42 c1s3sA_ Probab=99.78   E-value=6.9e-17  Score=128.42  Aligned_columns=224  Identities=14%

Q ss_pred             CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHC-------------CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             787324677689875784450228868999999999835-------------8997599981898728999999999861
Q batch____         2 NTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQ-------------EHSGYIYLWAREGAGRSHLLHAACAELS   68 (233)
Q Consensus         2 ~~p~q~~l~~~~~~~~t~d~fv~~~~~~~~~~l~~~~~~-------------~~~~~ilL~Gp~GtGKT~la~aia~~~~   68 (233)
                      ..|..-.-.....+..+|+|  .|.-.+....++.++..             ..++.+|||||||||||++++++|++++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~d--IgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~  241 (436)
T c1s3sA_         164 GEPIKREDEEESLNEVGYDD--VGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG  241 (436)
T ss_dssp             SCCBCCCTTCCCTTSCCGGG--CCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCHHH--HHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf             55444321012356789534--2054999999999999750188989748899875389867998997899999987449


Q ss_pred             CCCCEEEE-----EECCCCHHHHHHHHHHHH--CCCEEEEECCHHCCCC---------HHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             59983999-----845861243699999741--5984998041213676---------7887778986254212797289
Q batch____        69 QRGDAVGY-----VPLDKRTWFVPEVLDGME--HLSLVCIDNIECIAGD---------ELWEMAIFDLYNRILESGKTRL  132 (233)
Q Consensus        69 ~~~~~v~~-----~~~~~~~~~~~~~~~~~~--~~~vl~iDei~~l~~~---------~~~~~~l~~~l~~~~~~~~~~~  132 (233)
                      .+.+.+..     .+.++.+......+....  +++++++||+|.+..+         ......+...++........++
T Consensus       242 ~~~~~i~~~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  321 (436)
T c1s3sA_         242 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV  321 (436)
T ss_dssp             CEEEEEEHHHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEE
T ss_pred             CCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             95899730687001001588889999999975099489840000321025788745889999999864302224698799


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHH
Q ss_conf             9960581455567753023332111002467789889647999998424898817999999997799-989999999999
Q batch____       133 LITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDR-EMRTLFMTLDQL  211 (233)
Q Consensus       133 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~la~~~~g-~~r~l~~~l~~l  211 (233)
                      |.+++.+    ..+.+.++..-.+...+.+..|+..++..+++.......+.-+-+ +..|++++.| +++++..+++.+
T Consensus       322 i~tt~~~----~~l~~~l~r~~rf~~~i~~~~P~~~~R~~Il~~~~~~~~l~~d~~-~~~la~~t~g~~~~dl~~l~~~a  396 (436)
T c1s3sA_         322 MAATNRP----NSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADLAALCSEA  396 (436)
T ss_dssp             EEEESCG----GGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSEECTTCC-HHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             EEECCCH----HHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             9844895----888824204240303666789899999999999843898988668-78899876899889999999999


Q ss_pred             HHHHHH------------------HCCCCCHHHHHHHHC
Q ss_conf             999997------------------288559899999867
Q batch____       212 DRASIT------------------AQRKLTIPFVKEILK  232 (233)
Q Consensus       212 ~~~a~~------------------~~~~It~~~v~~~L~  232 (233)
                      ...+..                  .+..||.+..+++|+
T Consensus       397 ~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~  435 (436)
T c1s3sA_         397 ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS  435 (436)
T ss_dssp             HHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHH
T ss_conf             999999888640200210387667301016998998860