60 c3tbkA_ Probab=98.52   E-value=2.2e-06  Score=56.50  Aligned_columns=129  Identities=12%

Q ss_pred             CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-CCEEEEEECCCHHHHHHHHHHHHHHHCCC
Q ss_conf             13689989999999984198599981898755789999999999960468-96799980152799999999998640012
Q batch____       146 PVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGE-RCRIRLAAPTGKAAARLTESLGKALRQLP  224 (608)
Q Consensus       146 ~~~~l~~~Q~~Av~~~~~~~~~iI~G~pGTGKTt~i~~~i~~L~~~~~~~-~~~Ill~ApT~kAa~~L~~~l~~~~~~~~  224 (608)
                      +..++-+.|++|+..++.++-++|..+.|+|||.+....+..+....... +.++++++||..-+....+.+........
T Consensus         1 ~~~~lr~yQ~~~i~~~l~~~~~ii~~~TGsGKT~~a~~~i~~~l~~~~~~~~~~~Lii~P~~~L~~Q~~~~~~~~~~~~~   80 (524)
T c3tbkA_           1 SPLKPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKKFPCGQKGKVVFFANQIPVYEQQATVFSRYFERLG   80 (524)
T ss_dssp             CCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHTCCSSCCCCEEEECSSHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf             95787779999999997299889991899866899999999999835545797699982899999999999998405268


Q ss_pred             CCCHHHHHCCHHHHHHHHHHCCCC---------CCCHHHHHHCCCCCCCEEEEECCCCC
Q ss_conf             110023320136899998710266---------53022232123347988999482229
Q batch____       225 LTDEQKKRIPEDASTLHRLLGAQP---------GSQRLRHHAGNPLHLDVLVVDEASMI  274 (608)
Q Consensus       225 ~~~~~~~~~~~~a~ti~~~l~~~~---------~~~~~~~~~~~~l~~d~iivDEasmv  274 (608)
                      ........................         ...............+++++||+.++
T Consensus        81 ~~v~~~~g~~~~~~~~~~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~~~~~de~~~~  139 (524)
T c3tbkA_          81 YNIASISGATSDSVSVQHIIEDNDIIILTPQILVNNLNNGAIPSLSVFTLXIFDECHNT  139 (524)
T ss_dssp             CCEEEECTTTGGGSCHHHHHHHCSEEEECHHHHHHHHHTSSSCCGGGCSEEEETTGGGC
T ss_pred             CEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC
T ss_conf             26999988899689989863489899982689977754145565432222444420101