64 c3tmiA_ Probab=98.46   E-value=5.9e-06  Score=53.86  Aligned_columns=120  Identities=14%

Q ss_pred             CCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-CCEEEEEECCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             3689989999999984198599981898755789999999999960468-967999801527999999999986400121
Q batch____       147 VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGE-RCRIRLAAPTGKAAARLTESLGKALRQLPL  225 (608)
Q Consensus       147 ~~~l~~~Q~~Av~~~~~~~~~iI~G~pGTGKTt~i~~~i~~L~~~~~~~-~~~Ill~ApT~kAa~~L~~~l~~~~~~~~~  225 (608)
                      ...+-+.|.+++..++.+.=++|..|.|+|||.+....+..+....... +.++++++||..-+....+.+.........
T Consensus         1 ~~~pr~yQ~e~~~~~l~g~n~ii~~~TGsGKT~~a~~~i~~~l~~~~~~~~~k~Lii~Pt~~L~~Q~~~~~~~~~~~~~~   80 (670)
T c3tmiA_           1 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGY   80 (670)
T ss_dssp             CCCCCHHHHHTTHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHTSCTTCCCCEEEECSSHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCE
T ss_conf             97889799999999974998999908998658999999999997242357976999828999999999999984476876


Q ss_pred             CC-----------------HHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCC
Q ss_conf             10-----------------02332013689999871026653022232123347988999482229
Q batch____       226 TD-----------------EQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI  274 (608)
Q Consensus       226 ~~-----------------~~~~~~~~~a~ti~~~l~~~~~~~~~~~~~~~~l~~d~iivDEasmv  274 (608)
                      ..                 ...........++...+        ..........++++|+|||-.+
T Consensus        81 ~v~~~~g~~~~~~~~~~~~~~~~iii~T~~~l~~~l--------~~~~~~~~~~~~~iIiDEaH~~  138 (670)
T c3tmiA_          81 RVTGISGATAENVPVEQIVENNDIIILTPQILVNNL--------KKGTIPSLSIFTLMIFDECHNT  138 (670)
T ss_dssp             CEEEECTTTCSSSCHHHHHHTCSEEEECHHHHHHHH--------HTTSSCCGGGCSEEEEETGGGS
T ss_pred             EEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHH--------HCCCCCCCCCCCEEEEECCHHC
T ss_conf             999986797667888874138989999878998887--------5275457011778885030220