28 c2vwpA_ Probab=100.00  E-value=0  Score=294.53  Aligned_columns=339  Identities=19%

Q ss_pred             CEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCC---CCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf             95699816888704999803786898638999999973899999985988888---995114430279999617769988
Q batch____         1 MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSD---EFNSIRGHEFAGCIAQVGEKVKDW   77 (358)
Q Consensus         1 Mka~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~~in~~D~~~~~g~~~~~---~~P~v~G~e~~G~Vv~vG~~v~~~   77 (358)
                      |||++++ +|++.++++|+|+|+|+|+||||||+|++||++|++++.|.++..   ++|+++|||++|+|++.|  +++|
T Consensus         1 MkA~~~~-~g~~~~~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~P~v~G~e~~G~Vv~~g--~~~~   77 (357)
T c2vwpA_           1 MKAIAVK-RGEDRPVVIEKPRPEPESGEALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPN--DTEL   77 (357)
T ss_dssp             CEEEEEE-TTCCSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTCTTSSCTTCSEEECCCEEEEEEEECT--TSSC
T ss_pred             CEEEEEE-CCCCCEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCC--CCCC
T ss_conf             9569994-489822999822686588728999999971999999885986556777896032320589997558--8887


Q ss_pred             CCCCEEEEEC-CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8898799923-787889877551111234444321013577778853249997187602352233258975541111022
Q batch____        78 KVGQRVVSDN-SGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVL  156 (358)
Q Consensus        78 ~vGDrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~~~~~~ip~~~~~~~~~~~  156 (358)
                      ++||||++.. ....++.|..|.......+..............|++++|+.++.+.+..       +|+..+...++..
T Consensus        78 kvGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~-------~P~~~~~~~a~~~  150 (357)
T c2vwpA_          78 EEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVR-------IPRSQAELGFLIE  150 (357)
T ss_dssp             CTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEE-------CCGGGSTTGGGHH
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHCCC-------CCCCCCHHHHHHH
T ss_conf             889879999427777774101687888865455523357668997210003420787342-------8899998999997


Q ss_pred             CHHHHHHHHHH----HHCCCCCCCEEEEEEECCCCCHHHHHHH--HCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             02433344443----1013478722799850764317899999--75995999943732102256654311531024688
Q batch____       157 DPICNAYKSIA----QQSKFLPGQDVVVIGTGPLGLFSVQMAR--IMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGS  230 (358)
Q Consensus       157 ~~~~~~~~~~~----~~~~~~~~~~~v~~~~g~vG~~~~~~a~--~~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (358)
                      .....+.....    ..........+++.+.+++|..++++++  ..|+.+++.+................+.+...++.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~~g~~~~~~~~~~~~g~~vv~~~~~~~~~~~~~~~~~~lga~~~~~~~  230 (357)
T c2vwpA_         151 PISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQ  230 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCSEEEEEECCCSSCHHHHHHHHTTCEEEETTT
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCH
T ss_conf             77888999999988763375665459995035410789999999708978999925510006678765207726983830


Q ss_pred             CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCC-----CCCCHHHHHHCCCEEEEEECCCH
Q ss_conf             6358888643201564122110356620368888750589558986157876-----66788999754707999976998
Q batch____       231 TEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKP-----LDFSINDITAWNKSIIGHMAYDS  305 (358)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~  305 (358)
                      +.........    ...+..++..............+...+..+.++.....     .......+..+++++.|+..++.
T Consensus       231 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  306 (357)
T c2vwpA_         231 TPVEDVPDVY----EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHV  306 (357)
T ss_dssp             SCGGGHHHHT----CCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCH
T ss_pred             HHHHHHHHCC----CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHEECCEEEEEEECCCH
T ss_conf             4578997335----652047641246413788999840798199997117866566610003453100137999975898


Q ss_pred             HHH-HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             999-99999998689976432145730999999999998799624999716
Q batch____       306 TSW-RNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYD  355 (358)
Q Consensus       306 ~~~-~~~~~ll~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvVi~~~  355 (358)
                      .++ +.+.+|+++|+++++++|+++|+|+|+++||+  +.+..||+||+|+
T Consensus       307 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~--~~~~~gKvvi~~~  355 (357)
T c2vwpA_         307 EHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFD--DDDTTIKTAIEFS  355 (357)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGC--CSTTCCEEEEECC
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH--CCCCEEEEEEEEE
T ss_conf             999999999998589986525413630899999998--0998217999971