42 c3llmB_ Probab=98.66   E-value=1e-07  Score=64.56  Aligned_columns=144  Identities=17%

Q ss_pred             HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH-HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             89999999984198599981898755789999999-99996046896799980152799999999998640012110023
Q batch____       152 NWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLA-ALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQK  230 (608)
Q Consensus       152 ~~Q~~Av~~~~~~~~~iI~G~pGTGKTt~i~~~i~-~L~~~~~~~~~~Ill~ApT~kAa~~L~~~l~~~~~~~~~~~~~~  230 (608)
                      ..|.+++..+..++..+|+|+.|||||+.+...+. .+.......+.+|+++.|+.-++..+.+++..............
T Consensus        64 ~~q~~~l~~i~~~~~vii~a~TGSGKT~~~~~~il~~~~~~~~~~~~~i~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~  143 (235)
T c3llmB_          64 KFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGY  143 (235)
T ss_dssp             GGHHHHHHHHHHCSEEEEECCTTSSHHHHHHHHHHHHHHHTTCGGGCEEEEEESSHHHHHHHHHHHHHTTTCCTTSSEEE
T ss_pred             HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             99999999998589599987998835789999999999852677686699970828999999999866407754113457


Q ss_pred             HHCCHHHHH-HHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCC--CCCHHHHHHHHHHHHC---CCEEEEE
Q ss_conf             320136899-998710266530222321233479889994822--2999999999998633---9879993
Q batch____       231 KRIPEDAST-LHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEAS--MIDLPMMSRLIDALPD---HARVIFL  295 (608)
Q Consensus       231 ~~~~~~a~t-i~~~l~~~~~~~~~~~~~~~~l~~d~iivDEas--mv~~~~~~~ll~~l~~---~~rlilv  295 (608)
                      ......... -...+-......-..........++++|+||+-  |.+...+..+++.+..   ..|+|++
T Consensus       144 ~~~~~~~~~~~~~~i~~~T~~~l~~~l~~~L~~i~~iViDE~H~r~~~~~~ll~~lk~~~~~~~~~riil~  214 (235)
T c3llmB_         144 SVRFESILPRPHASIXFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLX  214 (235)
T ss_dssp             EETTEEECCCSSSEEEEEEHHHHHHHHHHCCTTCCEEEECCTTSCCHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             EECCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCEEEEECHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             55251123576774775228999987523843162899876777143243899999999604988569998