5 c3pvsA_ Probab=99.93   E-value=3.2e-25  Score=182.25  Aligned_columns=204  Identities=20%

Q ss_pred             CCCCCCCCCCCHHHCCCCCCHHHHH--HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
Q ss_conf             6776898757844502288689999--99999835899759998189872899999999986159983999845861243
Q batch____         8 SLPLYLPDDETFASFWPGDNSSLLA--ALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWF   85 (233)
Q Consensus         8 ~l~~~~~~~~t~d~fv~~~~~~~~~--~l~~~~~~~~~~~ilL~Gp~GtGKT~la~aia~~~~~~~~~v~~~~~~~~~~~   85 (233)
                      ||+.+|||+ |||||| |+++.+..  .++.++..+..++++||||||||||++|+++++.++.++..+++...+  ...
T Consensus         2 PLa~r~RP~-~l~div-Gq~~~~~~~~~L~~~i~~~~~~slIL~GppGtGKTtlA~~iA~~~~~~fi~ina~~~~--v~~   77 (414)
T c3pvsA_           2 PLAARMRPE-NLAQYI-GQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSG--VKE   77 (414)
T ss_dssp             CHHHHTCCC-STTTCC-SCHHHHSTTSHHHHHHHHTCCCEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCC--HHH
T ss_pred             CHHHHHCCC-CHHHHC-CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCC--HHH
T ss_conf             932464668-775610-8299998899999999759998499976988988999999999719989999754479--899


Q ss_pred             HHHHHHHHH------CCCEEEEECCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             699999741------59849980412136767887778986254212797289996058145556775302333211100
Q batch____        86 VPEVLDGME------HLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI  159 (233)
Q Consensus        86 ~~~~~~~~~------~~~vl~iDei~~l~~~~~~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (233)
                      ..+.+....      .+.++||||+|++            .+......+..++|+++|..+...     .....+++|..
T Consensus        78 ir~ii~~a~~~~~~~~~~ILfIDEi~rl------------aLL~~lE~~~iilI~aTten~~~~-----i~~aL~SR~~v  140 (414)
T c3pvsA_          78 IREAIERARQNRNAGRRTILFVDEVHRF------------AFLPHIEDGTITFIGATTENPSFE-----LNSALLSRARV  140 (414)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEETTTCC------------CCHHHHHTTSCEEEEEESSCGGGS-----SCHHHHTTEEE
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECHHHH------------HHHHHHHCCCEEEEEEECCCCHHH-----CCHHHHHHEEE
T ss_conf             9999999875111258808998413576------------657875449848999826760441-----69888830006


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHC-------CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC---CCCCHHHHHH
Q ss_conf             2467789889647999998424-------89881799999999779998999999999999999728---8559899999
Q batch____       160 YKLQPLSDEDKLQALQLRARLR-------GFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQ---RKLTIPFVKE  229 (233)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~l~~la~~~~g~~r~l~~~l~~l~~~a~~~~---~~It~~~v~~  229 (233)
                      +.+.+++..++..++...+...       ++.+++++++.|++.++||+|.++|+|+.+...+....   +.|+.+.+++
T Consensus       141 i~l~~ls~edi~~il~~~l~~~~~~~~~~~i~i~d~al~~Ia~~s~GD~R~aLn~LE~a~~~a~~~~~~~~~i~~~~v~~  220 (414)
T c3pvsA_         141 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE  220 (414)
T ss_dssp             EECCCCCHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCBCTTSCEECCHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHH
T ss_conf             77168998999999999999999870878986698999999985799989999999999995146676655489999999


Q ss_pred             HHC
Q ss_conf             867
Q batch____       230 ILK  232 (233)
Q Consensus       230 ~L~  232 (233)
                      +++
T Consensus       221 ~~~  223 (414)
T c3pvsA_         221 IAG  223 (414)
T ss_dssp             HHT
T ss_pred             HHH
T ss_conf             862