) Query: 1 MNTPAQLSLPLYLPDDETFASFW-PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN QLSL + L + TF +F+ P LA + +L+ E Y Y+ G G SHL Sbjct: 1 MNEFQQLSLAIKLDNQATFDNFYAPTGTPQHLAKM--LLQDEGKQYAYVCGSSGTGLSHL 58 Query: 60 LHAACAELS---QRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + A C + S G AV Y+PL + + +VL+G+E LVC+D+++ +AG E W+ Sbjct: 59 MQAVCQQHSTGLNNGAAV-YLPLKELCDYPAGQVLEGLESSDLVCLDDLDQVAGREEWQA 117 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +F+ +NR ESG TRLLIT P L + L DL SRL G +L D D + LQ Sbjct: 118 PLFNFFNRCSESG-TRLLITAHTLPDYLEVLLDDLLSRLKSGISLQLMDYKDADLRRLLQ 176 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RA G L ++V RFLL RL R L L++LD S+ QR+LT+PFVK +L + Sbjct: 177 HRASGLGLYLSDEVARFLLHRLPRNSHLLMDALEKLDAVSLREQRRLTLPFVKTVLGI 234 >UniRef50_Q2Y5R8 Regulatory inactivation of DnaA Hda protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5R8_NITMU Length = 224 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 18 TFASFWPGDNSSLLAALQNVLR-QEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGY 76 T ++F G N+ LL L N+L ++H ++Y+W G G+SHLL + + Y Sbjct: 14 TLSNFVTGRNAELLQTLDNLLMMRKHERFVYIWGGTGCGKSHLLQGVASACKRNDMNTLY 73 Query: 77 VPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITG 136 +RT F +G E V +D+++ + D ++ +F LYNRI + G+ LL++G Sbjct: 74 FACGERTSFA----NGSE-ADCVMVDDVDRLGADA--QIGLFHLYNRIRDEGQAFLLVSG 126 Query: 137 DRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKR 196 P QL L DL +RL WG +Y++ L+DE+K++A++ A RG LP++V +LL+ Sbjct: 127 SVAPTQLKL-RADLLTRLAWGLVYEVHELTDEEKMEAMKSHASSRGLALPQEVCDYLLRH 185 Query: 197 LDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 R++ +L L+ LD+ S+ + RK+T+P V+E+L+ Sbjct: 186 ERRDLTSLMAKLNALDKYSLASHRKITVPLVRELLQ 221 >UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKT0_HAHCH Length = 232 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 123/228 (53%), Gaps = 3/228 (1%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 Q++L L + T +F+ + ++ ++Q + G++HLL AAC Sbjct: 7 TQMALRLSNGESATLENFFEPPSGVVVQSIQRFFTASEDTVFSICGASAQGKTHLLMAAC 66 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 R + Y+ L + F VL G+E ++C D+I+ IAG WE A+F L+NR Sbjct: 67 NGF--RSEKCFYLSLREYADFGVHVLAGLESFDVLCFDDIDAIAGQPEWEEALFHLFNRC 124 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E G + LIT P Q LPDL +RL WG+ +L L + ++ L ++A GF Sbjct: 125 RERG-CKWLITSAEAPSQTPFLLPDLKTRLAWGECVRLPELDEVQRINVLDIKAANIGFR 183 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L ++V +++++R R++ +L + L++LD+AS+ +R +T+PFVK ++ Sbjct: 184 LSDEVKQYIMRRAPRDLSSLSLILERLDKASLVEKRPITVPFVKSVMN 231 >UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYQ5_HALNC Length = 233 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 10/236 (4%) Query: 1 MNTPA---QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 MNT Q+ L L L + F +N L A + + +++ + G++ Sbjct: 1 MNTSGKMQQIPLDLALNAPHSLDGFIGVENLLLRALITQLALGRGEAQLFIHGAQNCGKT 60 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME--HLSLVCIDNIECIAGDELWEM 115 HL AAC Q+G + Y+ + K P LD M H+ L+ +D+++ +AGD+ E Sbjct: 61 HLAQAACFYAGQQGRSAAYIDVKKN----PSQLDHMNLSHIDLLVLDDVDALAGDDQGEF 116 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +FDL NR+ E + LL+T PP LPDL SRL WG + ++ +K++ L+ Sbjct: 117 LLFDLINRLREQ-EIPLLMTASLPPAACGFQLPDLLSRLGWGITMLIHAPNEAEKIELLR 175 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A+ RGF+LP + +LL+R R++ +L + LD AS++AQRKLTIPFV+ +L Sbjct: 176 RKAQERGFDLPFESAVYLLQRSPRDLGSLLKIIQDLDHASLSAQRKLTIPFVRSVL 231 >UniRef50_A4GJ90 Putative DNA replication factor n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJ90_9BACT Length = 234 Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 1/234 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPG-DNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN P QL P + +F SF+ DN L++ L ++ E++ + + EG+G+S L Sbjct: 1 MNNPTQLIFPFQVNQKASFDSFFCSPDNIELMSRLTDLASSENTDELIINGAEGSGKSFL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + A C ELS G ++P++K E+ + L VCID+++ I E WE A+F+ Sbjct: 61 MQAICNELSSSGKQFAFIPMNKAINMGVEIFQNLASLDAVCIDDLQLILSKEEWETALFN 120 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L N+ +S + +L G + + LPDL SR+ + KLQ + DE QAL ++ Sbjct: 121 LINQCQQSYCSLILSFGGNQSLEDSTQLPDLLSRIKRMEFMKLQAVLDESLNQALGFVSQ 180 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 + + FLL RE L L LD+ + + +RK+TIP +KE L + Sbjct: 181 QLDINIEKAEIEFLLNHQTREFSILVDNLISLDKQAASLKRKITIPLIKETLNI 234 >UniRef50_A4ACL3 DnaA-like protein hda n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACL3_9GAMM Length = 234 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + L D+ TF +F P SL A L ++ R +L G G+SHLL A C Sbjct: 13 QLALKIGLRDEATFENFCP--RPSLAAVLDSMTRPAAEPLQFLHGAAGEGKSHLLQALCH 70 Query: 66 ELSQRGDAVGYVPLDK-RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + Y+PL + R +L+ +E +L+ +DN+E IAGD WE A+F L NR Sbjct: 71 ATA----GALYLPLAELRGAHPGALLENLETAALLALDNLEHIAGDGEWEEALFHLMNRA 126 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 + + L + P L + LPDL SRL G + + P +DE+ + LQ RA RG Sbjct: 127 -RAAQCPLWVAARSPAMDLGIELPDLRSRLGGGVTWAMTPANDEEMRRILQFRAERRGLA 185 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P+ V +L R R + L TL++LD AS+ QR LT+P V+E++ Sbjct: 186 MPDAVASYLCARETRALGDLMDTLNRLDNASLQRQRPLTVPLVREVM 232 >UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBI1_9PROT Length = 225 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 12/225 (5%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLR-QEHSGYIYLWAREGAGRSHLLHAACAELS 68 PL LP T +F PG N+ L+ L+++L +E +IYLW G G+SHLL A + Sbjct: 10 PLPLP---TLENFLPGRNAELIYMLRSILSGKEKECFIYLWGNPGCGKSHLLRAIVTAYA 66 Query: 69 QRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESG 128 ++ Y + F + ID+I + E+ F LYNR+ E G Sbjct: 67 RKNAKSVYHCAENHYPFRSD-----SAADCFAIDDIHGLGAAGQAEL--FSLYNRLREDG 119 Query: 129 KTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPED 188 LL++G P L++ DL +RL WG +Y++ L++E+K QA+Q A GF LP++ Sbjct: 120 HALLLVSGSTAPAYLDMR-QDLVTRLGWGLVYQVHELTEEEKTQAMQTHAADCGFTLPQE 178 Query: 189 VGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 + +LL+ R++ +L MTLD L+R S+ QR +TIP ++E+L++ Sbjct: 179 ICVYLLRHGRRDLPSLMMTLDALNRYSLVHQRPITIPLLRELLQV 223 >UniRef50_B8KQC7 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KQC7_9GAMM Length = 237 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 11/233 (4%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH-SGYIYLWAREGAGRSHL 59 +T QL L + L + TF +F D +S LA + L+ H S YL+ G+G+SHL Sbjct: 6 FSTAGQLPLAIALDAEATFDNF-AADTTSELAV--DWLKDNHESAGGYLFGGAGSGKSHL 62 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L A+CA + Y+PL + + +VLDG++ LSLV +D+I+ IAGD WE A+F Sbjct: 63 LQASCAATTA---PALYIPLAEFADYPAAQVLDGIDALSLVALDDIDRIAGDSSWEEALF 119 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ-ALQLR 177 +N + SG TRLL++ Q++ L DL SRL ++L P D+D L+ L LR Sbjct: 120 HAFNLCVGSG-TRLLVSASSTASQIDFTLADLQSRLGSLAAFRL-PRPDDDSLERMLDLR 177 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 A RG L +V R+++ R R+ + L++LD A++ R +TIP +KE+ Sbjct: 178 AGHRGITLSAEVKRYIVTRAPRDSHAVMALLEKLDTAALARHRLVTIPLIKEL 230 >UniRef50_A1TZ76 Regulatory inactivation of DnaA Hda protein n=3 Tax=Marinobacter RepID=A1TZ76_MARAV Length = 232 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 4/229 (1%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG--YIYLWAREGAGRSHLLHA 62 +Q+ L + L DD F +F N S L+ V R E SG + + G+SHLL A Sbjct: 4 SQMVLGVKLRDDARFDNFHGDRNRSAAQWLELVCR-EPSGLPVVVICGDSDTGKSHLLQA 62 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 C E Q G + + + F P+ L G++ ++C+D++E A D WE A+F LYN Sbjct: 63 ICHESEQMGKTAVCISIVELLPFGPDALAGLDSHDVICLDDLEHAAADPGWEEAVFHLYN 122 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R+L+ L+++ P L GL DL SRL G + +L DED+ + L RA RG Sbjct: 123 RVLDRNGL-LVVSLSEVPASLPFGLADLGSRLAHGLLIQLGVYRDEDRQRILMARAEQRG 181 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + EDV F+++R R++ L LD LD S+ AQR+LTIPFVK ++ Sbjct: 182 LVMSEDVAGFIMRRAPRKLGDLLGLLDTLDENSLQAQRRLTIPFVKAVM 230 >UniRef50_Q0ADW8 Regulatory inactivation of DnaA Hda protein n=2 Tax=Nitrosomonas RepID=Q0ADW8_NITEC Length = 221 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 9/215 (4%) Query: 18 TFASFWPGDNSSLLAALQN-VLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGY 76 + +F P N LL L+N V + YLW G+G+SHLL A ++ Y Sbjct: 15 SLDNFIPEGNEELLYTLRNLVADNRQDRFYYLWGNTGSGKSHLLQAVTNIFMEQQRNTHY 74 Query: 77 VPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITG 136 + ++ + +D + +DNIE + D+ ++ +F+LYN+I ES L G Sbjct: 75 IDCNQ-----ADEIDFNLTADCIAVDNIEQL--DDAEQIRLFNLYNQIRESKYGIFLAGG 127 Query: 137 DRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKR 196 RPP QL L PDL +RL WG +Y++ L+DE K++ +Q A GFELP DV +LLK Sbjct: 128 TRPPAQLGLR-PDLTTRLGWGLVYQVHELTDEKKIEVMQDYAIRCGFELPLDVCNYLLKH 186 Query: 197 LDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R++ +L + LD+ S+T QR +T+P ++E+L Sbjct: 187 EQRDLSSLIRQVSALDQLSLTRQRPVTLPLLRELL 221 >UniRef50_UPI0000E11700 DNA replication initiation factor n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E11700 Length = 246 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 25/249 (10%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQ--NVLRQEHSGYIYLWAREGAGRSHLLHAA 63 QL LPL LP +T SF DN L AL N L + + + + +G++HL AA Sbjct: 2 QLPLPLALPSKQTLDSFIFEDNLLLKDALLQINTLSSK-NALLMVHGAHHSGKTHLATAA 60 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLD-------------------GMEHLSLVCIDNI 104 + + Y LD F PE+L G E +L+ +DN+ Sbjct: 61 YQHAISQSISAYY--LDLSLLFAPEILTAYQASSDIHSETLMSDMLAGYEAHALLVVDNM 118 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 +AG++ E+A+FDL NR +ES +++T P + LPDL SRL WGQ+Y + P Sbjct: 119 HVVAGNKDLEIALFDLINRCIESA-CAMVLTSALGPAHHDFCLPDLRSRLTWGQVYHIHP 177 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 L+D+ LQA+ + +G + + +LLK R+ ++ +D+LD+ S++ Q+ +TI Sbjct: 178 LTDDGLLQAVTSYVQTKGLNMQMNAISYLLKFSTRDFSSIQRVIDELDKVSLSHQQAITI 237 Query: 225 PFVKEILKL 233 P +K++L + Sbjct: 238 PLIKKVLHI 246 >UniRef50_Q31GT0 Regulatory inactivation of DnaA Hda protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GT0_THICR Length = 237 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 129/232 (55%), Gaps = 6/232 (2%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAA---LQNVLRQEHSGYIYLWAREGAGRSHLLH 61 QL L + L ++ F +F + +LA Q +L+ + Y G+G++H+L Sbjct: 3 VQLPLKIGLREEVCFDTFIAEEEGVVLALNRFQQTLLKSNNGDAFYFQGESGSGKTHILQ 62 Query: 62 AACAELSQRGDAVGYVPL-DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC ++++ + Y+PL D +P+VL+G+E LVC+D++E I G WE A+ L Sbjct: 63 AACRFMTEKKSSSVYLPLGDDSLPLIPDVLNGLEQTLLVCLDDVENIIGQPEWEHALASL 122 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE-DKLQALQLRAR 179 R E G +++++G P ++ +L + L+PL+++ D + A+Q A Sbjct: 123 LMRSKELGH-KVVLSGTNPAGSWSIATTELTHAMMSVLPITLKPLTNKPDIVLAMQRHAL 181 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 GFELP DVG +L+K+ +++ L L L++A+ +R++T+PFVK+IL Sbjct: 182 KLGFELPLDVGNYLIKQFSTDLQELLSVLRILEQATFVEKRRMTLPFVKQIL 233 >UniRef50_B8KF04 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF04_9GAMM Length = 235 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 10/232 (4%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI-YLWAREGAGRSHLL 60 N QL L + L D+ TF +F + LA L + + + H + +L G G+SHLL Sbjct: 10 NQSPQLPLQIGLQDETTFDNFLAREA---LAPLLDSMSRPHCEPLQFLHGAAGEGKSHLL 66 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 A C D Y+PL P ++ +E SL+ +D+++ IAG WE A+F Sbjct: 67 QALC----HATDGAVYLPLAVLLESPPSDLFQDLESSSLLALDDLDVIAGRREWEEALFH 122 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L NR + + L + RP L L L DL+SRL G + L D DK LQ RAR Sbjct: 123 LINRA-RAAQCPLWMAARRPANDLGLQLADLSSRLAGGVTWALSAADDSDKQAILQFRAR 181 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +G L E V ++ R R + L TLD+LDRAS+ QR LT+P ++E++ Sbjct: 182 RKGLVLSESVAHYVCSRESRALADLMETLDRLDRASLQLQRPLTVPLIREVM 233 >UniRef50_C6WT64 DnaA regulatory inactivator Hda n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT64_METML Length = 218 Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 120/213 (56%), Gaps = 29/213 (13%) Query: 21 SFWPGDNSSLLAALQNVLRQ-EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL 79 +F G N+ L +L+ L E + +IYLW +G+G+SHLL A C ++++ + ++ Sbjct: 29 NFIEGQNAEALFSLKQALTHAEEARFIYLWGAQGSGKSHLLQA-CERMARQSNLPLFIAD 87 Query: 80 DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRP 139 D T DE ++A+FD +N++ SG L+ +G Sbjct: 88 DTHTL-------------------------DEAAQIALFDQFNQLRSSGGI-LISSGIAA 121 Query: 140 PRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDR 199 P Q+NL DLA+RL WG +Y+L PL+DE+K QAL+ A RG +LP++V + L+ L R Sbjct: 122 PMQMNLR-DDLATRLAWGLVYQLHPLTDEEKAQALRTHATERGMKLPDEVVEYCLRYLRR 180 Query: 200 EMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ TL LD LD S+T ++ +T+P +K++L+ Sbjct: 181 DLPTLMAVLDALDVWSLTEKKPVTVPMLKKLLQ 213 >UniRef50_A9LYZ8 DnaA-related protein n=28 Tax=Neisseriaceae RepID=A9LYZ8_NEIM0 Length = 243 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 12/230 (5%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 T QL D +F F +N+ L+ VLR +H +IY+W EGAG+SHLL A Sbjct: 21 TVNQLIFDFAAHDYPSFDKFLGTENAELVY----VLRHKHGQFIYVWGEEGAGKSHLLQA 76 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 A+ + G Y+ D + + + E+L+ +D +E + +E + +F ++N Sbjct: 77 WVAQALEAGKNAAYI--DAASMPLTDAAFEAEYLA---VDQVEKLGNEE--QALLFSIFN 129 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R SGK LL+ + P+QL + DL +R+ + +Y+++PL+D++K+ AL A R Sbjct: 130 RFRNSGKGFLLLGSEYTPQQLVIR-EDLRTRMAYCLVYEVKPLTDQEKIDALASMAAARQ 188 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++ +LLK R+M +L M LD LD ++T +++T+P ++++LK Sbjct: 189 VTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLK 238 >UniRef50_C5V5E1 DnaA regulatory inactivator Hda n=2 Tax=Betaproteobacteria RepID=C5V5E1_9PROT Length = 222 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 26/222 (11%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSG-YIYLWAREGAGRSHLLHAACAELSQRGD---- 72 TF +F G N+ LL+ L L E + +Y+W +G+G+SHLL A C ++Q Sbjct: 15 TFDNFVAGGNAELLSVLHQALSGESTDRCVYVWGADGSGKSHLLQA-CVGVAQNAHLNAI 73 Query: 73 -AVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTR 131 A GYVP E +V +D+ + + DE ++ +F+LYN + +SG Sbjct: 74 YAQGYVP---------------EPAEVVAVDDADTL--DEAGQIELFNLYNWMRDSGGM- 115 Query: 132 LLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGR 191 LL++G P LN+ DL +RL WG +Y++Q LSDE+K AL A+ RGF L +V + Sbjct: 116 LLVSGLSSPLHLNV-RADLRTRLGWGLVYQVQGLSDEEKALALVGHAQGRGFALAPEVVQ 174 Query: 192 FLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 +LL+ R++ +L LD LD S+ R +IP +KE+++ Sbjct: 175 YLLRHGRRDLPSLLTVLDALDEHSLRLHRAPSIPLLKEVMQF 216 >UniRef50_C1DC86 DnaA-related protein n=3 Tax=Neisseriaceae RepID=C1DC86_LARHH Length = 223 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 12/227 (5%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L L P F F N ++AAL + + +IYLW G G++HLL Sbjct: 3 QLVLDLTPPPAPAFDHFIAEHNRQIIAALTDA---QGERFIYLWGAAGVGKTHLLQQWVE 59 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 + G A Y LD R +P D V +D+++ + D+ ++ +F ++N + Sbjct: 60 HANAVGRAAIY--LDARAEKLP---DFAREARCVAVDHVDELEPDD--QITLFSIFNSLR 112 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 +S +LL G PP++L L DL +RL WG ++++Q +SD DKL AL+ A++R + Sbjct: 113 DS-DGQLLTAGREPPQRLKLR-DDLRTRLGWGLVFQVQAMSDADKLAALRRHAQMRLVNV 170 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 PEDV R+L+ R+M +L +D LD S+ Q+ +T+P VK IL+ Sbjct: 171 PEDVLRWLITHWRRDMASLVSMVDALDHYSLALQKPITVPLVKHILQ 217 >UniRef50_Q3BQY1 Replication related protein n=20 Tax=Xanthomonadaceae RepID=Q3BQY1_XANC5 Length = 235 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 M+ P QL L L P D+ F S+ + L S ++YL G G++HL Sbjct: 1 MSVP-QLPLALRAPPDQRFDSYIAAPDGLLAQLQALAA-GHVSDWLYLSGPAGTGKTHLA 58 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + CA Q G Y+PL + + L+ +E LV +D +E IAG E+A+FD Sbjct: 59 LSLCAAAEQAGRTPAYLPLQAAAGRLRDALEALEGRGLVALDGVESIAGRRDDEVALFDF 118 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR +G T LL T + P L L LPDL SRL L L D + L+ RA+ Sbjct: 119 HNRARAAGIT-LLYTARQMPDGLALVLPDLRSRLSQCIRIGLPVLDDAARGAVLRDRAQR 177 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L E +LL +RE+ L LD+LDR S+ A+R++T+PF++ ++ Sbjct: 178 RGLALDEAAIDWLLTHSERELAGLVALLDRLDRESLAAKRRITVPFLRRVV 228 >UniRef50_C6P7A5 DnaA regulatory inactivator Hda n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P7A5_9PROT Length = 217 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 27/228 (11%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLR-QEHSGYIYLWAREGAGRSHLLHAACAELS 68 P ++P T +F G N LL+AL++ L + +Y+W G G+SHLL A+ Sbjct: 7 PEWIP---TLENFVVGRNVELLSALRHALAGTQGERMLYVWGDAGGGKSHLLQASAGLAL 63 Query: 69 QRGDAV----GYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 G + G VP E +V +D++E + D+ ++A+F LYNR Sbjct: 64 ASGQSAICTCGAVP---------------EAAQVVAVDDVEKL--DDEAQVALFALYNRQ 106 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E+G LL+ G + P L+L DL +RL WG +Y++ L+D +K QAL+ A RGFE Sbjct: 107 RENGGM-LLVGGRQAPAFLSL-REDLRTRLGWGLVYQVHALNDTEKAQALEQHAMARGFE 164 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +V +LL+ R++ L TLD LD + +R ++P +KE+++ Sbjct: 165 LTTEVTTYLLRHGRRDLPALLATLDALDELCLRLKRAASVPLLKEVMR 212 >UniRef50_C4KUE4 DnaA regulatory inactivator Hda n=66 Tax=Betaproteobacteria RepID=C4KUE4_BURPS Length = 341 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 20/234 (8%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI-----YLWAREGAGRSHLL 60 QL+L L P TF +F+ G N+ L+ L+ + +G + Y+W G+GRSHLL Sbjct: 106 QLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSGRSHLL 165 Query: 61 HAACAELSQRGDAVGYVP---LDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 A + + G A P LD F P V SL +D+ C A ++ ++A+ Sbjct: 166 QALVHDTTY-GHARYVSPQGGLDALA-FDPRV-------SLYAVDD--CDALNDAQQIAL 214 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F+L+N + T L++ G P L++ DL +RL WG ++ L PL+DE K L+ Sbjct: 215 FNLFNEVRAHPMTALVVAGPAAPLALDV-REDLRTRLGWGLVFHLAPLTDEGKAAVLKHA 273 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A+ RG L +DV +LL R+M +L LD LDR S+ +R +T+P ++ +L Sbjct: 274 AKERGIALADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAML 327 >UniRef50_UPI0000E87A7A hypothetical protein MB2181_00330 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87A7A Length = 197 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 119/227 (52%), Gaps = 34/227 (14%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L ++ +T +F G N+ L +++ +++ +IY+W G+G+SHL A Sbjct: 3 QLLLNIHPVPKKTMGNFIVGKNAECLNSIERLIKSTDHFFIYIWGESGSGKSHLASA--- 59 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 + ++ ++++E D+ ++ +F+L+N+ Sbjct: 60 ---------------------------LREKNVKVVEDVENFDNDQ--QIELFNLFNKS- 89 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 + + +L+ITG+ P ++NL PDLASRL W +Y+++PL+DE+K AL+ A +G Sbjct: 90 KKLRNKLVITGNDAPNKMNLR-PDLASRLSWELVYQIKPLTDEEKKVALEYYAMQKGMSF 148 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + + L R++ +L TLD LD S+ A+R +TIP + ++LK Sbjct: 149 DRKIISYCMANLKRDLPSLISTLDALDEWSLKAKRPITIPLLIQLLK 195 >UniRef50_A1AVU3 Regulatory inactivation of DnaA Hda protein n=3 Tax=Gammaproteobacteria RepID=A1AVU3_RUTMC Length = 224 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 119/226 (52%), Gaps = 6/226 (2%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL LPL L ++F N +L + +L Q+ S +++ + +G++HLL CA Sbjct: 3 QLGLPLSLNSKMLLSNFIGKKNQQVLDFVNQLLTQKSSAVVFISGAKSSGKTHLLQG-CA 61 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 S +G + +D + +++ + + +CIDN++ ++ + + A+FDLYNRI Sbjct: 62 -FSALDGQLGVIYIDIKQELPEGIINDLVSVDWICIDNVDYLS--IIQQQALFDLYNRI- 117 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 + T+L+++ P +LNL L DL +RL ++ L+ L+DE K+ ++ + + Sbjct: 118 KLADTKLIVSAGSLPGELNL-LKDLKTRLSLAVVFTLETLNDEQKILIIERKMTDININI 176 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 V +L K R++ + ++ LD S+ + ++IPFVK+ L Sbjct: 177 DIKVYHYLFKVFSRDLNDVLNAINILDETSLQKKNNISIPFVKQTL 222 >UniRef50_A4SZR2 Regulatory inactivation of DnaA Hda protein n=2 Tax=Polynucleobacter necessarius RepID=A4SZR2_POLSQ Length = 251 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 45 YIYLWAREGAGRSHLLHAACAELSQRG-DAVGYVPLDKRTWFVPE----VLDGMEHLSLV 99 +IY W EG+GR+HLL A G + P + W E L E S++ Sbjct: 60 WIYWWGPEGSGRTHLLDAIDNAAQNAGIECFSLSPSEPTAWVRLEEKMSALAQAESPSVI 119 Query: 100 CIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI 159 +D+++ + DE A+F + N + S + + G P L L DL +RL WG + Sbjct: 120 TVDDVDRL--DERLVGALFRILNGVQASKNIHIFMAGKAAPANLELR-EDLRTRLGWGLV 176 Query: 160 YKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 ++ Q L D +K+QAL+ A+ RG L DV +LL R R+M L +D LD S+ + Sbjct: 177 FQTQLLDDSEKIQALEQAAKARGLVLSPDVLPWLLNRFYRDMPNLMALIDALDAYSLETK 236 Query: 220 RKLTIPFVKEILK 232 R +T+P V+E+L+ Sbjct: 237 RAVTLPLVRELLQ 249 >UniRef50_A6T215 Uncharacterized conserved protein n=6 Tax=Betaproteobacteria RepID=A6T215_JANMA Length = 223 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 21/231 (9%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHA 62 L LP P +T SF G N+ L LQ + + +G ++YLW GAG++HLL A Sbjct: 6 LDLPAEKP--QTLDSFVVGTNAELAQLLQRLAAGQPNGLDERFVYLWGEAGAGKTHLLRA 63 Query: 63 ACAELSQRGDAVGYVPLDKRTW-FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 R Y+ D T F+ + +L +D+ + D ++A F L+ Sbjct: 64 MAETPHAR-----YLDSDAGTDDFLYD-----SATTLYLLDDSHKLTPDA--QIAAFALF 111 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N++ E G LL G+ P L + DL +R WG IY++ LSD++K+ AL A R Sbjct: 112 NQVREQGGC-LLAAGNAAPASLTV-REDLRTRFGWGLIYQVHGLSDDEKIAALTHAAGAR 169 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G L V +L+ R+MR+L LD LD+ S+ +R +T+P ++E+L+ Sbjct: 170 GLTLSPGVLPYLITHFARDMRSLSAMLDALDQYSLETKRPITLPLLRELLQ 220 >UniRef50_Q47B71 Regulatory inactivation of DnaA Hda protein n=2 Tax=Betaproteobacteria RepID=Q47B71_DECAR Length = 230 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 19/229 (8%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY-LWAREGAGRSHLLHAAC 64 QL L L T +F G N+ LA L L + + LW G+GRSHLL A+ Sbjct: 16 QLILDLLPESPPTLDNFVAGGNAETLALLTEWLAGTRTDTSFCLWGEAGSGRSHLLQAS- 74 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 G+ +D + E L+ +D++E + DE ++A+F+ +NR Sbjct: 75 ----------GFTYVDAALDPALKTAPAAEQLA---VDHVEAL--DETGQIALFNHFNR- 118 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 L+ LL D+PP L L DL +RL G I +LQPLSD +K AL +A+ R + Sbjct: 119 LKMASGMLLTAADQPPAHLALR-EDLRTRLGSGLICRLQPLSDAEKAAALGAQAKERALK 177 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 L ++ +L++ R+MRTL + LD ++ +R +T+P ++E+L + Sbjct: 178 LTPELIDYLMRHAPRDMRTLSTIIVALDEYTLEQKRPVTLPLLRELLNM 226 >UniRef50_A6GSM4 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSM4_9BURK Length = 250 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 120/229 (52%), Gaps = 17/229 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE-HSGYIYLWAREGAGRSHLLHAAC 64 QL L ++ P T ++F G N L+ L+ ++ + S ++Y++ G G+SHLL Sbjct: 22 QLLLDVFTPPRPTLSNFLIGQNGQLVHELRELINMKGTSPFVYIYGPSGCGKSHLLRGVA 81 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 ++L V + R F P + IDNI+ + ++ +F+ +N Sbjct: 82 SQL-----GVNVLEGGNRFVFRPTE-------QALVIDNIDRLT--PYSQVQLFNAFNSS 127 Query: 125 LESGKT-RLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + K ++++ G+ P +L L DL +R++ G ++QPLSD++K +ALQ A+ RG Sbjct: 128 MAENKPGKIVLAGELPTIELKL-RDDLRTRIEAGLCLRVQPLSDQEKHEALQATAQSRGL 186 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +L E+V + L+ R+M +L +D LDR S+ Q+ +++ ++ +K Sbjct: 187 QLSEEVIEYALRYFQRDMGSLMAVMDGLDRFSLEQQKPVSVNLLRHWMK 235 >UniRef50_A1WIR8 Chromosomal replication initiator, DnaA n=19 Tax=cellular organisms RepID=A1WIR8_VEREI Length = 307 Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 17/236 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI------YLWAREGAGRSHL 59 QL L + L T F+ G N + L L+ L YLW G+G++HL Sbjct: 78 QLVLDIGLATVPTLDRFFAGPNGAALQHLRLALGAGRHAATRSPVPSYLWGEPGSGKTHL 137 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L A C L ++G +VG+ LD P D E+ + V +D+++ D + F+ Sbjct: 138 LQAVCQSLREQGASVGW--LDPALSAPP---DFDENWTAVVLDDVQSY--DSARQALAFN 190 Query: 120 LYNRILE--SGKTR-LLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 + + SG R +L G PP L L DL SRL WG +++LQ L + ++ L+ Sbjct: 191 WFVNAISPASGAQRWVLAAGSLPPADLPL-REDLRSRLGWGHVFQLQLLGEAERRSVLRQ 249 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A RG L ++V ++L+R R++ +L L++LD +++ +R +TIP +K +L+ Sbjct: 250 EADARGVFLGDEVMDYMLRRFARDLGSLMQLLERLDAFALSTRRAITIPLLKTMLE 305 >UniRef50_B5EJC4 DnaA regulatory inactivator Hda n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJC4_ACIF5 Length = 237 Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 23/238 (9%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL----- 60 Q LPL + T ++P N++ L A+ ++ + +YL+ G G+SHLL Sbjct: 6 QRILPLGVQAPATLEGYYPCPNAAALHAVLKLVAEPQGLCLYLYGPGGVGKSHLLLGAAS 65 Query: 61 -------HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + C ++ Q + + + E + L+C+DNIE AG Sbjct: 66 ALAGWTPYMDCGDVPQLFNRIKDL----------EGFSSLVAAPLLCLDNIEVWAGQRDK 115 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 E +FDLYN + +G+ +L+ G PR L+ LPD ASR L+ D +++ Sbjct: 116 ETFLFDLYNERMSNGRP-MLLAGRAAPRFLDWALPDWASRASACLQVALRLPDDTERMAI 174 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ A+ RG ++ + +LL+ R+ RTL L LD S QR++TIPF++ L Sbjct: 175 LQEMAQRRGLQIGVEAAHYLLRHHARDPRTLDGLLTILDAGSWEHQREVTIPFIRLCL 232 >UniRef50_A9I600 Chromosomal replication initiator protein dnaA n=5 Tax=Bordetella RepID=A9I600_BORPD Length = 233 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 23/197 (11%) Query: 46 IYLWAREGAGRSHLLHAACA-------ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSL 98 +YLW G GRSHLL A + +Q A+ + +P V Sbjct: 41 VYLWGAAGCGRSHLLRGLAAVPGAMYIDAAQGAQALRQLAGADSAAAMPTV--------- 91 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTR----LLITGDRPPRQLNLGLPDLASRL 154 V ID++ + D+ + +F LYNR E T L + GDR P + L DL +RL Sbjct: 92 VAIDDVHRM--DDARQAGLFALYNRWRECAATSRAFALAVAGDRAPLSMPL-REDLRTRL 148 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 W +++L+PLSD DK AL +A RG +L +V +++L +R++R L LD LDR Sbjct: 149 GWDLVFRLEPLSDADKRAALAAQAAERGLQLAPEVIQWMLTHRERDIRKLAALLDALDRY 208 Query: 215 SITAQRKLTIPFVKEIL 231 S+ R +TIP ++ +L Sbjct: 209 SLATGRPITIPLLRAML 225 >UniRef50_Q3SM75 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM75_THIDA Length = 217 Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSL---LAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 QL L + P F G N+ L LAA+ E S +Y+W G G+++LL A Sbjct: 3 QLLLDVRPPARPDLGHFVVGRNAELMNQLAAMIEGAAVERS--VYVWGAPGTGKTYLLAA 60 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 RG V Y + V D +E D + F +N Sbjct: 61 WARACEARGLTVDY--------------GAQQPAQAVVADQLESWDADR--QHTGFATFN 104 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R+ E+G L G PP +L + P+L +RL WG ++++ L D +K AL A G Sbjct: 105 RVREAGGL-WLAAGSVPPAELPV-TPELRTRLGWGLVFQIHGLDDAEKRAALVHHAETLG 162 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 F L V +LL R+M++L L+ LDR S+ +R +T+P ++++L Sbjct: 163 FRLDTQVADYLLNHTSRDMQSLLRVLEALDRLSLETRRAITLPLLRQLL 211 >UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n=1 Tax=bacterium Ellin514 RepID=B9XCQ3_9BACT Length = 462 Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 21/232 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAEL--SQRGD 72 TF +F G N++ A + Q + ++L+ G G++HLLHA + ++G Sbjct: 131 TFETFVVGGNNNFAHAAAQAVAQAPGKSYNPLFLYGGVGLGKTHLLHAIGHHVLSHKKGA 190 Query: 73 AVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 V YV +K F E +D +++ ++ ID+I+ +AG E + F Sbjct: 191 RVAYVSSEK---FTNEYIDAIQNNQIAKFRKKYRQTDVLLIDDIQFLAGKERIQEEFFHT 247 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + E+ K ++++T DRP ++ L SR +WG + LQP E ++ L+ +A Sbjct: 248 FNALHEAHK-QIVLTCDRPASEIQNLEHRLVSRFEWGLVTDLQPPDIETRMAILRKKAAS 306 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G ELPED+ FL R+ +R L L ++ + +KLTI V+ +L+ Sbjct: 307 MGVELPEDILNFLANRIRANIRRLEGALIRVASYASLTGKKLTIEVVEGLLR 358 >UniRef50_C4KAD4 DnaA regulatory inactivator Hda n=1 Tax=Thauera sp. MZ1T RepID=C4KAD4_THASP Length = 230 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 14/220 (6%) Query: 18 TFASFWPGDNSSLLAALQ-----NVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGD 72 T +F G N+ L+A + Q + +IYLW G+GRSHLL AA G Sbjct: 15 TLENFVAGANAELVATVSLLASPATAEQLPARHIYLWGAPGSGRSHLLRAAVDAARAAGR 74 Query: 73 AVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRL 132 + +PE +L+ ID+ + + ++A+F+ +NR +G++ L Sbjct: 75 PAHLLAAATVEDHLPETPG-----ALLAIDDADQLGA--AAQIALFNAFNRARANGQS-L 126 Query: 133 LITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRF 192 L+ G P L L DL +R+ IY+++PL D+ + + L A RG L ++V F Sbjct: 127 LLCGPAAPLGLALR-EDLRTRIGQSLIYEVKPLDDDARAEILTTLAARRGLRLADEVVDF 185 Query: 193 LLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LL+ RE+ +L LD LDRAS+ +R +T+P ++++++ Sbjct: 186 LLRHGRRELSSLREVLDALDRASLEHKRPITLPLLRDMIQ 225 >UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (Fragment) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP64_9BACT Length = 399 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 26/240 (10%) Query: 10 PLYLPDDETFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAE 66 P YL F+SF G ++ L AA V + Y +++W G G++HL+HA Sbjct: 67 PNYL-----FSSFVVGKSNRLAHAASLAVAESPGAAYNPLFIWGGVGLGKTHLMHAIGHH 121 Query: 67 LSQ--RGDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDEL 112 Q R VGYV +K F E++ +++ + L+ ID+I+ +AG E Sbjct: 122 ALQNDRNLKVGYVSSEK---FTNELITSIKNNRTAEFRARYRTMDLLLIDDIQFLAGKES 178 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N L GK +++++ DRPP+ + L SR +WG + +Q E ++ Sbjct: 179 TQEEFFHTFNS-LHDGKKQIVLSSDRPPKDIKSIEDRLVSRFEWGLVTDIQSPDYETRIA 237 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +A R + +PEDV +L + + +R L L+++ + +T+ E LK Sbjct: 238 ILTKKAEFRNYPMPEDVINYLAQNVPSNIRELEGALNRVIACAELNSEPVTVENTSEWLK 297 >UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSW1_9BACT Length = 469 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 123/236 (52%), Gaps = 16/236 (6%) Query: 13 LPDDETFASFWPGDNSSLL--AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELS 68 L + TFA+F G+ + L A + + H+ + +Y++ G G++H++ + E+ Sbjct: 133 LNPNYTFATFIEGECNRLARSAGMAVAVDPGHTPFNPLYIYGNSGLGKTHIVQSIGHEVR 192 Query: 69 QRGD--AVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 QR V YV ++K + +P+ + + + ++ ID+I+ + G + A Sbjct: 193 QRHPELQVLYVSMNKFQAQFQTAYKNGEIPDFIHFYQMIDVLIIDDIQELTGKTGTQNAF 252 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F+++N + +GK +L++T D+PP +L L +R WG +L + K++ ++++ Sbjct: 253 FNIFNHLQLAGK-QLILTSDKPPVELKDIEQRLLTRFKWGLSTQLNTPDYDTKVKIIRIK 311 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 A+ G +L +++ R+L + +R + L L ++ +K+++ VKEILK+ Sbjct: 312 AQKLGLQLTDEIVRYLADNISANVREIEGALSALVANTVYMGKKVSLSLVKEILKV 367 >UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n=2 Tax=Synergistaceae RepID=C9M5P8_9BACT Length = 443 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 21/240 (8%) Query: 10 PLYLPDDETFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHA-ACA 65 P L + F+SF G ++ L AA V S Y +++W G G++HL+HA Sbjct: 106 PTGLNPNYKFSSFVVGRSNRLAHAASLAVADNPGSAYSPLFIWGGVGLGKTHLMHAIGHH 165 Query: 66 ELSQRGD-AVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDEL 112 L+Q V YV +K F E++ ++ H+ L+ ID+I+ IAG E Sbjct: 166 ALAQNPRLRVTYVSSEK---FTNELITAIKNNKTAEFRSKYRHMDLLLIDDIQFIAGKES 222 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N L K +++++ DRPP++++ L SR +WG + +Q E ++ Sbjct: 223 TQEEFFHTFN-TLHDNKKQIVLSSDRPPKEISDIEERLVSRFEWGLVTDIQQPDYETRIA 281 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+ +A R + LP++V +L + + +R L +L+++ + + ++T+ E LK Sbjct: 282 ILKKKAESRNYPLPDEVAAYLAQNIPSNIRELEGSLNRVIACAELSSEQITVERAVEWLK 341 >UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVY8_9PROT Length = 469 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 20/231 (8%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHA-ACAELSQRGDA 73 TF +F G + AA Q V + + Y +YL+ G G++HL++A A A +S+ Sbjct: 140 TFENFIVGSGNEFCHAAAQAVAEKPGAIYNPLYLYGGVGLGKTHLINAVANALISKNNYR 199 Query: 74 VGYVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIECIAGDELWEMAIFDLY 121 + Y ++ F E++ + + S ++ ID+I+ IAG + + F + Sbjct: 200 IAYRTGER---FTNELIQAIRNGSTDNFRNQYRQVDVLIIDDIQFIAGKDRTQEEFFHTF 256 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + E K ++++T DR PR L + L SR +WG + +QP E +L L +A L Sbjct: 257 NALYEI-KKQIILTSDRSPRDLTNLMERLRSRFNWGLVADIQPPDLETRLAILSSKAELA 315 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G + DV L R+ +R L L +L + R + + F + +L+ Sbjct: 316 GVHMDRDVANLLATRITNNVRELEGALTRLTAHATLTGRTIDVTFARHVLR 366 >UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_ALKOO Length = 451 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 17/230 (7%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF +F G+++ AA V Y ++L+ G G++HL+HA + Q Sbjct: 120 TFDTFVIGNSNRFAHAASLAVAESPAKAYNPLFLYGGVGLGKTHLMHAIGHFILQNNPKA 179 Query: 75 GYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDLYN 122 V + T F E+++ + H + ++ +D+I+ IAG E + F +N Sbjct: 180 KVVYVSSET-FTNELINSIRHDRNVEFRNRFRTIDVLLVDDIQFIAGKESTQEEFFHTFN 238 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + ES K +++I+ DRPP+++ L SR +WG I +QP E ++ L +A++ Sbjct: 239 ALHESNK-QIIISSDRPPKEIPTLEDRLRSRFEWGLITDIQPPDLETRIAILYKKAQMEN 297 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P +V + K++ +R L L ++ S ++T+ E LK Sbjct: 298 IDVPNEVLTHIAKKIQSNIRELEGALIRIVAYSSLTNSEITVELASEALK 347 >UniRef50_Q1Q9M2 Regulatory inactivation of DnaA Hda protein n=4 Tax=Moraxellaceae RepID=Q1Q9M2_PSYCK Length = 270 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 11/195 (5%) Query: 5 AQLSLPLYLPDDETFASF-WPGDNSSLLAALQNVLRQEHSGYI---YLWAREGAGRSHLL 60 AQLSL L + D + + F PG ++ + +RQ H G I YL+ G+SHLL Sbjct: 4 AQLSLNLDIKHDASLSDFAGPG-----WMSIIDAVRQLHVGLIGQLYLFGSPATGKSHLL 58 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A C + + + L++ VL +E+ SL+ ID++E I + W+ A+F L Sbjct: 59 SAICESFIEMDKSAICLSLNELIHTDVNVLSSLENFSLIAIDDLEVIEQNSQWQEALFHL 118 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD-EDKLQALQLRAR 179 NR E G+ +LL ++P +L L DL +RL +K+ D D+ LQ R Sbjct: 119 INRSRE-GQRQLLFAANKPASELPFQLRDLLTRLAQAPSFKVPTGHDFADREALLQSILR 177 Query: 180 LRGFELPEDVGRFLL 194 RG++ E + +LL Sbjct: 178 RRGWQFDERITNYLL 192 >UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n=203 Tax=Bacteria RepID=DNAA_TERTT Length = 593 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 21/231 (9%) Query: 19 FASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR--GDA 73 F +F G ++ L LAA V Y ++++ G G++HL+HA L QR G Sbjct: 264 FDNFVVGKSNQLGLAAASQVAENPGGAYNPLFIYGGVGLGKTHLMHAVGNALVQRKPGAR 323 Query: 74 VGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDLY 121 V Y+ ++ FV +++ ++ + + ID+I+ AG E + F + Sbjct: 324 VVYLHSER---FVADMVKALQLNAISDFKRFYRSVDALLIDDIQFFAGKERSQEEFFHTF 380 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N +LE G+ ++++T D+ P+++N L SR WG ++P E ++ L+ +A Sbjct: 381 NALLEGGQ-QIILTCDKYPKEINGLEERLKSRFGWGLTVAIEPPELETRVAILKRKAESS 439 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LP+D F+ +R+ +R L L ++ + QR +++ V+E LK Sbjct: 440 RMPLPDDAAFFIAQRIRSNVRELEGALKRVIANAQFTQRSISVELVREALK 490 >UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOSM Length = 460 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 25/234 (10%) Query: 18 TFASFWPG-DNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRG--D 72 TF SF G N AA Q V + + Y ++++ G G++HL++A + + Sbjct: 130 TFESFVSGPSNQFAYAASQAVANKPATNYNPLFIYGGVGLGKTHLVNAIGNHILAKNPKA 189 Query: 73 AVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 + Y +K F+ E+++ + + + L+ ID+I+ +AG E + F Sbjct: 190 KICYYSSEK---FMNEMINSLRYKKMDEFRNKFRKMDLLLIDDIQFMAGKEATQEEFFHT 246 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + ES K ++++T D+ P+ + GL + L SR +WG I +QP E K+ L+ ++ Sbjct: 247 FNALYESHK-QIVVTSDKFPKDIP-GLEERLRSRFEWGLIADIQPPGVETKVAILKKKSD 304 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR-ASITAQRKLTIPFVKEILK 232 + LP+DV FL + + +R L L +L+ AS+T Q ++T+ +E++K Sbjct: 305 MHAVNLPDDVALFLAEGANSNIRELEGMLIRLEAFASLTGQ-EITLSMAREVMK 357 >UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n=4 Tax=candidate division TM7 RepID=A5KS09_9BACT Length = 486 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 16/208 (7%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF ++ G N+ L AA Q V + Y I+++ G G++HL+ A E++ A Sbjct: 157 TFETYIVGSNNDLAYAACQAVAKSPGRKYNPIFIYGGVGLGKTHLIQAVGNEIAHTDRAA 216 Query: 75 GYVPLDKRTWFVPEVL-----------DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + ++ T FV E L D ++ ++ ID+I+ IAG E + F +N Sbjct: 217 RILYVNTET-FVNEFLEYIRFKKKGFSDRYRNVDVLIIDDIQFIAGKEKTQEEFFHTFN- 274 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 +L +++I+ D+PPR + L SR +WG +Q E + ++ +A G Sbjct: 275 VLHQANKQIIISSDKPPRSIPTLTERLRSRFEWGMAIDIQIPDFETRSAIIETKASQAGI 334 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQL 211 ELP + ++ + +R L L+QL Sbjct: 335 ELPRETVEYMASNIKTNIRELEGALNQL 362 >UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n=62 Tax=root RepID=DNAA_RHOSR Length = 528 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 14/171 (8%) Query: 46 IYLWAREGAGRSHLLHAACAELSQR---GDAVGYVPLDKRTW-FVPEVLDGME------- 94 +++W G G++HLLHAA +QR G V YV ++ T F+ + D + Sbjct: 225 LFVWGASGLGKTHLLHAA-GHYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRRY 283 Query: 95 -HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 ++ +D+I+ I G E + F +N L + +++++ DRPP+QL L +R Sbjct: 284 RETDVLLVDDIQFIEGKEGIQEEFFHTFN-TLHNANKQIVVSSDRPPKQLATLEERLRTR 342 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +WG I +QP E ++ L +AR+ E+P+DV + R++R +R L Sbjct: 343 FEWGLITDVQPPELETRIAILSKKARMDRLEVPDDVLELIASRIERNIREL 393 >UniRef50_B1Y0G7 DnaA regulatory inactivator Hda n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y0G7_LEPCP Length = 225 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 11/212 (5%) Query: 21 SFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLD 80 +F PG N+ + + + + +YLW G+G++HLL AA A +R V V LD Sbjct: 18 TFLPGANAQWQQVCAALAQPQPATPLYLWGPPGSGKTHLLRAAAALAQERSQLV--VALD 75 Query: 81 KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPP 140 + P D +H L+ +D+ C D + A F L+ + G +L G PP Sbjct: 76 C-SGVPPWEFD--DHTGLLLLDD--CDRYDTRRQQAAFALFVQATTLG-VPVLAAGRLPP 129 Query: 141 RQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR-ARLRGFELPEDVGRFLLKRLDR 199 L + DL +RL WG +Y+L P ED ++AL R A RG L +DV +LLKR R Sbjct: 130 VDLPIR-DDLRTRLGWGLVYQLVP-PGEDHVRALMRREADRRGIVLSDDVIDYLLKRCAR 187 Query: 200 EMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ++ L LD+LD+ ++ +R +T+P V+++L Sbjct: 188 DLSHLMRLLDRLDQQALATKRAVTLPLVRKVL 219 >UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n=11 Tax=Epsilonproteobacteria RepID=DNAA_ARCB4 Length = 438 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 12/197 (6%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDK-RTWFVPEVLD-GMEHL------- 96 ++++ G G++HLL A ++G+ V YV +++ F + + MEH Sbjct: 138 LFIYGGTGLGKTHLLQAVGNHAIEKGNTVIYVTIEQFMNDFTFSIKNKNMEHFRNKYRKC 197 Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLD 155 ++ ID+I+ ++G E + F +N L + K ++++T DR P Q+ GL D L SR + Sbjct: 198 DVLLIDDIQFLSGKEQTQEEFFHTFNE-LHNAKKQIVMTSDRLPSQI-AGLVDRLKSRFE 255 Query: 156 WGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 WG +Q E K+ ++ ++ L G L ++ F+ LD +R + L +++ ++ Sbjct: 256 WGLTADVQIPGLETKIAIIEKKSELNGICLSREIINFIATNLDNSIREIEGVLIRINASA 315 Query: 216 ITAQRKLTIPFVKEILK 232 +++T+P V+ +LK Sbjct: 316 SLLNQEITLPMVQGLLK 332 >UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n=132 Tax=Proteobacteria RepID=DNAA_SACD2 Length = 524 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 23/232 (9%) Query: 19 FASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR--GDA 73 F +F G ++ L LAA V Y ++++ G G++HL+HA L R G Sbjct: 195 FDNFVVGKSNQLGLAAATQVAENPGGSYNPLFIYGGVGLGKTHLMHAVGNALCVRKPGAK 254 Query: 74 VGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDLY 121 V Y+ ++ FV +++ ++ + + ID+I+ AG E + F + Sbjct: 255 VVYLHSER---FVADMVKALQLNAINDFKRYYRSVDALLIDDIQFFAGKERSQEEFFHTF 311 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 N +LE G+ ++++T DR P+++N GL + L SR WG ++P E ++ L+ +A Sbjct: 312 NALLEGGQ-QIILTCDRYPKEIN-GLEERLKSRFGWGLTVAIEPPELETRVAILKRKAEQ 369 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP D F+ +R+ +R L L ++ + R +++ V+E LK Sbjct: 370 VGAPLPNDAAFFIAQRIRSNVRELEGALKRVIANAHFTGRDISVELVREALK 421 >UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n=13 Tax=Clostridiales RepID=DNAA_CLOK1 Length = 451 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 21/232 (9%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA- 73 TF SF G+++ AA V Y ++++ G G++HL+HA + + Sbjct: 119 TFTSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHHILHNNTSC 178 Query: 74 -VGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDL 120 V YV +K F E+++ ++ ++ ++ ID+I+ IAG E + F Sbjct: 179 KVVYVSSEK---FTNELINSIKDDKNVEFRSKYRNIDVLLIDDIQFIAGKERTQEEFFHT 235 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + E+ K +++++ DRPP+++ L SR +WG I +QP E ++ L+ +A + Sbjct: 236 FNALYEANK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQPPDFETRMAILKKKADV 294 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P +V ++ ++ +R L L ++ S +++++ E LK Sbjct: 295 EKLNIPNEVMAYIATKIKSNIRELEGALIRIVAFSSLTNKEISVDLAIEALK 346 >UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRG6_9FIRM Length = 467 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 112/231 (48%), Gaps = 18/231 (7%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF +F GDN+ L AA + V+++ + Y +Y+++ G G++HLL A +E+ + + Sbjct: 133 TFDTFIVGDNNKLAYAACKAVVQEPSTRYNPLYIYSEPGLGKTHLLSAVKSEMEKLHPDM 192 Query: 75 GYVPLDKRTWFVPEVLDGMEHLS-------------LVCIDNIECIAGDELWEMAIFDLY 121 + T F + + + S L+ ID+I+ +A + +F + Sbjct: 193 NIIYTTADT-FTDDYVSNLRTKSNLEAFKQKYRSCDLLLIDDIQFMANKSETQQELFHTF 251 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + K +++ T DRPP++LN L SR + G + + P E ++ ++ +A L Sbjct: 252 NSLYNQNK-QIIFTSDRPPKELNGIEQRLISRFEQGLLADIAPPEYETRIAIIKRKAELY 310 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP+ + FL +L +R L + +++ ++ T+ +++++ Sbjct: 311 GMNLPDSIVDFLADKLKTNIRQLEGAITKINALTLVTGSTPTLNMAQQVVR 361 >UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOMG Length = 450 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 25/247 (10%) Query: 4 PAQLSLPLYLPDDETFASF-WPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLL 60 PA+ S L TF +F G N AA +V Y ++++ G G++HLL Sbjct: 108 PAEFSTNLNAK--YTFDTFVCGGSNQFAHAAALSVANNPAGKYNPLFIYGGVGLGKTHLL 165 Query: 61 HAACAEL--SQRGDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIEC 106 A ++ R V + +K F+ E+++ + + + L+ ID+I+ Sbjct: 166 TAIGNQVLTKNRKARVCFYTSEK---FMNELINCLRYQKMEQFRNKFRKMDLLLIDDIQF 222 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPL 165 IAG E + F +N + ES K ++++T D+ P+ + GL + L SR +WG I +QP Sbjct: 223 IAGKERTQEEFFHTFNALYESHK-QIVVTSDKFPKDIP-GLEERLRSRFEWGLIADIQPP 280 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E K+ L +A G LP+DV FL +R L L +L + + +T+ Sbjct: 281 DTETKVAILSKKADSDGIRLPDDVALFLASSASTNVRELEGMLIRLGAVASLTGKNITLD 340 Query: 226 FVKEILK 232 +E+LK Sbjct: 341 MAREVLK 347 >UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n=19 Tax=Firmicutes RepID=DNAA_CLONN Length = 448 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 21/232 (9%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR--GD 72 TF SF G+++ AA V Y ++++ G G++HL+HA + Q Sbjct: 116 TFDSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHYILQNTPNA 175 Query: 73 AVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDL 120 V YV +K F E+++ ++ ++ ++ ID+I+ IAG E + F Sbjct: 176 KVVYVSSEK---FTNELINSIKDDKNEEFRNKYRNVDVLLIDDIQFIAGKERTQEEFFHT 232 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + E+ K +++++ DRPP+++ L SR +WG I +Q E ++ L+ +A + Sbjct: 233 FNALYEADK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETRIAILKKKADV 291 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P +V ++ ++ +R L L ++ S R++++ E LK Sbjct: 292 ENLDIPNEVMVYIATKIKSNIRELEGALIRIVAYSSLTNREISVDLAAEALK 343 >UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridiales RepID=C0EA18_9CLOT Length = 454 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 15/201 (7%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF +F G N+ AA + V +Q+ Y ++++ G G++HLL A E+ ++ Sbjct: 122 TFDTFIVGSSNTFAYAACKAVAQQQSGAYNPLFIYGPSGLGKTHLLMAISHEIKRQNPDT 181 Query: 75 GYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + ++ + E + + ++ +D+I+ +AG + F +N Sbjct: 182 NILYINGEAFANELITAIGRQATNEFREKYRRVDILLMDDIQFLAGKTQTQEEFFYTFND 241 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + + GK ++++T DRPP+ + L +R +WG + + P E ++ ++ +A+L Sbjct: 242 LHQVGK-QIVLTSDRPPKDIKTLEERLRTRFEWGLLADISPPDFETRIAIIRRKAQLLDI 300 Query: 184 ELPEDVGRFLLKRLDREMRTL 204 E+P++V F+ RL +R L Sbjct: 301 EMPDEVAEFIANRLKNNIRQL 321 >UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n=3 Tax=Gammaproteobacteria RepID=DNAA_PASMU Length = 451 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 119/249 (47%), Gaps = 23/249 (9%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR----QEHSGYIYLWAREGAGRS 57 N P Q + YL F +F G ++ L A+ + + S ++L+ G G++ Sbjct: 105 NKP-QTVIRSYLNPKHVFENFVEGKSNQLARAVAQKVADNPGEPSSNPLFLYGGTGLGKT 163 Query: 58 HLLHA-ACAELSQRGDA-VGYVPLDKRTWFVPEVLDGME------------HLSLVCIDN 103 HLLHA LS+ +A V Y+ + F+ ++++ + L + +D+ Sbjct: 164 HLLHAIGNGILSRNTNARVLYIHANN---FMQQMVNAVRDNKMDEFKKFYRSLDALLVDD 220 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 I+ A E + F ++N + ++G+ ++++T DR P+++ L SR WG ++ Sbjct: 221 IQFFAEKEKTQEEFFHIFNNLFDTGR-QIILTSDRYPKEIEKLEERLKSRFGWGLTTAIE 279 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 P E ++ L +A + LPE+V F+ ++L +R L L+++ + +T Sbjct: 280 PPELETRVAILLKKAEEKNIYLPEEVAFFIGQKLRTNVRDLEGALNRVSANAEFMGAAIT 339 Query: 224 IPFVKEILK 232 I FV+E LK Sbjct: 340 IDFVRETLK 348 >UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQD8_9BACE Length = 426 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 114/220 (51%), Gaps = 25/220 (11%) Query: 12 YLP--DDETFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAE 66 +LP +D TF F G ++ AA +V Y ++++ G G++HLL+A + Sbjct: 84 FLPGTEDYTFERFVVGSSNKFAHAAALSVAENPGKSYNPLFIYGESGLGKTHLLYAIAHK 143 Query: 67 L-SQRGD-AVGYVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIECIAGDEL 112 + + R D V Y+ D F E++ + S + +D+++ IAG E Sbjct: 144 IHATRPDFRVVYIKGDA---FTNELIQAIREGSNQEFREKFRSADVFLMDDVQFIAGRES 200 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKL 171 + +F +N + E+G+ +++ T DRPP+++ L L D L +R +WG ++P E ++ Sbjct: 201 SQEEMFHTFNTLYEAGR-QIVFTADRPPKEM-LRLDDRLKTRFEWGLPVDIKPPDYETRV 258 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 ++ +A RG ELPE V +++ + + +R + T++++ Sbjct: 259 AIIKNKAIRRGMELPEPVLQYIAENITSNVRQIEGTVNKI 298 >UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=DNAA_THERP Length = 465 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 26/205 (12%) Query: 46 IYLWAREGAGRSHLLHA-ACAELSQRGD-AVGYVPLDKRTWFVPEVLDGMEH-------- 95 ++++ G G++HLLHA L+ R V YV + F E+++ + H Sbjct: 155 LFIYGGVGLGKTHLLHAIGHRALANRPTLKVCYVSSE---VFTNELINAIRHQRTDDFRN 211 Query: 96 ----LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 + ++ ID+I+ IAG E + F +N + +SGK +++I+ DRPPR +PDLA Sbjct: 212 RYRTIDILMIDDIQFIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPRL----IPDLA 266 Query: 152 ----SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMT 207 SR + G + +QP E + L + R G ++P DV F+ +R++ +R L Sbjct: 267 DRLRSRFEGGLLADIQPPDLETRQAILIEKGRELGVQMPSDVVEFVARRIESNIRELEGA 326 Query: 208 LDQLDRASITAQRKLTIPFVKEILK 232 L+++ + + +T+ E L+ Sbjct: 327 LNRIVALAQLTHQPITLALAVEALR 351 >UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM39_9BACT Length = 446 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 26/239 (10%) Query: 13 LPDDETFASFWPG-DNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 L D TFA+F G N +A + V + Y ++++ G G++HL+HA + + Sbjct: 108 LNRDYTFANFVAGGSNEFSFSACEAVSEGQFMQYNPLFIYGGSGLGKTHLMHAVGNRILE 167 Query: 70 RGDAVGYVPLDKRTWFVPEVLDG-----MEH-------LSLVCIDNIECIAGDELWEMAI 117 + + + + T F ++++ ME + ++ D+++ ++G + Sbjct: 168 KFPKMKVLYITSET-FTNDMINSLRTRKMEEFQARYRTIDVLLFDDVQFLSGKQRSTEEF 226 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPD----LASRLDWGQIYKLQPLSDEDKLQA 173 F+ +N + ++ K +++IT D+ P ++ PD L SR WG I +QP S E+K Sbjct: 227 FNTFNALYDNQK-QIIITSDKTPAEI----PDMEDRLKSRFAWGLIADIQPPSTEEKTAI 281 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDRE-MRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L RA G +LP +V F+ + + E +R L L +L + +R LTI K+ L Sbjct: 282 LMKRAEFMGLKLPGEVALFIAENMITENVRELMGALVRLSAFASFHKRGLTIDLAKDAL 340 >UniRef50_B2HWV0 ATPase involved in DNA replication initiation n=14 Tax=Acinetobacter RepID=B2HWV0_ACIBC Length = 232 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 10/203 (4%) Query: 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92 + +RQ H+G + Y++ G G+SHLL A C + G + V L + E + Sbjct: 29 DAVRQLHAGLVNRFYIYGGAGTGKSHLLSAICDSYLEVGKSAIKVSLLELLDAPIEAITC 88 Query: 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152 +EH LV +D+IE I+G W+ A+F L N + + +L+ + P +L L LPDL S Sbjct: 89 LEHYDLVALDDIESISGVPHWQKAVFHLMN----NHEGQLVFSSRVAPIELKLELPDLQS 144 Query: 153 RLDWGQIYKLQPLSDEDKLQAL--QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ 210 RL K+ S AL + AR RG + + +LL + L T+ Q Sbjct: 145 RLTQAVSVKVPSGSLYADRYALVTSVMAR-RGIHFDQQIVDYLLLHGPHQASILLQTVAQ 203 Query: 211 LDRASITAQRKLTIPFVKEILKL 233 L++ + KL+ +++I L Sbjct: 204 LEKLLKGEKTKLSNATLRQIYAL 226 >UniRef50_Q1GFH7 Chromosomal replication initiator DnaA n=6 Tax=Rhodobacteraceae RepID=Q1GFH7_SILST Length = 225 Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 18/206 (8%) Query: 22 FWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDK 81 F+ ++++ AL + SG + L +G+G++HL H E R VP Sbjct: 20 FFVAPSNAMAVALIDPAFAWPSGKLVLTGPKGSGKTHLAHVWAKESGAR-----VVPAHA 74 Query: 82 RTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPP 140 T VPE+ G V I+++ IA D L + A+F L+N +L G RL++TG P Sbjct: 75 LTEADVPELASGP-----VAIEDVPDIAEDALAQKALFHLHNMVLTHGH-RLMLTGRPAP 128 Query: 141 RQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL---RGFELPEDVGRFLLKRL 197 LGL DL SR+ L+ + +D L A+ L A+L R DV +L+ R+ Sbjct: 129 NLWGLGLADLQSRVQAATHAALE--APDDALLAVVL-AKLFNDRQITPKPDVIPYLVGRM 185 Query: 198 DREMRTLFMTLDQLDRASITAQRKLT 223 DR ++QLDR ++ QR L+ Sbjct: 186 DRSFAAAAAVVEQLDRLALAEQRTLS 211 >UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N7_COPPD Length = 543 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 18/230 (7%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY----IYLWAREGAGRSHLLHAACAELSQRGDA 73 TF F GD++ L A + E+ G +++W G G++HLLHA L Q+ + Sbjct: 211 TFDEFVVGDSNRLAYAGARAV-AENPGKRFNPLFIWGGVGLGKTHLLHAIGNYLLQQQEP 269 Query: 74 VGYVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIECIAGDELWEMAIFDLY 121 V F E+++ ++ S ++ ID+I+ IAG E + F + Sbjct: 270 DMQVLYITAEEFTNEMVESIKKNSPEDFRAHYRTVDVLLIDDIQFIAGKEATQTEFFHTF 329 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + ++GK +++IT D PP++L L L SR G +Q E ++ L+ +A+ Sbjct: 330 NTLYQAGK-QIVITSDHPPQELTLLEDRLRSRFQQGLTVDIQRPDFETRVAILERKAQKE 388 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G ++P +V F+ + +R L L ++ + +T+ K+ L Sbjct: 389 GLDVPSEVIEFIAHAVATNIRELEGALTKVTALATLQNVPMTLGLAKQAL 438 >UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9G6_ACIC5 Length = 478 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 18/180 (10%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDA--VGYVPLDKRTWFVPEVL------------D 91 ++L+ G G++HL+HA E+ R + + YV ++K F E++ D Sbjct: 179 LFLYGGVGMGKTHLMHAIGHEVKLRNPSASICYVSVEK---FTNEMISSLRYDKMTTFRD 235 Query: 92 GMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 + L+ ID+I+ ++ E + F +N + E+ K +++I DRPP++L L Sbjct: 236 KFRSVDLLLIDDIQFLSQKERTQEEFFHTFNALHENMK-QIVIASDRPPKELPEIEDRLR 294 Query: 152 SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 SR +WG I +QP E K+ LQ +A LP DV F+ + +R L L +L Sbjct: 295 SRFEWGLIADIQPPDLETKVAILQKKAESEHVLLPTDVALFIASNVRTNVRELEGALTRL 354 >UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n=40 Tax=Gammaproteobacteria RepID=DNAA_PSYIN Length = 458 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 24/234 (10%) Query: 18 TFASFWPG-DNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHA-ACAELSQRGDA 73 TF +F G N+ +A Q + Y ++L+A G G++HLLHA A L++ ++ Sbjct: 127 TFDNFVEGKSNNFAIATTQQIAENPGDVYNPLFLYAHPGLGKTHLLHAVGNAILAENPES 186 Query: 74 -VGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ ++ FV ++++ + + L + ID+I AG + + +F Sbjct: 187 KVVYIRSER---FVQDMINSIRNNTIEQFKEYYASLDALLIDDIHFFAGKDRSQEVLFQT 243 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +L++ + ++++T DR P+++ L +R WG + P E ++ L +A Sbjct: 244 FNSMLDAHQ-QVILTSDRFPKEIEGIDERLRTRFGWGLSIPIDPPELETRVAILITKAEE 302 Query: 181 RGFELPEDVGRFLLKRLD-REMRTLFMTLDQLD-RASITAQRKLTIPFVKEILK 232 RG +LP+DV F+ KRL ++R L + + +A T Q +TI V++ L+ Sbjct: 303 RGLKLPDDVAFFIAKRLTITDVRVLEGAIANISAKAQFTGQ-GITISLVQDALR 355 >UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ52_9GAMM Length = 446 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 14/213 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAAL----QNVLRQEHSGYIYLWAREGAGRSHLLHAACAEL 67 Y+ TF F ++ + ++ N L Q + ++++ G G++HL+ A E+ Sbjct: 111 YIDPHFTFDQFVTAKSNQIAYSICRETANNLGQSKNNPLFIYGATGLGKTHLMQAIAHEI 170 Query: 68 SQRGDAVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++G + Y DK RT + E D ++ L+ ID+I IAG + Sbjct: 171 LKQGKSFYYFTSDKFVNQLVHSLRTQKIDEFKDKIKKADLLIIDDIHVIAGKQKSSEQFL 230 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L N + K ++++ D+ P L L SRL WG L+P E ++Q LQ ++ Sbjct: 231 LLLNDFMSKNK-QVILASDKHPSALTDFDERLKSRLAWGVAVALEPPELETRIQILQKKS 289 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 + + LP++ F+ + + +R L L+++ Sbjct: 290 KAQEVILPKECAIFIAQHIIANVRELEGALNKV 322 >UniRef50_C0VIG7 DnaA family chromosomal replication initiator n=3 Tax=Acinetobacter RepID=C0VIG7_9GAMM Length = 232 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 8/202 (3%) Query: 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92 + +RQ H+G + Y++ G G+SHLL A C + G V L E + Sbjct: 29 DAVRQLHTGLVSRLYIYGGAGTGKSHLLSAICDSYLELGRPAIKVSLLALLDAPIEAITA 88 Query: 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152 +E LV +D+I+ I+G W+ A+F L N + + +L+ + P +L L LPDL S Sbjct: 89 LEFYDLVALDDIDAISGVPHWQKAVFHLMN----NHEGQLVFSSRVAPIELKLELPDLQS 144 Query: 153 RLDWGQIYKLQPLSD-EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 RL K S D+ LQ RG + + +LL + L TL QL Sbjct: 145 RLTQAVSVKAPNGSSFVDRQALLQSVMTRRGIHFDQQIVDYLLHNGPHQASILLQTLAQL 204 Query: 212 DRASITAQRKLTIPFVKEILKL 233 ++ + KL+ +K+I L Sbjct: 205 EKMLKGEKTKLSNTTLKQIYAL 226 >UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridia RepID=A4XFI1_CALS8 Length = 454 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 104/213 (48%), Gaps = 23/213 (10%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY-----IYLWAREGAGRSHLLHAACAELSQ--R 70 TF +F G+N+ L A + + G ++++ G G++HL+HA + + Sbjct: 117 TFETFVVGNNNRLAHAAALAVAETPPGEKTYNPLFIYGGVGLGKTHLMHAIGHHVLKLYP 176 Query: 71 GDAVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIF 118 V YV + F E++ + ++ ++ ID+I+ + G E + F Sbjct: 177 DTKVMYVTSE---IFTNELIAAIRDEKTDEFRMKYRNVDVLLIDDIQFLGGKERTQEEFF 233 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K +++++ DRPP+++N L SR +WG I +QP E ++ L + Sbjct: 234 HTFNTLYEANK-KIILSSDRPPKEINTLEDRLRSRFEWGLITDIQPPDFETRIAILSKKC 292 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 +L G +P+ + F+ +++ +R L L+++ Sbjct: 293 QLEGTPVPQHILEFIASKIETNIRELEGALNKI 325 >UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNAA_THEYD Length = 438 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHA----------- 62 TF +F G S+ A + E+ G+ Y ++ G G++HL+ A Sbjct: 107 TFDTFVVGP-SNQFAHAASFRVAENPGFAYNPLFIYGGVGLGKTHLITAIGNYILDKKPE 165 Query: 63 --ACAELSQR--GDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 C S++ G+ V + +K +PE + + + +D+I+ IAG + + F Sbjct: 166 MNVCYISSEQFTGEFVSAIRHEK----MPEFRNKYRTVDVFLVDDIQFIAGKDSTQEEFF 221 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N L S + +++I+ DRPP +++ L SR G I +QP E +L L +A Sbjct: 222 HTFNE-LYSKQKQIVISSDRPPMEISDITDRLRSRFGMGLIADIQPPEIETRLAILYKKA 280 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 + G +LPEDV F+ R+ +R L +L +L Sbjct: 281 DMEGVKLPEDVAYFIASRVKSNVRELEGSLIKL 313 >UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=Q1IVU4_ACIBL Length = 461 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 27/245 (11%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLL-- 60 AQL+ P Y+ D+ F + PG N AA + V + Y ++L+ G G++HL+ Sbjct: 124 AQLN-PKYIFDN--FVT-GPG-NQFAHAASRAVADRPSKTYNPLFLYGGVGMGKTHLMQA 178 Query: 61 -----------HAACAELSQR--GDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECI 107 H+ C S++ D + V DK T F + + ++ ID+I+ I Sbjct: 179 IGHTIKRNNPEHSICYVSSEKFTNDMINSVRYDKMTSF----RERYRTVDVLLIDDIQFI 234 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 A E + F +N + E K +L+I DRPP++L L SR +WG I +QP Sbjct: 235 ARKERTQEEFFHTFNALHEQQK-QLVIASDRPPKELAEIEDRLRSRFEWGLIADIQPPDL 293 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E K+ LQ +A +LP DV F+ + +R L L +L S +L + Sbjct: 294 ETKVAILQKKAESERTQLPTDVALFIASNIRSNVRELEGALIRLVAYSSLTGGELNLMTA 353 Query: 228 KEILK 232 +++LK Sbjct: 354 QQVLK 358 >UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D49_SOLUE Length = 437 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 15/229 (6%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAEL-SQRGDA 73 TF SF G N AA ++V Y ++L+ G G++HL+HA +L Q G Sbjct: 108 TFNSFVVGACNQFAHAAAKSVATNPSRSYNPLFLYGGVGMGKTHLMHAIGRQLIDQFGSM 167 Query: 74 -VGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + Y ++ RT + + ++ ID+I+ + E + F +N Sbjct: 168 RIIYTSSERFMNEMISCIRTERMQQFHQRYREADVLLIDDIQLLGNKERTQEEFFHTFNE 227 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + + K +++I+ D PP+ + L L SR +WG + +QP E K+ L +A + G Sbjct: 228 LHDHQK-QIVISSDSPPKDIPGLLERLRSRFEWGLMADIQPPDLETKMAILDKKAEIEGV 286 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ELP+DV F+ + +R L L +L S + + +++LK Sbjct: 287 ELPDDVRTFMASKTKSNVRELEGALVKLIAYSSLTGTPIHLQMAQQVLK 335 >UniRef50_C7I3Q1 Sigma 54 interacting domain protein (Fragment) n=1 Tax=Thiomonas intermedia K12 RepID=C7I3Q1_THIIN Length = 172 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 11/173 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPG---DNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 + T Q LPL D+ +F +F PG +N+ L AL ++L+Q +YLW G+G+S Sbjct: 2 LQTTRQQILPLEWQDERSFENFDPGVQPENALALQALHDLLQQRRHNALYLWGETGSGKS 61 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLD--GMEHLSLVCIDNIECIAGDELWEM 115 HLL AAC EL ++G + P+V D + L+ +D+ + ++ W+ Sbjct: 62 HLLWAACRELQKQGRWALLLNPQTPASAWPDVTDLLAQQAGGLLAVDDAQQLSD---WQQ 118 Query: 116 A-IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 +F LYN S + L G+ P L+L DL +RL WG +LQ D Sbjct: 119 DWLFGLYN-AARSAELAFLACGNAAPAALSL-RTDLRTRLSWGLALRLQAPDD 169 >UniRef50_B6IN53 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IN53_RHOCS Length = 238 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 8/187 (4%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIE 105 + L+ G+G+SHL A R AV P D VP++L M V +D Sbjct: 47 LVLFGPPGSGKSHLAQIWRA----RSRAVLVEPDDLHLDSVPDLLRPMR---TVVLDRAH 99 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 +AGD E +F LYN E G + LL+ D P L LPDL SRL + Sbjct: 100 EVAGDPARERVLFHLYNAAKEIGGS-LLLLADNAPVNWVLRLPDLRSRLLAAPAVGMAAP 158 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 D + L R + EDV R+L+ R +R ++ LDRA++ A++ +T+P Sbjct: 159 DDALLMAVLVKLFADRQIRVGEDVIRWLMTRTERSFANARRVVEALDRAALEAKKPITVP 218 Query: 226 FVKEILK 232 F K +L+ Sbjct: 219 FCKAVLE 225 >UniRef50_UPI0001BCD63C chromosomal replication initiation protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD63C Length = 478 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 34/248 (13%) Query: 2 NTPAQLSLPLY---------LPDDET-------FASFWPGDNSSLLAALQNVLRQE---- 41 +TPAQ SLPL PDD T F +F G ++ A+ + Sbjct: 114 DTPAQGSLPLTPTPSDTHAAAPDDATTLNPKYTFDAFVTGRSNQFPYAMAKAVADAPGLP 173 Query: 42 HSGYIYLWAREGAGRSHLLHAACAE-LSQRGDA-VGYV-PLDKRTWFVPEV----LDGME 94 ++++ G G++HL+HA + L+ D V Y+ D F+ + +D Sbjct: 174 SHNPLFIYGGVGLGKTHLMHAVGHKILADHPDRRVLYIASTDFTNEFIRSIREKNMDAFR 233 Query: 95 H----LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD- 149 + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + GL D Sbjct: 234 EKYYSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVK-GLEDR 291 Query: 150 LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLD 209 L SR G +QP E ++ LQ +A+ ++PEDV ++ R+D +R L L Sbjct: 292 LISRFAGGAPVDIQPPEFETRVAILQKKAQSEEVDIPEDVVTYIASRVDSNIRELEGALT 351 Query: 210 QLDRASIT 217 +L + + T Sbjct: 352 RLIKYAST 359 >UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n=60 Tax=Alphaproteobacteria RepID=DNAA_GLUOX Length = 479 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 117/230 (50%), Gaps = 17/230 (7%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHS-GY--IYLWAREGAGRSHLLHAACAELSQRGD- 72 TF +F G N A + V + S G+ ++L+ G G++HL+HA EL++ G Sbjct: 149 TFDTFIVGKPNEFAYACARRVAEKPSSPGFNPLFLYGGVGLGKTHLMHAIGTELTRTGKV 208 Query: 73 AVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 +V Y+ +K R+ E + + + ++ ID+++ + G + + F +N Sbjct: 209 SVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRSVDVLMIDDLQFLIGKDNTQEEFFHTFNA 268 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 ++++G+ +++++ D+ P L+ GL D L +RL G + + + E ++ L+ +A+ G Sbjct: 269 LVDAGR-QIIVSADKSPSDLS-GLEDRLRTRLGCGMVADIHATTFELRISILEAKAKASG 326 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P V +L ++ +R L L++L + R +T+ +++LK Sbjct: 327 THVPSKVLEYLAHKITTNVRELEGALNRLIAHADLVGRPVTLDTTQDVLK 376 >UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n=9 Tax=Alphaproteobacteria RepID=C7JHC5_ACEP3 Length = 477 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 116/229 (50%), Gaps = 17/229 (7%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHS-GY--IYLWAREGAGRSHLLHAACAELSQRGD- 72 TF +F G N A + V + S G+ ++L+ G G++HL+HA AEL Q G+ Sbjct: 147 TFDTFVVGKPNEFAYACARRVAEKPSSVGFNPLFLYGGVGLGKTHLMHAIGAELIQSGNV 206 Query: 73 AVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 +V Y+ +K R+ E + + + ++ ID+++ + G + + F +N Sbjct: 207 SVAYMSAEKFMYRFIAAIRSQSTIEFKEQLRSVDVLMIDDLQFLIGKDNTQEEFFHTFNA 266 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 ++++G+ +++++ D+ P L+ GL D L +RL G + + + E ++ L+ +A G Sbjct: 267 LVDAGR-QIVVSADKSPSDLS-GLEDRLRTRLGCGMVADIHATTFELRISILESKAAASG 324 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P V FL ++ +R L L++L + R +T+ +E+L Sbjct: 325 VVVPGKVLEFLAHKITSNVRELEGALNRLIAHANLFGRPVTLEATQEVL 373 >UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJZ7_RHOM4 Length = 503 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 22/233 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAA--CAELSQRG 71 TF F GD + L + + Q+ + ++ G G++HL+ A A Sbjct: 169 TFERFIEGDCNRLARSAALAIAQQPGATSFNPFLVYGGVGLGKTHLIQAIGNYARQHHTA 228 Query: 72 DAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFD 119 + + YV ++ F E + ++H + L+ +D+I+ G E + F Sbjct: 229 ETIRYVSSEQ---FTNEFVQAIQHNRINEFSLFYRHIDLLIVDDIQFFGGKEKTQEEFFH 285 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 ++N + ++GK +++++ DRPP+ + L SR WG + +QP E ++ L+ +A Sbjct: 286 IFNALHQTGK-QIVLSADRPPKDIPGIEERLLSRFQWGLMADVQPPDLETRIAILRRKAE 344 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G EL +DV F+ + R L L +L + +R + + +E L+ Sbjct: 345 DEGIELGDDVIEFIAHHVKSNFRELEGALLRLVAHAAYQRRDIDLALAREALR 397 >UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5C4_SPHTD Length = 471 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 14/198 (7%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEH---------- 95 +Y++ G G++HLLHA R + + T F E+++ + Sbjct: 168 LYIYGGVGLGKTHLLHAIGHRALARSPELRIRYVSSET-FTNELINAIRQQRTEDFRNRY 226 Query: 96 --LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + ++ ID+I+ IAG E + F +N + +SGK +++I+ DRPP+ + L SR Sbjct: 227 RTIDILMIDDIQFIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPKAIPTLADRLRSR 285 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 + G + +QP E + L + R G +P+DV ++ ++++ +R L L+++ Sbjct: 286 FEGGLLADIQPPDLETRAAILAEKGRELGVTVPDDVLEYVARKVESNIRELEGALNKIIA 345 Query: 214 ASITAQRKLTIPFVKEIL 231 S R +++ E L Sbjct: 346 LSQLYHRPISMELAIEAL 363 >UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MHN4_9BACT Length = 451 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 25/248 (10%) Query: 4 PAQLSLPLYLPDDE-TFASFWPGDNSSL-----LAALQNVLRQEHSGYIYLWAREGAGRS 57 P Q + LP+ + TF +F G ++ LA ++ R + +IY G G++ Sbjct: 106 PQQTRVHRQLPNPKYTFENFVVGASNQFAHAASLAVAESPARSYNPFFIYGGV--GLGKT 163 Query: 58 HLLHAACAELSQRGD-AVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNI 104 HLL++ + Q+GD + YV ++ F EV++ + + + ++ ID+I Sbjct: 164 HLLNSIGNFVMQKGDLRIAYVTTEE---FTNEVINSIRYDKMSELRRRYRNIDMLLIDDI 220 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + +AG E + F +N + E+ K +++++ DR P+++ L SR +WG I LQ Sbjct: 221 QFLAGKERTQEEFFHTFNALYEARK-QIVLSSDRFPKEMPSMEERLRSRFEWGLIADLQQ 279 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E ++ L+ ++ G + +DV L + L +R L L +L + +T Sbjct: 280 PDVETRIAILKKKSEEEGIAIGDDVIHLLAEGLKSNIRELEGALIRLGAYCTLTGQAITT 339 Query: 225 PFVKEILK 232 K +L+ Sbjct: 340 DMAKTVLR 347 >UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n=56 Tax=Alphaproteobacteria RepID=DNAA_ANAMM Length = 471 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 19/231 (8%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEH----SGYIYLWAREGAGRSHLLHAACAEL--SQR 70 TF +F G + L AA + V S ++L+ G G++HL+HA + S Sbjct: 140 TFDNFVVGKPNELAFAAARRVAESSAPIPGSNPLFLYGGVGLGKTHLMHAIAWYILNSSV 199 Query: 71 GDAVGYVPLDKRTWFVPEVL---------DGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + Y+ +K + L + + ++ +D+++ I+G + + F + Sbjct: 200 KRKIAYLSAEKFMYQYVTALRSKDIMLFKEQFRSVDILMVDDVQFISGKDSTQEEFFHTF 259 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 N +++ K +L+I+ DR P L+ G+ D + SRL WG + + + E +L LQL+ Sbjct: 260 NALIDQNK-QLVISADRSPSDLD-GVEDRIKSRLGWGLVADINETTFELRLGILQLKIEK 317 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G +P +V FL K + +R L L+++ S R +TI IL Sbjct: 318 MGVHVPNEVLEFLAKNIKSNIRELEGALNKVVAHSSLVGRSVTIESASGIL 368 >UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n=8 Tax=Bacteria RepID=DNAA_XYLFT Length = 439 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 3/141 (2%) Query: 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152 + + ID+I+ AG + + F +N + + GK ++++T DR PR++N P L S Sbjct: 198 FHQIDALLIDDIQFFAGKDRTQEEFFHTFNALFD-GKQQIILTCDRYPREVNGLEPRLKS 256 Query: 153 RLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL- 211 RL WG + P E + + +AR RG +P++V + K++ +R L L+ L Sbjct: 257 RLAWGLSVAIDPPDFETRAAIVLAKARERGATIPDEVAFLIAKKMHSNVRDLEGALNTLV 316 Query: 212 DRASITAQRKLTIPFVKEILK 232 RA+ T R +TI F +E L+ Sbjct: 317 ARANFTG-RAVTIEFSQETLR 336 >UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n=5 Tax=Dehalococcoides RepID=Q3ZAJ3_DEHE1 Length = 445 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 27/222 (12%) Query: 18 TFASFWPGD-----NSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAA--CAELSQR 70 TF SF G +++ LAA QN + + YIY A G G++HLL A A L++R Sbjct: 109 TFESFIVGSCNRLAHAASLAATQNPGKSYNPLYIYAAA--GLGKTHLLQAIGHLANLNRR 166 Query: 71 GDAVGYVPLDKRTW-FVPEVLDGMEH--------LSLVCIDNIECIAGDELWEMAIFDLY 121 YV ++ T F+ + +G + L+ +D+++ I G E E +F + Sbjct: 167 --KALYVSGEQFTTDFISSIRNGQTEEFRARYRDVDLLLLDDVQFIGGKEQTEECLFHTF 224 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + S + +++I+ D PP+ L L SR +WG +++P ++ +L+ LQL+A Sbjct: 225 NDLHNSNR-QIVISADSPPKSLPQLAERLRSRFEWGLTIEIEPPDEKTRLELLQLKAEQS 283 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLD------QLDRASIT 217 G EL D +L + + +R L +L+ +L RA+IT Sbjct: 284 GTELNMDTLEYLAQEVKHNIRELEGSLNRVLAYARLLRATIT 325 >UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1P4_9FIRM Length = 473 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 34/245 (13%) Query: 4 PAQLSLPLY-------LPDDET-------FASFWPGDNSSLLAALQNVLRQE----HSGY 45 PAQ SLPL PDD T F +F G ++ A+ + Sbjct: 113 PAQGSLPLTPPETHAAAPDDTTTLNPKYTFEAFVTGRSNQFPYAMAKAVADAPGLPSHNP 172 Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEH---------- 95 ++++ G G++HL+HA ++ D V T F E + + Sbjct: 173 LFIYGGVGLGKTHLMHAVGHKILA-DDPKKRVLYIASTDFTNEFIRSIREKNMDAFREKY 231 Query: 96 --LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LAS 152 + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + GL D L S Sbjct: 232 YSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVK-GLEDRLIS 289 Query: 153 RLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLD 212 R G +QP E ++ LQ +A+ ++P DV ++ R+D +R L L +L Sbjct: 290 RFAGGAPVDIQPPEFETRVAILQKKAQSEDVDIPADVVTYIASRVDSNIRELEGALTRLI 349 Query: 213 RASIT 217 + + T Sbjct: 350 KYAST 354 >UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YPZ2_AZOPC Length = 455 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 33/215 (15%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGRSHLLHAACAELS 68 L + +TF +F+ DN+ + + + QE + Y +++ G G++HL HA Sbjct: 120 LNNRQTFRNFFESDNNKVAYVIAQKVAQEPGKDFNPY-FIYGGPGVGKTHLCHAI----- 173 Query: 69 QRGDAVGYVPLDKRTWFVP------------------EVLDGMEHLSLVCIDNIECIAGD 110 G+ V KR ++P E + + + ++ +D+I ++G Sbjct: 174 --GNKVTEFHFQKRVIYIPAHLFQIQYTDSIRKHEPNEFIHFYQGIDILILDDIHELSGK 231 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDED 169 E A F ++N + + G+ ++++T D+ P ++ +GL + L SRL WG +LQ E Sbjct: 232 EKTLQAYFHIFNHLHQLGR-QIILTADKIPAEI-IGLEERLTSRLKWGLTIELQKPDLEL 289 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 + + L R R R +PE+V ++ + + R L Sbjct: 290 RKKILNYRIRQRRLSVPEEVIDYIAENVPENARDL 324 >UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A8SBW1_9FIRM Length = 440 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 21/212 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWAREGAGRSHLLHAACAELSQRGD-- 72 TF +F G ++ A + SG ++++ G G++HLL A E+ + Sbjct: 109 TFENFIKGPSNQFAFAAAQAVAANPSGAYNPLFIYGGSGLGKTHLLTAIQTEIKRTHPDF 168 Query: 73 AVGYVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIECIAGDELWEMAIFDL 120 + YV ++ F E++ + S L+ +D+I+ IAG E + F Sbjct: 169 VIMYVTCEQ---FTNELIAAIRAGSTEDFRMKYRVADLLLVDDIQFIAGKESTQEEFFHT 225 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + ++ K +++I DRP +++ L +R +WG +QP E ++ ++ +A L Sbjct: 226 FNSLHDAHK-QIVIASDRPAKEIKSLEERLRTRFEWGLTADVQPPDFETRVAIVKRKAEL 284 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLD 212 +LPEDV F+ L +R L + +L+ Sbjct: 285 LHLDLPEDVAEFIANHLKNNIRQLEGAVKKLN 316 >UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n=5 Tax=Bacteria RepID=B1ZWG9_OPITP Length = 467 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWAREGAGRSHLLHA-ACAELSQRGDA 73 TF +F G N+ + A + Q + ++++ G G++HL+HA A L DA Sbjct: 136 TFETFVVGSNNQMAHAAALAVAQAPAQAYNPLFIYGDTGLGKTHLMHAIGHAILRNNPDA 195 Query: 74 -VGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ +K F E + ++ H+ ++ ID+++ +AG E + F Sbjct: 196 RVAYLSTEK---FTNEFIQALQENSLTKFRQRYRHVDVLLIDDVQFLAGKERIQEEFFHT 252 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + ESGK +++++ DR ++ L SR +WG +Q E +L L+ +A Sbjct: 253 FNDLFESGK-QVVLSSDRRASEIQKLESRLVSRFEWGLPADIQAPDFETRLAILRSKAAC 311 Query: 181 RGFELPEDVGRFLLKRLDREMRTL 204 F+LP + F+ + + + +R L Sbjct: 312 MKFDLPAPILNFIAQNISKNIRRL 335 >UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n=1 Tax=Elusimicrobium minutum Pei191 RepID=DNAA_ELUMP Length = 452 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 19/246 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLL----AALQNVLRQEHSGYIYLWAREGAGRS 57 N A++ P L + TF F G ++ A+ L + + + +++ G G++ Sbjct: 101 NYNAKIPFPSRLNPNYTFEGFIEGPSNRFAYRAAEAVVKKLGERENNPLVIYSTPGLGKT 160 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME----------HLSLVC--IDNIE 105 HLLHA + + + + FV E ++ ++ H SL C +D+I+ Sbjct: 161 HLLHAIGNRILKENPYAKILYMSGEE-FVSEYIESLQNRNPEAFRKKHRSLDCFLMDDIQ 219 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 +AG E F +N + ES K ++++T DR P+QL + P L+SRL G + +++ Sbjct: 220 FVAGKESSVQEFFYTFNALFES-KKQIVLTSDRTPQQLGID-PRLSSRLLSGIVSEIKRP 277 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L+ + F++ +DV F+ + + +R L L +L TIP Sbjct: 278 DLETRIAILRQKRDTSNFDVGDDVIAFIAEGVQASIRELEGCLFRLTTYCNIHGVTPTIP 337 Query: 226 FVKEIL 231 +E+L Sbjct: 338 IAREVL 343 >UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=D1ADA0_THECD Length = 721 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 14/171 (8%) Query: 46 IYLWAREGAGRSHLLHAACAELSQR---GDAVGYVPLDKRTW-FVPEVLDG-MEH----- 95 ++++ G G++HLLHA +Q G V YV ++ T F+ + DG +H Sbjct: 416 LFIYGDSGLGKTHLLHA-IGHYAQSLFSGVRVRYVSSEEFTNDFINAIRDGKADHFRRRY 474 Query: 96 --LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + ++ +D+I+ + G E + F +N L + +++I+ DRPP+ L L +R Sbjct: 475 RDIDILLVDDIQFLEGKEQTQEEFFHTFN-TLHNASKQIVISSDRPPKDLVTLEDRLRNR 533 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +WG +QP E ++ LQ +AR G +P+DV F+ ++ +R L Sbjct: 534 FEWGLTTDVQPPELETRIAILQKKARQEGLAVPQDVVEFIASQIATNIREL 584 >UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3G6_GEMAT Length = 472 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 99/200 (49%), Gaps = 14/200 (7%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDA--VGYVPLDKRT-WFVPEVLDG--------ME 94 ++++ G G++HL+ EL +R + YV ++ T F+ + G Sbjct: 153 LFIYGETGLGKTHLMQGIAHELLRRTPTLRLAYVGTEQFTNEFIGAIQAGAMGDFRRRFR 212 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + L+ +D+++ + G E + F +N I E+G+ ++++T DRPP+++ L SR Sbjct: 213 EIDLLLVDDVQFLKGKESTQEEFFHTFNAIYEAGR-QIVLTSDRPPKEIPGLESRLVSRF 271 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFEL--PEDVGRFLLKRLDREMRTLFMTLDQLD 212 +WG + + E ++ L+ +A L EL P++V F+ + + +R L ++ +L Sbjct: 272 EWGMVANIDSPDLEHRIAILKKKASLDHLELTIPDEVIEFIAQHVKSSVRELEGSIIKLL 331 Query: 213 RASITAQRKLTIPFVKEILK 232 + R +++ +E L+ Sbjct: 332 AYASLKHRDISVDLAREALR 351 >UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n=17 Tax=Acinetobacter RepID=DNAA_ACIBS Length = 465 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 16/230 (6%) Query: 18 TFASFWPGDNSSLLA-ALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELSQRGDA 73 TF+ F G ++ + A + VL Q ++L+ G G++HL+ A L Q Sbjct: 134 TFSLFVEGRSNQMAAETCRKVLTQLGASQHNPLFLYGPTGLGKTHLMQAVGNALLQAKPN 193 Query: 74 VGYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 + + ++ V E L L+ +D+I +AG E + F +N Sbjct: 194 ARVMYMTSESFVQDFVSSLQKGKVEEFKKNCRSLDLLLVDDIHLLAGKEASLVEFFYTFN 253 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 +L+ K ++++T DR P++L P L SR WG ++P E +++ L +A G Sbjct: 254 ALLDESK-QIILTSDRYPKELTELDPRLVSRFSWGLSVGVEPPDIETRIEILLKKAENSG 312 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +LP + F+ +++ +R L L+++ S + + V+E LK Sbjct: 313 VDLPRNCALFIAQQVVANVRELEGALNKVVAISRFKGAPIDLDVVRESLK 362 >UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHT5_SORC5 Length = 471 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 26/238 (10%) Query: 13 LPDD----ETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACA 65 +PDD TFASF G ++ L A +++ G G++HL+HA Sbjct: 130 MPDDLNPKHTFASFVVGPSNQLAHAAAIAAAGGGGRRYNPLFICGGTGLGKTHLMHAIAH 189 Query: 66 ELSQ-RGDA-VGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGD 110 + + R DA + YV +K F + + ++H ++ +D+I+ +AG Sbjct: 190 RVFEGRPDARIIYVSAEK---FTNDFITAIQHHRMDEFRTRYRSSCDVLLVDDIQFLAGR 246 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F +N L + ++++T D+ P+ L L SR WG + +Q E + Sbjct: 247 EQTQEEFFHTFN-ALHTLDRQIVVTSDKYPQNLERMEERLVSRFSWGLVADIQVPELETR 305 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 + ++ +A L G L +DV +L + + +R L TL +L S R + +PF + Sbjct: 306 VAIVRNKAALEGIALTDDVALYLAQMVRSNVRELEGTLIRLAAKSSLTGRPVDLPFAR 363 >UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n=8 Tax=Corynebacterium RepID=DNAA_CORA7 Length = 546 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 26/218 (11%) Query: 10 PLYLPDDE-------TFASFWPGD-----NSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 P + P+ E TF +F G N + +A +N R + +++W G G++ Sbjct: 196 PAHNPNREKSLNPKHTFENFVIGSSNRFANGAAVAVAENPARAYNP--LFIWGGSGLGKT 253 Query: 58 HLLHAAC--AELSQRGDAVGYVPLDKRTW-FVPEVLDGME--------HLSLVCIDNIEC 106 HLLHAA A++ G V YV ++ T ++ + D + +L ++ +D+I+ Sbjct: 254 HLLHAAGNYAQVLHPGLRVKYVSSEEFTNDYINSLRDDRQESFKRRYRNLDILMVDDIQF 313 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 + G E + F +N + ++ K +++++ DRPP+QL L +R + G I +QP Sbjct: 314 LEGKESTQEEFFHTFNALHQANK-QIILSSDRPPKQLTTLEDRLRTRFEGGLITDIQPPD 372 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 E ++ L +A G ++ V + R + +R L Sbjct: 373 LETRIAILMKKASADGTDVDRSVLELIASRFESSIREL 410 >UniRef50_A0LA20 Regulatory inactivation of DnaA Hda protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA20_MAGSM Length = 247 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 15/202 (7%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTW--------------FVPEVLD 91 + L GAG++HLL AA A + + V LD T + +D Sbjct: 47 LILTGAAGAGKTHLLQAAVASVRAQYGEHAAVYLDLATLSKHLENQPKAHSEALLSRFID 106 Query: 92 GMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 L ID +E + + + LYNR+ +G LL G P ++ DL Sbjct: 107 RYGSCRLAAIDELELLEHAVGLQEGVLYLYNRLRVAGG-HLLGAGREDPSTMSGLRDDLR 165 Query: 152 SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 SRL WG + + + Q + A R L E V FLL RL R + T+ +L Sbjct: 166 SRLLWGPVLHIDEPDEVALGQIMDKMAADRQLRLSEAVRHFLLLRLPRSVPVFAQTIQRL 225 Query: 212 DRASITAQRKLTIPFVKEILKL 233 D ++ QR LT+P KE+L L Sbjct: 226 DEEALRQQRALTVPLAKEVLGL 247 >UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SK31_9FIRM Length = 471 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 24/241 (9%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWAREGAGRSHLLHAACAEL 67 L D TF +F G N+ A + + +G ++++ G G++HL+ A E+ Sbjct: 131 LTFSDRFTFNNFVKGKNNEFAMAAAEAVAKNPAGTYNPLFIYGNSGLGKTHLMKAIGHEI 190 Query: 68 SQRGDA-VGYVPLDKRTWFVPEVLDGME---------------HLSLVCIDNIECIAGDE 111 + D V Y+ +K F +++D + ++ ++ ID+I+ IAG Sbjct: 191 HKNFDCKVLYLSSEK---FTIDLIDSIRDKNQNSESEFRKKYRNVDVLLIDDIQFIAGKT 247 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N + K +++I+ DRPP+++ L SR + G +QP E ++ Sbjct: 248 ATQEEFFHTFNELYSRNK-QIIISSDRPPKEIKNLEDRLKSRFNMGLTVDIQPPDFETRM 306 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTL-DQLDRASITAQRKLTIPFVKEI 230 LQ + + L +V F+ + +R L L + L + +T+ +VK I Sbjct: 307 AILQDKVKYEPIALSNEVLEFIAMNIKTNIRELEGALINVLAHYKLKQDAPMTVDYVKRI 366 Query: 231 L 231 L Sbjct: 367 L 367 >UniRef50_D1R6Y2 Chromosomal replication initiator protein dnaA n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6Y2_9CHLA Length = 464 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 10/175 (5%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME---------HL 96 IYL+ +EG G++HLL A L ++G + Y + T V + E ++ Sbjct: 158 IYLYGKEGTGKTHLLMATADALRKQGLSAIYTRAETFTEHVVGAIRAGEMSTFRQAYRNI 217 Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 ++ ID++ + + +F +N + SGK +++++ P L L P L SR +W Sbjct: 218 DVLLIDDVHVFSRKGATQEELFHTFNTLHLSGK-QIVLSSHCLPGDLQLIEPRLVSRFEW 276 Query: 157 GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 G + L+ L+ ++K + L +AR + L V ++LL+ + L L+ L Sbjct: 277 GIVLPLESLNIQEKQEMLSRKARAFNYLLNPKVSQYLLETFTSSTKALVKALEAL 331 >UniRef50_UPI0000D54827 hypothetical protein P700755_25226 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54827 Length = 231 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 27/230 (11%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH--SGYIYLWAREGAGRSHLLHAAC 64 L+L L D+ F S P + L A+ + EH SG + L +G+G++HL C Sbjct: 9 LTLKEALQKDDFFIS--PSN----LEAVTLLDNTEHWGSGVLLLVGPKGSGKTHLSLVWC 62 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDE-----LWEMAIFD 119 E + Y+ L+ + E+ G+ H VC++N++ IA E E IF Sbjct: 63 KE-----NDAKYLGLET---ILQEMEKGLAH-DTVCVENLDIIAHAERQKKSKMEEGIFH 113 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL-DWGQIYKLQPLSDEDKLQALQLRA 178 L N I G +LLI+ + P L++GL DL SRL + + Y P D+ + AL L+ Sbjct: 114 LINNIGSRG-GKLLISSSKMPDALSIGLKDLESRLQSFSKTYIKDP--DDSLVMALLLKY 170 Query: 179 -RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 R + ++ R+ R +++ ++ +D S+ +KLT PF+ Sbjct: 171 FNDRQIHVKHSNLTYIANRIKRTYSSIYKFVNYVDHKSLALNKKLTRPFI 220 >UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 Tax=Desulfuromonadales RepID=Q39XN5_GEOMG Length = 243 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 12/199 (6%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGD-----AVGYVPLDKR------TWFVPEVLDGME 94 +YL G+G++HLL A A S R + + +D+ V ++ + Sbjct: 44 LYLHGPSGSGKTHLLMAIGAHFSARAGLSSVPCISFKDVDEVYGGEYPAEAVSKLAERFR 103 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + + +D++ I + + ++ L+N ++G+ + ITG PP++L L SRL Sbjct: 104 NAPALLVDDLHLIPDQQAVRVELWQLFNDFYQAGRP-IAITGLYPPKELPTIDDHLISRL 162 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 WG + ++ D+ + ++ A R LP DV +LL + R++ +L LD + R Sbjct: 163 LWGLVARVDISDDDSRRLIMKKLADDRQIVLPADVIDYLLLHVRRDVPSLIEALDAISRY 222 Query: 215 SITAQRKLTIPFVKEILKL 233 ++ A+RK+++ +E L Sbjct: 223 ALAAKRKVSVRLAREALAF 241 >UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n=16 Tax=Bacteria RepID=DNAA_DEIDV Length = 459 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 29/212 (13%) Query: 46 IYLWAREGAGRSHLLHAACAELSQR---------------GDAVGYVPLDKRTWFVPEVL 90 ++++ G G++HL+HA +++R + + + DK T F Sbjct: 153 LFIYGDVGLGKTHLMHAVGHYIAERFPEKRIEYVSTETFTNELINAIREDKTTQF----R 208 Query: 91 DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 + + L+ +D+I+ +AG E + F +N + E+ K +++++ DRPP+ + L Sbjct: 209 NRYRSVDLLLVDDIQFLAGKERTQEEFFHTFNALYENHK-QIILSSDRPPKDIQTLEGRL 267 Query: 151 ASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL------ 204 SR +WG I +Q E ++ L++ A ++P++V + +++ +R L Sbjct: 268 RSRFEWGLITDIQSPEFETRVAILKMNAEHNRIDIPQEVLELIARQVTTNIRELEGALMR 327 Query: 205 ---FMTLDQLDRASITAQRKLTIPFVKEILKL 233 F +L+ + + A + L+ F + +K+ Sbjct: 328 VVAFSSLNNVPFSRAVASKALSNVFAPQEVKV 359 >UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=DNAA_CORJK Length = 583 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 12/170 (7%) Query: 46 IYLWAREGAGRSHLLHA--ACAELSQRGDAVGYVPLDKRTW-FVPEVLDGME-------- 94 +++W G G++HLLHA A+ Q V YV ++ T F+ + + Sbjct: 279 LFIWGESGLGKTHLLHAIGHYAKELQPNMRVKYVSSEELTNDFINSIANDTRESFKRRYR 338 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 +L ++ +D+I+ + E + F +N + ++ K +++++ DRPPRQL L +R Sbjct: 339 NLDMLIVDDIQFLQNKESTQEEFFHTFNALHQANK-QIVLSSDRPPRQLTTLEDRLRTRF 397 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 + G I +Q E ++ L +A +LPEDV + R ++ +R L Sbjct: 398 EGGLITDVQTPDLETRIAILTKKAESDNVQLPEDVKVLIASRYEKSIREL 447 >UniRef50_C7H083 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H083_9FIRM Length = 455 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 24/234 (10%) Query: 18 TFASFWPGDNSSLLAALQ-NVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR--GD 72 TF +F GDN+ A+ ++ E S Y +L+ G G++HL+HA + + Sbjct: 123 TFDNFVVGDNNRHAHAVALSIANSEISEYNPFFLYGGPGLGKTHLMHAIGMTIMKNFPYK 182 Query: 73 AVGYVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIECIAGDELWEMAIFDL 120 V YVP + F ++++ + S ++ ID+I+ + G E + F Sbjct: 183 KVLYVPAE---TFTTDLINSIRKSSQEEFKNKYRMVDVLLIDDIQFMQGKESTQEEFFHT 239 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + GK +++I+ DR P LN L SR ++P + E ++ LQ + + Sbjct: 240 FNSLTRLGK-QIVISSDRSPNHLNKLDERLRSRFMQNVTTDIKPANFETRVAILQKKCEI 298 Query: 181 RGFELP---EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 FE+ +V + +D +R L L +L S K+TI + K+ L Sbjct: 299 ENFEVDANLNEVINLIAHNIDNNIRALEGALTKLISFSRLLNEKITIDYAKKNL 352 >UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n=5 Tax=Rhodobacteraceae RepID=DNAA_JANSC Length = 475 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 20/233 (8%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TFA+F G + L AA + V + ++L+ G G++HL+HA +L R Sbjct: 140 TFANFVVGKPNELAHAAARRVAETLDVTFNPLFLYGGVGLGKTHLMHAIAWDLQDRHPDA 199 Query: 75 GYVPLDKRTW---FVP--------EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + L + FV + + ++ +D+++ IAG + F +N Sbjct: 200 KILFLSAEQFMHRFVRALREQDTFNFKETFRSVDILMVDDVQFIAGKTSTQQEFFHTFNA 259 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 ++E GK +++I+GDR P + +ASRL G + + P E +L LQ +A L G Sbjct: 260 LVEMGK-QIVISGDRAPVDMEELDNRIASRLQCGLVVDIHPTDYELRLGVLQHKAELLGA 318 Query: 184 ELPE-----DVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + P V +L +++ +R L L +L + +R++T+ KE L Sbjct: 319 KYPHITFATGVLEYLAQKISSNVRVLEGALTRLFAFADLVRREVTVDLAKECL 371 >UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_MICLC Length = 515 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 22/203 (10%) Query: 46 IYLWAREGAGRSHLLHAACAELSQR---GDAVGYVPLDKRTWFVPEVLDGMEH------- 95 ++++ G G++HLLHA ++R G V YV ++ F + ++ + H Sbjct: 210 LFIYGESGLGKTHLLHA-IGHYARRLYPGLRVRYVNSEE---FTNDFINSIRHDEGASFK 265 Query: 96 -----LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD- 149 + ++ ID+I+ +A E F +N + + K +++IT D PP+QL+ G D Sbjct: 266 QVYRNVDILLIDDIQFLADKEATVEEFFHTFNTLYNNNK-QVVITSDLPPKQLS-GFEDR 323 Query: 150 LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLD 209 L SR +WG I +QP E ++ L+ +A G P + ++ R+ +R L L Sbjct: 324 LRSRFEWGLITDIQPPDLETRIAILRKKAEAEGLVAPPEALEYIASRISTNIRELEGALI 383 Query: 210 QLDRASITAQRKLTIPFVKEILK 232 ++ + ++ + I + +LK Sbjct: 384 RVTAFASLNRQTVDIELAEHVLK 406 >UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n=2 Tax=Octadecabacter antarcticus RepID=B5JZC6_9RHOB Length = 454 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 25/240 (10%) Query: 14 PDDE-TFASFWPGDNSSLLAALQNVLRQEHSGYI-----YLWAREGAGRSHLLHAACAEL 67 PD TF SF G + L A R G + +L+ G G++HL+HA EL Sbjct: 114 PDQRFTFDSFVVGKPNELAHAASK--RVAEGGPVTFNPLFLYGGVGLGKTHLMHAIAHEL 171 Query: 68 SQRGD--AVGYVPLDKRTW-FVP-----EVLDGMEH---LSLVCIDNIECIAGDELWEMA 116 +R V YV D+ + F+ +++D +H + ++ +D+I+ + G E + Sbjct: 172 GERRPDLNVLYVSADQFIYRFISALRDRKMMDFKQHFRSVDVLMVDDIQFLEGKESTQEE 231 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F YN + + GK +++I+ DR P ++ + SRL G + L P E +L L Sbjct: 232 FFHTYNALADQGK-QMIISADRAPGEIRDLSERIKSRLQCGLVVDLHPTDYELRLGILHA 290 Query: 177 RARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + + G E+ V FL R+ +R L L++L + R +T+ ++ L Sbjct: 291 KQEMFVNVYPGVEIATGVLEFLAHRISSNVRVLEGALNRLYALASMVGRTVTVEMAQDCL 350 >UniRef50_Q0FEK0 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FEK0_9RHOB Length = 231 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 3/136 (2%) Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 S +C++ E IAG++ E F L+N ESG LLITG P NL LPDL SR+ Sbjct: 86 SALCLEGFEVIAGNQELEAHAFHLHNLAQESG-APLLITGCSTPSTWNLLLPDLLSRIQG 144 Query: 157 GQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 + +LQ D+ L A+ ++ R + V +LLKR++R ++ +++LD+ + Sbjct: 145 TSVAQLQS-PDDVLLNAVLIKQFNDRQIAIDPKVVTYLLKRMERSFASISYLVNELDKGA 203 Query: 216 ITAQRKLTIPFVKEIL 231 + + ++I + +L Sbjct: 204 LKVGKPISIKLARNVL 219 >UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n=258 Tax=Bacteria RepID=DNAA_EXIS2 Length = 464 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 13 LPDDETFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 L + TF +F G N AA V Y ++++ G G++HL+HA + Sbjct: 127 LNEKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGQYVQD 186 Query: 70 R--GDAVGYVPLDKRTW-FVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIF 118 + G + YV ++ T F+ + D ++ ++ ID+I+ +AG E + F Sbjct: 187 QKLGTKIAYVSSEQFTNDFINSIRDNKTVQFRNKYRNIDVLLIDDIQFLAGKEQTQEEFF 246 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N L + + +++I+ DRPP+++ L SR +WG I + P E ++ L+ +A Sbjct: 247 HTFN-ALHNDQKQIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKA 305 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTL 204 ++ +V ++ ++D +R L Sbjct: 306 NAEQLDVSNEVMLYIASQIDTNIREL 331 >UniRef50_A3PMH2 Chromosomal replication initiator, DnaA n=7 Tax=Rhodobacterales RepID=A3PMH2_RHOS1 Length = 226 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Query: 44 GYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN 103 G + L G+G++HL H A+ R +P + L + V +++ Sbjct: 42 GKMVLVGPRGSGKTHLAHIWAAQAEAR-----LIPAEA---LARADLPALAADGAVAVED 93 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 E + GD E A+F L+N +LE LLIT PPR LGLPDL SR+ + +L+ Sbjct: 94 AERLGGDRAAEEALFHLHNLMLERAGA-LLITAAGPPRDWGLGLPDLKSRMQAASVTRLE 152 Query: 164 PLSDEDKLQALQLRARL-RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 D+ L A+ ++ R +P + +L+ R+DR + LD S+ +R + Sbjct: 153 A-PDDALLSAMLVKLFTDRQIAVPGMLVPWLVARMDRSCEAARALVAALDARSLAERRPI 211 Query: 223 TIPFVKEILKL 233 + E+L L Sbjct: 212 SRQMAAELLGL 222 >UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n=3 Tax=Psychrobacter RepID=Q1QEW6_PSYCK Length = 481 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 14/234 (5%) Query: 12 YLPDDETFASFWPGDNSSLL--AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAEL 67 YL D TF +F G +++L A + RQ + + ++++ G G++HL+H+ Sbjct: 145 YLNPDFTFETFVTGKSNNLAYKACYELGKRQSKNRHNPLFIYGPSGLGKTHLMHSVAHRY 204 Query: 68 SQRGDAVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + Y +K R + + ++ + L+ +D+I +AG Sbjct: 205 LKNNQNFYYFTSEKFINQLVYSLRNNKIEDFKKKIKKVDLLIVDDIHVLAGKTKSSNEFL 264 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L+ SG +L++ DR P Q+ SR WG + P + ++Q LQ +A Sbjct: 265 TLFAD-FTSGDKQLILASDRHPSQMTEFDERFRSRFSWGLTVAVDPPEIDTRVQILQRKA 323 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP++ F+ + + +R L L+Q+ + +T+ V+ LK Sbjct: 324 ASYGMSLPKECALFIAQNVVSNVRRLEGALNQVFANANLTGAPITLEMVQYALK 377 >UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n=2 Tax=Veillonellaceae RepID=C9KQB2_9FIRM Length = 490 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 23/233 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGDA 73 TF +F G +S+ A + E G +Y ++ G G++HL+HA + Q Sbjct: 158 TFETFVTG-SSNRFAHAAAMAVAESPGKVYNPFFMYGGVGLGKTHLMHAIGNRVLQNHPE 216 Query: 74 --VGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFD 119 V YV ++ F E++ ++ + ++ +D+I+ ++G + + F+ Sbjct: 217 MRVLYVSSEQ---FTNEIIRAIQEGKAELFRQKYRTIDVLMVDDIQFLSGKQSTQEEFFN 273 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N L +++++ DRPPR++ L SR + G I +Q E ++ L+ +A Sbjct: 274 TFN-ALHVADKQIILSSDRPPREVQKLEDRLRSRFEGGLITDIQAPDLETRIAILKNKAL 332 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L ++P DV F+ R+D +R L L ++ + + +T V E LK Sbjct: 333 LDHVDVPNDVLMFIANRIDSNIRELEGALTRVVAYASLINKPVTTDVVAEALK 385 >UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n=3 Tax=Mobiluncus RepID=C2KT33_9ACTO Length = 533 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 28/242 (11%) Query: 10 PLYLPDDETFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAA--- 63 P+Y TF SF G NS AA ++V+ Y ++++ G G++HLLHA Sbjct: 192 PMY-----TFESFVIGSSNSFTAAAAESVVVSPAQAYNPLFIYGGSGLGKTHLLHAIGNY 246 Query: 64 CAELSQRGDAVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 EL + V YV ++ T PE+ + + ID+I+ + G E Sbjct: 247 ALELYPQAK-VRYVSSEEFTNDFINAIATQTFPELQAKYREVDFLLIDDIQFLQGKEQTL 305 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N L + + +++IT D PP++L + SRL+WG + +QP + E ++ L Sbjct: 306 EEFFHTFN-TLHTARKQVVITSDVPPKELKSFEERIKSRLEWGLLTDIQPPNLETRIAIL 364 Query: 175 QLRA---RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR-ASITAQRKLTIPFVKEI 230 + ++ L+G++ + V ++ + +R L L ++ A+++ +++ KEI Sbjct: 365 RRKSAQENLQGYD--DAVLEYIASNISSNIRELEGALLRVTAYAALSGGGSVSLDTAKEI 422 Query: 231 LK 232 L+ Sbjct: 423 LR 424 >UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n=10 Tax=Chlorobiaceae RepID=DNAA_CHLTE Length = 493 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 18/231 (7%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHA-ACAELSQR-G 71 TF++ GD +SL A + Q + ++ G G++H++ A + L R Sbjct: 159 TFSTLVRGDCNSLAFAASKSIAQNPGQNAFNPLVIYGGVGLGKTHMMQAIGNSVLENRIT 218 Query: 72 DAVGYVPLDKRTW-FVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 DAV YV +K FV + +G ++ ++ ID+I+ AG E + IF ++N Sbjct: 219 DAVLYVSSEKFAIDFVNAIQNGNIQEFSAFYRNIDVLIIDDIQFFAGKEKTQEEIFHIFN 278 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 + +S K +++++ DRP +++ G+ D L SR +WG +Q E + +Q + + Sbjct: 279 TLHQSNK-QIILSADRPIKEIK-GIEDRLISRFNWGLSTDIQAPDYETRKAIIQSKLKQS 336 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G L V F+ + +R L + +L A +++ + F K LK Sbjct: 337 GVSLDPVVIEFIATNVTSNVRELEGCIVKLLAAHSLDNQEIDLQFAKSTLK 387 >UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n=5 Tax=Anaerococcus RepID=C7REZ5_ANAPD Length = 459 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 20/211 (9%) Query: 13 LPDDETFASFWPGDNSSLL-----AALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 L ++ FA+F G ++ A +N+ + + ++++ G G++HL+ A Sbjct: 119 LEEENIFANFVEGKSNQYALGVSQAVAENISNKSQARLYNPLFIYGESGLGKTHLMQAIA 178 Query: 65 AE-LSQRGDA-VGYVPLDKRTWFVPEVLDGMEH---------LSLVCIDNIECIAGDELW 113 E L R DA V Y+ +K T + L ++ + ++ ID+I+ IAG E Sbjct: 179 HEILDNRDDAYVMYLSSEKFTNEMISALRSTKNEKFREKYRSVDILLIDDIQFIAGKEGT 238 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F +N + +GK +++I+ DRPP+++ L SR WG I + E ++ Sbjct: 239 QEEFFHTFNDLYNTGK-QIVISSDRPPKEIKHLENRLISRFSWGIIVDIGKPDFETRVAI 297 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 LQ + G + ++ ++ + +D +R L Sbjct: 298 LQKKLDQLGAYIDNNILFYIAENIDTNIRDL 328 >UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n=7 Tax=Betaproteobacteria RepID=DNAA_BORA1 Length = 483 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 24/239 (10%) Query: 13 LPDDETFASFWPGDNSSLL--AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELS 68 L D TF +F G + L AALQ V + Y ++L+ G G++HL+HA + Sbjct: 147 LNTDLTFENFVTGKANQLARAAALQ-VAENPGTSYNPLFLYGGVGLGKTHLIHAIGNAMV 205 Query: 69 QRGDAVG--YVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWE 114 G V YV D+ +V +V+ + L L+ ID+I+ +G + Sbjct: 206 AAGTGVRVRYVHADQ---YVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKNRTQ 262 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F + ++ K +++IT D P++L+ L SR D G ++P E ++ L Sbjct: 263 EEFFYAFEAMVAQRK-QIIITSDTYPKELSGIDSRLISRFDSGLTVAIEPPELEMRVAIL 321 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ-LDRASITAQRKLTIPFVKEILK 232 +A G +PE+V F+ K L +R L L + L A + L + KE LK Sbjct: 322 LRKAESEGVPMPEEVAFFIAKHLRSNVRELEGALRKVLAYARFHGREALNVDVCKEALK 380 >UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n=3 Tax=Clostridiales RepID=DNAA_CLOPH Length = 453 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 112/240 (46%), Gaps = 23/240 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELS 68 YL TF +F G N++L A + + E ++++ G G++HL+H+ + Sbjct: 112 YLNPRYTFDTFVVGANNNLAHAASLAVAESPAEIYNPLFIYGGVGLGKTHLMHSIAHYIL 171 Query: 69 QRG--DAVGYVPLDKRTWFVPEVLDGMEH--------------LSLVCIDNIECIAGDEL 112 ++ V YV +K F E+++ + + + ++ ID+I+ I G E Sbjct: 172 EQNPNSKVLYVTSEK---FTNELIESIRNADTTPTEFREKYRNIDVLLIDDIQFIIGKER 228 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + ES K +++I+ D+PP+ + L SR +WG +Q E ++ Sbjct: 229 TQEEFFHTFNTLHESKK-QIIISSDKPPKDILTLEERLRSRFEWGLTVDIQSPDYETRMA 287 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+ + L + ++V +++ + +R L L ++ S ++++ + +E LK Sbjct: 288 ILKKKEELDCLTIDDEVMKYIASNIKSNIRELEGALTKIVALSRLKKKEVDVILAEEALK 347 >UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEM2_PETMO Length = 454 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 24/224 (10%) Query: 1 MNTPAQLSLPLYLPD---DETFASFWPGDNSSL--LAALQNVLRQEHSGYIYLWAREGAG 55 +N P + PL L + + TF SF G+++ + +AL+ ++++ G G Sbjct: 86 VNGPIIKNRPLKLSEFNPEFTFDSFVTGNSNRIAYYSALEVCKNPGKYNPLFIYGDVGLG 145 Query: 56 RSHLLHAACAELSQRGD--AVGYVPLDKRTWFVPEVLDGM-------------EHLSLVC 100 ++HLLHA L + V YV + F+ +++DG+ ++ + Sbjct: 146 KTHLLHAIGNFLMENAPDLKVKYVTAED---FMNQMMDGIRASDMENFRERFRRNVDFLL 202 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ID+++ + G + +F +N + S K +++I DR P +L P L SR + G I Sbjct: 203 IDDVQFLIGKNTVQSELFHTFNSLFNSRK-QIVICSDRTPDELATFHPRLISRFEMGLIT 261 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +Q K + A++ +L +DV +L + +D +R L Sbjct: 262 DIQAPDKATKYLIAKKMAQMISLQLTDDVAYYLAEHVDTNLRKL 305 >UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3S7_9DELT Length = 453 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 13/156 (8%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTW---FVPEVLDGM--------- 93 ++++ G G++HLLH EL ++ ++ V L + FV V + Sbjct: 154 LFIYGGVGLGKTHLLHGIGHELHRKDPSLRIVYLSAEHFMNEFVTAVRNNQFDEFRARYR 213 Query: 94 EHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + + ID+I+ IAG + F ++N + E+GK ++++T DR P + L SR Sbjct: 214 KDCDCLLIDDIQFIAGRDRTMDEFFHVFNALYEAGK-QIVVTSDRVPADMPGMEARLTSR 272 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDV 189 L+WG + +QP E ++ +Q +A G ELP +V Sbjct: 273 LNWGLVADVQPPDLETRIAIVQAKAERDGMELPAEV 308 >UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n=13 Tax=Rickettsiaceae RepID=DNAA_WOLPM Length = 460 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 14/201 (6%) Query: 43 SGYIYLWAREGAGRSHLLHAACAELSQRGDA---VGYVPLDKRTWFVPEVL--------- 90 S ++L+ G G++HL+HA + A V Y+ +K + L Sbjct: 159 SNPLFLYGGVGLGKTHLMHAIAWHIVNSPSAKRKVVYLSAEKFMYQYITALRSKDIMLFK 218 Query: 91 DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 + + ++ +D+++ I+G + + F +N +++ K +L+I+ DR P L+ + Sbjct: 219 EQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNALIDQNK-QLVISADRSPSDLDGVEERI 277 Query: 151 ASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ 210 SRL WG + + + E +L LQ + +P+DV FL + + +R L L++ Sbjct: 278 KSRLGWGLVADINETTFELRLGILQAKVEQMNMYVPKDVLEFLARNIKSNIRELEGALNK 337 Query: 211 LDRASITAQRKLTIPFVKEIL 231 + S+ R +T+ E L Sbjct: 338 VTHTSLIG-RSMTVESASETL 357 >UniRef50_UPI000185BFFA chromosomal replication initiator protein DnaA n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BFFA Length = 582 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 20/247 (8%) Query: 3 TPAQLSLPLYLPD---DETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAG 55 TP ++S+P P + TF +F G + AA V E G Y + G G Sbjct: 230 TPTEMSMPFEEPTLNPNYTFETFVIGPQNKFAAAAA-VAVAESPGRTYNPLFISGGSGLG 288 Query: 56 RSHLLHA--ACAELSQRGDAVGYVPLDKRTW-FVPEVLDGMEH--------LSLVCIDNI 104 ++HLLH A+ V YV ++ T F+ V D + L ++ ID+I Sbjct: 289 KTHLLHGIGHYAKHLYPNLRVRYVSSEEFTNDFINSVRDDAQESFKRRYRDLDMLIIDDI 348 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + + G E + F +N + +S +++++ DRPPR+L L +R WG LQ Sbjct: 349 QFLEGKEGTQEEFFHTFNALHQSNH-QIVLSSDRPPRELKTLEDRLRTRFQWGLNPDLQY 407 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E ++ L +A+L +P +V +++ + +R L L Q+ + +T+ Sbjct: 408 PDLETRIAILSKKAQLSDLAVPHNVLQYIAENTSSSIRELEGRLLQISAHASMIHEPVTL 467 Query: 225 PFVKEIL 231 F +EIL Sbjct: 468 KFAQEIL 474 >UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n=38 Tax=Bacteria RepID=DNAA_STRGG Length = 622 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 12/170 (7%) Query: 46 IYLWAREGAGRSHLLHA--ACAELSQRGDAVGYVPLDKRT-WFVPEVLDG--------ME 94 ++++ G G++HLLHA A G V YV ++ T F+ + DG Sbjct: 319 LFIYGESGLGKTHLLHAIGHYARSLYPGTRVRYVSSEEFTNEFINSIRDGKGDTFRKRYR 378 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + ++ +D+I+ +A E + F +N L + +++++ DRPP+QL L +R Sbjct: 379 DVDILLVDDIQFLASKESTQEEFFHTFN-TLHNANKQIVLSSDRPPKQLVTLEDRLRNRF 437 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +WG +QP E ++ L+ +A P +V F+ R+ R +R L Sbjct: 438 EWGLTTDVQPPELETRIAILRKKAVQEQLNAPPEVLEFIASRISRNIREL 487 >UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=A8LVG8_SALAI Length = 591 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 12/198 (6%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDA--VGYVPLDKRTW-FVPEVLDGMEH------- 95 ++++ G G++HLLHA + G+A V YV ++ T F+ + D Sbjct: 289 LFIYGSSGLGKTHLLHAIGHYATTLGNAHSVRYVSTEEFTNDFINSLRDDKTSAFQRRYR 348 Query: 96 -LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + ++ ID+I+ + E + F +N L + +++IT DR P+QL L +R Sbjct: 349 DVDILLIDDIQFLENRERTQEEFFHTFN-TLHNANKQIVITSDRSPKQLATLEDRLRTRF 407 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 +WG + +QP E ++ LQ +A P DV F+ R+ +R L L ++ Sbjct: 408 EWGLLADIQPPDLETRIAILQKKAAQERLFAPPDVLEFIASRVSNSIRELEGALIRVTAF 467 Query: 215 SITAQRKLTIPFVKEILK 232 + + + + +E+L+ Sbjct: 468 ASLTRSSVELSLAEEVLR 485 >UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n=7 Tax=Bacteria RepID=DNAA_ROSS1 Length = 481 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 17/209 (8%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF F G ++ L AA V Y ++L+ G G++HLLHA + R V Sbjct: 147 TFDRFIIGPSNRLANAACMAVAEHPAQAYNPLFLYGGVGLGKTHLLHAIGNFVLDRDPEV 206 Query: 75 GYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDLYN 122 + + T F ++++ + ++ ++ ID+I+ IAG E + F +N Sbjct: 207 NVLYVSSET-FTNDLINSIRRQQTEEFRIRYRNIDILLIDDIQFIAGKEQTQEEFFHTFN 265 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + +GK +++I+ DR P+ + L SR +WG I +Q E + L+ +A Sbjct: 266 TLHSAGK-QIVISSDRSPKAILTLEERLRSRFEWGLIVDVQMPDLETRTAILRAKAEQSP 324 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQL 211 +P+ V FL +R+ +R L L+++ Sbjct: 325 VPVPQPVIDFLAQRIQSHIRELEGCLNRV 353 >UniRef50_B2V628 Chromosomal replication initiator protein dnaA n=5 Tax=Aquificales RepID=B2V628_SULSY Length = 459 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 21/232 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLR-QEHSGYIY----LWAREGAGRSHLLHAACAELSQRGD 72 TF + G+N+ + A Q L E+ G IY ++ G G++HLLH + + Sbjct: 127 TFDNLIVGNNNKV--AFQACLAVTENLGKIYNPLFIYGDVGLGKTHLLHGTAYHVLAKSS 184 Query: 73 AVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAGDELWEMAIFDL 120 + + T F E+ +E + L+ ID+I+ + G E ++ + + Sbjct: 185 SAKIIYTTADT-FASELFSYLEKGMILEFRKKYREVDLLLIDDIQFLVGKERTQIEFYHI 243 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + GK +++++ D+PP +LN L SR G I ++ E K+ + + Sbjct: 244 FNVLYSLGK-QIILSSDQPPSKLNGIEKRLISRFSSGLIVEITKPDLETKINITLKKMKE 302 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 E DV F+ K ++ +R L ++ +L S R +T+ + +LK Sbjct: 303 LNVEFSRDVVLFIAKTVNTSVRELEGSIKRLKAYSEIMGRPITLDVARTVLK 354 >UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n=28 Tax=cellular organisms RepID=DNAA_NITEC Length = 459 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 25/249 (10%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSH 58 T A+ + P L TF +F G ++ LA + E G Y ++ G G++H Sbjct: 114 TTARKTNPSRLNPAFTFDAFVTG-KANQLARAGAIQVAERPGIAYNPLFIYGGVGLGKTH 172 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNI 104 L+HA + + G + YV +K +V +V+ +H L L+ +D++ Sbjct: 173 LMHAVGNYVMELDAGAKIRYVHAEK---YVSDVVSAYQHKSFDKFKLYYHSLDLLLVDDV 229 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQ 163 + +G + F +N ++E+ K +++IT D P++++ GL + L SR WG ++ Sbjct: 230 QFFSGKNRTQEEFFYAFNALIEAHK-QVIITSDCYPKEIS-GLEERLVSRFGWGLTVAIE 287 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 P E ++ L +A + EL E F+ K + +R L L ++ S ++ Sbjct: 288 PPELEMRVAILLKKAFIEKIELDESTAFFIAKYIRSNVRELEGALKRVLAYSRFTGHPIS 347 Query: 224 IPFVKEILK 232 + KE LK Sbjct: 348 LDLAKEALK 356 >UniRef50_Q6MC93 Chromosomal replication initiator protein dnaA 1 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNAA1_PARUW Length = 451 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME---------HL 96 IYL+ G+G++HLL + L +G V YV + T V + E ++ Sbjct: 149 IYLYGSGGSGKTHLLMSLAHALKAQGLKVIYVRAETFTDHVVTAIRAGEMSVFRQAYRNI 208 Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 ++ +D++ + + F +N + GK ++++ + P+ L L P L SR +W Sbjct: 209 DVLLVDDVHVFSRKGATQEEFFHTFNTLHLEGK-QIILASECSPQDLQLIEPRLVSRFEW 267 Query: 157 GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL----- 211 G + L+PL + L +A+ FELP + +L++ + L L+ L Sbjct: 268 GIVLPLKPLRPGEMRNLLIAKAKALHFELPLKIADYLIETFKSNAKALIKGLEALVLRLH 327 Query: 212 -------DRASITAQRKLTIPFVKE 229 S+TA + L I ++E Sbjct: 328 LDAKHSITALSVTATKALLIDLIEE 352 >UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNAA_METI4 Length = 454 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 16/230 (6%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWAREGAGRSHLLHAACAELSQRGD-- 72 +F +F G NS AA + + + ++L+ + G G++HL+ A + ++ Sbjct: 120 SFENFVVGPNSEFAAAAAKAVAESPAKAYNPLFLYGKVGLGKTHLMQAIGNHIVEKNKWI 179 Query: 73 AVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 V YV ++ T F+ + G + ++ ID+I+ +AG E + F +N Sbjct: 180 LVQYVTSEQFTNEFIEAIQKGSIGQFRKKYRQIDVLLIDDIQFLAGKERSQEEFFHTFNC 239 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + + G +++++GD P L L SR +WG ++ P E +L L+ + + Sbjct: 240 LFD-GSKQIVLSGDEAPSSLQNLEKRLISRFEWGLTAEILPPGIEVRLAILKHKLKNYSL 298 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQL-DRASITAQRKLTIPFVKEILK 232 + E + F+ +R+ +R L L++L ASI + K+T+ + +LK Sbjct: 299 SIDEKILEFIAERIKTNVRQLEGALNRLCAYASIHKEGKITLEETQSLLK 348 >UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n=1 Tax=Bdellovibrio bacteriovorus RepID=DNAA_BDEBA Length = 471 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 25/207 (12%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELSQRGDA 73 TF++F G NS AA NV R + +Y++ G G++HLLHAA + ++ Sbjct: 137 TFSTFVVGKNSEFAHAACYNVARNPGADDYNPLYIYGPVGMGKTHLLHAAGNHIREQYQH 196 Query: 74 --VGYVPLDKRTWFVPEVLDGM-------------EHLSLVCIDNIECIAGDELWEMAIF 118 + Y+ ++ F+ E + + E+ ++ +D+++ IA E + F Sbjct: 197 LRITYISAER---FMNECISAIRRHEMDKFRQKYRENSDILLVDDVQFIARGEAVQEEFF 253 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLA-SRLDWGQIYKLQPLSDEDKLQALQLR 177 N ++S K ++++ DR P+ ++ GL D + +RL+ G I + E ++ L+ + Sbjct: 254 HTVNSFIDSRK-QVILASDRMPKDIH-GLEDRSRTRLERGLIADITMPDLETRIAILRYK 311 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTL 204 A LPEDV ++ + R +R L Sbjct: 312 AEKYNVRLPEDVVNYIARISKRSIREL 338 >UniRef50_D2LBJ7 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBJ7_RHOVA Length = 232 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 3/130 (2%) Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 +E + L E A+F N E G + +L+T PP + LPDL SR+ ++Q Sbjct: 88 LEDVDASALPETALFHHLNLAREHG-SFILLTARTPPGSWRIALPDLRSRIRSYPTAEIQ 146 Query: 164 PLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 P DE+ L AL L+ RG E+ DV +L++R++R M LD+A++ +R++ Sbjct: 147 P-PDEEHLAALLLKHFSDRGIEIAPDVIAYLVQRIERSMAAADAVASLLDKAALAERRRI 205 Query: 223 TIPFVKEILK 232 T F ++LK Sbjct: 206 TRAFAAKVLK 215 >UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NID0_KYTSD Length = 506 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 14/171 (8%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDA---VGYVPLDKRT-WFVPEVLDGMEH------ 95 ++++ G G++HLLHA ++ D+ V YV ++ T F+ V G + Sbjct: 200 LFIYGGSGLGKTHLLHA-IGHYARTLDSSVRVKYVNSEEFTNQFINAVSAGQANAFQRQY 258 Query: 96 --LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + ++ ID+I+ + G E F +N + S K +++IT D+PP++L+ + SR Sbjct: 259 RDVDVLLIDDIQFLQGKEQTMEEFFHTFNTLHNSEK-QIVITSDQPPKKLSGFAERMRSR 317 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +WG + +QP E ++ L+ +A ++P+DV + ++ +R L Sbjct: 318 FEWGLLTDVQPPDLETRIAILRRKAAADKLDIPDDVLHLIASKISSNIREL 368 >UniRef50_A7H675 Chromosomal replication initiator protein dnaA n=4 Tax=Anaeromyxobacter RepID=A7H675_ANADF Length = 460 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 11/196 (5%) Query: 46 IYLWAREGAGRSHLLHA-ACAELSQRGDAVGYVPLDKRTW-FVPEVLDGM--------EH 95 ++L G G++HLLHA A A L ++G V V ++ T FV + G Sbjct: 162 LFLHGDSGLGKTHLLHALAHAILDKQGGRVAIVSSERYTNDFVAALSKGTMDDFRRKYRE 221 Query: 96 LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLD 155 + + +D+++ +AG + F +N L +++++ DR P++L L SR + Sbjct: 222 CTALLVDDVQFLAGKDKTAEEFFHTFNE-LHDHHVQIVLSSDRSPKELKGLDARLCSRFE 280 Query: 156 WGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 WG +++ E + LQ +A + +LP DV + L + +R L L +L + Sbjct: 281 WGMRVQVEAPEFETRAAILQKKAEVESIDLPGDVTQLLAAHIRSNVRELEGALMRLAAFA 340 Query: 216 ITAQRKLTIPFVKEIL 231 +T+ +++L Sbjct: 341 SLKSEPITVALARDVL 356 >UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MB19_9PROT Length = 474 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 23/233 (9%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA- 73 TF +F G + L A V Y ++++ G G++HL+ A + + + Sbjct: 144 TFDNFITGKANQLARAGAIQVAESPGVAYNPLFIYGGVGLGKTHLIQAIGNYVHENNKSA 203 Query: 74 -VGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 + YV +K +V +V+ +H L L+ +D+++ G + F Sbjct: 204 KIRYVHAEK---YVSDVVSAYQHKAFDKFKLYYHSLDLLLVDDVQFFGGKNRTQEEFFYA 260 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N ++E+ K +++IT D P+++ GL + L SR WG ++P E ++ L +A Sbjct: 261 FNALIETHK-QVIITCDTYPKEIT-GLEERLVSRFGWGLTVAVEPPELEMRVAILLKKAE 318 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L E+V F+ K + +R L L ++ S + +T+ KE LK Sbjct: 319 MEKIRLDENVAFFIAKHIRSNVRELEGALKRVLAFSRFVNQDITLDLAKEALK 371 >UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QR5_CYTH3 Length = 471 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 18/199 (9%) Query: 48 LWAREGAGRSHLLHAACAELSQR--GDAVGYVPLDKRTWFVPEVLDGMEH---------- 95 ++ G G++HL+ A ++ + V Y+P ++ F+ + ++ M++ Sbjct: 171 VYGNVGLGKTHLVQAIGNQIKKNHADKKVLYMPSER---FLSQFIEAMKNNQSQEFTNQF 227 Query: 96 --LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 L ++ +D+++ ++G E + F ++N + +SGK +++IT D P+ + L SR Sbjct: 228 LGLDVLILDDVQFLSGKEKTQEIFFHIFNHLHQSGK-QIIITSDCAPKDIKGLQERLLSR 286 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 WG LQ E + + + + G E+ DV +L +D MR L ++ L Sbjct: 287 FKWGLSADLQVPDYETRNAIICKKMQFEGIEIAADVIDYLAYSVDTNMRDLEGVVNSLIA 346 Query: 214 ASITAQRKLTIPFVKEILK 232 + R++ + K+I++ Sbjct: 347 QHTLSGRQIDLELAKQIIQ 365 >UniRef50_Q0FQP8 Putative uncharacterized protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FQP8_9RHOB Length = 233 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 12/232 (5%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 M TP QL LPL + ++ G ++ L AL + + +G + L GAG++HL Sbjct: 1 MITPDQLPLPLPVRAALGREDYFVGQSNGLAVALLDNWQSWPNGKMVLVGPSGAGKTHLA 60 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 H AE VP +P+ + +C+++ + IAGD E A+F L Sbjct: 61 HVWAAETG-----AAIVPAAS----LPQADIPAHATAPICVEDGDRIAGDRPAEEALFHL 111 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N L + LL+T P L +PDL SR++ Q L P D+ L A+ + Sbjct: 112 HNLALAQ-RQPLLVTARSAPSLWPLVIPDLKSRMEGTQTATL-PDPDDTLLAAVIAKMLA 169 Query: 181 RGFELP-EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P DV +L++ + R + LD ++ + +T ++IL Sbjct: 170 DRQCVPAADVIPYLVRHMPRSFAMARALVTALDANAMGRPKGITRSLARDIL 221 >UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQH3_9RICK Length = 462 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 12/158 (7%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQ-EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVG 75 F SF G+++ L +A + V H +Y++ G G++H+L+A +L Q V Sbjct: 128 NFESFVTGESNQLAFSAAKRVTESLGHYNPLYIYGGVGLGKTHILNAIGNQLKQMDKKVI 187 Query: 76 YVPLDKRTW-FVPEVLDGMEH--------LSLVCIDNIECIAGDELWEMAIFDLYNRILE 126 Y+ ++ + FV + + H ++ +D+I+ I+G E+ + F +N +LE Sbjct: 188 YLSAERFMYQFVKSIKNKDTHKFKEIFRNADVLILDDIQFISGKEVTQEEFFYTFNSLLE 247 Query: 127 SGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + +++++I+ DR P +L+ + SRL G + +QP Sbjct: 248 N-QSQVVISCDRSPNELDRIQDRIKSRLSGGLVVDVQP 284 >UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EX07_DICNV Length = 442 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 23/205 (11%) Query: 19 FASFWPG-DNSSLLAALQNV---LRQEHSGYIYLWAREGAGRSHLLHAACAELSQRG--- 71 F +F G N + AA+ V L E + ++ G G+SHL+HAA L Q G Sbjct: 110 FENFIVGKSNDNAYAAVHRVSKGLLSEDFNPLLIYGGTGLGKSHLMHAAGNALCQNGKKR 169 Query: 72 -----------DAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 D + + KR + + ++ + + ID+++ ++G + F Sbjct: 170 VMYLTAEEFTNDYINAIKNPKRE--MSDFINFYRNADALLIDDVQFLSGKNRSQEEFFHT 227 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + + K ++++T DR P+++ GL D L SR G + P E ++ LQ +A Sbjct: 228 FNSLFDK-KRQIILTCDRFPKEIE-GLADRLKSRFGSGLTVSVAPPDYETRIAILQSKAE 285 Query: 180 LRGFELPEDVGRFLLKRLDREMRTL 204 F LP++V ++ +++ +R L Sbjct: 286 RLHFSLPKEVEEYIAEKVTSNIRDL 310 >UniRef50_A0Z8U4 DNA replication initiation factor (Fragment) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z8U4_9GAMM Length = 139 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L +D +F P + L + L ++LW G G+SHLL Sbjct: 4 QLPLKIPLDNDLNLNNFQPRRDLLQLLTGVDALLGGADQSLFLWGPTGTGKSHLLQGISR 63 Query: 66 ELSQRGDAVGYVPLDKRTWFVPE-VLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + R Y+P+ + + PE VLDG+ V +D+I+ I G E W+ A+F +NR+ Sbjct: 64 TIGARAL---YLPMTELLQYSPEAVLDGVVTSEAVLVDDIQLIVGREDWQEALFHSFNRL 120 Query: 125 LESGKTRLLITGDRPPRQLN 144 +G + + +G PP Q+ Sbjct: 121 KAAGIPQ-VYSGLAPPAQMT 139 >UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n=16 Tax=Rickettsiales RepID=DNAA_RICCK Length = 463 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 98/201 (48%), Gaps = 12/201 (5%) Query: 43 SGYIYLWAREGAGRSHLLHAACAELSQRG--DAVGYVPLDKRTWFVPEVLDGMEHLS--- 97 S ++L+ G G++HL+HA + Q V Y+ +K + + L E +S Sbjct: 161 SNPLFLYGGVGLGKTHLMHAIGWYIKQNNPNRKVIYMSAEKFMYQFVKALRNKEVISFKE 220 Query: 98 ------LVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 ++ ID+I+ I G + + F +N ++++ + +++I+ DR P L+ + Sbjct: 221 KFRSVDVLMIDDIQFICGKDSTQEEFFHTFNTLIDNNR-QIVISCDRSPSDLDNIEDRIK 279 Query: 152 SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 SRL WG + + + E +L L+ + ++P++V FL ++ +R L L+++ Sbjct: 280 SRLGWGLVADVHSTTYELRLGILESKIEQMNVKIPKNVIDFLASKIVSNVRELEGALNKV 339 Query: 212 DRASITAQRKLTIPFVKEILK 232 S +++T+ + IL+ Sbjct: 340 IAHSNFTLKEITLENTQNILR 360 >UniRef50_C8N934 Chromosomal replication initiator protein dnaA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N934_9GAMM Length = 444 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 31/214 (14%) Query: 13 LPDDETFASF--WPGDNSSLLAALQNVLRQEHSGYIY-------LWAREGAGRSHLLHAA 63 L D F +F P +N + AA + G+ + ++ G G+SHL+HAA Sbjct: 107 LNSDYQFHNFVAAPSNNEAFAAA-----ERVSGGHFFADSNPLLIYGGTGLGKSHLMHAA 161 Query: 64 CAELSQRG-DAVGYVPLDKRTWFVPEVL------------DGMEHLSLVCIDNIECIAGD 110 L + G AV Y+ ++ +V E L + + + + ID+++ + G Sbjct: 162 GNALRRNGRTAVMYMNAEQ---YVNEFLAALAGKTQKAFSNRLRSVDALLIDDVQFLGGK 218 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 + F +N +++ K ++++T DR P+++ L SR G ++ E + Sbjct: 219 TQSQAEFFHTFNELIDK-KRQIIMTCDRYPKEIEGLEARLKSRFGAGLTVSIRAPEPETR 277 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 L+ +A+ + F LP+DV F+ + ++ +R L Sbjct: 278 FAILKSKAKEQNFPLPDDVAYFIAENIESNVRDL 311 >UniRef50_A9E209 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A9E209_9RHOB Length = 226 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 10/213 (4%) Query: 21 SFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLD 80 +F+ ++++ A+ + R G + L +G+G++HL H A+LS + L Sbjct: 19 AFFVAPSNAMAMAMIDGWRGWAGGKLALTGPQGSGKTHLTHV-WADLSG-AQIISASAL- 75 Query: 81 KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPP 140 +T +P + G V ++++ IA D+ + +F L+N +L G+ LL+TG Sbjct: 76 -QTADIPALARGP-----VAVEDVHQIAQDDAAQTELFHLHNLVLAEGQA-LLLTGTGVV 128 Query: 141 RQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDRE 200 L LPDL SR+ ++ D L R ++ +L+ R+DR Sbjct: 129 AHWGLTLPDLVSRMRGATAVEMDAPDDALLSALLVKLLADRQLTPKPELINYLMTRMDRS 188 Query: 201 MRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 +D+LD AS+ +R LT ++L + Sbjct: 189 FAAAIALVDRLDAASLAQKRPLTRALAAQVLDI 221 >UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n=1 Tax=beta proteobacterium KB13 RepID=B6BVS5_9PROT Length = 450 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 15/229 (6%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGD-- 72 F +F G + L AA + V + Y ++++ G G++HLL + ++ + Sbjct: 120 NFENFVTGRANQLATAAAKQVSERPGESYNPLFIYGGVGLGKTHLLQSIGNKVKEENKDF 179 Query: 73 AVGYVPLDKRTWFVPEVLDG---------MEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 + Y+ ++ V + +G L L+ ID+I+ I + F +N Sbjct: 180 KIKYLHAERYVTDVVKAYEGKTFDQFKKNYHSLDLLLIDDIQFIGKKNRTQEEFFYAFNT 239 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 ++E+ K +++IT D P+++ L +R WG ++P E ++ L +A + Sbjct: 240 LIEN-KKQIIITCDSYPKEIQGVDERLRTRFSWGLTVAIEPPELEMRVAILLKKAEISKI 298 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LPEDV F+ K++ +R L L+++ S + + KE LK Sbjct: 299 TLPEDVAFFIAKQIRSNVRELEGALNRIVALSNFTNLPIDLNLAKEALK 347 >UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n=2 Tax=Labrenzia RepID=A0NR08_9RHOB Length = 491 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 23/213 (10%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF +F G ++SL A + H G +Y+ + G G++HLL AA +E + G V Sbjct: 158 TFDTFAEGASNSLACAAVRQMAAGHQGTLDMLYIHSATGIGKTHLLQAAASEARKTGRQV 217 Query: 75 GYVPLD---------KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 Y+ + RT P + M + L+ +D+++ + G + E F +L Sbjct: 218 AYLSAEFFMYHLVPALRTPAFPILRQAMRSIDLLLVDDLQFLHGKQAAEE--FSKTLELL 275 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR---- 181 +++++ DRP L+ L R+ G++ +Q + + L+ L+ R+ Sbjct: 276 MESPSQIIMAADRPAEDLDTLGDALRFRIQKGEVVGIQ--ATDYALRHDILKKRINAARR 333 Query: 182 ---GFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 GF +PEDV ++ + + R L L++L Sbjct: 334 THPGFSVPEDVADYIARYVIASARDLEGALNRL 366 >UniRef50_B0S416 Chromosomal replication initiator protein dnaA n=2 Tax=Finegoldia magna RepID=B0S416_FINM2 Length = 485 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 19/232 (8%) Query: 19 FASFWPGDNSSLLAALQNVLRQE-HSGY--IYLWAREGAGRSHLLHAACAELSQRGDAVG 75 F +F G N+ L A + Q + Y +++ + G G++HL+HA E+ + Sbjct: 151 FDTFVKGKNNELALAAALAVAQNPATAYNPLFIHGKAGLGKTHLMHAIAHEILKNNPKAR 210 Query: 76 YVPL--------------DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + DK T + ++ ++ ID+I+ IAG + + F + Sbjct: 211 VIYTTSESFTNELISSIGDKSTKKNSQFRQKYRNIDVLLIDDIQFIAGKQGTQEEFFHTF 270 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + K +++++ DRPP+++ L SR +WG + +QP E ++ + Sbjct: 271 NELYNHNK-QIILSSDRPPKEIKTLEERLVSRFEWGLMADIQPPDYETRVAIVNEYLDRN 329 Query: 182 GFELPEDVGRFLLKRLDREMRTL-FMTLDQLDRASITAQRKLTIPFVKEILK 232 LP ++ ++ + +R L ++ + + ++ +T+ K +LK Sbjct: 330 NTSLPPEIIDYIAMNVKSNIRELEGAVMNVVGQKTLIGDGNITLDLAKNVLK 381 >UniRef50_C7M114 Chromosomal replication initiator protein dnaA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M114_ACIFD Length = 458 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 21/232 (9%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAA--CAELSQRGD 72 TF +F G ++ AA +V Y +++ G G++HLLHA A + Sbjct: 123 TFEAFVIGSSNRFAHAAALSVAETPARSYNPLFIHGDAGLGKTHLLHAIGNYARENYPNL 182 Query: 73 AVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 YV + F+ E +D ++ ++ +D+I+ + G E + F Sbjct: 183 LTTYVSTET---FLNEFVDAIKRNQTSEFKARYRACDILLVDDIQFLEGKEAIQEEFFHT 239 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N L + ++++T DRPPR L L SR G I +QP E + L+ +A Sbjct: 240 FN-TLYGAQKQIVLTSDRPPRALATLEDRLRSRFAMGLITDVQPPDLETRAAILRRKAED 298 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G +P V F+ + +R L L +L S +Q +T+ +++L Sbjct: 299 AGVTVPATVIEFIAASITDNIRELEGALTRLAAFSTLSQTGITLTMAEQVLS 350 >UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n=3 Tax=Prevotella RepID=C9PTA5_9BACT Length = 469 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 48/232 (20%), Positives = 109/232 (46%), Gaps = 18/232 (7%) Query: 17 ETFASFWPGDNSSLLAALQNVLRQEHSGY-----IYLWAREGAGRSHLLHAACAELSQ-- 69 +TF+++ GD++ L ++ + EH ++++ G G++HL++A + Q Sbjct: 135 QTFSNYIEGDSNKLSRSV-GLSIAEHPNTNQFNPMFIYGPSGCGKTHLVNAIGVQTKQLY 193 Query: 70 RGDAVGYVPLD-KRTWFVPEVLDGMEH--------LSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ + FV VL + + ++ +D+++ A + + F + Sbjct: 194 PQKRVLYISAHLFQVQFVNAVLKNATNDFIKFYQTIDMLIVDDVQTWASADKTQETFFHI 253 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + +GK R+++ DRPP +LN L +R G I +L+ + + + L + R Sbjct: 254 FNHLFRNGK-RIILASDRPPVELNDMSDRLITRFSCGIIAELEKPNVQLCVDILNAKIRR 312 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G ++P +V +F+ + + +R L ++ L S+ + + + ++K Sbjct: 313 DGLKIPAEVTQFIAETANGSVRDLEGVINSLMAYSVVYNSDIDMRLAERVIK 364 >UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QB93_9SPHI Length = 469 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 20/243 (8%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY-----IYLWAREGAGRSHLLH 61 L+L YL TF ++ GD + LA E G + ++ G G++HL+ Sbjct: 128 LTLDSYLNPSYTFDNYVEGD-CNRLARSAGYAVAERPGVTSFNPLMIYGGVGLGKTHLVQ 186 Query: 62 AACAEL--SQRGDAVGYVPLDKRT-WFVPEV-LDGME-------HLSLVCIDNIECIAGD 110 A + + +G V YV +K T F+ V DG+ + ++ ID+++ + Sbjct: 187 AIGNFIKNNNQGKFVLYVTSEKFTNQFLNAVRSDGIRDFTSFYMQVDVLVIDDVQFLQKK 246 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDED 169 E + F ++N + +SGK ++++T DR PR L+ GL D L SR WG LQ E Sbjct: 247 EKTQEIFFHIFNHLHQSGK-QIIMTSDRAPRALD-GLEDRLLSRFKWGLSADLQTPDLET 304 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ +Q + + G + + V +L ++ +R L + L + +R++ + K+ Sbjct: 305 RIAIIQKKLQAEGIYIDDTVIEYLAHSVNTNVRELEGVIVSLMAQASLNRREIDLELAKQ 364 Query: 230 ILK 232 L+ Sbjct: 365 TLR 367 >UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n=14 Tax=Helicobacter RepID=DNAA_HELPJ Length = 457 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 15/205 (7%) Query: 13 LPDDETFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHA-ACAELS 68 + D TF +F G N+++ + V + + Y + + G G++H+L+A L Sbjct: 110 VKDSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALE 169 Query: 69 QRGDAVGYVPLDKRTWFVPEV----LDGME----HLSLVCIDNIECIAGDELWEMAIFDL 120 + V D T F+ + +D + H +D+ + + G E F Sbjct: 170 KHKKVVLVTSEDFLTDFLKHLDNKNMDSFKKKYRHCDFFLLDDAQFLQGKPKLEEEFFHT 229 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + + K +LI+ DR P+ + GL D L SR +WG K+ P E KL ++ + + Sbjct: 230 FNELHANSKQIVLIS-DRSPKNI-AGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQ 287 Query: 180 LRGFELPEDVGRFLLKRLDREMRTL 204 L LPE+V ++ + + +R + Sbjct: 288 LNKITLPEEVMEYIAQHISDNIRQM 312 >UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n=6 Tax=Helicobacteraceae RepID=DNAA_HELHP Length = 456 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 112/239 (46%), Gaps = 26/239 (10%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQN-VLRQEHSGY--IYLWAREGAGRSHLLHAACAE 66 P Y TF +F G ++ + VL+Q+ S Y + L+ + G G++HLL+A + Sbjct: 120 PFY-----TFENFVVGKSNEYAYTIAKLVLQQQASAYNPVLLYGKSGLGKTHLLNAIGND 174 Query: 67 LSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSL------------VCIDNIECIAGDELWE 114 + ++ V YV + F+ + +D ++ ++ + ID+++ G E + Sbjct: 175 VKEKNKNVLYVTSED---FLNDYMDKIKRKTMDSFRDKYRKCDYLLIDDVQFFGGKEGIQ 231 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQA 173 + +N + S K ++++T D+PP+++ GL + L +R +WG + ++ E K+ Sbjct: 232 EELLHTFNTLHNSQK-QIVMTSDKPPKEIK-GLEERLRTRFEWGAMAEITNPELETKIAI 289 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ + + L +V ++ + +R + L ++ + ++ K +LK Sbjct: 290 IKSKCEVNRIVLENEVIDYIASNIYGNIRQIEGILSTINAHINLSPESSSLKIAKNVLK 348 >UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFK9_HALO1 Length = 498 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 22/233 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ-RGDA 73 TF SF G ++ L A H +++ G G++HLLH+ L R DA Sbjct: 166 TFDSFVAGPSNQLALAASQAAASSHPPKYNPVFICGGVGLGKTHLLHSIGHSLHGLRPDA 225 Query: 74 -VGYVPLDKRTWFVPEVLDGM-------------EHLSLVCIDNIECIAGDELWEMAIFD 119 + Y+ ++ F+ E + + E L+ ID+++ +AG + + F Sbjct: 226 RILYLSGER---FMNEYILAIRSNRMHEFRRRYREGCDLLLIDDVQFLAGKDGTQDEFFH 282 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + +S + ++++T DR P +++ L SR WG + ++P E ++ L+ +A Sbjct: 283 TFNALHDSQR-QIVLTADRKPHEISDIADRLRSRFQWGLLADIEPPELEMRMAILRQKAE 341 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ELP+DV ++ + +R L L +L + +++ +T+ F +E L+ Sbjct: 342 AEHIELPDDVVLYIATAIRANVRELEGALIRLSAYASLSRKPITLAFARETLE 394 >UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WL10_9ACTO Length = 591 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 15/229 (6%) Query: 18 TFASFWPGDNSSLLAALQ-NVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ--RGD 72 TF +F GDN+ A V + Y ++L++ G G++HL+HA Sbjct: 253 TFDNFVIGDNNRFATATSLAVAESPGTTYNPLFLYSDSGMGKTHLMHAIGNYALNLFPSI 312 Query: 73 AVGYVPLDKRT-WFVPEVLDGME--------HLSLVCIDNIECIAGDELWEMAIFDLYNR 123 V YV ++ T F+ V DG + + ++ ID+I+ I G + F +N Sbjct: 313 KVRYVSAEEFTNAFINSVRDGHQAEFKNQFRTVDILLIDDIQFIGGRDSTVEEFFHTFNA 372 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + S K +++IT D P LN + SR + G + + E ++ L+ +A GF Sbjct: 373 LTNSNK-QIVITSDVSPNLLNGFEERMLSRFNSGVTANIDRPNLETRIAILEKKAHSDGF 431 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P +V ++ + +R + L ++ + +++ +++ + ILK Sbjct: 432 TVPREVNEYIATHMLTNVREMEGALRRVTAFADLSKQTISLGLAEMILK 480 >UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBU6_DESAH Length = 469 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 31/255 (12%) Query: 4 PAQLSLP-LYLPDDE--------TFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAR 51 P Q++LP L + D TF F GDNS + L Q S G IYL + Sbjct: 113 PMQMALPGLNIRSDSGRMLKKGYTFDRFVVGDNSDFAYSAALSLAQTSSVNNGAIYLLSD 172 Query: 52 EGAGRSHLLHAACAELSQRG--DAVGYVPLDKRTWFVPEVLDGMEHLSL----------- 98 G G+SHL A + +G D V YV + F E++ +++ ++ Sbjct: 173 TGLGKSHLSQAVGHHVISQGFSDKVYYVTAED---FTNEMVSSIKNNTINGFKEKYRRKC 229 Query: 99 --VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 + ++++ ++G + + + + ++++ K +++ +G P + L SRL Sbjct: 230 DVLILEDVHFLSGKDATQKELAMTLDYLMDAEK-KIIFSGCYLPDDIPKMNEQLKSRLTL 288 Query: 157 GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASI 216 G + K+ P + + +++ L+ +++ GF +P DV +L + L +R L L + R S Sbjct: 289 GMVTKIDPPNFKTRVKILKNKSKYDGFVIPNDVTEYLAQELCDNVRQLESGLMGVARKSA 348 Query: 217 TAQRKLTIPFVKEIL 231 K+ I + +L Sbjct: 349 LLGEKIDINLARGVL 363 >UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n=10 Tax=Bacteroidetes RepID=A4CLW7_9FLAO Length = 474 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/230 (20%), Positives = 108/230 (46%), Gaps = 16/230 (6%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQR--G 71 F +F GD++ L + + + G + ++ G G++HL HA E+ + Sbjct: 144 NFENFLEGDSNRLARSAGMAVANKPGGTSFNPLLVFGGVGLGKTHLAHAIGVEIKDKYPE 203 Query: 72 DAVGYVPLDKRTW-FVPEVLDGMEH--------LSLVCIDNIECIAGDELWEMAIFDLYN 122 V Y+ +K T ++ V + + ++ ID+++ ++G + F ++N Sbjct: 204 RTVLYISAEKFTQQYIESVRKNTRNDFIHFYQLIDVLIIDDVQFLSGKSGTQDVFFHIFN 263 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + ++GK ++++T D+ P + L SR WG +LQ E ++ L+ + G Sbjct: 264 HLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAELQSPDYETRVCILKNKLYRDG 322 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 E+PE++ ++ K + +R L + L S ++++T+ +++++ Sbjct: 323 VEMPEEIIDYVAKHIKSNIRELEGAIISLIAQSSFNKKEVTLDLAQQVVE 372 >UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein DnaA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD9C2 Length = 491 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 24/176 (13%) Query: 46 IYLWAREGAGRSHLLHAACAEL-----SQRGDAVGYVPLDKRTWFVPEVLDGM------- 93 + + G G++HLLHA + S R V YV ++ F +V++ + Sbjct: 186 LVIHGESGLGKTHLLHAIGHYVLGLYPSSR---VRYVNTEE---FTNDVINAIGERRTGA 239 Query: 94 -----EHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLP 148 + ++ +D+I+ I G E + F +N + K ++++T DRPP+ L Sbjct: 240 LKRKYREIDVLLVDDIQFIEGKEATQEEFFHTFNALHNENK-QIVMTSDRPPKNLKTLEE 298 Query: 149 DLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 L +R +WG + P E ++ L+ +A G +P DV F+ ++ +R L Sbjct: 299 RLRNRFEWGLTTDVTPPELETRIAILRKKASSDGLTVPADVLEFIASKVQSNIREL 354 >UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A5Z7E4_9FIRM Length = 462 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 24/236 (10%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGDA 73 TF SF G N+++ A + ++ E G +Y ++ G G++HL+ + + + Sbjct: 125 TFDSFVVGSNNNI-AQVTSLAVAESPGDVYNPLFIYGGVGLGKTHLIQS-IGNFVLKNNP 182 Query: 74 VGYVPLDKRTWFVPEVLD-----------------GMEHLSLVCIDNIECIAGDELWEMA 116 V F EV+D + ++ ID+I+ I+G + + Sbjct: 183 SAKVLYTTSESFTNEVIDLLRKKKTNQEEIIEFRKKYRSVDVLLIDDIQFISGRDRTQEE 242 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 IF+++N + K ++++T D+ P+ + L SR + G +Q E ++ L+ Sbjct: 243 IFNIFNDLFMKHK-QIVLTSDKKPKDMEGIAERLISRFEQGLTVDIQNPDYETRMAILKK 301 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A G+ + E V +++ +R L +L ++ S + +T+ F +L+ Sbjct: 302 KAETSGYNIDEGVLQYIANHFVSNVRELEGSLTRVITFSKISHSPITVDFASGVLQ 357 >UniRef50_A8LQU3 Chromosomal replication initiator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LQU3_DINSH Length = 229 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 64/133 (48%) Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 V I++ + + G + A+F L+NR+ + LLITG PP + ++ LPDLASRL Sbjct: 89 VAIEDADQLFGMGEAQEALFHLHNRLAAEAEGALLITGAAPPARWSIALPDLASRLQAMP 148 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + +L D L R P ++ FLL R++R + +LD +++ Sbjct: 149 LAQLSAPDDALLGALLAKLFEDRQIAPPPNLIPFLLIRMERSFAAARAVVAELDHRALSE 208 Query: 219 QRKLTIPFVKEIL 231 +R + EIL Sbjct: 209 RRAIGTALAAEIL 221 >UniRef50_B3CMG6 Chromosomal DNA replication initiator-related protein n=7 Tax=Wolbachia RepID=B3CMG6_WOLPP Length = 211 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 23/187 (12%) Query: 48 LWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECI 107 L+ +G++HL H + DA+ ++ ++ FV E M + +++++ I Sbjct: 42 LFGPNSSGKTHLAHI----WQSKNDAI-FIDVNN---FVSE----MRYSDAFILEDVQNI 89 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 +E+ + YN + E+ K RLLIT P++LN L DL+SR+ K+ P S+ Sbjct: 90 KDEEM----LLHCYNYMKENDK-RLLITSSILPKKLNFKLKDLSSRILSTISVKILPASE 144 Query: 168 EDKLQALQLRARLRGFELPED--VGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E L + L + +L D V ++L R++R ++ ++++D SI + +TIP Sbjct: 145 E--LLRIMLIKQFSDKQLKIDLKVIDYILARIERSFHSINKVIEKIDNESIGSN--VTIP 200 Query: 226 FVKEILK 232 F+ +LK Sbjct: 201 FINTLLK 207 >UniRef50_C8P211 Chromosomal replication initiator protein dnaA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P211_ERYRH Length = 471 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 25/234 (10%) Query: 1 MNTPAQLSLPLYLPDD-----ETFASFW--PGDNSSLLAALQNVLR-QEHSGYIYLWARE 52 + P Q +P+ + +D +TF +F P + S AAL R + ++++ Sbjct: 114 VQVPVQPQIPVVIRNDGIAPNQTFDNFVVGPSNKESHSAALGCAYRPGQFYTPLFIYGNS 173 Query: 53 GAGRSHLLHA-----------ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCI 101 G G++HLL+A A + D V V + + + + M +L ++ I Sbjct: 174 GLGKTHLLNAIGNYIKKLNPDARVLYTSSSDFVRQVANSIQNRTIEDFKEQMYNLDVLLI 233 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIY 160 D+I+ +AG E F ++N ++ K +++IT DR P ++ GL D L SR G Sbjct: 234 DDIQFLAGKEKSHEIFFHIFNELI-YNKKQIVITSDRLPTEIK-GLEDRLISRFSSGLSV 291 Query: 161 KLQPLSDEDKLQALQLRARLRGFE---LPEDVGRFLLKRLDREMRTLFMTLDQL 211 + E L L+L+ + + + EDV ++ +++R L L++L Sbjct: 292 GVDSPEFETSLAILELKIKHKSVDPGLFDEDVLSYIASNFSKDVRMLEGALNRL 345 >UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n=1 Tax=Frankia sp. CcI3 RepID=Q2JH46_FRASC Length = 562 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 12/170 (7%) Query: 46 IYLWAREGAGRSHLLHAACAELSQ--RGDAVGYVPLDKRTW-FVPEVLDGMEH------- 95 ++++ G G++HLLHA + V YV ++ T F+ + D + Sbjct: 257 LFIYGDSGLGKTHLLHAIGHYALKLYPNMRVKYVSSEEFTNDFINSIRDDRQQAFQRRYR 316 Query: 96 -LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + ++ +D+I+ + E + F +N +L G+ +++I+ DR P+QL+ L SR Sbjct: 317 DIDVLLVDDIQFLENKERTQEEFFHTFN-VLHDGEKQIVISSDRSPKQLSALEDRLRSRF 375 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 +WG + + P E ++ L +A +P DV ++ ++R +R L Sbjct: 376 EWGLMTDITPPDLETRIAILSKKAATERLPVPPDVLEYIATHIERNIREL 425 >UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPS9_9BACT Length = 470 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 19/246 (7%) Query: 3 TPAQLSLPLYLP--DDETFASFWPGDNSSLLAALQNVLRQEHSGY----IYLWAREGAGR 56 TP +L P P D +F +F GD++ L A + E G+ ++++ G G+ Sbjct: 122 TPKELKAPNNFPSSDRYSFKNFVVGDSNRLAFATSKAV-SESPGFSFNPLFIYGSSGLGK 180 Query: 57 SHLLHAACAELSQRG--DAVGYVPLDK-RTWFVPEVLDGMEH--------LSLVCIDNIE 105 SHLLHA E + Y+ ++ F+ + + H + ++ +D+++ Sbjct: 181 SHLLHAIAQETLSHNPYHRIEYLSAEEFSNIFIDSIKNQDGHNFRKRFRNVDILLLDDVQ 240 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + + F +N + K ++++T D P +L+ L SR + GQI + Sbjct: 241 FLKNKTKTQEEFFHTFNALYSLNK-QIVLTSDCQPHELDGLEKRLVSRFEHGQIVDVLKP 299 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L+L+ +P +V F+ + +R L L +L + T ++ + Sbjct: 300 EFETRVAILRLKRDSMNVHIPNEVLDFIASNIKSHIRKLEGALVRLVTYASTMGYEVNVS 359 Query: 226 FVKEIL 231 +E+L Sbjct: 360 LAREVL 365 >UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n=6 Tax=Betaproteobacteria RepID=A1VUS9_POLNA Length = 465 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 18/201 (8%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDA--VGYVPLDKRTWFVPEVLDGMEH-------- 95 ++++ G G++HL+HA +L A V Y+ ++ FV +V+ + Sbjct: 166 LFIYGGVGLGKTHLMHAIGNKLMADNPAAKVLYIHAEQ---FVSDVVKAYQRKTFDDFKE 222 Query: 96 ----LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 L L+ ID+++ +A + + F+ + +L + K+ +++T D P+ L L Sbjct: 223 RYHSLDLLLIDDVQFLANKDRTQEEFFNAFEALL-TKKSHIVMTSDTYPKGLADIHERLV 281 Query: 152 SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 SR D G ++P E ++ L +A G LPE+V F+ K + +R L L ++ Sbjct: 282 SRFDSGLTVAIEPPELEMRVAILIRKADADGAVLPEEVAFFVAKNVRSNVRELEGALRKI 341 Query: 212 DRASITAQRKLTIPFVKEILK 232 S + ++++I +E L+ Sbjct: 342 QAYSRFSHKEISIQLAREALR 362 >UniRef50_Q9Z8M9 Chromosomal replication initiator protein dnaA 1 n=13 Tax=Chlamydiaceae RepID=DNAA1_CHLPN Length = 460 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 10/177 (5%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME---------HL 96 IYL+ EG+G++HL+ +A + L + G + YV D T + + E ++ Sbjct: 144 IYLFGPEGSGKTHLMQSAISVLRESGGKILYVSSDLFTEHLVSAIRSGEMQKFRSFYRNI 203 Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 + I++IE +G + F +N + GK ++++ P L L SR +W Sbjct: 204 DALFIEDIEVFSGKSATQEEFFHTFNSLHSEGKL-IVVSSSYAPVDLVAVEDRLISRFEW 262 Query: 157 GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 G + PL E L + + E FL+ L ++TL L+ L + Sbjct: 263 GVAIPIHPLVQEGLRSFLMRQVERLSIRIQETALDFLIYALSSNVKTLLHALNLLAK 319 >UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSM0_9CORY Length = 527 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ--RGD 72 TF SF G ++ AA V Y +Y+W G G++HLLHA Q G Sbjct: 188 TFESFVIGKSNQFSQAAAFAVAESPAEAYNPLYIWGGSGLGKTHLLHATGNYALQLHPGI 247 Query: 73 AVGYVPLDKRTW-FVPEVLDGME--------HLSLVCIDNIECIAGDELWEMAIFDLYNR 123 V YV ++ T ++ V D + +L ++ +D+I+ + G E + F +N Sbjct: 248 RVMYVSSEEFTNDYINSVRDDKQESFKHRYRNLDILMVDDIQFLEGKEGTQEEFFHTFNA 307 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + ++ K +++++ DRPP+ L L +R G I +QP E ++ L+ +A Sbjct: 308 LHQANK-QIILSSDRPPQNLVTLEDRLRTRFQAGLITDIQPPDLETRIAILEKKAIAEHV 366 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ++ D + +R+L L ++ + R++T V+E L Sbjct: 367 QVDRDSLTEIATPFPGSIRSLEGALIRVTAFASLTHRQITPDLVREAL 414 >UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n=34 Tax=Proteobacteria RepID=DNAA_AZOSE Length = 481 Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 17/235 (7%) Query: 13 LPDDETFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 L D TF + G + L AA V + + Y ++++ G G++HL+HA + + Sbjct: 146 LNADFTFDTLVTGRANDLARAAAMQVAQNPGTSYNPLFVYGGVGLGKTHLVHAIGNAVYR 205 Query: 70 RG--DAVGYVPL-----DKRTWFVPEVLDGMEH----LSLVCIDNIECIAGDELWEMAIF 118 + YV + D + + D + L L+ ID+I+ + F Sbjct: 206 HNPRAVIRYVHVEDYYADVVRAYQQKSFDAFKRYYRSLDLLLIDDIQFFNNKNRTQEEFF 265 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLR 177 +N + E+ K +++IT D P+ + GL D L SR DWG +++P E ++ LQ + Sbjct: 266 HAFNALTEARK-QIVITCDTYPKDIQ-GLEDRLISRFDWGLTVQIEPPELEMRVAILQKK 323 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +L +DV + K L +R L L+++ + R +T+ K+ LK Sbjct: 324 AEALRVDLHDDVAFLIAKNLRSNVRELEGALNKVVAFARFHGRGITLEVAKDALK 378 >UniRef50_UPI0001C36FC2 chromosomal replication initiation protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FC2 Length = 457 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 22/237 (9%) Query: 16 DETFASFWPG-DNSSLLAALQNVLRQEHSGYI------YLWAREGAGRSHLLHAACAELS 68 D TF +F G N LA ++V + + +++ G G++HL+ A E+ Sbjct: 115 DYTFDTFIEGRSNEFALACSKSVAKNCGEKAVPDYNPLFIYGPSGMGKTHLITAIANEVR 174 Query: 69 QRGDAVGYVPLDKRTWFVPEVLDGMEHLS-------------LVCIDNIECIAGDELWEM 115 + V + F E+++ + + ++ ID+I+ +G E + Sbjct: 175 KNHPDFNIVYVTSEA-FGGELINALNNTGNIDDFHAKYRNADILLIDDIQFFSGKERMQE 233 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F + + + G+ +++IT D+PP++L L +R + G I + E +L + Sbjct: 234 EFFHTFYTLHQEGR-QIVITSDKPPKELLTLEERLRTRFEGGLIADISAPDYETRLAIIN 292 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ L ++P +V F+ RL +R L + +L + A +TI + +++ Sbjct: 293 RKSELLELKMPSEVAEFMANRLKSNIRQLEGAVVRLKALNHFAGSPITISMAQSVIR 349 >UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n=2 Tax=Porphyromonas gingivalis RepID=DNAA_PORG3 Length = 473 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 12/197 (6%) Query: 47 YLWAREGAGRSHLLHAACAELSQRGD--AVGYVP---------LDKRTWFVPEVLDGMEH 95 +++ G G++HL HA + + V YV R + + + + Sbjct: 175 FIYGASGVGKTHLCHALGLRVREMHPRLKVLYVSSHLFEMQFTTAARMGTINDFIAFYQQ 234 Query: 96 LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLD 155 + ++ ID+I+ + G + ++A F ++N + GK ++++T D+PP LN L +R+ Sbjct: 235 VDVLIIDDIQWLIGKKKTQLAFFQVFNHLYMLGK-QIVLTSDKPPVDLNGMEERLVTRMA 293 Query: 156 WGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 K++ + + + LQ R G L E V F+ + + +R L TL L S Sbjct: 294 GATCVKIERPDLKLRREILQQRTLQSGVRLDESVLNFIAENVCDNVRELEGTLVSLITNS 353 Query: 216 ITAQRKLTIPFVKEILK 232 + +++ + F K I++ Sbjct: 354 VVVGKEIDLTFAKRIVR 370 >UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S6M2_SALRD Length = 524 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 12/190 (6%) Query: 53 GAGRSHLLHAACAELSQR--GDAVGYVPLDK-RTWFVPEVLDGM--------EHLSLVCI 101 G G++HL+ A ++ R V YV ++ T FV + + + ++ + Sbjct: 229 GLGKTHLIQAIGNHVAARDASKTVFYVSSERFTTEFVQSIQENQIGEFSTFYRQVDVLIV 288 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 D+++ G E + F ++N + ++G +++++ DRPPR+++ L SR WG Sbjct: 289 DDVQFFGGKEKTQEEFFHIFNALRQAG-NQIVLSADRPPREIDGLEERLLSRFQWGLSAD 347 Query: 162 LQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 L+P + ++ L+ +A G +L +DV F+ + ++ +R L L +L + Q Sbjct: 348 LKPPGLDTRISILRRKAEDDGIDLDDDVVEFIAQSIESNIRELEGALIRLLAHATLHQLD 407 Query: 222 LTIPFVKEIL 231 +T+ KE+L Sbjct: 408 ITLDLAKEVL 417 >UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n=1 Tax=Magnetococcus sp. MC-1 RepID=DNAA_MAGSM Length = 447 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 26/205 (12%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPE---------------VL 90 +++ G G++H++ A G+ V + DKR ++ V Sbjct: 148 LFIHGGVGLGKTHVMQAI-------GNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVF 200 Query: 91 DGMEH---LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGL 147 D E+ + ++ +D+I+ IAG + + F +N + E+ K ++++T D P ++ Sbjct: 201 DFKENFRSVDVLLVDDIQFIAGKKATQEEFFHTFNALYEA-KKQIVMTADSFPHEIEHLE 259 Query: 148 PDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMT 207 L SR G + +QP E ++ LQ +A G L ++V FL + +R L Sbjct: 260 ERLRSRFGMGLVADMQPPDLETRVAILQKKAGSEGLRLADEVAFFLADAVQTNVRELEGA 319 Query: 208 LDQLDRASITAQRKLTIPFVKEILK 232 L ++ + + +T+ VKE LK Sbjct: 320 LIRVSAYASLTGKPITMALVKESLK 344 >UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n=2 Tax=sulfur-oxidizing symbionts RepID=A5CY30_VESOH Length = 430 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 28/220 (12%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAAL-----QNVLRQEHSGYIYLWAREGAGRSHLL 60 Q + PL+ +D TF + G+ + + +N+ ++ +I ++ + G G++HL+ Sbjct: 83 QHTTPLF--EDYTFNNLVLGNANQMAYGATKQIAENIKTSPYNPFI-IYGKSGLGKTHLM 139 Query: 61 HAACAELSQRGDAVG--YVPLDKRTWFVPEVLDGMEHLS------------LVCIDNIEC 106 AA ++ + YVPL FV + + H + L+ +D+I Sbjct: 140 QAAGHLAKEKNPNIKIIYVPL---MDFVRNITSSLRHNTIENIKNFYQSTDLLLVDDIHL 196 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 IAG E + F ++N L SGK +++ T D+PP+ + L +R G L P Sbjct: 197 IAGKEKSQEEFFHIFN-FLFSGKKQIIFTCDQPPKNIKSLEDRLKTRFSQGLNLHLTPPE 255 Query: 167 DEDKLQALQLRARLR--GFELPEDVGRFLLKRLDREMRTL 204 E + L +++ + L ED F+ + +R L Sbjct: 256 LEMRAAILLKKSQNKRININLTEDTALFIASHIASNIRDL 295 >UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=DNAA_KOSOT Length = 447 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 24/227 (10%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR 70 L + TF +F G + +L + + + Y +++ G G++HLL A ++ + Sbjct: 104 LNANYTFENFVVGPENRVLYEVSLEISRNPGRYNPFFVYGMVGLGKTHLLQAIAHKIMEL 163 Query: 71 GDA--VGYVPLDKRTWFVPEVLDGMEHLSL-------------VCIDNIECIAGDELWEM 115 V Y+ ++ F+ +++D +++ S+ + ID+I+ + G + Sbjct: 164 HPEMRVLYITSEQ---FMNDMIDSIKYGSVRDFREHYRKKADVLLIDDIQFLIGKNGVQK 220 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQAL 174 +F +N + ++GK +++I DR P +LN G D L SR G + ++ P + + + Sbjct: 221 ELFHTFNELYDAGK-QIVICSDRNPEELN-GFHDRLVSRFQMGMVMEICPPEKDTRFKIA 278 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL-DRASITAQR 220 + A LP+DV + L +D +R L + +L ++SI +R Sbjct: 279 KKFAERESVSLPDDVAQLLADSVDGNLRILRGVIIKLIVQSSINKER 325 >UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QRY8_CHLT3 Length = 496 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGY--IYLWAREGAGRSHLLHA--ACA 65 YL F +F GD + L A + + S + + ++ G G++HL+ A A Sbjct: 156 YLNPKYRFENFVKGDCNDLAHAAAKSVSETPGKSSFNPLVIYGGVGLGKTHLIQAIGNHA 215 Query: 66 ELSQRGDAVGYVPLDKRTW-FVPEVLDGMEH--------LSLVCIDNIECIAGDELWEMA 116 + + V YV +K T FV + + H + L+ ID+I+ E + Sbjct: 216 RENNKAKFVMYVSSEKFTIEFVNAIQNNQAHEFSAFYRNVDLLIIDDIQFFERKEKTQEE 275 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 IF ++N + ++ K +++++ DRP ++L L SR WG LQ E + LQ Sbjct: 276 IFHIFNTLHQANK-QIVLSSDRPIKELKGIEERLLSRFQWGLTADLQLPDYETRRAILQR 334 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L E + F+ + +R L L +L + + + +P K IL+ Sbjct: 335 KLEENSATLDESIIDFIATNMTSNIRELEGCLVKLLATASLNAKSIDLPLAKNILR 390 >UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4T1_9ACTO Length = 525 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 28/240 (11%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC--AELSQRGD 72 TFA++ G ++ L + + S ++++ G G++HLLHA A G Sbjct: 187 TFATYVQGKSNRLARTAAAAVAEAPSRAYNPLFIYGGSGLGKTHLLHAIGHYARKLYPGI 246 Query: 73 AVGYVPLDK-RTWFVPEVLDGM--------EHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 V YV ++ + F+ V DG ++ ++ +D+++ G E F +N Sbjct: 247 TVKYVNSEEFVSDFIASVADGQMRNFKDRYRNVDILLVDDVQFFEGKEQTLEEFFHTFN- 305 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 L + ++++T D+P +L L SR G + +QP E + L L+AR G Sbjct: 306 ALRIAEKQIVLTSDQPALELKGFNNRLISRFQEGLVADVQPPDLETRQAILTLKARADGI 365 Query: 184 ELPEDVGRFLLKRLDREMR---------TLFMTLDQ--LDR--ASITAQRKLTIPFVKEI 230 + EDV ++ R+ +R T F +L++ +DR A + + +T P +EI Sbjct: 366 SVTEDVLEYIASRVTTNIRELEGALVRVTAFASLNKQPIDRTLAEVALKDVITDPTGEEI 425 >UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n=2 Tax=Cystobacterineae RepID=Q1DGD6_MYXXD Length = 450 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 20/232 (8%) Query: 18 TFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELSQRGDAV 74 TF +F D++ L AA + + H +Y++ G G++HLL A + +R + Sbjct: 120 TFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLGKTHLLQAVGNLIWERDPSQ 179 Query: 75 GYVPLDKRTWFVPEVLDGM-------------EHLSLVCIDNIECIAGDELWEMAIFDLY 121 V L F E ++ + E ++ +D+I+ + E + F + Sbjct: 180 RVVFLSSEQ-FTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTF 238 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 N + E K +++T D P ++ GL D L SR G + ++ + E ++ LQ +A Sbjct: 239 NTLYEMNKA-IVLTSDTVPAEIP-GLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVA 296 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G +LP+ V F+ K + + +R L L +L ++ +T F ++L+ Sbjct: 297 EGLDLPDSVAHFIAKHIQKNVRELEGALVKLSAVHSLTRQPVTEDFASQVLR 348 >UniRef50_A9G073 Chromosomal replication initiator, DnaA n=16 Tax=Bacteria RepID=A9G073_9RHOB Length = 256 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 18/193 (9%) Query: 44 GYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCID 102 G + L + +G++HL+H + + +P + T VP + DG + ++ Sbjct: 42 GKLVLSGPKRSGKTHLVHVWASNSGAQ-----IIPAWQLTKEDVPHLADGP-----IAVE 91 Query: 103 NIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 ++ IA + A+F L+N +L +G L++TG P + LPDL SR++ +L Sbjct: 92 DVPDIADSAPAQDALFHLHNLVLANGHA-LMLTGRAAPHLWGMSLPDLQSRIEGAPHAQL 150 Query: 163 QPLSDEDKLQALQLRARL---RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 QP +D L ++ L A+L R DV +L+ +DR +++LDR S+T Sbjct: 151 QP--PDDALLSVVL-AKLFNDRQITPKPDVIPYLVAHMDRSFAAASQIVEELDRLSLTEG 207 Query: 220 RKLTIPFVKEILK 232 R ++ E++ Sbjct: 208 RMVSRVLAVELMS 220 >UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultured marine microorganism HF4000_137B17 RepID=B3T283_9ZZZZ Length = 461 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 15/207 (7%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGDA 73 TF F G ++ L A + G +Y L+ G G++HL+HA G + Sbjct: 131 TFGRFVVGKSNELAHAAAEAV-SNRPGEVYSPLVLYGAVGLGKTHLMHAIGHRAVANGLS 189 Query: 74 VGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + Y ++ T E D ++ +D+I+ + G E + F +N + Sbjct: 190 LIYATTEEFTNEYIKAIGEGRTEEFRDRYRSTDVLLLDDIQFLIGKEQTQEGFFHTFNAL 249 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 + + +++IT DRP L L + SRL G + +Q E +L L+ +A + Sbjct: 250 HMTNR-QIVITSDRPVSALTLLEDRIQSRLAGGLVVDIQAPDIETRLAILRAKAETINQD 308 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQL 211 + + V FL +R+ + +R L +L+++ Sbjct: 309 VSQTVLDFLAERIHKNIRELEGSLNRV 335 >UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=C0E1M1_9CORY Length = 594 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 17/202 (8%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA- 73 TF ++ D++ L +A V + Y +++W G G++HL+HA +Q+ D Sbjct: 260 TFDTYVVSDSNKLPTSAAIAVAEKPARAYNPLFVWGDSGLGKTHLMHA-IGNYAQQLDPN 318 Query: 74 --VGYVPLDKRTW-FVPEVLDGME--------HLSLVCIDNIECIAGDELWEMAIFDLYN 122 + YV ++ T ++ V D + +L ++ +D+I+ + G E + F +N Sbjct: 319 LRIKYVSSEQFTNDYINSVRDDRQESFKRRYRNLDILMVDDIQFLQGKEGTQEEFFHTFN 378 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + + GK +++++ DRPP+QL L +R G I + P E ++ L +A Sbjct: 379 ALQQGGK-QIVLSSDRPPKQLTTLEDRLRTRFQSGLIADIYPPDLETRIAILMKKAEAEQ 437 Query: 183 FELPEDVGRFLLKRLDREMRTL 204 DV + + +R L Sbjct: 438 IVASRDVLELIASQFSSSIREL 459 >UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n=2 Tax=Acidaminococcus RepID=D2RMT1_ACIFE Length = 386 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 14/198 (7%) Query: 47 YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEH----------- 95 +L++ G G++HL++A ++ + + + + T F E+++ +EH Sbjct: 84 FLFSDSGLGKTHLMNAIGNQIRKNHPDMKILYISSET-FTNELIESVEHNRLEAFREKYR 142 Query: 96 -LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + ++ ID+I+ + E + F +N LE +++I+ DRPP +L+ + SR Sbjct: 143 SIDVLLIDDIQFLRNRESTQEEFFHTFN-TLEKANKQIIISSDRPPAELDTLEERMISRF 201 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 + G +Q E ++ LQ A P DV + + +R L +++ Sbjct: 202 NSGLTADIQHPDLETRMAILQNLAHTDKVPFPNDVILLIASSITSNIRELEGAYNRVCAY 261 Query: 215 SITAQRKLTIPFVKEILK 232 S ++ +T+ + LK Sbjct: 262 STVSKEPITLELCRSALK 279 >UniRef50_B4U623 Chromosomal replication initiator protein dnaA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U623_HYDS0 Length = 444 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 16/183 (8%) Query: 18 TFASFWPGDNSSLL--AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA 73 TF +F G + + A+L+ V E+S Y ++++ + G+G++HLL A G + Sbjct: 117 TFDNFIVGKQNEVAYRASLE-VATDENSIYNPLFIYGKVGSGKTHLLQAIGNRAYSLGKS 175 Query: 74 VGYVPLDKRTWFVPEVLDGMEHLS---------LVCIDNIECIAGDELWEMAIFDLYNRI 124 V Y ++ T + L +S ++ ID+I+ ++G E +M +F+++N + Sbjct: 176 VIYTSMNDFTEEMVYYLKAGNIISFREKYKGVDILLIDDIQFLSGKERTQMELFNIFNYL 235 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 + K ++ D+ PR + L SR + G + + + D+ KL ++ + ++ G Sbjct: 236 FQYNK-HIVFASDKHPRDIKDISERLVSRFEGGLLVE-TSIDDQIKLSIIKQKIQIYGLN 293 Query: 185 LPE 187 + E Sbjct: 294 VDE 296 >UniRef50_C8W8K4 Chromosomal replication initiator protein dnaA n=2 Tax=Atopobium RepID=C8W8K4_ATOPD Length = 509 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 40/234 (17%) Query: 8 SLPLY----LPDDETFASFWPGDNSSLLAALQNVLRQEHSGY-----IYLWAREGAGRSH 58 S PLY + TF F GD + L A Q+ L + ++++ G G++H Sbjct: 143 SNPLYEETSFNSNLTFDRFVVGDENEL--AHQHALNVANDAKGKANPLFIYGASGLGKTH 200 Query: 59 LLHAACAELSQRG---------------DAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN 103 LL A ++ D V V + E+ + +++ ++ ID+ Sbjct: 201 LLRAVQNYINSEDIERVCVYKDADAFVDDYVNAVRKNASGNAATELNNNYQNIDVLIIDD 260 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD----LASRLDWGQI 159 ++ +AG F+++N +++ GK ++++ DR P QL +G + SR+ G + Sbjct: 261 VQKLAGKAGTINFFFNIFNSLIDRGK-QIILAADRTPAQLGMGSDGFDDRITSRMSGGIV 319 Query: 160 YKLQPLSDEDKLQALQL---------RARLRGFELPEDVGRFLLKRLDREMRTL 204 ++ S E KL + + + L ++PE++ R++ + + +RTL Sbjct: 320 IGIESPSYEMKLNLIHVFCDRAFKERNSSLSVDDMPEEISRYMADKAGQSIRTL 373 >UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n=6 Tax=Cyanobacteria RepID=DNAA_THEEB Length = 453 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Query: 96 LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLD 155 + ++ +D+I+ I G E + F +N + E+GK ++++ DRPP Q+ L SR Sbjct: 210 VDVMLVDDIQFIEGKEYTQEEFFHTFNTLHEAGK-QVVLASDRPPSQIPRLQERLCSRFS 268 Query: 156 WGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 G I +QP E ++ LQ +A LP +V ++ +R L Sbjct: 269 MGLIADIQPPDLETRMAILQKKAEYENIRLPREVIEYIAASYTSNIREL 317 >UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LGB0_CORK4 Length = 605 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 12/177 (6%) Query: 46 IYLWAREGAGRSHLLHA-ACAELSQRGD-AVGYVPLDKRT--WFVP-------EVLDGME 94 +++W G G++H+LHA L R + V YV +++ T W + Sbjct: 303 LFIWGGSGLGKTHILHAIGHRALELRPNLRVRYVSIEEYTNEWINSIRNNRGEDFKRKYR 362 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 ++ +D+I+ +AG ++ F +N L + ++++ DR P++L P L +R Sbjct: 363 SFDILLVDDIQFLAGKPETQIEFFHNFN-ALHGAQKQIVLCSDRSPKELTELEPRLRTRF 421 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 WG +Q E ++ L+L+A ++P +V F+ ++ +R L L+++ Sbjct: 422 QWGFTQDIQKPDLETRIAILRLKAERENAQVPSEVLSFIAEQKAESVRELEGALNKV 478 >UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n=94 Tax=Proteobacteria RepID=DNAA_CUPTR Length = 589 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 23/233 (9%) Query: 18 TFASFWPGDNSSLL-AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA- 73 TF +F G + L AA V Y +YL+ G G++HL+H+ + Sbjct: 259 TFDNFVTGKANQLARAAAIQVANNPGKSYNPLYLYGGVGLGKTHLIHSIGNHMLMENPRA 318 Query: 74 -VGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEMAIFDL 120 + Y+ ++ +V +V+ + L L+ ID+I+ +G + F Sbjct: 319 RIRYIHAEQ---YVSDVVKAYQRKAFDEFKRYYHSLDLLLIDDIQFFSGKNRTQEEFFYA 375 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 + ++ + + +++IT D P+++ G+ D L SR D G ++P E ++ L +A Sbjct: 376 FEALI-ANRAQVIITSDTYPKEIT-GIDDRLISRFDSGLTVAIEPPELEMRVAILMKKAA 433 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +PE+V F+ K L +R L L ++ S + +TI +E LK Sbjct: 434 AENVNVPEEVAFFVAKHLRSNVRELEGALRKILAFSNFHGKDITIEVTREALK 486 >UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n=5 Tax=Leptospira RepID=DNAA_LEPBJ Length = 437 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 23/214 (10%) Query: 16 DETFASFWPGDNSSL--LAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRG-- 71 D TF +F GD + L AA + V + +YL+ G G++HLLHA +EL ++ Sbjct: 103 DYTFETFIVGDCNRLAYTAAKECVRKPAEINPLYLFGSVGVGKTHLLHAIGSELIKKDPW 162 Query: 72 DAVGYVPLDKRTWFVPEVLDGMEHLSLV-----------C--IDNIECIAGD-ELWEMAI 117 V Y+ + + F+ E ++ L+ C +D+I+ ++ + E + Sbjct: 163 KTVCYIDI---SSFMNEFRFALQSRELIESFKIKYQSYNCLLVDDIQLLSTNAEKTQDEF 219 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F L+N + E K +++I DRP +L + L SR G +Q + E + + Sbjct: 220 FALFNFLFER-KRQIVIASDRPSSELTIH-ERLKSRFVTGVQADIQYPNKEIRKGIVTSH 277 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 +++ L EDV FL +++ + R L L+ + Sbjct: 278 SKIMDLGLSEDVLEFLADQIEEDTRLLLGALNDI 311 >UniRef50_B9KLX6 Chromosomal replication initiator, DnaA n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KLX6_RHOSK Length = 231 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 11/158 (6%) Query: 44 GYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN 103 G + L G+G++HL H A+ R +P + L + V +++ Sbjct: 42 GKMVLVGPRGSGKTHLAHIWAAQAEAR-----LIPAEA---LARADLPALAADGAVAVED 93 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 E + GD E A+F L+N +LE LLIT PPR LGL DL SR+ + +L+ Sbjct: 94 AERLGGDRAAEEALFHLHNLMLERAGA-LLITAAGPPRDWGLGLADLKSRMQAASVTRLE 152 Query: 164 PLSDEDKLQALQLRARL-RGFELPEDVGRFLLKRLDRE 200 D+ L A+ ++ R +P + +L+ R+DR Sbjct: 153 A-PDDALLSAMLVKLFTDRQIAVPGMLVPWLVARMDRS 189 >UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKQ3_9PROT Length = 442 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/232 (18%), Positives = 103/232 (44%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ F +F GD++ + +E ++++ G G++HLL + + Sbjct: 103 LSENYNFENFIIGDSNKFAFECSVSVAKEPGIRFNPLFIYGPSGLGKTHLLQSIGNYCIK 162 Query: 70 RGDAVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 +G V V ++ + + + + ++ ID+I+ + G + + +F Sbjct: 163 KGKTVICVTSEQFANDFVFNLKNNSIDKFKQKYRNCDVLLIDDIQFLIGRDKAQEELFYT 222 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N L+ ++++T D PP+ L L +R + G I + P + E K+ + ++ Sbjct: 223 FNE-LKDKNCQIVLTNDLPPKFLKGFENRLTTRFESGIIANITPPNLETKIAIINKKSEE 281 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P DV ++ + +R + +++L+ S + K+T+ F K L+ Sbjct: 282 NRVRIPHDVVEYIAANMGDNIREIEGAINKLNAYSSILRTKITLEFTKSTLQ 333 >UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n=39 Tax=Bacteroidales RepID=DNAA_BACFN Length = 476 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/226 (20%), Positives = 99/226 (43%), Gaps = 30/226 (13%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGR 56 + PA L +L + F +F G ++ L ++ + + + ++ L G G+ Sbjct: 120 LRAPAVQDLDPHLNPNYNFETFIEGYSNKLSRSVAEAVAENPAKTVFNPLFLHGASGVGK 179 Query: 57 SHLLHAACAELSQRGDAVGYVPLDKRTWFVP------------------EVLDGMEHLSL 98 +HL +A G + + DKR +V + ++ + + + Sbjct: 180 THLANAI-------GTRIKELYPDKRVLYVSAHLFQVQYTDSVRNNTTNDFINFYQTIDV 232 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 + ID+I+ AG + F ++N + ++GK +L++T DR P L L +R WG Sbjct: 233 LIIDDIQEFAGVTKTQNTFFHIFNHLHQNGK-QLILTSDRAPVLLQGMEERLLTRFKWGM 291 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 + +L+ + E + L+ + G + P +V ++ + ++ +R L Sbjct: 292 VAELEKPTVELRKNILRNKIHRDGLQFPSEVIDYIAENVNESVRDL 337 >UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFZ6_RHOVA Length = 497 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 18/175 (10%) Query: 46 IYLWAREGAGRSHLLHAACAELSQR--GDAVGYVPLDKRTWFVPEVL---------DGME 94 +Y+ AR G G++HLLHA E+ R V Y+ ++ + E L + + Sbjct: 190 LYIHARVGMGKTHLLHAIAWEMKARNPNAKVLYLTAERFMYSFAEALQTRDAPAFKEKLR 249 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 + L+ ID++E + G ++ N +++ GK ++++ D P L + SRL Sbjct: 250 TIDLLIIDDMEFLQG-RTFQQEFCHTLNSLIDGGK-QVVVAADCAPLLLESFDARMRSRL 307 Query: 155 DWGQIYKLQPLSDEDKLQALQLRAR-----LRGFELPEDVGRFLLKRLDREMRTL 204 G + ++ L + +L+ LQ RA RGFE+P DV +L +L R L Sbjct: 308 SGGLVAEMSALDFDLRLKILQRRAAEKISLSRGFEVPGDVLEYLATQLTENGREL 362 >UniRef50_O66659 Chromosomal replication initiator protein dnaA n=1 Tax=Aquifex aeolicus RepID=DNAA_AQUAE Length = 399 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 97/190 (51%), Gaps = 16/190 (8%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 T +F G+ + L ++ L S Y I+++ G G++HLL AA E +RG V Sbjct: 84 TLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRV 143 Query: 75 GYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 Y D + + E + + + L+ +D+++ ++G E ++ F ++N + Sbjct: 144 IYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLY 203 Query: 126 ESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 K ++++ DR P++L+ G+ D L SR + G + +++ L ++ + + ++ + + E Sbjct: 204 LLEK-QIILASDRHPQKLD-GVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLE 260 Query: 185 LPEDVGRFLL 194 L ++V +LL Sbjct: 261 LRKEVIDYLL 270 >UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2T8_SALRD Length = 564 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 16/209 (7%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGDA 73 TF F GD + L + + QE Y ++ G G++HL A + A Sbjct: 226 TFDEFVEGDGNRLARSAAFAVAQEPGSTNYNPLLVYGGVGLGKTHLAQAVANYALEHNTA 285 Query: 74 --VGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 V YV D+ T FV V + L+ +D+++ E + F ++N Sbjct: 286 ERVLYVSSDRFTSQFVQSVRENRIAAFSSYYRQADLLIVDDVQFFGEKEKTQEEFFHIFN 345 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + ++GK ++ + DRPP ++ L SR WG +Q E ++ LQ +A + Sbjct: 346 DLHQNGK-QIFLCADRPPAEIPGIEERLLSRFQWGLSADIQRPDLETRIAILQRKAARQD 404 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQL 211 + DV + +R+D +R L L +L Sbjct: 405 IAVSPDVLELIAQRIDSNVRQLEGALTRL 433 >UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0S4_9BACT Length = 495 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 104/222 (46%), Gaps = 16/222 (7%) Query: 24 PGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDK 81 P + + AAL+ ++++E+ + +++ G G++HLL + ++ V V + Sbjct: 171 PNNRLAYTAALE-MIKEEYPPFNPLFIHGNVGVGKTHLLVGIWNRV-RKEQTVNAVYMSA 228 Query: 82 RTW---FVPEVLDG-ME-------HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKT 130 W F+ + G ME ++ + ID++ ++ + + +N + +S K Sbjct: 229 EKWTNEFIYALQKGKMESFRQRYRNVDVFLIDDVHFLSNKQGVQEEFLHTFNALYDSSK- 287 Query: 131 RLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVG 190 R++ D P+Q++ +LASR G + +++ +L L+ +A PE+ Sbjct: 288 RIIFASDAHPKQISQLKENLASRFMSGMVARIERPEYATRLLILRTKASKYDVYFPEEAL 347 Query: 191 RFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ ++ D +R + L L + RK+ I FVK++LK Sbjct: 348 EYIAEKFDDSVREVESALVTLTAHARFNDRKIDIAFVKDVLK 389 >UniRef50_Q3YSR1 Chromosomal DNA replication initiator-related protein n=10 Tax=Anaplasmataceae RepID=Q3YSR1_EHRCJ Length = 218 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%) Query: 32 AALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPE-VL 90 A ++ QE + +I L+ + G+G++HL H + Q+ ++ D+ E + Sbjct: 27 ATYNMLMNQEWNSFI-LYGKSGSGKTHLAH-----IWQKLKNAIFI--DQYLINTKEDIG 78 Query: 91 DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 D + + + I+NI+ I E++I YN I E+ K LL+T PR LN + DL Sbjct: 79 DIISNNNAFIIENIDNIDN----ELSILHYYNYIKENKKL-LLMTSSIAPRLLNYHIKDL 133 Query: 151 ASRLDWGQIYKL-QPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLD 209 SR+ KL P + K+ ++L A + + V ++L +R + L + Sbjct: 134 KSRILHTMSAKLANPDEELLKIMLIKLFAD-KQIHIELKVINYILNNTERSFQNLSNIVK 192 Query: 210 QLDRASITAQRKLTIPFVKEILK 232 +DR +TIPFVK I++ Sbjct: 193 CIDRNLPYYNNGVTIPFVKSIIE 215 >UniRef50_Q2CCM0 Putative uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM0_9RHOB Length = 223 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 17/192 (8%) Query: 44 GYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN 103 G + L +G+G++HL A + G + P T +PE D +V D Sbjct: 42 GKLVLAGPQGSGKTHLARLFAA---RTGALILDAPALAGTEPLPETGD------VVLEDA 92 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 E W +F L+N + +G LL T PP + + LPDL SRL + K+ Sbjct: 93 DRLPRQAEEW---VFHLHNSLAAAGGA-LLFTAAAPPTRWAVALPDLVSRLQAATVVKIG 148 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVG--RFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 +D L A LR LR +L G +L+ R+ R T+D L+ A++ ++ Sbjct: 149 --DPDDALLAAVLRKILRDRQLAYADGLIPWLVPRMTRSFAAARRTIDVLEAAALGRGKR 206 Query: 222 LTIPFVKEILKL 233 LTI +E+L++ Sbjct: 207 LTINLAREVLQM 218 >UniRef50_B3CUN8 DnaA homologue Had protein n=2 Tax=Orientia tsutsugamushi RepID=B3CUN8_ORITI Length = 216 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 3/129 (2%) Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 IE I + + ++N + E+ K +L P N LPDLASRL KL Sbjct: 91 IEDIDKTHWTDKKLLHIFNILHENNKFLMLTCSMHPT---NFILPDLASRLSAVLTIKLH 147 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 DE L R ++ ++ +L RL RE + T+ +D+ S+ +R +T Sbjct: 148 RPDDEMMKIVLMKAFSERSLKVSTEIINYLSSRLTREFSIIHDTVKLIDKYSLEHKRNIT 207 Query: 224 IPFVKEILK 232 IP +KE+LK Sbjct: 208 IPLLKELLK 216 >UniRef50_A8TLA0 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLA0_9PROT Length = 229 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 5/159 (3%) Query: 73 AVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRL 132 A G V ++ V + D + + +D++ I + A+ LYN + E G + L Sbjct: 67 ASGAVAVNAADLTVDGLPDALGDATHAAVDDLTGIRAPQ----ALLHLYNTVAERGGSVL 122 Query: 133 LITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRF 192 +++ P R + GLPDLASRL I + P + L R + EDV + Sbjct: 123 ILSRTAPAR-CDFGLPDLASRLATLPIAMVGPPDEALLAGVLGKHFADRQVAVREDVVAY 181 Query: 193 LLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ R++R + +D+LDR ++ RK+ K L Sbjct: 182 LVARMERSFSAAYRLVDRLDRLALAEGRKVDRALAKRAL 220 >UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n=70 Tax=Streptococcaceae RepID=DNAA_STRT1 Length = 454 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNS--SLLAALQNVLRQEHSGY--IYLWAREGAGRSH 58 TP +L L TF +F GD + S+ A+L V + Y ++++ G G++H Sbjct: 105 TPDLPTLNSDLNSKYTFDNFIQGDENRWSVAASLA-VADSPGATYNPLFIYGGPGLGKTH 163 Query: 59 LLHAACAELSQRGDA--VGYVPLDKRTWFVPEV-----LDGME-------HLSLVCIDNI 104 LL+A ++ + Y+ + F+ E LD M+ HL ++ ID+I Sbjct: 164 LLNAIGNKVLHDNPQARIKYITAEN---FINEFVLHIRLDKMDELKLKYRHLDVLLIDDI 220 Query: 105 ECIA--GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 + +A + + F+ +N +L ++++T DR P QLN L +R WG + Sbjct: 221 QSLAKKSTQATQEEFFNTFN-VLHDNNKQIVLTSDRNPDQLNEMEERLVTRFKWGLTVNI 279 Query: 163 QPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 P E ++ L + + P + +L + D +R L Sbjct: 280 TPPDFETRVAILTNKIMDYDYHFPPETIEYLAGQFDSNVRDL 321 >UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n=21 Tax=Bacteroidetes RepID=DNAA_FLAPJ Length = 478 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/244 (18%), Positives = 112/244 (45%), Gaps = 22/244 (9%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHA 62 L + L + +F +F GD++ L + + + G + ++ G G++HL HA Sbjct: 136 LKIESQLNANYSFDNFLEGDSNRLARSAGMAVANKPGGTSFNPLLIFGGVGLGKTHLAHA 195 Query: 63 ACAELSQR--GDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIA 108 E+ ++ V Y+ + F + ++ ++ + ++ ID+++ ++ Sbjct: 196 IGVEVKEKYPEKTVLYISAE---IFTQQYIESVKKNNRNDFIHFYQLIDVLIIDDVQFLS 252 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G + F ++N + ++GK ++++T D+ P + L SR WG ++ E Sbjct: 253 GKTGTQDVFFHIFNYLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAEIHQPDYE 311 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L+ G E+PE++ ++ + + +R L + L S ++++T+ K Sbjct: 312 TRISILKNILYRDGVEMPEEIIEYVARNIKSNVRELEGAIISLIAQSSFNKKEVTLELAK 371 Query: 229 EILK 232 ++++ Sbjct: 372 QVVE 375 >UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIX2_FIBSS Length = 441 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 17/202 (8%) Query: 19 FASFWPGDNSSLL--AALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAV 74 F +F PGD + L AAL + + Y ++++ G G++HLL + + + Sbjct: 109 FENFVPGDKAQLAFNAALAVARNPDGTQYNPLFIYGSSGLGKTHLLQSIGNYILEEDPTK 168 Query: 75 GYVPLDKRTWF-----------VPEVLDGMEH-LSLVCIDNIECIAGDELWEMAIFDLYN 122 + L + + E+ D + + ++ ID+I+ G + F ++N Sbjct: 169 RVIYLTSEDFSQQYMKCLQEKRITEMSDFYRNEVDILLIDDIQNWTGKYETQNEFFLIFN 228 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + ++GK ++++T D P ++ L SR WG +QP E + L +A R Sbjct: 229 ALHQAGK-QIVLTSDAPAAEVKNLSDRLVSRFSWGLTVDIQPPDVETREAILHKKAEERH 287 Query: 183 FELPEDVGRFLLKRLDREMRTL 204 E+ ++V R+L + + +R L Sbjct: 288 LEISDEVIRYLAENIASNVRCL 309 >UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n=16 Tax=Campylobacter RepID=DNAA_CAMJJ Length = 440 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/232 (20%), Positives = 98/232 (42%), Gaps = 21/232 (9%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGD 72 TF SF GD N A + + ++ G +Y ++ G G++HLL A + G Sbjct: 106 TFDSFVVGDSNKYAYGACKAITHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNASLEMGK 165 Query: 73 AVGYVPLDKRTWFVPEVLDGMEHLSL------------VCIDNIECIAGDELWEMAIFDL 120 V Y + F+ + +++ SL + ID+++ + + + F + Sbjct: 166 KVIYATSEN---FINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFFFI 222 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N I ++ ++++T D PP L L SR G I + P + K+ ++ + Sbjct: 223 FNEI-KNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIRKKCEF 281 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L D+ ++ L +R + + L+ + +++T+ K ++K Sbjct: 282 NDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMK 333 >UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NC96_LEPBD Length = 451 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 20/232 (8%) Query: 19 FASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQR--GDA 73 F +F G+NS L A V+ Y ++++ G G++HL+ A E+ + Sbjct: 114 FDNFIVGENSKLAYNACLAVVNNPTPVYNPLFIYGSSGLGKTHLMQAVGNEILENNPNKR 173 Query: 74 VGYVPLDKRTWFVPEVLDG--MEH-------LSLVCIDNIECIA-----GDELWEMAIFD 119 V Y ++ +VL+G ++H L ++ +D+I+ G+ E F Sbjct: 174 VYYSTSEEFANEFFKVLNGGRIQHFRDTFRALDVLLLDDIQFFEKVFGRGEGTVEEEFFH 233 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N++ E GK ++I+ D+ P+++ L SR G ++Q E ++ L+ A+ Sbjct: 234 TFNKLQELGKQIIMIS-DKSPKEIKNLSKRLESRFLSGLTVEIQSPGFETRMMILKNMAK 292 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + E+ + + ++ L+ +R L TL L+ + K+T+ V+E+L Sbjct: 293 TQDIEIDDSILEYISDSLNTNVRELEGTLTNLNARAKLLNEKITLQLVQEML 344 >UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID0_9BACT Length = 443 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 31/221 (14%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLH 61 ++S + L + TF F G N++ + + E GY Y ++ G G++HL+ Sbjct: 97 RVSANVRLNERYTFDEFVVGKNNNFAYSAAKAV-AESPGYTYNPLFIYGESGMGKTHLMQ 155 Query: 62 AACAELSQRGD--AVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECI 107 A + + G ++ Y+ + F E++DG+ + L+ +D+I + Sbjct: 156 AIGNYILKEGRNCSIYYITSEA---FTNEMIDGIRSNKMPEFRAKFRKVDLLLMDDIHFL 212 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL----DWGQIYKLQ 163 + E + F +N + E+ K ++++T DRPP+ +PDL RL + G + L+ Sbjct: 213 SRKEGTQEEFFHTFNALFEN-KKQIVLTSDRPPK----DIPDLEKRLVTRFESGLLCDLK 267 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 E ++ L+ +A L + + F+ + +R L Sbjct: 268 SPDFETRVAILRKKAEPENVVLSDAIFNFIADNITSSVRAL 308 >UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNAA_BUCCC Length = 437 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 93/196 (47%), Gaps = 18/196 (9%) Query: 46 IYLWAREGAGRSHLLHAACAE--LSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSL----- 98 ++L+ G G++HLLHA + + + V Y+ + F+ +++ +++ S+ Sbjct: 139 LFLYGNTGLGKTHLLHAIGNKFLIKNKKKKVIYIHSEN---FIQNMVNSLKNNSIDKFKN 195 Query: 99 -------VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA 151 + +D+I+ + + + +F+ +N + + + ++++T D P ++ L Sbjct: 196 YYRSIDVLLLDDIQFFSNKKKSQEELFNTFNTLF-NKQQKIVLTADCYPEYISGITEQLK 254 Query: 152 SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 SR WG + P + +++ L +A L +V +++ K++ +R L L ++ Sbjct: 255 SRFKWGLTISINPPELKTRIKILLHKAYENKILLSYEVAKYIAKKIFSNVRELEGILKKI 314 Query: 212 DRASITAQRKLTIPFV 227 SI + K+TI V Sbjct: 315 QILSILNKEKITINLV 330 >UniRef50_Q5FPM3 DnaA-related protein n=1 Tax=Gluconobacter oxydans RepID=Q5FPM3_GLUOX Length = 253 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 12/188 (6%) Query: 44 GYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN 103 G ++LW G G++HLL A E LD R + + + IDN Sbjct: 70 GRLWLWGSSGTGKTHLLTAWAHEHD-------ATVLDARLFSTSSAGGRIRVQGNLAIDN 122 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 + GDE + L N G R+L+ G PP + + LPDLASRL Sbjct: 123 ADS-PGDE---ATMLHLLNDAFSQGD-RVLMAGRLPPSRSHFMLPDLASRLRATATTATG 177 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 D+ + L R + + V +L + L R L +++LD A++ +R +T Sbjct: 178 EPEDDLRATLLLSLLADRQLVVSQTVTEWLWRHLPRTGNALVSAVERLDEAALARKRPIT 237 Query: 224 IPFVKEIL 231 E+L Sbjct: 238 RALAMEML 245 >UniRef50_B3E469 Chromosomal replication initiator DnaA n=1 Tax=Geobacter lovleyi SZ RepID=B3E469_GEOLS Length = 229 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 8/186 (4%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIE 105 +YL+ G+G++HLLHA +L+ Y L R VP + SL+ +D+++ Sbjct: 45 LYLYGPAGSGKTHLLHAIGRQLA----GEQYQVLSCRNLTVPVATNPG---SLLLVDDLD 97 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + A+++ +N+ SG T L + G P++L L SRL WG + +L Sbjct: 98 QLPDRPELRNALWEAFNQQYSSGHT-LALAGRFAPKELPTIDDHLISRLLWGLVARLDVS 156 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 D + + A+ R LP++V +LL L R++ +L D L RA++ + ++T+ Sbjct: 157 DDRSRQMLIAKLAQDRQIILPDEVAGWLLTVLPRDVGSLVSACDALYRAALQRKCRITLR 216 Query: 226 FVKEIL 231 +E++ Sbjct: 217 LARELV 222 >UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ04_9FLAO Length = 484 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/235 (19%), Positives = 107/235 (45%), Gaps = 18/235 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHSGY----IYLWAREGAGRSHLLHAACAELS 68 L D +F S+ G+++ A + + + ++L+ G G++HL A E+ Sbjct: 148 LKPDYSFDSYVEGESNKFAATVARSIAKRPGATAFNPLFLYGGYGVGKTHLGQAVGLEVK 207 Query: 69 QR--GDAVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ +K + E + + + ++ ID+I+ ++G + + Sbjct: 208 NQFPDKVVLYLSSEKFIQQFISAAKAHKQTEFANFYQMVDVLIIDDIQFLSGKSATQDSF 267 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQL 176 F +++ + ++GK ++++T D+ P + + + D + SR WG +++ + Q ++ Sbjct: 268 FHIFDHLHQNGK-QIILTSDKAPADI-MDIQDRIVSRFKWGLSAEIKSPDLSTRRQIIED 325 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + G LP D+ FL +R L ++ + S +R L++ +KE + Sbjct: 326 KLSRDGIVLPGDMLDFLAAEAKTNVRELIGVINSVIAYSTVYKRDLSLELLKETI 380 >UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDF5_9HELI Length = 440 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/234 (18%), Positives = 104/234 (44%), Gaps = 14/234 (5%) Query: 12 YLPDDETFASFWPGD-NSSLLAALQNVLRQEHS-GYIYLWAREGAGRSHLLHAACAELSQ 69 ++ + +F SF G+ N + + + + + ++ G G++HLL+A C + + Sbjct: 102 FINKNVSFNSFIVGECNKFAFETAKEIAKNQGKWNPLLIYGNTGLGKTHLLYAICNAVYE 161 Query: 70 RGDAVGYVPLDKRTWFVPE----VLDGMEHL-------SLVCIDNIECIAGDELWEMAIF 118 R V + + F + M+H + ID+++ ++ + ++ F Sbjct: 162 RTPNAKIVYITAESMFNEYRHRIQNNTMQHFRERFRSCDYLLIDDVQFLSNTDKFQEEFF 221 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 + +N I++ G ++++T D+ P+ ++ L SR G + K++ + K+ ++ + Sbjct: 222 NTFNVIVQEG-GQIVMTSDKAPKLIDKLEKRLKSRFAGGMMTKIESPELDMKINIIKQKC 280 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L L ++ F+ +L +R + T+ + +T+ VK ILK Sbjct: 281 ALNNITLEPNIINFIATQLHDNIREIEGTIIDIYANMSIMNIPITLEIVKNILK 334 >UniRef50_A8F346 Chromosomal replication initiator protein dnaA n=6 Tax=Thermotogaceae RepID=DNAA_THELT Length = 444 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 17/202 (8%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDAVG 75 TF +F G N+ + + + Y ++L G G++HLL A L + + Sbjct: 107 TFENFVVGPNNMFAYSTCLEVAKNPGKYNPLFLHGGVGLGKTHLLQAIGHYLFKHEPDMR 166 Query: 76 YVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELWEMAIFDLYN 122 + L F+ E++D ++ + ++ +D+++ + G + +F +N Sbjct: 167 VIYLTSER-FLNELVDSIKKNRVQEFRDKFRNKIDVLLLDDVQFLIGKTGIQTELFHTFN 225 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + GK ++++ DR P+QL L SR G + K++ +E + Q A+L Sbjct: 226 ELYNEGK-QIVVCSDRDPQQLEKFQDRLVSRFQMGVVTKIEKPDEETCFKIAQKMAQLEN 284 Query: 183 FELPEDVGRFLLKRLDREMRTL 204 EL ED+ + + K +R L Sbjct: 285 AELQEDILKLISKNFSDNLRRL 306 >UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1U5_CAPGI Length = 478 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/254 (18%), Positives = 111/254 (43%), Gaps = 36/254 (14%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHSGY----IYLWAREGAGRSHLLHAACAELS 68 L ++ F +F G+++ L + + + G ++++ G G++HL HA E+ Sbjct: 141 LNPNKNFDTFIEGESNRLARSAGKAITERPGGTSFNPLFIFGGVGLGKTHLAHAIGNEIQ 200 Query: 69 QRG-----------DAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 ++ D + + + + + + ++ IDN++ A + Sbjct: 201 EKHPKKRILYIEAEDFTKQYSVAAKNNNRTDFIHFYQQIDVLIIDNVQFFASKPGTQDVF 260 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++N + ++GK +L++T D+ P + L SR WG +LQ + + + LQ Sbjct: 261 FQIFNHLHQNGK-QLILTSDKAPVDIQDVEQRLLSRFKWGLSAELQAPDYQMRKRILQAI 319 Query: 178 ARLRGFELPEDVGRFLLKRLDREMR------------TLF----MTLD----QLDRASIT 217 G E+ E++ ++ + + +R LF +TLD +D+ Sbjct: 320 LYRDGVEMSEEIVDYIAQNVKTNIRELEGVNTSLMAEALFNKKEITLDLAKKAVDKIVKN 379 Query: 218 AQRKLTIPFVKEIL 231 ++++T+ +++EI+ Sbjct: 380 IKKEITVEYIQEIV 393 >UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n=44 Tax=cellular organisms RepID=DNAA_SYNS3 Length = 468 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Query: 46 IYLWAREGAGRSHLLHA-ACAELSQRGDA-VGYVPLDKRTWFVPEVL--DGMEHL----- 96 +++ G G++HL+ A L +A V YV + T + + DGM+ Sbjct: 165 LFICGGVGLGKTHLMQAIGHYRLEIDPEARVFYVSTETFTNDLITAIRKDGMQAFRDRYR 224 Query: 97 --SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 L+ +D+I+ I G E + F +N + ++G+ +++I DRPP Q+ L SR Sbjct: 225 AADLILVDDIQFIEGKEYTQEEFFHTFNALHDAGR-QIVIASDRPPSQIPRLQERLISRF 283 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 G I +Q E ++ LQ +A LP D+ +++ R +R L Sbjct: 284 SMGLIADIQAPDLETRMAILQKKAEQERVALPRDLIQYISGRFTSNIREL 333 >UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n=28 Tax=Neisseriaceae RepID=DNAA_NEIG1 Length = 518 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 14/182 (7%) Query: 46 IYLWAREGAGRSHLLHAACAEL-SQRGDA-VGYVPLDKRT-WFVPEVLDGM--------E 94 +L+ G G++HL+ A EL R DA V Y+ D F+ V + + Sbjct: 218 FFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYK 277 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASR 153 L+ ID+I+ I G + F LYN + K +L++T D P ++ G+ D L SR Sbjct: 278 QYDLLIIDDIQFIKGKDRTMEEFFYLYNH-FHNEKKQLILTCDVLPAKIE-GMDDRLKSR 335 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 WG +L+P E ++ LQ +A G + ++ F+ + +R L +++ Sbjct: 336 FSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGA 395 Query: 214 AS 215 +S Sbjct: 396 SS 397 >UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n=4 Tax=Neisseriaceae RepID=D0W8I1_NEILA Length = 559 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 14/182 (7%) Query: 46 IYLWAREGAGRSHLLHAACAEL-SQRGDA-VGYVPLDKRT-WFVPEVLDGM--------E 94 +L+ G G++HL+ A EL R DA V Y+ D F+ V + + Sbjct: 259 FFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYK 318 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASR 153 L+ ID+I+ I G + F LYN + K +L++T D P ++ G+ D L SR Sbjct: 319 QYDLLIIDDIQFIKGKDRTMEEFFYLYNH-FHNEKKQLILTCDVLPAKIE-GMDDRLKSR 376 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 WG +L+P E ++ LQ +A G + ++ F+ + +R L +++ Sbjct: 377 FSWGLTLELEPPELEMRVAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVSA 436 Query: 214 AS 215 +S Sbjct: 437 SS 438 >UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n=4 Tax=Campylobacter RepID=DNAA_CAMC5 Length = 436 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 17/229 (7%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQRGDA 73 TF +F G S+ A L E G IY ++ G G++HLL + +G Sbjct: 106 TFENFVVGG-SNEYAFLSAKAASEQPGKIYNPLFIYGPTGLGKTHLLQSVGNFCLNQGKV 164 Query: 74 VGYVPLDK-RTWFVPEVLD-GME-------HLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 V V ++ T F + + ME + ++ ID+++ + + + F +N Sbjct: 165 VICVTSEQFMTDFTYNINNHSMERFREKYRNCDVLLIDDVQFLGKTDKIQEEFFHTFNE- 223 Query: 125 LESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 L S ++++T DR P+ L G D L +R +WG + + P + K+ +Q + Sbjct: 224 LHSKNGQIVMTSDRQPKLLK-GFEDRLRTRFEWGIMADITPPELDTKIAIIQKKCEFDKI 282 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +DV ++ + +R + + L+ + ++++T+ F K +++ Sbjct: 283 YLNKDVINYIATNMGDNIREIESAIINLNAYANLMRQEITLDFAKNVMR 331 >UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n=25 Tax=cellular organisms RepID=C6V4C4_NEORI Length = 598 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 24/235 (10%) Query: 18 TFASFWPGDNSSL-LAALQNVLRQEH-----SGYIYLWAREGAGRSHLLHAAC----AEL 67 TF SF G ++ L A + V S ++L+ G G++HL+HA A Sbjct: 264 TFDSFVVGKSNELAFTASKRVAEAAELPIPGSNPLFLYGGVGLGKTHLMHAIVWHIKANY 323 Query: 68 SQRGDAVGYVPLDKRTWFVPEVLDGMEHLS---------LVCIDNIECIAGDELWEMAIF 118 + R V Y+ +K L + +S ++ +D+++ I+G E + F Sbjct: 324 ADR--RVIYLSAEKFMHKYITALKNKDMMSFKQIFRSVDVLMVDDVQFISGKESTQEEFF 381 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ--L 176 +N ++E K +L+I+ DR P L + SRL WG + + + E ++ L+ L Sbjct: 382 HTFNALIEQNK-QLVISADRSPSDLQGVEERIQSRLSWGLVADINQTTFELRVGILESKL 440 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P+ V F+ + + +R L L+++ S +T+ K++L Sbjct: 441 EQMKSDIVVPKKVVEFMARNIVSNVRELEGALNKVIAHSEITGSVVTVDSAKDLL 495 >UniRef50_Q28TI8 Chromosomal replication initiator DnaA n=1 Tax=Jannaschia sp. CCS1 RepID=Q28TI8_JANSC Length = 233 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 18/186 (9%) Query: 43 SGYIYLWAREGAGRSHLLH----AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSL 98 + + L +G++HL H A++ Q D V + +R P ++ Sbjct: 41 TAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQI---ERLSTAPALV-------- 89 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 I++ E I+ D L E +F ++N + G LLIT PP + LPDLASR+ Sbjct: 90 --IEDAEDISEDALAEEGMFHIHNALSHRGAP-LLITARLPPSRWGTQLPDLASRMAQAG 146 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + +L+ D + + RA R L + F RL+R + ++D +++ Sbjct: 147 LARLEAPDDALLMAVMMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSE 206 Query: 219 QRKLTI 224 +RK ++ Sbjct: 207 KRKPSL 212 >UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n=9 Tax=Cyanobacteria RepID=DNAA_NOSP7 Length = 459 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Query: 98 LVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWG 157 ++ +D+I+ + G E + F +N + E+GK +++I DRPP Q+ L SR G Sbjct: 218 VLLVDDIQFLEGKEYTQEEFFYTFNTLHEAGK-QVVIASDRPPNQIPSLQERLCSRFSMG 276 Query: 158 QIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 I +Q E ++ LQ +A LP DV ++ +R L Sbjct: 277 LIADIQKPDLETRMAILQKKAEDENIRLPRDVIEYIASNYTSNIREL 323 >UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n=14 Tax=Leuconostocaceae RepID=DNAA_OENOB Length = 450 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 40/250 (16%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAACAELSQ-RGD 72 TF ++ GD ++ LA + E G Y ++ G G++HL+ A L + + D Sbjct: 119 TFDTWVIGD-ANELATSAAMAVSEQPGRQYNPLLIYGSSGLGKTHLMEAIGNRLKELQPD 177 Query: 73 A-VGYVPLD-----------KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A V Y+ D K+T + E++ L+ +D+I+ + G + ++ F++ Sbjct: 178 AIVRYITTDDFMNDWVNAISKKT--TADFTSTYENVDLLLVDDIQMLQGKDRFQEEFFNI 235 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N+I +S K ++++T D P+ + L SR G Y +Q +L L+ ++ Sbjct: 236 FNKITKSQK-QIVMTSDVLPKDIPGLNARLVSRFMQGVAYDIQKPDFPTRLAILKNKSEE 294 Query: 181 RGFELPEDVGRFLLKRLD---REMRTLFMTLDQLDRA----------------SITAQRK 221 G + + +++D RE+ F TL + RA +IT Q+ Sbjct: 295 VGISIDNQTLTLIAEQIDTNVRELEGAFNTLTLMARAGRPINVSNAQKILEHLNITRQKV 354 Query: 222 LTIPFVKEIL 231 +T+P +++ + Sbjct: 355 ITLPDIQKTV 364 >UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B720 Length = 459 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 22/211 (10%) Query: 12 YLPDDETFASFWPGDNSSLL--AALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQ 69 +L + TF +F G+ + + AAL L+ ++L + G G++HLL+A + + Sbjct: 116 HLSAELTFDNFVVGNCNRIAQNAALAVALKPGTYNPLFLHSNSGLGKTHLLNAIGNYVKK 175 Query: 70 R--GDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWEM 115 + G + Y + FV + ++ + + + ++ ID+I+ IA E Sbjct: 176 KFPGKRILYTNAE---AFVNDYVEAIGNNTIATFNRRYRSVDVLLIDDIQFIANKEGSME 232 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL- 174 F+++N + SGK +++IT D+PP +L L SR G + E L Sbjct: 233 MFFNIFNTLQHSGK-QIVITSDKPPVELKGMENRLVSRFRQGLTVTIDNPEFETAKAILK 291 Query: 175 -QLRARLRGFELPEDVGRFLLKRLDREMRTL 204 ++ +R+ + + E+V F+ ++++R L Sbjct: 292 KKIESRMIDYPIDEEVLDFIASHFNKDVRDL 322 >UniRef50_Q607X3 DnaA domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607X3_METCA Length = 334 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 12/170 (7%) Query: 46 IYLWAREGAGRSHLLHAACAE----------LSQRGDAV-GYVPLDKRTWFVPEVLDGME 94 + +W G G++HLL A E + Q GD + + V E Sbjct: 42 MVIWGAAGLGKTHLLQAIGNERLRLNPAARIVYQSGDGFEADLAAALQQGAVAGFRSRYE 101 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 L+ D+++ +AG + + L++ +LES ++ +++ GDR P + DL +RL Sbjct: 102 SADLLLFDDVQRLAGKVRAQAELVWLFDALLESLRS-IVLAGDRSPYDMTGVAGDLKTRL 160 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTL 204 + G ++P E + L +AR G +LP +V FL +R+ ++ L Sbjct: 161 NLGLSVSIEPPDLETRAAVLMQKARTWGIDLPPEVAFFLGRRIRTDLAEL 210 >UniRef50_B5K4Z6 Chromosomal replication initiator, DnaA n=2 Tax=Octadecabacter antarcticus RepID=B5K4Z6_9RHOB Length = 230 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 22/216 (10%) Query: 20 ASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL 79 A F+ D ++L L + + + + G+G++HL A Q G + Sbjct: 25 ADFFVSDANTLAYVLMQTPQTWSNNNLAIIGPAGSGKTHLARVFAA---QSGATIINAKD 81 Query: 80 DKRTWFVPEVLDGMEHLSLVCIDNIECIAGD-ELWEMAIFDLYNRILESGKTRLLITGDR 138 + +P S V +++ + + D E W +F +YN + +G LL+T Sbjct: 82 VRADTDLPN--------SNVVLEDGDALRTDGEEW---LFHVYNALSRAGFF-LLLTSRL 129 Query: 139 PPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL---PEDVGRFLLK 195 PP + ++ LPDLASRL I + +D L L +L P V FL+K Sbjct: 130 PPARWDIALPDLASRL--STITSVTIDDPDDPLLTAVLLKHFADRQLAPTPNAVA-FLMK 186 Query: 196 RLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L R + +D LDR ++ + LT PFV+ +L Sbjct: 187 HLPRSFNAVRRIVDTLDREALAQSKPLTRPFVRAVL 222 >UniRef50_Q6KIT7 Chromosomal replication initiator protein dnaA n=1 Tax=Mycoplasma mobile RepID=Q6KIT7_MYCMO Length = 462 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 20/213 (9%) Query: 18 TFASFWPGD-NSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAE-LSQRGDA 73 TF + D N +L A++NV +QE + I++ + G G++HLLHA E L + + Sbjct: 124 TFENLVECDFNKDVLRAIKNVYKQEEIIFNPIFIHSNSGLGKTHLLHALGNEILKESNKS 183 Query: 74 VGYVPLD---KRTWFV-----PEVLDGMEHL----SLVCIDNIECIAGDELWEMAIFDLY 121 V Y+ D ++ F+ E L+ ++ ++ D+++ E+ +FD+ Sbjct: 184 VVYINPDLITQKMVFLMQKGNNEELENLKSFYKNADVLLFDDVQNYKNKEVILKIVFDII 243 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED---KLQALQLRA 178 N LE K +++I D+ P +L +R G ++ S D L+ L ++ Sbjct: 244 NNSLEQQK-QIVICSDKKPDELGGFEQRFITRFKSGLTLGMKKASINDLKTILKFLVIKE 302 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 +L + E+ F+ K +R L L+++ Sbjct: 303 KLNPDKWEEESYEFVAKNHSNSIRDLIGALNKV 335 >UniRef50_Q0AQ96 Regulatory inactivation of DnaA Hda protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AQ96_MARMM Length = 230 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 19/234 (8%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 M+ Q++L L D + A+F G ++ AA ++VL + + L EGAG+S Sbjct: 3 MSMTPQMALDLPARQDFSAAAFIAGPSN---AAARDVLGRPDDWPRNVMALIGPEGAGKS 59 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HL AA Q+ + L R L +E + +++++ D+ A+ Sbjct: 60 HL--AAIWAGRQQALVLPASTLGDR-------LAALEPDCAMVVEDVDQGVDDD----AL 106 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F L+NR E LL+T P + +PDL SRL L D + L+ + Sbjct: 107 FHLFNRAAEGAIPALLLTARTRPAHWTVSVPDLVSRLRALVHVDLHEADDVLLTRVLEKQ 166 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG + V +LL R++R + + + +++D+ ++ + +T +EIL Sbjct: 167 LADRGAPVRPGVIDYLLPRMERSVAAVRILAERMDKLALVKKTPITRAIAREIL 220 >UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KA42_THENN Length = 450 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 21/164 (12%) Query: 18 TFASFW--PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGD--A 73 TF +F PG++ + A+L+ ++++ G G++HLL + + QR Sbjct: 113 TFENFVVGPGNSFAYHASLEVAKNPGKYNPLFIYGGVGLGKTHLLQSIGNYIVQREPDLR 172 Query: 74 VGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ +K F+ +++D M+ + ++ ID+I+ + G + +F Sbjct: 173 VMYITSEK---FLNDLVDSMKEGKLAEFREKYRKKVDVLLIDDIQFLIGKTGVQTELFHT 229 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 +N + +SGK +++I DR P L L SR G + KL+P Sbjct: 230 FNELHDSGK-QIVICSDREPHMLKEFQDRLISRFQMGLVAKLEP 272 >UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n=4 Tax=Lactococcus lactis RepID=DNAA_LACLM Length = 454 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 94/205 (45%), Gaps = 21/205 (10%) Query: 24 PGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAE-LSQRGDA-VGYVPL 79 PG+ +L AA+ V + Y ++++ G G++HL+HA + L+ A + YV Sbjct: 130 PGNRWTLAAAIA-VADKPGDTYNPLFIYGGAGLGKTHLMHAIGNQILTDNPTARIKYVSS 188 Query: 80 DKRTWFVPEVLDGMEHLSLVCIDN------------IECIAGDELWEMAIFDLYNRILES 127 + FV + ++ + +N ++ + E + F+ +N + + Sbjct: 189 EN---FVNDYVNATRKNQMESFENTYRNLDLLLLDDVQFFSDKEGTKNEFFNTFNALYDK 245 Query: 128 GKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPE 187 G +++++T DR P++LN L SR WG + E ++ L +++ E P Sbjct: 246 G-SQIVLTSDRIPQELNNLEDRLVSRFSWGLTTDITAPDYETRMAILLIKSESSHLEFPS 304 Query: 188 DVGRFLLKRLDREMRTLFMTLDQLD 212 + ++ ++D +R L L++++ Sbjct: 305 ETLSYIAGQIDSNVRELEGALNRVE 329 >UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n=11 Tax=Lactobacillus RepID=DNAA_LACRD Length = 440 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 12/198 (6%) Query: 46 IYLWAREGAGRSHLLHAACAELSQRG--DAVGYVPLDK---------RTWFVPEVLDGME 94 ++++ G G++HL+ A + Q V YV + R ++ + Sbjct: 141 LFIYGGVGLGKTHLMEAIGNHMLQVNPNSRVKYVTSEDFTNDYINAIRNNTTEQLREEYR 200 Query: 95 HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL 154 +L L+ ID+I+ +A E ++ F+ +N L K ++++T DR P ++ L SR Sbjct: 201 NLDLLLIDDIQFLANKEGTQLEFFNTFN-ALHDRKKQIVMTSDRIPNEIPELQDRLVSRF 259 Query: 155 DWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 WG ++ P E ++ L+ + ++ D ++ ++D +R L L ++ Sbjct: 260 RWGLTVEITPPDLETRIAILRSKVEEDHIDIGNDTLNYIAGQIDTNIRELEGALTKVQAF 319 Query: 215 SITAQRKLTIPFVKEILK 232 + + ++T + LK Sbjct: 320 ANLSGERITPSLASQALK 337 >UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n=35 Tax=Francisella RepID=DNAA_FRAP2 Length = 491 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 21/244 (8%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLL--AALQNVLR--QEHSGYIYLWAREGAGRSHLLH 61 + S L L + F SF GD + + AA+Q + + H+ ++++ G G++HL+ Sbjct: 149 EYSFGLPLKEKYVFDSFVVGDANKIARAAAMQVSINPGKLHNP-LFIYGGSGLGKTHLMQ 207 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGME------------HLSLVCIDNIECIAG 109 A ++ + + F+ + ++ + ++ ID+I+ IAG Sbjct: 208 A-IGNHAREVNPNARIIYTNSEQFIKDYVNSIRLQDQDEFQRVYRSADILLIDDIQFIAG 266 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDE 168 E F +N + E+GK ++++T D+ P ++ GL + L SR +G + E Sbjct: 267 KEGTAQEFFHTFNALYENGK-QIILTSDKYPNEIE-GLEERLVSRFGYGLTVSVDMPDLE 324 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L +A G +LP + F+ + + +R L L+++ S + TI + Sbjct: 325 TRIAILLKKAHDLGQKLPNETAAFIAENVRTNVRELEGALNRVLTTSKFNHKDPTIEVAQ 384 Query: 229 EILK 232 L+ Sbjct: 385 ACLR 388 >UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEK1_9BACT Length = 460 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL- 67 L D TF +F G + L + + +E +L+ G G++HL++A + Sbjct: 126 LNRDYTFKAFVEGRANKLARVIGLAIAKEPGKPAFNPFFLYGPSGVGKTHLVNAIGLRIL 185 Query: 68 -SQRGDAVGYVPLD-KRTWFVPEVLDGM--------EHLSLVCIDNIECIAGDELWEMAI 117 SQ V YVP +T + VL + + ++ ID+I+ I + + A Sbjct: 186 ESQPERRVLYVPAHLFKTQYTDSVLHNTINDFIHFYQTIDVLIIDDIQEITTAKT-QQAF 244 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++N + ++G+ +++IT DR P + +R WG + +++ + L + Sbjct: 245 FHIFNHLQQNGR-QIIITCDRAPVDFEGIEERMLTRFKWGTVTEMEKPDVALRRAILTAK 303 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTL 204 + G + P DV ++ ++ +R L Sbjct: 304 IKRDGLKFPPDVIDYIANNVESSVREL 330 >UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRP4_DESOH Length = 460 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 31/238 (13%) Query: 5 AQLSLPLY---------LPDDETFASFWPGDNS--SLLAALQNVLRQEHSG-YIYLWARE 52 AQL+LP L D TF +F G+++ + A L RQ+ G ++L +R Sbjct: 106 AQLTLPSVQVKPATGRVLKADYTFDNFVVGNHNDFAYTAVLSLGARQQSGGRSLFLSSRP 165 Query: 53 GAGRSHLLHAACAEL--SQRGDAVGYVPLDKRTWFVPEVLDGMEHLS------------- 97 G G+SHL A + +Q G V Y ++ F E++ S Sbjct: 166 GMGKSHLAQALGHQTIKAQPGCRVYYTTVED---FSNEMVYAYTTKSSGAFKKKYRTGFD 222 Query: 98 LVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWG 157 ++ ID+I +AG + + + + + +LE+ + ++L G P ++ L SRL G Sbjct: 223 MLLIDDIHALAGKDRTQEELAMVVDYMLEADR-KVLFAGCCLPGEIPKMNDQLKSRLSCG 281 Query: 158 QIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 I ++ +++ L+ +AR G+ +P D+ +L L ++R L L L S Sbjct: 282 LITTMETPDFTTRVRILEKKARFYGYAVPRDILEYLADVLTEDVRQLESGLANLATKS 339 >UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3K6_FLAB3 Length = 488 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/242 (19%), Positives = 115/242 (47%), Gaps = 18/242 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY----IYLWAREGAGRSHLLH 61 ++++ L D +F ++ G+++ + + + + ++L+ G G++HL H Sbjct: 145 KINIDSNLKADFSFDNYVEGESNKFASTVARSIAKRPGATAFNPLFLYGGYGVGKTHLGH 204 Query: 62 AACAEL--SQRGDAVGYVPLDKRTW-FVP--------EVLDGMEHLSLVCIDNIECIAGD 110 A E+ S V Y+ +K FV E + + + ++ ID+I+ ++G Sbjct: 205 AVGLEVKNSYPDKVVLYLSSEKFIQQFVSAAKAHKQTEFANFYQMVDVLIIDDIQFLSGK 264 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD-LASRLDWGQIYKLQPLSDED 169 + + + F +++ + ++GK ++++T D+ P + L + D + SR WG +++ + Sbjct: 265 KSTQDSFFHIFDYLHQNGK-QIILTSDKAPVDI-LDIQDRIVSRFKWGLSAEIKSPDFDT 322 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 + + + + G L ED+ FL + +R L ++ + S + +L++ +KE Sbjct: 323 RRKIIVDKLSRDGIVLTEDMLDFLASEVKTNVRELIGVINSVIAYSTVYKSELSLELLKE 382 Query: 230 IL 231 + Sbjct: 383 TI 384 >UniRef50_UPI0000D537C1 Chromosomal replication initiator protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D537C1 Length = 393 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 13/160 (8%) Query: 16 DETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRGDA 73 ++ F +F + L + + + Y +Y++ G G++HLL+A EL R Sbjct: 125 NKRFENFITSSCNKLAFEASTKITENSTQYNPLYIYGGVGMGKTHLLNAIGYELKNRS-K 183 Query: 74 VGYVPLDKRTW-FVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 V ++ ++ + FV + ++ ID+I+ + G E + F +N + Sbjct: 184 VMFISAERFMYQFVKAIKSNDMVKFKEYFRDTDVLLIDDIQFMNGKEAMQEEFFHTFNAL 243 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 L+ G +++++T DR P +L + SR G + +Q Sbjct: 244 LDKG-SKIVLTSDRAPNKLARMQERIKSRFSGGLVVDIQK 282 >UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=2 Tax=Rothia mucilaginosa RepID=D2NQA7_9MICC Length = 564 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 20/219 (9%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHA--ACAELSQRG 71 TF +F G S+ A E G +Y ++ G G++HLLHA + Sbjct: 225 TFDTFVIG-QSNRFAHASAFAVAEQPGIVYNPLFIYGGSGLGKTHLLHAIGHYTKYLYPN 283 Query: 72 DAVGYVPLDKRTW-FVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 V YV ++ T F+ + D ++ ++ ID+I+ +AG E F +N Sbjct: 284 LRVRYVNSEEFTNDFINSIRDDEGSSFKQIYRNVDVLLIDDIQFLAGKEATMEEFFHTFN 343 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + K +++IT D PP+QL + SR G +QP E ++ L+ +A+ Sbjct: 344 ALYNHQK-QIVITSDLPPKQLTGFAERMRSRFGSGLNVDVQPPELETRIAILRKKAQNEI 402 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 + +DV ++ + +R L L RAS A K Sbjct: 403 LPVRDDVMEYIASHVTANIREL---EGALIRASAAASMK 438 >UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHM2_9RHIZ Length = 506 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 24/216 (11%) Query: 18 TFASFWPGDNSSLLAA----LQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQRG 71 TF SF G ++ + A + + + GY +Y+ + G G+SHLL A E+ +R Sbjct: 168 TFDSFVVGASNRMAHAGATQVAETVLTDAPGYNPLYIHSAVGLGKSHLLQAIAWEVKRRA 227 Query: 72 DA--VGYVPLDKRTWFVPEVL---------DGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + V Y+ ++ + E L + ++ ++ ID++E + G E E + Sbjct: 228 PSAQVLYLTAERFRYQFVEALRSSDPLAFKERFRNIHMLLIDDLEFLQG-ERTEQEFDHI 286 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL-----Q 175 N +L+ GK ++++ R P Q+ + SRL G + +L PL E +L+ L + Sbjct: 287 INALLDGGK-QVVVASARAPNQIERLNERMRSRLQRGLVTELIPLDHELRLKVLEKRLGE 345 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 RA F L DV L RL R L + +L Sbjct: 346 KRAADPSFTLSRDVVDLLAMRLTENGRELEGAITRL 381 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteoba... 306 5e-82 UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n... 302 6e-81 UniRef50_C4K7F6 Regulatory factor involved in inactivation of Dn... 300 2e-80 UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n... 299 4e-80 UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n... 298 1e-79 UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n... 291 1e-77 UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n... 291 2e-77 UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (... 290 4e-77 UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n... 287 2e-76 UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n... 285 9e-76 UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n... 284 1e-75 UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n... 284 2e-75 UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n... 283 3e-75 UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n... 283 4e-75 UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n... 282 5e-75 UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n... 282 5e-75 UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n... 281 1e-74 UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n... 281 1e-74 UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n... 280 3e-74 UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n... 278 1e-73 UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n... 276 6e-73 UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n... 275 9e-73 UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n... 274 2e-72 UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesa... 273 3e-72 UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n... 273 4e-72 UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n... 273 5e-72 UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n... 272 7e-72 UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n... 271 1e-71 UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n... 271 2e-71 UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n... 270 4e-71 UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n... 269 5e-71 UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n... 269 7e-71 UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 ... 268 9e-71 UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n... 268 1e-70 UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n... 268 1e-70 UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n... 267 2e-70 UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n... 267 2e-70 UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n... 267 2e-70 UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n... 267 2e-70 UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n... 267 3e-70 UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n... 267 3e-70 UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n... 266 5e-70 UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n... 265 6e-70 UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n... 265 8e-70 UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n... 265 9e-70 UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n... 265 1e-69 UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n... 264 1e-69 UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n... 264 2e-69 UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n... 264 2e-69 UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=... 263 3e-69 UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_UPI000185BFFA chromosomal replication initiator protein... 262 5e-69 UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n... 262 8e-69 UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n... 261 1e-68 UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n... 261 1e-68 UniRef50_UPI0001BCD63C chromosomal replication initiation protei... 261 1e-68 UniRef50_C7M114 Chromosomal replication initiator protein dnaA n... 261 1e-68 UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n... 261 2e-68 UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n... 260 2e-68 UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria... 260 2e-68 UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n... 260 2e-68 UniRef50_A7BAR9 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_C7H083 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n... 259 4e-68 UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n... 259 5e-68 UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n... 259 5e-68 UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n... 259 6e-68 UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=... 259 7e-68 UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n... 258 2e-67 UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n... 257 2e-67 UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein... 257 2e-67 UniRef50_UPI0001C36FC2 chromosomal replication initiation protei... 256 4e-67 UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n... 256 4e-67 UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n... 255 7e-67 UniRef50_A8YW41 Chromosomal replication initiator protein dnaA n... 255 8e-67 UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n... 255 8e-67 UniRef50_B0S416 Chromosomal replication initiator protein dnaA n... 255 1e-66 UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n... 255 1e-66 UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n... 254 1e-66 UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepI... 254 2e-66 UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n... 253 2e-66 UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n... 253 3e-66 UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n... 253 3e-66 UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n... 253 5e-66 UniRef50_Q83NZ5 Chromosomal replication initiator protein dnaA n... 252 8e-66 UniRef50_Q1GC43 Chromosomal replication initiator protein dnaA n... 252 8e-66 UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n... 251 2e-65 UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n... 250 2e-65 UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n... 250 2e-65 UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultur... 250 3e-65 UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermane... 250 3e-65 UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n... 250 3e-65 UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n... 249 5e-65 UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n... 249 5e-65 UniRef50_A7H675 Chromosomal replication initiator protein dnaA n... 249 5e-65 UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n... 249 5e-65 UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n... 249 7e-65 UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n... 249 8e-65 UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n... 248 1e-64 UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n... 248 1e-64 UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n... 248 1e-64 UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine ... 248 1e-64 UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n... 248 1e-64 UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 ... 248 2e-64 UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwell... 247 2e-64 UniRef50_A3EQC2 Chromosomal replication initiator protein dnaA n... 247 2e-64 UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n... 247 2e-64 UniRef50_B2V628 Chromosomal replication initiator protein dnaA n... 247 3e-64 UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n... 246 5e-64 UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n... 246 5e-64 UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n... 246 5e-64 UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n... 244 2e-63 UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n... 244 2e-63 UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n... 243 3e-63 UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 ... 243 4e-63 UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n... 243 4e-63 UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n... 243 6e-63 UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n... 242 8e-63 UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteu... 241 1e-62 UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n... 241 2e-62 UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsul... 241 2e-62 UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n... 240 2e-62 UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitroco... 239 5e-62 UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n... 239 6e-62 UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n... 239 6e-62 UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n... 239 7e-62 UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n... 238 1e-61 UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 ... 238 1e-61 UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 ... 238 1e-61 UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n... 238 1e-61 UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n... 238 2e-61 UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 ... 237 2e-61 UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n... 237 3e-61 UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis K... 236 3e-61 UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 ... 236 4e-61 UniRef50_Q3IIL0 Putative regulatory factor involved in inactivat... 236 5e-61 UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n... 235 8e-61 UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n... 235 8e-61 UniRef50_C8N934 Chromosomal replication initiator protein dnaA n... 235 9e-61 UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n... 234 1e-60 UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reineke... 233 3e-60 UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiell... 233 5e-60 UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax... 232 1e-59 UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n... 231 1e-59 UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochro... 231 2e-59 UniRef50_B1MW29 Chromosomal replication initiator protein dnaA n... 231 2e-59 UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n... 231 2e-59 UniRef50_B9Y5K6 Chromosomal replication initiator protein dnaA n... 230 3e-59 UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n... 229 4e-59 UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n... 229 4e-59 UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n... 228 1e-58 UniRef50_C8P211 Chromosomal replication initiator protein dnaA n... 228 2e-58 UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n... 227 2e-58 UniRef50_UPI0001C311AD chromosomal replication initiator protein... 227 2e-58 UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n... 227 2e-58 UniRef50_A8F346 Chromosomal replication initiator protein dnaA n... 226 4e-58 UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n... 226 4e-58 UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 226 5e-58 UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n... 226 7e-58 UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n... 225 8e-58 UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n... 223 3e-57 UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n... 223 5e-57 UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n... 222 6e-57 UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosom... 222 7e-57 UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n... 222 9e-57 UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n... 221 1e-56 UniRef50_Q2Y5R8 Regulatory inactivation of DnaA Hda protein n=1 ... 221 2e-56 UniRef50_Q1V1G7 Chromosomal replication initiator protein dnaA n... 221 2e-56 UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n... 221 2e-56 UniRef50_A4ACL3 DnaA-like protein hda n=1 Tax=Congregibacter lit... 221 2e-56 UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n... 219 4e-56 UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n... 217 3e-55 UniRef50_A3WKV5 ATPase involved in DNA replication initiation n=... 216 6e-55 UniRef50_B9ZM52 DnaA regulatory inactivator Hda n=1 Tax=Thioalka... 215 8e-55 UniRef50_Q1YP64 DnaA family protein n=1 Tax=gamma proteobacteriu... 215 1e-54 UniRef50_B4X369 Chromosomal replication initiator protein DnaA n... 214 2e-54 UniRef50_B8KF04 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 214 2e-54 UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n... 214 2e-54 UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothio... 213 3e-54 UniRef50_UPI0000D537C1 Chromosomal replication initiator protein... 213 4e-54 UniRef50_C3JBQ8 Chromosomal replication initiator protein dnaA n... 212 6e-54 UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n... 212 9e-54 UniRef50_O66659 Chromosomal replication initiator protein dnaA n... 211 1e-53 UniRef50_A1TZ76 Regulatory inactivation of DnaA Hda protein n=3 ... 211 2e-53 UniRef50_B2UL60 Chromosomal replication initiator protein dnaA n... 210 3e-53 UniRef50_B4RZX5 Chromosomal replication initiator, DnaA like pro... 209 4e-53 UniRef50_C1DC86 DnaA-related protein n=3 Tax=Neisseriaceae RepID... 209 6e-53 UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n... 209 6e-53 UniRef50_B4U623 Chromosomal replication initiator protein dnaA n... 207 2e-52 UniRef50_A0LE53 Chromosomal replication initiator protein dnaA n... 207 3e-52 UniRef50_Q0ADW8 Regulatory inactivation of DnaA Hda protein n=2 ... 206 3e-52 UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n... 206 4e-52 UniRef50_B8GWW5 Chromosomal replication initiator protein dnaA n... 206 4e-52 UniRef50_B7IF65 Chromosomal replication initiator protein dnaA n... 206 7e-52 UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 ... 205 9e-52 UniRef50_C4KUE4 DnaA regulatory inactivator Hda n=66 Tax=Betapro... 204 2e-51 UniRef50_A4GJ90 Putative DNA replication factor n=1 Tax=uncultur... 204 2e-51 UniRef50_C5V5E1 DnaA regulatory inactivator Hda n=2 Tax=Betaprot... 204 2e-51 UniRef50_A7IB67 Chromosomal replication initiator protein dnaA n... 203 3e-51 UniRef50_A6LIY2 Chromosomal replication initiator protein dnaA n... 202 1e-50 UniRef50_B8FFL8 Chromosomal replication initiator protein dnaA n... 200 2e-50 UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n... 200 3e-50 UniRef50_A9LYZ8 DnaA-related protein n=28 Tax=Neisseriaceae RepI... 199 7e-50 UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n... 199 7e-50 UniRef50_A6T215 Uncharacterized conserved protein n=6 Tax=Betapr... 198 1e-49 UniRef50_A1WIR8 Chromosomal replication initiator, DnaA n=19 Tax... 196 4e-49 UniRef50_C6WT64 DnaA regulatory inactivator Hda n=1 Tax=Methylot... 196 6e-49 UniRef50_B8KQC7 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 195 9e-49 UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n... 194 2e-48 UniRef50_Q3BQY1 Replication related protein n=20 Tax=Xanthomonad... 192 9e-48 Sequences not found previously or not previously below threshold: UniRef50_C4FYD8 Chromosomal replication initiator protein dnaA n... 261 1e-68 UniRef50_Q03D55 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_D2RCN9 Chromosomal replication initiator protein DnaA n... 248 8e-65 UniRef50_B8DV06 Chromosomal replication initiator protein dnaA n... 247 2e-64 UniRef50_D2RMT3 Chromosomal replication initiator protein DnaA n... 244 1e-63 UniRef50_C5NVU9 Chromosomal replication initiator protein dnaA n... 242 8e-63 UniRef50_O87546 Chromosomal replication initiator protein dnaA n... 238 2e-61 UniRef50_Q1PVD7 Chromosomal replication initiator protein dnaA n... 233 3e-60 UniRef50_D1AIS7 Chromosomal replication initiator protein dnaA n... 227 2e-58 UniRef50_C7MEK7 Chromosomal replication initiator protein dnaA n... 224 2e-57 UniRef50_B7J203 Chromosomal replication initiator protein dnaA n... 223 4e-57 UniRef50_D0GPF1 Chromosomal replication initiator protein dnaA n... 223 5e-57 UniRef50_C5R9Y2 Chromosomal replication initiator protein dnaA n... 222 6e-57 UniRef50_D1W4X4 Chromosomal replication initiator protein dnaA n... 219 5e-56 UniRef50_B0N234 Chromosomal replication initiator protein dnaA n... 219 6e-56 UniRef50_A9NE65 Chromosomal replication initiator protein dnaA n... 213 4e-54 UniRef50_C9LP67 Chromosomal replication initiator protein dnaA n... 211 1e-53 UniRef50_C2MAU1 Chromosomal replication initiator protein dnaA n... 211 2e-53 UniRef50_D1BQ77 Chromosomal replication initiator protein dnaA n... 209 6e-53 UniRef50_Q2NKC5 Chromosomal replication initiator protein dnaA n... 209 7e-53 UniRef50_UPI0000D52F8F chromosomal replication initiator protein... 208 1e-52 UniRef50_B7CCH8 Chromosomal replication initiator protein dnaA n... 206 5e-52 UniRef50_A8RAI5 Chromosomal replication initiator protein dnaA n... 205 8e-52 UniRef50_Q6MEG8 Chromosomal replication initiator protein dnaA 2... 204 1e-51 UniRef50_P34028 Chromosomal replication initiator protein dnaA n... 203 5e-51 UniRef50_A8UU23 Chromosomal replication initiator protein dnaA n... 202 7e-51 UniRef50_D2MMX3 Chromosomal replication initiator protein DnaA n... 199 7e-50 UniRef50_A6C0G2 Chromosomal replication initiator protein dnaA n... 193 3e-48 UniRef50_B2S1V1 Chromosomal replication initiator protein dnaA n... 192 7e-48 >UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteobacteria RepID=HDA_PROMH Length = 248 Score = 306 bits (784), Expect = 5e-82, Method: Composition-based stats. Identities = 180/233 (77%), Positives = 211/233 (90%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +NTP+QLSLPL LPDDETF SF+ G+N+SL+AA+Q + Q H YIY W+R+G G+SHLL Sbjct: 16 LNTPSQLSLPLSLPDDETFDSFYAGENASLVAAIQTAIHQSHGSYIYFWSRDGGGKSHLL 75 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACAELS GDAVGYVPLDKR +FVP+VL+GMEHLSLVCIDN++CIAGDE WE+A+F+L Sbjct: 76 HAACAELSLAGDAVGYVPLDKRAYFVPDVLEGMEHLSLVCIDNVQCIAGDEEWELALFNL 135 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+LE G+T LLITGDRPPRQ++L LPDLASRLDWGQIY+LQPLSDE+K+QALQLRA+L Sbjct: 136 YNRVLELGRTCLLITGDRPPRQIDLQLPDLASRLDWGQIYRLQPLSDEEKIQALQLRAKL 195 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPEDVGRF+LKRLDR+MRTLF LD+LD ASI AQRKLTIPFVK+ILKL Sbjct: 196 RGFELPEDVGRFVLKRLDRKMRTLFEMLDELDHASIVAQRKLTIPFVKDILKL 248 >UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n=19 Tax=Firmicutes RepID=DNAA_CLONN Length = 448 Score = 302 bits (774), Expect = 6e-81, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 111/234 (47%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G+++ A + + + ++++ G G++HL+HA + Q Sbjct: 111 LNPKYTFDSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHYILQ 170 Query: 70 R--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV +K T + E + ++ ++ ID+I+ IAG E + F Sbjct: 171 NTPNAKVVYVSSEKFTNELINSIKDDKNEEFRNKYRNVDVLLIDDIQFIAGKERTQEEFF 230 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K +++++ DRPP+++ L SR +WG I +Q E ++ L+ +A Sbjct: 231 HTFNALYEADK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETRIAILKKKA 289 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++P +V ++ ++ +R L L ++ S R++++ E LK Sbjct: 290 DVENLDIPNEVMVYIATKIKSNIRELEGALIRIVAYSSLTNREISVDLAAEALK 343 >UniRef50_C4K7F6 Regulatory factor involved in inactivation of DnaA n=4 Tax=Enterobacteriaceae RepID=C4K7F6_HAMD5 Length = 246 Score = 300 bits (770), Expect = 2e-80, Method: Composition-based stats. Identities = 169/233 (72%), Positives = 200/233 (85%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +N P QL LPL+LPDD TF+ F+PGDNS+LLAA+++ L H YIY W+++G+GRSHLL Sbjct: 14 LNNPTQLPLPLFLPDDATFSGFYPGDNSALLAAIESALCDSHGRYIYFWSKQGSGRSHLL 73 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAAC+ LS++G AVGYVPLDKR +F EVL+GME L+L+CIDNIE I GD WEM IF L Sbjct: 74 HAACSTLSKQGKAVGYVPLDKRAYFTVEVLEGMEQLALICIDNIEHIVGDIEWEMGIFHL 133 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNRILE T LL+TGDRPPRQL+L LPDLASRLDWGQIYKLQPLSD+DK+ +LQLRA+L Sbjct: 134 YNRILEKDHTCLLMTGDRPPRQLHLHLPDLASRLDWGQIYKLQPLSDDDKVLSLQLRAKL 193 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPE+VGRF+LKRLDREM +LFM LD+LD+ASI AQRKLTIPFVKEIL+L Sbjct: 194 RGFELPEEVGRFMLKRLDREMPSLFMALDRLDKASIRAQRKLTIPFVKEILRL 246 >UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n=13 Tax=Clostridiales RepID=DNAA_CLOK1 Length = 451 Score = 299 bits (767), Expect = 4e-80, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G+++ A + + + ++++ G G++HL+HA + Sbjct: 114 LNPKYTFTSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHHILH 173 Query: 70 RGDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + V YV +K T + E ++ ++ ID+I+ IAG E + F Sbjct: 174 NNTSCKVVYVSSEKFTNELINSIKDDKNVEFRSKYRNIDVLLIDDIQFIAGKERTQEEFF 233 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K +++++ DRPP+++ L SR +WG I +QP E ++ L+ +A Sbjct: 234 HTFNALYEANK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQPPDFETRMAILKKKA 292 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +P +V ++ ++ +R L L ++ S +++++ E LK Sbjct: 293 DVEKLNIPNEVMAYIATKIKSNIRELEGALIRIVAFSSLTNKEISVDLAIEALK 346 >UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_ALKOO Length = 451 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G+++ A + + + ++L+ G G++HL+HA + Sbjct: 114 NLNPKYTFDTFVIGNSNRFAHAASLAVAESPAKAYNPLFLYGGVGLGKTHLMHAIGHFIL 173 Query: 69 QRGDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q V YV + T + E + + ++ +D+I+ IAG E + Sbjct: 174 QNNPKAKVVYVSSETFTNELINSIRHDRNVEFRNRFRTIDVLLVDDIQFIAGKESTQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ES K +++I+ DRPP+++ L SR +WG I +QP E ++ L + Sbjct: 234 FHTFNALHESNK-QIIISSDRPPKEIPTLEDRLRSRFEWGLITDIQPPDLETRIAILYKK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A++ ++P +V + K++ +R L L ++ S ++T+ E LK Sbjct: 293 AQMENIDVPNEVLTHIAKKIQSNIRELEGALIRIVAYSSLTNSEITVELASEALK 347 >UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n=3 Tax=Clostridiales RepID=DNAA_CLOPH Length = 453 Score = 291 bits (745), Expect = 1e-77, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 17/237 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 YL TF +F G N++L A + + + ++++ G G++HL+H+ + Sbjct: 112 YLNPRYTFDTFVVGANNNLAHAASLAVAESPAEIYNPLFIYGGVGLGKTHLMHSIAHYIL 171 Query: 69 QRGD--AVGYVPLDKRTW-----------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 ++ V YV +K T E + ++ ++ ID+I+ I G E + Sbjct: 172 EQNPNSKVLYVTSEKFTNELIESIRNADTTPTEFREKYRNIDVLLIDDIQFIIGKERTQE 231 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + ES K +++I+ D+PP+ + L SR +WG +Q E ++ L+ Sbjct: 232 EFFHTFNTLHES-KKQIIISSDKPPKDILTLEERLRSRFEWGLTVDIQSPDYETRMAILK 290 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L + ++V +++ + +R L L ++ S ++++ + +E LK Sbjct: 291 KKEELDCLTIDDEVMKYIASNIKSNIRELEGALTKIVALSRLKKKEVDVILAEEALK 347 >UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n=2 Tax=Synergistaceae RepID=C9M5P8_9BACT Length = 443 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 15/239 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAAC 64 P L + F+SF G ++ L A + +++W G G++HL+HA Sbjct: 104 PSPTGLNPNYKFSSFVVGRSNRLAHAASLAVADNPGSAYSPLFIWGGVGLGKTHLMHAIG 163 Query: 65 AELSQRGDA--VGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + V YV +K T E H+ L+ ID+I+ IAG E Sbjct: 164 HHALAQNPRLRVTYVSSEKFTNELITAIKNNKTAEFRSKYRHMDLLLIDDIQFIAGKEST 223 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F +N + ++ K +++++ DRPP++++ L SR +WG + +Q E ++ Sbjct: 224 QEEFFHTFNTLHDN-KKQIVLSSDRPPKEISDIEERLVSRFEWGLVTDIQQPDYETRIAI 282 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+ +A R + LP++V +L + + +R L +L+++ + + ++T+ E LK Sbjct: 283 LKKKAESRNYPLPDEVAAYLAQNIPSNIRELEGSLNRVIACAELSSEQITVERAVEWLK 341 >UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (Fragment) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP64_9BACT Length = 399 Score = 290 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + F+SF G ++ L A + + +++W G G++HL+HA Sbjct: 64 GLNPNYLFSSFVVGKSNRLAHAASLAVAESPGAAYNPLFIWGGVGLGKTHLMHAIGHHAL 123 Query: 69 Q--RGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q R VGYV +K T E + L+ ID+I+ +AG E + Sbjct: 124 QNDRNLKVGYVSSEKFTNELITSIKNNRTAEFRARYRTMDLLLIDDIQFLAGKESTQEEF 183 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + GK +++++ DRPP+ + L SR +WG + +Q E ++ L + Sbjct: 184 FHTFNSLHD-GKKQIVLSSDRPPKDIKSIEDRLVSRFEWGLVTDIQSPDYETRIAILTKK 242 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A R + +PEDV +L + + +R L L+++ + +T+ E LK Sbjct: 243 AEFRNYPMPEDVINYLAQNVPSNIRELEGALNRVIACAELNSEPVTVENTSEWLK 297 >UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N7_COPPD Length = 543 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 + L TF F GD++ L A + + +++W G G++HLLHA L Sbjct: 204 IRLNPRYTFDEFVVGDSNRLAYAGARAVAENPGKRFNPLFIWGGVGLGKTHLLHAIGNYL 263 Query: 68 SQR---GDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEM 115 Q+ V Y+ ++ T + E + ++ ID+I+ IAG E + Sbjct: 264 LQQQEPDMQVLYITAEEFTNEMVESIKKNSPEDFRAHYRTVDVLLIDDIQFIAGKEATQT 323 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + ++GK +++IT D PP++L L L SR G +Q E ++ L+ Sbjct: 324 EFFHTFNTLYQAGK-QIVITSDHPPQELTLLEDRLRSRFQQGLTVDIQRPDFETRVAILE 382 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A+ G ++P +V F+ + +R L L ++ + +T+ K+ L Sbjct: 383 RKAQKEGLDVPSEVIEFIAHAVATNIRELEGALTKVTALATLQNVPMTLGLAKQAL 438 >UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJZ7_RHOM4 Length = 503 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 16/238 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACA 65 L TF F GD + L + + Q+ ++ G G++HL+ A Sbjct: 161 DSQLDPKYTFERFIEGDCNRLARSAALAIAQQPGATSFNPFLVYGGVGLGKTHLIQAIGN 220 Query: 66 ELSQRG--DAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 Q + + YV ++ T + E H+ L+ +D+I+ G E + Sbjct: 221 YARQHHTAETIRYVSSEQFTNEFVQAIQHNRINEFSLFYRHIDLLIVDDIQFFGGKEKTQ 280 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK +++++ DRPP+ + L SR WG + +QP E ++ L Sbjct: 281 EEFFHIFNALHQTGK-QIVLSADRPPKDIPGIEERLLSRFQWGLMADVQPPDLETRIAIL 339 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +A G EL +DV F+ + R L L +L + +R + + +E L+ Sbjct: 340 RRKAEDEGIELGDDVIEFIAHHVKSNFRELEGALLRLVAHAAYQRRDIDLALAREALR 397 >UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOSM Length = 460 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF SF G ++ A + + + ++++ G G++HL++A + Sbjct: 124 NLNPKYTFESFVSGPSNQFAYAASQAVANKPATNYNPLFIYGGVGLGKTHLVNAIGNHIL 183 Query: 69 QRGDAVG--YVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + Y +K + E + + L+ ID+I+ +AG E + Sbjct: 184 AKNPKAKICYYSSEKFMNEMINSLRYKKMDEFRNKFRKMDLLLIDDIQFMAGKEATQEEF 243 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ES K ++++T D+ P+ + L SR +WG I +QP E K+ L+ + Sbjct: 244 FHTFNALYESHK-QIVVTSDKFPKDIPGLEERLRSRFEWGLIADIQPPGVETKVAILKKK 302 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + LP+DV FL + + +R L L +L+ + +++T+ +E++K Sbjct: 303 SDMHAVNLPDDVALFLAEGANSNIRELEGMLIRLEAFASLTGQEITLSMAREVMK 357 >UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n=258 Tax=Bacteria RepID=DNAA_EXIS2 Length = 464 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G + A + + + ++++ G G++HL+HA + Sbjct: 126 QLNEKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGQYVQ 185 Query: 69 QR--GDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 + G + YV ++ T F+ + D ++ ++ ID+I+ +AG E + Sbjct: 186 DQKLGTKIAYVSSEQFTNDFINSIRDNKTVQFRNKYRNIDVLLIDDIQFLAGKEQTQEEF 245 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K +++I+ DRPP+++ L SR +WG I + P E ++ L+ + Sbjct: 246 FHTFNALHNDQK-QIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKK 304 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A ++ +V ++ ++D +R L L ++ + R + E L Sbjct: 305 ANAEQLDVSNEVMLYIASQIDTNIRELEGALTRVIAYANLVGRTIDPNVAAEAL 358 >UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNAA_THEYD Length = 438 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 15/241 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQ-NVLRQEH--SGYIYLWAREGAGRSHLLHA 62 Q+ L TF +F G ++ A V ++++ G G++HL+ A Sbjct: 95 QVIKKGNLNPKYTFDTFVVGPSNQFAHAASFRVAENPGFAYNPLFIYGGVGLGKTHLITA 154 Query: 63 ACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDE 111 + + V Y+ ++ T +PE + + + +D+I+ IAG + Sbjct: 155 IGNYILDKKPEMNVCYISSEQFTGEFVSAIRHEKMPEFRNKYRTVDVFLVDDIQFIAGKD 214 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N + S + +++I+ DRPP +++ L SR G I +QP E +L Sbjct: 215 STQEEFFHTFNELY-SKQKQIVISSDRPPMEISDITDRLRSRFGMGLIADIQPPEIETRL 273 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L +A + G +LPEDV F+ R+ +R L +L +L + + +++ K +L Sbjct: 274 AILYKKADMEGVKLPEDVAYFIASRVKSNVRELEGSLIKLCAYTSLTKVPISMDVAKYVL 333 Query: 232 K 232 + Sbjct: 334 R 334 >UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOMG Length = 450 Score = 283 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELS 68 L TF +F G ++ A + +G ++++ G G++HLL A ++ Sbjct: 114 NLNAKYTFDTFVCGGSNQFAHAAALSVANNPAGKYNPLFIYGGVGLGKTHLLTAIGNQVL 173 Query: 69 QRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V + +K + + + + L+ ID+I+ IAG E + Sbjct: 174 TKNRKARVCFYTSEKFMNELINCLRYQKMEQFRNKFRKMDLLLIDDIQFIAGKERTQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ES K ++++T D+ P+ + L SR +WG I +QP E K+ L + Sbjct: 234 FHTFNALYESHK-QIVVTSDKFPKDIPGLEERLRSRFEWGLIADIQPPDTETKVAILSKK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G LP+DV FL +R L L +L + + +T+ +E+LK Sbjct: 293 ADSDGIRLPDDVALFLASSASTNVRELEGMLIRLGAVASLTGKNITLDMAREVLK 347 >UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=Q1IVU4_ACIBL Length = 461 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G + A + S ++L+ G G++HL+ A + Sbjct: 125 QLNPKYIFDNFVTGPGNQFAHAASRAVADRPSKTYNPLFLYGGVGMGKTHLMQAIGHTIK 184 Query: 69 QRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + ++ YV +K T + + + ++ ID+I+ IA E + Sbjct: 185 RNNPEHSICYVSSEKFTNDMINSVRYDKMTSFRERYRTVDVLLIDDIQFIARKERTQEEF 244 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E K +L+I DRPP++L L SR +WG I +QP E K+ LQ + Sbjct: 245 FHTFNALHEQQK-QLVIASDRPPKELAEIEDRLRSRFEWGLIADIQPPDLETKVAILQKK 303 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +LP DV F+ + +R L L +L S +L + +++LK Sbjct: 304 AESERTQLPTDVALFIASNIRSNVRELEGALIRLVAYSSLTGGELNLMTAQQVLK 358 >UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n=11 Tax=Epsilonproteobacteria RepID=DNAA_ARCB4 Length = 438 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 108/232 (46%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G ++ + + + ++++ G G++HLL A + Sbjct: 102 LNPSYTFDSFVVGPSNQMAYNASLAVANKPGIQYNPLFIYGGTGLGKTHLLQAVGNHAIE 161 Query: 70 RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 +G+ V YV +++ + + ++ ID+I+ ++G E + F Sbjct: 162 KGNTVIYVTIEQFMNDFTFSIKNKNMEHFRNKYRKCDVLLIDDIQFLSGKEQTQEEFFHT 221 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + + K ++++T DR P Q+ + L SR +WG +Q E K+ ++ ++ L Sbjct: 222 FNELH-NAKKQIVMTSDRLPSQIAGLVDRLKSRFEWGLTADVQIPGLETKIAIIEKKSEL 280 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G L ++ F+ LD +R + L +++ ++ +++T+P V+ +LK Sbjct: 281 NGICLSREIINFIATNLDNSIREIEGVLIRINASASLLNQEITLPMVQGLLK 332 >UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n=203 Tax=Bacteria RepID=DNAA_TERTT Length = 593 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ L LAA V Y ++++ G G++HL+HA L Sbjct: 257 NLNTTFIFDNFVVGKSNQLGLAAASQVAENPGGAYNPLFIYGGVGLGKTHLMHAVGNALV 316 Query: 69 QR--GDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 QR G V Y+ ++ + + + + ID+I+ AG E + Sbjct: 317 QRKPGARVVYLHSERFVADMVKALQLNAISDFKRFYRSVDALLIDDIQFFAGKERSQEEF 376 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +LE G ++++T D+ P+++N L SR WG ++P E ++ L+ + Sbjct: 377 FHTFNALLE-GGQQIILTCDKYPKEINGLEERLKSRFGWGLTVAIEPPELETRVAILKRK 435 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A LP+D F+ +R+ +R L L ++ + QR +++ V+E LK Sbjct: 436 AESSRMPLPDDAAFFIAQRIRSNVRELEGALKRVIANAQFTQRSISVELVREALK 490 >UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MHN4_9BACT Length = 451 Score = 281 bits (719), Expect = 1e-74, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 15/244 (6%) Query: 3 TPAQLSLPLYLP-DDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 P Q + LP TF +F G ++ A + + + +++ G G++H Sbjct: 105 APQQTRVHRQLPNPKYTFENFVVGASNQFAHAASLAVAESPARSYNPFFIYGGVGLGKTH 164 Query: 59 LLHAACAELSQRGD-AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIA 108 LL++ + Q+GD + YV ++ T + E+ ++ ++ ID+I+ +A Sbjct: 165 LLNSIGNFVMQKGDLRIAYVTTEEFTNEVINSIRYDKMSELRRRYRNIDMLLIDDIQFLA 224 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G E + F +N + E+ K +++++ DR P+++ L SR +WG I LQ E Sbjct: 225 GKERTQEEFFHTFNALYEARK-QIVLSSDRFPKEMPSMEERLRSRFEWGLIADLQQPDVE 283 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L+ ++ G + +DV L + L +R L L +L + +T K Sbjct: 284 TRIAILKKKSEEEGIAIGDDVIHLLAEGLKSNIRELEGALIRLGAYCTLTGQAITTDMAK 343 Query: 229 EILK 232 +L+ Sbjct: 344 TVLR 347 >UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n=132 Tax=Proteobacteria RepID=DNAA_SACD2 Length = 524 Score = 280 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSL-LAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAEL- 67 L F +F G ++ L LAA V ++++ G G++HL+HA L Sbjct: 188 NLNPTFIFDNFVVGKSNQLGLAAATQVAENPGGSYNPLFIYGGVGLGKTHLMHAVGNALC 247 Query: 68 -SQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + G V Y+ ++ + + + + ID+I+ AG E + Sbjct: 248 VRKPGAKVVYLHSERFVADMVKALQLNAINDFKRYYRSVDALLIDDIQFFAGKERSQEEF 307 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +LE G ++++T DR P+++N L SR WG ++P E ++ L+ + Sbjct: 308 FHTFNALLE-GGQQIILTCDRYPKEINGLEERLKSRFGWGLTVAIEPPELETRVAILKRK 366 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G LP D F+ +R+ +R L L ++ + R +++ V+E LK Sbjct: 367 AEQVGAPLPNDAAFFIAQRIRSNVRELEGALKRVIANAHFTGRDISVELVREALK 421 >UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D49_SOLUE Length = 437 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G + A + S ++L+ G G++HL+HA +L Sbjct: 103 LNPKFTFNSFVVGACNQFAHAAAKSVATNPSRSYNPLFLYGGVGMGKTHLMHAIGRQLID 162 Query: 70 R--GDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + + Y ++ T + + ++ ID+I+ + E + F Sbjct: 163 QFGSMRIIYTSSERFMNEMISCIRTERMQQFHQRYREADVLLIDDIQLLGNKERTQEEFF 222 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + K +++I+ D PP+ + L L SR +WG + +QP E K+ L +A Sbjct: 223 HTFNELHDHQK-QIVISSDSPPKDIPGLLERLRSRFEWGLMADIQPPDLETKMAILDKKA 281 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + G ELP+DV F+ + +R L L +L S + + +++LK Sbjct: 282 EIEGVELPDDVRTFMASKTKSNVRELEGALVKLIAYSSLTGTPIHLQMAQQVLK 335 >UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n=3 Tax=Gammaproteobacteria RepID=DNAA_PASMU Length = 451 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 16/243 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR----QEHSGYIYLWAREGAGRSHLL 60 Q + YL F +F G ++ L A+ + + S ++L+ G G++HLL Sbjct: 107 PQTVIRSYLNPKHVFENFVEGKSNQLARAVAQKVADNPGEPSSNPLFLYGGTGLGKTHLL 166 Query: 61 HAACAELSQRG--DAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAG 109 HA + R V Y+ + + E L + +D+I+ A Sbjct: 167 HAIGNGILSRNTNARVLYIHANNFMQQMVNAVRDNKMDEFKKFYRSLDALLVDDIQFFAE 226 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F ++N + ++G+ ++++T DR P+++ L SR WG ++P E Sbjct: 227 KEKTQEEFFHIFNNLFDTGR-QIILTSDRYPKEIEKLEERLKSRFGWGLTTAIEPPELET 285 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L +A + LPE+V F+ ++L +R L L+++ + +TI FV+E Sbjct: 286 RVAILLKKAEEKNIYLPEEVAFFIGQKLRTNVRDLEGALNRVSANAEFMGAAITIDFVRE 345 Query: 230 ILK 232 LK Sbjct: 346 TLK 348 >UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=D1ADA0_THECD Length = 721 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G ++ A + ++ + ++++ G G++HLLHA Sbjct: 379 RLNPKYTFETFVIGSSNRFAHAAAVAVAEQPAKAYNPLFIYGDSGLGKTHLLHAIGHYAQ 438 Query: 69 Q--RGDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 G V YV ++ T F+ + DG + ++ +D+I+ + G E + Sbjct: 439 SLFSGVRVRYVSSEEFTNDFINAIRDGKADHFRRRYRDIDILLVDDIQFLEGKEQTQEEF 498 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++I+ DRPP+ L L +R +WG +QP E ++ LQ + Sbjct: 499 FHTFNTLHNASK-QIVISSDRPPKDLVTLEDRLRNRFEWGLTTDVQPPELETRIAILQKK 557 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 AR G +P+DV F+ ++ +R L L ++ + ++ + + + +LK Sbjct: 558 ARQEGLAVPQDVVEFIASQIATNIRELEGALIRVTAYASLNRQSVDMRVAETVLK 612 >UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridia RepID=A4XFI1_CALS8 Length = 454 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 111/239 (46%), Gaps = 19/239 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG-----YIYLWAREGAGRSHLLHAACAE 66 L TF +F G+N+ L A + + G ++++ G G++HL+HA Sbjct: 111 TLNPKYTFETFVVGNNNRLAHAAALAVAETPPGEKTYNPLFIYGGVGLGKTHLMHAIGHH 170 Query: 67 LSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + V YV + T E ++ ++ ID+I+ + G E + Sbjct: 171 VLKLYPDTKVMYVTSEIFTNELIAAIRDEKTDEFRMKYRNVDVLLIDDIQFLGGKERTQE 230 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E+ K ++++ DRPP+++N L SR +WG I +QP E ++ L Sbjct: 231 EFFHTFNTLYEANKK-IILSSDRPPKEINTLEDRLRSRFEWGLITDIQPPDFETRIAILS 289 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA--QRKLTIPFVKEILK 232 + +L G +P+ + F+ +++ +R L L+++ S +++T+ ++ LK Sbjct: 290 KKCQLEGTPVPQHILEFIASKIETNIRELEGALNKILAYSKLMAPDKEITLELAEKALK 348 >UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH23_9GAMM Length = 234 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 143/229 (62%), Gaps = 1/229 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 N P Q+ L + L DD F +F+ N + A L+ + + ++W EG G +HLL Sbjct: 4 NHPFQIPLSVSLRDDARFENFYAQGNELVCATLKAAAQGTGEQFTFIWGNEGVGCTHLLQ 63 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A C E G + Y+PLD+ +L+GME L LVC+D ++ +AGD WE+A+F + Sbjct: 64 AICHEAEPLGRSAAYLPLDELKHMGSGILEGMEFLDLVCLDAVQSVAGDRDWEVALFHFF 123 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NRI E G T L+I PR L + LPDLASRL WG ++++QPLSD+ KL+A+Q+RA R Sbjct: 124 NRIREQGNT-LVIASTSAPRYLGISLPDLASRLSWGMVFQVQPLSDDTKLKAIQMRASAR 182 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 G E ++V RFLL R M L LD LD+AS++A+RK+TIPF+KE+ Sbjct: 183 GLEFSDEVARFLLHHASRNMNDLTSLLDTLDQASLSAKRKVTIPFIKEV 231 >UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n=1 Tax=Magnetococcus sp. MC-1 RepID=DNAA_MAGSM Length = 447 Score = 273 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 15/244 (6%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHL 59 T Q + L TF SF G + + A + + +++ G G++H+ Sbjct: 102 TGDQENFHSGLDPRYTFDSFVVGGCNQFVHAAAARVAEAPAAAYNPLFIHGGVGLGKTHV 161 Query: 60 LHAACAELSQ--RGDAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIA 108 + A + + V Y+ + + + + + ++ +D+I+ IA Sbjct: 162 MQAIGNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVFDFKENFRSVDVLLVDDIQFIA 221 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G + + F +N + E+ K ++++T D P ++ L SR G + +QP E Sbjct: 222 GKKATQEEFFHTFNALYEA-KKQIVMTADSFPHEIEHLEERLRSRFGMGLVADMQPPDLE 280 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ LQ +A G L ++V FL + +R L L ++ + + +T+ VK Sbjct: 281 TRVAILQKKAGSEGLRLADEVAFFLADAVQTNVRELEGALIRVSAYASLTGKPITMALVK 340 Query: 229 EILK 232 E LK Sbjct: 341 ESLK 344 >UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridiales RepID=C0EA18_9CLOT Length = 454 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 109/231 (47%), Gaps = 15/231 (6%) Query: 16 DETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELSQRGD 72 + TF +F G +++ A + Q+ SG ++++ G G++HLL A E+ ++ Sbjct: 120 EYTFDTFIVGSSNTFAYAACKAVAQQQSGAYNPLFIYGPSGLGKTHLLMAISHEIKRQNP 179 Query: 73 --AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + Y+ + E + + ++ +D+I+ +AG + F + Sbjct: 180 DTNILYINGEAFANELITAIGRQATNEFREKYRRVDILLMDDIQFLAGKTQTQEEFFYTF 239 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + + GK ++++T DRPP+ + L +R +WG + + P E ++ ++ +A+L Sbjct: 240 NDLHQVGK-QIVLTSDRPPKDIKTLEERLRTRFEWGLLADISPPDFETRIAIIRRKAQLL 298 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 E+P++V F+ RL +R L + ++ + A +I + +++ Sbjct: 299 DIEMPDEVAEFIANRLKNNIRQLEGAVKKIKAYKLLAGSPPSISMAQTVIR 349 >UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n=1 Tax=bacterium Ellin514 RepID=B9XCQ3_9BACT Length = 462 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAELS- 68 TF +F G N++ A + + ++L+ G G++HLLHA + Sbjct: 126 FNPKNTFETFVVGGNNNFAHAAAQAVAQAPGKSYNPLFLYGGVGLGKTHLLHAIGHHVLS 185 Query: 69 -QRGDAVGYVPLDKRTWFVPEVLDG---------MEHLSLVCIDNIECIAGDELWEMAIF 118 ++G V YV +K T + + ++ ID+I+ +AG E + F Sbjct: 186 HKKGARVAYVSSEKFTNEYIDAIQNNQIAKFRKKYRQTDVLLIDDIQFLAGKERIQEEFF 245 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K ++++T DRP ++ L SR +WG + LQP E ++ L+ +A Sbjct: 246 HTFNALHEAHK-QIVLTCDRPASEIQNLEHRLVSRFEWGLVTDLQPPDIETRMAILRKKA 304 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G ELPED+ FL R+ +R L L ++ + +KLTI V+ +L+ Sbjct: 305 ASMGVELPEDILNFLANRIRANIRRLEGALIRVASYASLTGKKLTIEVVEGLLR 358 >UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVY8_9PROT Length = 469 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 14/239 (5%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAA 63 L + Y+ TF +F G + A + ++ +YL+ G G++HL++A Sbjct: 129 LLVDGYIDPRFTFENFIVGSGNEFCHAAAQAVAEKPGAIYNPLYLYGGVGLGKTHLINAV 188 Query: 64 CAEL-SQRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELW 113 L S+ + Y ++ T + + ++ ID+I+ IAG + Sbjct: 189 ANALISKNNYRIAYRTGERFTNELIQAIRNGSTDNFRNQYRQVDVLIIDDIQFIAGKDRT 248 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F +N + E K ++++T DR PR L + L SR +WG + +QP E +L Sbjct: 249 QEEFFHTFNALYEI-KKQIILTSDRSPRDLTNLMERLRSRFNWGLVADIQPPDLETRLAI 307 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +A L G + DV L R+ +R L L +L + R + + F + +L+ Sbjct: 308 LSSKAELAGVHMDRDVANLLATRITNNVRELEGALTRLTAHATLTGRTIDVTFARHVLR 366 >UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9G6_ACIC5 Length = 478 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 19/248 (7%) Query: 3 TPAQLSLP----LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAG 55 P Q L TF +F G + A + + S ++L+ G G Sbjct: 129 MPQQSRFDWSTAAQLNPRYTFDAFVIGSGNQFARAAAEAVAERPSKAYNPLFLYGGVGMG 188 Query: 56 RSHLLHAACAELSQRGDA--VGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNI 104 ++HL+HA E+ R + + YV ++K T + D + L+ ID+I Sbjct: 189 KTHLMHAIGHEVKLRNPSASICYVSVEKFTNEMISSLRYDKMTTFRDKFRSVDLLLIDDI 248 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + ++ E + F +N + E+ K +++I DRPP++L L SR +WG I +QP Sbjct: 249 QFLSQKERTQEEFFHTFNALHENMK-QIVIASDRPPKELPEIEDRLRSRFEWGLIADIQP 307 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E K+ LQ +A LP DV F+ + +R L L +L S ++++ Sbjct: 308 PDLETKVAILQKKAESEHVLLPTDVALFIASNVRTNVRELEGALTRLFAWSQLNGVEISL 367 Query: 225 PFVKEILK 232 ++ LK Sbjct: 368 ATTQQCLK 375 >UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QB93_9SPHI Length = 469 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 16/241 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 L+L YL TF ++ GD + L + + + + ++ G G++HL+ A Sbjct: 128 LTLDSYLNPSYTFDNYVEGDCNRLARSAGYAVAERPGVTSFNPLMIYGGVGLGKTHLVQA 187 Query: 63 ACAELSQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDE 111 + +G V YV +K T + + + ++ ID+++ + E Sbjct: 188 IGNFIKNNNQGKFVLYVTSEKFTNQFLNAVRSDGIRDFTSFYMQVDVLVIDDVQFLQKKE 247 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F ++N + +SGK ++++T DR PR L+ L SR WG LQ E ++ Sbjct: 248 KTQEIFFHIFNHLHQSGK-QIIMTSDRAPRALDGLEDRLLSRFKWGLSADLQTPDLETRI 306 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +Q + + G + + V +L ++ +R L + L + +R++ + K+ L Sbjct: 307 AIIQKKLQAEGIYIDDTVIEYLAHSVNTNVRELEGVIVSLMAQASLNRREIDLELAKQTL 366 Query: 232 K 232 + Sbjct: 367 R 367 >UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n=38 Tax=Bacteria RepID=DNAA_STRGG Length = 622 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + + ++++ G G++HLLHA Sbjct: 282 RLNPKYLFDTFVIGASNRFAHAAAVAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYAR 341 Query: 69 Q--RGDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 G V YV ++ T F+ + DG + ++ +D+I+ +A E + Sbjct: 342 SLYPGTRVRYVSSEEFTNEFINSIRDGKGDTFRKRYRDVDILLVDDIQFLASKESTQEEF 401 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++++ DRPP+QL L +R +WG +QP E ++ L+ + Sbjct: 402 FHTFNTLHNANK-QIVLSSDRPPKQLVTLEDRLRNRFEWGLTTDVQPPELETRIAILRKK 460 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A P +V F+ R+ R +R L L ++ + ++ + + + +LK Sbjct: 461 AVQEQLNAPPEVLEFIASRISRNIRELEGALIRVTAFASLNRQPVDLGLTEIVLK 515 >UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n=8 Tax=Corynebacterium RepID=DNAA_CORA7 Length = 546 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS- 68 L TF +F G ++ + + + +++W G G++HLLHAA Sbjct: 206 LNPKHTFENFVIGSSNRFANGAAVAVAENPARAYNPLFIWGGSGLGKTHLLHAAGNYAQV 265 Query: 69 -QRGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECIAGDELWEMAIF 118 G V YV ++ T ++ + D +L ++ +D+I+ + G E + F Sbjct: 266 LHPGLRVKYVSSEEFTNDYINSLRDDRQESFKRRYRNLDILMVDDIQFLEGKESTQEEFF 325 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + ++ K +++++ DRPP+QL L +R + G I +QP E ++ L +A Sbjct: 326 HTFNALHQANK-QIILSSDRPPKQLTTLEDRLRTRFEGGLITDIQPPDLETRIAILMKKA 384 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G ++ V + R + +R L L ++ S +++ + L Sbjct: 385 SADGTDVDRSVLELIASRFESSIRELEGALIRVSAYSSLVNEPISLEMAEIAL 437 >UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 Tax=Shewanella RepID=A1S6W5_SHEAM Length = 241 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 115/233 (49%), Positives = 159/233 (68%), Gaps = 1/233 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPG-DNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + P QLSLP++LPDDETF S++P N L+ AL++ + IYLW +GR+HL+ Sbjct: 9 HPPLQLSLPVHLPDDETFTSYYPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLI 68 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACA ++ Y+PL +L+G+E L+CID+++ +AG LWE AIFDL Sbjct: 69 HAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDL 128 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+ E + L+++ P + LPDL SR+ WG Y+LQP+ D++KL ALQ RA + Sbjct: 129 YNRVAEQKRGSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAM 188 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG +LPEDVGRFLL R+ R++RTLF LD+LD+AS+ QRKLTIPFVKE+L+L Sbjct: 189 RGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQRKLTIPFVKEMLRL 241 >UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=A8LVG8_SALAI Length = 591 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + + ++++ G G++HLLHA + Sbjct: 252 RLNPKYMFETFVIGSSNRFAHAASVAVAESPAKAYNPLFIYGSSGLGKTHLLHAIGHYAT 311 Query: 69 QRGD--AVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECIAGDELWEMAI 117 G+ +V YV ++ T F+ + D + ++ ID+I+ + E + Sbjct: 312 TLGNAHSVRYVSTEEFTNDFINSLRDDKTSAFQRRYRDVDILLIDDIQFLENRERTQEEF 371 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++IT DR P+QL L +R +WG + +QP E ++ LQ + Sbjct: 372 FHTFNTLHNANK-QIVITSDRSPKQLATLEDRLRTRFEWGLLADIQPPDLETRIAILQKK 430 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A P DV F+ R+ +R L L ++ + + + + +E+L+ Sbjct: 431 AAQERLFAPPDVLEFIASRVSNSIRELEGALIRVTAFASLTRSSVELSLAEEVLR 485 >UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n=1 Tax=beta proteobacterium KB13 RepID=B6BVS5_9PROT Length = 450 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAELS 68 L + F +F G + L A + E ++++ G G++HLL + ++ Sbjct: 114 GLNKNLNFENFVTGRANQLATAAAKQVSERPGESYNPLFIYGGVGLGKTHLLQSIGNKVK 173 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + Y+ ++ V + L L+ ID+I+ I + Sbjct: 174 EENKDFKIKYLHAERYVTDVVKAYEGKTFDQFKKNYHSLDLLLIDDIQFIGKKNRTQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N ++E+ K +++IT D P+++ L +R WG ++P E ++ L + Sbjct: 234 FYAFNTLIEN-KKQIIITCDSYPKEIQGVDERLRTRFSWGLTVAIEPPELEMRVAILLKK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A + LPEDV F+ K++ +R L L+++ S + + KE LK Sbjct: 293 AEISKITLPEDVAFFIAKQIRSNVRELEGALNRIVALSNFTNLPIDLNLAKEALK 347 >UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5C4_SPHTD Length = 471 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 19/246 (7%) Query: 4 PAQLSLPL----YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGR 56 P QL L L F F G N+ L A + + +Y++ G G+ Sbjct: 119 PQQLELTATPEHGLNPRYVFEKFVVGSNNRLAHAAALAVADRPADKFNPLYIYGGVGLGK 178 Query: 57 SHLLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIE 105 +HLLHA R + YV + T + + + ++ ID+I+ Sbjct: 179 THLLHAIGHRALARSPELRIRYVSSETFTNELINAIRQQRTEDFRNRYRTIDILMIDDIQ 238 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 IAG E + F +N + +SGK +++I+ DRPP+ + L SR + G + +QP Sbjct: 239 FIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPKAIPTLADRLRSRFEGGLLADIQPP 297 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E + L + R G +P+DV ++ ++++ +R L L+++ S R +++ Sbjct: 298 DLETRAAILAEKGRELGVTVPDDVLEYVARKVESNIRELEGALNKIIALSQLYHRPISME 357 Query: 226 FVKEIL 231 E L Sbjct: 358 LAIEAL 363 >UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QRY8_CHLT3 Length = 496 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL 67 YL F +F GD + L A + + + ++ G G++HL+ A Sbjct: 156 YLNPKYRFENFVKGDCNDLAHAAAKSVSETPGKSSFNPLVIYGGVGLGKTHLIQAIGNHA 215 Query: 68 SQRGDA--VGYVPLDKRT-WFVP--------EVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + A V YV +K T FV E ++ L+ ID+I+ E + Sbjct: 216 RENNKAKFVMYVSSEKFTIEFVNAIQNNQAHEFSAFYRNVDLLIIDDIQFFERKEKTQEE 275 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 IF ++N + ++ K +++++ DRP ++L L SR WG LQ E + LQ Sbjct: 276 IFHIFNTLHQANK-QIVLSSDRPIKELKGIEERLLSRFQWGLTADLQLPDYETRRAILQR 334 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L E + F+ + +R L L +L + + + +P K IL+ Sbjct: 335 KLEENSATLDESIIDFIATNMTSNIRELEGCLVKLLATASLNAKSIDLPLAKNILR 390 >UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM39_9BACT Length = 446 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 16/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L D TFA+F G ++ + + + ++++ G G++HL+HA + Sbjct: 107 GLNRDYTFANFVAGGSNEFSFSACEAVSEGQFMQYNPLFIYGGSGLGKTHLMHAVGNRIL 166 Query: 69 QRGDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 ++ V Y+ + T + E + ++ D+++ ++G + Sbjct: 167 EKFPKMKVLYITSETFTNDMINSLRTRKMEEFQARYRTIDVLLFDDVQFLSGKQRSTEEF 226 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F+ +N + ++ K +++IT D+ P ++ L SR WG I +QP S E+K L R Sbjct: 227 FNTFNALYDNQK-QIIITSDKTPAEIPDMEDRLKSRFAWGLIADIQPPSTEEKTAILMKR 285 Query: 178 ARLRGFELPEDVGRFLLKRL-DREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A G +LP +V F+ + + +R L L +L + +R LTI K+ L Sbjct: 286 AEFMGLKLPGEVALFIAENMITENVRELMGALVRLSAFASFHKRGLTIDLAKDAL 340 >UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n=56 Tax=Alphaproteobacteria RepID=DNAA_ANAMM Length = 471 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 17/239 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQ-----EHSGYIYLWAREGAGRSHLLHAA 63 L L TF +F G + L A + + S ++L+ G G++HL+HA Sbjct: 131 LSSPLDPRFTFDNFVVGKPNELAFAAARRVAESSAPIPGSNPLFLYGGVGLGKTHLMHAI 190 Query: 64 CAELSQRG--DAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDEL 112 + + Y+ +K + + + ++ +D+++ I+G + Sbjct: 191 AWYILNSSVKRKIAYLSAEKFMYQYVTALRSKDIMLFKEQFRSVDILMVDDVQFISGKDS 250 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N +++ K +L+I+ DR P L+ + SRL WG + + + E +L Sbjct: 251 TQEEFFHTFNALIDQNK-QLVISADRSPSDLDGVEDRIKSRLGWGLVADINETTFELRLG 309 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQL+ G +P +V FL K + +R L L+++ S R +TI IL Sbjct: 310 ILQLKIEKMGVHVPNEVLEFLAKNIKSNIRELEGALNKVVAHSSLVGRSVTIESASGIL 368 >UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n=4 Tax=candidate division TM7 RepID=A5KS09_9BACT Length = 486 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 16/229 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF ++ G N+ L A + + I+++ G G++HL+ A E++ Sbjct: 152 LNPRYTFETYIVGSNNDLAYAACQAVAKSPGRKYNPIFIYGGVGLGKTHLIQAVGNEIAH 211 Query: 70 RGDAVGYVPLDKRTWFVPEVL-----------DGMEHLSLVCIDNIECIAGDELWEMAIF 118 A + ++ T FV E L D ++ ++ ID+I+ IAG E + F Sbjct: 212 TDRAARILYVNTET-FVNEFLEYIRFKKKGFSDRYRNVDVLIIDDIQFIAGKEKTQEEFF 270 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + ++ K +++I+ D+PPR + L SR +WG +Q E + ++ +A Sbjct: 271 HTFNVLHQANK-QIIISSDKPPRSIPTLTERLRSRFEWGMAIDIQIPDFETRSAIIETKA 329 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 G ELP + ++ + +R L L+QL I Sbjct: 330 SQAGIELPRETVEYMASNIKTNIRELEGALNQLLAFCEMRGVTPDIQTA 378 >UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n=4 Tax=Campylobacter RepID=DNAA_CAMC5 Length = 436 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 100/240 (41%), Gaps = 16/240 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 AQ +L L TF +F G ++ ++ ++++ G G++HLL Sbjct: 96 AQSTL---LNPAYTFENFVVGGSNEYAFLSAKAASEQPGKIYNPLFIYGPTGLGKTHLLQ 152 Query: 62 AACAELSQRGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + +G V V ++ + + + ++ ID+++ + + Sbjct: 153 SVGNFCLNQGKVVICVTSEQFMTDFTYNINNHSMERFREKYRNCDVLLIDDVQFLGKTDK 212 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + S ++++T DR P+ L L +R +WG + + P + K+ Sbjct: 213 IQEEFFHTFNELH-SKNGQIVMTSDRQPKLLKGFEDRLRTRFEWGIMADITPPELDTKIA 271 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +Q + L +DV ++ + +R + + L+ + ++++T+ F K +++ Sbjct: 272 IIQKKCEFDKIYLNKDVINYIATNMGDNIREIESAIINLNAYANLMRQEITLDFAKNVMR 331 >UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n=62 Tax=root RepID=DNAA_RHOSR Length = 528 Score = 266 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G ++ A + + +++W G G++HLLHAA + Sbjct: 189 LNAKYTFDTFVIGSSNRFAHAAAVAIAEAPARAYNPLFVWGASGLGKTHLLHAAGHYAQR 248 Query: 70 --RGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECIAGDELWEMAIF 118 G V YV ++ T F+ + D ++ +D+I+ I G E + F Sbjct: 249 LFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRRYRETDVLLVDDIQFIEGKEGIQEEFF 308 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + K +++++ DRPP+QL L +R +WG I +QP E ++ L +A Sbjct: 309 HTFNTLHNANK-QIVVSSDRPPKQLATLEERLRTRFEWGLITDVQPPELETRIAILSKKA 367 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 R+ E+P+DV + R++R +R L L ++ + ++ L + + +L+ Sbjct: 368 RMDRLEVPDDVLELIASRIERNIRELEGALIRVTAFASLNRQPLDLTLAEVVLR 421 >UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n=60 Tax=Alphaproteobacteria RepID=DNAA_GLUOX Length = 479 Score = 265 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 113/238 (47%), Gaps = 15/238 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 L + L TF +F G + A + ++ S ++L+ G G++HL+HA Sbjct: 140 LAVPLDPRFTFDTFIVGKPNEFAYACARRVAEKPSSPGFNPLFLYGGVGLGKTHLMHAIG 199 Query: 65 AELSQRGD-AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 EL++ G +V Y+ +K E + + + ++ ID+++ + G + + Sbjct: 200 TELTRTGKVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRSVDVLMIDDLQFLIGKDNTQ 259 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N ++++G+ +++++ D+ P L+ L +RL G + + + E ++ L Sbjct: 260 EEFFHTFNALVDAGR-QIIVSADKSPSDLSGLEDRLRTRLGCGMVADIHATTFELRISIL 318 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +A+ G +P V +L ++ +R L L++L + R +T+ +++LK Sbjct: 319 EAKAKASGTHVPSKVLEYLAHKITTNVRELEGALNRLIAHADLVGRPVTLDTTQDVLK 376 >UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A5Z7E4_9FIRM Length = 462 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 103/244 (42%), Gaps = 20/244 (8%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 L L TF SF G N+++ + + ++++ G G++HL+ + Sbjct: 115 ILDANLNKKYTFDSFVVGSNNNIAQVTSLAVAESPGDVYNPLFIYGGVGLGKTHLIQSIG 174 Query: 65 AELSQRGDA--VGYVPLDKRT--------------WFVPEVLDGMEHLSLVCIDNIECIA 108 + + + V Y + T + E + ++ ID+I+ I+ Sbjct: 175 NFVLKNNPSAKVLYTTSESFTNEVIDLLRKKKTNQEEIIEFRKKYRSVDVLLIDDIQFIS 234 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G + + IF+++N + K ++++T D+ P+ + L SR + G +Q E Sbjct: 235 GRDRTQEEIFNIFNDLFMKHK-QIVLTSDKKPKDMEGIAERLISRFEQGLTVDIQNPDYE 293 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L+ +A G+ + E V +++ +R L +L ++ S + +T+ F Sbjct: 294 TRMAILKKKAETSGYNIDEGVLQYIANHFVSNVRELEGSLTRVITFSKISHSPITVDFAS 353 Query: 229 EILK 232 +L+ Sbjct: 354 GVLQ 357 >UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MB19_9PROT Length = 474 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 21/238 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAA-LQNVLRQEH--SGYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G + L A V ++++ G G++HL+ A + Sbjct: 138 GLNPNFTFDNFITGKANQLARAGAIQVAESPGVAYNPLFIYGGVGLGKTHLIQAIGNYVH 197 Query: 69 QRGDA--VGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAGDELWE 114 + + + YV +K +V +V+ +H L L+ +D+++ G + Sbjct: 198 ENNKSAKIRYVHAEK---YVSDVVSAYQHKAFDKFKLYYHSLDLLLVDDVQFFGGKNRTQ 254 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N ++E+ K +++IT D P+++ L SR WG ++P E ++ L Sbjct: 255 EEFFYAFNALIETHK-QVIITCDTYPKEITGLEERLVSRFGWGLTVAVEPPELEMRVAIL 313 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A + L E+V F+ K + +R L L ++ S + +T+ KE LK Sbjct: 314 LKKAEMEKIRLDENVAFFIAKHIRSNVRELEGALKRVLAFSRFVNQDITLDLAKEALK 371 >UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSM0_9CORY Length = 527 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 16/244 (6%) Query: 3 TPAQLSL-PLYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSH 58 P Q L TF SF G ++ A + + E +Y+W G G++H Sbjct: 172 QPKQAPAANSTLNPKHTFESFVIGKSNQFSQAAAFAVAESPAEAYNPLYIWGGSGLGKTH 231 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECI 107 LLHA Q G V YV ++ T ++ V D +L ++ +D+I+ + Sbjct: 232 LLHATGNYALQLHPGIRVMYVSSEEFTNDYINSVRDDKQESFKHRYRNLDILMVDDIQFL 291 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + F +N + ++ K +++++ DRPP+ L L +R G I +QP Sbjct: 292 EGKEGTQEEFFHTFNALHQANK-QIILSSDRPPQNLVTLEDRLRTRFQAGLITDIQPPDL 350 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E ++ L+ +A ++ D + +R+L L ++ + R++T V Sbjct: 351 ETRIAILEKKAIAEHVQVDRDSLTEIATPFPGSIRSLEGALIRVTAFASLTHRQITPDLV 410 Query: 228 KEIL 231 +E L Sbjct: 411 REAL 414 >UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n=7 Tax=Bacteria RepID=DNAA_ROSS1 Length = 481 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 20/247 (8%) Query: 4 PAQLSLP-----LYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAG 55 P QL L L TF F G ++ L A + + + ++L+ G G Sbjct: 128 PQQLELHRAVRSSMLNPRYTFDRFIIGPSNRLANAACMAVAEHPAQAYNPLFLYGGVGLG 187 Query: 56 RSHLLHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNI 104 ++HLLHA + R V YV + T E ++ ++ ID+I Sbjct: 188 KTHLLHAIGNFVLDRDPEVNVLYVSSETFTNDLINSIRRQQTEEFRIRYRNIDILLIDDI 247 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + IAG E + F +N + +GK +++I+ DR P+ + L SR +WG I +Q Sbjct: 248 QFIAGKEQTQEEFFHTFNTLHSAGK-QIVISSDRSPKAILTLEERLRSRFEWGLIVDVQM 306 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E + L+ +A +P+ V FL +R+ +R L L+++ + +TI Sbjct: 307 PDLETRTAILRAKAEQSPVPVPQPVIDFLAQRIQSHIRELEGCLNRVTAFAQMYNVPVTI 366 Query: 225 PFVKEIL 231 L Sbjct: 367 EVATAAL 373 >UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n=6 Tax=Cyanobacteria RepID=DNAA_THEEB Length = 453 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F+ + G N+ + A + + ++L G G++HL+ A Sbjct: 112 ELNPKYVFSRYVVGPNNRMAHAACLAVAESPGREFNPLFLCGGVGLGKTHLMQAIGHYRL 171 Query: 69 Q--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV ++ T + + + ++ +D+I+ I G E + Sbjct: 172 EIDPNAKIFYVSTEQFTNDLIAAIRKDSMQSFREHYRAVDVMLVDDIQFIEGKEYTQEEF 231 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+GK ++++ DRPP Q+ L SR G I +QP E ++ LQ + Sbjct: 232 FHTFNTLHEAGK-QVVLASDRPPSQIPRLQERLCSRFSMGLIADIQPPDLETRMAILQKK 290 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A LP +V ++ +R L L + + +T+ + +L Sbjct: 291 AEYENIRLPREVIEYIAASYTSNIRELEGALIRAVAYISISGLPMTVENIAPVL 344 >UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=DNAA_THERP Length = 465 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 19/249 (7%) Query: 2 NTPAQLSL-PLY---LPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGA 54 + QLSL P L TF F G N+ L A + E ++++ G Sbjct: 104 SASKQLSLTPSPEHGLNPRYTFEKFVVGPNNRLAHAAALAVADRPGEKFNPLFIYGGVGL 163 Query: 55 GRSHLLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDN 103 G++HLLHA V YV + T + + + ++ ID+ Sbjct: 164 GKTHLLHAIGHRALANRPTLKVCYVSSEVFTNELINAIRHQRTDDFRNRYRTIDILMIDD 223 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 I+ IAG E + F +N + +SGK +++I+ DRPPR + L SR + G + +Q Sbjct: 224 IQFIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPRLIPDLADRLRSRFEGGLLADIQ 282 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 P E + L + R G ++P DV F+ +R++ +R L L+++ + + +T Sbjct: 283 PPDLETRQAILIEKGRELGVQMPSDVVEFVARRIESNIRELEGALNRIVALAQLTHQPIT 342 Query: 224 IPFVKEILK 232 + E L+ Sbjct: 343 LALAVEALR 351 >UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID0_9BACT Length = 443 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 101/239 (42%), Gaps = 18/239 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 + L + TF F G N++ + + + ++++ G G++HL+ A Sbjct: 101 NVRLNERYTFDEFVVGKNNNFAYSAAKAVAESPGYTYNPLFIYGESGMGKTHLMQAIGNY 160 Query: 67 LSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + G ++ Y+ + T +PE + L+ +D+I ++ E + Sbjct: 161 ILKEGRNCSIYYITSEAFTNEMIDGIRSNKMPEFRAKFRKVDLLLMDDIHFLSRKEGTQE 220 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E+ K ++++T DRPP+ + L +R + G + L+ E ++ L+ Sbjct: 221 EFFHTFNALFEN-KKQIVLTSDRPPKDIPDLEKRLVTRFESGLLCDLKSPDFETRVAILR 279 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ---RKLTIPFVKEIL 231 +A L + + F+ + +R L +L ++ S + + I EIL Sbjct: 280 KKAEPENVVLSDAIFNFIADNITSSVRALEGSLIRILAFSSYNKLNPEDIDINLAAEIL 338 >UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=2 Tax=Rothia mucilaginosa RepID=D2NQA7_9MICC Length = 564 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 17/237 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE-- 66 L + TF +F G ++ A + ++ ++++ G G++HLLHA Sbjct: 219 RLNPNYTFDTFVIGQSNRFAHASAFAVAEQPGIVYNPLFIYGGSGLGKTHLLHAIGHYTK 278 Query: 67 LSQRGDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T F+ + D ++ ++ ID+I+ +AG E Sbjct: 279 YLYPNLRVRYVNSEEFTNDFINSIRDDEGSSFKQIYRNVDVLLIDDIQFLAGKEATMEEF 338 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K +++IT D PP+QL + SR G +QP E ++ L+ + Sbjct: 339 FHTFNALYNHQK-QIVITSDLPPKQLTGFAERMRSRFGSGLNVDVQPPELETRIAILRKK 397 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ--RKLTIPFVKEILK 232 A+ + +DV ++ + +R L L + A+ + +T+ + LK Sbjct: 398 AQNEILPVRDDVMEYIASHVTANIRELEGALIRASAAASMKKPPEPITLAEAETYLK 454 >UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=C0E1M1_9CORY Length = 594 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 18/245 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 + PAQ L TF ++ D++ L + + ++ + +++W G G++H Sbjct: 247 HNPAQ---DDSLNPRYTFDTYVVSDSNKLPTSAAIAVAEKPARAYNPLFVWGDSGLGKTH 303 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECI 107 L+HA Q + YV ++ T ++ V D +L ++ +D+I+ + Sbjct: 304 LMHAIGNYAQQLDPNLRIKYVSSEQFTNDYINSVRDDRQESFKRRYRNLDILMVDDIQFL 363 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + F +N + + GK +++++ DRPP+QL L +R G I + P Sbjct: 364 QGKEGTQEEFFHTFNALQQGGK-QIVLSSDRPPKQLTTLEDRLRTRFQSGLIADIYPPDL 422 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E ++ L +A DV + + +R L ++ + +++ + Sbjct: 423 ETRIAILMKKAEAEQIVASRDVLELIASQFSSSIRELEGAFIRVSAWASLNNQQINLKTA 482 Query: 228 KEILK 232 ++ L+ Sbjct: 483 EQALE 487 >UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n=1 Tax=Frankia sp. CcI3 RepID=Q2JH46_FRASC Length = 562 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 105/243 (43%), Gaps = 19/243 (7%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLL 60 PAQ L F +F GD++ A + + ++++ G G++HLL Sbjct: 216 PAQ----ARLNPRYIFETFVIGDSNRFPHAAAVAVAEAPAKAYNPLFIYGDSGLGKTHLL 271 Query: 61 HAACAELSQ--RGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECIAG 109 HA + V YV ++ T F+ + D + ++ +D+I+ + Sbjct: 272 HAIGHYALKLYPNMRVKYVSSEEFTNDFINSIRDDRQQAFQRRYRDIDVLLVDDIQFLEN 331 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F +N + + G+ +++I+ DR P+QL+ L SR +WG + + P E Sbjct: 332 KERTQEEFFHTFNVLHD-GEKQIVISSDRSPKQLSALEDRLRSRFEWGLMTDITPPDLET 390 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L +A +P DV ++ ++R +R L L ++ + + + + Sbjct: 391 RIAILSKKAATERLPVPPDVLEYIATHIERNIRELEGALIRVAAFASLNKSHVDRTLAEI 450 Query: 230 ILK 232 +L+ Sbjct: 451 VLR 453 >UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n=28 Tax=cellular organisms RepID=DNAA_NITEC Length = 459 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 21/247 (8%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAA-LQNVLRQEH--SGYIYLWAREGAGRSHL 59 T A+ + P L TF +F G + L A V + ++++ G G++HL Sbjct: 114 TTARKTNPSRLNPAFTFDAFVTGKANQLARAGAIQVAERPGIAYNPLFIYGGVGLGKTHL 173 Query: 60 LHAACAELSQ--RGDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIE 105 +HA + + G + YV +K +V +V+ +H L L+ +D+++ Sbjct: 174 MHAVGNYVMELDAGAKIRYVHAEK---YVSDVVSAYQHKSFDKFKLYYHSLDLLLVDDVQ 230 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 +G + F +N ++E+ K +++IT D P++++ L SR WG ++P Sbjct: 231 FFSGKNRTQEEFFYAFNALIEAHK-QVIITSDCYPKEISGLEERLVSRFGWGLTVAIEPP 289 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L +A + EL E F+ K + +R L L ++ S +++ Sbjct: 290 ELEMRVAILLKKAFIEKIELDESTAFFIAKYIRSNVRELEGALKRVLAYSRFTGHPISLD 349 Query: 226 FVKEILK 232 KE LK Sbjct: 350 LAKEALK 356 >UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_MICLC Length = 515 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELS 68 L D F +F G ++ A N + + + ++++ G G++HLLHA Sbjct: 173 RLNDRYHFETFVIGSSNRFAHAAANAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYAR 232 Query: 69 Q--RGDAVGYVPLDKRT-WFVPE--------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + G V YV ++ T F+ ++ ++ ID+I+ +A E Sbjct: 233 RLYPGLRVRYVNSEEFTNDFINSIRHDEGASFKQVYRNVDILLIDDIQFLADKEATVEEF 292 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++IT D PP+QL+ L SR +WG I +QP E ++ L+ + Sbjct: 293 FHTFNTLYNNNK-QVVITSDLPPKQLSGFEDRLRSRFEWGLITDIQPPDLETRIAILRKK 351 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G P + ++ R+ +R L L ++ + ++ + I + +LK Sbjct: 352 AEAEGLVAPPEALEYIASRISTNIRELEGALIRVTAFASLNRQTVDIELAEHVLK 406 >UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n=9 Tax=Cyanobacteria RepID=DNAA_NOSP7 Length = 459 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F+ F G N+ + A + + ++L G G++HL+ A Sbjct: 118 ELNSKYVFSRFVVGANNRMAHAASLAVAESPGKEFNPLFLCGGVGLGKTHLMQAIGHYRW 177 Query: 69 Q--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV ++ T + + ++ +D+I+ + G E + Sbjct: 178 KICPDCKIFYVSTEQFTNDLITAIRKDSMQSFREHYRAADVLLVDDIQFLEGKEYTQEEF 237 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+GK +++I DRPP Q+ L SR G I +Q E ++ LQ + Sbjct: 238 FYTFNTLHEAGK-QVVIASDRPPNQIPSLQERLCSRFSMGLIADIQKPDLETRMAILQKK 296 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A LP DV ++ +R L L + +T+ + +L+ Sbjct: 297 AEDENIRLPRDVIEYIASNYTSNIRELEGALIRAVAYISIWGLPMTVENITPVLE 351 >UniRef50_UPI000185BFFA chromosomal replication initiator protein DnaA n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BFFA Length = 582 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 18/246 (7%) Query: 3 TPAQLSLPLY---LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGR 56 TP ++S+P L + TF +F G + AA + + +++ G G+ Sbjct: 230 TPTEMSMPFEEPTLNPNYTFETFVIGPQNKFAAAAAVAVAESPGRTYNPLFISGGSGLGK 289 Query: 57 SHLLHAACAELSQ--RGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIE 105 +HLLH V YV ++ T F+ V D L ++ ID+I+ Sbjct: 290 THLLHGIGHYAKHLYPNLRVRYVSSEEFTNDFINSVRDDAQESFKRRYRDLDMLIIDDIQ 349 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + G E + F +N + +S +++++ DRPPR+L L +R WG LQ Sbjct: 350 FLEGKEGTQEEFFHTFNALHQSNH-QIVLSSDRPPRELKTLEDRLRTRFQWGLNPDLQYP 408 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L +A+L +P +V +++ + +R L L Q+ + +T+ Sbjct: 409 DLETRIAILSKKAQLSDLAVPHNVLQYIAENTSSSIRELEGRLLQISAHASMIHEPVTLK 468 Query: 226 FVKEIL 231 F +EIL Sbjct: 469 FAQEIL 474 >UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n=2 Tax=Veillonellaceae RepID=C9KQB2_9FIRM Length = 490 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 104/234 (44%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G ++ A + + +++ G G++HL+HA + Q Sbjct: 153 LNPKYTFETFVTGSSNRFAHAAAMAVAESPGKVYNPFFMYGGVGLGKTHLMHAIGNRVLQ 212 Query: 70 RGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV ++ T + + ++ +D+I+ ++G + + F Sbjct: 213 NHPEMRVLYVSSEQFTNEIIRAIQEGKAELFRQKYRTIDVLMVDDIQFLSGKQSTQEEFF 272 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 + +N + + K +++++ DRPPR++ L SR + G I +Q E ++ L+ +A Sbjct: 273 NTFNALHVADK-QIILSSDRPPREVQKLEDRLRSRFEGGLITDIQAPDLETRIAILKNKA 331 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L ++P DV F+ R+D +R L L ++ + + +T V E LK Sbjct: 332 LLDHVDVPNDVLMFIANRIDSNIRELEGALTRVVAYASLINKPVTTDVVAEALK 385 >UniRef50_C4FYD8 Chromosomal replication initiator protein dnaA n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FYD8_9FIRM Length = 461 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 18/234 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNV---LRQEHSGYIYLWAREGAGRSHLLHAACAELS 68 L + TF++F G+ + + A E ++ G G++HL+ A E+ Sbjct: 125 QLNPNYTFSNFVIGEANKMAHAAALTVCDAPGETYNPYLIYGGVGLGKTHLMQAIGNEIL 184 Query: 69 QRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 R + Y + T + E + ++ ID+I+ ++ Sbjct: 185 SRQPHAKIKYATTESFTNDFITALEKNTIEEFRHMYRKIDVLLIDDIQFLSNKNKTREEF 244 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + GK ++++T DR P L+ L SR WG + P E ++ L+ + Sbjct: 245 FHTFNELYNHGK-QIVMTCDRLPSSLSGLEDRLISRFAWGLQIDITPPDFETRIAILRKK 303 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A E D +++ ++ +R L L ++ + R++T E L Sbjct: 304 ASN---EFSADTLQYIASHVNTNIRELEGALTRVTAYATIHNREITTNLAAEAL 354 >UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n=10 Tax=Bacteroidetes RepID=A4CLW7_9FLAO Length = 474 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 108/236 (45%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHAACAEL 67 L F +F GD++ L + + + G + ++ G G++HL HA E+ Sbjct: 138 QLNPSYNFENFLEGDSNRLARSAGMAVANKPGGTSFNPLLVFGGVGLGKTHLAHAIGVEI 197 Query: 68 SQR--GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + V Y+ +K T + + + + ++ ID+++ ++G + Sbjct: 198 KDKYPERTVLYISAEKFTQQYIESVRKNTRNDFIHFYQLIDVLIIDDVQFLSGKSGTQDV 257 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F ++N + ++GK ++++T D+ P + L SR WG +LQ E ++ L+ Sbjct: 258 FFHIFNHLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAELQSPDYETRVCILKN 316 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + G E+PE++ ++ K + +R L + L S ++++T+ +++++ Sbjct: 317 KLYRDGVEMPEEIIDYVAKHIKSNIRELEGAIISLIAQSSFNKKEVTLDLAQQVVE 372 >UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QR5_CYTH3 Length = 471 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 109/243 (44%), Gaps = 22/243 (9%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAA 63 + L +F +F GD + L + + + + ++ G G++HL+ A Sbjct: 127 PIDSQLNASYSFDTFIEGDCNKLARSAGLAVANKPGVTSFNPLLVYGNVGLGKTHLVQAI 186 Query: 64 CAELSQRG--DAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIECIAG 109 ++ + V Y+P ++ F+ + ++ M++ L ++ +D+++ ++G Sbjct: 187 GNQIKKNHADKKVLYMPSER---FLSQFIEAMKNNQSQEFTNQFLGLDVLILDDVQFLSG 243 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F ++N + +SGK +++IT D P+ + L SR WG LQ E Sbjct: 244 KEKTQEIFFHIFNHLHQSGK-QIIITSDCAPKDIKGLQERLLSRFKWGLSADLQVPDYET 302 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 + + + + G E+ DV +L +D MR L ++ L + R++ + K+ Sbjct: 303 RNAIICKKMQFEGIEIAADVIDYLAYSVDTNMRDLEGVVNSLIAQHTLSGRQIDLELAKQ 362 Query: 230 ILK 232 I++ Sbjct: 363 IIQ 365 >UniRef50_UPI0001BCD63C chromosomal replication initiation protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD63C Length = 478 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 38/256 (14%) Query: 2 NTPAQLSLPLY----------------LPDDETFASFWPGDNSSLLAALQNVLRQ----E 41 +TPAQ SLPL L TF +F G ++ A+ + Sbjct: 114 DTPAQGSLPLTPTPSDTHAAAPDDATTLNPKYTFDAFVTGRSNQFPYAMAKAVADAPGLP 173 Query: 42 HSGYIYLWAREGAGRSHLLHAACAELSQ--RGDAVGYVPLDKRTWFVPEVLDGME----- 94 ++++ G G++HL+HA ++ V Y+ T F E + + Sbjct: 174 SHNPLFIYGGVGLGKTHLMHAVGHKILADHPDRRVLYIAS---TDFTNEFIRSIREKNMD 230 Query: 95 -------HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGL 147 + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + Sbjct: 231 AFREKYYSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVKGLE 289 Query: 148 PDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMT 207 L SR G +QP E ++ LQ +A+ ++PEDV ++ R+D +R L Sbjct: 290 DRLISRFAGGAPVDIQPPEFETRVAILQKKAQSEEVDIPEDVVTYIASRVDSNIRELEGA 349 Query: 208 LDQLDRASITAQRKLT 223 L +L + + T + + Sbjct: 350 LTRLIKYASTMRMPID 365 >UniRef50_C7M114 Chromosomal replication initiator protein dnaA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M114_ACIFD Length = 458 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 TF +F G ++ A + + + +++ G G++HLLHA Sbjct: 117 TFDPRYTFEAFVIGSSNRFAHAAALSVAETPARSYNPLFIHGDAGLGKTHLLHAIGNYAR 176 Query: 69 QRGDAVG--YVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV + E ++ +D+I+ + G E + Sbjct: 177 ENYPNLLTTYVSTETFLNEFVDAIKRNQTSEFKARYRACDILLVDDIQFLEGKEAIQEEF 236 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K ++++T DRPPR L L SR G I +QP E + L+ + Sbjct: 237 FHTFNTLYGAQK-QIVLTSDRPPRALATLEDRLRSRFAMGLITDVQPPDLETRAAILRRK 295 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A G +P V F+ + +R L L +L S +Q +T+ +++L Sbjct: 296 AEDAGVTVPATVIEFIAASITDNIRELEGALTRLAAFSTLSQTGITLTMAEQVL 349 >UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=DNAA_CORJK Length = 583 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS- 68 L + TF +F G +++ AA + + + +++W G G++HLLHA Sbjct: 243 LNKNYTFENFVVGSSNNFAAAACRAVAEAPAKAYNPLFIWGESGLGKTHLLHAIGHYAKE 302 Query: 69 -QRGDAVGYVPLDKRT-WFVPEVLD--------GMEHLSLVCIDNIECIAGDELWEMAIF 118 Q V YV ++ T F+ + + +L ++ +D+I+ + E + F Sbjct: 303 LQPNMRVKYVSSEELTNDFINSIANDTRESFKRRYRNLDMLIVDDIQFLQNKESTQEEFF 362 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + ++ K +++++ DRPPRQL L +R + G I +Q E ++ L +A Sbjct: 363 HTFNALHQANK-QIVLSSDRPPRQLTTLEDRLRTRFEGGLITDVQTPDLETRIAILTKKA 421 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +LPEDV + R ++ +R L L ++ + LT+ + L+ Sbjct: 422 ESDNVQLPEDVKVLIASRYEKSIRELDGALIRVTAYCALSHEPLTVETAEIALR 475 >UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n=21 Tax=Bacteroidetes RepID=DNAA_FLAPJ Length = 478 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 110/241 (45%), Gaps = 16/241 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHA 62 L + L + +F +F GD++ L + + + G + ++ G G++HL HA Sbjct: 136 LKIESQLNANYSFDNFLEGDSNRLARSAGMAVANKPGGTSFNPLLIFGGVGLGKTHLAHA 195 Query: 63 ACAELSQR--GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDE 111 E+ ++ V Y+ + T + + + + ++ ID+++ ++G Sbjct: 196 IGVEVKEKYPEKTVLYISAEIFTQQYIESVKKNNRNDFIHFYQLIDVLIIDDVQFLSGKT 255 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F ++N + ++GK ++++T D+ P + L SR WG ++ E ++ Sbjct: 256 GTQDVFFHIFNYLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAEIHQPDYETRI 314 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ G E+PE++ ++ + + +R L + L S ++++T+ K+++ Sbjct: 315 SILKNILYRDGVEMPEEIIEYVARNIKSNVRELEGAIISLIAQSSFNKKEVTLELAKQVV 374 Query: 232 K 232 + Sbjct: 375 E 375 >UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria RepID=Q4ZQ54_PSEU2 Length = 261 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 104/231 (45%), Positives = 147/231 (63%), Gaps = 4/231 (1%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSHLL 60 P QL L + L DD TF +++PG N++ L ++ + IYLW ++G GR+HLL Sbjct: 30 PIQLPLSVRLRDDATFVNYYPGANAAALGYVERLCEADAGWTESLIYLWGKDGVGRTHLL 89 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC Q G+ Y+PL + E+ D +E LVC+D+++ I G WE A+F L Sbjct: 90 QAACLRFEQLGEPAVYLPLAEVIDEGIELFDHLEQYELVCLDDLQAIVGKPDWEEALFHL 149 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR+ +SG+ RLLI + PR+L + LPDL SRL +++++ LSDEDKL+ALQLRA Sbjct: 150 FNRLRDSGR-RLLIAASKSPRELPVKLPDLKSRLTMALVFQMRGLSDEDKLRALQLRASR 208 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L +DVG F+L R R M LF L++LD+AS+ +RKLTIPF+KE L Sbjct: 209 RGLHLTDDVGHFILTRGTRSMSALFELLERLDQASLQEKRKLTIPFLKETL 259 >UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SK31_9FIRM Length = 471 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 18/238 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAEL 67 L D TF +F G N+ A + + +G ++++ G G++HL+ A E+ Sbjct: 131 LTFSDRFTFNNFVKGKNNEFAMAAAEAVAKNPAGTYNPLFIYGNSGLGKTHLMKAIGHEI 190 Query: 68 SQRGD-AVGYVPLDKRTWFV------------PEVLDGMEHLSLVCIDNIECIAGDELWE 114 + D V Y+ +K T + E ++ ++ ID+I+ IAG + Sbjct: 191 HKNFDCKVLYLSSEKFTIDLIDSIRDKNQNSESEFRKKYRNVDVLLIDDIQFIAGKTATQ 250 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + K +++I+ DRPP+++ L SR + G +QP E ++ L Sbjct: 251 EEFFHTFNELYSRNK-QIIISSDRPPKEIKNLEDRLKSRFNMGLTVDIQPPDFETRMAIL 309 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTL-DQLDRASITAQRKLTIPFVKEIL 231 Q + + L +V F+ + +R L L + L + +T+ +VK IL Sbjct: 310 QDKVKYEPIALSNEVLEFIAMNIKTNIRELEGALINVLAHYKLKQDAPMTVDYVKRIL 367 >UniRef50_A7BAR9 Chromosomal replication initiator protein dnaA n=2 Tax=Actinomyces RepID=A7BAR9_9ACTO Length = 476 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 20/242 (8%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P +L TF +F G ++ A + ++++ G G++HLL A Sbjct: 128 PTHLNPKFTFDTFVIGPSNRFAHAAALAASETPGTAFNPLFIYGDSGLGKTHLLQAIGHN 187 Query: 67 LSQ--RGDAVGYVPLDKRT-WFVPEVL-------------DGMEHLSLVCIDNIECIAGD 110 V YV ++ T F+ + L ++ ID+I+ I Sbjct: 188 ALSMMPHLKVRYVNSEEFTNEFINAIRLNKTDNSQVEAFHRRYRELDILLIDDIQFIGDK 247 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E F +N + + K ++++T D PP QL + SR G + +QP E + Sbjct: 248 EQTVEGFFHTFNALHSANK-QIVLTSDLPPAQLKGFEDRMRSRFSSGLLVDVQPPDLETR 306 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + L +A G E+ +V ++ R+ +R L L ++ + Q ++ + + + Sbjct: 307 IAILHKKADAEGLEVTPEVFEYVASRISSNIRELEGALVRIGAWASLYQERIDLNLAQMM 366 Query: 231 LK 232 LK Sbjct: 367 LK 368 >UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1P4_9FIRM Length = 473 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 36/253 (14%) Query: 3 TPAQLSLPLY--------------LPDDETFASFWPGDNSSLLAALQNVLRQ----EHSG 44 PAQ SLPL L TF +F G ++ A+ + Sbjct: 112 APAQGSLPLTPPETHAAAPDDTTTLNPKYTFEAFVTGRSNQFPYAMAKAVADAPGLPSHN 171 Query: 45 YIYLWAREGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWFVPEVLDGME-------- 94 ++++ G G++HL+HA ++ V Y+ T F E + + Sbjct: 172 PLFIYGGVGLGKTHLMHAVGHKILADDPKKRVLYIAS---TDFTNEFIRSIREKNMDAFR 228 Query: 95 ----HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + L Sbjct: 229 EKYYSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVKGLEDRL 287 Query: 151 ASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ 210 SR G +QP E ++ LQ +A+ ++P DV ++ R+D +R L L + Sbjct: 288 ISRFAGGAPVDIQPPEFETRVAILQKKAQSEDVDIPADVVTYIASRVDSNIRELEGALTR 347 Query: 211 LDRASITAQRKLT 223 L + + T + + Sbjct: 348 LIKYASTMRMPID 360 >UniRef50_C7H083 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H083_9FIRM Length = 455 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 18/236 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F GDN+ A+ + +L+ G G++HL+HA + + Sbjct: 118 LNPKYTFDNFVVGDNNRHAHAVALSIANSEISEYNPFFLYGGPGLGKTHLMHAIGMTIMK 177 Query: 70 R--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YVP + T + E + + ++ ID+I+ + G E + F Sbjct: 178 NFPYKKVLYVPAETFTTDLINSIRKSSQEEFKNKYRMVDVLLIDDIQFMQGKESTQEEFF 237 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + GK +++I+ DR P LN L SR ++P + E ++ LQ + Sbjct: 238 HTFNSLTRLGK-QIVISSDRSPNHLNKLDERLRSRFMQNVTTDIKPANFETRVAILQKKC 296 Query: 179 RLRGFELP---EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + FE+ +V + +D +R L L +L S K+TI + K+ L Sbjct: 297 EIENFEVDANLNEVINLIAHNIDNNIRALEGALTKLISFSRLLNEKITIDYAKKNL 352 >UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n=9 Tax=Alphaproteobacteria RepID=C7JHC5_ACEP3 Length = 477 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 15/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G + A + ++ S ++L+ G G++HL+HA AEL Sbjct: 142 LDSRFTFDTFVVGKPNEFAYACARRVAEKPSSVGFNPLFLYGGVGLGKTHLMHAIGAELI 201 Query: 69 QRGD-AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 Q G+ +V Y+ +K E + + + ++ ID+++ + G + + F Sbjct: 202 QSGNVSVAYMSAEKFMYRFIAAIRSQSTIEFKEQLRSVDVLMIDDLQFLIGKDNTQEEFF 261 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N ++++G+ +++++ D+ P L+ L +RL G + + + E ++ L+ +A Sbjct: 262 HTFNALVDAGR-QIVVSADKSPSDLSGLEDRLRTRLGCGMVADIHATTFELRISILESKA 320 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G +P V FL ++ +R L L++L + R +T+ +E+L Sbjct: 321 AASGVVVPGKVLEFLAHKITSNVRELEGALNRLIAHANLFGRPVTLEATQEVL 373 >UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKQ3_9PROT Length = 442 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 102/232 (43%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ F +F GD++ + +E ++++ G G++HLL + + Sbjct: 103 LSENYNFENFIIGDSNKFAFECSVSVAKEPGIRFNPLFIYGPSGLGKTHLLQSIGNYCIK 162 Query: 70 RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 +G V V ++ + + + ++ ID+I+ + G + + +F Sbjct: 163 KGKTVICVTSEQFANDFVFNLKNNSIDKFKQKYRNCDVLLIDDIQFLIGRDKAQEELFYT 222 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + + ++++T D PP+ L L +R + G I + P + E K+ + ++ Sbjct: 223 FNELKDKN-CQIVLTNDLPPKFLKGFENRLTTRFESGIIANITPPNLETKIAIINKKSEE 281 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P DV ++ + +R + +++L+ S + K+T+ F K L+ Sbjct: 282 NRVRIPHDVVEYIAANMGDNIREIEGAINKLNAYSSILRTKITLEFTKSTLQ 333 >UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n=10 Tax=Chlorobiaceae RepID=DNAA_CHLTE Length = 493 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL 67 L TF++ GD +SL A + Q + ++ G G++H++ A + Sbjct: 153 NLNPKYTFSTLVRGDCNSLAFAASKSIAQNPGQNAFNPLVIYGGVGLGKTHMMQAIGNSV 212 Query: 68 SQR--GDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMA 116 + DAV YV +K FV + +G ++ ++ ID+I+ AG E + Sbjct: 213 LENRITDAVLYVSSEKFAIDFVNAIQNGNIQEFSAFYRNIDVLIIDDIQFFAGKEKTQEE 272 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 IF ++N + +S K +++++ DRP +++ L SR +WG +Q E + +Q Sbjct: 273 IFHIFNTLHQSNK-QIILSADRPIKEIKGIEDRLISRFNWGLSTDIQAPDYETRKAIIQS 331 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + G L V F+ + +R L + +L A +++ + F K LK Sbjct: 332 KLKQSGVSLDPVVIEFIATNVTSNVRELEGCIVKLLAAHSLDNQEIDLQFAKSTLK 387 >UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3G6_GEMAT Length = 472 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 110/245 (44%), Gaps = 17/245 (6%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLL 60 Q + L TF F G ++ + AA Q ++++ G G++HL+ Sbjct: 108 VQQPRISTPLNPRYTFDQFVIGKSNDVAAAAAQAAAQAPGKVYNPLFIYGETGLGKTHLM 167 Query: 61 HAACAELSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAG 109 EL +R + YV ++ T + + + L+ +D+++ + G Sbjct: 168 QGIAHELLRRTPTLRLAYVGTEQFTNEFIGAIQAGAMGDFRRRFREIDLLLVDDVQFLKG 227 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F +N I E+G+ ++++T DRPP+++ L SR +WG + + E Sbjct: 228 KESTQEEFFHTFNAIYEAGR-QIVLTSDRPPKEIPGLESRLVSRFEWGMVANIDSPDLEH 286 Query: 170 KLQALQLRARLRGFEL--PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 ++ L+ +A L EL P++V F+ + + +R L ++ +L + R +++ Sbjct: 287 RIAILKKKASLDHLELTIPDEVIEFIAQHVKSSVRELEGSIIKLLAYASLKHRDISVDLA 346 Query: 228 KEILK 232 +E L+ Sbjct: 347 REALR 351 >UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n=3 Tax=Mobiluncus RepID=C2KT33_9ACTO Length = 533 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 17/246 (6%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHL 59 Q+ L TF SF G ++S AA + + ++++ G G++HL Sbjct: 180 ASMQIDRNTGLNPMYTFESFVIGSSNSFTAAAAESVVVSPAQAYNPLFIYGGSGLGKTHL 239 Query: 60 LHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIA 108 LHA + V YV ++ T PE+ + + ID+I+ + Sbjct: 240 LHAIGNYALELYPQAKVRYVSSEEFTNDFINAIATQTFPELQAKYREVDFLLIDDIQFLQ 299 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G E F +N + + + +++IT D PP++L + SRL+WG + +QP + E Sbjct: 300 GKEQTLEEFFHTFNTLH-TARKQVVITSDVPPKELKSFEERIKSRLEWGLLTDIQPPNLE 358 Query: 169 DKLQALQLRARLRGFE-LPEDVGRFLLKRLDREMRTLFMTLDQLDRA-SITAQRKLTIPF 226 ++ L+ ++ + + V ++ + +R L L ++ +++ +++ Sbjct: 359 TRIAILRRKSAQENLQGYDDAVLEYIASNISSNIRELEGALLRVTAYAALSGGGSVSLDT 418 Query: 227 VKEILK 232 KEIL+ Sbjct: 419 AKEILR 424 >UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=A9KBZ5_COXBN Length = 260 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 103/228 (45%), Positives = 149/228 (65%), Gaps = 2/228 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L ++ TFA+F+ G+N +LL AL +L + +IYLW GR+HLL A C Sbjct: 27 QLPLRVQLREETTFANFYGGNNITLLKALNELLEGKGESFIYLWGEPSVGRTHLLQACCH 86 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 ++ R Y+PL K P +L G+E L+CID+I+ + WE A+ YNR+ Sbjct: 87 TMNNRSLEAMYLPL-KTPQLAPSILQGLESKPLICIDDIDAVLSQPDWEEALLHFYNRVR 145 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 ES + +L+I G+ P QLN L DL SRL WG ++++ L+D +K++ALQ+RA RGFEL Sbjct: 146 ES-QVKLVIAGNYVPPQLNCQLADLRSRLSWGLVFQVIGLTDAEKIKALQMRAHDRGFEL 204 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++VG+FLL+ R+M LF LD+LD+AS+ AQRKLT+PFVKE+L + Sbjct: 205 SDEVGQFLLRHYPRDMSALFNLLDKLDQASLIAQRKLTVPFVKEVLNI 252 >UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n=13 Tax=Rickettsiaceae RepID=DNAA_WOLPM Length = 460 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 19/240 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQE-----HSGYIYLWAREGAGRSHLLHAA 63 L L TF +F G + L + + S ++L+ G G++HL+HA Sbjct: 120 LGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPILGSNPLFLYGGVGLGKTHLMHAI 179 Query: 64 CAELSQRG---DAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDE 111 + V Y+ +K + + + + ++ +D+++ I+G + Sbjct: 180 AWHIVNSPSAKRKVVYLSAEKFMYQYITALRSKDIMLFKEQFRSVDVLMVDDVQFISGKD 239 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N +++ K +L+I+ DR P L+ + SRL WG + + + E +L Sbjct: 240 STQEEFFHTFNALIDQNK-QLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRL 298 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ + +P+DV FL + + +R L L+++ S+ R +T+ E L Sbjct: 299 GILQAKVEQMNMYVPKDVLEFLARNIKSNIRELEGALNKVTHTSLI-GRSMTVESASETL 357 >UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n=35 Tax=Francisella RepID=DNAA_FRAP2 Length = 491 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 17/243 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLH 61 + S L L + F SF GD + + A + + ++++ G G++HL+ Sbjct: 148 QEYSFGLPLKEKYVFDSFVVGDANKIARAAAMQVSINPGKLHNPLFIYGGSGLGKTHLMQ 207 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDG------------MEHLSLVCIDNIECIAG 109 A + + + F+ + ++ ++ ID+I+ IAG Sbjct: 208 AIGNHAREVNPNARIIYTNSE-QFIKDYVNSIRLQDQDEFQRVYRSADILLIDDIQFIAG 266 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E F +N + E+GK ++++T D+ P ++ L SR +G + E Sbjct: 267 KEGTAQEFFHTFNALYENGK-QIILTSDKYPNEIEGLEERLVSRFGYGLTVSVDMPDLET 325 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L +A G +LP + F+ + + +R L L+++ S + TI + Sbjct: 326 RIAILLKKAHDLGQKLPNETAAFIAENVRTNVRELEGALNRVLTTSKFNHKDPTIEVAQA 385 Query: 230 ILK 232 L+ Sbjct: 386 CLR 388 >UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFK9_HALO1 Length = 498 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 22/238 (9%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL-- 67 L TF SF G ++ L A H +++ G G++HLLH+ L Sbjct: 161 LNPRYTFDSFVAGPSNQLALAASQAAASSHPPKYNPVFICGGVGLGKTHLLHSIGHSLHG 220 Query: 68 SQRGDAVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELWE 114 + + Y+ ++ F+ E + + L+ ID+++ +AG + + Sbjct: 221 LRPDARILYLSGER---FMNEYILAIRSNRMHEFRRRYREGCDLLLIDDVQFLAGKDGTQ 277 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + +S + ++++T DR P +++ L SR WG + ++P E ++ L Sbjct: 278 DEFFHTFNALHDSQR-QIVLTADRKPHEISDIADRLRSRFQWGLLADIEPPELEMRMAIL 336 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +A ELP+DV ++ + +R L L +L + +++ +T+ F +E L+ Sbjct: 337 RQKAEAEHIELPDDVVLYIATAIRANVRELEGALIRLSAYASLSRKPITLAFARETLE 394 >UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2T8_SALRD Length = 564 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL 67 +L + TF F GD + L + + QE + ++ G G++HL A Sbjct: 220 HLRPEYTFDEFVEGDGNRLARSAAFAVAQEPGSTNYNPLLVYGGVGLGKTHLAQAVANYA 279 Query: 68 SQRG--DAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMA 116 + + V YV D+ T FV V + L+ +D+++ E + Sbjct: 280 LEHNTAERVLYVSSDRFTSQFVQSVRENRIAAFSSYYRQADLLIVDDVQFFGEKEKTQEE 339 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F ++N + ++GK ++ + DRPP ++ L SR WG +Q E ++ LQ Sbjct: 340 FFHIFNDLHQNGK-QIFLCADRPPAEIPGIEERLLSRFQWGLSADIQRPDLETRIAILQR 398 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A + + DV + +R+D +R L L +L R L + + L+ Sbjct: 399 KAARQDIAVSPDVLELIAQRIDSNVRQLEGALTRLTALVQLDDRTLDLDTARRFLR 454 >UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein DnaA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD9C2 Length = 491 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + + G G++HLLHA + Sbjct: 149 RLNPRYLFENFVIGSSNRFAHAAAVAAAEAPGKAYNPLVIHGESGLGKTHLLHAIGHYVL 208 Query: 69 --QRGDAVGYVPLDKRTWFVPEVL---------DGMEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T V + + ++ +D+I+ I G E + Sbjct: 209 GLYPSSRVRYVNTEEFTNDVINAIGERRTGALKRKYREIDVLLVDDIQFIEGKEATQEEF 268 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K ++++T DRPP+ L L +R +WG + P E ++ L+ + Sbjct: 269 FHTFNALHNENK-QIVMTSDRPPKNLKTLEERLRNRFEWGLTTDVTPPELETRIAILRKK 327 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G +P DV F+ ++ +R L L + + + + + +LK Sbjct: 328 ASSDGLTVPADVLEFIASKVQSNIRELEGALIRATAFANLQGTTVDLNLAQIVLK 382 >UniRef50_UPI0001C36FC2 chromosomal replication initiation protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FC2 Length = 457 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 102/240 (42%), Gaps = 20/240 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ-------EHSGYIYLWAREGAGRSHLLHAAC 64 + D TF +F G ++ A + + ++++ G G++HL+ A Sbjct: 111 FANYDYTFDTFIEGRSNEFALACSKSVAKNCGEKAVPDYNPLFIYGPSGMGKTHLITAIA 170 Query: 65 AELSQRGD--AVGYVPLDKR----------TWFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 E+ + + YV + T + + + ++ ID+I+ +G E Sbjct: 171 NEVRKNHPDFNIVYVTSEAFGGELINALNNTGNIDDFHAKYRNADILLIDDIQFFSGKER 230 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F + + + G+ +++IT D+PP++L L +R + G I + E +L Sbjct: 231 MQEEFFHTFYTLHQEGR-QIVITSDKPPKELLTLEERLRTRFEGGLIADISAPDYETRLA 289 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++ L ++P +V F+ RL +R L + +L + A +TI + +++ Sbjct: 290 IINRKSELLELKMPSEVAEFMANRLKSNIRQLEGAVVRLKALNHFAGSPITISMAQSVIR 349 >UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EX07_DICNV Length = 442 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 100/241 (41%), Gaps = 17/241 (7%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAAL----QNVLRQEHSGYIYLWAREGAGRSHLLHAA 63 + L F +F G ++ A L E + ++ G G+SHL+HAA Sbjct: 99 TFNSRLNPHYQFENFIVGKSNDNAYAAVHRVSKGLLSEDFNPLLIYGGTGLGKSHLMHAA 158 Query: 64 CAELSQRGD-AVGYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDE 111 L Q G V Y+ ++ T + + ++ + + ID+++ ++G Sbjct: 159 GNALCQNGKKRVMYLTAEEFTNDYINAIKNPKREMSDFINFYRNADALLIDDVQFLSGKN 218 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N + + K ++++T DR P+++ L SR G + P E ++ Sbjct: 219 RSQEEFFHTFNSLFD-KKRQIILTCDRFPKEIEGLADRLKSRFGSGLTVSVAPPDYETRI 277 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ +A F LP++V ++ +++ +R L L ++ +T+ + L Sbjct: 278 AILQSKAERLHFSLPKEVEEYIAEKVTSNIRDLEGALRKVYAYCEFNHEIITLDIARNAL 337 Query: 232 K 232 Sbjct: 338 N 338 >UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NID0_KYTSD Length = 506 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELS- 68 L TF +F G ++ A + + ++++ G G++HLLHA Sbjct: 164 LNHKYTFDTFVLGSSNRFAHAAATAVAEAPARAYNPLFIYGGSGLGKTHLLHAIGHYART 223 Query: 69 -QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV ++ T + ++ ID+I+ + G E F Sbjct: 224 LDSSVRVKYVNSEEFTNQFINAVSAGQANAFQRQYRDVDVLLIDDIQFLQGKEQTMEEFF 283 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + S K +++IT D+PP++L+ + SR +WG + +QP E ++ L+ +A Sbjct: 284 HTFNTLHNSEK-QIVITSDQPPKKLSGFAERMRSRFEWGLLTDVQPPDLETRIAILRRKA 342 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P+DV + ++ +R L L ++ + + L + +LK Sbjct: 343 AADKLDIPDDVLHLIASKISSNIRELEGALTRVTAFASLSGSPLDEYLARTVLK 396 >UniRef50_A8YW41 Chromosomal replication initiator protein dnaA n=10 Tax=Lactobacillus RepID=DNAA_LACH4 Length = 455 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 98/240 (40%), Gaps = 15/240 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHA 62 Q + L L + TF +F G+ + L A + ++++ G G++HL+ A Sbjct: 112 QFTKNLKLNEKYTFDNFVQGEGNKLAAGAALAVADSPGSFYNPLFIFGGVGLGKTHLMQA 171 Query: 63 ACAE--LSQRGDAVGYVPLDKR-TWFVP--------EVLDGMEHLSLVCIDNIECIAGDE 111 + + V Y+ + F+ + + L+ +D+I+ A E Sbjct: 172 IGHQMLAERPNAKVVYIQSETFVNDFINSIKNKTQDQFREKYRTCDLLLVDDIQFFAKKE 231 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F + + K ++++T DR P ++ L SR WG ++ P E ++ Sbjct: 232 GIQEEFFHTFETLYNDQK-QIVMTSDRLPTEIPDLSERLVSRFTWGLQVEITPPDLETRI 290 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ +A G + ++ ++ ++D +R L L ++ + + + + +E L Sbjct: 291 AILRRKAEAEGLVIDDNTLDYIASQVDTNIRELEGALVKVQAYATIERADINVNLAREAL 350 >UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n=94 Tax=Proteobacteria RepID=DNAA_CUPTR Length = 589 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLL-AALQNVLRQEH--SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G + L AA V +YL+ G G++HL+H+ + Sbjct: 253 RLNPILTFDNFVTGKANQLARAAAIQVANNPGKSYNPLYLYGGVGLGKTHLIHSIGNHML 312 Query: 69 QRGDA--VGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + Y+ ++ V E L L+ ID+I+ +G + Sbjct: 313 MENPRARIRYIHAEQYVSDVVKAYQRKAFDEFKRYYHSLDLLLIDDIQFFSGKNRTQEEF 372 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F + ++ + + +++IT D P+++ L SR D G ++P E ++ L + Sbjct: 373 FYAFEALI-ANRAQVIITSDTYPKEITGIDDRLISRFDSGLTVAIEPPELEMRVAILMKK 431 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +PE+V F+ K L +R L L ++ S + +TI +E LK Sbjct: 432 AAAENVNVPEEVAFFVAKHLRSNVRELEGALRKILAFSNFHGKDITIEVTREALK 486 >UniRef50_B0S416 Chromosomal replication initiator protein dnaA n=2 Tax=Finegoldia magna RepID=B0S416_FINM2 Length = 485 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 102/239 (42%), Gaps = 19/239 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G N+ L A + Q + +++ + G G++HL+HA E+ Sbjct: 144 NLIAKYKFDTFVKGKNNELALAAALAVAQNPATAYNPLFIHGKAGLGKTHLMHAIAHEIL 203 Query: 69 QRGD--AVGYVPLDKRTWFV------------PEVLDGMEHLSLVCIDNIECIAGDELWE 114 + V Y + T + + ++ ++ ID+I+ IAG + + Sbjct: 204 KNNPKARVIYTTSESFTNELISSIGDKSTKKNSQFRQKYRNIDVLLIDDIQFIAGKQGTQ 263 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + K +++++ DRPP+++ L SR +WG + +QP E ++ + Sbjct: 264 EEFFHTFNELYNHNK-QIILSSDRPPKEIKTLEERLVSRFEWGLMADIQPPDYETRVAIV 322 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTL-DQLDRASITAQRKLTIPFVKEILK 232 LP ++ ++ + +R L + + + + ++ +T+ K +LK Sbjct: 323 NEYLDRNNTSLPPEIIDYIAMNVKSNIRELEGAVMNVVGQKTLIGDGNITLDLAKNVLK 381 >UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S6M2_SALRD Length = 524 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACA 65 L D TF F G + L + + + + ++ G G++HL+ A Sbjct: 182 DNQLNDSYTFDRFIEGACNRLARSAAHSIATDPGETSFNPFLVYGGVGLGKTHLIQAIGN 241 Query: 66 ELSQR--GDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 ++ R V YV ++ T + E + ++ +D+++ G E + Sbjct: 242 HVAARDASKTVFYVSSERFTTEFVQSIQENQIGEFSTFYRQVDVLIVDDVQFFGGKEKTQ 301 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++G +++++ DRPPR+++ L SR WG L+P + ++ L Sbjct: 302 EEFFHIFNALRQAGN-QIVLSADRPPREIDGLEERLLSRFQWGLSADLKPPGLDTRISIL 360 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +A G +L +DV F+ + ++ +R L L +L + Q +T+ KE+L Sbjct: 361 RRKAEDDGIDLDDDVVEFIAQSIESNIRELEGALIRLLAHATLHQLDITLDLAKEVL 417 >UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n=16 Tax=Bacteria RepID=DNAA_DEIDV Length = 459 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 104/234 (44%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G N++L A + + ++++ G G++HL+HA ++ Sbjct: 116 TLNPKYTFENFVVGPNNNLAHAAALAVAESPGKAYNPLFIYGDVGLGKTHLMHAVGHYIA 175 Query: 69 QR--GDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 +R + YV + T + + + L+ +D+I+ +AG E + Sbjct: 176 ERFPEKRIEYVSTETFTNELINAIREDKTTQFRNRYRSVDLLLVDDIQFLAGKERTQEEF 235 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K +++++ DRPP+ + L SR +WG I +Q E ++ L++ Sbjct: 236 FHTFNALYENHK-QIILSSDRPPKDIQTLEGRLRSRFEWGLITDIQSPEFETRVAILKMN 294 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A ++P++V + +++ +R L L ++ S + + L Sbjct: 295 AEHNRIDIPQEVLELIARQVTTNIRELEGALMRVVAFSSLNNVPFSRAVASKAL 348 >UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepID=Q5ZRS8_LEGPH Length = 245 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 100/233 (42%), Positives = 147/233 (63%), Gaps = 1/233 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + QL+L + L D+ T F G+N+ L L +L + +YLW +G+G+SHLL Sbjct: 14 VKMNKQLALAIKLNDEATLDDFNWGNNTLLQQQLIEMLSFKADRLLYLWGPKGSGKSHLL 73 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A C + + Y+PL + P+ ++G+E +L+CID+I IA D WE A+F L Sbjct: 74 QACCQAI-NLTQSAIYLPLAFLKEWGPQSIEGLEDQTLICIDDINTIANDSAWEEALFHL 132 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YN+I +S ++ L+I+G++PP + ++ L DL SRL WG + +L L+D++K+ L++RA Sbjct: 133 YNKIKDSERSLLIISGNQPPIKCDIKLADLRSRLSWGLVIQLNELNDDEKINTLKMRAAK 192 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPE VG FLL R R M L+ L+QLD AS A RK+TIPFVK ILK+ Sbjct: 193 RGFELPESVGHFLLNRCSRNMHDLYEILNQLDDASWEAHRKITIPFVKNILKI 245 >UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n=34 Tax=Proteobacteria RepID=DNAA_AZOSE Length = 481 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L A + Q ++++ G G++HL+HA + Sbjct: 145 RLNADFTFDTLVTGRANDLARAAAMQVAQNPGTSYNPLFVYGGVGLGKTHLVHAIGNAVY 204 Query: 69 QRGDA--VGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV ++ V L L+ ID+I+ + Sbjct: 205 RHNPRAVIRYVHVEDYYADVVRAYQQKSFDAFKRYYRSLDLLLIDDIQFFNNKNRTQEEF 264 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K +++IT D P+ + L SR DWG +++P E ++ LQ + Sbjct: 265 FHAFNALTEARK-QIVITCDTYPKDIQGLEDRLISRFDWGLTVQIEPPELEMRVAILQKK 323 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +L +DV + K L +R L L+++ + R +T+ K+ LK Sbjct: 324 AEALRVDLHDDVAFLIAKNLRSNVRELEGALNKVVAFARFHGRGITLEVAKDALK 378 >UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WL10_9ACTO Length = 591 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 + TF +F GDN+ A + + ++L++ G G++HL+HA Sbjct: 247 RINPRYTFDNFVIGDNNRFATATSLAVAESPGTTYNPLFLYSDSGMGKTHLMHAIGNYAL 306 Query: 69 Q--RGDAVGYVPLDKRTW-FVP--------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T F+ E + + ++ ID+I+ I G + Sbjct: 307 NLFPSIKVRYVSAEEFTNAFINSVRDGHQAEFKNQFRTVDILLIDDIQFIGGRDSTVEEF 366 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + S K +++IT D P LN + SR + G + + E ++ L+ + Sbjct: 367 FHTFNALTNSNK-QIVITSDVSPNLLNGFEERMLSRFNSGVTANIDRPNLETRIAILEKK 425 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A GF +P +V ++ + +R + L ++ + +++ +++ + ILK Sbjct: 426 AHSDGFTVPREVNEYIATHMLTNVREMEGALRRVTAFADLSKQTISLGLAEMILK 480 >UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LGB0_CORK4 Length = 605 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ TF + G+ + ++ A + + + +++W G G++H+LHA + Sbjct: 267 LNENYTFDNLVAGEGNRVVRAAAIAVAENPAQAYNPLFIWGGSGLGKTHILHAIGHRALE 326 Query: 70 --RGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV +++ T + ++ +D+I+ +AG ++ F Sbjct: 327 LRPNLRVRYVSIEEYTNEWINSIRNNRGEDFKRKYRSFDILLVDDIQFLAGKPETQIEFF 386 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + K ++++ DR P++L P L +R WG +Q E ++ L+L+A Sbjct: 387 HNFNALHGAQK-QIVLCSDRSPKELTELEPRLRTRFQWGFTQDIQKPDLETRIAILRLKA 445 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P +V F+ ++ +R L L+++ S +T+ ++ L+ Sbjct: 446 ERENAQVPSEVLSFIAEQKAESVRELEGALNKVLIVSSIQHTPVTLEMARDQLQ 499 >UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSW1_9BACT Length = 469 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 121/242 (50%), Gaps = 16/242 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 + + L + TFA+F G+ + L + + + +Y++ G G++H++ + Sbjct: 127 IVIDPQLNPNYTFATFIEGECNRLARSAGMAVAVDPGHTPFNPLYIYGNSGLGKTHIVQS 186 Query: 63 ACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDE 111 E+ QR V YV ++K +P+ + + + ++ ID+I+ + G Sbjct: 187 IGHEVRQRHPELQVLYVSMNKFQAQFQTAYKNGEIPDFIHFYQMIDVLIIDDIQELTGKT 246 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + A F+++N + +GK +L++T D+PP +L L +R WG +L + K+ Sbjct: 247 GTQNAFFNIFNHLQLAGK-QLILTSDKPPVELKDIEQRLLTRFKWGLSTQLNTPDYDTKV 305 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + ++++A+ G +L +++ R+L + +R + L L ++ +K+++ VKEIL Sbjct: 306 KIIRIKAQKLGLQLTDEIVRYLADNISANVREIEGALSALVANTVYMGKKVSLSLVKEIL 365 Query: 232 KL 233 K+ Sbjct: 366 KV 367 >UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHT5_SORC5 Length = 471 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 16/236 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAAC 64 S+P L TFASF G ++ L A +++ G G++HL+HA Sbjct: 129 SMPDDLNPKHTFASFVVGPSNQLAHAAAIAAAGGGGRRYNPLFICGGTGLGKTHLMHAIA 188 Query: 65 AELSQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDEL 112 + + + YV +K T + E ++ +D+I+ +AG E Sbjct: 189 HRVFEGRPDARIIYVSAEKFTNDFITAIQHHRMDEFRTRYRSSCDVLLVDDIQFLAGREQ 248 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + + ++++T D+ P+ L L SR WG + +Q E ++ Sbjct: 249 TQEEFFHTFNALHTLDR-QIVVTSDKYPQNLERMEERLVSRFSWGLVADIQVPELETRVA 307 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ +A L G L +DV +L + + +R L TL +L S R + +PF + Sbjct: 308 IVRNKAALEGIALTDDVALYLAQMVRSNVRELEGTLIRLAAKSSLTGRPVDLPFAR 363 >UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRG6_9FIRM Length = 467 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 16/231 (6%) Query: 17 ETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQRGD- 72 TF +F GDN+ L A + QE S +Y+++ G G++HLL A +E+ + Sbjct: 132 HTFDTFIVGDNNKLAYAACKAVVQEPSTRYNPLYIYSEPGLGKTHLLSAVKSEMEKLHPD 191 Query: 73 -AVGYVPLDKRTWF----------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + Y D T + L+ ID+I+ +A + +F + Sbjct: 192 MNIIYTTADTFTDDYVSNLRTKSNLEAFKQKYRSCDLLLIDDIQFMANKSETQQELFHTF 251 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + K +++ T DRPP++LN L SR + G + + P E ++ ++ +A L Sbjct: 252 NSLYNQNK-QIIFTSDRPPKELNGIEQRLISRFEQGLLADIAPPEYETRIAIIKRKAELY 310 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP+ + FL +L +R L + +++ ++ T+ +++++ Sbjct: 311 GMNLPDSIVDFLADKLKTNIRQLEGAITKINALTLVTGSTPTLNMAQQVVR 361 >UniRef50_Q83NZ5 Chromosomal replication initiator protein dnaA n=2 Tax=Tropheryma whipplei RepID=DNAA_TROW8 Length = 478 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 98/235 (41%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 + TF +F G ++ L A + ++++ G G++HLLH+ Sbjct: 142 GVNPRFTFDNFVVGKSNELARAASISAAERPGKSFNPLFIYGDSGVGKTHLLHSIGNYAK 201 Query: 69 Q--RGDAVGYVPLDKRT-WFVPE--------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + YV + T F+ + + ++ +D+I+ + + + + Sbjct: 202 FLFPSLRIKYVSSEDFTNDFINSISSGTSQKFQEKYRQIDILMVDDIQFLQKKQETQESF 261 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + S + +L+I+ D PP+QL + SR + G + +Q E ++ LQ + Sbjct: 262 FHTFNSLHNSSR-QLVISSDLPPKQLMGFEDRMRSRFECGLVCDIQKPDLETRIAILQKK 320 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + E+ ++ ++ +R L L ++ + + ++ + +++L+ Sbjct: 321 CQNEKKEVSMEILTYIASCFSSSVRELEGALLRIFALASFNKEEINMTLAQKVLE 375 >UniRef50_Q1GC43 Chromosomal replication initiator protein dnaA n=23 Tax=Lactobacillaceae RepID=DNAA_LACDA Length = 454 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 17/241 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHA 62 + + L L + TF +F G+ + L A + ++++ G G++HL+ A Sbjct: 111 EFTKDLRLNEKYTFENFIQGEGNKLAAGAALAVADNPGTFYNPLFIFGGVGLGKTHLMQA 170 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDG------------MEHLSLVCIDNIECIAGD 110 ++ V + T FV + ++ L+ +D+I+ A Sbjct: 171 IGHQMLAERPDAKVVYIQSET-FVNDFINSIKNKTQDKFREKYRTADLLLVDDIQFFAKK 229 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F + + K ++++T DR P ++ L SR WG ++ P E + Sbjct: 230 EGIQEEFFHTFETLYNDQK-QIVMTSDRLPTEIPDLSERLVSRFAWGLQVEITPPDLETR 288 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + L+ +A G E+ E ++ ++D +R L L ++ + ++ + I + Sbjct: 289 IAILRKKAESEGLEIDESTLDYVASQVDTNIRELEGALVKVQAQATIQKQDINIGLARSA 348 Query: 231 L 231 L Sbjct: 349 L 349 >UniRef50_Q03D55 Chromosomal replication initiator protein dnaA n=45 Tax=Bacilli RepID=DNAA_LACC3 Length = 449 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 95/235 (40%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 +L TF F G + + A + + ++++ G G++HL+ A + Sbjct: 110 HLNPKYTFDHFVIGKGNQMAHAAALAVAEAPGTTYNPLFIYGGVGLGKTHLMQAIGNLVL 169 Query: 69 QRGDA--VGYVPLDKRT-WFVP--------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 A + YV + F+ + ++ L+ +D+I+ E + Sbjct: 170 GNNPAANIKYVTSENFANDFINSIQTKQQEQFRQEYRNVDLLLVDDIQFFGDKEATQEEF 229 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K ++++T DR P ++ L SR + G + P E ++ L+ + Sbjct: 230 FHTFNTLYENMK-QIVLTSDRLPNEIPKLQERLVSRFNKGLSVDVTPPDLETRIAILRNK 288 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +P+D ++ +++ +R L L ++ S +T + LK Sbjct: 289 ADAEDLSIPDDTLSYIAGQIESNVRDLEGALVRVQAFSTMKNEDITTSLAADALK 343 >UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQD8_9BACE Length = 426 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 106/232 (45%), Gaps = 15/232 (6%) Query: 15 DDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACA--ELSQ 69 +D TF F G ++ A + + ++++ G G++HLL+A ++ Sbjct: 89 EDYTFERFVVGSSNKFAHAAALSVAENPGKSYNPLFIYGESGLGKTHLLYAIAHKIHATR 148 Query: 70 RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ D T + E + + +D+++ IAG E + +F Sbjct: 149 PDFRVVYIKGDAFTNELIQAIREGSNQEFREKFRSADVFLMDDVQFIAGRESSQEEMFHT 208 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + E+G+ +++ T DRPP+++ L +R +WG ++P E ++ ++ +A Sbjct: 209 FNTLYEAGR-QIVFTADRPPKEMLRLDDRLKTRFEWGLPVDIKPPDYETRVAIIKNKAIR 267 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 RG ELPE V +++ + + +R + T++++ + + V ++ Sbjct: 268 RGMELPEPVLQYIAENITSNVRQIEGTVNKILAFQELMGESVDVDTVTRAVR 319 >UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNAA_METI4 Length = 454 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L +F +F G NS AA + + + ++L+ + G G++HL+ A + Sbjct: 114 GLNTKFSFENFVVGPNSEFAAAAAKAVAESPAKAYNPLFLYGKVGLGKTHLMQAIGNHIV 173 Query: 69 QRGDA--VGYVPLDKRTWFVPEVLDG---------MEHLSLVCIDNIECIAGDELWEMAI 117 ++ V YV ++ T E + + ++ ID+I+ +AG E + Sbjct: 174 EKNKWILVQYVTSEQFTNEFIEAIQKGSIGQFRKKYRQIDVLLIDDIQFLAGKERSQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + G +++++GD P L L SR +WG ++ P E +L L+ + Sbjct: 234 FHTFNCLFD-GSKQIVLSGDEAPSSLQNLEKRLISRFEWGLTAEILPPGIEVRLAILKHK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-KLTIPFVKEILK 232 + + E + F+ +R+ +R L L++L + + K+T+ + +LK Sbjct: 293 LKNYSLSIDEKILEFIAERIKTNVRQLEGALNRLCAYASIHKEGKITLEETQSLLK 348 >UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4T1_9ACTO Length = 525 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 99/237 (41%), Gaps = 15/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L TFA++ G ++ L + + S ++++ G G++HLLHA Sbjct: 179 DSRLNPRYTFATYVQGKSNRLARTAAAAVAEAPSRAYNPLFIYGGSGLGKTHLLHAIGHY 238 Query: 67 LSQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + G V YV ++ + D ++ ++ +D+++ G E Sbjct: 239 ARKLYPGITVKYVNSEEFVSDFIASVADGQMRNFKDRYRNVDILLVDDVQFFEGKEQTLE 298 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + + K ++++T D+P +L L SR G + +QP E + L Sbjct: 299 EFFHTFNALRIAEK-QIVLTSDQPALELKGFNNRLISRFQEGLVADVQPPDLETRQAILT 357 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+AR G + EDV ++ R+ +R L L ++ + ++ + + LK Sbjct: 358 LKARADGISVTEDVLEYIASRVTTNIRELEGALVRVTAFASLNKQPIDRTLAEVALK 414 >UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultured marine microorganism HF4000_137B17 RepID=B3T283_9ZZZZ Length = 461 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF F G ++ L A + + L+ G G++HL+HA Sbjct: 125 TLNTKYTFGRFVVGKSNELAHAAAEAVSNRPGEVYSPLVLYGAVGLGKTHLMHAIGHRAV 184 Query: 69 QRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 G ++ Y ++ T E D ++ +D+I+ + G E + F Sbjct: 185 ANGLSLIYATTEEFTNEYIKAIGEGRTEEFRDRYRSTDVLLLDDIQFLIGKEQTQEGFFH 244 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + + + +++IT DRP L L + SRL G + +Q E +L L+ +A Sbjct: 245 TFNALHMTNR-QIVITSDRPVSALTLLEDRIQSRLAGGLVVDIQAPDIETRLAILRAKAE 303 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ++ + V FL +R+ + +R L +L+++ + L + VK + Sbjct: 304 TINQDVSQTVLDFLAERIHKNIRELEGSLNRVVAYADLTGSLLDVELVKRAI 355 >UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N6W0_9GAMM Length = 232 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 140/231 (60%), Gaps = 1/231 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 M QL L + L D+ TF +F+ + + Q + I+++ G G SHLL Sbjct: 1 MQVVEQLPLGVQLRDEATFENFYALQSQEVKLQAQLAAIGKGEQSIFIYGESGCGTSHLL 60 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC E Y+PL++ + P V + +E+L L+ +DN++ IAG WE A+F L Sbjct: 61 QAACHEAQTHDLNSVYLPLEELVEYSPAVFESLENLPLIALDNMQAIAGLPAWEEAVFHL 120 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR+ ++G +++ + L + L DL SRL WG +Y+L L++EDK+ AL+LRA Sbjct: 121 FNRVRDNGG-HIIMAANDSIEGLGIKLADLKSRLHWGLVYELPELTEEDKMAALKLRAHN 179 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG EL +DV ++++++++ M +F L+QLD+AS++A+RK+T PFVK+++ Sbjct: 180 RGLELGDDVAKYVVRQMEGHMDKMFEALNQLDKASLSAKRKVTRPFVKDVM 230 >UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n=6 Tax=Helicobacteraceae RepID=DNAA_HELHP Length = 456 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 100/234 (42%), Gaps = 13/234 (5%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L L TF +F G ++ + ++ Q+ + + L+ + G G++HLL+A ++ Sbjct: 116 LSLNPFYTFENFVVGKSNEYAYTIAKLVLQQQASAYNPVLLYGKSGLGKTHLLNAIGNDV 175 Query: 68 SQRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++ V YV + + D + ID+++ G E + + Sbjct: 176 KEKNKNVLYVTSEDFLNDYMDKIKRKTMDSFRDKYRKCDYLLIDDVQFFGGKEGIQEELL 235 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + S K ++++T D+PP+++ L +R +WG + ++ E K+ ++ + Sbjct: 236 HTFNTLHNSQK-QIVMTSDKPPKEIKGLEERLRTRFEWGAMAEITNPELETKIAIIKSKC 294 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L +V ++ + +R + L ++ + ++ K +LK Sbjct: 295 EVNRIVLENEVIDYIASNIYGNIRQIEGILSTINAHINLSPESSSLKIAKNVLK 348 >UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n=16 Tax=Campylobacter RepID=DNAA_CAMJJ Length = 440 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 93/234 (39%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH-----SGYIYLWAREGAGRSHLLHAACAEL 67 L TF SF GD++ + + I+++ G G++HLL A Sbjct: 101 LNPSFTFDSFVVGDSNKYAYGACKAITHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS 160 Query: 68 SQRGDAVGYVPLDKR-TWFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIF 118 + G V Y + F + +G + ++ ID+++ + + + F Sbjct: 161 LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFF 220 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 ++N I + ++++T D PP L L SR G I + P + K+ ++ + Sbjct: 221 FIFNEIK-NNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIRKKC 279 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L D+ ++ L +R + + L+ + +++T+ K ++K Sbjct: 280 EFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMK 333 >UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n=11 Tax=Lactobacillus RepID=DNAA_LACRD Length = 440 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 101/238 (42%), Gaps = 15/238 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACA 65 + L F +F G+ + + A + + ++++ G G++HL+ A Sbjct: 101 MDTPLNPHYNFGTFVVGEGNKMAHAAAFAVAESPGSLYNPLFIYGGVGLGKTHLMEAIGN 160 Query: 66 ELSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 + Q V YV + T ++ + +L L+ ID+I+ +A E + Sbjct: 161 HMLQVNPNSRVKYVTSEDFTNDYINAIRNNTTEQLREEYRNLDLLLIDDIQFLANKEGTQ 220 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 + F+ +N + + K ++++T DR P ++ L SR WG ++ P E ++ L Sbjct: 221 LEFFNTFNALHDR-KKQIVMTSDRIPNEIPELQDRLVSRFRWGLTVEITPPDLETRIAIL 279 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + ++ D ++ ++D +R L L ++ + + ++T + LK Sbjct: 280 RSKVEEDHIDIGNDTLNYIAGQIDTNIRELEGALTKVQAFANLSGERITPSLASQALK 337 >UniRef50_A7H675 Chromosomal replication initiator protein dnaA n=4 Tax=Anaeromyxobacter RepID=A7H675_ANADF Length = 460 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 98/233 (42%), Gaps = 14/233 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 TF +F G+++ A + ++L G G++HLLHA + Sbjct: 125 RPNPRYTFDTFVVGESNRFAFAAAQAVAANPGHTWNPLFLHGDSGLGKTHLLHALAHAIL 184 Query: 69 -QRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++G V V ++ T + + + + +D+++ +AG + F Sbjct: 185 DKQGGRVAIVSSERYTNDFVAALSKGTMDDFRRKYRECTALLVDDVQFLAGKDKTAEEFF 244 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + +++++ DR P++L L SR +WG +++ E + LQ +A Sbjct: 245 HTFNELHD-HHVQIVLSSDRSPKELKGLDARLCSRFEWGMRVQVEAPEFETRAAILQKKA 303 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +LP DV + L + +R L L +L + +T+ +++L Sbjct: 304 EVESIDLPGDVTQLLAAHIRSNVRELEGALMRLAAFASLKSEPITVALARDVL 356 >UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n=44 Tax=cellular organisms RepID=DNAA_SYNS3 Length = 468 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 18/243 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHL 59 P +L L F F G NS + A + + +++ G G++HL Sbjct: 122 APRRLP---GLNMRYVFNRFVVGPNSRMAHAAALAVAEAPGREFNPLFICGGVGLGKTHL 178 Query: 60 LHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIA 108 + A + V YV + T + D L+ +D+I+ I Sbjct: 179 MQAIGHYRLEIDPEARVFYVSTETFTNDLITAIRKDGMQAFRDRYRAADLILVDDIQFIE 238 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G E + F +N + ++G+ +++I DRPP Q+ L SR G I +Q E Sbjct: 239 GKEYTQEEFFHTFNALHDAGR-QIVIASDRPPSQIPRLQERLISRFSMGLIADIQAPDLE 297 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ LQ +A LP D+ +++ R +R L L + S +T+ V Sbjct: 298 TRMAILQKKAEQERVALPRDLIQYISGRFTSNIRELEGALTRAVAFSSITGIPMTVESVA 357 Query: 229 EIL 231 +L Sbjct: 358 PML 360 >UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n=2 Tax=Octadecabacter antarcticus RepID=B5JZC6_9RHOB Length = 454 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 20/250 (8%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 + P + TF SF G + L A + + ++L+ G G++ Sbjct: 102 VRKPTNTLVDAQPDQRFTFDSFVVGKPNELAHAASKRVAEGGPVTFNPLFLYGGVGLGKT 161 Query: 58 HLLHAACAELSQR--GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIEC 106 HL+HA EL +R V YV D+ + + + + ++ +D+I+ Sbjct: 162 HLMHAIAHELGERRPDLNVLYVSADQFIYRFISALRDRKMMDFKQHFRSVDVLMVDDIQF 221 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 + G E + F YN + + GK +++I+ DR P ++ + SRL G + L P Sbjct: 222 LEGKESTQEEFFHTYNALADQGK-QMIISADRAPGEIRDLSERIKSRLQCGLVVDLHPTD 280 Query: 167 DEDKLQALQLRARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 E +L L + + G E+ V FL R+ +R L L++L + R Sbjct: 281 YELRLGILHAKQEMFVNVYPGVEIATGVLEFLAHRISSNVRVLEGALNRLYALASMVGRT 340 Query: 222 LTIPFVKEIL 231 +T+ ++ L Sbjct: 341 VTVEMAQDCL 350 >UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1U5_CAPGI Length = 478 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 105/237 (44%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHAACA 65 L ++ F +F G+++ L + + + G ++++ G G++HL HA Sbjct: 138 DSQLNPNKNFDTFIEGESNRLARSAGKAITERPGGTSFNPLFIFGGVGLGKTHLAHAIGN 197 Query: 66 ELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 E+ ++ + Y+ + T + + + + ++ IDN++ A + Sbjct: 198 EIQEKHPKKRILYIEAEDFTKQYSVAAKNNNRTDFIHFYQQIDVLIIDNVQFFASKPGTQ 257 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK +L++T D+ P + L SR WG +LQ + + + L Sbjct: 258 DVFFQIFNHLHQNGK-QLILTSDKAPVDIQDVEQRLLSRFKWGLSAELQAPDYQMRKRIL 316 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 Q G E+ E++ ++ + + +R L L ++ ++++T+ K+ + Sbjct: 317 QAILYRDGVEMSEEIVDYIAQNVKTNIRELEGVNTSLMAEALFNKKEITLDLAKKAV 373 >UniRef50_D2RCN9 Chromosomal replication initiator protein DnaA n=4 Tax=Bifidobacteriaceae RepID=D2RCN9_GARVA Length = 539 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 M Q +L TF +F PGD++ + + + + ++ G G++ Sbjct: 181 MPVSVQRDAITHLNTCATFDTFVPGDSNRFARTVALAVAEGSGRDFNPLCIYGGSGLGKT 240 Query: 58 HLLHAACAELSQR--GDAVGYVPLDKRTWFVPEVLD--------------GMEHLSLVCI 101 HLL+A + V YV ++ T E L + ++ I Sbjct: 241 HLLNAIGNYALVKDSSLKVRYVTSEEFTNEFIEALQTPNQSQGQIADFNRRYREVDVLLI 300 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 D+I+ + G E F +N + ++ K R++I D P+ L L SR + G Sbjct: 301 DDIQFLGGKEATLEQFFHTFNSLYQANK-RIVIASDVAPKNLKGFEARLISRFESGLTVD 359 Query: 162 LQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 ++P E ++ L++ A + +P DV + +R +R L L ++ + + + Sbjct: 360 IKPPDLETRIAILRMMASMNHCNVPSDVLDLIAERFTENIRELEGALTRVTAVASLSNQP 419 Query: 222 LTIPFVKEILK 232 ++ ++ L+ Sbjct: 420 VSKALAEQALQ 430 >UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n=2 Tax=Acidaminococcus RepID=D2RMT1_ACIFE Length = 386 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 15/242 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLH 61 Q L TF +F G+++ A + +L++ G G++HL++ Sbjct: 39 PQKPFVTNLSPRYTFDNFVVGNSNRFAKAAAMAVANNPAFAYNPFFLFSDSGLGKTHLMN 98 Query: 62 AACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGD 110 A ++ + + Y+ + T + E + + ++ ID+I+ + Sbjct: 99 AIGNQIRKNHPDMKILYISSETFTNELIESVEHNRLEAFREKYRSIDVLLIDDIQFLRNR 158 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F +N + ++ K +++I+ DRPP +L+ + SR + G +Q E + Sbjct: 159 ESTQEEFFHTFNTLEKANK-QIIISSDRPPAELDTLEERMISRFNSGLTADIQHPDLETR 217 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + LQ A P DV + + +R L +++ S ++ +T+ + Sbjct: 218 MAILQNLAHTDKVPFPNDVILLIASSITSNIRELEGAYNRVCAYSTVSKEPITLELCRSA 277 Query: 231 LK 232 LK Sbjct: 278 LK 279 >UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A8SBW1_9FIRM Length = 440 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 15/233 (6%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELSQR 70 + TF +F G ++ A + SG ++++ G G++HLL A E+ + Sbjct: 105 NYEFTFENFIKGPSNQFAFAAAQAVAANPSGAYNPLFIYGGSGLGKTHLLTAIQTEIKRT 164 Query: 71 GDA--VGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + YV ++ T + L+ +D+I+ IAG E + F Sbjct: 165 HPDFVIMYVTCEQFTNELIAAIRAGSTEDFRMKYRVADLLLVDDIQFIAGKESTQEEFFH 224 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + ++ K +++I DRP +++ L +R +WG +QP E ++ ++ +A Sbjct: 225 TFNSLHDAHK-QIVIASDRPAKEIKSLEERLRTRFEWGLTADVQPPDFETRVAIVKRKAE 283 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +LPEDV F+ L +R L + +L+ + + I + +K Sbjct: 284 LLHLDLPEDVAEFIANHLKNNIRQLEGAVKKLNAYYMLEGIQPVISVAQNAIK 336 >UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n=25 Tax=cellular organisms RepID=C6V4C4_NEORI Length = 598 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 20/233 (8%) Query: 18 TFASFWPGDNSSLLAALQNVLRQ------EHSGYIYLWAREGAGRSHLLHAACAELSQR- 70 TF SF G ++ L + + S ++L+ G G++HL+HA + Sbjct: 264 TFDSFVVGKSNELAFTASKRVAEAAELPIPGSNPLFLYGGVGLGKTHLMHAIVWHIKANY 323 Query: 71 -GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ +K + + ++ +D+++ I+G E + F Sbjct: 324 ADRRVIYLSAEKFMHKYITALKNKDMMSFKQIFRSVDVLMVDDVQFISGKESTQEEFFHT 383 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N ++E K +L+I+ DR P L + SRL WG + + + E ++ L+ + Sbjct: 384 FNALIEQNK-QLVISADRSPSDLQGVEERIQSRLSWGLVADINQTTFELRVGILESKLEQ 442 Query: 181 R--GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P+ V F+ + + +R L L+++ S +T+ K++L Sbjct: 443 MKSDIVVPKKVVEFMARNIVSNVRELEGALNKVIAHSEITGSVVTVDSAKDLL 495 >UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YE57_9GAMM Length = 252 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 144/228 (63%), Gaps = 3/228 (1%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L DD TF +F+ GDN+ LL L+ L + Y+YL+ REG+GRSHLL AAC Sbjct: 26 QLPLAVQLRDDATFDNFYSGDNALLLDTLRKQL-SDGERYVYLFGREGSGRSHLLQAACH 84 Query: 66 ELSQRGDAVGYVPLDKRTWFVPE-VLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + G Y+PL + + PE + DG+E+ SLVC+D+++ + LW+ +F L+NR+ Sbjct: 85 HADKNGSNAIYLPLSELGEYPPEELFDGLEYQSLVCLDDVDAVIDKGLWQRQLFHLFNRL 144 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 ++ + LLI+ R LN+ L DLASRL WG +++L L+D+ + ++LRA RG Sbjct: 145 SDA-QIPLLISARCAVRDLNIELQDLASRLSWGTVFQLHNLNDDQRTATIKLRAERRGLL 203 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++V +++ R R+ + L LD LD AS+T QR+LT+PFVK+ + Sbjct: 204 MGDEVAQYIYNRCRRDTQALLSVLDTLDSASLTYQRRLTVPFVKKTMN 251 >UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n=16 Tax=Rickettsiales RepID=DNAA_RICCK Length = 463 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 17/237 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAAL-----QNVLRQEHSGYIYLWAREGAGRSHLLHAACAE 66 L TF +F G + L A ++ S ++L+ G G++HL+HA Sbjct: 125 TLDVRFTFDNFVVGVPNELAYAAARAVAESTDAVSESNPLFLYGGVGLGKTHLMHAIGWY 184 Query: 67 LSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + Q V Y+ +K + V + + ++ ID+I+ I G + + Sbjct: 185 IKQNNPNRKVIYMSAEKFMYQFVKALRNKEVISFKEKFRSVDVLMIDDIQFICGKDSTQE 244 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N ++++ + +++I+ DR P L+ + SRL WG + + + E +L L+ Sbjct: 245 EFFHTFNTLIDNNR-QIVISCDRSPSDLDNIEDRIKSRLGWGLVADVHSTTYELRLGILE 303 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++P++V FL ++ +R L L+++ S +++T+ + IL+ Sbjct: 304 SKIEQMNVKIPKNVIDFLASKIVSNVRELEGALNKVIAHSNFTLKEITLENTQNILR 360 >UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABB5_ALHEH Length = 245 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAA 63 QL+L + D + SF G N L A++ ++L+ + G+SHLL AA Sbjct: 13 VQQLALDIRWTDIASLDSFVAGANQQALDAVRRAAMGFGDRLLFLYGQGPVGKSHLLQAA 72 Query: 64 CAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 C E +RG Y+PL++ P VL GME + L+ +D+++ +AG+ WE F L+N Sbjct: 73 CREAGERGFKAAYLPLNEFQGMPPGSVLAGMESMDLLALDDLQVLAGEADWEEHFFYLFN 132 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R SG ++++ DR P L+L LPDLASRL WG +L+PL D KLQ LQ RA RG Sbjct: 133 RTRASGG-HMILSADRRPVDLSLVLPDLASRLQWGLTLRLEPLDDVGKLQGLQARAAARG 191 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ELP+D GRFLL R R++ LF LD+LD AS+ AQR+LTIPFV+++L Sbjct: 192 LELPDDTGRFLLSRYARDLGGLFQLLDRLDGASLAAQRRLTIPFVRQVL 240 >UniRef50_B8DV06 Chromosomal replication initiator protein dnaA n=17 Tax=Bifidobacterium RepID=DNAA_BIFA0 Length = 583 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 +L ++TF +F GD++ + + + + ++ G G++HLLHA Sbjct: 236 HLNSNDTFDTFIQGDSNRFARTVALAVAEGSGRDYNPLCIYGGSGLGKTHLLHAIGNYAV 295 Query: 69 QRG---DAVGYVPLDKRTWFVPE----------------VLDGMEHLSLVCIDNIECIAG 109 Q V YV ++ T E + ++ ID+I+ + G Sbjct: 296 QNQKPRPRVLYVTSEEFTNDFIESIRTSGQDNEDPAMEKFYRKYREVDVLLIDDIQFLGG 355 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 F +N + ++ K R++I D PP L L SR + G ++P + E Sbjct: 356 KRGILEQFFHTFNSLYQANK-RIVIASDVPPHNLEDFEDRLISRFEQGITVDVKPPNLET 414 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L++ A +P DV + +R +R L L ++ + + +T + Sbjct: 415 RIAILRMLAEQNHIRVPNDVLNLIAERFANNVRELEGALKRVIAMASLNHQPVTRALTER 474 Query: 230 ILK 232 L+ Sbjct: 475 TLQ 477 >UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Z80_COLP3 Length = 235 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSH 58 M AQL+L + LPDDETF SF N ++ L++ + + S YL+ G+SH Sbjct: 1 MKQVAQLTLMVQLPDDETFDSFKSDINQGVVTQLKSYIESQQSTPHSFYLFGLSSVGKSH 60 Query: 59 LLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L+HA+ +Q G + + + EVLDG+E + L+C+D+I IAGD W+ AIF Sbjct: 61 LMHASSTYAAQIGKSSVCLSCAELKQLPVEVLDGLEQIDLICLDDIHLIAGDTRWQQAIF 120 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 DL+NR+LE LLI+GD +QL + LPDL SRL WG +++P+ DE+K+ ALQ RA Sbjct: 121 DLFNRVLEQNNY-LLISGDESAQQLGISLPDLVSRLTWGLTEQVKPVDDEEKVIALQYRA 179 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG L ++V +FLL RL R+M +L +LD LD+ASI QRK+TIPF+KE+L L Sbjct: 180 TQRGLFLSDEVVKFLLNRLSRDMGSLINSLDVLDKASIQEQRKITIPFIKEVLTL 234 >UniRef50_A3EQC2 Chromosomal replication initiator protein dnaA n=4 Tax=Leptospirillum RepID=A3EQC2_9BACT Length = 465 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 15/236 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACA- 65 L F ++ G + A + S YL+ G G++HL+ A Sbjct: 125 NSNLNPRYFFENYVVGVCNQFAHAAAFAIANNPSKAYNPFYLFGSVGLGKTHLVSAIGNC 184 Query: 66 -ELSQRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 V Y+ + + E + + ++ +D+++ ++G E + Sbjct: 185 MIALYPSLKVLYITTESFLNEMVSAIKFNKMNEFRERYRKIDVLIMDDVQFLSGKERTQE 244 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +F +N + E+GK +++++ D P + L SR WG I +Q E K++ L+ Sbjct: 245 ELFYTFNALYENGK-QIILSSDCMPNDIPTLEGRLKSRFGWGLIADIQIPDFETKVEILK 303 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +LP DV FL + +R L + +L + +TI + +L Sbjct: 304 GKMAQEKVDLPMDVVYFLANSIKSNIRELEGAMIRLGAYGNLMGKPITIEVARNLL 359 >UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n=7 Tax=Betaproteobacteria RepID=DNAA_BORA1 Length = 483 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF +F G + L A + + ++L+ G G++HL+HA + Sbjct: 146 RLNTDLTFENFVTGKANQLARAAALQVAENPGTSYNPLFLYGGVGLGKTHLIHAIGNAMV 205 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 G V YV D+ V + L L+ ID+I+ +G + Sbjct: 206 AAGTGVRVRYVHADQYVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKNRTQEEF 265 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F + + + + +++IT D P++L+ L SR D G ++P E ++ L + Sbjct: 266 FYAF-EAMVAQRKQIIITSDTYPKELSGIDSRLISRFDSGLTVAIEPPELEMRVAILLRK 324 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 A G +PE+V F+ K L +R L L ++ + R+ L + KE LK Sbjct: 325 AESEGVPMPEEVAFFIAKHLRSNVRELEGALRKVLAYARFHGREALNVDVCKEALK 380 >UniRef50_B2V628 Chromosomal replication initiator protein dnaA n=5 Tax=Aquificales RepID=B2V628_SULSY Length = 459 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLL-AALQNVLRQEH--SGYIYLWAREGAGRSHLLHAACAEL 67 L L TF + G+N+ + A V ++++ G G++HLLH + Sbjct: 120 LSLNPKYTFDNLIVGNNNKVAFQACLAVTENLGKIYNPLFIYGDVGLGKTHLLHGTAYHV 179 Query: 68 SQRGDAVGYVPLDKRTW-----------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + + + T+ + E + L+ ID+I+ + G E ++ Sbjct: 180 LAKSSSAKIIYTTADTFASELFSYLEKGMILEFRKKYREVDLLLIDDIQFLVGKERTQIE 239 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 + ++N + GK +++++ D+PP +LN L SR G I ++ E K+ Sbjct: 240 FYHIFNVLYSLGK-QIILSSDQPPSKLNGIEKRLISRFSSGLIVEITKPDLETKINITLK 298 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + E DV F+ K ++ +R L ++ +L S R +T+ + +LK Sbjct: 299 KMKELNVEFSRDVVLFIAKTVNTSVRELEGSIKRLKAYSEIMGRPITLDVARTVLK 354 >UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n=5 Tax=Bacteria RepID=B1ZWG9_OPITP Length = 467 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G N+ + A + Q ++++ G G++HL+HA + Sbjct: 130 TLNPRNTFETFVVGSNNQMAHAAALAVAQAPAQAYNPLFIYGDTGLGKTHLMHAIGHAIL 189 Query: 69 QRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ +K T + + H+ ++ ID+++ +AG E + Sbjct: 190 RNNPDARVAYLSTEKFTNEFIQALQENSLTKFRQRYRHVDVLLIDDVQFLAGKERIQEEF 249 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ESGK +++++ DR ++ L SR +WG +Q E +L L+ + Sbjct: 250 FHTFNDLFESGK-QVVLSSDRRASEIQKLESRLVSRFEWGLPADIQAPDFETRLAILRSK 308 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A F+LP + F+ + + + +R L L ++ S + L + + +L+ Sbjct: 309 AACMKFDLPAPILNFIAQNISKNIRRLEGALIKVASYSALTSKPLDLATTEMLLQ 363 >UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n=39 Tax=Bacteroidales RepID=DNAA_BACFN Length = 476 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 107/247 (43%), Gaps = 16/247 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGR 56 + PA L +L + F +F G ++ L ++ + + + ++L G G+ Sbjct: 120 LRAPAVQDLDPHLNPNYNFETFIEGYSNKLSRSVAEAVAENPAKTVFNPLFLHGASGVGK 179 Query: 57 SHLLHAACAELSQ--RGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIE 105 +HL +A + + V YV + ++ + + ++ ID+I+ Sbjct: 180 THLANAIGTRIKELYPDKRVLYVSAHLFQVQYTDSVRNNTTNDFINFYQTIDVLIIDDIQ 239 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 AG + F ++N + ++GK +L++T DR P L L +R WG + +L+ Sbjct: 240 EFAGVTKTQNTFFHIFNHLHQNGK-QLILTSDRAPVLLQGMEERLLTRFKWGMVAELEKP 298 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 + E + L+ + G + P +V ++ + ++ +R L + + S +++ + Sbjct: 299 TVELRKNILRNKIHRDGLQFPSEVIDYIAENVNESVRDLEGIVISIMAHSTIYNKEIDLD 358 Query: 226 FVKEILK 232 + I++ Sbjct: 359 LAQRIVR 365 >UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPS9_9BACT Length = 470 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 17/245 (6%) Query: 3 TPAQLSLPLYLP--DDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 TP +L P P D +F +F GD++ L A + + ++++ G G+S Sbjct: 122 TPKELKAPNNFPSSDRYSFKNFVVGDSNRLAFATSKAVSESPGFSFNPLFIYGSSGLGKS 181 Query: 58 HLLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIEC 106 HLLHA E + Y+ ++ + + ++ ++ +D+++ Sbjct: 182 HLLHAIAQETLSHNPYHRIEYLSAEEFSNIFIDSIKNQDGHNFRKRFRNVDILLLDDVQF 241 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 + + F +N + K ++++T D P +L+ L SR + GQI + Sbjct: 242 LKNKTKTQEEFFHTFNALYSLNK-QIVLTSDCQPHELDGLEKRLVSRFEHGQIVDVLKPE 300 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 E ++ L+L+ +P +V F+ + +R L L +L + T ++ + Sbjct: 301 FETRVAILRLKRDSMNVHIPNEVLDFIASNIKSHIRKLEGALVRLVTYASTMGYEVNVSL 360 Query: 227 VKEIL 231 +E+L Sbjct: 361 AREVL 365 >UniRef50_D2RMT3 Chromosomal replication initiator protein DnaA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RMT3_ACIFE Length = 462 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 101/243 (41%), Gaps = 16/243 (6%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLL 60 PAQ +L TF +F G ++ + + ++L++ G G++HL+ Sbjct: 117 PAQ-EFDSHLSPKYTFDNFIRGKSNEEAFNFSMGVANAPAKSYNPLFLYSDPGLGKTHLM 175 Query: 61 HAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAG 109 +A + ++ + Y + T + + ++ ++ ID+I+ + Sbjct: 176 NAIGNYIHKKFPQMKILYTSSETFTNELIGAIQHNTNEAFRNKYRNIDVLLIDDIQFLRK 235 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F + + ++ K +++I+ DRPP++L+ L SR G I ++ E Sbjct: 236 KESTQEEFFHTFEALKQADK-QIIISSDRPPKELDTLEERLTSRFMQGLIIEINHPDFET 294 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 + L+ A E P +V + + + +R L ++ + + +T+ ++ Sbjct: 295 RSAILRSMAEKDHLEFPLEVIQLIATNVKTNIRELEGAYTKVHAFANLNHQPVTMELARK 354 Query: 230 ILK 232 LK Sbjct: 355 ALK 357 >UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n=5 Tax=Anaerococcus RepID=C7REZ5_ANAPD Length = 459 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 100/230 (43%), Gaps = 20/230 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG--------YIYLWAREGAGRSHLLHAA 63 L ++ FA+F G ++ + + + S ++++ G G++HL+ A Sbjct: 118 QLEEENIFANFVEGKSNQYALGVSQAVAENISNKSQARLYNPLFIYGESGLGKTHLMQAI 177 Query: 64 CAELSQR--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDEL 112 E+ V Y+ +K T + + + + ++ ID+I+ IAG E Sbjct: 178 AHEILDNRDDAYVMYLSSEKFTNEMISALRSTKNEKFREKYRSVDILLIDDIQFIAGKEG 237 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + +GK +++I+ DRPP+++ L SR WG I + E ++ Sbjct: 238 TQEEFFHTFNDLYNTGK-QIVISSDRPPKEIKHLENRLISRFSWGIIVDIGKPDFETRVA 296 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 LQ + G + ++ ++ + +D +R L L + + R++ Sbjct: 297 ILQKKLDQLGAYIDNNILFYIAENIDTNIRDLEGALSTAIAYAKSDNREV 346 >UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n=2 Tax=Cystobacterineae RepID=Q1DGD6_MYXXD Length = 450 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 106/238 (44%), Gaps = 16/238 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAE 66 P L TF +F D++ L AA + + H +Y++ G G++HLL A Sbjct: 112 PGRLNARFTFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLGKTHLLQAVGNL 171 Query: 67 LSQRGD--AVGYVPLDKRT-WFVPEVLD---------GMEHLSLVCIDNIECIAGDELWE 114 + +R V ++ ++ T +V V + E ++ +D+I+ + E + Sbjct: 172 IWERDPSQRVVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQ 231 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + E K +++T D P ++ L SR G + ++ + E ++ L Sbjct: 232 KEFFYTFNTLYEMNKA-IVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAIL 290 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 Q +A G +LP+ V F+ K + + +R L L +L ++ +T F ++L+ Sbjct: 291 QKKAVAEGLDLPDSVAHFIAKHIQKNVRELEGALVKLSAVHSLTRQPVTEDFASQVLR 348 >UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n=5 Tax=Rhodobacteraceae RepID=DNAA_JANSC Length = 475 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 20/239 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + TFA+F G + L A + + ++L+ G G++HL+HA +L Sbjct: 134 KLNPNFTFANFVVGKPNELAHAAARRVAETLDVTFNPLFLYGGVGLGKTHLMHAIAWDLQ 193 Query: 69 QRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 R + ++ ++ + + ++ +D+++ IAG + Sbjct: 194 DRHPDAKILFLSAEQFMHRFVRALREQDTFNFKETFRSVDILMVDDVQFIAGKTSTQQEF 253 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N ++E GK +++I+GDR P + +ASRL G + + P E +L LQ + Sbjct: 254 FHTFNALVEMGK-QIVISGDRAPVDMEELDNRIASRLQCGLVVDIHPTDYELRLGVLQHK 312 Query: 178 ARLRG-----FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A L G V +L +++ +R L L +L + +R++T+ KE L Sbjct: 313 AELLGAKYPHITFATGVLEYLAQKISSNVRVLEGALTRLFAFADLVRREVTVDLAKECL 371 >UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 Tax=Nitrosococcus oceani RepID=Q3JBV7_NITOC Length = 232 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 95/232 (40%), Positives = 141/232 (60%), Gaps = 2/232 (0%) Query: 3 TPAQLSLPLYLPDDETFASFW-PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 QL LP+ +F +++ N +AA++ + + ++ L G G++HLL Sbjct: 2 VTQQLPLPIGDSGAPSFENYYLAAANRESVAAVERCGQGKGDRFLCLRGPSGVGKTHLLL 61 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 AAC +Q+G+ V YVPL + PE+L G+E + V ID+I+ IAG WE ++ LY Sbjct: 62 AACQIAAQKGERVAYVPLKRAVIMAPEILGGLEVAAFVAIDDIDHIAGYRHWEESLLHLY 121 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N +L+ G+ RLL+ P L+ LPDL SRL WG Y+LQPL D K ALQ +A R Sbjct: 122 N-LLQEGRGRLLLASTDKPSTLHWLLPDLRSRLGWGLGYQLQPLDDHQKHAALQFQAAKR 180 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 G ELP++V FLL+ +R+M +L L QL+RAS+ AQR+LT+PFV+++L + Sbjct: 181 GLELPDEVAGFLLRHSERDMHSLSSILAQLERASMAAQRRLTVPFVRQVLDI 232 >UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n=17 Tax=Acinetobacter RepID=DNAA_ACIBS Length = 465 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%) Query: 13 LPDDETFASFWPGDNSSLLA-ALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF+ F G ++ + A + VL Q ++L+ G G++HL+ A L Sbjct: 129 LNPQFTFSLFVEGRSNQMAAETCRKVLTQLGASQHNPLFLYGPTGLGKTHLMQAVGNALL 188 Query: 69 Q--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q V Y+ + V E L L+ +D+I +AG E + Sbjct: 189 QAKPNARVMYMTSESFVQDFVSSLQKGKVEEFKKNCRSLDLLLVDDIHLLAGKEASLVEF 248 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +L+ K ++++T DR P++L P L SR WG ++P E +++ L + Sbjct: 249 FYTFNALLDESK-QIILTSDRYPKELTELDPRLVSRFSWGLSVGVEPPDIETRIEILLKK 307 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G +LP + F+ +++ +R L L+++ S + + V+E LK Sbjct: 308 AENSGVDLPRNCALFIAQQVVANVRELEGALNKVVAISRFKGAPIDLDVVRESLK 362 >UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ04_9FLAO Length = 484 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 106/239 (44%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 + L D +F S+ G+++ A + + + ++L+ G G++HL A Sbjct: 144 IDSNLKPDYSFDSYVEGESNKFAATVARSIAKRPGATAFNPLFLYGGYGVGKTHLGQAVG 203 Query: 65 AELSQR--GDAVGYVPLDKR-TWFVP--------EVLDGMEHLSLVCIDNIECIAGDELW 113 E+ + V Y+ +K F+ E + + + ++ ID+I+ ++G Sbjct: 204 LEVKNQFPDKVVLYLSSEKFIQQFISAAKAHKQTEFANFYQMVDVLIIDDIQFLSGKSAT 263 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + + F +++ + ++GK ++++T D+ P + + SR WG +++ + Q Sbjct: 264 QDSFFHIFDHLHQNGK-QIILTSDKAPADIMDIQDRIVSRFKWGLSAEIKSPDLSTRRQI 322 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ + G LP D+ FL +R L ++ + S +R L++ +KE + Sbjct: 323 IEDKLSRDGIVLPGDMLDFLAAEAKTNVRELIGVINSVIAYSTVYKRDLSLELLKETIN 381 >UniRef50_C5NVU9 Chromosomal replication initiator protein dnaA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVU9_9BACL Length = 494 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 97/243 (39%), Gaps = 23/243 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQ-NVLRQEHS--GYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G+ ++ + NV ++++ G G++HLLHA E+ Sbjct: 149 TLNKNYTFENFVVGEGNAFTHNIAWNVAVSPGGIYNPLFIYGGVGLGKTHLLHAIGNEME 208 Query: 69 QRGD--AVGYVPLDKR-----------------TWFVPEVLDGMEHLSLVCIDNIECIAG 109 + + +K T + + + ID+I+ ++G Sbjct: 209 ANFPDFKIECISSEKFLNEFLASIKPMKDKNNYTNADEDFRRKYRDVDALLIDDIQFLSG 268 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 + A F +N + + K ++++ DR P QLN L +R G + P E Sbjct: 269 KTETQNAFFHTFNELQMNQK-QIVLISDRSPSQLNDLEDRLVTRFSQGITADITPPDFET 327 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ ++ + +L E+ ++ + +R L L ++ + + + ++ +E Sbjct: 328 RMAIIKFKCEQFDIKLDEETLTYISSNVSSNIRELEGVLKRIKFTATSKHEQPSLSIAEE 387 Query: 230 ILK 232 ILK Sbjct: 388 ILK 390 >UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n=40 Tax=Gammaproteobacteria RepID=DNAA_PSYIN Length = 458 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G +++ A + + ++L+A G G++HLLHA + Sbjct: 121 NLIKKYTFDNFVEGKSNNFAIATTQQIAENPGDVYNPLFLYAHPGLGKTHLLHAVGNAIL 180 Query: 69 QRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 V Y+ ++ + + + L + ID+I AG + + + Sbjct: 181 AENPESKVVYIRSERFVQDMINSIRNNTIEQFKEYYASLDALLIDDIHFFAGKDRSQEVL 240 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +L++ ++++T DR P+++ L +R WG + P E ++ L + Sbjct: 241 FQTFNSMLDA-HQQVILTSDRFPKEIEGIDERLRTRFGWGLSIPIDPPELETRVAILITK 299 Query: 178 ARLRGFELPEDVGRFLLKRLD-REMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A RG +LP+DV F+ KRL ++R L + + + + +TI V++ L+ Sbjct: 300 AEERGLKLPDDVAFFIAKRLTITDVRVLEGAIANISAKAQFTGQGITISLVQDALR 355 >UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteurellaceae RepID=Y122B_HAEIN Length = 231 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 149/228 (65%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL LP++ DD T +F+ +N LL +L+ + Y+W +G+G++HLL A Sbjct: 4 QLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSN 63 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E YVPL K +F VL+ +E LVC+D+++ + G++ WE+AIFDL+NRI Sbjct: 64 EYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIK 123 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 SGKT LLI+ D+ P L++ LPDL SRL WG+IY+L L+DE K++ LQL A RGF+L Sbjct: 124 ASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRGFQL 183 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++ FL+ RL R+M TLF LD LD+AS+ AQR LTIPFVK+IL L Sbjct: 184 SDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL 231 >UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3S7_9DELT Length = 453 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 18/238 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P L F SF G ++ L A+ ++++ G G++HLLH E Sbjct: 115 PTGLHPRYRFDSFIKGASNELAASAAMAASDAPGTRFNPLFIYGGVGLGKTHLLHGIGHE 174 Query: 67 LSQRGDAVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELW 113 L ++ ++ V L F+ E + + + + ID+I+ IAG + Sbjct: 175 LHRKDPSLRIVYLSAE-HFMNEFVTAVRNNQFDEFRARYRKDCDCLLIDDIQFIAGRDRT 233 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 F ++N + E+GK ++++T DR P + L SRL+WG + +QP E ++ Sbjct: 234 MDEFFHVFNALYEAGK-QIVVTSDRVPADMPGMEARLTSRLNWGLVADVQPPDLETRIAI 292 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +Q +A G ELP +V + + + +R L L ++ + + FV+ +L Sbjct: 293 VQAKAERDGMELPAEVCLTIAELVRSNVRELEGALLRVTAFAQLRGVAIDKAFVESVL 350 >UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsulatus RepID=Q604L7_METCA Length = 232 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 140/228 (61%), Gaps = 1/228 (0%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 Q+ L + +TF ++W G N+ A + R E +YLW G G++HL++AAC Sbjct: 3 QQIPLHFAVDPLQTFEAYWAGPNAEAAEAARRSARGEGDTLLYLWGDTGLGKTHLVNAAC 62 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 E G + +PL P VL+GME+ +LVC+D+I+ IAG + WE +F L+N + Sbjct: 63 REAFHNGRSAACLPLALIGECGPAVLEGMENQNLVCLDDIDTIAGRDDWERQLFGLFNAM 122 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 ++G T LLIT PP +L + LPDL +RL WG + +L PL+DE KL AL+ RA + G + Sbjct: 123 RDAGNT-LLITATAPPAELPVALPDLKTRLAWGLVLRLHPLTDEHKLAALERRAGMLGLD 181 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L VGRFLL R+M +L L++LD AS+ A+R+LT+PF+K L+ Sbjct: 182 LSPRVGRFLLSHCRRDMASLQALLEELDHASLAAKRRLTVPFIKGYLE 229 >UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NC96_LEPBD Length = 451 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 20/239 (8%) Query: 12 YLPDDETFASFWPGDNSSLLA-ALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G+NS L A V+ ++++ G G++HL+ A E+ Sbjct: 107 GLNPKHRFDNFIVGENSKLAYNACLAVVNNPTPVYNPLFIYGSSGLGKTHLMQAVGNEIL 166 Query: 69 QRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECI-----AGDEL 112 + V Y ++ + D L ++ +D+I+ G+ Sbjct: 167 ENNPNKRVYYSTSEEFANEFFKVLNGGRIQHFRDTFRALDVLLLDDIQFFEKVFGRGEGT 226 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 E F +N++ E GK ++++ D+ P+++ L SR G ++Q E ++ Sbjct: 227 VEEEFFHTFNKLQELGK-QIIMISDKSPKEIKNLSKRLESRFLSGLTVEIQSPGFETRMM 285 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ A+ + E+ + + ++ L+ +R L TL L+ + K+T+ V+E+L Sbjct: 286 ILKNMAKTQDIEIDDSILEYISDSLNTNVRELEGTLTNLNARAKLLNEKITLQLVQEML 344 >UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSN5_9GAMM Length = 244 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 135/226 (59%), Gaps = 1/226 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + FA F G N+ +AAL+ + + + IYL+ G G+SHLL AAC Sbjct: 14 QLALDFQWDERFDFAGFVAGPNAEAVAALELIGKGDRRRVIYLYGEPGVGKSHLLQAACG 73 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E S G AV Y+PL + P +L +E + +V +D+++C+ W+ A F L+NR+ Sbjct: 74 EASAWGRAVVYLPLRQLVNRSPRLLQELEGVDVVALDDLDCLTKAIEWQQAAFHLFNRLQ 133 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 ++G+ LL+ G R P +L L LPDL SRL + +L+ L DED + AL RA+ RG EL Sbjct: 134 DAGRE-LLMAGPRRPAKLGLALPDLVSRLQGVLVLRLEKLGDEDNVLALSRRAQRRGLEL 192 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 P+ R+LL R+ F LD+ D AS+ AQR+LT+PFVK++L Sbjct: 193 PKATARYLLNHCRRDTGYFFQLLDKFDAASLQAQRRLTVPFVKKVL 238 >UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIX2_FIBSS Length = 441 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 17/237 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHAACAE 66 + L F +F PGD + L + + G ++++ G G++HLL + Sbjct: 101 VPLSGSFRFENFVPGDKAQLAFNAALAVARNPDGTQYNPLFIYGSSGLGKTHLLQSIGNY 160 Query: 67 LSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEH-LSLVCIDNIECIAGDELWE 114 + + V Y+ + + + E+ D + + ++ ID+I+ G + Sbjct: 161 ILEEDPTKRVIYLTSEDFSQQYMKCLQEKRITEMSDFYRNEVDILLIDDIQNWTGKYETQ 220 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK ++++T D P ++ L SR WG +QP E + L Sbjct: 221 NEFFLIFNALHQAGK-QIVLTSDAPAAEVKNLSDRLVSRFSWGLTVDIQPPDVETREAIL 279 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A R E+ ++V R+L + + +R L + +L S + + ++++ Sbjct: 280 HKKAEERHLEISDEVIRYLAENIASNVRCLESAIIKLTLQSSLMSHDIDMNIAQKVV 336 >UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3K6_FLAB3 Length = 488 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 110/241 (45%), Gaps = 16/241 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 +++ L D +F ++ G+++ + + + + ++L+ G G++HL HA Sbjct: 146 INIDSNLKADFSFDNYVEGESNKFASTVARSIAKRPGATAFNPLFLYGGYGVGKTHLGHA 205 Query: 63 ACAELSQ--RGDAVGYVPLDKR-TWFVP--------EVLDGMEHLSLVCIDNIECIAGDE 111 E+ V Y+ +K FV E + + + ++ ID+I+ ++G + Sbjct: 206 VGLEVKNSYPDKVVLYLSSEKFIQQFVSAAKAHKQTEFANFYQMVDVLIIDDIQFLSGKK 265 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + + F +++ + ++GK ++++T D+ P + + SR WG +++ + + Sbjct: 266 STQDSFFHIFDYLHQNGK-QIILTSDKAPVDILDIQDRIVSRFKWGLSAEIKSPDFDTRR 324 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + + + G L ED+ FL + +R L ++ + S + +L++ +KE + Sbjct: 325 KIIVDKLSRDGIVLTEDMLDFLASEVKTNVRELIGVINSVIAYSTVYKSELSLELLKETI 384 Query: 232 K 232 Sbjct: 385 N 385 >UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n=1 Tax=Elusimicrobium minutum Pei191 RepID=DNAA_ELUMP Length = 452 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 19/246 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGRS 57 N A++ P L + TF F G ++ + ++ + + +++ G G++ Sbjct: 101 NYNAKIPFPSRLNPNYTFEGFIEGPSNRFAYRAAEAVVKKLGERENNPLVIYSTPGLGKT 160 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEH------------LSLVCIDNIE 105 HLLHA + + + + FV E ++ +++ L +D+I+ Sbjct: 161 HLLHAIGNRILKENPYAKILYM-SGEEFVSEYIESLQNRNPEAFRKKHRSLDCFLMDDIQ 219 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 +AG E F +N + ES K ++++T DR P+QL + P L+SRL G + +++ Sbjct: 220 FVAGKESSVQEFFYTFNALFES-KKQIVLTSDRTPQQLGI-DPRLSSRLLSGIVSEIKRP 277 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L+ + F++ +DV F+ + + +R L L +L TIP Sbjct: 278 DLETRIAILRQKRDTSNFDVGDDVIAFIAEGVQASIRELEGCLFRLTTYCNIHGVTPTIP 337 Query: 226 FVKEIL 231 +E+L Sbjct: 338 IAREVL 343 >UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n=70 Tax=Streptococcaceae RepID=DNAA_STRT1 Length = 454 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 18/248 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 TP +L L TF +F GD + A + ++++ G G++H Sbjct: 104 QTPDLPTLNSDLNSKYTFDNFIQGDENRWSVAASLAVADSPGATYNPLFIYGGPGLGKTH 163 Query: 59 LLHAACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECI 107 LL+A ++ + Y+ + + E+ HL ++ ID+I+ + Sbjct: 164 LLNAIGNKVLHDNPQARIKYITAENFINEFVLHIRLDKMDELKLKYRHLDVLLIDDIQSL 223 Query: 108 AGD--ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 A + + F+ +N + ++ K ++++T DR P QLN L +R WG + P Sbjct: 224 AKKSTQATQEEFFNTFNVLHDNNK-QIVLTSDRNPDQLNEMEERLVTRFKWGLTVNITPP 282 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ-RKLTI 224 E ++ L + + P + +L + D +R L L + + Q +T+ Sbjct: 283 DFETRVAILTNKIMDYDYHFPPETIEYLAGQFDSNVRDLEGALKDISLVANVRQLDTITV 342 Query: 225 PFVKEILK 232 E ++ Sbjct: 343 EVAAEAIR 350 >UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 Tax=Alteromonadales RepID=Q21MC1_SACD2 Length = 239 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 135/235 (57%), Gaps = 4/235 (1%) Query: 2 NTPAQLSLPLYLPDDETFASFW--PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 +TP QLSL + L ++ TFA+F G N+ +AALQ E + +W G+G +HL Sbjct: 6 STPVQLSLGVSLREETTFANFLGAVGSNAQPVAALQQFAANEGEQNVLVWGAPGSGLTHL 65 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L A C + G AV Y+PL + + DG+E + +VC+D I+ I G + WE +F Sbjct: 66 LQAVCHRAYEHGLAVQYLPLQDMVGYDAQSICDGLEQMQVVCLDGIDHICGIKSWEQGVF 125 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 LYN + ++G RLLI P L L LPDL SR+ Y ++ L+D K AL RA Sbjct: 126 HLYNNLRDAGH-RLLIASHTSPPALPLTLPDLKSRVLGSVRYHVESLNDLQKQDALIARA 184 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG ++P +V RF+L R R+ LF LDQLD AS+ QRKLT+PF KE+L L Sbjct: 185 VARGMDMPVEVARFILNRASRDTNELFYLLDQLDDASLQKQRKLTVPFAKEVLNL 239 >UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SY5_PSEA6 Length = 237 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 95/236 (40%), Positives = 140/236 (59%), Gaps = 5/236 (2%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY-----IYLWAREGAGRS 57 QLSL + L D ETF SF G+N L+ L+++L + + ++ G G+S Sbjct: 1 MSKQLSLAVNLRDTETFDSFIVGENLHLVHRLKSLLNKTLNTKNQPWLTFVSGDHGVGKS 60 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HLL++ C + + Y+ + + PEVLDG+EH L+C+D+ + + + W++A+ Sbjct: 61 HLLYSLCHKAQSANVSAVYLSFKDKQQYSPEVLDGLEHSQLICLDDADALQDSQTWQIAV 120 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR+ E G++ +++ + P LNL L DLASRL WG + L LSDE + AL R Sbjct: 121 FDLLNRVKELGRSHVVVCANGGPTSLNLQLADLASRLAWGVSFTLASLSDEGRCVALLTR 180 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 AR RG +PE V +L+ R+M +L TLD+LD+ S+ QRKLTIPFVKE L L Sbjct: 181 ARQRGLVMPEKVAMYLVNHWQRDMPSLMNTLDKLDQLSLQQQRKLTIPFVKEALNL 236 >UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YPZ2_AZOPC Length = 455 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 106/236 (44%), Gaps = 15/236 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L + +TF +F+ DN+ + + + QE +++ G G++HL HA + Sbjct: 117 NSNLNNRQTFRNFFESDNNKVAYVIAQKVAQEPGKDFNPYFIYGGPGVGKTHLCHAIGNK 176 Query: 67 LSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 +++ V Y+P E + + + ++ +D+I ++G E Sbjct: 177 VTEFHFQKRVIYIPAHLFQIQYTDSIRKHEPNEFIHFYQGIDILILDDIHELSGKEKTLQ 236 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 A F ++N + + G+ ++++T D+ P ++ L SRL WG +LQ E + + L Sbjct: 237 AYFHIFNHLHQLGR-QIILTADKIPAEIIGLEERLTSRLKWGLTIELQKPDLELRKKILN 295 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R R R +PE+V ++ + + R L + L S+ ++ + ++I+ Sbjct: 296 YRIRQRRLSVPEEVIDYIAENVPENARDLEGIVTSLIAYSLVDNCEINLESAQKIV 351 >UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n=14 Tax=Helicobacter RepID=DNAA_HELPJ Length = 457 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELSQ 69 + D TF +F G ++ + + + Q + + G G++H+L+A + Sbjct: 110 VKDSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALE 169 Query: 70 RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + V V + + H +D+ + + G E F Sbjct: 170 KHKKVVLVTSEDFLTDFLKHLDNKNMDSFKKKYRHCDFFLLDDAQFLQGKPKLEEEFFHT 229 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + + K ++++ DR P+ + L SR +WG K+ P E KL ++ + +L Sbjct: 230 FNELHANSK-QIVLISDRSPKNIAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQL 288 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LPE+V ++ + + +R + + ++ + + + K +L+ Sbjct: 289 NKITLPEEVMEYIAQHISDNIRQMEGAIIKISVNANLMNATIDLNLAKTVLE 340 >UniRef50_O87546 Chromosomal replication initiator protein dnaA n=2 Tax=Treponema RepID=DNAA_TREDE Length = 469 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 90/233 (38%), Gaps = 14/233 (6%) Query: 13 LPDDETFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 L + F F G N++ + A V S Y ++ G G++HL+ A ++ Sbjct: 130 LRPEYNFEDFVVGPNNNFGVNAAIAVSTNPGSAYNPFLIYGGVGLGKTHLMQAIGNKIWD 189 Query: 70 RGD-AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 V YV + T +P ++ ID+I G + +F Sbjct: 190 TTKLKVIYVTAENFTNEFVECVQKKMMPAFKSKYRKADVLLIDDIHFFQGKVETQEELFH 249 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + E K +++ T DRPP +L L SR + G LQ + E + L + Sbjct: 250 TFNELYEKNK-QIVFTCDRPPAELKNLSQRLKSRFERGLNVDLQTPAYEIRYAILLKKME 308 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P + + K + +R L L +L + ++ + K +L+ Sbjct: 309 KHSTKIPNEFIDMVAKNVSSNVRDLEAALTKLIAYTELTKKTMDEATAKNLLR 361 >UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUX7_HALHL Length = 241 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 2/227 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY-IYLWAREGAGRSHLLHAAC 64 QL L + F PG+N + L + ++ +YL G G+SHLL AC Sbjct: 2 QLPLNIRWNAAAELDRFVPGENDTALRLVTDLADGLLEAPALYLHGPHGVGKSHLLQGAC 61 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 ++ G Y+PLD+ VLDG E L+ +D+++ + G + W+ A+F LYNR+ Sbjct: 62 RRVTTAGGVAVYLPLDQLLGHGAAVLDGWEQAQLIALDDLDALDGRDEWQGAVFHLYNRV 121 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 +E G RLL G +PP +L L LPDL SRL WG + ++ + L L+ RA RG E Sbjct: 122 VERGG-RLLFAGRQPPAELPLDLPDLRSRLGWGPVVAVREPDETTCLAILRQRAAQRGLE 180 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LP+ R+L++RL RE+ L + LDRAS+ A R+LT+PFV+EIL Sbjct: 181 LPDATARYLIRRLPRELPGLLAFFETLDRASLAAGRRLTVPFVREIL 227 >UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n=6 Tax=Betaproteobacteria RepID=A1VUS9_POLNA Length = 465 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSL-LAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELS 68 L TF + G + + AA +V ++++ G G++HL+HA +L Sbjct: 129 RLNSALTFDTLIEGTANRMGRAAALHVASSLGQLYNPLFIYGGVGLGKTHLMHAIGNKLM 188 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 V Y+ ++ V + + L L+ ID+++ +A + + Sbjct: 189 ADNPAAKVLYIHAEQFVSDVVKAYQRKTFDDFKERYHSLDLLLIDDVQFLANKDRTQEEF 248 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F+ + +L + K+ +++T D P+ L L SR D G ++P E ++ L + Sbjct: 249 FNAFEALL-TKKSHIVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILIRK 307 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G LPE+V F+ K + +R L L ++ S + ++++I +E L+ Sbjct: 308 ADADGAVLPEEVAFFVAKNVRSNVRELEGALRKIQAYSRFSHKEISIQLAREALR 362 >UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKT0_HAHCH Length = 232 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 123/228 (53%), Gaps = 3/228 (1%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 Q++L L + T +F+ + ++ ++Q + G++HLL AAC Sbjct: 7 TQMALRLSNGESATLENFFEPPSGVVVQSIQRFFTASEDTVFSICGASAQGKTHLLMAAC 66 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 R + Y+ L + F VL G+E ++C D+I+ IAG WE A+F L+NR Sbjct: 67 NGF--RSEKCFYLSLREYADFGVHVLAGLESFDVLCFDDIDAIAGQPEWEEALFHLFNRC 124 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E G + LIT P Q LPDL +RL WG+ +L L + ++ L ++A GF Sbjct: 125 RERG-CKWLITSAEAPSQTPFLLPDLKTRLAWGECVRLPELDEVQRINVLDIKAANIGFR 183 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L ++V +++++R R++ +L + L++LD+AS+ +R +T+PFVK ++ Sbjct: 184 LSDEVKQYIMRRAPRDLSSLSLILERLDKASLVEKRPITVPFVKSVMN 231 >UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUK9_THISH Length = 233 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL+L + LPD F +F G N L +L+ + R E +YL+ G+G++HLL AAC Sbjct: 5 QLTLDVTLPDGSDFDAFHAGANGLALDSLRALARGEGERQLYLYGEPGSGKTHLLQAACH 64 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 E S G Y+P L+G++ L LVC+D I + G E +F+L N Sbjct: 65 EASLWGRRAAYLPAFLLRQGGAHALEGLDQLDLVCLDGISALVGCVETETGLFNLINASR 124 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 TRL++ PR L+ LPDL SRL WG +++LQPL D K L RAR RGF+L Sbjct: 125 -CRDTRLVLADTHAPRALSAALPDLGSRLVWGPVFQLQPLDDAGKRAVLVERARRRGFDL 183 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 P +VG FLL+ R++ TL + L++L++AS+ QR++T+PF + +L Sbjct: 184 PGEVGEFLLRTCARDLATLMVQLERLEQASLRDQRRVTLPFARAVL 229 >UniRef50_Q3IIL0 Putative regulatory factor involved in inactivation of DnaA n=3 Tax=Alteromonadales RepID=Q3IIL0_PSEHT Length = 228 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 103/229 (44%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLR--QEHSGYIYLWAREGAGRSHLLHAAC 64 ++LP+ LPDDETF S++ G++S ++ L++ + Y YL +G+SHLL+A C Sbjct: 1 MALPVTLPDDETFTSYFGGEDSLEVSHLKDSFSKLSQSFQYTYLCGLGDSGKSHLLYATC 60 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + +RG + + + + F P VL+G+E L ++CID++ +AGD+ WE A+F+ +NR Sbjct: 61 IQAQERGLSNMLLSMREVIDFGPMVLEGLEALDVLCIDDVHLVAGDDAWEKALFNFFNRF 120 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E K L++T D P LN+ LPDL SRL WG +++ +SD+DK QAL R ++RG E Sbjct: 121 NEPKKM-LVVTADLLPDMLNISLPDLESRLKWGTTLQIRSMSDDDKAQALVKRTKMRGLE 179 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 L ++ RFLL RL R+MRTL LD+LD AS+ AQRKLTIPF+K LKL Sbjct: 180 LSDECARFLLTRLSRDMRTLLDVLDKLDHASMAAQRKLTIPFIKSTLKL 228 >UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=DNAA_KOSOT Length = 447 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 105/237 (44%), Gaps = 21/237 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 L + TF +F G + +L + + + Y +++ G G++HLL A ++ + Sbjct: 103 NLNANYTFENFVVGPENRVLYEVSLEISRNPGRYNPFFVYGMVGLGKTHLLQAIAHKIME 162 Query: 70 RGD--AVGYVPLDKRTWFVPEVLDGME-------------HLSLVCIDNIECIAGDELWE 114 V Y+ ++ F+ +++D ++ ++ ID+I+ + G + Sbjct: 163 LHPEMRVLYITSEQ---FMNDMIDSIKYGSVRDFREHYRKKADVLLIDDIQFLIGKNGVQ 219 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 +F +N + ++GK +++I DR P +LN L SR G + ++ P + + + Sbjct: 220 KELFHTFNELYDAGK-QIVICSDRNPEELNGFHDRLVSRFQMGMVMEICPPEKDTRFKIA 278 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + A LP+DV + L +D +R L + +L S + ++ +IL Sbjct: 279 KKFAERESVSLPDDVAQLLADSVDGNLRILRGVIIKLIVQSSINKERIGAALTNQIL 335 >UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n=3 Tax=Psychrobacter RepID=Q1QEW6_PSYCK Length = 481 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 14/234 (5%) Query: 12 YLPDDETFASFWPGDNSSLLAA----LQNVLRQEHSGYIYLWAREGAGRSHLLHAACAEL 67 YL D TF +F G +++L L + ++++ G G++HL+H+ Sbjct: 145 YLNPDFTFETFVTGKSNNLAYKACYELGKRQSKNRHNPLFIYGPSGLGKTHLMHSVAHRY 204 Query: 68 SQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + Y +K + + ++ + L+ +D+I +AG Sbjct: 205 LKNNQNFYYFTSEKFINQLVYSLRNNKIEDFKKKIKKVDLLIVDDIHVLAGKTKSSNEFL 264 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L+ SG +L++ DR P Q+ SR WG + P + ++Q LQ +A Sbjct: 265 TLF-ADFTSGDKQLILASDRHPSQMTEFDERFRSRFSWGLTVAVDPPEIDTRVQILQRKA 323 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP++ F+ + + +R L L+Q+ + +T+ V+ LK Sbjct: 324 ASYGMSLPKECALFIAQNVVSNVRRLEGALNQVFANANLTGAPITLEMVQYALK 377 >UniRef50_C8N934 Chromosomal replication initiator protein dnaA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N934_9GAMM Length = 444 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 3 TPAQL-----SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH----SGYIYLWAREG 53 +PAQ L D F +F +++ A + H S + ++ G Sbjct: 92 SPAQRNAAPAPFESNLNSDYQFHNFVAAPSNNEAFAAAERVSGGHFFADSNPLLIYGGTG 151 Query: 54 AGRSHLLHAACAELSQRGD-AVGYVPLDKRTWFVPEVL------------DGMEHLSLVC 100 G+SHL+HAA L + G AV Y+ ++ +V E L + + + + Sbjct: 152 LGKSHLMHAAGNALRRNGRTAVMYMNAEQ---YVNEFLAALAGKTQKAFSNRLRSVDALL 208 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ID+++ + G + F +N +++ K ++++T DR P+++ L SR G Sbjct: 209 IDDVQFLGGKTQSQAEFFHTFNELID-KKRQIIMTCDRYPKEIEGLEARLKSRFGAGLTV 267 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS--ITA 218 ++ E + L+ +A+ + F LP+DV F+ + ++ +R L L ++ + Sbjct: 268 SIRAPEPETRFAILKSKAKEQNFPLPDDVAYFIAENIESNVRDLEGALKKVIFQCQVLKK 327 Query: 219 QRKLTIPFVKEIL 231 T+P + L Sbjct: 328 NEPATVPIAQAAL 340 >UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n=1 Tax=Bdellovibrio bacteriovorus RepID=DNAA_BDEBA Length = 471 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 23/239 (9%) Query: 12 YLPDDETFASFWPGDNSSLL-AALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L + TF++F G NS AA NV R + +Y++ G G++HLLHAA + Sbjct: 131 TLNSELTFSTFVVGKNSEFAHAACYNVARNPGADDYNPLYIYGPVGMGKTHLLHAAGNHI 190 Query: 68 SQR--GDAVGYVPLDKRTWFVPEVLDGM-------------EHLSLVCIDNIECIAGDEL 112 ++ + Y+ ++ F+ E + + E+ ++ +D+++ IA E Sbjct: 191 REQYQHLRITYISAER---FMNECISAIRRHEMDKFRQKYRENSDILLVDDVQFIARGEA 247 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F N ++S K ++++ DR P+ ++ +RL+ G I + E ++ Sbjct: 248 VQEEFFHTVNSFIDSRK-QVILASDRMPKDIHGLEDRSRTRLERGLIADITMPDLETRIA 306 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ +A LPEDV ++ + R +R L L ++ S + VK IL Sbjct: 307 ILRYKAEKYNVRLPEDVVNYIARISKRSIRELEGNLKKVKMFSELQGLPIDHELVKRIL 365 >UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFF9_9GAMM Length = 235 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 1/230 (0%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAA 63 QL L + +D F + PG N+ + L+ L IYLW +G G SHLL A+ Sbjct: 7 SPQLPLHVSFAEDAVFEDYLPGQNAIAIGTLRQSLANLTDHLIYLWGAKGVGVSHLLQAS 66 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 +L +G Y+PL + + PE L+G++ L V +D+I+ IA D W+ A+F YNR Sbjct: 67 IHDLQVQGFDAVYLPLSECLEYGPEALEGLDQLHAVALDDIDLIAADAHWQEAVFHFYNR 126 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + +SG+ L++ P QL L L DL SRL G L P++DE+++ + + R RG Sbjct: 127 MRDSGR-HLMVGARCSPLQLPLTLADLKSRLSSGLTISLLPMTDEERVTWVIWKGRRRGL 185 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 + DV FL+ R ++ M+ L T D+LD AS+ +RK+TIPF+K++L L Sbjct: 186 VIGRDVAEFLITRHNQNMKELVTTFDRLDSASLAEKRKITIPFLKQVLGL 235 >UniRef50_Q1PVD7 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVD7_9BACT Length = 472 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 88/231 (38%), Gaps = 14/231 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 + TF +F + + A + +++ G G++HL+HA + Q Sbjct: 139 INKRYTFENFVVAAYNRMAHAAAISVAGSPGYAYNPLFIHGASGLGKTHLMHAINNFILQ 198 Query: 70 RGD-AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 +G Y+ + + ++ ++ +D+I+ F Sbjct: 199 QGRLKTFYLSCEHFVNHYISAIQSNNMEAFRKFYRNVDVLLMDDIQFFENSYGSREEFFH 258 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + GK +++IT + PP + L SR WG + + S E + ++ RA Sbjct: 259 TFNALYNDGK-QIVITSNYPPESIAYMEDRLVSRFKWGLVCGISTPSLETRAAIVEKRAA 317 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 ++ + +L + + +R L + +L + ++ F++++ Sbjct: 318 AWNIKVSHESAVYLAENIPGNIRELEGAIARLSNEAKATNNAVSFDFIRKV 368 >UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCV1_KANKD Length = 229 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 103/231 (44%), Positives = 146/231 (63%), Gaps = 5/231 (2%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L + L D TFA+F G+N LL L+ + + E S +IY+++ +G GRSHLL A Sbjct: 2 QQLPLDIELHSDATFANFMVGENQLLLQKLEAICQGE-SDFIYIYSEQGHGRSHLLQALT 60 Query: 65 AELSQRGDA--VGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 S++ + Y+PL+ VP++LDG+ V +D IE + D+ W+ AIF+LYN Sbjct: 61 HAYSEQNPDKLIAYLPLENSML-VPQMLDGLVAFDCVSLDGIEKVIADKEWQTAIFNLYN 119 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 ++ E GK+ LITG P QL L L DL SRL IY ++PL+DE+KL LQ +A +G Sbjct: 120 QLKEQGKS-FLITGLNAPSQLALELKDLKSRLSAMFIYNIKPLNDEEKLILLQRKAEEKG 178 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 EL +V +LL R R++ TL LD+LD+AS+ A+RKLTIPF+KE+L L Sbjct: 179 LELSNEVAHYLLARQQRDLPTLLGILDKLDQASLQAKRKLTIPFIKEVLGL 229 >UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B720 Length = 459 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 19/240 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLL--AALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAE 66 +L + TF +F G+ + + AAL L+ ++L + G G++HLL+A Sbjct: 113 FDDHLSAELTFDNFVVGNCNRIAQNAALAVALKPGTYNPLFLHSNSGLGKTHLLNAIGNY 172 Query: 67 LSQR--GDAVGYVPLDKRTWFVPEVLDG---------MEHLSLVCIDNIECIAGDELWEM 115 + ++ G + Y + E + + ++ ID+I+ IA E Sbjct: 173 VKKKFPGKRILYTNAEAFVNDYVEAIGNNTIATFNRRYRSVDVLLIDDIQFIANKEGSME 232 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F+++N + SGK +++IT D+PP +L L SR G + E L+ Sbjct: 233 MFFNIFNTLQHSGK-QIVITSDKPPVELKGMENRLVSRFRQGLTVTIDNPEFETAKAILK 291 Query: 176 LRARLR--GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK---LTIPFVKEI 230 + R + + E+V F+ ++++R L + L + + +++ F E Sbjct: 292 KKIESRMIDYPIDEEVLDFIASHFNKDVRDLEGAVTTLLFYKVVCGQNLDHISLDFALEA 351 >UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n=28 Tax=Neisseriaceae RepID=DNAA_NEIG1 Length = 518 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L AA + + +L+ G G++HL+ A EL Sbjct: 181 NLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPFFLYGSTGLGKTHLVQAVGNELL 240 Query: 69 QR--GDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ D F+ V + + L+ ID+I+ I G + Sbjct: 241 KNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF 300 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F LYN + K +L++T D P ++ L SR WG +L+P E ++ LQ + Sbjct: 301 FYLYNHFH-NEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRIAILQKK 359 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 A G + ++ F+ + +R L +++ +S R + I + L+ Sbjct: 360 AEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGASSRFMNRPVIDIDLARTALQ 415 >UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEB2_CHRVI Length = 237 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 3/232 (1%) Query: 1 MNTPA-QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN P QL LPL L + T S+ PG N+ +L A+ + R Y+ L+ G G++HL Sbjct: 1 MNGPTPQLHLPLELRPEPTLESYRPGPNAEVLDAVSALARGAGEPYLLLFGASGTGKTHL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L A+C + + G +VPL P +L+ +E + LV ID+I+CI GD WE A+FD Sbjct: 61 LQASCQTVVRSGRQAHFVPLG-MADLDPAMLENLEQMDLVAIDDIQCIVGDPAWERALFD 119 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L+NR+ E G++ LL D P L LPDLASRL WG Y+L PL D D Q L AR Sbjct: 120 LFNRLREQGRS-LLGATDAAPDSLPFSLPDLASRLLWGPRYRLLPLPDLDCEQLLLESAR 178 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L ++ RF++ R+ +L L +LD S+ QR+ +IP V+ I+ Sbjct: 179 GRGMRLTPELVRFIMSHHARDPASLLDLLARLDSLSLREQRQPSIPLVRRIM 230 >UniRef50_B1MW29 Chromosomal replication initiator protein dnaA n=9 Tax=Leuconostocaceae RepID=B1MW29_LEUCK Length = 448 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 17/235 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ TF F G + A+ + ++ ++ G G++HL+ A S+ Sbjct: 109 LNENFTFDKFVVGTGNENAYAIARAVAEDPGRVYNPYLIYGGVGLGKTHLMQAIGNAYSK 168 Query: 70 RGD--AVGYVPLDKRTWFVPE-----------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 + Y + E + L+ ID+I+ +G E + Sbjct: 169 TTPSARIKYATAEDFLNDFTESLRAGEGATAAFKKEYRTVDLLLIDDIQFWSGKEKVQEE 228 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N + ++GK ++++T D+ P ++ L SR + G +Q ++ L+ Sbjct: 229 FFNTFNVLTKTGK-QIIMTSDKLPTEIVDLQSRLTSRFEAGISMDIQKPDLPTRVAILKN 287 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A G +P DV + ++D +RTL T + + + T ++IL Sbjct: 288 LAETDGLTIPNDVLELIADKIDSNIRTLEGTFHRFEAMLRFRNKPATKETAQQIL 342 >UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEM2_PETMO Length = 454 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 24/252 (9%) Query: 1 MNTPAQLSLPLYL---PDDETFASFWPGDNSSLLA--ALQNVLRQEHSGYIYLWAREGAG 55 +N P + PL L + TF SF G+++ + AL+ ++++ G G Sbjct: 86 VNGPIIKNRPLKLSEFNPEFTFDSFVTGNSNRIAYYSALEVCKNPGKYNPLFIYGDVGLG 145 Query: 56 RSHLLHAACAELSQRGD--AVGYVPLDKRTWFVPEVLDGME-------------HLSLVC 100 ++HLLHA L + V YV + F+ +++DG+ ++ + Sbjct: 146 KTHLLHAIGNFLMENAPDLKVKYVTAE---DFMNQMMDGIRASDMENFRERFRRNVDFLL 202 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ID+++ + G + +F +N + S K +++I DR P +L P L SR + G I Sbjct: 203 IDDVQFLIGKNTVQSELFHTFNSLFNSRK-QIVICSDRTPDELATFHPRLISRFEMGLIT 261 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR 220 +Q K + A++ +L +DV +L + +D +R L + L S + Sbjct: 262 DIQAPDKATKYLIAKKMAQMISLQLTDDVAYYLAEHVDTNLRKLRGAIMNLLLQSQISGA 321 Query: 221 KLTIPFVKEILK 232 I K I+ Sbjct: 322 PANIESAKTIVN 333 >UniRef50_B9Y5K6 Chromosomal replication initiator protein dnaA n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5K6_9FIRM Length = 458 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 18/232 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAELS 68 L D TF +F G ++ + + ++++ G G++HLL+A +S Sbjct: 115 NLIQDYTFDNFVVGGSNRESHSAALACAYNPGQFFNPLFIYGNSGLGKTHLLNAIGNYVS 174 Query: 69 QR--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y + V E + M L ++ +D+I+ +AG E Sbjct: 175 EHAPDKKVYYTTSEDFVNAVVNSIKNGQIQEFKEEMNDLDVLLVDDIQFLAGKEKSHETF 234 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++N ++ + K ++ +T DR P ++ L SR G + E + L+++ Sbjct: 235 FYIFNELV-NNKKQICLTSDRHPTEIKGLEERLISRFSSGLSVGVDSPEFETSVAILKVK 293 Query: 178 ARLRGFE---LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 + + + +DV ++ +++R L L++L SI I F Sbjct: 294 LEKQSVDPSIIDDDVLAYIASNFSQDVRKLEGALNRLLFYSINFSNSTRIDF 345 >UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n=2 Tax=Gammaproteobacteria RepID=Q2Z072_9GAMM Length = 243 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 6/228 (2%) Query: 6 QLSLPLYLPDDETFASFW-PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L ++L DD T +F + L++ALQ+ + + IY++ GAG+SHLL A+C Sbjct: 18 QLPLEIHLRDDATMDNFLTVSRSQPLVSALQHQMDADGEAIIYVYGPPGAGKSHLLQASC 77 Query: 65 AELSQRGDAVGYVPLDKRTWFV-PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 Y+PL + F EV+ G+E L VCID+++ + GD WE+A+F+ N Sbjct: 78 HAGRA---ETLYLPLAELRQFPGQEVMQGVERLDRVCIDDVQAVLGDADWELALFNFCNG 134 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + G R+++ GD PR L + L DL SRL WG +Y+L SDE+K+ L+ RA RG Sbjct: 135 ARQRG-CRMVVAGDAAPRALAVNLADLRSRLSWGIVYQLAEGSDEEKVDILRFRATRRGL 193 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L + V F++ R R L M LDQLD+ S+ QR L+IPFVKE++ Sbjct: 194 SLSKSVATFIVSRAPRATEQLLMVLDQLDKHSLARQRALSIPFVKEVM 241 >UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n=5 Tax=Dehalococcoides RepID=Q3ZAJ3_DEHE1 Length = 445 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 13/232 (5%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 TF SF G + L A Q +Y++A G G++HLL A + Sbjct: 103 PFNPRYTFESFIVGSCNRLAHAASLAATQNPGKSYNPLYIYAAAGLGKTHLLQAIGHLAN 162 Query: 69 QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 YV ++ T E + L+ +D+++ I G E E +F Sbjct: 163 LNRRKALYVSGEQFTTDFISSIRNGQTEEFRARYRDVDLLLLDDVQFIGGKEQTEECLFH 222 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + S + +++I+ D PP+ L L SR +WG +++P ++ +L+ LQL+A Sbjct: 223 TFNDLHNSNR-QIVISADSPPKSLPQLAERLRSRFEWGLTIEIEPPDEKTRLELLQLKAE 281 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G EL D +L + + +R L +L+++ + + +T L Sbjct: 282 QSGTELNMDTLEYLAQEVKHNIRELEGSLNRVLAYARLLRATITPDLAARAL 333 >UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n=4 Tax=Neisseriaceae RepID=D0W8I1_NEILA Length = 559 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L AA + + +L+ G G++HL+ A EL Sbjct: 222 NLSRDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPFFLYGSTGLGKTHLVQAVGNELL 281 Query: 69 QR--GDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ D F+ V + + L+ ID+I+ I G + Sbjct: 282 KNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF 341 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F LYN + K +L++T D P ++ L SR WG +L+P E ++ LQ + Sbjct: 342 FYLYNHFH-NEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRVAILQKK 400 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 A G + ++ F+ + +R L +++ +S R + + + L+ Sbjct: 401 AEAAGISIEDEAALFIANLIRSNVRELEGAFNRVSASSRFMNRPVIDMDLARTALQ 456 >UniRef50_C8P211 Chromosomal replication initiator protein dnaA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P211_ERYRH Length = 471 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 25/256 (9%) Query: 1 MNTPAQLSLPLYLPDD-----ETFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWARE 52 + P Q +P+ + +D +TF +F G ++ + + ++++ Sbjct: 114 VQVPVQPQIPVVIRNDGIAPNQTFDNFVVGPSNKESHSAALGCAYRPGQFYTPLFIYGNS 173 Query: 53 GAGRSHLLHAACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCI 101 G G++HLL+A + + V Y + + + M +L ++ I Sbjct: 174 GLGKTHLLNAIGNYIKKLNPDARVLYTSSSDFVRQVANSIQNRTIEDFKEQMYNLDVLLI 233 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 D+I+ +AG E F ++N ++ K +++IT DR P ++ L SR G Sbjct: 234 DDIQFLAGKEKSHEIFFHIFNELI-YNKKQIVITSDRLPTEIKGLEDRLISRFSSGLSVG 292 Query: 162 LQPLSDEDKLQALQLRARLRGFE---LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + E L L+L+ + + + EDV ++ +++R L L++L SI Sbjct: 293 VDSPEFETSLAILELKIKHKSVDPGLFDEDVLSYIASNFSKDVRMLEGALNRLLFFSIEF 352 Query: 219 QRK--LTIPFVKEILK 232 + + I K Sbjct: 353 SQNDHIDINIAMNAFK 368 >UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ52_9GAMM Length = 446 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 14/234 (5%) Query: 12 YLPDDETFASFWPGDNSSLLAAL----QNVLRQEHSGYIYLWAREGAGRSHLLHAACAEL 67 Y+ TF F ++ + ++ N L Q + ++++ G G++HL+ A E+ Sbjct: 111 YIDPHFTFDQFVTAKSNQIAYSICRETANNLGQSKNNPLFIYGATGLGKTHLMQAIAHEI 170 Query: 68 SQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++G + Y DK T + E D ++ L+ ID+I IAG + Sbjct: 171 LKQGKSFYYFTSDKFVNQLVHSLRTQKIDEFKDKIKKADLLIIDDIHVIAGKQKSSEQFL 230 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L N + K ++++ D+ P L L SRL WG L+P E ++Q LQ ++ Sbjct: 231 LLLNDFMSKNK-QVILASDKHPSALTDFDERLKSRLAWGVAVALEPPELETRIQILQKKS 289 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + LP++ F+ + + +R L L+++ S + + + V+ LK Sbjct: 290 KAQEVILPKECAIFIAQHIIANVRELEGALNKVLAISRLLNQPIHLELVQMALK 343 >UniRef50_D1AIS7 Chromosomal replication initiator protein dnaA n=2 Tax=Fusobacteriaceae RepID=D1AIS7_SEBTE Length = 452 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 23/249 (9%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 Q L L F +F G + L A + Q + ++ G G++HL+H Sbjct: 101 TQKKLINNLNQRYRFENFVVGKGNELANAACIAISQNPGIVYNPLLIYGGSGLGKTHLMH 160 Query: 62 AACAELSQR--GDAVGYVPLDKRT-WFVPE-----------VLDGMEHLSLVCIDNIECI 107 A + + V Y + F+ D L ++ ID+I+ Sbjct: 161 AVGNAILDKDPNKKVLYCTSENFNNEFINSLRAGQFANVQNFRDKFRTLDVLLIDDIQFF 220 Query: 108 -----AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 G E F +N + E GK +++++ DR PR++ + SR D G + Sbjct: 221 EKVFGQGTGSVEEEFFHTFNTLQELGK-QIIMSSDRLPREIRNLSKRIESRFDSGLSVDV 279 Query: 163 QPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 Q E +L L+ A + + ++V F+ + +R L L ++ S ++ + Sbjct: 280 QKPDYETRLAILKNIADSKSVIISDEVLEFISSSISSNIRELEGALTRVIARSTLLRKAI 339 Query: 223 TIPFVKEIL 231 T+ V+E L Sbjct: 340 TLQLVQEDL 348 >UniRef50_UPI0001C311AD chromosomal replication initiator protein DnaA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311AD Length = 453 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAE 66 TF F GD + L A + + ++++ G G++HLLHA Sbjct: 106 DESFNPKYTFDQFVIGDGNRLAHAAALAVAELPGQAYNPLFIYGPPGLGKTHLLHAIANY 165 Query: 67 LSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + GD V Y ++ T V E ++ ID+++ + E Sbjct: 166 VRSYGDGMTVRYTTIEAFTNRFITALRSSSVEEFKRRYRDTDILLIDDVQFLQSKAKTEE 225 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E+G ++L++T DR PR +N L R + G + ++ ++ L+ Sbjct: 226 EFFHTFNALYETG-SQLVVTCDRMPRDMNALAERLRERFESGLVTDIRAPDLATRMTILR 284 Query: 176 LRARLRGFEL-PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R + G +L D + R+ +R L L ++ R + V +L Sbjct: 285 KRVQHDGVQLASPDAIEPIADRITTNIRALQGALIRVVAFHSLTGRPIDRALVTHVL 341 >UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n=4 Tax=Lactococcus lactis RepID=DNAA_LACLM Length = 454 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 8 SLPLYLPDDETFASFWPGDNSSL-LAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAAC 64 L L + F +F G + LAA V + ++++ G G++HL+HA Sbjct: 112 PLVSGLNEKYNFENFVQGPGNRWTLAAAIAVADKPGDTYNPLFIYGGAGLGKTHLMHAIG 171 Query: 65 AELSQRGD--AVGYVPLDKRTWFVPEVLDGMEHLSLVCIDN------------IECIAGD 110 ++ + YV + FV + ++ + +N ++ + Sbjct: 172 NQILTDNPTARIKYVSSE---NFVNDYVNATRKNQMESFENTYRNLDLLLLDDVQFFSDK 228 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F+ +N + + G +++++T DR P++LN L SR WG + E + Sbjct: 229 EGTKNEFFNTFNALYDKG-SQIVLTSDRIPQELNNLEDRLVSRFSWGLTTDITAPDYETR 287 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL-TIPFVKE 229 + L +++ E P + ++ ++D +R L L++++ + + I + Sbjct: 288 MAILLIKSESSHLEFPSETLSYIAGQIDSNVRELEGALNRVEFVARANGISIVDIETASQ 347 Query: 230 ILK 232 L+ Sbjct: 348 ALR 350 >UniRef50_A8F346 Chromosomal replication initiator protein dnaA n=6 Tax=Thermotogaceae RepID=DNAA_THELT Length = 444 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 15/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAA--LQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G N+ + L+ ++L G G++HLL A L + Sbjct: 101 PLNPILTFENFVVGPNNMFAYSTCLEVAKNPGKYNPLFLHGGVGLGKTHLLQAIGHYLFK 160 Query: 70 RGD--AVGYVPLDKRTW---------FVPEVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 V Y+ ++ V E D + + ++ +D+++ + G + + Sbjct: 161 HEPDMRVIYLTSERFLNELVDSIKKNRVQEFRDKFRNKIDVLLLDDVQFLIGKTGIQTEL 220 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + GK ++++ DR P+QL L SR G + K++ +E + Q Sbjct: 221 FHTFNELYNEGK-QIVVCSDRDPQQLEKFQDRLVSRFQMGVVTKIEKPDEETCFKIAQKM 279 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 A+L EL ED+ + + K +R L L +L + K+ + E+L + Sbjct: 280 AQLENAELQEDILKLISKNFSDNLRRLRGALVKLIMYQQISGEKVDLQKAFELLAI 335 >UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNAA_BUCCC Length = 437 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 100/236 (42%), Gaps = 15/236 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHA 62 Q+ L + F +F G ++ L + ++L+ G G++HLLHA Sbjct: 96 QIYLHSEINKKYQFHNFIQGQSNQLAYYSSYKFTKNLKNFYNPLFLYGNTGLGKTHLLHA 155 Query: 63 ACAE--LSQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDE 111 + + + V Y+ + + + + + ++ +D+I+ + + Sbjct: 156 IGNKFLIKNKKKKVIYIHSENFIQNMVNSLKNNSIDKFKNYYRSIDVLLLDDIQFFSNKK 215 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + +F+ +N + + + ++++T D P ++ L SR WG + P + ++ Sbjct: 216 KSQEELFNTFNTLF-NKQQKIVLTADCYPEYISGITEQLKSRFKWGLTISINPPELKTRI 274 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + L +A L +V +++ K++ +R L L ++ SI + K+TI V Sbjct: 275 KILLHKAYENKILLSYEVAKYIAKKIFSNVRELEGILKKIQILSILNKEKITINLV 330 >UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ7_9GAMM Length = 234 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 128/235 (54%), Gaps = 6/235 (2%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPG---DNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 MNT QL L + P+ F +WPG +N L Q R E +L+ E G++ Sbjct: 1 MNT--QLLLGIQAPEYARFERYWPGADSNNCLALELCQQAARNEGERQCFLYGDEAVGKT 58 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HLL AACAE + G + ++PL + + VL G+E LVCID+I IAG WE A+ Sbjct: 59 HLLQAACAEAALNGLSASFIPLREMVTYGCGVLQGLEQQQLVCIDDIHVIAGQAGWEEAV 118 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR E TRLL++ P L DL SRL WG + +L L ++K Q LQ R Sbjct: 119 FDLINRCREQ-DTRLLMSSSIPASSHAFELGDLRSRLAWGPVLQLHELQQDEKWQWLQAR 177 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A RGF + E+ G++L R M L L++LDR ++ QRK+T+P +K+ L Sbjct: 178 AEYRGFFISEESGQYLFAHYPRSMAFLNYALEELDRITLQTQRKVTVPLLKQELN 232 >UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQH3_9RICK Length = 462 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 109/238 (45%), Gaps = 18/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ--EHSGYIYLWAREGAGRSHLLHAACAELSQ 69 + F SF G+++ L + + + H +Y++ G G++H+L+A +L Q Sbjct: 122 RIDPRLNFESFVTGESNQLAFSAAKRVTESLGHYNPLYIYGGVGLGKTHILNAIGNQLKQ 181 Query: 70 RGDAVGYVPLDKRT-WFVPEVLDG--------MEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ ++ FV + + + ++ +D+I+ I+G E+ + F Sbjct: 182 MDKKVIYLSAERFMYQFVKSIKNKDTHKFKEIFRNADVLILDDIQFISGKEVTQEEFFYT 241 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +LE+ +++++I+ DR P +L+ + SRL G + +QP +L+ L+ R Sbjct: 242 FNSLLEN-QSQVVISCDRSPNELDRIQDRIKSRLSGGLVVDVQPPDIGLRLEILKKRCLA 300 Query: 181 RG------FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +++ F+ +R + L+++ ++ + T+ K ILK Sbjct: 301 EKNHFGNEILINDEILSFISNEFKSSVRDMLGVLNRVIASARIQNKTPTLQDAKLILK 358 >UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEK1_9BACT Length = 460 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRS 57 + P + L L D TF +F G + L + + +E +L+ G G++ Sbjct: 115 DAPRRERLDPQLNRDYTFKAFVEGRANKLARVIGLAIAKEPGKPAFNPFFLYGPSGVGKT 174 Query: 58 HLLHAACAEL--SQRGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIEC 106 HL++A + SQ V YVP + + + + + ++ ID+I+ Sbjct: 175 HLVNAIGLRILESQPERRVLYVPAHLFKTQYTDSVLHNTINDFIHFYQTIDVLIIDDIQE 234 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 I + A F ++N + ++G+ +++IT DR P + +R WG + +++ Sbjct: 235 IT-TAKTQQAFFHIFNHLQQNGR-QIIITCDRAPVDFEGIEERMLTRFKWGTVTEMEKPD 292 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 + L + + G + P DV ++ ++ +R L ++ + S+ + Sbjct: 293 VALRRAILTAKIKRDGLKFPPDVIDYIANNVESSVRELQGIVNSIMAYSVVDNCDICQDL 352 Query: 227 VKEIL 231 V++++ Sbjct: 353 VEKVV 357 >UniRef50_C7MEK7 Chromosomal replication initiator protein dnaA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEK7_BRAFD Length = 565 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 100/241 (41%), Gaps = 19/241 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L TF +F G ++ A + + + + ++++ G G++HLLHA Sbjct: 215 DSRLNSKYTFDTFVIGSSNRFAQAAASAVAETPAKAYNPLFIYGGSGLGKTHLLHAVGHY 274 Query: 67 LSQRGDAV--GYVPLDKRT-WFVP-----------EVLDGMEHLSLVCIDNIECIAGDEL 112 V YV ++ T F+ E + ++ ID+I+ + Sbjct: 275 AQSLYPDVVVRYVNSEEFTNEFINSVQSGQFGKAQEFQRRYRDIDILLIDDIQFLQRAPE 334 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 A F +N + S K +++IT D PP++L + SR + G + +QP E ++ Sbjct: 335 TMEAFFHTFNTLYNSDK-QIVITSDLPPKELGGFEDRMRSRFEMGLMTDVQPPDLETRIA 393 Query: 173 ALQLRARLRGF-ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ + E+P +V ++ + +R L L ++ +++ + + + +L Sbjct: 394 ILRKKVAQENTGEVPHEVLEYIASHIATNIRELEGALIRVQALHSLSRQPMDVTLAESVL 453 Query: 232 K 232 K Sbjct: 454 K 454 >UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KA42_THENN Length = 450 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G +S + + ++++ G G++HLL + + Q Sbjct: 107 PLNPAYTFENFVVGPGNSFAYHASLEVAKNPGKYNPLFIYGGVGLGKTHLLQSIGNYIVQ 166 Query: 70 RGD--AVGYVPLDKRTWFVP---------EVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 R V Y+ +K + E + + ++ ID+I+ + G + + Sbjct: 167 REPDLRVMYITSEKFLNDLVDSMKEGKLAEFREKYRKKVDVLLIDDIQFLIGKTGVQTEL 226 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + +SGK +++I DR P L L SR G + KL+P E + + Sbjct: 227 FHTFNELHDSGK-QIVICSDREPHMLKEFQDRLISRFQMGLVAKLEPPDRETRKSIARKM 285 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ELPE+V F+ + +D +R L + +L T R++ + +LK Sbjct: 286 LEVEEGELPEEVLDFVAENVDDNLRRLKGAIIKLLVYKETTGREVDLKEAIALLK 340 >UniRef50_B7J203 Chromosomal replication initiator protein dnaA n=20 Tax=Borrelia RepID=DNAA_BORBZ Length = 487 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 15/217 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 +L TF +F G N+ L + + ++ G G++HLL + + Sbjct: 143 FLKKRYTFENFIIGPNNKLAYNASLSISKNPGKKYNPCLIYGGVGLGKTHLLQSIGNKTE 202 Query: 69 Q--RGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV + E +L ++ ID+I + E + + Sbjct: 203 ELHHNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEEL 262 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E K +L+ T DR P +L L SR G + + E + ++ + Sbjct: 263 FHTFNALYEDNK-QLVFTCDRSPSELTNFTDRLKSRFTRGLNVDISKPNFELRAAIVEKK 321 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 A G +P+++ + +++ +R L + +L Sbjct: 322 AEEDGINVPKNILNLVAQKVTTNVRDLEAAVTKLKAY 358 >UniRef50_D0GPF1 Chromosomal replication initiator protein dnaA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPF1_9FUSO Length = 453 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 20/239 (8%) Query: 12 YLPDDETFASFWPGDNSSLLA-ALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELS 68 L +F GDNS + A VL E ++++ G G++HL+ A + Sbjct: 112 GLNVRNRLDNFIVGDNSRMAYNACLAVLENEAPVYNPLFIYGGSGLGKTHLMQAVGNAIL 171 Query: 69 QRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECI-----AGDEL 112 +R V Y ++ + + D +L ++ +D+I+ G Sbjct: 172 ERNPEKRVLYTTTEEFSNEFIAAIKEGRIKNFRDTFRNLDVLLLDDIQFFERIFGRGMGD 231 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 E F +N++ ESGK ++++ DR P+ + L SR G ++ E + Sbjct: 232 TEEEFFHTFNKLQESGK-QIIMISDRYPQDIKNLSKRLESRFISGLSTEILEPGYETRKA 290 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ ++ E+ +++ ++ + + +R L L ++ + K+T+ V++ L Sbjct: 291 ILENIVEIKNIEIDDNILEYIAESVSSNVRELEGILTLINARAKLLNEKITLQQVQDEL 349 >UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n=14 Tax=Leuconostocaceae RepID=DNAA_OENOB Length = 450 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 101/237 (42%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L + TF ++ GD + L + + ++ + ++ G G++HL+ A Sbjct: 111 DYQLNQNFTFDTWVIGDANELATSAAMAVSEQPGRQYNPLLIYGSSGLGKTHLMEAIGNR 170 Query: 67 LSQRGDA--VGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 L + V Y+ D + E++ L+ +D+I+ + G + ++ Sbjct: 171 LKELQPDAIVRYITTDDFMNDWVNAISKKTTADFTSTYENVDLLLVDDIQMLQGKDRFQE 230 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F+++N+I +S K ++++T D P+ + L SR G Y +Q +L L+ Sbjct: 231 EFFNIFNKITKSQK-QIVMTSDVLPKDIPGLNARLVSRFMQGVAYDIQKPDFPTRLAILK 289 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ G + + +++D +R L + L + A R + + ++IL+ Sbjct: 290 NKSEEVGISIDNQTLTLIAEQIDTNVRELEGAFNTLTLMA-RAGRPINVSNAQKILE 345 >UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDF5_9HELI Length = 440 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 102/234 (43%), Gaps = 14/234 (5%) Query: 12 YLPDDETFASFWPGDNSSLLA-ALQNVLRQEHS-GYIYLWAREGAGRSHLLHAACAELSQ 69 ++ + +F SF G+ + + + + + + ++ G G++HLL+A C + + Sbjct: 102 FINKNVSFNSFIVGECNKFAFETAKEIAKNQGKWNPLLIYGNTGLGKTHLLYAICNAVYE 161 Query: 70 RGDAVGYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 R V + + F + + + ID+++ ++ + ++ F Sbjct: 162 RTPNAKIVYITAESMFNEYRHRIQNNTMQHFRERFRSCDYLLIDDVQFLSNTDKFQEEFF 221 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 + +N I++ G ++++T D+ P+ ++ L SR G + K++ + K+ ++ + Sbjct: 222 NTFNVIVQEGG-QIVMTSDKAPKLIDKLEKRLKSRFAGGMMTKIESPELDMKINIIKQKC 280 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L L ++ F+ +L +R + T+ + +T+ VK ILK Sbjct: 281 ALNNITLEPNIINFIATQLHDNIREIEGTIIDIYANMSIMNIPITLEIVKNILK 334 >UniRef50_C5R9Y2 Chromosomal replication initiator protein dnaA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9Y2_WEIPA Length = 467 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 17/236 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L + F +F D + A+ + + + ++ G G++HL+ A ++ + Sbjct: 130 LNPEFRFETFVSSDENREAYAVAQAVADKPGTQWNPLLIYGGVGLGKTHLMQAIGNKVLE 189 Query: 70 R--GDAVGYVPLDKRTWFVPE-----------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 R V ++ + E L+ +D+++ +AG E + Sbjct: 190 RTPNANVKFITTEDFINDFTEALRRGQKETEAFKREYRSTDLLMVDDVQFLAGKEKIQEE 249 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N I ++++T D+ P+++ L +R G + ++ L+ Sbjct: 250 FFNTFNAITRENH-QIVLTSDKLPKEIPGLEMRLVTRFGQGYSANITKPDLPTRVAILRN 308 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ L +P DV + +D +R L +Q+ + +T+ + IL+ Sbjct: 309 KSDLENLSIPNDVIDEIAAAVDTNVRDLEGVFNQVVGKMRFSNVPVTVETARTILE 364 >UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBI1_9PROT Length = 225 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 9/230 (3%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ-EHSGYIYLWAREGAGRSHLLHAA 63 Q+ L + T +F PG N+ L+ L+++L E +IYLW G G+SHLL A Sbjct: 2 QQMLLDINPLPLPTLENFLPGRNAELIYMLRSILSGKEKECFIYLWGNPGCGKSHLLRAI 61 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 +++ Y + F + ID+I + + +F LYNR Sbjct: 62 VTAYARKNAKSVYHCAENHYPFRSD-----SAADCFAIDDIHGLGA--AGQAELFSLYNR 114 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + E G LL++G P L+ DL +RL WG +Y++ L++E+K QA+Q A GF Sbjct: 115 LREDGHALLLVSGSTAPAYLD-MRQDLVTRLGWGLVYQVHELTEEEKTQAMQTHAADCGF 173 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 LP+++ +LL+ R++ +L MTLD L+R S+ QR +TIP ++E+L++ Sbjct: 174 TLPQEICVYLLRHGRRDLPSLMMTLDALNRYSLVHQRPITIPLLRELLQV 223 >UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0S4_9BACT Length = 495 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 14/236 (5%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAE 66 L L F G N+ L + +E +++ G G++HLL Sbjct: 155 ALGLNKGLLLEDFVIGPNNRLAYTAALEMIKEEYPPFNPLFIHGNVGVGKTHLLVGIWNR 214 Query: 67 LS-QRGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + ++ Y+ +K T + ++ + ID++ ++ + + Sbjct: 215 VRKEQTVNAVYMSAEKWTNEFIYALQKGKMESFRQRYRNVDVFLIDDVHFLSNKQGVQEE 274 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 +N + +S K R++ D P+Q++ +LASR G + +++ +L L+ Sbjct: 275 FLHTFNALYDSSK-RIIFASDAHPKQISQLKENLASRFMSGMVARIERPEYATRLLILRT 333 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A PE+ ++ ++ D +R + L L + RK+ I FVK++LK Sbjct: 334 KASKYDVYFPEEALEYIAEKFDDSVREVESALVTLTAHARFNDRKIDIAFVKDVLK 389 >UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n=3 Tax=Prevotella RepID=C9PTA5_9BACT Length = 469 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 108/239 (45%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 L L +TF+++ GD++ L ++ + + + ++++ G G++HL++A Sbjct: 127 LDPQLNPHQTFSNYIEGDSNKLSRSVGLSIAEHPNTNQFNPMFIYGPSGCGKTHLVNAIG 186 Query: 65 AELSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + Q V Y+ + + + + ++ +D+++ A + Sbjct: 187 VQTKQLYPQKRVLYISAHLFQVQFVNAVLKNATNDFIKFYQTIDMLIVDDVQTWASADKT 246 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F ++N + +GK R+++ DRPP +LN L +R G I +L+ + + + Sbjct: 247 QETFFHIFNHLFRNGK-RIILASDRPPVELNDMSDRLITRFSCGIIAELEKPNVQLCVDI 305 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L + R G ++P +V +F+ + + +R L ++ L S+ + + + ++K Sbjct: 306 LNAKIRRDGLKIPAEVTQFIAETANGSVRDLEGVINSLMAYSVVYNSDIDMRLAERVIK 364 >UniRef50_Q2Y5R8 Regulatory inactivation of DnaA Hda protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5R8_NITMU Length = 224 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 9/216 (4%) Query: 18 TFASFWPGDNSSLLAALQNVLR-QEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGY 76 T ++F G N+ LL L N+L ++H ++Y+W G G+SHLL + + Y Sbjct: 14 TLSNFVTGRNAELLQTLDNLLMMRKHERFVYIWGGTGCGKSHLLQGVASACKRNDMNTLY 73 Query: 77 VPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITG 136 +RT F V +D+++ + D ++ +F LYNRI + G+ LL++G Sbjct: 74 FACGERTSFANG-----SEADCVMVDDVDRLGAD--AQIGLFHLYNRIRDEGQAFLLVSG 126 Query: 137 DRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKR 196 P QL L DL +RL WG +Y++ L+DE+K++A++ A RG LP++V +LL+ Sbjct: 127 SVAPTQLKLR-ADLLTRLAWGLVYEVHELTDEEKMEAMKSHASSRGLALPQEVCDYLLRH 185 Query: 197 LDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 R++ +L L+ LD+ S+ + RK+T+P V+E+L+ Sbjct: 186 ERRDLTSLMAKLNALDKYSLASHRKITVPLVRELLQ 221 >UniRef50_Q1V1G7 Chromosomal replication initiator protein dnaA n=4 Tax=root RepID=Q1V1G7_PELUB Length = 470 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 104/238 (43%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREGAGRSHLLHAACAELSQ 69 + ++ F +F G ++ L + + H +Y++ G G++HLL++ L + Sbjct: 126 RIDPNKRFDNFITGTSNKLAYEASMKVSENISHYNPLYIYGGVGMGKTHLLNSIGLSLKE 185 Query: 70 RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + V ++ ++ + + + + ++ ID+I+ + G E + F Sbjct: 186 KNK-VMFISAERFMYQFVKSIKSNDMVKFKEYFRNTDILLIDDIQFMNGKEAMQEEFFHT 244 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +L+ G ++++I+ DR P +L+ + SR G + +Q E + + ++ + Sbjct: 245 FNALLDKG-SQVIISADRAPNKLSRIQDRIKSRFAGGLVVDIQKPDYELRNKIVRQKTEE 303 Query: 181 ------RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + E++ +F+ + +R L ++++ S + + VK +LK Sbjct: 304 LNIFYSNQVNISEEIQKFISTEITTSIRELVGAINRVVSFSRIYNKVPNLSEVKVVLK 361 >UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N9A5_9GAMM Length = 234 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 138/228 (60%), Gaps = 3/228 (1%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL+L L + F ++ + AL++ R ++ ++YL+ G G++HLL A Sbjct: 6 TQLTLRLSPQEIYHFDNYLFAKTETE-RALESFCRLDNLDFLYLYGETGTGKTHLLIACA 64 Query: 65 AELSQRGDAVGYVPLDKRTWFV-PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 ++ + G V Y+ L + P VL +E L+C+D++E +AG++ WE+A+F +NR Sbjct: 65 EKVQKLGFRVIYLSLAELIQTSEPAVLQSLEQADLLCLDDLEAVAGNKEWEVALFHCFNR 124 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + ++ K LL++ + P + LPDL SRL G +Y+L +SDE K QAL L+++ RG Sbjct: 125 LHDA-KGSLLVSAEHNPANSQIQLPDLCSRLATGLVYQLTTMSDEQKQQALILQSQKRGL 183 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +DV ++LL+ R+M L L QLD+AS+ A+RKLTIPF++++L Sbjct: 184 TMNDDVAQYLLRHYGRDMPALMSVLQQLDKASLQAKRKLTIPFIRQVL 231 >UniRef50_A4ACL3 DnaA-like protein hda n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACL3_9GAMM Length = 234 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 8/230 (3%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 QL+L + L D+ TF +F P + L A L ++ R +L G G+SHLL A Sbjct: 10 QSPQLALKIGLRDEATFENFCPRPS--LAAVLDSMTRPAAEPLQFLHGAAGEGKSHLLQA 67 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 C + Y+PL + P +L+ +E +L+ +DN+E IAGD WE A+F L Sbjct: 68 LCHATA----GALYLPLAELRGAHPGALLENLETAALLALDNLEHIAGDGEWEEALFHLM 123 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NR + + L + P L + LPDL SRL G + + P +DE+ + LQ RA R Sbjct: 124 NRAR-AAQCPLWVAARSPAMDLGIELPDLRSRLGGGVTWAMTPANDEEMRRILQFRAERR 182 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G +P+ V +L R R + L TL++LD AS+ QR LT+P V+E++ Sbjct: 183 GLAMPDAVASYLCARETRALGDLMDTLNRLDNASLQRQRPLTVPLVREVM 232 >UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n=2 Tax=Porphyromonas gingivalis RepID=DNAA_PORG3 Length = 473 Score = 219 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHAAC 64 L F +F+ + + + ++ + +++ G G++HL HA Sbjct: 133 FDTQLNSRLNFRNFYQSECNYVARSVAEAIAASPGNTPMNPFFIYGASGVGKTHLCHALG 192 Query: 65 AELSQRGDA--VGYVPL---------DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + + V YV R + + + + + ++ ID+I+ + G + Sbjct: 193 LRVREMHPRLKVLYVSSHLFEMQFTTAARMGTINDFIAFYQQVDVLIIDDIQWLIGKKKT 252 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 ++A F ++N + GK ++++T D+PP LN L +R+ K++ + + + Sbjct: 253 QLAFFQVFNHLYMLGK-QIVLTSDKPPVDLNGMEERLVTRMAGATCVKIERPDLKLRREI 311 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LQ R G L E V F+ + + +R L TL L S+ +++ + F K I++ Sbjct: 312 LQQRTLQSGVRLDESVLNFIAENVCDNVRELEGTLVSLITNSVVVGKEIDLTFAKRIVR 370 >UniRef50_D1W4X4 Chromosomal replication initiator protein dnaA n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W4X4_9BACT Length = 470 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 106/245 (43%), Gaps = 18/245 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSH 58 P Q L L TF ++ GD++ L ++ + + + ++++ G G++H Sbjct: 124 QPQQ--LDPNLNPHLTFNNYIEGDSNKLPRSVGMSIAEHPNKTQFNPMFIYGPSGCGKTH 181 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECI 107 L++A Q V YV V + ++ + + L+ +D+I+ Sbjct: 182 LINAIGMLSKQLYPQKRVLYVSARLFQVQYTNAVLQNSVNDFINFYQTIDLLIVDDIQEW 241 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 + F ++N + +GK R+++ DRPP L L +R G I +L+ + Sbjct: 242 MTATKTQDTFFHIFNHLFRNGK-RIILASDRPPVDLKGMNERLLTRFACGLIAELEKPNL 300 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + + L + + G ++P+DV +++ + + +R L ++ L S+ + + Sbjct: 301 QLCIDILNSKIQRDGLQIPDDVVQYIAQTANGSVRDLQGVINSLLAYSVVYNSVVDMRLA 360 Query: 228 KEILK 232 + +++ Sbjct: 361 QRVIQ 365 >UniRef50_B0N234 Chromosomal replication initiator protein dnaA n=4 Tax=Bacteria RepID=B0N234_9FIRM Length = 448 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 96/241 (39%), Gaps = 19/241 (7%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 + L TF +F G ++ + ++ +++++ G G++HLL+ Sbjct: 98 QETPFRDNLNRTLTFDNFVVGSSNRMAQNAALLVSTNPGSNFNPLFIYSNPGLGKTHLLN 157 Query: 62 AACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGD 110 A + + Y+ V E+ D ++L ++ ID+I+ + Sbjct: 158 AIGNYAKEVNPALRIRYITSKDFVDEVIGAMKGRDGDEIYDKYKNLDILLIDDIQFLFNK 217 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E F ++N ++ + K +++IT D+ P +L L SR + G + + P E Sbjct: 218 EKSSEIFFHIFNELINNNK-QIVITSDKMPEELQGIESRLISRFNSGLSFGIDPPEFETA 276 Query: 171 LQALQLRARLRG---FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-KLTIPF 226 L+ + + +DV F+ +++R+L L +L SI + + F Sbjct: 277 RAILEKKIENLDNPSLIIQDDVVDFMANHYCKDIRSLEGALKRLFFCSIMNHTNNIDMAF 336 Query: 227 V 227 Sbjct: 337 A 337 >UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n=2 Tax=sulfur-oxidizing symbionts RepID=A5CY30_VESOH Length = 430 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 23/249 (9%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGRSH 58 Q + PL+ +D TF + G+ + + + + ++ + G G++H Sbjct: 80 NTKQHTTPLF--EDYTFNNLVLGNANQMAYGATKQIAENIKTSPYNPFIIYGKSGLGKTH 137 Query: 59 LLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECI 107 L+ AA ++ + YVPL + + + + L+ +D+I I Sbjct: 138 LMQAAGHLAKEKNPNIKIIYVPLMDFVRNITSSLRHNTIENIKNFYQSTDLLLVDDIHLI 197 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 AG E + F ++N + SGK +++ T D+PP+ + L +R G L P Sbjct: 198 AGKEKSQEEFFHIFNFLF-SGKKQIIFTCDQPPKNIKSLEDRLKTRFSQGLNLHLTPPEL 256 Query: 168 EDKLQALQLRARLR--GFELPEDVGRFLLKRLDREMRTLFMTLDQLDR---ASITAQRKL 222 E + L +++ + L ED F+ + +R L L +L S + Sbjct: 257 EMRAAILLKKSQNKRININLTEDTALFIASHIASNIRDLEGALLKLKAFVDFSKINHSFI 316 Query: 223 TIPFVKEIL 231 + ++ L Sbjct: 317 SKEIIESAL 325 >UniRef50_A3WKV5 ATPase involved in DNA replication initiation n=2 Tax=Idiomarina RepID=A3WKV5_9GAMM Length = 242 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 139/238 (58%), Gaps = 7/238 (2%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE-----HSGYIYLWAREGAGR 56 P QL+L + LPDDE F ++ N +++ L+ + + L G+G+ Sbjct: 6 QQPQQLTLAVQLPDDENFTTYLEQQNDNVVRWLKQIATKPLSETQGERLTLLSGPSGSGK 65 Query: 57 SHLLHAACAELSQRGDAVGYVPL-DKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 SHLLH+ + L+ + V Y+PL D + +VL G++ +++C+D+I+ + D W Sbjct: 66 SHLLHSIVS-LAGQHTQVMYLPLADLKESNAEQVLAGLDAFNIICLDDIDTVLKDPTWCY 124 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +F L N I ++ RL++T QL++ L DL SRL W ++L PL+D+ K AL Sbjct: 125 ELFKLINTITDAEHCRLMMTAHASASQLSVELADLRSRLQWATAFQLSPLNDDGKASALT 184 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 LRA+ RG +LP DV F+L RL R+M L LDQLD+ASI QRKLTIPFVK++L + Sbjct: 185 LRAQWRGLQLPHDVAIFMLHRLGRDMAGLLAHLDQLDKASIAHQRKLTIPFVKQVLAI 242 >UniRef50_B9ZM52 DnaA regulatory inactivator Hda n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM52_9GAMM Length = 243 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 95/229 (41%), Positives = 134/229 (58%), Gaps = 4/229 (1%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH--SGYIYLWAREGAGRSHLLHAA 63 QL L L L D F+ F+ N+ A+Q + I L G+G++HLL AA Sbjct: 12 QLPLDLRLRDASRFSGFYARGNALARDAVQALSVGTGIQEPQILLHGPSGSGKTHLLQAA 71 Query: 64 CAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 C + +RGD V Y+PL + P VLDG+E LV +D++E + G W+ A+F L N Sbjct: 72 CYQGHERGDPVSYLPLGEVAEAPPMAVLDGLERSCLVALDDLEAVVGRGDWDEALFGLVN 131 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R+ ++G R+L+ PP L + LPDLASRL WG ++++Q D + L RA LRG Sbjct: 132 RLRDAG-CRVLLAAAAPPEGLPVRLPDLASRLAWGPVFRMQRPDDVACKEILAQRAALRG 190 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ELPE V +LL+R R++ TL LD+LD A++ QR+LTIPFV+E L Sbjct: 191 LELPEPVADYLLRRCSRDLSTLLALLDRLDLAALAQQRRLTIPFVREQL 239 >UniRef50_Q1YP64 DnaA family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP64_9GAMM Length = 234 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 5/236 (2%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 MN QLSL + L + TF +F+ + + +L+ E Y Y+ G G SHL+ Sbjct: 1 MNEFQQLSLAIKLDNQATFDNFYA-PTGTPQHLAKMLLQDEGKQYAYVCGSSGTGLSHLM 59 Query: 61 HAAC--AELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 A C A Y+PL + + +VL+G+E LVC+D+++ +AG E W+ + Sbjct: 60 QAVCQQHSTGLNNGAAVYLPLKELCDYPAGQVLEGLESSDLVCLDDLDQVAGREEWQAPL 119 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F+ +NR ESG TRLLIT P L + L DL SRL G +L D D + LQ R Sbjct: 120 FNFFNRCSESG-TRLLITAHTLPDYLEVLLDDLLSRLKSGISLQLMDYKDADLRRLLQHR 178 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 A G L ++V RFLL RL R L L++LD S+ QR+LT+PFVK +L + Sbjct: 179 ASGLGLYLSDEVARFLLHRLPRNSHLLMDALEKLDAVSLREQRRLTLPFVKTVLGI 234 >UniRef50_B4X369 Chromosomal replication initiator protein DnaA n=2 Tax=Alcanivorax RepID=B4X369_9GAMM Length = 229 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 2/229 (0%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 AQL L L L + +F G N + +A L + + WA +G G+SHLL Sbjct: 1 MSAQLPLALQLREGNALDNFHAGPNGAAVAGLHEAVEG-VDRQAFFWAGDGQGKSHLLEG 59 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 A G +P + VP+VL+ ME L+ ID+ + AG WE A+F LYN Sbjct: 60 AVRLAQHNGLDACLLPASEIIPLVPDVLESMEQFGLLAIDDCQLFAGLPAWEEALFHLYN 119 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R++ G RLL+T + P + L LPDLA+RL G +Y+L L DED LQ RAR RG Sbjct: 120 RLMSLGG-RLLVTANASPGAMGLMLPDLATRLAAGPVYRLMSLEDEDLQALLQERARARG 178 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L +V +++ R +R L L LDR ++ QR +TIPFVK+ L Sbjct: 179 LRLEPEVAHYIVLRSERSAGALMELLSDLDRLALAQQRSVTIPFVKDAL 227 >UniRef50_B8KF04 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF04_9GAMM Length = 235 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 118/232 (50%), Gaps = 10/232 (4%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI-YLWAREGAGRSHLL 60 N QL L + L D+ TF +F LA L + + + H + +L G G+SHLL Sbjct: 10 NQSPQLPLQIGLQDETTFDNFLA---REALAPLLDSMSRPHCEPLQFLHGAAGEGKSHLL 66 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 A C D Y+PL P ++ +E SL+ +D+++ IAG WE A+F Sbjct: 67 QALCHAT----DGAVYLPLAVLLESPPSDLFQDLESSSLLALDDLDVIAGRREWEEALFH 122 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L NR + + L + RP L L L DL+SRL G + L D DK LQ RAR Sbjct: 123 LINRAR-AAQCPLWMAARRPANDLGLQLADLSSRLAGGVTWALSAADDSDKQAILQFRAR 181 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +G L E V ++ R R + L TLD+LDRAS+ QR LT+P ++E++ Sbjct: 182 RKGLVLSESVAHYVCSRESRALADLMETLDRLDRASLQLQRPLTVPLIREVM 233 >UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n=8 Tax=Bacteria RepID=DNAA_XYLFT Length = 439 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 20/242 (8%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAG------RSHLLH 61 L F +F G ++ L A Q+ ++HL+ Sbjct: 98 PFNGNLDTHYNFDNFVEGRSNQLARAAAWQAAQKPGDRT--HNPLLLYGGTGLGKTHLMF 155 Query: 62 AACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGD 110 AA + Q V Y+ ++ + + + + ID+I+ AG Sbjct: 156 AAGNVMRQVNPTYKVMYLRSEQFFSAMIRALQDKSMDQFKRQFHQIDALLIDDIQFFAGK 215 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 + + F +N + + GK ++++T DR PR++N P L SRL WG + P E + Sbjct: 216 DRTQEEFFHTFNALFD-GKQQIILTCDRYPREVNGLEPRLKSRLAWGLSVAIDPPDFETR 274 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + +AR RG +P++V + K++ +R L L+ L + R +TI F +E Sbjct: 275 AAIVLAKARERGATIPDEVAFLIAKKMHSNVRDLEGALNTLVARANFTGRAVTIEFSQET 334 Query: 231 LK 232 L+ Sbjct: 335 LR 336 >UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYQ5_HALNC Length = 233 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 127/234 (54%), Gaps = 6/234 (2%) Query: 1 MNTP---AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 MNT Q+ L L L + F +N L A + + +++ + G++ Sbjct: 1 MNTSGKMQQIPLDLALNAPHSLDGFIGVENLLLRALITQLALGRGEAQLFIHGAQNCGKT 60 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HL AAC Q+G + Y+ + K + + + H+ L+ +D+++ +AGD+ E + Sbjct: 61 HLAQAACFYAGQQGRSAAYIDVKKNPSQLDHM--NLSHIDLLVLDDVDALAGDDQGEFLL 118 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR+ E + LL+T PP LPDL SRL WG + ++ +K++ L+ + Sbjct: 119 FDLINRLREQ-EIPLLMTASLPPAACGFQLPDLLSRLGWGITMLIHAPNEAEKIELLRRK 177 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A+ RGF+LP + +LL+R R++ +L + LD AS++AQRKLTIPFV+ +L Sbjct: 178 AQERGFDLPFESAVYLLQRSPRDLGSLLKIIQDLDHASLSAQRKLTIPFVRSVL 231 >UniRef50_UPI0000D537C1 Chromosomal replication initiator protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D537C1 Length = 393 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 99/238 (41%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSHLLHAACAELSQ 69 + ++ F +F + L + + + Y +Y++ G G++HLL+A EL Sbjct: 121 RVDPNKRFENFITSSCNKLAFEASTKITENSTQYNPLYIYGGVGMGKTHLLNAIGYELKN 180 Query: 70 RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 R V ++ ++ + + + ++ ID+I+ + G E + F Sbjct: 181 RSK-VMFISAERFMYQFVKAIKSNDMVKFKEYFRDTDVLLIDDIQFMNGKEAMQEEFFHT 239 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +L+ G +++++T DR P +L + SR G + +Q + + + ++ + Sbjct: 240 FNALLDKG-SKIVLTSDRAPNKLARMQERIKSRFSGGLVVDIQKPDLKLRKRIIENKVEE 298 Query: 181 ------RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +++ FL + +R L ++L S ++ + K +LK Sbjct: 299 FKKLYSDQVNLSKELEDFLSSEISNSVRELIGAFNRLISFSRIYKKTPNLSETKIVLK 356 >UniRef50_A9NE65 Chromosomal replication initiator protein dnaA n=2 Tax=Acholeplasma laidlawii RepID=DNAA_ACHLI Length = 452 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF SF G ++ + + + Y++ G G++HL+ A + Sbjct: 103 NLNSTYTFDSFVVGKSNMFAFRMAMKVADQPGAVANPFYIFGDVGLGKTHLMQAIGNYIL 162 Query: 69 QRG--DAVGYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + YV D E + + ++ +D+I+ +A +M Sbjct: 163 DNDVEKRILYVKADNFIEDFVSLLSRNKNKTEEFNAKYKDIDVILVDDIQIMANASKTQM 222 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F L++ + + K +++IT D+P QL +P L +R + G +Q E ++ L+ Sbjct: 223 EFFKLFDYLYLNNK-QIVITSDKPASQLTNIMPRLTTRFEAGLSVDIQIPELEHRISILK 281 Query: 176 LRAR--LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + E+ ED+ F+ + +R + L +L + T ++T+ V+E L Sbjct: 282 RKTATLDANLEVSEDILTFIASQFAANIREMEGALIRLISYAQTFNLEITMNVVEEAL 339 >UniRef50_C3JBQ8 Chromosomal replication initiator protein dnaA n=2 Tax=Bacteria RepID=C3JBQ8_9PORP Length = 471 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 18/244 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSH 58 P Q L TF SF G+++ + +L + E +++ G G++H Sbjct: 127 NPTQW--DTKLLPPFTFDSFIRGESNDVALSLARRICVEPGDAMMNPFFIYGPPGVGKTH 184 Query: 59 LLHAACAELSQRG--DAVGYVP---------LDKRTWFVPEVLDGMEHLSLVCIDNIECI 107 +++A E+ ++ V YV + VP+ + + + ++ +D+I+ + Sbjct: 185 MMNAMGWEILRQHSDLRVLYVTTLQFVQQFTAASKNKKVPDFIKYYQQIDVLLLDDIQEL 244 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + A F+++N + GK ++++T DR N + SR+ +++ Sbjct: 245 EGKERSQQAFFEIFNHLYSLGK-QIVLTSDRSVSDFNALSERIVSRMAGSLTAQIKRPDL 303 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + + L A G L E+V F++K +R + L + ++ + + F Sbjct: 304 CLRREILNKLASQGGVVLTEEVSDFIVKNASHSVREIDGVLSSIFLSASVTGSPIDLSFS 363 Query: 228 KEIL 231 +EIL Sbjct: 364 REIL 367 >UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFZ6_RHOVA Length = 497 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 24/242 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQ-NVLRQEHS-----GYIYLWAREGAGRSHLLHAACA 65 L TF SF G + L A V +Y+ AR G G++HLLHA Sbjct: 150 PLDPRYTFQSFVVGSPNRLAHAAAFQVAESTPEQPLKYNPLYIHARVGMGKTHLLHAIAW 209 Query: 66 ELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 E+ R V Y+ ++ T P + + + L+ ID++E + G + Sbjct: 210 EMKARNPNAKVLYLTAERFMYSFAEALQTRDAPAFKEKLRTIDLLIIDDMEFLQGRTF-Q 268 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 N +++ GK ++++ D P L + SRL G + ++ L + +L+ L Sbjct: 269 QEFCHTLNSLIDGGK-QVVVAADCAPLLLESFDARMRSRLSGGLVAEMSALDFDLRLKIL 327 Query: 175 QLRARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 Q RA RGFE+P DV +L +L R L + +L K+T+ + Sbjct: 328 QRRAAEKISLSRGFEVPGDVLEYLATQLTENGRELEGAITRLHATWQLTGEKVTVDAAEN 387 Query: 230 IL 231 + Sbjct: 388 TI 389 >UniRef50_C9LP67 Chromosomal replication initiator protein dnaA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP67_9FIRM Length = 541 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 97/264 (36%), Gaps = 41/264 (15%) Query: 8 SLPLYLP--------DDETFASFWPGDNSSLLAALQNVLR-------------------- 39 LP+ P DD TF +F G+ + + + + Sbjct: 173 PLPVKSPEKKFSYKFDDYTFDNFVHGNCNEIAFQSAHAIALSCEEYTDSPDTNYSKKKPE 232 Query: 40 QEHSGYIYLWAREGAGRSHLLHAACAELS--QRGDAVGYVPLDKRTW---------FVPE 88 + ++++ G G++HLL A + + +V +V + T + E Sbjct: 233 ASNYNPLFIYGPSGLGKTHLLLAISNYVKTHRPDLSVLFVTSENFTNELIESIRSGKMQE 292 Query: 89 VLDGMEHLSLVCIDNIECIAG-DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGL 147 + + + ID+I+ G E M IF+ +N I ++ ++ T DR P L Sbjct: 293 FREKYRTVDYLLIDDIQFFNGTKESSRMEIFNTFNAIADNDNY-IITTSDRTPSDLKDFH 351 Query: 148 PDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMT 207 L +R G I + P E LQ +A ++ E+V F+ ++ +R L Sbjct: 352 ERLITRFSSGMIAHISPPDFEICSIILQKKAERSHIDMSEEVISFIAGNVNSSVRELEGA 411 Query: 208 LDQLDRASITAQRKLTIPFVKEIL 231 Q+ LT+ ++ L Sbjct: 412 FKQVVGYCQIKNVPLTLENARDAL 435 >UniRef50_O66659 Chromosomal replication initiator protein dnaA n=1 Tax=Aquifex aeolicus RepID=DNAA_AQUAE Length = 399 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 15/207 (7%) Query: 12 YLPDDETFASFWPGDNSSLLA-ALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELS 68 +L T +F G+ + L ++ L S I+++ G G++HLL AA E Sbjct: 78 FLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK 137 Query: 69 QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 +RG V Y D + E + + + L+ +D+++ ++G E ++ F Sbjct: 138 KRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFH 197 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 ++N + K ++++ DR P++L+ L SR + G + +++ L ++ + + ++ + + Sbjct: 198 IFNTLYLLEK-QIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLK 255 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFM 206 EL ++V +LL+ + +R + Sbjct: 256 EFNLELRKEVIDYLLEN-TKNVREIEG 281 >UniRef50_A1TZ76 Regulatory inactivation of DnaA Hda protein n=3 Tax=Marinobacter RepID=A1TZ76_MARAV Length = 232 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 2/228 (0%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS-GYIYLWAREGAGRSHLLHAA 63 +Q+ L + L DD F +F N S L+ V R+ + + G+SHLL A Sbjct: 4 SQMVLGVKLRDDARFDNFHGDRNRSAAQWLELVCREPSGLPVVVICGDSDTGKSHLLQAI 63 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 C E Q G + + + F P+ L G++ ++C+D++E A D WE A+F LYNR Sbjct: 64 CHESEQMGKTAVCISIVELLPFGPDALAGLDSHDVICLDDLEHAAADPGWEEAVFHLYNR 123 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 +L+ L+++ P L GL DL SRL G + +L DED+ + L RA RG Sbjct: 124 VLDRNGL-LVVSLSEVPASLPFGLADLGSRLAHGLLIQLGVYRDEDRQRILMARAEQRGL 182 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + EDV F+++R R++ L LD LD S+ AQR+LTIPFVK ++ Sbjct: 183 VMSEDVAGFIMRRAPRKLGDLLGLLDTLDENSLQAQRRLTIPFVKAVM 230 >UniRef50_C2MAU1 Chromosomal replication initiator protein dnaA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAU1_9PORP Length = 475 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 105/246 (42%), Gaps = 17/246 (6%) Query: 2 NTPAQLS-LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGR 56 + P QL L +FAS++ G+++ +++ + ++ +++ G G+ Sbjct: 128 SEPRQLPDFDSQLKPQLSFASYYQGESNRTASSIARSIAEKPGQGALNPCFIYGPSGVGK 187 Query: 57 SHLLHAACAELSQRGD--AVGYVP---------LDKRTWFVPEVLDGMEHLSLVCIDNIE 105 +HL HA + + V YV R + ++ + + ++ ID+I+ Sbjct: 188 THLCHAIGLRIRELYPELKVLYVSSHMFEMQYVAATRANTTNDFINFYQQVDVLLIDDIQ 247 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + + ++ F ++N + GK ++++T D P L L SR+ +++ Sbjct: 248 GLIAKKKTQLTFFQVFNHLYMLGK-QIVLTSDTAPVNLAGLEERLISRIAGSLTIEVERP 306 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 + + + L+ ++ G LP ++ ++ + + +R L L + +T Sbjct: 307 DYDLRKEYLRHKSEESGSILPREMIDYIARTVTSSIRGLQGVFFSLITRAAVEGCDITSS 366 Query: 226 FVKEIL 231 FVK+I+ Sbjct: 367 FVKKIV 372 >UniRef50_B2UL60 Chromosomal replication initiator protein dnaA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL60_AKKM8 Length = 468 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 24/240 (10%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L D TF SF ++S + Q ++L+ + G G++HLL A E+ Sbjct: 129 LNDLYTFDSFVVYEDSRFAYQAGLSVAQSERALFNPLFLYGKSGVGKTHLLQAIGHEVLH 188 Query: 70 RGDA--VGYVPLDKRTWFVPEVLDG---------------MEHLSLVCIDNIECIAGDEL 112 + + V YV ++ F E +D ++ +D+++ I+G E Sbjct: 189 QDSSTNVVYVTGEQ---FANEFIDASRTQNGQSFTKLRRKYRKADVLLVDDVQFISGKEK 245 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 ++ + + KT ++I D ++ P LA+RL+ G +L D +L+ Sbjct: 246 TVEEFLHTFDELFHAHKT-IVICADAAACDISNLDPRLAARLESGLTVELNLPDDNARLE 304 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+ + G + +++ FL R+ + +R L L ++ + + I ++++L+ Sbjct: 305 ILRSKRDRAGMNVSDEILEFLASRIQKSVRRLEGALLRVATFTSLSGDMPDIAKIEQLLR 364 >UniRef50_B4RZX5 Chromosomal replication initiator, DnaA like protein to DnaA protein Hda n=2 Tax=Alteromonas macleodii RepID=B4RZX5_ALTMD Length = 245 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 15/243 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---------------GYIYLWA 50 QL LP+ LP DE F SF N +++ L+ + + L Sbjct: 2 QLPLPITLPVDENFDSFVNKGNEEVVSILRQIAEALPYWREAPALGPLSSLQLPLVTLLG 61 Query: 51 REGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGD 110 G+SHLL A C +L+ + + Y+ L+ + ++ +G+E+LSL+ +DNI IAG+ Sbjct: 62 NSAIGKSHLLFATCHQLAGKSVSHLYLNLNDYQAWSLDIFEGLENLSLIALDNIHAIAGN 121 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 WE A+FDL+NR++E+ + ++ T P LPDL SRL WG IY + L D + Sbjct: 122 VQWEEALFDLFNRVIETKRALIICTSHLGPSNPAFTLPDLRSRLAWGVIYHVNQLDDGGR 181 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 +A++LRA RG L +FLL +R++++L L +LD S+ Q++L++ VK Sbjct: 182 EEAVRLRAEERGLTLSNQALQFLLHHSERDLKSLMSLLARLDARSLQEQKRLSVAMVKRE 241 Query: 231 LKL 233 L L Sbjct: 242 LNL 244 >UniRef50_C1DC86 DnaA-related protein n=3 Tax=Neisseriaceae RepID=C1DC86_LARHH Length = 223 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 12/227 (5%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L L P F F N ++AAL + + +IYLW G G++HLL Sbjct: 3 QLVLDLTPPPAPAFDHFIAEHNRQIIAALTDA---QGERFIYLWGAAGVGKTHLLQQWVE 59 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRIL 125 + G A Y+ D R +P+ V +D+++ + D+ ++ +F ++N + Sbjct: 60 HANAVGRAAIYL--DARAEKLPDFA---REARCVAVDHVDELEPDD--QITLFSIFNSLR 112 Query: 126 ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 185 +S +LL G PP++L L DL +RL WG ++++Q +SD DKL AL+ A++R + Sbjct: 113 DS-DGQLLTAGREPPQRLKLR-DDLRTRLGWGLVFQVQAMSDADKLAALRRHAQMRLVNV 170 Query: 186 PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 PEDV R+L+ R+M +L +D LD S+ Q+ +T+P VK IL+ Sbjct: 171 PEDVLRWLITHWRRDMASLVSMVDALDHYSLALQKPITVPLVKHILQ 217 >UniRef50_D1BQ77 Chromosomal replication initiator protein dnaA n=3 Tax=Veillonella RepID=D1BQ77_VEIPT Length = 524 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 97/251 (38%), Gaps = 23/251 (9%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSL-LAALQNVLRQEHSGY--IYLWAREGAGRSH 58 N P LSL L F ++ G+ + + A QNV Y ++++ G G++H Sbjct: 170 NVPVDLSL-SNLNPAYRFDNYVTGNANRIPFGAAQNVAEFPGGDYNPLFIYGPSGLGKTH 228 Query: 59 LLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECI 107 L+HA + + V + + E + ++ ++ ID+I+ + Sbjct: 229 LMHAIGNAIKENHPHMKVMSITSENFMNIFVETLQRNQGKLFRNTFRNIDVLMIDDIQFL 288 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 E + +F+ +N +L + K ++++T D P + L SR G I ++ Sbjct: 289 ESRESTKTELFNTFNELLNNNK-QIVLTSDTMPNDMEQFEDRLRSRFQAGYIATMENPDL 347 Query: 168 EDKLQALQLRARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-- 220 E ++ + R + D ++ + +R L +L + QR Sbjct: 348 ETRIAIFRSLLEREYKKNRIIRIDNDSINYVALQFSENVRVLQGAFTKLIGTASIDQRLE 407 Query: 221 KLTIPFVKEIL 231 + + + K L Sbjct: 408 SIDLEYTKHAL 418 >UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBU6_DESAH Length = 469 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 25/252 (9%) Query: 4 PAQLSLP-LYLPDD--------ETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAR 51 P Q++LP L + D TF F GDNS + L Q ++G IYL + Sbjct: 113 PMQMALPGLNIRSDSGRMLKKGYTFDRFVVGDNSDFAYSAALSLAQTSSVNNGAIYLLSD 172 Query: 52 EGAGRSHLLHAACAELSQRG--DAVGYVPLDKRTW---------FVPEVLDGME-HLSLV 99 G G+SHL A + +G D V YV + T + + ++ Sbjct: 173 TGLGKSHLSQAVGHHVISQGFSDKVYYVTAEDFTNEMVSSIKNNTINGFKEKYRRKCDVL 232 Query: 100 CIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI 159 ++++ ++G + + + + ++++ K +++ +G P + L SRL G + Sbjct: 233 ILEDVHFLSGKDATQKELAMTLDYLMDAEK-KIIFSGCYLPDDIPKMNEQLKSRLTLGMV 291 Query: 160 YKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 K+ P + + +++ L+ +++ GF +P DV +L + L +R L L + R S Sbjct: 292 TKIDPPNFKTRVKILKNKSKYDGFVIPNDVTEYLAQELCDNVRQLESGLMGVARKSALLG 351 Query: 220 RKLTIPFVKEIL 231 K+ I + +L Sbjct: 352 EKIDINLARGVL 363 >UniRef50_Q2NKC5 Chromosomal replication initiator protein dnaA n=4 Tax=Candidatus Phytoplasma RepID=DNAA_AYWBP Length = 504 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 98/239 (41%), Gaps = 20/239 (8%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQR 70 +F +F G +++ + + +E + +Y++ + G G++HL+ A + + Sbjct: 162 NPKYSFDNFVVGKSNNFAFKISKKIAEEKKVTTNPLYIFGKSGIGKTHLIQAIGNHILKN 221 Query: 71 ---GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV D + + + + L+ +D+I+ +AG +M F Sbjct: 222 THSSKKVLYVKADGFIEEFTNQLRKAKMEDFNEKYRDIDLLLVDDIQIMAGATRTQMEFF 281 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L++ + + K +++IT D+ +L + L SR + G + +Q +L L+ + Sbjct: 282 KLFDYLYLNQK-QIVITSDKQASELKNIMSRLTSRFEAGLMVDIQSPDFNHRLNILKKKI 340 Query: 179 R----LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++ +DV + +R + L +L + T + I E L+L Sbjct: 341 LEFEPQNTLKIKKDVLDLIASSFVNNVREMEGALLRLLNYAQTFGYDIDINIANEALEL 399 >UniRef50_UPI0000D52F8F chromosomal replication initiator protein DnaA n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F8F Length = 306 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 90/202 (44%), Gaps = 11/202 (5%) Query: 40 QEHSGYIYLWAREGAGRSHLLHAACAELSQRGDA-VGYVPLDKRTW---------FVPEV 89 + ++ G G++HL+ + ++ + ++ V YV +K + ++ Sbjct: 1 SNPFNPLMVYGGVGLGKTHLIQSIGNKIINKSNSSVYYVTSEKFANQFIDSLKENKLKDL 60 Query: 90 LDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD 149 ++ ++ + ID+I+ G + + F ++N++ + K ++++ D+ P +L+ Sbjct: 61 INFYVNIDCLIIDDIQFFKGKDKTQEVFFHIFNQLNLNNK-QIILAADKSPVELDGLEKR 119 Query: 150 LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLD 209 L SR G +L+ + +L L + + + +++ ++ ++D +R L L Sbjct: 120 LVSRFKSGLTVELEKPDYQTRLDILNYKIQNENLSINKEIVEYIAFQVDTNIRELEGVLV 179 Query: 210 QLDRASITAQRKLTIPFVKEIL 231 L S + ++I K I+ Sbjct: 180 SLLAHSTITKEDISIELTKSII 201 >UniRef50_B4U623 Chromosomal replication initiator protein dnaA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U623_HYDS0 Length = 444 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 + TF +F G + + + + + ++++ + G+G++HLL A Sbjct: 111 GISSKYTFDNFIVGKQNEVAYRASLEVATDENSIYNPLFIYGKVGSGKTHLLQAIGNRAY 170 Query: 69 QRGDAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 G +V Y ++ T + + + + ++ ID+I+ ++G E +M +F+ Sbjct: 171 SLGKSVIYTSMNDFTEEMVYYLKAGNIISFREKYKGVDILLIDDIQFLSGKERTQMELFN 230 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 ++N + + K ++ D+ PR + L SR + G + + + D+ KL ++ + + Sbjct: 231 IFNYLFQYNK-HIVFASDKHPRDIKDISERLVSRFEGGLLVE-TSIDDQIKLSIIKQKIQ 288 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 + G + E + ++ R + + Q+ Sbjct: 289 IYGLNVDERLISYIKDNTTNNAREIEGLVLQIKA 322 >UniRef50_A0LE53 Chromosomal replication initiator protein dnaA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=DNAA_SYNFM Length = 450 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 22/236 (9%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHSGY---IYLWAREGAGRSHLLHAACAELSQ 69 TF F G + A + Y +YL + G G+SHL HA L Sbjct: 109 FNPRFTFDHFVVGGCNQFAYAAAMGMANNQQLYNQSVYLLSDTGLGKSHLTHAVGNYLRN 168 Query: 70 RGD--AVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELWE 114 R V YV ++ F E++ +++ ++ ++ IE ++G E + Sbjct: 169 RKPELRVQYVTTEQ---FANEMIFSLKNGNMEAFKNKFRTGCDVLLLEKIEFLSGKEKIQ 225 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 + + +++ GKT +L TG+ P+ + +L SRL G + + + +++ + Sbjct: 226 KELVYTLDELMDRGKT-VLCTGNAYPKDIPKLNSELQSRLGGGLLAPIDKPDFKTRIEII 284 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + ++ +P +V +L R+ ++R L L L S + +T+ +E+ Sbjct: 285 KRKSHTENIRVPMEVVEYLADRITGDVRQLESCLVGLMAKSNILRTPITLDLAREV 340 >UniRef50_Q0ADW8 Regulatory inactivation of DnaA Hda protein n=2 Tax=Nitrosomonas RepID=Q0ADW8_NITEC Length = 221 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 122/227 (53%), Gaps = 9/227 (3%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQN-VLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L + + +F P N LL L+N V + YLW G+G+SHLL A Sbjct: 3 QLLLDITEIGPPSLDNFIPEGNEELLYTLRNLVADNRQDRFYYLWGNTGSGKSHLLQAVT 62 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 ++ Y+ ++ + +D + +DNIE + D+ ++ +F+LYN+I Sbjct: 63 NIFMEQQRNTHYIDCNQA-----DEIDFNLTADCIAVDNIEQL--DDAEQIRLFNLYNQI 115 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 ES L G RPP QL L PDL +RL WG +Y++ L+DE K++ +Q A GFE Sbjct: 116 RESKYGIFLAGGTRPPAQLGLR-PDLTTRLGWGLVYQVHELTDEKKIEVMQDYAIRCGFE 174 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LP DV +LLK R++ +L + LD+ S+T QR +T+P ++E+L Sbjct: 175 LPLDVCNYLLKHEQRDLSSLIRQVSALDQLSLTRQRPVTLPLLRELL 221 >UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHM2_9RHIZ Length = 506 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 24/243 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ------EHSGYIYLWAREGAGRSHLLHAACA 65 L TF SF G ++ + A + + +Y+ + G G+SHLL A Sbjct: 162 PLDPRYTFDSFVVGASNRMAHAGATQVAETVLTDAPGYNPLYIHSAVGLGKSHLLQAIAW 221 Query: 66 ELSQRGDA--VGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWE 114 E+ +R + V Y+ ++ + E + ++ ++ ID++E + G E E Sbjct: 222 EVKRRAPSAQVLYLTAERFRYQFVEALRSSDPLAFKERFRNIHMLLIDDLEFLQG-ERTE 280 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 + N +L+ GK ++++ R P Q+ + SRL G + +L PL E +L+ L Sbjct: 281 QEFDHIINALLDGGK-QVVVASARAPNQIERLNERMRSRLQRGLVTELIPLDHELRLKVL 339 Query: 175 -----QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 + RA F L DV L RL R L + +L + +T+ + Sbjct: 340 EKRLGEKRAADPSFTLSRDVVDLLAMRLTENGRELEGAITRLYATWQYMRTPITLDIAET 399 Query: 230 ILK 232 +++ Sbjct: 400 VIR 402 >UniRef50_B8GWW5 Chromosomal replication initiator protein dnaA n=8 Tax=Caulobacteraceae RepID=DNAA_CAUCN Length = 490 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 21/241 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELS 68 L + TF +F PG + A+ + G + G G++HLL+A E Sbjct: 148 GLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHLLNALAWEAM 207 Query: 69 QRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ ++ + + L+ ID++ IAG + + + Sbjct: 208 RNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIAGKQSTQEEL 267 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++ G R++ + DRPP + L S L G + L+P +L L+ + Sbjct: 268 FHTLTALVGEGG-RVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNLRLGILERK 326 Query: 178 ARLRGF------ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + G + +V +FL R +R L L+ L + ++T+ V+ IL Sbjct: 327 IQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMTLDEVQAIL 386 Query: 232 K 232 + Sbjct: 387 R 387 >UniRef50_B7CCH8 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCH8_9FIRM Length = 452 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 100/246 (40%), Gaps = 24/246 (9%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIY----LWAREGAGRSHLLHAAC 64 L TF +F G++++ A + + +++ L+ G G++HLLHA Sbjct: 103 LENKFNPSYTFENFVEGNSNAEAYAACLACCTQTTSHLFNPLMLYGNSGLGKTHLLHAMG 162 Query: 65 AELSQRGD--AVGYVPLDKRTWFVPE--------------VLDGMEHLSLVCIDNIECIA 108 L++ V Y+ + E V + + ID+I+ + Sbjct: 163 NYLAKEHPECKVIYMYSGDLVSLLIEAMKTKNVHGNTVERVKEQLLDCDYFLIDDIQNLQ 222 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 + F +YN++++ T+++IT D P +++ L SR G + E Sbjct: 223 QHSSSQEIFFTVYNQLIQKN-TQIIITSDMHPSEISGLQSRLISRFVSGLTISISKPEFE 281 Query: 169 DKLQALQLRARLR--GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS-ITAQRKLTIP 225 L+ + R G + EDV +L + ++R L TL++L + + + + Sbjct: 282 TSKAILKKKIEGREEGVNMSEDVIDYLAGKYSNDVRNLEGTLNRLIFNATLFNPDVIDMD 341 Query: 226 FVKEIL 231 F +++L Sbjct: 342 FARKVL 347 >UniRef50_B7IF65 Chromosomal replication initiator protein dnaA n=2 Tax=Thermotogaceae RepID=DNAA_THEAB Length = 438 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 98/234 (41%), Gaps = 17/234 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G+ + + ++ I+L++ G G++HL A L + Sbjct: 99 PLNPKYTFENFVVGNFNRFAYNVFLEASKKPGYYNPIFLYSGVGLGKTHLAQALGNFLLE 158 Query: 70 RGD--AVGYVPLDKRTW---------FVPEVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 V Y+ + E + ++ ID+I+ + G + ++ + Sbjct: 159 NDPDLKVAYLTSEDFMNEMFYAIKNGTTEEFREKYRKKADILIIDDIQFLIGIKSAQVEL 218 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N I E+GK +++I DR P++L + SR G + K++ + ED + + Sbjct: 219 FHTFNAIHEAGK-QIIICSDRTPQELKDFHSRMISRFQMGLLVKIENPTKEDLFKIGKKI 277 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ++L+G E+ +++ ++ + R + + +L L + + IL Sbjct: 278 SKLKGVEINDEIIDYI-SSIYDNPRLIHGAILKLIAYKNLYGS-LNLSIAQSIL 329 >UniRef50_A8RAI5 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAI5_9FIRM Length = 459 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAELS 68 + + TF SF G N+ A + + ++++ G G++HLLHA + Sbjct: 119 KINPEYTFDSFVVGKNNREAHAASLSACYYPGKFNNPLFIFGNSGLGKTHLLHAIGNYIK 178 Query: 69 QR--GDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + D V Y+ + V EV + + + ID+I+ + + Sbjct: 179 ENRPEDKVLYIYSEDFVTLLIEAMKNKNVEEVKEKICSADYLLIDDIQRL-KQSTSQELF 237 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F++YN+++ K +++IT D P +L L SR G + E LQ + Sbjct: 238 FNMYNKLIRDNK-QIVITSDIHPTELKGIENRLISRFSSGLSVSVGSPEFETAKAILQKK 296 Query: 178 ARLRG--FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ-RKLTIPFVKEILK 232 R + ++V +L R ++R L L++L SI + + F KEI K Sbjct: 297 IEGRNEEILIEDEVLDYLATRFASDVRKLEGALNELFFKSILYNPDTIDLKFAKEIFK 354 >UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 Tax=Desulfuromonadales RepID=Q39XN5_GEOMG Length = 243 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 14/241 (5%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR--QEHSGYIYLWAREGAGRSHLLHAA 63 QL + + +F + L + +YL G+G++HLL A Sbjct: 2 QLVFDFPVNPKYSLDNFVICSGNETAYRFVRRLTDDEGAENLLYLHGPSGSGKTHLLMAI 61 Query: 64 CAELSQRG--DAVGYVP---------LDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 A S R +V + + V ++ + + + +D++ I + Sbjct: 62 GAHFSARAGLSSVPCISFKDVDEVYGGEYPAEAVSKLAERFRNAPALLVDDLHLIPDQQA 121 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + ++ L+N ++G+ + ITG PP++L L SRL WG + ++ D+ + Sbjct: 122 VRVELWQLFNDFYQAGRP-IAITGLYPPKELPTIDDHLISRLLWGLVARVDISDDDSRRL 180 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ A R LP DV +LL + R++ +L LD + R ++ A+RK+++ +E L Sbjct: 181 IMKKLADDRQIVLPADVIDYLLLHVRRDVPSLIEALDAISRYALAAKRKVSVRLAREALA 240 Query: 233 L 233 Sbjct: 241 F 241 >UniRef50_Q6MEG8 Chromosomal replication initiator protein dnaA 2 n=14 Tax=Chlamydiales RepID=DNAA2_PARUW Length = 448 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 98/241 (40%), Gaps = 23/241 (9%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAACAE 66 + L ++ F +F G + + + + + +++ G G++H+LH+ Sbjct: 110 DVKLNNNYRFENFIEGPTNQFVKSAAMGVALRPGQSYNPLFIHGGVGLGKTHILHSIGHY 169 Query: 67 LSQRGD--AVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDE 111 + + V + + F+ +++D + + + ++ +D+I+ + Sbjct: 170 IKENHKKLRVQCITTEA---FINDLVDSLRNKSVDRMKKFYRSEIDVLLVDDIQFLQNRL 226 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 +E + + + G +++IT D+PP L L +++ G + + E ++ Sbjct: 227 NFEEELSYTFEALKNKG-AQIVITSDKPPSLLKLS-ERTIGKMEGGLVAHMGIPELETRV 284 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ +A +G +P V F+ + + +R L +++L +T V L Sbjct: 285 AILQYKAEQKGLHIPHKVAFFIAEHIHNNVRQLEGAINRLSAHCRLLDLNITEELVSRTL 344 Query: 232 K 232 + Sbjct: 345 R 345 >UniRef50_C4KUE4 DnaA regulatory inactivator Hda n=66 Tax=Betaproteobacteria RepID=C4KUE4_BURPS Length = 341 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 14/236 (5%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI-----YLWAREGAG 55 + QL+L L P TF +F+ G N+ L+ L+ + +G + Y+W G+G Sbjct: 101 VTVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSG 160 Query: 56 RSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 RSHLL A + + YV + L +SL +D+ + + ++ ++ Sbjct: 161 RSHLLQALVHDTTYGH--ARYVSPQGGL----DALAFDPRVSLYAVDDCDAL--NDAQQI 212 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 A+F+L+N + T L++ G P L++ DL +RL WG ++ L PL+DE K L+ Sbjct: 213 ALFNLFNEVRAHPMTALVVAGPAAPLALDVR-EDLRTRLGWGLVFHLAPLTDEGKAAVLK 271 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A+ RG L +DV +LL R+M +L LD LDR S+ +R +T+P ++ +L Sbjct: 272 HAAKERGIALADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAML 327 >UniRef50_A4GJ90 Putative DNA replication factor n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJ90_9BACT Length = 234 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 1/234 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNS-SLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN P QL P + +F SF+ ++ L++ L ++ E++ + + EG+G+S L Sbjct: 1 MNNPTQLIFPFQVNQKASFDSFFCSPDNIELMSRLTDLASSENTDELIINGAEGSGKSFL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + A C ELS G ++P++K E+ + L VCID+++ I E WE A+F+ Sbjct: 61 MQAICNELSSSGKQFAFIPMNKAINMGVEIFQNLASLDAVCIDDLQLILSKEEWETALFN 120 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L N+ +S + +L G + + LPDL SR+ + KLQ + DE QAL ++ Sbjct: 121 LINQCQQSYCSLILSFGGNQSLEDSTQLPDLLSRIKRMEFMKLQAVLDESLNQALGFVSQ 180 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 + + FLL RE L L LD+ + + +RK+TIP +KE L + Sbjct: 181 QLDINIEKAEIEFLLNHQTREFSILVDNLISLDKQAASLKRKITIPLIKETLNI 234 >UniRef50_C5V5E1 DnaA regulatory inactivator Hda n=2 Tax=Betaproteobacteria RepID=C5V5E1_9PROT Length = 222 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 120/229 (52%), Gaps = 16/229 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH-SGYIYLWAREGAGRSHLLHAAC 64 QL L + TF +F G N+ LL+ L L E +Y+W +G+G+SHLL A Sbjct: 3 QLLLDITPDWWPTFDNFVAGGNAELLSVLHQALSGESTDRCVYVWGADGSGKSHLLQACV 62 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 Y +VPE +V +D+ + + DE ++ +F+LYN + Sbjct: 63 GVAQNAHLNAIY-----AQGYVPE------PAEVVAVDDADTL--DEAGQIELFNLYNWM 109 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 +SG LL++G P LN+ DL +RL WG +Y++Q LSDE+K AL A+ RGF Sbjct: 110 RDSGGM-LLVSGLSSPLHLNVR-ADLRTRLGWGLVYQVQGLSDEEKALALVGHAQGRGFA 167 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 L +V ++LL+ R++ +L LD LD S+ R +IP +KE+++ Sbjct: 168 LAPEVVQYLLRHGRRDLPSLLTVLDALDEHSLRLHRAPSIPLLKEVMQF 216 >UniRef50_A7IB67 Chromosomal replication initiator protein dnaA n=29 Tax=Alphaproteobacteria RepID=DNAA_XANP2 Length = 506 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 22/241 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSG------YIYLWAREGAGRSHLLHAACA 65 L TF +F G ++SL A + + G +YL A G G++HLL A Sbjct: 163 PLDARLTFETFVVGKSNSLAFAAAKQVAESAPGSAPVFNPLYLHAAVGLGKTHLLQAIAR 222 Query: 66 ELSQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + G Y+ ++ T D + + + ID+++ + G+ L + Sbjct: 223 AGAVGGRRTTYLTAERFMYGFVAALKTHSAIAFKDALRTIDTLVIDDLQFLKGNNL-QQE 281 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 N +L+ G+ ++++ D P +L + SRL G + +L L ++ +L+ L+ Sbjct: 282 FCHTLNALLDGGR-QVVVAADCLPGELEHLDERVRSRLAGGLVVELAALEEDLRLEILKA 340 Query: 177 RARLR-----GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R + GF +P V FL + + + R L L++L + +T+ + + Sbjct: 341 RYQTLTEQHPGFAVPAPVLEFLARSVGQSGRDLDGALNKLLAFNQLTGEPVTLEMAENAV 400 Query: 232 K 232 K Sbjct: 401 K 401 >UniRef50_P34028 Chromosomal replication initiator protein dnaA n=9 Tax=Spiroplasma RepID=DNAA_SPICI Length = 450 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 100/240 (41%), Gaps = 23/240 (9%) Query: 15 DDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAA---CAELS 68 ++ TF +F GD++ + + ++++ G G++HLLHA E+ Sbjct: 108 ENYTFENFVRGDSNHEAMQAALAVALDLGKKWNPLFIYGDSGLGKTHLLHAIENKVNEIY 167 Query: 69 QRGDAVGYVPLDKRTWFVPEVLD-----------GMEHLSLVCIDNIECIAGDELWEMAI 117 + + V Y+ D+ ++L+ + + ID+I+ +A Sbjct: 168 KTNNRVKYLKADEFGKIAMDILNQGHEIIEAFKTSYDIYDCLLIDDIQLLAKRNKTNELF 227 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++N +E K +++IT D+ P L + SR +G L E L+ L+ + Sbjct: 228 FHIFNSYIEKNK-QIVITSDKYPDDLGGFEARIISRFSYGLSIGLDSPDFETALKILEQK 286 Query: 178 AR-LRGFEL-PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK---LTIPFVKEILK 232 + L E+ F+ + ++R L + +L ++ ++ +T+ V++ K Sbjct: 287 LKHQNNLGLFSEESLEFIALNFNSDVRKLEGAIKRLLFLAVMNKKPNEIITLADVEKAFK 346 >UniRef50_A8UU23 Chromosomal replication initiator protein dnaA n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU23_9AQUI Length = 407 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 93/212 (43%), Gaps = 14/212 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L +F +F G+ + L + + ++++ G G++HLL A Sbjct: 87 GLNVKYSFNNFVVGEGNRLAYEVALEVANSPGSLYNPLFIYGGVGLGKTHLLQAIGNFCV 146 Query: 69 QRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 ++G V Y + T V E + + L+ +D+I+ ++G ++ F+ Sbjct: 147 EKGYHVVYKSANDFSEEMVEAIKTGSVKEFRNRYRSIDLLLLDDIQFLSGKTRTQVEFFN 206 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 ++N + + ++++ DR P++L L SR + G + ++ L + KL+ ++ + Sbjct: 207 IFNHMF-LKEKQIVLASDRHPKELKDVSDRLVSRFEGGLVVEIC-LDELTKLEIIKRKLC 264 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211 E+ + + L+++ +R + T+ L Sbjct: 265 ELKIEVQDRIVESLMEQTSNNVRDIEGTIRGL 296 >UniRef50_A6LIY2 Chromosomal replication initiator protein dnaA n=1 Tax=Thermosipho melanesiensis BI429 RepID=DNAA_THEM4 Length = 437 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 101/237 (42%), Gaps = 23/237 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF + G+ + + + I+L++ G G++HL A L + Sbjct: 98 PLNPKYTFENLVVGEFNKFAYNVFLEASKNPGFYNPIFLYSGVGLGKTHLAQALGNYLLE 157 Query: 70 RGD--AVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIECIAGDELWE 114 V Y+ ++ F+ E+ +++ ++ ID+I+ + G + + Sbjct: 158 TDPDMKVAYLTSEE---FMNEMFSAIKNGNIDEFREKYRKKADILIIDDIQFLIGIKSAQ 214 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 +F +N I E+GK +++I DR P++L + SR G + K++ S ED + Sbjct: 215 TELFHTFNTIHEAGK-QIIICSDRTPQELKDFHSRMISRFQMGLLVKIEKPSSEDLFKIG 273 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + + ++ E+ +++ +++ ++ R + + +L L + + IL Sbjct: 274 KKISEMKNVEIDDEIIKYI-SKIYDNPRLIHGAILRLIAYRNLYGT-LNLSIAESIL 328 >UniRef50_B8FFL8 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=DNAA_DESAA Length = 454 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 33/258 (12%) Query: 3 TPAQLSLPLY-----------LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYL 48 P QL LP + L D TF SF GD + + + + S +YL Sbjct: 96 APQQLCLPAFADIPRPSSGRLLNRDFTFDSFVVGDCNDFAYSAALSVASKRSKLHAPLYL 155 Query: 49 WAREGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWFVPEVLDGM------------- 93 A+ G G+SHL A ++ Q V Y+ + F E++ + Sbjct: 156 LAQTGLGKSHLSQAVGRQVMQESPEERVFYITAE---DFTNEMIGALNTGTISSFKEKYR 212 Query: 94 EHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + + ++++ ++G + + + ++E+ K RL+ T P ++ + SR Sbjct: 213 RNCDTLILEDVHFLSGKNRTQDELAFTLDSLMETNK-RLVFTSAYLPSEIPKMHDSMRSR 271 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 L+ G I L+ +++ LQ +A LP DV F+ L ++R L + L Sbjct: 272 LNAGVISSLEAPDFRMRMRILQRKANSAKIALPMDVAEFMASELTGDIRHLESGIKGLAA 331 Query: 214 ASITAQRKLTIPFVKEIL 231 + R + + +E++ Sbjct: 332 RNSIMGRGIDLKMAREVV 349 >UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n=2 Tax=Labrenzia RepID=A0NR08_9RHOB Length = 491 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 19/236 (8%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G ++SL A + H G +Y+ + G G++HLL AA +E + Sbjct: 153 LNPKLTFDTFAEGASNSLACAAVRQMAAGHQGTLDMLYIHSATGIGKTHLLQAAASEARK 212 Query: 70 RGDAVGYVPLD---------KRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 G V Y+ + RT P + M + L+ +D+++ + G + E F Sbjct: 213 TGRQVAYLSAEFFMYHLVPALRTPAFPILRQAMRSIDLLLVDDLQFLHGKQAAEE--FSK 270 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR--A 178 +L +++++ DRP L+ L R+ G++ +Q + L+ R A Sbjct: 271 TLELLMESPSQIIMAADRPAEDLDTLGDALRFRIQKGEVVGIQATDYALRHDILKKRINA 330 Query: 179 RLR---GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R GF +PEDV ++ + + R L L++L + ++ +T+ ++ L Sbjct: 331 ARRTHPGFSVPEDVADYIARYVIASARDLEGALNRLFAHNQLTKQPVTMDLAEKTL 386 >UniRef50_A9LYZ8 DnaA-related protein n=28 Tax=Neisseriaceae RepID=A9LYZ8_NEIM0 Length = 243 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 12/231 (5%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 T QL D +F F +N+ L+ VLR +H +IY+W EGAG+SHLL Sbjct: 20 RTVNQLIFDFAAHDYPSFDKFLGTENAELVY----VLRHKHGQFIYVWGEEGAGKSHLLQ 75 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A A+ + G Y+ + +D +E + +E + +F ++ Sbjct: 76 AWVAQALEAGKNAAYIDAASMPLTDAAFEAEY-----LAVDQVEKLGNEE--QALLFSIF 128 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NR SGK LL+ + P+QL + DL +R+ + +Y+++PL+D++K+ AL A R Sbjct: 129 NRFRNSGKGFLLLGSEYTPQQL-VIREDLRTRMAYCLVYEVKPLTDQEKIDALASMAAAR 187 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++ +LLK R+M +L M LD LD ++T +++T+P ++++LK Sbjct: 188 QVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLK 238 >UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRP4_DESOH Length = 460 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 25/252 (9%) Query: 5 AQLSLPLY---------LPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWARE 52 AQL+LP L D TF +F G+++ L +Q ++L +R Sbjct: 106 AQLTLPSVQVKPATGRVLKADYTFDNFVVGNHNDFAYTAVLSLGARQQSGGRSLFLSSRP 165 Query: 53 GAGRSHLLHAACAEL--SQRGDAVGYVPLDKRTWFVP---------EVLDGMEH-LSLVC 100 G G+SHL A + +Q G V Y ++ + + ++ Sbjct: 166 GMGKSHLAQALGHQTIKAQPGCRVYYTTVEDFSNEMVYAYTTKSSGAFKKKYRTGFDMLL 225 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ID+I +AG + + + + + +LE+ + ++L G P ++ L SRL G I Sbjct: 226 IDDIHALAGKDRTQEELAMVVDYMLEADR-KVLFAGCCLPGEIPKMNDQLKSRLSCGLIT 284 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR 220 ++ +++ L+ +AR G+ +P D+ +L L ++R L L L S Sbjct: 285 TMETPDFTTRVRILEKKARFYGYAVPRDILEYLADVLTEDVRQLESGLANLATKSCLLGV 344 Query: 221 KLTIPFVKEILK 232 + + I+K Sbjct: 345 PMDRELAESIIK 356 >UniRef50_D2MMX3 Chromosomal replication initiator protein DnaA n=1 Tax=Bulleidia extructa W1219 RepID=D2MMX3_9FIRM Length = 453 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 85/222 (38%), Gaps = 15/222 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 + D TF +F GD + A + ++++ G G++HLL A + Sbjct: 113 TIQKDRTFENFVIGDCNRESQAAAYAVSLNPGQLWNPLFIYGNSGLGKTHLLMAIANYIK 172 Query: 69 QRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y K T + M L ++ ID+I+ IAG E Sbjct: 173 KHQPEKKVYYTESTKFVETVVHALQTGTIDAFKRYMYSLDVLLIDDIQFIAGKEKSHEIF 232 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +Y ++ + + ++ IT DR P+ + LASR G + E L + Sbjct: 233 FTIYEEMV-NNRKQVCITSDREPKDIKDLEDRLASRFLNGLTVGIDSPEFETARAILNQK 291 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 ++ + E+ ++ +R L L+++ +I Q Sbjct: 292 IKVNDNSIDEEGMNYIASNFAGNVRELEGALNRVLFYAIQFQ 333 >UniRef50_A6T215 Uncharacterized conserved protein n=6 Tax=Betaproteobacteria RepID=A6T215_JANMA Length = 223 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 17/231 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLH 61 QL L L +T SF G N+ L LQ + + +G ++YLW GAG++HLL Sbjct: 3 QLLLDLPAEKPQTLDSFVVGTNAELAQLLQRLAAGQPNGLDERFVYLWGEAGAGKTHLLR 62 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A Y+ D T +L +D+ + ++A F L+ Sbjct: 63 AMA-----ETPHARYLDSDAGTDDFLY----DSATTLYLLDDSHKLT--PDAQIAAFALF 111 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N++ E G LL G+ P L + DL +R WG IY++ LSD++K+ AL A R Sbjct: 112 NQVREQGGC-LLAAGNAAPASLTVR-EDLRTRFGWGLIYQVHGLSDDEKIAALTHAAGAR 169 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G L V +L+ R+MR+L LD LD+ S+ +R +T+P ++E+L+ Sbjct: 170 GLTLSPGVLPYLITHFARDMRSLSAMLDALDQYSLETKRPITLPLLRELLQ 220 >UniRef50_A1WIR8 Chromosomal replication initiator, DnaA n=19 Tax=cellular organisms RepID=A1WIR8_VEREI Length = 307 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 17/236 (7%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNV------LRQEHSGYIYLWAREGAGRSHL 59 QL L + L T F+ G N + L L+ YLW G+G++HL Sbjct: 78 QLVLDIGLATVPTLDRFFAGPNGAALQHLRLALGAGRHAATRSPVPSYLWGEPGSGKTHL 137 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L A C L ++G +VG++ D P+ E+ + V +D+++ + D + F+ Sbjct: 138 LQAVCQSLREQGASVGWL--DPALSAPPDF---DENWTAVVLDDVQ--SYDSARQALAFN 190 Query: 120 LY-NRILESGKTR--LLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 + N I + + +L G PP L L DL SRL WG +++LQ L + ++ L+ Sbjct: 191 WFVNAISPASGAQRWVLAAGSLPPADLPLR-EDLRSRLGWGHVFQLQLLGEAERRSVLRQ 249 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A RG L ++V ++L+R R++ +L L++LD +++ +R +TIP +K +L+ Sbjct: 250 EADARGVFLGDEVMDYMLRRFARDLGSLMQLLERLDAFALSTRRAITIPLLKTMLE 305 >UniRef50_C6WT64 DnaA regulatory inactivator Hda n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT64_METML Length = 218 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 127/232 (54%), Gaps = 29/232 (12%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR-QEHSGYIYLWAREGAGRSHLL 60 + QL L + + +F G N+ L +L+ L E + +IYLW +G+G+SHLL Sbjct: 10 SPTKQLLLDIQPLPPPSLDNFIEGQNAEALFSLKQALTHAEEARFIYLWGAQGSGKSHLL 69 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A C ++++ +L L D+ + DE ++A+FD Sbjct: 70 QA-CERMARQS-----------------------NLPLFIADDTHTL--DEAAQIALFDQ 103 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N++ SG L+ +G P Q+NL DLA+RL WG +Y+L PL+DE+K QAL+ A Sbjct: 104 FNQLRSSGGI-LISSGIAAPMQMNLR-DDLATRLAWGLVYQLHPLTDEEKAQALRTHATE 161 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 RG +LP++V + L+ L R++ TL LD LD S+T ++ +T+P +K++L+ Sbjct: 162 RGMKLPDEVVEYCLRYLRRDLPTLMAVLDALDVWSLTEKKPVTVPMLKKLLQ 213 >UniRef50_B8KQC7 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KQC7_9GAMM Length = 237 Score = 195 bits (497), Expect = 9e-49, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 10/235 (4%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLL-AALQNVLRQEHSGYIYLWAREGAGRSHL 59 +T QL L + L + TF +F S L L++ YL+ G+G+SHL Sbjct: 6 FSTAGQLPLAIALDAEATFDNFAADTTSELAVDWLKDNHESAGG---YLFGGAGSGKSHL 62 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L A+CA + Y+PL + + +VLDG++ LSLV +D+I+ IAGD WE A+F Sbjct: 63 LQASCAATTA---PALYIPLAEFADYPAAQVLDGIDALSLVALDDIDRIAGDSSWEEALF 119 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + SG TRLL++ Q++ L DL SRL ++L D+ + L LRA Sbjct: 120 HAFNLCVGSG-TRLLVSASSTASQIDFTLADLQSRLGSLAAFRLPRPDDDSLERMLDLRA 178 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG L +V R+++ R R+ + L++LD A++ R +TIP +KE LKL Sbjct: 179 GHRGITLSAEVKRYIVTRAPRDSHAVMALLEKLDTAALARHRLVTIPLIKE-LKL 232 >UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n=5 Tax=Leptospira RepID=DNAA_LEPBJ Length = 437 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 24/242 (9%) Query: 10 PLYLPDDETFASFWPGDNSSLLA-ALQNVLRQEHS-GYIYLWAREGAGRSHLLHAACAEL 67 D TF +F GD + L A + +R+ +YL+ G G++HLLHA +EL Sbjct: 97 DFQFNPDYTFETFIVGDCNRLAYTAAKECVRKPAEINPLYLFGSVGVGKTHLLHAIGSEL 156 Query: 68 SQRGD--AVGYVPLDKRT----------WFVPEVLDGMEHLSLVCIDNIECIA-GDELWE 114 ++ V Y+ + + + + + +D+I+ ++ E + Sbjct: 157 IKKDPWKTVCYIDISSFMNEFRFALQSRELIESFKIKYQSYNCLLVDDIQLLSTNAEKTQ 216 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F L+N + E K +++I DRP +L + L SR G +Q + E + + Sbjct: 217 DEFFALFNFLFER-KRQIVIASDRPSSELTI-HERLKSRFVTGVQADIQYPNKEIRKGIV 274 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL----DRASITAQRKLTIPFVKEI 230 +++ L EDV FL +++ + R L L+ + S+ L + VKEI Sbjct: 275 TSHSKIMDLGLSEDVLEFLADQIEEDTRLLLGALNDIYLYKKSYSLLF---LNLDKVKEI 331 Query: 231 LK 232 +K Sbjct: 332 VK 333 >UniRef50_A6C0G2 Chromosomal replication initiator protein dnaA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0G2_9PLAN Length = 505 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 97/244 (39%), Gaps = 16/244 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 + P Q P ++F G ++ L ++ +++ G G++H Sbjct: 150 HKPTQ-PAPYKGRRFADLSTFITGKSNQLAYMATQQASEQPGALYNPLFIHGGVGLGKTH 208 Query: 59 LLHAACAELSQRGDA--VGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECI 107 LL ++ Q+ + V ++ + + +P ++ ++ ID+I+ Sbjct: 209 LLEGFYRKIRQQYPSLQVVFLTAESFGNYFSKALQERSLPGFRQRFRNVDVLIIDDIDFF 268 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 ++ + + ES +L+ + DR PR L +L +R G + +++ Sbjct: 269 ESKHNFQEELLHTIKHL-ESHGRQLIFSSDRHPRLLTKMSEELTTRFLSGLVCRVESPET 327 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E +LQ + RA + + ++ +R +R L ++ L + ++K+T Sbjct: 328 ELRLQIARQRALQLKTPITDGALEYVARRFSHNVRELEGAMNCLQTWHVMTKQKITTTMA 387 Query: 228 KEIL 231 +++L Sbjct: 388 RQVL 391 >UniRef50_B2S1V1 Chromosomal replication initiator protein dnaA n=2 Tax=Treponema pallidum RepID=DNAA_TREPS Length = 464 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 29/254 (11%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHL 59 P++ S L D TF +F G+ + + + + + ++ G G++HL Sbjct: 109 VPSKKSFHPDLNRDYTFENFVSGEETKFSHSAAISVSKNPGTSYNPLLIYGGVGLGKTHL 168 Query: 60 LHAACAELSQRGD-AVGYVPLDKRTWFVPEVLDGMEH-------------LSLVCIDNIE 105 + A E+ + D V YV + F E + + + ++ ID+I Sbjct: 169 MQAIGHEIYKTTDLNVIYVTAE---NFGNEFISTLLNKKTQDFKKKYRYTADVLLIDDIH 225 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + + +F +N + E K +++ T DRP ++L L SR G L Sbjct: 226 FFENKDGLQEELFYTFNELFE-KKKQIIFTCDRPVQELKNLSSRLRSRCSRGLSTDLNMP 284 Query: 166 SDEDKLQALQLRARLRG-------FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 E + L + + + +DV R + + + +R L L ++ + Sbjct: 285 CFETRCAILIKKIQNYNSTYPHKAIHISDDVVRLVSENISSNIRDLEGALTKIIAFIEVS 344 Query: 219 QRKLTIPFVKEILK 232 +TI V +LK Sbjct: 345 GS-ITIDIVPSLLK 357 >UniRef50_Q3BQY1 Replication related protein n=20 Tax=Xanthomonadaceae RepID=Q3BQY1_XANC5 Length = 235 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 3/231 (1%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 M+ P QL L L P D+ F S+ + L Q + S ++YL G G++HL Sbjct: 1 MSVP-QLPLALRAPPDQRFDSYIAAPDGLLAQL-QALAAGHVSDWLYLSGPAGTGKTHLA 58 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + CA Q G Y+PL + + L+ +E LV +D +E IAG E+A+FD Sbjct: 59 LSLCAAAEQAGRTPAYLPLQAAAGRLRDALEALEGRGLVALDGVESIAGRRDDEVALFDF 118 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR +G LL T + P L L LPDL SRL L L D + L+ RA+ Sbjct: 119 HNRARAAG-ITLLYTARQMPDGLALVLPDLRSRLSQCIRIGLPVLDDAARGAVLRDRAQR 177 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L E +LL +RE+ L LD+LDR S+ A+R++T+PF++ ++ Sbjct: 178 RGLALDEAAIDWLLTHSERELAGLVALLDRLDRESLAAKRRITVPFLRRVV 228 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n... 296 3e-79 UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n... 293 3e-78 UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n... 292 8e-78 UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n... 285 6e-76 UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n... 285 6e-76 UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n... 284 2e-75 UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (... 281 8e-75 UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n... 281 9e-75 UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n... 281 1e-74 UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n... 280 2e-74 UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n... 280 3e-74 UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n... 278 8e-74 UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n... 278 8e-74 UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n... 277 2e-73 UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n... 275 7e-73 UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n... 273 3e-72 UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n... 272 6e-72 UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n... 272 8e-72 UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n... 270 2e-71 UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n... 270 4e-71 UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n... 269 6e-71 UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n... 269 6e-71 UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n... 268 8e-71 UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n... 268 1e-70 UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n... 268 1e-70 UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n... 267 2e-70 UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n... 267 3e-70 UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n... 266 4e-70 UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n... 266 4e-70 UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n... 266 5e-70 UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n... 265 6e-70 UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n... 265 9e-70 UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n... 265 9e-70 UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n... 265 1e-69 UniRef50_C4FYD8 Chromosomal replication initiator protein dnaA n... 264 2e-69 UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n... 264 2e-69 UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n... 263 2e-69 UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n... 263 3e-69 UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=... 263 5e-69 UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n... 262 5e-69 UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n... 262 7e-69 UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n... 262 8e-69 UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n... 261 9e-69 UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n... 261 2e-68 UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n... 261 2e-68 UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n... 260 3e-68 UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n... 260 4e-68 UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n... 259 6e-68 UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n... 259 7e-68 UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n... 258 9e-68 UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_C7M114 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n... 258 1e-67 UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n... 257 2e-67 UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n... 257 2e-67 UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n... 257 2e-67 UniRef50_A8YW41 Chromosomal replication initiator protein dnaA n... 256 3e-67 UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n... 256 4e-67 UniRef50_Q83NZ5 Chromosomal replication initiator protein dnaA n... 256 4e-67 UniRef50_A7BAR9 Chromosomal replication initiator protein dnaA n... 256 6e-67 UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n... 255 7e-67 UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n... 255 7e-67 UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n... 255 7e-67 UniRef50_D2RCN9 Chromosomal replication initiator protein DnaA n... 255 8e-67 UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n... 255 9e-67 UniRef50_D2RMT3 Chromosomal replication initiator protein DnaA n... 255 9e-67 UniRef50_C7H083 Chromosomal replication initiator protein dnaA n... 255 1e-66 UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n... 254 2e-66 UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n... 254 2e-66 UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n... 254 2e-66 UniRef50_UPI0001C36FC2 chromosomal replication initiation protei... 253 3e-66 UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n... 253 4e-66 UniRef50_Q1GC43 Chromosomal replication initiator protein dnaA n... 253 5e-66 UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n... 252 6e-66 UniRef50_UPI0001BCD63C chromosomal replication initiation protei... 252 6e-66 UniRef50_UPI000185BFFA chromosomal replication initiator protein... 252 8e-66 UniRef50_B8DV06 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_B0S416 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_B2V628 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein... 251 1e-65 UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n... 251 1e-65 UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n... 251 2e-65 UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n... 250 2e-65 UniRef50_Q03D55 Chromosomal replication initiator protein dnaA n... 250 3e-65 UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n... 249 6e-65 UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n... 249 6e-65 UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n... 249 6e-65 UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultur... 249 7e-65 UniRef50_O87546 Chromosomal replication initiator protein dnaA n... 249 7e-65 UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n... 249 7e-65 UniRef50_A3EQC2 Chromosomal replication initiator protein dnaA n... 247 2e-64 UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n... 247 3e-64 UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n... 246 3e-64 UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n... 246 3e-64 UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n... 246 3e-64 UniRef50_C5NVU9 Chromosomal replication initiator protein dnaA n... 246 3e-64 UniRef50_A7H675 Chromosomal replication initiator protein dnaA n... 246 4e-64 UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n... 246 5e-64 UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n... 246 5e-64 UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n... 245 8e-64 UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n... 245 1e-63 UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n... 244 2e-63 UniRef50_Q1PVD7 Chromosomal replication initiator protein dnaA n... 243 3e-63 UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n... 243 4e-63 UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n... 242 6e-63 UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n... 242 6e-63 UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n... 242 7e-63 UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n... 242 7e-63 UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteoba... 242 7e-63 UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n... 242 9e-63 UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n... 241 9e-63 UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n... 241 1e-62 UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n... 241 2e-62 UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n... 240 2e-62 UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n... 240 3e-62 UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n... 240 3e-62 UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n... 240 4e-62 UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n... 239 5e-62 UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n... 239 6e-62 UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n... 239 7e-62 UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n... 238 9e-62 UniRef50_C4K7F6 Regulatory factor involved in inactivation of Dn... 237 3e-61 UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n... 236 3e-61 UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax... 236 4e-61 UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesa... 236 4e-61 UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n... 235 1e-60 UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n... 234 2e-60 UniRef50_B1MW29 Chromosomal replication initiator protein dnaA n... 233 4e-60 UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n... 232 6e-60 UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n... 232 7e-60 UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n... 232 8e-60 UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n... 231 1e-59 UniRef50_A8F346 Chromosomal replication initiator protein dnaA n... 231 1e-59 UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n... 231 1e-59 UniRef50_B7J203 Chromosomal replication initiator protein dnaA n... 231 2e-59 UniRef50_D1AIS7 Chromosomal replication initiator protein dnaA n... 230 2e-59 UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n... 230 3e-59 UniRef50_D1W4X4 Chromosomal replication initiator protein dnaA n... 230 3e-59 UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n... 230 3e-59 UniRef50_C8N934 Chromosomal replication initiator protein dnaA n... 230 3e-59 UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n... 229 4e-59 UniRef50_UPI0001C311AD chromosomal replication initiator protein... 229 5e-59 UniRef50_C5R9Y2 Chromosomal replication initiator protein dnaA n... 228 9e-59 UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n... 228 1e-58 UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n... 228 2e-58 UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n... 228 2e-58 UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n... 228 2e-58 UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n... 227 2e-58 UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n... 227 3e-58 UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n... 226 3e-58 UniRef50_B9Y5K6 Chromosomal replication initiator protein dnaA n... 226 5e-58 UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermane... 226 6e-58 UniRef50_B0N234 Chromosomal replication initiator protein dnaA n... 226 6e-58 UniRef50_Q1V1G7 Chromosomal replication initiator protein dnaA n... 226 6e-58 UniRef50_C2MAU1 Chromosomal replication initiator protein dnaA n... 224 1e-57 UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepI... 224 1e-57 UniRef50_C8P211 Chromosomal replication initiator protein dnaA n... 224 2e-57 UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n... 224 3e-57 UniRef50_C7MEK7 Chromosomal replication initiator protein dnaA n... 223 3e-57 UniRef50_C3JBQ8 Chromosomal replication initiator protein dnaA n... 223 5e-57 UniRef50_C9LP67 Chromosomal replication initiator protein dnaA n... 222 8e-57 UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n... 221 1e-56 UniRef50_B7IF65 Chromosomal replication initiator protein dnaA n... 221 2e-56 UniRef50_A9NE65 Chromosomal replication initiator protein dnaA n... 221 2e-56 UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n... 221 2e-56 UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria... 221 2e-56 UniRef50_D0GPF1 Chromosomal replication initiator protein dnaA n... 221 2e-56 UniRef50_Q2NKC5 Chromosomal replication initiator protein dnaA n... 220 3e-56 UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=... 219 7e-56 UniRef50_D1BQ77 Chromosomal replication initiator protein dnaA n... 219 7e-56 UniRef50_A6LIY2 Chromosomal replication initiator protein dnaA n... 218 1e-55 UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n... 218 2e-55 UniRef50_UPI0000D537C1 Chromosomal replication initiator protein... 216 3e-55 UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 ... 216 5e-55 UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 ... 216 6e-55 UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n... 215 1e-54 UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n... 214 2e-54 UniRef50_B4U623 Chromosomal replication initiator protein dnaA n... 214 2e-54 UniRef50_B7CCH8 Chromosomal replication initiator protein dnaA n... 214 3e-54 UniRef50_A8UU23 Chromosomal replication initiator protein dnaA n... 212 6e-54 UniRef50_O66659 Chromosomal replication initiator protein dnaA n... 212 6e-54 UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwell... 211 1e-53 UniRef50_B2UL60 Chromosomal replication initiator protein dnaA n... 211 2e-53 UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitroco... 211 2e-53 UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 ... 211 2e-53 UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine ... 211 2e-53 UniRef50_UPI0000D52F8F chromosomal replication initiator protein... 210 3e-53 UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 ... 210 4e-53 UniRef50_P34028 Chromosomal replication initiator protein dnaA n... 209 4e-53 UniRef50_A0LE53 Chromosomal replication initiator protein dnaA n... 208 1e-52 UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsul... 208 1e-52 UniRef50_A8RAI5 Chromosomal replication initiator protein dnaA n... 208 1e-52 UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n... 207 3e-52 UniRef50_B8GWW5 Chromosomal replication initiator protein dnaA n... 206 4e-52 UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis K... 206 7e-52 UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteu... 205 8e-52 UniRef50_A6C0G2 Chromosomal replication initiator protein dnaA n... 205 1e-51 UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 ... 205 1e-51 UniRef50_Q6MEG8 Chromosomal replication initiator protein dnaA 2... 204 1e-51 UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 ... 204 3e-51 UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reineke... 203 3e-51 UniRef50_UPI00016C3F50 initiation of chromosome replication n=1 ... 203 4e-51 UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n... 203 4e-51 UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 ... 201 1e-50 UniRef50_D2MMX3 Chromosomal replication initiator protein DnaA n... 201 1e-50 UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 ... 201 2e-50 UniRef50_B8DN19 Chromosomal replication initiator protein dnaA n... 201 2e-50 UniRef50_A7IB67 Chromosomal replication initiator protein dnaA n... 201 2e-50 UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n... 200 3e-50 UniRef50_Q1MSG8 Chromosomal replication initiator protein dnaA n... 200 3e-50 UniRef50_B8FFL8 Chromosomal replication initiator protein dnaA n... 199 7e-50 UniRef50_Q6ARL8 Chromosomal replication initiator protein dnaA n... 198 9e-50 UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n... 198 1e-49 UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochro... 198 1e-49 UniRef50_Q729U6 Chromosomal replication initiator protein dnaA n... 198 1e-49 UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiell... 198 2e-49 UniRef50_Q3IIL0 Putative regulatory factor involved in inactivat... 198 2e-49 UniRef50_B0S907 Chromosomal replication initiator protein dnaA n... 197 3e-49 UniRef50_C0GTM3 Chromosomal replication initiator protein dnaA n... 196 5e-49 UniRef50_B2S1V1 Chromosomal replication initiator protein dnaA n... 195 8e-49 UniRef50_C1ZD84 Chromosomal replication initiator protein dnaA n... 194 1e-48 UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothio... 194 2e-48 UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n... 194 2e-48 UniRef50_A3ZQ28 Chromosomal replication initiator protein dnaA n... 194 3e-48 UniRef50_D2QZE0 Chromosomal replication initiator DnaA n=1 Tax=P... 192 8e-48 UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosom... 192 9e-48 UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n... 192 1e-47 UniRef50_Q30YX9 Chromosomal replication initiator protein dnaA n... 192 1e-47 UniRef50_B4X369 Chromosomal replication initiator protein DnaA n... 191 1e-47 UniRef50_C7MLD2 Chromosomal replication initiator protein dnaA n... 191 1e-47 UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma pr... 191 2e-47 UniRef50_Q0ATU0 Chromosomal replication initiator protein dnaA n... 191 2e-47 UniRef50_C8WIM6 Chromosomal replication initiator protein dnaA n... 191 2e-47 UniRef50_Q8UIH1 Chromosomal replication initiator protein dnaA n... 191 2e-47 UniRef50_C1A893 Chromosomal replication initiator protein dnaA n... 190 3e-47 UniRef50_D1AW25 Chromosomal replication initiator protein dnaA n... 190 4e-47 UniRef50_D1R6Y2 Chromosomal replication initiator protein dnaA n... 189 6e-47 UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n... 189 7e-47 UniRef50_C8X0Y0 Chromosomal replication initiator protein dnaA n... 189 8e-47 Sequences not found previously or not previously below threshold: >UniRef50_A0Q3U6 Chromosomal replication initiator protein dnaA n=19 Tax=Firmicutes RepID=DNAA_CLONN Length = 448 Score = 296 bits (759), Expect = 3e-79, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G+++ A + + ++++ G G++HL+HA + Q Sbjct: 111 LNPKYTFDSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHYILQ 170 Query: 70 RGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV +K T + E + ++ ++ ID+I+ IAG E + F Sbjct: 171 NTPNAKVVYVSSEKFTNELINSIKDDKNEEFRNKYRNVDVLLIDDIQFIAGKERTQEEFF 230 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K +++++ DRPP+++ L SR +WG I +Q E ++ L+ +A Sbjct: 231 HTFNALYEADK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETRIAILKKKA 289 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++P +V ++ ++ +R L L ++ S R++++ E LK Sbjct: 290 DVENLDIPNEVMVYIATKIKSNIRELEGALIRIVAYSSLTNREISVDLAAEALK 343 >UniRef50_B9DXS7 Chromosomal replication initiator protein dnaA n=13 Tax=Clostridiales RepID=DNAA_CLOK1 Length = 451 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G+++ A + + ++++ G G++HL+HA + Sbjct: 114 LNPKYTFTSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHHILH 173 Query: 70 RGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV +K T + E ++ ++ ID+I+ IAG E + F Sbjct: 174 NNTSCKVVYVSSEKFTNELINSIKDDKNVEFRSKYRNIDVLLIDDIQFIAGKERTQEEFF 233 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K +++++ DRPP+++ L SR +WG I +QP E ++ L+ +A Sbjct: 234 HTFNALYEANK-QIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQPPDFETRMAILKKKA 292 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +P +V ++ ++ +R L L ++ S +++++ E LK Sbjct: 293 DVEKLNIPNEVMAYIATKIKSNIRELEGALIRIVAFSSLTNKEISVDLAIEALK 346 >UniRef50_A8MEA0 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_ALKOO Length = 451 Score = 292 bits (747), Expect = 8e-78, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G+++ A + + ++L+ G G++HL+HA + Sbjct: 114 NLNPKYTFDTFVIGNSNRFAHAASLAVAESPAKAYNPLFLYGGVGLGKTHLMHAIGHFIL 173 Query: 69 QRGDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q V YV + T + E + + ++ +D+I+ IAG E + Sbjct: 174 QNNPKAKVVYVSSETFTNELINSIRHDRNVEFRNRFRTIDVLLVDDIQFIAGKESTQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ES K +++I+ DRPP+++ L SR +WG I +QP E ++ L + Sbjct: 234 FHTFNALHESNK-QIIISSDRPPKEIPTLEDRLRSRFEWGLITDIQPPDLETRIAILYKK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A++ ++P +V + K++ +R L L ++ S ++T+ E LK Sbjct: 293 AQMENIDVPNEVLTHIAKKIQSNIRELEGALIRIVAYSSLTNSEITVELASEALK 347 >UniRef50_A9KPP1 Chromosomal replication initiator protein dnaA n=3 Tax=Clostridiales RepID=DNAA_CLOPH Length = 453 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 108/236 (45%), Gaps = 17/236 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G N++L A + + ++++ G G++HL+H+ + + Sbjct: 113 LNPRYTFDTFVVGANNNLAHAASLAVAESPAEIYNPLFIYGGVGLGKTHLMHSIAHYILE 172 Query: 70 RGD--AVGYVPLDKRTWFVPE-----------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 + V YV +K T + E + ++ ++ ID+I+ I G E + Sbjct: 173 QNPNSKVLYVTSEKFTNELIESIRNADTTPTEFREKYRNIDVLLIDDIQFIIGKERTQEE 232 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + ES K +++I+ D+PP+ + L SR +WG +Q E ++ L+ Sbjct: 233 FFHTFNTLHES-KKQIIISSDKPPKDILTLEERLRSRFEWGLTVDIQSPDYETRMAILKK 291 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L + ++V +++ + +R L L ++ S ++++ + +E LK Sbjct: 292 KEELDCLTIDDEVMKYIASNIKSNIRELEGALTKIVALSRLKKKEVDVILAEEALK 347 >UniRef50_B5Y6N7 Chromosomal replication initiator protein dnaA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N7_COPPD Length = 543 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 + L TF F GD++ L A + + +++W G G++HLLHA L Sbjct: 204 IRLNPRYTFDEFVVGDSNRLAYAGARAVAENPGKRFNPLFIWGGVGLGKTHLLHAIGNYL 263 Query: 68 SQR---GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 Q+ V Y+ ++ T + + + ++ ID+I+ IAG E + Sbjct: 264 LQQQEPDMQVLYITAEEFTNEMVESIKKNSPEDFRAHYRTVDVLLIDDIQFIAGKEATQT 323 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + ++GK +++IT D PP++L L L SR G +Q E ++ L+ Sbjct: 324 EFFHTFNTLYQAGK-QIVITSDHPPQELTLLEDRLRSRFQQGLTVDIQRPDFETRVAILE 382 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A+ G ++P +V F+ + +R L L ++ + +T+ K+ L Sbjct: 383 RKAQKEGLDVPSEVIEFIAHAVATNIRELEGALTKVTALATLQNVPMTLGLAKQAL 438 >UniRef50_C6E7Q5 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOSM Length = 460 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 15/238 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACA 65 L L TF SF G ++ A + + ++++ G G++HL++A Sbjct: 121 LVPNLNPKYTFESFVSGPSNQFAYAASQAVANKPATNYNPLFIYGGVGLGKTHLVNAIGN 180 Query: 66 ELSQRGDAVG--YVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWE 114 + + Y +K + E + + L+ ID+I+ +AG E + Sbjct: 181 HILAKNPKAKICYYSSEKFMNEMINSLRYKKMDEFRNKFRKMDLLLIDDIQFMAGKEATQ 240 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + ES K ++++T D+ P+ + L SR +WG I +QP E K+ L Sbjct: 241 EEFFHTFNALYESHK-QIVVTSDKFPKDIPGLEERLRSRFEWGLIADIQPPGVETKVAIL 299 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++ + LP+DV FL + + +R L L +L+ + +++T+ +E++K Sbjct: 300 KKKSDMHAVNLPDDVALFLAEGANSNIRELEGMLIRLEAFASLTGQEITLSMAREVMK 357 >UniRef50_C1TP64 Chromosomal replication initiator protein dnaA (Fragment) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP64_9BACT Length = 399 Score = 281 bits (721), Expect = 8e-75, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L + F+SF G ++ L A + + +++W G G++HL+HA Sbjct: 63 SGLNPNYLFSSFVVGKSNRLAHAASLAVAESPGAAYNPLFIWGGVGLGKTHLMHAIGHHA 122 Query: 68 SQ--RGDAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMA 116 Q R VGYV +K T + E + L+ ID+I+ +AG E + Sbjct: 123 LQNDRNLKVGYVSSEKFTNELITSIKNNRTAEFRARYRTMDLLLIDDIQFLAGKESTQEE 182 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + + GK +++++ DRPP+ + L SR +WG + +Q E ++ L Sbjct: 183 FFHTFNSLHD-GKKQIVLSSDRPPKDIKSIEDRLVSRFEWGLVTDIQSPDYETRIAILTK 241 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A R + +PEDV +L + + +R L L+++ + +T+ E LK Sbjct: 242 KAEFRNYPMPEDVINYLAQNVPSNIRELEGALNRVIACAELNSEPVTVENTSEWLK 297 >UniRef50_C9M5P8 Chromosomal replication initiator protein dnaA n=2 Tax=Synergistaceae RepID=C9M5P8_9BACT Length = 443 Score = 281 bits (721), Expect = 9e-75, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 15/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWAREGAGRSHLLHAACAE 66 P L + F+SF G ++ L A + +++W G G++HL+HA Sbjct: 106 PTGLNPNYKFSSFVVGRSNRLAHAASLAVADNPGSAYSPLFIWGGVGLGKTHLMHAIGHH 165 Query: 67 LSQRGDA--VGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEM 115 + V YV +K T + E H+ L+ ID+I+ IAG E + Sbjct: 166 ALAQNPRLRVTYVSSEKFTNELITAIKNNKTAEFRSKYRHMDLLLIDDIQFIAGKESTQE 225 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + + K +++++ DRPP++++ L SR +WG + +Q E ++ L+ Sbjct: 226 EFFHTFNTLHD-NKKQIVLSSDRPPKEISDIEERLVSRFEWGLVTDIQQPDYETRIAILK 284 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A R + LP++V +L + + +R L +L+++ + + ++T+ E LK Sbjct: 285 KKAESRNYPLPDEVAAYLAQNIPSNIRELEGSLNRVIACAELSSEQITVERAVEWLK 341 >UniRef50_B5YGT9 Chromosomal replication initiator protein dnaA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNAA_THEYD Length = 438 Score = 281 bits (719), Expect = 1e-74, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 15/242 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 Q+ L TF +F G ++ A + + ++++ G G++HL+ Sbjct: 94 KQVIKKGNLNPKYTFDTFVVGPSNQFAHAASFRVAENPGFAYNPLFIYGGVGLGKTHLIT 153 Query: 62 AACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGD 110 A + + V Y+ ++ T +PE + + + +D+I+ IAG Sbjct: 154 AIGNYILDKKPEMNVCYISSEQFTGEFVSAIRHEKMPEFRNKYRTVDVFLVDDIQFIAGK 213 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 + + F +N + K +++I+ DRPP +++ L SR G I +QP E + Sbjct: 214 DSTQEEFFHTFNELYSKQK-QIVISSDRPPMEISDITDRLRSRFGMGLIADIQPPEIETR 272 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 L L +A + G +LPEDV F+ R+ +R L +L +L + + +++ K + Sbjct: 273 LAILYKKADMEGVKLPEDVAYFIASRVKSNVRELEGSLIKLCAYTSLTKVPISMDVAKYV 332 Query: 231 LK 232 L+ Sbjct: 333 LR 334 >UniRef50_B1YGB2 Chromosomal replication initiator protein dnaA n=258 Tax=Bacteria RepID=DNAA_EXIS2 Length = 464 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G + A + + ++++ G G++HL+HA + Sbjct: 126 QLNEKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGQYVQ 185 Query: 69 QR--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + G + YV ++ T + + ++ ++ ID+I+ +AG E + Sbjct: 186 DQKLGTKIAYVSSEQFTNDFINSIRDNKTVQFRNKYRNIDVLLIDDIQFLAGKEQTQEEF 245 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K +++I+ DRPP+++ L SR +WG I + P E ++ L+ + Sbjct: 246 FHTFNALHNDQK-QIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKK 304 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A ++ +V ++ ++D +R L L ++ + R + E L Sbjct: 305 ANAEQLDVSNEVMLYIASQIDTNIRELEGALTRVIAYANLVGRTIDPNVAAEAL 358 >UniRef50_D0MJZ7 Chromosomal replication initiator protein dnaA n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJZ7_RHOM4 Length = 503 Score = 280 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 16/238 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACA 65 L TF F GD + L + + Q+ ++ G G++HL+ A Sbjct: 161 DSQLDPKYTFERFIEGDCNRLARSAALAIAQQPGATSFNPFLVYGGVGLGKTHLIQAIGN 220 Query: 66 ELSQRGDA--VGYVPLDKRTWFVPEVLD---------GMEHLSLVCIDNIECIAGDELWE 114 Q A + YV ++ T + + H+ L+ +D+I+ G E + Sbjct: 221 YARQHHTAETIRYVSSEQFTNEFVQAIQHNRINEFSLFYRHIDLLIVDDIQFFGGKEKTQ 280 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK +++++ DRPP+ + L SR WG + +QP E ++ L Sbjct: 281 EEFFHIFNALHQTGK-QIVLSADRPPKDIPGIEERLLSRFQWGLMADVQPPDLETRIAIL 339 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +A G EL +DV F+ + R L L +L + +R + + +E L+ Sbjct: 340 RRKAEDEGIELGDDVIEFIAHHVKSNFRELEGALLRLVAHAAYQRRDIDLALAREALR 397 >UniRef50_Q39ZS3 Chromosomal replication initiator protein dnaA n=3 Tax=Geobacter RepID=DNAA_GEOMG Length = 450 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 15/238 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACA 65 L TF +F G ++ A + ++++ G G++HLL A Sbjct: 111 FSTNLNAKYTFDTFVCGGSNQFAHAAALSVANNPAGKYNPLFIYGGVGLGKTHLLTAIGN 170 Query: 66 ELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWE 114 ++ + V + +K + + + + L+ ID+I+ IAG E + Sbjct: 171 QVLTKNRKARVCFYTSEKFMNELINCLRYQKMEQFRNKFRKMDLLLIDDIQFIAGKERTQ 230 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + ES K ++++T D+ P+ + L SR +WG I +QP E K+ L Sbjct: 231 EEFFHTFNALYESHK-QIVVTSDKFPKDIPGLEERLRSRFEWGLIADIQPPDTETKVAIL 289 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A G LP+DV FL +R L L +L + + +T+ +E+LK Sbjct: 290 SKKADSDGIRLPDDVALFLASSASTNVRELEGMLIRLGAVASLTGKNITLDMAREVLK 347 >UniRef50_D2MHN4 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MHN4_9BACT Length = 451 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 15/244 (6%) Query: 3 TPAQLSLPLYL-PDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSH 58 P Q + L TF +F G ++ A + + +++ G G++H Sbjct: 105 APQQTRVHRQLPNPKYTFENFVVGASNQFAHAASLAVAESPARSYNPFFIYGGVGLGKTH 164 Query: 59 LLHAACAELSQRG-DAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIA 108 LL++ + Q+G + YV ++ T + E+ ++ ++ ID+I+ +A Sbjct: 165 LLNSIGNFVMQKGDLRIAYVTTEEFTNEVINSIRYDKMSELRRRYRNIDMLLIDDIQFLA 224 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G E + F +N + E+ K +++++ DR P+++ L SR +WG I LQ E Sbjct: 225 GKERTQEEFFHTFNALYEARK-QIVLSSDRFPKEMPSMEERLRSRFEWGLIADLQQPDVE 283 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L+ ++ G + +DV L + L +R L L +L + +T K Sbjct: 284 TRIAILKKKSEEEGIAIGDDVIHLLAEGLKSNIRELEGALIRLGAYCTLTGQAITTDMAK 343 Query: 229 EILK 232 +L+ Sbjct: 344 TVLR 347 >UniRef50_Q1IVU4 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=Q1IVU4_ACIBL Length = 461 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 19/247 (7%) Query: 4 PAQLSLP----LYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGR 56 Q L F +F G + A + ++L+ G G+ Sbjct: 113 VQQARFDWDGAAQLNPKYIFDNFVTGPGNQFAHAASRAVADRPSKTYNPLFLYGGVGMGK 172 Query: 57 SHLLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIE 105 +HL+ A + + ++ YV +K T + + + ++ ID+I+ Sbjct: 173 THLMQAIGHTIKRNNPEHSICYVSSEKFTNDMINSVRYDKMTSFRERYRTVDVLLIDDIQ 232 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 IA E + F +N + E K +L+I DRPP++L L SR +WG I +QP Sbjct: 233 FIARKERTQEEFFHTFNALHEQQK-QLVIASDRPPKELAEIEDRLRSRFEWGLIADIQPP 291 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E K+ LQ +A +LP DV F+ + +R L L +L S +L + Sbjct: 292 DLETKVAILQKKAESERTQLPTDVALFIASNIRSNVRELEGALIRLVAYSSLTGGELNLM 351 Query: 226 FVKEILK 232 +++LK Sbjct: 352 TAQQVLK 358 >UniRef50_A8EQT0 Chromosomal replication initiator protein dnaA n=11 Tax=Epsilonproteobacteria RepID=DNAA_ARCB4 Length = 438 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 108/232 (46%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G ++ + + + ++++ G G++HLL A + Sbjct: 102 LNPSYTFDSFVVGPSNQMAYNASLAVANKPGIQYNPLFIYGGTGLGKTHLLQAVGNHAIE 161 Query: 70 RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 +G+ V YV +++ + + ++ ID+I+ ++G E + F Sbjct: 162 KGNTVIYVTIEQFMNDFTFSIKNKNMEHFRNKYRKCDVLLIDDIQFLSGKEQTQEEFFHT 221 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + + K ++++T DR P Q+ + L SR +WG +Q E K+ ++ ++ L Sbjct: 222 FNELHNA-KKQIVMTSDRLPSQIAGLVDRLKSRFEWGLTADVQIPGLETKIAIIEKKSEL 280 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G L ++ F+ LD +R + L +++ ++ +++T+P V+ +LK Sbjct: 281 NGICLSREIINFIATNLDNSIREIEGVLIRINASASLLNQEITLPMVQGLLK 332 >UniRef50_Q02D49 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D49_SOLUE Length = 437 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF SF G + A + ++L+ G G++HL+HA +L Sbjct: 103 LNPKFTFNSFVVGACNQFAHAAAKSVATNPSRSYNPLFLYGGVGMGKTHLMHAIGRQLID 162 Query: 70 R--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + + Y ++ + + ++ ID+I+ + E + F Sbjct: 163 QFGSMRIIYTSSERFMNEMISCIRTERMQQFHQRYREADVLLIDDIQLLGNKERTQEEFF 222 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + K +++I+ D PP+ + L L SR +WG + +QP E K+ L +A Sbjct: 223 HTFNELHDHQK-QIVISSDSPPKDIPGLLERLRSRFEWGLMADIQPPDLETKMAILDKKA 281 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + G ELP+DV F+ + +R L L +L S + + +++LK Sbjct: 282 EIEGVELPDDVRTFMASKTKSNVRELEGALVKLIAYSSLTGTPIHLQMAQQVLK 335 >UniRef50_Q21PW4 Chromosomal replication initiator protein dnaA n=132 Tax=Proteobacteria RepID=DNAA_SACD2 Length = 524 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L F +F G ++ L A + + ++++ G G++HL+HA L Sbjct: 187 SNLNPTFIFDNFVVGKSNQLGLAAATQVAENPGGSYNPLFIYGGVGLGKTHLMHAVGNAL 246 Query: 68 --SQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + G V Y+ ++ + + + + ID+I+ AG E + Sbjct: 247 CVRKPGAKVVYLHSERFVADMVKALQLNAINDFKRYYRSVDALLIDDIQFFAGKERSQEE 306 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N +LE G ++++T DR P+++N L SR WG ++P E ++ L+ Sbjct: 307 FFHTFNALLE-GGQQIILTCDRYPKEINGLEERLKSRFGWGLTVAIEPPELETRVAILKR 365 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A G LP D F+ +R+ +R L L ++ + R +++ V+E LK Sbjct: 366 KAEQVGAPLPNDAAFFIAQRIRSNVRELEGALKRVIANAHFTGRDISVELVREALK 421 >UniRef50_C5BKL9 Chromosomal replication initiator protein dnaA n=203 Tax=Bacteria RepID=DNAA_TERTT Length = 593 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ L A + + + ++++ G G++HL+HA L Sbjct: 257 NLNTTFIFDNFVVGKSNQLGLAAASQVAENPGGAYNPLFIYGGVGLGKTHLMHAVGNALV 316 Query: 69 QR--GDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 QR G V Y+ ++ + + + + ID+I+ AG E + Sbjct: 317 QRKPGARVVYLHSERFVADMVKALQLNAISDFKRFYRSVDALLIDDIQFFAGKERSQEEF 376 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +LE G ++++T D+ P+++N L SR WG ++P E ++ L+ + Sbjct: 377 FHTFNALLE-GGQQIILTCDKYPKEINGLEERLKSRFGWGLTVAIEPPELETRVAILKRK 435 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A LP+D F+ +R+ +R L L ++ + QR +++ V+E LK Sbjct: 436 AESSRMPLPDDAAFFIAQRIRSNVRELEGALKRVIANAQFTQRSISVELVREALK 490 >UniRef50_D2QB93 Chromosomal replication initiator protein DnaA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QB93_9SPHI Length = 469 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 16/241 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 L+L YL TF ++ GD + L + + + + ++ G G++HL+ A Sbjct: 128 LTLDSYLNPSYTFDNYVEGDCNRLARSAGYAVAERPGVTSFNPLMIYGGVGLGKTHLVQA 187 Query: 63 ACAELSQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDE 111 + +G V YV +K T + + + ++ ID+++ + E Sbjct: 188 IGNFIKNNNQGKFVLYVTSEKFTNQFLNAVRSDGIRDFTSFYMQVDVLVIDDVQFLQKKE 247 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F ++N + +SGK ++++T DR PR L+ L SR WG LQ E ++ Sbjct: 248 KTQEIFFHIFNHLHQSGK-QIIMTSDRAPRALDGLEDRLLSRFKWGLSADLQTPDLETRI 306 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +Q + + G + + V +L ++ +R L + L + +R++ + K+ L Sbjct: 307 AIIQKKLQAEGIYIDDTVIEYLAHSVNTNVRELEGVIVSLMAQASLNRREIDLELAKQTL 366 Query: 232 K 232 + Sbjct: 367 R 367 >UniRef50_C3PE72 Chromosomal replication initiator protein dnaA n=8 Tax=Corynebacterium RepID=DNAA_CORA7 Length = 546 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G ++ + + +++W G G++HLLHAA Sbjct: 205 SLNPKHTFENFVIGSSNRFANGAAVAVAENPARAYNPLFIWGGSGLGKTHLLHAAGNYAQ 264 Query: 69 --QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 G V YV ++ T +L ++ +D+I+ + G E + Sbjct: 265 VLHPGLRVKYVSSEEFTNDYINSLRDDRQESFKRRYRNLDILMVDDIQFLEGKESTQEEF 324 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ++ K +++++ DRPP+QL L +R + G I +QP E ++ L + Sbjct: 325 FHTFNALHQANK-QIILSSDRPPKQLTTLEDRLRTRFEGGLITDIQPPDLETRIAILMKK 383 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A G ++ V + R + +R L L ++ S +++ + L Sbjct: 384 ASADGTDVDRSVLELIASRFESSIRELEGALIRVSAYSSLVNEPISLEMAEIAL 437 >UniRef50_Q0EVY8 Chromosomal replication initiator protein dnaA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVY8_9PROT Length = 469 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 14/239 (5%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAA 63 L + Y+ TF +F G + A + ++ +YL+ G G++HL++A Sbjct: 129 LLVDGYIDPRFTFENFIVGSGNEFCHAAAQAVAEKPGAIYNPLYLYGGVGLGKTHLINAV 188 Query: 64 CAELS-QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELW 113 L + + Y ++ T + + + ++ ID+I+ IAG + Sbjct: 189 ANALISKNNYRIAYRTGERFTNELIQAIRNGSTDNFRNQYRQVDVLIIDDIQFIAGKDRT 248 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F +N + E K ++++T DR PR L + L SR +WG + +QP E +L Sbjct: 249 QEEFFHTFNALYEI-KKQIILTSDRSPRDLTNLMERLRSRFNWGLVADIQPPDLETRLAI 307 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +A L G + DV L R+ +R L L +L + R + + F + +L+ Sbjct: 308 LSSKAELAGVHMDRDVANLLATRITNNVRELEGALTRLTAHATLTGRTIDVTFARHVLR 366 >UniRef50_A4XFI1 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridia RepID=A4XFI1_CALS8 Length = 454 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 19/239 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH-----SGYIYLWAREGAGRSHLLHAACAE 66 L TF +F G+N+ L A + + ++++ G G++HL+HA Sbjct: 111 TLNPKYTFETFVVGNNNRLAHAAALAVAETPPGEKTYNPLFIYGGVGLGKTHLMHAIGHH 170 Query: 67 LSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + V YV + T + E ++ ++ ID+I+ + G E + Sbjct: 171 VLKLYPDTKVMYVTSEIFTNELIAAIRDEKTDEFRMKYRNVDVLLIDDIQFLGGKERTQE 230 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E+ K ++++ DRPP+++N L SR +WG I +QP E ++ L Sbjct: 231 EFFHTFNTLYEANKK-IILSSDRPPKEINTLEDRLRSRFEWGLITDIQPPDFETRIAILS 289 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA--QRKLTIPFVKEILK 232 + +L G +P+ + F+ +++ +R L L+++ S +++T+ ++ LK Sbjct: 290 KKCQLEGTPVPQHILEFIASKIETNIRELEGALNKILAYSKLMAPDKEITLELAEKALK 348 >UniRef50_C0E1M1 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=C0E1M1_9CORY Length = 594 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 99/245 (40%), Gaps = 18/245 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSH 58 + PAQ L TF ++ D++ L + + ++ +++W G G++H Sbjct: 247 HNPAQ---DDSLNPRYTFDTYVVSDSNKLPTSAAIAVAEKPARAYNPLFVWGDSGLGKTH 303 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECI 107 L+HA Q + YV ++ T +L ++ +D+I+ + Sbjct: 304 LMHAIGNYAQQLDPNLRIKYVSSEQFTNDYINSVRDDRQESFKRRYRNLDILMVDDIQFL 363 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + F +N + + G +++++ DRPP+QL L +R G I + P Sbjct: 364 QGKEGTQEEFFHTFNAL-QQGGKQIVLSSDRPPKQLTTLEDRLRTRFQSGLIADIYPPDL 422 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E ++ L +A DV + + +R L ++ + +++ + Sbjct: 423 ETRIAILMKKAEAEQIVASRDVLELIASQFSSSIRELEGAFIRVSAWASLNNQQINLKTA 482 Query: 228 KEILK 232 ++ L+ Sbjct: 483 EQALE 487 >UniRef50_A4CLW7 Chromosomal replication initiator protein dnaA n=10 Tax=Bacteroidetes RepID=A4CLW7_9FLAO Length = 474 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 107/237 (45%), Gaps = 16/237 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAE 66 L F +F GD++ L + + + + ++ G G++HL HA E Sbjct: 137 SQLNPSYNFENFLEGDSNRLARSAGMAVANKPGGTSFNPLLVFGGVGLGKTHLAHAIGVE 196 Query: 67 LSQRGDA--VGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + V Y+ +K T + + + + ++ ID+++ ++G + Sbjct: 197 IKDKYPERTVLYISAEKFTQQYIESVRKNTRNDFIHFYQLIDVLIIDDVQFLSGKSGTQD 256 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F ++N + ++GK ++++T D+ P + L SR WG +LQ E ++ L+ Sbjct: 257 VFFHIFNHLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAELQSPDYETRVCILK 315 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + G E+PE++ ++ K + +R L + L S ++++T+ +++++ Sbjct: 316 NKLYRDGVEMPEEIIDYVAKHIKSNIRELEGAIISLIAQSSFNKKEVTLDLAQQVVE 372 >UniRef50_A0L3I7 Chromosomal replication initiator protein dnaA n=1 Tax=Magnetococcus sp. MC-1 RepID=DNAA_MAGSM Length = 447 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 15/244 (6%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHL 59 T Q + L TF SF G + + A + + +++ G G++H+ Sbjct: 102 TGDQENFHSGLDPRYTFDSFVVGGCNQFVHAAAARVAEAPAAAYNPLFIHGGVGLGKTHV 161 Query: 60 LHAACAELSQ--RGDAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIA 108 + A + + V Y+ + + + + + ++ +D+I+ IA Sbjct: 162 MQAIGNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVFDFKENFRSVDVLLVDDIQFIA 221 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G + + F +N + E+ K ++++T D P ++ L SR G + +QP E Sbjct: 222 GKKATQEEFFHTFNALYEA-KKQIVMTADSFPHEIEHLEERLRSRFGMGLVADMQPPDLE 280 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ LQ +A G L ++V FL + +R L L ++ + + +T+ VK Sbjct: 281 TRVAILQKKAGSEGLRLADEVAFFLADAVQTNVRELEGALIRVSAYASLTGKPITMALVK 340 Query: 229 EILK 232 E LK Sbjct: 341 ESLK 344 >UniRef50_D1ADA0 Chromosomal replication initiator protein dnaA n=6 Tax=Bacteria RepID=D1ADA0_THECD Length = 721 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G ++ A + ++ ++++ G G++HLLHA Sbjct: 379 RLNPKYTFETFVIGSSNRFAHAAAVAVAEQPAKAYNPLFIYGDSGLGKTHLLHAIGHYAQ 438 Query: 69 Q--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 G V YV ++ T + ++ +D+I+ + G E + Sbjct: 439 SLFSGVRVRYVSSEEFTNDFINAIRDGKADHFRRRYRDIDILLVDDIQFLEGKEQTQEEF 498 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++I+ DRPP+ L L +R +WG +QP E ++ LQ + Sbjct: 499 FHTFNTLHNASK-QIVISSDRPPKDLVTLEDRLRNRFEWGLTTDVQPPELETRIAILQKK 557 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 AR G +P+DV F+ ++ +R L L ++ + ++ + + + +LK Sbjct: 558 ARQEGLAVPQDVVEFIASQIATNIRELEGALIRVTAYASLNRQSVDMRVAETVLK 612 >UniRef50_Q5PB48 Chromosomal replication initiator protein dnaA n=56 Tax=Alphaproteobacteria RepID=DNAA_ANAMM Length = 471 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 17/239 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQ-----EHSGYIYLWAREGAGRSHLLHAA 63 L L TF +F G + L A + + S ++L+ G G++HL+HA Sbjct: 131 LSSPLDPRFTFDNFVVGKPNELAFAAARRVAESSAPIPGSNPLFLYGGVGLGKTHLMHAI 190 Query: 64 CAELSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + + Y+ +K + + + ++ +D+++ I+G + Sbjct: 191 AWYILNSSVKRKIAYLSAEKFMYQYVTALRSKDIMLFKEQFRSVDILMVDDVQFISGKDS 250 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N +++ K +L+I+ DR P L+ + SRL WG + + + E +L Sbjct: 251 TQEEFFHTFNALIDQNK-QLVISADRSPSDLDGVEDRIKSRLGWGLVADINETTFELRLG 309 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQL+ G +P +V FL K + +R L L+++ S R +TI IL Sbjct: 310 ILQLKIEKMGVHVPNEVLEFLAKNIKSNIRELEGALNKVVAHSSLVGRSVTIESASGIL 368 >UniRef50_C0VSM0 Chromosomal replication initiator protein dnaA n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSM0_9CORY Length = 527 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 16/244 (6%) Query: 3 TPAQLSL-PLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSH 58 P Q L TF SF G ++ A + + +Y+W G G++H Sbjct: 172 QPKQAPAANSTLNPKHTFESFVIGKSNQFSQAAAFAVAESPAEAYNPLYIWGGSGLGKTH 231 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECI 107 LLHA Q G V YV ++ T +L ++ +D+I+ + Sbjct: 232 LLHATGNYALQLHPGIRVMYVSSEEFTNDYINSVRDDKQESFKHRYRNLDILMVDDIQFL 291 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + F +N + ++ K +++++ DRPP+ L L +R G I +QP Sbjct: 292 EGKEGTQEEFFHTFNALHQANK-QIILSSDRPPQNLVTLEDRLRTRFQAGLITDIQPPDL 350 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E ++ L+ +A ++ D + +R+L L ++ + R++T V Sbjct: 351 ETRIAILEKKAIAEHVQVDRDSLTEIATPFPGSIRSLEGALIRVTAFASLTHRQITPDLV 410 Query: 228 KEIL 231 +E L Sbjct: 411 REAL 414 >UniRef50_A8LVG8 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=A8LVG8_SALAI Length = 591 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + ++++ G G++HLLHA + Sbjct: 252 RLNPKYMFETFVIGSSNRFAHAASVAVAESPAKAYNPLFIYGSSGLGKTHLLHAIGHYAT 311 Query: 69 QRG--DAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 G +V YV ++ T + ++ ID+I+ + E + Sbjct: 312 TLGNAHSVRYVSTEEFTNDFINSLRDDKTSAFQRRYRDVDILLIDDIQFLENRERTQEEF 371 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++IT DR P+QL L +R +WG + +QP E ++ LQ + Sbjct: 372 FHTFNTLHNANK-QIVITSDRSPKQLATLEDRLRTRFEWGLLADIQPPDLETRIAILQKK 430 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A P DV F+ R+ +R L L ++ + + + + +E+L+ Sbjct: 431 AAQERLFAPPDVLEFIASRVSNSIRELEGALIRVTAFASLTRSSVELSLAEEVLR 485 >UniRef50_A7GVR3 Chromosomal replication initiator protein dnaA n=4 Tax=Campylobacter RepID=DNAA_CAMC5 Length = 436 Score = 266 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 99/240 (41%), Gaps = 16/240 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 AQ +L L TF +F G ++ ++ ++++ G G++HLL Sbjct: 96 AQSTL---LNPAYTFENFVVGGSNEYAFLSAKAASEQPGKIYNPLFIYGPTGLGKTHLLQ 152 Query: 62 AACAELSQRGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + +G V V ++ + + + ++ ID+++ + + Sbjct: 153 SVGNFCLNQGKVVICVTSEQFMTDFTYNINNHSMERFREKYRNCDVLLIDDVQFLGKTDK 212 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + ++++T DR P+ L L +R +WG + + P + K+ Sbjct: 213 IQEEFFHTFNELHSKNG-QIVMTSDRQPKLLKGFEDRLRTRFEWGIMADITPPELDTKIA 271 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +Q + L +DV ++ + +R + + L+ + ++++T+ F K +++ Sbjct: 272 IIQKKCEFDKIYLNKDVINYIATNMGDNIREIESAIINLNAYANLMRQEITLDFAKNVMR 331 >UniRef50_C1F9G6 Chromosomal replication initiator protein dnaA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9G6_ACIC5 Length = 478 Score = 265 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 19/248 (7%) Query: 3 TPAQLSLP----LYLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAG 55 P Q L TF +F G + A + + ++L+ G G Sbjct: 129 MPQQSRFDWSTAAQLNPRYTFDAFVIGSGNQFARAAAEAVAERPSKAYNPLFLYGGVGMG 188 Query: 56 RSHLLHAACAELSQRGDAV--GYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNI 104 ++HL+HA E+ R + YV ++K T + D + L+ ID+I Sbjct: 189 KTHLMHAIGHEVKLRNPSASICYVSVEKFTNEMISSLRYDKMTTFRDKFRSVDLLLIDDI 248 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + ++ E + F +N + E+ K +++I DRPP++L L SR +WG I +QP Sbjct: 249 QFLSQKERTQEEFFHTFNALHENMK-QIVIASDRPPKELPEIEDRLRSRFEWGLIADIQP 307 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E K+ LQ +A LP DV F+ + +R L L +L S ++++ Sbjct: 308 PDLETKVAILQKKAESEHVLLPTDVALFIASNVRTNVRELEGALTRLFAWSQLNGVEISL 367 Query: 225 PFVKEILK 232 ++ LK Sbjct: 368 ATTQQCLK 375 >UniRef50_Q11QR5 Chromosomal replication initiator protein dnaA n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QR5_CYTH3 Length = 471 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 17/247 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGR 56 + +Q + L +F +F GD + L + + + + ++ G G+ Sbjct: 121 VPAVSQ-PIDSQLNASYSFDTFIEGDCNKLARSAGLAVANKPGVTSFNPLLVYGNVGLGK 179 Query: 57 SHLLHAACAELSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIE 105 +HL+ A ++ + V Y+P ++ E + L ++ +D+++ Sbjct: 180 THLVQAIGNQIKKNHADKKVLYMPSERFLSQFIEAMKNNQSQEFTNQFLGLDVLILDDVQ 239 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 ++G E + F ++N + +SGK +++IT D P+ + L SR WG LQ Sbjct: 240 FLSGKEKTQEIFFHIFNHLHQSGK-QIIITSDCAPKDIKGLQERLLSRFKWGLSADLQVP 298 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E + + + + G E+ DV +L +D MR L ++ L + R++ + Sbjct: 299 DYETRNAIICKKMQFEGIEIAADVIDYLAYSVDTNMRDLEGVVNSLIAQHTLSGRQIDLE 358 Query: 226 FVKEILK 232 K+I++ Sbjct: 359 LAKQIIQ 365 >UniRef50_C0EA18 Chromosomal replication initiator protein dnaA n=2 Tax=Clostridiales RepID=C0EA18_9CLOT Length = 454 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 108/231 (46%), Gaps = 15/231 (6%) Query: 16 DETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELSQRGD 72 + TF +F G +++ A + Q+ ++++ G G++HLL A E+ ++ Sbjct: 120 EYTFDTFIVGSSNTFAYAACKAVAQQQSGAYNPLFIYGPSGLGKTHLLMAISHEIKRQNP 179 Query: 73 --AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + Y+ + + E + + ++ +D+I+ +AG + F + Sbjct: 180 DTNILYINGEAFANELITAIGRQATNEFREKYRRVDILLMDDIQFLAGKTQTQEEFFYTF 239 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + + GK ++++T DRPP+ + L +R +WG + + P E ++ ++ +A+L Sbjct: 240 NDLHQVGK-QIVLTSDRPPKDIKTLEERLRTRFEWGLLADISPPDFETRIAIIRRKAQLL 298 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 E+P++V F+ RL +R L + ++ + A +I + +++ Sbjct: 299 DIEMPDEVAEFIANRLKNNIRQLEGAVKKIKAYKLLAGSPPSISMAQTVIR 349 >UniRef50_A6GYW8 Chromosomal replication initiator protein dnaA n=21 Tax=Bacteroidetes RepID=DNAA_FLAPJ Length = 478 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 109/241 (45%), Gaps = 16/241 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 L + L + +F +F GD++ L + + + + ++ G G++HL HA Sbjct: 136 LKIESQLNANYSFDNFLEGDSNRLARSAGMAVANKPGGTSFNPLLIFGGVGLGKTHLAHA 195 Query: 63 ACAELSQRGDA--VGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDE 111 E+ ++ V Y+ + T + + + + ++ ID+++ ++G Sbjct: 196 IGVEVKEKYPEKTVLYISAEIFTQQYIESVKKNNRNDFIHFYQLIDVLIIDDVQFLSGKT 255 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F ++N + ++GK ++++T D+ P + L SR WG ++ E ++ Sbjct: 256 GTQDVFFHIFNYLHQNGK-QVILTSDKAPVDMQDIEQRLLSRFKWGLSAEIHQPDYETRI 314 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ G E+PE++ ++ + + +R L + L S ++++T+ K+++ Sbjct: 315 SILKNILYRDGVEMPEEIIEYVARNIKSNVRELEGAIISLIAQSSFNKKEVTLELAKQVV 374 Query: 232 K 232 + Sbjct: 375 E 375 >UniRef50_C4FYD8 Chromosomal replication initiator protein dnaA n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FYD8_9FIRM Length = 461 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 92/235 (39%), Gaps = 18/235 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L + TF++F G+ + + A + ++ G G++HL+ A E+ Sbjct: 124 SQLNPNYTFSNFVIGEANKMAHAAALTVCDAPGETYNPYLIYGGVGLGKTHLMQAIGNEI 183 Query: 68 --SQRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 Q + Y + T + E + ++ ID+I+ ++ Sbjct: 184 LSRQPHAKIKYATTESFTNDFITALEKNTIEEFRHMYRKIDVLLIDDIQFLSNKNKTREE 243 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + GK ++++T DR P L+ L SR WG + P E ++ L+ Sbjct: 244 FFHTFNELYNHGK-QIVMTCDRLPSSLSGLEDRLISRFAWGLQIDITPPDFETRIAILRK 302 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A E D +++ ++ +R L L ++ + R++T E L Sbjct: 303 KASN---EFSADTLQYIASHVNTNIRELEGALTRVTAYATIHNREITTNLAAEAL 354 >UniRef50_Q9CLQ4 Chromosomal replication initiator protein dnaA n=3 Tax=Gammaproteobacteria RepID=DNAA_PASMU Length = 451 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 16/243 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLL 60 Q + YL F +F G ++ L A+ + ++L+ G G++HLL Sbjct: 107 PQTVIRSYLNPKHVFENFVEGKSNQLARAVAQKVADNPGEPSSNPLFLYGGTGLGKTHLL 166 Query: 61 HAACAELSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAG 109 HA + R V Y+ + + E L + +D+I+ A Sbjct: 167 HAIGNGILSRNTNARVLYIHANNFMQQMVNAVRDNKMDEFKKFYRSLDALLVDDIQFFAE 226 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F ++N + ++G+ ++++T DR P+++ L SR WG ++P E Sbjct: 227 KEKTQEEFFHIFNNLFDTGR-QIILTSDRYPKEIEKLEERLKSRFGWGLTTAIEPPELET 285 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L +A + LPE+V F+ ++L +R L L+++ + +TI FV+E Sbjct: 286 RVAILLKKAEEKNIYLPEEVAFFIGQKLRTNVRDLEGALNRVSANAEFMGAAITIDFVRE 345 Query: 230 ILK 232 LK Sbjct: 346 TLK 348 >UniRef50_B3QRY8 Chromosomal replication initiator protein dnaA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QRY8_CHLT3 Length = 496 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 16/240 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAA 63 YL F +F GD + L A + + + ++ G G++HL+ A Sbjct: 152 RFESYLNPKYRFENFVKGDCNDLAHAAAKSVSETPGKSSFNPLVIYGGVGLGKTHLIQAI 211 Query: 64 CAELSQRGDA--VGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + A V YV +K T E ++ L+ ID+I+ E Sbjct: 212 GNHARENNKAKFVMYVSSEKFTIEFVNAIQNNQAHEFSAFYRNVDLLIIDDIQFFERKEK 271 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + IF ++N + ++ K +++++ DRP ++L L SR WG LQ E + Sbjct: 272 TQEEIFHIFNTLHQANK-QIVLSSDRPIKELKGIEERLLSRFQWGLTADLQLPDYETRRA 330 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LQ + L E + F+ + +R L L +L + + + +P K IL+ Sbjct: 331 ILQRKLEENSATLDESIIDFIATNMTSNIRELEGCLVKLLATASLNAKSIDLPLAKNILR 390 >UniRef50_A5UP91 Chromosomal replication initiator protein dnaA n=7 Tax=Bacteria RepID=DNAA_ROSS1 Length = 481 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 20/247 (8%) Query: 4 PAQLSLPLY-----LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAG 55 P QL L L TF F G ++ L A + + ++L+ G G Sbjct: 128 PQQLELHRAVRSSMLNPRYTFDRFIIGPSNRLANAACMAVAEHPAQAYNPLFLYGGVGLG 187 Query: 56 RSHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNI 104 ++HLLHA + R V YV + T + E ++ ++ ID+I Sbjct: 188 KTHLLHAIGNFVLDRDPEVNVLYVSSETFTNDLINSIRRQQTEEFRIRYRNIDILLIDDI 247 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 + IAG E + F +N + +GK +++I+ DR P+ + L SR +WG I +Q Sbjct: 248 QFIAGKEQTQEEFFHTFNTLHSAGK-QIVISSDRSPKAILTLEERLRSRFEWGLIVDVQM 306 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 E + L+ +A +P+ V FL +R+ +R L L+++ + +TI Sbjct: 307 PDLETRTAILRAKAEQSPVPVPQPVIDFLAQRIQSHIRELEGCLNRVTAFAQMYNVPVTI 366 Query: 225 PFVKEIL 231 L Sbjct: 367 EVATAAL 373 >UniRef50_Q5FUU1 Chromosomal replication initiator protein dnaA n=60 Tax=Alphaproteobacteria RepID=DNAA_GLUOX Length = 479 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 113/238 (47%), Gaps = 15/238 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 L + L TF +F G + A + ++ S ++L+ G G++HL+HA Sbjct: 140 LAVPLDPRFTFDTFIVGKPNEFAYACARRVAEKPSSPGFNPLFLYGGVGLGKTHLMHAIG 199 Query: 65 AELSQRGD-AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 EL++ G +V Y+ +K E + + + ++ ID+++ + G + + Sbjct: 200 TELTRTGKVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRSVDVLMIDDLQFLIGKDNTQ 259 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N ++++G+ +++++ D+ P L+ L +RL G + + + E ++ L Sbjct: 260 EEFFHTFNALVDAGR-QIIVSADKSPSDLSGLEDRLRTRLGCGMVADIHATTFELRISIL 318 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +A+ G +P V +L ++ +R L L++L + R +T+ +++LK Sbjct: 319 EAKAKASGTHVPSKVLEYLAHKITTNVRELEGALNRLIAHADLVGRPVTLDTTQDVLK 376 >UniRef50_B1VPF0 Chromosomal replication initiator protein dnaA n=38 Tax=Bacteria RepID=DNAA_STRGG Length = 622 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + ++++ G G++HLLHA Sbjct: 282 RLNPKYLFDTFVIGASNRFAHAAAVAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYAR 341 Query: 69 Q--RGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 G V YV ++ T + ++ +D+I+ +A E + Sbjct: 342 SLYPGTRVRYVSSEEFTNEFINSIRDGKGDTFRKRYRDVDILLVDDIQFLASKESTQEEF 401 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++++ DRPP+QL L +R +WG +QP E ++ L+ + Sbjct: 402 FHTFNTLHNANK-QIVLSSDRPPKQLVTLEDRLRNRFEWGLTTDVQPPELETRIAILRKK 460 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A P +V F+ R+ R +R L L ++ + ++ + + + +LK Sbjct: 461 AVQEQLNAPPEVLEFIASRISRNIRELEGALIRVTAFASLNRQPVDLGLTEIVLK 515 >UniRef50_D2NQA7 ATPase involved in DNA replication initiation n=2 Tax=Rothia mucilaginosa RepID=D2NQA7_9MICC Length = 564 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 17/237 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL- 67 L + TF +F G ++ A + ++ ++++ G G++HLLHA Sbjct: 219 RLNPNYTFDTFVIGQSNRFAHASAFAVAEQPGIVYNPLFIYGGSGLGKTHLLHAIGHYTK 278 Query: 68 -SQRGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T ++ ++ ID+I+ +AG E Sbjct: 279 YLYPNLRVRYVNSEEFTNDFINSIRDDEGSSFKQIYRNVDVLLIDDIQFLAGKEATMEEF 338 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K +++IT D PP+QL + SR G +QP E ++ L+ + Sbjct: 339 FHTFNALYNHQK-QIVITSDLPPKQLTGFAERMRSRFGSGLNVDVQPPELETRIAILRKK 397 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ--RKLTIPFVKEILK 232 A+ + +DV ++ + +R L L + A+ + +T+ + LK Sbjct: 398 AQNEILPVRDDVMEYIASHVTANIRELEGALIRASAAASMKKPPEPITLAEAETYLK 454 >UniRef50_C5C7X4 Chromosomal replication initiator protein dnaA n=19 Tax=Bacteria RepID=DNAA_MICLC Length = 515 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAEL 67 L D F +F G ++ A N + + + ++++ G G++HLLHA Sbjct: 172 SRLNDRYHFETFVIGSSNRFAHAAANAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYA 231 Query: 68 SQ--RGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 + G V YV ++ T ++ ++ ID+I+ +A E Sbjct: 232 RRLYPGLRVRYVNSEEFTNDFINSIRHDEGASFKQVYRNVDILLIDDIQFLADKEATVEE 291 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + + K +++IT D PP+QL+ L SR +WG I +QP E ++ L+ Sbjct: 292 FFHTFNTLYNNNK-QVVITSDLPPKQLSGFEDRLRSRFEWGLITDIQPPDLETRIAILRK 350 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A G P + ++ R+ +R L L ++ + ++ + I + +LK Sbjct: 351 KAEAEGLVAPPEALEYIASRISTNIRELEGALIRVTAFASLNRQTVDIELAEHVLK 406 >UniRef50_C8PKQ3 Chromosomal replication initiator protein dnaA n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKQ3_9PROT Length = 442 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 102/232 (43%), Gaps = 13/232 (5%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ F +F GD++ + +E ++++ G G++HLL + + Sbjct: 103 LSENYNFENFIIGDSNKFAFECSVSVAKEPGIRFNPLFIYGPSGLGKTHLLQSIGNYCIK 162 Query: 70 RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 +G V V ++ + + + ++ ID+I+ + G + + +F Sbjct: 163 KGKTVICVTSEQFANDFVFNLKNNSIDKFKQKYRNCDVLLIDDIQFLIGRDKAQEELFYT 222 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + + ++++T D PP+ L L +R + G I + P + E K+ + ++ Sbjct: 223 FNELKDKN-CQIVLTNDLPPKFLKGFENRLTTRFESGIIANITPPNLETKIAIINKKSEE 281 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +P DV ++ + +R + +++L+ S + K+T+ F K L+ Sbjct: 282 NRVRIPHDVVEYIAANMGDNIREIEGAINKLNAYSSILRTKITLEFTKSTLQ 333 >UniRef50_A5Z7E4 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A5Z7E4_9FIRM Length = 462 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 102/244 (41%), Gaps = 20/244 (8%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 L L TF SF G N+++ + + ++++ G G++HL+ + Sbjct: 115 ILDANLNKKYTFDSFVVGSNNNIAQVTSLAVAESPGDVYNPLFIYGGVGLGKTHLIQSIG 174 Query: 65 AELSQRGD--AVGYVPLDKRTWF--------------VPEVLDGMEHLSLVCIDNIECIA 108 + + V Y + T + E + ++ ID+I+ I+ Sbjct: 175 NFVLKNNPSAKVLYTTSESFTNEVIDLLRKKKTNQEEIIEFRKKYRSVDVLLIDDIQFIS 234 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G + + IF+++N + K ++++T D+ P+ + L SR + G +Q E Sbjct: 235 GRDRTQEEIFNIFNDLFMKHK-QIVLTSDKKPKDMEGIAERLISRFEQGLTVDIQNPDYE 293 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ L+ +A G+ + E V +++ +R L +L ++ S + +T+ F Sbjct: 294 TRMAILKKKAETSGYNIDEGVLQYIANHFVSNVRELEGSLTRVITFSKISHSPITVDFAS 353 Query: 229 EILK 232 +L+ Sbjct: 354 GVLQ 357 >UniRef50_C9KQB2 Chromosomal replication initiator protein dnaA n=2 Tax=Veillonellaceae RepID=C9KQB2_9FIRM Length = 490 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L TF +F G ++ A + + +++ G G++HL+HA + Sbjct: 151 SSLNPKYTFETFVTGSSNRFAHAAAMAVAESPGKVYNPFFMYGGVGLGKTHLMHAIGNRV 210 Query: 68 SQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 Q V YV ++ T + + ++ +D+I+ ++G + + Sbjct: 211 LQNHPEMRVLYVSSEQFTNEIIRAIQEGKAELFRQKYRTIDVLMVDDIQFLSGKQSTQEE 270 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N + + K +++++ DRPPR++ L SR + G I +Q E ++ L+ Sbjct: 271 FFNTFNALHVADK-QIILSSDRPPREVQKLEDRLRSRFEGGLITDIQAPDLETRIAILKN 329 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A L ++P DV F+ R+D +R L L ++ + + +T V E LK Sbjct: 330 KALLDHVDVPNDVLMFIANRIDSNIRELEGALTRVVAYASLINKPVTTDVVAEALK 385 >UniRef50_Q8DL93 Chromosomal replication initiator protein dnaA n=6 Tax=Cyanobacteria RepID=DNAA_THEEB Length = 453 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 94/235 (40%), Gaps = 15/235 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L F+ + G N+ + A + + ++L G G++HL+ A Sbjct: 111 SELNPKYVFSRYVVGPNNRMAHAACLAVAESPGREFNPLFLCGGVGLGKTHLMQAIGHYR 170 Query: 68 SQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + + YV ++ T + + + ++ +D+I+ I G E + Sbjct: 171 LEIDPNAKIFYVSTEQFTNDLIAAIRKDSMQSFREHYRAVDVMLVDDIQFIEGKEYTQEE 230 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + E+GK ++++ DRPP Q+ L SR G I +QP E ++ LQ Sbjct: 231 FFHTFNTLHEAGK-QVVLASDRPPSQIPRLQERLCSRFSMGLIADIQPPDLETRMAILQK 289 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A LP +V ++ +R L L + + +T+ + +L Sbjct: 290 KAEYENIRLPREVIEYIAASYTSNIRELEGALIRAVAYISISGLPMTVENIAPVL 344 >UniRef50_A5KS09 Chromosomal replication initiator protein dnaA n=4 Tax=candidate division TM7 RepID=A5KS09_9BACT Length = 486 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 14/229 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF ++ G N+ L A + + I+++ G G++HL+ A E++ Sbjct: 151 SLNPRYTFETYIVGSNNDLAYAACQAVAKSPGRKYNPIFIYGGVGLGKTHLIQAVGNEIA 210 Query: 69 QRGD--AVGYVPLDKRTWFVPE--------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + YV + E D ++ ++ ID+I+ IAG E + F Sbjct: 211 HTDRAARILYVNTETFVNEFLEYIRFKKKGFSDRYRNVDVLIIDDIQFIAGKEKTQEEFF 270 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + ++ K +++I+ D+PPR + L SR +WG +Q E + ++ +A Sbjct: 271 HTFNVLHQANK-QIIISSDKPPRSIPTLTERLRSRFEWGMAIDIQIPDFETRSAIIETKA 329 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 G ELP + ++ + +R L L+QL I Sbjct: 330 SQAGIELPRETVEYMASNIKTNIRELEGALNQLLAFCEMRGVTPDIQTA 378 >UniRef50_B2J2B2 Chromosomal replication initiator protein dnaA n=9 Tax=Cyanobacteria RepID=DNAA_NOSP7 Length = 459 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L F+ F G N+ + A + + ++L G G++HL+ A Sbjct: 118 ELNSKYVFSRFVVGANNRMAHAASLAVAESPGKEFNPLFLCGGVGLGKTHLMQAIGHYRW 177 Query: 69 Q--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV ++ T + + ++ +D+I+ + G E + Sbjct: 178 KICPDCKIFYVSTEQFTNDLITAIRKDSMQSFREHYRAADVLLVDDIQFLEGKEYTQEEF 237 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+GK +++I DRPP Q+ L SR G I +Q E ++ LQ + Sbjct: 238 FYTFNTLHEAGK-QVVIASDRPPNQIPSLQERLCSRFSMGLIADIQKPDLETRMAILQKK 296 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A LP DV ++ +R L L + +T+ + +L+ Sbjct: 297 AEDENIRLPRDVIEYIASNYTSNIRELEGALIRAVAYISIWGLPMTVENITPVLE 351 >UniRef50_Q2S2T8 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2T8_SALRD Length = 564 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL 67 +L + TF F GD + L + + QE + ++ G G++HL A Sbjct: 220 HLRPEYTFDEFVEGDGNRLARSAAFAVAQEPGSTNYNPLLVYGGVGLGKTHLAQAVANYA 279 Query: 68 SQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + + V YV D+ T + L+ +D+++ E + Sbjct: 280 LEHNTAERVLYVSSDRFTSQFVQSVRENRIAAFSSYYRQADLLIVDDVQFFGEKEKTQEE 339 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F ++N + ++GK ++ + DRPP ++ L SR WG +Q E ++ LQ Sbjct: 340 FFHIFNDLHQNGK-QIFLCADRPPAEIPGIEERLLSRFQWGLSADIQRPDLETRIAILQR 398 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A + + DV + +R+D +R L L +L R L + + L+ Sbjct: 399 KAARQDIAVSPDVLELIAQRIDSNVRQLEGALTRLTALVQLDDRTLDLDTARRFLR 454 >UniRef50_B9L0U6 Chromosomal replication initiator protein dnaA n=3 Tax=Bacteria RepID=DNAA_THERP Length = 465 Score = 260 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 19/249 (7%) Query: 2 NTPAQLSL-PLY---LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGA 54 + QLSL P L TF F G N+ L A + ++++ G Sbjct: 104 SASKQLSLTPSPEHGLNPRYTFEKFVVGPNNRLAHAAALAVADRPGEKFNPLFIYGGVGL 163 Query: 55 GRSHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDN 103 G++HLLHA V YV + T + + + + ++ ID+ Sbjct: 164 GKTHLLHAIGHRALANRPTLKVCYVSSEVFTNELINAIRHQRTDDFRNRYRTIDILMIDD 223 Query: 104 IECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQ 163 I+ IAG E + F +N + +SGK +++I+ DRPPR + L SR + G + +Q Sbjct: 224 IQFIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPRLIPDLADRLRSRFEGGLLADIQ 282 Query: 164 PLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 P E + L + R G ++P DV F+ +R++ +R L L+++ + + +T Sbjct: 283 PPDLETRQAILIEKGRELGVQMPSDVVEFVARRIESNIRELEGALNRIVALAQLTHQPIT 342 Query: 224 IPFVKEILK 232 + E L+ Sbjct: 343 LALAVEALR 351 >UniRef50_B0VID0 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID0_9BACT Length = 443 Score = 260 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 100/239 (41%), Gaps = 18/239 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 + L + TF F G N++ + + + ++++ G G++HL+ A Sbjct: 101 NVRLNERYTFDEFVVGKNNNFAYSAAKAVAESPGYTYNPLFIYGESGMGKTHLMQAIGNY 160 Query: 67 LSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + G ++ Y+ + T + PE + L+ +D+I ++ E + Sbjct: 161 ILKEGRNCSIYYITSEAFTNEMIDGIRSNKMPEFRAKFRKVDLLLMDDIHFLSRKEGTQE 220 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E K ++++T DRPP+ + L +R + G + L+ E ++ L+ Sbjct: 221 EFFHTFNALFE-NKKQIVLTSDRPPKDIPDLEKRLVTRFESGLLCDLKSPDFETRVAILR 279 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ---RKLTIPFVKEIL 231 +A L + + F+ + +R L +L ++ S + + I EIL Sbjct: 280 KKAEPENVVLSDAIFNFIADNITSSVRALEGSLIRILAFSSYNKLNPEDIDINLAAEIL 338 >UniRef50_B6BVS5 Chromosomal replication initiator protein dnaA n=1 Tax=beta proteobacterium KB13 RepID=B6BVS5_9PROT Length = 450 Score = 259 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + F +F G + L A + + ++++ G G++HLL + ++ Sbjct: 114 GLNKNLNFENFVTGRANQLATAAAKQVSERPGESYNPLFIYGGVGLGKTHLLQSIGNKVK 173 Query: 69 QRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + Y+ ++ V + L L+ ID+I+ I + Sbjct: 174 EENKDFKIKYLHAERYVTDVVKAYEGKTFDQFKKNYHSLDLLLIDDIQFIGKKNRTQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N ++E K +++IT D P+++ L +R WG ++P E ++ L + Sbjct: 234 FYAFNTLIE-NKKQIIITCDSYPKEIQGVDERLRTRFSWGLTVAIEPPELEMRVAILLKK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A + LPEDV F+ K++ +R L L+++ S + + KE LK Sbjct: 293 AEISKITLPEDVAFFIAKQIRSNVRELEGALNRIVALSNFTNLPIDLNLAKEALK 347 >UniRef50_D1C5C4 Chromosomal replication initiator protein dnaA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5C4_SPHTD Length = 471 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 19/246 (7%) Query: 4 PAQLSLPL----YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGR 56 P QL L L F F G N+ L A + + +Y++ G G+ Sbjct: 119 PQQLELTATPEHGLNPRYVFEKFVVGSNNRLAHAAALAVADRPADKFNPLYIYGGVGLGK 178 Query: 57 SHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIE 105 +HLLHA R + YV + T + + + + ++ ID+I+ Sbjct: 179 THLLHAIGHRALARSPELRIRYVSSETFTNELINAIRQQRTEDFRNRYRTIDILMIDDIQ 238 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 IAG E + F +N + +SGK +++I+ DRPP+ + L SR + G + +QP Sbjct: 239 FIAGKESTQEEFFHTFNALYQSGK-QIVISSDRPPKAIPTLADRLRSRFEGGLLADIQPP 297 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E + L + R G +P+DV ++ ++++ +R L L+++ S R +++ Sbjct: 298 DLETRAAILAEKGRELGVTVPDDVLEYVARKVESNIRELEGALNKIIALSQLYHRPISME 357 Query: 226 FVKEIL 231 E L Sbjct: 358 LAIEAL 363 >UniRef50_C6MB19 Chromosomal replication initiator protein dnaA n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MB19_9PROT Length = 474 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G + L A + + ++++ G G++HL+ A + Sbjct: 138 GLNPNFTFDNFITGKANQLARAGAIQVAESPGVAYNPLFIYGGVGLGKTHLIQAIGNYVH 197 Query: 69 QRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + + YV +K V + L L+ +D+++ G + Sbjct: 198 ENNKSAKIRYVHAEKYVSDVVSAYQHKAFDKFKLYYHSLDLLLVDDVQFFGGKNRTQEEF 257 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N ++E+ K +++IT D P+++ L SR WG ++P E ++ L + Sbjct: 258 FYAFNALIETHK-QVIITCDTYPKEITGLEERLVSRFGWGLTVAVEPPELEMRVAILLKK 316 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A + L E+V F+ K + +R L L ++ S + +T+ KE LK Sbjct: 317 AEMEKIRLDENVAFFIAKHIRSNVRELEGALKRVLAFSRFVNQDITLDLAKEALK 371 >UniRef50_C2KT33 Chromosomal replication initiator protein dnaA n=3 Tax=Mobiluncus RepID=C2KT33_9ACTO Length = 533 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 17/247 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSH 58 Q+ L TF SF G ++S AA + + ++++ G G++H Sbjct: 179 PASMQIDRNTGLNPMYTFESFVIGSSNSFTAAAAESVVVSPAQAYNPLFIYGGSGLGKTH 238 Query: 59 LLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECI 107 LLHA + V YV ++ T PE+ + + ID+I+ + Sbjct: 239 LLHAIGNYALELYPQAKVRYVSSEEFTNDFINAIATQTFPELQAKYREVDFLLIDDIQFL 298 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E F +N + + K +++IT D PP++L + SRL+WG + +QP + Sbjct: 299 QGKEQTLEEFFHTFNTLHTARK-QVVITSDVPPKELKSFEERIKSRLEWGLLTDIQPPNL 357 Query: 168 EDKLQALQLRARLRGFE-LPEDVGRFLLKRLDREMRTLFMTLDQLDRA-SITAQRKLTIP 225 E ++ L+ ++ + + V ++ + +R L L ++ +++ +++ Sbjct: 358 ETRIAILRRKSAQENLQGYDDAVLEYIASNISSNIRELEGALLRVTAYAALSGGGSVSLD 417 Query: 226 FVKEILK 232 KEIL+ Sbjct: 418 TAKEILR 424 >UniRef50_C7M114 Chromosomal replication initiator protein dnaA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M114_ACIFD Length = 458 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 15/235 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAEL 67 TF +F G ++ A + + +++ G G++HLLHA Sbjct: 116 STFDPRYTFEAFVIGSSNRFAHAAALSVAETPARSYNPLFIHGDAGLGKTHLLHAIGNYA 175 Query: 68 SQRGDAVG--YVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + + YV + E ++ +D+I+ + G E + Sbjct: 176 RENYPNLLTTYVSTETFLNEFVDAIKRNQTSEFKARYRACDILLVDDIQFLEGKEAIQEE 235 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +N + + K ++++T DRPPR L L SR G I +QP E + L+ Sbjct: 236 FFHTFNTLYGAQK-QIVLTSDRPPRALATLEDRLRSRFAMGLITDVQPPDLETRAAILRR 294 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A G +P V F+ + +R L L +L S +Q +T+ +++L Sbjct: 295 KAEDAGVTVPATVIEFIAASITDNIRELEGALTRLAAFSTLSQTGITLTMAEQVL 349 >UniRef50_B0TWF7 Chromosomal replication initiator protein dnaA n=35 Tax=Francisella RepID=DNAA_FRAP2 Length = 491 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 15/242 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 + S L L + F SF GD + + A + ++++ G G++HL+ Sbjct: 148 QEYSFGLPLKEKYVFDSFVVGDANKIARAAAMQVSINPGKLHNPLFIYGGSGLGKTHLMQ 207 Query: 62 AACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGD 110 A + + Y ++ E ++ ID+I+ IAG Sbjct: 208 AIGNHAREVNPNARIIYTNSEQFIKDYVNSIRLQDQDEFQRVYRSADILLIDDIQFIAGK 267 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E F +N + E+GK ++++T D+ P ++ L SR +G + E + Sbjct: 268 EGTAQEFFHTFNALYENGK-QIILTSDKYPNEIEGLEERLVSRFGYGLTVSVDMPDLETR 326 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + L +A G +LP + F+ + + +R L L+++ S + TI + Sbjct: 327 IAILLKKAHDLGQKLPNETAAFIAENVRTNVRELEGALNRVLTTSKFNHKDPTIEVAQAC 386 Query: 231 LK 232 L+ Sbjct: 387 LR 388 >UniRef50_B2AFZ7 Chromosomal replication initiator protein dnaA n=94 Tax=Proteobacteria RepID=DNAA_CUPTR Length = 589 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L TF +F G + L A + +YL+ G G++HL+H+ + Sbjct: 252 SRLNPILTFDNFVTGKANQLARAAAIQVANNPGKSYNPLYLYGGVGLGKTHLIHSIGNHM 311 Query: 68 SQRGDAVG--YVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 Y+ ++ V E L L+ ID+I+ +G + Sbjct: 312 LMENPRARIRYIHAEQYVSDVVKAYQRKAFDEFKRYYHSLDLLLIDDIQFFSGKNRTQEE 371 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F + ++ + + +++IT D P+++ L SR D G ++P E ++ L Sbjct: 372 FFYAFEALI-ANRAQVIITSDTYPKEITGIDDRLISRFDSGLTVAIEPPELEMRVAILMK 430 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A +PE+V F+ K L +R L L ++ S + +TI +E LK Sbjct: 431 KAAAENVNVPEEVAFFVAKHLRSNVRELEGALRKILAFSNFHGKDITIEVTREALK 486 >UniRef50_B9XCQ3 Chromosomal replication initiator protein dnaA n=1 Tax=bacterium Ellin514 RepID=B9XCQ3_9BACT Length = 462 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS- 68 TF +F G N++ A + Q ++L+ G G++HLLHA + Sbjct: 126 FNPKNTFETFVVGGNNNFAHAAAQAVAQAPGKSYNPLFLYGGVGLGKTHLLHAIGHHVLS 185 Query: 69 -QRGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++G V YV +K T + ++ ID+I+ +AG E + F Sbjct: 186 HKKGARVAYVSSEKFTNEYIDAIQNNQIAKFRKKYRQTDVLLIDDIQFLAGKERIQEEFF 245 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E+ K ++++T DRP ++ L SR +WG + LQP E ++ L+ +A Sbjct: 246 HTFNALHEAHK-QIVLTCDRPASEIQNLEHRLVSRFEWGLVTDLQPPDIETRMAILRKKA 304 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G ELPED+ FL R+ +R L L ++ + +KLTI V+ +L+ Sbjct: 305 ASMGVELPEDILNFLANRIRANIRRLEGALIRVASYASLTGKKLTIEVVEGLLR 358 >UniRef50_Q8KGG6 Chromosomal replication initiator protein dnaA n=10 Tax=Chlorobiaceae RepID=DNAA_CHLTE Length = 493 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 16/240 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAA 63 L TF++ GD +SL A + Q + ++ G G++H++ A Sbjct: 149 RFESNLNPKYTFSTLVRGDCNSLAFAASKSIAQNPGQNAFNPLVIYGGVGLGKTHMMQAI 208 Query: 64 CAELSQR--GDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + + DAV YV +K + E ++ ++ ID+I+ AG E Sbjct: 209 GNSVLENRITDAVLYVSSEKFAIDFVNAIQNGNIQEFSAFYRNIDVLIIDDIQFFAGKEK 268 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + IF ++N + +S K +++++ DRP +++ L SR +WG +Q E + Sbjct: 269 TQEEIFHIFNTLHQSNK-QIILSADRPIKEIKGIEDRLISRFNWGLSTDIQAPDYETRKA 327 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +Q + + G L V F+ + +R L + +L A +++ + F K LK Sbjct: 328 IIQSKLKQSGVSLDPVVIEFIATNVTSNVRELEGCIVKLLAAHSLDNQEIDLQFAKSTLK 387 >UniRef50_Q2JH46 Chromosomal replication initiator protein dnaA n=1 Tax=Frankia sp. CcI3 RepID=Q2JH46_FRASC Length = 562 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 101/243 (41%), Gaps = 19/243 (7%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLL 60 PAQ L F +F GD++ A + + ++++ G G++HLL Sbjct: 216 PAQ----ARLNPRYIFETFVIGDSNRFPHAAAVAVAEAPAKAYNPLFIYGDSGLGKTHLL 271 Query: 61 HAACAELSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAG 109 HA + V YV ++ T + ++ +D+I+ + Sbjct: 272 HAIGHYALKLYPNMRVKYVSSEEFTNDFINSIRDDRQQAFQRRYRDIDVLLVDDIQFLEN 331 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F +N + + G+ +++I+ DR P+QL+ L SR +WG + + P E Sbjct: 332 KERTQEEFFHTFNVLHD-GEKQIVISSDRSPKQLSALEDRLRSRFEWGLMTDITPPDLET 390 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L +A +P DV ++ ++R +R L L ++ + + + + Sbjct: 391 RIAILSKKAATERLPVPPDVLEYIATHIERNIRELEGALIRVAAFASLNKSHVDRTLAEI 450 Query: 230 ILK 232 +L+ Sbjct: 451 VLR 453 >UniRef50_A5EX07 Chromosomal replication initiator protein dnaA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EX07_DICNV Length = 442 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 17/241 (7%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLR----QEHSGYIYLWAREGAGRSHLLHAA 63 + L F +F G ++ A + + E + ++ G G+SHL+HAA Sbjct: 99 TFNSRLNPHYQFENFIVGKSNDNAYAAVHRVSKGLLSEDFNPLLIYGGTGLGKSHLMHAA 158 Query: 64 CAELSQRGD-AVGYVPLDKRTWF-----------VPEVLDGMEHLSLVCIDNIECIAGDE 111 L Q G V Y+ ++ T + + ++ + + ID+++ ++G Sbjct: 159 GNALCQNGKKRVMYLTAEEFTNDYINAIKNPKREMSDFINFYRNADALLIDDVQFLSGKN 218 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N + + K ++++T DR P+++ L SR G + P E ++ Sbjct: 219 RSQEEFFHTFNSLFDK-KRQIILTCDRFPKEIEGLADRLKSRFGSGLTVSVAPPDYETRI 277 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ +A F LP++V ++ +++ +R L L ++ +T+ + L Sbjct: 278 AILQSKAERLHFSLPKEVEEYIAEKVTSNIRDLEGALRKVYAYCEFNHEIITLDIARNAL 337 Query: 232 K 232 Sbjct: 338 N 338 >UniRef50_A8YW41 Chromosomal replication initiator protein dnaA n=10 Tax=Lactobacillus RepID=DNAA_LACH4 Length = 455 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 97/241 (40%), Gaps = 15/241 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLH 61 Q + L L + TF +F G+ + L A + ++++ G G++HL+ Sbjct: 111 KQFTKNLKLNEKYTFDNFVQGEGNKLAAGAALAVADSPGSFYNPLFIFGGVGLGKTHLMQ 170 Query: 62 AACAELS--QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGD 110 A ++ + V Y+ + + + L+ +D+I+ A Sbjct: 171 AIGHQMLAERPNAKVVYIQSETFVNDFINSIKNKTQDQFREKYRTCDLLLVDDIQFFAKK 230 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F + + K ++++T DR P ++ L SR WG ++ P E + Sbjct: 231 EGIQEEFFHTFETLYNDQK-QIVMTSDRLPTEIPDLSERLVSRFTWGLQVEITPPDLETR 289 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + L+ +A G + ++ ++ ++D +R L L ++ + + + + +E Sbjct: 290 IAILRRKAEAEGLVIDDNTLDYIASQVDTNIRELEGALVKVQAYATIERADINVNLAREA 349 Query: 231 L 231 L Sbjct: 350 L 350 >UniRef50_C1A3G6 Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3G6_GEMAT Length = 472 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 17/245 (6%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLL 60 Q + L TF F G ++ + AA Q ++++ G G++HL+ Sbjct: 108 VQQPRISTPLNPRYTFDQFVIGKSNDVAAAAAQAAAQAPGKVYNPLFIYGETGLGKTHLM 167 Query: 61 HAACAELSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAG 109 EL +R + YV ++ T + + + L+ +D+++ + G Sbjct: 168 QGIAHELLRRTPTLRLAYVGTEQFTNEFIGAIQAGAMGDFRRRFREIDLLLVDDVQFLKG 227 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F +N I E+G+ ++++T DRPP+++ L SR +WG + + E Sbjct: 228 KESTQEEFFHTFNAIYEAGR-QIVLTSDRPPKEIPGLESRLVSRFEWGMVANIDSPDLEH 286 Query: 170 KLQALQLRARLRGFE--LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 ++ L+ +A L E +P++V F+ + + +R L ++ +L + R +++ Sbjct: 287 RIAILKKKASLDHLELTIPDEVIEFIAQHVKSSVRELEGSIIKLLAYASLKHRDISVDLA 346 Query: 228 KEILK 232 +E L+ Sbjct: 347 REALR 351 >UniRef50_Q83NZ5 Chromosomal replication initiator protein dnaA n=2 Tax=Tropheryma whipplei RepID=DNAA_TROW8 Length = 478 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 96/233 (41%), Gaps = 15/233 (6%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL--S 68 TF +F G ++ L A + ++++ G G++HLLH+ Sbjct: 144 NPRFTFDNFVVGKSNELARAASISAAERPGKSFNPLFIYGDSGVGKTHLLHSIGNYAKFL 203 Query: 69 QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + YV + T + + + ++ +D+I+ + + + + F Sbjct: 204 FPSLRIKYVSSEDFTNDFINSISSGTSQKFQEKYRQIDILMVDDIQFLQKKQETQESFFH 263 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + S + +L+I+ D PP+QL + SR + G + +Q E ++ LQ + + Sbjct: 264 TFNSLHNSSR-QLVISSDLPPKQLMGFEDRMRSRFECGLVCDIQKPDLETRIAILQKKCQ 322 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 E+ ++ ++ +R L L ++ + + ++ + +++L+ Sbjct: 323 NEKKEVSMEILTYIASCFSSSVRELEGALLRIFALASFNKEEINMTLAQKVLE 375 >UniRef50_A7BAR9 Chromosomal replication initiator protein dnaA n=2 Tax=Actinomyces RepID=A7BAR9_9ACTO Length = 476 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 20/242 (8%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P +L TF +F G ++ A + ++++ G G++HLL A Sbjct: 128 PTHLNPKFTFDTFVIGPSNRFAHAAALAASETPGTAFNPLFIYGDSGLGKTHLLQAIGHN 187 Query: 67 LSQ--RGDAVGYVPLDKRTW--------------FVPEVLDGMEHLSLVCIDNIECIAGD 110 V YV ++ T V L ++ ID+I+ I Sbjct: 188 ALSMMPHLKVRYVNSEEFTNEFINAIRLNKTDNSQVEAFHRRYRELDILLIDDIQFIGDK 247 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E F +N + + K ++++T D PP QL + SR G + +QP E + Sbjct: 248 EQTVEGFFHTFNALHSANK-QIVLTSDLPPAQLKGFEDRMRSRFSSGLLVDVQPPDLETR 306 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + L +A G E+ +V ++ R+ +R L L ++ + Q ++ + + + Sbjct: 307 IAILHKKADAEGLEVTPEVFEYVASRISSNIRELEGALVRIGAWASLYQERIDLNLAQMM 366 Query: 231 LK 232 LK Sbjct: 367 LK 368 >UniRef50_Q0AK27 Chromosomal replication initiator protein dnaA n=28 Tax=cellular organisms RepID=DNAA_NITEC Length = 459 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 15/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P L TF +F G + L A + + ++++ G G++HL+HA Sbjct: 121 PSRLNPAFTFDAFVTGKANQLARAGAIQVAERPGIAYNPLFIYGGVGLGKTHLMHAVGNY 180 Query: 67 LSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + G + YV +K V + L L+ +D+++ +G + Sbjct: 181 VMELDAGAKIRYVHAEKYVSDVVSAYQHKSFDKFKLYYHSLDLLLVDDVQFFSGKNRTQE 240 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N ++E+ K +++IT D P++++ L SR WG ++P E ++ L Sbjct: 241 EFFYAFNALIEAHK-QVIITSDCYPKEISGLEERLVSRFGWGLTVAIEPPELEMRVAILL 299 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A + EL E F+ K + +R L L ++ S +++ KE LK Sbjct: 300 KKAFIEKIELDESTAFFIAKYIRSNVRELEGALKRVLAYSRFTGHPISLDLAKEALK 356 >UniRef50_C2M1U5 Chromosomal replication initiator protein dnaA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1U5_CAPGI Length = 478 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 104/237 (43%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACA 65 L ++ F +F G+++ L + + + ++++ G G++HL HA Sbjct: 138 DSQLNPNKNFDTFIEGESNRLARSAGKAITERPGGTSFNPLFIFGGVGLGKTHLAHAIGN 197 Query: 66 ELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 E+ ++ + Y+ + T + + + + ++ IDN++ A + Sbjct: 198 EIQEKHPKKRILYIEAEDFTKQYSVAAKNNNRTDFIHFYQQIDVLIIDNVQFFASKPGTQ 257 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK +L++T D+ P + L SR WG +LQ + + + L Sbjct: 258 DVFFQIFNHLHQNGK-QLILTSDKAPVDIQDVEQRLLSRFKWGLSAELQAPDYQMRKRIL 316 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 Q G E+ E++ ++ + + +R L L ++ ++++T+ K+ + Sbjct: 317 QAILYRDGVEMSEEIVDYIAQNVKTNIRELEGVNTSLMAEALFNKKEITLDLAKKAV 373 >UniRef50_Q73IZ0 Chromosomal replication initiator protein dnaA n=13 Tax=Rickettsiaceae RepID=DNAA_WOLPM Length = 460 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 19/240 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQE-----HSGYIYLWAREGAGRSHLLHAA 63 L L TF +F G + L + + S ++L+ G G++HL+HA Sbjct: 120 LGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPILGSNPLFLYGGVGLGKTHLMHAI 179 Query: 64 CAELSQR---GDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDE 111 + V Y+ +K + + + ++ +D+++ I+G + Sbjct: 180 AWHIVNSPSAKRKVVYLSAEKFMYQYITALRSKDIMLFKEQFRSVDVLMVDDVQFISGKD 239 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + F +N +++ K +L+I+ DR P L+ + SRL WG + + + E +L Sbjct: 240 STQEEFFHTFNALIDQNK-QLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRL 298 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LQ + +P+DV FL + + +R L L+++ S+ R +T+ E L Sbjct: 299 GILQAKVEQMNMYVPKDVLEFLARNIKSNIRELEGALNKVTHTSLI-GRSMTVESASETL 357 >UniRef50_D2RCN9 Chromosomal replication initiator protein DnaA n=4 Tax=Bifidobacteriaceae RepID=D2RCN9_GARVA Length = 539 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 M Q +L TF +F PGD++ + + + + ++ G G++ Sbjct: 181 MPVSVQRDAITHLNTCATFDTFVPGDSNRFARTVALAVAEGSGRDFNPLCIYGGSGLGKT 240 Query: 58 HLLHAACAELSQRG--DAVGYVPLDKRTWFVPEVLD--------------GMEHLSLVCI 101 HLL+A + V YV ++ T E L + ++ I Sbjct: 241 HLLNAIGNYALVKDSSLKVRYVTSEEFTNEFIEALQTPNQSQGQIADFNRRYREVDVLLI 300 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 D+I+ + G E F +N + ++ K R++I D P+ L L SR + G Sbjct: 301 DDIQFLGGKEATLEQFFHTFNSLYQANK-RIVIASDVAPKNLKGFEARLISRFESGLTVD 359 Query: 162 LQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 ++P E ++ L++ A + +P DV + +R +R L L ++ + + + Sbjct: 360 IKPPDLETRIAILRMMASMNHCNVPSDVLDLIAERFTENIRELEGALTRVTAVASLSNQP 419 Query: 222 LTIPFVKEILK 232 ++ ++ L+ Sbjct: 420 VSKALAEQALQ 430 >UniRef50_C1SM39 Chromosomal replication initiator protein dnaA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM39_9BACT Length = 446 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAEL 67 L D TFA+F G ++ + + + ++++ G G++HL+HA + Sbjct: 106 SGLNRDYTFANFVAGGSNEFSFSACEAVSEGQFMQYNPLFIYGGSGLGKTHLMHAVGNRI 165 Query: 68 SQRGDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 ++ V Y+ + T + E + ++ D+++ ++G + Sbjct: 166 LEKFPKMKVLYITSETFTNDMINSLRTRKMEEFQARYRTIDVLLFDDVQFLSGKQRSTEE 225 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N + ++ K +++IT D+ P ++ L SR WG I +QP S E+K L Sbjct: 226 FFNTFNALYDNQK-QIIITSDKTPAEIPDMEDRLKSRFAWGLIADIQPPSTEEKTAILMK 284 Query: 177 RARLRGFELPEDVGRFLLKR-LDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RA G +LP +V F+ + + +R L L +L + +R LTI K+ L Sbjct: 285 RAEFMGLKLPGEVALFIAENMITENVRELMGALVRLSAFASFHKRGLTIDLAKDAL 340 >UniRef50_D2RMT3 Chromosomal replication initiator protein DnaA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RMT3_ACIFE Length = 462 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 100/243 (41%), Gaps = 16/243 (6%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLL 60 PAQ +L TF +F G ++ + ++L++ G G++HL+ Sbjct: 117 PAQ-EFDSHLSPKYTFDNFIRGKSNEEAFNFSMGVANAPAKSYNPLFLYSDPGLGKTHLM 175 Query: 61 HAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAG 109 +A + ++ + Y + T + + ++ ++ ID+I+ + Sbjct: 176 NAIGNYIHKKFPQMKILYTSSETFTNELIGAIQHNTNEAFRNKYRNIDVLLIDDIQFLRK 235 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 E + F + + ++ K +++I+ DRPP++L+ L SR G I ++ E Sbjct: 236 KESTQEEFFHTFEALKQADK-QIIISSDRPPKELDTLEERLTSRFMQGLIIEINHPDFET 294 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 + L+ A E P +V + + + +R L ++ + + +T+ ++ Sbjct: 295 RSAILRSMAEKDHLEFPLEVIQLIATNVKTNIRELEGAYTKVHAFANLNHQPVTMELARK 354 Query: 230 ILK 232 LK Sbjct: 355 ALK 357 >UniRef50_C7H083 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H083_9FIRM Length = 455 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 18/236 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F GDN+ A+ + +L+ G G++HL+HA + + Sbjct: 118 LNPKYTFDNFVVGDNNRHAHAVALSIANSEISEYNPFFLYGGPGLGKTHLMHAIGMTIMK 177 Query: 70 RGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YVP + T + E + + ++ ID+I+ + G E + F Sbjct: 178 NFPYKKVLYVPAETFTTDLINSIRKSSQEEFKNKYRMVDVLLIDDIQFMQGKESTQEEFF 237 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + GK +++I+ DR P LN L SR ++P + E ++ LQ + Sbjct: 238 HTFNSLTRLGK-QIVISSDRSPNHLNKLDERLRSRFMQNVTTDIKPANFETRVAILQKKC 296 Query: 179 RLRGFELP---EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + FE+ +V + +D +R L L +L S K+TI + K+ L Sbjct: 297 EIENFEVDANLNEVINLIAHNIDNNIRALEGALTKLISFSRLLNEKITIDYAKKNL 352 >UniRef50_Q0SAG7 Chromosomal replication initiator protein dnaA n=62 Tax=root RepID=DNAA_RHOSR Length = 528 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G ++ A + + +++W G G++HLLHAA Sbjct: 188 SLNAKYTFDTFVIGSSNRFAHAAAVAIAEAPARAYNPLFVWGASGLGKTHLLHAAGHYAQ 247 Query: 69 Q--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + G V YV ++ T ++ +D+I+ I G E + Sbjct: 248 RLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRRYRETDVLLVDDIQFIEGKEGIQEEF 307 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + K +++++ DRPP+QL L +R +WG I +QP E ++ L + Sbjct: 308 FHTFNTLHNANK-QIVVSSDRPPKQLATLEERLRTRFEWGLITDVQPPELETRIAILSKK 366 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 AR+ E+P+DV + R++R +R L L ++ + ++ L + + +L+ Sbjct: 367 ARMDRLEVPDDVLELIASRIERNIRELEGALIRVTAFASLNRQPLDLTLAEVVLR 421 >UniRef50_Q2S6M2 Chromosomal replication initiator protein dnaA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S6M2_SALRD Length = 524 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACA 65 L D TF F G + L + + + + ++ G G++HL+ A Sbjct: 182 DNQLNDSYTFDRFIEGACNRLARSAAHSIATDPGETSFNPFLVYGGVGLGKTHLIQAIGN 241 Query: 66 ELSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 ++ R V YV ++ T + E + ++ +D+++ G E + Sbjct: 242 HVAARDASKTVFYVSSERFTTEFVQSIQENQIGEFSTFYRQVDVLIVDDVQFFGGKEKTQ 301 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++G +++++ DRPPR+++ L SR WG L+P + ++ L Sbjct: 302 EEFFHIFNALRQAG-NQIVLSADRPPREIDGLEERLLSRFQWGLSADLKPPGLDTRISIL 360 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +A G +L +DV F+ + ++ +R L L +L + Q +T+ KE+L Sbjct: 361 RRKAEDDGIDLDDDVVEFIAQSIESNIRELEGALIRLLAHATLHQLDITLDLAKEVL 417 >UniRef50_Q4JYF7 Chromosomal replication initiator protein dnaA n=4 Tax=Corynebacterium RepID=DNAA_CORJK Length = 583 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSHLLHAACAEL-- 67 L + TF +F G +++ AA + + +++W G G++HLLHA Sbjct: 243 LNKNYTFENFVVGSSNNFAAAACRAVAEAPAKAYNPLFIWGESGLGKTHLLHAIGHYAKE 302 Query: 68 SQRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 Q V YV ++ T +L ++ +D+I+ + E + F Sbjct: 303 LQPNMRVKYVSSEELTNDFINSIANDTRESFKRRYRNLDMLIVDDIQFLQNKESTQEEFF 362 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + ++ K +++++ DRPPRQL L +R + G I +Q E ++ L +A Sbjct: 363 HTFNALHQANK-QIVLSSDRPPRQLTTLEDRLRTRFEGGLITDVQTPDLETRIAILTKKA 421 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +LPEDV + R ++ +R L L ++ + LT+ + L+ Sbjct: 422 ESDNVQLPEDVKVLIASRYEKSIRELDGALIRVTAYCALSHEPLTVETAEIALR 475 >UniRef50_UPI0001C36FC2 chromosomal replication initiation protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FC2 Length = 457 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 101/238 (42%), Gaps = 20/238 (8%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQ-------EHSGYIYLWAREGAGRSHLLHAACAE 66 D TF +F G ++ A + + ++++ G G++HL+ A E Sbjct: 113 NYDYTFDTFIEGRSNEFALACSKSVAKNCGEKAVPDYNPLFIYGPSGMGKTHLITAIANE 172 Query: 67 LSQRGD--AVGYVPLDKR----------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 + + + YV + T + + + ++ ID+I+ +G E + Sbjct: 173 VRKNHPDFNIVYVTSEAFGGELINALNNTGNIDDFHAKYRNADILLIDDIQFFSGKERMQ 232 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F + + + G+ +++IT D+PP++L L +R + G I + E +L + Sbjct: 233 EEFFHTFYTLHQEGR-QIVITSDKPPKELLTLEERLRTRFEGGLIADISAPDYETRLAII 291 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ L ++P +V F+ RL +R L + +L + A +TI + +++ Sbjct: 292 NRKSELLELKMPSEVAEFMANRLKSNIRQLEGAVVRLKALNHFAGSPITISMAQSVIR 349 >UniRef50_C7JHC5 Chromosomal replication initiator protein dnaA n=9 Tax=Alphaproteobacteria RepID=C7JHC5_ACEP3 Length = 477 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 111/237 (46%), Gaps = 15/237 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 L L TF +F G + A + ++ S ++L+ G G++HL+HA Sbjct: 138 LVTALDSRFTFDTFVVGKPNEFAYACARRVAEKPSSVGFNPLFLYGGVGLGKTHLMHAIG 197 Query: 65 AELSQRGD-AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 AEL Q G+ +V Y+ +K E + + + ++ ID+++ + G + + Sbjct: 198 AELIQSGNVSVAYMSAEKFMYRFIAAIRSQSTIEFKEQLRSVDVLMIDDLQFLIGKDNTQ 257 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N ++++G+ +++++ D+ P L+ L +RL G + + + E ++ L Sbjct: 258 EEFFHTFNALVDAGR-QIVVSADKSPSDLSGLEDRLRTRLGCGMVADIHATTFELRISIL 316 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +A G +P V FL ++ +R L L++L + R +T+ +E+L Sbjct: 317 ESKAAASGVVVPGKVLEFLAHKITSNVRELEGALNRLIAHANLFGRPVTLEATQEVL 373 >UniRef50_D0WL10 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WL10_9ACTO Length = 591 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 + TF +F GDN+ A + + ++L++ G G++HL+HA Sbjct: 247 RINPRYTFDNFVIGDNNRFATATSLAVAESPGTTYNPLFLYSDSGMGKTHLMHAIGNYAL 306 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T E + + ++ ID+I+ I G + Sbjct: 307 NLFPSIKVRYVSAEEFTNAFINSVRDGHQAEFKNQFRTVDILLIDDIQFIGGRDSTVEEF 366 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + S K +++IT D P LN + SR + G + + E ++ L+ + Sbjct: 367 FHTFNALTNSNK-QIVITSDVSPNLLNGFEERMLSRFNSGVTANIDRPNLETRIAILEKK 425 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A GF +P +V ++ + +R + L ++ + +++ +++ + ILK Sbjct: 426 AHSDGFTVPREVNEYIATHMLTNVREMEGALRRVTAFADLSKQTISLGLAEMILK 480 >UniRef50_Q7VH57 Chromosomal replication initiator protein dnaA n=6 Tax=Helicobacteraceae RepID=DNAA_HELHP Length = 456 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 99/234 (42%), Gaps = 13/234 (5%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAEL 67 L L TF +F G ++ + ++ Q+ + L+ + G G++HLL+A ++ Sbjct: 116 LSLNPFYTFENFVVGKSNEYAYTIAKLVLQQQASAYNPVLLYGKSGLGKTHLLNAIGNDV 175 Query: 68 SQRGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 ++ V YV + + D + ID+++ G E + + Sbjct: 176 KEKNKNVLYVTSEDFLNDYMDKIKRKTMDSFRDKYRKCDYLLIDDVQFFGGKEGIQEELL 235 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + S K ++++T D+PP+++ L +R +WG + ++ E K+ ++ + Sbjct: 236 HTFNTLHNSQK-QIVMTSDKPPKEIKGLEERLRTRFEWGAMAEITNPELETKIAIIKSKC 294 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + L +V ++ + +R + L ++ + ++ K +LK Sbjct: 295 EVNRIVLENEVIDYIASNIYGNIRQIEGILSTINAHINLSPESSSLKIAKNVLK 348 >UniRef50_Q5P4P0 Chromosomal replication initiator protein dnaA n=34 Tax=Proteobacteria RepID=DNAA_AZOSE Length = 481 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L A + Q ++++ G G++HL+HA + Sbjct: 145 RLNADFTFDTLVTGRANDLARAAAMQVAQNPGTSYNPLFVYGGVGLGKTHLVHAIGNAVY 204 Query: 69 QRGDAVG--YVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + YV ++ L L+ ID+I+ + Sbjct: 205 RHNPRAVIRYVHVEDYYADVVRAYQQKSFDAFKRYYRSLDLLLIDDIQFFNNKNRTQEEF 264 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K +++IT D P+ + L SR DWG +++P E ++ LQ + Sbjct: 265 FHAFNALTEARK-QIVITCDTYPKDIQGLEDRLISRFDWGLTVQIEPPELEMRVAILQKK 323 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +L +DV + K L +R L L+++ + R +T+ K+ LK Sbjct: 324 AEALRVDLHDDVAFLIAKNLRSNVRELEGALNKVVAFARFHGRGITLEVAKDALK 378 >UniRef50_Q1GC43 Chromosomal replication initiator protein dnaA n=23 Tax=Lactobacillaceae RepID=DNAA_LACDA Length = 454 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 95/236 (40%), Gaps = 15/236 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L L + TF +F G+ + L A + ++++ G G++HL+ A + Sbjct: 115 DLRLNEKYTFENFIQGEGNKLAAGAALAVADNPGTFYNPLFIFGGVGLGKTHLMQAIGHQ 174 Query: 67 LS--QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + + V Y+ + + + L+ +D+I+ A E + Sbjct: 175 MLAERPDAKVVYIQSETFVNDFINSIKNKTQDKFREKYRTADLLLVDDIQFFAKKEGIQE 234 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F + + K ++++T DR P ++ L SR WG ++ P E ++ L+ Sbjct: 235 EFFHTFETLYNDQK-QIVMTSDRLPTEIPDLSERLVSRFAWGLQVEITPPDLETRIAILR 293 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A G E+ E ++ ++D +R L L ++ + ++ + I + L Sbjct: 294 KKAESEGLEIDESTLDYVASQVDTNIRELEGALVKVQAQATIQKQDINIGLARSAL 349 >UniRef50_A5VHF3 Chromosomal replication initiator protein dnaA n=11 Tax=Lactobacillus RepID=DNAA_LACRD Length = 440 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 15/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L F +F G+ + + A + + ++++ G G++HL+ A Sbjct: 102 DTPLNPHYNFGTFVVGEGNKMAHAAAFAVAESPGSLYNPLFIYGGVGLGKTHLMEAIGNH 161 Query: 67 LSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + Q V YV + T ++ + +L L+ ID+I+ +A E ++ Sbjct: 162 MLQVNPNSRVKYVTSEDFTNDYINAIRNNTTEQLREEYRNLDLLLIDDIQFLANKEGTQL 221 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F+ +N + + K ++++T DR P ++ L SR WG ++ P E ++ L+ Sbjct: 222 EFFNTFNALHDR-KKQIVMTSDRIPNEIPELQDRLVSRFRWGLTVEITPPDLETRIAILR 280 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++ D ++ ++D +R L L ++ + + ++T + LK Sbjct: 281 SKVEEDHIDIGNDTLNYIAGQIDTNIRELEGALTKVQAFANLSGERITPSLASQALK 337 >UniRef50_UPI0001BCD63C chromosomal replication initiation protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD63C Length = 478 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 32/253 (12%) Query: 2 NTPAQLSLPLY----------------LPDDETFASFWPGDNSSLLAALQNVLRQEHS-- 43 +TPAQ SLPL L TF +F G ++ A+ + Sbjct: 114 DTPAQGSLPLTPTPSDTHAAAPDDATTLNPKYTFDAFVTGRSNQFPYAMAKAVADAPGLP 173 Query: 44 --GYIYLWAREGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVL 90 ++++ G G++HL+HA ++ V Y+ T + Sbjct: 174 SHNPLFIYGGVGLGKTHLMHAVGHKILADHPDRRVLYIASTDFTNEFIRSIREKNMDAFR 233 Query: 91 DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDL 150 + + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + L Sbjct: 234 EKYYSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVKGLEDRL 292 Query: 151 ASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ 210 SR G +QP E ++ LQ +A+ ++PEDV ++ R+D +R L L + Sbjct: 293 ISRFAGGAPVDIQPPEFETRVAILQKKAQSEEVDIPEDVVTYIASRVDSNIRELEGALTR 352 Query: 211 LDRASITAQRKLT 223 L + + T + + Sbjct: 353 LIKYASTMRMPID 365 >UniRef50_UPI000185BFFA chromosomal replication initiator protein DnaA n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BFFA Length = 582 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 18/246 (7%) Query: 3 TPAQLSLPL---YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGR 56 TP ++S+P L + TF +F G + AA + + +++ G G+ Sbjct: 230 TPTEMSMPFEEPTLNPNYTFETFVIGPQNKFAAAAAVAVAESPGRTYNPLFISGGSGLGK 289 Query: 57 SHLLHAACAELSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIE 105 +HLLH V YV ++ T L ++ ID+I+ Sbjct: 290 THLLHGIGHYAKHLYPNLRVRYVSSEEFTNDFINSVRDDAQESFKRRYRDLDMLIIDDIQ 349 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + G E + F +N + +S +++++ DRPPR+L L +R WG LQ Sbjct: 350 FLEGKEGTQEEFFHTFNALHQSNH-QIVLSSDRPPRELKTLEDRLRTRFQWGLNPDLQYP 408 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 E ++ L +A+L +P +V +++ + +R L L Q+ + +T+ Sbjct: 409 DLETRIAILSKKAQLSDLAVPHNVLQYIAENTSSSIRELEGRLLQISAHASMIHEPVTLK 468 Query: 226 FVKEIL 231 F +EIL Sbjct: 469 FAQEIL 474 >UniRef50_B8DV06 Chromosomal replication initiator protein dnaA n=17 Tax=Bifidobacterium RepID=DNAA_BIFA0 Length = 583 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 +L ++TF +F GD++ + + + + ++ G G++HLLHA Sbjct: 236 HLNSNDTFDTFIQGDSNRFARTVALAVAEGSGRDYNPLCIYGGSGLGKTHLLHAIGNYAV 295 Query: 69 QRG---DAVGYVPLDKRTWFVPE----------------VLDGMEHLSLVCIDNIECIAG 109 Q V YV ++ T E + ++ ID+I+ + G Sbjct: 296 QNQKPRPRVLYVTSEEFTNDFIESIRTSGQDNEDPAMEKFYRKYREVDVLLIDDIQFLGG 355 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 F +N + ++ K R++I D PP L L SR + G ++P + E Sbjct: 356 KRGILEQFFHTFNSLYQANK-RIVIASDVPPHNLEDFEDRLISRFEQGITVDVKPPNLET 414 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ L++ A +P DV + +R +R L L ++ + + +T + Sbjct: 415 RIAILRMLAEQNHIRVPNDVLNLIAERFANNVRELEGALKRVIAMASLNHQPVTRALTER 474 Query: 230 ILK 232 L+ Sbjct: 475 TLQ 477 >UniRef50_A6NQD8 Chromosomal replication initiator protein dnaA n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQD8_9BACE Length = 426 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 106/232 (45%), Gaps = 15/232 (6%) Query: 15 DDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACA--ELSQ 69 +D TF F G ++ A + + ++++ G G++HLL+A ++ Sbjct: 89 EDYTFERFVVGSSNKFAHAAALSVAENPGKSYNPLFIYGESGLGKTHLLYAIAHKIHATR 148 Query: 70 RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ D T + E + + +D+++ IAG E + +F Sbjct: 149 PDFRVVYIKGDAFTNELIQAIREGSNQEFREKFRSADVFLMDDVQFIAGRESSQEEMFHT 208 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + E+G+ +++ T DRPP+++ L +R +WG ++P E ++ ++ +A Sbjct: 209 FNTLYEAGR-QIVFTADRPPKEMLRLDDRLKTRFEWGLPVDIKPPDYETRVAIIKNKAIR 267 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 RG ELPE V +++ + + +R + T++++ + + V ++ Sbjct: 268 RGMELPEPVLQYIAENITSNVRQIEGTVNKILAFQELMGESVDVDTVTRAVR 319 >UniRef50_Q5L9D0 Chromosomal replication initiator protein dnaA n=39 Tax=Bacteroidales RepID=DNAA_BACFN Length = 476 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 107/247 (43%), Gaps = 16/247 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGR 56 + PA L +L + F +F G ++ L ++ + + + ++L G G+ Sbjct: 120 LRAPAVQDLDPHLNPNYNFETFIEGYSNKLSRSVAEAVAENPAKTVFNPLFLHGASGVGK 179 Query: 57 SHLLHAACAELSQ--RGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIE 105 +HL +A + + V YV + ++ + + ++ ID+I+ Sbjct: 180 THLANAIGTRIKELYPDKRVLYVSAHLFQVQYTDSVRNNTTNDFINFYQTIDVLIIDDIQ 239 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 AG + F ++N + ++GK +L++T DR P L L +R WG + +L+ Sbjct: 240 EFAGVTKTQNTFFHIFNHLHQNGK-QLILTSDRAPVLLQGMEERLLTRFKWGMVAELEKP 298 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 + E + L+ + G + P +V ++ + ++ +R L + + S +++ + Sbjct: 299 TVELRKNILRNKIHRDGLQFPSEVIDYIAENVNESVRDLEGIVISIMAHSTIYNKEIDLD 358 Query: 226 FVKEILK 232 + I++ Sbjct: 359 LAQRIVR 365 >UniRef50_B0S416 Chromosomal replication initiator protein dnaA n=2 Tax=Finegoldia magna RepID=B0S416_FINM2 Length = 485 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 19/239 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G N+ L A + Q +++ + G G++HL+HA E+ Sbjct: 144 NLIAKYKFDTFVKGKNNELALAAALAVAQNPATAYNPLFIHGKAGLGKTHLMHAIAHEIL 203 Query: 69 QRGD--AVGYVPLDKRTWFV------------PEVLDGMEHLSLVCIDNIECIAGDELWE 114 + V Y + T + + ++ ++ ID+I+ IAG + + Sbjct: 204 KNNPKARVIYTTSESFTNELISSIGDKSTKKNSQFRQKYRNIDVLLIDDIQFIAGKQGTQ 263 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + K +++++ DRPP+++ L SR +WG + +QP E ++ + Sbjct: 264 EEFFHTFNELYNHNK-QIILSSDRPPKEIKTLEERLVSRFEWGLMADIQPPDYETRVAIV 322 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTL-DQLDRASITAQRKLTIPFVKEILK 232 LP ++ ++ + +R L + + + + ++ +T+ K +LK Sbjct: 323 NEYLDRNNTSLPPEIIDYIAMNVKSNIRELEGAVMNVVGQKTLIGDGNITLDLAKNVLK 381 >UniRef50_B2V628 Chromosomal replication initiator protein dnaA n=5 Tax=Aquificales RepID=B2V628_SULSY Length = 459 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 15/236 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L L TF + G+N+ + + + ++++ G G++HLLH + Sbjct: 120 LSLNPKYTFDNLIVGNNNKVAFQACLAVTENLGKIYNPLFIYGDVGLGKTHLLHGTAYHV 179 Query: 68 SQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + + Y D + E + L+ ID+I+ + G E ++ Sbjct: 180 LAKSSSAKIIYTTADTFASELFSYLEKGMILEFRKKYREVDLLLIDDIQFLVGKERTQIE 239 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 + ++N + GK +++++ D+PP +LN L SR G I ++ E K+ Sbjct: 240 FYHIFNVLYSLGK-QIILSSDQPPSKLNGIEKRLISRFSSGLIVEITKPDLETKINITLK 298 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + E DV F+ K ++ +R L ++ +L S R +T+ + +LK Sbjct: 299 KMKELNVEFSRDVVLFIAKTVNTSVRELEGSIKRLKAYSEIMGRPITLDVARTVLK 354 >UniRef50_UPI0001BCD9C2 chromosomal replication initiator protein DnaA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD9C2 Length = 491 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G ++ A + + + G G++HLLHA + Sbjct: 149 RLNPRYLFENFVIGSSNRFAHAAAVAAAEAPGKAYNPLVIHGESGLGKTHLLHAIGHYVL 208 Query: 69 QRGD--AVGYVPLDKRTWFVPEVL---------DGMEHLSLVCIDNIECIAGDELWEMAI 117 V YV ++ T V + + ++ +D+I+ I G E + Sbjct: 209 GLYPSSRVRYVNTEEFTNDVINAIGERRTGALKRKYREIDVLLVDDIQFIEGKEATQEEF 268 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + K ++++T DRPP+ L L +R +WG + P E ++ L+ + Sbjct: 269 FHTFNALHNENK-QIVMTSDRPPKNLKTLEERLRNRFEWGLTTDVTPPELETRIAILRKK 327 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G +P DV F+ ++ +R L L + + + + + +LK Sbjct: 328 ASSDGLTVPADVLEFIASKVQSNIRELEGALIRATAFANLQGTTVDLNLAQIVLK 382 >UniRef50_C4V1P4 Chromosomal replication initiator protein dnaA n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1P4_9FIRM Length = 473 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 30/250 (12%) Query: 3 TPAQLSLPLY--------------LPDDETFASFWPGDNSSLLAALQNVLRQEHS----G 44 PAQ SLPL L TF +F G ++ A+ + Sbjct: 112 APAQGSLPLTPPETHAAAPDDTTTLNPKYTFEAFVTGRSNQFPYAMAKAVADAPGLPSHN 171 Query: 45 YIYLWAREGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGM 93 ++++ G G++HL+HA ++ V Y+ T + + Sbjct: 172 PLFIYGGVGLGKTHLMHAVGHKILADDPKKRVLYIASTDFTNEFIRSIREKNMDAFREKY 231 Query: 94 EHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASR 153 + ++ ID+I+ AG E + F +N++ ++G +++++T DR P+ + L SR Sbjct: 232 YSIDVLLIDDIQFFAGQEQTQTEFFQTFNKLRDNG-SQIILTSDRQPQDVKGLEDRLISR 290 Query: 154 LDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDR 213 G +QP E ++ LQ +A+ ++P DV ++ R+D +R L L +L + Sbjct: 291 FAGGAPVDIQPPEFETRVAILQKKAQSEDVDIPADVVTYIASRVDSNIRELEGALTRLIK 350 Query: 214 ASITAQRKLT 223 + T + + Sbjct: 351 YASTMRMPID 360 >UniRef50_C7NID0 Chromosomal replication initiator protein dnaA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NID0_KYTSD Length = 506 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELS- 68 L TF +F G ++ A + + ++++ G G++HLLHA Sbjct: 164 LNHKYTFDTFVLGSSNRFAHAAATAVAEAPARAYNPLFIYGGSGLGKTHLLHAIGHYART 223 Query: 69 -QRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV ++ T + ++ ID+I+ + G E F Sbjct: 224 LDSSVRVKYVNSEEFTNQFINAVSAGQANAFQRQYRDVDVLLIDDIQFLQGKEQTMEEFF 283 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + S K +++IT D+PP++L+ + SR +WG + +QP E ++ L+ +A Sbjct: 284 HTFNTLHNSEK-QIVITSDQPPKKLSGFAERMRSRFEWGLLTDVQPPDLETRIAILRRKA 342 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P+DV + ++ +R L L ++ + + L + +LK Sbjct: 343 AADKLDIPDDVLHLIASKISSNIRELEGALTRVTAFASLSGSPLDEYLARTVLK 396 >UniRef50_B0MRG6 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRG6_9FIRM Length = 467 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 16/231 (6%) Query: 17 ETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQRGD- 72 TF +F GDN+ L A + QE +Y+++ G G++HLL A +E+ + Sbjct: 132 HTFDTFIVGDNNKLAYAACKAVVQEPSTRYNPLYIYSEPGLGKTHLLSAVKSEMEKLHPD 191 Query: 73 -AVGYVPLDKRTWF----------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 + Y D T + L+ ID+I+ +A + +F + Sbjct: 192 MNIIYTTADTFTDDYVSNLRTKSNLEAFKQKYRSCDLLLIDDIQFMANKSETQQELFHTF 251 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + K +++ T DRPP++LN L SR + G + + P E ++ ++ +A L Sbjct: 252 NSLYNQNK-QIIFTSDRPPKELNGIEQRLISRFEQGLLADIAPPEYETRIAIIKRKAELY 310 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP+ + FL +L +R L + +++ ++ T+ +++++ Sbjct: 311 GMNLPDSIVDFLADKLKTNIRQLEGAITKINALTLVTGSTPTLNMAQQVVR 361 >UniRef50_Q03D55 Chromosomal replication initiator protein dnaA n=45 Tax=Bacilli RepID=DNAA_LACC3 Length = 449 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 92/235 (39%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 +L TF F G + + A + + ++++ G G++HL+ A + Sbjct: 110 HLNPKYTFDHFVIGKGNQMAHAAALAVAEAPGTTYNPLFIYGGVGLGKTHLMQAIGNLVL 169 Query: 69 QRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + YV + + ++ L+ +D+I+ E + Sbjct: 170 GNNPAANIKYVTSENFANDFINSIQTKQQEQFRQEYRNVDLLLVDDIQFFGDKEATQEEF 229 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K ++++T DR P ++ L SR + G + P E ++ L+ + Sbjct: 230 FHTFNTLYENMK-QIVLTSDRLPNEIPKLQERLVSRFNKGLSVDVTPPDLETRIAILRNK 288 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A +P+D ++ +++ +R L L ++ S +T + LK Sbjct: 289 ADAEDLSIPDDTLSYIAGQIESNVRDLEGALVRVQAFSTMKNEDITTSLAADALK 343 >UniRef50_A1VX79 Chromosomal replication initiator protein dnaA n=16 Tax=Campylobacter RepID=DNAA_CAMJJ Length = 440 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 93/234 (39%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH-----SGYIYLWAREGAGRSHLLHAACAEL 67 L TF SF GD++ + + I+++ G G++HLL A Sbjct: 101 LNPSFTFDSFVVGDSNKYAYGACKAITHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS 160 Query: 68 SQRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + G V Y + + + + + ++ ID+++ + + + F Sbjct: 161 LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFF 220 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 ++N +++ ++++T D PP L L SR G I + P + K+ ++ + Sbjct: 221 FIFNE-IKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIRKKC 279 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L D+ ++ L +R + + L+ + +++T+ K ++K Sbjct: 280 EFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMK 333 >UniRef50_B0MSW1 Chromosomal replication initiator protein dnaA n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSW1_9BACT Length = 469 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 121/242 (50%), Gaps = 16/242 (6%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHA 62 + + L + TFA+F G+ + L + + + +Y++ G G++H++ + Sbjct: 127 IVIDPQLNPNYTFATFIEGECNRLARSAGMAVAVDPGHTPFNPLYIYGNSGLGKTHIVQS 186 Query: 63 ACAELSQRGDA--VGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDE 111 E+ QR V YV ++K +P+ + + + ++ ID+I+ + G Sbjct: 187 IGHEVRQRHPELQVLYVSMNKFQAQFQTAYKNGEIPDFIHFYQMIDVLIIDDIQELTGKT 246 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + A F+++N + +GK +L++T D+PP +L L +R WG +L + K+ Sbjct: 247 GTQNAFFNIFNHLQLAGK-QLILTSDKPPVELKDIEQRLLTRFKWGLSTQLNTPDYDTKV 305 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + ++++A+ G +L +++ R+L + +R + L L ++ +K+++ VKEIL Sbjct: 306 KIIRIKAQKLGLQLTDEIVRYLADNISANVREIEGALSALVANTVYMGKKVSLSLVKEIL 365 Query: 232 KL 233 K+ Sbjct: 366 KV 367 >UniRef50_C1CXJ1 Chromosomal replication initiator protein dnaA n=16 Tax=Bacteria RepID=DNAA_DEIDV Length = 459 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 105/234 (44%), Gaps = 15/234 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G N++L A + + ++++ G G++HL+HA ++ Sbjct: 116 TLNPKYTFENFVVGPNNNLAHAAALAVAESPGKAYNPLFIYGDVGLGKTHLMHAVGHYIA 175 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 +R + YV + T + + + + L+ +D+I+ +AG E + Sbjct: 176 ERFPEKRIEYVSTETFTNELINAIREDKTTQFRNRYRSVDLLLVDDIQFLAGKERTQEEF 235 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + E+ K +++++ DRPP+ + L SR +WG I +Q E ++ L++ Sbjct: 236 FHTFNALYENHK-QIILSSDRPPKDIQTLEGRLRSRFEWGLITDIQSPEFETRVAILKMN 294 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A ++P++V + +++ +R L L ++ S + + L Sbjct: 295 AEHNRIDIPQEVLELIARQVTTNIRELEGALMRVVAFSSLNNVPFSRAVASKAL 348 >UniRef50_B3T283 Putative bacterial DnaA protein n=1 Tax=uncultured marine microorganism HF4000_137B17 RepID=B3T283_9ZZZZ Length = 461 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF F G ++ L A + + L+ G G++HL+HA Sbjct: 125 TLNTKYTFGRFVVGKSNELAHAAAEAVSNRPGEVYSPLVLYGAVGLGKTHLMHAIGHRAV 184 Query: 69 QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 G ++ Y ++ T E D ++ +D+I+ + G E + F Sbjct: 185 ANGLSLIYATTEEFTNEYIKAIGEGRTEEFRDRYRSTDVLLLDDIQFLIGKEQTQEGFFH 244 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + + + +++IT DRP L L + SRL G + +Q E +L L+ +A Sbjct: 245 TFNALHMTNR-QIVITSDRPVSALTLLEDRIQSRLAGGLVVDIQAPDIETRLAILRAKAE 303 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ++ + V FL +R+ + +R L +L+++ + L + VK + Sbjct: 304 TINQDVSQTVLDFLAERIHKNIRELEGSLNRVVAYADLTGSLLDVELVKRAI 355 >UniRef50_O87546 Chromosomal replication initiator protein dnaA n=2 Tax=Treponema RepID=DNAA_TREDE Length = 469 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 14/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L + F F G N++ + ++ G G++HL+ A ++ Sbjct: 130 LRPEYNFEDFVVGPNNNFGVNAAIAVSTNPGSAYNPFLIYGGVGLGKTHLMQAIGNKIWD 189 Query: 70 RGD-AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 V YV + T +P ++ ID+I G + +F Sbjct: 190 TTKLKVIYVTAENFTNEFVECVQKKMMPAFKSKYRKADVLLIDDIHFFQGKVETQEELFH 249 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + E K +++ T DRPP +L L SR + G LQ + E + L + Sbjct: 250 TFNELYEKNK-QIVFTCDRPPAELKNLSQRLKSRFERGLNVDLQTPAYEIRYAILLKKME 308 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P + + K + +R L L +L + ++ + K +L+ Sbjct: 309 KHSTKIPNEFIDMVAKNVSSNVRDLEAALTKLIAYTELTKKTMDEATAKNLLR 361 >UniRef50_A8SK31 Chromosomal replication initiator protein dnaA n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SK31_9FIRM Length = 471 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 18/238 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAEL 67 L D TF +F G N+ A + + ++++ G G++HL+ A E+ Sbjct: 131 LTFSDRFTFNNFVKGKNNEFAMAAAEAVAKNPAGTYNPLFIYGNSGLGKTHLMKAIGHEI 190 Query: 68 SQR-GDAVGYVPLDKRT------------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 + V Y+ +K T E ++ ++ ID+I+ IAG + Sbjct: 191 HKNFDCKVLYLSSEKFTIDLIDSIRDKNQNSESEFRKKYRNVDVLLIDDIQFIAGKTATQ 250 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + K +++I+ DRPP+++ L SR + G +QP E ++ L Sbjct: 251 EEFFHTFNELYSRNK-QIIISSDRPPKEIKNLEDRLKSRFNMGLTVDIQPPDFETRMAIL 309 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTL-DQLDRASITAQRKLTIPFVKEIL 231 Q + + L +V F+ + +R L L + L + +T+ +VK IL Sbjct: 310 QDKVKYEPIALSNEVLEFIAMNIKTNIRELEGALINVLAHYKLKQDAPMTVDYVKRIL 367 >UniRef50_A3EQC2 Chromosomal replication initiator protein dnaA n=4 Tax=Leptospirillum RepID=A3EQC2_9BACT Length = 465 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 15/236 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAE 66 L F ++ G + A + YL+ G G++HL+ A Sbjct: 125 NSNLNPRYFFENYVVGVCNQFAHAAAFAIANNPSKAYNPFYLFGSVGLGKTHLVSAIGNC 184 Query: 67 LSQ--RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + V Y+ + + E + + ++ +D+++ ++G E + Sbjct: 185 MIALYPSLKVLYITTESFLNEMVSAIKFNKMNEFRERYRKIDVLIMDDVQFLSGKERTQE 244 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +F +N + E+GK +++++ D P + L SR WG I +Q E K++ L+ Sbjct: 245 ELFYTFNALYENGK-QIILSSDCMPNDIPTLEGRLKSRFGWGLIADIQIPDFETKVEILK 303 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +LP DV FL + +R L + +L + +TI + +L Sbjct: 304 GKMAQEKVDLPMDVVYFLANSIKSNIRELEGAMIRLGAYGNLMGKPITIEVARNLL 359 >UniRef50_C0W4T1 Chromosomal replication initiator protein dnaA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4T1_9ACTO Length = 525 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 15/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAE 66 L TFA++ G ++ L + + ++++ G G++HLLHA Sbjct: 179 DSRLNPRYTFATYVQGKSNRLARTAAAAVAEAPSRAYNPLFIYGGSGLGKTHLLHAIGHY 238 Query: 67 LSQ--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + G V YV ++ + D ++ ++ +D+++ G E Sbjct: 239 ARKLYPGITVKYVNSEEFVSDFIASVADGQMRNFKDRYRNVDILLVDDVQFFEGKEQTLE 298 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + + K ++++T D+P +L L SR G + +QP E + L Sbjct: 299 EFFHTFNALRIAEK-QIVLTSDQPALELKGFNNRLISRFQEGLVADVQPPDLETRQAILT 357 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L+AR G + EDV ++ R+ +R L L ++ + ++ + + LK Sbjct: 358 LKARADGISVTEDVLEYIASRVTTNIRELEGALVRVTAFASLNKQPIDRTLAEVALK 414 >UniRef50_Q2KTI9 Chromosomal replication initiator protein dnaA n=7 Tax=Betaproteobacteria RepID=DNAA_BORA1 Length = 483 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 16/237 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L D TF +F G + L A + + ++L+ G G++HL+HA + Sbjct: 145 SRLNTDLTFENFVTGKANQLARAAALQVAENPGTSYNPLFLYGGVGLGKTHLIHAIGNAM 204 Query: 68 SQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 G V YV D+ V + L L+ ID+I+ +G + Sbjct: 205 VAAGTGVRVRYVHADQYVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKNRTQEE 264 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F + ++ + + +++IT D P++L+ L SR D G ++P E ++ L Sbjct: 265 FFYAFEAMV-AQRKQIIITSDTYPKELSGIDSRLISRFDSGLTVAIEPPELEMRVAILLR 323 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 +A G +PE+V F+ K L +R L L ++ + R+ L + KE LK Sbjct: 324 KAESEGVPMPEEVAFFIAKHLRSNVRELEGALRKVLAYARFHGREALNVDVCKEALK 380 >UniRef50_D0LFK9 Chromosomal replication initiator protein dnaA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFK9_HALO1 Length = 498 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 16/235 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAEL-- 67 L TF SF G ++ L A H +++ G G++HLLH+ L Sbjct: 161 LNPRYTFDSFVAGPSNQLALAASQAAASSHPPKYNPVFICGGVGLGKTHLLHSIGHSLHG 220 Query: 68 SQRGDAVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 + + Y+ ++ + E L+ ID+++ +AG + + Sbjct: 221 LRPDARILYLSGERFMNEYILAIRSNRMHEFRRRYREGCDLLLIDDVQFLAGKDGTQDEF 280 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + +S + ++++T DR P +++ L SR WG + ++P E ++ L+ + Sbjct: 281 FHTFNALHDSQR-QIVLTADRKPHEISDIADRLRSRFQWGLLADIEPPELEMRMAILRQK 339 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A ELP+DV ++ + +R L L +L + +++ +T+ F +E L+ Sbjct: 340 AEAEHIELPDDVVLYIATAIRANVRELEGALIRLSAYASLSRKPITLAFARETLE 394 >UniRef50_C0YJ04 Chromosomal replication initiator protein dnaA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ04_9FLAO Length = 484 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 104/239 (43%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 + L D +F S+ G+++ A + + + ++L+ G G++HL A Sbjct: 144 IDSNLKPDYSFDSYVEGESNKFAATVARSIAKRPGATAFNPLFLYGGYGVGKTHLGQAVG 203 Query: 65 AELSQRGDA--VGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELW 113 E+ + V Y+ +K E + + + ++ ID+I+ ++G Sbjct: 204 LEVKNQFPDKVVLYLSSEKFIQQFISAAKAHKQTEFANFYQMVDVLIIDDIQFLSGKSAT 263 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + + F +++ + ++GK ++++T D+ P + + SR WG +++ + Q Sbjct: 264 QDSFFHIFDHLHQNGK-QIILTSDKAPADIMDIQDRIVSRFKWGLSAEIKSPDLSTRRQI 322 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ + G LP D+ FL +R L ++ + S +R L++ +KE + Sbjct: 323 IEDKLSRDGIVLPGDMLDFLAAEAKTNVRELIGVINSVIAYSTVYKRDLSLELLKETIN 381 >UniRef50_C5NVU9 Chromosomal replication initiator protein dnaA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVU9_9BACL Length = 494 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F G+ ++ + + ++++ G G++HLLHA E+ Sbjct: 149 TLNKNYTFENFVVGEGNAFTHNIAWNVAVSPGGIYNPLFIYGGVGLGKTHLLHAIGNEME 208 Query: 69 QRGD--AVGYVPLDKR-----------------TWFVPEVLDGMEHLSLVCIDNIECIAG 109 + + +K T + + + ID+I+ ++G Sbjct: 209 ANFPDFKIECISSEKFLNEFLASIKPMKDKNNYTNADEDFRRKYRDVDALLIDDIQFLSG 268 Query: 110 DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDED 169 + A F +N + + K ++++ DR P QLN L +R G + P E Sbjct: 269 KTETQNAFFHTFNELQMNQK-QIVLISDRSPSQLNDLEDRLVTRFSQGITADITPPDFET 327 Query: 170 KLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKE 229 ++ ++ + +L E+ ++ + +R L L ++ + + + ++ +E Sbjct: 328 RMAIIKFKCEQFDIKLDEETLTYISSNVSSNIRELEGVLKRIKFTATSKHEQPSLSIAEE 387 Query: 230 ILK 232 ILK Sbjct: 388 ILK 390 >UniRef50_A7H675 Chromosomal replication initiator protein dnaA n=4 Tax=Anaeromyxobacter RepID=A7H675_ANADF Length = 460 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 14/237 (5%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 TF +F G+++ A + ++L G G++HLLHA Sbjct: 121 PRESRPNPRYTFDTFVVGESNRFAFAAAQAVAANPGHTWNPLFLHGDSGLGKTHLLHALA 180 Query: 65 AELS-QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWE 114 + ++G V V ++ T + + + + +D+++ +AG + Sbjct: 181 HAILDKQGGRVAIVSSERYTNDFVAALSKGTMDDFRRKYRECTALLVDDVQFLAGKDKTA 240 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + + +++++ DR P++L L SR +WG +++ E + L Sbjct: 241 EEFFHTFNELHDHH-VQIVLSSDRSPKELKGLDARLCSRFEWGMRVQVEAPEFETRAAIL 299 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 Q +A + +LP DV + L + +R L L +L + +T+ +++L Sbjct: 300 QKKAEVESIDLPGDVTQLLAAHIRSNVRELEGALMRLAAFASLKSEPITVALARDVL 356 >UniRef50_D2RMT1 Chromosomal replication initiator protein DnaA n=2 Tax=Acidaminococcus RepID=D2RMT1_ACIFE Length = 386 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 15/242 (6%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLH 61 Q L TF +F G+++ A + +L++ G G++HL++ Sbjct: 39 PQKPFVTNLSPRYTFDNFVVGNSNRFAKAAAMAVANNPAFAYNPFFLFSDSGLGKTHLMN 98 Query: 62 AACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGD 110 A ++ + + Y+ + T + E + + ++ ID+I+ + Sbjct: 99 AIGNQIRKNHPDMKILYISSETFTNELIESVEHNRLEAFREKYRSIDVLLIDDIQFLRNR 158 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 E + F +N + ++ K +++I+ DRPP +L+ + SR + G +Q E + Sbjct: 159 ESTQEEFFHTFNTLEKANK-QIIISSDRPPAELDTLEERMISRFNSGLTADIQHPDLETR 217 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + LQ A P DV + + +R L +++ S ++ +T+ + Sbjct: 218 MAILQNLAHTDKVPFPNDVILLIASSITSNIRELEGAYNRVCAYSTVSKEPITLELCRSA 277 Query: 231 LK 232 LK Sbjct: 278 LK 279 >UniRef50_B5JZC6 Chromosomal replication initiator protein dnaA n=2 Tax=Octadecabacter antarcticus RepID=B5JZC6_9RHOB Length = 454 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 20/250 (8%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 + P + TF SF G + L A + + ++L+ G G++ Sbjct: 102 VRKPTNTLVDAQPDQRFTFDSFVVGKPNELAHAASKRVAEGGPVTFNPLFLYGGVGLGKT 161 Query: 58 HLLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIEC 106 HL+HA EL +R V YV D+ + + + ++ +D+I+ Sbjct: 162 HLMHAIAHELGERRPDLNVLYVSADQFIYRFISALRDRKMMDFKQHFRSVDVLMVDDIQF 221 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 + G E + F YN + + GK +++I+ DR P ++ + SRL G + L P Sbjct: 222 LEGKESTQEEFFHTYNALADQGK-QMIISADRAPGEIRDLSERIKSRLQCGLVVDLHPTD 280 Query: 167 DEDKLQALQLRARLR-----GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 E +L L + + G E+ V FL R+ +R L L++L + R Sbjct: 281 YELRLGILHAKQEMFVNVYPGVEIATGVLEFLAHRISSNVRVLEGALNRLYALASMVGRT 340 Query: 222 LTIPFVKEIL 231 +T+ ++ L Sbjct: 341 VTVEMAQDCL 350 >UniRef50_C6V4C4 Chromosomal replication initiator protein dnaA n=25 Tax=cellular organisms RepID=C6V4C4_NEORI Length = 598 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 20/233 (8%) Query: 18 TFASFWPGDNSSLLAALQNVLRQ------EHSGYIYLWAREGAGRSHLLHAACAELSQR- 70 TF SF G ++ L + + S ++L+ G G++HL+HA + Sbjct: 264 TFDSFVVGKSNELAFTASKRVAEAAELPIPGSNPLFLYGGVGLGKTHLMHAIVWHIKANY 323 Query: 71 -GDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ +K + + ++ +D+++ I+G E + F Sbjct: 324 ADRRVIYLSAEKFMHKYITALKNKDMMSFKQIFRSVDVLMVDDVQFISGKESTQEEFFHT 383 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N ++E K +L+I+ DR P L + SRL WG + + + E ++ L+ + Sbjct: 384 FNALIEQNK-QLVISADRSPSDLQGVEERIQSRLSWGLVADINQTTFELRVGILESKLEQ 442 Query: 181 RG--FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +P+ V F+ + + +R L L+++ S +T+ K++L Sbjct: 443 MKSDIVVPKKVVEFMARNIVSNVRELEGALNKVIAHSEITGSVVTVDSAKDLL 495 >UniRef50_C4LGB0 Chromosomal replication initiator protein dnaA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LGB0_CORK4 Length = 605 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 104/234 (44%), Gaps = 15/234 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ TF + G+ + ++ A + + +++W G G++H+LHA + Sbjct: 267 LNENYTFDNLVAGEGNRVVRAAAIAVAENPAQAYNPLFIWGGSGLGKTHILHAIGHRALE 326 Query: 70 --RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV +++ T + ++ +D+I+ +AG ++ F Sbjct: 327 LRPNLRVRYVSIEEYTNEWINSIRNNRGEDFKRKYRSFDILLVDDIQFLAGKPETQIEFF 386 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + + K ++++ DR P++L P L +R WG +Q E ++ L+L+A Sbjct: 387 HNFNALHGAQK-QIVLCSDRSPKELTELEPRLRTRFQWGFTQDIQKPDLETRIAILRLKA 445 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++P +V F+ ++ +R L L+++ S +T+ ++ L+ Sbjct: 446 ERENAQVPSEVLSFIAEQKAESVRELEGALNKVLIVSSIQHTPVTLEMARDQLQ 499 >UniRef50_Q28WI0 Chromosomal replication initiator protein dnaA n=5 Tax=Rhodobacteraceae RepID=DNAA_JANSC Length = 475 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 20/238 (8%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELSQ 69 L + TFA+F G + L A + + ++L+ G G++HL+HA +L Sbjct: 135 LNPNFTFANFVVGKPNELAHAAARRVAETLDVTFNPLFLYGGVGLGKTHLMHAIAWDLQD 194 Query: 70 RGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 R + ++ ++ + + ++ +D+++ IAG + F Sbjct: 195 RHPDAKILFLSAEQFMHRFVRALREQDTFNFKETFRSVDILMVDDVQFIAGKTSTQQEFF 254 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N ++E GK +++I+GDR P + +ASRL G + + P E +L LQ +A Sbjct: 255 HTFNALVEMGK-QIVISGDRAPVDMEELDNRIASRLQCGLVVDIHPTDYELRLGVLQHKA 313 Query: 179 RLRGFELPE-----DVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L G + P V +L +++ +R L L +L + +R++T+ KE L Sbjct: 314 ELLGAKYPHITFATGVLEYLAQKISSNVRVLEGALTRLFAFADLVRREVTVDLAKECL 371 >UniRef50_Q1PVD7 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVD7_9BACT Length = 472 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 88/233 (37%), Gaps = 14/233 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 + TF +F + + A + +++ G G++HL+HA + Sbjct: 137 SSINKRYTFENFVVAAYNRMAHAAAISVAGSPGYAYNPLFIHGASGLGKTHLMHAINNFI 196 Query: 68 SQRGD-AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q+G Y+ + + ++ ++ +D+I+ Sbjct: 197 LQQGRLKTFYLSCEHFVNHYISAIQSNNMEAFRKFYRNVDVLLMDDIQFFENSYGSREEF 256 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + GK +++IT + PP + L SR WG + + S E + ++ R Sbjct: 257 FHTFNALYNDGK-QIVITSNYPPESIAYMEDRLVSRFKWGLVCGISTPSLETRAAIVEKR 315 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 A ++ + +L + + +R L + +L + ++ F++++ Sbjct: 316 AAAWNIKVSHESAVYLAENIPGNIRELEGAIARLSNEAKATNNAVSFDFIRKV 368 >UniRef50_A8EY77 Chromosomal replication initiator protein dnaA n=16 Tax=Rickettsiales RepID=DNAA_RICCK Length = 463 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 17/238 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS-----GYIYLWAREGAGRSHLLHAACA 65 L TF +F G + L A + + ++L+ G G++HL+HA Sbjct: 124 STLDVRFTFDNFVVGVPNELAYAAARAVAESTDAVSESNPLFLYGGVGLGKTHLMHAIGW 183 Query: 66 ELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWE 114 + Q V Y+ +K V + + ++ ID+I+ I G + + Sbjct: 184 YIKQNNPNRKVIYMSAEKFMYQFVKALRNKEVISFKEKFRSVDVLMIDDIQFICGKDSTQ 243 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N ++++ + +++I+ DR P L+ + SRL WG + + + E +L L Sbjct: 244 EEFFHTFNTLIDNNR-QIVISCDRSPSDLDNIEDRIKSRLGWGLVADVHSTTYELRLGIL 302 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + ++P++V FL ++ +R L L+++ S +++T+ + IL+ Sbjct: 303 ESKIEQMNVKIPKNVIDFLASKIVSNVRELEGALNKVIAHSNFTLKEITLENTQNILR 360 >UniRef50_B3DWG6 Chromosomal replication initiator protein dnaA n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNAA_METI4 Length = 454 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L +F +F G NS AA + + ++L+ + G G++HL+ A + Sbjct: 114 GLNTKFSFENFVVGPNSEFAAAAAKAVAESPAKAYNPLFLYGKVGLGKTHLMQAIGNHIV 173 Query: 69 QRGDA--VGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 ++ V YV ++ T E + ++ ID+I+ +AG E + Sbjct: 174 EKNKWILVQYVTSEQFTNEFIEAIQKGSIGQFRKKYRQIDVLLIDDIQFLAGKERSQEEF 233 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + + G +++++GD P L L SR +WG ++ P E +L L+ + Sbjct: 234 FHTFNCLFD-GSKQIVLSGDEAPSSLQNLEKRLISRFEWGLTAEILPPGIEVRLAILKHK 292 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-KLTIPFVKEILK 232 + + E + F+ +R+ +R L L++L + + K+T+ + +LK Sbjct: 293 LKNYSLSIDEKILEFIAERIKTNVRQLEGALNRLCAYASIHKEGKITLEETQSLLK 348 >UniRef50_A6DPS9 Chromosomal replication initiator protein dnaA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPS9_9BACT Length = 470 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 17/245 (6%) Query: 3 TPAQLSLPLYLP--DDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRS 57 TP +L P P D +F +F GD++ L A + + ++++ G G+S Sbjct: 122 TPKELKAPNNFPSSDRYSFKNFVVGDSNRLAFATSKAVSESPGFSFNPLFIYGSSGLGKS 181 Query: 58 HLLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIEC 106 HLLHA E + Y+ ++ + + ++ ++ +D+++ Sbjct: 182 HLLHAIAQETLSHNPYHRIEYLSAEEFSNIFIDSIKNQDGHNFRKRFRNVDILLLDDVQF 241 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 + + F +N + K ++++T D P +L+ L SR + GQI + Sbjct: 242 LKNKTKTQEEFFHTFNALYSLNK-QIVLTSDCQPHELDGLEKRLVSRFEHGQIVDVLKPE 300 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 E ++ L+L+ +P +V F+ + +R L L +L + T ++ + Sbjct: 301 FETRVAILRLKRDSMNVHIPNEVLDFIASNIKSHIRKLEGALVRLVTYASTMGYEVNVSL 360 Query: 227 VKEIL 231 +E+L Sbjct: 361 AREVL 365 >UniRef50_C7REZ5 Chromosomal replication initiator protein dnaA n=5 Tax=Anaerococcus RepID=C7REZ5_ANAPD Length = 459 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 101/236 (42%), Gaps = 21/236 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH--------SGYIYLWAREGAGRSHLLHAA 63 L ++ FA+F G ++ + + + ++++ G G++HL+ A Sbjct: 118 QLEEENIFANFVEGKSNQYALGVSQAVAENISNKSQARLYNPLFIYGESGLGKTHLMQAI 177 Query: 64 CAELSQR--GDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDEL 112 E+ V Y+ +K T + + + + ++ ID+I+ IAG E Sbjct: 178 AHEILDNRDDAYVMYLSSEKFTNEMISALRSTKNEKFREKYRSVDILLIDDIQFIAGKEG 237 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F +N + +GK +++I+ DRPP+++ L SR WG I + E ++ Sbjct: 238 TQEEFFHTFNDLYNTGK-QIVISSDRPPKEIKHLENRLISRFSWGIIVDIGKPDFETRVA 296 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFV 227 LQ + G + ++ ++ + +D +R L L + + R+ +T+ Sbjct: 297 ILQKKLDQLGAYIDNNILFYIAENIDTNIRDLEGALSTAIAYAKSDNREVVTMEDA 352 >UniRef50_A9GHT5 Chromosomal replication initiator protein dnaA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHT5_SORC5 Length = 471 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 16/234 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAE 66 P L TFASF G ++ L A +++ G G++HL+HA Sbjct: 131 PDDLNPKHTFASFVVGPSNQLAHAAAIAAAGGGGRRYNPLFICGGTGLGKTHLMHAIAHR 190 Query: 67 L--SQRGDAVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDELWE 114 + + + YV +K T + E ++ +D+I+ +AG E + Sbjct: 191 VFEGRPDARIIYVSAEKFTNDFITAIQHHRMDEFRTRYRSSCDVLLVDDIQFLAGREQTQ 250 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + + ++++T D+ P+ L L SR WG + +Q E ++ + Sbjct: 251 EEFFHTFNALHTLDR-QIVVTSDKYPQNLERMEERLVSRFSWGLVADIQVPELETRVAIV 309 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 + +A L G L +DV +L + + +R L TL +L S R + +PF + Sbjct: 310 RNKAALEGIALTDDVALYLAQMVRSNVRELEGTLIRLAAKSSLTGRPVDLPFAR 363 >UniRef50_B4EY85 DnaA-homolog protein hda n=181 Tax=Gammaproteobacteria RepID=HDA_PROMH Length = 248 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 180/233 (77%), Positives = 211/233 (90%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +NTP+QLSLPL LPDDETF SF+ G+N+SL+AA+Q + Q H YIY W+R+G G+SHLL Sbjct: 16 LNTPSQLSLPLSLPDDETFDSFYAGENASLVAAIQTAIHQSHGSYIYFWSRDGGGKSHLL 75 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACAELS GDAVGYVPLDKR +FVP+VL+GMEHLSLVCIDN++CIAGDE WE+A+F+L Sbjct: 76 HAACAELSLAGDAVGYVPLDKRAYFVPDVLEGMEHLSLVCIDNVQCIAGDEEWELALFNL 135 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+LE G+T LLITGDRPPRQ++L LPDLASRLDWGQIY+LQPLSDE+K+QALQLRA+L Sbjct: 136 YNRVLELGRTCLLITGDRPPRQIDLQLPDLASRLDWGQIYRLQPLSDEEKIQALQLRAKL 195 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPEDVGRF+LKRLDR+MRTLF LD+LD ASI AQRKLTIPFVK+ILKL Sbjct: 196 RGFELPEDVGRFVLKRLDRKMRTLFEMLDELDHASIVAQRKLTIPFVKDILKL 248 >UniRef50_A1T0X4 Chromosomal replication initiator protein dnaA n=40 Tax=Gammaproteobacteria RepID=DNAA_PSYIN Length = 458 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 16/237 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 L TF +F G +++ A + + ++L+A G G++HLLHA + Sbjct: 120 SNLIKKYTFDNFVEGKSNNFAIATTQQIAENPGDVYNPLFLYAHPGLGKTHLLHAVGNAI 179 Query: 68 SQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 V Y+ ++ + + + L + ID+I AG + + Sbjct: 180 LAENPESKVVYIRSERFVQDMINSIRNNTIEQFKEYYASLDALLIDDIHFFAGKDRSQEV 239 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 +F +N +L++ + ++++T DR P+++ L +R WG + P E ++ L Sbjct: 240 LFQTFNSMLDAHQ-QVILTSDRFPKEIEGIDERLRTRFGWGLSIPIDPPELETRVAILIT 298 Query: 177 RARLRGFELPEDVGRFLLKRLD-REMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A RG +LP+DV F+ KRL ++R L + + + + +TI V++ L+ Sbjct: 299 KAEERGLKLPDDVAFFIAKRLTITDVRVLEGAIANISAKAQFTGQGITISLVQDALR 355 >UniRef50_C6X3K6 Chromosomal replication initiator protein dnaA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3K6_FLAB3 Length = 488 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 106/239 (44%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 + L D +F ++ G+++ + + + + ++L+ G G++HL HA Sbjct: 148 IDSNLKADFSFDNYVEGESNKFASTVARSIAKRPGATAFNPLFLYGGYGVGKTHLGHAVG 207 Query: 65 AELSQRGDA--VGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELW 113 E+ V Y+ +K E + + + ++ ID+I+ ++G + Sbjct: 208 LEVKNSYPDKVVLYLSSEKFIQQFVSAAKAHKQTEFANFYQMVDVLIIDDIQFLSGKKST 267 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + + F +++ + ++GK ++++T D+ P + + SR WG +++ + + + Sbjct: 268 QDSFFHIFDYLHQNGK-QIILTSDKAPVDILDIQDRIVSRFKWGLSAEIKSPDFDTRRKI 326 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + + G L ED+ FL + +R L ++ + S + +L++ +KE + Sbjct: 327 IVDKLSRDGIVLTEDMLDFLASEVKTNVRELIGVINSVIAYSTVYKSELSLELLKETIN 385 >UniRef50_Q0I8T6 Chromosomal replication initiator protein dnaA n=44 Tax=cellular organisms RepID=DNAA_SYNS3 Length = 468 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 18/243 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHL 59 P +L L F F G NS + A + + +++ G G++HL Sbjct: 122 APRRLP---GLNMRYVFNRFVVGPNSRMAHAAALAVAEAPGREFNPLFICGGVGLGKTHL 178 Query: 60 LHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIA 108 + A + V YV + T + D L+ +D+I+ I Sbjct: 179 MQAIGHYRLEIDPEARVFYVSTETFTNDLITAIRKDGMQAFRDRYRAADLILVDDIQFIE 238 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 G E + F +N + ++G+ +++I DRPP Q+ L SR G I +Q E Sbjct: 239 GKEYTQEEFFHTFNALHDAGR-QIVIASDRPPSQIPRLQERLISRFSMGLIADIQAPDLE 297 Query: 169 DKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 ++ LQ +A LP D+ +++ R +R L L + S +T+ V Sbjct: 298 TRMAILQKKAEQERVALPRDLIQYISGRFTSNIRELEGALTRAVAFSSITGIPMTVESVA 357 Query: 229 EIL 231 +L Sbjct: 358 PML 360 >UniRef50_A8SBW1 Chromosomal replication initiator protein dnaA n=4 Tax=Clostridiales RepID=A8SBW1_9FIRM Length = 440 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 15/233 (6%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQR 70 + TF +F G ++ A + ++++ G G++HLL A E+ + Sbjct: 105 NYEFTFENFIKGPSNQFAFAAAQAVAANPSGAYNPLFIYGGSGLGKTHLLTAIQTEIKRT 164 Query: 71 GDA--VGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + YV ++ T + + L+ +D+I+ IAG E + F Sbjct: 165 HPDFVIMYVTCEQFTNELIAAIRAGSTEDFRMKYRVADLLLVDDIQFIAGKESTQEEFFH 224 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N + ++ K +++I DRP +++ L +R +WG +QP E ++ ++ +A Sbjct: 225 TFNSLHDAHK-QIVIASDRPAKEIKSLEERLRTRFEWGLTADVQPPDFETRVAIVKRKAE 283 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +LPEDV F+ L +R L + +L+ + + I + +K Sbjct: 284 LLHLDLPEDVAEFIANHLKNNIRQLEGAVKKLNAYYMLEGIQPVISVAQNAIK 336 >UniRef50_C7NC96 Chromosomal replication initiator protein dnaA n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NC96_LEPBD Length = 451 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 20/239 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L F +F G+NS L + ++++ G G++HL+ A E+ Sbjct: 107 GLNPKHRFDNFIVGENSKLAYNACLAVVNNPTPVYNPLFIYGSSGLGKTHLMQAVGNEIL 166 Query: 69 QRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIA-----GDEL 112 + V Y ++ + D L ++ +D+I+ G+ Sbjct: 167 ENNPNKRVYYSTSEEFANEFFKVLNGGRIQHFRDTFRALDVLLLDDIQFFEKVFGRGEGT 226 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 E F +N++ E GK ++++ D+ P+++ L SR G ++Q E ++ Sbjct: 227 VEEEFFHTFNKLQELGK-QIIMISDKSPKEIKNLSKRLESRFLSGLTVEIQSPGFETRMM 285 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ A+ + E+ + + ++ L+ +R L TL L+ + K+T+ V+E+L Sbjct: 286 ILKNMAKTQDIEIDDSILEYISDSLNTNVRELEGTLTNLNARAKLLNEKITLQLVQEML 344 >UniRef50_C5CH91 Chromosomal replication initiator protein dnaA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=DNAA_KOSOT Length = 447 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 100/237 (42%), Gaps = 15/237 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAE 66 L L + TF +F G + +L + + + +++ G G++HLL A + Sbjct: 100 LISNLNANYTFENFVVGPENRVLYEVSLEISRNPGRYNPFFVYGMVGLGKTHLLQAIAHK 159 Query: 67 LSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEH-LSLVCIDNIECIAGDELWE 114 + + V Y+ ++ + + + ++ ID+I+ + G + Sbjct: 160 IMELHPEMRVLYITSEQFMNDMIDSIKYGSVRDFREHYRKKADVLLIDDIQFLIGKNGVQ 219 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 +F +N + ++GK +++I DR P +LN L SR G + ++ P + + + Sbjct: 220 KELFHTFNELYDAGK-QIVICSDRNPEELNGFHDRLVSRFQMGMVMEICPPEKDTRFKIA 278 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + A LP+DV + L +D +R L + +L S + ++ +IL Sbjct: 279 KKFAERESVSLPDDVAQLLADSVDGNLRILRGVIIKLIVQSSINKERIGAALTNQIL 335 >UniRef50_C9RIX2 Chromosomal replication initiator protein dnaA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIX2_FIBSS Length = 441 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 101/237 (42%), Gaps = 17/237 (7%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAE 66 + L F +F PGD + L + + ++++ G G++HLL + Sbjct: 101 VPLSGSFRFENFVPGDKAQLAFNAALAVARNPDGTQYNPLFIYGSSGLGKTHLLQSIGNY 160 Query: 67 LSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDELWE 114 + + V Y+ + + + E+ D + + ++ ID+I+ G + Sbjct: 161 ILEEDPTKRVIYLTSEDFSQQYMKCLQEKRITEMSDFYRNEVDILLIDDIQNWTGKYETQ 220 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + ++GK ++++T D P ++ L SR WG +QP E + L Sbjct: 221 NEFFLIFNALHQAGK-QIVLTSDAPAAEVKNLSDRLVSRFSWGLTVDIQPPDVETREAIL 279 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A R E+ ++V R+L + + +R L + +L S + + ++++ Sbjct: 280 HKKAEERHLEISDEVIRYLAENIASNVRCLESAIIKLTLQSSLMSHDIDMNIAQKVV 336 >UniRef50_B6YPZ2 Chromosomal replication initiator protein dnaA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YPZ2_AZOPC Length = 455 Score = 240 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 106/236 (44%), Gaps = 15/236 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L + +TF +F+ DN+ + + + QE +++ G G++HL HA + Sbjct: 117 NSNLNNRQTFRNFFESDNNKVAYVIAQKVAQEPGKDFNPYFIYGGPGVGKTHLCHAIGNK 176 Query: 67 LSQRG--DAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 +++ V Y+P E + + + ++ +D+I ++G E Sbjct: 177 VTEFHFQKRVIYIPAHLFQIQYTDSIRKHEPNEFIHFYQGIDILILDDIHELSGKEKTLQ 236 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 A F ++N + + G+ ++++T D+ P ++ L SRL WG +LQ E + + L Sbjct: 237 AYFHIFNHLHQLGR-QIILTADKIPAEIIGLEERLTSRLKWGLTIELQKPDLELRKKILN 295 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R R R +PE+V ++ + + R L + L S+ ++ + ++I+ Sbjct: 296 YRIRQRRLSVPEEVIDYIAENVPENARDLEGIVTSLIAYSLVDNCEINLESAQKIV 351 >UniRef50_Q1DGD6 Chromosomal replication initiator protein dnaA n=2 Tax=Cystobacterineae RepID=Q1DGD6_MYXXD Length = 450 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P L TF +F D++ L AA + + +Y++ G G++HLL A Sbjct: 112 PGRLNARFTFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLGKTHLLQAVGNL 171 Query: 67 LSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDELWE 114 + +R V ++ ++ T + + ++ +D+I+ + E + Sbjct: 172 IWERDPSQRVVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQ 231 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F +N + E K +++T D P ++ L SR G + ++ + E ++ L Sbjct: 232 KEFFYTFNTLYEMNKA-IVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAIL 290 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 Q +A G +LP+ V F+ K + + +R L L +L ++ +T F ++L+ Sbjct: 291 QKKAVAEGLDLPDSVAHFIAKHIQKNVRELEGALVKLSAVHSLTRQPVTEDFASQVLR 348 >UniRef50_Q9ZJ96 Chromosomal replication initiator protein dnaA n=14 Tax=Helicobacter RepID=DNAA_HELPJ Length = 457 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 91/230 (39%), Gaps = 13/230 (5%) Query: 15 DDETFASFWPGDNSSLLAALQNVLRQ---EHSGYIYLWAREGAGRSHLLHAACAELSQRG 71 D TF +F G ++ + + + Q + + G G++H+L+A ++ Sbjct: 112 DSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALEKH 171 Query: 72 DAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 V V + + H +D+ + + G E F +N Sbjct: 172 KKVVLVTSEDFLTDFLKHLDNKNMDSFKKKYRHCDFFLLDDAQFLQGKPKLEEEFFHTFN 231 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + + K ++++ DR P+ + L SR +WG K+ P E KL ++ + +L Sbjct: 232 ELHANSK-QIVLISDRSPKNIAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNK 290 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LPE+V ++ + + +R + + ++ + + + K +L+ Sbjct: 291 ITLPEEVMEYIAQHISDNIRQMEGAIIKISVNANLMNATIDLNLAKTVLE 340 >UniRef50_A6G3S7 Chromosomal replication initiator protein dnaA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3S7_9DELT Length = 453 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 P L F SF G ++ L A+ ++++ G G++HLLH E Sbjct: 115 PTGLHPRYRFDSFIKGASNELAASAAMAASDAPGTRFNPLFIYGGVGLGKTHLLHGIGHE 174 Query: 67 LSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEH-LSLVCIDNIECIAGDELWE 114 L ++ + Y+ + E + ID+I+ IAG + Sbjct: 175 LHRKDPSLRIVYLSAEHFMNEFVTAVRNNQFDEFRARYRKDCDCLLIDDIQFIAGRDRTM 234 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F ++N + E+GK ++++T DR P + L SRL+WG + +QP E ++ + Sbjct: 235 DEFFHVFNALYEAGK-QIVVTSDRVPADMPGMEARLTSRLNWGLVADVQPPDLETRIAIV 293 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 Q +A G ELP +V + + + +R L L ++ + + FV+ +L Sbjct: 294 QAKAERDGMELPAEVCLTIAELVRSNVRELEGALLRVTAFAQLRGVAIDKAFVESVL 350 >UniRef50_Q5M226 Chromosomal replication initiator protein dnaA n=70 Tax=Streptococcaceae RepID=DNAA_STRT1 Length = 454 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 18/248 (7%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 TP +L L TF +F GD + A + ++++ G G++H Sbjct: 104 QTPDLPTLNSDLNSKYTFDNFIQGDENRWSVAASLAVADSPGATYNPLFIYGGPGLGKTH 163 Query: 59 LLHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECI 107 LL+A ++ + Y+ + + E+ HL ++ ID+I+ + Sbjct: 164 LLNAIGNKVLHDNPQARIKYITAENFINEFVLHIRLDKMDELKLKYRHLDVLLIDDIQSL 223 Query: 108 AGD--ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 A + + F+ +N + ++ K ++++T DR P QLN L +R WG + P Sbjct: 224 AKKSTQATQEEFFNTFNVLHDNNK-QIVLTSDRNPDQLNEMEERLVTRFKWGLTVNITPP 282 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTI 224 E ++ L + + P + +L + D +R L L + + Q +T+ Sbjct: 283 DFETRVAILTNKIMDYDYHFPPETIEYLAGQFDSNVRDLEGALKDISLVANVRQLDTITV 342 Query: 225 PFVKEILK 232 E ++ Sbjct: 343 EVAAEAIR 350 >UniRef50_C4K7F6 Regulatory factor involved in inactivation of DnaA n=4 Tax=Enterobacteriaceae RepID=C4K7F6_HAMD5 Length = 246 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 169/233 (72%), Positives = 200/233 (85%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 +N P QL LPL+LPDD TF+ F+PGDNS+LLAA+++ L H YIY W+++G+GRSHLL Sbjct: 14 LNNPTQLPLPLFLPDDATFSGFYPGDNSALLAAIESALCDSHGRYIYFWSKQGSGRSHLL 73 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAAC+ LS++G AVGYVPLDKR +F EVL+GME L+L+CIDNIE I GD WEM IF L Sbjct: 74 HAACSTLSKQGKAVGYVPLDKRAYFTVEVLEGMEQLALICIDNIEHIVGDIEWEMGIFHL 133 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNRILE T LL+TGDRPPRQL+L LPDLASRLDWGQIYKLQPLSD+DK+ +LQLRA+L Sbjct: 134 YNRILEKDHTCLLMTGDRPPRQLHLHLPDLASRLDWGQIYKLQPLSDDDKVLSLQLRAKL 193 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPE+VGRF+LKRLDREM +LFM LD+LD+ASI AQRKLTIPFVKEIL+L Sbjct: 194 RGFELPEEVGRFMLKRLDREMPSLFMALDRLDKASIRAQRKLTIPFVKEILRL 246 >UniRef50_B2KAM4 Chromosomal replication initiator protein dnaA n=1 Tax=Elusimicrobium minutum Pei191 RepID=DNAA_ELUMP Length = 452 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGRS 57 N A++ P L + TF F G ++ + ++ + + +++ G G++ Sbjct: 101 NYNAKIPFPSRLNPNYTFEGFIEGPSNRFAYRAAEAVVKKLGERENNPLVIYSTPGLGKT 160 Query: 58 HLLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIEC 106 HLLHA + + + Y+ ++ E L +D+I+ Sbjct: 161 HLLHAIGNRILKENPYAKILYMSGEEFVSEYIESLQNRNPEAFRKKHRSLDCFLMDDIQF 220 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 +AG E F +N + ES K ++++T DR P+QL P L+SRL G + +++ Sbjct: 221 VAGKESSVQEFFYTFNALFES-KKQIVLTSDRTPQQL-GIDPRLSSRLLSGIVSEIKRPD 278 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 E ++ L+ + F++ +DV F+ + + +R L L +L TIP Sbjct: 279 LETRIAILRQKRDTSNFDVGDDVIAFIAEGVQASIRELEGCLFRLTTYCNIHGVTPTIPI 338 Query: 227 VKEIL 231 +E+L Sbjct: 339 AREVL 343 >UniRef50_UPI000196B720 hypothetical protein CATMIT_00448 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B720 Length = 459 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 19/240 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAE 66 +L + TF +F G+ + + + + ++L + G G++HLL+A Sbjct: 113 FDDHLSAELTFDNFVVGNCNRIAQNAALAVALKPGTYNPLFLHSNSGLGKTHLLNAIGNY 172 Query: 67 LSQR--GDAVGYVPLDKRTWFVPEVL---------DGMEHLSLVCIDNIECIAGDELWEM 115 + ++ G + Y + E + + ++ ID+I+ IA E Sbjct: 173 VKKKFPGKRILYTNAEAFVNDYVEAIGNNTIATFNRRYRSVDVLLIDDIQFIANKEGSME 232 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F+++N + SGK +++IT D+PP +L L SR G + E L+ Sbjct: 233 MFFNIFNTLQHSGK-QIVITSDKPPVELKGMENRLVSRFRQGLTVTIDNPEFETAKAILK 291 Query: 176 LRARLRGFELP--EDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK---LTIPFVKEI 230 + R + P E+V F+ ++++R L + L + + +++ F E Sbjct: 292 KKIESRMIDYPIDEEVLDFIASHFNKDVRDLEGAVTTLLFYKVVCGQNLDHISLDFALEA 351 >UniRef50_Q2BH23 DnaA family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH23_9GAMM Length = 234 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 142/229 (62%), Gaps = 1/229 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 N P Q+ L + L DD F +F+ N + A L+ + + ++W EG G +HLL Sbjct: 4 NHPFQIPLSVSLRDDARFENFYAQGNELVCATLKAAAQGTGEQFTFIWGNEGVGCTHLLQ 63 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A C E G + Y+PLD+ +L+GME L LVC+D ++ +AGD WE+A+F + Sbjct: 64 AICHEAEPLGRSAAYLPLDELKHMGSGILEGMEFLDLVCLDAVQSVAGDRDWEVALFHFF 123 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NRI E G L+I PR L + LPDLASRL WG ++++QPLSD+ KL+A+Q+RA R Sbjct: 124 NRIREQG-NTLVIASTSAPRYLGISLPDLASRLSWGMVFQVQPLSDDTKLKAIQMRASAR 182 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 G E ++V RFLL R M L LD LD+AS++A+RK+TIPF+KE+ Sbjct: 183 GLEFSDEVARFLLHHASRNMNDLTSLLDTLDQASLSAKRKVTIPFIKEV 231 >UniRef50_B1ZWG9 Chromosomal replication initiator protein dnaA n=5 Tax=Bacteria RepID=B1ZWG9_OPITP Length = 467 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELS 68 L TF +F G N+ + A + Q ++++ G G++HL+HA + Sbjct: 130 TLNPRNTFETFVVGSNNQMAHAAALAVAQAPAQAYNPLFIYGDTGLGKTHLMHAIGHAIL 189 Query: 69 QRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ +K T + H+ ++ ID+++ +AG E + Sbjct: 190 RNNPDARVAYLSTEKFTNEFIQALQENSLTKFRQRYRHVDVLLIDDVQFLAGKERIQEEF 249 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + ESGK +++++ DR ++ L SR +WG +Q E +L L+ + Sbjct: 250 FHTFNDLFESGK-QVVLSSDRRASEIQKLESRLVSRFEWGLPADIQAPDFETRLAILRSK 308 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A F+LP + F+ + + + +R L L ++ S + L + + +L+ Sbjct: 309 AACMKFDLPAPILNFIAQNISKNIRRLEGALIKVASYSALTSKPLDLATTEMLLQ 363 >UniRef50_B0VMK0 Chromosomal replication initiator protein dnaA n=17 Tax=Acinetobacter RepID=DNAA_ACIBS Length = 465 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 16/235 (6%) Query: 13 LPDDETFASFWPGDNSSLL----AALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELS 68 L TF+ F G ++ + + L ++L+ G G++HL+ A L Sbjct: 129 LNPQFTFSLFVEGRSNQMAAETCRKVLTQLGASQHNPLFLYGPTGLGKTHLMQAVGNALL 188 Query: 69 Q--RGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 Q V Y+ + V E L L+ +D+I +AG E + Sbjct: 189 QAKPNARVMYMTSESFVQDFVSSLQKGKVEEFKKNCRSLDLLLVDDIHLLAGKEASLVEF 248 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N +L+ K ++++T DR P++L P L SR WG ++P E +++ L + Sbjct: 249 FYTFNALLDESK-QIILTSDRYPKELTELDPRLVSRFSWGLSVGVEPPDIETRIEILLKK 307 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 A G +LP + F+ +++ +R L L+++ S + + V+E LK Sbjct: 308 AENSGVDLPRNCALFIAQQVVANVRELEGALNKVVAISRFKGAPIDLDVVRESLK 362 >UniRef50_B1MW29 Chromosomal replication initiator protein dnaA n=9 Tax=Leuconostocaceae RepID=B1MW29_LEUCK Length = 448 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 17/235 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L ++ TF F G + A+ + ++ ++ G G++HL+ A S+ Sbjct: 109 LNENFTFDKFVVGTGNENAYAIARAVAEDPGRVYNPYLIYGGVGLGKTHLMQAIGNAYSK 168 Query: 70 RGD--AVGYVPLDKRTWFVPE-----------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 + Y + E + L+ ID+I+ +G E + Sbjct: 169 TTPSARIKYATAEDFLNDFTESLRAGEGATAAFKKEYRTVDLLLIDDIQFWSGKEKVQEE 228 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N + ++GK ++++T D+ P ++ L SR + G +Q ++ L+ Sbjct: 229 FFNTFNVLTKTGK-QIIMTSDKLPTEIVDLQSRLTSRFEAGISMDIQKPDLPTRVAILKN 287 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A G +P DV + ++D +RTL T + + + T ++IL Sbjct: 288 LAETDGLTIPNDVLELIADKIDSNIRTLEGTFHRFEAMLRFRNKPATKETAQQIL 342 >UniRef50_A1VUS9 Chromosomal replication initiator protein dnaA n=6 Tax=Betaproteobacteria RepID=A1VUS9_POLNA Length = 465 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 103/239 (43%), Gaps = 15/239 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAAC 64 + L TF + G + + A + + ++++ G G++HL+HA Sbjct: 125 AFKNRLNSALTFDTLIEGTANRMGRAAALHVASSLGQLYNPLFIYGGVGLGKTHLMHAIG 184 Query: 65 AELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELW 113 +L V Y+ ++ V + + L L+ ID+++ +A + Sbjct: 185 NKLMADNPAAKVLYIHAEQFVSDVVKAYQRKTFDDFKERYHSLDLLLIDDVQFLANKDRT 244 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F+ + +L + K+ +++T D P+ L L SR D G ++P E ++ Sbjct: 245 QEEFFNAFEALL-TKKSHIVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAI 303 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +A G LPE+V F+ K + +R L L ++ S + ++++I +E L+ Sbjct: 304 LIRKADADGAVLPEEVAFFVAKNVRSNVRELEGALRKIQAYSRFSHKEISIQLAREALR 362 >UniRef50_B9KA42 Chromosomal replication initiator protein dnaA n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KA42_THENN Length = 450 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 15/235 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G +S + + ++++ G G++HLL + + Q Sbjct: 107 PLNPAYTFENFVVGPGNSFAYHASLEVAKNPGKYNPLFIYGGVGLGKTHLLQSIGNYIVQ 166 Query: 70 RGD--AVGYVPLDKRTWFVP---------EVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 R V Y+ +K + E + + ++ ID+I+ + G + + Sbjct: 167 REPDLRVMYITSEKFLNDLVDSMKEGKLAEFREKYRKKVDVLLIDDIQFLIGKTGVQTEL 226 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + +SGK +++I DR P L L SR G + KL+P E + + Sbjct: 227 FHTFNELHDSGK-QIVICSDREPHMLKEFQDRLISRFQMGLVAKLEPPDRETRKSIARKM 285 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ELPE+V F+ + +D +R L + +L T R++ + +LK Sbjct: 286 LEVEEGELPEEVLDFVAENVDDNLRRLKGAIIKLLVYKETTGREVDLKEAIALLK 340 >UniRef50_D0RQH3 Chromosomal replication initiator protein dnaA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQH3_9RICK Length = 462 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 107/238 (44%), Gaps = 18/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQ--EHSGYIYLWAREGAGRSHLLHAACAELSQ 69 + F SF G+++ L + + + H +Y++ G G++H+L+A +L Q Sbjct: 122 RIDPRLNFESFVTGESNQLAFSAAKRVTESLGHYNPLYIYGGVGLGKTHILNAIGNQLKQ 181 Query: 70 RGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ ++ + + + + ++ +D+I+ I+G E+ + F Sbjct: 182 MDKKVIYLSAERFMYQFVKSIKNKDTHKFKEIFRNADVLILDDIQFISGKEVTQEEFFYT 241 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +LE +++++I+ DR P +L+ + SRL G + +QP +L+ L+ R Sbjct: 242 FNSLLE-NQSQVVISCDRSPNELDRIQDRIKSRLSGGLVVDVQPPDIGLRLEILKKRCLA 300 Query: 181 RG------FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + +++ F+ +R + L+++ ++ + T+ K ILK Sbjct: 301 EKNHFGNEILINDEILSFISNEFKSSVRDMLGVLNRVIASARIQNKTPTLQDAKLILK 358 >UniRef50_Q5FAJ2 Chromosomal replication initiator protein dnaA n=28 Tax=Neisseriaceae RepID=DNAA_NEIG1 Length = 518 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L AA + + +L+ G G++HL+ A EL Sbjct: 181 NLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPFFLYGSTGLGKTHLVQAVGNELL 240 Query: 69 QRGD--AVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ D R + L+ ID+I+ I G + Sbjct: 241 KNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF 300 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F LYN K +L++T D P ++ L SR WG +L+P E ++ LQ + Sbjct: 301 FYLYNHFHNE-KKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRIAILQKK 359 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 A G + ++ F+ + +R L +++ +S R + I + L+ Sbjct: 360 AEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGASSRFMNRPVIDIDLARTALQ 415 >UniRef50_A8F346 Chromosomal replication initiator protein dnaA n=6 Tax=Thermotogaceae RepID=DNAA_THELT Length = 444 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 15/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G N+ + + + ++L G G++HLL A L + Sbjct: 101 PLNPILTFENFVVGPNNMFAYSTCLEVAKNPGKYNPLFLHGGVGLGKTHLLQAIGHYLFK 160 Query: 70 RGD--AVGYVPLDKRTWF---------VPEVLDGMEH-LSLVCIDNIECIAGDELWEMAI 117 V Y+ ++ V E D + + ++ +D+++ + G + + Sbjct: 161 HEPDMRVIYLTSERFLNELVDSIKKNRVQEFRDKFRNKIDVLLLDDVQFLIGKTGIQTEL 220 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F +N + GK ++++ DR P+QL L SR G + K++ +E + Q Sbjct: 221 FHTFNELYNEGK-QIVVCSDRDPQQLEKFQDRLVSRFQMGVVTKIEKPDEETCFKIAQKM 279 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 A+L EL ED+ + + K +R L L +L + K+ + E+L + Sbjct: 280 AQLENAELQEDILKLISKNFSDNLRRLRGALVKLIMYQQISGEKVDLQKAFELLAI 335 >UniRef50_Q6MRS1 Chromosomal replication initiator protein dnaA n=1 Tax=Bdellovibrio bacteriovorus RepID=DNAA_BDEBA Length = 471 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 17/236 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAEL 67 L + TF++F G NS A + + +Y++ G G++HLLHAA + Sbjct: 131 TLNSELTFSTFVVGKNSEFAHAACYNVARNPGADDYNPLYIYGPVGMGKTHLLHAAGNHI 190 Query: 68 SQR--GDAVGYVPLDKRTWF---------VPEVLDGME-HLSLVCIDNIECIAGDELWEM 115 ++ + Y+ ++ + + + ++ +D+++ IA E + Sbjct: 191 REQYQHLRITYISAERFMNECISAIRRHEMDKFRQKYRENSDILLVDDVQFIARGEAVQE 250 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F N ++S K ++++ DR P+ ++ +RL+ G I + E ++ L+ Sbjct: 251 EFFHTVNSFIDSRK-QVILASDRMPKDIHGLEDRSRTRLERGLIADITMPDLETRIAILR 309 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +A LPEDV ++ + R +R L L ++ S + VK IL Sbjct: 310 YKAEKYNVRLPEDVVNYIARISKRSIRELEGNLKKVKMFSELQGLPIDHELVKRIL 365 >UniRef50_B7J203 Chromosomal replication initiator protein dnaA n=20 Tax=Borrelia RepID=DNAA_BORBZ Length = 487 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 85/225 (37%), Gaps = 15/225 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L TF +F G N+ L + + ++ G G++HLL + + + Sbjct: 144 LKKRYTFENFIIGPNNKLAYNASLSISKNPGKKYNPCLIYGGVGLGKTHLLQSIGNKTEE 203 Query: 70 --RGDAVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + YV + E +L ++ ID+I + E + +F Sbjct: 204 LHHNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELF 263 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + E K +L+ T DR P +L L SR G + + E + ++ +A Sbjct: 264 HTFNALYEDNK-QLVFTCDRSPSELTNFTDRLKSRFTRGLNVDISKPNFELRAAIVEKKA 322 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLT 223 G +P+++ + +++ +R L + +L ++ Sbjct: 323 EEDGINVPKNILNLVAQKVTTNVRDLEAAVTKLKAYIDLDNIEID 367 >UniRef50_D1AIS7 Chromosomal replication initiator protein dnaA n=2 Tax=Fusobacteriaceae RepID=D1AIS7_SEBTE Length = 452 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 23/251 (9%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHL 59 Q L L F +F G + L A + Q + ++ G G++HL Sbjct: 99 MDTQKKLINNLNQRYRFENFVVGKGNELANAACIAISQNPGIVYNPLLIYGGSGLGKTHL 158 Query: 60 LHAACAELSQR--GDAVGYVPLDKRTWF------------VPEVLDGMEHLSLVCIDNIE 105 +HA + + V Y + V D L ++ ID+I+ Sbjct: 159 MHAVGNAILDKDPNKKVLYCTSENFNNEFINSLRAGQFANVQNFRDKFRTLDVLLIDDIQ 218 Query: 106 CI-----AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 G E F +N + E GK +++++ DR PR++ + SR D G Sbjct: 219 FFEKVFGQGTGSVEEEFFHTFNTLQELGK-QIIMSSDRLPREIRNLSKRIESRFDSGLSV 277 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR 220 +Q E +L L+ A + + ++V F+ + +R L L ++ S ++ Sbjct: 278 DVQKPDYETRLAILKNIADSKSVIISDEVLEFISSSISSNIRELEGALTRVIARSTLLRK 337 Query: 221 KLTIPFVKEIL 231 +T+ V+E L Sbjct: 338 AITLQLVQEDL 348 >UniRef50_C9LEK1 Chromosomal replication initiator protein dnaA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEK1_9BACT Length = 460 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 103/245 (42%), Gaps = 17/245 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRS 57 + P + L L D TF +F G + L + + +E +L+ G G++ Sbjct: 115 DAPRRERLDPQLNRDYTFKAFVEGRANKLARVIGLAIAKEPGKPAFNPFFLYGPSGVGKT 174 Query: 58 HLLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIEC 106 HL++A + + V YVP + + + + + ++ ID+I+ Sbjct: 175 HLVNAIGLRILESQPERRVLYVPAHLFKTQYTDSVLHNTINDFIHFYQTIDVLIIDDIQE 234 Query: 107 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLS 166 I + A F ++N + ++G+ +++IT DR P + +R WG + +++ Sbjct: 235 IT-TAKTQQAFFHIFNHLQQNGR-QIIITCDRAPVDFEGIEERMLTRFKWGTVTEMEKPD 292 Query: 167 DEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPF 226 + L + + G + P DV ++ ++ +R L ++ + S+ + Sbjct: 293 VALRRAILTAKIKRDGLKFPPDVIDYIANNVESSVRELQGIVNSIMAYSVVDNCDICQDL 352 Query: 227 VKEIL 231 V++++ Sbjct: 353 VEKVV 357 >UniRef50_D1W4X4 Chromosomal replication initiator protein dnaA n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W4X4_9BACT Length = 470 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 106/245 (43%), Gaps = 18/245 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSH 58 P Q L L TF ++ GD++ L ++ + + + ++++ G G++H Sbjct: 124 QPQQ--LDPNLNPHLTFNNYIEGDSNKLPRSVGMSIAEHPNKTQFNPMFIYGPSGCGKTH 181 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECI 107 L++A Q V YV V + ++ + + L+ +D+I+ Sbjct: 182 LINAIGMLSKQLYPQKRVLYVSARLFQVQYTNAVLQNSVNDFINFYQTIDLLIVDDIQEW 241 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 + F ++N + +GK R+++ DRPP L L +R G I +L+ + Sbjct: 242 MTATKTQDTFFHIFNHLFRNGK-RIILASDRPPVDLKGMNERLLTRFACGLIAELEKPNL 300 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + + L + + G ++P+DV +++ + + +R L ++ L S+ + + Sbjct: 301 QLCIDILNSKIQRDGLQIPDDVVQYIAQTANGSVRDLQGVINSLLAYSVVYNSVVDMRLA 360 Query: 228 KEILK 232 + +++ Sbjct: 361 QRVIQ 365 >UniRef50_Q1QEW6 Chromosomal replication initiator protein dnaA n=3 Tax=Psychrobacter RepID=Q1QEW6_PSYCK Length = 481 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 94/233 (40%), Gaps = 14/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQ----NVLRQEHSGYIYLWAREGAGRSHLLHAACAELS 68 L D TF +F G +++L + ++++ G G++HL+H+ Sbjct: 146 LNPDFTFETFVTGKSNNLAYKACYELGKRQSKNRHNPLFIYGPSGLGKTHLMHSVAHRYL 205 Query: 69 QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + Y +K + + ++ + L+ +D+I +AG Sbjct: 206 KNNQNFYYFTSEKFINQLVYSLRNNKIEDFKKKIKKVDLLIVDDIHVLAGKTKSSNEFLT 265 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L+ SG +L++ DR P Q+ SR WG + P + ++Q LQ +A Sbjct: 266 LFADF-TSGDKQLILASDRHPSQMTEFDERFRSRFSWGLTVAVDPPEIDTRVQILQRKAA 324 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 G LP++ F+ + + +R L L+Q+ + +T+ V+ LK Sbjct: 325 SYGMSLPKECALFIAQNVVSNVRRLEGALNQVFANANLTGAPITLEMVQYALK 377 >UniRef50_C8N934 Chromosomal replication initiator protein dnaA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N934_9GAMM Length = 444 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 17/240 (7%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH----SGYIYLWAREGAGRSHLLHAA 63 L D F +F +++ A + H S + ++ G G+SHL+HAA Sbjct: 102 PFESNLNSDYQFHNFVAAPSNNEAFAAAERVSGGHFFADSNPLLIYGGTGLGKSHLMHAA 161 Query: 64 CAELSQRGD-AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELW 113 L + G AV Y+ ++ + + + + ID+++ + G Sbjct: 162 GNALRRNGRTAVMYMNAEQYVNEFLAALAGKTQKAFSNRLRSVDALLIDDVQFLGGKTQS 221 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F +N +++ K ++++T DR P+++ L SR G ++ E + Sbjct: 222 QAEFFHTFNELIDK-KRQIIMTCDRYPKEIEGLEARLKSRFGAGLTVSIRAPEPETRFAI 280 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS--ITAQRKLTIPFVKEIL 231 L+ +A+ + F LP+DV F+ + ++ +R L L ++ + T+P + L Sbjct: 281 LKSKAKEQNFPLPDDVAYFIAENIESNVRDLEGALKKVIFQCQVLKKNEPATVPIAQAAL 340 >UniRef50_C9PTA5 Chromosomal replication initiator protein dnaA n=3 Tax=Prevotella RepID=C9PTA5_9BACT Length = 469 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 108/239 (45%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAAC 64 L L +TF+++ GD++ L ++ + + + ++++ G G++HL++A Sbjct: 127 LDPQLNPHQTFSNYIEGDSNKLSRSVGLSIAEHPNTNQFNPMFIYGPSGCGKTHLVNAIG 186 Query: 65 AELSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + Q V Y+ + + + + ++ +D+++ A + Sbjct: 187 VQTKQLYPQKRVLYISAHLFQVQFVNAVLKNATNDFIKFYQTIDMLIVDDVQTWASADKT 246 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F ++N + +GK R+++ DRPP +LN L +R G I +L+ + + + Sbjct: 247 QETFFHIFNHLFRNGK-RIILASDRPPVELNDMSDRLITRFSCGIIAELEKPNVQLCVDI 305 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L + R G ++P +V +F+ + + +R L ++ L S+ + + + ++K Sbjct: 306 LNAKIRRDGLKIPAEVTQFIAETANGSVRDLEGVINSLMAYSVVYNSDIDMRLAERVIK 364 >UniRef50_UPI0001C311AD chromosomal replication initiator protein DnaA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311AD Length = 453 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 TF F GD + L A + + ++++ G G++HLLHA Sbjct: 106 DESFNPKYTFDQFVIGDGNRLAHAAALAVAELPGQAYNPLFIYGPPGLGKTHLLHAIANY 165 Query: 67 LSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + GD V Y ++ T V E ++ ID+++ + E Sbjct: 166 VRSYGDGMTVRYTTIEAFTNRFITALRSSSVEEFKRRYRDTDILLIDDVQFLQSKAKTEE 225 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F +N + E+G ++L++T DR PR +N L R + G + ++ ++ L+ Sbjct: 226 EFFHTFNALYETG-SQLVVTCDRMPRDMNALAERLRERFESGLVTDIRAPDLATRMTILR 284 Query: 176 LRARLRGFEL-PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R + G +L D + R+ +R L L ++ R + V +L Sbjct: 285 KRVQHDGVQLASPDAIEPIADRITTNIRALQGALIRVVAFHSLTGRPIDRALVTHVL 341 >UniRef50_C5R9Y2 Chromosomal replication initiator protein dnaA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9Y2_WEIPA Length = 467 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 17/236 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L + F +F D + A+ + + + ++ G G++HL+ A ++ + Sbjct: 130 LNPEFRFETFVSSDENREAYAVAQAVADKPGTQWNPLLIYGGVGLGKTHLMQAIGNKVLE 189 Query: 70 R--GDAVGYVPLDKRTWFVPE-----------VLDGMEHLSLVCIDNIECIAGDELWEMA 116 R V ++ + E L+ +D+++ +AG E + Sbjct: 190 RTPNANVKFITTEDFINDFTEALRRGQKETEAFKREYRSTDLLMVDDVQFLAGKEKIQEE 249 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F+ +N I ++++T D+ P+++ L +R G + ++ L+ Sbjct: 250 FFNTFNAITRENH-QIVLTSDKLPKEIPGLEMRLVTRFGQGYSANITKPDLPTRVAILRN 308 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ L +P DV + +D +R L +Q+ + +T+ + IL+ Sbjct: 309 KSDLENLSIPNDVIDEIAAAVDTNVRDLEGVFNQVVGKMRFSNVPVTVETARTILE 364 >UniRef50_D0W8I1 Chromosomal replication initiator protein dnaA n=4 Tax=Neisseriaceae RepID=D0W8I1_NEILA Length = 559 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 16/236 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF + G + L AA + + +L+ G G++HL+ A EL Sbjct: 222 NLSRDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPFFLYGSTGLGKTHLVQAVGNELL 281 Query: 69 QRGD--AVGYVPLDK---------RTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ D R + L+ ID+I+ I G + Sbjct: 282 KNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF 341 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F LYN K +L++T D P ++ L SR WG +L+P E ++ LQ + Sbjct: 342 FYLYNHFHNE-KKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRVAILQKK 400 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK-LTIPFVKEILK 232 A G + ++ F+ + +R L +++ +S R + + + L+ Sbjct: 401 AEAAGISIEDEAALFIANLIRSNVRELEGAFNRVSASSRFMNRPVIDMDLARTALQ 456 >UniRef50_Q3ZAJ3 Chromosomal replication initiator protein dnaA n=5 Tax=Dehalococcoides RepID=Q3ZAJ3_DEHE1 Length = 445 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 TF SF G + L A Q +Y++A G G++HLL A Sbjct: 102 SPFNPRYTFESFIVGSCNRLAHAASLAATQNPGKSYNPLYIYAAAGLGKTHLLQAIGHLA 161 Query: 68 SQRGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 + YV ++ T E + L+ +D+++ I G E E +F Sbjct: 162 NLNRRKALYVSGEQFTTDFISSIRNGQTEEFRARYRDVDLLLLDDVQFIGGKEQTEECLF 221 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 +N + S + +++I+ D PP+ L L SR +WG +++P ++ +L+ LQL+A Sbjct: 222 HTFNDLHNSNR-QIVISADSPPKSLPQLAERLRSRFEWGLTIEIEPPDEKTRLELLQLKA 280 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 G EL D +L + + +R L +L+++ + + +T L Sbjct: 281 EQSGTELNMDTLEYLAQEVKHNIRELEGSLNRVLAYARLLRATITPDLAARAL 333 >UniRef50_A2RH74 Chromosomal replication initiator protein dnaA n=4 Tax=Lactococcus lactis RepID=DNAA_LACLM Length = 454 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 99/240 (41%), Gaps = 16/240 (6%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 L L + F +F G + A + + ++++ G G++HL+HA Sbjct: 112 PLVSGLNEKYNFENFVQGPGNRWTLAAAIAVADKPGDTYNPLFIYGGAGLGKTHLMHAIG 171 Query: 65 AELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELW 113 ++ + YV + + + +L L+ +D+++ + E Sbjct: 172 NQILTDNPTARIKYVSSENFVNDYVNATRKNQMESFENTYRNLDLLLLDDVQFFSDKEGT 231 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + F+ +N + + G +++++T DR P++LN L SR WG + E ++ Sbjct: 232 KNEFFNTFNALYDKG-SQIVLTSDRIPQELNNLEDRLVSRFSWGLTTDITAPDYETRMAI 290 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL-TIPFVKEILK 232 L +++ E P + ++ ++D +R L L++++ + + I + L+ Sbjct: 291 LLIKSESSHLEFPSETLSYIAGQIDSNVRELEGALNRVEFVARANGISIVDIETASQALR 350 >UniRef50_Q1Q0S4 Chromosomal replication initiator protein dnaA n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0S4_9BACT Length = 495 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 14/236 (5%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAE 66 L L F G N+ L + +E +++ G G++HLL Sbjct: 155 ALGLNKGLLLEDFVIGPNNRLAYTAALEMIKEEYPPFNPLFIHGNVGVGKTHLLVGIWNR 214 Query: 67 LS-QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + ++ Y+ +K T + ++ + ID++ ++ + + Sbjct: 215 VRKEQTVNAVYMSAEKWTNEFIYALQKGKMESFRQRYRNVDVFLIDDVHFLSNKQGVQEE 274 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 +N + +S K R++ D P+Q++ +LASR G + +++ +L L+ Sbjct: 275 FLHTFNALYDSSK-RIIFASDAHPKQISQLKENLASRFMSGMVARIERPEYATRLLILRT 333 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +A PE+ ++ ++ D +R + L L + RK+ I FVK++LK Sbjct: 334 KASKYDVYFPEEALEYIAEKFDDSVREVESALVTLTAHARFNDRKIDIAFVKDVLK 389 >UniRef50_C8PZ52 Chromosomal replication initiator protein dnaA n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ52_9GAMM Length = 446 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 15/245 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGR 56 + T Q S Y+ TF F ++ + ++ + ++++ G G+ Sbjct: 101 VKTEQQRSFQ-YIDPHFTFDQFVTAKSNQIAYSICRETANNLGQSKNNPLFIYGATGLGK 159 Query: 57 SHLLHAACAELSQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECI 107 +HL+ A E+ ++G + Y DK T + E D ++ L+ ID+I I Sbjct: 160 THLMQAIAHEILKQGKSFYYFTSDKFVNQLVHSLRTQKIDEFKDKIKKADLLIIDDIHVI 219 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 AG + L N + K ++++ D+ P L L SRL WG L+P Sbjct: 220 AGKQKSSEQFLLLLNDFMSKNK-QVILASDKHPSALTDFDERLKSRLAWGVAVALEPPEL 278 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E ++Q LQ +++ + LP++ F+ + + +R L L+++ S + + + V Sbjct: 279 ETRIQILQKKSKAQEVILPKECAIFIAQHIIANVRELEGALNKVLAISRLLNQPIHLELV 338 Query: 228 KEILK 232 + LK Sbjct: 339 QMALK 343 >UniRef50_Q04HR6 Chromosomal replication initiator protein dnaA n=14 Tax=Leuconostocaceae RepID=DNAA_OENOB Length = 450 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 L + TF ++ GD + L + + ++ + ++ G G++HL+ A Sbjct: 111 DYQLNQNFTFDTWVIGDANELATSAAMAVSEQPGRQYNPLLIYGSSGLGKTHLMEAIGNR 170 Query: 67 LSQRGDA--VGYVPLDKRTWFVPEVLDG---------MEHLSLVCIDNIECIAGDELWEM 115 L + V Y+ D + E++ L+ +D+I+ + G + ++ Sbjct: 171 LKELQPDAIVRYITTDDFMNDWVNAISKKTTADFTSTYENVDLLLVDDIQMLQGKDRFQE 230 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F+++N+I +S K ++++T D P+ + L SR G Y +Q +L L+ Sbjct: 231 EFFNIFNKITKSQK-QIVMTSDVLPKDIPGLNARLVSRFMQGVAYDIQKPDFPTRLAILK 289 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ G + + +++D +R L + L + R + + ++IL+ Sbjct: 290 NKSEEVGISIDNQTLTLIAEQIDTNVRELEGAFNTLTLMARA-GRPINVSNAQKILE 345 >UniRef50_A9BEM2 Chromosomal replication initiator protein dnaA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEM2_PETMO Length = 454 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 16/240 (6%) Query: 8 SLPLY-LPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAAC 64 L L + TF SF G+++ + + + ++++ G G++HLLHA Sbjct: 95 PLKLSEFNPEFTFDSFVTGNSNRIAYYSALEVCKNPGKYNPLFIYGDVGLGKTHLLHAIG 154 Query: 65 AELSQRGD--AVGYVPLDKRTWFVPE---------VLDGME-HLSLVCIDNIECIAGDEL 112 L + V YV + + + + ++ + ID+++ + G Sbjct: 155 NFLMENAPDLKVKYVTAEDFMNQMMDGIRASDMENFRERFRRNVDFLLIDDVQFLIGKNT 214 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + +F +N + S K +++I DR P +L P L SR + G I +Q K Sbjct: 215 VQSELFHTFNSLFNSRK-QIVICSDRTPDELATFHPRLISRFEMGLITDIQAPDKATKYL 273 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + A++ +L +DV +L + +D +R L + L S + I K I+ Sbjct: 274 IAKKMAQMISLQLTDDVAYYLAEHVDTNLRKLRGAIMNLLLQSQISGAPANIESAKTIVN 333 >UniRef50_B9Y5K6 Chromosomal replication initiator protein dnaA n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5K6_9FIRM Length = 458 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 91/222 (40%), Gaps = 18/222 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L D TF +F G ++ + ++++ G G++HLL+A +S Sbjct: 115 NLIQDYTFDNFVVGGSNRESHSAALACAYNPGQFFNPLFIYGNSGLGKTHLLNAIGNYVS 174 Query: 69 QR--GDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y + + E + M L ++ +D+I+ +AG E Sbjct: 175 EHAPDKKVYYTTSEDFVNAVVNSIKNGQIQEFKEEMNDLDVLLVDDIQFLAGKEKSHETF 234 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++N ++ + K ++ +T DR P ++ L SR G + E + L+++ Sbjct: 235 FYIFNELV-NNKKQICLTSDRHPTEIKGLEERLISRFSSGLSVGVDSPEFETSVAILKVK 293 Query: 178 ARLRGFEL---PEDVGRFLLKRLDREMRTLFMTLDQLDRASI 216 + + +DV ++ +++R L L++L SI Sbjct: 294 LEKQSVDPSIIDDDVLAYIASNFSQDVRKLEGALNRLLFYSI 335 >UniRef50_Q1N6W0 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N6W0_9GAMM Length = 232 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 140/231 (60%), Gaps = 1/231 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 M QL L + L D+ TF +F+ + + Q + I+++ G G SHLL Sbjct: 1 MQVVEQLPLGVQLRDEATFENFYALQSQEVKLQAQLAAIGKGEQSIFIYGESGCGTSHLL 60 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC E Y+PL++ + P V + +E+L L+ +DN++ IAG WE A+F L Sbjct: 61 QAACHEAQTHDLNSVYLPLEELVEYSPAVFESLENLPLIALDNMQAIAGLPAWEEAVFHL 120 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR+ ++G +++ + L + L DL SRL WG +Y+L L++EDK+ AL+LRA Sbjct: 121 FNRVRDNGG-HIIMAANDSIEGLGIKLADLKSRLHWGLVYELPELTEEDKMAALKLRAHN 179 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG EL +DV ++++++++ M +F L+QLD+AS++A+RK+T PFVK+++ Sbjct: 180 RGLELGDDVAKYVVRQMEGHMDKMFEALNQLDKASLSAKRKVTRPFVKDVM 230 >UniRef50_B0N234 Chromosomal replication initiator protein dnaA n=4 Tax=Bacteria RepID=B0N234_9FIRM Length = 448 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 96/243 (39%), Gaps = 19/243 (7%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAAC 64 L TF +F G ++ + ++ +++++ G G++HLL+A Sbjct: 101 PFRDNLNRTLTFDNFVVGSSNRMAQNAALLVSTNPGSNFNPLFIYSNPGLGKTHLLNAIG 160 Query: 65 AELSQRGD--AVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + + Y+ E+ D ++L ++ ID+I+ + E Sbjct: 161 NYAKEVNPALRIRYITSKDFVDEVIGAMKGRDGDEIYDKYKNLDILLIDDIQFLFNKEKS 220 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 F ++N ++ + K +++IT D+ P +L L SR + G + + P E Sbjct: 221 SEIFFHIFNELINNNK-QIVITSDKMPEELQGIESRLISRFNSGLSFGIDPPEFETARAI 279 Query: 174 LQLRARLR---GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ-RKLTIPFVKE 229 L+ + + +DV F+ +++R+L L +L SI + + F E Sbjct: 280 LEKKIENLDNPSLIIQDDVVDFMANHYCKDIRSLEGALKRLFFCSIMNHTNNIDMAFALE 339 Query: 230 ILK 232 K Sbjct: 340 SFK 342 >UniRef50_Q1V1G7 Chromosomal replication initiator protein dnaA n=4 Tax=root RepID=Q1V1G7_PELUB Length = 470 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 104/238 (43%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREGAGRSHLLHAACAELSQ 69 + ++ F +F G ++ L + + H +Y++ G G++HLL++ L + Sbjct: 126 RIDPNKRFDNFITGTSNKLAYEASMKVSENISHYNPLYIYGGVGMGKTHLLNSIGLSLKE 185 Query: 70 RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 + V ++ ++ + + + + ++ ID+I+ + G E + F Sbjct: 186 KN-KVMFISAERFMYQFVKSIKSNDMVKFKEYFRNTDILLIDDIQFMNGKEAMQEEFFHT 244 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +L+ G ++++I+ DR P +L+ + SR G + +Q E + + ++ + Sbjct: 245 FNALLDKG-SQVIISADRAPNKLSRIQDRIKSRFAGGLVVDIQKPDYELRNKIVRQKTEE 303 Query: 181 RGF------ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + E++ +F+ + +R L ++++ S + + VK +LK Sbjct: 304 LNIFYSNQVNISEEIQKFISTEITTSIRELVGAINRVVSFSRIYNKVPNLSEVKVVLK 361 >UniRef50_C2MAU1 Chromosomal replication initiator protein dnaA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAU1_9PORP Length = 475 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 104/246 (42%), Gaps = 17/246 (6%) Query: 2 NTPAQLS-LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGR 56 + P QL L +FAS++ G+++ +++ + ++ +++ G G+ Sbjct: 128 SEPRQLPDFDSQLKPQLSFASYYQGESNRTASSIARSIAEKPGQGALNPCFIYGPSGVGK 187 Query: 57 SHLLHAACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIE 105 +HL HA + + V YV + ++ + + ++ ID+I+ Sbjct: 188 THLCHAIGLRIRELYPELKVLYVSSHMFEMQYVAATRANTTNDFINFYQQVDVLLIDDIQ 247 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 + + ++ F ++N + GK ++++T D P L L SR+ +++ Sbjct: 248 GLIAKKKTQLTFFQVFNHLYMLGK-QIVLTSDTAPVNLAGLEERLISRIAGSLTIEVERP 306 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 + + + L+ ++ G LP ++ ++ + + +R L L + +T Sbjct: 307 DYDLRKEYLRHKSEESGSILPREMIDYIARTVTSSIRGLQGVFFSLITRAAVEGCDITSS 366 Query: 226 FVKEIL 231 FVK+I+ Sbjct: 367 FVKKIV 372 >UniRef50_Q5ZRS8 DnaA-like family protein n=6 Tax=Legionella RepID=Q5ZRS8_LEGPH Length = 245 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 100/233 (42%), Positives = 147/233 (63%), Gaps = 1/233 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + QL+L + L D+ T F G+N+ L L +L + +YLW +G+G+SHLL Sbjct: 14 VKMNKQLALAIKLNDEATLDDFNWGNNTLLQQQLIEMLSFKADRLLYLWGPKGSGKSHLL 73 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A C + + Y+PL + P+ ++G+E +L+CID+I IA D WE A+F L Sbjct: 74 QACC-QAINLTQSAIYLPLAFLKEWGPQSIEGLEDQTLICIDDINTIANDSAWEEALFHL 132 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YN+I +S ++ L+I+G++PP + ++ L DL SRL WG + +L L+D++K+ L++RA Sbjct: 133 YNKIKDSERSLLIISGNQPPIKCDIKLADLRSRLSWGLVIQLNELNDDEKINTLKMRAAK 192 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFELPE VG FLL R R M L+ L+QLD AS A RK+TIPFVK ILK+ Sbjct: 193 RGFELPESVGHFLLNRCSRNMHDLYEILNQLDDASWEAHRKITIPFVKNILKI 245 >UniRef50_C8P211 Chromosomal replication initiator protein dnaA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P211_ERYRH Length = 471 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 25/256 (9%) Query: 1 MNTPAQLSLPLYLP-----DDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYLWARE 52 + P Q +P+ + ++TF +F G ++ + ++++ Sbjct: 114 VQVPVQPQIPVVIRNDGIAPNQTFDNFVVGPSNKESHSAALGCAYRPGQFYTPLFIYGNS 173 Query: 53 GAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCI 101 G G++HLL+A + + V Y + + + M +L ++ I Sbjct: 174 GLGKTHLLNAIGNYIKKLNPDARVLYTSSSDFVRQVANSIQNRTIEDFKEQMYNLDVLLI 233 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 D+I+ +AG E F ++N ++ K +++IT DR P ++ L SR G Sbjct: 234 DDIQFLAGKEKSHEIFFHIFNELI-YNKKQIVITSDRLPTEIKGLEDRLISRFSSGLSVG 292 Query: 162 LQPLSDEDKLQALQLRARLRGFE---LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + E L L+L+ + + + EDV ++ +++R L L++L SI Sbjct: 293 VDSPEFETSLAILELKIKHKSVDPGLFDEDVLSYIASNFSKDVRMLEGALNRLLFFSIEF 352 Query: 219 QRK--LTIPFVKEILK 232 + + I K Sbjct: 353 SQNDHIDINIAMNAFK 368 >UniRef50_B2RGM5 Chromosomal replication initiator protein dnaA n=2 Tax=Porphyromonas gingivalis RepID=DNAA_PORG3 Length = 473 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 16/239 (6%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG----YIYLWAREGAGRSHLLHAAC 64 L F +F+ + + + ++ + +++ G G++HL HA Sbjct: 133 FDTQLNSRLNFRNFYQSECNYVARSVAEAIAASPGNTPMNPFFIYGASGVGKTHLCHALG 192 Query: 65 AELSQRGDA--VGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 + + V YV + + + + + ++ ID+I+ + G + Sbjct: 193 LRVREMHPRLKVLYVSSHLFEMQFTTAARMGTINDFIAFYQQVDVLIIDDIQWLIGKKKT 252 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 ++A F ++N + GK ++++T D+PP LN L +R+ K++ + + + Sbjct: 253 QLAFFQVFNHLYMLGK-QIVLTSDKPPVDLNGMEERLVTRMAGATCVKIERPDLKLRREI 311 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 LQ R G L E V F+ + + +R L TL L S+ +++ + F K I++ Sbjct: 312 LQQRTLQSGVRLDESVLNFIAENVCDNVRELEGTLVSLITNSVVVGKEIDLTFAKRIVR 370 >UniRef50_C7MEK7 Chromosomal replication initiator protein dnaA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEK7_BRAFD Length = 565 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 19/241 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAE 66 L TF +F G ++ A + + + ++++ G G++HLLHA Sbjct: 215 DSRLNSKYTFDTFVIGSSNRFAQAAASAVAETPAKAYNPLFIYGGSGLGKTHLLHAVGHY 274 Query: 67 LSQRGDAVG--YVPLDKRTWFV------------PEVLDGMEHLSLVCIDNIECIAGDEL 112 V YV ++ T E + ++ ID+I+ + Sbjct: 275 AQSLYPDVVVRYVNSEEFTNEFINSVQSGQFGKAQEFQRRYRDIDILLIDDIQFLQRAPE 334 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 A F +N + S K +++IT D PP++L + SR + G + +QP E ++ Sbjct: 335 TMEAFFHTFNTLYNSDK-QIVITSDLPPKELGGFEDRMRSRFEMGLMTDVQPPDLETRIA 393 Query: 173 ALQLRARLRGF-ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ + E+P +V ++ + +R L L ++ +++ + + + +L Sbjct: 394 ILRKKVAQENTGEVPHEVLEYIASHIATNIRELEGALIRVQALHSLSRQPMDVTLAESVL 453 Query: 232 K 232 K Sbjct: 454 K 454 >UniRef50_C3JBQ8 Chromosomal replication initiator protein dnaA n=2 Tax=Bacteria RepID=C3JBQ8_9PORP Length = 471 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 18/244 (7%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSH 58 P Q L TF SF G+++ + +L + E +++ G G++H Sbjct: 127 NPTQW--DTKLLPPFTFDSFIRGESNDVALSLARRICVEPGDAMMNPFFIYGPPGVGKTH 184 Query: 59 LLHAACAELSQRG--DAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECI 107 +++A E+ ++ V YV + VP+ + + + ++ +D+I+ + Sbjct: 185 MMNAMGWEILRQHSDLRVLYVTTLQFVQQFTAASKNKKVPDFIKYYQQIDVLLLDDIQEL 244 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 G E + A F+++N + GK ++++T DR N + SR+ +++ Sbjct: 245 EGKERSQQAFFEIFNHLYSLGK-QIVLTSDRSVSDFNALSERIVSRMAGSLTAQIKRPDL 303 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + + L A G L E+V F++K +R + L + ++ + + F Sbjct: 304 CLRREILNKLASQGGVVLTEEVSDFIVKNASHSVREIDGVLSSIFLSASVTGSPIDLSFS 363 Query: 228 KEIL 231 +EIL Sbjct: 364 REIL 367 >UniRef50_C9LP67 Chromosomal replication initiator protein dnaA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP67_9FIRM Length = 541 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 33/249 (13%) Query: 15 DDETFASFWPGDNSSLLAALQNVLR--------------------QEHSGYIYLWAREGA 54 DD TF +F G+ + + + + + ++++ G Sbjct: 188 DDYTFDNFVHGNCNEIAFQSAHAIALSCEEYTDSPDTNYSKKKPEASNYNPLFIYGPSGL 247 Query: 55 GRSHLLHAACAELS--QRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDN 103 G++HLL A + + +V +V + T + E + + + ID+ Sbjct: 248 GKTHLLLAISNYVKTHRPDLSVLFVTSENFTNELIESIRSGKMQEFREKYRTVDYLLIDD 307 Query: 104 IECIAG-DELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 I+ G E M IF+ +N I ++ ++ T DR P L L +R G I + Sbjct: 308 IQFFNGTKESSRMEIFNTFNAIADNDNY-IITTSDRTPSDLKDFHERLITRFSSGMIAHI 366 Query: 163 QPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 P E LQ +A ++ E+V F+ ++ +R L Q+ L Sbjct: 367 SPPDFEICSIILQKKAERSHIDMSEEVISFIAGNVNSSVRELEGAFKQVVGYCQIKNVPL 426 Query: 223 TIPFVKEIL 231 T+ ++ L Sbjct: 427 TLENARDAL 435 >UniRef50_Q058F9 Chromosomal replication initiator protein dnaA n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNAA_BUCCC Length = 437 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 98/236 (41%), Gaps = 15/236 (6%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHA 62 Q+ L + F +F G ++ L + ++L+ G G++HLLHA Sbjct: 96 QIYLHSEINKKYQFHNFIQGQSNQLAYYSSYKFTKNLKNFYNPLFLYGNTGLGKTHLLHA 155 Query: 63 ACAE--LSQRGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDE 111 + + + V Y+ + + + + + ++ +D+I+ + + Sbjct: 156 IGNKFLIKNKKKKVIYIHSENFIQNMVNSLKNNSIDKFKNYYRSIDVLLLDDIQFFSNKK 215 Query: 112 LWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKL 171 + +F+ +N + + +++T D P ++ L SR WG + P + ++ Sbjct: 216 KSQEELFNTFNTLFNKQQK-IVLTADCYPEYISGITEQLKSRFKWGLTISINPPELKTRI 274 Query: 172 QALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 + L +A L +V +++ K++ +R L L ++ SI + K+TI V Sbjct: 275 KILLHKAYENKILLSYEVAKYIAKKIFSNVRELEGILKKIQILSILNKEKITINLV 330 >UniRef50_B7IF65 Chromosomal replication initiator protein dnaA n=2 Tax=Thermotogaceae RepID=DNAA_THEAB Length = 438 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 17/237 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAE 66 L L TF +F G+ + + ++ I+L++ G G++HL A Sbjct: 96 LITPLNPKYTFENFVVGNFNRFAYNVFLEASKKPGYYNPIFLYSGVGLGKTHLAQALGNF 155 Query: 67 LSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEH-LSLVCIDNIECIAGDELWE 114 L + V Y+ + + E + ++ ID+I+ + G + + Sbjct: 156 LLENDPDLKVAYLTSEDFMNEMFYAIKNGTTEEFREKYRKKADILIIDDIQFLIGIKSAQ 215 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 + +F +N I E+GK +++I DR P++L + SR G + K++ + ED + Sbjct: 216 VELFHTFNAIHEAGK-QIIICSDRTPQELKDFHSRMISRFQMGLLVKIENPTKEDLFKIG 274 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + ++L+G E+ +++ ++ + R + + +L L + + IL Sbjct: 275 KKISKLKGVEINDEIIDYISS-IYDNPRLIHGAILKLIAYKNLYGS-LNLSIAQSIL 329 >UniRef50_A9NE65 Chromosomal replication initiator protein dnaA n=2 Tax=Acholeplasma laidlawii RepID=DNAA_ACHLI Length = 452 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L TF SF G ++ + + + Y++ G G++HL+ A + Sbjct: 103 NLNSTYTFDSFVVGKSNMFAFRMAMKVADQPGAVANPFYIFGDVGLGKTHLMQAIGNYIL 162 Query: 69 QRG--DAVGYVPLDKRTWFV-----------PEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + YV D E + + ++ +D+I+ +A +M Sbjct: 163 DNDVEKRILYVKADNFIEDFVSLLSRNKNKTEEFNAKYKDIDVILVDDIQIMANASKTQM 222 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 F L++ + + K +++IT D+P QL +P L +R + G +Q E ++ L+ Sbjct: 223 EFFKLFDYLYLNNK-QIVITSDKPASQLTNIMPRLTTRFEAGLSVDIQIPELEHRISILK 281 Query: 176 LRAR--LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + E+ ED+ F+ + +R + L +L + T ++T+ V+E L Sbjct: 282 RKTATLDANLEVSEDILTFIASQFAANIREMEGALIRLISYAQTFNLEITMNVVEEAL 339 >UniRef50_C3XDF5 Chromosomal replication initiator protein dnaA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDF5_9HELI Length = 440 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 99/233 (42%), Gaps = 14/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQR 70 + + +F SF G+ + + + + ++ G G++HLL+A C + +R Sbjct: 103 INKNVSFNSFIVGECNKFAFETAKEIAKNQGKWNPLLIYGNTGLGKTHLLYAICNAVYER 162 Query: 71 GD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + Y+ + + + + ID+++ ++ + ++ F+ Sbjct: 163 TPNAKIVYITAESMFNEYRHRIQNNTMQHFRERFRSCDYLLIDDVQFLSNTDKFQEEFFN 222 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 +N I++ G ++++T D+ P+ ++ L SR G + K++ + K+ ++ + Sbjct: 223 TFNVIVQEGG-QIVMTSDKAPKLIDKLEKRLKSRFAGGMMTKIESPELDMKINIIKQKCA 281 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L L ++ F+ +L +R + T+ + +T+ VK ILK Sbjct: 282 LNNITLEPNIINFIATQLHDNIREIEGTIIDIYANMSIMNIPITLEIVKNILK 334 >UniRef50_Q4ZQ54 DnaA family protein n=24 Tax=Gammaproteobacteria RepID=Q4ZQ54_PSEU2 Length = 261 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 104/231 (45%), Positives = 147/231 (63%), Gaps = 4/231 (1%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSHLL 60 P QL L + L DD TF +++PG N++ L ++ + IYLW ++G GR+HLL Sbjct: 30 PIQLPLSVRLRDDATFVNYYPGANAAALGYVERLCEADAGWTESLIYLWGKDGVGRTHLL 89 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 AAC Q G+ Y+PL + E+ D +E LVC+D+++ I G WE A+F L Sbjct: 90 QAACLRFEQLGEPAVYLPLAEVIDEGIELFDHLEQYELVCLDDLQAIVGKPDWEEALFHL 149 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +NR+ +SG+ RLLI + PR+L + LPDL SRL +++++ LSDEDKL+ALQLRA Sbjct: 150 FNRLRDSGR-RLLIAASKSPRELPVKLPDLKSRLTMALVFQMRGLSDEDKLRALQLRASR 208 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L +DVG F+L R R M LF L++LD+AS+ +RKLTIPF+KE L Sbjct: 209 RGLHLTDDVGHFILTRGTRSMSALFELLERLDQASLQEKRKLTIPFLKETL 259 >UniRef50_D0GPF1 Chromosomal replication initiator protein dnaA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPF1_9FUSO Length = 453 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 96/239 (40%), Gaps = 20/239 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWAREGAGRSHLLHAACAELS 68 L +F GDNS + + ++++ G G++HL+ A + Sbjct: 112 GLNVRNRLDNFIVGDNSRMAYNACLAVLENEAPVYNPLFIYGGSGLGKTHLMQAVGNAIL 171 Query: 69 QRGD--AVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIA-----GDEL 112 +R V Y ++ + + D +L ++ +D+I+ G Sbjct: 172 ERNPEKRVLYTTTEEFSNEFIAAIKEGRIKNFRDTFRNLDVLLLDDIQFFERIFGRGMGD 231 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 E F +N++ ESGK ++++ DR P+ + L SR G ++ E + Sbjct: 232 TEEEFFHTFNKLQESGK-QIIMISDRYPQDIKNLSKRLESRFISGLSTEILEPGYETRKA 290 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L+ ++ E+ +++ ++ + + +R L L ++ + K+T+ V++ L Sbjct: 291 ILENIVEIKNIEIDDNILEYIAESVSSNVRELEGILTLINARAKLLNEKITLQQVQDEL 349 >UniRef50_Q2NKC5 Chromosomal replication initiator protein dnaA n=4 Tax=Candidatus Phytoplasma RepID=DNAA_AYWBP Length = 504 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 20/239 (8%) Query: 14 PDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQR 70 +F +F G +++ + + +E +Y++ + G G++HL+ A + + Sbjct: 162 NPKYSFDNFVVGKSNNFAFKISKKIAEEKKVTTNPLYIFGKSGIGKTHLIQAIGNHILKN 221 Query: 71 ---GDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V YV D + + + + L+ +D+I+ +AG +M F Sbjct: 222 THSSKKVLYVKADGFIEEFTNQLRKAKMEDFNEKYRDIDLLLVDDIQIMAGATRTQMEFF 281 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L++ + + K +++IT D+ +L + L SR + G + +Q +L L+ + Sbjct: 282 KLFDYLYLNQK-QIVITSDKQASELKNIMSRLTSRFEAGLMVDIQSPDFNHRLNILKKKI 340 Query: 179 RL----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 ++ +DV + +R + L +L + T + I E L+L Sbjct: 341 LEFEPQNTLKIKKDVLDLIASSFVNNVREMEGALLRLLNYAQTFGYDIDINIANEALEL 399 >UniRef50_A9KBZ5 DnaA-related protein n=7 Tax=Coxiellaceae RepID=A9KBZ5_COXBN Length = 260 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 2/233 (0%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + QL L + L ++ TFA+F+ G+N +LL AL +L + +IYLW GR+HLL Sbjct: 22 LTMIDQLPLRVQLREETTFANFYGGNNITLLKALNELLEGKGESFIYLWGEPSVGRTHLL 81 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 A C ++ R Y+PL K P +L G+E L+CID+I+ + WE A+ Sbjct: 82 QACCHTMNNRSLEAMYLPL-KTPQLAPSILQGLESKPLICIDDIDAVLSQPDWEEALLHF 140 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+ ES + +L+I G+ P QLN L DL SRL WG ++++ L+D +K++ALQ+RA Sbjct: 141 YNRVRES-QVKLVIAGNYVPPQLNCQLADLRSRLSWGLVFQVIGLTDAEKIKALQMRAHD 199 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RGFEL ++VG+FLL+ R+M LF LD+LD+AS+ AQRKLT+PFVKE+L + Sbjct: 200 RGFELSDEVGQFLLRHYPRDMSALFNLLDKLDQASLIAQRKLTVPFVKEVLNI 252 >UniRef50_D1BQ77 Chromosomal replication initiator protein dnaA n=3 Tax=Veillonella RepID=D1BQ77_VEIPT Length = 524 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 94/251 (37%), Gaps = 23/251 (9%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 N P LSL L F ++ G+ + + + + ++++ G G++H Sbjct: 170 NVPVDLSL-SNLNPAYRFDNYVTGNANRIPFGAAQNVAEFPGGDYNPLFIYGPSGLGKTH 228 Query: 59 LLHAACAELSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECI 107 L+HA + + V + + E + ++ ++ ID+I+ + Sbjct: 229 LMHAIGNAIKENHPHMKVMSITSENFMNIFVETLQRNQGKLFRNTFRNIDVLMIDDIQFL 288 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 E + +F+ +N +L + K ++++T D P + L SR G I ++ Sbjct: 289 ESRESTKTELFNTFNELLNNNK-QIVLTSDTMPNDMEQFEDRLRSRFQAGYIATMENPDL 347 Query: 168 EDKLQALQLRARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-- 220 E ++ + R + D ++ + +R L +L + QR Sbjct: 348 ETRIAIFRSLLEREYKKNRIIRIDNDSINYVALQFSENVRVLQGAFTKLIGTASIDQRLE 407 Query: 221 KLTIPFVKEIL 231 + + + K L Sbjct: 408 SIDLEYTKHAL 418 >UniRef50_A6LIY2 Chromosomal replication initiator protein dnaA n=1 Tax=Thermosipho melanesiensis BI429 RepID=DNAA_THEM4 Length = 437 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 98/237 (41%), Gaps = 17/237 (7%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAE 66 L L TF + G+ + + + I+L++ G G++HL A Sbjct: 95 LITPLNPKYTFENLVVGEFNKFAYNVFLEASKNPGFYNPIFLYSGVGLGKTHLAQALGNY 154 Query: 67 LSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEH-LSLVCIDNIECIAGDELWE 114 L + V Y+ ++ + E + ++ ID+I+ + G + + Sbjct: 155 LLETDPDMKVAYLTSEEFMNEMFSAIKNGNIDEFREKYRKKADILIIDDIQFLIGIKSAQ 214 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 +F +N I E+GK +++I DR P++L + SR G + K++ S ED + Sbjct: 215 TELFHTFNTIHEAGK-QIIICSDRTPQELKDFHSRMISRFQMGLLVKIEKPSSEDLFKIG 273 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + + ++ E+ +++ +++ ++ R + + +L L + + IL Sbjct: 274 KKISEMKNVEIDDEIIKYI-SKIYDNPRLIHGAILRLIAYRNLYG-TLNLSIAESIL 328 >UniRef50_Q87FC6 Chromosomal replication initiator protein dnaA n=8 Tax=Bacteria RepID=DNAA_XYLFT Length = 439 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 20/242 (8%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAG------RSHLLH 61 L F +F G ++ L A Q+ ++HL+ Sbjct: 98 PFNGNLDTHYNFDNFVEGRSNQLARAAAWQAAQKPGDRT--HNPLLLYGGTGLGKTHLMF 155 Query: 62 AACAELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGD 110 AA + Q V Y+ ++ + + + + ID+I+ AG Sbjct: 156 AAGNVMRQVNPTYKVMYLRSEQFFSAMIRALQDKSMDQFKRQFHQIDALLIDDIQFFAGK 215 Query: 111 ELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDK 170 + + F +N + + GK ++++T DR PR++N P L SRL WG + P E + Sbjct: 216 DRTQEEFFHTFNALFD-GKQQIILTCDRYPREVNGLEPRLKSRLAWGLSVAIDPPDFETR 274 Query: 171 LQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 + +AR RG +P++V + K++ +R L L+ L + R +TI F +E Sbjct: 275 AAIVLAKARERGATIPDEVAFLIAKKMHSNVRDLEGALNTLVARANFTGRAVTIEFSQET 334 Query: 231 LK 232 L+ Sbjct: 335 LR 336 >UniRef50_UPI0000D537C1 Chromosomal replication initiator protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D537C1 Length = 393 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 97/238 (40%), Gaps = 19/238 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREGAGRSHLLHAACAELSQ 69 + ++ F +F + L + + +Y++ G G++HLL+A EL Sbjct: 121 RVDPNKRFENFITSSCNKLAFEASTKITENSTQYNPLYIYGGVGMGKTHLLNAIGYELKN 180 Query: 70 RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 R V ++ ++ + + + ++ ID+I+ + G E + F Sbjct: 181 RS-KVMFISAERFMYQFVKAIKSNDMVKFKEYFRDTDVLLIDDIQFMNGKEAMQEEFFHT 239 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N +L+ G +++++T DR P +L + SR G + +Q + + + ++ + Sbjct: 240 FNALLDKG-SKIVLTSDRAPNKLARMQERIKSRFSGGLVVDIQKPDLKLRKRIIENKVEE 298 Query: 181 ------RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 L +++ FL + +R L ++L S ++ + K +LK Sbjct: 299 FKKLYSDQVNLSKELEDFLSSEISNSVRELIGAFNRLISFSRIYKKTPNLSETKIVLK 356 >UniRef50_A1S6W5 Regulatory inactivation of DnaA Hda protein n=9 Tax=Shewanella RepID=A1S6W5_SHEAM Length = 241 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 114/233 (48%), Positives = 159/233 (68%), Gaps = 1/233 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNS-SLLAALQNVLRQEHSGYIYLWAREGAGRSHLL 60 + P QLSLP++LPDDETF S++P + L+ AL++ + IYLW +GR+HL+ Sbjct: 9 HPPLQLSLPVHLPDDETFTSYYPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLI 68 Query: 61 HAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 HAACA ++ Y+PL +L+G+E L+CID+++ +AG LWE AIFDL Sbjct: 69 HAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDL 128 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 YNR+ E + L+++ P + LPDL SR+ WG Y+LQP+ D++KL ALQ RA + Sbjct: 129 YNRVAEQKRGSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAM 188 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG +LPEDVGRFLL R+ R++RTLF LD+LD+AS+ QRKLTIPFVKE+L+L Sbjct: 189 RGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQRKLTIPFVKEMLRL 241 >UniRef50_Q0ABB5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABB5_ALHEH Length = 245 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 4 PAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAA 63 QL+L + D + SF G N L A++ ++L+ + G+SHLL AA Sbjct: 13 VQQLALDIRWTDIASLDSFVAGANQQALDAVRRAAMGFGDRLLFLYGQGPVGKSHLLQAA 72 Query: 64 CAELSQRGDAVGYVPLDKRTWFVP-EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 C E +RG Y+PL++ P VL GME + L+ +D+++ +AG+ WE F L+N Sbjct: 73 CREAGERGFKAAYLPLNEFQGMPPGSVLAGMESMDLLALDDLQVLAGEADWEEHFFYLFN 132 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R SG ++++ DR P L+L LPDLASRL WG +L+PL D KLQ LQ RA RG Sbjct: 133 RTRASGG-HMILSADRRPVDLSLVLPDLASRLQWGLTLRLEPLDDVGKLQGLQARAAARG 191 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 ELP+D GRFLL R R++ LF LD+LD AS+ AQR+LTIPFV+++L Sbjct: 192 LELPDDTGRFLLSRYARDLGGLFQLLDRLDGASLAAQRRLTIPFVRQVL 240 >UniRef50_A5CY30 Chromosomal replication initiator protein dnaA n=2 Tax=sulfur-oxidizing symbionts RepID=A5CY30_VESOH Length = 430 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 95/240 (39%), Gaps = 21/240 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE----HSGYIYLWAREGAGRSHLLHAACAEL 67 L +D TF + G+ + + + + ++ + G G++HL+ AA Sbjct: 87 PLFEDYTFNNLVLGNANQMAYGATKQIAENIKTSPYNPFIIYGKSGLGKTHLMQAAGHLA 146 Query: 68 SQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 ++ + YVPL + + + + L+ +D+I IAG E + Sbjct: 147 KEKNPNIKIIYVPLMDFVRNITSSLRHNTIENIKNFYQSTDLLLVDDIHLIAGKEKSQEE 206 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F ++N + SGK +++ T D+PP+ + L +R G L P E + L Sbjct: 207 FFHIFNFLF-SGKKQIIFTCDQPPKNIKSLEDRLKTRFSQGLNLHLTPPELEMRAAILLK 265 Query: 177 RARLR--GFELPEDVGRFLLKRLDREMRTLFMTLDQLDR---ASITAQRKLTIPFVKEIL 231 +++ + L ED F+ + +R L L +L S ++ ++ L Sbjct: 266 KSQNKRININLTEDTALFIASHIASNIRDLEGALLKLKAFVDFSKINHSFISKEIIESAL 325 >UniRef50_D2LFZ6 Chromosomal replication initiator protein DnaA n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFZ6_RHOVA Length = 497 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 24/243 (9%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQE------HSGYIYLWAREGAGRSHLLHAAC 64 L TF SF G + L A + + +Y+ AR G G++HLLHA Sbjct: 149 SPLDPRYTFQSFVVGSPNRLAHAAAFQVAESTPEQPLKYNPLYIHARVGMGKTHLLHAIA 208 Query: 65 AELSQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELW 113 E+ R V Y+ ++ T P + + + L+ ID++E + G Sbjct: 209 WEMKARNPNAKVLYLTAERFMYSFAEALQTRDAPAFKEKLRTIDLLIIDDMEFLQGRTF- 267 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + N +++ GK ++++ D P L + SRL G + ++ L + +L+ Sbjct: 268 QQEFCHTLNSLIDGGK-QVVVAADCAPLLLESFDARMRSRLSGGLVAEMSALDFDLRLKI 326 Query: 174 LQLRARL-----RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 LQ RA RGFE+P DV +L +L R L + +L K+T+ + Sbjct: 327 LQRRAAEKISLSRGFEVPGDVLEYLATQLTENGRELEGAITRLHATWQLTGEKVTVDAAE 386 Query: 229 EIL 231 + Sbjct: 387 NTI 389 >UniRef50_B4U623 Chromosomal replication initiator protein dnaA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U623_HYDS0 Length = 444 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 103/254 (40%), Gaps = 32/254 (12%) Query: 8 SLPLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAAC 64 + + TF +F G + + + ++++ + G+G++HLL A Sbjct: 107 AFKEGISSKYTFDNFIVGKQNEVAYRASLEVATDENSIYNPLFIYGKVGSGKTHLLQAIG 166 Query: 65 AELSQRGDAVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEM 115 G +V Y ++ T + + + + ++ ID+I+ ++G E +M Sbjct: 167 NRAYSLGKSVIYTSMNDFTEEMVYYLKAGNIISFREKYKGVDILLIDDIQFLSGKERTQM 226 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 +F+++N + + K ++ D+ PR + L SR + G + + + D+ KL ++ Sbjct: 227 ELFNIFNYLFQYNK-HIVFASDKHPRDIKDISERLVSRFEGGLLVE-TSIDDQIKLSIIK 284 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ--------LDRASITAQ-------- 219 + ++ G + E + ++ R + + Q L+ + Sbjct: 285 QKIQIYGLNVDERLISYIKDNTTNNAREIEGLVLQIKAKGVSILEAYNSATHYNSTTVTN 344 Query: 220 --RKLTIPFVKEIL 231 ++++I +K+ + Sbjct: 345 TPKEISIDKIKKAV 358 >UniRef50_B7CCH8 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCH8_9FIRM Length = 452 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 24/246 (9%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH----SGYIYLWAREGAGRSHLLHAAC 64 L TF +F G++++ A + + L+ G G++HLLHA Sbjct: 103 LENKFNPSYTFENFVEGNSNAEAYAACLACCTQTTSHLFNPLMLYGNSGLGKTHLLHAMG 162 Query: 65 AELSQRGD--AVGYVPLDKRT--------------WFVPEVLDGMEHLSLVCIDNIECIA 108 L++ V Y+ V V + + ID+I+ + Sbjct: 163 NYLAKEHPECKVIYMYSGDLVSLLIEAMKTKNVHGNTVERVKEQLLDCDYFLIDDIQNLQ 222 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 + F +YN++++ T+++IT D P +++ L SR G + E Sbjct: 223 QHSSSQEIFFTVYNQLIQKN-TQIIITSDMHPSEISGLQSRLISRFVSGLTISISKPEFE 281 Query: 169 DKLQALQLRAR--LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ-RKLTIP 225 L+ + G + EDV +L + ++R L TL++L + + + Sbjct: 282 TSKAILKKKIEGREEGVNMSEDVIDYLAGKYSNDVRNLEGTLNRLIFNATLFNPDVIDMD 341 Query: 226 FVKEIL 231 F +++L Sbjct: 342 FARKVL 347 >UniRef50_A8UU23 Chromosomal replication initiator protein dnaA n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU23_9AQUI Length = 407 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 104/233 (44%), Gaps = 16/233 (6%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELS 68 L +F +F G+ + L + + ++++ G G++HLL A Sbjct: 87 GLNVKYSFNNFVVGEGNRLAYEVALEVANSPGSLYNPLFIYGGVGLGKTHLLQAIGNFCV 146 Query: 69 QRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 ++G V Y + T V E + + L+ +D+I+ ++G ++ F+ Sbjct: 147 EKGYHVVYKSANDFSEEMVEAIKTGSVKEFRNRYRSIDLLLLDDIQFLSGKTRTQVEFFN 206 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 ++N + K ++++ DR P++L L SR + G + ++ L + KL+ ++ + Sbjct: 207 IFNHMFLKEK-QIVLASDRHPKELKDVSDRLVSRFEGGLVVEIC-LDELTKLEIIKRKLC 264 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASI--TAQRKLTIPFVKEI 230 E+ + + L+++ +R + T+ L + ++K+++ +++I Sbjct: 265 ELKIEVQDRIVESLMEQTSNNVRDIEGTIRGLKLRGVEHLKRKKVSVNDLEKI 317 >UniRef50_O66659 Chromosomal replication initiator protein dnaA n=1 Tax=Aquifex aeolicus RepID=DNAA_AQUAE Length = 399 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 97/209 (46%), Gaps = 15/209 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L T +F G+ + L + + I+++ G G++HLL AA E + Sbjct: 79 LNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKK 138 Query: 70 RGDAVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 RG V Y D + E + + + L+ +D+++ ++G E ++ F + Sbjct: 139 RGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHI 198 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +N + K ++++ DR P++L+ L SR + G + +++ L ++ + + ++ + + Sbjct: 199 FNTLYLLEK-QIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKE 256 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLD 209 EL ++V +LL+ + +R + + Sbjct: 257 FNLELRKEVIDYLLEN-TKNVREIEGKIK 284 >UniRef50_Q47Z80 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Z80_COLP3 Length = 235 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAREGAGRSH 58 M AQL+L + LPDDETF SF N ++ L++ + + S YL+ G+SH Sbjct: 1 MKQVAQLTLMVQLPDDETFDSFKSDINQGVVTQLKSYIESQQSTPHSFYLFGLSSVGKSH 60 Query: 59 LLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L+HA+ +Q G + + + EVLDG+E + L+C+D+I IAGD W+ AIF Sbjct: 61 LMHASSTYAAQIGKSSVCLSCAELKQLPVEVLDGLEQIDLICLDDIHLIAGDTRWQQAIF 120 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 DL+NR+LE LLI+GD +QL + LPDL SRL WG +++P+ DE+K+ ALQ RA Sbjct: 121 DLFNRVLEQNNY-LLISGDESAQQLGISLPDLVSRLTWGLTEQVKPVDDEEKVIALQYRA 179 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG L ++V +FLL RL R+M +L +LD LD+ASI QRK+TIPF+KE+L L Sbjct: 180 TQRGLFLSDEVVKFLLNRLSRDMGSLINSLDVLDKASIQEQRKITIPFIKEVLTL 234 >UniRef50_B2UL60 Chromosomal replication initiator protein dnaA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL60_AKKM8 Length = 468 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 98/237 (41%), Gaps = 18/237 (7%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREGAGRSHLLHAACAELSQ 69 L D TF SF ++S + Q ++L+ + G G++HLL A E+ Sbjct: 129 LNDLYTFDSFVVYEDSRFAYQAGLSVAQSERALFNPLFLYGKSGVGKTHLLQAIGHEVLH 188 Query: 70 RGDA--VGYVPLDKRTWFVPEV------------LDGMEHLSLVCIDNIECIAGDELWEM 115 + + V YV ++ + ++ +D+++ I+G E Sbjct: 189 QDSSTNVVYVTGEQFANEFIDASRTQNGQSFTKLRRKYRKADVLLVDDVQFISGKEKTVE 248 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 ++ + + K ++I D ++ P LA+RL+ G +L D +L+ L+ Sbjct: 249 EFLHTFDELFHAHK-TIVICADAAACDISNLDPRLAARLESGLTVELNLPDDNARLEILR 307 Query: 176 LRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + G + +++ FL R+ + +R L L ++ + + I ++++L+ Sbjct: 308 SKRDRAGMNVSDEILEFLASRIQKSVRRLEGALLRVATFTSLSGDMPDIAKIEQLLR 364 >UniRef50_A4BSN5 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSN5_9GAMM Length = 244 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 92/227 (40%), Positives = 135/227 (59%), Gaps = 1/227 (0%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL+L + FA F G N+ +AAL+ + + + IYL+ G G+SHLL AAC Sbjct: 13 RQLALDFQWDERFDFAGFVAGPNAEAVAALELIGKGDRRRVIYLYGEPGVGKSHLLQAAC 72 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 E S G AV Y+PL + P +L +E + +V +D+++C+ W+ A F L+NR+ Sbjct: 73 GEASAWGRAVVYLPLRQLVNRSPRLLQELEGVDVVALDDLDCLTKAIEWQQAAFHLFNRL 132 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 ++G+ LL+ G R P +L L LPDL SRL + +L+ L DED + AL RA+ RG E Sbjct: 133 QDAGRE-LLMAGPRRPAKLGLALPDLVSRLQGVLVLRLEKLGDEDNVLALSRRAQRRGLE 191 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LP+ R+LL R+ F LD+ D AS+ AQR+LT+PFVK++L Sbjct: 192 LPKATARYLLNHCRRDTGYFFQLLDKFDAASLQAQRRLTVPFVKKVL 238 >UniRef50_Q3JBV7 Regulatory inactivation of DnaA Hda protein n=2 Tax=Nitrosococcus oceani RepID=Q3JBV7_NITOC Length = 232 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 2/232 (0%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVL-RQEHSGYIYLWAREGAGRSHLLH 61 QL LP+ +F +++ + A + + ++ L G G++HLL Sbjct: 2 VTQQLPLPIGDSGAPSFENYYLAAANRESVAAVERCGQGKGDRFLCLRGPSGVGKTHLLL 61 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 AAC +Q+G+ V YVPL + PE+L G+E + V ID+I+ IAG WE ++ LY Sbjct: 62 AACQIAAQKGERVAYVPLKRAVIMAPEILGGLEVAAFVAIDDIDHIAGYRHWEESLLHLY 121 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 N + E G+ RLL+ P L+ LPDL SRL WG Y+LQPL D K ALQ +A R Sbjct: 122 NLLQE-GRGRLLLASTDKPSTLHWLLPDLRSRLGWGLGYQLQPLDDHQKHAALQFQAAKR 180 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 G ELP++V FLL+ +R+M +L L QL+RAS+ AQR+LT+PFV+++L + Sbjct: 181 GLELPDEVAGFLLRHSERDMHSLSSILAQLERASMAAQRRLTVPFVRQVLDI 232 >UniRef50_A0YE57 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YE57_9GAMM Length = 252 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 94/228 (41%), Positives = 143/228 (62%), Gaps = 3/228 (1%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA 65 QL L + L DD TF +F+ GDN+ LL L+ L Y+YL+ REG+GRSHLL AAC Sbjct: 26 QLPLAVQLRDDATFDNFYSGDNALLLDTLRKQLSD-GERYVYLFGREGSGRSHLLQAACH 84 Query: 66 ELSQRGDAVGYVPLDKRTWFVPEVL-DGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + G Y+PL + + PE L DG+E+ SLVC+D+++ + LW+ +F L+NR+ Sbjct: 85 HADKNGSNAIYLPLSELGEYPPEELFDGLEYQSLVCLDDVDAVIDKGLWQRQLFHLFNRL 144 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 ++ + LLI+ R LN+ L DLASRL WG +++L L+D+ + ++LRA RG Sbjct: 145 SDA-QIPLLISARCAVRDLNIELQDLASRLSWGTVFQLHNLNDDQRTATIKLRAERRGLL 203 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 + ++V +++ R R+ + L LD LD AS+T QR+LT+PFVK+ + Sbjct: 204 MGDEVAQYIYNRCRRDTQALLSVLDTLDSASLTYQRRLTVPFVKKTMN 251 >UniRef50_UPI0000D52F8F chromosomal replication initiator protein DnaA n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F8F Length = 306 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 89/202 (44%), Gaps = 11/202 (5%) Query: 40 QEHSGYIYLWAREGAGRSHLLHAACAELSQR-GDAVGYVPLDKRTWF---------VPEV 89 + ++ G G++HL+ + ++ + +V YV +K + ++ Sbjct: 1 SNPFNPLMVYGGVGLGKTHLIQSIGNKIINKSNSSVYYVTSEKFANQFIDSLKENKLKDL 60 Query: 90 LDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPD 149 ++ ++ + ID+I+ G + + F ++N++ + K ++++ D+ P +L+ Sbjct: 61 INFYVNIDCLIIDDIQFFKGKDKTQEVFFHIFNQLNLNNK-QIILAADKSPVELDGLEKR 119 Query: 150 LASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLD 209 L SR G +L+ + +L L + + + +++ ++ ++D +R L L Sbjct: 120 LVSRFKSGLTVELEKPDYQTRLDILNYKIQNENLSINKEIVEYIAFQVDTNIRELEGVLV 179 Query: 210 QLDRASITAQRKLTIPFVKEIL 231 L S + ++I K I+ Sbjct: 180 SLLAHSTITKEDISIELTKSII 201 >UniRef50_Q15SY5 Regulatory inactivation of DnaA Hda protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SY5_PSEA6 Length = 237 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 95/236 (40%), Positives = 143/236 (60%), Gaps = 5/236 (2%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ----EHSGYI-YLWAREGAGRS 57 QLSL + L D ETF SF G+N L+ L+++L + ++ ++ ++ G G+S Sbjct: 1 MSKQLSLAVNLRDTETFDSFIVGENLHLVHRLKSLLNKTLNTKNQPWLTFVSGDHGVGKS 60 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HLL++ C + + Y+ + + PEVLDG+EH L+C+D+ + + + W++A+ Sbjct: 61 HLLYSLCHKAQSANVSAVYLSFKDKQQYSPEVLDGLEHSQLICLDDADALQDSQTWQIAV 120 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR+ E G++ +++ + P LNL L DLASRL WG + L LSDE + AL R Sbjct: 121 FDLLNRVKELGRSHVVVCANGGPTSLNLQLADLASRLAWGVSFTLASLSDEGRCVALLTR 180 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 AR RG +PE V +L+ R+M +L TLD+LD+ S+ QRKLTIPFVKE L L Sbjct: 181 ARQRGLVMPEKVAMYLVNHWQRDMPSLMNTLDKLDQLSLQQQRKLTIPFVKEALNL 236 >UniRef50_P34028 Chromosomal replication initiator protein dnaA n=9 Tax=Spiroplasma RepID=DNAA_SPICI Length = 450 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 101/246 (41%), Gaps = 25/246 (10%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLR---QEHSGYIYLWAREGAGRSHLLHAA--- 63 L ++ TF +F GD++ + + ++++ G G++HLLHA Sbjct: 103 NLAYYENYTFENFVRGDSNHEAMQAALAVALDLGKKWNPLFIYGDSGLGKTHLLHAIENK 162 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLDG-----------MEHLSLVCIDNIECIAGDEL 112 E+ + + V Y+ D+ ++L+ + + ID+I+ +A Sbjct: 163 VNEIYKTNNRVKYLKADEFGKIAMDILNQGHEIIEAFKTSYDIYDCLLIDDIQLLAKRNK 222 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 F ++N +E K +++IT D+ P L + SR +G L E L+ Sbjct: 223 TNELFFHIFNSYIEKNK-QIVITSDKYPDDLGGFEARIISRFSYGLSIGLDSPDFETALK 281 Query: 173 ALQLRAR---LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK---LTIPF 226 L+ + + G E+ F+ + ++R L + +L ++ ++ +T+ Sbjct: 282 ILEQKLKHQNNLGL-FSEESLEFIALNFNSDVRKLEGAIKRLLFLAVMNKKPNEIITLAD 340 Query: 227 VKEILK 232 V++ K Sbjct: 341 VEKAFK 346 >UniRef50_A0LE53 Chromosomal replication initiator protein dnaA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=DNAA_SYNFM Length = 450 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 23/249 (9%) Query: 4 PAQLSLP-------LYLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAREG 53 P Q++ TF F G + A + + +YL + G Sbjct: 93 PRQIAFSDVVKCVGPAFNPRFTFDHFVVGGCNQFAYAAAMGMANNQQLYNQSVYLLSDTG 152 Query: 54 AGRSHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGMEH-LSLVCI 101 G+SHL HA L R V YV ++ + + ++ + Sbjct: 153 LGKSHLTHAVGNYLRNRKPELRVQYVTTEQFANEMIFSLKNGNMEAFKNKFRTGCDVLLL 212 Query: 102 DNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYK 161 + IE ++G E + + + +++ GK +L TG+ P+ + +L SRL G + Sbjct: 213 EKIEFLSGKEKIQKELVYTLDELMDRGK-TVLCTGNAYPKDIPKLNSELQSRLGGGLLAP 271 Query: 162 LQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 + + +++ ++ ++ +P +V +L R+ ++R L L L S + Sbjct: 272 IDKPDFKTRIEIIKRKSHTENIRVPMEVVEYLADRITGDVRQLESCLVGLMAKSNILRTP 331 Query: 222 LTIPFVKEI 230 +T+ +E+ Sbjct: 332 ITLDLAREV 340 >UniRef50_Q604L7 DnaA domain protein n=1 Tax=Methylococcus capsulatus RepID=Q604L7_METCA Length = 232 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 139/230 (60%), Gaps = 1/230 (0%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 Q+ L + +TF ++W G N+ A + R E +YLW G G++HL++A Sbjct: 1 MAQQIPLHFAVDPLQTFEAYWAGPNAEAAEAARRSARGEGDTLLYLWGDTGLGKTHLVNA 60 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 AC E G + +PL P VL+GME+ +LVC+D+I+ IAG + WE +F L+N Sbjct: 61 ACREAFHNGRSAACLPLALIGECGPAVLEGMENQNLVCLDDIDTIAGRDDWERQLFGLFN 120 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 + ++G LLIT PP +L + LPDL +RL WG + +L PL+DE KL AL+ RA + G Sbjct: 121 AMRDAG-NTLLITATAPPAELPVALPDLKTRLAWGLVLRLHPLTDEHKLAALERRAGMLG 179 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 +L VGRFLL R+M +L L++LD AS+ A+R+LT+PF+K L+ Sbjct: 180 LDLSPRVGRFLLSHCRRDMASLQALLEELDHASLAAKRRLTVPFIKGYLE 229 >UniRef50_A8RAI5 Chromosomal replication initiator protein dnaA n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAI5_9FIRM Length = 459 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 95/243 (39%), Gaps = 19/243 (7%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAA 63 + + + TF SF G N+ A ++++ G G++HLLHA Sbjct: 114 ILFEDKINPEYTFDSFVVGKNNREAHAASLSACYYPGKFNNPLFIFGNSGLGKTHLLHAI 173 Query: 64 CAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 + + V Y+ + V EV + + + ID+I+ + Sbjct: 174 GNYIKENRPEDKVLYIYSEDFVTLLIEAMKNKNVEEVKEKICSADYLLIDDIQRL-KQST 232 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F++YN+++ K +++IT D P +L L SR G + E Sbjct: 233 SQELFFNMYNKLIRDNK-QIVITSDIHPTELKGIENRLISRFSSGLSVSVGSPEFETAKA 291 Query: 173 ALQLRARLRG--FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ-RKLTIPFVKE 229 LQ + R + ++V +L R ++R L L++L SI + + F KE Sbjct: 292 ILQKKIEGRNEEILIEDEVLDYLATRFASDVRKLEGALNELFFKSILYNPDTIDLKFAKE 351 Query: 230 ILK 232 I K Sbjct: 352 IFK 354 >UniRef50_C6QHM2 Chromosomal replication initiator protein dnaA n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHM2_9RHIZ Length = 506 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 24/244 (9%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQ------EHSGYIYLWAREGAGRSHLLHAAC 64 L TF SF G ++ + A + + +Y+ + G G+SHLL A Sbjct: 161 SPLDPRYTFDSFVVGASNRMAHAGATQVAETVLTDAPGYNPLYIHSAVGLGKSHLLQAIA 220 Query: 65 AELSQRGDA--VGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELW 113 E+ +R + V Y+ ++ + E + ++ ++ ID++E + G E Sbjct: 221 WEVKRRAPSAQVLYLTAERFRYQFVEALRSSDPLAFKERFRNIHMLLIDDLEFLQG-ERT 279 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 E + N +L+ GK ++++ R P Q+ + SRL G + +L PL E +L+ Sbjct: 280 EQEFDHIINALLDGGK-QVVVASARAPNQIERLNERMRSRLQRGLVTELIPLDHELRLKV 338 Query: 174 L-----QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVK 228 L + RA F L DV L RL R L + +L + +T+ + Sbjct: 339 LEKRLGEKRAADPSFTLSRDVVDLLAMRLTENGRELEGAITRLYATWQYMRTPITLDIAE 398 Query: 229 EILK 232 +++ Sbjct: 399 TVIR 402 >UniRef50_B8GWW5 Chromosomal replication initiator protein dnaA n=8 Tax=Caulobacteraceae RepID=DNAA_CAUCN Length = 490 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 21/241 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELS 68 L + TF +F PG + A+ + H + G G++HLL+A E Sbjct: 148 GLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHLLNALAWEAM 207 Query: 69 QRGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 + V Y+ ++ + + L+ ID++ IAG + + + Sbjct: 208 RNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIAGKQSTQEEL 267 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 F ++ G R++ + DRPP + L S L G + L+P +L L+ + Sbjct: 268 FHTLTALVGEGG-RVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNLRLGILERK 326 Query: 178 ARLRGF------ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + G + +V +FL R +R L L+ L + ++T+ V+ IL Sbjct: 327 IQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMTLDEVQAIL 386 Query: 232 K 232 + Sbjct: 387 R 387 >UniRef50_Q2SKT0 DnaA family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKT0_HAHCH Length = 232 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 124/231 (53%), Gaps = 3/231 (1%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 + Q++L L + T +F+ + ++ ++Q + G++HLL Sbjct: 4 SENTQMALRLSNGESATLENFFEPPSGVVVQSIQRFFTASEDTVFSICGASAQGKTHLLM 63 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 AAC R + Y+ L + F VL G+E ++C D+I+ IAG WE A+F L+ Sbjct: 64 AACNGF--RSEKCFYLSLREYADFGVHVLAGLESFDVLCFDDIDAIAGQPEWEEALFHLF 121 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NR E G + LIT P Q LPDL +RL WG+ +L L + ++ L ++A Sbjct: 122 NRCRERG-CKWLITSAEAPSQTPFLLPDLKTRLAWGECVRLPELDEVQRINVLDIKAANI 180 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 GF L ++V +++++R R++ +L + L++LD+AS+ +R +T+PFVK ++ Sbjct: 181 GFRLSDEVKQYIMRRAPRDLSSLSLILERLDKASLVEKRPITVPFVKSVMN 231 >UniRef50_O86235 Uncharacterized protein HI1225.1 n=35 Tax=Pasteurellaceae RepID=Y122B_HAEIN Length = 231 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 107/231 (46%), Positives = 149/231 (64%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 QL LP++ DD T +F+ +N LL +L+ + Y+W +G+G++HLL A Sbjct: 1 MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRA 60 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 E YVPL K +F VL+ +E LVC+D+++ + G++ WE+AIFDL+N Sbjct: 61 FSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFN 120 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 RI SGKT LLI+ D+ P L++ LPDL SRL WG+IY+L L+DE K++ LQL A RG Sbjct: 121 RIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRG 180 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 F+L ++ FL+ RL R+M TLF LD LD+AS+ AQR LTIPFVK+IL L Sbjct: 181 FQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL 231 >UniRef50_A6C0G2 Chromosomal replication initiator protein dnaA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0G2_9PLAN Length = 505 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 97/244 (39%), Gaps = 16/244 (6%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSH 58 + P Q P ++F G ++ L ++ +++ G G++H Sbjct: 150 HKPTQ-PAPYKGRRFADLSTFITGKSNQLAYMATQQASEQPGALYNPLFIHGGVGLGKTH 208 Query: 59 LLHAACAELSQRGDA--VGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECI 107 LL ++ Q+ + V ++ + + +P ++ ++ ID+I+ Sbjct: 209 LLEGFYRKIRQQYPSLQVVFLTAESFGNYFSKALQERSLPGFRQRFRNVDVLIIDDIDFF 268 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 ++ + + ES +L+ + DR PR L +L +R G + +++ Sbjct: 269 ESKHNFQEELLHTIKHL-ESHGRQLIFSSDRHPRLLTKMSEELTTRFLSGLVCRVESPET 327 Query: 168 EDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 E +LQ + RA + + ++ +R +R L ++ L + ++K+T Sbjct: 328 ELRLQIARQRALQLKTPITDGALEYVARRFSHNVRELEGAMNCLQTWHVMTKQKITTTMA 387 Query: 228 KEIL 231 +++L Sbjct: 388 RQVL 391 >UniRef50_A1WUX7 Regulatory inactivation of DnaA Hda protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUX7_HALHL Length = 241 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 2/227 (0%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGY-IYLWAREGAGRSHLLHAAC 64 QL L + F PG+N + L + ++ +YL G G+SHLL AC Sbjct: 2 QLPLNIRWNAAAELDRFVPGENDTALRLVTDLADGLLEAPALYLHGPHGVGKSHLLQGAC 61 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 ++ G Y+PLD+ VLDG E L+ +D+++ + G + W+ A+F LYNR+ Sbjct: 62 RRVTTAGGVAVYLPLDQLLGHGAAVLDGWEQAQLIALDDLDALDGRDEWQGAVFHLYNRV 121 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 +E G RLL G +PP +L L LPDL SRL WG + ++ + L L+ RA RG E Sbjct: 122 VERGG-RLLFAGRQPPAELPLDLPDLRSRLGWGPVVAVREPDETTCLAILRQRAAQRGLE 180 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 LP+ R+L++RL RE+ L + LDRAS+ A R+LT+PFV+EIL Sbjct: 181 LPDATARYLIRRLPRELPGLLAFFETLDRASLAAGRRLTVPFVREIL 227 >UniRef50_Q6MEG8 Chromosomal replication initiator protein dnaA 2 n=14 Tax=Chlamydiales RepID=DNAA2_PARUW Length = 448 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 91/238 (38%), Gaps = 17/238 (7%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAE 66 + L ++ F +F G + + + + +++ G G++H+LH+ Sbjct: 110 DVKLNNNYRFENFIEGPTNQFVKSAAMGVALRPGQSYNPLFIHGGVGLGKTHILHSIGHY 169 Query: 67 LSQRGD--AVGYVPLDKRTWFVPE---------VLDGMEH-LSLVCIDNIECIAGDELWE 114 + + V + + + + + + ++ +D+I+ + +E Sbjct: 170 IKENHKKLRVQCITTEAFINDLVDSLRNKSVDRMKKFYRSEIDVLLVDDIQFLQNRLNFE 229 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 + + + G +++IT D+PP L +++ G + + E ++ L Sbjct: 230 EELSYTFEALKNKG-AQIVITSDKPPSLLK-LSERTIGKMEGGLVAHMGIPELETRVAIL 287 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 Q +A +G +P V F+ + + +R L +++L +T V L+ Sbjct: 288 QYKAEQKGLHIPHKVAFFIAEHIHNNVRQLEGAINRLSAHCRLLDLNITEELVSRTLR 345 >UniRef50_Q21MC1 Regulatory inactivation of DnaA Hda protein n=2 Tax=Alteromonadales RepID=Q21MC1_SACD2 Length = 239 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 135/235 (57%), Gaps = 4/235 (1%) Query: 2 NTPAQLSLPLYLPDDETFASFW--PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 +TP QLSL + L ++ TFA+F G N+ +AALQ E + +W G+G +HL Sbjct: 6 STPVQLSLGVSLREETTFANFLGAVGSNAQPVAALQQFAANEGEQNVLVWGAPGSGLTHL 65 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 L A C + G AV Y+PL + + DG+E + +VC+D I+ I G + WE +F Sbjct: 66 LQAVCHRAYEHGLAVQYLPLQDMVGYDAQSICDGLEQMQVVCLDGIDHICGIKSWEQGVF 125 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 LYN + ++G RLLI P L L LPDL SR+ Y ++ L+D K AL RA Sbjct: 126 HLYNNLRDAGH-RLLIASHTSPPALPLTLPDLKSRVLGSVRYHVESLNDLQKQDALIARA 184 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 RG ++P +V RF+L R R+ LF LDQLD AS+ QRKLT+PF KE+L L Sbjct: 185 VARGMDMPVEVARFILNRASRDTNELFYLLDQLDDASLQKQRKLTVPFAKEVLNL 239 >UniRef50_A4BFF9 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFF9_9GAMM Length = 235 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 1/232 (0%) Query: 2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLH 61 + QL L + +D F + PG N+ + L+ L IYLW +G G SHLL Sbjct: 5 HISPQLPLHVSFAEDAVFEDYLPGQNAIAIGTLRQSLANLTDHLIYLWGAKGVGVSHLLQ 64 Query: 62 AACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLY 121 A+ +L +G Y+PL + + PE L+G++ L V +D+I+ IA D W+ A+F Y Sbjct: 65 ASIHDLQVQGFDAVYLPLSECLEYGPEALEGLDQLHAVALDDIDLIAADAHWQEAVFHFY 124 Query: 122 NRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR 181 NR+ +SG+ L++ P QL L L DL SRL G L P++DE+++ + + R R Sbjct: 125 NRMRDSGR-HLMVGARCSPLQLPLTLADLKSRLSSGLTISLLPMTDEERVTWVIWKGRRR 183 Query: 182 GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 G + DV FL+ R ++ M+ L T D+LD AS+ +RK+TIPF+K++L L Sbjct: 184 GLVIGRDVAEFLITRHNQNMKELVTTFDRLDSASLAEKRKITIPFLKQVLGL 235 >UniRef50_UPI00016C3F50 initiation of chromosome replication n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3F50 Length = 504 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 96/227 (42%), Gaps = 14/227 (6%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQR-GDA 73 + A F G + + A +E + + G G++HLL A L ++ Sbjct: 166 SLADFVSGPCNRVAHASALSAVEEPGQGANPLVIHGPVGTGKTHLLEGVYAGLKRQSDQR 225 Query: 74 VGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 YV ++ T + + S++ +D++ +A + + ++ + Sbjct: 226 PCYVTAEEFTTKFVQASRLGKMSQFRRQFRECSVLLLDDLHFLATKKATQEEFLHTFDAL 285 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 + G+ ++++T D PR + +P+L RL G ++ LQP E +L+ L+ ++ Sbjct: 286 IADGR-QVVVTTDCHPRLADELMPELLDRLLGGAVWGLQPPDPETRLEILRKKSCGANPP 344 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 +PE+V + L L +R L ++ + + R + + +E L Sbjct: 345 IPENVLKTLANTLRGNVRELEGAINSVRHYAKVTGRPVDLATAREAL 391 >UniRef50_C0QBU6 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBU6_DESAH Length = 469 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 25/252 (9%) Query: 4 PAQLSLP-LYLPDD--------ETFASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAR 51 P Q++LP L + D TF F GDNS + L Q ++G IYL + Sbjct: 113 PMQMALPGLNIRSDSGRMLKKGYTFDRFVVGDNSDFAYSAALSLAQTSSVNNGAIYLLSD 172 Query: 52 EGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGME-HLSLV 99 G G+SHL A + +G V YV + T + + ++ Sbjct: 173 TGLGKSHLSQAVGHHVISQGFSDKVYYVTAEDFTNEMVSSIKNNTINGFKEKYRRKCDVL 232 Query: 100 CIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI 159 ++++ ++G + + + + ++++ K ++ +G P + L SRL G + Sbjct: 233 ILEDVHFLSGKDATQKELAMTLDYLMDAEKK-IIFSGCYLPDDIPKMNEQLKSRLTLGMV 291 Query: 160 YKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 K+ P + + +++ L+ +++ GF +P DV +L + L +R L L + R S Sbjct: 292 TKIDPPNFKTRVKILKNKSKYDGFVIPNDVTEYLAQELCDNVRQLESGLMGVARKSALLG 351 Query: 220 RKLTIPFVKEIL 231 K+ I + +L Sbjct: 352 EKIDINLARGVL 363 >UniRef50_Q39XN5 Regulatory inactivation of DnaA Hda protein n=8 Tax=Desulfuromonadales RepID=Q39XN5_GEOMG Length = 243 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 14/241 (5%) Query: 6 QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLR--QEHSGYIYLWAREGAGRSHLLHAA 63 QL + + +F + L + +YL G+G++HLL A Sbjct: 2 QLVFDFPVNPKYSLDNFVICSGNETAYRFVRRLTDDEGAENLLYLHGPSGSGKTHLLMAI 61 Query: 64 CAELSQRG--DAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 A S R +V + V ++ + + + +D++ I + Sbjct: 62 GAHFSARAGLSSVPCISFKDVDEVYGGEYPAEAVSKLAERFRNAPALLVDDLHLIPDQQA 121 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + ++ L+N ++G+ + ITG PP++L L SRL WG + ++ D+ + Sbjct: 122 VRVELWQLFNDFYQAGRP-IAITGLYPPKELPTIDDHLISRLLWGLVARVDISDDDSRRL 180 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ A R LP DV +LL + R++ +L LD + R ++ A+RK+++ +E L Sbjct: 181 IMKKLADDRQIVLPADVIDYLLLHVRRDVPSLIEALDAISRYALAAKRKVSVRLAREALA 240 Query: 233 L 233 Sbjct: 241 F 241 >UniRef50_D2MMX3 Chromosomal replication initiator protein DnaA n=1 Tax=Bulleidia extructa W1219 RepID=D2MMX3_9FIRM Length = 453 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 85/223 (38%), Gaps = 15/223 (6%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAEL 67 + D TF +F GD + A + ++++ G G++HLL A + Sbjct: 112 STIQKDRTFENFVIGDCNRESQAAAYAVSLNPGQLWNPLFIYGNSGLGKTHLLMAIANYI 171 Query: 68 SQRGD--AVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMA 116 + V Y K T + M L ++ ID+I+ IAG E Sbjct: 172 KKHQPEKKVYYTESTKFVETVVHALQTGTIDAFKRYMYSLDVLLIDDIQFIAGKEKSHEI 231 Query: 117 IFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQL 176 F +Y ++ + + ++ IT DR P+ + LASR G + E L Sbjct: 232 FFTIYEEMV-NNRKQVCITSDREPKDIKDLEDRLASRFLNGLTVGIDSPEFETARAILNQ 290 Query: 177 RARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 + ++ + E+ ++ +R L L+++ +I Q Sbjct: 291 KIKVNDNSIDEEGMNYIASNFAGNVRELEGALNRVLFYAIQFQ 333 >UniRef50_B8GUK9 Regulatory inactivation of DnaA Hda protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUK9_THISH Length = 233 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 131/229 (57%), Gaps = 1/229 (0%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 QL+L + LPD F +F G N L +L+ + R E +YL+ G+G++HLL A Sbjct: 2 QARQLTLDVTLPDGSDFDAFHAGANGLALDSLRALARGEGERQLYLYGEPGSGKTHLLQA 61 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 AC E S G Y+P L+G++ L LVC+D I + G E +F+L N Sbjct: 62 ACHEASLWGRRAAYLPAFLLRQGGAHALEGLDQLDLVCLDGISALVGCVETETGLFNLIN 121 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 TRL++ PR L+ LPDL SRL WG +++LQPL D K L RAR RG Sbjct: 122 ASR-CRDTRLVLADTHAPRALSAALPDLGSRLVWGPVFQLQPLDDAGKRAVLVERARRRG 180 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 F+LP +VG FLL+ R++ TL + L++L++AS+ QR++T+PF + +L Sbjct: 181 FDLPGEVGEFLLRTCARDLATLMVQLERLEQASLRDQRRVTLPFARAVL 229 >UniRef50_B8DN19 Chromosomal replication initiator protein dnaA n=2 Tax=Desulfovibrio RepID=DNAA_DESVM Length = 498 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 23/251 (9%) Query: 3 TPAQLSLPL-------YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREG 53 P+QL LPL L +F SF G N+ L A + +E + ++L + G Sbjct: 140 QPSQLGLPLDMPAPNRALNWRFSFDSFVVGPNNELAFAASRGICRETLSADTLFLSSGPG 199 Query: 54 AGRSHLLHAACAELSQRG----DAVGYVPLDKRTW---------FVPEVLDGMEHLSLVC 100 G++HL+ A L + V Y+ ++ V + ++ Sbjct: 200 LGKTHLMQAVGRALCEASNRAAPRVEYLTAEEFATRLIAALKAREVDRFKARYRDVDVLL 259 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ++++ + G E + + + G +R++++ R L L SR G + Sbjct: 260 LEDVHFLQGKERMQDEVLATVKALKSRG-SRVVLSSSFAARDLKNLDTQLVSRFCSGFLA 318 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR 220 + E + + L +ARL LP++V L R+ ++R + L L + R Sbjct: 319 HIDKPGFETRRRILCEKARLHQVMLPDNVTDLLADRIRTDVRQIESCLHNLVLKAKLLNR 378 Query: 221 KLTIPFVKEIL 231 ++++ E+L Sbjct: 379 QISMEMAWEVL 389 >UniRef50_A7IB67 Chromosomal replication initiator protein dnaA n=29 Tax=Alphaproteobacteria RepID=DNAA_XANP2 Length = 506 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 22/242 (9%) Query: 11 LYLPDDETFASFWPGDNSSLLAALQNVLRQEHS------GYIYLWAREGAGRSHLLHAAC 64 L TF +F G ++SL A + + +YL A G G++HLL A Sbjct: 162 SPLDARLTFETFVVGKSNSLAFAAAKQVAESAPGSAPVFNPLYLHAAVGLGKTHLLQAIA 221 Query: 65 AELSQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEM 115 + G Y+ ++ T D + + + ID+++ + G+ + Sbjct: 222 RAGAVGGRRTTYLTAERFMYGFVAALKTHSAIAFKDALRTIDTLVIDDLQFLKGNN-LQQ 280 Query: 116 AIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ 175 N +L+ G ++++ D P +L + SRL G + +L L ++ +L+ L+ Sbjct: 281 EFCHTLNALLD-GGRQVVVAADCLPGELEHLDERVRSRLAGGLVVELAALEEDLRLEILK 339 Query: 176 LRARLR-----GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEI 230 R + GF +P V FL + + + R L L++L + +T+ + Sbjct: 340 ARYQTLTEQHPGFAVPAPVLEFLARSVGQSGRDLDGALNKLLAFNQLTGEPVTLEMAENA 399 Query: 231 LK 232 +K Sbjct: 400 VK 401 >UniRef50_A8ZRP4 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRP4_DESOH Length = 460 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 25/252 (9%) Query: 5 AQLSLPLY---------LPDDETFASFWPGDNSSLLAALQNVL---RQEHSGYIYLWARE 52 AQL+LP L D TF +F G+++ L +Q ++L +R Sbjct: 106 AQLTLPSVQVKPATGRVLKADYTFDNFVVGNHNDFAYTAVLSLGARQQSGGRSLFLSSRP 165 Query: 53 GAGRSHLLHAACAELS--QRGDAVGYVPLDKRTWFVP---------EVLDGMEHL-SLVC 100 G G+SHL A + Q G V Y ++ + + ++ Sbjct: 166 GMGKSHLAQALGHQTIKAQPGCRVYYTTVEDFSNEMVYAYTTKSSGAFKKKYRTGFDMLL 225 Query: 101 IDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY 160 ID+I +AG + + + + + +LE+ + +L G P ++ L SRL G I Sbjct: 226 IDDIHALAGKDRTQEELAMVVDYMLEADRK-VLFAGCCLPGEIPKMNDQLKSRLSCGLIT 284 Query: 161 KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR 220 ++ +++ L+ +AR G+ +P D+ +L L ++R L L L S Sbjct: 285 TMETPDFTTRVRILEKKARFYGYAVPRDILEYLADVLTEDVRQLESGLANLATKSCLLGV 344 Query: 221 KLTIPFVKEILK 232 + + I+K Sbjct: 345 PMDRELAESIIK 356 >UniRef50_Q1MSG8 Chromosomal replication initiator protein dnaA n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=DNAA_LAWIP Length = 478 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 24/253 (9%) Query: 2 NTPAQLSLPLYLPD--------DETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAR 51 + QL LP+ L +F SF G ++L A + ++ + ++L + Sbjct: 119 SQTEQLPLPVSLVKAPFSSRSWRYSFDSFVVGPCNNLAHAAAQNMIKDTASVDTLFLSSG 178 Query: 52 EGAGRSHLLHAA----CAELSQRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSL 98 G G++HL A C ++ V Y+ ++ T V L Sbjct: 179 PGLGKTHLTQAVGQALCNISNRANPKVEYLTAEEFCSCFVQSLRTKNVDSFKGRFRDTDL 238 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 +++I + G E + + + G +R+++T P++L L SR G Sbjct: 239 FLLEDIHFLQGKEKMQDELLATIRSLQGRG-SRVVLTSSFAPKELKNVDNRLVSRFCSGF 297 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + ++ + E + + L +A++ L E V FL +L ++R L ++ L + Sbjct: 298 LAGIEKPNAETRRRILIEKAKVHAVVLSEAVADFLAMKLVGDIRQLESSISNLVLKAKLL 357 Query: 219 QRKLTIPFVKEIL 231 +++ K+++ Sbjct: 358 DCMISMDMAKDVI 370 >UniRef50_B8FFL8 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=DNAA_DESAA Length = 454 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 27/255 (10%) Query: 3 TPAQLSLPLY-----------LPDDETFASFWPGDNSSLLAALQNVLRQEHSG---YIYL 48 P QL LP + L D TF SF GD + + + + S +YL Sbjct: 96 APQQLCLPAFADIPRPSSGRLLNRDFTFDSFVVGDCNDFAYSAALSVASKRSKLHAPLYL 155 Query: 49 WAREGAGRSHLLHAACAELSQRGD--AVGYVPLDKRTWFV---------PEVLDGME-HL 96 A+ G G+SHL A ++ Q V Y+ + T + + + Sbjct: 156 LAQTGLGKSHLSQAVGRQVMQESPEERVFYITAEDFTNEMIGALNTGTISSFKEKYRRNC 215 Query: 97 SLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW 156 + ++++ ++G + + + ++E+ K RL+ T P ++ + SRL+ Sbjct: 216 DTLILEDVHFLSGKNRTQDELAFTLDSLMETNK-RLVFTSAYLPSEIPKMHDSMRSRLNA 274 Query: 157 GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASI 216 G I L+ +++ LQ +A LP DV F+ L ++R L + L + Sbjct: 275 GVISSLEAPDFRMRMRILQRKANSAKIALPMDVAEFMASELTGDIRHLESGIKGLAARNS 334 Query: 217 TAQRKLTIPFVKEIL 231 R + + +E++ Sbjct: 335 IMGRGIDLKMAREVV 349 >UniRef50_Q6ARL8 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfotalea psychrophila RepID=DNAA_DESPS Length = 479 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 103/252 (40%), Gaps = 25/252 (9%) Query: 4 PAQLSLPL---------YLPDDETFASFWPGDNSSLLAALQNVLRQEH---SGYIYLWAR 51 P QL LP L TF F G ++ L + + + +Y+ + Sbjct: 126 PRQLRLPSVPKNNASIRALHPRYTFDEFMVGQSNILAESACRAISADADTVGPCLYINSG 185 Query: 52 EGAGRSHLLHAACAELSQRGD--AVGYVPLDKRT---------WFVPEVLDGM-EHLSLV 99 G G+SHL HA L + YV + + + E ++ Sbjct: 186 TGLGKSHLTHAVAHHLLSNSPMTRMHYVTAQQFSAEMVHGIKNNSMDMFKKKYQEDCDIL 245 Query: 100 CIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI 159 +++I + G + + + ++ + +++SGK R+L+T + PR+L + SR+ G I Sbjct: 246 LVEDIHTLKGKKKTQEELNEVLDTLVKSGK-RVLLTANAAPRELAGIDGEFRSRMSAGLI 304 Query: 160 YKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ 219 +Q + + + ++ +A + ED+ +L + + ++R + + + + Sbjct: 305 TSIQAPDIKTRSRIVERKAAGQRLSFDEDMTSYLAQNVRGDVRQIESAITAIGARARLMG 364 Query: 220 RKLTIPFVKEIL 231 + + ++E++ Sbjct: 365 GYIDMNLIREVV 376 >UniRef50_C0N9A5 Chromosomal replication initiator protein DnaA n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N9A5_9GAMM Length = 234 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 137/228 (60%), Gaps = 3/228 (1%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL+L L + F ++ AL++ R ++ ++YL+ G G++HLL A Sbjct: 6 TQLTLRLSPQEIYHFDNYLFAKT-ETERALESFCRLDNLDFLYLYGETGTGKTHLLIACA 64 Query: 65 AELSQRGDAVGYVPLDKRTWFV-PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 ++ + G V Y+ L + P VL +E L+C+D++E +AG++ WE+A+F +NR Sbjct: 65 EKVQKLGFRVIYLSLAELIQTSEPAVLQSLEQADLLCLDDLEAVAGNKEWEVALFHCFNR 124 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + ++ K LL++ + P + LPDL SRL G +Y+L +SDE K QAL L+++ RG Sbjct: 125 LHDA-KGSLLVSAEHNPANSQIQLPDLCSRLATGLVYQLTTMSDEQKQQALILQSQKRGL 183 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +DV ++LL+ R+M L L QLD+AS+ A+RKLTIPF++++L Sbjct: 184 TMNDDVAQYLLRHYGRDMPALMSVLQQLDKASLQAKRKLTIPFIRQVL 231 >UniRef50_C5SEB2 DnaA regulatory inactivator Hda n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEB2_CHRVI Length = 237 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 3/232 (1%) Query: 1 MNTPA-QLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHL 59 MN P QL LPL L + T S+ PG N+ +L A+ + R Y+ L+ G G++HL Sbjct: 1 MNGPTPQLHLPLELRPEPTLESYRPGPNAEVLDAVSALARGAGEPYLLLFGASGTGKTHL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L A+C + + G +VPL P +L+ +E + LV ID+I+CI GD WE A+FD Sbjct: 61 LQASCQTVVRSGRQAHFVPLG-MADLDPAMLENLEQMDLVAIDDIQCIVGDPAWERALFD 119 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L+NR+ E G++ LL D P L LPDLASRL WG Y+L PL D D Q L AR Sbjct: 120 LFNRLREQGRS-LLGATDAAPDSLPFSLPDLASRLLWGPRYRLLPLPDLDCEQLLLESAR 178 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 RG L ++ RF++ R+ +L L +LD S+ QR+ +IP V+ I+ Sbjct: 179 GRGMRLTPELVRFIMSHHARDPASLLDLLARLDSLSLREQRQPSIPLVRRIM 230 >UniRef50_Q729U6 Chromosomal replication initiator protein dnaA n=5 Tax=Desulfovibrio RepID=DNAA_DESVH Length = 491 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 99/253 (39%), Gaps = 24/253 (9%) Query: 2 NTPAQLSLPLYLPD--------DETFASFWPGDNSSLLAALQNVLRQEH--SGYIYLWAR 51 QL LPL +F F G N+ L A + ++ + ++L + Sbjct: 129 QAQEQLGLPLDWAPVPQSRTNWRFSFDDFIVGPNNELACAAARGMCRDGLMTDTLFLSSG 188 Query: 52 EGAGRSHLLHAACAELSQR----GDAVGYVPLDKRTW---------FVPEVLDGMEHLSL 98 G G++HLLHA L + V Y+ ++ V + + Sbjct: 189 PGLGKTHLLHAVGRSLCESSNRSNPNVAYLTAEEFASRLIAALKARDVERFKARYRDVDV 248 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 + ++++ + G E + + + G +R++ + R L L SR G Sbjct: 249 LLLEDVHFLQGKEKMQDEVLATVKALQSRG-SRIVFSSSFAARDLKNVDNQLVSRFCSGF 307 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + ++ + + + L+ +AR+ LP++V L +R+ ++R + L L + Sbjct: 308 LAGIERPDFDTRRRILREKARIYQVMLPDNVTDLLAERISTDVRQIESCLHNLILKAKLL 367 Query: 219 QRKLTIPFVKEIL 231 R++++ EI+ Sbjct: 368 NRQISLEMAFEII 380 >UniRef50_C7RCV1 DnaA regulatory inactivator Hda n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCV1_KANKD Length = 229 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 102/231 (44%), Positives = 144/231 (62%), Gaps = 5/231 (2%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L + L D TFA+F G+N LL L + Q S +IY+++ +G GRSHLL A Sbjct: 2 QQLPLDIELHSDATFANFMVGENQLLLQKL-EAICQGESDFIYIYSEQGHGRSHLLQALT 60 Query: 65 AELSQRGDA--VGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 S++ + Y+PL+ VP++LDG+ V +D IE + D+ W+ AIF+LYN Sbjct: 61 HAYSEQNPDKLIAYLPLENSM-LVPQMLDGLVAFDCVSLDGIEKVIADKEWQTAIFNLYN 119 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 ++ E GK+ L+ TG P QL L L DL SRL IY ++PL+DE+KL LQ +A +G Sbjct: 120 QLKEQGKSFLI-TGLNAPSQLALELKDLKSRLSAMFIYNIKPLNDEEKLILLQRKAEEKG 178 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 EL +V +LL R R++ TL LD+LD+AS+ A+RKLTIPF+KE+L L Sbjct: 179 LELSNEVAHYLLARQQRDLPTLLGILDKLDQASLQAKRKLTIPFIKEVLGL 229 >UniRef50_Q3IIL0 Putative regulatory factor involved in inactivation of DnaA n=3 Tax=Alteromonadales RepID=Q3IIL0_PSEHT Length = 228 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ--EHSGYIYLWAREGAGRSHLLHAAC 64 ++LP+ LPDDETF S++ G++S ++ L++ + + Y YL +G+SHLL+A C Sbjct: 1 MALPVTLPDDETFTSYFGGEDSLEVSHLKDSFSKLSQSFQYTYLCGLGDSGKSHLLYATC 60 Query: 65 AELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 + +RG + + + + F P VL+G+E L ++CID++ +AGD+ WE A+F+ +NR Sbjct: 61 IQAQERGLSNMLLSMREVIDFGPMVLEGLEALDVLCIDDVHLVAGDDAWEKALFNFFNRF 120 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 K L++T D P LN+ LPDL SRL WG +++ +SD+DK QAL R ++RG E Sbjct: 121 -NEPKKMLVVTADLLPDMLNISLPDLESRLKWGTTLQIRSMSDDDKAQALVKRTKMRGLE 179 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 L ++ RFLL RL R+MRTL LD+LD AS+ AQRKLTIPF+K LKL Sbjct: 180 LSDECARFLLTRLSRDMRTLLDVLDKLDHASMAAQRKLTIPFIKSTLKL 228 >UniRef50_B0S907 Chromosomal replication initiator protein dnaA n=2 Tax=Leptospira biflexa serovar Patoc RepID=DNAA_LEPBA Length = 441 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 19/222 (8%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAEL 67 L + F+++ D++ + + ++ +YL+ G G++HLLH+ E+ Sbjct: 98 DSDLNPEYIFSNYITSDSNRIAFTAAKSVVEQPGKYNPLYLFGPVGVGKTHLLHSIGNEI 157 Query: 68 SQRGD--AVGYVPLDKRTW------------FVPEVLDGMEHLSLVCIDNIECI-AGDEL 112 ++ V YV + + +++ D+I+ + G E Sbjct: 158 KKKDPWKTVRYVNSTSFLNEFIFTVRQNNRESLESFKIRYQSYNVLLFDDIQFLNGGAEK 217 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + F L+N + + K +++I DRP +L L SR G ++ E + Sbjct: 218 TQEEFFALFNFLYDR-KRQIVIASDRPSYELP-LHDRLKSRFVHGLQADIKSHDLELRKS 275 Query: 173 ALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRA 214 L+ +++ +L +RL+ + R L ++ L Sbjct: 276 LLKSNFSEFNIPASDNLLHWLAERLEGDSRALIGIVNDLVMY 317 >UniRef50_C0GTM3 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTM3_9DELT Length = 449 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 1 MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEH--SGYIYLWAREGAGRSH 58 M+ P Q ++ + +F F G ++ L +E S ++L + G G++H Sbjct: 101 MHLPIQSNIQVVSRFRYSFQDFVVGPSNELAFVASRSFCREQVSSDQLFLCSSTGLGKTH 160 Query: 59 LLHAACAELS----QRGDAVGYVPLDKRT---------WFVPEVLDGME-HLSLVCIDNI 104 L+ + L+ + V Y+ ++ V + ++ +++I Sbjct: 161 LVQSMGNNLAGSSNKEALRVAYLTAEEFACQLIQAIKSKQVERFKARYRDQIDILMLEDI 220 Query: 105 ECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQP 164 G E + N + GK ++++ P++LN +L SRL G + + Sbjct: 221 HFFQGKEKIQGEFLSTINSLQGQGKK-VVLSSSFLPKELNDLDSNLVSRLCRGFMAVIDK 279 Query: 165 LSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTI 224 + + L+ +A LP++V L +R+ ++R L L L + + ++T+ Sbjct: 280 PDLGTRQEILRQKASSLQISLPQEVSHLLAERIQTDIRQLESCLSNLVFKARMLKERITL 339 Query: 225 PFVKEILK 232 E+LK Sbjct: 340 EMALEVLK 347 >UniRef50_B2S1V1 Chromosomal replication initiator protein dnaA n=2 Tax=Treponema pallidum RepID=DNAA_TREPS Length = 464 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 92/251 (36%), Gaps = 23/251 (9%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHL 59 P++ S L D TF +F G+ + + + + + ++ G G++HL Sbjct: 109 VPSKKSFHPDLNRDYTFENFVSGEETKFSHSAAISVSKNPGTSYNPLLIYGGVGLGKTHL 168 Query: 60 LHAACAELSQR-GDAVGYVPLDKRTWFV---------PEVLDGME-HLSLVCIDNIECIA 108 + A E+ + V YV + + ++ ID+I Sbjct: 169 MQAIGHEIYKTTDLNVIYVTAENFGNEFISTLLNKKTQDFKKKYRYTADVLLIDDIHFFE 228 Query: 109 GDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDE 168 + + +F +N + E K +++ T DRP ++L L SR G L E Sbjct: 229 NKDGLQEELFYTFNELFEK-KKQIIFTCDRPVQELKNLSSRLRSRCSRGLSTDLNMPCFE 287 Query: 169 DKLQALQLRARLRG-------FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRK 221 + L + + + +DV R + + + +R L L ++ + Sbjct: 288 TRCAILIKKIQNYNSTYPHKAIHISDDVVRLVSENISSNIRDLEGALTKIIAFIEVSGS- 346 Query: 222 LTIPFVKEILK 232 +TI V +LK Sbjct: 347 ITIDIVPSLLK 357 >UniRef50_C1ZD84 Chromosomal replication initiator protein dnaA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZD84_PLALI Length = 850 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 94/227 (41%), Gaps = 15/227 (6%) Query: 19 FASFWPGDNSSLLAALQNVLRQE---HSGYIYLWAREGAGRSHLLHAACAELSQRGD--A 73 + G + L A + E +YL+ G G++HLL +L ++ Sbjct: 511 LSDLVVGTGNELALAAARKVCDEVPAPFNPLYLFGNVGIGKTHLLEGISRQLRRQHPGLN 570 Query: 74 VGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 V + ++ +P ++ + ID+++ + + + + Sbjct: 571 VLMMTAEQFANCFTQALRDKTLPSFRQKFRNVDALLIDDVDFLDNTRVIREEFLHTFTEL 630 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 E G+ +++T DR P+ L+ +L +R G I +++ + + +Q++A G + Sbjct: 631 AERGRA-IVLTADRHPKLLSKLGDELVTRFMSGLICRVEAPDQATRERIVQMKAARMGTD 689 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + E+ ++ ++ +R L L+ L ++R++ + ++IL Sbjct: 690 ISEEALMWVAQKFRNNVRELEGALNCLHTWYTMSERRVGLATARQIL 736 >UniRef50_D0KYQ5 DnaA regulatory inactivator Hda n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYQ5_HALNC Length = 233 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 127/234 (54%), Gaps = 6/234 (2%) Query: 1 MNTP---AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRS 57 MNT Q+ L L L + F +N L A + + +++ + G++ Sbjct: 1 MNTSGKMQQIPLDLALNAPHSLDGFIGVENLLLRALITQLALGRGEAQLFIHGAQNCGKT 60 Query: 58 HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAI 117 HL AAC Q+G + Y+ + K + + + H+ L+ +D+++ +AGD+ E + Sbjct: 61 HLAQAACFYAGQQGRSAAYIDVKKNPSQLDHM--NLSHIDLLVLDDVDALAGDDQGEFLL 118 Query: 118 FDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR 177 FDL NR+ E + LL+T PP LPDL SRL WG + ++ +K++ L+ + Sbjct: 119 FDLINRLREQ-EIPLLMTASLPPAACGFQLPDLLSRLGWGITMLIHAPNEAEKIELLRRK 177 Query: 178 ARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A+ RGF+LP + +LL+R R++ +L + LD AS++AQRKLTIPFV+ +L Sbjct: 178 AQERGFDLPFESAVYLLQRSPRDLGSLLKIIQDLDHASLSAQRKLTIPFVRSVL 231 >UniRef50_Q04WF7 Chromosomal replication initiator protein dnaA n=5 Tax=Leptospira RepID=DNAA_LEPBJ Length = 437 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 24/242 (9%) Query: 10 PLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAEL 67 D TF +F GD + L ++ + +YL+ G G++HLLHA +EL Sbjct: 97 DFQFNPDYTFETFIVGDCNRLAYTAAKECVRKPAEINPLYLFGSVGVGKTHLLHAIGSEL 156 Query: 68 SQRGD--AVGYVPLDKRTWF----------VPEVLDGMEHLSLVCIDNIECIAGD-ELWE 114 ++ V Y+ + + + + + +D+I+ ++ + E + Sbjct: 157 IKKDPWKTVCYIDISSFMNEFRFALQSRELIESFKIKYQSYNCLLVDDIQLLSTNAEKTQ 216 Query: 115 MAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQAL 174 F L+N + E K +++I DRP +L L SR G +Q + E + + Sbjct: 217 DEFFALFNFLFER-KRQIVIASDRPSSEL-TIHERLKSRFVTGVQADIQYPNKEIRKGIV 274 Query: 175 QLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLD----RASITAQRKLTIPFVKEI 230 +++ L EDV FL +++ + R L L+ + S+ L + VKEI Sbjct: 275 TSHSKIMDLGLSEDVLEFLADQIEEDTRLLLGALNDIYLYKKSYSLLF---LNLDKVKEI 331 Query: 231 LK 232 +K Sbjct: 332 VK 333 >UniRef50_A3ZQ28 Chromosomal replication initiator protein dnaA n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ28_9PLAN Length = 460 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 89/227 (39%), Gaps = 14/227 (6%) Query: 18 TFASFWPGDNSSLLAALQNVLRQEHS--GYIYLWAREGAGRSHLLHAACAELSQ--RGDA 73 + G+ + + +++ +++ +G+G++HLL E + + + Sbjct: 121 SLEQLIVGECNKFASTAASMIMNRPGEINPLFICGPQGSGKTHLLEGIYGEARRSKKFER 180 Query: 74 VGYVPLDKRTWFVPE---------VLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRI 124 V Y+ ++ T + + L+ ID+++ AG + + I Sbjct: 181 VVYLSAEQFTTYFLDALNGSGVANFRRKYRDADLLIIDDVQFFAGKRATRTELLHTLDSI 240 Query: 125 LESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFE 184 G ++++ D+ P +L+ P+L +R G + ++ + + + + + R Sbjct: 241 TRRGG-QIVLAADKRPTELSALGPELIARFSGGLVCEVHEIDRDTRRKMAEKLCASRDMN 299 Query: 185 LPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 + +L L + R + +++L +++ R + + + L Sbjct: 300 ASRGLLDWLADHLPGDARLMSGAMNRLWATAMSLDRPVDVAMAENAL 346 >UniRef50_D2QZE0 Chromosomal replication initiator DnaA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZE0_9PLAN Length = 570 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 14/231 (6%) Query: 14 PDDETFASFWPGDNSSLLAALQNVL--RQEHSGYIYLWAREGAGRSHLLHAACAELSQRG 71 SF GD + + + + R + G G++HLL + Sbjct: 227 RPFARLDSFVEGDGNRIALSAAKSVLPRLGKMSPLVFSGPPGCGKTHLLEGIWSHARHHS 286 Query: 72 --DAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL 120 V Y+ ++ T +P + L+ ID+I+ AG + + Sbjct: 287 SLKRVVYLTAEQFTTHFVEALRGSGLPSFRKKYRDVELLLIDDIQFFAGKQSTLTELLYT 346 Query: 121 YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL 180 +L G+ +L++ DRP QL + D+ +RL G + + P + L+ A Sbjct: 347 IETLLREGR-QLVLAADRPLSQLRMLGADVVNRLGGGLVCTIDPADFGTRRGILERLAIE 405 Query: 181 RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R +P DV +L L+ + R L +++L + +Q+ LT+ + L Sbjct: 406 RSVVVPSDVLDWLAASLEGDARLLSGAMNRLAATAEMSQKALTLESAEAAL 456 >UniRef50_C6MBI1 DnaA regulatory inactivator Hda n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBI1_9PROT Length = 225 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 5 AQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ-EHSGYIYLWAREGAGRSHLLHAA 63 Q+ L + T +F PG N+ L+ L+++L E +IYLW G G+SHLL A Sbjct: 2 QQMLLDINPLPLPTLENFLPGRNAELIYMLRSILSGKEKECFIYLWGNPGCGKSHLLRAI 61 Query: 64 CAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 +++ Y + F + ID+I + + +F LYNR Sbjct: 62 VTAYARKNAKSVYHCAENHYPFRSD-----SAADCFAIDDIHGLGA--AGQAELFSLYNR 114 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + E G LL++G P L++ DL +RL WG +Y++ L++E+K QA+Q A GF Sbjct: 115 LREDGHALLLVSGSTAPAYLDMR-QDLVTRLGWGLVYQVHELTEEEKTQAMQTHAADCGF 173 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL 233 LP+++ +LL+ R++ +L MTLD L+R S+ QR +TIP ++E+L++ Sbjct: 174 TLPQEICVYLLRHGRRDLPSLMMTLDALNRYSLVHQRPITIPLLRELLQV 223 >UniRef50_Q2Z072 Chromosomal replication initiator protein dnaA n=2 Tax=Gammaproteobacteria RepID=Q2Z072_9GAMM Length = 243 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 6/228 (2%) Query: 6 QLSLPLYLPDDETFASFW-PGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAAC 64 QL L ++L DD T +F + L++ALQ+ + + IY++ GAG+SHLL A+C Sbjct: 18 QLPLEIHLRDDATMDNFLTVSRSQPLVSALQHQMDADGEAIIYVYGPPGAGKSHLLQASC 77 Query: 65 AELSQRGDAVGYVPLDKRTWF-VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR 123 Y+PL + F EV+ G+E L VCID+++ + GD WE+A+F+ N Sbjct: 78 HAGRA---ETLYLPLAELRQFPGQEVMQGVERLDRVCIDDVQAVLGDADWELALFNFCNG 134 Query: 124 ILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGF 183 + G R+++ GD PR L + L DL SRL WG +Y+L SDE+K+ L+ RA RG Sbjct: 135 ARQRG-CRMVVAGDAAPRALAVNLADLRSRLSWGIVYQLAEGSDEEKVDILRFRATRRGL 193 Query: 184 ELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L + V F++ R R L M LDQLD+ S+ QR L+IPFVKE++ Sbjct: 194 SLSKSVATFIVSRAPRATEQLLMVLDQLDKHSLARQRALSIPFVKEVM 241 >UniRef50_Q30YX9 Chromosomal replication initiator protein dnaA n=3 Tax=Desulfovibrio RepID=DNAA_DESDG Length = 461 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 24/253 (9%) Query: 2 NTPAQLSLPLYLPDD--------ETFASFWPGDNSSLLAALQNVLRQEHSGY--IYLWAR 51 + Q+ LPL+ +F F G ++ + A + Q+ ++L + Sbjct: 101 SGAEQMGLPLHYASRSADSIKWMHSFDEFVVGPSNQMAFAASQDICQQSFRSDTLFLSSD 160 Query: 52 EGAGRSHLLHAA----CAELSQRGDAVGYVPLDKRT---------WFVPEVLDGMEHLSL 98 G G++HLLHA C ++ V Y+ ++ V + + Sbjct: 161 PGLGKTHLLHAVGQQLCNISNRTLPRVEYLTAEEFATRLICALKAKEVDRFKARYRDVDV 220 Query: 99 VCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQ 158 + ++++ + G + + + + G ++L + P+ LN L SR G Sbjct: 221 LLLEDVHFLQGKQRMQDEVLSTVKALQSRG-AKVLFSSSFAPKDLNDLDSQLTSRFCSGL 279 Query: 159 IYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA 218 + ++ + E + Q L+ +ARL +LPE V L + ++R + L L + Sbjct: 280 LAVIEKPTFETRKQILREKARLHHVQLPEQVADLLADNIRADVRQIESCLRNLLLKARLL 339 Query: 219 QRKLTIPFVKEIL 231 +++T+ EI+ Sbjct: 340 NQQITMDMAWEII 352 >UniRef50_B4X369 Chromosomal replication initiator protein DnaA n=2 Tax=Alcanivorax RepID=B4X369_9GAMM Length = 229 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 2/229 (0%) Query: 3 TPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHA 62 AQL L L L + +F G N + +A L + + WA +G G+SHLL Sbjct: 1 MSAQLPLALQLREGNALDNFHAGPNGAAVAGLHEAVEG-VDRQAFFWAGDGQGKSHLLEG 59 Query: 63 ACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 A G +P + VP+VL+ ME L+ ID+ + AG WE A+F LYN Sbjct: 60 AVRLAQHNGLDACLLPASEIIPLVPDVLESMEQFGLLAIDDCQLFAGLPAWEEALFHLYN 119 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 R++ G RLL+T + P + L LPDLA+RL G +Y+L L DED LQ RAR RG Sbjct: 120 RLMSLGG-RLLVTANASPGAMGLMLPDLATRLAAGPVYRLMSLEDEDLQALLQERARARG 178 Query: 183 FELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 L +V +++ R +R L L LDR ++ QR +TIPFVK+ L Sbjct: 179 LRLEPEVAHYIVLRSERSAGALMELLSDLDRLALAQQRSVTIPFVKDAL 227 >UniRef50_C7MLD2 Chromosomal replication initiator protein dnaA n=2 Tax=Coriobacteriaceae RepID=C7MLD2_CRYCD Length = 506 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 91/240 (37%), Gaps = 27/240 (11%) Query: 17 ETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSHLLHAACAELSQRGD 72 +F SF G ++ + ++ + + ++++ + G G++HLL + + Sbjct: 164 YSFESFVIGTSNKMAYSMAVAVAETPGQPQFNPLFIYGKSGLGKTHLLRSIQNYVHHAYP 223 Query: 73 --AVGYVPLDKRTWFVPE------------VLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 YV + E ++ ID+++ + + +F Sbjct: 224 TAKTVYVDTMALVNDYTDAAISRSNKSFSQFKQKYETADVLLIDDVQGLQNKKETLNMVF 283 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 + N +++ GK +++ + DR P+ ++ SR + G +QP E KL ++ Sbjct: 284 QILNSMIDRGK-QVVFSADRAPKNID-IDERYMSRFNMGGTCDIQPPELETKLGIIKNYL 341 Query: 179 RL------RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQR-KLTIPFVKEIL 231 F +P DV ++ + +R L + ++ + ++TI +L Sbjct: 342 EECRRGANDDFSIPADVQEYIAQNSSSNIRELKSAVTKVVFELRNNGKSEITIDEAARLL 401 >UniRef50_B5JXJ7 DnaA regulatory inactivator Hda n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ7_9GAMM Length = 234 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 91/233 (39%), Positives = 126/233 (54%), Gaps = 4/233 (1%) Query: 3 TPAQLSLPLYLPDDETFASFWPG--DNSSLLAAL-QNVLRQEHSGYIYLWAREGAGRSHL 59 QL L + P+ F +WPG N+ L L Q R E +L+ E G++HL Sbjct: 1 MNTQLLLGIQAPEYARFERYWPGADSNNCLALELCQQAARNEGERQCFLYGDEAVGKTHL 60 Query: 60 LHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 L AACAE + G + ++PL + + VL G+E LVCID+I IAG WE A+FD Sbjct: 61 LQAACAEAALNGLSASFIPLREMVTYGCGVLQGLEQQQLVCIDDIHVIAGQAGWEEAVFD 120 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRAR 179 L NR E TRLL++ P L DL SRL WG + +L L ++K Q LQ RA Sbjct: 121 LINRCREQ-DTRLLMSSSIPASSHAFELGDLRSRLAWGPVLQLHELQQDEKWQWLQARAE 179 Query: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 RGF + E+ G++L R M L L++LDR ++ QRK+T+P +K+ L Sbjct: 180 YRGFFISEESGQYLFAHYPRSMAFLNYALEELDRITLQTQRKVTVPLLKQELN 232 >UniRef50_Q0ATU0 Chromosomal replication initiator protein dnaA n=2 Tax=Hyphomonadaceae RepID=Q0ATU0_MARMM Length = 482 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 87/250 (34%), Gaps = 22/250 (8%) Query: 4 PAQLSLP--LYLPDDETFASFWPGDNSSLLAALQNV---LRQEHSGYIYLWAREGAGRSH 58 AQ +F SF G + + AA ++ + G G++H Sbjct: 131 TAQTPADGTSPGDARFSFDSFRVGPANEVAAAAARTMVGASTPPFNPVFFYGDYGVGKTH 190 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRTW---------FVPEVLDGMEHLSLVCIDNIECI 107 LLHA + R Y+ ++ + + + ++ ID++ I Sbjct: 191 LLHAVASAARNGSRPRKALYLTAEEFLSGFVTAMKARDTISFKETVRGVDVLLIDDVHFI 250 Query: 108 AGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSD 167 AG E ++ K ++++ +PP +L + L S L G L Sbjct: 251 AGKPKTEDEFLHTIAALVAENK-QVVLASHKPPAELQMQDERLRSLLTGGLSCPLGKPDL 309 Query: 168 EDKLQALQLRARLR-----GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKL 222 + + Q L + F++ E V FL R+ R + L+ + + + + Sbjct: 310 DLRRQILDCKIAQATCHYPTFDVSEAVRDFLAARITSSPREMEGVLNNVICRTALIGQPV 369 Query: 223 TIPFVKEILK 232 T+ V L+ Sbjct: 370 TMEVVSTALR 379 >UniRef50_C8WIM6 Chromosomal replication initiator protein dnaA n=2 Tax=Coriobacteriaceae RepID=C8WIM6_EGGLE Length = 520 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 105/258 (40%), Gaps = 32/258 (12%) Query: 5 AQLSLPLYLPDD--ETFASFWPGDNSSLLAALQNVLRQEHS----GYIYLWAREGAGRSH 58 +++L TF +F GD++ + ++ + + ++++ + G G++H Sbjct: 161 REIALDGPDSPASTLTFENFVIGDSNRMAYSMAVAVAEMPGKAHLNPLFIYGKSGLGKTH 220 Query: 59 LLHAACAELSQ--RGDAVGYVPLDKRTWFVPE--------------VLDGMEHLSLVCID 102 L+ A +++ + YV + E E ++ ID Sbjct: 221 LMRAIQNYINETMPQLSTIYVDSAELLSDYMEASAAHDKQKSSYKNFKTRYEEADVLLID 280 Query: 103 NIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 +++ + G + +F ++N++ G+ +++++ DR P+ ++ SR + G + + Sbjct: 281 DVQYLQGKKQTLDIVFQIFNKLTSQGR-QVVLSADRAPKNID-IDERYRSRFNSGGTFDI 338 Query: 163 QPLSDEDKLQALQLRARL-------RGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS 215 QP E KL ++ F +P+D+ ++ + +R L + ++ Sbjct: 339 QPPEIETKLGIVKSFVDEYRESEGSHDFNIPDDIQMYIAESSSSNIRELKSAVTKVIYQM 398 Query: 216 ITAQRK-LTIPFVKEILK 232 + L + V+ +L+ Sbjct: 399 TFFNQPDLKLDDVRTLLE 416 >UniRef50_Q8UIH1 Chromosomal replication initiator protein dnaA n=11 Tax=Rhizobiales RepID=DNAA_AGRT5 Length = 487 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 24/244 (9%) Query: 9 LPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHS-----GYIYLWAREGAGRSHLLHAA 63 L TF +F G ++ + A + + + +++ A G G++HLL A Sbjct: 139 FGSPLDTRFTFDTFVEGSSNRVALAAAKTIAEAGAGAVRFNPLFIHAGVGLGKTHLLQAI 198 Query: 64 CAELSQ--RGDAVGYVPLDKRT---------WFVPEVLDGMEHLSLVCIDNIECIAGDEL 112 R V Y+ + + D + ++ L+ ID+++ + G + Sbjct: 199 ANAAIDSPRNPRVVYLTAEYFMWRFATAIRDNDALTLKDTLRNIDLLVIDDMQFLQGK-M 257 Query: 113 WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQ 172 + L N +L+S K ++++ DR P +L P + SRL G +++ + + + Sbjct: 258 IQHEFCHLLNMLLDSAK-QVVVAADRAPWELESLDPRVRSRLQGGMAIEIEGPDYDMRYE 316 Query: 173 ALQLRA-----RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFV 227 L R FE+ +++ + K + R L +QL L++ V Sbjct: 317 MLNRRMGSARQDDPSFEISDEILTHVAKSVTASGRELEGAFNQLMFRRSFEP-NLSVDRV 375 Query: 228 KEIL 231 E+L Sbjct: 376 DELL 379 >UniRef50_C1A893 Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A893_GEMAT Length = 592 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 89/233 (38%), Gaps = 15/233 (6%) Query: 13 LPDDETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQ 69 L F +F G ++ L A+ + ++++ G G++HL+ A + Sbjct: 5 LDRKLRFDTFVVGGSNRLAASAARAVADAPGQAYNPLFVYGESGRGKTHLVAAIANRAQE 64 Query: 70 RGD--AVGYVPLDKRTWFV---------PEVLDGMEHLSLVCIDNIECIAGDELWEMAIF 118 V + ++ + L+ + L+ +D+++ + G + + Sbjct: 65 NQPDLRVLFSSGEEVAEHLHQSIASGQPQRFLEHYQQADLLILDDVQFLTGQRETQSELL 124 Query: 119 DLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRA 178 L N ++ +G+ +L+ T DR P + L SRL G + + E +L L+ A Sbjct: 125 RLLNVLMRAGQ-QLVFTSDRQPADIPDVDQRLLSRLSGGLVVDVGSPDFEMRLAILRNVA 183 Query: 179 RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 R + V + + +R L L++L + + V+ I+ Sbjct: 184 VERRTDFASGVLDEVARLPFANVRELKGALNKLSAYQQLEGQPVKADDVRAIV 236 Score = 147 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 18/180 (10%) Query: 17 ETFASFWPGDNSSLLAALQNVLRQEHS---GYIYLWAREGAGRSHLLHAACAELSQRG-- 71 T S + L + + +E + L G+G+SH +HA + Q Sbjct: 389 FTRESLQISTGNQLALRAVDAVLEEPGRRYNPLLLHGPSGSGKSHTVHAIGNAMKQADGR 448 Query: 72 DAVGYVPLDKRTWFVPEVLD---------GMEHLSLVCIDNIECIAGDELWEMAIFDLYN 122 AV + + + +D+I+ + G E + +F L+N Sbjct: 449 RAVACLSAGTFVEEFVAAMQEGGVERWRARYRAADVFILDDIQELVGKERTQDELFHLFN 508 Query: 123 RILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRG 182 ++ G +++++T DR PR LN L SR + G + L ++++ QL AR G Sbjct: 509 HLVNRG-SQVVLTSDRIPRDLNGFADRLRSRFEGGLVVALPA---RERVRVEQLVARAPG 564 >UniRef50_D1AW25 Chromosomal replication initiator protein dnaA n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AW25_STRM9 Length = 441 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 91/239 (38%), Gaps = 19/239 (7%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREGAGRSHLLHAACAELSQ 69 L TF ++ GDN+ L + + + ++ G G++HL A E+ + Sbjct: 100 NLNKKFTFNNYVIGDNNLFAYKLGMAILDGKLSNSPLMIYGDSGLGKTHLAQAIGNEMIE 159 Query: 70 RGD--AVGYVPLDKRTWFVP---------EVLDGMEHLSLVCIDNIECI-----AGDELW 113 + V Y + + + D L ++ +D+I+ GD+ Sbjct: 160 KNPESKVFYTTSTEFSNELIKSFSERTTISFKDKYADLDMLIVDDIQFFENIFGKGDDKI 219 Query: 114 EMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQA 173 + ++ +N + + K +LI D+ P +L L SRL G + +L+ ++ Sbjct: 220 QKEFYNAFNTLHMANKPIILI-SDKYPEELTNVEARLISRLVSGALVELKMPDKTSRISI 278 Query: 174 LQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILK 232 ++ + +++ F+ L+ +R L ++ + + + + + L Sbjct: 279 IKTIITKENIPMDQELMYFIADELETNIRELEGFVNTIVARAKLMNEVVNKKMIIDELN 337 >UniRef50_D1R6Y2 Chromosomal replication initiator protein dnaA n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6Y2_9CHLA Length = 464 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 28/243 (11%) Query: 7 LSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ---------------EHSGYIYLWAR 51 LS + TF F +++ L L + IYL+ + Sbjct: 105 LSFD-QVDPYCTFDQFVISESNLLAHKLLCKITGFDSVSKTFIPPTSDLAAFNPIYLYGK 163 Query: 52 EGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWF---------VPEVLDGMEHLSLVCID 102 EG G++HLL A L ++G + Y + T + ++ ++ ID Sbjct: 164 EGTGKTHLLMATADALRKQGLSAIYTRAETFTEHVVGAIRAGEMSTFRQAYRNIDVLLID 223 Query: 103 NIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKL 162 ++ + + +F +N + SGK +++++ P L L P L SR +WG + L Sbjct: 224 DVHVFSRKGATQEELFHTFNTLHLSGK-QIVLSSHCLPGDLQLIEPRLVSRFEWGIVLPL 282 Query: 163 QPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRAS--ITAQR 220 + L+ ++K + L +AR + L V ++LL+ + L L+ L S Sbjct: 283 ESLNIQEKQEMLSRKARAFNYLLNPKVSQYLLETFTSSTKALVKALEALILRSHLNLKGT 342 Query: 221 KLT 223 +T Sbjct: 343 SIT 345 >UniRef50_A0NR08 Chromosomal replication initiator protein dnaA n=2 Tax=Labrenzia RepID=A0NR08_9RHOB Length = 491 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 19/237 (8%) Query: 12 YLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYI---YLWAREGAGRSHLLHAACAELS 68 L TF +F G ++SL A + H G + Y+ + G G++HLL AA +E Sbjct: 152 SLNPKLTFDTFAEGASNSLACAAVRQMAAGHQGTLDMLYIHSATGIGKTHLLQAAASEAR 211 Query: 69 QRGDAVGYVPLDKR---------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFD 119 + G V Y+ + T P + M + L+ +D+++ + G + E F Sbjct: 212 KTGRQVAYLSAEFFMYHLVPALRTPAFPILRQAMRSIDLLLVDDLQFLHGKQAAEE--FS 269 Query: 120 LYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLR-- 177 +L +++++ DRP L+ L R+ G++ +Q + L+ R Sbjct: 270 KTLELLMESPSQIIMAADRPAEDLDTLGDALRFRIQKGEVVGIQATDYALRHDILKKRIN 329 Query: 178 ARLR---GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEIL 231 A R GF +PEDV ++ + + R L L++L + ++ +T+ ++ L Sbjct: 330 AARRTHPGFSVPEDVADYIARYVIASARDLEGALNRLFAHNQLTKQPVTMDLAEKTL 386 >UniRef50_C8X0Y0 Chromosomal replication initiator protein dnaA n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0Y0_DESRD Length = 460 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 94/246 (38%), Gaps = 22/246 (8%) Query: 7 LSLPLYLPD-----DETFASFWPGDNSSLLAALQNVLRQE--HSGYIYLWAREGAGRSHL 59 L + +F F G + L A L ++ + ++L + G G++HL Sbjct: 113 LPIDYSHVPQPQQWRHSFDDFIIGQCNQLAHAACTNLCRKTLPAESVFLSSGPGLGKTHL 172 Query: 60 LHAACAELSQRGD----AVGYVPLDKRTWFVPE---------VLDGME-HLSLVCIDNIE 105 LHA +Q VGYV ++ + D +L ++ ++++ Sbjct: 173 LHAVGHYYAQNQKNSQVRVGYVTAEEFANQMIMALKNRTIGTFKDRYRKNLDVLLLEDVH 232 Query: 106 CIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPL 165 G E + + + LE +++ + P++LN L S G I + Sbjct: 233 FFQGKEKIQEELLSTI-KFLEQHGRKVVFSSSFLPKELNKVDNQLTSLFCSGFIAPIDAP 291 Query: 166 SDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIP 225 + +L+ +Q +A+ +P +V + + + ++R L + + + + + Sbjct: 292 DADMRLKIIQAKAQRFQIHIPTEVQEMVAENIHSDIRQLESCIKNMALKARLLNQGINQA 351 Query: 226 FVKEIL 231 +E+L Sbjct: 352 LAEEVL 357 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.170 0.490 Lambda K H 0.267 0.0519 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,758,346,503 Number of Sequences: 3077464 Number of extensions: 85446824 Number of successful extensions: 377417 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2327 Number of HSP's successfully gapped in prelim test: 5623 Number of HSP's that attempted gapping in prelim test: 367307 Number of HSP's gapped (non-prelim): 9832 length of query: 233 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 108 effective length of database: 655,713,356 effective search space: 70817042448 effective search space used: 70817042448 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 92 (39.7 bits)