365 c1vciA_ Probab=96.92   E-value=0.006  Score=38.36  Aligned_columns=104  Identities=13%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC--------------------------------------
Q ss_conf             899759998189872899999999986159983999845861--------------------------------------
Q batch____        41 EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKR--------------------------------------   82 (233)
Q Consensus        41 ~~~~~ilL~Gp~GtGKT~la~aia~~~~~~~~~v~~~~~~~~--------------------------------------   82 (233)
                      ..+..+.|.||.|+|||||.+.|+.......-.+......-.                                      
T Consensus        30 ~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  109 (353)
T c1vciA_          30 KDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQHMTVYENIAFPLKKFPKDEIDKRV  109 (353)
T ss_dssp             CTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGTTEEEECCCCCHHHHHHTTCCCCCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHCEEECCCCCCEEEECCCCCCHHHHHHHCCHHH
T ss_conf             89978999879998888999999668747600799888887457832302202333200000121121000011000025


Q ss_pred             ------------------------HHHHHHHHHHHHCCCEEEEECCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             ------------------------24369999974159849980412136767887778986254212797289996058
Q batch____        83 ------------------------TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDR  138 (233)
Q Consensus        83 ------------------------~~~~~~~~~~~~~~~vl~iDei~~l~~~~~~~~~l~~~l~~~~~~~~~~~i~~~~~  138 (233)
                                              ..+..-...-...+.++++||--. ..|......++..+.......+..+++++..
T Consensus       110 ~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~llllDEP~s-~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~  188 (353)
T c1vciA_         110 RWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLS-NLDAKLRVAMRAEIKKLQQKLKVTTIYVTHD  188 (353)
T ss_dssp             HHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEEEESTTT-TSCHHHHHHHHHHHHHHHHHHCCEEEEEESC
T ss_pred             HHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             787631385101102520357661576888898507865999956101-9888999999999999999739824677305


Q ss_pred             HHHHHHH
Q ss_conf             1455567
Q batch____       139 PPRQLNL  145 (233)
Q Consensus       139 ~~~~~~~  145 (233)
                      ..+....
T Consensus       189 ~~~~~~~  195 (353)
T c1vciA_         189 QVEAMTM  195 (353)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             7888864