BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (335 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacter... 553 e-156 UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gamma... 381 e-104 UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammap... 332 1e-89 UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewan... 314 2e-84 UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewan... 309 1e-82 UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alterom... 289 1e-76 UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Altero... 285 1e-75 UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteob... 250 5e-65 UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 ... 248 2e-64 UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina R... 245 1e-63 UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root R... 216 8e-55 UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudom... 144 3e-33 UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Ta... 131 3e-29 UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Morit... 130 9e-29 UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 T... 129 1e-28 UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcu... 126 1e-27 UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marino... 121 3e-26 UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pse... 115 2e-24 UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine ... 114 3e-24 UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccha... 113 8e-24 UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1... 113 8e-24 UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9... 112 2e-23 UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marino... 110 6e-23 UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriav... 109 1e-22 UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocy... 101 4e-20 UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=... 97 9e-19 UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2... 91 6e-17 UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauer... 91 8e-17 UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reineke... 87 7e-16 UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobact... 86 3e-15 UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH... 85 3e-15 UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chej... 84 6e-15 UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacte... 82 3e-14 UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinom... 77 1e-12 UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis... 74 6e-12 UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus... 73 2e-11 UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 ... 66 1e-09 UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. ... 65 3e-09 UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuni... 62 3e-08 UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinob... 59 2e-07 UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escheri... 59 3e-07 UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax... 57 8e-07 UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudom... 53 2e-05 UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingo... 52 3e-05 UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alterom... 42 0.022 UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syr... 42 0.023 >UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacteria RepID=NDPA_SERP5 Length = 336 Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust. Identities = 266/335 (79%), Positives = 300/335 (89%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 MSLDI+QIALHQL+KRDEQ L++VLRDSLL V EM+ ELHRVYSAK+KAYGLF+E Sbjct: 1 MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEG 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 SELA LR R+ ++DFLAFSRAATGRLRDELAKYPFA+GG VLF YRYLAVEYLL+AV Sbjct: 61 SELADALRTCRKEDKDFLAFSRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAV 120 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L++ +S RVNE LDIN THYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV+D Sbjct: 121 LNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVSD 180 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 FFMDFL A+EGL+ KAQNRGLLQAVDD+ A+AQLDK ERQ+VRQQVYSYCNEQLQAGEEI Sbjct: 181 FFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI 240 Query: 241 ELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML 300 EL+ LSKE+A V E F +F++E+GY+LE+SFPADR TLRQLTKFAGSGGG+++NFDAML Sbjct: 241 ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAML 300 Query: 301 LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LGERIFWD ATDTLTI+GTPPNLRDQLQRR + GN Sbjct: 301 LGERIFWDAATDTLTIRGTPPNLRDQLQRRQNSGN 335 >UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gammaproteobacteria RepID=NDPA_ALISL Length = 338 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/332 (56%), Positives = 245/332 (73%), Gaps = 2/332 (0%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MSL ++ + LH+L+K ++ LE+ LR+ LLE E +V+ELHRV+++K K +G+F Sbjct: 1 MSLILSNVILHKLVKNEQDELEVCLRNQLLENEEFTEALVSELHRVFNSKAGKGFGIFKT 60 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 ESE L R+ E FL FS + +L+ EL KYPFA+ G ++ Y+ LA EYL VA Sbjct: 61 ESEFGHWLGSVRKNETPFLEFSNKSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 VL + SM+V + L+I+ T YLDI DI ARIDL+ WET+ +S RYLTF+KGRVGRKV+ Sbjct: 121 VLPSNESMKVTDELNISATDYLDIAKMDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVS 180 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 DFF+DFL A G++ K QN+ L+QAV+DF A+ +L+K E+Q R+QVY YCN QLQAGEE Sbjct: 181 DFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLEKEEKQQYRKQVYDYCNGQLQAGEE 240 Query: 240 IELKSLSKEL-AGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + +K LS EL S +F +FA E+GYELEESFP DR+ LR+LTKF G+GGGL++NFDA Sbjct: 241 LTVKELSGELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 MLLGER+F+DP TDTLTIKGTPPNL+DQL RR Sbjct: 301 MLLGERVFYDPETDTLTIKGTPPNLKDQLTRR 332 >UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammaproteobacteria RepID=NDPA_MANSM Length = 355 Score = 332 bits (851), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 171/355 (48%), Positives = 224/355 (63%), Gaps = 20/355 (5%) Query: 1 MSLDINQIALHQLIKRDEQN--------------------LELVLRDSLLEPTETVVEMV 40 MS+ +NQI LHQ+IK N LE VLR LL T + + Sbjct: 1 MSITVNQIVLHQIIKPASANIPANNNNETENGETATQNTQLETVLRQELLPITAEAEQFM 60 Query: 41 AELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADG 100 ELH+ Y K K YG+F E+S AQ+L + E DFL FS A L ELAKY FA+ Sbjct: 61 LELHQAYQNKTKGYGVFQEQSRFAQSLNRLLERETDFLPFSYEAAKLLSSELAKYAFAES 120 Query: 101 GFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN 160 G + C Y +LA +YL +A+L + +S+ V+E L+I+ T YL+IN DI ARI+LT+ N Sbjct: 121 GTFVLCRYNFLATDYLFIALLDSKASVLVDEKLEIHRTQYLNINQFDIAARINLTDLRVN 180 Query: 161 PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQ 220 S RYLTF+KGRVGRK+ DFFMDFLGA EGLN + QN+ LLQAV D+ + +L + Q Sbjct: 181 ANSNRYLTFIKGRVGRKIGDFFMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQ 240 Query: 221 NVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLR 280 V++QV+ YC Q+ AG+EIEL LS+ + +++ F +FAAE+ Y LE + P RS L+ Sbjct: 241 AVKKQVFDYCKGQINAGDEIELTELSETIPTLNQQPFADFAAEQDYGLENNIPPVRSALK 300 Query: 281 QLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LTKF+GSG G+TI+FDA LL +RI+WD DTLTI G P NL+DQLQR N Sbjct: 301 SLTKFSGSGKGVTISFDAELLDKRIYWDDMQDTLTIHGLPANLKDQLQRLLKNHN 355 >UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewanella RepID=NDPA_SHEAM Length = 342 Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 154/341 (45%), Positives = 224/341 (65%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSE 59 M++ + Q +H++ + E L LR L ++ V M+ ELH+ Y++K+ K +G F Sbjct: 1 MTIKVEQAIIHEIAQTHEGQLSCRLRPQPLLNSQAVELMLEELHQSYTSKSGKGFGFFGT 60 Query: 60 ESE-------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 A L+ G F+ F+ A+ L+DEL KY F+ GGF+L Y ++A Sbjct: 61 HGNDGEANPAFANCLKDYLDGGLGFVEFTGVASKLLQDELGKYDFSQGGFLLLACYSHMA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL VA+LS SSM V +++++ ++LD+N+ + ARIDLTEW+ + ES +Y++F++G Sbjct: 121 SDYLFVALLSAKSSMTVLDDMELTQVNHLDLNNIQLAARIDLTEWQADKESRKYISFIRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF A ++L K ERQ R +V+ YC+E Sbjct: 181 RAGRKVADFFLDFMGCVEGINPKAQNKSLMIAVEDFVAGSELTKDERQACRDKVFEYCSE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + AG E+++K L+ ELA SF +FA Y+LEE FP D+STLRQL KF+G+GGG+ Sbjct: 241 RFDAGAEVDIKDLADELADSGMDSFYDFATTGNYDLEEEFPVDKSTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 TI+FD LGER+ +DP +DTL IKG P NL+DQL RR G Sbjct: 301 TISFDGHHLGERVIYDPISDTLLIKGVPANLKDQLHRRLKG 341 >UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewanella RepID=B0TK49_SHEHH Length = 342 Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 219/341 (64%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MS+++ Q +H + + E L LR L ++ V M+ ELH+ Y+ K K +G F Sbjct: 1 MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGI 60 Query: 60 ESE-------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E L R GE F+ FS A L++EL+KY F+ GGF+L Y Y+ Sbjct: 61 SGEDGEANTKFEDALTTYRSGELGFVEFSGIAGKLLQEELSKYDFSTGGFLLLSCYTYMT 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL V++L+ SSM V ++++++ +LD+N+ + ARIDLTEW+ +P+S +Y++F++G Sbjct: 121 SDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARIDLTEWQADPDSKKYISFVRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF ++L K ERQ R++V+ YC E Sbjct: 181 RAGRKVADFFLDFMGCVEGVNIKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + G I++K L+ ELA SF +FA YELEE FP D+ TLRQL KF+G+GGG+ Sbjct: 241 RCDEGASIQIKDLADELADQGVDSFYDFAQGGDYELEEEFPGDKPTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 T++FD LGER+ +DP +DT+ IKG P NL+DQL RR G Sbjct: 301 TLSFDGQHLGERVIYDPVSDTIIIKGVPANLKDQLDRRLKG 341 >UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alteromonadales RepID=A0Y6R2_9GAMM Length = 338 Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 219/332 (65%), Gaps = 4/332 (1%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 M+ D+ ++ +H + K+D+ + ++ LR+ + + V + +LH ++ K K Y FS Sbjct: 1 MTTDVKKLVVHYVDKKDD-DTQIHLRNDEMIINDKVAVFIEQLHHAFTGKPGKGYCAFSG 59 Query: 60 E--SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 E S +A +++ R E F + A+ L++EL KY F + G+++FCHY+Y+A +Y+L Sbjct: 60 EKNSIVASSMQSYRNNELGFWHLTEQASTVLKEELDKYAFNETGYLVFCHYQYVATDYML 119 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +A+++ + LD+ + +LDI+ + ARIDLT W+T PE RY++F+KGR GRK Sbjct: 120 IAMINIKEHYSMTSELDLAASRHLDISRMQLAARIDLTAWDTQPEDNRYISFIKGRAGRK 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 VADFF+DFLG EG++ K Q++ +L AV+D+ +E Q DK+E+ ++R+QV+ YCN+ + G Sbjct: 180 VADFFLDFLGCEEGVDPKQQSQVMLNAVEDYLSEQQFDKSEKDDLRKQVFDYCNDCVTTG 239 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 EE + LS ++ + F F ++ Y+LEE+FP D+ T+ + KF+G GGG++++F+ Sbjct: 240 EEASVTELSAAISKGDDSPFDSFCKDQSYDLEETFPVDKKTVTSMVKFSGLGGGVSVSFE 299 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 LGER+ ++ ATDTL IKG PPNL+DQLQR Sbjct: 300 RKHLGERVTYNEATDTLVIKGIPPNLKDQLQR 331 >UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Alteromonadales RepID=A1SWZ3_PSYIN Length = 351 Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 224/338 (66%), Gaps = 12/338 (3%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 M++ + I LH L E L+ +R+ L + ++ E + +LHR Y +K NKA+ F + Sbjct: 1 MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGD 60 Query: 60 ESELAQTLR------LQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 +++ + R + +Q DF+ FS+ L +EL K+ FA+ G +L Y + A Sbjct: 61 KTDKSPLFREALTDYMSQQL--DFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTAS 118 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 +YL +A+L N S+ VNENL++ + +++ + +VARIDLT +P+S RY++F+KGR Sbjct: 119 DYLFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLTLLARDPQSNRYISFIKGR 178 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 GRKV+DFF+DF+GA EG +AK QN+GL++AVD+F L A+++ VR+ + YCNEQ Sbjct: 179 AGRKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQ 238 Query: 234 LQAGEEIELKSLSKELAGVSEV--SFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGG 291 L+ G++IEL LS++L ++ SF +F +E Y+LE SFP DRS +R+LTK+ G GGG Sbjct: 239 LKQGDDIELSVLSEQLQDSPKLEGSFYDFVSE-DYQLENSFPVDRSVVRKLTKYVGQGGG 297 Query: 292 LTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 ++I+FD LGERIF+D +DTLTI+G PPNLR+QL+R Sbjct: 298 ISISFDQKHLGERIFYDANSDTLTIQGIPPNLREQLKR 335 >UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteobacteria RepID=B4RYJ6_ALTMD Length = 368 Score = 250 bits (638), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 135/366 (36%), Positives = 207/366 (56%), Gaps = 34/366 (9%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MS I+ +H+LI E+ +E + RD+ L T + + +++ ++AK K G F Sbjct: 1 MSALIHHFVVHRLIVNKEEKIEAIPRDNCLAVTPEIELLAHQINHSFNAKPGKGVGHFVS 60 Query: 60 ESE---------------------------LAQTLRLQRQG----EEDFLAFSRAATGRL 88 E L Q L +Q++ E+ F AFS +AT RL Sbjct: 61 EVTREAKIENEEGETTTEKSTENVAEFAEGLKQYLEVQKEAGDNVEDAFHAFSVSATQRL 120 Query: 89 RDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADI 148 LA+ + GF++FC Y YLA +YL++A+L+ S + V +LD++ +LD+ + Sbjct: 121 VRTLAETGTVETGFLIFCQYEYLATQYLMIALLNTRSHVEVTNSLDLSAREHLDLAKMQL 180 Query: 149 VARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDF 208 R DLT+W+ PE RY++F+KGR+GRKV+DFFM F+G E ++ K QN+ L+ +VD + Sbjct: 181 AVRFDLTQWDIQPEQQRYVSFIKGRMGRKVSDFFMQFVGCEELVDVKQQNKQLISSVDAY 240 Query: 209 TAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS--FTEFAAEKGY 266 A LD E+ R++V SY E++ AGE + + L+ L E S F F Sbjct: 241 LASESLDPQEQHQHREEVKSYFKEKIDAGESLSVNELANRLPQNEETSSNFKAFTESLEV 300 Query: 267 ELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQ 326 LE D + L+QL KF G GGG++++F+ L+G+R+F+DPATDTLTI+G PPNL+DQ Sbjct: 301 PLENEIQPDPAALKQLAKFTGQGGGVSVSFERKLMGDRVFYDPATDTLTIRGIPPNLKDQ 360 Query: 327 LQRRTS 332 L R++S Sbjct: 361 LNRQSS 366 >UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481E3_COLP3 Length = 351 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 134/341 (39%), Positives = 207/341 (60%), Gaps = 16/341 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLR-----DSLLEPTETVVEMVAELHRVYSAK-NKAY 54 MSL IN IALH L K++E E+VLR + V V LH +Y+AK +KAY Sbjct: 1 MSLIINNIALHFLSKKEETG-EVVLRLGPENAEFAQENAKVTNFVDGLHAIYNAKGSKAY 59 Query: 55 GLFSE---ESELAQTLRLQRQ---GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY 108 G FS E + A+ + L +++F FS A L++E+ KY + G+ + CHY Sbjct: 60 GSFSSMPSEGDSARFVDLMESYLTEQQNFYDFSVQAGNVLKNEIEKYDIEETGYFVICHY 119 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 Y+ YL VAV+ V+ L+I+ +LD N + ARIDL +++ N + RY++ Sbjct: 120 EYMGGRYLFVAVIPVSEHYSVDGELNISAAQHLDTNKLQLAARIDLFDYKDNSQGNRYIS 179 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 F+KGR GRKV+DFF+DFLG EGLN+K Q + L+QAV+D+ + QLD AE+Q R+ + S Sbjct: 180 FVKGRAGRKVSDFFLDFLGCEEGLNSKEQTQTLVQAVEDYVSVNQLDPAEKQKTRKDLLS 239 Query: 229 YCNEQLQAGEEIELKSLSK--ELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFA 286 YC EQ + +++ L+ + K E AG +E F +F + Y +EESFP +++ + ++TK++ Sbjct: 240 YCKEQKASSQDVSLQEVGKVIESAG-TEQDFYQFCQTQSYPIEESFPHEQAVVNKITKYS 298 Query: 287 GSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 G G G++++F+ GE + ++P D+L I PPNL++QL Sbjct: 299 GYGNGISLSFERSHFGEDVVYNPHNDSLIIYKVPPNLKEQL 339 >UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina RepID=Q5R0C1_IDILO Length = 347 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/342 (40%), Positives = 213/342 (62%), Gaps = 14/342 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSE 59 M L I + +HQ + D Q + L L S L + + +++ EL VY++K K Y F + Sbjct: 1 MQLRIEESIIHQFYQNDGQ-VGLRLAPSALTEDDQLHDLLVELTDVYTSKPAKGYASFLK 59 Query: 60 ESE------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 + E + L G+ DF+ FS+ + L ++L Y + GF+L Y++++ Sbjct: 60 DEEEGEPGPFPEHLTSWYDGQLDFVEFSQQSAKLLLEQLQNYNLLEAGFLLVTRYQHIST 119 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 EYLLV L + +N L ++ + LDI + ARIDLTEW+T+PES RY++F+KGR Sbjct: 120 EYLLVCFLPVKEGVTINPELAVDRSSQLDITKVQLAARIDLTEWKTSPESERYISFIKGR 179 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 GRKV+DFF+DFLG +E LN+KA + L+ +V ++ +++L+ +RQ + + Y YC++Q Sbjct: 180 AGRKVSDFFLDFLGCTERLNSKAHTQQLVDSVQEYAKQSELETEQRQALNKAAYEYCDDQ 239 Query: 234 LQAGEEIELKSLSKELAGVSEV-----SFT-EFAAEKGYELEESFPADRSTLRQLTKFAG 287 + G+ +++K LS++ A V SF+ +FA + EL + FPAD+STLR+L KF G Sbjct: 240 WKQGDTVKIKDLSEQFAEQYPVEKSFESFSKDFAEQNSRELVDDFPADKSTLRKLVKFQG 299 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 GGG+++ FD LGER+ +D ATDTLTI GTPPNLRDQL+R Sbjct: 300 QGGGVSVGFDHTALGERVHYDAATDTLTINGTPPNLRDQLRR 341 >UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root RepID=NDPA_PSEA7 Length = 340 Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 192/334 (57%), Gaps = 4/334 (1%) Query: 3 LDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + I +H + K+ D L RD+ L ++ + ++A+L+ Y+AKNKA+G F ES Sbjct: 1 MPIKHAIVHLIEKKPDGTPAMLHARDAELGDSQAIENLLADLNESYNAKNKAWGFFQGES 60 Query: 62 ---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + L +G+ DF+ FSR A L+ + + + GG +LF HY+ +YL + Sbjct: 61 GAYPFSGWLGDYLEGDRDFVGFSREAVEHLQKLMEESNLSTGGHILFAHYQQGMTDYLAI 120 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV 178 A+L + + VNE+L++ P+ +LD+ + ARI+++EW N +S +Y++F+KG+ G+KV Sbjct: 121 ALLHHSEGVAVNESLEVTPSRHLDLAQLHLAARINISEWRNNKQSKQYISFIKGKGGKKV 180 Query: 179 ADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGE 238 +D+F DF+G EG+++ ++ R LL+A DF + + + + + + Y Q + GE Sbjct: 181 SDYFRDFIGCQEGVDSPSETRTLLKAFSDFVESEDMAEEQAREKTETLVDYATSQARIGE 240 Query: 239 EIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + L +LS+ + +F ++ K Y L PAD+ TL Q +F G GL+I+F+A Sbjct: 241 PMTLDALSELMDDQQPRAFYDYIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 LLG RI +D DTL I P LRDQL+RR + Sbjct: 301 HLLGSRIEYDEERDTLRISSLPTQLRDQLKRRKA 334 >UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudomonas sp. ND6 RepID=Q6XUL1_9PSED Length = 253 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 5/214 (2%) Query: 3 LDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 + I I +HQ+ K+ D L RD+ L ++ V M+A+L+ Y+AK KA+GLF E Sbjct: 1 MPIRHIIVHQIDKKPDGTPAVLHARDTELGASQAVENMLADLNESYNAKQGKAWGLFHGE 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 S ++ L+ +DF AFSR A L+ + + + GG VLF HY+ +YL Sbjct: 61 SGAYPFSRWLKDYLDENQDFTAFSRHAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLT 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 VA+L + + VN+ LD+ P +LD+ + ARI+++EW+ N +S +Y++F+KG+ GRK Sbjct: 121 VALLHHSEGVAVNDTLDVTPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGRK 180 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE 211 V+D+F DF+G EG++A +N Q + F E Sbjct: 181 VSDYFRDFIGCQEGVDAPRRNPHPAQGIQRFRRE 214 >UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5W5_PELCD Length = 344 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 165/332 (49%), Gaps = 10/332 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEES 61 ++I+ +H + K QN +L LR+ L + + E++ L ++Y+ K + YG+F +++ Sbjct: 12 VEIHNAIVHLVKKERHQNPDLRLREEPLPVDDKLSELITSLRKLYNEKTARGYGVFHQDT 71 Query: 62 ---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 L+ +L E DF+ FS A L ++ A GG++L Y ++L+V Sbjct: 72 INYPLSTSLNGHLNNEVDFVEFSHNAMRTLVAKVTGVQLATGGYILLASYNENNADFLIV 131 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK- 177 A + + + ++NL++ + ++D+ H +AR+++T W N E RYL+F K R G Sbjct: 132 ASIKHRPGLAFDQNLNLTGSVHIDLEHLHEMARVNVTSWLNNGE--RYLSFAKRRGGDDG 189 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 +D+F +F+G E N+ N+ L+AV F + LD R+ + V++Y +E+ A Sbjct: 190 FSDYFREFIGCEEFCNSTEMNKITLRAVKAFGDQRNLDAETRRQLHAAVFNYFDEKRLAK 249 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKG--YELEESFPADRSTLRQLTKFAGSGGGLTIN 295 E + L +LS + +F F E Y L + F ++ + L F G + I Sbjct: 250 ETVSLAALSHRIDDEQPEAFLTFINENAEEYPLGDGFDPVKNIYKGLKTFVIKDGSVKIQ 309 Query: 296 FDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 F+ G R+ + A +L I+ P+ QL Sbjct: 310 FNQEDFGTRVILN-ADQSLLIRELNPDFIRQL 340 >UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Moritella sp. PE36 RepID=A6FIF0_9GAMM Length = 343 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 137/257 (53%), Gaps = 5/257 (1%) Query: 75 EDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLD 134 E+F+AFS AAT + +L + GG++ F HY Y +L + +L + + ++ +L Sbjct: 83 ENFVAFSDAATRYFKQKLDGTGASKGGYLWFNHYTYNEENFLSIVLLRKKNGLALSNDLT 142 Query: 135 INPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNA 194 ++ LD++ + ARI+LT W + STRY+ F GR + V ++F F+G E A Sbjct: 143 LDQIEQLDLDKLHMAARINLTAWLSGA-STRYIAFRIGRGAKDVTEYFAKFVGCEEYTRA 201 Query: 195 KAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKEL--AGV 252 +A + L+Q + A + ++V+Q V+ CN L GE + L+ +S+ L + Sbjct: 202 RADTQNLVQVTKRYCANNNFSDDKSEDVKQFVFERCNTWLDEGEPVLLERISELLDSSFT 261 Query: 253 SEVS--FTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPA 310 EV F E A + L P ++S LR LT+++G L+++FD+ L+ +F++ + Sbjct: 262 PEVQGRFLEIAQGDPFFLSNEIPIEKSALRGLTRYSGKTQKLSLSFDSDLINISVFYNES 321 Query: 311 TDTLTIKGTPPNLRDQL 327 + + I P L++QL Sbjct: 322 DEEIRITDVPIKLKEQL 338 >UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 Tax=Vibrio cholerae MZO-3 RepID=A2PW68_VIBCH Length = 351 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 175/348 (50%), Gaps = 23/348 (6%) Query: 2 SLDINQIALHQLIKRDEQ-NLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 +++I + LH LIK ++ +EL R E E+ +++ ++ +++ G F E+ Sbjct: 3 AMEIKNVILHNLIKEEKSTKVELDDRKKENEVNESALQLSKGINEKFNSTGLNTGHF-EK 61 Query: 61 SELAQTL--------RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E+ + L + +G ++F+ F+++A L+ +L P A GG + F HY + Sbjct: 62 PEVDEQLTHFEFLLEKYYNEGFDNFVGFTKSAATYLQKQLMSAPSAKGGHLWFNHYTHAG 121 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET-NPESTRYLTFLK 171 +L V +L MR+++ L++ +D++ + ARI+LT+W+ + +S RY++F Sbjct: 122 EHFLSVVLLREKMVMRIDK-LELEQFDSVDLDKLHMAARINLTKWQNADEQSNRYISFKI 180 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G+ +KV D+F F+G E A + L++ ++++ D+A+ + V+ + + Sbjct: 181 GKEAKKVTDYFAKFIGCKEFTQAATDTKALVKCIEEYCRHHLFDEAKTEMVKNKAHDQIV 240 Query: 232 E-QLQAGEEIELKSLSKELAGV---------SEVSFTEFAAEKGYELEESFPADRSTLRQ 281 E + + + I L +LS L + F + + + L D + LR+ Sbjct: 241 EWRKEEKQTIHLDTLSTVLDATFLPEDVDEDKKGQFLRISQGEPHNLNNELATDPNALRR 300 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPAT-DTLTIKGTPPNLRDQLQ 328 L K++G ++++FDA LLG + ++P LTI P L+DQL+ Sbjct: 301 LKKYSGRNKHISLSFDAKLLGNSVVYNPENGGVLTITEIPKTLKDQLE 348 >UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K1V2_AZOSB Length = 339 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 12/335 (3%) Query: 1 MSLD--INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLF 57 MS D I Q+ +H+L+K + +V RD L P + +V +L ++ ++ K +G F Sbjct: 1 MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTF 60 Query: 58 SEESELAQTLRLQRQ----GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 ++ E RL R+ E F+ + LR+ +GG L R AV Sbjct: 61 EDDEEEFPVARLLREFSGDDERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAV 120 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 ++L +A++ + V+++L+++ +LD++ VARIDLT W E R + FL GR Sbjct: 121 DWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDLTGWRRGDE--RCVAFLSGR 178 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 A F FLG + + A + R L+QA+ DF +LD R + ++ + Y ++ Sbjct: 179 --GPAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDL 236 Query: 234 LQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 +AG +EL +L+ EL + L +F +R L+ L + + S Sbjct: 237 GEAGAPVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWR 296 Query: 294 INFD-AMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 + F+ A L + +D +DTL + PP L+ L Sbjct: 297 VEFERAGLRSGAVSYDVVSDTLVLSNLPPYLKQML 331 >UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marinobacter RepID=A1U492_MARAV Length = 338 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 9/317 (2%) Query: 19 QNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE---ESELAQTLRLQRQGE 74 Q LV ++L EP + ++ R++++K K YG FS+ E + L+ + + Sbjct: 18 QPARLVAGEALQEPGGDYEALHKQMKRLFNSKPGKKYGRFSDDIGECPFSAWLKDYLEDK 77 Query: 75 EDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLD 134 + F A + G+ ++ L G ++ H E + + +L S+MR + + Sbjct: 78 QTFAAMTDRLFGQWQELLTGSQEEFDGHLMIVHDALADAEVVYLFILETDSAMRFDGSQK 137 Query: 135 INPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNA 194 ++ T L ++ ++ RI+L +W S Y+T + GR + F+ + ++ Sbjct: 138 LDATDVLSLSRLNLAVRIELDDWRNANGSENYMTLIHGRGTGDPGELFIRLCAFTNSVDV 197 Query: 195 KAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE 254 + + L AV+ F ++ +KA VR + Y +C +Q GE +E+++LS L Sbjct: 198 EKETMTFLDAVEAFAKTSEPEKA--GEVRAKAYEFCKDQHALGEPVEIEALSNYLDESQP 255 Query: 255 VSFTEFAAEKGYELEES--FPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATD 312 F EFA++ EL E+ D +++L + AGSGGG++++F + L+ + +++D D Sbjct: 256 QRFKEFASQNA-ELPETGVLHPDHRKVKKLVRIAGSGGGMSVSFSSDLVNQAVYYDRDKD 314 Query: 313 TLTIKGTPPNLRDQLQR 329 LTI P LR+QLQR Sbjct: 315 ALTITRLPKALREQLQR 331 >UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KBR4_PSEPF Length = 346 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/340 (24%), Positives = 164/340 (48%), Gaps = 19/340 (5%) Query: 3 LDINQIALHQLIKRDEQN----LELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFS 58 +DI + +H ++K E N + + R +L + + + ++ +Y+ + YG F Sbjct: 1 MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFG 60 Query: 59 E-ESELAQTLRLQRQGE-EDFLAFSRAAT----GRLRDELAKYPFADGGFVLFCHYRYLA 112 + + + L E D + FS A R++D+ A + LF Y Sbjct: 61 QGPAHPFPNIMLDYSSEGSDIIEFSNTACDLIAARMKDQF----MATTSWPLFVRYTNQG 116 Query: 113 VEYLLVAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLK 171 ++LL+A+L + ++E LD+N + DI+H ARID+ +W++N + YL+F+K Sbjct: 117 RDWLLIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIEKWQSNQQP--YLSFIK 174 Query: 172 GRVGR-KVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 R G ++ +F + +E +AK ++A++D+ D Q R ++Y++C Sbjct: 175 RRAGESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFC 234 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGG 290 NE+ Q + L +LS + F ++ E YE+ E F + +T ++L + + G Sbjct: 235 NERKQEEAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFG 294 Query: 291 GLTINFDAM-LLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 ++++FD L E +++D D++ IK P L +++ Sbjct: 295 SISVSFDVNDLRTETVYYDSDADSIIIKRPPVELVRDMKK 334 >UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFM6_9GAMM Length = 333 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 8/288 (2%) Query: 49 AKNKAYGLFSEESE---LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF 105 + K YG F ES+ L +R QG F S+ L+ ++ + A ++ Sbjct: 49 SSQKQYGFFDRESDDNPLPGWIREHHQGTSSFSRVSQRILEHLQQKMGENDEAFSADLMI 108 Query: 106 CHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTR 165 + + L + + ++ + +++ +LD+ + Y+D N AR+ + EW +S + Sbjct: 109 AVDSVMDQDQLYIFWIDHVDASQIDHSLDVVHSRYIDSNKMAYSARVFVDEW-LQEDSQK 167 Query: 166 YLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQ 225 Y++ + R + ++D F FLG S G+N + L VD + DK + R Q Sbjct: 168 YMSLITSRGSKPISDAFSGFLGFSTGVNLIEETHEFLSIVDQYAQSLPEDKVS--DHRGQ 225 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKF 285 + YC +Q + G + + +S++L +F+EF AE+ DRS+L++ ++ Sbjct: 226 ILEYCVDQDKQGAPVVFEDISRQLDEGQPSNFSEFVAERQQAPAVEMYTDRSSLKRYVRY 285 Query: 286 AGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 G ++I+F A + G+ I +D TLTIK P +L+ QL +T+G Sbjct: 286 FGRDKNMSISFSADMFGQEIVYDEVAGTLTIKQIPKSLKQQL--KTTG 331 >UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS0_SACD2 Length = 348 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 143/291 (49%), Gaps = 17/291 (5%) Query: 52 KAYGLFSEE---SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY 108 K YG FS++ LA L + F +F+ A ++ EL K G F +F H Sbjct: 52 KDYGRFSDDRANHPLASWLEEYHAEKMSFESFTAKAMAHIKLELDKTEVVTGAFFVFAHE 111 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW--ETNPESTRY 166 + ++L + + + S ++ L++ + YLD + + A+I+L +W E Sbjct: 112 KLEEADFLHIYFVQHNSGQYIDAELEMAESFYLDTDGVRLAAKINLDDWLGEDVHRKNNA 171 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQV 226 +T L+ R +++++ F +G +E ++ A+ L+ V+++T E L ++ + QV Sbjct: 172 VTLLRWRGEKELSEVFEASIGFAEKIDLTAETEAFLEVVNEYTKE--LPDVVKEYTKAQV 229 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVSEVS----------FTEFAAEKGYELEESFPADR 276 YC EQ + G+ + +K LS +L ++ F+EF + + D+ Sbjct: 230 VDYCMEQDKVGKPVVIKELSTQLIEAPKLPTEESYTPPPPFSEFIKQNKPLAKPELIPDK 289 Query: 277 STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 + LRQ + +G L+++F + LG+ + +D +D+LTIK PP+L+ +L Sbjct: 290 AKLRQYVRISGRNDFLSMSFASSCLGDTVVYDAESDSLTIKNIPPSLKSRL 340 >UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PB69_CELJU Length = 342 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 12/334 (3%) Query: 3 LDINQIALHQLIK-RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEE 60 + + I H+L + R E + R LL + E+ L + K K+YG FS + Sbjct: 1 MALTAIIAHRLYRHRPEDTVTTQARADLLPMNGKLEELAYALKTQFIRKGGKSYGRFSSD 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 + A L+ RQG F +FS+ + L P F+ + A +YL Sbjct: 61 TGEFPFAAWLQDYRQGRLGFASFSQKNLQHFQQLLEAAPSLFDVFLFVIEEQIEAGQYLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + V+ + S + ++ +L + + YLD + ++ A+I+ +W+ +T YLT ++ R + Sbjct: 121 LFVVEHESGLYLDADLQLTDSVYLDTANLNLAAKINCADWDAGNSAT-YLTLMRSRSDKD 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 AD F G S+ + K + + L+ V++FT LD+ + R +V YC EQ +AG Sbjct: 180 FADAFGALTGFSDKYDVKTETKEFLEVVENFT--QTLDEPVARLTRTRVADYCLEQNKAG 237 Query: 238 EEIELKSLSKELA----GVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 + + + L+ LA G +F F A + E++ F +R + +G L+ Sbjct: 238 KPVAINELAHTLATETKGYEPETFERFVATQKPEIKAEFIPHAGQVRSYVRLSGRTDSLS 297 Query: 294 INFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 ++F + LG I +DP D L IK P L+ QL Sbjct: 298 MSFASDCLGRDIEYDPERDLLMIKSIPTALKKQL 331 >UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9 Tax=Enterobacteriaceae RepID=Q6D0T8_ERWCT Length = 335 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 21/335 (6%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVV-----EMVAELHRVYSAKN-KAYG 55 ++++ + +H L K +QN + R L P E +V ++ ++ Y+ + K YG Sbjct: 5 AIEVKHVVVHILDK--QQNGDASER---LSPEEGMVTEASQRLINDICAKYAGRTGKGYG 59 Query: 56 LFSEESELAQTLRLQRQGEEDFLAFSRAAT---GRLRDELAKYPFADGGFVLFCHYRYLA 112 F +++ R+ +D F R++ L + + A GG+VLF H Sbjct: 60 YFEGDTDNYPMERMAGDYLDDTDDFYRSSCRMMHHLTERSQRENMATGGYVLFAHIEIGN 119 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 E+LL+A++S V ++ +I + YLDI + RIDLT WE+ E RY++FLKG Sbjct: 120 NEHLLIAIVSATIGSTVTDDFNIQDSTYLDIAKLRMAGRIDLTAWESGAE--RYISFLKG 177 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 + V+++F FLG ++ L AK ++ L + F AE L+ AE+ + + + Sbjct: 178 Q--GNVSNYFKQFLGCNDVLIAKRESEKLRDTLTAFAAEKNLEGAEKDAFLKGAFEHLQA 235 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 +AGE + L++ + + + A + L + F D +R L F G Sbjct: 236 LSKAGEPLSLETFVNAVWPHAPEELSSKLAAEELGLSDGFVPDGRVIRALVSFKGKSKYW 295 Query: 293 TINFD--AMLLGERIFWDPATDTLTIKGTPPNLRD 325 + FD G+ I +DP T+ +T++ P RD Sbjct: 296 ELKFDREGTTSGD-IDYDPETNIITLRNVPDEFRD 329 >UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marinomonas RepID=A6VYD3_MARMS Length = 342 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 5/257 (1%) Query: 76 DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDI 135 DF F++ L A+GG + F HY +L + +L + + +L + Sbjct: 83 DFAGFTKECAAEYLKYLEPVEEAEGGLLWFNHYELHDTHFLYIVMLKRKKGIGLGADLSL 142 Query: 136 NPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAK 195 + +++ + RI+LT W+ E RY++F GR + +++F F+G E A Sbjct: 143 SQIEQIEMEKLHMSLRINLTAWQAGDEG-RYISFRFGRAPKFESEYFTQFIGCDEPKVAA 201 Query: 196 AQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV 255 + R L+ F + ++ V +C + Q E + +K ++ ++ V Sbjct: 202 KETRKLVDLTAAFCQSEGFPSKQANEFKKVVSEHCQAKAQDREPLAIKEIASQVESRFSV 261 Query: 256 ----SFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPAT 311 F E A +++E+ +++ L++LT+ +GS LTI+FD+ LL E I +D + Sbjct: 262 EQANKFLEIADSDSFKMEKEIFVEKAALKKLTRLSGSSRALTISFDSELLAESIVFDADS 321 Query: 312 DTLTIKGTPPNLRDQLQ 328 TLTIK P +L QLQ Sbjct: 322 GTLTIKDLPKSLLKQLQ 338 >UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84ES1_9BURK Length = 340 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 161/335 (48%), Gaps = 10/335 (2%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF-SEESE 62 +N + +H+L+K +V R + L TE V +++ +H +Y++K +K YG F ++E Sbjct: 4 VNHVIVHKLVKEKLGKASVVERAAALTVTEPVKKLILAIHELYASKASKGYGRFEADEVN 63 Query: 63 LAQTLRLQR---QGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA-VEYLLV 118 + L++ F+ S++ L + P A GG+VL A V + LV Sbjct: 64 YPSSAILRKTFIDQSASFVDGSKSLLSVLSAKAGAVPLATGGYVLMAQVTNAAQVTWFLV 123 Query: 119 AVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 A+++N+ +++ L++ ++D+ + + R++LT+W E RY+ FLK R + Sbjct: 124 AIINNIDGSVIDDKTLEVVDAMHVDLANLRVAGRVNLTDWTNGDEDIRYVGFLKQR--GE 181 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 VAD+F FLG +E + + + L+ + F LD+ ++ + ++YC+++ + Sbjct: 182 VADYFKVFLGCNELIADTEETKKLVGVLKKFAKSQGLDQKAEEDFLKSAFNYCDDRNKND 241 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 E + L++LS E E ++ + F D +++ L + T++ D Sbjct: 242 EPLSLEALSNAAWPHEPKKLQEAFVEGEVQISDGFVPDGRSIKALVRLRYKTDYWTVDID 301 Query: 298 AMLLGERIF-WDPATDTLTIKGTPPNLRDQLQRRT 331 + L + ++ LT+ P L+ +L R T Sbjct: 302 RLALSQGYADYNQKKGELTLLKLPEALKAELDRET 336 >UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4T5_CAPGI Length = 346 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 13/339 (3%) Query: 2 SLDINQIALHQLIKRDEQNL-ELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSE 59 +L+I I +HQL+K + + D +L ++ + L Y K++ +G+FS Sbjct: 7 NLEIKNIIIHQLLKEAGNGIVDAKSADHVLNISDREKLFLGNLDEAYYKKSEIIHGIFSG 66 Query: 60 ESELAQTLRLQ-RQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + L L+ +G+ F FS ++ L + A GG+++ C Y L E LLV Sbjct: 67 NFPKFKDLLLEYTEGKNSFYDFSINVMNHYKEILQRTIAATGGYMILCEYTKLKKELLLV 126 Query: 119 AVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWET------NPESTRYLTFLK 171 +++N VNE +L ++ L+++ DI I+LT+W+ + YL+F+K Sbjct: 127 LMINNKEGFVVNETDLSLSNIKKLELHKVDIACSINLTDWKAIENEDLTTDRKTYLSFVK 186 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G + ++ +FM F+ + LL+A+D+F DK + + V SYC Sbjct: 187 GL--KDISLYFMQFIDVDNKNTSTESTNRLLRAIDEFAKREGWDKERKIQRQDDVCSYCL 244 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGG 291 +++ +EI L +S + + F + A + + + ++S LR L + Sbjct: 245 DRIDKKQEILLSYISAIMDPDNPEKFQDLATDDEFGVSSVINGNKSKLRLLKRITYKDDN 304 Query: 292 LTINFDAML-LGERIFWDPATDTLTIKGTPPNLRDQLQR 329 L + F+ L L + I +D + LTIK P L+ Q+++ Sbjct: 305 LRLEFNTKLFLDKTIIYDEKNNKLTIKNIPELLKQQIKK 343 >UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MQ44_VIBVY Length = 364 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 84/367 (22%), Positives = 168/367 (45%), Gaps = 37/367 (10%) Query: 1 MSLDINQIALHQLIK-RDEQNLELVLRDSLLE-PTETVVEMVAELHRVYSAKNKA--YGL 56 M++ I++ +H+LIK ++E+ L R SLL E+V ++A + +Y KN + YG+ Sbjct: 1 MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGV 60 Query: 57 FSEE-------SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR 109 F ++ + L+ +EDF+ S++ L E FA GG +LF Y Sbjct: 61 FRDDEASGSVPDSFYEYSELEDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYE 120 Query: 110 YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------ETNPE 162 V + L A++ S ++ L + Y+D++ +I+ +++ + + Sbjct: 121 SDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAIKINFSKYNAYQNTDDIERQ 180 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGASEGL-NAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 + YL+F+ + + A +F+ +G G +AKA + ++V F ++ L KA N Sbjct: 181 DSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDL-KAHAPN 239 Query: 222 VRQQVYSYCNEQLQAGEEIELKSL-----------SKELAGVSEVSFTEFAAEKGYELEE 270 +++ + Y ++ ++ E L + +E A F + + + Sbjct: 240 LKRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPP 299 Query: 271 SFPADRSTLRQLTKFAGSGGGLTINFDAMLLG----ERIFWDPATDTLTIKGTPPNLRDQ 326 FP +++ L+ +T G L + FD +G R+++D A + IK P +L D+ Sbjct: 300 EFPVNKTKLKTMTHLVYKGDDLHLEFDKEDIGGNPSARVYFDGA--KVIIKDLPQDLIDK 357 Query: 327 LQRRTSG 333 L ++ +G Sbjct: 358 LNQQING 364 >UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2 Tax=Haemophilus RepID=B8F5A2_HAEPS Length = 323 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 145/306 (47%), Gaps = 10/306 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEES 61 +DI I H L K + +++ + + TET V + +L Y+++ K +G F + Sbjct: 1 MDIKHIIYHILNKEVQGMPQIIPSPNEIPTTETHVNFLTKLTESYASRAGKGFGQFDSDE 60 Query: 62 ELAQTLRLQRQ--GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + R+ R+ +DF A + L ++ + P A GG V H+ +YLL+A Sbjct: 61 DSYPMPRIVREYLVNQDFYAATERMMNTLSTKIQEQPLATGGKVFIVHFAENQNDYLLIA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +LS + + + L + H RI+LT W+ + RY++FLKG+ +A Sbjct: 121 ILSEKMAFSTT-DWQLVEEEVLALEHLKFAGRINLTAWQAGEQ--RYISFLKGQ--GDIA 175 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F FLG ++ L A+ + + L++ +++F E +LD ++ ++ + +E E Sbjct: 176 QYFKLFLGCNDVLIAQQETKKLVERLEEFANEQELDVEQKTEFFERAQEHLHEISNNEEP 235 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD-- 297 ++ + + + + A+ + + F D+ ++++L+ F G ++FD Sbjct: 236 FSAETFANRVWSENPQELKDKLADAENGVADGFIPDKRSIKKLSTFTGKTRHWRLSFDRT 295 Query: 298 AMLLGE 303 A+L G+ Sbjct: 296 AVLSGD 301 >UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZLL6_THASP Length = 338 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 10/335 (2%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEESE- 62 + + LH L++ LVLR++ + + L Y +++ K +G F E+ E Sbjct: 8 VTHLILHALVREPGAPSRLVLREAPCALDAATLRLAERLCAQYESRSAKGFGRFEEDEER 67 Query: 63 --LAQTLRLQRQGEE-DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 LA+ LR E DF A S R++ + +GG ++ R + L VA Sbjct: 68 FPLARWLREHLVDETLDFTALSCQLAERVQAIADEEELEEGGHLVLARIREGEGDSLWVA 127 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +L + + + +L ++D + R+DL W E RYL FL+GR K Sbjct: 128 LLGSSDGVAIGGDLAPLDCTHVDFSALHAAGRVDLAGWRRGDE--RYLGFLRGR--GKGG 183 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F LG S+ + A + + L+ +D F +L A R V ++ + Y + +AG Sbjct: 184 AWFKRVLGCSDVMVALQETKKLVATLDRFVDTERLAPATRDTVLERAHDYLDTLGEAGAP 243 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD-A 298 + + L++E+ + ++ F +R +R L +F+ S + F+ + Sbjct: 244 VVFEELAREVFPEQPERLDALLRAEETKIAPGFVPNRRAIRPLVRFSASAENWKLEFERS 303 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 L + +D ATDTL + G P L+ L+ G Sbjct: 304 GLHSGAVHYDRATDTLVLSGVPDYLKRMLEEDAKG 338 >UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reinekea blandensis MED297 RepID=A4BKP6_9GAMM Length = 334 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 76/332 (22%), Positives = 147/332 (44%), Gaps = 11/332 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEES 61 + + +HQLI R+ L LRD L + + ++ + Y+ +K YG F+EE+ Sbjct: 1 MSLKHAIVHQLI-RNTTTTALNLRDDELTVDDQLTHLMTQTKTAFYNRSSKQYGQFAEEA 59 Query: 62 ELAQTLRLQRQ-GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + L Q Q G F + +L+ ++ + G F H + E L Sbjct: 60 GTFKALAQQWQAGSVSFTTLTEQLMKQLQLDVEQQELDIDGHWFFAHETLESSENLWFFH 119 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L + + + + +D++ +D +DLT N + +YLT G R + Sbjct: 120 LKHKDGLMLTQAMDLSGARLIDFAKLGFGGYVDLTAMAANEQ--KYLTVSFGFGDRSLQS 177 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 ++F+ + +N L+ V ++ L + + N R++ YC EQ + GE + Sbjct: 178 ALLNFVNFVDTINTAVDTERFLEIVKAYSE--TLPQEKGSNYRKKAVEYCTEQDKLGETV 235 Query: 241 ---ELKSLSKELAGV-SEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINF 296 E+ + K+ G + + E + F +R++L++ ++ G ++I+F Sbjct: 236 VADEIAVVLKDEVGTDGPQTLASYMEVTQPEAKREFIPNRASLKKFQRYTGKTKEVSISF 295 Query: 297 DAMLLGERIFWDPATDTLTIKGTPPNLRDQLQ 328 +LG+ + +DPA+++LTI P NL QL+ Sbjct: 296 SNEILGKNVNFDPASESLTITNLPSNLLKQLK 327 >UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E894_GEOLS Length = 371 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 76/357 (21%), Positives = 159/357 (44%), Gaps = 35/357 (9%) Query: 5 INQIALHQLIKRDEQNLELV-LRDSLLEPTETVV-EMVAELHRVYSAKNKA--YGLFSE- 59 IN++ +H+L+K Q ++ LR ++L+PT +V ++V + +Y +N + YG F Sbjct: 6 INKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTFRTG 65 Query: 60 ------ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 + + F+A +R A L + + GG++LF Y Sbjct: 66 DGSGAFPGSFSTYTESATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSSAQS 125 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARID---LTEWETNPESTR----Y 166 + ++A++ +R++E L+ LD+N AR++ L+ + PE+ R Y Sbjct: 126 RFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQAARVNFGKLSAYLAAPEADRQELSY 185 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQV 226 L+F+ G+ A +F+ LG + G + L++ F R+ + + Sbjct: 186 LSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKRFKDNL 245 Query: 227 YSYCNEQLQAGEEIELKSLSK---------ELAGVSEVS---FTEFAAEKGYELEESFPA 274 +Y + + + GE ++L + + E V E++ + +E+ + + FP Sbjct: 246 LAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEE-HAVPVEFPV 304 Query: 275 DRSTLRQLTKFAGSGGGLTINFDAMLLG----ERIFWDPATDTLTIKGTPPNLRDQL 327 +++ L++ T S + F+ LG +I++D + +TIK P +L +++ Sbjct: 305 NKAALKKHTHIIYSADNWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKI 361 >UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SLQ5_ACIJU Length = 361 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/360 (21%), Positives = 157/360 (43%), Gaps = 34/360 (9%) Query: 1 MSLDINQIALHQLIK-RDEQNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFS 58 MS I +H + K ++ N + RD+ + + +V+ ++L YS +G Sbjct: 1 MSFQILNTVIHAVKKEKNSTNATPIYRDNCINNNDPLIVDFTSKLLSAYSNAANTWGDIR 60 Query: 59 E------ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E +L + + Q F FS ++ + + A GG+VL HY A Sbjct: 61 EAEDNIFHQDLIKWYTPEEQLYYSFYDFSTDVVDQITLAIKEKNTATGGYVLMIHYEQAA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET---------NPES 163 VE+L+V +L + +++ L++ + +++ R++L W+ NPE Sbjct: 121 VEFLMVVMLKLETRFGIDDALNMFKSETFSMDNFHESVRMNLKTWQNRSNSVGEDGNPE- 179 Query: 164 TRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE----- 218 R F+K + +V +F LG + A L++A +D+ A + + E Sbjct: 180 -RCFAFVKKKNEDEVTRYFRTALGCENYAESAANTNHLIKATEDYVATLKFNCEEEAIAA 238 Query: 219 RQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE--------VSFTEFAAEKGYELEE 270 ++ R +++ +L+ E + LK ++ EL + + F + EK Y ++E Sbjct: 239 KREKRDKLHELLAVKLKNKEPVSLKWVANELFPTPDFDIENNELLKFIKNNQEK-YPIDE 297 Query: 271 SFPADRSTLRQLTKFAGS-GGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 +F + + L + G+ G T+NF L + +F++ + LT+KG + +Q+ R Sbjct: 298 TFKPYKPRVNALGRVRGTLAGDTTVNFPVSELNKTVFYNIQSRELTLKGVDGKMHEQIMR 357 >UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBF6_HAHCH Length = 346 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 7/294 (2%) Query: 43 LHRVYSAKN-KAYG---LFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFA 98 L R+++AK KA+G L +E L+ +G+ F + +++L P Sbjct: 42 LRRLFAAKTGKAFGRINLHAEGQSFGPWLKDWYEGKMSFQQLTEKGLAEFKEKLDVIPLT 101 Query: 99 DGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE 158 ++L+ H + L + VL + + V L I P +LD RI+L Sbjct: 102 TQSYLLWIHDQQGDARTLYIFVLESSVTNVVTNELQIEPIEHLDPQAITFALRIELDPLF 161 Query: 159 TNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE 218 + + +L+ R RK+ + G + ++ + +L ++ F AE+ LD Sbjct: 162 ASNQPDCASVYLQ-RNLRKIGEAGCHSFGFATHVDTVKETEVVLSGLERF-AES-LDPKS 218 Query: 219 RQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRST 278 ++++ +C++Q + GE ++++ LS + + F F E E + D Sbjct: 219 AAKLKKKAVEFCSDQEKLGEAVQIEELSIAIDEQNPDKFAHFMREAIPEAPAALRPDSRK 278 Query: 279 LRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 L+QL +FAG G G++++F + + E I +D D L I P +L+ QL+R S Sbjct: 279 LKQLVRFAGRGSGMSLSFSSEAINESIIYDSEKDALIIMEIPKSLKAQLKRYLS 332 >UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacter RepID=B7I7X8_ACIB5 Length = 348 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 9/264 (3%) Query: 76 DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDI 135 DF+ +R + L + GGF++F ++ L VAV++ ++ +N +L+ Sbjct: 87 DFVEMTRELAEYFKTFLVENKSITGGFLVFFEFKGDEHTKLAVAVINKSNATDINPDLNF 146 Query: 136 NPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGAS-EGLNA 194 LD++ + A I++TEW + S RY+ F G+ +V D+F F+G + A Sbjct: 147 IAKEILDLDKLHLGATINITEWR-DEFSERYIRFKNGQ-SEQVTDYFQKFIGCEVDKQAA 204 Query: 195 KAQNRGLLQAVDDFTAEA-QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVS 253 + + L +A++ F E +L + + +SY N+ + G+++ L +++K + Sbjct: 205 NEETKKLKEAIESFATEKLKLPQTAADDYLALAHSYINDCITKGDDVVLSNVAKHVFPAD 264 Query: 254 EVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDT 313 F E+A+E G+ L ++ L+ KF+ S L+I F LL ++I ++ D Sbjct: 265 SDEFFEYASE-GHNLSGILQISKTELKGFKKFSSSRKDLSITFAKALLNDKIKFE--NDI 321 Query: 314 LTIKGT--PPNLRDQLQRRTSGGN 335 L I + +L +L+ T+ N Sbjct: 322 LKIDSSLLSDSLVAELKAATTASN 345 >UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSV2_MARMS Length = 349 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%) Query: 100 GGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWE 158 GG+++F Y E+L V +L+ + VN +L++ P+ LD+ + A I+LT+W Sbjct: 117 GGYLVFYQYTARGQEWLAVVILNKTEGIDVNSTSLEVVPSEILDLKTLHLAASINLTKWM 176 Query: 159 TNPESTRYLTFLKGRVGRKVADFFMDFLGAS-EGLNAKAQNRGLLQAVDDFTAEAQLDKA 217 + TRY+ F GR ++ D+F F+G + A + L AV +F E+ ++ Sbjct: 177 LG-DDTRYIRFKTGRAA-QIRDYFEKFIGCQRDKYAAVVETHQLKAAVQNFAKESGYNEE 234 Query: 218 ERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRS 277 + N + + + E+ + E + LK+L+ + F E A Y L E D++ Sbjct: 235 KVSNKVDKTHQFIIERQKDQEPVLLKALANAVFPDLSEEF-EREARDTYNLSEEISIDKN 293 Query: 278 TLRQLTKFAGSGGGLTINFDAMLLGERIF 306 L++ K +++F+ L+G++IF Sbjct: 294 ELKKYVKIFVQSKAFSMSFERDLVGKQIF 322 >UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis HI4320 RepID=B4F2P1_PROMH Length = 364 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 23/204 (11%) Query: 98 ADGGFVLFCHYR----------YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHAD 147 ++G ++F HY+ + E LLV +L N ++R ENL +NP +D++ Sbjct: 105 SNGAILVFTHYQLQHEKEDGSVHKDFERLLVLMLKNTDALRFKENLQLNPVDVIDLDKFL 164 Query: 148 IVARIDLTEW---ETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQA 204 AR+D+T + E E L F++G V +F + +GA + ++ K + ++A Sbjct: 165 QGARVDITRFMSEEVEDEDKNNLCFIRG--TGDVRKYFTESIGAEDIISNKTSSEQCIKA 222 Query: 205 VDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV-------SF 257 ++ F+ + + +A R+ + ++ N + G+ I L+ + ++ + V +F Sbjct: 223 LEQFSHQKEFGRALREKIESKIQELFN-NCKRGQSITLEKIQTQIDAIIPVDLAEHKNTF 281 Query: 258 TEFAAEKGYELEESFPADRSTLRQ 281 +F E G+E+ E F S RQ Sbjct: 282 VDFVNENGFEVNEEFEVSASDKRQ 305 >UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B175_9ENTR Length = 51 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 38/50 (76%), Positives = 42/50 (84%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK 50 MSLDI+Q+ LHQLIKRDEQ LE+VLRDSLLE V EM+ ELHRVYSAK Sbjct: 1 MSLDISQLVLHQLIKRDEQTLEVVLRDSLLEIEPVVQEMIEELHRVYSAK 50 >UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TLD4_RICCO Length = 177 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 11/149 (7%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEESE 62 +I + +H+ K +V R L++ T+ V +V LH +Y K K YG F ++ + Sbjct: 26 EIRGLVVHKFEKVAHGQGVIVPRHDLVKVTDPVQRLVDALHTLYGEKTGKGYGKFEDDED 85 Query: 63 LAQTLRLQRQ-------GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 T +QR+ +DFL FS AA L+ + P A GG+VL H A ++ Sbjct: 86 ---TFPMQRRVRAYFVDATDDFLTFSHAAMKILKGKADDVPLATGGYVLIAHIHNGARDF 142 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDIN 144 LL A++++ + + L+I ++D+N Sbjct: 143 LLFAIVTDTVGSAITDKLEIEDRAHVDLN 171 >UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RPK1_XANCB Length = 393 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 28/268 (10%) Query: 77 FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDIN 136 F+ + A L K + GG+V F Y A +LLVA++ ++ + ++D+ Sbjct: 115 FMTLTEVAMAELVAAAGKELLSTGGYVFFMVYEVNATPFLLVAMIKERGALSL--SVDMV 172 Query: 137 PT--HYLDINHADIVARIDLTEWE-----------TNPESTRYLTFLKGRVGRKVADFFM 183 PT LD++ ARI+LT +E + E YL F+ +VA +F+ Sbjct: 173 PTDIQELDLSKLHQAARINLTRYEQALNVGSADVDADEEERTYLCFVNKGARNEVAKYFI 232 Query: 184 DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELK 243 D LG +G+++ + + AV F + + K + + VR+ V + L G I + Sbjct: 233 DALGCEKGVSSNRATKSAIDAVRKFVSSKKEIKPQARKVRRAVIDHM-AALPQGAVITVG 291 Query: 244 S--------LSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTIN 295 + L EL E +E+ + ++ ESF L+ +T+ G ++ Sbjct: 292 TLVAVVRVALGDELVEHVE-GLSEYLNGEEAQVPESFVVSAQYLKSVTRITAQAEGWRLS 350 Query: 296 FDAMLLGER---IFWDPATDTLTIKGTP 320 F+ + E + ++ A +L I+ P Sbjct: 351 FEDTEISETEGPLIYNRADKSLRIRRLP 378 >UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN26_9GAMM Length = 355 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/353 (20%), Positives = 150/353 (42%), Gaps = 32/353 (9%) Query: 3 LDINQIALHQLIKRDEQ-NLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNK-AYGLFSE 59 + + +A+ +L+K E + R ++ +E + + E L+ +S ++ +G F+ Sbjct: 1 MQLKHLAIRELVKESEDAPARITERGGIIPTSEPIANQLFETLNAAFSRRSSLTHGSFNH 60 Query: 60 ESELA-------QTLRLQRQGEEDFLAFSRAATGRLRDEL--AKYPFADGGFVLFCHYRY 110 ++E +T E DF A + + +L + A GG+VLF Y Sbjct: 61 DNEEGYPFISAFETFVGSEASETDFTALTDKSMAQLAVAINNPSAHTAHGGYVLFALYAS 120 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIV--ARIDLTEWETNPESTRYLT 168 EYLL+A++ + + + + D++PT +++N + ARI+++ ++ +S YL+ Sbjct: 121 DRYEYLLIALVRDKAGIGFDN--DLHPTEIMEVNLDQLHQGARINISTFKKKQDS--YLS 176 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 F+ + ++ +F G ++ ++ L++A DF + + ++ V + V S Sbjct: 177 FIGSKEKGEITHYFSTAFGCTDVTPSRQSTGELIRAARDFCNQNNMSD-RKEEVVEDVVS 235 Query: 229 YCNEQLQAGEEIELKS--------LSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLR 280 Y Q E L + E A +F FA + Y + + F ST+ Sbjct: 236 YLERQRSDKESANLNEVQNLFDAYIPPEQAETIAGTFGTFANKGPYNVSQEFQPHTSTIN 295 Query: 281 QLTKFAGSGGGLTINFDAMLLGE-----RIFWDPATDTLTIKGTPPNLRDQLQ 328 + K ++F LG+ I +D + I P + +Q++ Sbjct: 296 RFAKLKVKADNWCLDFTKRNLGDINTGKDIEFDEDNGRIIINKLPSKVINQIR 348 >UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 3 str. JL03 RepID=B0BPC6_ACTPJ Length = 363 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/333 (22%), Positives = 139/333 (41%), Gaps = 29/333 (8%) Query: 1 MSLDINQIALHQLIKRDEQ---NLELVLRDSLLEPTETVVEMV--AELHRVYSAKNKA-- 53 M++ I +HQ+ K+ N L L+ +L + V AE S KN + Sbjct: 1 MTIQIKAGIIHQIKKQKNSPSANAVLHLQKTLHSTNNHLSTFVGYAEQQLQKSGKNNSIS 60 Query: 54 --YGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 +G+ + S++ + +Q + D+L S+ L + + G +V YR Sbjct: 61 GGFGIQNTLSKVLASSYFNQQAQIDYLQISKDLAQGLYHFVTQKTATTGEYVPMVFYRKE 120 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW--------ETNPES 163 V+YLL++++S + ++ + + T +D + + +I+LTE + PE Sbjct: 121 EVDYLLISLISLNKYINIDAQGEFSDTSVIDNDALKVGIKINLTEMAAHYAMPNDEQPEV 180 Query: 164 TRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 Y+ +++ R K+ D+ DF+ E ++ LL+ + ++ A D R V Sbjct: 181 C-YIQWIQ-RGSSKLPDYIQDFIPVGERIDNSKTTTALLKNIKNYVATTFADPKIRHKVE 238 Query: 224 QQVYSYC------NEQLQAGEEIE--LKSLSKELAGVSEVSFTEFAAEKGYELEESFPAD 275 V + E + E+I+ L S + F ++ + L+ SF D Sbjct: 239 TDVVTLLRTKSDNREAVHIEEDIDVLLNSALTTYGLTDKPQFAQYRQDNNIVLDSSFNVD 298 Query: 276 RSTLRQLTKF--AGSGGGLTINFDAMLLGERIF 306 + L+ KF + + G+ I D LGE IF Sbjct: 299 ANKLKPYEKFDLSLANKGILIKGDMGQLGESIF 331 >UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7NA37_ECOLU Length = 391 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 26/274 (9%) Query: 33 TETVVEMVAELHRVYSAKNKAYGLFSEE---SELAQTLRLQRQGEEDFLAFSRAATGRLR 89 E E + + + +S KNK + + S + L+ +F+ SRA +L+ Sbjct: 66 NEVTSEFITRIEKKFSRKNKFHNFLDSDHNPSSIPTILKKYINKNNEFIDLSRAIIEKLK 125 Query: 90 ---DELAKYPFADGGFVLFCHYRYLAVEYL--LVAVLSNLSSMRVNENLDINPTHYLDIN 144 + ++ GG V+F HY+ E L L+ V+ + S ++ + PT IN Sbjct: 126 HNANNESRVAQLQGGSVVFIHYKSTEPEDLGKLLIVMVDKQSAYDFDSDKLTPTRLNPIN 185 Query: 145 HADI--VARIDLTEWETN-PEST--RYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNR 199 + A DLT +E + PE+ Y+ FL+G+ +DFF D LG + K + Sbjct: 186 TDALRQAAMFDLTLFEASYPENKGDSYVHFLQGKSK---SDFFKDSLGCRHDSDNKRSIQ 242 Query: 200 GLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ---AGEEIELKSLSKELAGV---- 252 L A+D F ++ L + R + +V S ++ + + ++++ +SK + Sbjct: 243 QLFSAIDIFASKNSLGRVLRDTIDNEVKSLLEKKSKDKHGNKSVKIEDISKIIDSCLTDS 302 Query: 253 --SEVSFTEFAAEKGYELEESF-PADRSTLRQLT 283 + +F +F G++++ F P ++ LT Sbjct: 303 HKCKGTFVDFVNLNGFQIDPQFEPTPKAAESALT 336 >UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12R01_SHEDO Length = 357 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 71/351 (20%), Positives = 153/351 (43%), Gaps = 43/351 (12%) Query: 5 INQIALHQLIKRDEQNL--ELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSEES 61 I + +H+L K + ++ EL+ D+ E ++++ +L ++ + +G F Sbjct: 4 IKRFVIHELFKDKKPDIAGELLNLDN-----EIILKLAKDLVKIKDGRTAVLWGQFKGSG 58 Query: 62 ELAQTLR-LQRQGEED-----FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 + L+ L + +ED L + G L +E+ + + GG++ F Y Sbjct: 59 DFPLKLKELDAELKEDERSVKLLELTEHTMGALYEEIV-HTNSKGGYICFIEYESFLDCR 117 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPE---STRYLTFLKG 172 L+ A+++N + +++ NL ++D++ I+++ + + + YL+F Sbjct: 118 LMAAMITNTAGVKLT-NLKPTKEVHVDLSKLHQAVDINVSGYSKSIKGDFKKNYLSF--- 173 Query: 173 RVGRKV-ADFFMDFLGASEGLN-AKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 +G+ D+F + + AKA N+ + + DF A+ +D +++ R Q+ Y Sbjct: 174 -IGKGTHTDYFTNAFDCINKITPAKAVNKAP-EVLKDFLAQFYVDNTTQKSARAQLVKYL 231 Query: 231 NE------QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTK 284 ++ L +EI + +L + SF F+ + YE+ +F A +S + +L K Sbjct: 232 SDNIGKEVHLAKIDEIAVSNLPASCTDEEKQSFIAFSKQDKYEMPATFEARKSNVEKLAK 291 Query: 285 FAGSGGGLTINFDAMLLG---------ERIFWDPATDTLTIKG--TPPNLR 324 + NFD +G + I ++ D + I+G P +R Sbjct: 292 IYYATDAFNFNFDLENIGLVGVEADSNKPILFNKDNDDVIIRGRMITPEVR 342 >UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K6S1_PSEF5 Length = 376 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/291 (17%), Positives = 116/291 (39%), Gaps = 40/291 (13%) Query: 74 EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENL 133 E +F+ + A +L ++ A GG +L Y A ++ LVA + ++++EN Sbjct: 84 EAEFIELTHLAMDQLVEQARDQTLATGGHILCAQYTSGASDFFLVASIKQRGGIQLDENY 143 Query: 134 DINPTHYLDINHADIVARIDLTEWETNPES-------------------TRYLTFLKGRV 174 +D+ ARI+ ++ + + + YL F+ Sbjct: 144 VPKAIQEVDLKTVQQAARINFVKFASVTAAACTAAGNTVVDAEDAEEVDSTYLCFISRGR 203 Query: 175 GRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQL 234 + +D+F+ LG ++G+ + + + V F + K ++ V Y ++L Sbjct: 204 DSQASDYFISALGCAKGVASGRATKNAIDYVGRFFRNNKELKPFAYKAKEAVVRYLQDRL 263 Query: 235 QAGEEIELKSLSK------------ELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQL 282 G+ L ++ E+AG+ ++ ++ + + E F + +L++ Sbjct: 264 ADGKSARLDAICHAAIQHVPPDLVDEIAGLK-----DYLNDEKHRVPEDFTVNAKSLKEK 318 Query: 283 TKFAGSGGGLTINFDAMLLGER----IFWDPATDTLTIKGTPPNLRDQLQR 329 T+ G ++ F+ LG+ +++D LT+ L D +++ Sbjct: 319 TRIKGEATSWSLQFERGALGKEATSDVYYDEGRKKLTLSNMNQELVDLIEK 369 >UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFU7_9SPHN Length = 140 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 13/140 (9%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFS- 58 M +I +A+H L R + + L LL+ T+T + +++ ++ +Y+++ +K++G F+ Sbjct: 1 MVTEIIALAIHDL-NRSDAGYSVALSKKLLDVTDTTLRVISTVYELYNSRTSKSHGRFTT 59 Query: 59 -EESELAQTLRLQRQGEE-DFLAFSRAATGRLRDELA----KYPFADGGFVLFCHYRYLA 112 E S +R + +E DFL TG++ D LA K + GG V F H+R Sbjct: 60 AEGSPTEGQIRAYVEAKEKDFLGL----TGKMMDNLAREAGKKSASVGGHVFFAHFRRDG 115 Query: 113 VEYLLVAVLSNLSSMRVNEN 132 +++LV V+++ S + +N Sbjct: 116 SDFMLVTVVTDKLSAALTKN 135 >UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S2L9_ALTMD Length = 365 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%) Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-ETNPESTRY-LTFL 170 VE LLV +L + S++R N++ T+ +D A I++ E+ E+ E ++F+ Sbjct: 129 VENLLVVLLKDKSALRFNDDGAPRGTNIIDFEDVMQGAIINIGEFVESISEKKDIDVSFI 188 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVY--- 227 G G ++F+DF A + ++ A++ F +LD+ +R+ +V Sbjct: 189 NGSGG--TTNYFVDFFDADNLIKNNESVTNVIDALNKFLEHKKLDRTQREECISKVVGRI 246 Query: 228 SYCNEQLQAGEEIELKSL------SKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ 281 Y Q A + EL ++ +E +S SF +F E Y++ E F +S + Sbjct: 247 DYNERQSFATKVHELSAVIYSTLRKEENIEISSSSFEDFIHEYNYKVNEEFKVTKSDRDK 306 Query: 282 LT 283 L Sbjct: 307 LV 308 >UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48MF5_PSE14 Length = 204 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 3 LDINQIALHQLIKRDEQNLELVL--RDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 + I +H LI + VL RDS L ++ + M+A+L+ Y+AK KA+GLF Sbjct: 84 MPIRHCIVH-LIDKKPDGTPAVLHARDSELAESQAIENMLADLNESYNAKQGKAWGLFHP 142 Query: 60 ES---ELAQTLRLQRQGEEDFLAFSRAATGRLR 89 ES + L+ G DF AFSR A L+ Sbjct: 143 ESGAHPFSGWLKEYLDGGNDFTAFSRTAVEHLQ 175 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacter... 405 e-111 UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewan... 384 e-105 UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewan... 382 e-105 UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root R... 381 e-104 UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gamma... 373 e-102 UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alterom... 371 e-101 UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammap... 354 3e-96 UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Altero... 345 2e-93 UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteob... 336 8e-91 UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 ... 328 1e-88 UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina R... 327 4e-88 UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauer... 306 9e-82 UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcu... 305 2e-81 UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pse... 301 2e-80 UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Ta... 299 7e-80 UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1... 299 1e-79 UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9... 295 2e-78 UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marino... 292 1e-77 UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Morit... 289 7e-77 UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine ... 288 1e-76 UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriav... 287 3e-76 UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccha... 286 7e-76 UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marino... 285 1e-75 UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 T... 285 1e-75 UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2... 278 2e-73 UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reineke... 271 2e-71 UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobact... 264 2e-69 UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocy... 262 1e-68 UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=... 261 2e-68 UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chej... 258 2e-67 UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudom... 254 2e-66 UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH... 251 3e-65 UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuni... 247 5e-64 UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudom... 239 8e-62 UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. ... 233 7e-60 UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinom... 224 3e-57 UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacte... 207 6e-52 UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinob... 203 6e-51 UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax... 197 5e-49 UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escheri... 165 2e-39 UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis... 162 1e-38 UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 ... 142 2e-32 UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingo... 101 3e-20 UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus... 59 2e-07 Sequences not found previously or not previously below threshold: UniRef50_B2Q671 Putative uncharacterized protein n=2 Tax=Provide... 147 7e-34 UniRef50_C2HRJ2 Putative uncharacterized protein n=1 Tax=Vibrio ... 117 4e-25 UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syr... 91 7e-17 UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alterom... 90 1e-16 UniRef50_A6N5K4 Putative uncharacterized protein n=1 Tax=Pseudom... 84 5e-15 UniRef50_Q72ZR6 Putative uncharacterized protein n=1 Tax=Bacillu... 74 7e-12 UniRef50_C9KKJ2 Putative uncharacterized protein n=1 Tax=Mitsuok... 72 4e-11 UniRef50_A6TSZ2 Putative uncharacterized protein n=2 Tax=Alkalip... 71 5e-11 UniRef50_C0ESI1 Putative uncharacterized protein n=1 Tax=Eubacte... 71 6e-11 UniRef50_D1PP03 Putative uncharacterized protein n=1 Tax=Subdoli... 65 3e-09 UniRef50_A5CM71 Putative uncharacterized protein n=1 Tax=Claviba... 64 6e-09 UniRef50_C7N1T8 Putative uncharacterized protein n=2 Tax=Corioba... 60 9e-08 UniRef50_A3DC72 Putative uncharacterized protein n=3 Tax=Clostri... 60 1e-07 UniRef50_A4E7M9 Putative uncharacterized protein n=3 Tax=Collins... 60 2e-07 UniRef50_Q210V3 Putative uncharacterized protein n=1 Tax=Rhodops... 59 3e-07 UniRef50_B4S2T2 Putative uncharacterized protein n=1 Tax=Alterom... 58 5e-07 UniRef50_C9LWV7 Putative uncharacterized protein n=1 Tax=Selenom... 56 2e-06 UniRef50_B9CNT1 Putative uncharacterized protein n=1 Tax=Atopobi... 56 2e-06 UniRef50_A8SBG1 Putative uncharacterized protein n=2 Tax=Faecali... 56 3e-06 UniRef50_D0KGW1 Putative uncharacterized protein n=1 Tax=Pectoba... 55 3e-06 UniRef50_C9L8B0 Putative uncharacterized protein n=2 Tax=Clostri... 55 4e-06 UniRef50_C1HX40 Predicted protein n=15 Tax=Neisseria gonorrhoeae... 55 4e-06 UniRef50_C1D8S7 Putative uncharacterized protein n=3 Tax=Neisser... 55 6e-06 UniRef50_A1ZY92 Putative uncharacterized protein n=1 Tax=Microsc... 52 3e-05 UniRef50_C6X274 Putative uncharacterized protein n=2 Tax=Flavoba... 52 4e-05 UniRef50_B8I0U2 Putative uncharacterized protein n=2 Tax=Clostri... 51 8e-05 UniRef50_Q18AC3 Phage protein n=12 Tax=root RepID=Q18AC3_CLOD6 51 8e-05 UniRef50_UPI000169395D hypothetical protein Plarl_13324 n=1 Tax=... 50 1e-04 UniRef50_Q3XXH4 Putative uncharacterized protein n=1 Tax=Enteroc... 50 1e-04 UniRef50_B1R015 Putative uncharacterized protein n=2 Tax=Clostri... 49 2e-04 UniRef50_C4VH46 Fkbp-type peptidyl-prolyl cis-trans isomerase n=... 49 2e-04 UniRef50_C8W7R3 Putative uncharacterized protein n=1 Tax=Atopobi... 49 3e-04 UniRef50_A3WXK2 Putative uncharacterized protein n=1 Tax=Nitroba... 48 3e-04 UniRef50_UPI0001972DB1 hypothetical protein ClM62_13142 n=1 Tax=... 47 7e-04 UniRef50_A8RDZ2 Putative uncharacterized protein n=1 Tax=Eubacte... 47 7e-04 UniRef50_B1BR40 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.003 UniRef50_A4BWJ4 Putative uncharacterized protein n=3 Tax=Flavoba... 45 0.003 UniRef50_B2TNZ2 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.003 UniRef50_D2BRL6 Putative uncharacterized protein n=1 Tax=Dickeya... 45 0.005 UniRef50_B5F983 Putative uncharacterized protein n=1 Tax=Salmone... 44 0.006 UniRef50_Q11XK8 Putative uncharacterized protein n=2 Tax=Cytopha... 44 0.007 UniRef50_C8NIQ7 Putative uncharacterized protein n=2 Tax=Granuli... 43 0.017 UniRef50_C7M8L8 Putative uncharacterized protein n=3 Tax=Flavoba... 43 0.019 UniRef50_A2CHE4 Putative isomerase (Fragment) n=1 Tax=Eubacteriu... 42 0.023 UniRef50_Q03L76 Uncharacterized conserved protein n=72 Tax=Strep... 41 0.046 >UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacteria RepID=NDPA_SERP5 Length = 336 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 266/335 (79%), Positives = 300/335 (89%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 MSLDI+QIALHQL+KRDEQ L++VLRDSLL V EM+ ELHRVYSAK+KAYGLF+E Sbjct: 1 MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEG 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 SELA LR R+ ++DFLAFSRAATGRLRDELAKYPFA+GG VLF YRYLAVEYLL+AV Sbjct: 61 SELADALRTCRKEDKDFLAFSRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAV 120 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L++ +S RVNE LDIN THYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV+D Sbjct: 121 LNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVSD 180 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 FFMDFL A+EGL+ KAQNRGLLQAVDD+ A+AQLDK ERQ+VRQQVYSYCNEQLQAGEEI Sbjct: 181 FFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI 240 Query: 241 ELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML 300 EL+ LSKE+A V E F +F++E+GY+LE+SFPADR TLRQLTKFAGSGGG+++NFDAML Sbjct: 241 ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAML 300 Query: 301 LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LGERIFWD ATDTLTI+GTPPNLRDQLQRR + GN Sbjct: 301 LGERIFWDAATDTLTIRGTPPNLRDQLQRRQNSGN 335 >UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewanella RepID=NDPA_SHEAM Length = 342 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 154/341 (45%), Positives = 224/341 (65%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSE 59 M++ + Q +H++ + E L LR L ++ V M+ ELH+ Y++K+ K +G F Sbjct: 1 MTIKVEQAIIHEIAQTHEGQLSCRLRPQPLLNSQAVELMLEELHQSYTSKSGKGFGFFGT 60 Query: 60 ESE-------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 A L+ G F+ F+ A+ L+DEL KY F+ GGF+L Y ++A Sbjct: 61 HGNDGEANPAFANCLKDYLDGGLGFVEFTGVASKLLQDELGKYDFSQGGFLLLACYSHMA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL VA+LS SSM V +++++ ++LD+N+ + ARIDLTEW+ + ES +Y++F++G Sbjct: 121 SDYLFVALLSAKSSMTVLDDMELTQVNHLDLNNIQLAARIDLTEWQADKESRKYISFIRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF A ++L K ERQ R +V+ YC+E Sbjct: 181 RAGRKVADFFLDFMGCVEGINPKAQNKSLMIAVEDFVAGSELTKDERQACRDKVFEYCSE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + AG E+++K L+ ELA SF +FA Y+LEE FP D+STLRQL KF+G+GGG+ Sbjct: 241 RFDAGAEVDIKDLADELADSGMDSFYDFATTGNYDLEEEFPVDKSTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 TI+FD LGER+ +DP +DTL IKG P NL+DQL RR G Sbjct: 301 TISFDGHHLGERVIYDPISDTLLIKGVPANLKDQLHRRLKG 341 >UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewanella RepID=B0TK49_SHEHH Length = 342 Score = 382 bits (982), Expect = e-105, Method: Composition-based stats. Identities = 151/341 (44%), Positives = 219/341 (64%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MS+++ Q +H + + E L LR L ++ V M+ ELH+ Y+ K K +G F Sbjct: 1 MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGI 60 Query: 60 ESE-------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E L R GE F+ FS A L++EL+KY F+ GGF+L Y Y+ Sbjct: 61 SGEDGEANTKFEDALTTYRSGELGFVEFSGIAGKLLQEELSKYDFSTGGFLLLSCYTYMT 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL V++L+ SSM V ++++++ +LD+N+ + ARIDLTEW+ +P+S +Y++F++G Sbjct: 121 SDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARIDLTEWQADPDSKKYISFVRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF ++L K ERQ R++V+ YC E Sbjct: 181 RAGRKVADFFLDFMGCVEGVNIKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + G I++K L+ ELA SF +FA YELEE FP D+ TLRQL KF+G+GGG+ Sbjct: 241 RCDEGASIQIKDLADELADQGVDSFYDFAQGGDYELEEEFPGDKPTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 T++FD LGER+ +DP +DT+ IKG P NL+DQL RR G Sbjct: 301 TLSFDGQHLGERVIYDPVSDTIIIKGVPANLKDQLDRRLKG 341 >UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root RepID=NDPA_PSEA7 Length = 340 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 192/334 (57%), Gaps = 4/334 (1%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + I +H + K+ + L RD+ L ++ + ++A+L+ Y+AKNKA+G F ES Sbjct: 1 MPIKHAIVHLIEKKPDGTPAMLHARDAELGDSQAIENLLADLNESYNAKNKAWGFFQGES 60 Query: 62 ---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + L +G+ DF+ FSR A L+ + + + GG +LF HY+ +YL + Sbjct: 61 GAYPFSGWLGDYLEGDRDFVGFSREAVEHLQKLMEESNLSTGGHILFAHYQQGMTDYLAI 120 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV 178 A+L + + VNE+L++ P+ +LD+ + ARI+++EW N +S +Y++F+KG+ G+KV Sbjct: 121 ALLHHSEGVAVNESLEVTPSRHLDLAQLHLAARINISEWRNNKQSKQYISFIKGKGGKKV 180 Query: 179 ADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGE 238 +D+F DF+G EG+++ ++ R LL+A DF + + + + + + Y Q + GE Sbjct: 181 SDYFRDFIGCQEGVDSPSETRTLLKAFSDFVESEDMAEEQAREKTETLVDYATSQARIGE 240 Query: 239 EIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + L +LS+ + +F ++ K Y L PAD+ TL Q +F G GL+I+F+A Sbjct: 241 PMTLDALSELMDDQQPRAFYDYIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 LLG RI +D DTL I P LRDQL+RR + Sbjct: 301 HLLGSRIEYDEERDTLRISSLPTQLRDQLKRRKA 334 >UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gammaproteobacteria RepID=NDPA_ALISL Length = 338 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 244/336 (72%), Gaps = 2/336 (0%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MSL ++ + LH+L+K ++ LE+ LR+ LLE E +V+ELHRV+++K K +G+F Sbjct: 1 MSLILSNVILHKLVKNEQDELEVCLRNQLLENEEFTEALVSELHRVFNSKAGKGFGIFKT 60 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 ESE L R+ E FL FS + +L+ EL KYPFA+ G ++ Y+ LA EYL VA Sbjct: 61 ESEFGHWLGSVRKNETPFLEFSNKSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 VL + SM+V + L+I+ T YLDI DI ARIDL+ WET+ +S RYLTF+KGRVGRKV+ Sbjct: 121 VLPSNESMKVTDELNISATDYLDIAKMDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVS 180 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 DFF+DFL A G++ K QN+ L+QAV+DF A+ +L+K E+Q R+QVY YCN QLQAGEE Sbjct: 181 DFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLEKEEKQQYRKQVYDYCNGQLQAGEE 240 Query: 240 IELKSLSKELAGVSEVS-FTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + +K LS EL S F +FA E+GYELEESFP DR+ LR+LTKF G+GGGL++NFDA Sbjct: 241 LTVKELSGELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG 334 MLLGER+F+DP TDTLTIKGTPPNL+DQL RR Sbjct: 301 MLLGERVFYDPETDTLTIKGTPPNLKDQLTRRLGSS 336 >UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alteromonadales RepID=A0Y6R2_9GAMM Length = 338 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 133/332 (40%), Positives = 218/332 (65%), Gaps = 4/332 (1%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 M+ D+ ++ +H + K+D+ ++ LR+ + + V + +LH ++ K K Y FS Sbjct: 1 MTTDVKKLVVHYVDKKDDDT-QIHLRNDEMIINDKVAVFIEQLHHAFTGKPGKGYCAFSG 59 Query: 60 E--SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 E S +A +++ R E F + A+ L++EL KY F + G+++FCHY+Y+A +Y+L Sbjct: 60 EKNSIVASSMQSYRNNELGFWHLTEQASTVLKEELDKYAFNETGYLVFCHYQYVATDYML 119 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +A+++ + LD+ + +LDI+ + ARIDLT W+T PE RY++F+KGR GRK Sbjct: 120 IAMINIKEHYSMTSELDLAASRHLDISRMQLAARIDLTAWDTQPEDNRYISFIKGRAGRK 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 VADFF+DFLG EG++ K Q++ +L AV+D+ +E Q DK+E+ ++R+QV+ YCN+ + G Sbjct: 180 VADFFLDFLGCEEGVDPKQQSQVMLNAVEDYLSEQQFDKSEKDDLRKQVFDYCNDCVTTG 239 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 EE + LS ++ + F F ++ Y+LEE+FP D+ T+ + KF+G GGG++++F+ Sbjct: 240 EEASVTELSAAISKGDDSPFDSFCKDQSYDLEETFPVDKKTVTSMVKFSGLGGGVSVSFE 299 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQR 329 LGER+ ++ ATDTL IKG PPNL+DQLQR Sbjct: 300 RKHLGERVTYNEATDTLVIKGIPPNLKDQLQR 331 >UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammaproteobacteria RepID=NDPA_MANSM Length = 355 Score = 354 bits (908), Expect = 3e-96, Method: Composition-based stats. Identities = 170/355 (47%), Positives = 224/355 (63%), Gaps = 20/355 (5%) Query: 1 MSLDINQIALHQLIKRDEQNL--------------------ELVLRDSLLEPTETVVEMV 40 MS+ +NQI LHQ+IK N+ E VLR LL T + + Sbjct: 1 MSITVNQIVLHQIIKPASANIPANNNNETENGETATQNTQLETVLRQELLPITAEAEQFM 60 Query: 41 AELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADG 100 ELH+ Y K K YG+F E+S AQ+L + E DFL FS A L ELAKY FA+ Sbjct: 61 LELHQAYQNKTKGYGVFQEQSRFAQSLNRLLERETDFLPFSYEAAKLLSSELAKYAFAES 120 Query: 101 GFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN 160 G + C Y +LA +YL +A+L + +S+ V+E L+I+ T YL+IN DI ARI+LT+ N Sbjct: 121 GTFVLCRYNFLATDYLFIALLDSKASVLVDEKLEIHRTQYLNINQFDIAARINLTDLRVN 180 Query: 161 PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQ 220 S RYLTF+KGRVGRK+ DFFMDFLGA EGLN + QN+ LLQAV D+ + +L + Q Sbjct: 181 ANSNRYLTFIKGRVGRKIGDFFMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQ 240 Query: 221 NVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLR 280 V++QV+ YC Q+ AG+EIEL LS+ + +++ F +FAAE+ Y LE + P RS L+ Sbjct: 241 AVKKQVFDYCKGQINAGDEIELTELSETIPTLNQQPFADFAAEQDYGLENNIPPVRSALK 300 Query: 281 QLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LTKF+GSG G+TI+FDA LL +RI+WD DTLTI G P NL+DQLQR N Sbjct: 301 SLTKFSGSGKGVTISFDAELLDKRIYWDDMQDTLTIHGLPANLKDQLQRLLKNHN 355 >UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Alteromonadales RepID=A1SWZ3_PSYIN Length = 351 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 145/337 (43%), Positives = 221/337 (65%), Gaps = 8/337 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 M++ + I LH L E L+ +R+ L + ++ E + +LHR Y +K NKA+ F + Sbjct: 1 MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGD 60 Query: 60 ESELAQ----TLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 +++ + L + DF+ FS+ L +EL K+ FA+ G +L Y + A +Y Sbjct: 61 KTDKSPLFREALTDYMSQQLDFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDY 120 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 L +A+L N S+ VNENL++ + +++ + +VARIDLT +P+S RY++F+KGR G Sbjct: 121 LFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLTLLARDPQSNRYISFIKGRAG 180 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 RKV+DFF+DF+GA EG +AK QN+GL++AVD+F L A+++ VR+ + YCNEQL+ Sbjct: 181 RKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK 240 Query: 236 AGEEIELKSLSKELAGVSE--VSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 G++IEL LS++L + SF +F +E Y+LE SFP DRS +R+LTK+ G GGG++ Sbjct: 241 QGDDIELSVLSEQLQDSPKLEGSFYDFVSED-YQLENSFPVDRSVVRKLTKYVGQGGGIS 299 Query: 294 INFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 I+FD LGERIF+D +DTLTI+G PPNLR+QL+R Sbjct: 300 ISFDQKHLGERIFYDANSDTLTIQGIPPNLREQLKRD 336 >UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteobacteria RepID=B4RYJ6_ALTMD Length = 368 Score = 336 bits (861), Expect = 8e-91, Method: Composition-based stats. Identities = 132/366 (36%), Positives = 207/366 (56%), Gaps = 34/366 (9%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MS I+ +H+LI E+ +E + RD+ L T + + +++ ++AK K G F Sbjct: 1 MSALIHHFVVHRLIVNKEEKIEAIPRDNCLAVTPEIELLAHQINHSFNAKPGKGVGHFVS 60 Query: 60 E-----------------------SELAQTLRLQRQG--------EEDFLAFSRAATGRL 88 E +E A+ L+ + E+ F AFS +AT RL Sbjct: 61 EVTREAKIENEEGETTTEKSTENVAEFAEGLKQYLEVQKEAGDNVEDAFHAFSVSATQRL 120 Query: 89 RDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADI 148 LA+ + GF++FC Y YLA +YL++A+L+ S + V +LD++ +LD+ + Sbjct: 121 VRTLAETGTVETGFLIFCQYEYLATQYLMIALLNTRSHVEVTNSLDLSAREHLDLAKMQL 180 Query: 149 VARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDF 208 R DLT+W+ PE RY++F+KGR+GRKV+DFFM F+G E ++ K QN+ L+ +VD + Sbjct: 181 AVRFDLTQWDIQPEQQRYVSFIKGRMGRKVSDFFMQFVGCEELVDVKQQNKQLISSVDAY 240 Query: 209 TAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELA--GVSEVSFTEFAAEKGY 266 A LD E+ R++V SY E++ AGE + + L+ L + +F F Sbjct: 241 LASESLDPQEQHQHREEVKSYFKEKIDAGESLSVNELANRLPQNEETSSNFKAFTESLEV 300 Query: 267 ELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQ 326 LE D + L+QL KF G GGG++++F+ L+G+R+F+DPATDTLTI+G PPNL+DQ Sbjct: 301 PLENEIQPDPAALKQLAKFTGQGGGVSVSFERKLMGDRVFYDPATDTLTIRGIPPNLKDQ 360 Query: 327 LQRRTS 332 L R++S Sbjct: 361 LNRQSS 366 >UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481E3_COLP3 Length = 351 Score = 328 bits (842), Expect = 1e-88, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 200/346 (57%), Gaps = 14/346 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLR-----DSLLEPTETVVEMVAELHRVYSAKN-KAY 54 MSL IN IALH L K++E E+VLR + V V LH +Y+AK KAY Sbjct: 1 MSLIINNIALHFLSKKEETG-EVVLRLGPENAEFAQENAKVTNFVDGLHAIYNAKGSKAY 59 Query: 55 GLFS------EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY 108 G FS + + + +++F FS A L++E+ KY + G+ + CHY Sbjct: 60 GSFSSMPSEGDSARFVDLMESYLTEQQNFYDFSVQAGNVLKNEIEKYDIEETGYFVICHY 119 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 Y+ YL VAV+ V+ L+I+ +LD N + ARIDL +++ N + RY++ Sbjct: 120 EYMGGRYLFVAVIPVSEHYSVDGELNISAAQHLDTNKLQLAARIDLFDYKDNSQGNRYIS 179 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 F+KGR GRKV+DFF+DFLG EGLN+K Q + L+QAV+D+ + QLD AE+Q R+ + S Sbjct: 180 FVKGRAGRKVSDFFLDFLGCEEGLNSKEQTQTLVQAVEDYVSVNQLDPAEKQKTRKDLLS 239 Query: 229 YCNEQLQAGEEIELKSLSKELAGVS-EVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 YC EQ + +++ L+ + K + E F +F + Y +EESFP +++ + ++TK++G Sbjct: 240 YCKEQKASSQDVSLQEVGKVIESAGTEQDFYQFCQTQSYPIEESFPHEQAVVNKITKYSG 299 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 G G++++F+ GE + ++P D+L I PPNL++QL Sbjct: 300 YGNGISLSFERSHFGEDVVYNPHNDSLIIYKVPPNLKEQLMALLDS 345 >UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina RepID=Q5R0C1_IDILO Length = 347 Score = 327 bits (838), Expect = 4e-88, Method: Composition-based stats. Identities = 138/343 (40%), Positives = 210/343 (61%), Gaps = 14/343 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF-- 57 M L I + +HQ + D Q + L L S L + + +++ EL VY++K K Y F Sbjct: 1 MQLRIEESIIHQFYQNDGQ-VGLRLAPSALTEDDQLHDLLVELTDVYTSKPAKGYASFLK 59 Query: 58 ----SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 E + L G+ DF+ FS+ + L ++L Y + GF+L Y++++ Sbjct: 60 DEEEGEPGPFPEHLTSWYDGQLDFVEFSQQSAKLLLEQLQNYNLLEAGFLLVTRYQHIST 119 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 EYLLV L + +N L ++ + LDI + ARIDLTEW+T+PES RY++F+KGR Sbjct: 120 EYLLVCFLPVKEGVTINPELAVDRSSQLDITKVQLAARIDLTEWKTSPESERYISFIKGR 179 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 GRKV+DFF+DFLG +E LN+KA + L+ +V ++ +++L+ +RQ + + Y YC++Q Sbjct: 180 AGRKVSDFFLDFLGCTERLNSKAHTQQLVDSVQEYAKQSELETEQRQALNKAAYEYCDDQ 239 Query: 234 LQAGEEIELKSLSKELAGVSE-----VSFT-EFAAEKGYELEESFPADRSTLRQLTKFAG 287 + G+ +++K LS++ A SF+ +FA + EL + FPAD+STLR+L KF G Sbjct: 240 WKQGDTVKIKDLSEQFAEQYPVEKSFESFSKDFAEQNSRELVDDFPADKSTLRKLVKFQG 299 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 GGG+++ FD LGER+ +D ATDTLTI GTPPNLRDQL+R Sbjct: 300 QGGGVSVGFDHTALGERVHYDAATDTLTINGTPPNLRDQLRRY 342 >UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZLL6_THASP Length = 338 Score = 306 bits (783), Expect = 9e-82, Method: Composition-based stats. Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 10/335 (2%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEES-- 61 + + LH L++ LVLR++ + + L Y +++ K +G F E+ Sbjct: 8 VTHLILHALVREPGAPSRLVLREAPCALDAATLRLAERLCAQYESRSAKGFGRFEEDEER 67 Query: 62 -ELAQTLRLQRQGEE-DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 LA+ LR E DF A S R++ + +GG ++ R + L VA Sbjct: 68 FPLARWLREHLVDETLDFTALSCQLAERVQAIADEEELEEGGHLVLARIREGEGDSLWVA 127 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +L + + + +L ++D + R+DL W E RYL FL+GR Sbjct: 128 LLGSSDGVAIGGDLAPLDCTHVDFSALHAAGRVDLAGWRRGDE--RYLGFLRGRGKG--G 183 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F LG S+ + A + + L+ +D F +L A R V ++ + Y + +AG Sbjct: 184 AWFKRVLGCSDVMVALQETKKLVATLDRFVDTERLAPATRDTVLERAHDYLDTLGEAGAP 243 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA- 298 + + L++E+ + ++ F +R +R L +F+ S + F+ Sbjct: 244 VVFEELAREVFPEQPERLDALLRAEETKIAPGFVPNRRAIRPLVRFSASAENWKLEFERS 303 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 L + +D ATDTL + G P L+ L+ G Sbjct: 304 GLHSGAVHYDRATDTLVLSGVPDYLKRMLEEDAKG 338 >UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K1V2_AZOSB Length = 339 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 12/335 (3%) Query: 1 MSLD--INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLF 57 MS D I Q+ +H+L+K + +V RD L P + +V +L ++ ++ K +G F Sbjct: 1 MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTF 60 Query: 58 SEESELAQTLRLQRQ----GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 ++ E RL R+ E F+ + LR+ +GG L R AV Sbjct: 61 EDDEEEFPVARLLREFSGDDERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAV 120 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 ++L +A++ + V+++L+++ +LD++ VARIDLT W E R + FL GR Sbjct: 121 DWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDLTGWRRGDE--RCVAFLSGR 178 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 A F FLG + + A + R L+QA+ DF +LD R + ++ + Y ++ Sbjct: 179 G--PAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDL 236 Query: 234 LQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 +AG +EL +L+ EL + L +F +R L+ L + + S Sbjct: 237 GEAGAPVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWR 296 Query: 294 INFDA-MLLGERIFWDPATDTLTIKGTPPNLRDQL 327 + F+ L + +D +DTL + PP L+ L Sbjct: 297 VEFERAGLRSGAVSYDVVSDTLVLSNLPPYLKQML 331 >UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KBR4_PSEPF Length = 346 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 79/338 (23%), Positives = 158/338 (46%), Gaps = 11/338 (3%) Query: 3 LDINQIALHQLIKRDEQN----LELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFS 58 +DI + +H ++K E N + + R +L + + + ++ +Y+ + YG F Sbjct: 1 MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFG 60 Query: 59 EE--SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 + + D + FS A + + A + LF Y ++L Sbjct: 61 QGPAHPFPNIMLDYSSEGSDIIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWL 120 Query: 117 LVAVLSNLSSMRVNEN-LDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 L+A+L + ++E LD+N + DI+H ARID+ +W++N + YL+F+K R G Sbjct: 121 LIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIEKWQSNQQP--YLSFIKRRAG 178 Query: 176 R-KVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQL 234 ++ +F + +E +AK ++A++D+ D Q R ++Y++CNE+ Sbjct: 179 ESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERK 238 Query: 235 QAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTI 294 Q + L +LS + F ++ E YE+ E F + +T ++L + + G +++ Sbjct: 239 QEEAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISV 298 Query: 295 NFD-AMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRT 331 +FD L E +++D D++ IK P L +++ Sbjct: 299 SFDVNDLRTETVYYDSDADSIIIKRPPVELVRDMKKAL 336 >UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5W5_PELCD Length = 344 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 91/332 (27%), Positives = 165/332 (49%), Gaps = 10/332 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEES 61 ++I+ +H + K QN +L LR+ L + + E++ L ++Y+ K + YG+F +++ Sbjct: 12 VEIHNAIVHLVKKERHQNPDLRLREEPLPVDDKLSELITSLRKLYNEKTARGYGVFHQDT 71 Query: 62 ---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 L+ +L E DF+ FS A L ++ A GG++L Y ++L+V Sbjct: 72 INYPLSTSLNGHLNNEVDFVEFSHNAMRTLVAKVTGVQLATGGYILLASYNENNADFLIV 131 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK- 177 A + + + ++NL++ + ++D+ H +AR+++T W N E RYL+F K R G Sbjct: 132 ASIKHRPGLAFDQNLNLTGSVHIDLEHLHEMARVNVTSWLNNGE--RYLSFAKRRGGDDG 189 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 +D+F +F+G E N+ N+ L+AV F + LD R+ + V++Y +E+ A Sbjct: 190 FSDYFREFIGCEEFCNSTEMNKITLRAVKAFGDQRNLDAETRRQLHAAVFNYFDEKRLAK 249 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEK--GYELEESFPADRSTLRQLTKFAGSGGGLTIN 295 E + L +LS + +F F E Y L + F ++ + L F G + I Sbjct: 250 ETVSLAALSHRIDDEQPEAFLTFINENAEEYPLGDGFDPVKNIYKGLKTFVIKDGSVKIQ 309 Query: 296 FDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 F+ G R+ + A +L I+ P+ QL Sbjct: 310 FNQEDFGTRVILN-ADQSLLIRELNPDFIRQL 340 >UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PB69_CELJU Length = 342 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 12/341 (3%) Query: 3 LDINQIALHQLIK-RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEE 60 + + I H+L + R E + R LL + E+ L + K K+YG FS + Sbjct: 1 MALTAIIAHRLYRHRPEDTVTTQARADLLPMNGKLEELAYALKTQFIRKGGKSYGRFSSD 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 + A L+ RQG F +FS+ + L P F+ + A +YL Sbjct: 61 TGEFPFAAWLQDYRQGRLGFASFSQKNLQHFQQLLEAAPSLFDVFLFVIEEQIEAGQYLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + V+ + S + ++ +L + + YLD + ++ A+I+ +W+ S YLT ++ R + Sbjct: 121 LFVVEHESGLYLDADLQLTDSVYLDTANLNLAAKINCADWDAGN-SATYLTLMRSRSDKD 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 AD F G S+ + K + + L+ V++F LD+ + R +V YC EQ +AG Sbjct: 180 FADAFGALTGFSDKYDVKTETKEFLEVVENF--TQTLDEPVARLTRTRVADYCLEQNKAG 237 Query: 238 EEIELKSLSKELA----GVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 + + + L+ LA G +F F A + E++ F +R + +G L+ Sbjct: 238 KPVAINELAHTLATETKGYEPETFERFVATQKPEIKAEFIPHAGQVRSYVRLSGRTDSLS 297 Query: 294 INFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG 334 ++F + LG I +DP D L IK P L+ QL Sbjct: 298 MSFASDCLGRDIEYDPERDLLMIKSIPTALKKQLLAHLKQH 338 >UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9 Tax=Enterobacteriaceae RepID=Q6D0T8_ERWCT Length = 335 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 9/330 (2%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 ++++ + +H L K+ + L TE ++ ++ Y+ + K YG F + Sbjct: 5 AIEVKHVVVHILDKQQNGDASERLSPEEGMVTEASQRLINDICAKYAGRTGKGYGYFEGD 64 Query: 61 SELAQTLRL---QRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 ++ R+ +DF S L + + A GG+VLF H E+LL Sbjct: 65 TDNYPMERMAGDYLDDTDDFYRSSCRMMHHLTERSQRENMATGGYVLFAHIEIGNNEHLL 124 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +A++S V ++ +I + YLDI + RIDLT WE+ E RY++FLKG+ Sbjct: 125 IAIVSATIGSTVTDDFNIQDSTYLDIAKLRMAGRIDLTAWESGAE--RYISFLKGQG--N 180 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 V+++F FLG ++ L AK ++ L + F AE L+ AE+ + + + +AG Sbjct: 181 VSNYFKQFLGCNDVLIAKRESEKLRDTLTAFAAEKNLEGAEKDAFLKGAFEHLQALSKAG 240 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 E + L++ + + + A + L + F D +R L F G + FD Sbjct: 241 EPLSLETFVNAVWPHAPEELSSKLAAEELGLSDGFVPDGRVIRALVSFKGKSKYWELKFD 300 Query: 298 AM-LLGERIFWDPATDTLTIKGTPPNLRDQ 326 I +DP T+ +T++ P RD Sbjct: 301 REGTTSGDIDYDPETNIITLRNVPDEFRDM 330 >UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marinobacter RepID=A1U492_MARAV Length = 338 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 156/324 (48%), Gaps = 9/324 (2%) Query: 16 RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE---SELAQTLRLQR 71 + Q LV ++L EP + ++ R++++K K YG FS++ + L+ Sbjct: 15 QPGQPARLVAGEALQEPGGDYEALHKQMKRLFNSKPGKKYGRFSDDIGECPFSAWLKDYL 74 Query: 72 QGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNE 131 + ++ F A + G+ ++ L G ++ H E + + +L S+MR + Sbjct: 75 EDKQTFAAMTDRLFGQWQELLTGSQEEFDGHLMIVHDALADAEVVYLFILETDSAMRFDG 134 Query: 132 NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEG 191 + ++ T L ++ ++ RI+L +W S Y+T + GR + F+ + Sbjct: 135 SQKLDATDVLSLSRLNLAVRIELDDWRNANGSENYMTLIHGRGTGDPGELFIRLCAFTNS 194 Query: 192 LNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAG 251 ++ + + L AV+ F ++ + VR + Y +C +Q GE +E+++LS L Sbjct: 195 VDVEKETMTFLDAVEAFAKTSE--PEKAGEVRAKAYEFCKDQHALGEPVEIEALSNYLDE 252 Query: 252 VSEVSFTEFAAEKGYELEES--FPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDP 309 F EFA++ EL E+ D +++L + AGSGGG++++F + L+ + +++D Sbjct: 253 SQPQRFKEFASQNA-ELPETGVLHPDHRKVKKLVRIAGSGGGMSVSFSSDLVNQAVYYDR 311 Query: 310 ATDTLTIKGTPPNLRDQLQRRTSG 333 D LTI P LR+QLQR Sbjct: 312 DKDALTITRLPKALREQLQRYLEA 335 >UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Moritella sp. PE36 RepID=A6FIF0_9GAMM Length = 343 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 15/339 (4%) Query: 3 LDINQIALHQLIKRDEQN-LELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 ++I I +H++ K ++Q+ + RD + +L ++ G F Sbjct: 1 MNIENIIVHEVRKEEDQSVATIYARDEENTVDAHAQTLSTQLSGLFRKTGLLTGRFETPE 60 Query: 62 -------ELAQTLRLQRQGE--EDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 L + E+F+AFS AAT + +L + GG++ F HY Y Sbjct: 61 NPDDPQPHFVTLLETHFDEDSFENFVAFSDAATRYFKQKLDGTGASKGGYLWFNHYTYNE 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +L + +L + + ++ +L ++ LD++ + ARI+LT W + STRY+ F G Sbjct: 121 ENFLSIVLLRKKNGLALSNDLTLDQIEQLDLDKLHMAARINLTAWLSGA-STRYIAFRIG 179 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R + V ++F F+G E A+A + L+Q + A + ++V+Q V+ CN Sbjct: 180 RGAKDVTEYFAKFVGCEEYTRARADTQNLVQVTKRYCANNNFSDDKSEDVKQFVFERCNT 239 Query: 233 QLQAGEEIELKSLSKELA----GVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS 288 L GE + L+ +S+ L + F E A + L P ++S LR LT+++G Sbjct: 240 WLDEGEPVLLERISELLDSSFTPEVQGRFLEIAQGDPFFLSNEIPIEKSALRGLTRYSGK 299 Query: 289 GGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 L+++FD+ L+ +F++ + + + I P L++QL Sbjct: 300 TQKLSLSFDSDLINISVFYNESDEEIRITDVPIKLKEQL 338 >UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFM6_9GAMM Length = 333 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 153/331 (46%), Gaps = 8/331 (2%) Query: 3 LDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLF--- 57 + + +H + + + R+ T + +L + + + K YG F Sbjct: 1 MTLKHCIIHSIERATPGTEVSTSFREQENPATGPAYSLFEQLKQSFQRSSQKQYGFFDRE 60 Query: 58 SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 S+++ L +R QG F S+ L+ ++ + A ++ + + L Sbjct: 61 SDDNPLPGWIREHHQGTSSFSRVSQRILEHLQQKMGENDEAFSADLMIAVDSVMDQDQLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + + ++ + +++ +LD+ + Y+D N AR+ + EW +S +Y++ + R + Sbjct: 121 IFWIDHVDASQIDHSLDVVHSRYIDSNKMAYSARVFVDEWL-QEDSQKYMSLITSRGSKP 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 ++D F FLG S G+N + L VD + L + + + R Q+ YC +Q + G Sbjct: 180 ISDAFSGFLGFSTGVNLIEETHEFLSIVDQYAQS--LPEDKVSDHRGQILEYCVDQDKQG 237 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 + + +S++L +F+EF AE+ DRS+L++ ++ G ++I+F Sbjct: 238 APVVFEDISRQLDEGQPSNFSEFVAERQQAPAVEMYTDRSSLKRYVRYFGRDKNMSISFS 297 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQ 328 A + G+ I +D TLTIK P +L+ QL+ Sbjct: 298 ADMFGQEIVYDEVAGTLTIKQIPKSLKQQLK 328 >UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84ES1_9BURK Length = 340 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 157/337 (46%), Gaps = 10/337 (2%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEESE 62 +N + +H+L+K +V R + L TE V +++ +H +Y++K +K YG F + Sbjct: 3 TVNHVIVHKLVKEKLGKASVVERAAALTVTEPVKKLILAIHELYASKASKGYGRFEADEV 62 Query: 63 LAQTL----RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA-VEYLL 117 + + F+ S++ L + P A GG+VL A V + L Sbjct: 63 NYPSSAILRKTFIDQSASFVDGSKSLLSVLSAKAGAVPLATGGYVLMAQVTNAAQVTWFL 122 Query: 118 VAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGR 176 VA+++N+ +++ L++ ++D+ + + R++LT+W E RY+ FLK R Sbjct: 123 VAIINNIDGSVIDDKTLEVVDAMHVDLANLRVAGRVNLTDWTNGDEDIRYVGFLKQRG-- 180 Query: 177 KVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQA 236 +VAD+F FLG +E + + + L+ + F LD+ ++ + ++YC+++ + Sbjct: 181 EVADYFKVFLGCNELIADTEETKKLVGVLKKFAKSQGLDQKAEEDFLKSAFNYCDDRNKN 240 Query: 237 GEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINF 296 E + L++LS E E ++ + F D +++ L + T++ Sbjct: 241 DEPLSLEALSNAAWPHEPKKLQEAFVEGEVQISDGFVPDGRSIKALVRLRYKTDYWTVDI 300 Query: 297 DAMLLGERI-FWDPATDTLTIKGTPPNLRDQLQRRTS 332 D + L + ++ LT+ P L+ +L R T Sbjct: 301 DRLALSQGYADYNQKKGELTLLKLPEALKAELDRETK 337 >UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS0_SACD2 Length = 348 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 79/350 (22%), Positives = 160/350 (45%), Gaps = 19/350 (5%) Query: 3 LDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEE 60 + + +I H++ + + + R + + E E+ + K YG FS++ Sbjct: 1 MALTRIIAHRIERTVPTEQARIQTRQTCWSQDGRIEECFREMKQAALKRSGKDYGRFSDD 60 Query: 61 ---SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 LA L + F +F+ A ++ EL K G F +F H + ++L Sbjct: 61 RANHPLASWLEEYHAEKMSFESFTAKAMAHIKLELDKTEVVTGAFFVFAHEKLEEADFLH 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW--ETNPESTRYLTFLKGRVG 175 + + + S ++ L++ + YLD + + A+I+L +W E +T L+ R Sbjct: 121 IYFVQHNSGQYIDAELEMAESFYLDTDGVRLAAKINLDDWLGEDVHRKNNAVTLLRWRGE 180 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 +++++ F +G +E ++ A+ L+ V+++T E L ++ + QV YC EQ + Sbjct: 181 KELSEVFEASIGFAEKIDLTAETEAFLEVVNEYTKE--LPDVVKEYTKAQVVDYCMEQDK 238 Query: 236 AGEEIELKSLSKELAG----------VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKF 285 G+ + +K LS +L F+EF + + D++ LRQ + Sbjct: 239 VGKPVVIKELSTQLIEAPKLPTEESYTPPPPFSEFIKQNKPLAKPELIPDKAKLRQYVRI 298 Query: 286 AGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 +G L+++F + LG+ + +D +D+LTIK PP+L+ +L + + Sbjct: 299 SGRNDFLSMSFASSCLGDTVVYDAESDSLTIKNIPPSLKSRLLKHVRESD 348 >UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marinomonas RepID=A6VYD3_MARMS Length = 342 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 153/343 (44%), Gaps = 14/343 (4%) Query: 3 LDINQIALHQLIK-RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF---- 57 + I+ + +H++ K E+ L+ R + + A++ +++ G F Sbjct: 1 MSISNLIVHEIQKHEGERKAILIARPNENPVDGQAEALSAQVTNLFNRSGMNTGRFVNPQ 60 Query: 58 --SEESELAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 E ++L L + + DF F++ L A+GG + F HY Sbjct: 61 GSEEGAQLPALLFKHFKNDTFVDFAGFTKECAAEYLKYLEPVEEAEGGLLWFNHYELHDT 120 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 +L + +L + + +L ++ +++ + RI+LT W+ E RY++F GR Sbjct: 121 HFLYIVMLKRKKGIGLGADLSLSQIEQIEMEKLHMSLRINLTAWQAGDEG-RYISFRFGR 179 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 + +++F F+G E A + R L+ F + ++ V +C + Sbjct: 180 APKFESEYFTQFIGCDEPKVAAKETRKLVDLTAAFCQSEGFPSKQANEFKKVVSEHCQAK 239 Query: 234 LQAGEEIELKSLSKELAG----VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSG 289 Q E + +K ++ ++ F E A +++E+ +++ L++LT+ +GS Sbjct: 240 AQDREPLAIKEIASQVESRFSVEQANKFLEIADSDSFKMEKEIFVEKAALKKLTRLSGSS 299 Query: 290 GGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 LTI+FD+ LL E I +D + TLTIK P +L QLQ ++ Sbjct: 300 RALTISFDSELLAESIVFDADSGTLTIKDLPKSLLKQLQAMSN 342 >UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 Tax=Vibrio cholerae MZO-3 RepID=A2PW68_VIBCH Length = 351 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 87/348 (25%), Positives = 175/348 (50%), Gaps = 23/348 (6%) Query: 2 SLDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 +++I + LH LIK +EL R E E+ +++ ++ +++ G F E+ Sbjct: 3 AMEIKNVILHNLIKEEKSTKVELDDRKKENEVNESALQLSKGINEKFNSTGLNTGHF-EK 61 Query: 61 SELAQTL--------RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E+ + L + +G ++F+ F+++A L+ +L P A GG + F HY + Sbjct: 62 PEVDEQLTHFEFLLEKYYNEGFDNFVGFTKSAATYLQKQLMSAPSAKGGHLWFNHYTHAG 121 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET-NPESTRYLTFLK 171 +L V +L MR+++ L++ +D++ + ARI+LT+W+ + +S RY++F Sbjct: 122 EHFLSVVLLREKMVMRIDK-LELEQFDSVDLDKLHMAARINLTKWQNADEQSNRYISFKI 180 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G+ +KV D+F F+G E A + L++ ++++ D+A+ + V+ + + Sbjct: 181 GKEAKKVTDYFAKFIGCKEFTQAATDTKALVKCIEEYCRHHLFDEAKTEMVKNKAHDQIV 240 Query: 232 E-QLQAGEEIELKSLS---------KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ 281 E + + + I L +LS +++ + F + + + L D + LR+ Sbjct: 241 EWRKEEKQTIHLDTLSTVLDATFLPEDVDEDKKGQFLRISQGEPHNLNNELATDPNALRR 300 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPAT-DTLTIKGTPPNLRDQLQ 328 L K++G ++++FDA LLG + ++P LTI P L+DQL+ Sbjct: 301 LKKYSGRNKHISLSFDAKLLGNSVVYNPENGGVLTITEIPKTLKDQLE 348 >UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2 Tax=Haemophilus RepID=B8F5A2_HAEPS Length = 323 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 149/325 (45%), Gaps = 11/325 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEES 61 +DI I H L K + +++ + + TET V + +L Y+++ K +G F + Sbjct: 1 MDIKHIIYHILNKEVQGMPQIIPSPNEIPTTETHVNFLTKLTESYASRAGKGFGQFDSDE 60 Query: 62 ELAQTLRLQRQG--EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + R+ R+ +DF A + L ++ + P A GG V H+ +YLL+A Sbjct: 61 DSYPMPRIVREYLVNQDFYAATERMMNTLSTKIQEQPLATGGKVFIVHFAENQNDYLLIA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +LS + + + L + H RI+LT W+ + RY++FLKG+ +A Sbjct: 121 ILSEKMAFSTT-DWQLVEEEVLALEHLKFAGRINLTAWQAGEQ--RYISFLKGQG--DIA 175 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F FLG ++ L A+ + + L++ +++F E +LD ++ ++ + +E E Sbjct: 176 QYFKLFLGCNDVLIAQQETKKLVERLEEFANEQELDVEQKTEFFERAQEHLHEISNNEEP 235 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAM 299 ++ + + + + A+ + + F D+ ++++L+ F G ++FD Sbjct: 236 FSAETFANRVWSENPQELKDKLADAENGVADGFIPDKRSIKKLSTFTGKTRHWRLSFDRT 295 Query: 300 L-LGERIFWDPATDTLTIKGTPPNL 323 L I + + + I P +L Sbjct: 296 AVLSGDIELN--SGKIIINNPPESL 318 >UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reinekea blandensis MED297 RepID=A4BKP6_9GAMM Length = 334 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 11/332 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEES 61 + + +HQLI+ L LRD L + + ++ + Y+ +K YG F+EE+ Sbjct: 1 MSLKHAIVHQLIRNTTTTA-LNLRDDELTVDDQLTHLMTQTKTAFYNRSSKQYGQFAEEA 59 Query: 62 ELAQTLRLQRQ-GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + L Q Q G F + +L+ ++ + G F H + E L Sbjct: 60 GTFKALAQQWQAGSVSFTTLTEQLMKQLQLDVEQQELDIDGHWFFAHETLESSENLWFFH 119 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L + + + + +D++ +D +DLT N + +YLT G R + Sbjct: 120 LKHKDGLMLTQAMDLSGARLIDFAKLGFGGYVDLTAMAANEQ--KYLTVSFGFGDRSLQS 177 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 ++F+ + +N L+ V + L + + N R++ YC EQ + GE + Sbjct: 178 ALLNFVNFVDTINTAVDTERFLEIVKAY--SETLPQEKGSNYRKKAVEYCTEQDKLGETV 235 Query: 241 ELKSLS----KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINF 296 ++ E+ + + E + F +R++L++ ++ G ++I+F Sbjct: 236 VADEIAVVLKDEVGTDGPQTLASYMEVTQPEAKREFIPNRASLKKFQRYTGKTKEVSISF 295 Query: 297 DAMLLGERIFWDPATDTLTIKGTPPNLRDQLQ 328 +LG+ + +DPA+++LTI P NL QL+ Sbjct: 296 SNEILGKNVNFDPASESLTITNLPSNLLKQLK 327 >UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E894_GEOLS Length = 371 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 154/364 (42%), Gaps = 33/364 (9%) Query: 3 LDINQIALHQLIKRDEQNLEL-VLRDSLL-EPTETVVEMVAELHRVYSAKNKA--YGLFS 58 + IN++ +H+L+K Q ++ LR ++L V+++V + +Y +N + YG F Sbjct: 4 IIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTFR 63 Query: 59 E-------ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 + + F+A +R A L + + GG++LF Y Sbjct: 64 TGDGSGAFPGSFSTYTESATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSSA 123 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARID---LTEWETNPESTR--- 165 + ++A++ +R++E L+ LD+N AR++ L+ + PE+ R Sbjct: 124 QSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQAARVNFGKLSAYLAAPEADRQEL 183 Query: 166 -YLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQ 224 YL+F+ G+ A +F+ LG + G + L++ F R+ + Sbjct: 184 SYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKRFKD 243 Query: 225 QVYSYCNEQLQAGEEIEL---KSLSKELAGVSEV--------SFTEFAAEKGYELEESFP 273 + +Y + + + GE ++L + ++++ E + + + + FP Sbjct: 244 NLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPVEFP 303 Query: 274 ADRSTLRQLTKFAGSGGGLTINFDAMLLG----ERIFWDPATDTLTIKGTPPNLRDQLQR 329 +++ L++ T S + F+ LG +I++D + +TIK P +L +++ Sbjct: 304 VNKAALKKHTHIIYSADNWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKICE 363 Query: 330 RTSG 333 Sbjct: 364 ELEN 367 >UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4T5_CAPGI Length = 346 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 158/339 (46%), Gaps = 13/339 (3%) Query: 2 SLDINQIALHQLIKRDEQNL-ELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSE 59 +L+I I +HQL+K + + D +L ++ + L Y K++ +G+FS Sbjct: 7 NLEIKNIIIHQLLKEAGNGIVDAKSADHVLNISDREKLFLGNLDEAYYKKSEIIHGIFSG 66 Query: 60 ESELAQTLRL-QRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + L L +G+ F FS ++ L + A GG+++ C Y L E LLV Sbjct: 67 NFPKFKDLLLEYTEGKNSFYDFSINVMNHYKEILQRTIAATGGYMILCEYTKLKKELLLV 126 Query: 119 AVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWET------NPESTRYLTFLK 171 +++N VNE +L ++ L+++ DI I+LT+W+ + YL+F+K Sbjct: 127 LMINNKEGFVVNETDLSLSNIKKLELHKVDIACSINLTDWKAIENEDLTTDRKTYLSFVK 186 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G + ++ +FM F+ + LL+A+D+F DK + + V SYC Sbjct: 187 G--LKDISLYFMQFIDVDNKNTSTESTNRLLRAIDEFAKREGWDKERKIQRQDDVCSYCL 244 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGG 291 +++ +EI L +S + + F + A + + + ++S LR L + Sbjct: 245 DRIDKKQEILLSYISAIMDPDNPEKFQDLATDDEFGVSSVINGNKSKLRLLKRITYKDDN 304 Query: 292 LTINFDAML-LGERIFWDPATDTLTIKGTPPNLRDQLQR 329 L + F+ L L + I +D + LTIK P L+ Q+++ Sbjct: 305 LRLEFNTKLFLDKTIIYDEKNNKLTIKNIPELLKQQIKK 343 >UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MQ44_VIBVY Length = 364 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 159/366 (43%), Gaps = 35/366 (9%) Query: 1 MSLDINQIALHQLIKRD-EQNLELVLRDSLLEP-TETVVEMVAELHRVYSAKNKA--YGL 56 M++ I++ +H+LIK E+ L R SLL E+V ++A + +Y KN + YG+ Sbjct: 1 MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGV 60 Query: 57 FSEES-------ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR 109 F ++ + L+ +EDF+ S++ L E FA GG +LF Y Sbjct: 61 FRDDEASGSVPDSFYEYSELEDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYE 120 Query: 110 YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------ETNPE 162 V + L A++ S ++ L + Y+D++ +I+ +++ + + Sbjct: 121 SDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAIKINFSKYNAYQNTDDIERQ 180 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV 222 + YL+F+ + + A +F+ +G G + + + F + KA N+ Sbjct: 181 DSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL 240 Query: 223 RQQVYSYCNEQLQAGEEIELKSL-----------SKELAGVSEVSFTEFAAEKGYELEES 271 ++ + Y ++ ++ E L + +E A F + + + Sbjct: 241 KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPE 300 Query: 272 FPADRSTLRQLTKFAGSGGGLTINFDAMLLG----ERIFWDPATDTLTIKGTPPNLRDQL 327 FP +++ L+ +T G L + FD +G R+++D A + IK P +L D+L Sbjct: 301 FPVNKTKLKTMTHLVYKGDDLHLEFDKEDIGGNPSARVYFDGAK--VIIKDLPQDLIDKL 358 Query: 328 QRRTSG 333 ++ +G Sbjct: 359 NQQING 364 >UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBF6_HAHCH Length = 346 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 142/335 (42%), Gaps = 8/335 (2%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLE-PTETVVEMVAELHRVYSAK-NKAYGL---F 57 + I+++++ L K E + L + L R+++AK KA+G Sbjct: 1 MAISELSIQVLEKFSEDDASQTRIPQQLPKTGADNEAVFHTLRRLFAAKTGKAFGRINLH 60 Query: 58 SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 +E L+ +G+ F + +++L P ++L+ H + L Sbjct: 61 AEGQSFGPWLKDWYEGKMSFQQLTEKGLAEFKEKLDVIPLTTQSYLLWIHDQQGDARTLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + VL + + V L I P +LD RI+L + + +L+ R RK Sbjct: 121 IFVLESSVTNVVTNELQIEPIEHLDPQAITFALRIELDPLFASNQPDCASVYLQ-RNLRK 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 + + G + ++ + +L ++ F LD ++++ +C++Q + G Sbjct: 180 IGEAGCHSFGFATHVDTVKETEVVLSGLERFA--ESLDPKSAAKLKKKAVEFCSDQEKLG 237 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 E ++++ LS + + F F E E + D L+QL +FAG G G++++F Sbjct: 238 EAVQIEELSIAIDEQNPDKFAHFMREAIPEAPAALRPDSRKLKQLVRFAGRGSGMSLSFS 297 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 + + E I +D D L I P +L+ QL+R S Sbjct: 298 SEAINESIIYDSEKDALIIMEIPKSLKAQLKRYLS 332 >UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudomonas sp. ND6 RepID=Q6XUL1_9PSED Length = 253 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 5/216 (2%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 + I I +HQ+ K+ + L RD+ L ++ V M+A+L+ Y+AK KA+GLF E Sbjct: 1 MPIRHIIVHQIDKKPDGTPAVLHARDTELGASQAVENMLADLNESYNAKQGKAWGLFHGE 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 S ++ L+ +DF AFSR A L+ + + + GG VLF HY+ +YL Sbjct: 61 SGAYPFSRWLKDYLDENQDFTAFSRHAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLT 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 VA+L + + VN+ LD+ P +LD+ + ARI+++EW+ N +S +Y++F+KG+ GRK Sbjct: 121 VALLHHSEGVAVNDTLDVTPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGRK 180 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 V+D+F DF+G EG++A +N Q + F E Sbjct: 181 VSDYFRDFIGCQEGVDAPRRNPHPAQGIQRFRRERG 216 >UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SLQ5_ACIJU Length = 361 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 152/359 (42%), Gaps = 28/359 (7%) Query: 1 MSLDINQIALHQLIKRDE-QNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFS 58 MS I +H + K N + RD+ + + +V+ ++L YS +G Sbjct: 1 MSFQILNTVIHAVKKEKNSTNATPIYRDNCINNNDPLIVDFTSKLLSAYSNAANTWGDIR 60 Query: 59 E------ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E +L + + Q F FS ++ + + A GG+VL HY A Sbjct: 61 EAEDNIFHQDLIKWYTPEEQLYYSFYDFSTDVVDQITLAIKEKNTATGGYVLMIHYEQAA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET-------NPESTR 165 VE+L+V +L + +++ L++ + +++ R++L W+ + R Sbjct: 121 VEFLMVVMLKLETRFGIDDALNMFKSETFSMDNFHESVRMNLKTWQNRSNSVGEDGNPER 180 Query: 166 YLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE-----RQ 220 F+K + +V +F LG + A L++A +D+ A + + E ++ Sbjct: 181 CFAFVKKKNEDEVTRYFRTALGCENYAESAANTNHLIKATEDYVATLKFNCEEEAIAAKR 240 Query: 221 NVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE-----VSFTEFA--AEKGYELEESFP 273 R +++ +L+ E + LK ++ EL + +F ++ Y ++E+F Sbjct: 241 EKRDKLHELLAVKLKNKEPVSLKWVANELFPTPDFDIENNELLKFIKNNQEKYPIDETFK 300 Query: 274 ADRSTLRQLTKFAGS-GGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRT 331 + + L + G+ G T+NF L + +F++ + LT+KG + +Q+ R Sbjct: 301 PYKPRVNALGRVRGTLAGDTTVNFPVSELNKTVFYNIQSRELTLKGVDGKMHEQIMRSL 359 >UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN26_9GAMM Length = 355 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 145/354 (40%), Gaps = 28/354 (7%) Query: 3 LDINQIALHQLIKRDEQ-NLELVLRDSLLEPTETVVE-MVAELHRVYSAKNK-AYGLFSE 59 + + +A+ +L+K E + R ++ +E + + L+ +S ++ +G F+ Sbjct: 1 MQLKHLAIRELVKESEDAPARITERGGIIPTSEPIANQLFETLNAAFSRRSSLTHGSFNH 60 Query: 60 ESEL-------AQTLRLQRQGEEDFLAFSRAATGRLRDEL--AKYPFADGGFVLFCHYRY 110 ++E +T E DF A + + +L + A GG+VLF Y Sbjct: 61 DNEEGYPFISAFETFVGSEASETDFTALTDKSMAQLAVAINNPSAHTAHGGYVLFALYAS 120 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 EYLL+A++ + + + + +L ++++ ARI+++ ++ +S YL+F+ Sbjct: 121 DRYEYLLIALVRDKAGIGFDNDLHPTEIMEVNLDQLHQGARINISTFKKKQDS--YLSFI 178 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + ++ +F G ++ ++ L++A DF + + ++ V + V SY Sbjct: 179 GSKEKGEITHYFSTAFGCTDVTPSRQSTGELIRAARDFCNQNNMS-DRKEEVVEDVVSYL 237 Query: 231 NEQLQAGEEIELKSLSK--------ELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQL 282 Q E L + E A +F FA + Y + + F ST+ + Sbjct: 238 ERQRSDKESANLNEVQNLFDAYIPPEQAETIAGTFGTFANKGPYNVSQEFQPHTSTINRF 297 Query: 283 TKFAGSGGGLTINFDAMLL-----GERIFWDPATDTLTIKGTPPNLRDQLQRRT 331 K ++F L G+ I +D + I P + +Q++ Sbjct: 298 AKLKVKADNWCLDFTKRNLGDINTGKDIEFDEDNGRIIINKLPSKVINQIREAL 351 >UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K6S1_PSEF5 Length = 376 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 133/372 (35%), Gaps = 41/372 (11%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDS---LLEPTETVVEMVAELHRVYSAKNKA--YGLF 57 + + +H K +L + L + +V ++ + + + YG F Sbjct: 2 ITLKTAIIHSFKKTVHTDLVSDVVKKDVVLDTQNPALESLVEGINGLIGKEGNSVVYGQF 61 Query: 58 SEES---ELAQTLRLQRQ---GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 +++ E +F+ + A +L ++ A GG +L Y Sbjct: 62 ADDGRQGPFPDRFSAYVDVCGDEAEFIELTHLAMDQLVEQARDQTLATGGHILCAQYTSG 121 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------------- 157 A ++ LVA + ++++EN +D+ ARI+ ++ Sbjct: 122 ASDFFLVASIKQRGGIQLDENYVPKAIQEVDLKTVQQAARINFVKFASVTAAACTAAGNT 181 Query: 158 -----ETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA 212 + + YL F+ + +D+F+ LG ++G+ + + + V F Sbjct: 182 VVDAEDAEEVDSTYLCFISRGRDSQASDYFISALGCAKGVASGRATKNAIDYVGRFFRNN 241 Query: 213 QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFT-------EFAAEKG 265 + K ++ V Y ++L G+ L ++ ++ ++ Sbjct: 242 KELKPFAYKAKEAVVRYLQDRLADGKSARLDAICHAAIQHVPPDLVDEIAGLKDYLNDEK 301 Query: 266 YELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGE----RIFWDPATDTLTIKGTPP 321 + + E F + +L++ T+ G ++ F+ LG+ +++D LT+ Sbjct: 302 HRVPEDFTVNAKSLKEKTRIKGEATSWSLQFERGALGKEATSDVYYDEGRKKLTLSNMNQ 361 Query: 322 NLRDQLQRRTSG 333 L D +++ Sbjct: 362 ELVDLIEKELQA 373 >UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RPK1_XANCB Length = 393 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 140/355 (39%), Gaps = 33/355 (9%) Query: 8 IALHQLIKRDEQNLELVLR-DSLLEPT-ETVVEMVAELHRVYSAKNKA--YGLFSE---E 60 +H L K N+ V R L+ + V + +L R+ +G F E Sbjct: 37 AVIHSLEKEAHSNISQVRRAPGPLDVSLIQVQSLGQQLSRLVGRDGSTVFWGQFGTNNRE 96 Query: 61 SELAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + + + F+ + A L K + GG+V F Y A +LLV Sbjct: 97 GQFPSAVENLTASSDLATFMTLTEVAMAELVAAAGKELLSTGGYVFFMVYEVNATPFLLV 156 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE-----------TNPESTRYL 167 A++ ++ ++ ++ LD++ ARI+LT +E + E YL Sbjct: 157 AMIKERGALSLSVDMVPTDIQELDLSKLHQAARINLTRYEQALNVGSADVDADEEERTYL 216 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVY 227 F+ +VA +F+D LG +G+++ + + AV F + + K + + VR+ V Sbjct: 217 CFVNKGARNEVAKYFIDALGCEKGVSSNRATKSAIDAVRKFVSSKKEIKPQARKVRRAVI 276 Query: 228 SYCNEQLQAGEEIELK--------SLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTL 279 + L G I + +L EL E +E+ + ++ ESF L Sbjct: 277 DHM-AALPQGAVITVGTLVAVVRVALGDELVEHVEG-LSEYLNGEEAQVPESFVVSAQYL 334 Query: 280 RQLTKFAGSGGGLTINFDAMLLGER---IFWDPATDTLTIKGTPPNLRDQLQRRT 331 + +T+ G ++F+ + E + ++ A +L I+ P +++ Sbjct: 335 KSVTRITAQAEGWRLSFEDTEISETEGPLIYNRADKSLRIRRLPDETAKKIEAAL 389 >UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSV2_MARMS Length = 349 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 148/352 (42%), Gaps = 26/352 (7%) Query: 3 LDINQIALHQLIKRDEQNL--------ELVLRDSLLEPTETVVEMVAELHRVYSAKNKAY 54 + I + +H +++ + + E +R S ++ +L ++ + + Sbjct: 1 MTIKHVIIHVVMRDESTGVLHKQLRTEENKIRSSEKTSEALAEKLTNDLRNLFGTASLSI 60 Query: 55 GLFSEESE------LAQTLRLQRQGEE---DFLAFSRAATGRLRDELAKYPFAD--GGFV 103 G F + QTL + E DF+ +R + L + GG++ Sbjct: 61 GEFGVRGDNTLKPAFEQTLETFYETPETCSDFVQLTRRFAEQYYAILTEENLTTVKGGYL 120 Query: 104 LFCHYRYLAVEYLLVAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPE 162 +F Y E+L V +L+ + VN +L++ P+ LD+ + A I+LT+W + Sbjct: 121 VFYQYTARGQEWLAVVILNKTEGIDVNSTSLEVVPSEILDLKTLHLAASINLTKWMLGDD 180 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGAS-EGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 TRY+ F GR ++ D+F F+G + A + L AV +F E+ ++ + N Sbjct: 181 -TRYIRFKTGRAA-QIRDYFEKFIGCQRDKYAAVVETHQLKAAVQNFAKESGYNEEKVSN 238 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ 281 + + + E+ + E + LK+L+ + F E A Y L E D++ L++ Sbjct: 239 KVDKTHQFIIERQKDQEPVLLKALANAVFPDLSEEF-EREARDTYNLSEEISIDKNELKK 297 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 K +++F+ L+G++IF + + I P L + + Sbjct: 298 YVKIFVQSKAFSMSFERDLVGKQIF--VVNNEVRISQPPELLINAINEELES 347 >UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacter RepID=B7I7X8_ACIB5 Length = 348 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 162/350 (46%), Gaps = 22/350 (6%) Query: 3 LDINQIALHQL-----IKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF 57 + I I +H++ K+ + L ++D+ + E+ A+L +++S+ + G F Sbjct: 1 MSIQHIIVHEIRRVKEEKKSTETLIAKIKDTENDLRSLNGELAAKLLKLFSSSSLMVGQF 60 Query: 58 SEESE------LAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR 109 S ++ Q L GE DF+ +R + L + GGF++F ++ Sbjct: 61 SIGNDTEKKPAFEQGLDNFYSGENCLDFVEMTRELAEYFKTFLVENKSITGGFLVFFEFK 120 Query: 110 YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTF 169 L VAV++ ++ +N +L+ LD++ + A I++TEW + S RY+ F Sbjct: 121 GDEHTKLAVAVINKSNATDINPDLNFIAKEILDLDKLHLGATINITEWR-DEFSERYIRF 179 Query: 170 LKGRVGRKVADFFMDFLGAS-EGLNAKAQNRGLLQAVDDFTAEA-QLDKAERQNVRQQVY 227 G+ +V D+F F+G + A + + L +A++ F E +L + + + Sbjct: 180 KNGQ-SEQVTDYFQKFIGCEVDKQAANEETKKLKEAIESFATEKLKLPQTAADDYLALAH 238 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 SY N+ + G+++ L +++K + F E+A+E G+ L ++ L+ KF+ Sbjct: 239 SYINDCITKGDDVVLSNVAKHVFPADSDEFFEYASE-GHNLSGILQISKTELKGFKKFSS 297 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKG--TPPNLRDQLQRRTSGGN 335 S L+I F LL ++I + D L I +L +L+ T+ N Sbjct: 298 SRKDLSITFAKALLNDKIKF--ENDILKIDSSLLSDSLVAELKAATTASN 345 >UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 3 str. JL03 RepID=B0BPC6_ACTPJ Length = 363 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 141/361 (39%), Gaps = 30/361 (8%) Query: 1 MSLDINQIALHQLIKRDEQN---LELVLRDSLLEPTETVVEMV--AELHRVYSAKNK--- 52 M++ I +HQ+ K+ L L+ +L + V AE S KN Sbjct: 1 MTIQIKAGIIHQIKKQKNSPSANAVLHLQKTLHSTNNHLSTFVGYAEQQLQKSGKNNSIS 60 Query: 53 -AYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 +G+ + S++ + +Q + D+L S+ L + + G +V YR Sbjct: 61 GGFGIQNTLSKVLASSYFNQQAQIDYLQISKDLAQGLYHFVTQKTATTGEYVPMVFYRKE 120 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET------NPEST- 164 V+YLL++++S + ++ + + T +D + + +I+LTE + + Sbjct: 121 EVDYLLISLISLNKYINIDAQGEFSDTSVIDNDALKVGIKINLTEMAAHYAMPNDEQPEV 180 Query: 165 RYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQ 224 Y+ +++ R K+ D+ DF+ E ++ LL+ + ++ A D R V Sbjct: 181 CYIQWIQ-RGSSKLPDYIQDFIPVGERIDNSKTTTALLKNIKNYVATTFADPKIRHKVET 239 Query: 225 QVYSYCNEQLQAGEEIELKS--------LSKELAGVSEVSFTEFAAEKGYELEESFPADR 276 V + + E + ++ + F ++ + L+ SF D Sbjct: 240 DVVTLLRTKSDNREAVHIEEDIDVLLNSALTTYGLTDKPQFAQYRQDNNIVLDSSFNVDA 299 Query: 277 STLRQLTKF--AGSGGGLTINFDAMLLGERIFWDPA---TDTLTIKGTPPNLRDQLQRRT 331 + L+ KF + + G+ I D LGE IF + L I+ P QR Sbjct: 300 NKLKPYEKFDLSLANKGILIKGDMGQLGESIFVEEDESHRKYLKIELAPDEFEQITQRYE 359 Query: 332 S 332 S Sbjct: 360 S 360 >UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12R01_SHEDO Length = 357 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 142/351 (40%), Gaps = 35/351 (9%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSEESE 62 I + +H+L K + ++ + L E ++++ +L ++ + +G F + Sbjct: 3 SIKRFVIHELFKDKKPDI---AGELLNLDNEIILKLAKDLVKIKDGRTAVLWGQFKGSGD 59 Query: 63 LAQTLR-LQRQGEED-----FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 L+ L + +ED L + G L +E+ + + GG++ F Y L Sbjct: 60 FPLKLKELDAELKEDERSVKLLELTEHTMGALYEEIV-HTNSKGGYICFIEYESFLDCRL 118 Query: 117 LVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE---TNPESTRYLTFLKGR 173 + A+++N + +++ NL ++D++ I+++ + YL+F+ Sbjct: 119 MAAMITNTAGVKLT-NLKPTKEVHVDLSKLHQAVDINVSGYSKSIKGDFKKNYLSFI--- 174 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE- 232 D+F + + + + DF A+ +D +++ R Q+ Y ++ Sbjct: 175 GKGTHTDYFTNAFDCINKITPAKAVNKAPEVLKDFLAQFYVDNTTQKSARAQLVKYLSDN 234 Query: 233 -----QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 L +EI + +L + SF F+ + YE+ +F A +S + +L K Sbjct: 235 IGKEVHLAKIDEIAVSNLPASCTDEEKQSFIAFSKQDKYEMPATFEARKSNVEKLAKIYY 294 Query: 288 SGGGLTINFDAMLLG---------ERIFWDPATDTLTIKG--TPPNLRDQL 327 + NFD +G + I ++ D + I+G P +R + Sbjct: 295 ATDAFNFNFDLENIGLVGVEADSNKPILFNKDNDDVIIRGRMITPEVRAAI 345 >UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7NA37_ECOLU Length = 391 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 140/347 (40%), Gaps = 33/347 (9%) Query: 13 LIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE---SELAQTLRL 69 L K D + + L + E E + + + +S KNK + + S + L+ Sbjct: 46 LEKNDSRAFDYRLGEVWDLKNEVTSEFITRIEKKFSRKNKFHNFLDSDHNPSSIPTILKK 105 Query: 70 QRQGEEDFLAFSRAATGRLRDEL---AKYPFADGGFVLFCHYRYLAVEYL--LVAVLSNL 124 +F+ SRA +L+ ++ GG V+F HY+ E L L+ V+ + Sbjct: 106 YINKNNEFIDLSRAIIEKLKHNANNESRVAQLQGGSVVFIHYKSTEPEDLGKLLIVMVDK 165 Query: 125 SSMRVNENLDINPTHY--LDINHADIVARIDLTEWETN---PESTRYLTFLKGRVGRKVA 179 S ++ + PT ++ + A DLT +E + + Y+ FL+G+ + Sbjct: 166 QSAYDFDSDKLTPTRLNPINTDALRQAAMFDLTLFEASYPENKGDSYVHFLQGKSK---S 222 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG-- 237 DFF D LG + K + L A+D F ++ L + R + +V S ++ + Sbjct: 223 DFFKDSLGCRHDSDNKRSIQQLFSAIDIFASKNSLGRVLRDTIDNEVKSLLEKKSKDKHG 282 Query: 238 -EEIELKSLSKELAGV------SEVSFTEFAAEKGYELEESFPA-DRSTLRQLT-KFAGS 288 + ++++ +SK + + +F +F G++++ F ++ LT + A + Sbjct: 283 NKSVKIEDISKIIDSCLTDSHKCKGTFVDFVNLNGFQIDPQFEPTPKAAESALTIEVADN 342 Query: 289 GGGLTINFDAMLLGER-----IFWDPATDTLTIKGTPPNLRDQLQRR 330 + +G+ + + IK D+L+R Sbjct: 343 DNNFKLKIMRGAIGDEKSNKPVILTDNKCEIVIK-LSQANYDELKRY 388 >UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis HI4320 RepID=B4F2P1_PROMH Length = 364 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 141/348 (40%), Gaps = 34/348 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTET--VVEMVAELHRVYSAKNKAYGLFSE 59 SL + ++ +++ + L PT+ V+ ++ + +K++ F + Sbjct: 3 SLQVLNAIAVRITPPEDEQKDWSYTLGALWPTDQQEVITFTTKVDARFHKSSKSHAKFQK 62 Query: 60 E---SELAQTLRLQRQGEEDFLAFSRAATGR-LRDELAKYPFADGGFVLFCHYR------ 109 S L + E F F + L + ++G ++F HY+ Sbjct: 63 PYPGSSFPSKLSKFLEKETSFEVFVHDFIQKKLITSARQSRASNGAILVFTHYQLQHEKE 122 Query: 110 ----YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW---ETNPE 162 + E LLV +L N ++R ENL +NP +D++ AR+D+T + E E Sbjct: 123 DGSVHKDFERLLVLMLKNTDALRFKENLQLNPVDVIDLDKFLQGARVDITRFMSEEVEDE 182 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV 222 L F+ R V +F + +GA + ++ K + ++A++ F+ + + +A R+ + Sbjct: 183 DKNNLCFI--RGTGDVRKYFTESIGAEDIISNKTSSEQCIKALEQFSHQKEFGRALREKI 240 Query: 223 RQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV-------SFTEFAAEKGYELEESFPAD 275 ++ N + G+ I L+ + ++ + V +F +F E G+E+ E F Sbjct: 241 ESKIQELFN-NCKRGQSITLEKIQTQIDAIIPVDLAEHKNTFVDFVNENGFEVNEEFEVS 299 Query: 276 RSTLRQLTKFAGSGGGLTINFDAMLLG-----ERIFWDPATDTLTIKG 318 S RQ ++ +G I +D T+ + + Sbjct: 300 ASDKRQYEWLDFETNIAKMSVRKHQIGLPGSDRPIIFDTETNEVKLTQ 347 >UniRef50_B2Q671 Putative uncharacterized protein n=2 Tax=Providencia stuartii ATCC 25827 RepID=B2Q671_PROST Length = 400 Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 130/327 (39%), Gaps = 31/327 (9%) Query: 32 PTETVVEMVAELHRVYSAKNKAYGLFSEES---ELAQTLRLQRQGEEDFLAFSRAATGRL 88 ++ VV+ + + + + K K++G+ ++ G+ +F +F + + Sbjct: 75 DSDDVVQFIGQADKKFMRKRKSHGVIKKDLMPLNTPNVFLDYLAGKLNFTSFVNSVMKLM 134 Query: 89 RDEL-AKYPFADGGFVLFCHYRYLAVE----YLLVAVLSNLSSMRVNENLDINPTHYLDI 143 + E GG +F HY+ + LL+ ++ S+ + NL ++I Sbjct: 135 QREANEDRAKLVGGNFVFIHYQVDQDKESDGRLLILMVDKKSAFNFDSNLIPEKIPSINI 194 Query: 144 NHADIVARIDLTEWET---NPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRG 200 + IDLT ++ N + YL F+ G+ ++FF LG ++ + Sbjct: 195 DALRQAVLIDLTLFKASYPNNDGEPYLHFISGKSK---SEFFKRALGCDPKVDNNRSIQN 251 Query: 201 LLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQA--GEEIELKSLSKELAGVSE---- 254 + A DDF+ + ++ ++ V + + E+ + ++I ++ ++ +A Sbjct: 252 VSIAFDDFSEKMKIKALDKIRVNKAIEDLLREKAKDPIDKKISIEDIADCVAKTLPKRRD 311 Query: 255 --VSFTEFAAEKGYELEESFPADRSTLRQL--TKFAGSGGGLTINF------DAMLLGER 304 F +F + Y +++ F R + ++ K I F D G + Sbjct: 312 IAKKFVQFVDQGEYLIDDFFEPSRDSNKEFGQIKIVDEDRDYEITFDIDSISDDKDSGAK 371 Query: 305 IFWDPATDTLTIKGTPPNLRDQLQRRT 331 I ++ +TIK RDQ+ R+ Sbjct: 372 IIYNRDDGVITIK-LARTSRDQINRKI 397 >UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TLD4_RICCO Length = 177 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 5/152 (3%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEESE 62 +I + +H+ K +V R L++ T+ V +V LH +Y K K YG F ++ + Sbjct: 26 EIRGLVVHKFEKVAHGQGVIVPRHDLVKVTDPVQRLVDALHTLYGEKTGKGYGKFEDDED 85 Query: 63 LAQTLRLQR----QGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 R R +DFL FS AA L+ + P A GG+VL H A ++LL Sbjct: 86 TFPMQRRVRAYFVDATDDFLTFSHAAMKILKGKADDVPLATGGYVLIAHIHNGARDFLLF 145 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVA 150 A++++ + + L+I ++D+N + Sbjct: 146 AIVTDTVGSAITDKLEIEDRAHVDLNKFRLAG 177 >UniRef50_C2HRJ2 Putative uncharacterized protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HRJ2_VIBCH Length = 397 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 124/350 (35%), Gaps = 41/350 (11%) Query: 6 NQIALHQLIKR---DEQNLELVLRDS---LLEPTETVVEMVAELHRVYSAKNKAYGLFSE 59 +A+H + D + R LE + + + ++ + KNK +G + Sbjct: 33 KMVAVHAMTVELEIDNSKSTVNPRFGALWPLEGEDISFQFIQQVELKFKRKNKFHGYYDS 92 Query: 60 ES--ELAQTLRLQRQG---EEDFLAFSRAATGRLRDELAKYPFAD---GGFVLFCHYRYL 111 E+ ++A L +EDF+A + T L++ + + A ++F HY+ + Sbjct: 93 ETGTQVASYLHKYIASSVSKEDFIALVTSLTSELKNAIFELRVASKVASSKIVFMHYKSI 152 Query: 112 AVEYL---LVAVLSNLSSMRVNEN-LDINPTHYLDINHADIVARIDLTEWET----NPES 163 + L ++ S E L ++++ ID+ ++ +P+S Sbjct: 153 KNDDFGRILAVMVDKKSGFDFTEESLLPKQAQHINLEALKQAVSIDVDLFDACYPSSPKS 212 Query: 164 TRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 YL F++G A +F + G +E + L +A+D + L Sbjct: 213 EAYLKFIRGSSS---ASYFRNAFGCNEKSDNGESLNNLYRAIDSYATIKNLGADFYFEAE 269 Query: 224 QQVYSY-CNEQLQAGEEIELKSLSKELAGVSEV-------SFTEFAAEKGYELEESFPAD 275 ++ + N + + + + +FT F E + + + Sbjct: 270 DKLTDFVVNIKNTERSSFSINQAASVIESALPPNRVDLENTFTTFVNESEFMINQYIEPT 329 Query: 276 RSTLRQL--TKFAGSGGGL------TINFDAMLLGERIFWDPATDTLTIK 317 +++ F+ GL +I G+ + ++ T L IK Sbjct: 330 SQQVKEHLWIDFSDQDNGLIARVHSSIEIGKKGDGKDVEFNEQTRKLEIK 379 >UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFU7_9SPHN Length = 140 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 5/136 (3%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF-- 57 M +I +A+H L R + + L LL+ T+T + +++ ++ +Y+++ +K++G F Sbjct: 1 MVTEIIALAIHDL-NRSDAGYSVALSKKLLDVTDTTLRVISTVYELYNSRTSKSHGRFTT 59 Query: 58 SEESELAQTLRLQRQGEE-DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 +E S +R + +E DFL + L E K + GG V F H+R +++ Sbjct: 60 AEGSPTEGQIRAYVEAKEKDFLGLTGKMMDNLAREAGKKSASVGGHVFFAHFRRDGSDFM 119 Query: 117 LVAVLSNLSSMRVNEN 132 LV V+++ S + +N Sbjct: 120 LVTVVTDKLSAALTKN 135 >UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48MF5_PSE14 Length = 204 Score = 90.8 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 + I +H + K+ + L RDS L ++ + M+A+L+ Y+AK KA+GLF E Sbjct: 84 MPIRHCIVHLIDKKPDGTPAVLHARDSELAESQAIENMLADLNESYNAKQGKAWGLFHPE 143 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDEL 92 S + L+ G DF AFSR A L+ + Sbjct: 144 SGAHPFSGWLKEYLDGGNDFTAFSRTAVEHLQKLM 178 >UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S2L9_ALTMD Length = 365 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 124/331 (37%), Gaps = 35/331 (10%) Query: 32 PTETVVEMVAELHRVYSAKNKAYGLFS---EESELAQTLRLQR--QGEEDFLAFSRAATG 86 VV+ E + ++K + S + LA + +G+ F F ++ Sbjct: 33 TNSYVVDFAKEAEQKIRKRSKNHAKISFPPKPKSLASSFHNHLISEGKISFFDFVKSMQT 92 Query: 87 RLRDELAKYPFADGGFVLFCHYRYLAVE----------YLLVAVLSNLSSMRVNENLDIN 136 L +F Y+ + LLV +L + S++R N++ Sbjct: 93 ENSIALKTSRVQSKVVQIFLKYKKEREDSTEDNTSYVENLLVVLLKDKSALRFNDDGAPR 152 Query: 137 PTHYLDINHADIVARIDLTEWETNPESTRYL--TFLKGRVGRKVADFFMDFLGASEGLNA 194 T+ +D A I++ E+ + + + +F+ G G ++F+DF A + Sbjct: 153 GTNIIDFEDVMQGAIINIGEFVESISEKKDIDVSFINGSGG--TTNYFVDFFDADNLIKN 210 Query: 195 KAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGV-- 252 ++ A++ F +LD+ +R+ +V + + ++ LS + Sbjct: 211 NESVTNVIDALNKFLEHKKLDRTQREECISKVVGRIDYNERQSFATKVHELSAVIYSTLR 270 Query: 253 -------SEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSG--GGLTIN---FDAML 300 S SF +F E Y++ E F +S +L + G L + F + Sbjct: 271 KEENIEISSSSFEDFIHEYNYKVNEEFKVTKSDRDKLVFISLDTEVGELKLKKSLFKGVG 330 Query: 301 LGERIFWDPATDTLTIKG--TPPNLRDQLQR 329 + ++ + LT+K P + ++L++ Sbjct: 331 RKGNVDFNSNNNELTVKTKIKDPAIIEELKK 361 >UniRef50_A6N5K4 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=A6N5K4_PSEAE Length = 153 Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + I +H + K+ + L RD+ L ++ + ++A+L+ Y+AKNKA+G F ES Sbjct: 1 MPIKHAIVHLIEKKPDGTPAVLHARDAELGDSQAIENLLADLNESYNAKNKAWGFFQGES 60 Query: 62 ---ELAQTLRLQRQGEEDF 77 + L +G+ DF Sbjct: 61 GAYPFSGWLGEYLEGDRDF 79 >UniRef50_Q72ZR6 Putative uncharacterized protein n=1 Tax=Bacillus cereus ATCC 10987 RepID=Q72ZR6_BACC1 Length = 352 Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 118/332 (35%), Gaps = 25/332 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLL--EPTETVVEMVAELHRVYSAKNKAYGLF-S 58 +++I ++ H + + L + E + +V + + + +F + Sbjct: 3 NIEIKRVIAHHMDLGATKPTFLNNVIDISQEEMQDVIVFFGNHVKKALTTAQLKTCVFKN 62 Query: 59 EESELAQTLRLQRQGEED---FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV-- 113 E+ E+ + + + + D F+ +R T +L + + ++F HY + Sbjct: 63 EDDEVYKYCKELAEDQSDDKLFVRVTRRMTIKLFYNMKRTSSTSSATLIFLHYFNVDSGK 122 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDI----NHADIVARIDLTEWETNPESTRYLTF 169 +YL + + + ++ + + A I L E ES Y+ Sbjct: 123 DYLGILKMDPNDGIELDPERVVFKVRKHMLPNVKERLHKSAFIKLDEKLFAEESHLYV-L 181 Query: 170 LKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 K + ++ FF++ FL A E + K AV + ++ + ++V Sbjct: 182 DKQQKMDGISKFFLEAFLNAKEVNSDKKTTAFFNTAVMEVARSEKVPNMFA--IAKKVSD 239 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEE-------SFPADRSTLRQ 281 E + L+ + + E F +F ++++ F ++ Sbjct: 240 SMTEGKYIKVDSMLEEVLHDFIPGEEDRF-DFIERVKQQMKKKNEDVQFEFTVEKEK-EA 297 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPATDT 313 ++ + + F ++LLG +F+D D Sbjct: 298 ISFLHNDDKSIQLRFKSILLGTDVFYDEEEDE 329 >UniRef50_C9KKJ2 Putative uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKJ2_9FIRM Length = 333 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 108/336 (32%), Gaps = 36/336 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE-MVAELHRVYSAKNKAYGLFSEES 61 + I + LH L V D+ L +++ ++ + R + +++ G F ++S Sbjct: 2 IIIEKAILHILDFHSG---VTVYSDTELPVKDSIETWLLKHIERAWGSQDAKPGTFYDDS 58 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 + + GE F+ FS+ L D V+ V YL++ L Sbjct: 59 AFLKQIASYDAGELSFIDFSKQIAKTLEDAFTHAEEMPSSDVIVAAVSIDEVPYLVI--L 116 Query: 122 SNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGR---KV 178 + S + ++ + +L+ + F+ + Sbjct: 117 RSNSHIGFTHQVNQTENGIQNEIINHYSIMPNLS------QKIDEFAFVNRKTKEIKTAA 170 Query: 179 ADFFMD----------FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 + +D L S + K + L +A DK V S Sbjct: 171 KKYTLDGNPVIVLPEVLLECSLTPSPKEAMKNLSKAAAKVAESFGQDKV---ATEAAVKS 227 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTLRQLTKF 285 Y E +Q G E++L+ KE+ + + G + +TL+++++ Sbjct: 228 YVAETMQKGTELDLQEAGKEIFHDNPAMQQELDTAIRDAGITEPVQMDLE-ATLKRVSRH 286 Query: 286 AGSGG-GLTINFDAMLLGER--IFW-DPATDTLTIK 317 G+ + I + + TL+I Sbjct: 287 KLKTDTGIELTIPTDYFDNTEFIEFNNNEDGTLSIT 322 >UniRef50_A6TSZ2 Putative uncharacterized protein n=2 Tax=Alkaliphilus RepID=A6TSZ2_ALKMQ Length = 345 Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 124/325 (38%), Gaps = 33/325 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYGLFSE 59 S+ ++ I +H L K E+ L L D E TE + E++ + + + N+ + Sbjct: 6 SVILHSIIVHVLDKTAEEPL---LTDFQQEITEEIHELIEKHIVRSLKDDDNRIAKFITG 62 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + + E F+ S+ L + ++ C Y + +Y+ + Sbjct: 63 PNIVRDSCDQILYHESSFVESSKIIAQHLFRAMKVNANTSSCDLVICSYSVDSQKYVGIL 122 Query: 120 VLSNLSSM-----RVNENLDINPTHYLDINHADIVARI----DLTEWETNPESTRYLTFL 170 + S V++ ++ + + + R+ + +E N E L L Sbjct: 123 KMDYRKSYVHDIEYVDDRFKVSIISH-ETGLPGMAQRLQKCAFIKRYEANDEYD--LVLL 179 Query: 171 KGRVGR----KVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEA-QLDKAERQNVRQ 224 + + VA FF DFL + +++K + + + F + D A R Sbjct: 180 DKQQAKGSEQDVAHFFAQDFLNCNILVDSKDKTKMFRSMTEKFVRNELRQDVAHAATARD 239 Query: 225 QVYSYCNEQLQAGEEIELKSLSKELAGVSEV---SFTEFAAEKGYELEESFPADRSTL-R 280 + ++ N EEI ++ ++ ++ +E ++ E +G+++ F ++ + + Sbjct: 240 VLATHLN----KEEEINVRQFAEAMSDDNEEMKNNYIEHLNNEGFQVT-GFEVNKEWVEK 294 Query: 281 QLTKFAGSGG-GLTINFDAMLLGER 304 +L + A G I + + + Sbjct: 295 KLKRKAIKTDTGFDIRNERDIFNDP 319 >UniRef50_C0ESI1 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESI1_9FIRM Length = 342 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 130/342 (38%), Gaps = 37/342 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE- 60 + I + LH L E +L ++LL+P + + + ++++ S+ + F E Sbjct: 7 IVIRKAILHILDTNRG---ECILSNTLLDPGPDLHDFIRNHIYKIVSSDDTKNCEFDPEY 63 Query: 61 SELAQTLRLQRQ-GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 S + L + E F+ S+A +L + + +LF ++ + YL + Sbjct: 64 SPIYSILETWDESDETSFIETSQAIANKLYVAMGEGLDIPAADLLFVTFQAEGIIYLALL 123 Query: 120 VLSNLSSMR--VNE-------NLDINPTHYL---DINHADIVARIDLTEWETNPESTRYL 167 ++ S + E N DI TH L + I+L+++ +Y Sbjct: 124 KMNYKESYTHEITEIPDNPVINTDIIKTHSLLPSATSRIPEAVVINLSDYHIKLLEKKYE 183 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE-AQLDKAERQNVRQQV 226 + G +++ +FL + K + L + +++ + + D + + + Sbjct: 184 --INGEKAYYLSE---NFLVCRTSIPPKKKLNILTRVINNISNKYDGADLKTKMDTKSA- 237 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVSEVS---FTEFAAEKGYELEESFPADRSTLRQLT 283 ++ + +++ + +L G S F E + + + + ST+++L Sbjct: 238 ---LQKEYVDNKSFDIEEIGNKLFGKSPEKKSEFDEKMEQYDLQYDNFTVTNESTVKKLE 294 Query: 284 K-FAGSGGGLTINFDAMLLGERIFWDPATD-----TLTIKGT 319 K + G+ I+ + ++ TD T+ I+ Sbjct: 295 KQVMVTDSGIEISIPMETYNKLANFEVQTDVTGKSTIIIRNI 336 >UniRef50_D1PP03 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP03_9FIRM Length = 334 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 115/345 (33%), Gaps = 39/345 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 M + INQ+ LH L + L L R L+ T+ A + + + + F + Sbjct: 1 MEVKINQVILHLLDPGASEPL-LSDRPMDLD-TDLFEYFSAVIEKAFVSDEVKNCRFLPD 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 S AQ + +DF+ SR G + +++ +YP G + + V Y V Sbjct: 59 SAFAQ----EMAQNQDFVDLSRRIAGVIFEQMLQYPAIPAGDLAVVDFAGDGVPYYGVLK 114 Query: 121 LS---------NLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLK 171 L+ ++ T AD A ID + R + K Sbjct: 115 LNYRPGYTHHTETMGNGRFSSMVPQRTLLPGTPKADEAALID-----RANGTVRLIE--K 167 Query: 172 GRVGRKVADFFM--DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV------R 223 + DF++ G +E + KA+ + + + EA + E +V Sbjct: 168 KFNLDEKKDFYLSTRVFGCTEAMQEKAKLKAVCETAVAAVKEAYPEPEELDDVPPFDGGT 227 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTLR 280 + I ++ + + F AE G + + + ++ Sbjct: 228 ETAVELMVRNQAVDNTISVEDVRTRMRENYPLAAPKFEAALAETGVQENDRVTVSPARMK 287 Query: 281 QLTKFAGSGG-GLTINFDAMLLG--ERIFW-DPATD--TLTIKGT 319 +L + G+ I A L + + + AT +L IK Sbjct: 288 KLESRSFKTESGIEIKIPAELCNSDDAVEFIHSATGGLSLLIKDV 332 >UniRef50_A5CM71 Putative uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CM71_CLAM3 Length = 345 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 104/341 (30%), Gaps = 27/341 (7%) Query: 2 SLDINQIALHQL---IKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYGL 56 +L ++Q LH++ ++ + + + + E L ++ + Sbjct: 6 ALTLDQTMLHEIPRGRQQASGGQQPLYSSAPTPLNADTDRFIREEMLQPAFAFAREVVAT 65 Query: 57 FSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 S + +R SR + + + + G + + Sbjct: 66 EDYGSPVPDLVRAALNDSTQLADSSRDIADWMHKK--QTNGSSAGVFMAALASSSSGPKF 123 Query: 117 LVAVLSNLSSMRVNENLD----INPTHYLDINHADIVARIDLTEWETNPESTRYLTF-LK 171 ++ + +R+N + +L +R+ E + + + Sbjct: 124 IILKAEHQEGVRLNHQTSGGSVVFEVEHLSELIMGQNSRVYKIALMWVNEDGQLVGLMVD 183 Query: 172 GRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + G AD+F+ FLG A+ Q ++ V F L + +R + Sbjct: 184 KQNGASFADYFLQQFLGCDLTHRAEVQTEAFVKTVTAFINSPLLAEEKRTRYATAAVAVL 243 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG--- 287 +++ + SF E + +F D ++Q G Sbjct: 244 ESPAPQLNPKAF--IAEFMDAEDRDSFAEMLPLQIR--SSTFAKDTRLVKQ--NIGGLKL 297 Query: 288 -SGGGLTINFDAMLL-GERIFWDPATDT---LTIKGTPPNL 323 + G+TI + + + D + + IKGT +L Sbjct: 298 KTSSGVTITASSEAMQNGTVTVDSNANAGPQIVIKGTAESL 338 >UniRef50_C7N1T8 Putative uncharacterized protein n=2 Tax=Coriobacteriaceae RepID=C7N1T8_SLAHD Length = 352 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 114/333 (34%), Gaps = 48/333 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 + IN LH N+ +L + + + ++ ++ + +G+F E+S Sbjct: 1 MKINHAILHVFDFISCVNVFATEEVNLEDKSAK-SYISKHANKALNSLDNKHGVFYEDSM 59 Query: 63 LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY------------ 110 A+ L+ QG+ F+ SR L DEL + AD +L + Sbjct: 60 FAEELQAYAQGQRSFMDMSRKIADYLADELGRQQKADSTDLLIVDFEVPVNGNQGGEATD 119 Query: 111 ---------LAVEYLLVAVLSNLSS----MRVNENLDINPTHYLDI-----NHADIVARI 152 A+ Y + +L + + + + + + I A I Sbjct: 120 EEVDASFEGQAMRYFAILLLDSKQAYMHEVGRGDGGRNDIARHFAILPSPSQKVQSYAVI 179 Query: 153 DL-TEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE 211 DL T T + R + G +AD L S ++K + V+ E Sbjct: 180 DLMTGGVTLSDKKR---LIAGEERFLLAD---GLLQCSMEASSKEAFSAVADVVETVANE 233 Query: 212 AQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV---SFTEFAAEKGYEL 268 + A + +Y E + +L L +E+ F E+AAE+ L Sbjct: 234 YGANSALA---LSRAKAYAAEVAFDDGDFDLDELGREVFDGRSDMMGRFDEYAAEEH--L 288 Query: 269 EESFPADRSTLRQLTK-FAGSGG-GLTINFDAM 299 D++ +++ TK G+ I F A Sbjct: 289 SGKMKLDKAAVQRFTKNHKIRTDTGIEITFPAE 321 >UniRef50_A3DC72 Putative uncharacterized protein n=3 Tax=Clostridium thermocellum RepID=A3DC72_CLOTH Length = 343 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 117/330 (35%), Gaps = 28/330 (8%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEES 61 +++ + +H L K + + L + L+ V + + + + +F + Sbjct: 4 INVKRAIIHVLDKESSEPM---LNEFELDIDGDVRYFLEKHITKALGDDEARKAVFKDGR 60 Query: 62 ELAQTLRLQRQGEED-FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + + + + + D F+ S+ +L + ++ C Y E +A+ Sbjct: 61 NIIKEVCQKIFTDNDYFIEGSQEIARQLFKAMKTNSSISSTDLVICIYEEEDEEN--IAI 118 Query: 121 LSNLSSMRVNENLDINPTH-YLDINHADIVA-----RIDLTEWETNPESTRYLTFL---- 170 L ++ ++ + I DI RI + + T + Sbjct: 119 LKMDYTVSFIHEVEFVDNKFKISIKKQDISLPGVNQRIQKCAFIRAAQGTGDYDLIILDN 178 Query: 171 ---KGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQV 226 K VA FF++ FLGA L++K R + +++ E + + V Sbjct: 179 QISKKNQDEPVAQFFLETFLGADLVLDSKTCTRIFKKETENWIRSK---AKEGETSLEIV 235 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE--KGYELEESFPADRSTL-RQLT 283 + N+ ++ +EI+L S S ++ ++ + + + F D+ + ++L Sbjct: 236 REFVNDAIRNEDEIDLDSFSSKVFSDKTDLKEDYISTMREKGLTSDRFEVDKEWVEKKLG 295 Query: 284 KFAGSGG-GLTINFDAMLLGERIFWDPATD 312 K + + D +R ++ + Sbjct: 296 KIRLKTESDIEVVIDYEQYNDREKFEIVKN 325 >UniRef50_A4E7M9 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E7M9_9ACTN Length = 337 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 114/332 (34%), Gaps = 27/332 (8%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 + IN LH L N V+ L+ V + L R ++ + F+E Sbjct: 4 MKINHAILHILDFDSAVN---VMSQRELDIESRTVRNFVTTHLRRARTSADNKRATFAEN 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY-RYLAVEYLLVA 119 S L+ GE +F+ S+ + EL K A+ VL + + V Sbjct: 61 SAFGGELKGYFFGEREFVDLSQQIAEFISSELTKAEKAESTDVLVADFDDDEDARWFAVM 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARID----LTEWETNPESTRYLTFL--KGR 173 +L + + ++E DI + + + ST + ++ K + Sbjct: 121 LLGSKQAF-MHEVGREEGEVRNDIAR-HYAILPNPSQKVPSYAIVRASTMEIGYVDKKRK 178 Query: 174 VGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 + + D L G++ K + + V++ E + A + E Sbjct: 179 IAGEDRMLIPDGLLQCDTGVSGKEVIDTVTRVVEEVAEEHGANTAVALAKVKAAV---AE 235 Query: 233 QLQAGEEIELKSLSKELAGVSEV-SFTEFAAEKGYELEESFPADRSTLRQLT---KFAGS 288 +++ EE+ + E+ V + AA ++ E P +R + + + Sbjct: 236 KVEDDEELPPWDIVDEVFEDEPVIKESVRAALTEEKVPERVPVERKQVERAAVRNHKIRT 295 Query: 289 GGGLTINFDAMLLGERIFW----DPATDTLTI 316 G+ I+F A +G + + ++I Sbjct: 296 DTGIEISFPAE-MGSNSEYIEFVNEPNGLISI 326 >UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B175_9ENTR Length = 51 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 38/50 (76%), Positives = 42/50 (84%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK 50 MSLDI+Q+ LHQLIKRDEQ LE+VLRDSLLE V EM+ ELHRVYSAK Sbjct: 1 MSLDISQLVLHQLIKRDEQTLEVVLRDSLLEIEPVVQEMIEELHRVYSAK 50 >UniRef50_Q210V3 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q210V3_RHOPB Length = 354 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 103/312 (33%), Gaps = 32/312 (10%) Query: 2 SLDINQIALHQLIKRDEQNL--ELVLRDSLLE-PTETVVEMVAELHRVYSAKNKAY---- 54 +L + ++ LH++ KR L+ P E + + A ++ Sbjct: 5 NLVVARVMLHEVFKRRHDGALVSPHYGTQLIALPPEAMDMFKERVVDAMGAVSQCMEMEI 64 Query: 55 GLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVE 114 ES +A L + F+ S +L + GG ++ A Sbjct: 65 AEAGAESAVAIAFSLVGMPDATFVTDSVKFADKL-ANAQQAKNLPGGKLVVFSGTIGATP 123 Query: 115 YLLVAVLSNLS---------SMRVNENLDINPTHYLDINHADIVARIDLTEWETNPE--- 162 VAV+ ++ ++L + P L I + +T ++ P+ Sbjct: 124 RPFVAVIKAEKQSGFRERGTALEFFKDLFLTPASKL----YKIGFFVQMTAGQSLPQGWI 179 Query: 163 STRYLTFLKGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 + Y + + + A +F FLG N+ R F ++ + + Sbjct: 180 AHVYDSQMTTQNREGAAKYFFGTFLGCRIPQNSAHLTRVFFDHTRTFIRALPVEPEVKDD 239 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE-VSFTEFAAEKGYELEE---SFPADRS 277 + +Y+Y ++ I++ + S +T + K + L S Sbjct: 240 LLTSLYTYL--KVDQTPTIQVNNFSTAYLPTEARDDYTNYMQGKNFPLNAVQKDISEVSS 297 Query: 278 TLRQ-LTKFAGS 288 LR+ +F+GS Sbjct: 298 QLRKRRVRFSGS 309 >UniRef50_B4S2T2 Putative uncharacterized protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S2T2_ALTMD Length = 362 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 98/328 (29%), Gaps = 43/328 (13%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPT---ETVVEMVAELHRVYSAKNKAY----G 55 ++IN+IA+HQ+ +RD + + + +KA Sbjct: 6 ININKIAIHQIYQRDSMSEVVEPTKGEDLINFDVAASHTFKTRVTEALGNDSKAVEMAIK 65 Query: 56 LFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 ++S + + RL + DF+ S L E GG V+ Y + + Sbjct: 66 KDGDDSIVCKVDRLISASDPDFIQTSYDIAYDL-AEAQNRRSYTGGIVVVFKGAYGSNKT 124 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------------ETNPE 162 + ++ + D + T + + + T+ +T Sbjct: 125 PFIGIMKAEIYSAYEKKQDPH-TKQITLQYVQEALLTPATKLYKTAGFFLKPDAEKTTDL 183 Query: 163 STRYLTF-----LKGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDK 216 +Y + G+ A +F FLG ++ + DF E + + Sbjct: 184 KDKYTVLVSDTQISQVDGKAAAQYFYSAFLGCGYPESSARTTYKFYEVTKDFIDELSIPQ 243 Query: 217 AERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS------------FTEFAAEK 264 + + + SY + + IE K S E S F+ F + Sbjct: 244 DRKNQLLNALNSYL--KFENNSVIEPKEFSNRYFDKEERSQYKDEIDESGLPFSAFTKDT 301 Query: 265 GYELEESFPADRSTLRQLTKFAGSGGGL 292 + +E + ++ + Sbjct: 302 KF-IESKLQMRKIEFKKQVRITAPAKDF 328 >UniRef50_C9LWV7 Putative uncharacterized protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWV7_9FIRM Length = 332 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 110/337 (32%), Gaps = 33/337 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE-MVAELHRVYSAKNKAYGLFSEES 61 I++ ALH L + +L + L T E ++A + + + +K G F E+S Sbjct: 2 TTIDKAALHIL----DAAGSSLLSAAELPLTGETSEYLLAHIEKSRKSPDKKAGTFYEDS 57 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 E + + GE+DFLAFSR + A + L+V + Sbjct: 58 ECRKEIADYLAGEKDFLAFSRILAESFLRAFSHAAEAASMLLFVLEVHEDERRELIVFLC 117 Query: 122 SNLSSMR---VNEN----LDINPTHYL---DINHADIVARIDLTEWETNPESTRYLTFLK 171 + + V+ +++ L D A +DL+ + + RY + Sbjct: 118 RSHAGFSPAVVDTESGLSAELSACGSLLPSASATMDEFAFVDLSTFAAYVRAKRYS--VD 175 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G + + L + +A+ + D V S+ Sbjct: 176 GNAIFVLPEL---VLECGQAPSAREALKKASDTAKKVAEAYGGDAV---ETAAAVKSFVA 229 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEF---AAEKGYELEESFPADRSTLRQLTKFAGS 288 +L + + + +E+ + ++ E G+ + S L+++ Sbjct: 230 GELAEKDAVNPLEVGREVFKGNPAMQADYERAIEEAGFAAPVEMDKE-SILKKMKNHKLK 288 Query: 289 GG-GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ + + + D ++T+K Sbjct: 289 TDTGIELVIPTDYFDNTEFVEFRRGEDGTISITLKQI 325 >UniRef50_B9CNT1 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CNT1_9ACTN Length = 351 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 113/356 (31%), Gaps = 51/356 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 L +++ LH D+ L+ + + L ++ S +G F+E+ Sbjct: 2 LRVSKAILHVFDFETGTK---HFSDTALDLEDRQTRSYVQRRLRKITSNPESRHGEFAEK 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY---------- 110 S A L+ G+ F+ FS + L K + +L Y Sbjct: 59 SNFAGGLQEYTHGDFGFVEFSAQIAQWFWENLRKVDETEQCDLLVADYLNTDAATSADTA 118 Query: 111 -----------LAVEYLL-VAVLSNLSSMRVNEN------LDINPTHYLDINHADIVARI 152 L + +L + + + L + T D A I Sbjct: 119 DEASGDDDAFDGDTRRLFAIVLLPRKQAFVHDVSATSNEILRQDATLPNPTQKVDTYAVI 178 Query: 153 DL-TEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE 211 DL T + R + G+ +++ F+ S +++ + V + E Sbjct: 179 DLGTGSIDFHDHER---LMAGQARHIMSELFLQ---CSSEASSQEVISEVTGIVQELAEE 232 Query: 212 AQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEF-AAEKGYELEE 270 L+ A + + + E + + + ++ +++ + A L E Sbjct: 233 YNLEPAVEVSRAKAAVAAAVEVHETVDPV---NVGRQVFEDRPEICERYEARAAEKHLPE 289 Query: 271 SFPADRSTLRQLTKF--AGSGGGLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 R ++T+ + G+ I F + + + + +D T++IK Sbjct: 290 EVSVKRGPAGRMTRSHKIRTDTGIEITFPSEMTNHPGFLEFTRESDGRMTISIKNV 345 >UniRef50_A8SBG1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SBG1_9FIRM Length = 329 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 38/342 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 M + I+Q LH L + VL +E T + A + + Sbjct: 1 MEIIIHQAILHVLDTTMDAP---VLSGGPMELTAEKNAYLQNHIEKLLASD----DIRQC 53 Query: 61 SELAQT-LRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 L + + + + +DF+ S G L D + + G + + +L + Sbjct: 54 RPLPDSAFKNELEHNQDFVDLSCRIAGVLFDYMHAHTTIPGADLAVVDFTRDGAPWLGIL 113 Query: 120 VLSNLSSMR-VNENLDINPTHYL---------DINHADIVARIDLTEWETNPESTRYLTF 169 L+ + E ++ P + + + A +DLT++ + Sbjct: 114 KLNYKNGYTHYTETVEGAPVNSIIQQRACLPTQSGKVEEGALVDLTDYS--------MRL 165 Query: 170 LKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSY 229 L+ + F + A+ + + L + Q + AE +V QV Sbjct: 166 LEKKYDIDGHKEFYLSTVVFQYTTAQPEKKKLQAIQEAAVQAVQENYAETPHVEAQVAMM 225 Query: 230 CNEQLQAGE-EIELKSLSKELAGVSE---VSFTEFAAEKGY--ELEESFPADRSTLRQLT 283 Q + ++ ++ + ++L V F ++ + + + +R++ Sbjct: 226 IANQAADNDNQVSIQQVRQQLEEEYPLAAVPFDDYVEKSDVLDSAAQPVTVTPARIRRME 285 Query: 284 KFAGS-GGGLTINFDAMLLGE--RIFW---DPATDTLTIKGT 319 + G+ + LL + + D + +L IK Sbjct: 286 SRSLRTANGIEVKIPTELLNAESEVEFLHADDGSISLLIKNV 327 >UniRef50_D0KGW1 Putative uncharacterized protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KGW1_PECWW Length = 363 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 106/333 (31%), Gaps = 56/333 (16%) Query: 3 LDINQIALHQLIKRDEQNLELVL-------RDSLLEPTETVVEMVAELHRVYSAKNKAYG 55 L I+QIA+HQ+ RDE E R + + +V L SA Sbjct: 6 LTIDQIAIHQIFPRDENRKEKKPVMGTELIRFDKIAMDDFKRRVVDSLGNGSSAVRMQIT 65 Query: 56 LFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF---------- 105 + S +L E++F+ S L + + G V+F Sbjct: 66 DHKKGSTPLLVSKLHGLKEKEFIQTSYEIASNLSAAQTRKGMSGGIVVVFSAFYNPQKLH 125 Query: 106 --------CH--YRYLAVEYLLVAVLSNLSSMRVNENLDINPT-------HYLDINHADI 148 H Y + + L ++ + + + + + +D + Sbjct: 126 LVGIIKADIHSGYEKYQDKNTGLISLKHVEELLLTPSTKLYKSAGFFRREDAVDSKDLNE 185 Query: 149 VARIDLTEWETNPESTRYLTFLKGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDD 207 +++++++ N G+ A +F FLG ++ + + + Sbjct: 186 QWLVEISDYQINKSD-----------GKAAAQYFYQTFLGCDYPESSARTTKKYFELATE 234 Query: 208 FTAEAQLDKAERQNVRQQVY-SYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGY 266 F +E +D+ ER N+ ++ + + E ++ + +F E+ + + Sbjct: 235 FISEMDIDEQERTNLHNALFADLKARKSEQVEPLKFAE--TYMKAEDVDNFREYLEDSDF 292 Query: 267 ELEESFPADRSTLRQLTKFAGSGGGLTINFDAM 299 +E + ++ + F Sbjct: 293 PVE-------AFIKDTQHITSKLKNRRVKFSKD 318 >UniRef50_C9L8B0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C9L8B0_RUMHA Length = 340 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 109/301 (36%), Gaps = 34/301 (11%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEES 61 + I Q +H L D VL D+LL+ + + + ++ S+ F+EES Sbjct: 8 IKIQQAVVHIL---DSALGMPVLSDTLLDCGSDFSDFLKSHIFKIDSSDEIKNCSFTEES 64 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 + + E+FL S+ G L +++ +L Y+ YL + + Sbjct: 65 SVFLLVEEW--NSENFLEVSQKIAGELYTLMSQNIDIPAADLLVVEYQVEQHSYLALLKM 122 Query: 122 SNLSSMRV--------NENLDINPTHYL--DINHADIVARIDLTEWETNPESTRYLTFLK 171 + +S N N I L + A IDL +Y+ ++ Sbjct: 123 NYKTSYTHLTNSDPWGNNNDIIKQKAILPGETQKLTEAALIDLMA-------PQYVRLVE 175 Query: 172 GRVG--RKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE---RQNVRQQ 225 + ++F +FL L++K + + +AV + + D + + + Sbjct: 176 KKYDVNGVKTNYFSQNFLKCKGSLSSKTKLAIVNKAVTEVQKKYFHDSEQFEVQMETKSI 235 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYEL-EESFPA-DRSTLRQLT 283 + +EQ + + + KE + E + Y L E++ + T ++ T Sbjct: 236 LNQEFSEQGGLEVPVVIDKIFKE-HPQMKEEVQEKL--EKYNLTEDTIEPQNPLTTKKFT 292 Query: 284 K 284 K Sbjct: 293 K 293 >UniRef50_C1HX40 Predicted protein n=15 Tax=Neisseria gonorrhoeae RepID=C1HX40_NEIGO Length = 346 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 102/312 (32%), Gaps = 31/312 (9%) Query: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVV-EMVAELHRVYSAKNKAYGL------FS 58 +I H++ ++E + + S + E + NK++G+ + Sbjct: 2 KKIITHRIYPKNENRERVESKISTHLIDLPITARRTLETRLTKALGNKSHGIEMSVVNTA 61 Query: 59 EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 E S +Q + E +F+ S + + A GG +L R + Sbjct: 62 ENSFFQIAAAIQLKEEAEFIEDSAQ-FAHMLTDAQLNTNAPGGILLVLKGRVGDTGKPFL 120 Query: 119 AVLSNL--SSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP--------ESTRYLT 168 V+ R E D +L+ AR+ + +S Y Sbjct: 121 CVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIGFLVAETVRPLEQIQSGNYRA 180 Query: 169 FL-----KGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV 222 FL R A +F FLG S +++ + + +F + L + + Sbjct: 181 FLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQDFFEWTRNFIDNSDLSDDAKLDA 240 Query: 223 RQQVYSYCNEQLQAGEEIELKSLS-KELAGVSEVSFTEFAAEKGYE---LEESFPADRST 278 + + A I + + + L ++TEF EK + + + ++ Sbjct: 241 HEALRVTLK---SAEATISVNNFAQNHLPQEKRTTYTEFMVEKDFPQNAVSKDIEYIKTR 297 Query: 279 LRQLTKFAGSGG 290 LR+ + S G Sbjct: 298 LRKRRSYGFSNG 309 >UniRef50_C1D8S7 Putative uncharacterized protein n=3 Tax=Neisseriaceae RepID=C1D8S7_LARHH Length = 337 Score = 54.6 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 118/313 (37%), Gaps = 28/313 (8%) Query: 1 MSLD---INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYG 55 M + I ++ +H++ L+L E E V ++ E L + S + K Y Sbjct: 1 MQIQDATITRLVVHRVGNATRGEP-LLLSGRATEIDEAVSGLLLEGYLKGIVSERRK-YQ 58 Query: 56 LFSEE----SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR-Y 110 F E +E+ Q R +GE DFLA+S+ L +++P G V + Sbjct: 59 FFHESDLKLNEMYQYSRECFRGELDFLAYSQRVAKHLYAR-SQHPNISAGDVFVIEFAGL 117 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPT-HYLDINHADIVARIDLTEWETNPESTRY--L 167 E + A+ S +R ++ L + + I H + I+ + Y Sbjct: 118 HDGEREMRALGIFKSEIR-DDFLTLTESGQEFAIGH---ASGINPRLIDKGALVLEYGPY 173 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVY 227 + R+G++ + DFL A + A R + + V++ + D + + + Sbjct: 174 AYAVDRLGQQAKFWTEDFLQAMRLPDPAATTRVVAKVVEELSGTLD-DPLTQSRFKDDML 232 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSE--VSFTEFAAEKGY--ELEESFPAD--RSTLRQ 281 + C E Q + +++ +F GY E + PA+ L + Sbjct: 233 TLCQESEQLSAS-DFSRAAEQYLPRETVHQAFDSAVEASGYTFEAAPAVPAESMARRLER 291 Query: 282 LTKFAGSGGGLTI 294 + G G G+++ Sbjct: 292 MLSRYGVGHGISV 304 >UniRef50_A1ZY92 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY92_9SPHI Length = 353 Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 120/343 (34%), Gaps = 43/343 (12%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVY---SAKNKAYGLFSE 59 + + I +H + + ++ + L +LL + +++ +L Y S K A+ F Sbjct: 7 VSLQNIVVHNVGNKSKEEG-VQLSKTLLNLND---DLIQDLLLKYFLSSFKTDAFFQFGH 62 Query: 60 ESEL-----AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVE 114 +S++ + + ++F S L + + + GG H+ V+ Sbjct: 63 DSDVNLNEVYHYVDQIFENPDNFYDQSVNIAKHLYE-ASHHNKIKGGEFYIVHFTDCIVD 121 Query: 115 YLLVAVL------SNLSSMRV---NENLDINPTHYLDINHADIVARIDLTEWETNPESTR 165 L + + + +RV N N +I+ ++IN D I + T E Sbjct: 122 DELADAVGLFKSENKDTYLRVYQQNNNFNIDYADGININKLDKGCLI----FNTEKEHGY 177 Query: 166 YLTFLKGRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFT-----AEAQLDKAER 219 + + A ++ DFL N + L DF E ++++ E+ Sbjct: 178 KVCIVDNLNKSSQAQYWRDDFLRVKPYENNFYHTQNYLTMCKDFVDEVLSEEQEVERPEQ 237 Query: 220 QNVRQQVYSYCNEQLQAGEE------IELKSLSKELAGVSEVSFTEFAAEKGYELE-ESF 272 + + Y E+ E I+ + + E + E EL+ E F Sbjct: 238 IALLNKSVEYFKEKEVFNESEFEQEVIQKPEVVEAFREYKEQYKEQHKEEADVELKFEDF 297 Query: 273 PADRSTLRQLTKFAGSGGGLTINFDAMLLGERIF----WDPAT 311 + +++ K S L NF + G R + +D Sbjct: 298 EISSNAVKETKKKFKSVLKLDKNFSVYIHGNRDYVVKGFDEER 340 >UniRef50_C6X274 Putative uncharacterized protein n=2 Tax=Flavobacteriaceae RepID=C6X274_FLAB3 Length = 338 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 108/305 (35%), Gaps = 35/305 (11%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSE----E 60 +++I +H++ R Q L+L +L+ E + E++ + + Y +SE Sbjct: 2 LSKIIVHKVGNRINQE-SLILSQEVLQLDEEMTELLEDFFLKSFKSEEQYRFYSETYLVN 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV------E 114 + + + + F+ + L D + + P G + ++ + Sbjct: 61 NTVYGAAAEIFEDKAKFIEEAENIAQHLYD-ITENPRVQSGELFIVYFEGEENVDGNKID 119 Query: 115 YLLVAVLSNLSSM-RVNENLDINPTHY---LDINHADIVARIDLTEWETNPESTRYLTFL 170 + + N + ++ + + D A I + ++ ES ++ + Sbjct: 120 SIGIFKTENKNPFLKIFPEGQTFEIEKDYGIGLAKLDKGALI----YNSSKESGYAVSVV 175 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA-----QLDKAERQNVRQQ 225 +F +FL + + + L DF + ++ KA++ + + Sbjct: 176 DNNKNGDADYWFENFLKVKQRDDEYFHTQETLSVYKDFITKQLPQEFEVSKADQADFLNK 235 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSE--VSF----TEFAAEKGYELEESFPADRSTL 279 ++ E+ + + + + E+ SF +++ E + E F + + Sbjct: 236 SINFFKEK----DTFDYEEFTNEVLEDKSVIESFSNFKSDYEQEMQVSISEDFAISEAAV 291 Query: 280 RQLTK 284 ++ ++ Sbjct: 292 KKQSR 296 >UniRef50_B8I0U2 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B8I0U2_CLOCE Length = 338 Score = 50.7 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 115/338 (34%), Gaps = 32/338 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEES 61 + I LH L VL D +E + VE + + + +++ N F E Sbjct: 5 IHIKTAVLHILDTSVNFP---VLSDKEIELSGETVEFLEKHISKIFEDTNLKKAQFIGEV 61 Query: 62 ELAQTL-RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + + ++ F+ +RA D + K G ++ CH+ YL + Sbjct: 62 NTIKDICNALKEDSGRFMEVTRAIGVMTFDFMLKNIDISSGDLICCHFHAGNEPYLALLK 121 Query: 121 LSNLSSM--RVNENLDINPTHYL--------DINHADIVARIDLTEWETNPESTRYLTFL 170 L+ + VN+ + + D D I L E Y + Sbjct: 122 LNYKTGFTHYVNQMEEGAVNSIIRYKTLLPSDGQKVDEAVLISLETDEIKLIEKAYE--I 179 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 G ++++ + + L+ + + + + + + + ++ ++V S Sbjct: 180 NGTKEFYMSNYLIK---CTTDLSDNQKLKIIDKVTQKISKKYYDEDFDKVAKLKKVVS-- 234 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESFP--ADRSTLRQLTKFAG 287 E L+ EI + +++E+ + E+ E + L E ++ ++ Sbjct: 235 -EGLEEKSEIRVDEIAQEVFDTNLAVREEYIQEIQKAGLIEEAIKVPEKLAEKKFKTHKI 293 Query: 288 SGG-GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ INF R I + D ++ IK Sbjct: 294 KTDTGIEINFPLSYYDNRDMIEFANNPDGSISIIIKNV 331 >UniRef50_Q18AC3 Phage protein n=12 Tax=root RepID=Q18AC3_CLOD6 Length = 331 Score = 50.7 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 104/294 (35%), Gaps = 29/294 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSEES 61 + +++ +H L K + + L D + +V + S N +F++ S Sbjct: 1 MIMHKFIIHVLDKNSDTPI---LNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYS 57 Query: 62 E--LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + E FL S+ L D + + + C Y + + + Sbjct: 58 NNLIKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAIL 117 Query: 120 VLSNLSSMR---------VNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 L +S N + N + + I A I L+ +L L Sbjct: 118 KLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLS----GINDEYHLKVL 173 Query: 171 KGRVGRKV--ADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 ++ + F +FL A++ + K + + VD + A D + ++VR + Sbjct: 174 DKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLY 233 Query: 229 YCNEQLQAGEEIELKSLS-KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ 281 E+ + +++ + K + + SF + EKG ESF D+ + + Sbjct: 234 MLREKQK----LDINEFADKAIKDDLKDSFKDHIEEKGI---ESFNIDKKWVEK 280 >UniRef50_UPI000169395D hypothetical protein Plarl_13324 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169395D Length = 351 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 122/356 (34%), Gaps = 36/356 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSL-LEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 +++I+++ H L L P E + + + AK F+ + Sbjct: 3 NIEISKLIAHDLALDKASPKTYQQLMDLSQIPAEVLEFFSSHISNAVIAKQIKVCTFTHK 62 Query: 61 SE--LAQTLRLQRQGEED--FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV--E 114 L + + +D F+ S T L + + G ++F Y L Sbjct: 63 DAAVFLGCLEISQDLADDHLFINNSTNMTQLLFNVMKASSSRSSGTLIFILYNDLDTGLP 122 Query: 115 YLLVAVLSNLSSMRVNENLD--INPTHYLD--INHADIVARIDL--TEWETNPESTRYLT 168 YL + + +++++ + L A I L T WE Sbjct: 123 YLAILKMDPNKAIQIDRTNYKFVVQEDILPSVNERLHKCAFIKLSPTLWEDEFHLK---V 179 Query: 169 FLKGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQ--NVRQQ 225 K +V +V+ +F + FL + ++ KA + + ++ + Q+ + + + + + Sbjct: 180 LDKQQVTGEVSKYFLLSFLESQALIDNKAMTELVSVNLAEYAIQEQIIRTQLEIVDFNAK 239 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSEVS------FTEFAAEKGYELEESFPADRSTL 279 V ++ + +L +L K F + +K + F A++ Sbjct: 240 VDRLLSKGNDVDLDRDLDNLFKTYIAGDADRVNKIDGFKQKLVQKRENVMFEFVAEKRP- 298 Query: 280 RQLTKFAGSGGGLTINFDAMLLGERIF--WDPATD-----TLTIKGTPPNLRDQLQ 328 + FA + I F + ++F + D + IKG L+++ + Sbjct: 299 -TIAMFADPDRLIKIQFPLQDMDTKVFLEYKKEEDGSVTTIIKIKGV--ELKEKFK 351 >UniRef50_Q3XXH4 Putative uncharacterized protein n=1 Tax=Enterococcus faecium DO RepID=Q3XXH4_ENTFC Length = 197 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 16/183 (8%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 M + + + LH + + + + L E + + + + + S+ G +EE Sbjct: 1 MDIYLKKAILHIIDRETGSP--VFSQKELDLTKEYIRDFLQKKIQKISSAQTKTGQLAEE 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 S + ++L++ ++ +F+ S A R D + A V Y V YL + Sbjct: 59 SMIVESLKIAQE---NFVEASEAIVQRWFDIYQESEEAPSADVFVVLYELDTVMYLSLLK 115 Query: 121 LSNLSSMR---------VNENLDINPTHY-LDINHADIVARIDLTEWETNPESTRYLTFL 170 ++ + ++ L +N AD ++LT+W T + ++FL Sbjct: 116 VNYREAYTHFVEADEAGIDNRLILNRAILGAKTQKADEAFAVNLTDW-TYELIEKNMSFL 174 Query: 171 KGR 173 + Sbjct: 175 AKK 177 >UniRef50_B1R015 Putative uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R015_CLOBU Length = 332 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 122/338 (36%), Gaps = 30/338 (8%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE 60 ++ I + H L K VL + + + + ++ + ++ +F ++ Sbjct: 3 TILIKKYITHVLDKNMGIP---VLSSKEQNLDIDINNFLEKNISKMLNDQSVKNAVFLDD 59 Query: 61 SE-LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 S+ ++ ++F + L + + G ++ C + + +L + Sbjct: 60 SKAKLLCEKIMSNEIKNFDLITTEIAMNLFQIMEQDLEISSGDLVCCLFLLNDIMHLALL 119 Query: 120 VLSNLSSMR--VNENLDIN-----PTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 L+ S V+++ + T + D A I+L + +Y Sbjct: 120 KLNYRHSYTHFVDKDRVVQIIKNKTTFINESQKIDEGAIINLKDLSIRLIEKKY------ 173 Query: 173 RVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 ++ ++F FL ++ K + + + D+F + ++ E ++V Sbjct: 174 PKNKECFEYFSKKFLECKTEISNKEKLKIFNKINDEFNKKYFNNEIEEDLKMKKV---IL 230 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESFPADRSTLR---QLTKFAG 287 + + ++++ L++++ +E + E K + + + T++ ++ K Sbjct: 231 DSIDDNSDLKMDELAEKVFSENEEVKNNYINELKNSGIYNTTLIESETIKKSFKMQKIKT 290 Query: 288 SGG-GLTINFDAMLLGERIFWDPATD---TLTIKGTPP 321 G + + FD ++ ++ D ++ +K Sbjct: 291 DSGIEINLPFDIYNDKNKVEFNNNVDGTISIVLKNISK 328 >UniRef50_C4VH46 Fkbp-type peptidyl-prolyl cis-trans isomerase n=41 Tax=Lactobacillales RepID=C4VH46_ENTFA Length = 334 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 99/286 (34%), Gaps = 34/286 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFS 58 M + + + LH + + V + L+ T + + A++ ++ +A+ K G + Sbjct: 1 MDIYLKKAILHIIDRETGTP---VFSEKELDLTTEYIRTYLTAKISKLSTAQTKT-GTLA 56 Query: 59 EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 E S TLR DF+ S+ T D + A +LF Y V L V Sbjct: 57 ENSSFVDTLRGI---PSDFVKKSQEVTQHWYDVYSGSEDAPSADILFILYELDTV--LHV 111 Query: 119 AVLSNLSSMRVNENLDINPTHYLD------------INHADIVARIDLTEWETNPESTRY 166 A++ +D + D +DL RY Sbjct: 112 AMIKLNYKESYTHYVDYEEESVYNKLIINRAILSSKSQKPDEGITVDLDTLAFELLEKRY 171 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDK-AERQNVRQQ 225 G K+ F + + + + + +AV + D+ +V++ Sbjct: 172 -----EFSGEKIWYFSEKVIETQAAPSMEENIKEIKKAVKRIGKKFNEDEFELMASVKEA 226 Query: 226 VYSYCN-----EQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGY 266 VY + Q E++ +++S +LA EV+ ++F + Sbjct: 227 VYDSIEETGTIDNEQIAEQVFKENVSAKLAYQEEVNESKFVDKTPP 272 >UniRef50_C8W7R3 Putative uncharacterized protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7R3_ATOPD Length = 353 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 109/358 (30%), Gaps = 53/358 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 L + + LH S L+ + + + L +V + +G F+ Sbjct: 2 LRVTKAILHVFDFETGTKY---FSQSTLDLEDRQTKSYVQRRLRKVTANPESRHGEFAPT 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY------------ 108 S A L+ G+ +F+ FS ++L + + +L Y Sbjct: 59 SNFAGGLQEYAHGDVEFVEFSCQIAQWFWEQLRRADDVEQCDLLVADYIDTDAGQALASS 118 Query: 109 ------------RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLD------INHADIVA 150 + +L + + N N D D A Sbjct: 119 AVNDEDAQAEAFEGEGRRLFAIVLLPRKQAFIHDVNGSSNEILRQDATLPSPTQKVDSYA 178 Query: 151 RIDLTEWETN-PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFT 209 IDL + + R + G + + F++ S ++ + V D Sbjct: 179 VIDLDTGAIDFHDHDRSVA---GEGKFIIPELFLE---CSSEASSHEVIGEVTVIVQDLA 232 Query: 210 AEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEF-AAEKGYEL 268 E L+ A + + + E + + I+ + K + ++ A EL Sbjct: 233 EEYGLEPAVEVSRAKAAVAEAAEVEEVVDPIK---VGKRIFEERPEIQEKYEAQVVSREL 289 Query: 269 EESFPADRSTLRQLTK-FAGSGG-GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 E P R ++ K G+ I+F + L + + +D T++IK Sbjct: 290 PEEVPVKRGVANRIAKNHKIRTDTGIEISFPSNLTDRPGYLEFSHESDGRITISIKNV 347 >UniRef50_A3WXK2 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXK2_9BRAD Length = 325 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 93/294 (31%), Gaps = 35/294 (11%) Query: 49 AKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY 108 Y F ++ + L + + F S +E A G F++F Sbjct: 28 NSGNRY-KFLADAPVQAQLARISRDKATFQEESEKLATAF-NEAHGGSAAVGAFLIFSLS 85 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLD---------------INPTHYLDINHADIVARID 153 L A+L ++ + D I T + N A I Sbjct: 86 CSSGQ---LFALLKFEDEKVLSYDYDVSRGRSGKPKPTFGEIERTFVQNRNALQKAALIK 142 Query: 154 LTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 L + + + + ++ A +F FL + + ++ + + + Sbjct: 143 L------RKDGNEICVVDRQNPQRPAAYFEQFLLVRRQRTEEELTKTIINVTRNIAQKHK 196 Query: 214 --LDKAERQNVRQQVYSYCNEQLQ-AGEEIE--LKSLSKELAGVSEVSFTEFAAEKGYE- 267 L +N+ Q++Y GE E LKS+ L S V +F A E Sbjct: 197 DVLPPDTMKNLAQRLYDASQSGGSVDGESAENWLKSIFGPLPDDSPV-VKDFKAGLKREG 255 Query: 268 -LEESFPADRSTLR-QLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGT 319 ESF ++ ++ + + G+ + F L + + + IK T Sbjct: 256 MAGESFVLQKNAIQAPRNRRVETASGIKLTFPVGLTSSVVSVNRDKGEIIIKDT 309 >UniRef50_UPI0001972DB1 hypothetical protein ClM62_13142 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001972DB1 Length = 336 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 119/338 (35%), Gaps = 34/338 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNK-AYGLFSEES 61 + + +H L D VL D ++ + + + + ++ + + F E S Sbjct: 6 MIMKLGIVHIL---DSSVGVPVLSDCPIDLSGDLSDFLKAHIEKFTESDDVKHCRFGEGS 62 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 E+ + L E+F+ S+ L D + + + +YL + Sbjct: 63 EVKKLLEQCTP--ENFVETSKRLAELLYDIMNANIDIPPADLAVVVFSASGSDYLAFLKM 120 Query: 122 SNLSSMR-VNENLDINPTHYLDI---------NHADIVARIDLTEWETNPESTRYLTFLK 171 + +S + + ++ + + ++L E +Y Sbjct: 121 NYKTSYTHLTSEKEGKNSNSIILQRALLPGQGQKLSEAFAVNLGTGELLVTEKKY----- 175 Query: 172 GRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 V + +F + +L L+ K++ + +AVD + D + + + Y Sbjct: 176 -EVNGEKRLYFSELYLECHAPLSQKSKLDLVTKAVDQVNRKYYGDDDAERKMEIKNVIY- 233 Query: 231 NEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 E + G ++++SL +++ S +F E + E P + T+++ Sbjct: 234 KELEEEGA-LKVESLREKVFPDSPEMQEAFDEKMEKYNLSYETVQPKNEQTVKKFKSQRL 292 Query: 288 SGG---GLTINFDAMLLGERIFW--DPA-TDTLTIKGT 319 + +TI + +R+ + +P T ++ IK Sbjct: 293 TTDTGIEITIPMEEYQNPDRVEFITNPDGTISVLIKNI 330 >UniRef50_A8RDZ2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDZ2_9FIRM Length = 315 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 110/300 (36%), Gaps = 41/300 (13%) Query: 39 MVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFA 98 ++++L R++ ++NK F + S++ + + + E F S+ R+ +E KY Sbjct: 26 LMSKLKRIFKSQNKRQATF-DNSDIEKWIFDYKTTEATFEETSKRIAQRIFEEKRKYNVF 84 Query: 99 DGGFVLFCHYRYLAVEYLL---------VAVLSNLSSMRVNENLDINPTHYLDINHADIV 149 +FC + + YL+ + + + +S +V ++ L Sbjct: 85 HSSDFIFCEVKVDDIRYLVGIDNANTQKLTHVIHTNSGKVENEFLLHKA--LFSESLLKD 142 Query: 150 ARIDLTEWETN-------PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLL 202 RI + E+ T+ P Y+ F + L + K + + Sbjct: 143 DRIFIIEYATSALQLIETPYHNTYV--------------FEEILQCKAKQSYKETLKIMS 188 Query: 203 QAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAA 262 ++ + + L+ E + E ++ + ++ + +++++ ++ +F Sbjct: 189 ESAEVISERYNLNALETMPALKSAV---VECIKEEDALQAEEIAQQVFRGHTLAQQDFVR 245 Query: 263 EKGYELEESFPAD--RSTLRQLTKFAGSGGGLTINFDAMLLG--ERIFW-DPATDTLTIK 317 + + +S + R + T+ + G+ + LL + + L+I+ Sbjct: 246 DMKSQGVDSMSVENIRPAKSEKTEKIRTDSGIELTIPVDLLNSKNDVEFITEDDGKLSIR 305 >UniRef50_B1BR40 Putative uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR40_CLOPE Length = 337 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 88/257 (34%), Gaps = 14/257 (5%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSE-ES 61 ++I + +H L ++ ++ + L +T + + + Y F E ++ Sbjct: 7 INIKKAVIHIL--ENDGTNPILNENLLELNEDTYKFLYKHIEKTLKDNKIKYARFVEKDN 64 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY---LLV 118 EL + + L S+ +L + ++ + L + Sbjct: 65 ELKDICYNILEDKISLLEGSKRIANQLYSIMRSNNTIPSCDLIIAEILTDIGPFIGILKI 124 Query: 119 AVLSNLSSMRVNENLDINPTHYLDIN--HADIVARIDLTEWETNPESTRYLTFLKGRVGR 176 + N N + I + L + A I ++ + K + Sbjct: 125 DFIENYGHKIENSIISIAQSQGLPKSGQKIQKAAFIRPKKFSREFDLLVLDKMKKVKGEE 184 Query: 177 KVA-DFFM-DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQL 234 + A ++F+ FLG + N + + + + + + D E N+++ V ++L Sbjct: 185 EYAINYFIHQFLGCNLVTNERDMTKNFIDYTEKWIMDNIKDTTEALNIQKLV----KDKL 240 Query: 235 QAGEEIELKSLSKELAG 251 + EI++ +E+ Sbjct: 241 KNDSEIDIYEFVEEIGD 257 >UniRef50_A4BWJ4 Putative uncharacterized protein n=3 Tax=Flavobacteriales RepID=A4BWJ4_9FLAO Length = 350 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 33/301 (10%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE- 62 +I + LH++ + + D + E+ M + L + + ++Y FS ++ Sbjct: 8 EITKCILHKVANKFNSGKNVFSEDLIRFDQESYDLMKSFLLKPFGTLTQSY-RFSHHADV 66 Query: 63 ----LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF----CHYRYLAVE 114 L + E F+ +S+ L ++ G ++ Y+ + E Sbjct: 67 RLNELNNYASEIFKEENSFIEYSKNIVNHLYEQSNSAQIKTGDVLIVLIEGIEYKDVLTE 126 Query: 115 YLLVAVLSNL-----SSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTF 169 + V + N + + N++ D+ + D I ++ + Sbjct: 127 AIGVFKIENKIDFFQTYLDDNKSFDMVVQKGISTKRIDKGCLI-----LNTSDTEGTIVL 181 Query: 170 LKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE---AQLDKAERQNVRQQV 226 + DFL + + + L+ +F+ E +L ++ N Sbjct: 182 SVDNNNYDAQYWIKDFLSIKLADDYNSHTQNYLEMCKEFSEEVIKPELGMQQQGNFLANT 241 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVS--EVSF----TEFAAEKGYELEESFPADRSTLR 280 Y E E ++ + E+ + F F + +F L+ Sbjct: 242 VDYFKE----NEAVDYATFKDEVFEDEKHKEQFDTYKKHFETLNDVLIRNNFDVSGVVLK 297 Query: 281 Q 281 + Sbjct: 298 K 298 >UniRef50_B2TNZ2 Putative uncharacterized protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TNZ2_CLOBB Length = 343 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 108/331 (32%), Gaps = 39/331 (11%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEES 61 ++INQ +H L + + VL + LE E V + + + + + Y F + + Sbjct: 7 ININQAVIHVLDRNATEP---VLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFKQGT 63 Query: 62 EL-AQTLRLQRQG-EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 L +T++ G +++F+ S+ +L + D ++ ++ Sbjct: 64 NLVKETVQGYLNGIDDEFIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGP--MIG 121 Query: 120 VLSNLSSMRVNENLDINPTHYL------------DINHADIVARIDLTEWETNPESTRYL 167 +L + + A I + + Y+ Sbjct: 122 ILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKIEKAAFI--KPYREDNLFNLYV 179 Query: 168 TFLKGRVGRKVA---DFFMDFLGASEGLNAKAQ-NRGLLQAVDDFTAEAQLDKAERQNVR 223 K R ++F+ + S + + + + +++ + ++Q +R Sbjct: 180 LDKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIR 239 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLT 283 + E+ E K + KE + +F + A E+ F D++ + + Sbjct: 240 DSFKNKVIEEDIINIEEVAKEVLKE--PGAADNFKVYMAGS---CEKEFGVDKTYVEKKV 294 Query: 284 KFAGSGGGLTINFDAM--LLGERIFWDPATD 312 K + +N D L + ++ Sbjct: 295 K------KVRLNIDREIDLYISNVAYNDQDK 319 >UniRef50_D2BRL6 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech586 RepID=D2BRL6_DICD5 Length = 335 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 112/329 (34%), Gaps = 25/329 (7%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYGLFSEE-- 60 + ++ LHQ+ R + LVL D T+++ ++ L + S KN+ + Sbjct: 8 VKEVILHQVGNRLREEP-LVLADKCFAITDSISNVILGGYLRGIVSDKNQYVLSHESDMA 66 Query: 61 -SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 +++A + F S+ L A G + + + Sbjct: 67 LNDVAHHASGFFSKKISFEDLSKNLATHLYSSTHHPNIASGDLFVILFDKLKVGD----- 121 Query: 120 VLSNLSSMRVNENLDINPTHYLD--INHADIVARIDLTEWETNP--ESTRYLTFLKGRVG 175 V + + +E+ + +D ++ + I+ + + + R+ Sbjct: 122 VYRSAIGIYKSESKQQYLSARIDGKTQQLEVSSGINPDLIDKGALIVDGSDIIYAIDRLS 181 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 + + DFL A + N ++ ++ E ERQ ++V + C+++ + Sbjct: 182 SRTKYWVDDFLNAKQIPNESTKSAVATGLIEK-VRENIESPVERQEFCREVIALCSDKDK 240 Query: 236 -AGEEIELKSLSKELAGVS--EVSFTEFAAEKGYELEESFPADRSTLR-QLTKFAGS--- 288 GEEI LS++ + KG + +L+ +L + Sbjct: 241 VLGEEIR--ELSEKYVSPDVWDKELERLVERKGLVDTKDISVSARSLQTKLNRLFNRVNL 298 Query: 289 GGGLTINFDAMLLGERIFWDPATDTLTIK 317 G +++ L + + ++ I Sbjct: 299 GNDISLIIPGSFLFSDVEFKLDGKSIKIN 327 >UniRef50_B5F983 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F983_SALA4 Length = 378 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 28/341 (8%) Query: 2 SLDINQIALHQLIKRDEQN-LELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYG-LFS 58 +L+I + +H++ +Q ++ ++++ + + + + L +V S +K Sbjct: 37 NLNITDLIIHRVYLPGQQAHFDVEHSNNIIPLSGKAKQTLEQRLTKVLSKGSKCIEMDIV 96 Query: 59 EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL-L 117 E+ L + L GEE F++ ++ +L + G ++ Y + + Sbjct: 97 EDDPLEKIHTLHDAGEELFVSKTKDIANKL-GKAQTSKKHPEGVLVIVRCSYGITKKIRA 155 Query: 118 VAVLSNLSSMRVNENLD--------INPTHYLDINHADIVARIDLTEWETNPESTRYLTF 169 VA++ + + VA + Y F Sbjct: 156 VAIIKAELHEGFTSTVKDNVATIGYLTNLFLTPEQKLYKVAFFSEKTRMSTLNKNAYEVF 215 Query: 170 LK-----GRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 L + A +F FLG S ++ R + +D+ ER ++ Sbjct: 216 LFDNNLTSKDDSGAAAYFYKAFLGLSISADSSRLTRSFYEITEDYINATSSSLEERIDLS 275 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAGVSE-VSFTEFAAEKGYELEESFPAD----RST 278 + Y + E I ++ V + + F EK + SF D ++ Sbjct: 276 SALRIYI--KAGQSEIIGTNDFAENYMSVEKRDDYIMFCEEKDPVIS-SFKKDDTLIKNR 332 Query: 279 LRQLT-KFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKG 318 ++ T KF+ + + D E I D T+ I G Sbjct: 333 IKNSTFKFSNEVKIIYPSIDGNTPCEIIERDDKYTTVKING 373 >UniRef50_Q11XK8 Putative uncharacterized protein n=2 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XK8_CYTH3 Length = 347 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 115/334 (34%), Gaps = 41/334 (12%) Query: 1 MSLDINQ---IALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF 57 M +++ I H + + ++ + + L E++ E++ + + KNK Y F Sbjct: 1 MQIELANFEKIYTHFVGNKSDEEGITISKTPLQLNDESLKELLLN-YFTHPFKNKEYNHF 59 Query: 58 SEESEL-----AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR--- 109 E++L + S L ++ +K+P GG + H+ Sbjct: 60 HHETDLNLNELYTYCSTIFADPDALYLQSINIAKHLYEQ-SKHPMIKGGELYVVHFNDCV 118 Query: 110 --YLAVEYLLVAVLSNLSSMR----VNENLDINPTHYLDINHADIVARIDLTEWETNPES 163 + + + + + + + +DI D I + + Sbjct: 119 IDGESTDAIGLFKSETKETFLKIFPQGDGYEAVSDKGIDIRKLDKGCFI-----INSEKE 173 Query: 164 TRY-LTFLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEA-----QLDK 216 Y + + A ++ D FL ++ + + F + ++ K Sbjct: 174 NGYKVCVVDQTNKSSDAQYWKDDFLKIVSRNDSFHYTQNYMNMCKSFVTDQMPETFEVSK 233 Query: 217 AERQNVRQQVYSYCNEQLQAGEEIELKSLSKEL--AGVSEVSFTEFAA--EKGYELE--E 270 ++ ++ + +Y + E ++++ + ++ SF E+ ++ +++ + Sbjct: 234 TDQIDLLNRSVNYF----KKNESFDMQAFTNDVIQDEGLIDSFKEYKNKFQEDHQMPMVD 289 Query: 271 SFPADRSTLRQLTKFAGSGGGLTINFDAMLLGER 304 F +++ K S L NF + G++ Sbjct: 290 EFEISTPAVKKYAKVFKSVLKLDRNFHIYIHGDK 323 >UniRef50_C8NIQ7 Putative uncharacterized protein n=2 Tax=Granulicatella RepID=C8NIQ7_9LACT Length = 333 Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 96/295 (32%), Gaps = 24/295 (8%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFSEES 61 + IN+ LH L K L+L + L+ + ++E + +L + G + Sbjct: 1 MLINEAVLHILDKNSGN---LLLSQAPLQLGDPFLIEYITKLVDKIKKVDPHIGQLASSE 57 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 L L FL ++ +L +A LF L ++ Sbjct: 58 PLLGYL---VDEGISFLEKTQQLADKLFALIAPAEEIGPADYLFFTGTSDTGGTLF-GMI 113 Query: 122 SNLSSMRVNENLDINPTHYLDINHADIVARIDLT-----EWETNPESTRYLTFLKGRV-- 174 S +V +D + + + T + + + Y ++ +V Sbjct: 114 RLDYSSKVTHFVDYEGEAVSNTILQNHAILPNATQKPSEAFIVDLSNGNY-HLIEKKVVM 172 Query: 175 GRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 + +F FL + + K Q + + + V + + + QQ + Q Sbjct: 173 EGQKTAYFSEKFLEITVPVTTKEQIKEIKKTVTHIAKKHDEEPYKALATTQQAIFH---Q 229 Query: 234 LQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS 288 L+ +EI+ ++ ++ ++ + E ++ + + K+ Sbjct: 230 LEEQDEIDAAAIFDKVFEEKPLA----REAAQLAITEERVPEKIAVTNVPKYERK 280 >UniRef50_C7M8L8 Putative uncharacterized protein n=3 Tax=Flavobacteria RepID=C7M8L8_CAPOD Length = 352 Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 97/302 (32%), Gaps = 25/302 (8%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE 60 + +I +++H++ + L L + + ++ ++ E + + K + Y + Sbjct: 6 TTNIETLSIHRVGNLSKGEP-LFLSEKPYALNDEIIGLLKEYFFKPFREKEENYFHLVHD 64 Query: 61 SE-----LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGG-FVLFCHYRYLAVE 114 ++ L Q + + E S+ L ++ G +V H YL E Sbjct: 65 TDVEFNELYQLVTPIFEDESSIHEQSKKIAQHLYNQSNHPHIKSGEVYVALLHDSYLDNE 124 Query: 115 YL-LVAVLSNLSSMRVN------ENLDINPTHYLDINHADIVARIDLTEWETNPESTRYL 167 + V + + L++ ++I+ D I + Y Sbjct: 125 KVKAVGIFKSEMRNSFLQFEEQANQLEMIIQEGVNIHRLDKGCII-----FNVNKEDGYK 179 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN---VRQ 224 + +FL ++ + L+ DF + L +++ Sbjct: 180 ILSIDSNRYDTKYWLENFLNVDALIDDNFYTKKYLKFSQDFAKDVILPAEDKKEEVLFMN 239 Query: 225 QVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEE--SFPADRSTLRQL 282 + +Y + E + + + + E + Y++E+ +FP + + Sbjct: 240 RAINYFAKNDDFEETSFMNEVFENPELIPEFKHYKVEKGPKYQIEDVSTFPIVNKAVSDV 299 Query: 283 TK 284 K Sbjct: 300 RK 301 >UniRef50_A2CHE4 Putative isomerase (Fragment) n=1 Tax=Eubacterium hallii RepID=A2CHE4_9FIRM Length = 240 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 71/187 (37%), Gaps = 19/187 (10%) Query: 143 INHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLL 202 + I+L+++ RY + G +++ +FL + K + L Sbjct: 57 TSRIPEAVIINLSDYHIKLLEKRYE--INGEKAYYLSE---NFLICHTNIPPKKKLNILT 111 Query: 203 QAVDDFTAE-AQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS---FT 258 + +++ + + D + + + + ++ + +++ + +L G S F Sbjct: 112 RVINNISNKYDGADLKTKMDTKSALQKEYVDR----KSFDVEEIGNKLFGKSPEKKSEFD 167 Query: 259 EFAAEKGYELEESFPADRSTLRQLTK-FAGSGGGLTINFDAMLLGERIFWDPATD----- 312 E + + + + +T+++L K F + G+ I+ + ++ TD Sbjct: 168 EKMEQYDLQYDNFTVTNENTVKKLEKQFMVTDSGIEISIPMETYNKLANFEVQTDVTGKS 227 Query: 313 TLTIKGT 319 T+ I+ Sbjct: 228 TIIIRNI 234 >UniRef50_Q03L76 Uncharacterized conserved protein n=72 Tax=Streptococcus RepID=Q03L76_STRTD Length = 303 Score = 41.5 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 22/276 (7%) Query: 25 LRDSLLEPTETVVE-MVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRA 83 + +S +E T + E +L +V+S + K G F E+ + D + S Sbjct: 1 MAESPIEITPRLDEYFRKKLSKVFSDEAKR-GYFDTENVFISHIG------NDLMESSVK 53 Query: 84 ATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDI 143 + ++E ++F + EY ++ S+ + +P L Sbjct: 54 ISKLWKEEFVISEDQKTNDLVFIQFDKEGQEYFAFLRIALKDSLVHSLGNSQHPIQ-LSQ 112 Query: 144 NHADIVARIDLTEWETNPESTRYLTFLKG-RVGRKVADFF-MDFLGASEGLNAKAQNRGL 201 N+ A+ N S +Y K + A++F + L + K + + Sbjct: 113 NNLPSAAQTPDEALVINRSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMV 172 Query: 202 LQAVDDFTAEAQLDK-AERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEF 260 D + ++ +++ E +E+ + L+ +L + + F Sbjct: 173 EDTAQKIAENFNQDDFNFQGKMKSAIFNNLEE----DQELSPEKLADQLFDNNLTARLTF 228 Query: 261 AAEKGYELEESFPA----DRSTLRQL--TKFAGSGG 290 E + E +++L K + S G Sbjct: 229 VDELKEAIPEPISVSDIDHSRQIKKLENQKLSLSNG 264 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacter... 350 5e-95 UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root R... 341 2e-92 UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewan... 336 7e-91 UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewan... 334 3e-90 UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gamma... 325 2e-87 UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alterom... 320 6e-86 UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammap... 315 1e-84 UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Altero... 301 2e-80 UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 ... 290 4e-77 UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina R... 290 4e-77 UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteob... 289 8e-77 UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9... 273 6e-72 UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pse... 271 3e-71 UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauer... 269 7e-71 UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Ta... 262 2e-68 UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marino... 260 4e-68 UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine ... 259 1e-67 UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcu... 258 3e-67 UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Morit... 256 7e-67 UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1... 255 2e-66 UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marino... 249 1e-64 UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccha... 249 1e-64 UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2... 248 2e-64 UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriav... 246 8e-64 UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobact... 245 1e-63 UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 T... 243 5e-63 UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reineke... 236 7e-61 UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=... 229 8e-59 UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudom... 227 3e-58 UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocy... 224 3e-57 UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. ... 223 8e-57 UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH... 222 2e-56 UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudom... 221 4e-56 UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chej... 219 1e-55 UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuni... 218 2e-55 UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinom... 211 3e-53 UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacte... 194 5e-48 UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinob... 184 4e-45 UniRef50_B2Q671 Putative uncharacterized protein n=2 Tax=Provide... 171 4e-41 UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escheri... 166 1e-39 UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax... 165 2e-39 UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis... 164 5e-39 UniRef50_D1PP03 Putative uncharacterized protein n=1 Tax=Subdoli... 163 9e-39 UniRef50_C9KKJ2 Putative uncharacterized protein n=1 Tax=Mitsuok... 160 5e-38 UniRef50_A8SBG1 Putative uncharacterized protein n=2 Tax=Faecali... 157 6e-37 UniRef50_B9CNT1 Putative uncharacterized protein n=1 Tax=Atopobi... 155 2e-36 UniRef50_C0ESI1 Putative uncharacterized protein n=1 Tax=Eubacte... 154 5e-36 UniRef50_C8W7R3 Putative uncharacterized protein n=1 Tax=Atopobi... 149 1e-34 UniRef50_UPI0001972DB1 hypothetical protein ClM62_13142 n=1 Tax=... 148 2e-34 UniRef50_C9LWV7 Putative uncharacterized protein n=1 Tax=Selenom... 146 8e-34 UniRef50_A5CM71 Putative uncharacterized protein n=1 Tax=Claviba... 146 9e-34 UniRef50_C7N1T8 Putative uncharacterized protein n=2 Tax=Corioba... 145 2e-33 UniRef50_B8I0U2 Putative uncharacterized protein n=2 Tax=Clostri... 143 6e-33 UniRef50_C9L8B0 Putative uncharacterized protein n=2 Tax=Clostri... 142 2e-32 UniRef50_A6TSZ2 Putative uncharacterized protein n=2 Tax=Alkalip... 142 2e-32 UniRef50_A3DC72 Putative uncharacterized protein n=3 Tax=Clostri... 142 2e-32 UniRef50_C2HRJ2 Putative uncharacterized protein n=1 Tax=Vibrio ... 139 1e-31 UniRef50_A4E7M9 Putative uncharacterized protein n=3 Tax=Collins... 138 2e-31 UniRef50_B1R015 Putative uncharacterized protein n=2 Tax=Clostri... 137 5e-31 UniRef50_Q72ZR6 Putative uncharacterized protein n=1 Tax=Bacillu... 136 9e-31 UniRef50_Q210V3 Putative uncharacterized protein n=1 Tax=Rhodops... 132 2e-29 UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alterom... 127 4e-28 UniRef50_Q18AC3 Phage protein n=12 Tax=root RepID=Q18AC3_CLOD6 127 5e-28 UniRef50_UPI000169395D hypothetical protein Plarl_13324 n=1 Tax=... 120 8e-26 UniRef50_B4S2T2 Putative uncharacterized protein n=1 Tax=Alterom... 119 1e-25 UniRef50_C4VH46 Fkbp-type peptidyl-prolyl cis-trans isomerase n=... 117 5e-25 UniRef50_C1HX40 Predicted protein n=15 Tax=Neisseria gonorrhoeae... 117 6e-25 UniRef50_A1ZY92 Putative uncharacterized protein n=1 Tax=Microsc... 117 8e-25 UniRef50_C1D8S7 Putative uncharacterized protein n=3 Tax=Neisser... 115 2e-24 UniRef50_D0KGW1 Putative uncharacterized protein n=1 Tax=Pectoba... 114 5e-24 UniRef50_A8RDZ2 Putative uncharacterized protein n=1 Tax=Eubacte... 114 6e-24 UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 ... 112 1e-23 UniRef50_C6X274 Putative uncharacterized protein n=2 Tax=Flavoba... 110 6e-23 UniRef50_A3WXK2 Putative uncharacterized protein n=1 Tax=Nitroba... 110 7e-23 UniRef50_Q3XXH4 Putative uncharacterized protein n=1 Tax=Enteroc... 96 2e-18 UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingo... 90 9e-17 UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syr... 87 8e-16 UniRef50_A6N5K4 Putative uncharacterized protein n=1 Tax=Pseudom... 80 1e-13 UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus... 48 4e-04 Sequences not found previously or not previously below threshold: UniRef50_C0GKS8 Putative uncharacterized protein n=1 Tax=Dethiob... 115 2e-24 UniRef50_C5RFZ5 Putative uncharacterized protein n=1 Tax=Clostri... 111 3e-23 UniRef50_A0PYK9 Conserved protein n=46 Tax=Clostridium RepID=A0P... 105 2e-21 UniRef50_B0M9M1 Putative uncharacterized protein n=3 Tax=Clostri... 102 1e-20 UniRef50_B1MWX9 FKBP-type peptidyl-prolyl cis-trans isomerase (T... 99 2e-19 UniRef50_B1BR40 Putative uncharacterized protein n=1 Tax=Clostri... 95 4e-18 UniRef50_C8NIQ7 Putative uncharacterized protein n=2 Tax=Granuli... 94 9e-18 UniRef50_B2TNZ2 Putative uncharacterized protein n=1 Tax=Clostri... 93 1e-17 UniRef50_D1BLS9 Putative uncharacterized protein n=3 Tax=Veillon... 92 3e-17 UniRef50_Q24LD6 Putative uncharacterized protein n=1 Tax=Clostri... 91 5e-17 UniRef50_A8U7J1 Putative uncharacterized protein n=1 Tax=Carnoba... 88 4e-16 UniRef50_A1JPY3 Putative uncharacterized protein n=2 Tax=Yersini... 88 4e-16 UniRef50_Q8GPS5 Putative uncharacterized protein ORF SG77 n=1 Ta... 87 7e-16 UniRef50_D2EVE6 Putative uncharacterized protein n=1 Tax=Bactero... 85 3e-15 UniRef50_C4FVJ6 Putative uncharacterized protein n=1 Tax=Catonel... 85 3e-15 UniRef50_Q11XK8 Putative uncharacterized protein n=2 Tax=Cytopha... 84 6e-15 UniRef50_A2CHE4 Putative isomerase (Fragment) n=1 Tax=Eubacteriu... 84 8e-15 UniRef50_Q03L76 Uncharacterized conserved protein n=72 Tax=Strep... 80 8e-14 UniRef50_C6XXB3 Putative uncharacterized protein n=3 Tax=Sphingo... 80 1e-13 UniRef50_C7G546 Putative uncharacterized protein n=1 Tax=Rosebur... 74 9e-12 UniRef50_B9Y3W4 Putative uncharacterized protein n=1 Tax=Holdema... 73 1e-11 UniRef50_D2BRL6 Putative uncharacterized protein n=1 Tax=Dickeya... 73 1e-11 UniRef50_A0AG24 Complete genome n=20 Tax=Listeria RepID=A0AG24_L... 73 1e-11 UniRef50_C7M8L8 Putative uncharacterized protein n=3 Tax=Flavoba... 73 2e-11 UniRef50_B5F983 Putative uncharacterized protein n=1 Tax=Salmone... 72 4e-11 UniRef50_A4BWJ4 Putative uncharacterized protein n=3 Tax=Flavoba... 70 1e-10 UniRef50_B0N0D5 Putative uncharacterized protein n=3 Tax=Bacteri... 68 3e-10 UniRef50_B1HVG3 Putative uncharacterized protein n=2 Tax=Bacilla... 67 1e-09 UniRef50_A6H052 Putative uncharacterized protein n=13 Tax=Bacter... 65 3e-09 UniRef50_C9R789 Putative phage associated protein n=1 Tax=Aggreg... 65 3e-09 UniRef50_C2M5X5 Putative uncharacterized protein n=1 Tax=Capnocy... 65 5e-09 UniRef50_C2G2V7 Putative uncharacterized protein n=2 Tax=Sphingo... 64 9e-09 UniRef50_C8NZW1 Putative uncharacterized protein n=1 Tax=Erysipe... 61 5e-08 UniRef50_B2FTI0 Putative uncharacterized protein n=2 Tax=Gammapr... 60 8e-08 UniRef50_C8RXK5 Putative uncharacterized protein n=1 Tax=Rhodoba... 59 2e-07 UniRef50_A3LAW2 Putative uncharacterized protein n=1 Tax=Pseudom... 55 5e-06 UniRef50_A8TFP7 Putative uncharacterized protein n=1 Tax=Methano... 54 6e-06 UniRef50_Q8E2Y9 Putative uncharacterized protein gbs1974 n=1 Tax... 48 6e-04 UniRef50_Q5P8H5 Putative uncharacterized protein n=1 Tax=Aromato... 47 8e-04 UniRef50_UPI000196CFA5 hypothetical protein CATMIT_02249 n=1 Tax... 47 9e-04 UniRef50_Q5LAA0 Putative uncharacterized protein n=1 Tax=Bactero... 44 0.006 >UniRef50_A8GGW3 Nucleoid-associated protein ndpA n=63 Tax=Bacteria RepID=NDPA_SERP5 Length = 336 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 266/335 (79%), Positives = 300/335 (89%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 MSLDI+QIALHQL+KRDEQ L++VLRDSLL V EM+ ELHRVYSAK+KAYGLF+E Sbjct: 1 MSLDIDQIALHQLVKRDEQTLDVVLRDSLLPTNAAVEEMMEELHRVYSAKSKAYGLFNEG 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 SELA LR R+ ++DFLAFSRAATGRLRDELAKYPFA+GG VLF YRYLAVEYLL+AV Sbjct: 61 SELADALRTCRKEDKDFLAFSRAATGRLRDELAKYPFAEGGVVLFGQYRYLAVEYLLIAV 120 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L++ +S RVNE LDIN THYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV+D Sbjct: 121 LNSRNSSRVNEELDINTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVSD 180 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 FFMDFL A+EGL+ KAQNRGLLQAVDD+ A+AQLDK ERQ+VRQQVYSYCNEQLQAGEEI Sbjct: 181 FFMDFLAAAEGLDTKAQNRGLLQAVDDYCADAQLDKNERQSVRQQVYSYCNEQLQAGEEI 240 Query: 241 ELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML 300 EL+ LSKE+A V E F +F++E+GY+LE+SFPADR TLRQLTKFAGSGGG+++NFDAML Sbjct: 241 ELQELSKEIAPVGEKDFLQFSSEQGYQLEDSFPADRGTLRQLTKFAGSGGGISMNFDAML 300 Query: 301 LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LGERIFWD ATDTLTI+GTPPNLRDQLQRR + GN Sbjct: 301 LGERIFWDAATDTLTIRGTPPNLRDQLQRRQNSGN 335 >UniRef50_A6V9R6 Nucleoid-associated protein ndpA n=37 Tax=root RepID=NDPA_PSEA7 Length = 340 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 114/332 (34%), Positives = 191/332 (57%), Gaps = 4/332 (1%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + I +H + K+ + L RD+ L ++ + ++A+L+ Y+AKNKA+G F ES Sbjct: 1 MPIKHAIVHLIEKKPDGTPAMLHARDAELGDSQAIENLLADLNESYNAKNKAWGFFQGES 60 Query: 62 ---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + L +G+ DF+ FSR A L+ + + + GG +LF HY+ +YL + Sbjct: 61 GAYPFSGWLGDYLEGDRDFVGFSREAVEHLQKLMEESNLSTGGHILFAHYQQGMTDYLAI 120 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKV 178 A+L + + VNE+L++ P+ +LD+ + ARI+++EW N +S +Y++F+KG+ G+KV Sbjct: 121 ALLHHSEGVAVNESLEVTPSRHLDLAQLHLAARINISEWRNNKQSKQYISFIKGKGGKKV 180 Query: 179 ADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGE 238 +D+F DF+G EG+++ ++ R LL+A DF + + + + + + Y Q + GE Sbjct: 181 SDYFRDFIGCQEGVDSPSETRTLLKAFSDFVESEDMAEEQAREKTETLVDYATSQARIGE 240 Query: 239 EIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + L +LS+ + +F ++ K Y L PAD+ TL Q +F G GL+I+F+A Sbjct: 241 PMTLDALSELMDDQQPRAFYDYIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 LLG RI +D DTL I P LRDQL+RR Sbjct: 301 HLLGSRIEYDEERDTLRISSLPTQLRDQLKRR 332 >UniRef50_A1S5V8 Nucleoid-associated protein ndpA n=19 Tax=Shewanella RepID=NDPA_SHEAM Length = 342 Score = 336 bits (861), Expect = 7e-91, Method: Composition-based stats. Identities = 154/341 (45%), Positives = 223/341 (65%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 M++ + Q +H++ + E L LR L ++ V M+ ELH+ Y++K K +G F Sbjct: 1 MTIKVEQAIIHEIAQTHEGQLSCRLRPQPLLNSQAVELMLEELHQSYTSKSGKGFGFFGT 60 Query: 60 ESE-------LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 A L+ G F+ F+ A+ L+DEL KY F+ GGF+L Y ++A Sbjct: 61 HGNDGEANPAFANCLKDYLDGGLGFVEFTGVASKLLQDELGKYDFSQGGFLLLACYSHMA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL VA+LS SSM V +++++ ++LD+N+ + ARIDLTEW+ + ES +Y++F++G Sbjct: 121 SDYLFVALLSAKSSMTVLDDMELTQVNHLDLNNIQLAARIDLTEWQADKESRKYISFIRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF A ++L K ERQ R +V+ YC+E Sbjct: 181 RAGRKVADFFLDFMGCVEGINPKAQNKSLMIAVEDFVAGSELTKDERQACRDKVFEYCSE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + AG E+++K L+ ELA SF +FA Y+LEE FP D+STLRQL KF+G+GGG+ Sbjct: 241 RFDAGAEVDIKDLADELADSGMDSFYDFATTGNYDLEEEFPVDKSTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 TI+FD LGER+ +DP +DTL IKG P NL+DQL RR G Sbjct: 301 TISFDGHHLGERVIYDPISDTLLIKGVPANLKDQLHRRLKG 341 >UniRef50_B0TK49 37kDa nucleoid-associated protein n=2 Tax=Shewanella RepID=B0TK49_SHEHH Length = 342 Score = 334 bits (856), Expect = 3e-90, Method: Composition-based stats. Identities = 150/341 (43%), Positives = 220/341 (64%), Gaps = 8/341 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFS- 58 MS+++ Q +H + + E L LR L ++ V M+ ELH+ Y+ K K +G F Sbjct: 1 MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGI 60 Query: 59 ------EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 ++ L R GE F+ FS A L++EL+KY F+ GGF+L Y Y+ Sbjct: 61 SGEDGEANTKFEDALTTYRSGELGFVEFSGIAGKLLQEELSKYDFSTGGFLLLSCYTYMT 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +YL V++L+ SSM V ++++++ +LD+N+ + ARIDLTEW+ +P+S +Y++F++G Sbjct: 121 SDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARIDLTEWQADPDSKKYISFVRG 180 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R GRKVADFF+DF+G EG+N KAQN+ L+ AV+DF ++L K ERQ R++V+ YC E Sbjct: 181 RAGRKVADFFLDFMGCVEGVNIKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE 240 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 + G I++K L+ ELA SF +FA YELEE FP D+ TLRQL KF+G+GGG+ Sbjct: 241 RCDEGASIQIKDLADELADQGVDSFYDFAQGGDYELEEEFPGDKPTLRQLKKFSGTGGGV 300 Query: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 T++FD LGER+ +DP +DT+ IKG P NL+DQL RR G Sbjct: 301 TLSFDGQHLGERVIYDPVSDTIIIKGVPANLKDQLDRRLKG 341 >UniRef50_B6EIV0 Nucleoid-associated protein ndpA n=174 Tax=Gammaproteobacteria RepID=NDPA_ALISL Length = 338 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 187/337 (55%), Positives = 244/337 (72%), Gaps = 2/337 (0%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MSL ++ + LH+L+K ++ LE+ LR+ LLE E +V+ELHRV+++K K +G+F Sbjct: 1 MSLILSNVILHKLVKNEQDELEVCLRNQLLENEEFTEALVSELHRVFNSKAGKGFGIFKT 60 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 ESE L R+ E FL FS + +L+ EL KYPFA+ G ++ Y+ LA EYL VA Sbjct: 61 ESEFGHWLGSVRKNETPFLEFSNKSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 VL + SM+V + L+I+ T YLDI DI ARIDL+ WET+ +S RYLTF+KGRVGRKV+ Sbjct: 121 VLPSNESMKVTDELNISATDYLDIAKMDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVS 180 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 DFF+DFL A G++ K QN+ L+QAV+DF A+ +L+K E+Q R+QVY YCN QLQAGEE Sbjct: 181 DFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLEKEEKQQYRKQVYDYCNGQLQAGEE 240 Query: 240 IELKSLSKELAGVSEVS-FTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA 298 + +K LS EL S F +FA E+GYELEESFP DR+ LR+LTKF G+GGGL++NFDA Sbjct: 241 LTVKELSGELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDA 300 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 MLLGER+F+DP TDTLTIKGTPPNL+DQL RR Sbjct: 301 MLLGERVFYDPETDTLTIKGTPPNLKDQLTRRLGSSE 337 >UniRef50_A0Y6R2 Nucleoid-associated protein NdpA n=3 Tax=Alteromonadales RepID=A0Y6R2_9GAMM Length = 338 Score = 320 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 132/336 (39%), Positives = 217/336 (64%), Gaps = 4/336 (1%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYS-AKNKAYGLFSE 59 M+ D+ ++ +H + K+D+ ++ LR+ + + V + +LH ++ K Y FS Sbjct: 1 MTTDVKKLVVHYVDKKDDDT-QIHLRNDEMIINDKVAVFIEQLHHAFTGKPGKGYCAFSG 59 Query: 60 E--SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 E S +A +++ R E F + A+ L++EL KY F + G+++FCHY+Y+A +Y+L Sbjct: 60 EKNSIVASSMQSYRNNELGFWHLTEQASTVLKEELDKYAFNETGYLVFCHYQYVATDYML 119 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +A+++ + LD+ + +LDI+ + ARIDLT W+T PE RY++F+KGR GRK Sbjct: 120 IAMINIKEHYSMTSELDLAASRHLDISRMQLAARIDLTAWDTQPEDNRYISFIKGRAGRK 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 VADFF+DFLG EG++ K Q++ +L AV+D+ +E Q DK+E+ ++R+QV+ YCN+ + G Sbjct: 180 VADFFLDFLGCEEGVDPKQQSQVMLNAVEDYLSEQQFDKSEKDDLRKQVFDYCNDCVTTG 239 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 EE + LS ++ + F F ++ Y+LEE+FP D+ T+ + KF+G GGG++++F+ Sbjct: 240 EEASVTELSAAISKGDDSPFDSFCKDQSYDLEETFPVDKKTVTSMVKFSGLGGGVSVSFE 299 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 LGER+ ++ ATDTL IKG PPNL+DQLQR Sbjct: 300 RKHLGERVTYNEATDTLVIKGIPPNLKDQLQRFMES 335 >UniRef50_Q65R92 Nucleoid-associated protein ndpA n=34 Tax=Gammaproteobacteria RepID=NDPA_MANSM Length = 355 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 170/355 (47%), Positives = 223/355 (62%), Gaps = 20/355 (5%) Query: 1 MSLDINQIALHQLIKRD--------------------EQNLELVLRDSLLEPTETVVEMV 40 MS+ +NQI LHQ+IK LE VLR LL T + + Sbjct: 1 MSITVNQIVLHQIIKPASANIPANNNNETENGETATQNTQLETVLRQELLPITAEAEQFM 60 Query: 41 AELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADG 100 ELH+ Y K K YG+F E+S AQ+L + E DFL FS A L ELAKY FA+ Sbjct: 61 LELHQAYQNKTKGYGVFQEQSRFAQSLNRLLERETDFLPFSYEAAKLLSSELAKYAFAES 120 Query: 101 GFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN 160 G + C Y +LA +YL +A+L + +S+ V+E L+I+ T YL+IN DI ARI+LT+ N Sbjct: 121 GTFVLCRYNFLATDYLFIALLDSKASVLVDEKLEIHRTQYLNINQFDIAARINLTDLRVN 180 Query: 161 PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQ 220 S RYLTF+KGRVGRK+ DFFMDFLGA EGLN + QN+ LLQAV D+ + +L + Q Sbjct: 181 ANSNRYLTFIKGRVGRKIGDFFMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQ 240 Query: 221 NVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLR 280 V++QV+ YC Q+ AG+EIEL LS+ + +++ F +FAAE+ Y LE + P RS L+ Sbjct: 241 AVKKQVFDYCKGQINAGDEIELTELSETIPTLNQQPFADFAAEQDYGLENNIPPVRSALK 300 Query: 281 QLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 LTKF+GSG G+TI+FDA LL +RI+WD DTLTI G P NL+DQLQR N Sbjct: 301 SLTKFSGSGKGVTISFDAELLDKRIYWDDMQDTLTIHGLPANLKDQLQRLLKNHN 355 >UniRef50_A1SWZ3 37kDa nucleoid-associated protein n=3 Tax=Alteromonadales RepID=A1SWZ3_PSYIN Length = 351 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 146/337 (43%), Positives = 220/337 (65%), Gaps = 8/337 (2%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVY-SAKNKAYGLFSE 59 M++ + I LH L E L+ +R+ L + ++ E + +LHR Y S NKA+ F + Sbjct: 1 MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGD 60 Query: 60 ESE----LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 +++ + L + DF+ FS+ L +EL K+ FA+ G +L Y + A +Y Sbjct: 61 KTDKSPLFREALTDYMSQQLDFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDY 120 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 L +A+L N S+ VNENL++ + +++ + +VARIDLT +P+S RY++F+KGR G Sbjct: 121 LFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLTLLARDPQSNRYISFIKGRAG 180 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 RKV+DFF+DF+GA EG +AK QN+GL++AVD+F L A+++ VR+ + YCNEQL+ Sbjct: 181 RKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK 240 Query: 236 AGEEIELKSLSKELAGVS--EVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 G++IEL LS++L E SF +F +E Y+LE SFP DRS +R+LTK+ G GGG++ Sbjct: 241 QGDDIELSVLSEQLQDSPKLEGSFYDFVSE-DYQLENSFPVDRSVVRKLTKYVGQGGGIS 299 Query: 294 INFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 I+FD LGERIF+D +DTLTI+G PPNLR+QL+R Sbjct: 300 ISFDQKHLGERIFYDANSDTLTIQGIPPNLREQLKRD 336 >UniRef50_Q481E3 37-kD nucleoid-associated bacterial protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481E3_COLP3 Length = 351 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 127/346 (36%), Positives = 199/346 (57%), Gaps = 14/346 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLE-----PTETVVEMVAELHRVYSAKN-KAY 54 MSL IN IALH L K++E E+VLR V V LH +Y+AK KAY Sbjct: 1 MSLIINNIALHFLSKKEETG-EVVLRLGPENAEFAQENAKVTNFVDGLHAIYNAKGSKAY 59 Query: 55 GLF------SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY 108 G F + + + +++F FS A L++E+ KY + G+ + CHY Sbjct: 60 GSFSSMPSEGDSARFVDLMESYLTEQQNFYDFSVQAGNVLKNEIEKYDIEETGYFVICHY 119 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 Y+ YL VAV+ V+ L+I+ +LD N + ARIDL +++ N + RY++ Sbjct: 120 EYMGGRYLFVAVIPVSEHYSVDGELNISAAQHLDTNKLQLAARIDLFDYKDNSQGNRYIS 179 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 F+KGR GRKV+DFF+DFLG EGLN+K Q + L+QAV+D+ + QLD AE+Q R+ + S Sbjct: 180 FVKGRAGRKVSDFFLDFLGCEEGLNSKEQTQTLVQAVEDYVSVNQLDPAEKQKTRKDLLS 239 Query: 229 YCNEQLQAGEEIELKSLSKELAG-VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 YC EQ + +++ L+ + K + +E F +F + Y +EESFP +++ + ++TK++G Sbjct: 240 YCKEQKASSQDVSLQEVGKVIESAGTEQDFYQFCQTQSYPIEESFPHEQAVVNKITKYSG 299 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 G G++++F+ GE + ++P D+L I PPNL++QL Sbjct: 300 YGNGISLSFERSHFGEDVVYNPHNDSLIIYKVPPNLKEQLMALLDS 345 >UniRef50_Q5R0C1 Nucleoid-associated protein n=2 Tax=Idiomarina RepID=Q5R0C1_IDILO Length = 347 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 137/343 (39%), Positives = 209/343 (60%), Gaps = 14/343 (4%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF-- 57 M L I + +HQ + D Q + L L S L + + +++ EL VY++K K Y F Sbjct: 1 MQLRIEESIIHQFYQNDGQ-VGLRLAPSALTEDDQLHDLLVELTDVYTSKPAKGYASFLK 59 Query: 58 ----SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 E + L G+ DF+ FS+ + L ++L Y + GF+L Y++++ Sbjct: 60 DEEEGEPGPFPEHLTSWYDGQLDFVEFSQQSAKLLLEQLQNYNLLEAGFLLVTRYQHIST 119 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 EYLLV L + +N L ++ + LDI + ARIDLTEW+T+PES RY++F+KGR Sbjct: 120 EYLLVCFLPVKEGVTINPELAVDRSSQLDITKVQLAARIDLTEWKTSPESERYISFIKGR 179 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 GRKV+DFF+DFLG +E LN+KA + L+ +V ++ +++L+ +RQ + + Y YC++Q Sbjct: 180 AGRKVSDFFLDFLGCTERLNSKAHTQQLVDSVQEYAKQSELETEQRQALNKAAYEYCDDQ 239 Query: 234 LQAGEEIELKSLSKELAGVSEVSFT------EFAAEKGYELEESFPADRSTLRQLTKFAG 287 + G+ +++K LS++ A V + +FA + EL + FPAD+STLR+L KF G Sbjct: 240 WKQGDTVKIKDLSEQFAEQYPVEKSFESFSKDFAEQNSRELVDDFPADKSTLRKLVKFQG 299 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRR 330 GGG+++ FD LGER+ +D ATDTLTI GTPPNLRDQL+R Sbjct: 300 QGGGVSVGFDHTALGERVHYDAATDTLTINGTPPNLRDQLRRY 342 >UniRef50_B4RYJ6 Nucleoid-associated protein NdpA n=5 Tax=Proteobacteria RepID=B4RYJ6_ALTMD Length = 368 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 208/366 (56%), Gaps = 34/366 (9%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSE 59 MS I+ +H+LI E+ +E + RD+ L T + + +++ ++AK K G F Sbjct: 1 MSALIHHFVVHRLIVNKEEKIEAIPRDNCLAVTPEIELLAHQINHSFNAKPGKGVGHFVS 60 Query: 60 E-----------------------SELAQTLRLQRQGEED--------FLAFSRAATGRL 88 E +E A+ L+ + +++ F AFS +AT RL Sbjct: 61 EVTREAKIENEEGETTTEKSTENVAEFAEGLKQYLEVQKEAGDNVEDAFHAFSVSATQRL 120 Query: 89 RDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADI 148 LA+ + GF++FC Y YLA +YL++A+L+ S + V +LD++ +LD+ + Sbjct: 121 VRTLAETGTVETGFLIFCQYEYLATQYLMIALLNTRSHVEVTNSLDLSAREHLDLAKMQL 180 Query: 149 VARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDF 208 R DLT+W+ PE RY++F+KGR+GRKV+DFFM F+G E ++ K QN+ L+ +VD + Sbjct: 181 AVRFDLTQWDIQPEQQRYVSFIKGRMGRKVSDFFMQFVGCEELVDVKQQNKQLISSVDAY 240 Query: 209 TAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELA--GVSEVSFTEFAAEKGY 266 A LD E+ R++V SY E++ AGE + + L+ L + +F F Sbjct: 241 LASESLDPQEQHQHREEVKSYFKEKIDAGESLSVNELANRLPQNEETSSNFKAFTESLEV 300 Query: 267 ELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQ 326 LE D + L+QL KF G GGG++++F+ L+G+R+F+DPATDTLTI+G PPNL+DQ Sbjct: 301 PLENEIQPDPAALKQLAKFTGQGGGVSVSFERKLMGDRVFYDPATDTLTIRGIPPNLKDQ 360 Query: 327 LQRRTS 332 L R++S Sbjct: 361 LNRQSS 366 >UniRef50_Q6D0T8 Conserved hypothetical phage-related protein n=9 Tax=Enterobacteriaceae RepID=Q6D0T8_ERWCT Length = 335 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 9/330 (2%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 ++++ + +H L K+ + L TE ++ ++ Y+ + K YG F + Sbjct: 5 AIEVKHVVVHILDKQQNGDASERLSPEEGMVTEASQRLINDICAKYAGRTGKGYGYFEGD 64 Query: 61 SELAQTLR---LQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 ++ R +DF S L + + A GG+VLF H E+LL Sbjct: 65 TDNYPMERMAGDYLDDTDDFYRSSCRMMHHLTERSQRENMATGGYVLFAHIEIGNNEHLL 124 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +A++S V ++ +I + YLDI + RIDLT WE+ E RY++FLKG+ Sbjct: 125 IAIVSATIGSTVTDDFNIQDSTYLDIAKLRMAGRIDLTAWESGAE--RYISFLKGQGN-- 180 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 V+++F FLG ++ L AK ++ L + F AE L+ AE+ + + + +AG Sbjct: 181 VSNYFKQFLGCNDVLIAKRESEKLRDTLTAFAAEKNLEGAEKDAFLKGAFEHLQALSKAG 240 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 E + L++ + + + A + L + F D +R L F G + FD Sbjct: 241 EPLSLETFVNAVWPHAPEELSSKLAAEELGLSDGFVPDGRVIRALVSFKGKSKYWELKFD 300 Query: 298 AM-LLGERIFWDPATDTLTIKGTPPNLRDQ 326 I +DP T+ +T++ P RD Sbjct: 301 REGTTSGDIDYDPETNIITLRNVPDEFRDM 330 >UniRef50_Q3KBR4 Putative nucleoid-associated protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KBR4_PSEPF Length = 346 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 79/342 (23%), Positives = 159/342 (46%), Gaps = 11/342 (3%) Query: 3 LDINQIALHQLIKRDEQN----LELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFS 58 +DI + +H ++K E N + + R +L + + + ++ +Y+ + YG F Sbjct: 1 MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFG 60 Query: 59 EE--SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 + + D + FS A + + A + LF Y ++L Sbjct: 61 QGPAHPFPNIMLDYSSEGSDIIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWL 120 Query: 117 LVAVLSNLSSMRVNEN-LDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 L+A+L + ++E LD+N + DI+H ARID+ +W++N + YL+F+K R G Sbjct: 121 LIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIEKWQSNQQP--YLSFIKRRAG 178 Query: 176 R-KVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQL 234 ++ +F + +E +AK ++A++D+ D Q R ++Y++CNE+ Sbjct: 179 ESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERK 238 Query: 235 QAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTI 294 Q + L +LS + F ++ E YE+ E F + +T ++L + + G +++ Sbjct: 239 QEEAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISV 298 Query: 295 NFDA-MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 +FD L E +++D D++ IK P L +++ + Sbjct: 299 SFDVNDLRTETVYYDSDADSIIIKRPPVELVRDMKKALGELD 340 >UniRef50_C4ZLL6 37kDa nucleoid-associated protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZLL6_THASP Length = 338 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 10/335 (2%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEES-- 61 + + LH L++ LVLR++ + + L Y +++ K +G F E+ Sbjct: 8 VTHLILHALVREPGAPSRLVLREAPCALDAATLRLAERLCAQYESRSAKGFGRFEEDEER 67 Query: 62 -ELAQTLRLQRQGEE-DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 LA+ LR E DF A S R++ + +GG ++ R + L VA Sbjct: 68 FPLARWLREHLVDETLDFTALSCQLAERVQAIADEEELEEGGHLVLARIREGEGDSLWVA 127 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +L + + + +L ++D + R+DL W E RYL FL+GR Sbjct: 128 LLGSSDGVAIGGDLAPLDCTHVDFSALHAAGRVDLAGWRRGDE--RYLGFLRGRGKGGA- 184 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F LG S+ + A + + L+ +D F +L A R V ++ + Y + +AG Sbjct: 185 -WFKRVLGCSDVMVALQETKKLVATLDRFVDTERLAPATRDTVLERAHDYLDTLGEAGAP 243 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDA- 298 + + L++E+ + ++ F +R +R L +F+ S + F+ Sbjct: 244 VVFEELAREVFPEQPERLDALLRAEETKIAPGFVPNRRAIRPLVRFSASAENWKLEFERS 303 Query: 299 MLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 L + +D ATDTL + G P L+ L+ G Sbjct: 304 GLHSGAVHYDRATDTLVLSGVPDYLKRMLEEDAKG 338 >UniRef50_Q3A5W5 Putative nucleoid-associated protein NdpA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5W5_PELCD Length = 344 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 10/333 (3%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEE 60 ++I+ +H + K QN +L LR+ L + + E++ L ++Y+ K + YG+F ++ Sbjct: 11 EVEIHNAIVHLVKKERHQNPDLRLREEPLPVDDKLSELITSLRKLYNEKTARGYGVFHQD 70 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 + L+ +L E DF+ FS A L ++ A GG++L Y ++L+ Sbjct: 71 TINYPLSTSLNGHLNNEVDFVEFSHNAMRTLVAKVTGVQLATGGYILLASYNENNADFLI 130 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 VA + + + ++NL++ + ++D+ H +AR+++T W N RYL+F K R G Sbjct: 131 VASIKHRPGLAFDQNLNLTGSVHIDLEHLHEMARVNVTSWLNN--GERYLSFAKRRGGDD 188 Query: 178 -VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQA 236 +D+F +F+G E N+ N+ L+AV F + LD R+ + V++Y +E+ A Sbjct: 189 GFSDYFREFIGCEEFCNSTEMNKITLRAVKAFGDQRNLDAETRRQLHAAVFNYFDEKRLA 248 Query: 237 GEEIELKSLSKELAGVSEVSFTEFAAE--KGYELEESFPADRSTLRQLTKFAGSGGGLTI 294 E + L +LS + +F F E + Y L + F ++ + L F G + I Sbjct: 249 KETVSLAALSHRIDDEQPEAFLTFINENAEEYPLGDGFDPVKNIYKGLKTFVIKDGSVKI 308 Query: 295 NFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 F+ G R+ + +L I+ P+ QL Sbjct: 309 QFNQEDFGTRVILNADQ-SLLIRELNPDFIRQL 340 >UniRef50_A6VYD3 37kDa nucleoid-associated protein n=2 Tax=Marinomonas RepID=A6VYD3_MARMS Length = 342 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 153/343 (44%), Gaps = 14/343 (4%) Query: 3 LDINQIALHQLIKRDEQ-NLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF---- 57 + I+ + +H++ K + + L+ R + + A++ +++ G F Sbjct: 1 MSISNLIVHEIQKHEGERKAILIARPNENPVDGQAEALSAQVTNLFNRSGMNTGRFVNPQ 60 Query: 58 --SEESELAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 E ++L L + + DF F++ L A+GG + F HY Sbjct: 61 GSEEGAQLPALLFKHFKNDTFVDFAGFTKECAAEYLKYLEPVEEAEGGLLWFNHYELHDT 120 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 +L + +L + + +L ++ +++ + RI+LT W+ E RY++F GR Sbjct: 121 HFLYIVMLKRKKGIGLGADLSLSQIEQIEMEKLHMSLRINLTAWQAGDE-GRYISFRFGR 179 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 + +++F F+G E A + R L+ F + ++ V +C + Sbjct: 180 APKFESEYFTQFIGCDEPKVAAKETRKLVDLTAAFCQSEGFPSKQANEFKKVVSEHCQAK 239 Query: 234 LQAGEEIELKSLSKELAG----VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSG 289 Q E + +K ++ ++ F E A +++E+ +++ L++LT+ +GS Sbjct: 240 AQDREPLAIKEIASQVESRFSVEQANKFLEIADSDSFKMEKEIFVEKAALKKLTRLSGSS 299 Query: 290 GGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 LTI+FD+ LL E I +D + TLTIK P +L QLQ ++ Sbjct: 300 RALTISFDSELLAESIVFDADSGTLTIKDLPKSLLKQLQAMSN 342 >UniRef50_A0YFM6 Nucleoid-associated protein NdpA n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFM6_9GAMM Length = 333 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 153/331 (46%), Gaps = 8/331 (2%) Query: 3 LDINQIALHQLIK-RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLF--- 57 + + +H + + + R+ T + +L + + + K YG F Sbjct: 1 MTLKHCIIHSIERATPGTEVSTSFREQENPATGPAYSLFEQLKQSFQRSSQKQYGFFDRE 60 Query: 58 SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 S+++ L +R QG F S+ L+ ++ + A ++ + + L Sbjct: 61 SDDNPLPGWIREHHQGTSSFSRVSQRILEHLQQKMGENDEAFSADLMIAVDSVMDQDQLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + + ++ + +++ +LD+ + Y+D N AR+ + EW +S +Y++ + R + Sbjct: 121 IFWIDHVDASQIDHSLDVVHSRYIDSNKMAYSARVFVDEWL-QEDSQKYMSLITSRGSKP 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 ++D F FLG S G+N + L VD + L + + + R Q+ YC +Q + G Sbjct: 180 ISDAFSGFLGFSTGVNLIEETHEFLSIVDQYAQS--LPEDKVSDHRGQILEYCVDQDKQG 237 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 + + +S++L +F+EF AE+ DRS+L++ ++ G ++I+F Sbjct: 238 APVVFEDISRQLDEGQPSNFSEFVAERQQAPAVEMYTDRSSLKRYVRYFGRDKNMSISFS 297 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQ 328 A + G+ I +D TLTIK P +L+ QL+ Sbjct: 298 ADMFGQEIVYDEVAGTLTIKQIPKSLKQQLK 328 >UniRef50_A1K1V2 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K1V2_AZOSB Length = 339 Score = 258 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 12/335 (3%) Query: 1 MSLD--INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF 57 MS D I Q+ +H+L+K + +V RD L P + +V +L ++ + K +G F Sbjct: 1 MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTF 60 Query: 58 SEESELAQTLRLQRQ----GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 ++ E RL R+ E F+ + LR+ +GG L R AV Sbjct: 61 EDDEEEFPVARLLREFSGDDERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAV 120 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGR 173 ++L +A++ + V+++L+++ +LD++ VARIDLT W E R + FL GR Sbjct: 121 DWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDLTGWRRGDE--RCVAFLSGR 178 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 A F FLG + + A + R L+QA+ DF +LD R + ++ + Y ++ Sbjct: 179 G--PAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDL 236 Query: 234 LQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 +AG +EL +L+ EL + L +F +R L+ L + + S Sbjct: 237 GEAGAPVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWR 296 Query: 294 INFDA-MLLGERIFWDPATDTLTIKGTPPNLRDQL 327 + F+ L + +D +DTL + PP L+ L Sbjct: 297 VEFERAGLRSGAVSYDVVSDTLVLSNLPPYLKQML 331 >UniRef50_A6FIF0 Nucleoid-associated family protein n=1 Tax=Moritella sp. PE36 RepID=A6FIF0_9GAMM Length = 343 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 15/339 (4%) Query: 3 LDINQIALHQLIKRDEQN-LELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 ++I I +H++ K ++Q+ + RD + +L ++ G F Sbjct: 1 MNIENIIVHEVRKEEDQSVATIYARDEENTVDAHAQTLSTQLSGLFRKTGLLTGRFETPE 60 Query: 62 E-------LAQTLRLQRQGE--EDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 L + E+F+AFS AAT + +L + GG++ F HY Y Sbjct: 61 NPDDPQPHFVTLLETHFDEDSFENFVAFSDAATRYFKQKLDGTGASKGGYLWFNHYTYNE 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 +L + +L + + ++ +L ++ LD++ + ARI+LT W + STRY+ F G Sbjct: 121 ENFLSIVLLRKKNGLALSNDLTLDQIEQLDLDKLHMAARINLTAWLSGA-STRYIAFRIG 179 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 R + V ++F F+G E A+A + L+Q + A + ++V+Q V+ CN Sbjct: 180 RGAKDVTEYFAKFVGCEEYTRARADTQNLVQVTKRYCANNNFSDDKSEDVKQFVFERCNT 239 Query: 233 QLQAGEEIELKSLSKELA----GVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS 288 L GE + L+ +S+ L + F E A + L P ++S LR LT+++G Sbjct: 240 WLDEGEPVLLERISELLDSSFTPEVQGRFLEIAQGDPFFLSNEIPIEKSALRGLTRYSGK 299 Query: 289 GGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQL 327 L+++FD+ L+ +F++ + + + I P L++QL Sbjct: 300 TQKLSLSFDSDLINISVFYNESDEEIRITDVPIKLKEQL 338 >UniRef50_B3PB69 Nucleoid-associated protein NdpA superfamily n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PB69_CELJU Length = 342 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 12/341 (3%) Query: 3 LDINQIALHQLIK-RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKN-KAYGLFSEE 60 + + I H+L + R E + R LL + E+ L + K K+YG FS + Sbjct: 1 MALTAIIAHRLYRHRPEDTVTTQARADLLPMNGKLEELAYALKTQFIRKGGKSYGRFSSD 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 + A L+ RQG F +FS+ + L P F+ + A +YL Sbjct: 61 TGEFPFAAWLQDYRQGRLGFASFSQKNLQHFQQLLEAAPSLFDVFLFVIEEQIEAGQYLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + V+ + S + ++ +L + + YLD + ++ A+I+ +W+ S YLT ++ R + Sbjct: 121 LFVVEHESGLYLDADLQLTDSVYLDTANLNLAAKINCADWDAGN-SATYLTLMRSRSDKD 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 AD F G S+ + K + + L+ V++F LD+ + R +V YC EQ +AG Sbjct: 180 FADAFGALTGFSDKYDVKTETKEFLEVVENF--TQTLDEPVARLTRTRVADYCLEQNKAG 237 Query: 238 EEIELKSLSKELAGV----SEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 + + + L+ LA +F F A + E++ F +R + +G L+ Sbjct: 238 KPVAINELAHTLATETKGYEPETFERFVATQKPEIKAEFIPHAGQVRSYVRLSGRTDSLS 297 Query: 294 INFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG 334 ++F + LG I +DP D L IK P L+ QL Sbjct: 298 MSFASDCLGRDIEYDPERDLLMIKSIPTALKKQLLAHLKQH 338 >UniRef50_A1U492 37kDa nucleoid-associated protein n=3 Tax=Marinobacter RepID=A1U492_MARAV Length = 338 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 156/324 (48%), Gaps = 9/324 (2%) Query: 16 RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE---SELAQTLRLQR 71 + Q LV ++L EP + ++ R++++K K YG FS++ + L+ Sbjct: 15 QPGQPARLVAGEALQEPGGDYEALHKQMKRLFNSKPGKKYGRFSDDIGECPFSAWLKDYL 74 Query: 72 QGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNE 131 + ++ F A + G+ ++ L G ++ H E + + +L S+MR + Sbjct: 75 EDKQTFAAMTDRLFGQWQELLTGSQEEFDGHLMIVHDALADAEVVYLFILETDSAMRFDG 134 Query: 132 NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEG 191 + ++ T L ++ ++ RI+L +W S Y+T + GR + F+ + Sbjct: 135 SQKLDATDVLSLSRLNLAVRIELDDWRNANGSENYMTLIHGRGTGDPGELFIRLCAFTNS 194 Query: 192 LNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAG 251 ++ + + L AV+ F + + + VR + Y +C +Q GE +E+++LS L Sbjct: 195 VDVEKETMTFLDAVEAFAKTS--EPEKAGEVRAKAYEFCKDQHALGEPVEIEALSNYLDE 252 Query: 252 VSEVSFTEFAAEKGYELEES--FPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDP 309 F EFA++ EL E+ D +++L + AGSGGG++++F + L+ + +++D Sbjct: 253 SQPQRFKEFASQ-NAELPETGVLHPDHRKVKKLVRIAGSGGGMSVSFSSDLVNQAVYYDR 311 Query: 310 ATDTLTIKGTPPNLRDQLQRRTSG 333 D LTI P LR+QLQR Sbjct: 312 DKDALTITRLPKALREQLQRYLEA 335 >UniRef50_Q21KS0 37kDa nucleoid-associated protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS0_SACD2 Length = 348 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 79/350 (22%), Positives = 160/350 (45%), Gaps = 19/350 (5%) Query: 3 LDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEE 60 + + +I H++ + + + R + + E E+ + K YG FS++ Sbjct: 1 MALTRIIAHRIERTVPTEQARIQTRQTCWSQDGRIEECFREMKQAALKRSGKDYGRFSDD 60 Query: 61 ---SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 LA L + F +F+ A ++ EL K G F +F H + ++L Sbjct: 61 RANHPLASWLEEYHAEKMSFESFTAKAMAHIKLELDKTEVVTGAFFVFAHEKLEEADFLH 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW--ETNPESTRYLTFLKGRVG 175 + + + S ++ L++ + YLD + + A+I+L +W E +T L+ R Sbjct: 121 IYFVQHNSGQYIDAELEMAESFYLDTDGVRLAAKINLDDWLGEDVHRKNNAVTLLRWRGE 180 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 +++++ F +G +E ++ A+ L+ V+++T E L ++ + QV YC EQ + Sbjct: 181 KELSEVFEASIGFAEKIDLTAETEAFLEVVNEYTKE--LPDVVKEYTKAQVVDYCMEQDK 238 Query: 236 AGEEIELKSLSKELAG----------VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKF 285 G+ + +K LS +L F+EF + + D++ LRQ + Sbjct: 239 VGKPVVIKELSTQLIEAPKLPTEESYTPPPPFSEFIKQNKPLAKPELIPDKAKLRQYVRI 298 Query: 286 AGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 +G L+++F + LG+ + +D +D+LTIK PP+L+ +L + + Sbjct: 299 SGRNDFLSMSFASSCLGDTVVYDAESDSLTIKNIPPSLKSRLLKHVRESD 348 >UniRef50_B8F5A2 Conserved hypothetical phage-related protein n=2 Tax=Haemophilus RepID=B8F5A2_HAEPS Length = 323 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 149/325 (45%), Gaps = 11/325 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEES 61 +DI I H L K + +++ + + TET V + +L Y+++ K +G F + Sbjct: 1 MDIKHIIYHILNKEVQGMPQIIPSPNEIPTTETHVNFLTKLTESYASRAGKGFGQFDSDE 60 Query: 62 ELAQTLRLQRQG--EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + R+ R+ +DF A + L ++ + P A GG V H+ +YLL+A Sbjct: 61 DSYPMPRIVREYLVNQDFYAATERMMNTLSTKIQEQPLATGGKVFIVHFAENQNDYLLIA 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVA 179 +LS + + + L + H RI+LT W+ + RY++FLKG+ +A Sbjct: 121 ILSEKMAFSTT-DWQLVEEEVLALEHLKFAGRINLTAWQAGEQ--RYISFLKGQG--DIA 175 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEE 239 +F FLG ++ L A+ + + L++ +++F E +LD ++ ++ + +E E Sbjct: 176 QYFKLFLGCNDVLIAQQETKKLVERLEEFANEQELDVEQKTEFFERAQEHLHEISNNEEP 235 Query: 240 IELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAM 299 ++ + + + + A+ + + F D+ ++++L+ F G ++FD Sbjct: 236 FSAETFANRVWSENPQELKDKLADAENGVADGFIPDKRSIKKLSTFTGKTRHWRLSFDRT 295 Query: 300 L-LGERIFWDPATDTLTIKGTPPNL 323 L I + + + I P +L Sbjct: 296 AVLSGDIELN--SGKIIINNPPESL 318 >UniRef50_Q84ES1 Putative uncharacterized protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84ES1_9BURK Length = 340 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 158/340 (46%), Gaps = 10/340 (2%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEESE 62 +N + +H+L+K +V R + L TE V +++ +H +Y++K +K YG F + Sbjct: 3 TVNHVIVHKLVKEKLGKASVVERAAALTVTEPVKKLILAIHELYASKASKGYGRFEADEV 62 Query: 63 LAQTL----RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA-VEYLL 117 + + F+ S++ L + P A GG+VL A V + L Sbjct: 63 NYPSSAILRKTFIDQSASFVDGSKSLLSVLSAKAGAVPLATGGYVLMAQVTNAAQVTWFL 122 Query: 118 VAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGR 176 VA+++N+ +++ L++ ++D+ + + R++LT+W E RY+ FLK R Sbjct: 123 VAIINNIDGSVIDDKTLEVVDAMHVDLANLRVAGRVNLTDWTNGDEDIRYVGFLKQRG-- 180 Query: 177 KVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQA 236 +VAD+F FLG +E + + + L+ + F LD+ ++ + ++YC+++ + Sbjct: 181 EVADYFKVFLGCNELIADTEETKKLVGVLKKFAKSQGLDQKAEEDFLKSAFNYCDDRNKN 240 Query: 237 GEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINF 296 E + L++LS E E ++ + F D +++ L + T++ Sbjct: 241 DEPLSLEALSNAAWPHEPKKLQEAFVEGEVQISDGFVPDGRSIKALVRLRYKTDYWTVDI 300 Query: 297 DAMLLGERI-FWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 D + L + ++ LT+ P L+ +L R T + Sbjct: 301 DRLALSQGYADYNQKKGELTLLKLPEALKAELDRETKDDD 340 >UniRef50_B3E894 Putative uncharacterized protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E894_GEOLS Length = 371 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 157/365 (43%), Gaps = 33/365 (9%) Query: 2 SLDINQIALHQLIKRDEQNLEL-VLRDSLLEP-TETVVEMVAELHRVYSAKNKA--YGLF 57 + IN++ +H+L+K Q ++ LR ++L+P V+++V + +Y +N + YG F Sbjct: 3 DIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTF 62 Query: 58 SEE---SELAQTLRLQRQ----GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY 110 + + + F+A +R A L + + GG++LF Y Sbjct: 63 RTGDGSGAFPGSFSTYTESATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSS 122 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARID---LTEWETNPESTR-- 165 + ++A++ +R++E L+ LD+N AR++ L+ + PE+ R Sbjct: 123 AQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQAARVNFGKLSAYLAAPEADRQE 182 Query: 166 --YLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 YL+F+ G+ A +F+ LG + G + L++ F R+ + Sbjct: 183 LSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKRFK 242 Query: 224 QQVYSYCNEQLQAGEEIEL---KSLSKELAGVSEVSFTE--------FAAEKGYELEESF 272 + +Y + + + GE ++L + ++++ E + + + + F Sbjct: 243 DNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPVEF 302 Query: 273 PADRSTLRQLTKFAGSGGGLTINFDAMLLG----ERIFWDPATDTLTIKGTPPNLRDQLQ 328 P +++ L++ T S + F+ LG +I++D + +TIK P +L +++ Sbjct: 303 PVNKAALKKHTHIIYSADNWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKIC 362 Query: 329 RRTSG 333 Sbjct: 363 EELEN 367 >UniRef50_A2PW68 Nucleoid-associated protein NdpA, putative n=1 Tax=Vibrio cholerae MZO-3 RepID=A2PW68_VIBCH Length = 351 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 84/347 (24%), Positives = 170/347 (48%), Gaps = 21/347 (6%) Query: 2 SLDINQIALHQLIKR-DEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 +++I + LH LIK +EL R E E+ +++ ++ +++ G F + Sbjct: 3 AMEIKNVILHNLIKEEKSTKVELDDRKKENEVNESALQLSKGINEKFNSTGLNTGHFEKP 62 Query: 61 S-------ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 + +G ++F+ F+++A L+ +L P A GG + F HY + Sbjct: 63 EVDEQLTHFEFLLEKYYNEGFDNFVGFTKSAATYLQKQLMSAPSAKGGHLWFNHYTHAGE 122 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE-TNPESTRYLTFLKG 172 +L V +L MR+++ L++ +D++ + ARI+LT+W+ + +S RY++F G Sbjct: 123 HFLSVVLLREKMVMRIDK-LELEQFDSVDLDKLHMAARINLTKWQNADEQSNRYISFKIG 181 Query: 173 RVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 + +KV D+F F+G E A + L++ ++++ D+A+ + V+ + + E Sbjct: 182 KEAKKVTDYFAKFIGCKEFTQAATDTKALVKCIEEYCRHHLFDEAKTEMVKNKAHDQIVE 241 Query: 233 -QLQAGEEIELKSLS---------KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQL 282 + + + I L +LS +++ + F + + + L D + LR+L Sbjct: 242 WRKEEKQTIHLDTLSTVLDATFLPEDVDEDKKGQFLRISQGEPHNLNNELATDPNALRRL 301 Query: 283 TKFAGSGGGLTINFDAMLLGERIFWDPAT-DTLTIKGTPPNLRDQLQ 328 K++G ++++FDA LLG + ++P LTI P L+DQL+ Sbjct: 302 KKYSGRNKHISLSFDAKLLGNSVVYNPENGGVLTITEIPKTLKDQLE 348 >UniRef50_A4BKP6 Nucleoid-associated protein NdpA n=1 Tax=Reinekea blandensis MED297 RepID=A4BKP6_9GAMM Length = 334 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 145/339 (42%), Gaps = 11/339 (3%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEES 61 + + +HQLI+ L LRD L + + ++ + Y+ +K YG F+EE+ Sbjct: 1 MSLKHAIVHQLIRNTTTTA-LNLRDDELTVDDQLTHLMTQTKTAFYNRSSKQYGQFAEEA 59 Query: 62 ELAQTL-RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + L + + G F + +L+ ++ + G F H + E L Sbjct: 60 GTFKALAQQWQAGSVSFTTLTEQLMKQLQLDVEQQELDIDGHWFFAHETLESSENLWFFH 119 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD 180 L + + + + +D++ +D +DLT N + +YLT G R + Sbjct: 120 LKHKDGLMLTQAMDLSGARLIDFAKLGFGGYVDLTAMAANEQ--KYLTVSFGFGDRSLQS 177 Query: 181 FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI 240 ++F+ + +N L+ V ++ L + + N R++ YC EQ + GE + Sbjct: 178 ALLNFVNFVDTINTAVDTERFLEIVKAYSET--LPQEKGSNYRKKAVEYCTEQDKLGETV 235 Query: 241 ELKSLS----KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINF 296 ++ E+ + + E + F +R++L++ ++ G ++I+F Sbjct: 236 VADEIAVVLKDEVGTDGPQTLASYMEVTQPEAKREFIPNRASLKKFQRYTGKTKEVSISF 295 Query: 297 DAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 +LG+ + +DPA+++LTI P NL QL+ + Sbjct: 296 SNEILGKNVNFDPASESLTITNLPSNLLKQLKSAIGEED 334 >UniRef50_Q7MQ44 Putative uncharacterized protein VV0164 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MQ44_VIBVY Length = 364 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 160/366 (43%), Gaps = 35/366 (9%) Query: 1 MSLDINQIALHQLIKRD-EQNLELVLRDSLLEP-TETVVEMVAELHRVYSAKNKA--YGL 56 M++ I++ +H+LIK E+ L R SLL E+V ++A + +Y KN + YG+ Sbjct: 1 MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGV 60 Query: 57 FSEES-------ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR 109 F ++ + L+ +EDF+ S++ L E FA GG +LF Y Sbjct: 61 FRDDEASGSVPDSFYEYSELEDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYE 120 Query: 110 YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------ETNPE 162 V + L A++ S ++ L + Y+D++ +I+ +++ + + Sbjct: 121 SDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAIKINFSKYNAYQNTDDIERQ 180 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV 222 + YL+F+ + + A +F+ +G G + + + F + KA N+ Sbjct: 181 DSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL 240 Query: 223 RQQVYSYCNEQLQAGEEI---ELKSLSKELAGVS--------EVSFTEFAAEKGYELEES 271 ++ + Y ++ ++ E +++ +++ F + + + Sbjct: 241 KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPE 300 Query: 272 FPADRSTLRQLTKFAGSGGGLTINFDAMLLGE----RIFWDPATDTLTIKGTPPNLRDQL 327 FP +++ L+ +T G L + FD +G R+++D A + IK P +L D+L Sbjct: 301 FPVNKTKLKTMTHLVYKGDDLHLEFDKEDIGGNPSARVYFDGAK--VIIKDLPQDLIDKL 358 Query: 328 QRRTSG 333 ++ +G Sbjct: 359 NQQING 364 >UniRef50_Q6XUL1 Putative uncharacterized protein n=1 Tax=Pseudomonas sp. ND6 RepID=Q6XUL1_9PSED Length = 253 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 5/216 (2%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 + I I +HQ+ K+ + L RD+ L ++ V M+A+L+ Y+AK KA+GLF E Sbjct: 1 MPIRHIIVHQIDKKPDGTPAVLHARDTELGASQAVENMLADLNESYNAKQGKAWGLFHGE 60 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 S ++ L+ +DF AFSR A L+ + + + GG VLF HY+ +YL Sbjct: 61 SGAYPFSRWLKDYLDENQDFTAFSRHAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLT 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 VA+L + + VN+ LD+ P +LD+ + ARI+++EW+ N +S +Y++F+KG+ GRK Sbjct: 121 VALLHHSEGVAVNDTLDVTPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGRK 180 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 V+D+F DF+G EG++A +N Q + F E Sbjct: 181 VSDYFRDFIGCQEGVDAPRRNPHPAQGIQRFRRERG 216 >UniRef50_C2M4T5 Nucleoid-associated protein NdpA n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4T5_CAPGI Length = 346 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 13/339 (3%) Query: 2 SLDINQIALHQLIKRDEQNL-ELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSE 59 +L+I I +HQL+K + + D +L ++ + L Y K++ +G+FS Sbjct: 7 NLEIKNIIIHQLLKEAGNGIVDAKSADHVLNISDREKLFLGNLDEAYYKKSEIIHGIFSG 66 Query: 60 ESE-LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 L +G+ F FS ++ L + A GG+++ C Y L E LLV Sbjct: 67 NFPKFKDLLLEYTEGKNSFYDFSINVMNHYKEILQRTIAATGGYMILCEYTKLKKELLLV 126 Query: 119 AVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPES------TRYLTFLK 171 +++N VNE +L ++ L+++ DI I+LT+W+ YL+F+K Sbjct: 127 LMINNKEGFVVNETDLSLSNIKKLELHKVDIACSINLTDWKAIENEDLTTDRKTYLSFVK 186 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G + ++ +FM F+ + LL+A+D+F DK + + V SYC Sbjct: 187 G--LKDISLYFMQFIDVDNKNTSTESTNRLLRAIDEFAKREGWDKERKIQRQDDVCSYCL 244 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGG 291 +++ +EI L +S + + F + A + + + ++S LR L + Sbjct: 245 DRIDKKQEILLSYISAIMDPDNPEKFQDLATDDEFGVSSVINGNKSKLRLLKRITYKDDN 304 Query: 292 LTINFDAML-LGERIFWDPATDTLTIKGTPPNLRDQLQR 329 L + F+ L L + I +D + LTIK P L+ Q+++ Sbjct: 305 LRLEFNTKLFLDKTIIYDEKNNKLTIKNIPELLKQQIKK 343 >UniRef50_B0RPK1 NdpA protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RPK1_XANCB Length = 393 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 140/357 (39%), Gaps = 33/357 (9%) Query: 8 IALHQLIKRDEQNLELVLR-DSLLEPT-ETVVEMVAELHRVYSAKNKA--YGLFSE---E 60 +H L K N+ V R L+ + V + +L R+ +G F E Sbjct: 37 AVIHSLEKEAHSNISQVRRAPGPLDVSLIQVQSLGQQLSRLVGRDGSTVFWGQFGTNNRE 96 Query: 61 SELAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + + + F+ + A L K + GG+V F Y A +LLV Sbjct: 97 GQFPSAVENLTASSDLATFMTLTEVAMAELVAAAGKELLSTGGYVFFMVYEVNATPFLLV 156 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE-----------TNPESTRYL 167 A++ ++ ++ ++ LD++ ARI+LT +E + E YL Sbjct: 157 AMIKERGALSLSVDMVPTDIQELDLSKLHQAARINLTRYEQALNVGSADVDADEEERTYL 216 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVY 227 F+ +VA +F+D LG +G+++ + + AV F + + K + + VR+ V Sbjct: 217 CFVNKGARNEVAKYFIDALGCEKGVSSNRATKSAIDAVRKFVSSKKEIKPQARKVRRAVI 276 Query: 228 SYCNEQLQAGEEIELK--------SLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTL 279 + L G I + +L EL E +E+ + ++ ESF L Sbjct: 277 DHMAA-LPQGAVITVGTLVAVVRVALGDELVEHVEG-LSEYLNGEEAQVPESFVVSAQYL 334 Query: 280 RQLTKFAGSGGGLTINFDAMLLGE---RIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 + +T+ G ++F+ + E + ++ A +L I+ P +++ Sbjct: 335 KSVTRITAQAEGWRLSFEDTEISETEGPLIYNRADKSLRIRRLPDETAKKIEAALDQ 391 >UniRef50_D0SLQ5 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SLQ5_ACIJU Length = 361 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 151/361 (41%), Gaps = 28/361 (7%) Query: 1 MSLDINQIALHQLIKRDE-QNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFS 58 MS I +H + K N + RD+ + + +V+ ++L YS +G Sbjct: 1 MSFQILNTVIHAVKKEKNSTNATPIYRDNCINNNDPLIVDFTSKLLSAYSNAANTWGDIR 60 Query: 59 E------ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 E +L + + Q F FS ++ + + A GG+VL HY A Sbjct: 61 EAEDNIFHQDLIKWYTPEEQLYYSFYDFSTDVVDQITLAIKEKNTATGGYVLMIHYEQAA 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET-------NPESTR 165 VE+L+V +L + +++ L++ + +++ R++L W+ + R Sbjct: 121 VEFLMVVMLKLETRFGIDDALNMFKSETFSMDNFHESVRMNLKTWQNRSNSVGEDGNPER 180 Query: 166 YLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE-----RQ 220 F+K + +V +F LG + A L++A +D+ A + + E ++ Sbjct: 181 CFAFVKKKNEDEVTRYFRTALGCENYAESAANTNHLIKATEDYVATLKFNCEEEAIAAKR 240 Query: 221 NVRQQVYSYCNEQLQAGEEIELKSLSKELAGV-----SEVSFTEFA--AEKGYELEESFP 273 R +++ +L+ E + LK ++ EL +F ++ Y ++E+F Sbjct: 241 EKRDKLHELLAVKLKNKEPVSLKWVANELFPTPDFDIENNELLKFIKNNQEKYPIDETFK 300 Query: 274 ADRSTLRQLTKFAGS-GGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 + + L + G+ G T+NF L + +F++ + LT+KG + +Q+ R Sbjct: 301 PYKPRVNALGRVRGTLAGDTTVNFPVSELNKTVFYNIQSRELTLKGVDGKMHEQIMRSLG 360 Query: 333 G 333 Sbjct: 361 S 361 >UniRef50_Q4K6S1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K6S1_PSEF5 Length = 376 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 133/372 (35%), Gaps = 41/372 (11%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDS---LLEPTETVVEMVAELHRVYSAKNKA--YGLF 57 + + +H K +L + L + +V ++ + + + YG F Sbjct: 2 ITLKTAIIHSFKKTVHTDLVSDVVKKDVVLDTQNPALESLVEGINGLIGKEGNSVVYGQF 61 Query: 58 SEES---ELAQTLRLQRQ---GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 +++ E +F+ + A +L ++ A GG +L Y Sbjct: 62 ADDGRQGPFPDRFSAYVDVCGDEAEFIELTHLAMDQLVEQARDQTLATGGHILCAQYTSG 121 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------------- 157 A ++ LVA + ++++EN +D+ ARI+ ++ Sbjct: 122 ASDFFLVASIKQRGGIQLDENYVPKAIQEVDLKTVQQAARINFVKFASVTAAACTAAGNT 181 Query: 158 -----ETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA 212 + + YL F+ + +D+F+ LG ++G+ + + + V F Sbjct: 182 VVDAEDAEEVDSTYLCFISRGRDSQASDYFISALGCAKGVASGRATKNAIDYVGRFFRNN 241 Query: 213 QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS-------FTEFAAEKG 265 + K ++ V Y ++L G+ L ++ ++ ++ Sbjct: 242 KELKPFAYKAKEAVVRYLQDRLADGKSARLDAICHAAIQHVPPDLVDEIAGLKDYLNDEK 301 Query: 266 YELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGE----RIFWDPATDTLTIKGTPP 321 + + E F + +L++ T+ G ++ F+ LG+ +++D LT+ Sbjct: 302 HRVPEDFTVNAKSLKEKTRIKGEATSWSLQFERGALGKEATSDVYYDEGRKKLTLSNMNQ 361 Query: 322 NLRDQLQRRTSG 333 L D +++ Sbjct: 362 ELVDLIEKELQA 373 >UniRef50_Q2SBF6 Nucleoid-associated protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBF6_HAHCH Length = 346 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 142/335 (42%), Gaps = 8/335 (2%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPT-ETVVEMVAELHRVYSAK-NKAYGLFS-- 58 + I+++++ L K E + L T + L R+++AK KA+G + Sbjct: 1 MAISELSIQVLEKFSEDDASQTRIPQQLPKTGADNEAVFHTLRRLFAAKTGKAFGRINLH 60 Query: 59 -EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 E L+ +G+ F + +++L P ++L+ H + L Sbjct: 61 AEGQSFGPWLKDWYEGKMSFQQLTEKGLAEFKEKLDVIPLTTQSYLLWIHDQQGDARTLY 120 Query: 118 VAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 + VL + + V L I P +LD RI+L + + +L R RK Sbjct: 121 IFVLESSVTNVVTNELQIEPIEHLDPQAITFALRIELDPLFASNQPDCASVYL-QRNLRK 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAG 237 + + G + ++ + +L ++ F LD ++++ +C++Q + G Sbjct: 180 IGEAGCHSFGFATHVDTVKETEVVLSGLERFAES--LDPKSAAKLKKKAVEFCSDQEKLG 237 Query: 238 EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFD 297 E ++++ LS + + F F E E + D L+QL +FAG G G++++F Sbjct: 238 EAVQIEELSIAIDEQNPDKFAHFMREAIPEAPAALRPDSRKLKQLVRFAGRGSGMSLSFS 297 Query: 298 AMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTS 332 + + E I +D D L I P +L+ QL+R S Sbjct: 298 SEAINESIIYDSEKDALIIMEIPKSLKAQLKRYLS 332 >UniRef50_Q2BN26 Nucleoid-associated protein NdpA n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN26_9GAMM Length = 355 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 141/358 (39%), Gaps = 28/358 (7%) Query: 3 LDINQIALHQLIKRDEQ-NLELVLRDSLLEPTETV-VEMVAELHRVYSAKN-KAYGLFSE 59 + + +A+ +L+K E + R ++ +E + ++ L+ +S ++ +G F+ Sbjct: 1 MQLKHLAIRELVKESEDAPARITERGGIIPTSEPIANQLFETLNAAFSRRSSLTHGSFNH 60 Query: 60 ES----ELAQTLRLQ---RQGEEDFLAFSRAATGRLRDELAK--YPFADGGFVLFCHYRY 110 ++ E DF A + + +L + A GG+VLF Y Sbjct: 61 DNEEGYPFISAFETFVGSEASETDFTALTDKSMAQLAVAINNPSAHTAHGGYVLFALYAS 120 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 EYLL+A++ + + + + +L ++++ ARI+++ ++ +S YL+F+ Sbjct: 121 DRYEYLLIALVRDKAGIGFDNDLHPTEIMEVNLDQLHQGARINISTFKKKQDS--YLSFI 178 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + ++ +F G ++ ++ L++A DF + + ++ V + V SY Sbjct: 179 GSKEKGEITHYFSTAFGCTDVTPSRQSTGELIRAARDFCNQNNMS-DRKEEVVEDVVSYL 237 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVS--------FTEFAAEKGYELEESFPADRSTLRQL 282 Q E L + F FA + Y + + F ST+ + Sbjct: 238 ERQRSDKESANLNEVQNLFDAYIPPEQAETIAGTFGTFANKGPYNVSQEFQPHTSTINRF 297 Query: 283 TKFAGSGGGLTINFDAMLLGE-----RIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN 335 K ++F LG+ I +D + I P + +Q++ + Sbjct: 298 AKLKVKADNWCLDFTKRNLGDINTGKDIEFDEDNGRIIINKLPSKVINQIREALEQED 355 >UniRef50_A6VSV2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSV2_MARMS Length = 349 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 148/352 (42%), Gaps = 26/352 (7%) Query: 3 LDINQIALHQLIKRDEQNL--------ELVLRDSLLEPTETVVEMVAELHRVYSAKNKAY 54 + I + +H +++ + + E +R S ++ +L ++ + + Sbjct: 1 MTIKHVIIHVVMRDESTGVLHKQLRTEENKIRSSEKTSEALAEKLTNDLRNLFGTASLSI 60 Query: 55 GLFSEESE------LAQTLRLQRQGEE---DFLAFSRAATGRLRDELAKYPFAD--GGFV 103 G F + QTL + E DF+ +R + L + GG++ Sbjct: 61 GEFGVRGDNTLKPAFEQTLETFYETPETCSDFVQLTRRFAEQYYAILTEENLTTVKGGYL 120 Query: 104 LFCHYRYLAVEYLLVAVLSNLSSMRVNE-NLDINPTHYLDINHADIVARIDLTEWETNPE 162 +F Y E+L V +L+ + VN +L++ P+ LD+ + A I+LT+W + Sbjct: 121 VFYQYTARGQEWLAVVILNKTEGIDVNSTSLEVVPSEILDLKTLHLAASINLTKWMLG-D 179 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGAS-EGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 TRY+ F GR ++ D+F F+G + A + L AV +F E+ ++ + N Sbjct: 180 DTRYIRFKTGRAA-QIRDYFEKFIGCQRDKYAAVVETHQLKAAVQNFAKESGYNEEKVSN 238 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ 281 + + + E+ + E + LK+L+ + F A + Y L E D++ L++ Sbjct: 239 KVDKTHQFIIERQKDQEPVLLKALANAVFPDLSEEFEREARDT-YNLSEEISIDKNELKK 297 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 K +++F+ L+G++IF + + I P L + + Sbjct: 298 YVKIFVQSKAFSMSFERDLVGKQIFV--VNNEVRISQPPELLINAINEELES 347 >UniRef50_B7I7X8 Nucleoid-associated protein n=4 Tax=Acinetobacter RepID=B7I7X8_ACIB5 Length = 348 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 162/350 (46%), Gaps = 22/350 (6%) Query: 3 LDINQIALHQL-----IKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF 57 + I I +H++ K+ + L ++D+ + E+ A+L +++S+ + G F Sbjct: 1 MSIQHIIVHEIRRVKEEKKSTETLIAKIKDTENDLRSLNGELAAKLLKLFSSSSLMVGQF 60 Query: 58 SEESE------LAQTLRLQRQGEE--DFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR 109 S ++ Q L GE DF+ +R + L + GGF++F ++ Sbjct: 61 SIGNDTEKKPAFEQGLDNFYSGENCLDFVEMTRELAEYFKTFLVENKSITGGFLVFFEFK 120 Query: 110 YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTF 169 L VAV++ ++ +N +L+ LD++ + A I++TEW + S RY+ F Sbjct: 121 GDEHTKLAVAVINKSNATDINPDLNFIAKEILDLDKLHLGATINITEWR-DEFSERYIRF 179 Query: 170 LKGRVGRKVADFFMDFLGAS-EGLNAKAQNRGLLQAVDDFT-AEAQLDKAERQNVRQQVY 227 G+ +V D+F F+G + A + + L +A++ F + +L + + + Sbjct: 180 KNGQS-EQVTDYFQKFIGCEVDKQAANEETKKLKEAIESFATEKLKLPQTAADDYLALAH 238 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 SY N+ + G+++ L +++K + F E+A+E G+ L ++ L+ KF+ Sbjct: 239 SYINDCITKGDDVVLSNVAKHVFPADSDEFFEYASE-GHNLSGILQISKTELKGFKKFSS 297 Query: 288 SGGGLTINFDAMLLGERIFWDPATDTLTIKG--TPPNLRDQLQRRTSGGN 335 S L+I F LL ++I + D L I +L +L+ T+ N Sbjct: 298 SRKDLSITFAKALLNDKIKF--ENDILKIDSSLLSDSLVAELKAATTASN 345 >UniRef50_B0BPC6 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 3 str. JL03 RepID=B0BPC6_ACTPJ Length = 363 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 137/361 (37%), Gaps = 30/361 (8%) Query: 1 MSLDINQIALHQLIKRDEQN---LELVLRDSLLEPTETVVEMVAELHRVYSAKNK----- 52 M++ I +HQ+ K+ L L+ +L + V + K Sbjct: 1 MTIQIKAGIIHQIKKQKNSPSANAVLHLQKTLHSTNNHLSTFVGYAEQQLQKSGKNNSIS 60 Query: 53 -AYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL 111 +G+ + S++ + +Q + D+L S+ L + + G +V YR Sbjct: 61 GGFGIQNTLSKVLASSYFNQQAQIDYLQISKDLAQGLYHFVTQKTATTGEYVPMVFYRKE 120 Query: 112 AVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET------NPEST- 164 V+YLL++++S + ++ + + T +D + + +I+LTE + + Sbjct: 121 EVDYLLISLISLNKYINIDAQGEFSDTSVIDNDALKVGIKINLTEMAAHYAMPNDEQPEV 180 Query: 165 RYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQ 224 Y+ ++ R K+ D+ DF+ E ++ LL+ + ++ A D R V Sbjct: 181 CYIQWI-QRGSSKLPDYIQDFIPVGERIDNSKTTTALLKNIKNYVATTFADPKIRHKVET 239 Query: 225 QVYSYCNEQLQAGEEIELKS--------LSKELAGVSEVSFTEFAAEKGYELEESFPADR 276 V + + E + ++ + F ++ + L+ SF D Sbjct: 240 DVVTLLRTKSDNREAVHIEEDIDVLLNSALTTYGLTDKPQFAQYRQDNNIVLDSSFNVDA 299 Query: 277 STLRQLTKF--AGSGGGLTINFDAMLLGERIFWDPA---TDTLTIKGTPPNLRDQLQRRT 331 + L+ KF + + G+ I D LGE IF + L I+ P QR Sbjct: 300 NKLKPYEKFDLSLANKGILIKGDMGQLGESIFVEEDESHRKYLKIELAPDEFEQITQRYE 359 Query: 332 S 332 S Sbjct: 360 S 360 >UniRef50_B2Q671 Putative uncharacterized protein n=2 Tax=Providencia stuartii ATCC 25827 RepID=B2Q671_PROST Length = 400 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 136/356 (38%), Gaps = 34/356 (9%) Query: 6 NQIALHQLIKRDEQNLELVLRDSLLE---PTETVVEMVAELHRVYSAKNKAYGLFSEES- 61 L N + + LE ++ VV+ + + + + K K++G+ ++ Sbjct: 46 KHALTSTLDLVPSNNGPVFASKTGLEWELDSDDVVQFIGQADKKFMRKRKSHGVIKKDLM 105 Query: 62 --ELAQTLRLQRQGEEDFLAFSRAATGRLRDEL-AKYPFADGGFVLFCHYRYLAVE---- 114 G+ +F +F + ++ E GG +F HY+ + Sbjct: 106 PLNTPNVFLDYLAGKLNFTSFVNSVMKLMQREANEDRAKLVGGNFVFIHYQVDQDKESDG 165 Query: 115 YLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET---NPESTRYLTFLK 171 LL+ ++ S+ + NL ++I+ IDLT ++ N + YL F+ Sbjct: 166 RLLILMVDKKSAFNFDSNLIPEKIPSINIDALRQAVLIDLTLFKASYPNNDGEPYLHFIS 225 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G+ ++FF LG ++ + + A DDF+ + ++ ++ V + + Sbjct: 226 GKSK---SEFFKRALGCDPKVDNNRSIQNVSIAFDDFSEKMKIKALDKIRVNKAIEDLLR 282 Query: 232 EQLQA--GEEIELKSLSKELAGVSE------VSFTEFAAEKGYELEESFPADRSTLRQL- 282 E+ + ++I ++ ++ +A F +F + Y +++ F R + ++ Sbjct: 283 EKAKDPIDKKISIEDIADCVAKTLPKRRDIAKKFVQFVDQGEYLIDDFFEPSRDSNKEFG 342 Query: 283 -TKFAGSGGGLTINF------DAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRT 331 K I F D G +I ++ +TIK RDQ+ R+ Sbjct: 343 QIKIVDEDRDYEITFDIDSISDDKDSGAKIIYNRDDGVITIK-LARTSRDQINRKI 397 >UniRef50_B7NA37 Putative uncharacterized protein n=1 Tax=Escherichia coli UMN026 RepID=B7NA37_ECOLU Length = 391 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 133/350 (38%), Gaps = 33/350 (9%) Query: 13 LIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE---SELAQTLRL 69 L K D + + L + E E + + + +S KNK + + S + L+ Sbjct: 46 LEKNDSRAFDYRLGEVWDLKNEVTSEFITRIEKKFSRKNKFHNFLDSDHNPSSIPTILKK 105 Query: 70 QRQGEEDFLAFSRAATGRLRDEL---AKYPFADGGFVLFCHYRYLAVE---YLLVAVLSN 123 +F+ SRA +L+ ++ GG V+F HY+ E LL+ ++ Sbjct: 106 YINKNNEFIDLSRAIIEKLKHNANNESRVAQLQGGSVVFIHYKSTEPEDLGKLLIVMVDK 165 Query: 124 LSSMRVNEN-LDINPTHYLDINHADIVARIDLTEWETN---PESTRYLTFLKGRVGRKVA 179 S+ + + L + ++ + A DLT +E + + Y+ FL+G+ + Sbjct: 166 QSAYDFDSDKLTPTRLNPINTDALRQAAMFDLTLFEASYPENKGDSYVHFLQGKSK---S 222 Query: 180 DFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQA--- 236 DFF D LG + K + L A+D F ++ L + R + +V S ++ + Sbjct: 223 DFFKDSLGCRHDSDNKRSIQQLFSAIDIFASKNSLGRVLRDTIDNEVKSLLEKKSKDKHG 282 Query: 237 GEEIELKSLSKELAGVSEVS------FTEFAAEKGYELEESFPADRSTLRQLTKF--AGS 288 + ++++ +SK + S F +F G++++ F A + Sbjct: 283 NKSVKIEDISKIIDSCLTDSHKCKGTFVDFVNLNGFQIDPQFEPTPKAAESALTIEVADN 342 Query: 289 GGGLTINFDAMLLGE-----RIFWDPATDTLTIKGTPPNLRDQLQRRTSG 333 + +G+ + + IK D+L+R Sbjct: 343 DNNFKLKIMRGAIGDEKSNKPVILTDNKCEIVIK-LSQANYDELKRYRDS 391 >UniRef50_Q12R01 Nucleoid-associated protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12R01_SHEDO Length = 357 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 138/351 (39%), Gaps = 35/351 (9%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKA-YGLFSEESE 62 I + +H+L K + ++ L L E ++++ +L ++ + +G F + Sbjct: 3 SIKRFVIHELFKDKKPDIAGEL---LNLDNEIILKLAKDLVKIKDGRTAVLWGQFKGSGD 59 Query: 63 LAQTLRL------QRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 L+ + + L + G L +E+ + GG++ F Y L Sbjct: 60 FPLKLKELDAELKEDERSVKLLELTEHTMGALYEEIVHTN-SKGGYICFIEYESFLDCRL 118 Query: 117 LVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWE---TNPESTRYLTFLKGR 173 + A+++N + +++ NL ++D++ I+++ + YL+F+ Sbjct: 119 MAAMITNTAGVKLT-NLKPTKEVHVDLSKLHQAVDINVSGYSKSIKGDFKKNYLSFI--- 174 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 D+F + + + + DF A+ +D +++ R Q+ Y ++ Sbjct: 175 GKGTHTDYFTNAFDCINKITPAKAVNKAPEVLKDFLAQFYVDNTTQKSARAQLVKYLSDN 234 Query: 234 LQAG------EEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 + +EI + +L + SF F+ + YE+ +F A +S + +L K Sbjct: 235 IGKEVHLAKIDEIAVSNLPASCTDEEKQSFIAFSKQDKYEMPATFEARKSNVEKLAKIYY 294 Query: 288 SGGGLTINFDAMLLG---------ERIFWDPATDTLTIKG--TPPNLRDQL 327 + NFD +G + I ++ D + I+G P +R + Sbjct: 295 ATDAFNFNFDLENIGLVGVEADSNKPILFNKDNDDVIIRGRMITPEVRAAI 345 >UniRef50_B4F2P1 Putative phage protein n=1 Tax=Proteus mirabilis HI4320 RepID=B4F2P1_PROMH Length = 364 Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 140/348 (40%), Gaps = 34/348 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTE--TVVEMVAELHRVYSAKNKAYGLFSE 59 SL + ++ +++ + L PT+ V+ ++ + +K++ F + Sbjct: 3 SLQVLNAIAVRITPPEDEQKDWSYTLGALWPTDQQEVITFTTKVDARFHKSSKSHAKFQK 62 Query: 60 ---ESELAQTLRLQRQGEEDFLAFSRA-ATGRLRDELAKYPFADGGFVLFCHYR------ 109 S L + E F F +L + ++G ++F HY+ Sbjct: 63 PYPGSSFPSKLSKFLEKETSFEVFVHDFIQKKLITSARQSRASNGAILVFTHYQLQHEKE 122 Query: 110 ----YLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW---ETNPE 162 + E LLV +L N ++R ENL +NP +D++ AR+D+T + E E Sbjct: 123 DGSVHKDFERLLVLMLKNTDALRFKENLQLNPVDVIDLDKFLQGARVDITRFMSEEVEDE 182 Query: 163 STRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV 222 L F+ R V +F + +GA + ++ K + ++A++ F+ + + +A R+ + Sbjct: 183 DKNNLCFI--RGTGDVRKYFTESIGAEDIISNKTSSEQCIKALEQFSHQKEFGRALREKI 240 Query: 223 RQQVYSYCNEQLQAGEEIELKSLSKELA-------GVSEVSFTEFAAEKGYELEESFPAD 275 ++ N + G+ I L+ + ++ + +F +F E G+E+ E F Sbjct: 241 ESKIQELFN-NCKRGQSITLEKIQTQIDAIIPVDLAEHKNTFVDFVNENGFEVNEEFEVS 299 Query: 276 RSTLRQLTKFAGSGGGLTINFDAMLLG-----ERIFWDPATDTLTIKG 318 S RQ ++ +G I +D T+ + + Sbjct: 300 ASDKRQYEWLDFETNIAKMSVRKHQIGLPGSDRPIIFDTETNEVKLTQ 347 >UniRef50_D1PP03 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP03_9FIRM Length = 334 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 113/346 (32%), Gaps = 41/346 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPT-ETVVEMVAELHRVYSAKNKAYGLFSE 59 M + INQ+ LH L + L L D ++ + A + + + + F Sbjct: 1 MEVKINQVILHLLDPGASEPL---LSDRPMDLDTDLFEYFSAVIEKAFVSDEVKNCRFLP 57 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 +S AQ + +DF+ SR G + +++ +YP G + + V Y V Sbjct: 58 DSAFAQEMAQ----NQDFVDLSRRIAGVIFEQMLQYPAIPAGDLAVVDFAGDGVPYYGVL 113 Query: 120 VLSNLSSMRV---------NENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 L+ ++ T AD A ID + R + Sbjct: 114 KLNYRPGYTHHTETMGNGRFSSMVPQRTLLPGTPKADEAALID-----RANGTVRLIE-- 166 Query: 171 KGRVGRKVADFFM--DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNV------ 222 K + DF++ G +E + KA+ + + + EA + E +V Sbjct: 167 KKFNLDEKKDFYLSTRVFGCTEAMQEKAKLKAVCETAVAAVKEAYPEPEELDDVPPFDGG 226 Query: 223 RQQVYSYCNEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTL 279 + I ++ + + F AE G + + + + Sbjct: 227 TETAVELMVRNQAVDNTISVEDVRTRMRENYPLAAPKFEAALAETGVQENDRVTVSPARM 286 Query: 280 RQLTKFAGSGG-GLTINFDAMLLGER--IFW-DPATD--TLTIKGT 319 ++L + G+ I A L + + AT +L IK Sbjct: 287 KKLESRSFKTESGIEIKIPAELCNSDDAVEFIHSATGGLSLLIKDV 332 >UniRef50_C9KKJ2 Putative uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKJ2_9FIRM Length = 333 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 110/341 (32%), Gaps = 38/341 (11%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE-MVAELHRVYSAKNKAYGLFSEES 61 + I + LH L V D+ L +++ ++ + R + +++ G F ++S Sbjct: 2 IIIEKAILHILDFHSG---VTVYSDTELPVKDSIETWLLKHIERAWGSQDAKPGTFYDDS 58 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 + + GE F+ FS+ L D V+ V YL++ L Sbjct: 59 AFLKQIASYDAGELSFIDFSKQIAKTLEDAFTHAEEMPSSDVIVAAVSIDEVPYLVI--L 116 Query: 122 SNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGR---KV 178 + S + ++ + +L+ + F+ + Sbjct: 117 RSNSHIGFTHQVNQTENGIQNEIINHYSIMPNLS------QKIDEFAFVNRKTKEIKTAA 170 Query: 179 ADFFMD----------FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 + +D L S + K + L +A D + V S Sbjct: 171 KKYTLDGNPVIVLPEVLLECSLTPSPKEAMKNLSKAAAKVAESFGQD---KVATEAAVKS 227 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTLRQLTKF 285 Y E +Q G E++L+ KE+ + + G + +TL+++++ Sbjct: 228 YVAETMQKGTELDLQEAGKEIFHDNPAMQQELDTAIRDAGITEPVQMDLE-ATLKRVSRH 286 Query: 286 AGSGG-GLTINFDAMLLGER--IFWDPATD---TLTIKGTP 320 G+ + I ++ D ++T+K Sbjct: 287 KLKTDTGIELTIPTDYFDNTEFIEFNNNEDGTLSITLKHIS 327 >UniRef50_A8SBG1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SBG1_9FIRM Length = 329 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 114/342 (33%), Gaps = 38/342 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSE 59 M + I+Q LH L + VL +E T + + ++ ++ + Sbjct: 1 MEIIIHQAILHVLDTTMDAP---VLSGGPMELTAEKNAYLQNHIEKLLASDDIRQCRPLP 57 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 +S + + + +DF+ S G L D + + G + + +L + Sbjct: 58 DSAF----KNELEHNQDFVDLSCRIAGVLFDYMHAHTTIPGADLAVVDFTRDGAPWLGIL 113 Query: 120 VLSNLSSMR-VNENLDINPTHYL---------DINHADIVARIDLTEWETNPESTRYLTF 169 L+ + E ++ P + + + A +DLT++ + Sbjct: 114 KLNYKNGYTHYTETVEGAPVNSIIQQRACLPTQSGKVEEGALVDLTDYS--------MRL 165 Query: 170 LKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSY 229 L+ + F + A+ + + L + Q + AE +V QV Sbjct: 166 LEKKYDIDGHKEFYLSTVVFQYTTAQPEKKKLQAIQEAAVQAVQENYAETPHVEAQVAMM 225 Query: 230 CNEQLQAGE-EIELKSLSKELAGVSE---VSFTEFAAEKGY--ELEESFPADRSTLRQLT 283 Q + ++ ++ + ++L V F ++ + + + +R++ Sbjct: 226 IANQAADNDNQVSIQQVRQQLEEEYPLAAVPFDDYVEKSDVLDSAAQPVTVTPARIRRME 285 Query: 284 KFAGSG-GGLTINFDAMLLG--ERIFW---DPATDTLTIKGT 319 + G+ + LL + + D + +L IK Sbjct: 286 SRSLRTANGIEVKIPTELLNAESEVEFLHADDGSISLLIKNV 327 >UniRef50_B9CNT1 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CNT1_9ACTN Length = 351 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 109/355 (30%), Gaps = 49/355 (13%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 L +++ LH D+ L+ + + L ++ S +G F+E+ Sbjct: 2 LRVSKAILHVFDFETGTK---HFSDTALDLEDRQTRSYVQRRLRKITSNPESRHGEFAEK 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV------- 113 S A L+ G+ F+ FS + L K + +L Y Sbjct: 59 SNFAGGLQEYTHGDFGFVEFSAQIAQWFWENLRKVDETEQCDLLVADYLNTDAATSADTA 118 Query: 114 ---------------EYLLVAVLSNLSSMRVNENLDINPTHYLD------INHADIVARI 152 + +L + + + N D D A I Sbjct: 119 DEASGDDDAFDGDTRRLFAIVLLPRKQAFVHDVSATSNEILRQDATLPNPTQKVDTYAVI 178 Query: 153 DLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA 212 DL + + G+ +++ F L S +++ + V + E Sbjct: 179 DLGTGSIDFHDHE--RLMAGQARHIMSELF---LQCSSEASSQEVISEVTGIVQELAEEY 233 Query: 213 QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEF-AAEKGYELEES 271 L+ A + + + E + + + ++ +++ + A L E Sbjct: 234 NLEPAVEVSRAKAAVAAAVEVHETVDPV---NVGRQVFEDRPEICERYEARAAEKHLPEE 290 Query: 272 FPADRSTLRQLTK--FAGSGGGLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 R ++T+ + G+ I F + + + + +D T++IK Sbjct: 291 VSVKRGPAGRMTRSHKIRTDTGIEITFPSEMTNHPGFLEFTRESDGRMTISIKNV 345 >UniRef50_C0ESI1 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESI1_9FIRM Length = 342 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 127/344 (36%), Gaps = 37/344 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEE 60 + I + LH L + +L ++LL+P + + + ++++ S+ + F E Sbjct: 6 DIVIRKAILHILDTNRGE---CILSNTLLDPGPDLHDFIRNHIYKIVSSDDTKNCEFDPE 62 Query: 61 -SELAQTLRLQRQ-GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 S + L + E F+ S+A +L + + +LF ++ + YL + Sbjct: 63 YSPIYSILETWDESDETSFIETSQAIANKLYVAMGEGLDIPAADLLFVTFQAEGIIYLAL 122 Query: 119 AVLSNLSSMRVN---------ENLDINPTHYL---DINHADIVARIDLTEWETNPESTRY 166 ++ S N DI TH L + I+L+++ +Y Sbjct: 123 LKMNYKESYTHEITEIPDNPVINTDIIKTHSLLPSATSRIPEAVVINLSDYHIKLLEKKY 182 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA-QLDKAERQNVRQQ 225 + G +++ +FL + K + L + +++ + + D + + + Sbjct: 183 E--INGEKAYYLSE---NFLVCRTSIPPKKKLNILTRVINNISNKYDGADLKTKMDTKSA 237 Query: 226 VYSYCNEQLQAGEEIELKSLSKELA---GVSEVSFTEFAAEKGYELEESFPADRSTLRQL 282 ++ + +++ + +L + F E + + + + ST+++L Sbjct: 238 ----LQKEYVDNKSFDIEEIGNKLFGKSPEKKSEFDEKMEQYDLQYDNFTVTNESTVKKL 293 Query: 283 TK-FAGSGGGLTINFDAMLLGERIFWDPATD-----TLTIKGTP 320 K + G+ I+ + ++ TD T+ I+ Sbjct: 294 EKQVMVTDSGIEISIPMETYNKLANFEVQTDVTGKSTIIIRNID 337 >UniRef50_C8W7R3 Putative uncharacterized protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7R3_ATOPD Length = 353 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 51/357 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 L + + LH S L+ + + + L +V + +G F+ Sbjct: 2 LRVTKAILHVFDFETGTKY---FSQSTLDLEDRQTKSYVQRRLRKVTANPESRHGEFAPT 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY------------ 108 S A L+ G+ +F+ FS ++L + + +L Y Sbjct: 59 SNFAGGLQEYAHGDVEFVEFSCQIAQWFWEQLRRADDVEQCDLLVADYIDTDAGQALASS 118 Query: 109 ------------RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLD------INHADIVA 150 + +L + + N N D D A Sbjct: 119 AVNDEDAQAEAFEGEGRRLFAIVLLPRKQAFIHDVNGSSNEILRQDATLPSPTQKVDSYA 178 Query: 151 RIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTA 210 IDL + + G + + F L S ++ + V D Sbjct: 179 VIDLDTGAIDFHDHD--RSVAGEGKFIIPELF---LECSSEASSHEVIGEVTVIVQDLAE 233 Query: 211 EAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEF-AAEKGYELE 269 E L+ A + + + E + + I+ + K + ++ A EL Sbjct: 234 EYGLEPAVEVSRAKAAVAEAAEVEEVVDPIK---VGKRIFEERPEIQEKYEAQVVSRELP 290 Query: 270 ESFPADRSTLRQLTK--FAGSGGGLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 E P R ++ K + G+ I+F + L + + +D T++IK Sbjct: 291 EEVPVKRGVANRIAKNHKIRTDTGIEISFPSNLTDRPGYLEFSHESDGRITISIKNV 347 >UniRef50_UPI0001972DB1 hypothetical protein ClM62_13142 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001972DB1 Length = 336 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 117/339 (34%), Gaps = 34/339 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYS-AKNKAYGLFSEE 60 + + +H L VL D ++ + + + + ++ + + + F E Sbjct: 5 DMIMKLGIVHILD---SSVGVPVLSDCPIDLSGDLSDFLKAHIEKFTESDDVKHCRFGEG 61 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 SE+ + L E+F+ S+ L D + + + +YL Sbjct: 62 SEVKKLLEQCT--PENFVETSKRLAELLYDIMNANIDIPPADLAVVVFSASGSDYLAFLK 119 Query: 121 LSNLSSMR-VNENLDINPTHYLDI---------NHADIVARIDLTEWETNPESTRYLTFL 170 ++ +S + + ++ + + ++L E +Y Sbjct: 120 MNYKTSYTHLTSEKEGKNSNSIILQRALLPGQGQKLSEAFAVNLGTGELLVTEKKY---- 175 Query: 171 KGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSY 229 V + +F + +L L+ K++ + +AVD + D + + + Y Sbjct: 176 --EVNGEKRLYFSELYLECHAPLSQKSKLDLVTKAVDQVNRKYYGDDDAERKMEIKNVIY 233 Query: 230 CNEQLQAGEEIELKSLSKELAGVSE---VSFTEFAAEKGYELEESFPADRSTLRQLTKFA 286 ++L+ ++++SL +++ S +F E + E P + T+++ Sbjct: 234 --KELEEEGALKVESLREKVFPDSPEMQEAFDEKMEKYNLSYETVQPKNEQTVKKFKSQR 291 Query: 287 GSGG-GLTINFDAMLL--GERIFWDPATD---TLTIKGT 319 + G+ I +R+ + D ++ IK Sbjct: 292 LTTDTGIEITIPMEEYQNPDRVEFITNPDGTISVLIKNI 330 >UniRef50_C9LWV7 Putative uncharacterized protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWV7_9FIRM Length = 332 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 108/337 (32%), Gaps = 33/337 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETV-VEMVAELHRVYSAKNKAYGLFSEES 61 I++ ALH L +L + L T ++A + + + +K G F E+S Sbjct: 2 TTIDKAALHILD----AAGSSLLSAAELPLTGETSEYLLAHIEKSRKSPDKKAGTFYEDS 57 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 E + + GE+DFLAFSR + A + L+V + Sbjct: 58 ECRKEIADYLAGEKDFLAFSRILAESFLRAFSHAAEAASMLLFVLEVHEDERRELIVFLC 117 Query: 122 SNLSSMR---VNEN----LDINPTHYL---DINHADIVARIDLTEWETNPESTRYLTFLK 171 + + V+ +++ L D A +DL+ + + RY + Sbjct: 118 RSHAGFSPAVVDTESGLSAELSACGSLLPSASATMDEFAFVDLSTFAAYVRAKRYS--VD 175 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G + + L + +A+ + D V S+ Sbjct: 176 GNAIFVLPEL---VLECGQAPSAREALKKASDTAKKVAEAYGGD---AVETAAAVKSFVA 229 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEF---AAEKGYELEESFPADRSTLRQLTKFAGS 288 +L + + + +E+ + ++ E G+ + S L+++ Sbjct: 230 GELAEKDAVNPLEVGREVFKGNPAMQADYERAIEEAGFAAPVEMDKE-SILKKMKNHKLK 288 Query: 289 GG-GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ + + + D ++T+K Sbjct: 289 TDTGIELVIPTDYFDNTEFVEFRRGEDGTISITLKQI 325 >UniRef50_A5CM71 Putative uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CM71_CLAM3 Length = 345 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 103/341 (30%), Gaps = 27/341 (7%) Query: 2 SLDINQIALHQL---IKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYGL 56 +L ++Q LH++ ++ + + + + E L ++ + Sbjct: 6 ALTLDQTMLHEIPRGRQQASGGQQPLYSSAPTPLNADTDRFIREEMLQPAFAFAREVVAT 65 Query: 57 FSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 S + +R SR + + + G + + Sbjct: 66 EDYGSPVPDLVRAALNDSTQLADSSRDIADWMHK--KQTNGSSAGVFMAALASSSSGPKF 123 Query: 117 LVAVLSNLSSMRVNENLD----INPTHYLDINHADIVARIDLTEWETNPESTRYLTF-LK 171 ++ + +R+N + +L +R+ E + + + Sbjct: 124 IILKAEHQEGVRLNHQTSGGSVVFEVEHLSELIMGQNSRVYKIALMWVNEDGQLVGLMVD 183 Query: 172 GRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + G AD+F+ FLG A+ Q ++ V F L + +R + Sbjct: 184 KQNGASFADYFLQQFLGCDLTHRAEVQTEAFVKTVTAFINSPLLAEEKRTRYATAAVAVL 243 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG--- 287 +++ + SF E + +F D ++Q G Sbjct: 244 ESPAPQLNPKAF--IAEFMDAEDRDSFAEMLPLQIR--SSTFAKDTRLVKQ--NIGGLKL 297 Query: 288 -SGGGLTINFDAMLL-GERIFWDPATDT---LTIKGTPPNL 323 + G+TI + + + D + + IKGT +L Sbjct: 298 KTSSGVTITASSEAMQNGTVTVDSNANAGPQIVIKGTAESL 338 >UniRef50_C7N1T8 Putative uncharacterized protein n=2 Tax=Coriobacteriaceae RepID=C7N1T8_SLAHD Length = 352 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 119/357 (33%), Gaps = 51/357 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 + IN LH N+ +L + + + ++ ++ + +G+F E+S Sbjct: 1 MKINHAILHVFDFISCVNVFATEEVNLEDKSAK-SYISKHANKALNSLDNKHGVFYEDSM 59 Query: 63 LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY------------ 110 A+ L+ QG+ F+ SR L DEL + AD +L + Sbjct: 60 FAEELQAYAQGQRSFMDMSRKIADYLADELGRQQKADSTDLLIVDFEVPVNGNQGGEATD 119 Query: 111 ---------LAVEYLLVAVLSNLSSMRVN----ENLDINPTHYLDI-----NHADIVARI 152 A+ Y + +L + + + + + I A I Sbjct: 120 EEVDASFEGQAMRYFAILLLDSKQAYMHEVGRGDGGRNDIARHFAILPSPSQKVQSYAVI 179 Query: 153 DLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEA 212 DL + + G +AD L S ++K + V+ E Sbjct: 180 DLMTGGVTLSDKK--RLIAGEERFLLAD---GLLQCSMEASSKEAFSAVADVVETVANEY 234 Query: 213 QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV---SFTEFAAEKGYELE 269 + A + +Y E + +L L +E+ F E+AAE+ L Sbjct: 235 GANSALA---LSRAKAYAAEVAFDDGDFDLDELGREVFDGRSDMMGRFDEYAAEE--HLS 289 Query: 270 ESFPADRSTLRQLTK--FAGSGGGLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 D++ +++ TK + G+ I F A I + D ++++K Sbjct: 290 GKMKLDKAAVQRFTKNHKIRTDTGIEITFPAEYGRNPDFIEFISEPDGRISISLKNI 346 >UniRef50_B8I0U2 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B8I0U2_CLOCE Length = 338 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 114/339 (33%), Gaps = 32/339 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEE 60 + I LH L VL D +E + VE + + +++ N F E Sbjct: 4 DIHIKTAVLHILDTSVNFP---VLSDKEIELSGETVEFLEKHISKIFEDTNLKKAQFIGE 60 Query: 61 -SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + ++ F+ +RA D + K G ++ CH+ YL + Sbjct: 61 VNTIKDICNALKEDSGRFMEVTRAIGVMTFDFMLKNIDISSGDLICCHFHAGNEPYLALL 120 Query: 120 VLSNLSSMR--VNENLDINPTHYL--------DINHADIVARIDLTEWETNPESTRYLTF 169 L+ + VN+ + + D D I L E Y Sbjct: 121 KLNYKTGFTHYVNQMEEGAVNSIIRYKTLLPSDGQKVDEAVLISLETDEIKLIEKAYE-- 178 Query: 170 LKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSY 229 + G ++++ + + L+ + + + + + + + ++ ++V S Sbjct: 179 INGTKEFYMSNY---LIKCTTDLSDNQKLKIIDKVTQKISKKYYDEDFDKVAKLKKVVS- 234 Query: 230 CNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESF--PADRSTLRQLTKFA 286 E L+ EI + +++E+ + E+ E + L E ++ ++ Sbjct: 235 --EGLEEKSEIRVDEIAQEVFDTNLAVREEYIQEIQKAGLIEEAIKVPEKLAEKKFKTHK 292 Query: 287 GSGG-GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ INF R I + D ++ IK Sbjct: 293 IKTDTGIEINFPLSYYDNRDMIEFANNPDGSISIIIKNV 331 >UniRef50_C9L8B0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C9L8B0_RUMHA Length = 340 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 117/341 (34%), Gaps = 36/341 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEE 60 + I Q +H L VL D+LL+ + + + ++ S+ F+EE Sbjct: 7 EIKIQQAVVHILD---SALGMPVLSDTLLDCGSDFSDFLKSHIFKIDSSDEIKNCSFTEE 63 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 S + + E+FL S+ G L +++ +L Y+ YL + Sbjct: 64 SSVFLLVEEW--NSENFLEVSQKIAGELYTLMSQNIDIPAADLLVVEYQVEQHSYLALLK 121 Query: 121 LSNLSSMRV--------NENLDINPTHYL--DINHADIVARIDLTEWETNPESTRYLTFL 170 ++ +S N N I L + A IDL +Y+ + Sbjct: 122 MNYKTSYTHLTNSDPWGNNNDIIKQKAILPGETQKLTEAALIDLMA-------PQYVRLV 174 Query: 171 KGRVG--RKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE---RQNVRQ 224 + + ++F +FL L++K + + +AV + + D + + + Sbjct: 175 EKKYDVNGVKTNYFSQNFLKCKGSLSSKTKLAIVNKAVTEVQKKYFHDSEQFEVQMETKS 234 Query: 225 QVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTK 284 + +EQ + + + KE + E + + P + T ++ TK Sbjct: 235 ILNQEFSEQGGLEVPVVIDKIFKE-HPQMKEEVQEKLEKYNLTEDTIEPQNPLTTKKFTK 293 Query: 285 -FAGSGGGLTINFDAMLLGE--RIFWDPATD---TLTIKGT 319 + G+ + +I + D ++ IK Sbjct: 294 QHLMTDTGIELKIPMEEYNNKDKIEFITNPDGTISVLIKNI 334 >UniRef50_A6TSZ2 Putative uncharacterized protein n=2 Tax=Alkaliphilus RepID=A6TSZ2_ALKMQ Length = 345 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 124/343 (36%), Gaps = 34/343 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLF-SE 59 S+ ++ I +H L K E+ L L D E TE + E++ + R + F + Sbjct: 6 SVILHSIIVHVLDKTAEEPL---LTDFQQEITEEIHELIEKHIVRSLKDDDNRIAKFITG 62 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + + E F+ S+ L + ++ C Y + +Y+ + Sbjct: 63 PNIVRDSCDQILYHESSFVESSKIIAQHLFRAMKVNANTSSCDLVICSYSVDSQKYVGIL 122 Query: 120 VLSNLSSM-----RVNENLDINPTHYLDINHADIVARIDLTEWET--NPESTRYLTFLKG 172 + S V++ ++ + + + R+ + L L Sbjct: 123 KMDYRKSYVHDIEYVDDRFKVSIISH-ETGLPGMAQRLQKCAFIKRYEANDEYDLVLLDK 181 Query: 173 RVGR----KVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEA-QLDKAERQNVRQQV 226 + + VA FF DFL + +++K + + + F + D A R + Sbjct: 182 QQAKGSEQDVAHFFAQDFLNCNILVDSKDKTKMFRSMTEKFVRNELRQDVAHAATARDVL 241 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVSEV---SFTEFAAEKGYELEESFPADRSTL-RQL 282 ++ N EEI ++ ++ ++ +E ++ E +G+++ F ++ + ++L Sbjct: 242 ATHLN----KEEEINVRQFAEAMSDDNEEMKNNYIEHLNNEGFQVT-GFEVNKEWVEKKL 296 Query: 283 TKFAGSGG-GLTINFDAMLLGERIFWDPATD-----TLTIKGT 319 + A G I + + + + + + +K Sbjct: 297 KRKAIKTDTGFDIRNERDIFNDPHKFSVQRNGDGTINIVLKNI 339 >UniRef50_A3DC72 Putative uncharacterized protein n=3 Tax=Clostridium thermocellum RepID=A3DC72_CLOTH Length = 343 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 113/328 (34%), Gaps = 24/328 (7%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEES 61 +++ + +H L K + + L + L+ V + + + +F + Sbjct: 4 INVKRAIIHVLDKESSEPM---LNEFELDIDGDVRYFLEKHITKALGDDEARKAVFKDGR 60 Query: 62 ELAQTLRLQRQGEED-FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + + + + + D F+ S+ +L + ++ C Y E + + Sbjct: 61 NIIKEVCQKIFTDNDYFIEGSQEIARQLFKAMKTNSSISSTDLVICIYEEEDEENIAILK 120 Query: 121 LSNLSSMRVNENLDINP----THYLDINHADIVARIDLTEWETNPESTRYLTFL------ 170 + S N DI+ + RI + + T + Sbjct: 121 MDYTVSFIHEVEFVDNKFKISIKKQDISLPGVNQRIQKCAFIRAAQGTGDYDLIILDNQI 180 Query: 171 -KGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 K VA FF++ FLGA L++K R + +++ E + + V Sbjct: 181 SKKNQDEPVAQFFLETFLGADLVLDSKTCTRIFKKETENWIRSK---AKEGETSLEIVRE 237 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE--KGYELEESFPADRSTL-RQLTKF 285 + N+ ++ +EI+L S S ++ ++ + + + F D+ + ++L K Sbjct: 238 FVNDAIRNEDEIDLDSFSSKVFSDKTDLKEDYISTMREKGLTSDRFEVDKEWVEKKLGKI 297 Query: 286 AGSG-GGLTINFDAMLLGERIFWDPATD 312 + + D +R ++ + Sbjct: 298 RLKTESDIEVVIDYEQYNDREKFEIVKN 325 >UniRef50_C2HRJ2 Putative uncharacterized protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HRJ2_VIBCH Length = 397 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 124/350 (35%), Gaps = 41/350 (11%) Query: 6 NQIALHQLIKR---DEQNLELVLRDSLLEP---TETVVEMVAELHRVYSAKNKAYGLFSE 59 +A+H + D + R L P + + + ++ + KNK +G + Sbjct: 33 KMVAVHAMTVELEIDNSKSTVNPRFGALWPLEGEDISFQFIQQVELKFKRKNKFHGYYDS 92 Query: 60 ES--ELAQTLRLQRQG---EEDFLAFSRAATGRLRDELAKYPFAD---GGFVLFCHYRYL 111 E+ ++A L +EDF+A + T L++ + + A ++F HY+ + Sbjct: 93 ETGTQVASYLHKYIASSVSKEDFIALVTSLTSELKNAIFELRVASKVASSKIVFMHYKSI 152 Query: 112 AVEYL---LVAVLSNLSSMRVNEN-LDINPTHYLDINHADIVARIDLTEWET----NPES 163 + L ++ S E L ++++ ID+ ++ +P+S Sbjct: 153 KNDDFGRILAVMVDKKSGFDFTEESLLPKQAQHINLEALKQAVSIDVDLFDACYPSSPKS 212 Query: 164 TRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 YL F++G A +F + G +E + L +A+D + L Sbjct: 213 EAYLKFIRGSSS---ASYFRNAFGCNEKSDNGESLNNLYRAIDSYATIKNLGADFYFEAE 269 Query: 224 QQVYSY-CNEQLQAGEEIELKSLSKELAGVSEVS-------FTEFAAEKGYELEESFPAD 275 ++ + N + + + + + FT F E + + + Sbjct: 270 DKLTDFVVNIKNTERSSFSINQAASVIESALPPNRVDLENTFTTFVNESEFMINQYIEPT 329 Query: 276 RSTLRQLTK--FAGSGGGL------TINFDAMLLGERIFWDPATDTLTIK 317 +++ F+ GL +I G+ + ++ T L IK Sbjct: 330 SQQVKEHLWIDFSDQDNGLIARVHSSIEIGKKGDGKDVEFNEQTRKLEIK 379 >UniRef50_A4E7M9 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E7M9_9ACTN Length = 337 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 110/331 (33%), Gaps = 25/331 (7%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVE--MVAELHRVYSAKNKAYGLFSEE 60 + IN LH L V+ L+ V + L R ++ + F+E Sbjct: 4 MKINHAILHILDFDS---AVNVMSQRELDIESRTVRNFVTTHLRRARTSADNKRATFAEN 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL-AVEYLLVA 119 S L+ GE +F+ S+ + EL K A+ VL + + V Sbjct: 61 SAFGGELKGYFFGEREFVDLSQQIAEFISSELTKAEKAESTDVLVADFDDDEDARWFAVM 120 Query: 120 VLSNLSSMRVNENLDINPTHYLDINHADIVARIDLT----EWETNPESTRYLTFLKGRVG 175 +L + + ++E DI + + + ST + ++ + Sbjct: 121 LLGSKQAF-MHEVGREEGEVRNDIAR-HYAILPNPSQKVPSYAIVRASTMEIGYVDKKRK 178 Query: 176 --RKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNE 232 + D L G++ K + + V++ E + A + E Sbjct: 179 IAGEDRMLIPDGLLQCDTGVSGKEVIDTVTRVVEEVAEEHGANTAVALAKVKAAV---AE 235 Query: 233 QLQAGEEIELKSLSKELAGVSEVSFTE-FAAEKGYELEESFPADRSTLRQ---LTKFAGS 288 +++ EE+ + E+ V AA ++ E P +R + + + Sbjct: 236 KVEDDEELPPWDIVDEVFEDEPVIKESVRAALTEEKVPERVPVERKQVERAAVRNHKIRT 295 Query: 289 GGGLTINFDAMLLGER--IFW-DPATDTLTI 316 G+ I+F A + I + + ++I Sbjct: 296 DTGIEISFPAEMGSNSEYIEFVNEPNGLISI 326 >UniRef50_B1R015 Putative uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R015_CLOBU Length = 332 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 118/338 (34%), Gaps = 30/338 (8%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE 60 ++ I + H L K VL + + + + ++ + ++ +F ++ Sbjct: 3 TILIKKYITHVLDKNMGIP---VLSSKEQNLDIDINNFLEKNISKMLNDQSVKNAVFLDD 59 Query: 61 SELAQTLRLQRQGE-EDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 S+ E ++F + L + + G ++ C + + +L + Sbjct: 60 SKAKLLCEKIMSNEIKNFDLITTEIAMNLFQIMEQDLEISSGDLVCCLFLLNDIMHLALL 119 Query: 120 VLSNLSSMRVNENLD-------INPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172 L+ S + D T + D A I+L + +Y Sbjct: 120 KLNYRHSYTHFVDKDRVVQIIKNKTTFINESQKIDEGAIINLKDLSIRLIEKKY------ 173 Query: 173 RVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 ++ ++F FL ++ K + + + D+F + ++ E ++V Sbjct: 174 PKNKECFEYFSKKFLECKTEISNKEKLKIFNKINDEFNKKYFNNEIEEDLKMKKV---IL 230 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESFPADRSTLR---QLTKFAG 287 + + ++++ L++++ +E + E K + + + T++ ++ K Sbjct: 231 DSIDDNSDLKMDELAEKVFSENEEVKNNYINELKNSGIYNTTLIESETIKKSFKMQKIKT 290 Query: 288 SGG-GLTINFDAMLLGERIFWDPATD---TLTIKGTPP 321 G + + FD ++ ++ D ++ +K Sbjct: 291 DSGIEINLPFDIYNDKNKVEFNNNVDGTISIVLKNISK 328 >UniRef50_Q72ZR6 Putative uncharacterized protein n=1 Tax=Bacillus cereus ATCC 10987 RepID=Q72ZR6_BACC1 Length = 352 Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 118/332 (35%), Gaps = 25/332 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSL--LEPTETVVEMVAELHRVYSAKNKAYGLF-S 58 +++I ++ H + + L + E + +V + + + +F + Sbjct: 3 NIEIKRVIAHHMDLGATKPTFLNNVIDISQEEMQDVIVFFGNHVKKALTTAQLKTCVFKN 62 Query: 59 EESELAQTLRLQRQGEED---FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV-- 113 E+ E+ + + + + D F+ +R T +L + + ++F HY + Sbjct: 63 EDDEVYKYCKELAEDQSDDKLFVRVTRRMTIKLFYNMKRTSSTSSATLIFLHYFNVDSGK 122 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDI----NHADIVARIDLTEWETNPESTRYLTF 169 +YL + + + ++ + + A I L E ES Y+ Sbjct: 123 DYLGILKMDPNDGIELDPERVVFKVRKHMLPNVKERLHKSAFIKLDEKLFAEESHLYV-L 181 Query: 170 LKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 K + ++ FF++ FL A E + K AV + ++ + ++V Sbjct: 182 DKQQKMDGISKFFLEAFLNAKEVNSDKKTTAFFNTAVMEVARSEKVPNMFA--IAKKVSD 239 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEE-------SFPADRSTLRQ 281 E + L+ + + E F +F ++++ F ++ Sbjct: 240 SMTEGKYIKVDSMLEEVLHDFIPGEEDRF-DFIERVKQQMKKKNEDVQFEFTVEKEK-EA 297 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPATDT 313 ++ + + F ++LLG +F+D D Sbjct: 298 ISFLHNDDKSIQLRFKSILLGTDVFYDEEEDE 329 >UniRef50_Q210V3 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q210V3_RHOPB Length = 354 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 105/329 (31%), Gaps = 35/329 (10%) Query: 2 SLDINQIALHQLIKRDEQNL--ELVLRDSLL-EPTETVVEMVAELHRVYSAKNKAY---- 54 +L + ++ LH++ KR L+ P E + + A ++ Sbjct: 5 NLVVARVMLHEVFKRRHDGALVSPHYGTQLIALPPEAMDMFKERVVDAMGAVSQCMEMEI 64 Query: 55 GLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVE 114 ES +A L + F+ S +L + GG ++ A Sbjct: 65 AEAGAESAVAIAFSLVGMPDATFVTDSVKFADKL-ANAQQAKNLPGGKLVVFSGTIGATP 123 Query: 115 YLLVAVLSNLS---------SMRVNENLDINPTHYLDINHADIVARIDLTEWETNPES-- 163 VAV+ ++ ++L + P L I + +T ++ P+ Sbjct: 124 RPFVAVIKAEKQSGFRERGTALEFFKDLFLTPASKL----YKIGFFVQMTAGQSLPQGWI 179 Query: 164 -TRYLTFLKGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 Y + + + A +F FLG N+ R F ++ + + Sbjct: 180 AHVYDSQMTTQNREGAAKYFFGTFLGCRIPQNSAHLTRVFFDHTRTFIRALPVEPEVKDD 239 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE-VSFTEFAAEKGYELE----ESFPADR 276 + +Y+Y ++ I++ + S +T + K + L + Sbjct: 240 LLTSLYTYL--KVDQTPTIQVNNFSTAYLPTEARDDYTNYMQGKNFPLNAVQKDISEVSS 297 Query: 277 STLRQLTKFAGSGGGLTINFDAMLLGERI 305 ++ +F+GS + ++ I Sbjct: 298 QLRKRRVRFSGS---IELSAPPESFKHLI 323 >UniRef50_B4S2L9 Putative uncharacterized protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S2L9_ALTMD Length = 365 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 117/329 (35%), Gaps = 31/329 (9%) Query: 32 PTETVVEMVAELHRVYSAKNKAYGLFS---EESELAQTLRLQR--QGEEDFLAFSRAATG 86 VV+ E + ++K + S + LA + +G+ F F ++ Sbjct: 33 TNSYVVDFAKEAEQKIRKRSKNHAKISFPPKPKSLASSFHNHLISEGKISFFDFVKSMQT 92 Query: 87 RLRDELAKYPFADGGFVLFCHYRYLAVE----------YLLVAVLSNLSSMRVNENLDIN 136 L +F Y+ + LLV +L + S++R N++ Sbjct: 93 ENSIALKTSRVQSKVVQIFLKYKKEREDSTEDNTSYVENLLVVLLKDKSALRFNDDGAPR 152 Query: 137 PTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKA 196 T+ +D A I++ E+ + + + ++F+DF A + Sbjct: 153 GTNIIDFEDVMQGAIINIGEFVESISEKKDIDVSFINGSGGTTNYFVDFFDADNLIKNNE 212 Query: 197 QNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGV---- 252 ++ A++ F +LD+ +R+ +V + + ++ LS + Sbjct: 213 SVTNVIDALNKFLEHKKLDRTQREECISKVVGRIDYNERQSFATKVHELSAVIYSTLRKE 272 Query: 253 -----SEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTIN-----FDAMLLG 302 S SF +F E Y++ E F +S +L + + F + Sbjct: 273 ENIEISSSSFEDFIHEYNYKVNEEFKVTKSDRDKLVFISLDTEVGELKLKKSLFKGVGRK 332 Query: 303 ERIFWDPATDTLTIKG--TPPNLRDQLQR 329 + ++ + LT+K P + ++L++ Sbjct: 333 GNVDFNSNNNELTVKTKIKDPAIIEELKK 361 >UniRef50_Q18AC3 Phage protein n=12 Tax=root RepID=Q18AC3_CLOD6 Length = 331 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 115/339 (33%), Gaps = 36/339 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNK-AYGLFSEES 61 + +++ +H L K + + L D + +V + S N +F++ S Sbjct: 1 MIMHKFIIHVLDKNSDTPI---LNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYS 57 Query: 62 E--LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + E FL S+ L D + + + C Y + + + Sbjct: 58 NNLIKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAIL 117 Query: 120 VLSNLSSMR---------VNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 L +S N + N + + I A I L+ +L L Sbjct: 118 KLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLS----GINDEYHLKVL 173 Query: 171 KGRVGRKV--ADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 ++ + F +FL A++ + K + + VD + A D + ++VR + Sbjct: 174 DKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLY 233 Query: 229 YCNEQLQAGEEIELKSLS-KELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQ--LTKF 285 E+ + +++ + K + + SF + EKG ESF D+ + + + Sbjct: 234 MLREKQK----LDINEFADKAIKDDLKDSFKDHIEEKGI---ESFNIDKKWVEKNLKNRH 286 Query: 286 AGSGGGLTINFDAMLLGERIFW---DPATDT--LTIKGT 319 + G I + + + T + IK Sbjct: 287 IKTDTGFEIKGKMEDFEDFMKYGIRHNGNGTVDIVIKNV 325 >UniRef50_UPI000169395D hypothetical protein Plarl_13324 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169395D Length = 351 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 120/354 (33%), Gaps = 32/354 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETV-VEMVAELHRVYSAKNKAYGLFSEE 60 +++I+++ H L L + V + + AK F+ + Sbjct: 3 NIEISKLIAHDLALDKASPKTYQQLMDLSQIPAEVLEFFSSHISNAVIAKQIKVCTFTHK 62 Query: 61 SE--LAQTLRLQRQGEED--FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV--E 114 L + + +D F+ S T L + + G ++F Y L Sbjct: 63 DAAVFLGCLEISQDLADDHLFINNSTNMTQLLFNVMKASSSRSSGTLIFILYNDLDTGLP 122 Query: 115 YLLVAVLSNLSSMRVN--ENLDINPTHYLDI--NHADIVARIDLTEWETNPESTRYLTFL 170 YL + + +++++ + L A I L+ E + Sbjct: 123 YLAILKMDPNKAIQIDRTNYKFVVQEDILPSVNERLHKCAFIKLSPTLWEDEFHLKV-LD 181 Query: 171 KGRVGRKVADFF-MDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQ--NVRQQVY 227 K +V +V+ +F + FL + ++ KA + + ++ + Q+ + + + + +V Sbjct: 182 KQQVTGEVSKYFLLSFLESQALIDNKAMTELVSVNLAEYAIQEQIIRTQLEIVDFNAKVD 241 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSEVS------FTEFAAEKGYELEESFPADRSTLRQ 281 ++ + +L +L K F + +K + F A++ Sbjct: 242 RLLSKGNDVDLDRDLDNLFKTYIAGDADRVNKIDGFKQKLVQKRENVMFEFVAEKRP--T 299 Query: 282 LTKFAGSGGGLTINFDAMLLGERI--FWDPATD-----TLTIKGTPPNLRDQLQ 328 + FA + I F + ++ + D + IKG L+++ + Sbjct: 300 IAMFADPDRLIKIQFPLQDMDTKVFLEYKKEEDGSVTTIIKIKGV--ELKEKFK 351 >UniRef50_B4S2T2 Putative uncharacterized protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S2T2_ALTMD Length = 362 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 102/340 (30%), Gaps = 45/340 (13%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPT---ETVVEMVAELHRVYSAKNKAY----G 55 ++IN+IA+HQ+ +RD + + + +KA Sbjct: 6 ININKIAIHQIYQRDSMSEVVEPTKGEDLINFDVAASHTFKTRVTEALGNDSKAVEMAIK 65 Query: 56 LFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 ++S + + RL + DF+ S L E GG V+ Y + + Sbjct: 66 KDGDDSIVCKVDRLISASDPDFIQTSYDIAYDL-AEAQNRRSYTGGIVVVFKGAYGSNKT 124 Query: 116 LLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEW-------------ETNPE 162 + ++ + D + T + + + T+ +T Sbjct: 125 PFIGIMKAEIYSAYEKKQDPH-TKQITLQYVQEALLTPATKLYKTAGFFLKPDAEKTTDL 183 Query: 163 STRYLTF-----LKGRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDK 216 +Y + G+ A +F FLG ++ + DF E + + Sbjct: 184 KDKYTVLVSDTQISQVDGKAAAQYFYSAFLGCGYPESSARTTYKFYEVTKDFIDELSIPQ 243 Query: 217 AERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS------------FTEFAAEK 264 + + + SY + + IE K S E S F+ F + Sbjct: 244 DRKNQLLNALNSYL--KFENNSVIEPKEFSNRYFDKEERSQYKDEIDESGLPFSAFTKDT 301 Query: 265 GYELEESFPADRSTLRQLTKFAGSGGGLT--INFDAMLLG 302 + +E + ++ + + F+ + Sbjct: 302 KF-IESKLQMRKIEFKKQVRITAPAKDFGEIVTFEEYDVD 340 >UniRef50_C4VH46 Fkbp-type peptidyl-prolyl cis-trans isomerase n=41 Tax=Lactobacillales RepID=C4VH46_ENTFA Length = 334 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 105/343 (30%), Gaps = 40/343 (11%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 M + + + LH + + + L TE + + S G +E Sbjct: 1 MDIYLKKAILHIIDRETGTPVFSE--KELDLTTEYIRTYLTAKISKLSTAQTKTGTLAEN 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 S TLR DF+ S+ T D + A +LF Y V L VA+ Sbjct: 59 SSFVDTLRGI---PSDFVKKSQEVTQHWYDVYSGSEDAPSADILFILYELDTV--LHVAM 113 Query: 121 LSNLSSMRVNENLDINPTHYLD------------INHADIVARIDLTEWETNPESTRYLT 168 + +D + D +DL RY Sbjct: 114 IKLNYKESYTHYVDYEEESVYNKLIINRAILSSKSQKPDEGITVDLDTLAFELLEKRY-- 171 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDK-AERQNVRQQVY 227 G K+ F + + + + + +AV + D+ +V++ VY Sbjct: 172 ---EFSGEKIWYFSEKVIETQAAPSMEENIKEIKKAVKRIGKKFNEDEFELMASVKEAVY 228 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESFPADRS----TLRQL 282 E I+ + +++++ + + + E + + P R + ++ Sbjct: 229 DSIEETG----TIDNEQIAEQVFKENVSAKLAYQEEVNESKFVDKTPPVRESREISEKKF 284 Query: 283 TKFAGS-GGGLTINFDAMLL--GERIFWDPATD---TLTIKGT 319 K G+ + + G+ I + D ++ +K Sbjct: 285 GKQKLKMDNGIELIVPLDVYRNGDLIEFVNNPDGTVSIMLKNI 327 >UniRef50_C1HX40 Predicted protein n=15 Tax=Neisseria gonorrhoeae RepID=C1HX40_NEIGO Length = 346 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 31/313 (9%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVV-EMVAELHRVYSAKNKAYGL------F 57 + +I H++ ++E + + S + E + NK++G+ Sbjct: 1 MKKIITHRIYPKNENRERVESKISTHLIDLPITARRTLETRLTKALGNKSHGIEMSVVNT 60 Query: 58 SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 +E S +Q + E +F+ S + + A GG +L R Sbjct: 61 AENSFFQIAAAIQLKEEAEFIEDSAQFA-HMLTDAQLNTNAPGGILLVLKGRVGDTGKPF 119 Query: 118 VAVLSNL--SSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP--------ESTRYL 167 + V+ R E D +L+ AR+ + +S Y Sbjct: 120 LCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIGFLVAETVRPLEQIQSGNYR 179 Query: 168 TFL-----KGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN 221 FL R A +F FLG S +++ + + +F + L + + Sbjct: 180 AFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQDFFEWTRNFIDNSDLSDDAKLD 239 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLS-KELAGVSEVSFTEFAAEKGYE---LEESFPADRS 277 + + A I + + + L ++TEF EK + + + ++ Sbjct: 240 AHEALRVTLK---SAEATISVNNFAQNHLPQEKRTTYTEFMVEKDFPQNAVSKDIEYIKT 296 Query: 278 TLRQLTKFAGSGG 290 LR+ + S G Sbjct: 297 RLRKRRSYGFSNG 309 >UniRef50_A1ZY92 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY92_9SPHI Length = 353 Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 117/340 (34%), Gaps = 37/340 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 + + I +H + + ++ + L +LL + +++ + + + S K A+ F +S+ Sbjct: 7 VSLQNIVVHNVGNKSKEEG-VQLSKTLLNLNDDLIQDLLLKYFLSSFKTDAFFQFGHDSD 65 Query: 63 L-----AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL 117 + + + ++F S L E + + GG H+ V+ L Sbjct: 66 VNLNEVYHYVDQIFENPDNFYDQSVNIAKHLY-EASHHNKIKGGEFYIVHFTDCIVDDEL 124 Query: 118 -----VAVLSNLSSMRV----NENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 + N + N N +I+ ++IN D I + T E + Sbjct: 125 ADAVGLFKSENKDTYLRVYQQNNNFNIDYADGININKLDKGCLI----FNTEKEHGYKVC 180 Query: 169 FLKGRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFT-----AEAQLDKAERQNV 222 + A ++ DFL N + L DF E ++++ E+ + Sbjct: 181 IVDNLNKSSQAQYWRDDFLRVKPYENNFYHTQNYLTMCKDFVDEVLSEEQEVERPEQIAL 240 Query: 223 RQQVYSYCNEQLQAGEE------IELKSLSKELAGVSEVSFTEFAAEKGYELE-ESFPAD 275 + Y E+ E I+ + + E + E EL+ E F Sbjct: 241 LNKSVEYFKEKEVFNESEFEQEVIQKPEVVEAFREYKEQYKEQHKEEADVELKFEDFEIS 300 Query: 276 RSTLRQLTKFAGSGGGLTINFDAMLLGERIF----WDPAT 311 + +++ K S L NF + G R + +D Sbjct: 301 SNAVKETKKKFKSVLKLDKNFSVYIHGNRDYVVKGFDEER 340 >UniRef50_C0GKS8 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKS8_9FIRM Length = 335 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 123/345 (35%), Gaps = 35/345 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEE 60 S+ IN+ LH + + L + L+ V + + L + +++ + G FS++ Sbjct: 5 SIAINKAILHIIDPNFDFPF---LSNVELDKEGEVWDFLENHLRKSFASDSIRAGRFSDD 61 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + L ++ ++ F++ S L + + K+ ++F + E+L + Sbjct: 62 -DYETKLLVESISDDSFVSVSAELAKVLFNLVKKFSLPPS-DLIFTLVKINQEEHLAILK 119 Query: 121 LSNLSSM--RVNENLDINPTHYL--------DINHADIVARIDLTEWETNPESTRYLTFL 170 + + + + D + + D ++L + Y + Sbjct: 120 FNYKETYIHYIENSGDSTHNKLIKQKTTLPSETQKVDECIFVNLHNLDIKILEKSYE--I 177 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 G ++ FL + L+ K + L ++V + D ++ Q S Sbjct: 178 DGEKEFYLS---TRFLKCANDLSTKEKVAILTKSVRKVCKKYSDDDFDKVVEFQTAVS-- 232 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEES---FPADRSTLRQLTKFA 286 E + +++ ++ + E+ E + L+E + STL++L + Sbjct: 233 -ESAEESNAVQISQVANAVFKE-PGLQKEYLEEVQKAGLKEDVVHISEESSTLKRLGRNK 290 Query: 287 GSGG-GLTINFDAMLLGER--IFWDPATD---TLTIKGTPPNLRD 325 G+ INF + ++ I + D ++ IK + Sbjct: 291 IKTNTGIEINFPSHCYSDKDMIDFINNPDGTISILIKNVSIENKK 335 >UniRef50_C1D8S7 Putative uncharacterized protein n=3 Tax=Neisseriaceae RepID=C1D8S7_LARHH Length = 337 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 122/331 (36%), Gaps = 28/331 (8%) Query: 1 MSLD---INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYG 55 M + I ++ +H++ + L+L E E V ++ E L + S + K Y Sbjct: 1 MQIQDATITRLVVHRVG-NATRGEPLLLSGRATEIDEAVSGLLLEGYLKGIVSERRK-YQ 58 Query: 56 LFSEE----SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR-Y 110 F E +E+ Q R +GE DFLA+S+ L +++P G V + Sbjct: 59 FFHESDLKLNEMYQYSRECFRGELDFLAYSQRVAKHLYAR-SQHPNISAGDVFVIEFAGL 117 Query: 111 LAVEYLLVAVLSNLSSMRVNENLDINPT-HYLDINHADIVARIDLTEWETNPESTRY--L 167 E + A+ S +R ++ L + + I H + I+ + Y Sbjct: 118 HDGEREMRALGIFKSEIR-DDFLTLTESGQEFAIGH---ASGINPRLIDKGALVLEYGPY 173 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVY 227 + R+G++ + DFL A + A R + + V++ + D + + + Sbjct: 174 AYAVDRLGQQAKFWTEDFLQAMRLPDPAATTRVVAKVVEELSGTLD-DPLTQSRFKDDML 232 Query: 228 SYCNEQLQAGEEIELKSLSKELAGVSE--VSFTEFAAEKGY--ELEESFPADR--STLRQ 281 + C E Q + +++ +F GY E + PA+ L + Sbjct: 233 TLCQESEQLSAS-DFSRAAEQYLPRETVHQAFDSAVEASGYTFEAAPAVPAESMARRLER 291 Query: 282 LTKFAGSGGGLTINFDAMLLGERIFWDPATD 312 + G G G+++ + TD Sbjct: 292 MLSRYGVGHGISVLLPHGTTLRAVESSAGTD 322 >UniRef50_D0KGW1 Putative uncharacterized protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KGW1_PECWW Length = 363 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 111/340 (32%), Gaps = 50/340 (14%) Query: 3 LDINQIALHQLIKRDEQNLELVL-------RDSLLEPTETVVEMVAELHRVYSAKNKAYG 55 L I+QIA+HQ+ RDE E R + + +V L SA Sbjct: 6 LTIDQIAIHQIFPRDENRKEKKPVMGTELIRFDKIAMDDFKRRVVDSLGNGSSAVRMQIT 65 Query: 56 LFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF---------- 105 + S +L E++F+ S L + + G V+F Sbjct: 66 DHKKGSTPLLVSKLHGLKEKEFIQTSYEIASNLSAAQTRKGMSGGIVVVFSAFYNPQKLH 125 Query: 106 --------CH--YRYLAVEYLLVAVLSNLSSMRVNENLDINPT-------HYLDINHADI 148 H Y + + L ++ + + + + + +D + Sbjct: 126 LVGIIKADIHSGYEKYQDKNTGLISLKHVEELLLTPSTKLYKSAGFFRREDAVDSKDLNE 185 Query: 149 VARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDD 207 +++++++ + G+ A +F FLG ++ + + + Sbjct: 186 QWLVEISDYQ-----------INKSDGKAAAQYFYQTFLGCDYPESSARTTKKYFELATE 234 Query: 208 FTAEAQLDKAERQNVRQQVY-SYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGY 266 F +E +D+ ER N+ ++ + + E ++ + +F E+ + + Sbjct: 235 FISEMDIDEQERTNLHNALFADLKARKSEQVEPLKFAE--TYMKAEDVDNFREYLEDSDF 292 Query: 267 ELEESFPADRSTLRQLTKFAGS-GGGLTINFDAMLLGERI 305 +E + +L + I+ + + E I Sbjct: 293 PVEAFIKDTQHITSKLKNRRVKFSKDIRISAPSEIFEELI 332 >UniRef50_A8RDZ2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDZ2_9FIRM Length = 315 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 108/293 (36%), Gaps = 27/293 (9%) Query: 39 MVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFA 98 ++++L R++ ++NK F + S++ + + + E F S+ R+ +E KY Sbjct: 26 LMSKLKRIFKSQNKRQATF-DNSDIEKWIFDYKTTEATFEETSKRIAQRIFEEKRKYNVF 84 Query: 99 DGGFVLFCHYRYLAVEYLL---------VAVLSNLSSMRVNENLDINPTHYLDINHADIV 149 +FC + + YL+ + + + +S +V ++ L Sbjct: 85 HSSDFIFCEVKVDDIRYLVGIDNANTQKLTHVIHTNSGKVENEFLLHKA--LFSESLLKD 142 Query: 150 ARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFT 209 RI + E+ T+ + F + L + K + + ++ + + Sbjct: 143 DRIFIIEYATSALQLIETPYHN-------TYVFEEILQCKAKQSYKETLKIMSESAEVIS 195 Query: 210 AEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELE 269 L+ E + E ++ + ++ + +++++ ++ +F + + Sbjct: 196 ERYNLNALETMPALKSAV---VECIKEEDALQAEEIAQQVFRGHTLAQQDFVRDMKSQGV 252 Query: 270 ESFPAD--RSTLRQLTKFAGSGGGLTINFDAMLLG--ERIFW-DPATDTLTIK 317 +S + R + T+ + G+ + LL + + L+I+ Sbjct: 253 DSMSVENIRPAKSEKTEKIRTDSGIELTIPVDLLNSKNDVEFITEDDGKLSIR 305 >UniRef50_B9TLD4 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TLD4_RICCO Length = 177 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 5/152 (3%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEESE 62 +I + +H+ K +V R L++ T+ V +V LH +Y K K YG F ++ + Sbjct: 26 EIRGLVVHKFEKVAHGQGVIVPRHDLVKVTDPVQRLVDALHTLYGEKTGKGYGKFEDDED 85 Query: 63 LAQTLRLQR----QGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 R R +DFL FS AA L+ + P A GG+VL H A ++LL Sbjct: 86 TFPMQRRVRAYFVDATDDFLTFSHAAMKILKGKADDVPLATGGYVLIAHIHNGARDFLLF 145 Query: 119 AVLSNLSSMRVNENLDINPTHYLDINHADIVA 150 A++++ + + L+I ++D+N + Sbjct: 146 AIVTDTVGSAITDKLEIEDRAHVDLNKFRLAG 177 >UniRef50_C5RFZ5 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFZ5_CLOCL Length = 342 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 119/344 (34%), Gaps = 27/344 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETV-VEMVAELHRVYSAKNKAYGLFSEE 60 + IN+ +H L E+ + L + L E V ++ L + + YG+F+E Sbjct: 6 DISINKGIIHILDTSIEEPI---LTEFPLALGEEVQEYLLKHLKKSLRDEELKYGVFNEG 62 Query: 61 SELAQTL-RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + +T+ R DF++ S+A L + VL + + + Sbjct: 63 ENILKTIIDNYRYSTIDFISMSKAIAQNLFAVMKDNCAGP-CDVLIVDFLTEYGHIVGIL 121 Query: 120 VLSN--LSSMRVNENLDINPTHYLD--------INHADIVARIDLTEWETNPESTRYLTF 169 L + V+ + ++ A I +TE + Sbjct: 122 KLDYIKNYAHSVDIVDEKVGIKIIEQYSGLPGGGQKLQKCAFIKVTENDNAHRLMVLDKK 181 Query: 170 LKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSY 229 +K G + F FL N + + +Q+ + +T E + E + + Sbjct: 182 VKNPEGEEETYFVEKFLQCDFFQNERDMTKSFIQSAEKWTQE---NLKESADDAEAFRRT 238 Query: 230 CNEQLQAGEEIELKSLSKELAGVSEVSFTEFAA-EKGYELEESFPADRSTL-RQLTKFAG 287 +LQ +EI++ +L +E S S F+ + L+E+ D+ L ++L + Sbjct: 239 IRRKLQEDDEIKIPNLVEEFFKDSMESKASFSQYMEKAGLQETVALDKEYLEKKLKRARL 298 Query: 288 S-GGGLTINFDAMLLGERIFWD---PATDTL--TIKGTPPNLRD 325 + I + + + ++ T+ IK + Sbjct: 299 KIDKDIDIYINQDAYNDPLRFEIKRNGDGTINMVIKNISNYIEK 342 >UniRef50_C6X274 Putative uncharacterized protein n=2 Tax=Flavobacteriaceae RepID=C6X274_FLAB3 Length = 338 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 116/325 (35%), Gaps = 35/325 (10%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSE----E 60 +++I +H++ R Q L+L +L+ E + E++ + + Y +SE Sbjct: 2 LSKIIVHKVGNRINQE-SLILSQEVLQLDEEMTELLEDFFLKSFKSEEQYRFYSETYLVN 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV------E 114 + + + + F+ + L D + + P G + ++ + Sbjct: 61 NTVYGAAAEIFEDKAKFIEEAENIAQHLYD-ITENPRVQSGELFIVYFEGEENVDGNKID 119 Query: 115 YLLVAVLSNLSSM-RVNENLDINPTHY---LDINHADIVARIDLTEWETNPESTRYLTFL 170 + + N + ++ + + D A I + ++ ES ++ + Sbjct: 120 SIGIFKTENKNPFLKIFPEGQTFEIEKDYGIGLAKLDKGALI----YNSSKESGYAVSVV 175 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFT-----AEAQLDKAERQNVRQQ 225 +F +FL + + + L DF E ++ KA++ + + Sbjct: 176 DNNKNGDADYWFENFLKVKQRDDEYFHTQETLSVYKDFITKQLPQEFEVSKADQADFLNK 235 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSE--VSF----TEFAAEKGYELEESFPADRSTL 279 ++ E+ + + + + E+ SF +++ E + E F + + Sbjct: 236 SINFFKEK----DTFDYEEFTNEVLEDKSVIESFSNFKSDYEQEMQVSISEDFAISEAAV 291 Query: 280 RQLTKFAGSGGGLTINFDAMLLGER 304 ++ ++ S L NF + G+R Sbjct: 292 KKQSRGFKSVIKLDKNFHIYVHGDR 316 >UniRef50_A3WXK2 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXK2_9BRAD Length = 325 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 98/312 (31%), Gaps = 37/312 (11%) Query: 31 EPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRD 90 + + + + V Y F ++ + L + + F S + Sbjct: 12 DAGQHAAFFLGRVRSV--NSGNRY-KFLADAPVQAQLARISRDKATFQEESEKLATA-FN 67 Query: 91 ELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNEN---------------LDI 135 E A G F++F L A+L ++ + +I Sbjct: 68 EAHGGSAAVGAFLIFSLSCSSGQ---LFALLKFEDEKVLSYDYDVSRGRSGKPKPTFGEI 124 Query: 136 NPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAK 195 T + N A I L + + + + ++ A +F FL + Sbjct: 125 ERTFVQNRNALQKAALIKL------RKDGNEICVVDRQNPQRPAAYFEQFLLVRRQRTEE 178 Query: 196 AQNRGLLQAVDDFTAEAQ--LDKAERQNVRQQVYSYCNEQLQ-AGEEIE--LKSLSKELA 250 + ++ + + + L +N+ Q++Y GE E LKS+ L Sbjct: 179 ELTKTIINVTRNIAQKHKDVLPPDTMKNLAQRLYDASQSGGSVDGESAENWLKSIFGPLP 238 Query: 251 GVSEVSFTEFAAEKGYE--LEESFPADRSTLR-QLTKFAGSGGGLTINFDAMLLGERIFW 307 S V +F A E ESF ++ ++ + + G+ + F L + Sbjct: 239 DDSPVV-KDFKAGLKREGMAGESFVLQKNAIQAPRNRRVETASGIKLTFPVGLTSSVVSV 297 Query: 308 DPATDTLTIKGT 319 + + IK T Sbjct: 298 NRDKGEIIIKDT 309 >UniRef50_A0PYK9 Conserved protein n=46 Tax=Clostridium RepID=A0PYK9_CLONN Length = 348 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 111/329 (33%), Gaps = 25/329 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + IN+ +H L ++ + + L E + + + + + Y +F++E Sbjct: 9 DITINEAVIHILDNNADEPILNEYKLELN--DEVYTFLTKHIQKCFKDEELKYAVFNDER 66 Query: 62 E-LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + + E +FL S+ ++ + ++ H L V Sbjct: 67 NIVKDVSQEFLSKECEFLEASKELARQMFILMRSKGSIASCDLVVVHISTEYGSMLGVMK 126 Query: 121 LSNLSSMRVNENLDINPTHYLDINHAD----IVARIDLTEWETNPESTRYLTFL------ 170 + + + + I +I+ + + Sbjct: 127 MDYIKNYFHTVEVVDEKIDINIIPQYTGLPASGQKINKCAFIKPIRDDNEYDLMVIDKQT 186 Query: 171 -KGRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 + +++F+ ++LG N + + ++ + +T + AE Q + + + Sbjct: 187 KNKKSEEYGSNYFIGNYLGCRVIDNERDITKSFVETAEKWTRTNLKENAEAQ---ENIRN 243 Query: 229 YCNEQLQAGEEIELKSLSKELAGVS---EVSFTEFAAEKGYELEESFPADRSTL-RQLTK 284 ++L+ EE ++K ++++L G + SF F E+G E D+ + ++ + Sbjct: 244 TIKKKLREEEEFDVKEVAEDLFGDETVVKESFVNFVKEEG--GVEKVAVDKEWVDKKFKR 301 Query: 285 FAGS-GGGLTINFDAMLLGERIFWDPATD 312 + + + + ++ + Sbjct: 302 IRLKIDKDIDVYLNEDAYNDNSRFEIIRN 330 >UniRef50_B0M9M1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0M9M1_9FIRM Length = 350 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 104/322 (32%), Gaps = 27/322 (8%) Query: 17 DEQNLELVLRDSLLEPTETVVEMVA-ELHRVYSAKNKAYGLFSEE-SELAQTLRLQRQ-G 73 D N L L + LL+ ++E + + ++ + + F S + L + Sbjct: 31 DSHNGYLGLSNDLLDLGPDLMEFIRGHIFKILESDDTKKCQFDGSLSPVLSLLESMDEKE 90 Query: 74 EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENL 133 +E F+ SR + L D + ++ ++ +V +L + ++ + E Sbjct: 91 DESFVEASRVLSESLFDIMCDSVTIPAADLIVVSFQLYSVVHLALLKMNYKETYIHKEEE 150 Query: 134 D------INPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLG 187 + +D +DL E++ ++ G K+ FL Sbjct: 151 NEVNDIVKQRVMPMDGAKLTEAVIVDLLEYKVQLVEKKFEML----TGDKINYISERFLQ 206 Query: 188 ASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE-RQNVRQQVYSYCNEQLQAGEEIELKSLS 246 + K + + L + + D + + R + R ++ E+ + + + Sbjct: 207 CHADMAPKKKFQILNKVITDINNRYENEPLRNRLDARSKLREEFAEKNE----FRVNEIG 262 Query: 247 KELA---GVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGG-GLTINFDAM--L 300 + + F + + + A +T+++L G+ + + Sbjct: 263 DRIFGDSTEKKQEFDDRIERYDLQYDTFTVAKENTVKKLEYQILETDAGIEVKIPMEEYI 322 Query: 301 LGERIFWDPATD---TLTIKGT 319 + + T+ IK Sbjct: 323 TKDNVEILEEQGGGSTIIIKNI 344 >UniRef50_B1MWX9 FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) n=4 Tax=Leuconostocaceae RepID=B1MWX9_LEUCK Length = 340 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 107/337 (31%), Gaps = 36/337 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFSEES 61 + I LH L L+ + + V + + ++ + A + G + Sbjct: 11 MIIQHAILHILDTNTG---RLIASQAEMALDGAGVQDYIEQIVKKIYAGDVKKGTLTAHD 67 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 LA L DF + ++ D ++ G +L + L Sbjct: 68 YLATML-----DNADFSDMTTQLASKMFDIMSGQDAIRPGDILSFLATTDDGPLFGLIKL 122 Query: 122 SNLSSMR---------VNENLDINPTHY-LDINHADIVARIDLTEWETNPESTRYLTFLK 171 + + NL +N D +DLT + + +YL Sbjct: 123 NFSPRYAHVVAYQDNQMINNLVLNQAVLPAATQTVDEAILVDLTTQQYHLLEKKYLI--- 179 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G +VA F FL + K + + + V + D V + Sbjct: 180 --DGHRVAYFSEKFLAIQPETSVKENIQTIKRTVKKIADKY--DDLPAHEVLAKTQEVIY 235 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS--- 288 + L++G+ ++ ++++++ + + ++ + ++ + A + + K+ Sbjct: 236 DALESGQ-LDTNTIAEKVFSDNLTAKMQYQEKIAAQVIDKTIAIENKEKYQKKYRTQKFK 294 Query: 289 -GGGLTINFD--AMLLGERIFW-DPATDT--LTIKGT 319 G+ I+ ++ + + T L IK Sbjct: 295 LDSGIEISIPISVYQDPSKVEFVNNVNGTMSLVIKDI 331 >UniRef50_Q3XXH4 Putative uncharacterized protein n=1 Tax=Enterococcus faecium DO RepID=Q3XXH4_ENTFC Length = 197 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 18/184 (9%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPT-ETVVEMVAELHRVYSAKNKAYGLFSE 59 M + + + LH + + V L+ T E + + + + + S+ G +E Sbjct: 1 MDIYLKKAILHIIDRETGSP---VFSQKELDLTKEYIRDFLQKKIQKISSAQTKTGQLAE 57 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 ES + ++L++ ++ +F+ S A R D + A V Y V YL + Sbjct: 58 ESMIVESLKIAQE---NFVEASEAIVQRWFDIYQESEEAPSADVFVVLYELDTVMYLSLL 114 Query: 120 VLSNLSSMRVNENLD---INPTHYLD-------INHADIVARIDLTEWETNPESTRYLTF 169 ++ + D I+ L+ AD ++LT+W T + ++F Sbjct: 115 KVNYREAYTHFVEADEAGIDNRLILNRAILGAKTQKADEAFAVNLTDW-TYELIEKNMSF 173 Query: 170 LKGR 173 L + Sbjct: 174 LAKK 177 >UniRef50_B1BR40 Putative uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR40_CLOPE Length = 337 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 101/323 (31%), Gaps = 21/323 (6%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSE-E 60 ++I + +H L + + L +T + + + Y F E + Sbjct: 6 DINIKKAVIHILENDGTNPILNE--NLLELNEDTYKFLYKHIEKTLKDNKIKYARFVEKD 63 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 +EL + + L S+ +L + ++ ++ + Sbjct: 64 NELKDICYNILEDKISLLEGSKRIANQLYSIMRSNNTIPSCDLIIAEILTDIGPFIGILK 123 Query: 121 LSNLSSMRVN-ENLDINPTHYLDI----NHADIVARIDLTEW--ETNPESTRYLTFLKGR 173 + + + EN I+ + A I ++ E + + +KG Sbjct: 124 IDFIENYGHKIENSIISIAQSQGLPKSGQKIQKAAFIRPKKFSREFDLLVLDKMKKVKGE 183 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQ 233 + F FLG + N + + + + + + D E N+++ ++ Sbjct: 184 EEYAINYFIHQFLGCNLVTNERDMTKNFIDYTEKWIMDNIKDTTEALNIQK----LVKDK 239 Query: 234 LQAGEEIELKSLSKELAG--VSEVSFTEFAAEKGYELEESFPADRSTL-RQLTKFAGS-G 289 L+ EI++ +E+ ++ + E D+ + ++ K + Sbjct: 240 LKNDSEIDIYEFVEEIGDVSNNKQALIEKFENSNLT---EVKVDKDWVEKRFEKVVLNLD 296 Query: 290 GGLTINFDAMLLGERIFWDPATD 312 + I+ + ++ + Sbjct: 297 DKIKISMQEEDYADPNKFEIIKN 319 >UniRef50_C8NIQ7 Putative uncharacterized protein n=2 Tax=Granulicatella RepID=C8NIQ7_9LACT Length = 333 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 107/334 (32%), Gaps = 27/334 (8%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFSEES 61 + IN+ LH L K L+L + L+ + ++E + +L + G + Sbjct: 1 MLINEAVLHILDKNSGN---LLLSQAPLQLGDPFLIEYITKLVDKIKKVDPHIGQLASSE 57 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVL 121 L L FL ++ +L +A LF L ++ Sbjct: 58 PLLGYL---VDEGISFLEKTQQLADKLFALIAPAEEIGPADYLFFTGTSDTGGTLF-GMI 113 Query: 122 SNLSSMRVNENLDINPTHYLDINHADIVARIDLT----EWETNPESTRYLTFLKGR---V 174 S +V +D + + + T E S ++ + Sbjct: 114 RLDYSSKVTHFVDYEGEAVSNTILQNHAILPNATQKPSEAFIVDLSNGNYHLIEKKVVME 173 Query: 175 GRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQL 234 G+K A F FL + + K Q + + + V + + + QQ + QL Sbjct: 174 GQKTAYFSEKFLEITVPVTTKEQIKEIKKTVTHIAKKHDEEPYKALATTQQAIFH---QL 230 Query: 235 QAGEEIELKSLSKELAGVSEVSFTEF-AAEKGYELEESFPAD--RSTLRQLTKFAGS-GG 290 + +EI+ ++ ++ ++ A + E R+ +K Sbjct: 231 EEQDEIDAAAIFDKVFEEKPLAREAAQLAITEERVPEKIAVTNVPKYERKYSKQKFKLDN 290 Query: 291 GLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ I + + + + + D ++ IK Sbjct: 291 GIEITIPSEIYENKEMVEFINNPDGSVSVLIKNI 324 >UniRef50_B2TNZ2 Putative uncharacterized protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TNZ2_CLOBB Length = 343 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 118/342 (34%), Gaps = 34/342 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMV-AELHRVYSAKNKAYGLFSEE 60 ++INQ +H L + + VL + LE E V + + + + Y F + Sbjct: 6 DININQAVIHVLDRNATEP---VLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFKQG 62 Query: 61 SE-LAQTLRLQRQG-EEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLV 118 + + +T++ G +++F+ S+ +L + D ++ + + Sbjct: 63 TNLVKETVQGYLNGIDDEFIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMIGI 122 Query: 119 AVLSNLSSMR-----VNENLDINPTHYL-----DINHADIVARIDLTEWETNPESTRYLT 168 L + + ++E + + + + A I + + Y+ Sbjct: 123 LKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKIEKAAFI--KPYREDNLFNLYVL 180 Query: 169 FLKGRVGRKVA---DFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQ 224 K R ++F+ +L ++ N + + + +++ + ++Q +R Sbjct: 181 DKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD 240 Query: 225 QVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTK 284 + E+ E K + KE + +F + A E+ F D++ + + K Sbjct: 241 SFKNKVIEEDIINIEEVAKEVLKE--PGAADNFKVYMAGS---CEKEFGVDKTYVEKKVK 295 Query: 285 FAGS--GGGLTINFDAMLLGERIFWDPATD-----TLTIKGT 319 + + + ++ +D + + IK Sbjct: 296 KVRLNIDREIDLYISNVAYNDQDKFDIVPNGDGSVNMIIKNV 337 >UniRef50_D1BLS9 Putative uncharacterized protein n=3 Tax=Veillonella RepID=D1BLS9_VEIPT Length = 332 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 94/341 (27%), Gaps = 35/341 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETV--VEMVAELHRVYSAKNKAYGLFSEE 60 + IN+ AL V + L+ + + + + + G + Sbjct: 1 MQINKAALEIFDFTSS---LAVYSEHELKVGDQAIQDYIANHVVKAFKDPGARTGTLHDA 57 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 S + + L + G F+ S+ L + + + + C Y+ + + Sbjct: 58 SPVGKQLVDYKNGALKFIDLSKNLGESLFTYMKQATDSVVIDTIICE-AVTDTPYVCILL 116 Query: 121 LSNLSSMR--VNENLDINPTHYL---------DINHADIVARIDLTEWETNPESTRYLTF 169 + + D L A I+L+ + Sbjct: 117 CQAHDAFTHQLFSEDDGTLATELVSHKAVLPMPSQKLRAFASINLSNFSVRIFEP----- 171 Query: 170 LKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYS 228 KG +V+ D L +++ R + VD + D S Sbjct: 172 -KGEFDGEVSYILADKVLQLGTNQSSRDTVRKVKTIVDKVAQAHESDGVVE---LTTAKS 227 Query: 229 YCNEQLQAGEEIELKSLSKELAGVSE-VSFTEFAAEKGYELEESFPADRSTLRQL-TKFA 286 + + + ++ + +E+ + ++ P +R ++ Sbjct: 228 MIAKNAEVSDTVDPVRIVEEVFKANPIQQEAAKKELADADMLRPLPVNREFATKVGEHHK 287 Query: 287 GSGG-GLTINFDAMLLGERIFWD---PATDTLTI--KGTPP 321 G+ I+F + R F + TL I K Sbjct: 288 IKTDTGIEISFPVEYMKNREFIEIKTNDDGTLRIELKNINK 328 >UniRef50_Q24LD6 Putative uncharacterized protein n=1 Tax=Clostridium phage phi CD119 RepID=Q24LD6_9CAUD Length = 218 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 21/213 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNK-AYGLFSEES 61 + +++ +H L K + + L D + +V + S N +F++ S Sbjct: 1 MIMHKFIIHVLDKNSDTPI---LNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYS 57 Query: 62 E--LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + E FL S+ L D + + + C Y + + + Sbjct: 58 NNLIKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAIL 117 Query: 120 VLSNLSSMR---------VNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 L +S N + N + + I A I L+ +L L Sbjct: 118 KLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLS----GINDEYHLKVL 173 Query: 171 KGRVGRKV--ADFFMDFLGASEGLNAKAQNRGL 201 ++ + F +FL A++ + K + + Sbjct: 174 DKDAEKEEANSKFVTEFLNATKVKDDKYKTKMF 206 >UniRef50_Q1NFU7 Nucleoid-associated protein NdpA n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFU7_9SPHN Length = 140 Score = 90.4 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 5/136 (3%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLF-- 57 M +I +A+H L R + + L LL+ T+T + +++ ++ +Y+++ +K++G F Sbjct: 1 MVTEIIALAIHDL-NRSDAGYSVALSKKLLDVTDTTLRVISTVYELYNSRTSKSHGRFTT 59 Query: 58 SEESELAQTLRLQRQ-GEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL 116 +E S +R + E+DFL + L E K + GG V F H+R +++ Sbjct: 60 AEGSPTEGQIRAYVEAKEKDFLGLTGKMMDNLAREAGKKSASVGGHVFFAHFRRDGSDFM 119 Query: 117 LVAVLSNLSSMRVNEN 132 LV V+++ S + +N Sbjct: 120 LVTVVTDKLSAALTKN 135 >UniRef50_A8U7J1 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U7J1_9LACT Length = 333 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 110/337 (32%), Gaps = 32/337 (9%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVV--EMVAELHRVYSAKNKAYGLFSEE 60 + I + LH + + + L+ TE + A + +V + N G+ +E Sbjct: 2 IYIKEAILHIFDLNSNEPI---FSFAGLDLTEKFTFDYLHAMIEKVEDSDNMKTGVLAES 58 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 + L QT+ + DF+ ++ T + P +LF ++ +L + Sbjct: 59 NPLNQTVSTI---QTDFIETTKTLTEKFFSITKLNPEIPPADLLFVYFTLDEEPHLGLFK 115 Query: 121 LSNLSSM---------RVNENLDINPTHYLD-INHADIVARIDLTEWETNPESTRYLTFL 170 L+ S+ + L +N + ++L E + +++ Sbjct: 116 LNYSDSITHYVSYAEDTLTNQLIVNRSILPSARQAIQEGMVLNLGSMEYHVIEKKHM--- 172 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 +G K+ F FL + K + +AV + E V Sbjct: 173 IAELGEKIYYFTELFLEDKPQPSLKENISIIKKAVQKTSKAFD---DEEFQVLADTKDAL 229 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLR--QLTKFAGS 288 + + I+ + ++ L G ++V +F E + + +K Sbjct: 230 VQSMTEENVIDNQVIADTLYGDNQVKKEKFFEEIKELGYVDRAPAEVAVAGPKYSKQKFR 289 Query: 289 -GGGLTINFDAMLLGER--IFWDPATD---TLTIKGT 319 G+ ++ L + + + D ++ IK Sbjct: 290 LDNGIELSIPIELYRDPDVVEFINNPDGTTSVMIKNI 326 >UniRef50_A1JPY3 Putative uncharacterized protein n=2 Tax=Yersinia RepID=A1JPY3_YERE8 Length = 365 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 110/336 (32%), Gaps = 36/336 (10%) Query: 1 MSLDINQIALHQLIKRDEQ---NLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF 57 ++L+I++I +HQ+ +RD + + RD E + + + ++A + Sbjct: 4 LNLNIDRIIIHQVYQRDAEGQKKKPMQSRDFTRFSYEAMETFKQRVIEALGSSSRAVQME 63 Query: 58 SEESELAQTL-----RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL- 111 + A+ L R + ++ F S L E + GG V+ Sbjct: 64 ITNQKEAKDLPLIVERAVEEADDTFAVSSYDFATSLS-EAQQIRTIPGGIVVVFTGTQGH 122 Query: 112 -AVEYLLVAVLSNLSSMR--VNENLDINPTHYLDINHADIVARIDLTE--WETNPESTRY 166 A ++L + S+ V++ Y++ +R+ T +E + + Y Sbjct: 123 PAKKFLGIIKAETHSAYEKEVDDKTGEISLKYVEEVLLTPSSRLYKTAGFFEKDVYDSPY 182 Query: 167 L------------TFLKGRVGRKVADFFM-DFLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 + + G+ A +F DFLG + + F Sbjct: 183 SNLNDKWVVMVSDSQISKAGGKAAAKYFYADFLGCGYPQTSARTTKQFYDETKKFITALN 242 Query: 214 LDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAG-VSEVSFTEFAAEKGYELEE-- 270 + ++++ + + +Y ++ I + +F+E G Sbjct: 243 VSESKKSDYINSLTAYL--KVGISSSIGTAEFGGTYFEADVQDAFSEHMENAGIPTTSFT 300 Query: 271 -SFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERI 305 S L+ K + S + I+ + + I Sbjct: 301 KDIEHISSNLK-FRKVSFS-KNVKISAPSESFNDLI 334 >UniRef50_Q8GPS5 Putative uncharacterized protein ORF SG77 n=1 Tax=Pseudomonas aeruginosa RepID=Q8GPS5_PSEAE Length = 358 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 130/354 (36%), Gaps = 44/354 (12%) Query: 2 SLDINQIALHQLIKRDEQNL--ELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF-- 57 +L I ++ H + R + + + L + L+ ++V ++ + + ++ + Sbjct: 8 ALTIERMIAHTIFPRTKDGVLVKPQLSNDLIPLDVDSRDLV-QIRVTDALGSTSHAIEIN 66 Query: 58 ----SEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAV 113 + S + + + R + F+A S+ L D P GG ++ + Sbjct: 67 VEKSGDGSFMQKAAAIIRMNDLGFVAKSKVIASDLAD-AQTNPKWPGGILIVLTGKVGKN 125 Query: 114 EYLLVAVLSNLSSMRVNENLDINPTHYLDINH----------ADIVARIDLTEWET---- 159 + AV+ + N ++N + L + I ++++ ++ Sbjct: 126 QSPYAAVIKAETDKGFNIE-EVNGSVSLTLIKKMLLSQTQRLYKIGIVVEIS-YQAPVNN 183 Query: 160 --NPESTRYLTF---LKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 +PE+ RY F L + A +F + FLG + ++K Q R + F Sbjct: 184 LYSPENYRYFLFDHLLTSTETKSAAAYFYNAFLGMNIVGSSKYQTRKFYETTKAFINALP 243 Query: 214 LDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKE-LAGVSEVSFTEFAAEKGYE---LE 269 ++ +ER + + + S + + + + ++E L + + + G + Sbjct: 244 INSSERGALLEALRS---DLRSNKGTMSIATFAEEHLPKEQREEYKKTMSATGLPDTAMI 300 Query: 270 ESFPADRSTLRQLTKFAGSGGGLTINFDAM-LLGERIFWDPATD---TLTIKGT 319 + ++ LR+ + S G+ I A E + +P + IKG Sbjct: 301 KDLAYIKAKLRRPRRIDFST-GIKIQVPADVDFSEHVQVEPQAGGYTQVRIKGV 353 >UniRef50_Q48MF5 Conserved domain protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48MF5_PSE14 Length = 204 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAK-NKAYGLFSEE 60 + I +H + K+ + L RDS L ++ + M+A+L+ Y+AK KA+GLF E Sbjct: 84 MPIRHCIVHLIDKKPDGTPAVLHARDSELAESQAIENMLADLNESYNAKQGKAWGLFHPE 143 Query: 61 S---ELAQTLRLQRQGEEDFLAFSRAATGRLRDEL 92 S + L+ G DF AFSR A L+ + Sbjct: 144 SGAHPFSGWLKEYLDGGNDFTAFSRTAVEHLQKLM 178 >UniRef50_D2EVE6 Putative uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVE6_9BACE Length = 343 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 111/324 (34%), Gaps = 35/324 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE- 60 ++ +++I LH++ + E+ ++ S L E + +++ N+ Y LF + Sbjct: 6 NVILDKICLHKVGNKVEEEG-VIFSKSPLCVNENISKLLVNYFFANFKSNEYYNLFHDSD 64 Query: 61 ---SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY-----LA 112 +E+ ++ L S+ L ++ + +P +GG + +++ Sbjct: 65 LNLNEIFVYASNIFDNKDSILQQSKNIAKHLYNK-SMHPKINGGELYIAYFKDCVIDGQL 123 Query: 113 VEYLLVAVLSNLSS----MRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 + + + + ++ +IN ++IN D I + E + Sbjct: 124 TDGVGIFKSETKETYLRVFSTGDDFEINSDFGININKLDKGCLI----FNLEREKGFLVG 179 Query: 169 FLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFT-AEAQLDKAERQNVRQQV 226 + A ++ D FL + + ++ +F +D ++ ++ + Sbjct: 180 IVDNSSKGSEARYWKDEFLHVKQRNDEYYYTNNIISLCKNFVSKNKNIDNVQKADILNKA 239 Query: 227 YSYCNEQLQAGEEIELKSLSKELAGVSE--VSFT----EFAAEKGYELEESFPADRSTLR 280 S+ + + ++ S ++ F F E+ + + F + + Sbjct: 240 VSFFS----KNDFFDIDEFSNQIIQEQSLRDEFQSYKKTFEEEREVVIADDFTISENATK 295 Query: 281 QLTK----FAGSGGGLTINFDAML 300 + ++ I D + Sbjct: 296 KQSRSIKNIIKLDKNFKITIDGDI 319 >UniRef50_C4FVJ6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVJ6_9FIRM Length = 332 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 101/338 (29%), Gaps = 34/338 (10%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTET-VVEMVAELHRVYSAKNKAYGLFSEES 61 + I+ LH L K L L ++ + + + +L +S Sbjct: 1 MYIHHAILHILDKDAGN---LFLSQEAMDLSSPLIRTYLDKLLTKVQKAEPKRAKLEADS 57 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL-AVEYLLVAV 120 L +L+ + + S + +L D + LF Y + Sbjct: 58 ALWASLK---DDQTSLIDKSTSLADKLFDLIGPAEEIAAADYLFFEASDDHEQRYFGLIR 114 Query: 121 LSNLSSMRVNENLDINPTHYL---------DINHADIVARIDLTEWETNPESTRYLTFLK 171 L S + + + + L ++L + +Y+ ++ Sbjct: 115 LDYSSQVTHFLSAESQLVNQLVMHHAILPSPTQTPSEFFLLNLATGDYQILEKQYV--IE 172 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCN 231 G+ +++ L A Q + + +AV D + + + Q+V Sbjct: 173 GKRCLYLSE---RILEIVPPQAAPQQIKQIKKAVADTAKQFDQEPYQALATTQKV---IL 226 Query: 232 EQLQAGEEIELKSLSKELAGVSEVSFTEFAAE-KGYELEESFPAD--RSTLRQLTKFAGS 288 +QL+ I + ++ ++ + + E+ + + ++ K Sbjct: 227 QQLEEDHVINAEKITHQVFKDNLGAQDAAREALVKREVPTNIAVNNVPKYEKKYAKQKFK 286 Query: 289 -GGGLTINFDAMLLGER--IFWDPATD---TLTIKGTP 320 G+ + L + I + D ++ IK Sbjct: 287 LANGIELMVPTELYDDPEVIEFINNPDGSISVMIKNVD 324 >UniRef50_Q11XK8 Putative uncharacterized protein n=2 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XK8_CYTH3 Length = 347 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 117/341 (34%), Gaps = 39/341 (11%) Query: 1 MSLDI---NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLF 57 M +++ +I H + + ++ + + L E++ E++ + KNK Y F Sbjct: 1 MQIELANFEKIYTHFVGNKSDEEGITISKTPLQLNDESLKELLLNYF-THPFKNKEYNHF 59 Query: 58 SEE-----SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRY-- 110 E +EL + S L ++ +K+P GG + H+ Sbjct: 60 HHETDLNLNELYTYCSTIFADPDALYLQSINIAKHLYEQ-SKHPMIKGGELYVVHFNDCV 118 Query: 111 ---LAVEYLLVAVLSNLSSM-RVNENLDINPTHY---LDINHADIVARIDLTEWETNPES 163 + + + + + ++ D +DI D I + E+ Sbjct: 119 IDGESTDAIGLFKSETKETFLKIFPQGDGYEAVSDKGIDIRKLDKGCFI----INSEKEN 174 Query: 164 TRYLTFLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFT-----AEAQLDKA 217 + + A ++ D FL ++ + + F ++ K Sbjct: 175 GYKVCVVDQTNKSSDAQYWKDDFLKIVSRNDSFHYTQNYMNMCKSFVTDQMPETFEVSKT 234 Query: 218 ERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSE--VSFTEFAA--EKGYELE--ES 271 ++ ++ + +Y + E ++++ + ++ SF E+ ++ +++ + Sbjct: 235 DQIDLLNRSVNYF----KKNESFDMQAFTNDVIQDEGLIDSFKEYKNKFQEDHQMPMVDE 290 Query: 272 FPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATD 312 F +++ K S L NF + G++ + D Sbjct: 291 FEISTPAVKKYAKVFKSVLKLDRNFHIYIHGDKDLIERGRD 331 >UniRef50_A2CHE4 Putative isomerase (Fragment) n=1 Tax=Eubacterium hallii RepID=A2CHE4_9FIRM Length = 240 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 81/243 (33%), Gaps = 42/243 (17%) Query: 111 LAVEYLLVAVLSNLSSMRVN--------ENLDINPTHYL---------------DINHAD 147 YL + ++ S NL+ N ++ + Sbjct: 2 EGTIYLALLKMNYKESYTHEITASDSEGTNLNSNDSNIPVINTGIVKSRALLPSATSRIP 61 Query: 148 IVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDD 207 I+L+++ RY + G +++ +FL + K + L + +++ Sbjct: 62 EAVIINLSDYHIKLLEKRYE--INGEKAYYLSE---NFLICHTNIPPKKKLNILTRVINN 116 Query: 208 FTAEA-QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELA---GVSEVSFTEFAAE 263 + + D + + + ++ + +++ + +L + F E + Sbjct: 117 ISNKYDGADLKTKMDTKSA----LQKEYVDRKSFDVEEIGNKLFGKSPEKKSEFDEKMEQ 172 Query: 264 KGYELEESFPADRSTLRQLTK-FAGSGGGLTINFDAMLLGERIFWDPATD-----TLTIK 317 + + + +T+++L K F + G+ I+ + ++ TD T+ I+ Sbjct: 173 YDLQYDNFTVTNENTVKKLEKQFMVTDSGIEISIPMETYNKLANFEVQTDVTGKSTIIIR 232 Query: 318 GTP 320 Sbjct: 233 NID 235 >UniRef50_Q03L76 Uncharacterized conserved protein n=72 Tax=Streptococcus RepID=Q03L76_STRTD Length = 303 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 93/305 (30%), Gaps = 22/305 (7%) Query: 27 DSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATG 86 +S +E T + E + + G F E+ + D + S + Sbjct: 3 ESPIEITPRLDEYFRKKLSKVFSDEAKRGYFDTENVFISHI------GNDLMESSVKISK 56 Query: 87 RLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHA 146 ++E ++F + EY ++ S+ + +P L N+ Sbjct: 57 LWKEEFVISEDQKTNDLVFIQFDKEGQEYFAFLRIALKDSLVHSLGNSQHPIQ-LSQNNL 115 Query: 147 DIVARIDLTEWETNPESTRYLTFLKG-RVGRKVADFF-MDFLGASEGLNAKAQNRGLLQA 204 A+ N S +Y K + A++F + L + K + + Sbjct: 116 PSAAQTPDEALVINRSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEDT 175 Query: 205 VDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEK 264 D N + ++ S L+ +E+ + L+ +L + + F E Sbjct: 176 AQKIAENFNQDD---FNFQGKMKSAIFNNLEEDQELSPEKLADQLFDNNLTARLTFVDEL 232 Query: 265 GYELEESFPAD----RSTLRQLTKFAGS-GGGLTINFD--AMLLGERIFWDPATD---TL 314 + E +++L S G+ + + + + D ++ Sbjct: 233 KEAIPEPISVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDADSVEFIQNPDGTYSI 292 Query: 315 TIKGT 319 IK Sbjct: 293 LIKNI 297 >UniRef50_C6XXB3 Putative uncharacterized protein n=3 Tax=Sphingobacteriales RepID=C6XXB3_PEDHD Length = 351 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 115/329 (34%), Gaps = 37/329 (11%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEESE 62 + ++++H++ + E+ ++ SL+ + ++ + Y N+ Y + Sbjct: 8 SLAELSIHRIGNKSEEEFYVLSEKSLMIKDPMLSNLLQQYFLGPYEKVNEVYRFIHPNGD 67 Query: 63 L-----AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA----- 112 L + E F S+ L D ++ +P G + ++ + Sbjct: 68 LNLNEAYHFAAAIFEKGETFHENSKQLAKYLYD-VSGHPKIKPGELYVAYFENVQIEGEL 126 Query: 113 VEYLLVAVLSNLSSM-RVNENLDINPTHY----LDINHADIVARIDLTEWETNPESTRYL 167 + + + S +V D Y ++IN D I + T+ + Sbjct: 127 HDAIGIFKSETKESYLKVFPEQDGFGLSYEQEAININKLDKGCLI----FNTDKAEGFRV 182 Query: 168 TFLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFT-----AEAQLDKAERQN 221 + A ++ D FL + Q +L +F E ++ KA++ + Sbjct: 183 AVIDQTNRSAEAVYWKDEFLKLKIRNDNFNQTSSVLGVYKNFVTEKLDEEFEISKADKID 242 Query: 222 VRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEV------SFTEFAAEKGYELEESFPAD 275 + + Y E+ E +L+ S E+ G +E F E + +SF Sbjct: 243 LLNKSMKYFKEK----ESFDLEEFSNEVIGNAEGIASFKNYKKSFEEEFDQPIPDSFDIS 298 Query: 276 RSTLRQLTKFAGSGGGLTINFDAMLLGER 304 + +++ + S L NF + G++ Sbjct: 299 GAAVKKQARVYKSVLKLDKNFHIYIHGDK 327 >UniRef50_A6N5K4 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=A6N5K4_PSEAE Length = 153 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 3 LDINQIALHQLIKRDE-QNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 + I +H + K+ + L RD+ L ++ + ++A+L+ Y+AKNKA+G F ES Sbjct: 1 MPIKHAIVHLIEKKPDGTPAVLHARDAELGDSQAIENLLADLNESYNAKNKAWGFFQGES 60 Query: 62 ---ELAQTLRLQRQGEEDF 77 + L +G+ DF Sbjct: 61 GAYPFSGWLGEYLEGDRDF 79 >UniRef50_C7G546 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G546_9FIRM Length = 328 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 37/326 (11%), Positives = 99/326 (30%), Gaps = 37/326 (11%) Query: 9 ALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE----SELA 64 +H + + + + + E + + + + Y E +E+ Sbjct: 2 IIHNVGNKVKGESLEISTEICDANNEVTNQYLKQFFFSTFKFDVTYRFVHETDIAMNEIY 61 Query: 65 QTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY-----LLVA 119 ++ + +F S L E++ +P G + + + ++ + + Sbjct: 62 NYVKHIFENPSEFYEQSVNIAKHLY-EVSVHPNIKAGELYIVYLQNCIIDDNVTDAIGIY 120 Query: 120 VLSNLSSM-RVNENLDINPTH---YLDINHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 + +VN N ++ D I N + Y ++ R Sbjct: 121 KSESKDYYLQVNSNGKRYDIECQQGINPKKLDKGCLIF------NLSDSNYKVYIVDRNI 174 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDF-TAEAQLDKAERQNVRQQVYSYCNEQL 234 + +FL E N +L++ + + ++ +R + Y Sbjct: 175 NDAMYWKKNFLMIEEEKNEYTNTAKVLKSCKKYIAKKENIEPEKRLELMNNSVEYF---- 230 Query: 235 QAGEEIELKSLSKELAG--VSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS---- 288 + EE +L+ ++++ F + Y+++ F + + ++ K Sbjct: 231 ENNEEFDLEKFTEKVFDNQEESDKFKVYI--DSYDVDNKFSISSNAVTKIKKTIKKCIKL 288 Query: 289 GGGLTINFD--AMLLGERIF--WDPA 310 + I F + I +D Sbjct: 289 DDNVEIKFSDTVDDIDNLIEKGYDRE 314 >UniRef50_B9Y3W4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3W4_9FIRM Length = 327 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 26/332 (7%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 +++ LH L + LEPT+ + + + R+ + S + Sbjct: 1 MELKTAILHSLDMNLGMPVV---SQVELEPTDFLNTYLEK--RLQRLAGSEHCRTSTTAS 55 Query: 63 LAQTLRLQRQGEED---FLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 + + D F F+ +L + + VLF L V Sbjct: 56 IGGVSLDEVLKASDWQAFYEFTLQLLEKLFN-YRQSNGGQSADVLFALLEIDRHLSLYVG 114 Query: 120 VLSNLSSMR--VNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRK 177 +L SS+ ++++ ++ A ++ +E + LT L + + Sbjct: 115 ILDYRSSLIHHLSQDERQTRLELVEYQTTLPGASAGVS-FEFCTDLFTGLTQLIEKKEKG 173 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKA-ERQNVRQQVYSYCNEQLQA 236 L + K + + + V + L + R +Q+V E+ Sbjct: 174 FTPLSELLLNQQFEMTPKEKIKAAQKIVQEIHPSDDLTEMNRRVEFKQKVAESLQEK--- 230 Query: 237 GEEIELKSLSKELAGVSEVS-FTEFAAEKGYELEES-FPADRSTLR-QLTKFAG-SGGGL 292 EE+ L+ + +E+ + F A + L++ S +L K + G+ Sbjct: 231 -EEVNLEEVFEEIYVDDPSTLFEAKAKLQDRGLDQQRMVVTSSAYDAKLKKQKLVTDSGI 289 Query: 293 TINFDAMLLGER--IFWDPATD---TLTIKGT 319 +I + ++ + + D ++ +K Sbjct: 290 SIVLPIDYMHDQSHVEFITNPDGSLSILLKNI 321 >UniRef50_D2BRL6 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech586 RepID=D2BRL6_DICD5 Length = 335 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 120/333 (36%), Gaps = 33/333 (9%) Query: 5 INQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE--LHRVYSAKNKAYGLFSEE-- 60 + ++ LHQ+ R + LVL D T+++ ++ L + S KN+ + Sbjct: 8 VKEVILHQVGNRLREEP-LVLADKCFAITDSISNVILGGYLRGIVSDKNQYVLSHESDMA 66 Query: 61 -SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHY---RYLAVEYL 116 +++A + F S+ L +P G + + + V Sbjct: 67 LNDVAHHASGFFSKKISFEDLSKNLATHLYSS-THHPNIASGDLFVILFDKLKVGDVYRS 125 Query: 117 LVAVLSNLS-----SMRVN-ENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 + + + S S R++ + + + ++ + D A I + + Sbjct: 126 AIGIYKSESKQQYLSARIDGKTQQLEVSSGINPDLIDKGALI---------VDGSDIIYA 176 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 R+ + + DFL A + N ++ ++ E ERQ ++V + C Sbjct: 177 IDRLSSRTKYWVDDFLNAKQIPNESTKSAVATGLIEK-VRENIESPVERQEFCREVIALC 235 Query: 231 NEQLQAGEEIELKSLSKE-LAGVSEVSFTEFAAEKGYELE-ESFPADRSTLR-QLTKFAG 287 +++ + E E++ LS++ ++ E E+ ++ + +L+ +L + Sbjct: 236 SDKDKVLGE-EIRELSEKYVSPDVWDKELERLVERKGLVDTKDISVSARSLQTKLNRLFN 294 Query: 288 S---GGGLTINFDAMLLGERIFWDPATDTLTIK 317 G +++ L + + ++ I Sbjct: 295 RVNLGNDISLIIPGSFLFSDVEFKLDGKSIKIN 327 >UniRef50_A0AG24 Complete genome n=20 Tax=Listeria RepID=A0AG24_LISW6 Length = 343 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 100/337 (29%), Gaps = 36/337 (10%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE--- 60 I ++ +H + + V + L + + + +A + K++ + E Sbjct: 8 KITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKFTHETDLD 67 Query: 61 -SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFV--LFCHYRYLAVEY-- 115 +E+ EE+FL S+ L E +P G V F + ++ Sbjct: 68 FNEVRTFASNMFLQEEEFLDESKKILEHLYSE-TTHPNIKSGDVWIFFIEGCVVDGDFTN 126 Query: 116 -LLVAVLSNLSSMRVNE----NLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFL 170 + + + N N+ I + D I + + ++ + L Sbjct: 127 GIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTDLDKGCLI----FNVDHDTGNKVLIL 182 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + FL + + K G ++ D+ + + ++ N + Y Sbjct: 183 DRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTEYL 242 Query: 231 NEQLQAGEEIELKSLSKELAGVSEV------SFTEFAAEKGYELEESFPADRSTLRQLTK 284 E + + ++ E F E E+F D +L+K Sbjct: 243 AG----EETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSK 298 Query: 285 FAGSG----GGLTINF-DAMLLGERIF---WDPATDT 313 +++ D L E F +D Sbjct: 299 KIRKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKGK 335 >UniRef50_C7M8L8 Putative uncharacterized protein n=3 Tax=Flavobacteria RepID=C7M8L8_CAPOD Length = 352 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 105/322 (32%), Gaps = 35/322 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE 60 + +I +++H++ + L L + + ++ ++ E + + K + Y + Sbjct: 6 TTNIETLSIHRVGNLSKGEP-LFLSEKPYALNDEIIGLLKEYFFKPFREKEENYFHLVHD 64 Query: 61 SEL-----AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFC--HYRYLAV 113 +++ Q + + E S+ L ++ + +P G V H YL Sbjct: 65 TDVEFNELYQLVTPIFEDESSIHEQSKKIAQHLYNQ-SNHPHIKSGEVYVALLHDSYLDN 123 Query: 114 EYL---LVAVLSNLSSMRVNEN----LDINPTHYLDINHADIVARIDLTEWETNPESTRY 166 E + + +S E L++ ++I+ D I + Y Sbjct: 124 EKVKAVGIFKSEMRNSFLQFEEQANQLEMIIQEGVNIHRLDKGCIIF-----NVNKEDGY 178 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN---VR 223 + +FL ++ + L+ DF + L +++ Sbjct: 179 KILSIDSNRYDTKYWLENFLNVDALIDDNFYTKKYLKFSQDFAKDVILPAEDKKEEVLFM 238 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEK--GYELEE--SFPADRSTL 279 + +Y + E + + + F + EK Y++E+ +FP + Sbjct: 239 NRAINYFAKNDDFEETSFMNEVFE--NPELIPEFKHYKVEKGPKYQIEDVSTFPIVNKAV 296 Query: 280 ----RQLTKFAGSGGGLTINFD 297 +++ + I D Sbjct: 297 SDVRKKIKNVIDLDTNIQIRMD 318 >UniRef50_B5F983 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F983_SALA4 Length = 378 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 112/341 (32%), Gaps = 28/341 (8%) Query: 2 SLDINQIALHQLI-KRDEQNLELVLRDSLLEPTETV-VEMVAELHRVYSAKNKAYG-LFS 58 +L+I + +H++ + + ++ ++++ + + L +V S +K Sbjct: 37 NLNITDLIIHRVYLPGQQAHFDVEHSNNIIPLSGKAKQTLEQRLTKVLSKGSKCIEMDIV 96 Query: 59 EESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYL-L 117 E+ L + L GEE F++ ++ +L + G ++ Y + + Sbjct: 97 EDDPLEKIHTLHDAGEELFVSKTKDIANKL-GKAQTSKKHPEGVLVIVRCSYGITKKIRA 155 Query: 118 VAVLSNL--SSMRVNENLDINPTHYL------DINHADIVARIDLTEWETNPESTRYLTF 169 VA++ ++ YL VA + Y F Sbjct: 156 VAIIKAELHEGFTSTVKDNVATIGYLTNLFLTPEQKLYKVAFFSEKTRMSTLNKNAYEVF 215 Query: 170 LKGRV------GRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVR 223 L A F+ FLG S ++ R + +D+ ER ++ Sbjct: 216 LFDNNLTSKDDSGAAAYFYKAFLGLSISADSSRLTRSFYEITEDYINATSSSLEERIDLS 275 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAG-VSEVSFTEFAAEKGYELEESFPAD----RST 278 + Y + E I ++ + F EK + SF D ++ Sbjct: 276 SALRIYI--KAGQSEIIGTNDFAENYMSVEKRDDYIMFCEEKDPVIS-SFKKDDTLIKNR 332 Query: 279 LRQLT-KFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKG 318 ++ T KF+ + + D E I D T+ I G Sbjct: 333 IKNSTFKFSNEVKIIYPSIDGNTPCEIIERDDKYTTVKING 373 >UniRef50_A4BWJ4 Putative uncharacterized protein n=3 Tax=Flavobacteriales RepID=A4BWJ4_9FLAO Length = 350 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 97/330 (29%), Gaps = 35/330 (10%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEESE 62 +I + LH++ + V + L+ + +++ L + + ++Y FS ++ Sbjct: 8 EITKCILHKVANKFNSGKN-VFSEDLIRFDQESYDLMKSFLLKPFGTLTQSY-RFSHHAD 65 Query: 63 LA-----QTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF----CHYRYLAV 113 + + E F+ +S+ L ++ G ++ Y+ + Sbjct: 66 VRLNELNNYASEIFKEENSFIEYSKNIVNHLYEQSNSAQIKTGDVLIVLIEGIEYKDVLT 125 Query: 114 EYLLVAVLSNL-----SSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLT 168 E + V + N + + N++ D+ + D I ++ + Sbjct: 126 EAIGVFKIENKIDFFQTYLDDNKSFDMVVQKGISTKRIDKGCLI-----LNTSDTEGTIV 180 Query: 169 FLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE---AQLDKAERQNVRQQ 225 + DFL + + + L+ +F+ E +L ++ N Sbjct: 181 LSVDNNNYDAQYWIKDFLSIKLADDYNSHTQNYLEMCKEFSEEVIKPELGMQQQGNFLAN 240 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAA----EKGYELEESFPAD----RS 277 Y E + + + F + + +F + Sbjct: 241 TVDYFKENEAVDYATFKDEVFE--DEKHKEQFDTYKKHFETLNDVLIRNNFDVSGVVLKK 298 Query: 278 TLRQLTKFAGSGGGLTINFDAMLLGERIFW 307 +L ++I D + Sbjct: 299 EKNKLKTEIKLDTNISIKLDVDAPEAASEY 328 >UniRef50_B0N0D5 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N0D5_9FIRM Length = 335 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 116/338 (34%), Gaps = 32/338 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTE-TVVEMVAELHRVYSAKNKAYGLFSEE 60 ++ I++I +H L + ++ D+ + TE T ++ + + E Sbjct: 4 TIIIDKILIHMLDLEHSK---IIYSDTFINLTEGTTEYYDKKIEKCLENSGIKELVTGSE 60 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 L Q + + E F S T L D K ++F + +++L+ Sbjct: 61 HHLLQAGKKMIESNEAFKEESIKITQDLFDLCTKIEEMPNANLMFVELKVDGKKFVLIIK 120 Query: 121 LSNLS--SMRVNENLDINPTHYLD-------INHADIVARIDLTEWETNPESTRYLTFLK 171 L+ + + EN I +++ + I++ + + RY+ + Sbjct: 121 LNYKTMPMSLIEENDGIRSIRFINQQILPNKTTAVEEAIIINVEDNILSIIEKRYM--ID 178 Query: 172 GRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQ-LDKAERQNVRQQVYSYC 230 G+ G + + ++ L K + + + V +E ++ V++++ Sbjct: 179 GKPGYYLNE---QYIKGEPKLTDKQKMSIVNKVVKKVDSEYNVVEGDPLPLVKKELVDLV 235 Query: 231 NEQLQAGEEIELKSLSKEL---AGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAG 287 + ++ L+K++ + + G E ++ +L ++++ Sbjct: 236 MDHR----PVKPMELAKKVMGNDYNATEEVELIMRDLGIEEDDEIVNVPVSLDRMSRCKL 291 Query: 288 ---SGGGLTINFDAMLLGERIFWDPATD---TLTIKGT 319 + +N + L G I + + +K Sbjct: 292 VLDDDRIIELNVEDYLEGVDIVKEMDEGGMTRIILKNI 329 >UniRef50_B1HVG3 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HVG3_LYSSC Length = 335 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 30/324 (9%), Positives = 90/324 (27%), Gaps = 23/324 (7%) Query: 4 DINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESEL 63 + ++H L + E L ++ + + +E+ Sbjct: 8 KLAHYSIHFLSETTLILGEEDYIQPELMLEAAFTQLAFSKVELEQQYEFFHETDIALNEV 67 Query: 64 AQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYR-----YLAVEYLLV 118 + + + FL S+ L ++++P G + + + + + Sbjct: 68 FTYSKKIFEQDSSFLEQSQNMAKHL-HSVSQHPNIKSGELFIGLFENCFLLNEVKKVIAI 126 Query: 119 AVLSNLSSM----RVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRV 174 + N + I+ +++ + +A I E + F+K + Sbjct: 127 VKIDEKEMFLDVKNDNNKMIIHGVDGINVKKINNMAII-----VDMGEEKPPVVFIKTKR 181 Query: 175 GRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFT-AEAQLDKAERQNVRQQVYSYCNEQ 233 + + FL L + E E+ + Y + Sbjct: 182 KEDIVYWQERFLNIKAADEHYHNTDLALNECKKYILKEENYSNTEKLGFLNKTLDYFRNE 241 Query: 234 LQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLT 293 + + ++++ + + + +S A ++ + + Sbjct: 242 DEFQVDHYIETVFDQADATQKDILVNAVKPYETVISDS--ALEKAEKKYKRKIKLDSNIE 299 Query: 294 INFDAMLLGE-----RIFWDPATD 312 I + + + + +D AT+ Sbjct: 300 IQVNIQHIDQIDELIEVGYDEATN 323 >UniRef50_A6H052 Putative uncharacterized protein n=13 Tax=Bacteroidetes RepID=A6H052_FLAPJ Length = 352 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 105/322 (32%), Gaps = 35/322 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFSEE 60 + I +++H++ +N ++ L ++ + ++ ++ E + + K + Y F+ E Sbjct: 6 NTHIESLSIHRVG-NVSRNEDMFLSENPYGLNDEIMPLLKEYFLKSFREKEENYFQFAHE 64 Query: 61 -----SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEY 115 +E+ + + S+ T L ++ + +P G V H ++++ Sbjct: 65 VDLEYNEMFKFATEIFENPSKTHDISKKITKHLFEQ-SNHPHIKNGEVYVTHLTNISIDN 123 Query: 116 -----LLVAVLSNLSSMRVNEN----LDINPTHYLDINHADIVARIDLTEWETNPESTRY 166 + + + E L++ +++N D I + Y Sbjct: 124 NVVDAIGIFKSELKADFLQFEEKGTTLEMILQQGINLNKLDKGCLIF-----NYKKEEGY 178 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN---VR 223 + FL + + + L+ DF + +++ Sbjct: 179 KILTVDSNRYDARYWLEHFLSVDAFQDENFKTKKYLKFCQDFAKDVVFPAEDKKEEVMFM 238 Query: 224 QQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAE--KGYELEE--SFPADRSTL 279 + ++ + Q E L + F + + + Y +E+ SFP + + Sbjct: 239 NRAVNHFAKNDQFEESNFLNEVID--NPDLISEFKNYKVDKGEKYSIEDLTSFPIANAAV 296 Query: 280 ----RQLTKFAGSGGGLTINFD 297 R + + I D Sbjct: 297 SDARRTMKNVINLDTNIQIKLD 318 >UniRef50_C9R789 Putative phage associated protein n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R789_AGGAD Length = 362 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 109/345 (31%), Gaps = 35/345 (10%) Query: 2 SLDINQIALHQLIKRD--EQNLELVLRDSLLEPTETVVEMVAE-LHRVYSAKNKAYGLFS 58 +L + ++ H + + D + ++ L+ ++ E L +V + +K+ + Sbjct: 5 NLQVKKVISHFIHQPDYEGNPIPAIISQELISLDTLAKSLLTERLVKVLGSDSKSVEMQI 64 Query: 59 EESELAQTL----RLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVE 114 ++++ + +F+ S+ +L G ++ + A Sbjct: 65 SDAQIGSCFDYINKALINNRSNFIEQSQNIANKLASIQNSDRKYPSGLLIVIYATVTASN 124 Query: 115 YLLVAVLSNLSSMRVNENLDINPTHYLDINHA------------DIVARID--------- 153 + ++ + LD+N T + +N + I Sbjct: 125 LDCIIIIKAEEQSAFQKILDVN-TSSISLNMLNDLFLTPQSKLYKVGVFIKNSNANAVDS 183 Query: 154 LTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQ 213 L E T + Y + + F+ FLG S N K + + F Q Sbjct: 184 LEEITTTYTAILYDSNFTKDLKNAAKYFYSLFLGLSIPENDKIITQKFYEETRKFINNMQ 243 Query: 214 LDKAERQNVRQQVYSYCNEQLQAGEEIELKSLS-KELAGVSEVSFTEFAAEKGYELEESF 272 + ++ ++ +Y+ + I + S L + ++ ++ + SF Sbjct: 244 ISSEKKIELQNALYTEL--KTNTSPTISTATFSENYLDEDEQDNYLSVMSDANIP-DRSF 300 Query: 273 PADRSTLRQLTKFAGS--GGGLTINFDAMLLGERIFWDPATDTLT 315 D S + + K G+ I + +I +L Sbjct: 301 TKDISLIENMLKLRRYHFSSGVKIISPSESDLVKIISTDEEISLI 345 >UniRef50_C2M5X5 Putative uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M5X5_CAPGI Length = 374 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 75/262 (28%), Gaps = 25/262 (9%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRV-YSAKNKAYGLFSEE 60 + I +++HQ+ ++ L L + + ++ E + K + + F + Sbjct: 6 NTQIESLSIHQVG-NMQKGENLFLSQQPYALDDQITSVLKEYFLKPFREKEENFMRFVND 64 Query: 61 -----SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFC---HYRYLA 112 +E+ + + S L ++ + +P G + H Sbjct: 65 TSLEFNEMFAIVTEIFENPSTIHTHSLRIAQLLYEQ-SNHPHIKSGELYVAYLTHITLDN 123 Query: 113 VEYLLVAVLSNLSSMRV------NENLDINPTHYLDINHADIVARIDLTEWETNPESTRY 166 + + + + LDI +++N D I E Y Sbjct: 124 TKVEAIGIFKSEMKQNFLQFEQGQNQLDILLEEGVNVNKLDKGCLIF-----NVNEEEGY 178 Query: 167 LTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQN---VR 223 + FLG + + L+ DF E L +Q Sbjct: 179 KILSVDSNRYDTKYWTEQFLGIDALADDAFFTKKYLKMCQDFAKEVVLPAEGKQEEILFM 238 Query: 224 QQVYSYCNEQLQAGEEIELKSL 245 + ++ + + E L + Sbjct: 239 NRAVNHFAKNDEFEETHFLNEV 260 >UniRef50_C2G2V7 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2G2V7_9SPHI Length = 352 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 120/345 (34%), Gaps = 52/345 (15%) Query: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVE---MVAELHRVYSAKNKAYGLFSEE-- 60 ++++H++ + Q+ +L D + E V ++ ++ N+ + F Sbjct: 10 EKLSIHRVGNKA-QDEFYILSDEPVNLGEDEVMPQLLMQYFLSPFAKLNEVHRFFHPNEE 68 Query: 61 ---SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCH---YRYLAVE 114 +E+ + + + F S+ + L E++ +P G V H + + Sbjct: 69 LGLNEVYHFTKQFFEDKLPFHELSQQVSKHLY-EVSGHPKIKAGEVYVVHLKNVQMEGED 127 Query: 115 YLLVAVLSN------------LSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPE 162 + + + + + +++ ++IN D I + + Sbjct: 128 HQAIGIFKSENKETYLKVYPEKGAFKLD-----YEAEAININKLDKGVLI----IDVEED 178 Query: 163 STRYLTFLKGRVGRKVADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEA-----QLDK 216 + + ++ A ++ D FL + Q L+ +F E +++K Sbjct: 179 EGYKVLVVDQTNKQQEAVYWKDEFLKLRIRNDNFNQTGNYLKVYKNFVNEKLEDVFEMEK 238 Query: 217 AERQNVRQQVYSYCNEQLQAGEEIELKSL-----SKELAGVSEVSFTEFAAEKGYELEES 271 A++ ++ + +Y E+ + +E + + + L F + E + + Sbjct: 239 ADKIDLLNRSMNYFKEKEEFVQEEFEEQVLGNPQAISLFKEYRGEFED---EFETPFQSN 295 Query: 272 FPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIF----WDPATD 312 F ++++ S L NF + G+R + +D Sbjct: 296 FDIADKAVKKMEASYKSVLKLDKNFHIYVHGKREYLEKGFDEEKG 340 >UniRef50_C8NZW1 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZW1_ERYRH Length = 326 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 113/350 (32%), Gaps = 57/350 (16%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLE--PTETVVEMVAELHRVY-SAKNKAYGLFSE 59 ++I++ +H L + ++L + L ++ V +A+L + + S+ + + Sbjct: 5 MNIDKGVIHSLDR---DLQSMILSEKPLNFNTSKDVEPFIAKLAKAFQSSPTASKAKLNS 61 Query: 60 ESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVA 119 S + +F+ ++ + D + +LF L + Sbjct: 62 GSPFLSLIGT----PINFIEETQKLAKQWFDHHIATMTVESSNLLFAMVDMGDFVSLAMF 117 Query: 120 -VLSNLSSMRVNENLDINPTHYLDINH--------ADIVARIDLTEWETNPESTRYLTFL 170 VLS +++ +N + ++LT ET L Sbjct: 118 EVLSKNGYIKITQNEHGLENALVHNQAILPATFASVKNAFMVNLTTGET----------L 167 Query: 171 KGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYC 230 + + L N+K + + V + + E +QV Sbjct: 168 VKFQDIRYRELLETILDCEIIANSKTSFQVVDTLVGTISEVREDSHFENIVKAKQV---I 224 Query: 231 NEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFP------------ADRST 278 + + +EIE K + KE+ F F+ E+ ++ +F +R+ Sbjct: 225 TDNVDFFDEIEPKQILKEV-------FDTFSEEEERLIDATFEQEHVQDMINLKMVNRTQ 277 Query: 279 LRQLTKFAGSGGGLTINFDAMLLGERIFWDPATD-----TLTIKGTPPNL 323 + + + G+ I +L + +TD ++ +K L Sbjct: 278 AAKKHRIV-TESGIEIILPLDILDISDVVNISTDINGQVSIELKDIGKIL 326 >UniRef50_B2FTI0 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=B2FTI0_STRMK Length = 376 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 111/372 (29%), Gaps = 56/372 (15%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 L I ++ H + E + L + ++P + V V + + AY F + Sbjct: 12 LTIERMIFHVVDPASESPVFL----AEVKPPQCVDFFVERVKETL--RGAAY-EFLPGAG 64 Query: 63 LAQTLRLQR---QGEEDFLAFSRAATGRLRDELAK-YPFADGGFVLFCHYRYLAVEYLLV 118 + L + ++ F+ S R ++++ + A G +LF ++ V Sbjct: 65 IPSLLYRALPSQKAKDGFIKASHDLAARFKEKVKQDKRLAPGVLMLFVLKTEGDTRFVAV 124 Query: 119 AVLSNLSSMRV----NENLD---------------INPTHYLDINHADIVARI------D 153 + + +E + + T D A I + Sbjct: 125 IKYEHQQVVSYSYIKDEEGNLILDGDGNPVPDLQTLVETFTKDRKAMQKSAVIRFHKNEN 184 Query: 154 LTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQ-AVDDFTAEA 212 + S + GR R F +FL L + L AV+ A Sbjct: 185 IESGGDFQSSIVVIDHSSGRY-RDATQHFANFLDIRRALEPVELTKRLEDAAVESIKAHK 243 Query: 213 QLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVS------FTEFAAEKGY 266 E ++ +L+ + + + + F A K Sbjct: 244 SEVPPEVAKAPKRFVRAAMSRLEGFDFEKPEEFLGAVLQGVAPEAAILKTFKSKLANKNI 303 Query: 267 ELE----ESFPADRSTLRQLTKFAGSGGGLTINFDAML-LGERIFWDPATD---TLTIKG 318 E E + R++ + G+T+ F A + + + +TI+ Sbjct: 304 STEAFKFEGATPPPAEYRRVV----TNEGITLLFSAGHEENKNVEIKTEGNGGVEITIRS 359 Query: 319 TPPNLRDQLQRR 330 T D+L++ Sbjct: 360 TGLERNDELEKM 371 >UniRef50_C8RXK5 Putative uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXK5_9RHOB Length = 339 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 100/318 (31%), Gaps = 23/318 (7%) Query: 3 LDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESE 62 + I ++ LH + + + ++ E + +A + V S+ F++ S Sbjct: 1 MAIRRMVLHVVGRE-----RPIALQPEIDGVEHLEFFLARIREVSSSP---VHEFADLSP 52 Query: 63 LAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYL-AVEYLLVAVL 121 + + E DF A + R E +DG F + A + + Sbjct: 53 TKALIEKIARNEVDFAAGAFELARR-FSEAHDGSSSDGAFFVVELGCGDPATAFFCLIKY 111 Query: 122 SNLSSMRVNENLDINPTHYLDINHADIVARIDL--TEWETNPESTRYLTFLKGRVGR-KV 178 S + + + + N + I T TN ++ ++ + + Sbjct: 112 DYRSVVELAHDGERNILREIVQAFVREKRAIQKCCTVRVTNGDAEAAVSAVDRMGNAPDL 171 Query: 179 ADFFMDFLGASEGLNAKAQNRGLLQAVDD--FTAEAQLDKAERQNVRQQVYSYCNEQLQA 236 +F +L + + + + L +A+ + + + Q Sbjct: 172 TRYFAVYLDVTRHRDQEELSTKLSEALRKTFIACSNDVPNLNLGDAVGIAKGILQRREQV 231 Query: 237 GEEIELKSLSKELA-GVSEVSFTEFAAEKGYELEE------SFPADRSTLRQLTKFAGSG 289 E+ L+++ + E +E + L +F D R + Sbjct: 232 DEDAVLEAVRIAVGNPEDESVRSEIDKKATRALRTANLEGLTFRPDDKFFRTRPRRKLKT 291 Query: 290 -GGLTINFDAMLLGERIF 306 +TI++ L G+ +F Sbjct: 292 QEDVTIDYPGELEGKAVF 309 >UniRef50_A3LAW2 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LAW2_PSEAE Length = 350 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 97/318 (30%), Gaps = 25/318 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 SL I ++ LH + + E + ++ + +A +F S Sbjct: 11 SLKITRMILHVVGTK-------HFEAMPERALEEEAFFIGKIVDMAAAP---VFMFKAVS 60 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLF-CHYRYLAVEYLLVAV 120 + + G+ F+ +++ + ADG ++F + V+ + Sbjct: 61 TTRKEIEAIAAGDTSFVDGAQSLAAS-FNRQHVVGSADGVLLMFELAVKDPDVKIYSLIK 119 Query: 121 LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWET---NPESTRYLTFLKGRVGRK 177 ++ N+ + D I T + + G Sbjct: 120 YDYKLALEQNDGAPGKKLRRIVNALVDEKRAIQKTALVRVVGGVADQNISATDRTKQGVD 179 Query: 178 VADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAE--AQLDKAERQNVRQQVYSYCNEQLQ 235 + D+F DFL S ++ + + + A L + ++ + + + Sbjct: 180 LTDYFADFLAVSRAVSDTELSEITRKVLKAALQSCIAHLPGQDVAKALKKAQANLGTRRR 239 Query: 236 AGEEIELKSLSKELAGVSEVSFTEFAAEK------GYELEE-SFPADRSTLRQ-LTKFAG 287 EE ++++ + + +L E SF DR LRQ + Sbjct: 240 IDEEAIVEAVMLAAGHPEDEKVANRLERETRSRVRKSKLHELSFKPDRRILRQPYMRKIV 299 Query: 288 SGGGLTINFDAMLLGERI 305 + G+TI F + Sbjct: 300 TTEGVTILFPDRAENPNV 317 >UniRef50_A8TFP7 Putative uncharacterized protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFP7_METVO Length = 396 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 115/390 (29%), Gaps = 81/390 (20%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETV-----VEMVAELHRVYSAKNKAYGL 56 ++ I+++ H++ + E +L + + + ++ L++ + Sbjct: 7 NIRIDKVIAHKIPGKHEDEDSCILNSKFEDMDDAIKSHLQERLITVLNKKSKRMDLKIKD 66 Query: 57 FSEESELAQ--TLRLQRQGE-----------EDFLAFSRAATGRLRDELAKYPFADGGFV 103 ++S + L + +++ ++ L + K GG V Sbjct: 67 TGKDSIFQKMSYLATYVHNKPREGINDPNFWINYIETTQNIAKTL-HNIQKNSNTPGGIV 125 Query: 104 LFCHYRYL---AVEYLLVAVLSNLSSMRVNENLDINPTHYL------------------D 142 + R ++ + N+N + N + Sbjct: 126 IIISGRTGLGVKYDFSAIIKAELDDGFEYNDNANANANANDNANDNANDNDNDNDNDNDE 185 Query: 143 INHADIVARIDLTEWETN------------------PESTRYLTFL------KGRVGRKV 178 N V I LT+ + ++ F+ K Sbjct: 186 SNKLKYVTNILLTKSQKLYKVGMFIDKNSENRGEPIRNEEDFIAFVFDDTIRKSSDNNGA 245 Query: 179 ADFFMD-FLGASEGLNAKAQNRGLLQAVDDFTAEAQLDK------AERQNVRQQVYSYCN 231 A +F D FLG S + + L+ + + + + +E ++ +Y + Sbjct: 246 AKYFYDSFLGCS-LEDPAQYTKKFLKEIPEIINNLKDNDGKTISTSEIITLKNSARAYLS 304 Query: 232 EQLQAGEEIELKSLSKELAGVS-EVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGS-- 288 EI + E + F + GY L S P D + + QLT + Sbjct: 305 ---SNTSEIHIPDFVNEYIPNKYKADFMIGINDIGYPLN-SIPKDTAPI-QLTLSTTTLE 359 Query: 289 -GGGLTINFDAMLLGERIFWDPATDTLTIK 317 G+ I + + + + + TIK Sbjct: 360 FSSGIKIKYPTEKSTDIEIIESSEEYTTIK 389 >UniRef50_C0B175 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B175_9ENTR Length = 51 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 38/50 (76%), Positives = 42/50 (84%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAK 50 MSLDI+Q+ LHQLIKRDEQ LE+VLRDSLLE V EM+ ELHRVYSAK Sbjct: 1 MSLDISQLVLHQLIKRDEQTLEVVLRDSLLEIEPVVQEMIEELHRVYSAK 50 >UniRef50_Q8E2Y9 Putative uncharacterized protein gbs1974 n=1 Tax=Streptococcus agalactiae serogroup III RepID=Q8E2Y9_STRA3 Length = 363 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 98/361 (27%), Gaps = 57/361 (15%) Query: 5 INQIALHQLIK----------RDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAY 54 I + L+ K L ++ + + + + +K Sbjct: 2 IKNLILYHFTKDNIGENDSLVEKGSVYSGSLSNAPTQNFNEIELFFYSHAKSIISDSKVK 61 Query: 55 GLFSEESELAQTLRLQ--RQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLA 112 + + L + E F S+ +L+ + +++ L Sbjct: 62 NFRFKNPRVQIALNAVGVFENSEAFEEQSQEIADKLKSSIMGRFKNP-FYLVVFTANILQ 120 Query: 113 VEYLLVAVLSNLSSMRVNENLDINPTHYL---DINHADIVARIDLTEWET--------NP 161 + L + + +RV + + + A I + P Sbjct: 121 EDCLCILKMEANIGVRVTNEVTLETLQNILPTGKARLQKAAIIFKEKTAAFIENRENGEP 180 Query: 162 ESTRYLTFLKGRVGRKVADFFMDFLG-----ASEGLNAKAQNRGLLQAVDDFTAEAQLDK 216 ++ + + FF FL A NA+ L+ + + E K Sbjct: 181 KTNIHSKVIDKLESNIAGYFFETFLDSQKVFADPNTNAQIAIDALVISSSPYIKEGYTTK 240 Query: 217 AERQNVRQQV-------YSYCNEQLQA-------GEEIELKSLSKELAGVSEVSFTEFAA 262 + +R ++ + Y L+ E+++ +L + +F Sbjct: 241 DIVEVLRNELSVEKHTSFDYLAHTLEDYLDFSRSNNEVDIDNLGEF-------AFNVAYQ 293 Query: 263 EKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML-------LGERIFWDPATDTLT 315 + ++E R + + + I++ L GE D T+ Sbjct: 294 KNNTVVKEFLAKYRRPPKVIITSKDKTDKVKISYYKALEDNQTVQRGESTEVDGEYITIK 353 Query: 316 I 316 I Sbjct: 354 I 354 >UniRef50_Q5P8H5 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8H5_AZOSE Length = 347 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 93/322 (28%), Gaps = 33/322 (10%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEES 61 SL I + LH + + + + + F E S Sbjct: 11 SLHITSMILHVVGDGAFSPQPARAVEHE-------EFFIDRIRDTDVSP---VYSFKETS 60 Query: 62 ELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLL-VAV 120 + L G F ++A + L DG +F + V + Sbjct: 61 NTKGQIELIATGAVSFEEGAQALSREFSR-LHVGSSRDGALFIFELSTHDPVTKIYSFVK 119 Query: 121 LSNLSSM---RVNENLDINPT---HYLDINHADIVARIDLTEWETN-PESTRYLTFLKGR 173 ++ V+E + D + + P S R + + Sbjct: 120 YDYREAIEQAAVDEGGLLRRIVTAFIADKKAIQKSTIVRVVGGVAELPISARD----RMK 175 Query: 174 VGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDD--FTAEAQLDKAERQNVRQQVYSYCN 231 ++ D+F FL S L+ + N+ ++ + + L + + + ++ Sbjct: 176 SSPEIGDYFATFLDVSRTLSDEDLNKKTIEVLRTTLTACKELLPEQDVPSAFRRAQGILR 235 Query: 232 EQLQAGEEIELKS-LSKELAGVSEVSFTEFAAEKGYELEE------SFPADRSTLRQL-T 283 ++ + E + L+ E + + + F DR LR+ Sbjct: 236 DRQEINEAAITDAVLAAAGNPEDEEVRSTIQSTTRRRIRVAKLEGLEFRPDRQVLRRAPL 295 Query: 284 KFAGSGGGLTINFDAMLLGERI 305 + + G+T+ + G + Sbjct: 296 RKVRTTEGVTLTYPDDAEGITV 317 >UniRef50_UPI000196CFA5 hypothetical protein CATMIT_02249 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CFA5 Length = 329 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 36/332 (10%), Positives = 104/332 (31%), Gaps = 25/332 (7%) Query: 2 SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETV-VEMVAELHRVYSAKNKAYGLFSEE 60 ++ IN+I +H L + + L + E +T ++ + + + Sbjct: 3 TIIINKIMMHMLDFEHRK---IYLSEDFCELNDTTQEYYHKKVEKALYSPAIKELVVPSL 59 Query: 61 SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV 120 EL + +E+F ++ + + + +L+ V + Sbjct: 60 HELLLRADKMLEDDEEFKKQAKEISEKFFALGSVIEEMPNSNILYVDCYRDGVHIIAALK 119 Query: 121 LSNL-SSMRVNENLDINPTHYLDI----NHADIVARIDLTEWETNPESTRYLTFLKGRVG 175 L+ +S+ + E ++ T + D ID + + +YL + G++ Sbjct: 120 LNYKYNSVSLVEEENVRITRRQVLPQIGTAVDEAIIIDTDHKKLSLIEKKYL--IDGKMD 177 Query: 176 RKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQ 235 + ++ E L + + + + V+ ++ E + V E+ Q Sbjct: 178 TYLN---SQWIKGEEKLTDRQKISTMKKVVNKIDDIYHVNDKEALPL---VKQEILERTQ 231 Query: 236 AGEEIELKSLSKELAGVSEVSFTE---FAAEKGYELEESFPADRSTLRQLTKFAGSGGGL 292 GE ++ + +++ + E + G +++ + + Sbjct: 232 MGELVKPIEVVRKVMERDYQAQEESETMMKDLGIGEDDTISLNALGRSVEVVKITLDENI 291 Query: 293 TINFDAMLLGERIFWDPATD-----TLTIKGT 319 I ++ + ++ + Sbjct: 292 QITMPVDEYVNGSTFEKKENPDGTVSIVLNNI 323 >UniRef50_Q5LAA0 Putative uncharacterized protein n=1 Tax=Bacteroides fragilis NCTC 9343 RepID=Q5LAA0_BACFN Length = 343 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 35/341 (10%), Positives = 96/341 (28%), Gaps = 50/341 (14%) Query: 1 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE 60 M ++I + LH + + + L + + V ++ E+ +S KNK L + Sbjct: 1 MLMNIRKAFLHHIEQSLNTIDAVDLTEHYSDIEPIVQSILNEI---FSGKNKRACLIPPD 57 Query: 61 SELAQTLRLQRQGEEDFLAFS------------RAATGRLRDELAKYPFADGGFVLFCHY 108 + L + + + + S L + + G + Sbjct: 58 NRLLSAIVEGIENDIVEIQNSSVTISAERLLRKEKDAQELYGSITQ---IPKGSLFHLLV 114 Query: 109 RYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYL- 167 Y ++ + + ++ + +N + + + Sbjct: 115 EDDGKTYFIITKTDHDK---FLDERELLTRRGIPLNKKTY------KSFFCEIVDNQLIN 165 Query: 168 TFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQA-VDDFTAEAQL-DKAERQNVRQQ 225 F+ GR ++ +L + +L +D ++ + + +R Sbjct: 166 AFIYDPSGRSARYWWEGYLDVQLCNSDAKNTEKVLTHLIDKIIFSVKVKSPDDYRVLRDN 225 Query: 226 VYSYCNEQLQAGEEIELKSLSKELAGVSE--------VSFTEFAAE--KGYELEESFPAD 275 Y EE L + + + + + + SF Sbjct: 226 TIYYFRSH----EEFNLSEYLQHVWEHYTPILEGLSLDRCKDKVNKMSENKNFDTSFSII 281 Query: 276 RSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTI 316 +++ + K + ++ L + + + +L I Sbjct: 282 PASINRRVKR-----NIPLSPKLKLQIDDMSFQEEK-SLII 316 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.140 0.332 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,577,951,427 Number of Sequences: 3077464 Number of extensions: 53038872 Number of successful extensions: 190019 Number of sequences better than 1.0e-01: 134 Number of HSP's better than 0.1 without gapping: 160 Number of HSP's successfully gapped in prelim test: 116 Number of HSP's that attempted gapping in prelim test: 189358 Number of HSP's gapped (non-prelim): 283 length of query: 335 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 206 effective length of database: 643,403,500 effective search space: 132541121000 effective search space used: 132541121000 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.4 bits)