BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (385 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammapro... 783 0.0 UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gamm... 380 e-104 UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=S... 343 6e-93 UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera ... 341 2e-92 UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=... 328 1e-88 UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax... 318 2e-85 UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconac... 313 5e-84 UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gamm... 300 5e-80 UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiel... 265 2e-69 UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobact... 261 3e-68 UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobac... 251 3e-65 UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholder... 251 3e-65 UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator ... 232 1e-59 UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteure... 232 2e-59 UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=... 211 4e-53 UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Ta... 199 1e-49 UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulat... 198 3e-49 UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudom... 191 4e-47 UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 T... 190 9e-47 UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinob... 189 1e-46 UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacil... 188 3e-46 UniRef50_A7JU45 Sugar diacid utilization transcriptional regulat... 188 3e-46 UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobac... 184 7e-45 UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=... 179 1e-43 UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=... 179 2e-43 UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 168 3e-40 UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 ... 157 5e-37 UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=... 152 2e-35 UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=M... 150 8e-35 UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus ... 148 4e-34 UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacil... 146 1e-33 UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobac... 143 9e-33 UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brach... 141 5e-32 UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staph... 141 5e-32 UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clos... 140 9e-32 UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 137 4e-31 UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=L... 136 1e-30 UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Ta... 135 2e-30 UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacteriu... 134 4e-30 UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia... 132 2e-29 UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 ... 131 4e-29 UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus su... 131 5e-29 UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus c... 131 5e-29 UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoan... 130 1e-28 UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillu... 130 1e-28 UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacil... 129 2e-28 UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 128 3e-28 UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicut... 126 1e-27 UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 126 1e-27 UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicut... 123 1e-26 UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobac... 122 2e-26 UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional reg... 122 2e-26 UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactoba... 117 6e-25 UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteri... 117 9e-25 UniRef50_C1B522 Putative CdaR family transcriptional regulator n... 117 1e-24 UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacil... 115 2e-24 UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax... 115 4e-24 UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotro... 114 4e-24 UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 113 2e-23 UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiob... 112 3e-23 UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacil... 112 3e-23 UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 ... 111 4e-23 UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacilla... 110 6e-23 UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobac... 108 3e-22 UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=... 108 3e-22 UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=C... 108 4e-22 UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquet... 107 7e-22 UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 106 1e-21 UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermoba... 106 1e-21 UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Ente... 106 2e-21 UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacteriu... 106 2e-21 UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax... 105 2e-21 UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethi... 103 1e-20 UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillu... 103 1e-20 UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales ... 102 2e-20 UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttle... 101 6e-20 UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethi... 99 3e-19 UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostri... 99 3e-19 UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepI... 94 8e-18 UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactoba... 94 9e-18 UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostri... 89 4e-16 UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=C... 87 1e-15 UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria... 87 2e-15 UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoan... 86 2e-15 UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=S... 86 3e-15 UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteri... 82 2e-14 UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Ente... 82 4e-14 UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=N... 81 6e-14 UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelot... 80 1e-13 UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sangu... 80 1e-13 UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaeros... 80 1e-13 UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliph... 80 1e-13 UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=C... 79 4e-13 UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=... 77 1e-12 UniRef50_Q48HC7 Sugar diacide regulator n=1 Tax=Pseudomonas syri... 76 2e-12 UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdol... 75 4e-12 UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostri... 74 9e-12 UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains ... 74 1e-11 UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=C... 74 1e-11 UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminoc... 74 1e-11 UniRef50_A8UB66 Putative uncharacterized protein (Fragment) n=1 ... 73 2e-11 UniRef50_A9KS82 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 72 3e-11 UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmic... 72 5e-11 UniRef50_C0D4S9 Putative uncharacterized protein (Fragment) n=1 ... 71 8e-11 UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 70 1e-10 UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5... 70 1e-10 UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 69 4e-10 UniRef50_Q896S3 Transcriptional regulatory protein n=1 Tax=Clost... 68 5e-10 UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coproco... 68 6e-10 UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicu... 67 1e-09 UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=M... 67 1e-09 UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobac... 67 1e-09 UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria ... 65 3e-09 UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Strepto... 65 3e-09 UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=M... 65 5e-09 UniRef50_B8FZU5 Putative transcriptional regulator, PucR family ... 65 6e-09 UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1... 64 7e-09 UniRef50_B8G0W7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 64 1e-08 UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliph... 64 1e-08 UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 64 1e-08 UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethioba... 63 2e-08 UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerob... 62 3e-08 UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodoco... 62 3e-08 UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 62 3e-08 UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n... 62 3e-08 UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 62 4e-08 UniRef50_Q897N0 Methyl-accepting chemotaxis-like protein n=1 Tax... 62 4e-08 UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 62 5e-08 UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=R... 62 5e-08 UniRef50_UPI0001B584FA putative transcription regulator n=1 Tax=... 60 1e-07 UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus Re... 60 1e-07 UniRef50_A8RJG3 Putative uncharacterized protein n=1 Tax=Clostri... 60 1e-07 UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-07 UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID... 60 2e-07 UniRef50_C8XKF3 Putative transcriptional regulator, PucR family ... 59 2e-07 UniRef50_A8VTS2 Putative transcriptional regulator, PucR family ... 59 3e-07 UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacter... 59 3e-07 UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostri... 59 3e-07 UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 59 3e-07 UniRef50_B1HSD1 Putative uncharacterized protein n=1 Tax=Lysinib... 59 4e-07 UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 ... 59 4e-07 UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=T... 58 5e-07 UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 58 5e-07 UniRef50_Q0RXQ9 Putative uncharacterized protein n=1 Tax=Rhodoco... 58 5e-07 UniRef50_B2V2N8 Putative uncharacterized protein n=3 Tax=Clostri... 58 6e-07 UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=C... 58 6e-07 UniRef50_C1I8N8 Putative uncharacterized protein n=1 Tax=Clostri... 57 8e-07 UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmat... 57 8e-07 UniRef50_A1SI66 Transcriptional regulator, CdaR family n=16 Tax=... 57 9e-07 UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoan... 57 9e-07 UniRef50_Q0SC55 Putative uncharacterized protein n=1 Tax=Rhodoco... 57 1e-06 UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 57 1e-06 UniRef50_B7GF27 Transcriptional regulator n=1 Tax=Anoxybacillus ... 57 1e-06 UniRef50_UPI0001C3115D transcriptional regulator, PucR family n=... 57 1e-06 UniRef50_C4GC67 Putative uncharacterized protein n=1 Tax=Shuttle... 57 1e-06 UniRef50_C0WRU8 Sugar diacid utilization regulator n=2 Tax=Lacto... 57 1e-06 UniRef50_D2SBY7 Putative transcriptional regulator, PucR family ... 57 1e-06 UniRef50_C9S1P6 Putative transcriptional regulator, PucR family ... 57 1e-06 UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus ... 57 1e-06 UniRef50_B5CNT1 Putative uncharacterized protein n=1 Tax=Ruminoc... 56 2e-06 UniRef50_O87552 Leucine-rich protein transcriptional regulator n... 56 2e-06 UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces R... 56 2e-06 UniRef50_B0A6R8 Putative uncharacterized protein n=1 Tax=Clostri... 56 2e-06 UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family ... 56 2e-06 UniRef50_UPI0001C3120E transcriptional regulator, CdaR n=1 Tax=C... 56 2e-06 UniRef50_B4V7K8 Putative uncharacterized protein n=1 Tax=Strepto... 56 2e-06 UniRef50_B8ETI6 Transcriptional regulator, CdaR n=1 Tax=Methyloc... 56 3e-06 UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=M... 56 3e-06 UniRef50_UPI0001788C88 putative transcriptional regulator, PucR ... 56 3e-06 UniRef50_Q0SG00 Putative uncharacterized protein n=2 Tax=Rhodoco... 55 3e-06 UniRef50_UPI000169310C YsfB n=1 Tax=Paenibacillus larvae subsp. ... 55 3e-06 UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 55 3e-06 UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n... 55 4e-06 UniRef50_Q8RAZ7 Regulator of polyketide synthase expression n=1 ... 55 4e-06 UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=B... 55 4e-06 UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clo... 55 4e-06 UniRef50_C2E9Z1 Putative uncharacterized protein n=1 Tax=Lactoba... 55 4e-06 UniRef50_C7TLV9 Sugar diacid utilization regulator n=2 Tax=Lacto... 55 6e-06 UniRef50_B3WA77 Sugar diacid utilization regulator n=1 Tax=Lacto... 55 6e-06 UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=M... 54 7e-06 UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=C... 54 8e-06 UniRef50_Q035M9 Sugar diacid utilization regulator n=1 Tax=Lacto... 54 8e-06 UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=C... 54 9e-06 UniRef50_UPI0001B55AAF regulatory protein n=1 Tax=Streptomyces s... 54 1e-05 UniRef50_C4L3L8 Putative transcriptional regulator, PucR family ... 54 1e-05 UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillacea... 54 1e-05 UniRef50_Q24Z82 Putative uncharacterized protein n=1 Tax=Desulfi... 54 1e-05 UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenuli... 54 1e-05 UniRef50_UPI0001B53A83 CdaR family transcriptional regulator n=1... 54 1e-05 UniRef50_Q2B9V6 Putative uncharacterized protein n=1 Tax=Bacillu... 54 1e-05 UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 54 1e-05 UniRef50_A4JMN4 Transcriptional regulator, CdaR family n=1 Tax=B... 54 1e-05 UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=D... 54 1e-05 UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevi... 53 1e-05 UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus... 53 1e-05 UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethi... 53 1e-05 UniRef50_C4IDD0 Transcriptional regulator, PucR family n=3 Tax=C... 53 2e-05 UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=P... 53 2e-05 UniRef50_D2QA67 Purine catabolism regulatory protein n=3 Tax=Bif... 53 2e-05 UniRef50_B6W8M0 Putative uncharacterized protein n=1 Tax=Anaeroc... 53 2e-05 UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostri... 53 2e-05 UniRef50_C6D0D7 Transcriptional regulator, PucR family n=1 Tax=P... 53 2e-05 UniRef50_D2B363 Putative transcriptional regulator, PucR family ... 53 2e-05 UniRef50_A0QZJ2 GAF domain protein n=1 Tax=Mycobacterium smegmat... 53 2e-05 UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kl... 53 2e-05 UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostri... 52 2e-05 UniRef50_UPI0001B54B4D hypothetical protein StAA4_23505 n=1 Tax=... 52 3e-05 UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=La... 52 3e-05 UniRef50_D2S8H6 Transcriptional regulator, CdaR n=1 Tax=Geoderma... 52 3e-05 UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID... 52 3e-05 UniRef50_B1YK79 Putative transcriptional regulator, PucR family ... 52 3e-05 UniRef50_D2AXV2 Putative transcriptional regulator, PucR family ... 52 3e-05 UniRef50_C4RL84 Transcriptional regulator n=1 Tax=Micromonospora... 52 3e-05 UniRef50_A6BK23 Putative uncharacterized protein n=3 Tax=Clostri... 52 3e-05 UniRef50_C6LBU3 Putative uncharacterized protein n=1 Tax=Bryante... 52 3e-05 UniRef50_Q5YWM3 Putative transcriptional regulator n=1 Tax=Nocar... 52 4e-05 UniRef50_Q8CUH2 Hypothetical conserved protein n=1 Tax=Oceanobac... 52 4e-05 UniRef50_A4F965 Regulatory protein n=1 Tax=Saccharopolyspora ery... 52 4e-05 UniRef50_UPI0001C3671A transcriptional regulator, CdaR n=1 Tax=C... 52 4e-05 UniRef50_A6TL32 Methyl-accepting chemotaxis sensory transducer n... 52 4e-05 UniRef50_B9DTC0 Leucine-rich protein n=1 Tax=Streptococcus uberi... 52 4e-05 UniRef50_C6J1N7 Transcriptional regulator n=1 Tax=Paenibacillus ... 52 4e-05 UniRef50_Q5WAP5 Transcriptional regulator n=1 Tax=Bacillus claus... 52 4e-05 UniRef50_C5RLK5 Putative transcriptional regulator, PucR family ... 52 5e-05 UniRef50_C9AUB5 Transcriptional regulator n=3 Tax=Enterococcus c... 52 5e-05 UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminoc... 52 5e-05 UniRef50_B5GDD1 Regulatory protein n=2 Tax=Streptomyces RepID=B5... 51 6e-05 UniRef50_C0LTN8 SibX n=1 Tax=Streptosporangium sibiricum RepID=C... 51 6e-05 UniRef50_B5H0P7 Transcriptional regulator n=5 Tax=Streptomyces R... 51 6e-05 UniRef50_Q9LBV9 Orf6 n=10 Tax=Clostridium perfringens RepID=Q9LB... 51 6e-05 UniRef50_C3K679 Putative uncharacterized protein n=1 Tax=Pseudom... 51 7e-05 UniRef50_Q0SG89 Possible transcriptional regulator n=2 Tax=Rhodo... 51 7e-05 UniRef50_B8FRW9 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 51 7e-05 UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces s... 51 7e-05 UniRef50_A4IKS2 Leucine-rich protein transcriptional regulator n... 51 7e-05 UniRef50_Q182E5 Putative uncharacterized protein n=10 Tax=Clostr... 51 8e-05 UniRef50_UPI0001B55647 hypothetical protein StAA4_29765 n=1 Tax=... 51 8e-05 UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostri... 51 8e-05 UniRef50_C9YU01 Putative uncharacterized protein n=3 Tax=Strepto... 51 9e-05 UniRef50_D2PWG9 Putative transcriptional regulator, PucR family ... 51 9e-05 UniRef50_Q396V3 Transcriptional regulator, CdaR family n=1 Tax=B... 50 1e-04 UniRef50_C1B3H1 Putative CdaR family transcriptional regulator n... 50 1e-04 UniRef50_C1XP63 Putative uncharacterized protein n=1 Tax=Meiothe... 50 1e-04 UniRef50_Q6WSB6 Putative uncharacterized protein n=1 Tax=Amycola... 50 1e-04 UniRef50_C3JQF0 Regulatory protein n=2 Tax=Rhodococcus erythropo... 50 1e-04 UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 50 1e-04 UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID... 50 1e-04 UniRef50_A6W7X2 Transcriptional regulator, PucR family n=1 Tax=K... 50 1e-04 UniRef50_Q9KDS0 BH1141 protein n=1 Tax=Bacillus halodurans RepID... 50 1e-04 UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=A... 50 1e-04 >UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammaproteobacteria RepID=CDAR_ECOLI Length = 385 Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV Sbjct: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR Sbjct: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS Sbjct: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE Sbjct: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG Sbjct: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE Sbjct: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 LTGLDLGNFDDRLLLYVALQLDEER Sbjct: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 >UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gammaproteobacteria RepID=Q3BM11_XANC5 Length = 396 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/376 (51%), Positives = 259/376 (68%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV R M IID N+NVMD G II SG+ RIG+LHEGALLVLS+ V+ID Sbjct: 4 LDRTLAQSIVDRAMTIIDGNVNVMDHSGVIIASGEPARIGQLHEGALLVLSRQGRVEIDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A+A+ L VR G+NLPL EG IVG +GLTG+P+ + + ELV M AE MLEQ+ L+ LL Sbjct: 64 ALAQQLDAVRPGVNLPLIAEGRIVGCVGLTGDPQRIGQQAELVRMAAEAMLEQAGLLRLL 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 A+D+RLREE+ + LI+ + TPAL WA+RLGI L+ PRV A++EV+S L +D+ + EL Sbjct: 124 ARDARLREEVTLGLIRPDGPTPALAGWAERLGIALDLPRVAAVIEVESDSLDLDAMLVEL 183 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 Q+L L+TPER NL+A +L E+VVLKPAL+ G WD + R+R L+ RM+ +LR Sbjct: 184 QRLHTLLSTPERGNLIAATALNELVVLKPALDRRGHWDVAEQRRRAHSLLERMRASSRLR 243 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 R++LG YF +A S++ A+TTM +GK R P + +FY D LPVL+D LR WQA Sbjct: 244 IRLALGQYFPQSNGLALSHQIARTTMRIGKARTPYADAFFYDDYRLPVLVDDLRQAWQAE 303 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL +PL L D L +TL+ WF ++ T+KAL IHRNTL+YR+ RI EL +D Sbjct: 304 ELRKPLQALLAQDRRSQLLKTLSVWFGAGMRMAPTAKALGIHRNTLDYRMQRIQELCAVD 363 Query: 366 LGNFDDRLLLYVALQL 381 LGN DD + LY+AL++ Sbjct: 364 LGNTDDCMRLYLALRM 379 >UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=Shewanella RepID=Q07ZT4_SHEFN Length = 413 Score = 343 bits (880), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 179/376 (47%), Positives = 248/376 (65%), Gaps = 1/376 (0%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + +DT +A IV RTM+II NINVM+A+ I+GSGD +RIG +HEGALL +SQ R V+I Sbjct: 30 FQIDTLIAAKIVDRTMKIIGHNINVMNAQAVILGSGDIDRIGTVHEGALLAISQNRNVEI 89 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 A+A +LHGV+ G+NLPL G++VGVIG+TGEP+ L YGEL+ MTAEM++EQ+ L Sbjct: 90 SQAIASNLHGVKPGLNLPLHYHGQVVGVIGITGEPDTLSHYGELLKMTAEMIVEQANLQE 149 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L +R EE + LI A E++ P+L +WA +LGIDL+ PRV AI+E+DS Sbjct: 150 QLQWQNRQTEEFISQLIHANEQDLPSLQQWALQLGIDLSVPRVAAIIELDSNNPLYQQDN 209 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 L+Q+ L P R+NL+A+ SLT++V+LKPA ++D E +R+ +L+ R+ Sbjct: 210 QALKQVLYLLQNPVRDNLIAMTSLTQLVILKPAFLDGKQFDPELENQRINKLLKRLPANM 269 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 QL +SLG+YF G I+ SYRTAK T+ +GK+ P Y YQD L VLL LR W Sbjct: 270 QLSLHISLGHYFGGELGISYSYRTAKETLDIGKKLHPTKTKYLYQDYSLQVLLSGLRHHW 329 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + N LA P +L +DNN L++TLAA+ H A + +LFIHRNTL YRL++I +T Sbjct: 330 RGNALAGPYLKLIEVDNNQQLQKTLAAYLDHMGDIQACANSLFIHRNTLRYRLDKIQTIT 389 Query: 363 GLDLGNFDDRLLLYVA 378 +DL +F+ L LY+ Sbjct: 390 NIDLRSFNGLLSLYLG 405 >UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera sp. MZ1T RepID=C4ZKY7_THASP Length = 384 Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 181/377 (48%), Positives = 246/377 (65%), Gaps = 5/377 (1%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV R M+I+ TN+NVMD RG II SGDR RIG HEGALLVL+QGR V++D Sbjct: 4 LDASLAQSIVDRAMQILRTNVNVMDERGLIIASGDRARIGSRHEGALLVLAQGRAVEVDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 AVA+ LH R GINLPLR EG +VGV+GL+GEP+ +R+ ELV + AE MLEQ++ M +L Sbjct: 64 AVAQRLHDTRPGINLPLRAEGRVVGVVGLSGEPDAVRQQAELVRLAAETMLEQAQWMQML 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 A+D RLREELV+ LI L +WA RLG+DL +P V ++E+ L D+ +A Sbjct: 124 ARDQRLREELVLQLIGVSPPGAGLDDWASRLGVDLARPCVALLIEIADASLAADAVLAAQ 183 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 Q+L+ L E A V+L E+ VL P + D R R++ L R+ G + Sbjct: 184 QRLRRLLAEQEPGLACAPVTLRELAVLMPLPAA-----ESDLRSRLQALHGRLGGEGSGQ 238 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 ++LG F G +ARS+++A+ T+ G++ P++ + Y +L LPVLL L W+A+ Sbjct: 239 PCLALGGRFGGDDGLARSWQSARATLQAGRRHRPQAAIHCYDELTLPVLLAGLGEGWRAD 298 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL RPL RL D +G LR TLAAWF H+++ ++ AL +HRNTLEYRL RI E+TGLD Sbjct: 299 ELRRPLRRLAQQDRDGQLRCTLAAWFAHDMKAAPSAGALHVHRNTLEYRLRRIGEITGLD 358 Query: 366 LGNFDDRLLLYVALQLD 382 L +D LLL++ L+LD Sbjct: 359 LARLNDCLLLFIGLELD 375 >UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=Gammaproteobacteria RepID=A4Y5G5_SHEPC Length = 413 Score = 328 bits (842), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 172/407 (42%), Positives = 252/407 (61%), Gaps = 27/407 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD+ +A+ IV+RTM+II NINVM+ +G I+GSGD +RIG +HEGALL ++Q R V+I Sbjct: 4 LDSAIAKQIVSRTMKIIGHNINVMNGQGMILGSGDPKRIGSIHEGALLAIAQNRNVEISQ 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 VA LHGV+ GINLPL +G+I+GV+G+TG+P L YGEL+ MTAEM++EQ+ L L Sbjct: 64 EVAASLHGVKPGINLPLHYQGQIIGVVGITGDPNELTHYGELLKMTAEMIVEQANLQDKL 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVD------------S 173 ++R REE ++ LI+AE + L WA++L ID++ PRV AI+E+ S Sbjct: 124 QWENRQREEFILQLIKAETDDRQLHRWAKQLDIDMSMPRVAAIIEISEKSTPIKIPKRPS 183 Query: 174 GQLGVDSAMA---------------ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 L +D A L+Q+ + L P+R NL+A+ S++++V+LKPA Sbjct: 184 DPLAIDLADTLQVNASDDRNHRVGETLKQVLHLLQYPDRGNLIAMTSMSQLVILKPAFLD 243 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 +WD E +R+++L+ R+ L F+++LG++F G IARSY+TA T+ +GKQ Sbjct: 244 GKQWDPELENQRIDRLLQRLPAQMNLNFKIALGHFFPENGGIARSYQTALETLALGKQLN 303 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPL 338 PE Y ++D L VLL L+ DW+ LA P +L D NG LR+TLAA+ H Sbjct: 304 PEGNKYLFEDYSLQVLLSGLKYDWRGQALAMPYQQLAKADKNGQLRKTLAAYITHFGDAQ 363 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 + LFIHRNTL YRL++I ++T D+ + L LY+ +D + Sbjct: 364 QCANTLFIHRNTLRYRLDKIQQITQADIQSLHGLLSLYLGQLIDSSK 410 >UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax=Vibrio RepID=A7JY33_VIBSE Length = 380 Score = 318 bits (815), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/378 (42%), Positives = 240/378 (63%), Gaps = 3/378 (0%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV RTM II N+NVM++ G IIGSGD +R+G++H+GA+L L+ G +++++ Sbjct: 4 LDHSLAQQIVDRTMSIIGHNVNVMNSAGIIIGSGDPKRVGQVHDGAVLALNHGDSLELNE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 L GV+ GIN+ L+L G++VG++G+TGEPE +R + +LV MTAE+ +EQ+ L+ Sbjct: 64 QQCLTLQGVKPGINMLLKLHGDVVGIVGVTGEPEKIRDFAKLVKMTAELTIEQAALVEKF 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 D R REE ++ I + L +WA RL ID+ QPRV ++EV + +M + Sbjct: 124 QWDRRHREEFILAWINGKLTDEELKDWAMRLSIDVTQPRVATVIEVSTP--SASKSMKSV 181 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + + L PERNNLVAIVS+ E+VVLKP +S +WD++ +R+++L++R+ ++ Sbjct: 182 RNIVELLEYPERNNLVAIVSVNEIVVLKPC-HSAKQWDSQIESERIDKLMSRLSDHDSHT 240 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 F ++LG F P +A SY++AK + +GKQ PE R Y + +L LPVLL L WQ Sbjct: 241 FHIALGQLFNEPKDVALSYQSAKQVLAIGKQFYPEKRKYLFDELRLPVLLAPLADIWQGE 300 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 ++ + RLK D +G L +TL A F N SK LFIHRNTL YRL +I+E+TGL Sbjct: 301 QIIDGVKRLKEKDKSGQLLKTLDALFECNGNVTECSKMLFIHRNTLRYRLEKITEITGLP 360 Query: 366 LGNFDDRLLLYVALQLDE 383 NF LY+A +L + Sbjct: 361 TTNFVGLAELYIATRLSK 378 >UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZI25_GLUDA Length = 400 Score = 313 bits (803), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 172/385 (44%), Positives = 239/385 (62%), Gaps = 2/385 (0%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M +D +AQ IV R+M +I NINVMD+ G II SGD R+G++H+GAL V+++ Sbjct: 1 MPSVAIDPALAQAIVDRSMTVIACNINVMDSHGVIIASGDPARLGQVHDGALRVMARQEA 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+I+ A R G+NLPLRL G +VG +GLTG P +R Y ELV M AE MLEQ++ Sbjct: 61 VEIEPRAAPPDGDARPGVNLPLRLGGAVVGCVGLTGVPGTIRPYAELVRMAAETMLEQAQ 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV-DSGQLGVD 179 L++++RLREELV++LI+ E PAL A RLGIDL RV AIVE+ Q G+ Sbjct: 121 QSRTLSRETRLREELVLSLIRDEAPIPALAASAARLGIDLRPARVAAIVEILPRTQDGI- 179 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + + ++ +L L P++ NLVA +SLTE+ VL PAL + G WD + R+R ++L+ R + Sbjct: 180 ALVGDMHRLGTLLGAPDQGNLVAPLSLTEIAVLTPALTARGTWDPDRLRERAQRLLARAQ 239 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 L R++LG GPG +ARSY+ A+ T+ G++ P R FY+D+ LPVLLD Sbjct: 240 TATGLDLRLALGRPVEGPGGMARSYQVARATLAAGRRLHPARRALFYEDMRLPVLLDDPL 299 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 DW+ EL PL L + L RTL W H +Q AT+ AL +HRN+L+YRL +I Sbjct: 300 RDWRTQELRAPLRPLTDAARHAPLLRTLRTWLDHGMQQRATAAALGLHRNSLDYRLRQIE 359 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEE 384 L G+DL D + LY+AL L + Sbjct: 360 RLCGVDLTRSADIVALYLALHLTPD 384 >UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gammaproteobacteria RepID=Q7MHW7_VIBVY Length = 422 Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 168/387 (43%), Positives = 251/387 (64%), Gaps = 11/387 (2%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 ++ L+ +A+ IV RTM+II ++NVMD +GRIIGSGD R+ + HEGA+L +++ RV Sbjct: 22 LSSMKLNETIARQIVERTMKIIPYSVNVMDDQGRIIGSGDPSRLQQKHEGAVLAITECRV 81 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+ID A A HL GV+ GINLP+ +++GVIG++G P+ ++ YGELV MTAE+++EQ+ Sbjct: 82 VEIDKATASHLKGVKPGINLPILFLEQVIGVIGVSGAPDEVKHYGELVKMTAELIVEQAA 141 Query: 121 LMHLLAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 LM + + R REELV+ LI A N L A+RLG++L++PR+ A+V+V + Sbjct: 142 LMSQVQWNKRHREELVLQLISGATLNDNQLNSIAERLGLNLSEPRIAAVVKVFPDK-QTS 200 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLT--EMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 ++ LQQ+ + L PER+NLV I+S++ E+VVLKP + W E KR+ QL+ R Sbjct: 201 LSLEHLQQIVHLLEYPERDNLVGILSVSNNEVVVLKPISLTDNGWSKEVETKRINQLLKR 260 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR--CYFYQDLMLPVLL 295 + + G +++LG+YF G +A+S+ TAK TM Q M E +FYQD LPVL+ Sbjct: 261 VSKEGNFSIKIALGDYFEGLAGLAQSFETAKLTM----QLMAEQSGTVFFYQDHKLPVLM 316 Query: 296 -DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 D L W+A +L PL +L+ D+ G+L +TL A+F N T +AL IHRNTL YR Sbjct: 317 SDLLSQPWKAEQLQAPLLKLQKKDSKGVLLKTLTAYFAQNCDACRTCQALHIHRNTLRYR 376 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQL 381 + +I ++T L+ N ++ LY+AL+L Sbjct: 377 IEKIEDITSLNFNNLNNTFQLYIALEL 403 >UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiella RepID=C5B989_EDWI9 Length = 373 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/381 (39%), Positives = 220/381 (57%), Gaps = 10/381 (2%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G L +A+ IV R M II ++NVMDARG II SGD R+ + HEGA+LVL++ R+ Sbjct: 1 MDGSDLSEAVARQIVHRAMEIIGHSVNVMDARGVIIASGDTARLHQRHEGAVLVLAENRL 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ++ID+A AR L GVR GINLP+ +VGV+G++G P +R YGELV M AE++LEQ+ Sbjct: 61 IEIDEAAARQLRGVRPGINLPITFHRRLVGVVGISGAPGEVRAYGELVRMAAELILEQAA 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L+ + R RE LV LI E + L A LG+D+ QPR+ + + D+ Sbjct: 121 LLEQSQWEKRYRETLVQQLIADERDEAQLAATAAYLGVDVAQPRIALLFTLQ------DA 174 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L+ L ALT R L+ + ++V+L P + G ++ R+ V QL + Sbjct: 175 HHETLRALLEALTALHREALIGVQGFAQLVMLLPCGD--GVMESPALRRTVRQLTRGIA- 231 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + +G F+G G++ RSYR+A+ + ++ +YQD +LP LL+ L G Sbjct: 232 -ARFALHIYVGGAFSGTGAVCRSYRSAQALQALARRHALSGTVIYYQDHVLPTLLEHLAG 290 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 WQA+EL + RL+ D+ G+L RTL +F N + TSK L IH NTL YRL RIS+ Sbjct: 291 SWQADELGQVWRRLQHQDSRGVLCRTLRTFFAQNCELSQTSKLLHIHVNTLRYRLQRISD 350 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 +T L++ + LY+ +QL Sbjct: 351 ITNLNINQLQSVIQLYLGMQL 371 >UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobacteriaceae RepID=B5R4K1_SALEP Length = 395 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/380 (38%), Positives = 206/380 (54%), Gaps = 8/380 (2%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L A+ IV R M+II ++NVMD G II SG+ R+ + HEGA+L L + R V+ID Sbjct: 8 YLKGYTARQIVQRAMKIIPYSVNVMDEHGVIIASGEPSRLRQRHEGAILALKENRFVEID 67 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A A L GVR GINLP+ +++GV+G+TGEPE +R Y ELV M AE+++E L+ Sbjct: 68 SATANQLKGVRSGINLPISFHEQLIGVVGITGEPEEVRAYAELVKMAAELVIEHMVLIEQ 127 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D R REEL+ LI E +T +L A LGIDL PRVV I+E+ Sbjct: 128 RQWDKRYREELINQLILRENSTESLRSMAAYLGIDLAVPRVVLIIELS------QPDREA 181 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+ + + RN+LV E++++KP G+W+ ++ + G Sbjct: 182 LRNVMDYFENHARNHLVTFTEFNELIIIKPITLKEGKWNTRQEMGELQIFKSWAASSG-- 239 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 R+ +G YF G + RS TA+ T + K++ S+ FY D LP LL L WQ Sbjct: 240 FSRILVGGYFAGETGLHRSLLTARATQAMAKRQKLRSQYIFYHDHALPALLSGLSESWQV 299 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 EL+R +L D G+L++TL WF HN T+KAL IH NTL YRL R ++T + Sbjct: 300 QELSRLWLQLAQHDAKGVLQQTLRTWFEHNCDLTQTAKALHIHVNTLRYRLQRCEDITHI 359 Query: 365 DLGNFDDRLLLYVALQLDEE 384 + L LY+ ++L E Sbjct: 360 KINELKSTLWLYIGMELQAE 379 >UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobacteria RepID=C4I5I6_BURPS Length = 487 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 152/378 (40%), Positives = 223/378 (58%), Gaps = 3/378 (0%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 +D ++A +IV RT+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+ID Sbjct: 85 IDARLATEIVVRTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVEIDA 144 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L L Sbjct: 145 AMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLTVEL 204 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +++R REE V+ L++ L WA RLGID+ + + ++ + ++ Sbjct: 205 RRNARHREEFVLQLLRRTAAAAELEAWADRLGIDMRLAHAAIVCRLSGVDTEPEAGVGQI 264 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD--AEDHRKRVEQLITRMKEYGQ 243 + +Q+ L L A S E+V+ GR A KR+ L +++ Sbjct: 265 EAMQSQLAQEWPQLLSAKTSYRELVMFDAVDARAGRDGVLATHAGKRLAALEGTLRKVAT 324 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L WQ Sbjct: 325 QPFSLALGIALDGIDGFERSYQCALATLRVGAARTPQRAAYSYYDFVLPVLLSALSQGWQ 384 Query: 304 ANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 A +L PL RL + +G L TL AW+ H+ P AT++AL IHRNTL+YRL +I + T Sbjct: 385 ARQLRLPLTRLLARERRSGALLDTLKAWYAHDGHPSATAQALGIHRNTLDYRLQQIRDAT 444 Query: 363 GLDLGNFDDRLLLYVALQ 380 GLDLG DDRL LY+ALQ Sbjct: 445 GLDLGAIDDRLWLYIALQ 462 >UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholderia thailandensis RepID=Q2T8U4_BURTA Length = 402 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 153/379 (40%), Positives = 229/379 (60%), Gaps = 5/379 (1%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 +D ++A +IVART+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+IDD Sbjct: 2 IDARLATEIVARTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVEIDD 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L L Sbjct: 62 AMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLTVEL 121 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +++R REE V+ L++ L WA RLGID+ + + ++ + ++ Sbjct: 122 RRNARHREEFVLQLLRRTAAAAELEAWAGRLGIDVRLAHAAIVCRLSGVDADPEAGVGQI 181 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD---AEDHRKRVEQLITRMKEYG 242 + +Q+ L L A S E+V+ + A+++ D A KR+ L +++ Sbjct: 182 EAMQSQLANEWPQLLSAKTSYRELVMFE-AIDARAVRDGALATHAGKRLAALEGTLRKVA 240 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L W Sbjct: 241 TQPFALALGIALDGIDGFERSYQCALATLRVGAARTPQQATYSYYDFVLPVLLSALSQGW 300 Query: 303 QANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 QA +L PL RL + +G L TL AW+ ++ P AT++AL IHRNTL+YRL +I + Sbjct: 301 QARQLRLPLTRLLARERRSGALLDTLKAWYANDGHPGATAQALGIHRNTLDYRLQQIRDA 360 Query: 362 TGLDLGNFDDRLLLYVALQ 380 TGLDLG DDRL LY+ALQ Sbjct: 361 TGLDLGAIDDRLWLYIALQ 379 >UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3Q7_9BACI Length = 373 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 140/367 (38%), Positives = 201/367 (54%), Gaps = 12/367 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ+IV RTM+II NINVM+ +G IIGSGD RI +HEGA+ V+ GR +I + Sbjct: 4 LDGALAQEIVDRTMQIIGRNINVMNEKGVIIGSGDEARIQSVHEGAVQVIGAGRGFEITE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A A L+GV+ GINLP+ + I+GVIG+TGEPE +R YGELV M AEM+L+Q+ LM + Sbjct: 64 AEAGRLNGVKAGINLPITFQDHIIGVIGITGEPEEIRSYGELVRMAAEMILQQAVLMDEM 123 Query: 126 AQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D RL+EEL L+ EN P E RLGIDL+ PR ++ D Sbjct: 124 QWDERLKEELTSQLLSGSENLDPLYFERVNRLGIDLDIPRTAIVI-------AADEQTKS 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +++ L E+ +L +++ +++LK + WD ++ ++ + L Sbjct: 177 YKWIRDRL---EKEDLY-VMNPGYIILLKKVITKREGWDHGQTMNQLGDWLSALAGSQGL 232 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + ++G Y G ++RSYR A T+ G++ P+ YFY+D LPV + A Sbjct: 233 PCQAAIGQYHPGLEGLSRSYREAVHTLEAGRKLDPQQALYFYEDYKLPVFVARAAELGIA 292 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 A L D G L+ TL + N + + L+IHRNTL YRL RI ELTG Sbjct: 293 GAFQHHAANLNQHDKKGELQETLRIYIEENGDSSSAASRLYIHRNTLRYRLERIKELTGK 352 Query: 365 DLGNFDD 371 D + D Sbjct: 353 DPRSIKD 359 >UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteurellaceae RepID=Y093_HAEIN Length = 368 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/386 (35%), Positives = 217/386 (56%), Gaps = 28/386 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD A+ IV R M+II ++NVMD G II SG+ R+ + H GA+L L + RVV+ID Sbjct: 3 LDKYTAKKIVKRAMKIIHHSVNVMDHDGVIIASGNSTRLNQRHTGAVLALRENRVVEIDQ 62 Query: 66 AVARHLHGVRQ-GINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A+A+ + Q GINLP+ G+ +GV+G++GEP +++Y ELV MTAE+++EQ L+ Sbjct: 63 ALAQKWNFEAQPGINLPIHYLGKNIGVVGISGEPTQVKQYAELVKMTAELIVEQQALLEQ 122 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + R +EE ++ L+ N + + A+ DLN+ RVV ++++ ++ A+ Sbjct: 123 ESWHRRYKEEFILQLLHCNLNWKEMEQQAKFFSFDLNKSRVVVLIKL------LNPALDN 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK----- 239 LQ L N L E VAI+SL ++VVLK NS L +MK Sbjct: 177 LQNLINYLEQSEFAQDVAILSLDQVVVLKTWQNS-------------TVLSAQMKTLLPA 223 Query: 240 EYGQLRFRVSLGNYFTGP--GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 +Y + +++++G P + S+++A++T+ G + P Y + + LPVLL Sbjct: 224 DYSKQDYKIAVGACLNLPLFEQLPLSFQSAQSTLSYGLKHHPRKGIYVFDEHRLPVLLAG 283 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L WQ NEL +PL+ L + + N +L +TL +F N T++ LF+H NTL YRLN+ Sbjct: 284 LSHSWQGNELIKPLSPLFS-EENAILYKTLQQYFLSNCDLYLTAEKLFVHPNTLRYRLNK 342 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDE 383 I ++TGL DD+L LY+ L+ Sbjct: 343 IEQITGLFFNKIDDKLTLYLGTLLEH 368 >UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXK6_9VIBR Length = 367 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 128/376 (34%), Positives = 204/376 (54%), Gaps = 14/376 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD ++AQ IV RTM II NINVM+ G ++ SG+ RIG+ H+GALL LS+ V++ Sbjct: 2 LDAQLAQRIVDRTMPIIGYNINVMNNAGLVVASGESSRIGQTHDGALLALSRKTSVEVTS 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + L GV+ G+NL L+ + I+GV+G+TGEP +R ELV MTAE++++Q+ L+ + Sbjct: 62 EDCKLLSGVKPGVNLLLKHKNAILGVVGITGEPNEIRGVAELVAMTAELIIDQADLLEKV 121 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +D R R+E ++ + + + + A+++ ++ + + +VE+ + DS+ A L Sbjct: 122 QRDRRYRDEFILACLTGRLSPSEMRDGAEQISVNPSDSWELLLVEMPTQ----DSSTATL 177 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + L ++L A +S +V+ P + +EQ R Sbjct: 178 TE---RLYQKPGHHLCAHLSARHLVIFVPTEQPLSADSVNEWLHWLEQTPCR-------N 227 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 +VS G + +Y +A M +GK P++ Y D LPVLL L G WQ Sbjct: 228 LKVSTGKFAHRLEEWQTAYNSALQVMKIGKAARPKNTVYLLDDYQLPVLLAPLHGTWQGE 287 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 +L++ A L D +G L TL A+F N T+ LFIHRNTL+YRL++I+E+TG + Sbjct: 288 QLSQMTATLVEHDKSGQLIATLEAYFDANGSANETASKLFIHRNTLKYRLDKITEITGFE 347 Query: 366 LGNFDDRLLLYVALQL 381 +F LY+A+QL Sbjct: 348 TTDFSHMAQLYLAIQL 363 >UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65PK8_BACLD Length = 372 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 138/386 (35%), Positives = 196/386 (50%), Gaps = 35/386 (9%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L ++A++IV RTM II NIN+MD G II SGDR RIG+ H GA L+ +V+ I Sbjct: 3 YLSKELAEEIVERTMSIIRHNINMMDENGVIIASGDRSRIGDEHAGAKDALAAEKVISIT 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 L G + G+NLP+ EI+GVIG+TG P + +YGELV M AE+ +EQ+ L Sbjct: 63 PEECSALTGTKPGVNLPIVFHDEIIGVIGITGPPSEVSRYGELVKMAAELTVEQAFLTKQ 122 Query: 125 LAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L D RLREE V+ +IQ + + E A+RL I L+ R + E+ S D A Sbjct: 123 LTWDQRLREETVIQMIQGTDLASLDFFERAERLNIPLDGQRTCLVFELPSA----DMKPA 178 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVL------KPALNSFGRWDAEDHRKRVEQLITR 237 +++L+ LT +L A +SL E+ V+ K + F W+ +++ Sbjct: 179 FIKKLEKHLTA---KDLYANISLKEVAVILAGAPTKSRSDLFSAWNG---------WLSQ 226 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC--YFYQDLMLPVLL 295 K R +LG + SY++AK T+ ++ E+ C Y Y++ +PVLL Sbjct: 227 WK-----TVRGALGEQADQLQQLPFSYQSAKQTL-----KIAENNCSLYDYREFAIPVLL 276 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 + Q RL D G L TL + N + TS LFIHRNTL YRL Sbjct: 277 SKIEHPDQEIHFQNIWDRLSQADQKGELTHTLLCYIEENGEIGETSSRLFIHRNTLNYRL 336 Query: 356 NRISELTGLDLGNFDDRLLLYVALQL 381 +I TG + FDD LY A+ L Sbjct: 337 RKIELATGCNPKRFDDLFKLYTAITL 362 >UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulator n=2 Tax=Actinobacillus minor RepID=B9CXD4_9PAST Length = 369 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/375 (30%), Positives = 203/375 (54%), Gaps = 15/375 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV R M+II ++NVMD G II SGD R+G+ H GA+ VL + ++++ID+ Sbjct: 3 LDNILAQSIVKRAMQIIPYSVNVMDENGVIIASGDICRLGQRHLGAVQVLRKNQIIEIDE 62 Query: 66 AVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + H V+QGIN+P+ +GVIG++G+PE +R+Y +LV M AE+++EQ+ + Sbjct: 63 QLEKQWHFEVKQGINVPITYLNNNIGVIGISGKPELVREYAKLVKMAAELIVEQAAQLEK 122 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 SR +EE V+ + +A + + + G+ + P + ++++ V+S + Sbjct: 123 ERWQSRYKEEFVLGVAKATLTPEQIVQQSTFFGLRYDVPYIAVLIKL------VESTAEK 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK-EYGQ 243 LQ L L+ AIV L ++V+ +P D + K+ + + + E+ + Sbjct: 177 LQLLLTYLSHYHPKVATAIVDLQKIVIFQPL-------DQHEILKKTKFWKSYLPPEFAE 229 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ +GN + I SY+ A T++ ++ + F+++ +P LL WQ Sbjct: 230 ESCQIIVGNEVSSLIDIQYSYQNAWQTLLYAEKMHLRKQLLFFEEYRMPALLADFAQSWQ 289 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A L +P+ +L D +L ++L +F N +K LFIH NTL YRL RI+++T Sbjct: 290 AKILFKPIYQLIEQDKKWVLMKSLQQYFFSNCDLDHAAKKLFIHPNTLRYRLERITQITS 349 Query: 364 LDLGNFDDRLLLYVA 378 L +D+ +LY+A Sbjct: 350 LSFNKIEDKSILYLA 364 >UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudomonas RepID=A6V9E8_PSEA7 Length = 370 Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 137/378 (36%), Positives = 193/378 (51%), Gaps = 37/378 (9%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+ID+ Sbjct: 4 LDSALAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEIDE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A L GVR G+NLPL +VGV+G+TG PE +R Y ELV M AEM++EQ ++ Sbjct: 64 QAAACLRGVRPGVNLPLLHAERLVGVLGITGAPEVVRPYAELVRMAAEMLMEQRQMQDER 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + +E + L+ AL A+ LG+ L+ PR +E+ Sbjct: 124 HWQRQRQETWLRQLLDPAHGLGALAADAEHLGLALHWPRQAVFLELH------------- 170 Query: 186 QQLQNALTTPERNNLVAIV---------SLTEMVVL--KPALNSFGRWDAEDHRKRVEQL 234 ++A P + L+A + +L E +V +PA + DA +E Sbjct: 171 ---EHADPLPFQARLLAALGSRAEHWSAALGERLVFWCRPASQA----DA------LEHW 217 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 + R G R+ + ++ S R A+ + + R+P R L L Sbjct: 218 LERADARGWGVARLCCSDPVHSLEALRASARAARELLDYARSRLPGQRVVGLDGHRLASL 277 Query: 295 LDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 L S R +WQ +L PL R+ D GLL TLA W H+ P A ++AL IHRN+L YR Sbjct: 278 LFSQRDNWQVRQLLAPLQRVLDHDPQGLLAATLACWCAHDGHPQACAQALGIHRNSLRYR 337 Query: 355 LNRISELTGLDLGNFDDR 372 L RI+ ++GLDLG + R Sbjct: 338 LERIASISGLDLGRLEHR 355 >UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2C8_PSEAE Length = 361 Score = 190 bits (482), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 130/381 (34%), Positives = 204/381 (53%), Gaps = 25/381 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ+IV R M I+ N+NVMD++G IIG+G+ ER+ HEGA LVL+ R V+ID+ Sbjct: 4 LDHSLAQEIVDRAMAILPRNVNVMDSQGLIIGTGEAERLYTRHEGAQLVLANSRAVEIDN 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ-SRLMHL 124 A A L GV++G+N PL L+G+++GVIG++G P+ +R + E+V MTAEM++ Q + H Sbjct: 64 AAAGALRGVQEGVNFPLCLDGQVIGVIGVSGAPDEVRTFAEMVRMTAEMLVAQRNDQQHR 123 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + R+ + L L+ + A+ E AQRLG+ + R ++E+ + + +D A Sbjct: 124 IWLQKRIEDVLTAILLSGQSAQRAIVE-AQRLGLRPDLRRTAVLLEMATPE-DLDLAAEW 181 Query: 185 L-QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + Q +A P + +V P R D R+RV + G Sbjct: 182 IRHQAADAWCVP--------LHALGLVWCPP------RSAPPDFRERVAR-------AGI 220 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 RV++G T ++ M + +MP+++ +PV + R + Sbjct: 221 PFTRVAIGTPNTETKALHSEVEQLSDLMAYAQAKMPDAQWLDLAAHRIPVAVWRFRSENG 280 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +LA P L+ D+NG LRRTL WF H A ++AL IHRN+L YRL RI++++G Sbjct: 281 FLQLALPYVALQQEDSNGQLRRTLKCWFEHGSDGQACAEALNIHRNSLRYRLERIADISG 340 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 +DL + LY+A+ L E Sbjct: 341 VDLASPKGTTELYLAMILAAE 361 >UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFF9_9ALTE Length = 377 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 17/378 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD AQ IV R M++I ++NVM G II SGD R+GE+H+GA V +G + +D Sbjct: 4 LDQTTAQRIVDRAMQVIGHSVNVMTPDGVIIASGDPLRVGEIHQGARHVAVRGESLAVDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A GVR G+N+P+ + ++V V+G++GEP + + +LV +TAE+MLE + L+ L Sbjct: 64 HNAEQFPGVRHGVNVPITVGHQVVAVVGISGEPAKVLPFADLVKVTAELMLEHTALLELG 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 R E+ ++ LI P + W +R+G D QPR+ I+E D ++ + Sbjct: 124 QHRRRQIEDTLLALING-RTVPQV--WLERVGFDQAQPRLALIIEPAQLPGPDDFVISLM 180 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +QL+ + +++ L+A V+ ++VL P +HR EQ + R++ + Sbjct: 181 RQLEIS----DKSLLLAQVAPQRLLVLVPVKLP----GTPEHRSMTEQSLKRLQRHLPAA 232 Query: 246 FR----VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 +++G Y ++ Y +A TM G++ P + + Y D + +L +S Sbjct: 233 IYAPMVIAVGQYTE--SNLRGCYESALATMTYGRRESPHLKTHCYSDSPVAILWESFHPG 290 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 WQ +EL RPL L + L RTL A+F N + L +HRNT+ YRL I +L Sbjct: 291 WQQHELLRPLHALHAHPRHLLYARTLQAFFDANGDVQQCASTLHLHRNTIRYRLKSIEQL 350 Query: 362 TGLDLGNFDDRLLLYVAL 379 TGL + L LY+AL Sbjct: 351 TGLSPFKLPELLHLYLAL 368 >UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacillus pumilus RepID=A8FJ59_BACP2 Length = 370 Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 134/380 (35%), Positives = 205/380 (53%), Gaps = 27/380 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L T++AQ++V RTMRI+D NINVM+A G IIGSG+R RIG+ H+GA LVL+ G ++ID Sbjct: 4 LTTELAQEMVERTMRILDKNINVMNADGVIIGSGERNRIGQKHDGARLVLTSGNSMEIDY 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + L GVR GINLP+ ++VGVIG+TGEPEN+R + ELV M AE++LEQS L+ + Sbjct: 64 KASLQLEGVRPGINLPICFREQVVGVIGITGEPENIRHHAELVKMAAELVLEQSFLLERV 123 Query: 126 AQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQLGVDSAMA 183 R+ E+V LI ++ L A LG+DL++ R+ I + V S + V M Sbjct: 124 QWRQRIESEIVNQLISDSDVGDYQLKNRAAWLGMDLDKRRMAIIFQPVPSSEDAVHKMMH 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR--VEQLITRMKEY 241 +Q +NA ++L+ + E+V+L+ ++ DHR + V QL M+ Sbjct: 184 AIQYDKNA------DDLLGMTFRHELVLLREPIS--------DHRLKHVVVQLQRTMENA 229 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS---L 298 + V +G ++ S+ A+ ++ +GK PE YF++ L L + + Sbjct: 230 VGGQVLVGIGTVAADISRLSLSFEHARDSLRLGKALDPEESIYFFESYQLERLFITAGVV 289 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + + +PL + L TL+ + L+IHRNTL YRL++I Sbjct: 290 EENVSWTDFYKPLTQEVE------LAHTLSIYIEEGGDLQRIVDRLYIHRNTLRYRLDKI 343 Query: 359 SELTGLDLGNFDDRLLLYVA 378 LTG D + + LY+A Sbjct: 344 QALTGKDPRHVKQLMELYMA 363 >UniRef50_A7JU45 Sugar diacid utilization transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JU45_PASHA Length = 364 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/373 (30%), Positives = 191/373 (51%), Gaps = 17/373 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L+ +A IV RTM+II ++NVMD+ G II SGD RIG+ H GA++ L + V+ID+ Sbjct: 3 LNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQRHTGAVIALRNDQAVEIDE 62 Query: 66 AVARH-LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 +A+ V+ GINLPL G +GV+G++G+P+ +R+Y +LV M AE++++Q+ + Sbjct: 63 NLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQYAQLVKMAAELIMQQAFELEQ 122 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 R REE V L++ +T + + A G D +P V ++++ S + Sbjct: 123 ERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAKPLSVMVIKIHG------STAEK 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 LQ+L + + L A++ L ++ +L N + + + ++ + + Sbjct: 177 LQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNE---------KSLIRNALNKLND-PDI 226 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 F+ +G SY+TA T+ +Q + ++D LP LL S W+A Sbjct: 227 SFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPALLHSFSHSWEA 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L P L D +L ++L +F N +K LFIH NTL YRL +I ++TGL Sbjct: 287 KTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLRYRLEKIEQITGL 346 Query: 365 DLGNFDDRLLLYV 377 N + + +LY+ Sbjct: 347 SFNNIEQKFVLYL 359 >UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMQ7_OCEIH Length = 377 Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 18/378 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A IV RTM II NIN+MD G II SG+ RIG+LH+GA+ V+ + R ++ID Sbjct: 4 LTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEIDT 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + A H + GINLP+ + I+GVIG+TG P+ +R Y +L+ M AE+ LEQ+ L + + Sbjct: 64 SGATHWQSSQSGINLPITFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNEI 123 Query: 126 AQDSRLREELVMN-LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 Q+ ++R+ + N L+ E++ + E A +D+ V I+ +D E Sbjct: 124 QQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQTTYAVIIIFTPV----LDKKHTE 179 Query: 185 L--QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + +Q+ L + + + + + + ++LK + + H K + L+ + K Sbjct: 180 EVEKHIQSWLNHEDEH--IRLFT-NQHLILKKEIG----YSNPAHIKDI--LVEKHKNSS 230 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL-LDSLRGD 301 +++G+Y TG +SY+ A+ + V K P + Y+DL L +L D L+ Sbjct: 231 IPNMTIAVGSYLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNK 290 Query: 302 WQ-ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 Q A EL R+ T + L +TL + N + TS LFIHRNTL YRL++I + Sbjct: 291 PQSAKELTTTYQRILTESDGIQLHQTLQTYIEENGKVSITSDKLFIHRNTLTYRLDKIHQ 350 Query: 361 LTGLDLGNFDDRLLLYVA 378 +TG D N + L L +A Sbjct: 351 ITGKDPRNINHLLELKMA 368 >UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42195 Length = 368 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 128/382 (33%), Positives = 196/382 (51%), Gaps = 32/382 (8%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +AQ+IV RT+ II N+NVMD G IIGSGD+ R+ ELH GA+ ++Q V++ + Sbjct: 6 LAQEIVNRTIDIIGYNVNVMDKDGIIIGSGDQSRLFELHAGAVEAIAQEVEVEVGEEDLT 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 L G + GINLP+ EIVGVIG+TG + +R YG+LV M AE+ L Q+ L L D+ Sbjct: 66 RLKGTKTGINLPITFNEEIVGVIGITGPLDEIRGYGKLVKMAAELSLSQAFLTAELQWDT 125 Query: 130 RLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV-------DSA 181 R +EELV LI+AE E+ A LG+ ++ P ++ +D+ Q A Sbjct: 126 RHKEELVRQLIRAEIEDWNLFKTRADSLGLSISLP--CEVICIDTPQTATRYNEERQKYA 183 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + E + ++LT +++ V + + + L+ R+ Sbjct: 184 LEEHFKEYSSLTQIQKDRYVLFLPTKKAISKDKLLHIASRF------------------- 224 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + V G IA SY+ A ++ G+ + R ++Y++LML V L L Sbjct: 225 ---KLDVGYGTIAYTLDDIAPSYQKASYSINAGRFKKAGQRIHYYEELMLDVSLYKLSRS 281 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 EL L LK D L TL A+ HN + +KALF+HRNT++YRL +I+++ Sbjct: 282 TDMKELKGILMPLKPGDQANQLLDTLEAYIEHNGEVKQVAKALFVHRNTVQYRLQKIADI 341 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 T D + L LYV+L+L++ Sbjct: 342 TKKDPRVLEQLLELYVSLKLNQ 363 >UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=Pseudomonadaceae RepID=A4XS86_PSEMY Length = 371 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 137/369 (37%), Positives = 199/369 (53%), Gaps = 17/369 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+ID Sbjct: 4 LDSTLAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEIDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A L GV+ G+NLPL +++GV+G+TG+P+ +R Y ELV M AEM++E L Sbjct: 64 QAAACLRGVKPGVNLPLLHAEQLIGVLGITGDPDIVRPYAELVRMAAEMLVEHRVLQAER 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQLGVDSAMAE 184 +E + L+ ++ +L A+RLG+ L PR + ++ V+ G + Sbjct: 124 HWQRHQQEAWLRQLLDPQQRLSSLEVEAERLGLQLTWPRQICLLRLVEEG-----DPLPR 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +L AL + + +L+A + E++ +P S GR +DH + +E+G + Sbjct: 179 QARLLAALGS-KSEHLLAPLGRHELLWCRP--YSAGR---DDHAWLAQ---ADEREWG-I 228 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 R ++L + + ++ + G R PE R ++L LP LL + R W Sbjct: 229 R-SLALSDPLHDLAELRQASLVLRDLQAYGLARFPERRLLPLEELRLPTLLHAQRHSWLL 287 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 PL R+ D +G LR TL AW H+ Q ++AL IHRNTL YRL RI EL+GL Sbjct: 288 QGWLAPLRRVLAQDPHGTLRATLEAWCAHDGQVQLCAQALGIHRNTLRYRLERIGELSGL 347 Query: 365 DLGNFDDRL 373 DL D RL Sbjct: 348 DLDRLDQRL 356 >UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWQ0_9CLOT Length = 355 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 122/384 (31%), Positives = 192/384 (50%), Gaps = 49/384 (12%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV R M++I N+ + D G II SGD +RI + H GA L+ +V+ID Sbjct: 4 LSEELAQKIVDRMMKVIPYNVIITDENGIIIASGDVKRIHQFHSGAKQALNIKEIVEID- 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 H GVR G+N P+ +G ++GVIG+TG PE ++ + ELV +TAE+++ Q ++ Sbjct: 63 --CEHSQGVRPGVNSPIFFQGNLLGVIGITGVPEIVKPFSELVRVTAELLISQEYVLKNQ 120 Query: 126 AQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + +E+ + L E + E LGID+ P +AIV ++S Sbjct: 121 SIQEQEKEKFLYELAYLNEGYSQGFIERGLSLGIDVTVPD-IAIV--------INSEEES 171 Query: 185 LQQLQNALTTPERNN----------LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 L+ L+N L + +N +VA +SL KP LN RK +E+ Sbjct: 172 LKSLKNHLNSLLQNGEYCFMLNPNIIVAFISLK-----KPFLNIL--------RKSLEK- 217 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 K+YG ++ V L + I+ S A + +GK + Y Y+DL + Sbjct: 218 ----KQYGNIKVGVGLSEHI-----ISVSMNQAFKALHIGKHLQKDKSIYLYKDLCFISM 268 Query: 295 LDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 L +++ D+ E+ + LK N L TL A+ +N + T++AL +HRNTL YR Sbjct: 269 LANIKEDYNLKEVVKI---LKLEGNQADLLNTLIAYVYNNGEMQTTAQALHVHRNTLNYR 325 Query: 355 LNRISELTGLDLGNFDDRLLLYVA 378 L RI E++G D NF + L+ A Sbjct: 326 LERIKEVSGKDPRNFIELFELFTA 349 >UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 Tax=Enterobacteriaceae RepID=C4X8E2_KLEPN Length = 385 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 115/383 (30%), Positives = 193/383 (50%), Gaps = 25/383 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 + T +A +IVAR M II N+NV+D G+II SG+R RIGE HE A V+ G+ + I++ Sbjct: 3 ITTALANEIVARAMAIIHHNVNVIDHHGQIIASGERHRIGEQHEVAQEVIRTGKRICINN 62 Query: 66 AV-ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A A H V GIN P+ + +V V+G++G+P + +Y EL +TAE+++ Q+ M Sbjct: 63 AAEAARFHNVHPGINHPIIYDDRVVMVVGISGDPAAISRYAELAVLTAELLVRQAIEMRE 122 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRL---GIDLNQPRVVAIVEVDSGQLGVDSA 181 RLR+ L ++ + TPA E RL G D + PRV +V V Sbjct: 123 TNWRQRLRDTLFCQYLE-QGATPAGQEALHRLLELGFDFDTPRVPIVVTVQ--------- 172 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKP----ALNSFGRWDAEDHRKRVEQLITR 237 E QL + L+T R + ++++++L LN+ E + +E +++ Sbjct: 173 -VEQHQLSDILSTLLRE-FSQLSGVSDVILLGSHEILILNALSEAQ-ETLLRGIEFVLSN 229 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + + +G I + R A++ + VG + P+ + Y+++++ + L Sbjct: 230 QISH----YHIGIGVQADSAPDIREAIRFARSVIEVGSKVQPQRQIYYFREMAMLCLFRV 285 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L + N + +L D+ +L TL+++ +N +P TS L IHRNTL YRL + Sbjct: 286 LEDSYMVNFFINNVRQLLEHDSGEVLLDTLSSFIANNAEPGKTSLLLGIHRNTLTYRLQQ 345 Query: 358 ISELTGLDLGNFDDRLLLYVALQ 380 I + LD F D L V++ Sbjct: 346 IKKHIQLDPMVFTDLTQLAVSVH 368 >UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I4U8_VIBHO Length = 356 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 115/367 (31%), Positives = 187/367 (50%), Gaps = 43/367 (11%) Query: 29 MDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEI 88 MD +G II S D R+ + HEGA+L LS+ R ++I + + ++ GV+ G+NLP+ + + Sbjct: 1 MDEQGYIIASTDHSRLHQRHEGAILALSEKRTIEITEEMQHNMWGVKPGVNLPIFFKEQA 60 Query: 89 VGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA 148 +GV+G++G+ E +R+YGELV M AEM +E + + LL +EE V+ + E + Sbjct: 61 IGVVGISGKLEAVRQYGELVRMAAEMTVEHAHELDLLRWSETRKEEFVLQWLYHETHEDH 120 Query: 149 LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTE 208 L A +L ++L+ P VA+ + + VD + L LT + L A S Sbjct: 121 LRSLAGKLNVNLDTPYGVALCQ---HPIDVDQ-----RTLTTQLTPIHPHILKASCSGVI 172 Query: 209 MVVLKP-------ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGS-- 259 +VVL P LN + W+ K +++L+ ++ + R+ F+ P S Sbjct: 173 LVVLVPLQGKKPETLNQY--WE-----KNIQRLLKQLPVANRCRW------VFSDPVSDI 219 Query: 260 --IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW---QANELARPLARL 314 I ++ + + + + ++R D L LL+ + W Q N + RP+ Sbjct: 220 DEIRNTFFGLCSVLNGLQDNIHQARL---SDYPLAALLNPVSESWKLRQINNILRPIEG- 275 Query: 315 KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL 374 K+ D L TL AWF HN T+ +L++H NT+ YRL +I E TGL L NF + L Sbjct: 276 KSPD----LLTTLRAWFIHNSDIDKTASSLYVHPNTVRYRLKQIEECTGLSLTNFQQKGL 331 Query: 375 LYVALQL 381 LY AL + Sbjct: 332 LYAALTI 338 >UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RG03_MOOTA Length = 390 Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 109/387 (28%), Positives = 195/387 (50%), Gaps = 15/387 (3%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M+ L +AQ IV + M + NIN+MDA+GRII SG+ R+GE H A S+G Sbjct: 1 MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEP 60 Query: 61 VDIDDAVARHLHGVR-QGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 + + + ++ GV+ QG+N+P+R +G +VGVIG+TG P+ + Y ELV AEMM+E++ Sbjct: 61 IIVREN-DMNMFGVKYQGVNMPIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEA 119 Query: 120 RLMHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIV---EVDSG 174 L +++ E + L+ E + + + A+ GID + R V + ++ G Sbjct: 120 VLREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGIDYHISRSVCLFLTYPLNDG 179 Query: 175 QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 V+ + + A ++ + ++LK + + A+ + L Sbjct: 180 NNMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKKGVKDIPTFLAQ-----LNTL 234 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 ++ +L V +G++ + +SY A + +G+Q P+ + + Y DL + + Sbjct: 235 CDKLTIESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERV 294 Query: 295 LDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 + + + N + L L D ++ L T+ A+F++++ T+KAL +HRNT+ Sbjct: 295 IWEVPPAKRKNFIDEILGALIEEDTFHHRQLYSTMEAFFKNDLDIERTAKALHVHRNTII 354 Query: 353 YRLNRISELTGLDL-GNFDDRLLLYVA 378 YRL +I E TG D G+F + L L +A Sbjct: 355 YRLKKIKECTGYDPRGSFRELLHLGMA 381 >UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus RepID=Q81GB0_BACCR Length = 371 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 117/379 (30%), Positives = 187/379 (49%), Gaps = 32/379 (8%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A IV R+I NI +++ G II S D ERIG+ HEGAL Q + V I R Sbjct: 6 LANKIVREVRRLITENIIIINIEGVIIASTDTERIGQFHEGALRCAKQKKTVIITKEDER 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 L GV+ G+NLPL E++GVIG+TGEPEN+ +YGE++ E+++ ++ + L + Sbjct: 66 RLQGVKAGMNLPLLFHDEVIGVIGITGEPENISRYGEILRKMTELLIHENYFLEQLELEH 125 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE---LQ 186 R E V + +Q E +P+ + A+ LGIDL + + + + + G + M + Q Sbjct: 126 RSYEAFVFDWLQNTEWSPSFLDRAKTLGIDLYKKKQLILFSI-----GKNDTMLQRKIWQ 180 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 ++N LT E + ++ + F + A +++ Q + R+K+ + F Sbjct: 181 HIRNILT-------------KEHLFVRWGNDRFILFTAMSSKEQTYQFLKRLKQDCETLF 227 Query: 247 RVSL----GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + L G T P +++ Y A + V + + F +DL L + L + + Sbjct: 228 SIPLYIGIGQTVT-PNNMSICYEQALRALSVS---LETKKIVFNEDLRLEMCLQDISVET 283 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L R + L + L +TL + +N T+K L IH NTL YRL +I E T Sbjct: 284 REQFLERTIENLLSFPE---LMQTLRLFVDYNQSYKQTAKQLHIHINTLHYRLKKIEEHT 340 Query: 363 GLDLGNFDDRLLLYVALQL 381 GLD F D +LY AL L Sbjct: 341 GLDPKQFKDLNVLYFALLL 359 >UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacillaceae RepID=B7GLF5_ANOFW Length = 367 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 110/385 (28%), Positives = 190/385 (49%), Gaps = 29/385 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +A+ IV+ R+ID +I V+ G II S D RIG+ HEGA LV + + I Sbjct: 2 LSPHLAKKIVSDVRRLIDEDIIVVATNGIIIASTDTTRIGQFHEGAFLVCQEKKKRIITK 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 L GV+ GINLP+ G+++GVIG+TG+P+ + YGEL+ E++++++ + L Sbjct: 62 EDENVLRGVKAGINLPIFFHGDVIGVIGITGDPKKVSPYGELLKKMTELLIQENYYIEQL 121 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 ++R E V +QA E +P+ E AQ IDL+ R V I A L Sbjct: 122 QLEARTLETFVFEWLQAREWSPSFYERAQLFHIDLHAKRRVMI--------------ASL 167 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 ++ + ++ + + S V+++ + +D ++R I M+ + Sbjct: 168 KETKQTISVDMWKYVQTVWSDARDVIVRWGNDRLLILQTDDDKERTIAKIKTMQRALLDK 227 Query: 246 FRVSLGNYFTGPGSIA------RSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + V+L G G + SY+ A+ + + KQ F +DL L + L+ + Sbjct: 228 YDVTLH---IGCGKMGDSKQAYHSYKQAERALHIAKQ---TGDIVFDEDLRLDMCLEDIS 281 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + R +A + + LL TL +F +N+ T++AL IH NTL YRL ++ Sbjct: 282 LATKQELIKRTIAPF--IHDEQLL-HTLRTFFSNNLSLKQTAEALHIHINTLHYRLKKVQ 338 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEE 384 E T L++ + + + LY+A++ +E Sbjct: 339 EYTNLNVRHIEHVVTLYLAIRFLDE 363 >UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EML2_OCEIH Length = 380 Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 107/381 (28%), Positives = 189/381 (49%), Gaps = 26/381 (6%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A I+ +ID I + D G II S + RIG+ HEG+ +V+ + + I +++ Sbjct: 6 LADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLTI 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 L GV+ GINLPL ++GVIG+TGE E ++ +GE+V E+++ ++ + + Sbjct: 66 DLQGVKTGINLPLFFNKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFEH 125 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDL---NQPRVVAIVEVDSG-QLGVDSAMAEL 185 R E ++ +L+Q+ + T L + A+ LG+ L Q ++ I E+DS Q + + +L Sbjct: 126 RAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSKQVIILVINEIDSTLQKQIWHYLKDL 185 Query: 186 QQLQNALTTPERNNLVAIVSLTEMV-VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ LT N L + +L+ + +KP + + E+H Sbjct: 186 IPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENH----------------- 228 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 F + L S + YR+ + ++ ++R F+ DL L + L + D + Sbjct: 229 -FSIDLNIGVGDTASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKK 287 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R + L +++N LL +TL + + T++ALFIH NTL YRL++I + TGL Sbjct: 288 EYIQRTIGTL--IEHNQLL-QTLHVFIENESSLQKTAEALFIHINTLHYRLSKIHQFTGL 344 Query: 365 DLGNFDDRLLLYVALQLDEER 385 D F D LY+A+ +E Sbjct: 345 DPKRFKDLTNLYLAITFLDEH 365 >UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDC2_9SPIR Length = 387 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 104/389 (26%), Positives = 190/389 (48%), Gaps = 33/389 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L+T AQ ++ + M + NIN+M+ G II SGD RIG++H GAL VL +G+ ++ D Sbjct: 3 LNTITAQKLLKKIMDKLGYNINIMNEYGEIIASGDESRIGKIHSGALEVLKEGKDMEYFD 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + ++ + G+N+PL + EI+GV+G+TG P+ + K +V +TAE+++E+ L Sbjct: 63 FIDNNIESAKPGVNIPLFINNEIIGVLGVTGNPKEVGKIAAIVKLTAEILIEKE-----L 117 Query: 126 AQDSR-LREELVMNLIQA------EENTPALTEWAQRLGIDL-NQPRVVAIVEVDSGQLG 177 D + L++ + N I E P++ W ++ + N R+V +++ D+ Sbjct: 118 DTDKKILKQTSINNYINMMISKNNEHYIPSILIWLEKNNYQIENISRIVCLIKFDNNDYL 177 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSL---TEMVVLKPALNSFGRWDAEDHRKRVEQL 234 + + + + + + P N I+S E +++K SF + R + + Sbjct: 178 DKNRLNDY--IISKIKYPADFNSQDIISYFGDNEFILIK----SFDKKQYGSERSILNKF 231 Query: 235 ITRMKEYGQ----LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR-CYFYQDL 289 +K L F+ S G I+ SY AK V+ + SR +F +D Sbjct: 232 FLNLKNSFDNKLGLNFKASCGAVSKNINEISSSYEQAK--FVLNWNQYSNSREVFFIEDY 289 Query: 290 MLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRN 349 +L + S+ + R + LK + NN + T+ ++N+ TS L +HRN Sbjct: 290 ILEFYI-SVNDQSSLKMILRNV--LKIIKNNSNFKETIITMSKYNMSIAKTSSKLSVHRN 346 Query: 350 TLEYRLNRISELTGLD-LGNFDDRLLLYV 377 T+ YR+ +I ++ LD + N DR+ ++ Sbjct: 347 TIVYRMKKIKDILNLDPINNNIDRIKFHI 375 >UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R8_STAS1 Length = 405 Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 105/379 (27%), Positives = 186/379 (49%), Gaps = 30/379 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A IV T++ ++NIN+M+ G II S D+ RIG++HEGA VL+ G +V + + Sbjct: 50 LTDELAALIVEETVKRTNSNINIMNFNGEIIASFDKRRIGQVHEGARKVLASGDIVILSE 109 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 +L G + GINLP+ + +VGVIG+TG+P L +LV M+ E++L Q+ + L Sbjct: 110 EETSYLQGTQPGINLPIIFQDNVVGVIGITGDPSALVHVADLVKMSTELLLYQNYFTYEL 169 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 R +E L+ L+++E + + ++L + R I+ ++ S + L Sbjct: 170 EGQLRSQELLIEELLKSEPSQSFIQYLTKQLNVAFLTYRKCIIINLEKQIFSRSSIVQRL 229 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK--RVEQLITRMKEYGQ 243 ++ + T VA + +V+L E ++K R+ Q+ T + Sbjct: 230 AKIMDKATFA-----VAFTNYNHIVILAT-----DELQDELNQKIYRIHQVFTSL----N 275 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 L R++ FT +Y + ++ ++ + + ++D+ LL +Q Sbjct: 276 LDVRIASSLVFTSLNDFKNAYEECELVFMLNEENVSFAS---FEDVEEKTLL------YQ 326 Query: 304 ANELARPLAR---LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 NE R + L +DN + TL + F +++ T+K L+IHRNTL YRL + Sbjct: 327 INEEIRERYKKRILGELDNQSI--ETLKSLFENDLNIAQTAKYLYIHRNTLLYRLEKCKL 384 Query: 361 LTGLDLGNFDDRLLLYVAL 379 TGL+ + D + L +AL Sbjct: 385 QTGLNPKKYSDAIKLQIAL 403 >UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clostridium RepID=B2V472_CLOBA Length = 354 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 39/383 (10%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV + M +I N+N+MD G IIGSGD RIG LHEGAL L + V+I Sbjct: 2 LSKELAQSIVNKVMEVIPYNVNIMDEDGIIIGSGDVSRIGSLHEGALNALKNKKTVEI-- 59 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM--H 123 + + G+N+P+ +I+GVIG+TGEP+ + +G++V +TAE+++ Q + H Sbjct: 60 --FKDYEYAKAGVNIPILFRNKIMGVIGITGEPKIVSPFGKIVSITAELLISQEYTLNQH 117 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 ++ Q +L EE + + EE T + L ID+ R V IVE D +L + Sbjct: 118 IIKQ--KLIEEFIYEWLNINEEYTEEFVQRGMSLEIDIRIKRFVIIVEYDKSKLNEVNKF 175 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + +N + +N +A++ +E + ++ + +++E Sbjct: 176 IDKNLKENEYSINISSNKIALLLKSERIT----------------NNKIIKFYDKIQE-- 217 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-MLPVLLDSLRGD 301 L ++ +G +I S + +G + + Y Y ++ L + + G Sbjct: 218 -LSIKIGVGRV---HNAIINSLIDGVNALNIGNKLYEDKSVYVYDEIKFLHKMSLLINGK 273 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 ++ + L + L T + ++N + T+ + IHRNTL YRL +I E+ Sbjct: 274 YEKEIIDDILEEAMGKE----LLETFLIYMKNNGERAKTANEIHIHRNTLNYRLEKIEEV 329 Query: 362 TGLDLGNFDDRLLL---YVALQL 381 TGL ++ D L YV +L Sbjct: 330 TGLKFNDYLDLFQLITAYVGYKL 352 >UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU51_9BACI Length = 388 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 15/381 (3%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 T +A IV I+ + V+D G II + DR RIG HEGA + + G+ I Sbjct: 5 TGVASRIVNEVTEIVREEVIVVDQTGTIIAASDRNRIGNFHEGAKIAVDTGKHFIIRKRD 64 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 L GV+ G+NLP+ ++G VGVIG+TGEP + ++G+L+ E++++++ LL Sbjct: 65 VPKLKGVKAGLNLPIMIDGSAVGVIGITGEPSKVIQFGQLIQRMTELIIKEAYSSELLDS 124 Query: 128 DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187 R E V + ++ E + LGI L++P+ ++++ L A + Sbjct: 125 KHRGYETFVYEWVNIQDVDFEFRERGEILGIRLDRPKCCILIDLMEKHLTHQDGSALKRA 184 Query: 188 LQNALT-----TPERN--NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 +T E+N + V +V+K DA+ + ++Q++ + Sbjct: 185 TDQTVTDYLRLAFEQNPQDFVVPWGAGRFMVVKDMNEPV--QDAKLIERELKQILQEIDR 242 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 Q + + +G P + RSY+ AK + + + FY +L L + L + Sbjct: 243 QFQFQAQAGVGTVVHVPEELRRSYQEAKRAI---SAKGHSEKVVFYSELSLELALAEIST 299 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + + + ++ N L TL + HN++ T++AL IH NTL YRL RISE Sbjct: 300 MTRERLIEKVIG---SIMNEKDLMDTLDVFIEHNLRLKPTAEALHIHINTLHYRLKRISE 356 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 LTG + +D + LY+A+ Sbjct: 357 LTGKSVKRTEDIVSLYIAVHF 377 >UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03T99_LACBA Length = 346 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/382 (29%), Positives = 180/382 (47%), Gaps = 55/382 (14%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD K+AQDIV + M I N+N+MD +G II SGD +R+ LH GA+ ++Q + + D Sbjct: 3 LDPKLAQDIVNKMMTQIPYNVNMMDDQGYIIASGDPQRLNTLHVGAVAAINQQTTLPMHD 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + H + G+N+P+ +I+GVIG+TG+PE + L+ + E++L+Q++ H L Sbjct: 63 SYGDH---GQPGVNMPIVFNDQIIGVIGITGDPEKVTPLASLLRVATELLLDQNQ--HNL 117 Query: 126 AQDSRLREELVMNLI---------QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 + + E +N Q + NT L E AQ+LGID+ +PR ++ + + Sbjct: 118 QEK---QYETTLNRFLYHWSQVTQQIDTNTNLLLE-AQQLGIDILKPRAAIVLPKQTLPI 173 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 G+ A Q L T T ++VL + R+ T Sbjct: 174 GLLDAT----DFQFDLDT------------TTLIVLTALPATIARF-------------T 204 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + GQ R + L + ++ S R A+ T+ + + ++ Q + LLD Sbjct: 205 TYCQTGQHRLGIGLFD-----RNVGNSVRQARQTLRISQIFQRPDFIHYSQIAFIQALLD 259 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 G +L + +L + N L +TL + R N L T+ AL IHRNTL YRL+ Sbjct: 260 ---GHLHVTDLQQRFQKLASTANGRELIKTLGMFVRLNTNVLQTAAALHIHRNTLSYRLD 316 Query: 357 RISELTGLDLGNFDDRLLLYVA 378 R+ ++ LD D LYV Sbjct: 317 RLQQIFQLDPHQTLDLFTLYVG 338 >UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB72 Length = 398 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 114/385 (29%), Positives = 183/385 (47%), Gaps = 16/385 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ+I RI N+ + D +IG GD R+G +HE +L V+ GR Sbjct: 10 LTPQLAQEIAHDIGRITGFNVLITDPGAVVIGCGDLSRVGTVHEASLEVVRTGRPAIHTA 69 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ-----SR 120 A + GVRQG++LP+ + E++G + LTGEPE + ++G +V AE++LE+ SR Sbjct: 70 GQASRMRGVRQGMSLPITVGEEVIGTVCLTGEPEEVDRFGLVVRRQAEILLEEAALLRSR 129 Query: 121 LMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 ++H A D +R+ + L E + A+ A LG+ R ++EV + G Sbjct: 130 MLHERAVDDFVRD---IALYDPEVVDAGAVDARAVELGLAPGAARAALLLEVRAADEG-- 184 Query: 180 SAMAELQQLQNALTT-PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH-RKRVEQLITR 237 +AM+ + L+ +R ++ + VVL A +G A QL++ Sbjct: 185 AAMSRITVLRTVREVFRDRQDVAGEQAAGRYVVLAAA---YGERTAPGRLADACGQLLSL 241 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + E L R+++G TG + SYR A T + G P R Y +L +P LL S Sbjct: 242 LHERHGLDGRMAVGEPGTGTTGMHHSYRDAATALRTGPAVFPGDRVYTASELRIPHLLGS 301 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 +A L L+ + LR TL W + +++ L IHRNTL YRL + Sbjct: 302 TPRHGRARFADAVLGDLRGQPDWPTLRETLIGWAEGGFHLVRSAERLHIHRNTLLYRLEK 361 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 I +L+G + + +Y+A D Sbjct: 362 IGKLSGKRVREPVQAIEMYLACLTD 386 >UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0Z8_EUBE2 Length = 390 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 108/390 (27%), Positives = 188/390 (48%), Gaps = 27/390 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG---RVV 61 H+ A IV +++ NIN+MD G II S D+ RIG+ H GA ++S+ + Sbjct: 2 HISKNSATQIVEEISKLVKQNINLMDETGHIIASRDKSRIGDFHYGAYKIISENLEEYYI 61 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 D DD G+++GINLPL L+G IVGVIG+TG E + G+L+ E++L +SR Sbjct: 62 DEDDLSK----GIKKGINLPLELDGGIVGVIGMTGGYEEVITSGKLLKKMTEILLMESRA 117 Query: 122 MHLLAQDSRLREELVMN-LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + + R+R LI L + LGID+N+PR V I +D DS Sbjct: 118 NYRQLMNKRVRNAFYEEWLINGGYKNADLEDRGMALGIDINKPRRVFIASIDELDNLKDS 177 Query: 181 --AMAELQQLQNALTTP-ERNNL-VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 +++ + +N + +RNN + + + +++ D E+ K +L Sbjct: 178 QQGQSQIAKFENDVDAFLKRNNYKMHFRNASRQIII------IDNMDTENVVKFAGELAG 231 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + E + +F +++G + +Y A ++ + C Y+D+ L +L+ Sbjct: 232 YVWE--KDKFELNIGIDSAQSYDMHEAYVEAHRAWTAAAEKHEQIIC--YEDISLELLIS 287 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRT--LAAWFRHNVQPLATSKALFIHRNTLEYR 354 ++ + + L + K MD N + L A+F + L+IH+NTL+YR Sbjct: 288 NVPTEIKLEYLKKV---FKDMDYNDVCENIALLKAYFNAQGSIQKAADNLYIHKNTLQYR 344 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQLDEE 384 ++++ E+TGLD+ + LY+A + +E Sbjct: 345 ISKLKEITGLDVRKPTESPALYLAYIITDE 374 >UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLC5_9FIRM Length = 368 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/392 (25%), Positives = 184/392 (46%), Gaps = 41/392 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + + + +A IV + + NIN + G II S D RIG HE G + Sbjct: 4 IMSYPISRPLASQIVDAVSDVCEKNINFITPDGEIIASTDSSRIGTYHEIGRRAAQSGTL 63 Query: 61 VDI-DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVC-MTAEMMLEQ 118 ++I D++ G + GINLP+ GE++ +IG++G+P+ + KY L +T ++ E Sbjct: 64 MEIPQDSLYP---GTKAGINLPVYHNGELLAIIGISGDPKEVSKYAHLAERITRLLVCES 120 Query: 119 SRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDS--GQ 175 +HL + + R L+ L++ TP L L ++L P + ++++ Q Sbjct: 121 EGNLHLRDLEQK-RGYLIQKLLKGAPITPEDLETLPSDLNLELQTPSRILLIQLGHQFPQ 179 Query: 176 LGVDSAMAELQQLQNAL-----TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 G+ + E+ L +L +AI+ ++ + L+ FG E H+ Sbjct: 180 TGIPAVEPEIYHLFRSLELTLYCFQYPREYLAILPEPKLTNCRETLSHFG----EKHKGS 235 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 + I + T P + SY+T + + + ++ S C F+ L Sbjct: 236 LCMGIGKC----------------TSPQQLMHSYQTCQ--IALKSAQLSGSSCVFFDQLY 277 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L +LL + D Q +R ++ L + D R L ++ N+ +A + L++H+NT Sbjct: 278 LELLLSDVSSDLQQEYFSRTVSHLSSED-----RELLLVYYEENMSLVAVCERLYLHKNT 332 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 L+YRLNRI ++TGL+ +F+D ++LY+ L+L Sbjct: 333 LQYRLNRIRKVTGLNPRDFEDAVILYLGLKLS 364 >UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1G6_9BACT Length = 432 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 47/412 (11%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 K AQ+I + T II N+ + D GRIIG+ ER+G+LHE +L V G + A Sbjct: 15 KCAQEIASSTAAIIGHNLIITDVDGRIIGASQTERVGQLHEASLEVARTGTASETTREQA 74 Query: 69 RHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 R G G+ P+R L G VG + LTG P+ +R +G +V E++L + R +H+ + Sbjct: 75 RLFRGTLPGVTFPIRNLNGRTVGTMALTGSPDEVRPFGLIVKKQIEILLRE-RELHVYSS 133 Query: 128 DSRLREELVMNLIQAEE-------NTPALTEWAQRLGIDLNQPRVVAIVEV--------- 171 RE ++ NLI E N L A LG D + + +V++ Sbjct: 134 S---RESIIQNLIHDLETFVPGVGNETMLQSRAIELGYDPSLFYIPIVVDLYQFGRYALA 190 Query: 172 --------DSGQ-----LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 DSGQ L V A+ L +++ + P +N+ +I V L A+ Sbjct: 191 VRRECRDGDSGQVEMRILNVKKAI--LAEMRGVFSHP--HNISSISGNNRFVTLH-AVKD 245 Query: 219 FGRWDAEDHRKRVEQ-------LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM 271 R D + + + Q L+ R+++YG L+ + +G+ +++ S A+ + Sbjct: 246 ADRADPQHEKAALAQVVELSRSLLDRLEDYG-LKAAIGIGSPAHSIAALSISCHEARKVL 304 Query: 272 VVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWF 331 ++GK+ Y D + ++ ++ + + L+ + L +T+ AW Sbjct: 305 MLGKKFKQRPDVYCIADFRMEDVISTIDAPVRIRFIKALTGNLRAKSDWPELEKTIRAWC 364 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + T++ L IHRNTL YRL +I LTG D+ +F Y AL L + Sbjct: 365 ESGFSLVGTARRLHIHRNTLIYRLEKIERLTGEDIHSFPACFNFYFALLLGQ 416 >UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus subtilis group RepID=YSFB_BACSU Length = 368 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/389 (24%), Positives = 184/389 (47%), Gaps = 54/389 (13%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A+ I+A ++ + + +++ G I+ + ER+G+ HEGAL+ + R V I Sbjct: 7 LAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGALICAKERRSVIITKEDET 66 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 L GV+ GINLP+ + +++ V GLTGEP ++ +GEL+ E+ +++SR + Sbjct: 67 RLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQPFGELLRKMTELFIKESRHLEQSQWRE 126 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 R+ E +++ +Q +E +P+ E AQ LG+DL+ R + +++ G + + +++Q+ Sbjct: 127 RMLESFMIDWLQLKEWSPSFLEKAQLLGVDLSSRRQMILIQ------GYEWSPHDIEQMA 180 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE-----------DHRKRVEQLITRM 238 + + +L F RW E + R R+ + I + Sbjct: 181 RSWKSSYPADL------------------FIRWGNERILINHEVPQHEQRDRLLRKILHI 222 Query: 239 KEYGQL---RFRVSLGNYFTGPGSIARSYRTAKTTMVVG-KQRMPESRCYFYQDLMLPVL 294 + ++ + S+ SY A+ + V K++ P F +DL L + Sbjct: 223 CSFANTASSQYTAAGAGRAVASSSLTDSYEQAEKALAVSLKRKTP----IFEEDLKLDMC 278 Query: 295 LDSL----RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L + R ++ L + L + M+ T+ +F H++ T++ + IH NT Sbjct: 279 LTEISPGTRNEFPQRVLGKALEHQELMN-------TIRTFFHHDLSLKQTAEDMHIHINT 331 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L YRL + +LTGL +D + +YVAL Sbjct: 332 LRYRLAKAEQLTGLRFDRTEDVVTMYVAL 360 >UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK20_BACSK Length = 363 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/365 (27%), Positives = 171/365 (46%), Gaps = 41/365 (11%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A +IV RTM I+ +N+N+M+A G +I SG+++R+ +H A+ VL G+ + I+ Sbjct: 2 LTHELANEIVTRTMDIVPSNVNIMNAEGAVIASGEKKRLFNIHSIAVDVLRTGKSISINP 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 V G + GINLP+R +G+ VGVIG+TG P + Y ELV M AE+++ Q+ L L Sbjct: 62 TVDCP-SGTKPGINLPIRFQGKSVGVIGITGNPVEVAPYAELVQMAAELLVNQAYLSEQL 120 Query: 126 AQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 Q+ R+ +L+ L+ E EN A E Q G+D + + + L Sbjct: 121 RQNERIAYQLLRALVVGEVENERAFMERLQATGLD------SLFLPLRAWALSKAHEQTF 174 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++L + ER L ++ KR E + + Sbjct: 175 PKELGHFFQYEERGELFF-------------------FETRPEEKRFESFLQK----NNC 211 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP--ESRCYFYQDLMLPVLLDSLRGDW 302 + G G++A S A+ + + ++ +P E R ++++ M L+ L +W Sbjct: 212 LLIATSGPVAHSFGTVASSCNIARAALSLYEEDVPTTEKRLLYFEETM----LEGLAFEW 267 Query: 303 QAN----ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 Q + L+ L + + L T+ +F HN + F+H NT+ +RLN+I Sbjct: 268 QQSGTIQPFLALLSPLLASNQSAELMETIKQYFIHNGDIKKIANHQFVHSNTVHHRLNKI 327 Query: 359 SELTG 363 LTG Sbjct: 328 KALTG 332 >UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoanaerobacteraceae RepID=B0K2X2_THEPX Length = 381 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/386 (26%), Positives = 180/386 (46%), Gaps = 29/386 (7%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 Q IV R M I+ NIN+MD +G II SGD RIG HEGA + S+ V IDD+ + Sbjct: 8 QKIVNRLMNILGKNINIMDTKGVIIASGDSTRIGSFHEGAKIAASRKIDVIIDDSNIEYY 67 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 G ++GIN+PL GE++GV+G+TGEP+ + +G ++ E+M+++ A SR Sbjct: 68 KGTKKGINIPLFYNGEVIGVVGITGEPKEIIGFGRIIKELVELMIQEYENKKYEALHSRA 127 Query: 132 REELVMNLIQ----AEENTPALTEWAQRLGIDLNQPRVVAIVEV---DSGQLGVDSAMAE 184 + ++ E L A+ +G D+ + R + + ++ + L + + Sbjct: 128 MVSFIKEILNHPNIGHEEEKILKSRAKLIGFDIKKQRSLIVADIRGFNDFILSKNLKEID 187 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +Q+L+ + ++ L + E+V N R+ K ++E + Sbjct: 188 IQELKENIVEFIKSKL----NHDEIVF---NFNE-DRFVIMLSSKNPMPFCKELQEGVKK 239 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ-----RMPESRCYFYQDLMLPVLLDSLR 299 +F +S G G + + T+ + + R + ++D + +L+ SL Sbjct: 240 KFNLSC---IIGIGPDCKDIKNYHTSFTIANKLIDIGRKIDKDILDFKDYKIELLIHSL- 295 Query: 300 GDWQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 N+ K + N N + T+ +F + SK LFIHRNTL YRLN+ Sbjct: 296 ---SINDSIIFFEEYKDILNSKNKDIINTIKVYFESGMNINLASKKLFIHRNTLTYRLNK 352 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDE 383 I E +D+ N + +Y+++ +++ Sbjct: 353 IKEEFNVDITNPYVCMKVYISILINQ 378 >UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B5K4_9BACI Length = 372 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/385 (28%), Positives = 190/385 (49%), Gaps = 34/385 (8%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ--GRVVDIDDAV 67 +A+ I+ ++ I V++ G I+ S +R+G HEGAL + + R++ DD Sbjct: 6 LAEKILREVRGVLKEEIIVVNTDGIIVSSTSPDRVGAFHEGALQSVKKRDKRIITADDE- 64 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 + L GV+ GINLP+ + E+ VIG+TG+PE + YGE++ E+++ ++ + Sbjct: 65 -KKLKGVKAGINLPVFFQKEVAAVIGITGDPEKVAPYGEIIRKMTELLISENFYSEQIDW 123 Query: 128 DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187 SR E V + +Q + + + A L +D R+V I E + + + Sbjct: 124 QSRALEGFVFDWLQERGHGSSFIDRALMLKVDTRLDRLVFIAEFLEPE-----KIPSREI 178 Query: 188 LQNALTTPERN-NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 Q L+ PE+N N + I + +V A +S E+H +R+E ++R Y Sbjct: 179 WQRLLSWPEKNSNDLFIRWGHDRIVALFAHHS------EEHIQRLEDRVSRYYSY----L 228 Query: 247 RVSLGNYFTG-------PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 S G+ +G +++RS+R A+ + K+ F ++L L +L+D ++ Sbjct: 229 DRSSGSPLSGGAGQPAASSALSRSFRQAERAVKAAKK---ARGLRFDKNLTLEMLMDEIK 285 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + + + R + L+ + + TL FR N T++++ IH NTL YRL +I Sbjct: 286 PETKLDYIKRTIGPLQQHPD---VLATLKELFRQNHSLKKTAESMHIHINTLHYRLRKIE 342 Query: 360 ELTGLDLGNFDDRLLLYVA-LQLDE 383 +LTGL GN +LY+A L LDE Sbjct: 343 DLTGLGTGNAQQLFILYMACLLLDE 367 >UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCX7_BACSK Length = 371 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 40/378 (10%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +AQ I+A ++I ++ +++ G II S D R+G HEGA L +++ R I A Sbjct: 6 LAQKIIAEASQLIKEDLIIVNRDGYIIASTDPNRVGTFHEGASLCMAERRKRLITANDAT 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 HL GV+ G+NLP+ + ++ GVIG+TGEPE + YGEL+ E++++++ +M + + Sbjct: 66 HLKGVKPGLNLPIVVFQQVAGVIGITGEPEQMEPYGELLRRMTELLIQEAHMMEQMQWQT 125 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL-QQL 188 R + V ++A T L A +D+ + + ++E + +A+ +Q Sbjct: 126 RALQGFVQEWLEAGALTEPLKRQAAAHSLDVQTEKQIVLIETGLEESIHWRGLAQWREQR 185 Query: 189 QNALTTP-ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 + + P ER ++ + S LK +++ Sbjct: 186 KGMIAIPWERKKVLLVCSPQTETALKATVHTLAE-------------------------T 220 Query: 248 VSLGNYFTG-------PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +++G + G P I +SY A+ +V ++ +R F +L L + ++++ Sbjct: 221 LAIGGSWWGGAGRALPPDEIKKSYAEAQAALVAARKT---NRFVFEHELKLELCVEAIPA 277 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D +A + R L K D LL TLAA+ ++ T++AL +H NTL YR ++ + Sbjct: 278 DTKARFVERVLK--KVSDEQELL-GTLAAFLENDQSLKRTAEALHVHINTLHYRFQKLKQ 334 Query: 361 LTGLDLGNFDDRLLLYVA 378 TGLD+ +D +L Y+A Sbjct: 335 HTGLDVRKSEDFVLFYLA 352 >UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostridium butyricum RepID=C4IGN6_CLOBU Length = 355 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/374 (25%), Positives = 187/374 (50%), Gaps = 32/374 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L+ ++AQ IV + ++ NIN+MD G IIGS ++ RIG +H GA L++ + V+I Sbjct: 2 LNKQIAQKIVDKISTVLPYNINIMDKEGIIIGSSNKNRIGTIHYGAAEALTEKKEVEI-- 59 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 V+ G+N+P+ + EI GVIG+TG PE++ +G+++ +T+E++L + + Sbjct: 60 --YNEDEFVKPGLNIPIFFKDEIEGVIGITGNPEDISAFGKIIKVTSELLLSEQYSLKSA 117 Query: 126 AQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + L+EE + I +E Q + ID+ +P+ VA++ + + + E Sbjct: 118 LKKEMLKEEFLYEWIYLKEKYNNEFILKGQSINIDILKPKRVALIL--HKNIKSSTILRE 175 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +++ E + + + +++LK D ++ + R+E + M++Y + Sbjct: 176 VKRY-----IYEDDYYIKLSDEKLILILK---------DNKNFKNRIELISDNMEKYS-V 220 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + VS N ++ +S+ A T+ + + F+ + L+++ + Sbjct: 221 KIAVSSSN-----ENLNKSFIEAMDTLNIISAVYKSKKILFFDSIR---LINNSIMNLNY 272 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 +E+ + +L + L TL + N + S+ L IHRNTL YRLN I E+TGL Sbjct: 273 SEIEKMKNKLYEQNGGKELLETLLKFIEFNGEKNKVSEILHIHRNTLNYRLNNIEEITGL 332 Query: 365 DLGNFDD--RLLLY 376 L ++ D +L+L+ Sbjct: 333 KLNDYMDLYQLILF 346 >UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicutes RepID=C5VPL2_CLOBO Length = 351 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 105/386 (27%), Positives = 187/386 (48%), Gaps = 52/386 (13%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A+ IV R M ++ NIN+M+ +G II SGD+ RIG+LHEGA+ + + ++ + Sbjct: 4 LTKQIAESIVDRMMNVVPYNINIMNNKGVIIASGDKSRIGQLHEGAVDAIKRDKL----N 59 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + + G + G+N+P+ ++GVIG++G P + + +V TAE++++Q + + Sbjct: 60 LIYKDNGGAKPGVNMPIYFNKNLMGVIGISGNPNEVVSFASIVKATAELLIKQDYMFN-- 117 Query: 126 AQDSRLREELVMNLIQA-----EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + R+RE++ + + + ++ LGIDL+ R+ IV +G D Sbjct: 118 --ERRIREQIEEEFLYQWSYLDRKYDEGFIQRSEVLGIDLSVKRLAVIV------IGEDK 169 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + + ++N + + E I E +++ F + D E KRV L ++ Sbjct: 170 SRI-MNIIKNYIYSCE----YTIRFNAESILI------FMKSDKELF-KRVLSLYNKLG- 216 Query: 241 YGQLRFRVSLGNYFTGPG----SIARSYRTA-KTTMVVGKQRMPESRCYFYQDLMLPVLL 295 GN G G + S R A + + K + C + + + ++ Sbjct: 217 ----------GNVKIGVGLEEEIMTNSVREALRAIEINNKLSLNYDICKYSEVSFIDIIS 266 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 +++R + N L L K +D L +TL + N + ATS+ L IHRN+L YRL Sbjct: 267 NNIRYEENIN-LIEKLKSFKNLD----LVQTLILYIMLNCEITATSEKLHIHRNSLSYRL 321 Query: 356 NRISELTGLDLGNFDDRLLLYVALQL 381 +I E+TG D N D L L++A L Sbjct: 322 KKIYEVTGKDPKNIMDLLQLFIACIL 347 >UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus coagulans 36D1 RepID=C1PB42_BACCO Length = 361 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 43/390 (11%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L K+A IV ++D +I V+D G I+ S ++RIG H GA V + + ID+ Sbjct: 3 LFPKIAGKIVNEVQSVMDEDIIVVDENGVIMASTQKDRIGNFHMGAQKVFQTNKKLYIDE 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 +A + GVR GIN+P+R EG +GVIG+TG P+ + Y EL+ E++++++ Sbjct: 63 EMAAQMEGVRMGINMPIRFEGRTIGVIGVTGNPKEVEHYAELIRRLTELIIQETVHAEQA 122 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV---DSGQLGVDSAM 182 +R E + E LGI + P + +++ SG+ + Sbjct: 123 RSKTRGLEAYFYEWATVKAYDQHFVERGLMLGIPMQVPHICCFLKMAVPPSGETEI---- 178 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 ++LQ+ + T +R+ +V P L K VE ++ + YG Sbjct: 179 --FERLQSYIET-DRDMIVH---------WSPGLFLL--------LKSVEAPFSKERFYG 218 Query: 243 QLR-FRVSLG-NYFTGPGSIARSY-------RTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 QL F+ N G G A +Y K V GK FY+DL+L + Sbjct: 219 QLEDFKRRFAPNCAVGVGKTAGTYVIRQSFKEAQKALKVAGKN----GGIVFYEDLLLDL 274 Query: 294 LLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 L++ + + + L + +A+L+ + L TL A+ +N+ T+ L +H NTL Y Sbjct: 275 LIEEVSEEARQEYLQKTIAKLQ---EHAGLAETLQAYLANNLSLKETAAQLHVHINTLHY 331 Query: 354 RLNRISELTGLDLGNFDDRLLLYVALQLDE 383 RL +I+E+TG+D + L Y+A+ L E Sbjct: 332 RLKQITEVTGIDPKTAEGIALFYLAVHLAE 361 >UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicutes RepID=C6PUN4_9CLOT Length = 343 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 104/362 (28%), Positives = 165/362 (45%), Gaps = 42/362 (11%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARH 70 AQ IV + M +I NINVMD G IIGSGD +R+G+ HEGA + + ++ D Sbjct: 8 AQKIVQKMMEVIPYNINVMDEDGIIIGSGDIKRVGDAHEGARKAIENCAINEVYD----D 63 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 G++ G+N P+ L+ +++GVIG+TG P+ +R++ +LV +TA +++EQ++ + Q+ R Sbjct: 64 KEGMKPGVNEPIILKDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQAKANEEV-QNKR 122 Query: 131 LREELVMNLIQAEENT--PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 L + + +N E A+ G+D+ + +V+ G L Q Sbjct: 123 LNMQKFYQELAHRKNEYDEEFYEKAKSYGLDITKKCQTIVVD---GDLNSKEFKRICQGY 179 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 N E N V ++ DH ++ +K+ ++ ++ Sbjct: 180 SNYFDL-ENNKTVFFIT-------------------NDHEYNT--VLNNLKD-SKVVNKI 216 Query: 249 SLGNYFTGPGSIAR-SYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL 307 SLG G IA S A+ M G + P + Y Y++ + L + L Sbjct: 217 SLG----GQQDIAAVSLENAQMAMEFGMKMKPSYKIYNYEEFKFFIHLSYDNKE----SL 268 Query: 308 ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 A L NN L TL A+ N + L IHRNTL YRL RI +LTG + Sbjct: 269 VSLFANLDKSGNNIELIETLQAYIEENGDINNVANKLNIHRNTLNYRLERIHKLTGKNPK 328 Query: 368 NF 369 F Sbjct: 329 TF 330 >UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JN28_FUSVA Length = 363 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/383 (25%), Positives = 189/383 (49%), Gaps = 31/383 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR--VVD 62 ++ +A +I+ + II ++N +D G II S +R G H L + + +++ Sbjct: 2 NISVSLATNILNKMKEIIHQDLNYIDKSGIIIASTAPDRTGTFHAAGLKSIKEKTPIIIN 61 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 DD HG R+GIN+P+ IVG IG++G+ + KYGE++ M E++++++ + Sbjct: 62 SDD----EFHGSRKGINMPIYFNDTIVGAIGISGDKNEVEKYGEIIKMMTEILIKEAWI- 116 Query: 123 HLLAQDSRLR-EELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVD-SGQLGVDS 180 +DS +R +E+ I E ++ D P V + +++ + V+ Sbjct: 117 ----KDSDIRAKEINRTFI---ERIVLGYDYDFFPTTDFTFPYAVVVGKLNKNNSFLVND 169 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + ++ L+N+L+ + N + +S E+++L + + E+ K + QL ++ E Sbjct: 170 KIYDI--LKNSLSHNKNN--IYTISRNEIIIL------YHFYKDENISKTIFQLQEKLLE 219 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +L FR +G S+ SY+ AK + + + Y+ + L + +L+ Sbjct: 220 KTKLDFRFGIGTKAFEYSSLKESYKAAKEILNFMIKFSIKKSVSEYEKMDLEFIFLNLKK 279 Query: 301 DWQANELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 N R L K ++ LL + ++ +N L TS+ALF+H+NTL+Y+LN+I Sbjct: 280 SDIENFTNRILKNFTPKEIEEFSLL---MNSYEENNGSILHTSEALFMHKNTLQYKLNKI 336 Query: 359 SELTGLDLGNFDDRLLLYVALQL 381 +L+G D + D ++L +A +L Sbjct: 337 KQLSGYDPRHLKDFIVLSLAFKL 359 >UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FDZ6_BACP2 Length = 374 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 21/375 (5%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG--RVVDIDDAV 67 +A+ IV +++ I + G II + D RIG+ HEGA L +G R++ DD Sbjct: 3 LAEKIVDEVKKVLTEEIIIAQTNGTIIAATDPARIGQFHEGAYLTSFEGQKRILTKDDE- 61 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 + + GV+ GINLP+ + E++GVIG+TG P ++ +GE++ E+++++ Sbjct: 62 -QRMKGVKAGINLPIYFKQEVIGVIGMTGNPIHVSPFGEILRKMTELLIQEHEFFLETET 120 Query: 128 DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV-DSGQLGVDSAMAELQ 186 D R E V + + E LTE A RL +D+N RVV +++ D + D + + Sbjct: 121 DERQLEAFVFDWLHLPETAIDLTEKAARLQLDVNMQRVVVLIDCHDESFMKQD----QYK 176 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 +++ L + +V +++L+ + N D + ++R+ + + + Sbjct: 177 KVKEMLHLTHQEMIVRWGHARFLLMLQTSAN-----DRDTLQQRLFHIHAALTARSTSKV 231 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANE 306 + G G + +S+ A + + P F +DL L + ++ + + + Sbjct: 232 LIGAGKPAAG-QMMKQSFHQAFRALKMANADTP---IVFDEDLTLELFIEEVSQETKEVF 287 Query: 307 LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L R + L L +TL + T++A+ +H NTL YRL RI +LT LD Sbjct: 288 LDRTIVPLLPYPE---LVKTLRVLMTSDCSLKYTAEAMHVHINTLHYRLKRIQDLTTLDP 344 Query: 367 GNFDDRLLLYVALQL 381 D +L Y+AL L Sbjct: 345 KRMQDAMLFYLALML 359 >UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P5T7_9LACO Length = 350 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 45/378 (11%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV M I NIN+M+ G II SGD RI LH GAL + QG+ + ++ Sbjct: 3 LKPELAQSIVDHMMSQIPYNINIMNENGYIITSGDPTRINTLHIGALDAIRQGKTLPME- 61 Query: 66 AVARHLHGV--RQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 LHG + G+N+P+ + +I+GV+G+TG+P + L+ E++L QS Sbjct: 62 ----RLHGQHGQPGVNMPITYDDQIIGVVGITGDPAKVVPLASLLKTAVELLLRQSTAAQ 117 Query: 124 LLAQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + ++ ++ + +LIQA + T L A++ +DL Q V + +D Sbjct: 118 RKQESAQNQQRFLYHLIQATQTQAPTSELIATAKQFKLDLTQAHTV---------IAIDC 168 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + EL +L N N ++ + + +V++ L R+ ++L + ++ Sbjct: 169 QLNELARLNN----DPANLMLMLTNRVGLVIIHDPLTC---------RRLQKRLASAHRQ 215 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +G VS G ++ A TT+ + +Q + + Y+ + LL LR Sbjct: 216 FG-----VSESGILIG-----KAVTEAATTLRL-RQNLDDETITSYRQIRFYDLL--LRA 262 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + L T ++ L T+ + R ++ T+K LFIHRNT+ YRLNRI + Sbjct: 263 NLPVQGMVDRFNELATSNSGRELIATIWEFIRSDLNVNQTAKHLFIHRNTVNYRLNRIQK 322 Query: 361 LTGLDLGNFDDRLLLYVA 378 + L N D L++ Sbjct: 323 IFKLTPQNATDLFKLFIG 340 >UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N6A9_9FIRM Length = 359 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 97/381 (25%), Positives = 184/381 (48%), Gaps = 41/381 (10%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +++ ++A IV I D +IN +D +G I S D +RIG HE LL + + R++++ Sbjct: 15 YINNQLATQIVETVKDICDHDINFIDCQGIIYASTDIKRIGSFHEAGLLAIKEKRIIEVY 74 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 D + +G QG+NLP+ +I+ VIG++G+P+ ++KY L +++ + L Sbjct: 75 DDTS--FNGSLQGVNLPVYYHDQIIAVIGISGKPDKVKKYAYLAQKITNLLIREKELNEF 132 Query: 125 LAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDL-NQPRVVAIVEVDSGQLGVDSAM 182 + L+ +L+ E ++ ++ + +DL N R++ I+ + S + Sbjct: 133 NRSQAEKMHYLLQSLLDQENLDSQYFSDMLKYFQLDLKNNYRLLIILA--KRLVNEQSII 190 Query: 183 AELQQLQNALTTPER-NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 EL L + + N +AI+ DA D+ R E ++K+ Sbjct: 191 QELHSLAIPVYHYQYPNRFLAII------------------DA-DYFNRCE---YKLKKL 228 Query: 242 GQLRFRVSLGNYFTGP-GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + +++G P ++ SY +A ++ + + + + Y L L ++L S+ Sbjct: 229 AGNQVSIAVGK--QIPLIKLSESYHSA----LIALRNIQDHQYINYDVLTLEIILQSISI 282 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + L + +A L D N L +F ++ L T+ LFIH+NTL+Y+L+RI + Sbjct: 283 YDKKDYLNKTIAMLSLEDLN-----LLHIYFEEDMSLLNTANRLFIHKNTLQYKLDRIHK 337 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 L G + F D +LY+AL+L Sbjct: 338 LCGYNPRKFRDANILYLALKL 358 >UniRef50_C1B522 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B522_RHOOB Length = 380 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 111/381 (29%), Positives = 165/381 (43%), Gaps = 61/381 (16%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR--VVDIDDA 66 ++AQ +V +D NIN+MD GRIIGS DR RIG +H GAL + GR +VD D+ Sbjct: 20 ELAQRVVDEVSPRLDYNINLMDRNGRIIGSVDRTRIGTVHAGALHAIRDGRRVLVDADEQ 79 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHL 124 A VR GIN+PL L+G IVG +G+TG+P + ++ +T E++L EQ R Sbjct: 80 SA----DVRAGINIPLTLDGRIVGAVGITGDPAEVESVCSVLALTVELLLRNEQHR---- 131 Query: 125 LAQDSRLRE----ELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG----QL 176 SR RE EL++ L+ L E + +G + P + SG L Sbjct: 132 --DSSRWREAAVRELLLGLVNGTVGENGLLEALRHIGSPMTPPWNITAAVPASGSGSWSL 189 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED-------HRK 229 +++A L+++Q A+ L+ V + ++ R D H Sbjct: 190 PSSTSVALLRRIQGEPGVVAAELQGAVWVLSSSVTDRTLAATWRRLRTGDVRLVTGRHAA 249 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 +L G L R +L +P L Sbjct: 250 SSRELSVDAARLGMLLTRAAL---------------------------LPTGEVTELSAL 282 Query: 290 MLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRN 349 + + + D + + R L L T LR T A+ HN+ +T+ AL +HRN Sbjct: 283 VPEIAVAQQSRDISHDTVERVLTPLSTT-----LRETARAFLEHNLSIASTATALQVHRN 337 Query: 350 TLEYRLNRISELTGLDLGNFD 370 TL RL+RI +TGL+L FD Sbjct: 338 TLVQRLDRIEHVTGLNLRTFD 358 >UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGK4_9LACO Length = 392 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/369 (26%), Positives = 166/369 (44%), Gaps = 41/369 (11%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L TK+AQ IV R M+ I NIN+M+ G II SGD RIG+LH A+ VL + +++ Sbjct: 40 LSTKLAQVIVDRMMKTIPYNINMMNDEGIIIASGDHTRIGKLHTEAIRVLRKNKILKFSH 99 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + V+ G+N+P+ + +GVIG+TG+P+ + + L+ + E++LEQ + Sbjct: 100 NDPK--ENVQPGVNIPVNFHDQTIGVIGITGDPQEVTPFALLLKSSTELLLEQQSFQQIE 157 Query: 126 AQDSRLREELVMNLIQAE---ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + Q + + T L + A L ID R V I++ + +L Sbjct: 158 ENKQNKLTRFLFRWTQKDIDFDTTQNLEKEALELNIDFYFERTVVIIKCSAKKL------ 211 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +L+ Q+ N ++ ++ +K +N A +H Sbjct: 212 LDLRLEQDNFHLNRSVNTQVLIC-KDLSTVKKCINF-----AHNH--------------- 250 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 +RV +G + +I +S+ A+T + + + + Y+ + + LL S D Sbjct: 251 --NYRVGVG---STTKNIGKSFYEAQTVIKIS-TLLDKDYIYYREVKFIQQLLTS---DL 301 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L + L ++ L TL + +++ T+ L IHRNTL YRL++I L Sbjct: 302 ADKTLVEKFSMLDNTESGTDLLNTLLTYLKNSGNMNKTASDLHIHRNTLLYRLSKIHNLI 361 Query: 363 GLDLGNFDD 371 GL+ F D Sbjct: 362 GLNPHKFTD 370 >UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D6A Length = 360 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 39/380 (10%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L+T+ AQ I M+II NIN+ D G I+ SGD+ +G LH+GAL L + I Sbjct: 5 YLNTENAQKIADGIMKIIPCNINITDTAGEILASGDKSTLGTLHKGALTALKRKEAYVIY 64 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + ++GI LP+ I+GVI + G+ E + G+ +C++ ++ ++RL+ Sbjct: 65 ENTPTE----QRGICLPIIYNNSILGVIAIGGDVEEVMPIGQ-ICLSIAVLTIENRLLSD 119 Query: 125 LA--QDSRLREELVMNL-IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 ++ ++SRL++ L + + E+ A + A LGID+ PR ++ + + Sbjct: 120 MSSIKESRLKDFLYEWISLSREQYDDAFYDQAAYLGIDMKIPRTAVVITSSRIRYSI--- 176 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 ++ +++ L E + + E+++L S R + R+E+++ K+ Sbjct: 177 ---IETIKSHLAAGE---YIVRQGMEEVLIL---FRSDKRL-----KSRLEKILDISKD- 221 Query: 242 GQLRFRVSLGNYFTGPGSI--ARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 L N + G I +R+ + T + + R Y ++ L LL+++ Sbjct: 222 --------LENCYIGESDIIASRTTNSVMQTFHIARALNIRRRILCYHEVSLECLLNNVE 273 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 EL L LK D +G+L+ T+AA+ N L IHRNTL YRL +I Sbjct: 274 ---VTRELEEILKLLKERDVDGVLKETIAAYVEDNDNYAQICDKLHIHRNTLNYRLAKIE 330 Query: 360 ELTGLDLGNFDDRLLLYVAL 379 EL + D ++LY+A+ Sbjct: 331 ELLNRNPRRAKDLMMLYIAV 350 >UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I7_ABIDE Length = 366 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 91/379 (24%), Positives = 186/379 (49%), Gaps = 32/379 (8%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A +IV + + +IN ++ +G I S D+ R+G+ HE + G+ ++++ + Sbjct: 9 LADEIVLAVKDVCNHDINFINPKGIIFASTDKNRVGDYHEIGKQAAATGKTIEVEPS--D 66 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 + G + G+N+P GE++ VIG++G P+ +RK+ L + ++L ++ L + Sbjct: 67 NFSGSKPGVNIPFIFHGEVIAVIGISGIPDEVRKFAYLAQRISGIILRENELERIEQIQK 126 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM--AELQQ 187 +L+ +I E E+ + + L + ++ VE ++ + +D+ + Sbjct: 127 TQLNQLIRAIIHKEHIN---QEYLESI---LKKEKISDCVEYNTIVVKIDTKYNPENISL 180 Query: 188 LQNALTT--PERNNLVAIVSLT-EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++NA+ + + + + I +L+ E V+L ++ K L TR+ + Sbjct: 181 IENAVYSCFEQTGSRLFISNLSNEFVILLESIKI----------KNYIGLFTRLANRYEP 230 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +V +GN + I + YR+ K + M + Y DL L +LL ++ + + Sbjct: 231 IVKVGIGNSY----PILKQYRSYKNARLAINCMMGDETLAIYDDLNLEILLGNISEEAGS 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R L+ L D R L +F N+ TS+ L+IH+NTL+Y+L++I+ LTG Sbjct: 287 LFVKRNLSALDEED-----RSLLKIYFGSNMSLKETSEKLYIHKNTLQYKLDKIARLTGC 341 Query: 365 DLGNFDDRLLLYVALQLDE 383 + F + +LY+AL+L++ Sbjct: 342 NPRIFTEANVLYMALKLEQ 360 >UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostridium RepID=A6M1V5_CLOB8 Length = 342 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/369 (29%), Positives = 171/369 (46%), Gaps = 47/369 (12%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +AQ IV M +I NINVMD G IIGSGD +RIG LHEGA + ++ ++ + Sbjct: 3 LSKTIAQKIVLEMMNVIPYNINVMDESGIIIGSGDSKRIGNLHEGARKAIDNQQINEVFE 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 R ++ G+N P+ + +++GVIG+TG P+ +R++ +LV +TA +++EQS+ + Sbjct: 63 EDDR----MKPGVNEPIIINDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQSKADEEI 118 Query: 126 AQDSRLR-----EELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Q+ RL EL + +EN + A+ GIDL + V +V+ G + S Sbjct: 119 -QNKRLSMQKFYNELAHRKTKYDEN---FHQRAKSYGIDLTKKCRVILVD---GNINSRS 171 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 Q+ + E +N +A V K N L+ +K Sbjct: 172 FKILYQKYS---SYSEVDNRIAF-----FVTSKDLYNG---------------LLENLKT 208 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 ++ R+S+G A S +A+ M G + S Y Y +L + L Sbjct: 209 NKDVK-RISIG---AMEDVAAISLESAELAMEFGAKIKSSSLVYSYDELRFFI---KLSH 261 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D + L ++ L N L +T+ A+ N + L IHRNTL YRL +I + Sbjct: 262 DNKL-PLISMMSNLDKAGNKLELIQTIQAYIEENGDIGNVANRLNIHRNTLNYRLEKIKK 320 Query: 361 LTGLDLGNF 369 LTG + N Sbjct: 321 LTGKNPKNL 329 >UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LH0_SYMTH Length = 405 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/384 (27%), Positives = 173/384 (45%), Gaps = 25/384 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 + +++AQ I R + I+ N+N+MD G I+ SGD RIG H+ A V+ R +DI Sbjct: 28 ITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTNRRLDIYP 87 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL---- 121 GVR G+NLP++++G VGV+G+TG P+ + +GEL+ + L Q R Sbjct: 88 GDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRAEELE 147 Query: 122 -MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + L+A++S LR L E + + A + + V + + G G+ Sbjct: 148 RVRLMARESFLRTLLTSKGPIGER----MVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSR 203 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AE + L L +R T+ + N G A D + + ++ Sbjct: 204 IWAESEWLAQRL---QRGG-------TDRITFAGPWNGLGVVIATDPPRDLSAVLLEALP 253 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 G F V+ G G + RSY TA + G+ Y+ + +L Sbjct: 254 KG---FAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRLLTTLPPS 310 Query: 301 DWQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + A +A L L D+ LLR T+ A+ + + L IHR+TL +RL I Sbjct: 311 E-VAEFVAGMLGGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAI 369 Query: 359 SELTGLDLGNFDDRLLLYVALQLD 382 +E +G D +++ L LY+A+QL+ Sbjct: 370 AERSGTDPRSWEGLLSLYLAIQLE 393 >UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacillus reuteri RepID=C2EWT0_LACRE Length = 352 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 45/379 (11%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV M I NIN+M+ +G II SG++ RI LH GA+ + Q + + ++ Sbjct: 3 LKPELAQSIVDHMMTQIPYNINIMNKKGYIIASGNKSRINTLHVGAVDAIKQRKTLPMEQ 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 H + G+N+PL+ + EI+GV+G+TG+P + L+ E++L+Q + Sbjct: 63 QYGNH---GQPGVNMPLKFKNEIIGVVGITGDPNKVTPLASLLKTAVELLLQQKQENEQE 119 Query: 126 AQDSRLREELVMNLI-----QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + ++++ + I Q + L E A RL I+L + R+V Sbjct: 120 HEIEKVKQRFIYRWINVSKYQNPQLDSELVEEANRLNINLAKQRLVI------------- 166 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 A+A Q+ L + + ++ + E+++L K E I + E Sbjct: 167 AIAGSSQIIKNLKLDQETIIFSLTNHIELIILSS--------------KHQETYIQQKLE 212 Query: 241 YGQLRFRVSLGNYFTGPGSIA-RSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + ++ + +S N+ G +A ++ T + + + GK P R Y Q + +LDS Sbjct: 213 HQEIEYGIS--NWGNLLGRLAEQAVTTLRLSNIFGK---PSFRHY-SQVSFIKQVLDSDL 266 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 N+ L LK D L+ T+ + + N+ T+ LF+HRNTL RL RI Sbjct: 267 NLIAVNDQYEAL--LKRKDGKELI-DTIREFIKCNMSVNQTAHNLFVHRNTLNNRLLRIK 323 Query: 360 ELTGLDLGNFDDRLLLYVA 378 +L LD N +D L++ Sbjct: 324 KLFELDPKNTEDLFQLFIG 342 >UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SH42_RHOSR Length = 386 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 14/383 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +AQ I +I N+ + DA G ++GSGD RIG+ HE ++ V+ R++ Sbjct: 2 LSEALAQQIANEITDVIGFNVLITDAAGTVVGSGDERRIGQFHEASIEVIRARRMIAHSA 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A R L G G+ +PL ++G++VG IGL+G PE + ++G +V E++++++ + Sbjct: 62 ADVRDLVGSLPGVTIPLVIDGDVVGTIGLSGSPEQVEQFGLVVKRQTEILMQEASRIGTR 121 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQR---LGIDLNQPRVVAIVEVDSGQ-----LG 177 R EEL+ ++ +T + +R LG DL PRV+ ++ DS G Sbjct: 122 LTYERAAEELLRDICDWHRSTFTEAQIVRRATGLGYDLRLPRVMVLISYDSHSDDVAVQG 181 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + L+ +Q+A + +LVA ++ + V DA R + ++ Sbjct: 182 QPVSHRVLRAVQDAFDSA--TDLVAPLARQVVAVTTVVTARTPAADAA-LTDRCRKYVSL 238 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 ++E G RV +G+ G + S + A + +G P + Y L + Sbjct: 239 VRERG-WDTRVGIGSIAHGVEQLNLSSQDAYDALRLGAVLDPRGQVYDIDRFRLHQAVSV 297 Query: 298 LRGDWQANELARP-LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + + L+R L L T ++ L+ TL AW ++ L +HRNTL RL+ Sbjct: 298 IPAETR-DRLSRAVLGALATDNDWPHLQETLIAWGECGFNSSRAAQRLHVHRNTLANRLD 356 Query: 357 RISELTGLDLGNFDDRLLLYVAL 379 +I+ L G L + LY+A Sbjct: 357 KIARLLGRPLDEPGLGMTLYLAC 379 >UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HVI8_LYSSC Length = 359 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 55/393 (13%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L K+A +IV +TM + NINV+ G I+ SGD+ R+ ++HEGA+ V + + I++ Sbjct: 2 LTKKLADEIVHQTMLRLRHNINVISPTGVILASGDKMRVEDIHEGAVYVAQTKKTLIINE 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + GIN+P+ + E+VGVIG+TG+ E + + LV +T E+M Q+ + Sbjct: 62 DNIELYPNTKPGINMPILYQDEVVGVIGITGDSEEMLEIANLVQLTTEIMTHQALVESKS 121 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL--------- 176 + + + L+ + L + Q+L L P V +V + Sbjct: 122 EWQRKNNDYIFEALVHGSKLDATLNKRIQKLPFSLIAPFQVILVSLHETSYLENRMPFFF 181 Query: 177 -------GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 + + ++LQ+ LT + N +I+ AL RK Sbjct: 182 EDLFYRQPILAGHSQLQEYYILLTYRQEQNYQSIIK---------AL-----------RK 221 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 + ++L + ++ +G + SY+ A+T + + F++D Sbjct: 222 KKQKLPS---------LQIGIGPVVQQLSQLPYSYQGARTALEFA---TIHNEITFFED- 268 Query: 290 MLPVLLDSLRGDWQANELARPLAR-LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 V L SL ++ E+ R LK ++ L TL ++F N+Q ++ L IHR Sbjct: 269 ---VELFSLFKHRESEEVQAFHHRILKNINAKQL--ETLQSFFDCNLQLKLCAQQLNIHR 323 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +TL YRLN+I ELTG D F+D ++L +A L Sbjct: 324 HTLTYRLNKIRELTGYDPQYFEDAVILQMACTL 356 >UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCK1_FUSMR Length = 361 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/400 (23%), Positives = 182/400 (45%), Gaps = 60/400 (15%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++AQ IV +IID ++N +D+ G II S D RIG H G V+ + ++ I+ Sbjct: 2 EISKELAQSIVVEMKKIIDKDLNFIDSNGIIIASTDETRIGTYHAGGKQVILRKDIIKIN 61 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH- 123 G R+GINLPL GE++GVIG++GE + KYG+++ +E++++++ ++ Sbjct: 62 RD--EEYIGSRKGINLPLNFNGELIGVIGISGETNEVEKYGQIIKRMSEILIKEAWILKR 119 Query: 124 --------------LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV 169 LL Q+S L ++ + L E ++ + +++ I Sbjct: 120 NEEESEKERIFLETLLFQNSFLYNPIIF--------SETLEEIEKKKNGVIIVGKIIKIY 171 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 +++S + D ++++ N + +N ++ + D K Sbjct: 172 DLESIKKIYDPIRIKVKKY-NGYSMLNQNTIIIL----------------------DFHK 208 Query: 230 RVEQLITRMKEYGQLRF-RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 E++I + E+ + F +G G + SY+ + G + E FY D Sbjct: 209 DREKIIELLSEFNKKEFLSFGVGKIKEKIGELKDSYKEGVEALEWGIKSKNE--ITFYDD 266 Query: 289 LMLPVLLDSLRGDWQANELARPLAR--LKTMDNNGL--LRRTLAAWFRHNVQPLATSKAL 344 L L +++ ++ + LA+ K + N + + + ++N +K L Sbjct: 267 LDLELIIKNITKN-----LAQIYKEKIFKKLTNKEIEEYKIIFLLYEKYNGSLNKIAKEL 321 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 FIH NTL+Y+LN++ E T L++ N++D L +A L E Sbjct: 322 FIHVNTLQYKLNKLYEKTDLNMRNYNDFTKLKIAFMLKVE 361 >UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HJH4_PEPMA Length = 360 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 90/376 (23%), Positives = 176/376 (46%), Gaps = 27/376 (7%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARH 70 A+ IV + +ID ++N D G II S + RIG HE A + Q + + +D+ + Sbjct: 8 AKMIVEKLKDVIDYDLNFFDQEGYIIYSTNSNRIGTYHEAAKECVKQNKTIFVDNE--KE 65 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 G ++GIN+P+ ++GEI+ VIG+TG + + KYG ++ E+++++ L + ++ Sbjct: 66 YVGAKKGINIPVTIDGEIIAVIGITGNKDEVMKYGNIIKKMTEILVKEQ-----LVEKNK 120 Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 L+++ MN E L ++ ++ + V + + + + + + L+N Sbjct: 121 LKKK-DMNKYLFESLINELDDYGLYRYLESEDEKYVIVGKNSESRFLLKDSDQIYKILEN 179 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 L+ NN V V E+V+L + + + + R + + + RV Sbjct: 180 NLS----NNFVYSVFYGEIVILAN--------NVDKIIIKKKLDKIRNQIHDAIDSRVYF 227 Query: 251 GNYFTGPGSIARSYRTAKTTMVVG---KQRMPESRCYF-YQDLMLPVLLDSLRGDWQANE 306 G +G + ++ +V + C Y L L +LL S++ D Sbjct: 228 G--ISGSFKMINQFKKNYDNCMVALDWLDNLQRKDCVVDYSTLDLGILLGSIKKDRIKKF 285 Query: 307 LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L + D N + + + + +N ++ LF+H+NT++YRLN++ ++TGLD Sbjct: 286 KEVVLKDISDEDYN-IYKDLIKIYATNNQSITKCAEDLFVHKNTVQYRLNKLRDITGLDP 344 Query: 367 GNFDDRLLLYVALQLD 382 N +D + LY+A L+ Sbjct: 345 RNVEDFIRLYLAFILN 360 >UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35A60 Length = 379 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 29/369 (7%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A+ IV I+ N+N+MD GRII S +R+G H GA ++ + ++ + + Sbjct: 7 VAKTIVNEISNTINKNVNLMDETGRIIASTASDRVGTFHRGAQKIVEE-KLDCLTIYTDQ 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 G R GIN+P+ +G IVGVIG+TGE + + +Y +L+ E++L +S L + D Sbjct: 66 EYSGSRMGINMPIYFQGGIVGVIGITGEWDQISQYVQLIRKATEILLMESYLKNRELHDE 125 Query: 130 RLREELVMNLIQAE-ENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLG---------V 178 R E V L+ E + P ++ +GID R V G G + Sbjct: 126 ASRREYVYKLLFEEFDRIPEQFYQYGFSIGIDAVLARACLTVSFKDGSRGERPKQIYEYL 185 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 D A ++ + Q E ++ LT++ + P G+ D+E+ ++ E + R+ Sbjct: 186 DMAEKKVHEYQ-----AEAKQILVYRELTQLSIFIP-----GK-DSEEVKRTAEDIRKRI 234 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF--YQDLMLPVLLD 296 + + L I Y A +++V M + + Y L L + +D Sbjct: 235 TLPEGIEIKAGLDESLYSGADIRSGYTKACKSLLVA---MASNDRWLVCYNQLTLGLFVD 291 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + R A + + + L ++R T+ LFIH+NTL+Y+L Sbjct: 292 EVSRATREEYVKRIFAFISDEEIAKWV-SLLEVFYRCEGSITETASELFIHKNTLQYQLK 350 Query: 357 RISELTGLD 365 +++ +TG D Sbjct: 351 KLASITGYD 359 >UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5T1_9BACT Length = 449 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 106/409 (25%), Positives = 181/409 (44%), Gaps = 30/409 (7%) Query: 1 MAGWHLDTK-----MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVL 55 +A W +++ AQ+I T I+ ++ + D +G IIG+ ER+G HE + V+ Sbjct: 37 VASWKSESEKVLSGCAQEIARSTAGIVGYDVIITDMKGIIIGASRAERLGCHHEASDEVI 96 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPL-RLEGEIVGVIGLTGEPENLRKYGELVCMTAEM 114 G VA + G G+ P+ L G +VG + +TGEPE ++ + +V E+ Sbjct: 97 RTGHSSATSAEVAATMSGTLPGVTHPIASLNGTVVGTMAITGEPEAVQPFALIVRKQIEI 156 Query: 115 ML-EQSRLMHLLAQDSRLRE--ELVMNLIQAEENTPALTEWAQRLGIDLN------QPRV 165 +L EQ R + ++S L++ + +++ + + + AL A GID + Sbjct: 157 LLREQERFALTVNRESSLQDLVQEMVSFAKGDGDEEALAARAGSYGIDARWYYLPLSAEL 216 Query: 166 VAIVEVDSGQLGVDSAMAE----------LQQLQNALTTPERNNLVAIVSLTEMVVLKPA 215 + + +G G+ +AE L +++ A +R L V P Sbjct: 217 YQLGRIAAGATGMGREVAEQEIYRLKADVLVEIRAAFG--DRRALCTGTVAGRFAVFWPL 274 Query: 216 LNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK 275 + E+ R QL+ R+ G + + GN G ++A+SYR A + +GK Sbjct: 275 GSEPDEEAIEEAVNRGRQLVDRLGSRGH-KIAIGFGNPARGIRAVAQSYRDAGRALAMGK 333 Query: 276 QRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL-ARLKTMDNNGLLRRTLAAWFRHN 334 + Y + + LL SL + A P+ + L+ + L+ T+ W Sbjct: 334 KLRRGPGVYRINEFRIEELL-SLVDRRNRSRFAAPITSPLRAQSDWEDLKNTVRVWCDSG 392 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + SK L +HRNTL YR +I LTG +F L LY+AL +DE Sbjct: 393 FSLVDASKRLAVHRNTLLYRQEKIERLTGRKTRDFRAMLELYLALVIDE 441 >UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJ64_CLOPH Length = 386 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 53/401 (13%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A +IV +I IN+M+ +G II S D+ RIG HEGA+ ++ + +V ++ Sbjct: 3 LSVQIASNIVREVNSVIPLKINIMNEKGIIIASSDQPRIGRFHEGAMHII-ENQVDEVTV 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 +G QGIN PL+L+G I+GV+G+TG+ E + ++ E++LE + Sbjct: 62 HYDGEFNGALQGINYPLKLQGYIIGVLGITGKYEEIASSALIIKRMTELLLENT----YS 117 Query: 126 AQDSRLREELVMNLI------QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 + +L+E + + +A+ T + LG D+ PR + + G + Sbjct: 118 VEQRQLKENVYTRYLSEWLNGEAKNITTDFVRRGKVLGFDITIPRRILVCSFYHSNQGEN 177 Query: 180 -SAMAELQQ----LQNALTTPERNNL---------VAIVSLTEMVVLKPALNSFGRWDAE 225 +M +++ L+ + + + NL A+ S T+M V+ A Sbjct: 178 LQSMQVIEEAEKYLKKRVASKDSLNLYYKAGSTLVCAVTSTTDMSVVSL---------AN 228 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 + +K+VE+ + G S+ N+ ++ R+ + K M K+ + Sbjct: 229 ELKKQVEEKFSVRLVIG---IDSSVENFAFAQTALIRAQKANKACMRTQKRDIQ-----L 280 Query: 286 YQDLMLPVLLDSLRGDWQANELARP--LARLKTMDNNGLLRRT---LAAWFRHNVQPLAT 340 Y DL + V D + +EL++ + R+ NN +R + L ++ Sbjct: 281 YDDLNMEVFTDEI------SELSKQEFVHRIFKGFNNEEIRNSMVLLETFYDMEGSIQKV 334 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 S+ LFIH+NTL+ +L RI+E TG D + L Y+A+ Sbjct: 335 SEHLFIHKNTLQNKLKRIAERTGYDPRSIRHSSLFYIAIYF 375 >UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDQ9_THET1 Length = 388 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/402 (25%), Positives = 185/402 (46%), Gaps = 59/402 (14%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 ++A +V + ++D + V D RG +I S DR +G+ ++D + + Sbjct: 10 EVANTVVKKIGSLLDQQVIVADDRGWVIASTDRRFMGK---------------NLDTSPS 54 Query: 69 RH-LHGVRQGINLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 R LH +R +P+++ + ++ + + +P + E + EM++ Q L+ L Sbjct: 55 RRMLHQLR----VPIKIRDKCGQLMIIESNKPSVPPRMAEAL---VEMVINQIMLVESLP 107 Query: 127 QDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 S L+ +L+ +L+ + ++ AQ LG+DLN PR V +++ LG D Sbjct: 108 NQSDLKNKLIYDLLHGNSSDETSIIRQAQILGMDLNLPRAVLLIDASKYILGGDD----- 162 Query: 186 QQLQNALTTPER----------NNLVAIVSLTEMVVLKPALN---------------SFG 220 +QLQ + T R + + + E+VVLK + + S Sbjct: 163 RQLQQKVNTIIRSIVDFFMLPSDTICGYIGEGEVVVLKASSSRDLANWLRPKEKLDTSPS 222 Query: 221 RWDAEDHRKRVEQ-LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP 279 W KR L+++++ + + +G Y G + SY+ A+ + +G + Sbjct: 223 SWANLAALKRAANALLSKLRSETKQPITIGIGRYHPGILGLTASYQDARAALSLGLKFYG 282 Query: 280 ESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLA 339 ++ + L +P + + + N+LA L LK ++ L +TL +F N P + Sbjct: 283 PNKVHCLDSLGIPAFV-GISDERTKNDLATHL--LKPLEKYPELMQTLEVFFDENCCPTS 339 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 SK L IHRNTL YRL++I+ LTGLD +FD + L +AL L Sbjct: 340 ASKKLCIHRNTLTYRLDKIASLTGLDPRDFDSAVQLRLALTL 381 >UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Enterococcus faecium RepID=C2HBS0_ENTFC Length = 366 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 106/389 (27%), Positives = 185/389 (47%), Gaps = 41/389 (10%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 + ++A++IV ++ IN +D G II S D ERI LHEGA +VL + V I + Sbjct: 3 ISKQLARNIVKNLKDVLKQEINFIDTEGIIIASTDEERIRTLHEGAKIVLDTKKEVFISE 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 G ++GIN P+ E I+G+IGLTG E ++KY E++ E++++++ L Sbjct: 63 D--GQFKGTKRGINAPVYFEQHIIGIIGLTGGKE-VKKYAEILKKMTEILIKEAYLKDFT 119 Query: 126 AQDSRLREELVMNLI---QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 Q R R L + + + ++P L E +D + P V + ++ Q + Sbjct: 120 FQ-LRERHRLTIESLLFPFSHFDSPHLIE------LDFSSPYYVVVGQLPDNQELYQEQI 172 Query: 183 AELQQL--------QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 L +L AL T R ++ +V+ +L L+ ++ Sbjct: 173 TPLLELLERVFSYYSQALFTVHRQQIIILVNRISRALLISLLD---------------KV 217 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM--VVGKQRMPESRCYFYQDLMLP 292 T + QL+ +G+ +S+ A+ + Q + E R F++DL L Sbjct: 218 QTNFDKSYQLQLNFGIGSLCYTEQETPQSFLHAQHACEWITFHQSVNEIR--FFEDLDLG 275 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 +LL ++ ++ + R L L T + L ++TL + ++N ++ LFIH+NTL+ Sbjct: 276 ILLPAIPSGQRSLYVNRILKSL-TEEEVHLFKKTLTCFSKNNGSIKKCAEELFIHKNTLQ 334 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQL 381 YRLN++ LTG + N+DD L+L +A L Sbjct: 335 YRLNKLHSLTGYNPRNYDDYLILKLAFLL 363 >UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2QB04_9BIFI Length = 413 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 114/415 (27%), Positives = 190/415 (45%), Gaps = 57/415 (13%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 +D +A DIV + IN + G II S D RIG H+GA L ++ + V +DD Sbjct: 8 IDPNIATDIVTHLKDALRHEINFFNTSGIIIASTDPTRIGSGHDGARLAIASKQTVCVDD 67 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 G R GIN+P++ +GE V VIG+TGE + + +G ++ E+++ + + L Sbjct: 68 E--HRFAGARNGINVPVQFDGEPVAVIGITGERDEVEPFGTVLQKMTEILIREH--LDQL 123 Query: 126 AQDSR--LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQL-----G 177 A+ +R +R+ L+ L N A LGIDL+ P ++A + VD L Sbjct: 124 ARFNRRTMRDSLITALAYGSGNVADNERLAAMLGIDLDLPCMIASIRGVDPHDLLTYQER 183 Query: 178 VDSAMAELQQLQN-----ALTTPERNNLVAIVSLTEMV-----VLKPALNSF-------- 219 + SA+ +Q++ A TP+ LV + S E + ++SF Sbjct: 184 IVSALD--RQVEGRPDVLATLTPQECLLVIVGSDDETAESTIRAAESLISSFTGHATHCG 241 Query: 220 --GRWDA-EDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV---- 272 GR D R+ +Q + LR+ ++ + P S R + +T + Sbjct: 242 VGGRASTMHDCRRSYDQAV------AALRWGIT-AHASPRPASDERDNASPRTRIASTEL 294 Query: 273 --VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD-NNGLLRR---T 326 + S Y+DL L +++ + E A+ L RL ++G++ T Sbjct: 295 QHCDDENTSLSTFTRYEDLDLGLIVPVI-----PPEQAQALTRLVFGGLDDGVIDAYEIT 349 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 A+ RHN A +K LF+H+NT++ LNRI+ +TG + N +D +L +A L Sbjct: 350 FDAYTRHNGSISAAAKELFLHKNTMQNHLNRIAAITGYNPRNLNDHTILALAFLL 404 >UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D2_9BACT Length = 385 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 109/392 (27%), Positives = 174/392 (44%), Gaps = 50/392 (12%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR---VVDIDDAV 67 A IV II ++N+MD RG II S D ER+G H GA +L QG VV D Sbjct: 8 AMRIVTEMSSIIGHDVNMMDERGVIIASTDPERLGAFHGGARELLRQGLGELVVTCDG-- 65 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS---RLMHL 124 G RQGINLP+ EG GVIG+TG E +++Y +++ E++L S R L Sbjct: 66 --EYPGARQGINLPVCFEGATAGVIGITGRGEEVQQYSQIIKKMTEILLLDSWGERQKQL 123 Query: 125 -LAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA- 181 A S+ EE L AEE T E LGIDL +P + +V ++ D Sbjct: 124 RAAMWSQFMEEW---LFSAEELITDRFVERGLELGIDLRKPFQIFVVALEGSAATADEQE 180 Query: 182 -MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + +++ A+ + + + + PA +++ ++ R+ E Sbjct: 181 RLGRVEEQIRAVVRASADGFYYKLPFRYVCFVSPA-----------SEEKLREMAGRIGE 229 Query: 241 -YGQLRFRVSLG------NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 + FR +G + G+ R+ + + + G+ C FY + L + Sbjct: 230 NVARCGFRSFIGIDAEPVDCRHVRGACDRAGKALRAAVRNGEC------CAFYDGVDLEI 283 Query: 294 LLDSL----RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRN 349 L + R D+ A+ L + G + L+ +F N A +KAL +H+N Sbjct: 284 LAGEVPLKARQDFIAH-----LFHGCSERGRGEIMDFLSVYFHGNGSIQAVAKALCLHKN 338 Query: 350 TLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++YRL RI +LT LD + + + +AL + Sbjct: 339 TVQYRLRRIHKLTRLDPRDLRNAAVFEIALAI 370 >UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMV9_9BACT Length = 391 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/388 (25%), Positives = 181/388 (46%), Gaps = 23/388 (5%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDIDDAVA 68 +AQ++ +I ++ + D +G IIG D +R G L+E + + GR + V+ Sbjct: 5 IAQELAKSISEVIGYDVLITDVKGVIIGCSDPDRGFGTLNESSRIAAETGRGSVDTEEVS 64 Query: 69 RHLHGVRQGINLPL-RLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 L G R G+ P+ +G ++G + +TG+PE + + +V AE+ L + + + + Sbjct: 65 HRLKGTRPGVTYPMVGPDGRVIGTVAITGDPEKVTPFALVVKRQAELYLRERIMQREVME 124 Query: 128 DSRLREELVMN--LIQAEENTPALT-EWAQRLGIDLNQPRVVAIVEV----DSGQLGV-- 178 R + LV + L+ ++ + P L A+ G D + V VE DS GV Sbjct: 125 RERNLQALVSDVFLLNSKVSDPELLLNRAEHFGYDRSSEYVALSVETVRLRDSAGAGVYR 184 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL---I 235 D +A +L++A+ P +L+A + + VV P G D +R+ ++ + Sbjct: 185 DPVLA---RLRDAMGGP--RSLMAAMKMDLYVVFLPLSGKLG----ADLSERIGEIWNGV 235 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 + + V +G+ G +ARS + A+ + +G++ P R Y + + LL Sbjct: 236 RKSLSSMGIEAAVGIGSGAMGIEELARSCKEARLALRIGRKVAPGVRFYPIKGYRVEELL 295 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 + R L+ L+ + LR TL AW S++L +HR+T+ YRL Sbjct: 296 FFSPRSLTESMSERELSPLEGRGDTEELRDTLTAWCESGFNVAEASRSLHLHRSTVNYRL 355 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLDE 383 +++ + +D+ +F + LY A+ LD+ Sbjct: 356 EKLASIFHVDVRDFREMSRLYWAISLDK 383 >UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKW2_9BACI Length = 384 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 35/381 (9%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 ++A I+ + ++ N+N+MD +G II S D +R+ +HEGA+ V + + I+ + Sbjct: 6 ELAFPIIQKLTNTMNYNMNIMDDQGMIIASSDPKRVDSIHEGAIEVQRSKKPLIIETKES 65 Query: 69 RHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 G ++G+NLP+ EI+G +G+TG+P+ + + ++ +T E+ML+Q+ L + Sbjct: 66 SRFVGAKEGVNLPIEFMNEIIGTVGITGKPDQVMELVQMTKITVELMLQQAYLQQQSHFE 125 Query: 129 SRLREELVMNLIQAEE-NTPALTEWAQR-LGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 + +M LI + + L AQ L ID ++ V ++E+ SA+ L Sbjct: 126 QQQLHSWIMELINPDTFDEKKLANHAQHFLKIDFDRAYAVILMEI--------SALNALD 177 Query: 187 QLQNALTTPERNNLV-AIVSLTEMVVLKPALNSFGR-------WDAEDHRKRVEQLITR- 237 L++ + +RN L I +M + + A + + ++ +V QLI + Sbjct: 178 PLKDLI---KRNELWDEINKDIKMYLTESAFMDLTKEGLIIICVEIPPYKSQV-QLIEKF 233 Query: 238 ----MKEYGQL--RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 MK+ +L R++ G I +SY A+ ++ + K+ M + D + Sbjct: 234 FNSIMKKNKKLYAETRIAAGGRHRLVSGIRKSYFEARQSLSLMKKFMDKKNISHIDDWGI 293 Query: 292 PVLLDSLRGDWQANELAR-PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 LLD + ++ + + + +L T L TL F + T+K L IHRNT Sbjct: 294 IKLLDQVPVSFRKGFIEQYDIEKLPTE-----LLYTLQTLFNCDHNLTLTAKTLHIHRNT 348 Query: 351 LEYRLNRISELTGLDLGNFDD 371 L YRL I ++ L+ + +D Sbjct: 349 LAYRLESIQQIMKLNPKSLND 369 >UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales RepID=C5EEN5_9FIRM Length = 385 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 110/401 (27%), Positives = 175/401 (43%), Gaps = 55/401 (13%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG--- 58 +G L + AQ IV ++ NIN+MD RG +I S D RIG LHEGA ++ + Sbjct: 3 SGLKLSRQGAQSIVEEVGAVVGQNINMMDRRGYVIASTDETRIGSLHEGARKLIGEHLPE 62 Query: 59 RVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 V+ + A + R G+NLP+ G IVGVIG+TG + YG++V E+++ + Sbjct: 63 LYVETEHATSTS----RPGLNLPITHGGSIVGVIGITGLYGEVVGYGQVVKKMVEILIRE 118 Query: 119 SRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + QD R + V+N L +W +G L QPR I+E LG+ Sbjct: 119 N-----AEQDERRMGQRVLNRF--------LEDWV--IGSGLMQPR---ILEERGFALGI 160 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPA---------LNSFGR---WDAED 226 D AM + +A E + + L E V + A L S GR + Sbjct: 161 DIAMPRRVMVASARELEEYASTASGQKLLEQVEREAASLAGKGSLVLRSGGRQIILVKKC 220 Query: 227 HRKRVEQLITRMKE--YGQLRFRVSLG------NYFTGPGSIARSYRTAKTTMVVGKQRM 278 +++EQL R++ + + R+ +G + G +++R+A + Sbjct: 221 PDRQMEQLAGRIRTAVFKKFNIRMVVGIDGRAEDIHVAYGQANKAWRSAG---------L 271 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPL 338 + Y + L + + L GD E L + + L A+F Sbjct: 272 AKKDILAYDSVTLELFTEDL-GDGVKAEYIHKLFKKCGYEELCQWMGLLEAYFEAEGSLK 330 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 A S+ L +H+NTL YRL R+ ELTG D+ + Y+A+ Sbjct: 331 AASEKLHVHKNTLTYRLKRLEELTGYDVRLVSQSTVFYMAM 371 >UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCS6_9FIRM Length = 381 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 97/374 (25%), Positives = 164/374 (43%), Gaps = 19/374 (5%) Query: 8 TKMAQDIVARTMRII-DTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 + +AQD V T ++ IN+MD +G II S + RIG H+GA + GR V I A Sbjct: 10 SDLAQDFVEATSSLVRGRTINLMDTKGMIIASTEHGRIGNFHQGAKEAIETGRPVRIAKA 69 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 G ++G N+P+ G+++GV+G+ G+ E ++ L+ + +Q + Sbjct: 70 DLPKYKGAKEGYNMPIFQNGQVIGVVGVYGQEEEVQDVANLLRVYVTQSFKQQVIARRQV 129 Query: 127 QDSRLREELV-MNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + LR +L+ + L+ ++ + + + L L P V IV + G+ L Sbjct: 130 MEGELRSQLLDLYLLGNPDSQENIEQLSDVLSCHLCFP-VTVIVLKTTAPSGISGIYDIL 188 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +Q RN++ + + +L + SF DH + + + R G+ Sbjct: 189 RQYFGNDEVFSRNDIYG--AKDNIFIL---IRSFTGSKRPDHFEDIAANLCR----GKKE 239 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVV---GKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 R+ + + G I Y+ AK + + G R+ E+R L L LL G Sbjct: 240 LRMVISDSCANAGEIVEGYKEAKALLSLSGDGIDRLSEARA--KSKLYLGKLLQH-GGSH 296 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +L R L + L +F + ++AL IHRNTL YRLNR+ E+ Sbjct: 297 YIQQLNRTLRNEVSAQQEQTLLENAKTYFLMDGSVSQAAQALQIHRNTLLYRLNRLYEIL 356 Query: 363 GL-DLGNFDDRLLL 375 GL D+ F+ L + Sbjct: 357 GLNDVAPFERELFI 370 >UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP28_9BACT Length = 405 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 102/396 (25%), Positives = 179/396 (45%), Gaps = 27/396 (6%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 +I T +I N+ + D G I+G+ D R+GELHE +L V+++ R + AR L Sbjct: 2 EIARSTSDVIGYNVIITDTDGVIVGASDENRVGELHEASLAVIAERRGSSTSEDEARGLK 61 Query: 73 GVRQGINLPL-RLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 G G+ P+ + G +VG + +TG+ + +R + +V E++L++ A + Sbjct: 62 GTLPGVTYPISSMSGSVVGSMAITGDADKVRPFALIVKKQIEILLKEREFFEHAANREHI 121 Query: 132 REELVMNL---IQAEENTPALTEWAQRLGID---LNQPRVVAIVEVDSGQLGV--DSAMA 183 ++ + +L + N L A D + P V + + L V D Sbjct: 122 LQDFIQDLSTFVPGVSNETILLARASEFRYDRTWIYVPVAVDLYQFGRFALSVRRDYVNR 181 Query: 184 ELQQLQNALTTPERNNLVAI---------VSLTE----MVVL---KPALNSFGRWDAED- 226 E ++ + + +R L+ I +S E VVL +PA + +A Sbjct: 182 EGEKPETVIQGVKRKILLEIRRIFNGPKDISTMESNNRFVVLHGVRPAESYPAPSNAVTV 241 Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 R++ E L+ R+ + G L V +G+ G +A SY+ + + +GK+ M Y Sbjct: 242 TREKTEDLLGRITDEG-LNAAVGIGSPALGIADLAASYKESWRALTLGKKFMQGPGVYCI 300 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 D L ++ ++ + + L L+ + L+ T+ +W + T+K L + Sbjct: 301 DDYRLEEMISTVAPSVRNRFVLSSLRTLREEPDWNELKDTIRSWCESGFSLVNTAKELHL 360 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 HRNT+ YRL++I +G DL NF L LY AL LD Sbjct: 361 HRNTVIYRLDKIKVYSGHDLRNFRTCLNLYTALLLD 396 >UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM58_9FIRM Length = 375 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/385 (24%), Positives = 166/385 (43%), Gaps = 20/385 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR---VV 61 + + + IV +II ++ MD II D +RIG+ HE + +L +G V Sbjct: 2 QISSSLGMSIVTEVKKIIHEDLTFMDKSCHIIACTDEKRIGDFHEASRKMLDEGLKELTV 61 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 DD G R GINL L +EG++VGV+G+TG E + +YG++V E++L +S L Sbjct: 62 PDDDT----YQGTRSGINLTLEIEGQVVGVVGITGNEEEVSRYGQVVKKMTEILLLESYL 117 Query: 122 MHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 ++ R + + +E PAL + GID+ PR A++ + Sbjct: 118 KEEKIRERSARNRFLQEWLMTDELRMNPALVDEGISQGIDVMVPRRAAVLGHTGNPIMSQ 177 Query: 180 SAMAELQQ-LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 + ++ ++ L RN V+ S +VL R D E K + Q+ + Sbjct: 178 EDVERIEHRIRRILKEDMRN--VSGSSGGSFIVLMSE-----RSD-EMAAKLIAQIQADI 229 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 ++ R + + G + Y A + G +S FY ++L + ++ + Sbjct: 230 EKECGYRLIAGVDSRTISGGQLKAGYFRA-IKALNGAAVQGDSGVAFYDSILLEIFINDI 288 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 G E + + + + R L + + ++ L++H+NTL+Y+LNR+ Sbjct: 289 -GQATKEEFIQRVFKGCSEKRMKEAVRILRVLYECDGSINQAAEQLYLHKNTLQYKLNRL 347 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 E TG D Y+A+ E Sbjct: 348 KEKTGYDPRKLSAAPYYYLAIAFYE 372 >UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepID=B5I5X6_9ACTO Length = 421 Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 156/344 (45%), Gaps = 29/344 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +AQ+I + T +I N+ + DA G +IGSGD R+G HE ++ V+ + Sbjct: 2 LSPSLAQEIASDTTAVIGFNVLITDAGGLVIGSGDSSRVGSFHEASVEVVRTQEPATHNA 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM--H 123 + A+ L GVR G+ LPL G+ VG +G+TG P +R++G LV E++L +S ++ Sbjct: 62 SQAQQLRGVRPGVTLPLVANGKAVGTVGITGTPAQVRRFGLLVKRQTEILLRESVMLRSR 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEW------AQRLGIDLNQPRVVAIVEVDSGQLG 177 LLA+ R E+L+ ++ + P + E A LG DL RV +EV + G Sbjct: 122 LLAE--RAAEKLLSDVASYD---PQVVEGDFLLFRAAELGFDLRLRRVAVAIEVRVPEAG 176 Query: 178 V--------DSAMAE---LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED 226 D A+ L+ ++ P+ +++A + + VL+ + D Sbjct: 177 ARRQGAPTRDMALVRSELLRTVREVFADPQ--DIIASTAPGWIGVLRRLPDRRPVTSLLD 234 Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 +R +I L R +G + SY+ A + +G + +S + Sbjct: 235 DCRRTTDVIAAQD---GLVARAGIGEPAASVSGLHDSYQDACDALRLGARVASDSPVHLI 291 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAW 330 DL + L ++ + + R A L+ + +LR T+ AW Sbjct: 292 TDLRVHQALTTVSQPARNRLIERTTASLRGQPDWPVLRDTITAW 335 >UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactobacillus sakei RepID=Q38XR5_LACSS Length = 345 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 93/160 (58%), Gaps = 6/160 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 +D +AQ +VAR R I NINVM+ +G II SG+ R+G+ H GA+ + QG+ +I + Sbjct: 3 MDKVLAQKVVARLHREIPYNINVMNQQGTIIASGEPSRVGQSHPGAIEAI-QGQKTNIIE 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 G +G N+P+ ++ E++GV+G+TG PE L LV +T E++ EQ+ +L Sbjct: 62 Q--DQPDGTLRGFNMPIVVQNEVIGVVGITGAPEKLTYIAPLVKVTTELLTEQALADQVL 119 Query: 126 AQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQ 162 ++ R E + + + ++ TP + A LG+++++ Sbjct: 120 SRAKRRLERFLFDWLAIQDPAALTPDFVQEANALGVNIDE 159 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%) Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L D +E L D+ +L T +FR+N + T+ L IHRNTL YRL + Sbjct: 258 LSADIVVDEYVEKFRVLAQTDSGQVLITTFQKYFRNNGNIVETAHQLHIHRNTLNYRLGQ 317 Query: 358 ISELTGLDLGNFDDRLLLYVAL 379 I + GLD +D+ ++LY A Sbjct: 318 IKDKLGLDPKRYDELVILYTAF 339 >UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA86_9CLOT Length = 352 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 96/387 (24%), Positives = 161/387 (41%), Gaps = 61/387 (15%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ-GRVVDI 63 +L AQ+IV M I+ ++V D G II S +G+ A + Q G++ Sbjct: 4 YLSVAQAQNIVFELMEIVPKGVSVADENGCIIASSSAAFLGKSSRLAKECIEQAGQLQSY 63 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ----- 118 ++ RH G PL VG I +TG+PE +++ + E ++ Q Sbjct: 64 NE---RHYEG--NTTATPLFFRDICVGAIIMTGDPERIKRLTSIAKAVGESVICQPYFNN 118 Query: 119 ----SRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG 174 S +M+ E L L EE T RLGID+ QP +++ Sbjct: 119 PDQTSYVMYF--------EYLTEWLNNTEEYTLPFIRRGVRLGIDVTQPYYTVVLD---- 166 Query: 175 QLGVDSAMAELQQLQNALTTPE----RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 G+ + ++ + ++ L+ P NN ++ L E E ++ Sbjct: 167 --GIWNPVSAQKAVERILSGPNYYLCHNNSCLVLILQE-------------GTDESVLRQ 211 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 V L +K +++G+ T S+ RS+ A+ + GK+ P+ Y Y+D Sbjct: 212 VAALFHDIK--------IAVGSVET---SLNRSFVVAQNALFAGKRLHPQKNIYDYRDYE 260 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L + Q ++ + + L + L +TL + + + LFIHRNT Sbjct: 261 FAYALSKI----QDLKVKKGVLELFEQPQHADLLQTLEMYIQESGNSAEVIHKLFIHRNT 316 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYV 377 L+YRL++I ELTG + +F D LYV Sbjct: 317 LKYRLDKIQELTGKNPRSFQDLFYLYV 343 >UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34F4E Length = 365 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 44/358 (12%) Query: 43 RIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR 102 RIG LHEGA ++ + V ++D +L G + G+N+P+ +EG +GVIG+TG P+ L+ Sbjct: 30 RIGTLHEGAKKLIEKNEV-EMDIYPDDNLSGAKNGVNVPIHIEGRTIGVIGVTGNPQELQ 88 Query: 103 KYGELVCMTAEMML---EQSRLMHLLAQDSRL-REELVMN---LIQAEENTPALTEWAQR 155 ++ A +M +QS LA+ RL EEL++N +I +E + A+ Sbjct: 89 DIAMVIGEMANIMFMNTQQSMKDASLARRRRLFCEELLLNSRLVINSET-----LKRAEE 143 Query: 156 LGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL--QNALTTPERNNLVAIVSLTEMVVLK 213 L + + RV +I G + ++E ++L + LT+ R L V + + + Sbjct: 144 LSLPIQ--RVQSI-----GVFHIPEFISETERLAIDDKLTSLLRTFLGDSVYIHHHHIGQ 196 Query: 214 PALNSFGRWDAEDHR-KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 L F + A+ + +I + Q+ L P I +Y A+ M Sbjct: 197 -NLAVFFHFRAKGSAVAHINAIIRELSMQKQIHIFCGLSCCVKDPSQIHTAYLYAEKAME 255 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGD---------WQANELARPLARLKTMDNNGLL 323 + S+C Y++L L +++ L D W+ A P R + D Sbjct: 256 IASH-AGISQCLIYENLALEIIISQLSPDSIHAFLDNVWKD---AEPGQRNQAAD----- 306 Query: 324 RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 LA +F N ++ L+IH+NT++Y++ +I +LTG D D +L++A +L Sbjct: 307 --FLAVYFDSNGSLDQIAQKLYIHKNTVQYKIKKIIDLTGYDPRLPKDAAVLFLAYKL 362 >UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria RepID=B8HX31_CYAP4 Length = 436 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 108/415 (26%), Positives = 174/415 (41%), Gaps = 77/415 (18%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 K+A+ +V + R++ T + V D G II S +E A L LS RV Sbjct: 35 KVARQVVEQLTRLLQTGVIVTDQAGWIIAS---------YEPAWLGLSLQRV-------R 78 Query: 69 RHLHGVRQGINLPLRLEGEIVGVIGLTG----EPENLRKYGELVCMTAEMMLEQSRLMHL 124 H + I PLR GE G I + EP NLR LV +++L+Q+ ++ Sbjct: 79 SQFHPLNAAI--PLRW-GEDQGTIRIAASTQTEPLNLRLIQRLV----DLILQQTTVLTS 131 Query: 125 LAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG------ 177 L+ + + +L++ N + Q G+DL +PR V +++ + L Sbjct: 132 GTSQHELKHKFIHDLLRGRPLNRLDILRDGQIFGMDLTRPRAVVLIDAANYILATPEFDL 191 Query: 178 -------------VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPA--------- 215 V S++ L N + + A + E+ VLK + Sbjct: 192 ERPTHQIWWRAQRVISSVVSFFHLPN-------DTICAYIGDGEIAVLKASRTQDLAAWA 244 Query: 216 --------LNSFGRWDAEDHRKRV-EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRT 266 LNS W KR L++R++ Q + +G Y +A SY+ Sbjct: 245 SGQDQASLLNS--SWANLSALKRAGNALLSRLRSDTQAAITIGIGRYHPQLEGLAHSYQD 302 Query: 267 AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRT 326 A+ + +GK +++ + L + + L + +LAR L L +D L T Sbjct: 303 ARAALSLGKHFHGQNQVHCLDSLGIAAFI-GLADEATKIDLARHL--LSPLDQETELLET 359 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L +F N P T++ L IHRNTL YRL +++ LTGLD FD + + +AL L Sbjct: 360 LNVFFDQNCCPSTTAQQLSIHRNTLSYRLEKVTLLTGLDPRRFDQAMQIRLALLL 414 >UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoanaerobacter RepID=B0K668_THEPX Length = 350 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/379 (23%), Positives = 177/379 (46%), Gaps = 47/379 (12%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G+ L K+A DI + + + ++D G +I G+++ E G L + +V Sbjct: 1 MIGYDLIKKVAYDI----QKNLQMPLYIIDKSGNLI-YGNKD-FFEKKAGFLEI----KV 50 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ID+ + ++ V + I + + I L + E +K L+ + E +L++ Sbjct: 51 EYIDE---KDIYEVGEFICYNIFYNNVLFFTIALERKDEQSKKVLYLISLIFEQLLQKYN 107 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 REE ++ + + + ++ +A++ I+ N VAIVE ++ +D Sbjct: 108 -----------REEFLIEALTGKLSVNLVSYYAEKYKINKNVKYTVAIVESNNE---IDD 153 Query: 181 AMAELQQL--QNALTTPERNN--LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 A+ + + + L T + ++ V I S G + K ++ +I Sbjct: 154 AIKIITNIFDKGNLYTVKFDDKRFVTIFSYK------------GNNSLIELYKTMKDMIE 201 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 G ++ +++ + F +I +YR A+T +++G++ E Y Y+D P +L Sbjct: 202 SE---GYMKVKIASSSSFVPIENIHIAYREAETALLIGQKLEDEKGIYIYEDYSFPEILW 258 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + N + + + L++ TL A+FR+++ T++ L+IHRNTL YRL+ Sbjct: 259 GIDIEKVNNFIKKRNIDFGIFKDEELIQ-TLNAFFRNSLNLSETARELYIHRNTLVYRLD 317 Query: 357 RISELTGLDLGNFDDRLLL 375 +I ++TGLD NFDD +LL Sbjct: 318 KIFKMTGLDAKNFDDAVLL 336 >UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=Synergistaceae RepID=C9M8C5_9BACT Length = 405 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 99/388 (25%), Positives = 171/388 (44%), Gaps = 20/388 (5%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDIDDAVA 68 +AQ++ R I ++ + D G IIG D R IG L+E V + G+ + A Sbjct: 5 IAQELAETIARTIGYDVVITDLAGIIIGCSDPTRGIGTLNEACAQVAASGQPRWESEEDA 64 Query: 69 RHLHGVRQGINLP-LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 + L G + G+ P L ++ ++ G I LTG PE +R + LV AE+ L++ L + Sbjct: 65 KLLKGTKPGVTYPILGVDRKVAGTIALTGAPELVRPFALLVKTQAELYLKERIAAAELQE 124 Query: 128 DSRLREELVMN--LIQAEENTPALTEW-AQRLGIDLNQPR-VVAIVEV---DSGQL-GVD 179 R + LV + L + N P + E A+ +G + VVA+ E D G G D Sbjct: 125 RERNFQALVSDIALFKQGINDPKIYETRAELMGYTPSSSYCVVALNETSQPDEGSSHGAD 184 Query: 180 SAMAE--LQQLQNALTTPERNNLVAIVSLTEMVVLKPALN----SFGRWDAEDHRKRVEQ 233 + + L +++ P +L S V A+N + R +D +KR E Sbjct: 185 YSAQQRLLSEIRTCFGNP--GDLCGSTSPHRFVAFC-AVNCDDDTSSRSVLDDVKKRCET 241 Query: 234 LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 L+ R+ +L ++ +G ++ SYR A + +G + + Sbjct: 242 LLNRLTA-AKLPCKIGIGGIHRDIDGLSASYREALAALQMGGNADSSEPIHCISGYRIEE 300 Query: 294 LLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 LL Q + R LA L ++ L+ T+AAW + ++ L +HR T++Y Sbjct: 301 LLLKSEMTLQDALVERELAPLFARNDGDELQDTIAAWCESGFSVVRAAELLHVHRTTVDY 360 Query: 354 RLNRISELTGLDLGNFDDRLLLYVALQL 381 RL ++ + ++ +F + LY A+ L Sbjct: 361 RLEKLQRILSVEPRDFREMSRLYWAVVL 388 >UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteria RepID=A6NZ16_9BACE Length = 363 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/382 (23%), Positives = 168/382 (43%), Gaps = 36/382 (9%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG--RVVDI 63 + +++ Q +V + D I V+D+ G ++ + IGE GA+ ++ +V Sbjct: 1 MSSRIFQSVVLQMKESSDRAIGVIDSEGTVVACNELTNIGERWPGAVETVNAAGNEIVTF 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + L G + + + GE + L+C A + L ++ + Sbjct: 61 EGKTFKALTGWGAQFDYAVFVRGE--------------DDHARLICSMAAVALNGAKTYY 106 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV-EVDSGQLGVDSAM 182 D + V N+I + A+ L PR V ++ +V S +G A+ Sbjct: 107 EEKHD---KATFVKNIISDNILLGDIYVRAKELHFVSEVPRAVFLIRQVGSTDVG---AI 160 Query: 183 AELQQLQNALTTPERN-NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 +Q L PE+ + V +S T++ ++K ++ +++D K +Q+ + E Sbjct: 161 DVVQSL-----FPEKQVDFVLSISETDVALIKQLSDT---TESKDLYKVAKQIEDALAEE 212 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 ++ + +G + +AR+Y+ A+ + VGK E Y++L + L+ L Sbjct: 213 LNVKAVIGIGTIVSHIRDLARAYKEAQVAIDVGKVFDTEKSIINYENLGIGRLIYQLPTT 272 Query: 302 WQANELARPLAR--LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 L + + +D L T+ +F +N+ T++ LF+HRNTL YRL +I Sbjct: 273 LCEMFLQEVFKKNPIDALDQETLF--TINKFFENNLNVSETARKLFVHRNTLVYRLEKIK 330 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 +LTGLDL FDD + VAL + Sbjct: 331 KLTGLDLREFDDAITFKVALMV 352 >UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Enterococcus faecalis RepID=C0X821_ENTFA Length = 337 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 4/103 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD A IV + M I NIN+MD RG+II SGD RIGE H GA +++ + ++I Sbjct: 4 LDKIQANKIVEKLMADIPYNINIMDERGKIIASGDSARIGERHRGAERAINERKNIEIYK 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELV 108 + ++G N P+ L I+GV+G++GEP+ +RK+ +LV Sbjct: 64 DTSLE----KKGTNEPIILNDHILGVVGISGEPDEVRKFTKLV 102 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 326 TLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD--RLLLYVALQLDE 383 T+ + HN+ TS+ L IHRNTL YRL RI ELTG+D + D +L Y A E Sbjct: 274 TVIFFANHNLNINETSQVLHIHRNTLNYRLKRIHELTGMDPKVWQDFWKLFYYFAYCFKE 333 >UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=Nocardioides sp. JS614 RepID=A1SC72_NOCSJ Length = 563 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 136/309 (44%), Gaps = 43/309 (13%) Query: 86 GEIVGVIGL------TGEPENLR-KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 +++GV+ L GE E + ++G V + +E +RL L+ + RLR +LV Sbjct: 270 ADVLGVLALIDPAQRAGEQEQIAIEHGATV-----LAMELARLRSLIETELRLRRDLVDE 324 Query: 139 LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV-----DSGQLGVDSAMAELQQLQNALT 193 L+ E + AL E AQ LG DL +P V ++E DSG + A Q L Sbjct: 325 LLSGTEESSAL-ERAQALGHDLEKPHRVVMIEGNGRVHDSGAFFLAVRRAARQMHAGTLL 383 Query: 194 TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 R V ++S ++ D E R V +KE G R R+ +G+Y Sbjct: 384 V-ARGESVVVLSEADL-------------DWEKFRTLV------IKELGGGRCRIGVGDY 423 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR---- 309 GPG +SYR A+ + + E + Y DL + +L + R Sbjct: 424 CQGPGGFPQSYREAQLALRMQGVAKAEDQATVYADLGVYRILAEVENPAAVERFVRLWLS 483 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 PL + L+ TL+ + + AT+ L +HR+TL+YRL RI E++G DL + Sbjct: 484 PLLDYDARKGSDLVH-TLSRYLECGGKYDATAIELSVHRSTLKYRLQRIREISGHDLSDP 542 Query: 370 DDRLLLYVA 378 D L +A Sbjct: 543 DTAFNLQLA 551 >UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0M4_PELTS Length = 390 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 33/333 (9%) Query: 76 QGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREEL 135 +G +PL G ++G I + E ++ ++ EM+L+++ L+ ++S+ +E Sbjct: 51 EGSEIPLEYGGHVIGSIKICREEGQVKGTLDISRSVIEMLLKKAFLVEEQQRESQAKELF 110 Query: 136 VMNLI--QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA-------MAELQ 186 V L+ ++ + P L + LG DL P+VV IVE + + D + ++ Sbjct: 111 VSQLLNQKSSQPNPTLNILGRILGYDLEDPQVVFIVEFEKKESLNDRSPEWNRLRSIAIK 170 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPAL-NSFGR--WDAEDHRKRVEQLITRMKEY-- 241 ++N +V+ S +VVLK L GR ++ K +++ R +++ Sbjct: 171 IIENFFKFSGGFIVVSYFS-GRIVVLKNILYEEAGREAGSCKNGGKEKGEVLLRCRKHLI 229 Query: 242 ---GQLR----------FRVSLGNYFTGPGSIARSYRTAKTTMVVGK--QRMPESRCYFY 286 LR + +G G ++ SY+ A + +GK + + +S Y Sbjct: 230 SLGESLRQAILLGTKHDVSIGIGECHRGVLAVRHSYQEAYLALNMGKYFKEVRQSNIYHI 289 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 D L LL + + + + R L +K L+ TL A+F++N+ ++ F+ Sbjct: 290 SDFALESLLSRICDEEKERFIERYLGSIKDEKE---LQETLEAFFQNNLNIAQAAEKAFL 346 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 HRNT YRL++I LTGL+ +F D L+L +AL Sbjct: 347 HRNTFTYRLDKIQSLTGLNPRSFYDALVLAIAL 379 >UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKQ6_SANKS Length = 360 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 5/151 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +++AQ +V ++ ++NVMD G II S D ER+G LH GA V+++G V + Sbjct: 9 LSSELAQRVVDTVTSRLERHVNVMDEHGVIIASSDPERVGTLHHGAARVVAEGHTVTV-- 66 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 R G+N PL ++G + GV+G+TG+P + + +V + ++++ Q R Sbjct: 67 TTPEPGSSDRPGVNEPLVIDGRLCGVVGVTGDPREVAQLATVVALGVQLLITQERSYDAA 126 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRL 156 + S EL+ L P TE RL Sbjct: 127 TRRSTAARELIAFLTS---GPPDATEVGSRL 154 >UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH14_9FIRM Length = 237 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 35/240 (14%) Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE-LQQLQNALTTPERNNLVAIVSLTEMVV 211 A++L ID+ RV ++E G+ D + E ++QL++ TT + + +A V +V+ Sbjct: 7 AKKLNIDIEATRVAYLIEATYGK---DQNLVETVKQLED--TTDD--DFIAAVDEKSIVL 59 Query: 212 LKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM 271 +K + ++ K E+L+ +K G R+++G G ++RSY+ A+ + Sbjct: 60 VKEVC---VKAQSKQFVKTAEKLLKNLKNVGINDARIAVGTIAKGIKDVSRSYKEAQIAL 116 Query: 272 VVGKQRMPESRCYFYQDL------------MLPVLLDSLRGDWQANELARPLARLKTMDN 319 V K Y L + + + + GD+ E+ D+ Sbjct: 117 EVDKIFYENKEVVAYDQLGIGRLIYQLPLPLCKMFIKEVFGDYSPEEI----------DD 166 Query: 320 NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L T+ +F +N+ TS+ L+IHRNTL YRL++I + T LDL NF+D + +AL Sbjct: 167 ETL--ATIYKFFENNLNVSETSRQLYIHRNTLVYRLDKIQKSTNLDLRNFEDAIAFKIAL 224 >UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD4_ALKMQ Length = 350 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 8/122 (6%) Query: 263 SYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL----ARLKTMD 318 SY+TA+ + +GK +P + Y ++ L +P+++ + QAN+L + +K++ Sbjct: 219 SYKTAENFIEIGKVFLPSHKTYSFKSLTIPLMISKI----QANDLEEIMKQFDCNIKSLF 274 Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 +N L T +F++N+ T++ LF+HRNTL YRL++I ++TG DL F+D +L V Sbjct: 275 SNNELLNTAFIFFKNNLNISDTARDLFVHRNTLIYRLSKIQDITGYDLRIFEDAILFNVM 334 Query: 379 LQ 380 + Sbjct: 335 IN 336 >UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=Clostridium RepID=A3DGK3_CLOTH Length = 361 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 84/377 (22%), Positives = 171/377 (45%), Gaps = 32/377 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVL-SQGRVVDID 64 + K+ Q++V + +ID+ +MD G I+ D +++G+ ++ S+ + V ID Sbjct: 1 MSVKIYQNLVNQIKDVIDSEFGIMDDTGLILACSDEKKVGQSSSLVSEIMRSKDQFVVID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + ++ ++ ++ + + + EN +K+ L+ + + ++ Sbjct: 61 GQTFQKVY-----------IKNKLEFITFIDSDSENSQKFLALISINTINV--KNYFDEK 107 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + S ++ ++ N++ + +T A+ L + N RVV +VE + + D E Sbjct: 108 YDKISFIKGIIMDNILPGD-----ITLRAKELHLQNNVNRVVFLVETEKAK---DIYAHE 159 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + + P +N +V E VVL L +D ++ K + +I + G + Sbjct: 160 IIEG----LFPVKNKDFVVVLDDEKVVLIKELKP--DYDYKEINKISKVIIDTLSTEGMI 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + RV +G I RS++ A+ +++G E Y L + L+ L Sbjct: 214 KARVGIGTVVDNIKDIGRSFKEAQMALLIGGIFDSEKSIVDYNRLGIGRLIYQLPPTLCK 273 Query: 305 NELARPL--ARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L + +D+ + T+ +F +N+ TS+ L++HRNTL YRL++I ++T Sbjct: 274 LFLKEVFKEGSFEALDSETMY--TINKFFENNLNVSETSRQLYVHRNTLVYRLDKIQKIT 331 Query: 363 GLDLGNFDDRLLLYVAL 379 GLDL FDD ++ VA+ Sbjct: 332 GLDLRLFDDAIIFKVAM 348 >UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL12_9FIRM Length = 379 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 87/393 (22%), Positives = 160/393 (40%), Gaps = 48/393 (12%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L + A+ IV ++ IN+M+ G II S D ERI H GA V+ + + ++ Sbjct: 3 LRVQQARAIVHEINTVLPQKINLMNKDGIIIASTDPERIHTFHGGAARVIREN-LDELRI 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 G R G N L++EG +GV+G+TG E++ ++ E+++ + + Sbjct: 62 YRENEYPGTRPGTNFMLQVEGVPIGVLGITGSYESILPIANVIRKMTELLVHEQEYQRMQ 121 Query: 126 AQDSRLREELVMNLIQAEEN--TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 R + L++ E + E A+ L IDL+ PR + + ++DS Sbjct: 122 THLQYQRHLFLQELLEHSETFLSKEQIERARLLDIDLSVPRRIVVADLDSP--------- 172 Query: 184 ELQQLQNALTTPERNNLVA---------------IVSLTEMVVLKPALNSFGRWDAEDHR 228 +PER+N V +S +M+V + E R Sbjct: 173 ---------VSPERHNEVFSQLEMEAQRIDAACRAISTNQMIVFLTDIRP-----QEQLR 218 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGS--IARSYRTAKTTMVVGKQRMPESRCYFY 286 E+L K +G + LG P + + +++ A+ + R Y Sbjct: 219 SFAEKLFVYAKSHG---IGLCLGLDSPAPDNTRLRQAFEQARKAL-YSCHRKGTVHIKGY 274 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 ++ + + D + + + + ++ + TL +F H+ + T+ AL+I Sbjct: 275 DEINMELFADLIPLTAKREYVKKIFHGYTPLELADAV-HTLECFFEHDGSIIRTADALYI 333 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 H+NTL+ L +I+ TG D + + YV L Sbjct: 334 HKNTLQQHLRKIAARTGYDPRSLRSSAVFYVVL 366 >UniRef50_Q48HC7 Sugar diacide regulator n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48HC7_PSE14 Length = 139 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 3/116 (2%) Query: 266 TAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRR 325 A+ + Q +P R + LPVL R DW A ++A P+ RL N+ L Sbjct: 22 AARDLLDYASQALPGQRLLRLEAYRLPVLFWRYRHDWLAEDVAEPIGRLH---NHVQLLD 78 Query: 326 TLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 TL WF ++ + A ++AL IHRN+L YRL +I ELTG D DD L LY+ Q+ Sbjct: 79 TLCKWFEYSGESQACAEALGIHRNSLRYRLEKIGELTGCDPYKTDDLLRLYLGAQM 134 >UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN6_9FIRM Length = 378 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 94/390 (24%), Positives = 175/390 (44%), Gaps = 41/390 (10%) Query: 9 KMAQDIVARTMRIIDTNI-NVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 ++AQ +V +++ I N+MD RG I+ S + RIG HEGA VL R V I Sbjct: 5 ELAQQLVQTASTLLNGRIVNIMDTRGIIVASTEAHRIGTRHEGACQVLRTRRPVAIHREE 64 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 G ++G NLP+ +G+++ V+G+ G P+ +R ++ E Q H L Q Sbjct: 65 LALYPGAKEGYNLPVWNDGQLMAVVGIFGNPDEVRDSAHILAAYTEQFFHQ----HALDQ 120 Query: 128 DSRLREELVMNLIQ------AEENTPALTEWAQRLGIDLNQP------RVVAIVEVDSGQ 175 +R+ EL + ++ + + + L A+ L + L P RV ++ Q Sbjct: 121 RARVAGELRSSYLRMVLSTLSPDASEQLAILAEALNLHLRFPVQVLALRVPSVTSPCDQQ 180 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 +D A+ EL + L P ++ AI+ +++LK A ++ + +++ Sbjct: 181 QLLDRAIEEL--IFRRLVAPS-CDVWAIMD-NRLMLLKSATDTPA--------SPLPRMV 228 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQR-----MPESRCYFYQDLM 290 + +++ ++ +G T I R+ A+ +++ R + ++ C F+ + Sbjct: 229 SALEQALGRPVQLCVGTPCTSVRQIHRA--GAEASLLCDLDRSGVLDIQDASCRFFYLMQ 286 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L +S D +L R K +D +L T A++ + L IH+NT Sbjct: 287 RTALRESDFIDDMLEKLVRQFGD-KELD---VLLTTACAYYHCCGSVNQAATQLHIHKNT 342 Query: 351 LEYRLNRISE-LTGLDLGNFDDRLLLYVAL 379 L+YRL+R+ + L D F+ LL + + Sbjct: 343 LQYRLHRLWDVLCPGDESPFEREYLLRLCI 372 >UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RLU1_9CLOT Length = 382 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 95/367 (25%), Positives = 161/367 (43%), Gaps = 18/367 (4%) Query: 8 TKMAQDIVARTMRIIDT-NINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 + MAQD V T ++ IN+MD G II S ++ERIG H+GA V++ G+ V I+ Sbjct: 5 SSMAQDFVEATSSLVGGRTINIMDREGTIIASTEQERIGTFHQGAAEVIATGKPVLIETK 64 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 G ++G N+P+ L+ E++GV+G+ G E + L+ + Q + Sbjct: 65 DLPRYPGAKEGYNMPIFLKDELIGVVGIFGCEEQMLNVANLLKVYVTQHFAQQAMAQKQN 124 Query: 127 QDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +S +R L+ L+ + + + + + + L P V ++ + + Sbjct: 125 VESEVRNRLLSLLLLGDIGQMETIYQLSALIPVQLAFPVKVIMIRAGKRKNTREQMNHYT 184 Query: 186 QQLQNAL--TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 Q QN + T +R+ V + + +++ A G+ D ED K + Q++ +E G Sbjct: 185 QLFQNMMWQGTLDRSRDVFGIQNNDCIIIHSA-PRHGKAD-EDLDKIIAQVV---REEG- 238 Query: 244 LRFRVS--LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 L VS PG + S +M G R E Q L+ L+ G Sbjct: 239 LCIAVSGACPRLEDIPGGMKES--NTLISMEGGPVRNLEDSQVKIQYLIYKSLIHG--GT 294 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 A L R L + +L T +++ N S+ L +H+NTL YR+ R+ +L Sbjct: 295 KYAEMLYRKLTASQDARQAEVLLVTARVYYQENGSVQKASERLHLHKNTLLYRMKRLFQL 354 Query: 362 TGLDLGN 368 LDL N Sbjct: 355 --LDLEN 359 >UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains C-terminal Fis domain) n=5 Tax=Bacillaceae RepID=B7GMN9_ANOFW Length = 410 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 36/223 (16%) Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV-EQLIT 236 +D + QQL L T + L+ +V+ P+ N +G E H +R +T Sbjct: 207 IDYLLKTTQQLAIPLYTIDHQRLIVLVA--------PSSNVYG----EAHIERFFRSFMT 254 Query: 237 RMKEYGQLRFRV-----SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE--SRCYFYQDL 289 +MKE RFR+ + GN + IA+SY+ A+T + + K+ P + YQ L Sbjct: 255 QMKE----RFRIDITMGAFGNVYECYTKIAKSYKEAQTVLKM-KRAFPHQLANIQSYQHL 309 Query: 290 MLPVLLDSL-----RGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 + D L GD+ L +LK D ++ L T+ + + T+K Sbjct: 310 GMYQFFDLLFEQKRHGDFHN----VALEKLKQYDAQHHTNLVETIETYLDCDSNVNETAK 365 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 L IH NTL YRL RISE+ +DL N +++ LY+ ++LD+ R Sbjct: 366 TLNIHPNTLAYRLKRISEIGNIDLSNMSEKVKLYIDMKLDKYR 408 >UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=Chloroflexaceae RepID=A5UPM6_ROSS1 Length = 525 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 31/283 (10%) Query: 111 TAEMMLEQSRLMHLLAQDSRLREELVMN-LIQAEENTPALTEWAQRLGIDLNQPRV---V 166 + + LE ++ +LA + RLR + V L+ A + L + + LG DL QP V Sbjct: 248 ASALALELAKEQAVLAAEERLRGDFVQAVLVGAATDDKTLVQRGRELGYDLRQPHVALLC 307 Query: 167 AIVEVDSGQLG--VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD- 223 IV+ D + D+ A L L A R + +++ PA++ R+ Sbjct: 308 GIVDGDDRTIARIADALSAALNALGVAAPMMRR--------IDDVLCYIPAVSRGRRFHE 359 Query: 224 -AEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 A+ R+R+ I + V++G + +RS R A+ +++G++ + R Sbjct: 360 VADLLRQRLVNDIPNVL--------VAIGREAPTLTAWSRSLREAEQALLIGRELVGNGR 411 Query: 283 CYFYQDLMLPVLLDSLRGDWQANELARPLARLKTM-----DNNGLLRRTLAAWFRHNVQP 337 + DL + LL LR + E R + L T+ D +G L +TL A+F HN Sbjct: 412 VLDFSDLGVYRLLLLLRESPELWEFYR--STLATLVEYDRDQHGELLKTLEAFFEHNGNL 469 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 T+ AL IHRNTL YRL RI E++G D +DRL L++AL+ Sbjct: 470 ARTADALHIHRNTLLYRLTRIKEISGRDPDVAEDRLALWLALK 512 >UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8N5_RUMGN Length = 372 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 87/395 (22%), Positives = 176/395 (44%), Gaps = 43/395 (10%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVL---SQGRVVD 62 L+ +A+ ++ + + N+N+M+ +G II S + ERIG+ HE A ++ + V + Sbjct: 2 LENSLAEKLIEQVTKYTSYNVNIMNEQGVIIASRNPERIGKFHEVAWQIVHGTTDIMVTE 61 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE-QSRL 121 D+ GV GIN+ + +EG+ GV+G+TG P+ +R ++ M E +++ +++ Sbjct: 62 NDNEYP----GVLSGINMIIEIEGKREGVVGVTGNPDEIRPIALIIKMAIETLIKYENQK 117 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 M + +R ++ + L Q + P + Q+L +LN + + + Sbjct: 118 MQAFRRQTR-KDRFMEMLTQKQYRAP---QDIQKLAAELNYREDLIRIPILCHLQSASDQ 173 Query: 182 MAELQQLQNALTTPERNNLVAIVSLT----EMVVLKP----ALNSFGRWDAEDHRKRVEQ 233 A L ++N R +L +S +++ K L S ++ D+ K Sbjct: 174 EAFLHSIKNG-----REHLTQDISFQMEDRYILIFKTLKGEHLFSDYKFLLADYLKST-- 226 Query: 234 LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAK--TTMVVGKQRMPESRCYFYQDLML 291 + M+E ++ +G + T SY+ K T + G E + +++ D + Sbjct: 227 -LKWMRE-EEICCTFYVGTFQTSFSQYYYSYQHCKWLETHIFG-----EHQAFYFYDFIG 279 Query: 292 PVLLDSL-RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 + + R + Q ++ A+ D + + ++N ++ F+H+NT Sbjct: 280 EYITSCIPRQELQ--QIFNVFAQKLPEDFRKNYIEIVGSLIQNNFNIQNAARQCFMHKNT 337 Query: 351 LEYRLNRISELTGLDLG-NFDDR---LLLYVALQL 381 YR N+I E+ LD + DD + LY+ L+L Sbjct: 338 FTYRYNKIREVLRLDHQRSMDDTWMLICLYLYLKL 372 >UniRef50_A8UB66 Putative uncharacterized protein (Fragment) n=1 Tax=Carnobacterium sp. AT7 RepID=A8UB66_9LACT Length = 313 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 4/113 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L A+ IV++ M I NIN+M+ G II SGD RIG H A + + ++++ Sbjct: 2 LTNSQARLIVSKLMEDIPYNINIMNNLGIIIASGDNNRIGTSHRAAERAIKEKKIIE--- 58 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 V + H ++G N P+ E I+GV+G+TG+P +R + ++V A +++E+ Sbjct: 59 -VYQDTHLEKKGTNEPIIYEDIIIGVVGITGDPNEVRPFTKIVKTVALLLIEE 110 >UniRef50_A9KS82 Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS82_CLOPH Length = 520 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 3/140 (2%) Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANE 306 R+ + N F + Y A + +G + PE Y YQ+ + L + + Sbjct: 361 RIGISNSFACIENFVSHYEQAHAALKLGHKLNPEGLVYHYQNYQIFDLFSEAKNPDKLGR 420 Query: 307 LARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 P LA L+ D N+ L +TL + TS++LFIHRN+L YRLNRI+EL+ Sbjct: 421 FCHPALAVLRQYDHENSSQLYKTLCVFINKGCNIKLTSESLFIHRNSLVYRLNRITELSQ 480 Query: 364 LDLGNFDDRLLLYVALQLDE 383 +DL + + LL ++ +D+ Sbjct: 481 VDLSDINTLFLLRLSFLIDQ 500 >UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmicutes RepID=Q3DF78_STRAG Length = 364 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV + +IN ++ +G I S + +R+GE HE L V G+++++ D Sbjct: 3 LRKQLAQQIVTSIKDVCQQDINFINTKGIIFASTNPKRVGEFHEIGLKVAQTGQMIEVTD 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + G + GIN+P E++ IG++G P + KY L ++L++ L +L Sbjct: 63 QES--YFGTQAGINIPFYYNCELLATIGISGNPNQVGKYALLAQKMTRLILKEHELDYL 119 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 39/54 (72%) Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 L ++F+HN+ S+ LFIH+NT++YRLN+I E T L+ NF D LLY+AL+ Sbjct: 302 LNSYFKHNLSLKECSQELFIHKNTVQYRLNKIYESTQLNPRNFKDATLLYLALK 355 >UniRef50_C0D4S9 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4S9_9CLOT Length = 176 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI- 63 +D K+AQ IV + N+N +D G I S D RIG HE G+ +++ Sbjct: 4 QIDRKLAQQIVDTVKDVCGQNVNFIDGSGLIYASTDAGRIGSYHEIGRQAAVAGKAIEVE 63 Query: 64 -DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 DD G ++G+NLP+ G +V VIG++G P +R Y L +++ + + Sbjct: 64 ADD----RFSGTQKGVNLPVYHNGSMVAVIGISGPPGEVRTYARLAERITGLLIREREIG 119 Query: 123 HLLAQDSRLREELVMNLIQ----AEEN-TPALTEWAQRLGIDLNQPRVVAIVEV 171 R ++ LI+ AEE AL EW GI + VA++ V Sbjct: 120 AFSRTQEERRSYVINGLIRREPMAEEYLKEALAEW----GIARGTGKRVAVIRV 169 >UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKH8_CLOCL Length = 544 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 8/161 (4%) Query: 225 EDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCY 284 ED K +E T ++ + L +++ +G + G ++ SY AK ++ +G R+ + Sbjct: 380 EDFCKSLEN--TLIENFQTLDYKIGVGRCYEGLENVRCSYEEAKNSIGIG-NRLNKKSMI 436 Query: 285 FYQDLMLPVLL--DSLRGDWQ--ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLAT 340 FY L + LL D L + + N + L + L++ TL +F+ N Sbjct: 437 FYDKLGVYTLLCHDGLNNELELFYNNTIKKLVDHDKKKSTELVK-TLEVYFQCNGNLNKI 495 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +K LF H NT+ YR+NRI+E+TG+D+ N ++RL L +AL++ Sbjct: 496 AKVLFTHYNTILYRINRINEITGMDIKNEENRLNLEIALRI 536 >UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5ERN2_9FIRM Length = 413 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/396 (22%), Positives = 160/396 (40%), Gaps = 31/396 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI-- 63 L+T I+ + +I IN+M+ G I+ S E IGE++ A + Q + + Sbjct: 8 LNTTTTTSILKKLEPLIPYPINIMNCEGMIVNSSVAEHIGEVNTAACKYMEQTHIPNPLQ 67 Query: 64 ----DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 D V H + + G ++G I L P Y L AE+MLEQ Sbjct: 68 PLGDTDMVTSMCHMI---------VRGHMIGAIELEKLPAADNTYLVLAKTVAELMLEQE 118 Query: 120 RLMHLLAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEV---DSGQ 175 LM ++ +++ L+ ++ L Q+ G++L+ PR +++ D + Sbjct: 119 YLMDEQKGNTSSLNDILAILVGVHPLDSSQLIADLQQHGVELSIPRTSLFIQLSKFDILE 178 Query: 176 LGVDSAMAELQQLQNALTTPER-NNLVAIVSLTEMVVLKP-------ALNSFGRWDAEDH 227 ++S L Q Q + + N L + L + +VL L+ + + E + Sbjct: 179 QPLESRKLVLDQKQYQYSVKQFLNQLPSYFYLKQDLVLSDLQEQNAVILSVNRKENPEVN 238 Query: 228 RKRVEQLITRMKEYGQLRFRVSL----GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 + +L TR+ E + + ++L G R Y + G+ PE Sbjct: 239 ALYLFELCTRLTEIAKREYCLALHAVIGIQCNKFSDYERQYEQLILRLSSGRLLFPERSV 298 Query: 284 YFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKA 343 + ++L + N + RL + +L TL +F + T++ Sbjct: 299 FLGNSIVLGNFIAHSSKKVLQNIVTYVYGRLLVSKMSRILLDTLGMFFECELNLTLTAQK 358 Query: 344 LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L+ HRNTL+ R ++I +LTG + N D L L +A Sbjct: 359 LYTHRNTLQKRFDKIEKLTGFSIHNADGLLTLRLAF 394 >UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZL0_9CLOT Length = 534 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 77/352 (21%), Positives = 167/352 (47%), Gaps = 34/352 (9%) Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVG-VIGLTGEPENLRK--YGELVC 109 +V + R ++ D + ++ H GIN E+ G +I L + E++ K Y L Sbjct: 189 MVTEEFRDFNLSDILNKY-HYYTIGIN------KEVYGYIIYLKHKGEDIEKDNYNALSH 241 Query: 110 MTAEMMLE-QSRLMHLLAQDSRLRE---ELVMNLIQAEENTPALTEWAQRLGIDLNQPRV 165 ++L+ Q ++ L +D E +++MN I+ +E + + A+ G DL++P Sbjct: 242 ANTALILDVQKKISSLQIEDKHKNEFVQDIIMNNIKFKE---EVNKRAEIFGWDLSRPIR 298 Query: 166 VAIVEVDSGQ---LGVDSAMAE----------LQQLQNALTTPERNNLVAIVSLTEMVVL 212 V ++++D+ + L ++S + ++ + + + R+ + A S + + +L Sbjct: 299 VMVIDIDNFKVEYLKLESKNSNEELEFIREKIIKNITQIIKSYFRDAIYATFSDSLVFLL 358 Query: 213 KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 +P R+D++ +K +++ +E + + +G++ I +SY A ++ Sbjct: 359 QPKDKDMKRFDSQ-IKKSSDEIRNSTREKFEFTVTLGVGDFKDDIMEIHKSYEEALMSIK 417 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMDN--NGLLRRTLAA 329 +G+ FY +L + LL S+ + + E + + ++ D N L +TL Sbjct: 418 IGRVLYKNDAAIFYGELGVFRLLYSVYENEEVMEFCKSSIGKIIDHDEKYNSELLKTLII 477 Query: 330 WFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 ++ + + ++FIH NT++YR +IS L DL ++ RL L +AL++ Sbjct: 478 ILENDWNLKSAADSMFIHYNTMKYRYKKISMLLDEDLNQYEVRLKLSLALKI 529 >UniRef50_Q896S3 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q896S3_CLOTE Length = 396 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 128/278 (46%), Gaps = 33/278 (11%) Query: 121 LMHLLAQ----DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAI-VEVDSGQ 175 +MHL+ + DS +++ + + E+ + + LGID+N+ VA ++ D + Sbjct: 121 VMHLIFEEGDADSIIQKYIKDIIFDIYEDEKLMVQRGNLLGIDVNRDYFVAFTLKFDENE 180 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALN---SFGRWDAEDHRKRVE 232 ++ M L+++ ++ NN + L P ++ S + +E Sbjct: 181 EINNNHMNCLKRVAKEISKYVTNN--------KNFELSPYIDADRSVSIIFQSSLKSNIE 232 Query: 233 QLITRMKEYGQLRFRVSLG--NYFTGPGSI-------ARSYRTAKTTMVVGKQRMPESRC 283 +++ +++ L+ L N F G GSI SY + + G +++ Sbjct: 233 KMLPYIEKGALLQVEHYLKGKNLFIGVGSIETNIEGIKNSYFNSIKAIKSGNIFKEKNKV 292 Query: 284 YFYQDLMLPVLLDSLRGDWQANELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATS 341 ++Y+D+ + +L + G E PL L K + + LL TL ++ N T+ Sbjct: 293 FYYKDMEIYCILKEVIG-----ECTEPLMNLVLKNVKDKDLLD-TLIKYYECNANLDETA 346 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 LFIH+NT++YRL +I E+TGLD+ +D LY+A+ Sbjct: 347 MELFIHKNTVKYRLQKIKEITGLDVKVHEDSFKLYLAV 384 >UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9D3_9FIRM Length = 359 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Query: 260 IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDN 319 ++ SY++A T + R E+ F+ D+ L +LL S+ + L + ++ L + Sbjct: 245 LSLSYQSALTALKYC--RSSENGIAFFDDMTLEILLSSISEQEKNAYLQKTISALSDEE- 301 Query: 320 NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 R L +F N+ L TS+ LF+H+NT++Y+LN I + GL+ F D +LLY+AL Sbjct: 302 ----RNLLQTYFEANMSLLGTSQKLFLHKNTVQYKLNHIYQKCGLNPRVFKDAVLLYLAL 357 Query: 380 QL 381 QL Sbjct: 358 QL 359 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 16/133 (12%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M LD +A +V +IN +D +G I S + +RIG H + Sbjct: 1 MFKMKLDKSLAFQVVNTIKDTCGQDINFIDKQGMIFASTNADRIGTFHAIGHKAAQTEQT 60 Query: 61 VDI--DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 +++ DD G ++GIN+PL G + VIG+TGEP+ +R+Y L Sbjct: 61 IEVFSDDDFP----GTQKGINMPLYYHGSFLAVIGITGEPDQVRQYVHLA---------- 106 Query: 119 SRLMHLLAQDSRL 131 R+ HLL ++ L Sbjct: 107 DRITHLLIREKEL 119 >UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C4ZEI3_EUBR3 Length = 361 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 28/238 (11%) Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL 212 A++L ID+ RVV IVE + + G EL+++++ ++ + A+ +VV Sbjct: 131 AKKLHIDIEVRRVVFIVETNREKDG-----NELEKIRSLFGGKSKDFVTAVDEKNIIVVK 185 Query: 213 KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 + A N +D D RK E ++ + ++ G ++RSY+ A+ + Sbjct: 186 ELAENE--TYD--DLRKTAEVILNLFRSEAD-GVHIAYGTVINELKEVSRSYKEARMALD 240 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARL--------KTMDN-NGLL 323 VGK E Y L + L+ +L PL ++ K+ D+ + + Sbjct: 241 VGKIFFEERNIIAYSQLGIGRLI---------YQLPIPLCKMFIKEIFDGKSPDDFDEEI 291 Query: 324 RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T+ +F +++ TS+ L+IHRNTL YRL+++ + TGLDL F+D + +AL + Sbjct: 292 LSTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTGLDLRVFEDAITFKIALMV 349 >UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGM2_MOOTA Length = 553 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 16/161 (9%) Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 R E+L R+ R V + + P IA + + +G++ + + + Sbjct: 396 RSCCEELAKRLDT----RILVGISRFIADPMKIAEGINQSHQALEIGRRAYERGQVFHFD 451 Query: 288 DL-MLPVLLDSLRGDWQANELAR----PLARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 DL + +LL S A E+ R L +L + D N L TL F +++ T Sbjct: 452 DLGVYRILLTS-----DAAEMQRFYDDILGQLVSYDEENKAGLITTLEMLFANDMNLQKT 506 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + ALFIH NTL YR+NRI ++TGLDL + DDRL L +AL++ Sbjct: 507 ADALFIHYNTLRYRINRIQQITGLDLKSPDDRLSLQLALKI 547 >UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELK2_OCEIH Length = 415 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 153/345 (44%), Gaps = 37/345 (10%) Query: 59 RVVDIDDAVAR---HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM 115 +++D DD V G+ I + +R + EI+G I + + + A Sbjct: 82 KLIDSDDPVVIPEIQEVGLGNRIAISVRKQNEILGFIWAHTSDKTFTEEEVFLFKEAATY 141 Query: 116 LEQSRLMHLLAQDSRLREE----LVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIV- 169 +++ L + Q +R EE L++ + NT + A++ I LN + + ++ Sbjct: 142 VKKYFLKN--RQHNRKSEEGYRDFFWQLLRGDLHNTDDINRQAKQYNIQLNGDKTIVVIR 199 Query: 170 ---EVDSGQLGVDSAMAELQQLQNALT-TPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 EV+ ++E Q N +T + N+ + +V L + K L F Sbjct: 200 FSDEVNEQMEKHAYYLSESQVKVNVITRLFDDNDFIMLVGLPKESNSKQLLYDF------ 253 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGN---YFTGPGSIARSYRTAKTTMVVGKQRMPE-- 280 ++QLI R+ E QL LG + P I +S+ AK + + +Q +PE Sbjct: 254 -----IQQLIQRIGE--QLNLNTVLGAGGLRYEQPQLIEQSFHQAKNVLKLQEQ-IPERL 305 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQP 337 + Y+DL + +D+L + P + RL++ D + L TL + + + Sbjct: 306 NDILLYEDLGVLQFIDTLAETRKDEHYYNPYMERLRSYDKRHQTSLLETLDIYLQCDSNV 365 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +K LF+H NT+ YRL RI E++G+DL N + + +Y+ L +D Sbjct: 366 YRAAKELFVHPNTMNYRLKRIKEVSGIDLKNANQKTNIYLDLLID 410 >UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria RepID=C4Z3X9_EUBE2 Length = 363 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 38/308 (12%) Query: 85 EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE 144 EG + +I G +++ G+L + +L + +D+ ++ L+ NL++ + Sbjct: 70 EGNLEYIIMARGTSDDVYMVGKLAAFQIQNLLVAYK--ERFDKDNFIKNLLLDNLLRVDM 127 Query: 145 NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIV 204 T A ++L I+ + RVV I+E + + L+ ++ R+ + A+ Sbjct: 128 YTRA-----EKLHIETDVKRVVYIIETKH-----EKDTSALETVRTLFANKTRDFITAVD 177 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSY 264 + ++L + +D D K + +I + V+ G ++RSY Sbjct: 178 E--KSIILVKEVKGNESYDELD--KTADVIIDMLNTEAMSAAHVAYGTIVNDIREVSRSY 233 Query: 265 RTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARL---------- 314 + AK + VGK Y L + L+ +Q L PL ++ Sbjct: 234 KEAKMALDVGKIFYSNKNVVAYNRLGIGRLI------YQ---LPIPLCQMFIKEIFEGKA 284 Query: 315 -KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 D+ L T+ +F +++ TS+ L+IHRNTL YRL++I ++TGLDL FDD + Sbjct: 285 PDDFDDETL--STINKFFENSLNVSETSRQLYIHRNTLVYRLDKIQKITGLDLRVFDDAI 342 Query: 374 LLYVALQL 381 +AL + Sbjct: 343 TFKIALMV 350 >UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=C9Z018_STRSW Length = 592 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 46/317 (14%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTA--EMMLEQSRLMHLLAQDSRLREELVMNL 139 LR GE++GV+ L ++ +Y A + LE S L HL + RL ELV +L Sbjct: 296 LRPRGEVLGVLALVDPLDDADEYTLFALEHAAISLALEMSHLRHLAEVELRLHRELVDDL 355 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE--- 196 + + T A ++ G DL++ + V +V+ S Q+ D+ + ++ +A+ P Sbjct: 356 LGGTDETSAYAR-SEAFGHDLHRIQYVVVVQWKS-QVSDDAFARTVGRVASAVGMPSLVT 413 Query: 197 -RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFT 255 R++ V +V+ + H + + + R E G + + Sbjct: 414 RRSDHVVLVA-----------------EGRPHEHALYEALAR--ETGTNDGTIGVSARCD 454 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL---------DSLRGDWQANE 306 P I Y+ A + V ++ F+ +L L +L ++ +W Sbjct: 455 TPDGIPGRYQEALRALEVRRRSRKRYGTTFFDNLGLYRILGPGNEYRELEAFVQEW---- 510 Query: 307 LARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L +L D + L TL+ +F T+ +L IHR+TL YRL RI E++G Sbjct: 511 ----LGQLTDYDGRHRTALVETLSRYFDCGGNYAETADSLTIHRSTLRYRLQRIREISGH 566 Query: 365 DLGNFDDRLLLYVALQL 381 DL N +DRL L VA ++ Sbjct: 567 DLTNVEDRLNLQVATRV 583 >UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGP6_MOOTA Length = 393 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 98/391 (25%), Positives = 167/391 (42%), Gaps = 51/391 (13%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGAL-LVLSQGRVVDID 64 L+ ++ Q ++ R + T I+V+D G+++ S + R+ H L L L++ Sbjct: 2 LNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTE------- 54 Query: 65 DAVARHLHGVR---QGINLPL----RLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE 117 GVR + LPL R+ G +V G+ GE L + + A + Sbjct: 55 -------DGVRVQGESYYLPLVINDRVAGWLVWQGGVKGEVATLLQAALEEILAAARRRD 107 Query: 118 QSRLMHLLAQDSRLREELVMNLI--QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 Q +R E LV +L+ +A L A G DLN PR V +++++ + Sbjct: 108 QQYFT------AREEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPRE 161 Query: 176 ---------LGVDSAMAEL-----QQLQNALTTPERNNLVAIVSLTEMVVLKPALN--SF 219 LG D +L +Q++ L ++ LVA +V+ K L + Sbjct: 162 NRYFNINLHLGYDVTEEQLKEEILEQIKGDLYLTAQD-LVAYYGREMLVIFKAFLEVENM 220 Query: 220 GR-WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 GR + A + R L +K+ RV+ G+ T + +SY+ A + +G Sbjct: 221 GRLYQALEVICR--HLYELIKDNRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCG 278 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGL-LRRTLAAWFRHNVQP 337 S ++D++ L+ SL G + L ++ G+ L T+ A +N+ Sbjct: 279 HNSGYIDFEDILFEALVCSLPGRLRGRYLEPLYQKIVAAGEEGIQLLETVEACIDNNMNI 338 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGN 368 T++ L++HRNT+ RL RI LTGLD G Sbjct: 339 KQTAEQLYLHRNTVTNRLERIKLLTGLDPGT 369 >UniRef50_B8FZU5 Putative transcriptional regulator, PucR family n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FZU5_DESHD Length = 515 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%) Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 FRV N FT I Y AK ++ +G + P Y + D++L + L + Sbjct: 369 FRVGYSNVFTSIVDIQAHYVQAKISLRIGLDQFPSRWYYKFSDIVLFYMESKLTEELDGQ 428 Query: 306 ELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L P + L + D N+ TL + + + + T+K LFIHR T+ RL RI EL Sbjct: 429 FLCSPKIIGLDSYDRANSSDYLHTLKVYLDNQMNAVKTAKDLFIHRATMVNRLERIKELA 488 Query: 363 GLDLGNFDDRLLLYVALQL 381 G++ + DD L + ++++L Sbjct: 489 GINFKDPDDILYIKISIRL 507 >UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB53 Length = 402 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 46/75 (61%) Query: 307 LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L PL L D +G L TL A+ H T+ AL +HR +L YRL RI+ELTGLDL Sbjct: 323 LPGPLRTLLAQDPSGRLTETLTAYLDHAGSAPRTAHALHLHRTSLYYRLQRITELTGLDL 382 Query: 367 GNFDDRLLLYVALQL 381 + D+RL L++ L+L Sbjct: 383 ADGDNRLTLHLGLRL 397 >UniRef50_B8G0W7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8G0W7_DESHD Length = 518 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Query: 223 DAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 D E ++R +L +K + F + Y+ A + +G + P+ Sbjct: 347 DTEADKRRFAELKKHLKNENA---ACGVSKTFHDFDMLGEEYKLANAALEIGSWKYPKEA 403 Query: 283 CYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMD--NNGLLRRTLAAWFRHNVQPLA 339 YFY+D+ML L + L + R+ D NN L +TL + LA Sbjct: 404 LYFYEDMMLEHLFSEGSRIFNLRSLCHDSVLRIAEHDQQNNSSLLQTLKVYLLQEKSLLA 463 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGN 368 S+ L IHRNTL YRL +I +++GLDL + Sbjct: 464 ASQELHIHRNTLVYRLGKIEQISGLDLNS 492 >UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliphilus RepID=A8ML41_ALKOO Length = 551 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 29/241 (12%) Query: 158 IDLNQPRVVAIVEVDS-----------GQLGVDSAMAELQQLQN--ALTTPERNNLVAIV 204 +D+N V+ ++ ++ GQ + S++ L + N + ++L ++ Sbjct: 317 LDVNDHFVLILIHIEEQEKAIRKDFVHGQTSLYSSLEGLIESHNLKGFIASKTDSLYVLL 376 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSY 264 S ++ AL +F + D E E I KE + +R+ +G + G + +SY Sbjct: 377 SFSQKNKGNVALKAFSK-DLE------EFFIYHFKE---VNYRLGVGREYKGLRQVHKSY 426 Query: 265 RTAKTTMVVGKQRMPESRCYFYQDLMLPVLL--DSLRGDWQ--ANELARPLARLKTMDNN 320 + + VG + E + F++DL + +L D L + + N+ PL + + Sbjct: 427 EDSVKAIQVG-TLLKERKIIFFEDLGVYKILCQDHLTEELERFYNKTIEPLVKYDEKKST 485 Query: 321 GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 L++ TL +F ++ S+ALF H NT YR+ RI ++TGL++ +DRL L + L+ Sbjct: 486 ELIK-TLEYYFEYHGNLKKISEALFTHYNTTLYRIERIKQITGLNIECSNDRLNLEIGLK 544 Query: 381 L 381 + Sbjct: 545 I 545 >UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FPE7_DESHD Length = 413 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 18/188 (9%) Query: 200 LVAIVSLT--EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGP 257 LV I+++ + V LK ALN+F + + R+ ++G+ R + +G P Sbjct: 231 LVIILNINGLKKVKLKTALNNF-----------INSFLDRLADHGKDRSSIGIGIGSGVP 279 Query: 258 G--SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ--ANELARPLAR 313 + +SY+ AK +GK +S CYF + L + + + + + PL Sbjct: 280 SITDLYKSYQEAKVAWELGKVFDHKSVCYFEEMGFLKFIFTQPARELEEFSQRVLGPLLE 339 Query: 314 LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 +N GLL +L + + Q SKAL++H NTL R+ +I ++TG DL D + Sbjct: 340 YDQAENTGLLD-SLRVFIEYKCQIAECSKALYVHENTLRNRIKKIEQVTGFDLRRVDHMV 398 Query: 374 LLYVALQL 381 +Y+ALQ+ Sbjct: 399 NVYIALQV 406 >UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEC1_9FIRM Length = 550 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 9/196 (4%) Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 +Q AL +++ + S T +V++ FG D E + E++ +MK ++ Sbjct: 352 IQEALQQKNIHSICRLQSATVIVLILEEGFLFGDADVELATELKEEIEQKMK---RVTVS 408 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF-YQDLMLPVLLDSLRGDWQANE 306 LG + G +A+S+ + + + Q++ + R F + DL LL S + + N Sbjct: 409 AGLGRPYRELGKLAKSFAEGEKALRIA-QKIGDDRGIFRFSDLGAFRLLLS-ENEAELNA 466 Query: 307 LARPLARLKTMD---NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 R D NNG L ++L + N + LFIHR+TL+YRLN+I+ LTG Sbjct: 467 FYRDTVERIVEDDRKNNGELLKSLKVYLDENRNIKEAASKLFIHRHTLKYRLNKIAGLTG 526 Query: 364 LDLGNFDDRLLLYVAL 379 DL N +D L L++ + Sbjct: 527 RDLDNSEDLLNLHLGI 542 >UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M3_SPHTD Length = 516 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 125/319 (39%), Gaps = 36/319 (11%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELV----CMTAEMMLEQSRLMHLLAQDSRLREEL 135 LPL G G + L G L + LV T ++L Q R L RL +L Sbjct: 219 LPLA-AGAPSGYLSLVGPAGTLNESDRLVLAQTAATCSILLGQGRTAGLGGGRQRLVADL 277 Query: 136 VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTP 195 ++ + ++ AQ LGID P +V +++ D A + AL Sbjct: 278 LLGRLASDAAA---LARAQMLGIDTTAPVIVGLIDAP------DRPAAARHLVAQALGPA 328 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFT 255 +NL + +V D + L ++ G V+L Sbjct: 329 VGDNLAPVPGGIGFLV-----------QGSDPSRAASALRPTLRREGGNGIAVALSRPVP 377 Query: 256 GPGSIARSYRTAKTTMVV---GKQRMPESRCYFYQDLMLPVLLDSLRGDWQA----NELA 308 R A+ T+ + G +P +R DL L LL L G+ + + Sbjct: 378 TILQAPEGLREARFTLGLQRAGAVTLPVARAGSVDDLGLFSLLYPLWGNPAVAAFRDAVL 437 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 PL ++GL+ TL + H ++ L IHRNTL YRL RI+ELT DLGN Sbjct: 438 GPLEDYDRRRHSGLIE-TLEVYLSHGGALAEAAEHLGIHRNTLSYRLQRIAELTRRDLGN 496 Query: 369 FDDRLLLYVAL---QLDEE 384 DRLLL VAL L EE Sbjct: 497 PRDRLLLQVALLTRHLPEE 515 >UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SGQ4_RHOSR Length = 534 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 24/272 (8%) Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQP-RVVAIVEVD 172 + ++ S L ++RL +L +L+ ++ A + A LG DL+ P RV+A+ Sbjct: 267 LAIDMSHRRSLAETEARLSRDLGADLLAGTDDDSAYSR-ADALGYDLHTPQRVLAV---- 321 Query: 173 SGQLGVDSAMAELQQ-LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 G D+ + + + + LT+ + + L+ + +L + D + V Sbjct: 322 --HWGPDTPVESVTEAFRRHLTSADSSALLVHGNEHRTGILAAVM---------DAKTDV 370 Query: 232 EQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 + T + K G + +G+ T P + SY A + + KQ + + +L Sbjct: 371 NIIFTALEKSLGPAVGVIGVGSECTSPSGLPDSYTHAIRALEIRKQSLSPRGVALFDELG 430 Query: 291 LPVLLDSLR--GDWQA--NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 + +LDS GD +A E PL ++ + TLA + + T++AL I Sbjct: 431 VYRILDSHSSTGDVEAFVQEWLGPLLAYD-REHRSTMTATLAQYLECGGKYDETAQALRI 489 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 HR+TL YR++RI ELTG DL + D RL L++A Sbjct: 490 HRSTLRYRMSRIHELTGRDLRSVDTRLNLHLA 521 >UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FWS7_DESHD Length = 407 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 3/137 (2%) Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANE 306 RV +G + P + RSY+ AK + + + ++++L + +L S + E Sbjct: 262 RVGVGRRYEQPSELFRSYQEAKVAVKLSALLKDKGPIVYFRELGVERILYS-HDKQELLE 320 Query: 307 LARP-LARLKTMDN-NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 R LA L+ D L TL + ++ AT+ ALF+H N+L YRL RI E+ L Sbjct: 321 FYREILAELEAQDKQKNELIETLENYLVYHCDLKATADALFLHPNSLRYRLKRIEEILDL 380 Query: 365 DLGNFDDRLLLYVALQL 381 DL +FD R+ L +A ++ Sbjct: 381 DLEDFDTRVSLVIAFKI 397 >UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVZ4_RHOOB Length = 539 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 22/261 (8%) Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L ++RL +L +L+ ++ A + A LG DL+ P+ V +V G D+ + Sbjct: 282 LAETEARLSRDLGADLLAGTDDDSAYSR-ADALGYDLHTPQRVLVV-----HWGSDTPVE 335 Query: 184 ELQQ-LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY- 241 + + + LT + + L+ + VL + D + V + +K+ Sbjct: 336 SVTEAFRRHLTATDSSALLVHGNEHRTGVLTAVM---------DAKADVNTVFASLKKSL 386 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR-- 299 G + +G+ T P ++ SY A + + KQ + + +L + +LDS Sbjct: 387 GPAVGVIGVGSESTSPSTLPESYTHAIRALDIRKQSLSPHGVALFDELGVYRILDSHSST 446 Query: 300 GDWQA--NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 GD +A E PL ++ + TLA + + T++AL IHR+TL YR++R Sbjct: 447 GDVEAFVREWLGPLLDYD-REHRSTMTATLAQYLECGGKYDETAQALRIHRSTLRYRMSR 505 Query: 358 ISELTGLDLGNFDDRLLLYVA 378 I ELTG DL + D RL L++A Sbjct: 506 IHELTGRDLRSVDTRLNLHLA 526 >UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4Y4_9CLOT Length = 382 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 56/113 (49%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD I+ R I ++N++ G II S +++R HE A + S R + I Sbjct: 2 LDYNSCIKIINRLTPIFTKDVNIIGLDGIIIASSNKKRENTYHEAARISASSNRNIIITT 61 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 G + G+N+P+ +++GV+G+TG E + YG L+ +M++ + Sbjct: 62 KNMHMYRGCKCGVNMPITYNNKVIGVVGITGTAEEVIPYGPLIKELVQMIINE 114 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 40/60 (66%) Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 +T+ +F ++++ T+K +++HRNT+ YRLN+ ++ G+D+ + +Y+A+ + EE Sbjct: 312 KTIKGYFINDMKIGETAKMMYVHRNTIMYRLNKFKKMYGIDITKPYECTKIYLAILIYEE 371 >UniRef50_Q897N0 Methyl-accepting chemotaxis-like protein n=1 Tax=Clostridium tetani RepID=Q897N0_CLOTE Length = 283 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 10/116 (8%) Query: 9 KMAQDIVARTM----RIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV--VD 62 K+ +D+ +T+ I + N+NVM G II + RER+G +HE A +++ G + Sbjct: 6 KIPKDVAEKTVDLLHNITEKNVNVMGKDGEIIATVQRERLGTIHEVASRIMN-GEIESSS 64 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 + A L+GV G N +++ GE++G IGLTG PE ++ L M A++M E+ Sbjct: 65 TTEEEAEKLNGVLPGYNGAIKINGEVIGCIGLTGAPEMVKP---LQQMAAKIMEEE 117 >UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FUW6_DESHD Length = 547 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 146/315 (46%), Gaps = 20/315 (6%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRLREELVMN 138 PL ++G IGL E L G L A ++L E ++ + + + + + + Sbjct: 230 PLAGHQGVLGYIGLGIEQGELNPVGRLFLYKAAVLLYFELAKAQSVEDTERQHYRDFLFD 289 Query: 139 LIQAEENTPALTEWAQRL-GIDLNQPRVVAIVEVDSGQLGVDS-AMAEL--QQLQNALTT 194 L+ ++ + + +L G+DL +P +V + E+ G D +M +L Q+L + ++T Sbjct: 290 LLYNNFDSLEVVQSRGKLWGMDLTKPHLVVVGEIP----GYDPDSMDQLAFQELLDTVST 345 Query: 195 PERNN--LVAIVSLTEMVVLKP--ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 R+ + + ++V+L P + +W+A + LI + + Sbjct: 346 ALRSQPRTIFLERNDQIVLLYPLEGMIPLSQWEATAKKLLSPLLILLEGLEEERSMMFGV 405 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL----MLPVLLDSLRGDWQANE 306 GN + I RS++ AK+ + +G+ + R +QDL +L L D++ NE Sbjct: 406 GNLYPSARFIHRSFQEAKSALELGQLFNLQERVILFQDLGVMRLLLNLEQQELEDFR-NE 464 Query: 307 LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 + PL + +NN L TL A+ + LF+H NTL YRL + +E+ DL Sbjct: 465 VLGPLLKFD-QENNLHLEETLLAYLASDGDLNLAGDRLFLHPNTLRYRLKKAAEVLDRDL 523 Query: 367 GNFDDRLLLYVALQL 381 + + R+ L++AL++ Sbjct: 524 NSLETRMNLFIALKI 538 >UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUG4_RUBXD Length = 564 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 27/247 (10%) Query: 156 LGIDLNQPRVVAIVEVDSGQLGVD------SAMAELQQ-LQNALTTPER----NNLVAIV 204 LG DL++ + AIV++D ++ A+ EL++ L +A+ R L+ Sbjct: 305 LGADLSRGALAAIVDIDEFARYLERRRLKEPAVQELKRRLADAVRLQARQLFSGFLLGPR 364 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY-----GQLRFRVSLGNYFTGPGS 259 S ++ L P+ + + R+R +L R++ Y L V +G Y P Sbjct: 365 SDNVILFLPPSPEA----PPDTLRERALELSGRVQRYVRGLLPDLTVSVGIGRYREDPAE 420 Query: 260 IARSYRTAKTTMVVGKQ-RMPESRCYFYQDLMLPVLLDSLRGDWQA-----NELARPLAR 313 + +Y A+ + +G + + P S F + +L L+ + E P R Sbjct: 421 LPEAYSEAEMALRIGHRIKGPSSVSTFEETGTYKLLFRVLQESPEELESFYAETVEPAVR 480 Query: 314 LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 GL++ TLA++ R++ T+ LF HR+T+ YRL RI ELTGLD+ +DR Sbjct: 481 YDLRYGTGLVQ-TLASYLRNDASTSRTASELFTHRHTIRYRLERIRELTGLDVDRSEDRE 539 Query: 374 LLYVALQ 380 L + ++ Sbjct: 540 RLALGIK 546 >UniRef50_UPI0001B584FA putative transcription regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B584FA Length = 378 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 43/66 (65%) Query: 318 DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYV 377 ++ G L RTL + H+ +P + ++AL +HRN+L +RL RI ELTG L DDR+ L++ Sbjct: 306 EHGGELLRTLRTYLAHDARPASAAEALTLHRNSLRHRLRRIEELTGRSLDRLDDRMELWL 365 Query: 378 ALQLDE 383 AL E Sbjct: 366 ALHARE 371 >UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus RepID=YCGP_BACSU Length = 411 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 16/144 (11%) Query: 248 VSLGNYFTGPGSIARSYRTA----KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + +GN + + +SY A K + G Q E+ Y Y L + L+S+ Q Sbjct: 270 IGIGNEYNHLLKLGKSYTEALEVIKAAEITGNQ---ENIPYEYAKLGIYRYLESIE---Q 323 Query: 304 ANEL----ARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 NE + LA LK D ++ L +TL + +N + ++ LFIH+NTL YR+ + Sbjct: 324 KNEFLEYENKDLALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQ 383 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 I+E+T +DL +F R LY+ L L Sbjct: 384 ITEMTSIDLSDFRTRCQLYLDLML 407 >UniRef50_A8RJG3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJG3_9CLOT Length = 316 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/306 (19%), Positives = 128/306 (41%), Gaps = 29/306 (9%) Query: 75 RQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE 134 + G +PLR + +G + L G + + EL+ T E++ E+ L ++ R++ Sbjct: 28 KAGAAMPLRFQKSRMGAVVLQGAGSSSSQLAELLSKTIELLYEELILSKKKQNRTQERDQ 87 Query: 135 LVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT 193 + + + + T + + LGID+ + ++E L +++ +QN L Sbjct: 88 FLYEWLHLQSDYTENFIKRGEHLGIDITGNHTIILMERKQDDLFTSTSI-----IQNLL- 141 Query: 194 TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 +R+ L+ + +++LK + E K+ ++I Sbjct: 142 -DDRDILLPLSQDQNLIILK---------ENEHFEKKYNRVIAAGHN--------CHTGI 183 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLAR 313 +G + +Y+ A ++ +GK P+ + ++ + L + L + + +A+ Sbjct: 184 CSGSAHLHTAYQAALESLKLGKILFPDEHLHCFEKMKLAIALSKTPIPGLEDSFSLLVAK 243 Query: 314 LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 + N L T + R N L IHRN++ YR+ RI E+ G +L ++ D L Sbjct: 244 GR----NAQLADTAITYIRLNGDIQKICDKLHIHRNSIPYRIRRIHEICGRNLMDYYDML 299 Query: 374 LLYVAL 379 LY + Sbjct: 300 CLYASF 305 >UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FPT8_9CLOT Length = 377 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 15/230 (6%) Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL 212 A++LGI++ + RVV ++E + D+ + E + L + V V ++++ Sbjct: 147 AKKLGIEVERRRVVFLIEPKNE---TDNIVLETMK---GLYATGSKDFVTSVDEGHIILI 200 Query: 213 KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 K + G + K + +T + RV+ G +++SY+ A + Sbjct: 201 KALETTEGYKELNMIAKSIVDTLTME---AMVNMRVAYGTIVNQLRDVSKSYKEAGMALD 257 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLR---GDWQANELARPLARLKTMDNNGLLRRTLAA 329 VG+ + Y +L + L+ L D E+ A + D L T+ Sbjct: 258 VGRIFYEQKNVLAYNELGIGRLIHQLPVSLCDMFLQEVFDGKA-VDQFDEETL--STVNQ 314 Query: 330 WFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 +F++N+ T++ L++HRNTL YRL +I +LTGLD+ FDD L +A+ Sbjct: 315 FFQNNLNISETARQLYVHRNTLVYRLEKIQKLTGLDVRVFDDALTFKIAM 364 >UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID=Q2RLZ7_MOOTA Length = 558 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL----DSLRGDWQ 303 + + + P I+ Y+ A+T + + ++ + F++D+ L +L ++L ++ Sbjct: 416 IGISSIAADPMEISERYQEARTAIRLARRLNGKGTVAFWEDVELYHVLGQSGETLERFYR 475 Query: 304 A--NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + EL RP + N L TL + +A++ L+IHRNT+ YRL RI EL Sbjct: 476 SVLGELDRP-----EVKNREELLETLRVYLECQGNVMASAAKLYIHRNTMRYRLQRIEEL 530 Query: 362 TGLDLGNFDDRLLLYVALQ 380 G DL + D+RL L++AL+ Sbjct: 531 LGRDLDSPDERLALWLALK 549 >UniRef50_C8XKF3 Putative transcriptional regulator, PucR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKF3_NAKMY Length = 705 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 40/64 (62%) Query: 318 DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYV 377 DN+G L RTL A+F + ++ LF+H TL YRL RI +LTGLDL +DR+ Sbjct: 630 DNDGALIRTLRAFFDADCSQRVAAERLFVHHKTLRYRLERIRQLTGLDLSRHEDRMRADF 689 Query: 378 ALQL 381 AL+L Sbjct: 690 ALRL 693 >UniRef50_A8VTS2 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTS2_9BACI Length = 307 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L+ ++ EL L L +D++ L+ T++ + +HN+ + +K LF+HRNT++YRL++ Sbjct: 214 LKLPYEVKELI--LEPLIAIDDDHELKETISVYLKHNMNTSSAAKELFMHRNTMQYRLDK 271 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 E T +D+ F + Y+ L LD Sbjct: 272 FIEKTSIDMKQFPNAAACYLMLALD 296 >UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZD57_EUBR3 Length = 365 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 15/145 (10%) Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-------MLPV- 293 ++ RV GN I SY+ AK + VG+ E Y L LP+ Sbjct: 214 AMIKVRVGYGNPTDVLPKITESYQEAKMALEVGRLFYVEKEIMAYDRLGIGRLIYQLPMS 273 Query: 294 LLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 L + + +E+ + L + M T++ +F +N+ T++ L++HRNTL Y Sbjct: 274 LCEMFIREVFGDEVPQILDDEEAMS-------TISKFFENNLNISETARQLYVHRNTLVY 326 Query: 354 RLNRISELTGLDLGNFDDRLLLYVA 378 RL RI + GLD+ FDD ++ +A Sbjct: 327 RLERIEKSIGLDIRTFDDAMIFKIA 351 >UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostridiales RepID=A9KIU4_CLOPH Length = 362 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 27/238 (11%) Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL 212 A++L I+ + RVV I+E + + L+ ++ +T ++ + A+ ++V Sbjct: 131 AKKLHIETDVRRVVFIIETKN-----EKDTNALETVRGLFSTKTKDFITAVDEKNIILVK 185 Query: 213 KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 + N + ED K + ++ + + V+ G ++RSY+ AK + Sbjct: 186 EVKQNE----NYEDLTKTAKVILDMLNTEAMTKVHVAFGTIVNEIKDVSRSYKEAKMALD 241 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARL--------KTMDN-NGLL 323 VGK Y +L + L+ +Q L PL ++ K+ D+ + Sbjct: 242 VGKIFYSGRNVVAYSNLGIGRLI------YQ---LPMPLCKMFIREIFEGKSPDDFDEET 292 Query: 324 RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T+ +F +++ TS+ L+IHRNTL YRL+++ + T LDL F+D + +AL + Sbjct: 293 LTTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTNLDLRVFEDAITFKIALMV 350 >UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSV2_9BACI Length = 532 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%) Query: 234 LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 L+ K+ QL +G + P ++ +SY+ A + +G + E+ Y +DL + Sbjct: 370 LVEAAKKDEQLLAEAGIGKCYPSPTALNKSYQEALMALKLGHEWSKENVVYHIEDLGVLR 429 Query: 294 LLDSLRGDWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 LL L D LA L D+ G TL W H++ T+ AL +H NTL Sbjct: 430 LLFYLNQDHLTEFSESYLAPLIQADSQGQTAYIHTLKMWIIHDMNVQETAAALHVHPNTL 489 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQL 381 R+ +IS L +DL N +D + + +A+++ Sbjct: 490 RNRMQKISSLLHVDLYNHEDFVNISIAVKI 519 >UniRef50_B1HSD1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HSD1_LYSSC Length = 356 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 24/286 (8%) Query: 106 ELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPAL-TEWAQRLGIDLNQPR 164 E + A + +EQ ++ + Q R E +++LI T L + L I L+ Sbjct: 75 EHAALIANLHVEQQNIIKSIEQ--RQMNEFLLDLINDNYQTKELLNKKLIDLDITLHDQY 132 Query: 165 VVAIVEVDSGQLGVD-SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD 223 ++A+V++ + + E+ N + NN++ + L +++ +N++ Sbjct: 133 IIALVQIQPINNAITLPSYHEILSFFNWSNLCKENNILTGLDLNSKIIILLPINNY---- 188 Query: 224 AEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAK---TTMVVGKQRMP 279 R ++ L+ + K + ++RF V + + S+ YR A+ T+V + Sbjct: 189 ----RSLLDHLVYDISKHFPKIRFSVGVSRKYNF-NSLKECYREARIALNTIVKQSANVQ 243 Query: 280 ESRCYF--YQDLMLPVLLDSLRGDWQAN----ELARPLARLKTMDNNGLLRRTLAAWFRH 333 +SR + +L L +L S D + E P+ + + + L TL + + Sbjct: 244 DSRLIIVEFSNLYLERVLYSENSDLEMRYIYMETLDPIIQYDKKNKSNFLD-TLEHFIKS 302 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 N+ T++ L++H+NT+ YR+ ISEL +D N + +LL +A Sbjct: 303 NMNIEVTAQQLYLHKNTIRYRMKLISELMNIDFNNLNTIMLLKIAF 348 >UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK00_BACSK Length = 410 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 11/140 (7%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQDLMLPVLLDS------LRG 300 ++ GN AR+Y AK + + K+ E + C FY + + + G Sbjct: 248 IAAGNPSFAVDGCARAYEQAKALLELKKRFGSELADCLFYYEAGAYKYIQPYEDTAMIAG 307 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D A E R +N L TLA + + A +KAL +H N+L+YRL RI+E Sbjct: 308 DHPAIEQLREY----DAENQTSLLETLAMYIEKDGHLTAAAKALHVHPNSLQYRLKRIAE 363 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 LTGL L N +R+ LY+ LQ Sbjct: 364 LTGLHLRNPAERIGLYLDLQ 383 >UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L341_THERP Length = 534 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 37/307 (12%) Query: 73 GVRQGINLPLRLEGEIVGVIGLT--GEPE---NLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 G+R+ + P+ L GE+VG++ + GEP +LR + A + +Q L L Sbjct: 230 GLRERVVCPIWLHGELVGLVWIIEGGEPLSGLDLRAAEHAALVFALLFAQQRELAQL--- 286 Query: 128 DSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 ++RL + +I+ +P E A+ LG D + VA++ + L V++ Q Sbjct: 287 EARLGYAFLNTVIEGRFSGSPEELERARALGYDPARRYRVAVIALGEPPLTVEAFQRREQ 346 Query: 187 ---QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +++ L LVA V + ++ + E H +R+ Q E Sbjct: 347 VALRVRRVLRQLAAAPLVATVHDQVIALV----------EQEAHLERIWQ------ELAG 390 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 G GP + RSYR A T + + + Y Y+DL VL L GD + Sbjct: 391 CGLTAVAGRAHAGPDGVRRSYREACTLL----EYVSRPGLYRYEDL---VLERVLAGDSE 443 Query: 304 ANE--LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 A + L+ L L+ + L TL W R A ++ L +H NT+ YRL + L Sbjct: 444 ARQAFLSLWLGPLERARHGDRLVETLVHWVRARFSVNAVAEELGVHPNTVRYRLEQAGTL 503 Query: 362 TGLDLGN 368 G DL + Sbjct: 504 LGRDLSD 510 >UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8G125_DESHD Length = 555 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 25/274 (9%) Query: 128 DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDS-----------GQL 176 + + + +L+ +++ E ++ E + DLN+P V + ++ + ++ Sbjct: 277 EYKFKNDLIEHILSGELSSTNAQERINLMEWDLNRPYYVVLFDLKNLDAYHVEHRTQQKM 336 Query: 177 GVDSAMAELQQ-LQNALTTPERN----NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + S +E+ + + T R+ N V I+ L V P NS + + ++ Sbjct: 337 ALQSIKSEITSTISGVIKTRTRDFIIGNKVDIIVLLWPVAANPQENSLEKI-KKIAKQAQ 395 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 EQ+ RMK +L V +G+ G I RSY+ A + G ES + +L + Sbjct: 396 EQVKKRMK---KLIVEVGIGDLAHGAEEIPRSYKEALDALSYGGMISNESAIVAFSELGV 452 Query: 292 PVLLDSLRGDWQANELARPLARLKTM----DNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 +L + + E P A L+ + DN L +TL + N +K LFIH Sbjct: 453 FRILCKF-AERNSLEEFIPKALLRILRYDKDNEAELLKTLEVFLECNGNASRAAKELFIH 511 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T+ YRL RI E+ LDL + +RL L + L++ Sbjct: 512 YKTILYRLERIKEVGQLDLEDSKNRLELEMGLKM 545 >UniRef50_Q0RXQ9 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXQ9_RHOSR Length = 424 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP-VLLDSLRGDWQ 303 RF V + TG G+++ +YR A+ + Q E+R FY D ML ++ S Sbjct: 287 RFVVGVSRAHTGLGTVSSAYREAQDA-IASTQVTDETRAQFYADAMLDHIVASSPFKSVL 345 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 E+ PL + D+ L TL A+ T+K+L + NT+ YRL RI ELTG Sbjct: 346 YEEVIEPLEQYD-RDHRAELVATLRAYCASGFNLAGTAKSLIVQPNTVRYRLKRIHELTG 404 Query: 364 LD 365 D Sbjct: 405 QD 406 >UniRef50_B2V2N8 Putative uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B2V2N8_CLOBA Length = 313 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 13/180 (7%) Query: 201 VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY-FTGPGS 259 V+I+ E ++L L +F D EDH + + I + L R + Y + Sbjct: 138 VSILEYNEYIIL---LGTFE--DIEDHISSITETI-----HNNLYKRCYISYYEVKDYNN 187 Query: 260 IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDN 319 I Y+ + + K+ +R + + L+ ++DSL + + L++ +D+ Sbjct: 188 INSLYKEGIYKISLAKKYNISNRIFNEKSLLFESIVDSLSEEKKVKILSKFNDGFNKLDD 247 Query: 320 NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 + + T+ +F ++ ++K L++HRNTL YRL++I + T D+ NF++ +L +A Sbjct: 248 DTI--NTIEVFFNCDLNLSESAKNLYVHRNTLIYRLDKIKKCTSYDIRNFNEAILFKIAF 305 >UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1H8_CLOB8 Length = 405 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 7/153 (4%) Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 QL T+ + G + V +GN + + +S A+ + K + + Y+D+ + Sbjct: 251 QLATKNRMDG-MSVSVGIGNSYKDLKMMKQSLNEAELAIDSAKCQGLDDTITRYKDIGIY 309 Query: 293 VLLDSL--RGDWQ--ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 LL S+ R Q +E+ P++ DNN L L + N T++ LF+HR Sbjct: 310 SLLFSVENRSILQNYFSEVLGPISGADNKDNN--LIEILEMYLNENCNITVTAEKLFLHR 367 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 NTL+Y++ +I EL DL NF+D + + +AL + Sbjct: 368 NTLKYKIKKIEELLNCDLRNFNDCIKVKIALDI 400 >UniRef50_C1I8N8 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I8N8_9CLOT Length = 302 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANE 306 ++S+ + ++Y A + +G++ + Y+ +D+ L + +L ++ +NE Sbjct: 166 KISISDLDYTFDGFKKAYNGAVQALEIGRKFKIKPEIYYLKDMYLEKAIFNLSSEY-SNE 224 Query: 307 LARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L + N+ L++ TL + ++ +K L+IHRNTL YR+ +I + TG D+ Sbjct: 225 LKEEYKDIFKGFNHELIQ-TLEEILKCDLSLTKAAKNLYIHRNTLMYRIEKIKKETGFDI 283 Query: 367 GNFDDRLLLYV 377 NF + LY+ Sbjct: 284 RNFKEATFLYI 294 >UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QWK2_MYCS2 Length = 517 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 27/280 (9%) Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDS 173 + LE +R L A +SR EL+ ++ + E + GID + V V V Sbjct: 251 LSLEVTRQQALQAIESRFSSELLEMVLSGAARARDVAERLRAFGIDPSSALAVYTVVVGD 310 Query: 174 GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV-- 231 G + + E++ N + P V I + VV+ FG W HR Sbjct: 311 GAVRPPGSTDEIEDFFNRHSIPA----VVIPGSQDTVVV------FG-W----HRDMTAL 355 Query: 232 ----EQLI-TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 E L+ T + R + +G+ ++ A+ T V ++R E + Y Sbjct: 356 VGLAEDLVQTLTARFPADRAVIGVGDLAADASALREPLIRARETCHVLRRRTTEPKVGTY 415 Query: 287 QDL----MLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 D+ ML L D A+++ PL + L+R TL + ++ T+ Sbjct: 416 ADIGTHRMLLGLHDRSVLRRFADDILGPLDQHDEQYGTALVR-TLRTFLANDGHWAKTAT 474 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 L++H NTL R+ RISELTG D+ +DR+ L++AL+ D Sbjct: 475 ELYVHVNTLRNRIARISELTGRDVARLEDRVDLFLALEAD 514 >UniRef50_A1SI66 Transcriptional regulator, CdaR family n=16 Tax=Actinomycetales RepID=A1SI66_NOCSJ Length = 403 Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 5/77 (6%) Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 +E+ PL R + G L T+ A+++H AT++ALF+H NT+ YRL +++ELTGL Sbjct: 317 DEVYLPLVRAR-----GTLIETIGAYYQHGSSIEATARALFVHPNTVRYRLRQVAELTGL 371 Query: 365 DLGNFDDRLLLYVALQL 381 G D L +AL L Sbjct: 372 APGRARDAFTLEIALVL 388 >UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PB06_CLOTS Length = 349 Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 9/143 (6%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR-CYFYQDLMLPVLLDSLRGDW 302 ++ + + N I++ YR A + +GK+ R YFY+ L LL L D Sbjct: 206 IKIDIGVSNKAYNFTDISKGYREASIALKLGKKIDNNERGIYFYRSYALEELLLELPEDV 265 Query: 303 QANELARPLARLKTMD----NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + R L L + N+ L TL ++FR+++ TS+ L+IHRNTL YRL++I Sbjct: 266 ----IKRFLEALTDGELDYFNDDELVSTLNSFFRNSLNLSETSRDLYIHRNTLVYRLDKI 321 Query: 359 SELTGLDLGNFDDRLLLYVALQL 381 +LTG D F+D ++L V + Sbjct: 322 HKLTGFDPKQFNDAVMLKVIMTF 344 >UniRef50_Q0SC55 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SC55_RHOSR Length = 414 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 4/136 (2%) Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 R+++GN G +S+ A + + R E++ Y D+ + LLD D Sbjct: 270 IRIAIGNPGKGIQGFRQSHIEAIAAQRISESRPAETQLICYADVEIVHLLDG-HPDAARA 328 Query: 306 ELARPLARLKTMDN-NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 ++R L L D + +LRRTL + N P A ++AL +H+NT+ YR+ R EL G Sbjct: 329 LVSRELRGLDGTDAASAMLRRTLRGYLTVNRSPDAAARALGVHKNTVRYRIQRAEELLGR 388 Query: 365 DLGNFDDRLLLYVALQ 380 +G +RL L +AL+ Sbjct: 389 PVG--PNRLKLELALE 402 >UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostridia RepID=B9MKN7_ANATD Length = 364 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%) Query: 212 LKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM 271 LKP N ED K ++ + L+ + +G+ ++ SY+ A+ + Sbjct: 188 LKPGSND------EDAYKVARIILDTLNSELLLKAYIGIGSVVDDIKELSMSYKEAEAAL 241 Query: 272 VVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWF 331 +G + Y L L L+ + L +K D + L +T+ +F Sbjct: 242 KIGYIFEKDKYIVSYHKLGLGRLIYQMPTKLCEMFLEEVFKDVKLSDFDPELIQTVEMFF 301 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 N+ T++ L+IHRNTL YRL++I + GLDL F+D ++ +A+ +++ Sbjct: 302 ECNLNVSETARQLYIHRNTLVYRLDKIERMIGLDLRKFEDAIIFKMAMLVNQ 353 >UniRef50_B7GF27 Transcriptional regulator n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GF27_ANOFW Length = 293 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ R +G +AR + K VG + P R Y +D+ P+LL S Sbjct: 159 IQLRAYIGQKCLHSVELARIFAAEKRYFHVGLKHNPAQRVYCIEDV-FPLLLIS------ 211 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 E+ L + + +T+ +F N+ +K L +HRN+L+YR+++ E T Sbjct: 212 GEEMTYATMFLHAVKQEHDMLKTIKMFFECNLNVSLAAKKLHMHRNSLQYRIDKFIEKTS 271 Query: 364 LDLGNFDDRLLLYVALQLDEER 385 +D+ F L +Y+A+ L E Sbjct: 272 IDIKQFKGALTVYLAILLHEHH 293 >UniRef50_UPI0001C3115D transcriptional regulator, PucR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3115D Length = 512 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%) Query: 292 PVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 PV+L +L ++E+ RPL R ++NG L +L +F + S LF+H++TL Sbjct: 412 PVVLRAL-----SDEVLRPL-RDYDREHNGSLLESLRVYFEQERRLSVASDVLFVHKHTL 465 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YRL RI +TG +L DD +LY+AL+ E Sbjct: 466 AYRLKRIEAITGRNLNEMDDLCVLYLALKASE 497 >UniRef50_C4GC67 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GC67_9FIRM Length = 298 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%) Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 V L+ M + +V N + +Y+ T++ +GK P + Y L Sbjct: 139 VSALLDTMASEAMIPVKVVYDNQTVTLADLPAAYQDLVTSLAIGKTFYPAEQVYESASLG 198 Query: 291 LPVLLDSLRGD-----WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALF 345 L L+ L D Q + L R MD + L R + F +N+ T++ LF Sbjct: 199 LARLIFRLPEDVCQRYLQEHFLDYDFGR---MDADTL--RAIHTLFHNNLSLSETARQLF 253 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 IHRNTL YRL++ + +GLD+ NFD+ + + + + Sbjct: 254 IHRNTLAYRLDKFQKASGLDVRNFDEAITCRIGMMI 289 >UniRef50_C0WRU8 Sugar diacid utilization regulator n=2 Tax=Lactobacillus RepID=C0WRU8_LACBU Length = 395 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%) Query: 259 SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ-ANELAR-------P 310 ++ RS+ A M V K ++ FY+D+ L W+ N+++R P Sbjct: 269 NLHRSFTEACFGMDVAKTMDWQNHPVFYRDVSL----------WELVNQISRIQDSRLYP 318 Query: 311 LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 + + + N + T+ +F HN TS+AL+ H NT+ YRLN I + TGLD + Sbjct: 319 VEMDQILTNKEVFE-TVQQFFNHNESIKETSEALYTHPNTVRYRLNMIYKQTGLDYRRTN 377 Query: 371 DRLLLYVAL 379 D+ L+Y+AL Sbjct: 378 DKFLIYIAL 386 >UniRef50_D2SBY7 Putative transcriptional regulator, PucR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SBY7_9ACTO Length = 374 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Query: 300 GDWQ-ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 G W+ A L P ++ + + +L T W S AL +HR TL YRL RI Sbjct: 288 GGWRLAAALPGPDPVVRPLLADPVLTATAETWLDAGCSAARASAALHVHRQTLYYRLARI 347 Query: 359 SELTGLDLGNFDDRLLLYVALQ 380 +ELTGLD+ + D RLLL+ +L+ Sbjct: 348 AELTGLDVADGDARLLLHASLR 369 >UniRef50_C9S1P6 Putative transcriptional regulator, PucR family n=2 Tax=Geobacillus RepID=C9S1P6_GEOSY Length = 739 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 19/317 (5%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR--LREELVMN 138 P+ G+ VG + + P + + L A + + L +++ L++ + Sbjct: 412 PIHNGGDAVGYLAIETSPNEMDDFFLLGVELARNIFSIQFMKQKLVFETKEQLKDSFLHK 471 Query: 139 LIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEV----DSGQLGVDSAMAELQQLQNALT 193 L+ AE E+ ++ ++A ++ + +A++ + +G + + AE L N L Sbjct: 472 LLAAEIEDEESIIQYANVFQWNIFEEHRLAVLHLQMDESNGTVDLVKQNAEKTVLWNRLK 531 Query: 194 T---PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 E ++L+ + +++ PA R E + Q I+R + +RV L Sbjct: 532 VRIAAEDSSLLYGAVEDQYILIAPAARE--RKKPEKYWSEWHQRISRWINEEKTSYRVFL 589 Query: 251 G--NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR----GDWQA 304 G + G SYR A M V + P F+ +L +L L+ Sbjct: 590 GIGGKASSIGDYYVSYRQAMQAMQVMIRNFPGKSVAFFDELGAYTVLHHLKELEAAKLFV 649 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 ++ PL R ++ N +T+ + N T++ L+IHR+TL+YRL +I E+ G Sbjct: 650 DKYLGPLLR-HSVGRNADWLQTVRVFLDCNGHLTETAERLYIHRSTLQYRLEKIEEMLGF 708 Query: 365 DLGNFDDRLLLYVALQL 381 L + R L +AL+L Sbjct: 709 SLQGAEQRFNLMMALKL 725 >UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J053_9BACL Length = 415 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 12/140 (8%) Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESR--CYFYQDL----MLPVLLDSLRGDWQA 304 G ++ G + SYR A + V KQR P+ Y DL LP + + L+ +A Sbjct: 272 GCLYSEYGRLEDSYREALLLLEV-KQRFPKETGDLVIYSDLGYYRYLPRIWEELQRHGRA 330 Query: 305 NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 LARL+ D ++ L TL + H+ ++AL +H NTL YRL RI+E+ Sbjct: 331 GS---QLARLRAYDQEHHSELVHTLEVFLAHDSNAKTAAEALHVHANTLNYRLKRIAEIG 387 Query: 363 GLDLGNFDDRLLLYVALQLD 382 +DL + + ++ LY+ L+ + Sbjct: 388 RIDLTSMEQKVTLYLELKAE 407 >UniRef50_B5CNT1 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNT1_9FIRM Length = 405 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 3/120 (2%) Query: 267 AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLL 323 A M +GK+ SR +FY+D LP +L + N P + +L+ D ++ Sbjct: 285 AADAMCIGKRLDVHSRIHFYKDYYLPAILMPRINEMPRNNYISPVIEKLREYDKKHSTDF 344 Query: 324 RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 TL + R+ ++ L IHRN+ YR+N+I E+TG+DL + + L + + ++E Sbjct: 345 LDTLKVYIRNLCSTSDSAAQLHIHRNSFLYRINKIEEITGVDLREYHMFIHLAINIYIEE 404 >UniRef50_O87552 Leucine-rich protein transcriptional regulator n=1 Tax=Bacillus firmus RepID=O87552_BACFI Length = 296 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Query: 293 VLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 VLL L + E+ R + RL +++ N+ L T+ +F HN+ +KAL +HRN+ Sbjct: 202 VLLLYLMRNSTGKEMDRIIQRLISVELLNDKELLTTVGTYFSHNLNTTQAAKALHMHRNS 261 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L+YR+++ + TG+D+ F D L+Y+ L Sbjct: 262 LQYRIDKFVDRTGIDIKQFSDAALVYMLL 290 >UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces RepID=B5HPQ6_9ACTO Length = 569 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 34/311 (10%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL--LAQ-DSRLREELVMN 138 +R G+++GV+ L ++ A+ L Q LMH+ LA+ + RLR +L+ + Sbjct: 273 VRPRGDVLGVLALDDPEATADEHTVFALDHAQRSLAQE-LMHMRELAEVELRLRRQLIDD 331 Query: 139 LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN 198 L++ E T A A+ +G DL + V +V P+ + Sbjct: 332 LLEGTEETSAYAR-AEAVGHDLQRTHYVVVVHWPG-------------------NAPDDS 371 Query: 199 NLVAIVSLTEMVVLKPALNSFGR-----WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 A+ T + +P + G +A + V + E G + + Sbjct: 372 FTRAVEQATAISATRPLITRRGDRMVLLTEARPYDDAVYTALA--HELGTPGGAIGVSTR 429 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LA 312 P I R Y+ A + V + S F+ DL L +L + + R L Sbjct: 430 CDSPDDIPRCYQEALRALDVRQNSRQRSGTTFFDDLGLYRILGPGNDLRELEDFVREWLG 489 Query: 313 RLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 +L D ++ L TLA +F + AL +HR+TL YRL RI E++ DL + D Sbjct: 490 QLIDYDAEHDTELVETLARYFDCGGNYDDAAAALTVHRSTLRYRLQRIREISDRDLADVD 549 Query: 371 DRLLLYVALQL 381 RL L VA ++ Sbjct: 550 TRLNLQVATRV 560 >UniRef50_B0A6R8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6R8_9CLOT Length = 389 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/234 (20%), Positives = 109/234 (46%), Gaps = 11/234 (4%) Query: 154 QRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT---TPERNNLVAIVSLTEMV 210 +R+G VVAI+E++ + ++ A + +++ + + RN+ A V++ + V Sbjct: 157 ERVGFKCGWDYVVAIIELEDDEYNTNNIPAYAEMVKSYIEKKLSYIRNDYFA-VNIGKSV 215 Query: 211 VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTT 270 A+ + + D E + E I+ K++ L+ + +G + + Y AK Sbjct: 216 ----AIVFYNKTDLEVEKIMKELYISMNKDFRNLKLFIGIGKRVNNLKLLYKGYEEAKNV 271 Query: 271 MVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA-RPLARLKTMD--NNGLLRRTL 327 + + Y ++ + LL + E + + L D NN L Sbjct: 272 AKINRLISNNKVHIRYSEMAIYRLLLEMENKEIIKEFHDQTIGDLVVYDKVNNTDYVELL 331 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 ++F +N + T+K+L++HRNT+ Y++++I E+ ++L + D+ +Y++L + Sbjct: 332 ESYFENNCKINETAKSLYLHRNTVNYKISKIEEILDINLDDIGDKSKIYLSLMI 385 >UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UQQ0_9BURK Length = 604 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 37/322 (11%) Query: 81 PLRLEGEIVGVIGLTGEPEN-----LRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREEL 135 PL ++GEIVG + G+ E+ L ++ ++M R ++R EL Sbjct: 285 PLSVDGEIVGALLSFGDGEHNDLRMLAIENAKFAVSVQLMRSVIRFR----AETRTLTEL 340 Query: 136 VMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT 194 +++ + + E A+RLG+ L P + +V+ ++ AE ++ L Sbjct: 341 FFEIVERRWRDANDVLERARRLGLSLTTPTRLLVVDYPHRPAASENRSAECNRVTAMLAA 400 Query: 195 PER---------NNLVAIVSL---TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 ++ LV ++ L T+ V A+ +FGR +L + + Sbjct: 401 QQKLVVHTITVGEGLVCLLPLDGGTDESVANAAMTAFGR-----------RLCSTLAPLL 449 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-MLPVLLDSLRGD 301 + LG+ F G ++A+ + + + + M +S DL LP+L+ + Sbjct: 450 GREPILVLGDTFAGLEALAKEWERCWRMIKIARG-MGKSGALSVPDLGPLPLLIGAADSP 508 Query: 302 WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + L D ++ TL+A+ RH + A + A+ +H TL YRL+RIS Sbjct: 509 DVRAFMTGTIGPLIEYDQGHHTPYMETLSAYIRHGCRSQACADAMGLHVTTLRYRLSRIS 568 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 +L G+D+ + R + +ALQL Sbjct: 569 DLFGIDVETPERRFAVELALQL 590 >UniRef50_UPI0001C3120E transcriptional regulator, CdaR n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3120E Length = 416 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 19/242 (7%) Query: 149 LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTE 208 LT A RLG DL++ V E+ + + +++ + L + Sbjct: 170 LTRRAARLGCDLSRGAVALCAELAAAGGAAGAGADAGERVVATIADSHPGALAQAIDGRA 229 Query: 209 MVVLKPAL---NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYR 265 +L PAL N G A +L+ R++ YG R L + ++ R+ R Sbjct: 230 YAIL-PALAAANGDGEEPAAGTLAAARRLVPRLEPYG----RAGLSGFQPDAAALPRALR 284 Query: 266 TAKTTMVV----GKQRMPESRCYFYQDLMLPVLL---DSLRGDWQANELARPLARLKTMD 318 A+ + V G + Y+ L+ VL D LR + + A P+ R Sbjct: 285 EAELVLDVLRRDGGATSEDVGSGTYR-LLFRVLASHPDELRSFYA--DTAAPIVRHDDRH 341 Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 ++GL+R TL A+ + AT+ A+ HR+T+ +RL+R+ ELTGLD +DR L + Sbjct: 342 DSGLVR-TLEAYLAQDCNVGATAVAIGAHRHTVAHRLDRVKELTGLDPLRSEDRERLGLG 400 Query: 379 LQ 380 L+ Sbjct: 401 LK 402 >UniRef50_B4V7K8 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V7K8_9ACTO Length = 250 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 37/63 (58%) Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 G+LR TL + HN T++AL +H NT+ YR+ R+ LTG DL D +L LY A Sbjct: 187 GEGMLRETLEVFLAHNCSWTRTAEALHLHVNTVHYRIERVETLTGRDLSRLDHKLDLYAA 246 Query: 379 LQL 381 L+ Sbjct: 247 LRC 249 >UniRef50_B8ETI6 Transcriptional regulator, CdaR n=1 Tax=Methylocella silvestris BL2 RepID=B8ETI6_METSB Length = 741 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 248 VSLGNYFTGPGSIAR----SYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 VSL +GP R +R A + V + R + Y D+ + LL +LRG Sbjct: 595 VSLKAGISGPCGDLRKLPACFREATVALEVAQYRHGQP-VACYSDIGVLGLLINLRGKTD 653 Query: 304 ANELARPLARLKTMD---NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 ++ + T + + +L T+ +F + +AT+ L +H+ T+ YRL ++S Sbjct: 654 IRRVSEEILGELTSEPQPSRKILLETMQTFFECDCSQIATAAKLGVHQKTIAYRLGKVSR 713 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 LTGLDL DRLL + ++L Sbjct: 714 LTGLDLARHQDRLLADIGIRL 734 >UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SNX8_METPP Length = 645 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 27/314 (8%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELV---- 136 P+ +EGE V I T E + + EL ++ RL A SR R E + Sbjct: 323 PIFVEGEAVAWILGTLEDAHRSELIELTLTQVAVIAALQRLEQRSA--SRARSESIDATL 380 Query: 137 MNLIQAEENTPALTEWAQR-LGIDLNQPRVVAIVEVDSGQLGVDSAMAEL--QQLQNALT 193 +L++A+E A L +DL P + + E+ + G + + Q++ A+ Sbjct: 381 WDLLRADETARAAAIDRAADLKLDLEGPMRLYLCELGATVPGSAQSSGSILRQKITRAVE 440 Query: 194 T--PERNNLVAIVSLTEMVVLK-PALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 T E+ +A+ ++ V+ AL+ DAE K + + I+ G + V Sbjct: 441 TVRGEKARAIALQGISIAVLCSDQALD-----DAERFAKGLAEAIS--DGLGGRQVVVGG 493 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP 310 + P ++A +YR A+ + V +Q M ++ Y + +L SLR D Sbjct: 494 SSRCHVPRALAIAYREAQIALDVSRQ-MGKTASVVYDRAGVVGMLLSLRHDVGMRRFLEL 552 Query: 311 LARLKTM---DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 L +TL +F N A S+ L +HR T+ +RL RIS+LTGLDL Sbjct: 553 NLGELLNEEPKQRDLFLQTLRVYFDVNCSHEAASQRLGVHRKTVAHRLGRISDLTGLDLS 612 Query: 368 NFDDRLL----LYV 377 DDRL+ LYV Sbjct: 613 THDDRLVADLSLYV 626 >UniRef50_UPI0001788C88 putative transcriptional regulator, PucR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C88 Length = 404 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 2/115 (1%) Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKT-MDNNGLLRRT 326 + TM +G+ + + L L L+ S+ ++Q N+ R A T + + T Sbjct: 284 RETMTIGRTFQVKEHIHLSTGLHLERLVYSI-PEYQRNQFLREYAAGHTDLFEDSETLST 342 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L ++F + T+K L+IHRNTL YRL++I + TGLD+ +F D +L+ + L L Sbjct: 343 LESFFELDCNVSETAKHLYIHRNTLLYRLDKIKQETGLDVRSFSDAVLVKITLLL 397 >UniRef50_Q0SG00 Putative uncharacterized protein n=2 Tax=Rhodococcus RepID=Q0SG00_RHOSR Length = 393 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 7/137 (5%) Query: 247 RVSLGNYFTGPGSIARSYRTAKTTM-VVGKQRMPESRCYFYQDLMLPVLLDSL--RGDWQ 303 R+ + + F PG +R+ A+ G +R Y+ + + +LL S+ G Sbjct: 254 RIGVSSVFGRPGGTSRAVEQARIARRCAGHGGCTPTR---YESVPVSLLLVSVPDAGKLA 310 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +N++ P+ L + LL TL AWF A + L HRNT+ YRL RI LTG Sbjct: 311 SNQILGPVLALPAEEQESLLA-TLDAWFSCRGSTTAAATQLHYHRNTVLYRLRRIHTLTG 369 Query: 364 LDLGNFDDRLLLYVALQ 380 D + D LYV L+ Sbjct: 370 RDFSDPIDAAELYVGLR 386 >UniRef50_UPI000169310C YsfB n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169310C Length = 75 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 39/64 (60%) Query: 318 DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYV 377 D +G L TL + N +P T++ L IHRNTL YRLNRI+E+TG D F D L + Sbjct: 4 DKSGELYDTLQVFLAENGEPHRTTERLIIHRNTLRYRLNRITEITGKDPRRFHDLFQLQM 63 Query: 378 ALQL 381 AL L Sbjct: 64 ALWL 67 >UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FU02_DESHD Length = 404 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 6/142 (4%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG--- 300 ++ S+G+ + + RSY+ AK + +GK + + F+ +L L + R Sbjct: 256 VKLWASVGSIYPDQPLLYRSYQEAKVALEMGKVLGKKEKLTFFNELGAIRLFYNQRKQDL 315 Query: 301 -DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 D+ L L +T D N LL TL ++ A +K +FIH NTL YRL ++ Sbjct: 316 RDFFEETLGPVLKYDRTNDGNLLL--TLWHYYASGGDISAATKGMFIHANTLRYRLRKVE 373 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 ELT L + + R +Y AL++ Sbjct: 374 ELTASSLDDQEVRFNIYAALKV 395 >UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C0ZQ97_RHOE4 Length = 429 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 144/333 (43%), Gaps = 50/333 (15%) Query: 78 INLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAE---MMLEQSRLMHLLAQDSRLRE 133 + +P+R ++G + L T E E E++ TA+ M+L + +L+ L SR RE Sbjct: 111 VGMPIRYRNALLGFVWLLTSEGEVDEDQAEVLRRTADAAAMILHREQLLDEL---SRSRE 167 Query: 134 -ELVMNLIQAEENTPALTEWAQRL---GIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 EL +++ E + + A RL G+ P VV V + G Q Sbjct: 168 RELTRDVLSGERSLR--EDAANRLAEEGLLAAGPAVVVTVLLRPGD-------------Q 212 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH------------RKRVEQLITR 237 + LT ER+ L V + ++ P NS + D DH + ++ LI Sbjct: 213 STLT--ERDRLSVAVGVDQLRRRLPR-NSAIQLDRPDHSLLIVSVAERSTQTHLDSLIVA 269 Query: 238 MKEY-------GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 +E + V +G T + SY ++ + V + Y+DL Sbjct: 270 ARERVLSESGRQNIECWVGIGEPRTSVADVRESYEESRRSADVAQVVKVLGNVVRYRDLG 329 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHR 348 + LL L D N + L L + +++ L TL ++ + TS+AL +HR Sbjct: 330 VYGLLAELSEDRLENSIHSGLQSLLSHEDSKSEALLATLESFLDNAGDVKRTSEALCVHR 389 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +L YRL RI E+T DL N DDRL L+++L++ Sbjct: 390 GSLYYRLRRIQEITRADLANGDDRLALHLSLKV 422 >UniRef50_Q8RAZ7 Regulator of polyketide synthase expression n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RAZ7_THETN Length = 310 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 2/139 (1%) Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL-RG 300 + V + + G S ++Y A VGK+ E FY DL + L + R Sbjct: 120 SHFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEETLTFYDDLGIYKFLRFVDRE 179 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D +E R + N LL TL A+ +N T++ F+H NT++YRLN+I E Sbjct: 180 DILKDESIRCIYEYDKKHNTNLLE-TLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKE 238 Query: 361 LTGLDLGNFDDRLLLYVAL 379 L G D+ + + Y L Sbjct: 239 LAGEDILKDESKRFYYYLL 257 >UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR07_BACS4 Length = 559 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 20/270 (7%) Query: 130 RLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAI-----------VEVDSGQLG 177 RL++ ++ L Q E T L AQ LG DL +P + + ++V LG Sbjct: 285 RLKDNFILELAQKYSEVTTQLISKAQLLGYDLARPYLCLVGEMTHNDRKKTLKVQGESLG 344 Query: 178 VDSAMAELQQLQNALTTPERN---NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 S + LQ +T +N + E+++ A N A +E+ Sbjct: 345 SSSLQSRNYYLQKEITRAGKNLRRRTMTTFDEDEVIIFLEADNQPYMETANQFLDNIEER 404 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 + + + F + + G + SY AKT + +GKQ+ F+ D + L Sbjct: 405 LYEL--LSHITFSWGIATHKDGHYAFHNSYEEAKTALKIGKQQKGLGERTFFSDTRINRL 462 Query: 295 LDSL-RGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L ++ + D A + L L D L T + ++ T++AL +HR +L Sbjct: 463 LMAISQEDAIATIVKDTLQPLLDYDEKRQTDLIYTFIIYNKYKGNVSQTARALNLHRQSL 522 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +RL I LTGL L + DD LL ++++L Sbjct: 523 LHRLRNIESLTGLSLVDSDDLFLLELSVRL 552 >UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001972DEA Length = 391 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 4/138 (2%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL 307 +S G ++ SYR A M +G+ ES Y L + L+ SL L Sbjct: 242 LSFGTPTKKLSGLSESYREACLAMRIGRIFSRESHVVAYDRLGMGRLIYSLPMPLCRKFL 301 Query: 308 ARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 A +D L+ T+ +F ++ T++ L+IHRNTL YRL+++ +L GL+ Sbjct: 302 DEVFACAGPDELDEEALM--TIRQFFDDSLNIAETARHLYIHRNTLVYRLDKLQKLLGLN 359 Query: 366 LGNFDDRLLLYVALQLDE 383 + NF+D +LL + L + E Sbjct: 360 IRNFEDAMLLRLGLMVHE 377 >UniRef50_C2E9Z1 Putative uncharacterized protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E9Z1_9LACO Length = 529 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 41/241 (17%) Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT--PERNNLVAIVSLTEMV 210 A + GID+ + V+ IV ++S + + +++ + L E V I + + + Sbjct: 307 ASKFGIDIKKINVMWIVSINS--------IGDFKEVIDNLDEYLKECYEEVVIDHIDDHI 358 Query: 211 VL--------KPALNSFGRW-DAEDHRKRVEQLIT--RMKEYGQLRFRVSLGNYFTGPGS 259 V+ K N W D + +K++E ++ +M E Sbjct: 359 VVMCGGYKRDKAENNVCNEWLDGDFAKKQIETVVYCPKMNELADF--------------- 403 Query: 260 IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMD 318 RSYR + ++ P R F+ + ++ + RG + +N + L LK + Sbjct: 404 -GRSYRLVIMHRLALRKVFPNLR--FFSLVKCEYVVKTARGLEDDSNTSSDLLGFLKPVK 460 Query: 319 NNGLLRRTLAAWFRHNVQPL-ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYV 377 N L TL + + L TS+ LF+HRNT++YRL RISE+ G +L ++D+ Y+ Sbjct: 461 KNEELMHTLCTYLLDAQRDLQKTSELLFVHRNTVKYRLKRISEILGCNLLSYDECFAYYL 520 Query: 378 A 378 A Sbjct: 521 A 521 >UniRef50_C7TLV9 Sugar diacid utilization regulator n=2 Tax=Lactobacillus rhamnosus RepID=C7TLV9_LACRL Length = 392 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%) Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + G ++ L RLK + N L +TL +F++N TS+ +F H NT+ YRL Sbjct: 301 IEGIQESASLELTTQRLKEVLKNQDLFKTLKLFFQNNESIKKTSQQMFTHPNTIRYRLKE 360 Query: 358 ISELTGLDLGNFDDRLLLYVAL 379 I TGLD DD+ LY+A+ Sbjct: 361 IKSQTGLDYQKTDDKFRLYIAV 382 >UniRef50_B3WA77 Sugar diacid utilization regulator n=1 Tax=Lactobacillus casei BL23 RepID=B3WA77_LACCB Length = 358 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 3/113 (2%) Query: 267 AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRT 326 A ++ V K P+ + + D+ L ++++ + Q+ RLK + N L +T Sbjct: 242 ASFSIKVAKLFNPQKKLILFHDVALWSMINNAQ---QSTSTKLIPMRLKDILQNPELFKT 298 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L +F++N TS+ L+ H NT+ YRL I TGLD DD+ LYVA+ Sbjct: 299 LRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKTGLDYRKTDDKFYLYVAV 351 >UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIP6_MOOTA Length = 403 Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/308 (22%), Positives = 130/308 (42%), Gaps = 15/308 (4%) Query: 85 EGEIVGVIGLTGEPENLRKYGE-LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE 143 E + G + L E+ R Y E L M+E SR + R R E + +++ Sbjct: 94 EVTLYGYLFLLEVGEDWRPYREPLKAAALAAMIEMSRARIAQETERRYRNEFIQDILYNN 153 Query: 144 -ENTPALTEWAQRLGIDLNQPRVVAIVEVD-SGQLGVDSAMAE-LQQLQNALTTPERNNL 200 N A+ + G DL +P ++ ++ +D Q D + E +QL + + Sbjct: 154 LPNREAMVNRGRLWGWDLTRPHLLVVLSLDRQAQQERDETLWERWRQLMQYHLKHQAPEI 213 Query: 201 VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR-----FRVSLGNYFT 255 + ++++L P + + ++ ++ LI +++ F G ++ Sbjct: 214 ILADRGDQLILLIPVVTD----ELGVNKGKIAGLIKSLQKSTAAHLEGRTFSAGAGRFYE 269 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK 315 + R+Y+ AK + + + F+ +L + L+ + + L ++ Sbjct: 270 DVTDLYRAYQEAKVALEISRLLRRRGTLTFFDELGVLRLIFNQGEQELEDYYEETLGAIQ 329 Query: 316 TMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 D +N L TLAA+ + ++ +FIH NTL YRL +I EL G DL D ++ Sbjct: 330 KYDAKHNTNLMETLAAYLYASGDHNRAAEDMFIHVNTLRYRLKKIEELLGQDLRRIDVQV 389 Query: 374 LLYVALQL 381 LY ALQ+ Sbjct: 390 NLYTALQV 397 >UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32213 Length = 403 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 131/321 (40%), Gaps = 20/321 (6%) Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL-LAQDSRL 131 G+ + LPLR +G ++G + L EP+ L L L D R Sbjct: 80 GMAARVCLPLRFDGLLLGYLWLIDEPQPLDAAALAASRRCAAALAAVLAHARRLEDDERE 139 Query: 132 RE-ELVMNLIQAEENTPALTEWAQRLGID-LNQPR-VVAIVEVDSGQLGVDSAMAELQQL 188 RE LV +L+ T + E A RLG + R VAIV G D A L Sbjct: 140 REARLVRDLLL---ETGDVEEAAARLGTGAFARARGYVAIVATAEGSTVADGPAA--TDL 194 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL---- 244 + AL + VA V A + D +D ++R L+ +E QL Sbjct: 195 RLALAADQLRRSVAPRHALAAVGGGEAYLALAFDDPDDPQRRASALLDAARE--QLPDAR 252 Query: 245 --RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV-LLDSLRGD 301 V++G + S A+ + V Q +PE+ D + + L GD Sbjct: 253 DGTVLVAVGGVRATVAQLRASCTEARHALRVA-QAVPETAAPARWDALGAYRTVAELVGD 311 Query: 302 WQA-NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + L L RL + L TL A+ H A + ALF+HR++L RL+RI + Sbjct: 312 REPLGMLPSALVRLLDERDGETLLATLEAYLEHGCDAQAAAGALFLHRSSLYNRLHRIEQ 371 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 + G DL DDRL L++ ++L Sbjct: 372 IIGRDLRRGDDRLELHLGVRL 392 >UniRef50_Q035M9 Sugar diacid utilization regulator n=1 Tax=Lactobacillus casei ATCC 334 RepID=Q035M9_LACC3 Length = 184 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Query: 267 AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRT 326 A ++ V K P+ + + D+ L ++++ + + P+ RLK + N L +T Sbjct: 68 ASFSIKVAKLFNPQKKLILFHDVALWSMINNAQQSTSTKLI--PM-RLKDILQNPELFKT 124 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L +F++N TS+ L+ H NT+ YRL I TGLD DD+ LYVA+ Sbjct: 125 LRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKTGLDYRKTDDKFYLYVAV 177 >UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=Corynebacterineae RepID=A1T4Q7_MYCVP Length = 554 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%) Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-MLPVLLDSLRGDWQANELARPLARL 314 G +A SYR A+ + + + R+ + YQDL VL D D +A L L Sbjct: 415 GAQEVAGSYREARIALGIAR-RLGHTGAVSYQDLRSFTVLADVADTDQSRALVADVLGPL 473 Query: 315 KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL 374 ++ + L L + H AT++AL +HRNT+ +L+R+S TGLD+ D++ Sbjct: 474 RSAPD---LLDFLIGYLAHGGNVNATARALNVHRNTMLTKLDRVSRATGLDIRLPDNQFT 530 Query: 375 LYVALQLD 382 +++A++LD Sbjct: 531 VWLAIRLD 538 >UniRef50_UPI0001B55AAF regulatory protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55AAF Length = 522 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 41/62 (66%) Query: 323 LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 LR TL + HN Q A++ AL IHR+TL YR+ +++E G ++ + R L++ALQLD Sbjct: 445 LRHTLRTFLAHNGQSDASANALGIHRHTLRYRMGKVAEALGREVDDPAVRAELWIALQLD 504 Query: 383 EE 384 +E Sbjct: 505 DE 506 >UniRef50_C4L3L8 Putative transcriptional regulator, PucR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3L8_EXISA Length = 280 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 10/125 (8%) Query: 258 GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKT 316 GS+A YR + M + ++ Y L+ LL + D + + PL ++ Sbjct: 161 GSLAHVYRQHQLLMPYARM---STKTYPASQLLYHYLLQ--QQDLKERMHITAPLMQMLD 215 Query: 317 MDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLY 376 + LL A FRH++ T+KALF+HRNTL YRL+R+ E TG D F D LL Sbjct: 216 LSTIELLE----ALFRHSLNVSHTAKALFMHRNTLNYRLDRLFETTGYDARTFYDASLLQ 271 Query: 377 VALQL 381 + + L Sbjct: 272 LMVML 276 >UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillaceae RepID=YUKF_BACSU Length = 422 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 12/233 (5%) Query: 154 QRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLK 213 +LG+ V I+ ++ G+L + +LQ LQ TT + L+A V E+++L Sbjct: 192 HKLGMAAPSEFSVMIIRIN-GEL-TEKIEQQLQYLQE--TTQQVYVLLATVDSNELIILT 247 Query: 214 PALNSFGRWDAEDHRKRVEQLITRMKE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 D + ++ ++KE Y ++ G + ++RSY+ A + + Sbjct: 248 SPKTDHPFQDLKQFALSTQK---QLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLK 304 Query: 273 VGKQRMPESRCYF-YQDLMLPVLLDSLRGD-WQANELARPLARLKTMD--NNGLLRRTLA 328 ++ E++ F + +L + LD L QA L++L+ D + + TL Sbjct: 305 TKERFAEETKHLFSFSELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNMVETLE 364 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + + SK L IH NTL YRL RIS++ +DL N + + +Y+ ++L Sbjct: 365 RFIEADSNVNTASKLLNIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYLDIKL 417 >UniRef50_Q24Z82 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z82_DESHY Length = 512 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 7/142 (4%) Query: 235 ITRMKEYGQLR----FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 IT++K + + + ++ + F P + +Y G + + Y+D M Sbjct: 348 ITQIKPFLESKIIDGWKSCISFTFPSPCDLKNAYLQCLAAATFGCSLQSRNMIFDYKDYM 407 Query: 291 LPVLLDSLRGDWQANELARPLAR-LKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIH 347 LL + + PLAR + D +N +TL + R++ SK L +H Sbjct: 408 GYHLLSKAATYFNTTDFCLPLAREIMKFDIAHNTQYAKTLHHYLRNHKNINIVSKNLHLH 467 Query: 348 RNTLEYRLNRISELTGLDLGNF 369 RNT+ YRL R+ EL GLDL +F Sbjct: 468 RNTVVYRLERLKELFGLDLDDF 489 >UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZ25_CATAD Length = 383 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 30/317 (9%) Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 HGV + LP R G G + L +L + A M E SR LLAQ +R+ Sbjct: 84 HGVLPRVCLPARWNGVTYGYVWLLDVDGHLDD-----ALLASAMHEASRAGALLAQQARV 138 Query: 132 RE---ELVMNLIQAEENTPALTEWAQRLGIDL---NQPRVVAIVEVDSGQLGVDSAMAEL 185 RE E + NL+ + A+ E A DL ++ R + +V +++ S L Sbjct: 139 RERMEERLQNLLSPDR---AVAEQAAEEISDLGLVDRDRKITVVVLETRNQDWQSVPLNL 195 Query: 186 QQL-QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +L ++ L PE +++ +V V A+ + +E R++ + Sbjct: 196 WRLPRSVLAAPETDHISLLVPEPHSV-------------ADIAERALELYRERLESDARK 242 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 V +G S+R A+ + VG+ + DL + LL Sbjct: 243 DVLVGIGAPREDLAEARASWREARLAVRVGRAVPTFRPTAVWADLGIYRLLACGPQRELR 302 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + + P R + ++ LL T+ + H T+ AL IHR TL +RL +I +TGL Sbjct: 303 DAVVDPAVR-RLLEEPDLLI-TVQTYLDHAGSAQQTAAALSIHRQTLYHRLEKIERITGL 360 Query: 365 DLGNFDDRLLLYVALQL 381 DL + DRL L++ + L Sbjct: 361 DLADGRDRLRLHLGVSL 377 >UniRef50_UPI0001B53A83 CdaR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B53A83 Length = 527 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 40/68 (58%) Query: 311 LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 LA L+ D +G L RTL + A AL +HRNT+ R+ RI+EL DLG+ D Sbjct: 448 LAPLEEADPSGGLVRTLRCYLDFQSSAKAAGAALGVHRNTVMQRMERIAELLPADLGDPD 507 Query: 371 DRLLLYVA 378 DRL +++A Sbjct: 508 DRLAVHLA 515 >UniRef50_Q2B9V6 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B9V6_9BACI Length = 298 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 9/145 (6%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ V LG +F + + K + MP R ++ L+ ++ + Sbjct: 159 VKMYVYLGKFFPAGDQLRGGFEEEKDFFGRALRLMPHERVLTFEKAFPSCLVAEMKPSLR 218 Query: 304 AN---ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + +L P A + L T+ A+ + ++K L+IHRNTL+YRL++ SE Sbjct: 219 ESLDTQLLGPAA------EDSELLATIKAFLENGSNATLSAKKLYIHRNTLQYRLDKFSE 272 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 TG++L +F++ + +Y+A L +++ Sbjct: 273 KTGVNLKDFNNAVTVYLACLLKDQQ 297 >UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VVQ4_9BACI Length = 419 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 147/350 (42%), Gaps = 42/350 (12%) Query: 60 VVDIDDAVA--RHLHGVRQGINLPLRLEGEIVGV-----IGLTGEPENLRKYGELVCMTA 112 V+D + A+ R L Q + L+ EI G IG+T Y ++ +T Sbjct: 72 VIDGEPAIILDRRLQYQWQAVRFDLKSNDEICGYLFVDEIGMTNFI-----YEQIKSITG 126 Query: 113 EM----MLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVA 167 ++ + E + LL Q R + + +L+ ++ L A+ DL+ P +V Sbjct: 127 DLSFAVLAELKKNKELLHQGRRWKYAFLFDLLYGNIKDEQTLNAHAKTWEWDLSVPHMVL 186 Query: 168 IVEV-DSGQLGVDSAMAE----------LQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 ++ + QL D + E ++ L N + +R+ L+ + + + K Sbjct: 187 SFQLQNYDQLLGDEVLLEKIQRTWELFLMRHLINPMILQKRDELIVCLPVDSNI--KDLK 244 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK 275 NS ++RV QL+T Q F + G + + RSY+ AK +G Sbjct: 245 NSIKV------KERVNQLLTSAATILNQRDFYIGAGRAYHQGIELYRSYQEAKMARNIGI 298 Query: 276 QRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMDNN--GLLRRTLAAWFR 332 E +F+ ++ +L R + +E + + L D++ L++ L + Sbjct: 299 HETGEKLSFFHDIGLMKLLYSHDRS--ELHEFYKDTMGELLNHDDDTEAELKKALRTYIE 356 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 ++ T+ +LF+H+NT+ YRL +I +L +DL + + VA ++ Sbjct: 357 QDLDISRTAHSLFVHKNTVRYRLKKIEDLLHVDLSDLSVIMDFAVAFHIE 406 >UniRef50_A4JMN4 Transcriptional regulator, CdaR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMN4_BURVG Length = 418 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 11/254 (4%) Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRV---VAIVEVDSGQLGVDSAMAELQQ 187 LR +L + + A + + LG+D PR+ +A +D + D A+ ++ Q Sbjct: 164 LRYQLHDVVFSRSRDDDAFRKITKALGLDHAVPRIAVALASSALDGEPIQADRALDQIVQ 223 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 + + R+ LV +V+ P++ A +RV + + ++E Sbjct: 224 VTAGILKTSRDTLVDARHHDRLVIWVPSIQQES---ASASDRRVAEYMATLQERLPSVTS 280 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL 307 + +G G A S A + G + P+ + + Y D+ V+ + +RG+ A L Sbjct: 281 IGIGLAGVGAQGWAASADEAIRALDFGNRFAPDQKVHRYSDI---VIEECIRGNDSA--L 335 Query: 308 ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 L+ L + RT+ A+F + + T+ AL IH NTL++RL R+ + G L Sbjct: 336 NYFLSLLNELSVESGATRTIEAFFTNRRRRKVTAAALDIHPNTLDHRLERVESILGAKLD 395 Query: 368 NFDDRLLLYVALQL 381 + L +AL+L Sbjct: 396 DARWIAKLEIALKL 409 >UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQF7_DESHD Length = 562 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 74/145 (51%), Gaps = 5/145 (3%) Query: 228 RKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ-RMPESRCYF 285 ++ VE + + K++G+ +F + +G + P + +S++ AKT + V K+ ++ Sbjct: 396 KEAVEHALAELAKQFGEDKFSIGIGGAYPQPELVEKSFKEAKTALSVAKKCKIRRGNVLL 455 Query: 286 YQDLMLPVLLDSLRGDWQANELARPLA-RLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 ++++ + ++ ++ + E L LK D N+ +L TL + + T+K Sbjct: 456 FEEIGIHRIIFMVQDTAKIREFCDDLLLELKKYDEKNSDVLLETLHEFLLCDCVVKETAK 515 Query: 343 ALFIHRNTLEYRLNRISELTGLDLG 367 +F+H NT+ YR+ +I +L DL Sbjct: 516 KMFVHPNTVTYRIKKIKQLLKHDLA 540 >UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBB0_BREBN Length = 514 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 N L PL R T N LL TL + N L TS+AL+IHR+TL+YRL +I E TG Sbjct: 427 NPLLEPLIRYDTKYNQQLLE-TLEVYLAQNGNGLQTSQALYIHRHTLKYRLTQIEEKTGY 485 Query: 365 DLGNFDDRLLLYVAL 379 L + R L +AL Sbjct: 486 RLEDAHQRWQLQLAL 500 >UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus RepID=D2LXZ9_BACS4 Length = 538 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 8/151 (5%) Query: 224 AEDHRKRVEQLITRMKEYGQLRFRVS-----LGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 A++ ++R+ R+ + R R+S +G Y + +SY TAK T+++ + Sbjct: 355 ADNWKERMMAAFNRLNKDSSGRIRMSNVSIGVGKYVHALCDMHKSYETAKETLLLQESLT 414 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMDN--NGLLRRTLAAWFRHNV 335 E+ YFY DL + ++ + E+ L + D NG L +TL + N Sbjct: 415 KENSSYFYDDLHMYRIIALTKKHSNLTEIVNDYLEPVIAYDRKYNGDLLKTLKTYLSCNG 474 Query: 336 QPLATSKALFIHRNTLEYRLNRISELTGLDL 366 T+K LFI R TL +R++++ L G D Sbjct: 475 SKQETAKKLFIVRQTLYHRIDKLENLLGNDF 505 >UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TND5_9BACT Length = 538 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 25/322 (7%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMT----AEMMLEQSRLMHLLAQDSRLREELVM 137 + L G++ G + + E+L + + +T A ++ Q R+ + A+ SR R E V Sbjct: 210 ISLNGKVYGYLLFDCKQEDLAERNCEIPITQAKGAILLYMQRRVAEIQAE-SRYRNEFVQ 268 Query: 138 N-LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE 196 + LI + A+ G DL V ++++D+ + + E L +T + Sbjct: 269 DILIHNLRFEGEVWNRAKMFGWDLQGSHCVVVMDIDNYKHQFEKRSRERDFLPMLESTKK 328 Query: 197 R---------NNLVAIVSLTEMV----VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 R + L V TEM + P F + A+ + T +KE Sbjct: 329 RIYRICKNHVHGLFESVPYTEMSDSISFILPTEEGFPAFKAKT-TPLFRDIQTSIKEDTH 387 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL----MLPVLLDSLR 299 + +G+ SY A+ + + + +R F++DL +L L D+ Sbjct: 388 FTVTIGIGSPKDSVFECHHSYDEARKALEMVRAATGGNRVTFWKDLGAYKILGSLYDTDT 447 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 G E P+ + LLR TL A R+N Q A +K L +H +TL+YR +I Sbjct: 448 GHSFYREYIGPIIDHDKRRKSELLR-TLKAMVRNNWQMKAAAKDLSVHYSTLKYRYAKIC 506 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 +L D + + RL L ++L+L Sbjct: 507 DLLEFDPEDSEQRLNLALSLKL 528 >UniRef50_C4IDD0 Transcriptional regulator, PucR family n=3 Tax=Clostridium RepID=C4IDD0_CLOBU Length = 314 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 21/206 (10%) Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV-EQLITR 237 D + ++ L N + E + I + E V+L L SF + ++H + E L T Sbjct: 120 DKSEEAVEILNNVYSDTE----ILIFTFKEYVIL---LGSFE--NIQEHTCSIYETLYTS 170 Query: 238 --MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 MK Y V + +Y S+ +++ + + + + + + LM ++ Sbjct: 171 IYMKCYMSY---VEISDY----VSLKKNFDLCRYKLNLAHKYHVSGKVFNMDSLMFESII 223 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 D+L D + +A+ + +DN+ + +++ +F N+ SK L++HRNTL YRL Sbjct: 224 DNLNEDEKNRIIAKFNEGFERLDNDII--QSIDVFFELNLNLSEASKKLYVHRNTLIYRL 281 Query: 356 NRISELTGLDLGNFDDRLLLYVALQL 381 ++I + T D+ F++ ++ VA + Sbjct: 282 DKIQKCTSYDIRKFNEAVIFKVAFAI 307 >UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3R2_PAESJ Length = 559 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 12/168 (7%) Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK--QRMP 279 WD +++ L R+ E L + +G T I SY A + G +R Sbjct: 384 WDESIFIQQLAGLSDRLNEEIGLSLSIGIGKPATNALGIRHSYEEAIKALQYGYRLKRTK 443 Query: 280 ESRCYFYQDL-----MLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHN 334 + Y +D+ MLP D LR ++ E + + + LLR TL+A++ Sbjct: 444 FVQSYQSKDIGYLFHMLPH--DELRQFYE--ETFYGIRHTEEQERKELLR-TLSAFYDTQ 498 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 Q + TSK LF+HRNT+ YRL++ +L G+ L + + L L +AL ++ Sbjct: 499 CQLMETSKLLFVHRNTVVYRLDKCEKLLGVKLKDPIESLRLRIALSVE 546 >UniRef50_D2QA67 Purine catabolism regulatory protein n=3 Tax=Bifidobacterium RepID=D2QA67_9BIFI Length = 387 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-----MLPVLLDSLRGDW 302 + +G +++S+R A + + + ++ E R F+ DL +L + + ++ Sbjct: 247 IGVGKLTKSIRCVSKSHRQAASILKLQSRKKLEDRINFFDDLGAYRVLLGIEDPEISREY 306 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L PL ++ LL L + HN T+ LF+HRNT+ Y++++ +E+ Sbjct: 307 HTQILG-PLIEYDKESDSDLLD-VLRCYLNHNDSVKETADELFVHRNTVNYKISKAAEIL 364 Query: 363 GLDLGNFDDRLLLYVALQL 381 +DL D RL L +A L Sbjct: 365 CMDLSKLDSRLQLLLAFML 383 >UniRef50_B6W8M0 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W8M0_9FIRM Length = 382 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%) Query: 320 NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 N L +TL ++ +N+ S+ALFIH NTL YRLN+I E+ F D L+L++ Sbjct: 307 NKDLYQTLHTYYDYNLNIKKASEALFIHENTLRYRLNKIEEICSYSPYKFKDNLILFINY 366 Query: 380 QLDE 383 L++ Sbjct: 367 LLNK 370 >UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G898_9FIRM Length = 315 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 15/250 (6%) Query: 135 LVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT 194 ++NL+ ++E A RL I +PR + ++E +D + E+ L+ Sbjct: 65 FLLNLMTGTAQDCEISERAARLHIRAVKPRYLFLLESSKK---MDETVTEV--LKQLFPF 119 Query: 195 PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYF 254 E+ LV + ++ +L P + +ED +I + +++ + Sbjct: 120 QEKIYLVPVNEF-QLAMLYPVKDG---CTSEDIHDLAHTMIDTLSMEALTHVQIAYSDLI 175 Query: 255 TGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARL 314 ++ +Y+ + VGK E + + L + L+ L + L + Sbjct: 176 PDLHALPSAYKQTALALRVGKLFYSEQSVFPFNKLGIGRLIHELPEKLCEDFLFEIFGGI 235 Query: 315 KTMDNNGLLRRTLAA---WFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 + L + TLAA +F++N+ T++ L +HRNTL YRL ++ + TGLDL F+D Sbjct: 236 TS---EHLDKDTLAAIDKFFQNNLNIAETARQLHMHRNTLIYRLEQVEKRTGLDLRQFED 292 Query: 372 RLLLYVALQL 381 + +A+ + Sbjct: 293 AMTFKIAIMI 302 >UniRef50_C6D0D7 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0D7_PAESJ Length = 524 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 40/63 (63%) Query: 323 LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 L T+ +F++N TS L H NT+ YR+ R+ EL G+++ + DD L LY+A++L+ Sbjct: 458 LHETIRVYFKYNRNVKKTSAELITHYNTVSYRVERVCELLGINVDDGDDILQLYLAVKLN 517 Query: 383 EER 385 E R Sbjct: 518 EMR 520 >UniRef50_D2B363 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B363_STRRD Length = 501 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 27/282 (9%) Query: 110 MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVV--A 167 + A + LE++R+ + RL E+L+ A + L + GI +P V A Sbjct: 234 LAACVALERTRMEEGRRVERRLAEQLIALACSAGSDPAELNAGLRTCGIGPAEPYSVVNA 293 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 V G D A Q L+ L R +VA V L P + G AE Sbjct: 294 TVTRPGAARGPDPARLGGQVLEELL----RPRVVAAAGADGAVALVPLSGTAGEL-AETL 348 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSI---------ARSYRTAKTTMVVGKQRM 278 R+ L + +R + + TGP +I AR A+ VV + Sbjct: 349 REGARALAAGLP---GIRVSIGVSAALTGPSAIRGGAEEAGHARRLAEARGGGVVTSDEI 405 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPL 338 + L+L + D +R + A L PL N+ L+R TL + Sbjct: 406 ------YTHALLLATVPDDVRRSFAARTL-DPLFDYDRRHNSDLVR-TLGTFLDCVGSWN 457 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 A ++ L +H NT+ YR+ R+ ELTG DL DR+ L++AL+ Sbjct: 458 ACAERLHVHVNTVRYRIRRVEELTGRDLATMADRVDLFLALR 499 >UniRef50_A0QZJ2 GAF domain protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QZJ2_MYCS2 Length = 595 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 63/328 (19%) Query: 80 LPLRLEGEIVG---VIGLTGEPENLRKYGELVCMTAEMM-LEQSRLMHLLAQDSRLREEL 135 +P+ L GE+ G VI EP+ R+ L+ A ++ LE + H++ RL +L Sbjct: 292 IPIVLSGEVAGWLWVITEPSEPDAGRQ--RLIEHFALVVGLEILKQRHIVEVQERLCGDL 349 Query: 136 VMNLIQAEENTPA--LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT 193 +++L++ + P+ L + A+ LG DL P +A+ +G+ G +L Q+ ALT Sbjct: 350 MVDLLRTSDVPPSTMLIQRAEALGHDLTTPHWLAVF---AGEFG-----PKLDQV--ALT 399 Query: 194 ----TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY-GQLRFRV 248 P + LV + + + +V+L P D + V++ +TR+ E G R V Sbjct: 400 VREAAPRQETLVGVYA-SSVVMLIPC--------DRDPLRIVQRTLTRITESSGGGRLAV 450 Query: 249 SLG-----------NYFTGPGSIARSYRTAKTTMVVGK------QRMPESRCYFYQDLML 291 +L NY TG RT + + G +R+P + + Sbjct: 451 ALSPPVERLADYPVNYQTG-------VRTTQLRLAAGAGGLVDLRRVPLTSLLLLN-STV 502 Query: 292 PVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 P D LR A L PL L+ TL W AT L +H NT+ Sbjct: 503 P---DQLRR--FAENLIEPLESHDEQRETDLVA-TLRTWLVEGFSAAATGNRLTVHVNTV 556 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVAL 379 YRL +I L GLDL D RL L +A+ Sbjct: 557 GYRLAKIQSLLGLDLRKADVRLELQLAV 584 >UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N1Y2_CLOK5 Length = 410 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 12/186 (6%) Query: 201 VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK-EYGQLRFRVSLGNYFTGPGS 259 + I+ T +V++ P +++ + E++++ + + +L+ + +G+++T Sbjct: 224 INIIEDTFIVIMFPV----EKYERDKINSIAEEILSNINSKIEELKISIGIGSFWTRLEE 279 Query: 260 IARSYRTAKTTM-VVGKQRMPESRCYFYQDL-MLPVLLDSLRGDWQANELARPLARLKTM 317 + S A+ + ++G + ++ Y+D+ M +L D + D L L L Sbjct: 280 LKDSVNKAQNALKILGGNK---NKVCSYKDMGMYRLLFDMSKKDEMKRLLREILGELMEY 336 Query: 318 D--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLL 375 D N+ L TL + N + T++ LFIH+NTL+YR+ RI E+ +L N + Sbjct: 337 DSKNSTSLVETLKVYINENCNLIHTAEELFIHKNTLKYRIKRIEEILNCNLRNMEHLFRF 396 Query: 376 YVALQL 381 +A ++ Sbjct: 397 DMAFKI 402 >UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C179_9CLOT Length = 538 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 4/117 (3%) Query: 257 PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP--VLLDSLRGDWQANELARPLARL 314 PG I R+Y+ A+ + +G++ + + + Y L +L ++ Q + R L Sbjct: 409 PG-IKRAYQEAEKAVDIGEKLGMKEQVFAYNQLEFYDYLLQYPVKTKEQCCDSIRCLQEY 467 Query: 315 KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 +NN L TL + H T+KAL+IHRNTL RLN+I EL DL DD Sbjct: 468 DE-ENNTELVHTLLGFLEHKFNVSETAKALYIHRNTLINRLNKIKELLYNDLETMDD 523 >UniRef50_UPI0001B54B4D hypothetical protein StAA4_23505 n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54B4D Length = 389 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 3/149 (2%) Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 E L+ +++ + R + + + G R+ R A+ +V + + + + Sbjct: 238 EPLVALLRQIAKAR--IGMSQPYRAIGETPRAVRLARIALVSAPEGSKQVSAFRAGRVAG 295 Query: 292 PVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 V G A + P+ L D LL T+ AWF ++ T K L HRNT+ Sbjct: 296 LVAHAPAEGVRVAQAVLGPILELPAEDRETLLA-TIRAWFDNDGSAERTGKQLHCHRNTV 354 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQ 380 YRL R+ ELTG N D L VAL+ Sbjct: 355 RYRLRRVQELTGHSFANPADIAELAVALE 383 >UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=Lactobacillales RepID=C0WN27_LACBU Length = 566 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 2/142 (1%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + + GN + +I+ S+ AK+T+ KQ Y L L + + Sbjct: 417 INLTFAFGNPYKSIENISSSFIEAKSTLDEAKQLYDPDIVNHYHPKGLVGLFEDTNEENI 476 Query: 304 ANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + L L + G+ L++TL + +N + T+ AL++HRNT++YR+ + ++ Sbjct: 477 HYFCEKILKELAYPEEAGVKDLKKTLKVYLDYNCEITKTATALYLHRNTIKYRIKQCEKI 536 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 G+ + N + L L +AL+L E Sbjct: 537 LGMSVKNPQNSLNLRLALELSE 558 >UniRef50_D2S8H6 Transcriptional regulator, CdaR n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8H6_9ACTO Length = 405 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 12/258 (4%) Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 ++ R E V +L+ L E A+ G+ LN VV + E GQ +DS Sbjct: 139 REEEFRLEFVDDLLAGLAPVGLLIERAEFFGLQLNGAHVVVVAE---GQRPIDSGSGVRG 195 Query: 187 QLQNALTT--PERNNLVAIVSLTEMVVLKPALNSFGRWD-AEDHRKRVEQLITRMKEYGQ 243 ++AL +R L A + + VL ++ G D V L++R G Sbjct: 196 VAEDALRARFGDRGLLAAAKNGRLVCVLSCPRDADGCADLGRQVAGIVGPLVSRTARGGP 255 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 +R G TGP + RSY+ A + + + DL++ +L R + Sbjct: 256 --WRAGAGRPHTGPRGVQRSYQEAVEALETASRLSLRQQVVQAADLLVYRVLA--RDETA 311 Query: 304 ANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 ++L + T G L TL A+F T++ L + + YRL R+ EL Sbjct: 312 LSDLVHTVLEPLTGARGGAAPLVETLEAYFSAGRNAAETARRLHLSVRAVTYRLQRVREL 371 Query: 362 TGLDLGNFDDRLLLYVAL 379 TG D G D L L VA+ Sbjct: 372 TGYDAGEPDHHLPLLVAV 389 >UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID=Q9KDY9_BACHD Length = 403 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 5/134 (3%) Query: 250 LGNYFTGPGSIARSYRTA-KTTMVVGKQRMPESRCYFYQDL-MLPVLLDSLRGDWQANEL 307 +G + + ++ S+ A K + G+ + Y++ +L +++DS+ +E Sbjct: 265 VGQHCSQLTDVSESFHQAEKVIELKGEFAYELDKVYYFHELGFYRIIVDSV--PILESET 322 Query: 308 ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 + LA LL+ TL A+ + + A + L +H NTL YR+ RI ELTGLD+ Sbjct: 323 VQTLAAYDQKQGTELLQ-TLEAFLDVDGRNQAAAALLHVHPNTLNYRMKRIYELTGLDVK 381 Query: 368 NFDDRLLLYVALQL 381 N D++ LY+ L+L Sbjct: 382 NMKDKVSLYLELKL 395 >UniRef50_B1YK79 Putative transcriptional regulator, PucR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YK79_EXIS2 Length = 277 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 39/56 (69%) Query: 324 RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 R T+ A+ R N+ T+K LF+HRN+L+YRL+R++E T +D+ +F+ + LY L Sbjct: 219 RETIDAFCRANLNVSLTAKHLFLHRNSLQYRLDRLTEQTEIDIRSFEGAMFLYTLL 274 >UniRef50_D2AXV2 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXV2_STRRD Length = 514 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 21/293 (7%) Query: 99 ENLRKYGE----LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ 154 E +R GE +V + A + LE+SRL + R+ ++L+ L + N P + Sbjct: 232 EQVRAGGEHEDLIVELAALVALERSRLEAAQRIERRVLDQLLGLLTSGDANLPGVVSRLH 291 Query: 155 RLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKP 214 L I+ + + V+ + +A L +L L VA E V L P Sbjct: 292 TLHIETEDGLLAVALAVEGTDRADEVGVAVLDELLRPLAPG-----VATAVGGEAVALVP 346 Query: 215 ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPG---SIARSYRTAKTTM 271 G AE + T G R + + + TGP S+ R A+T Sbjct: 347 L---AGNSAAELTSHMLAGAATLEAGLGDARITIGVSSVTTGPAALSSLIEEARHARTLA 403 Query: 272 VVGKQRMPESRCYFYQDLMLP-VLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLA 328 +G+ R+ D+ L+ ++ G+ + + R L RL+ D + L TL Sbjct: 404 ELGEGRV---SAITGDDVSSHRSLIAAIPGELRRSFRTRLLGRLEEYDAAHQTELVETLE 460 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + + AT+ L +H NTL YR+ RI ELTG L D+R+ +AL++ Sbjct: 461 TFLEESGSWAATADRLHVHVNTLRYRVKRIEELTGRSLNALDERVDFLLALRM 513 >UniRef50_C4RL84 Transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RL84_9ACTO Length = 358 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%) Query: 326 TLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 TL A+ N +++L +H NTL YR+ +I LTG DLG F+DR+ L++AL+L E Sbjct: 259 TLNAFLSANGAWRRCAESLHVHVNTLRYRIGQIERLTGCDLGRFEDRVDLFLALRLREP 317 >UniRef50_A6BK23 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BK23_9FIRM Length = 379 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD----SLRGDWQ 303 V +G + I RSY TA T + K +P++ + + + +L D SL D+ Sbjct: 236 VGIGTTVSQLTDIHRSYETAFTAYQLTKTALPKNFLEYDKLGVYKLLADIHNQSLTADFL 295 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + L P+ + + L L +F H+ + T+ AL+ H+NTL Y+LN+I EL Sbjct: 296 NSTLG-PILDYDAVHHTDYLH-ILEVYFDHDCSIIHTADALYCHKNTLSYKLNKIKELLD 353 Query: 364 LDL 366 D+ Sbjct: 354 YDI 356 >UniRef50_C6LBU3 Putative uncharacterized protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LBU3_9FIRM Length = 285 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%) Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + FR + + FT YR + + G PE Y + D +LP +L+ G++ Sbjct: 139 MNFRAGISDAFTDIFQSHTHYRQSLAMLKTGFSSQPERLIYPFGDFILPYMLEHCVGEFD 198 Query: 304 ANEL-ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + + L LK +D TL + + T++ L++HR+TL+ RL +I L Sbjct: 199 KDMIFTEGLRALKELDTGVDYWDTLKRYLDNECNASKTAQELYLHRSTLQPRLEKIRTLA 258 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 +D + RL L + + L+E Sbjct: 259 DMDTP--EGRLYLRICIYLEE 277 >UniRef50_Q5YWM3 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YWM3_NOCFA Length = 418 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 41/198 (20%) Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +L+++Q+ L T ++A++S T +L P E HR +L+ + + + Sbjct: 225 KLRRVQSGLATAFDAQVLALLSPTGGTLLVP--------HGEQHRPFTAELLAVLGKAAE 276 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + + T + R+PES ++ L L L G ++ Sbjct: 277 VPL--------------------SATVVTAATDRIPESAEQAHELLELAQLAGRGPGLYE 316 Query: 304 ANELA--------RPLAR-----LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 +LA P R L+ +D + L T+ A+ R+++ T++ LF+H NT Sbjct: 317 MADLAVEYQLTRGGPATRQVAGLLEPLDAHPELSDTMRAYLRNDMNRRMTARQLFVHPNT 376 Query: 351 LEYRLNRISELTGLDLGN 368 ++YRL RI++LTG+DL Sbjct: 377 VDYRLRRIAQLTGIDLAT 394 >UniRef50_Q8CUH2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8CUH2_OCEIH Length = 298 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%) Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 +G Y +I+ T Q YF +D ++ D +L+ Sbjct: 165 IGPYLCNLNTISEYVELLATQAFSSLQHHDSPVVYFIEDYPFQLIKQLEVQD--KKQLSN 222 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 + + T D + L T+ + N+ TSK L++HRN+++YRL++ E TG+D+ F Sbjct: 223 WILKEFTEDEDAL--ETIQTFIECNLNLSETSKKLYMHRNSIQYRLDKFHESTGIDVKQF 280 Query: 370 DDRLLLYVAL 379 D + +Y+A+ Sbjct: 281 DQAITVYLAI 290 >UniRef50_A4F965 Regulatory protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F965_SACEN Length = 509 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Query: 293 VLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 VLL S+ + + + AR L+RL D +N L TL + + ++K L +H NT Sbjct: 414 VLLASVPDELRRSYRARLLSRLTEYDRVHNSDLVHTLRVFLDTSGSWSRSAKQLHVHVNT 473 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 L YR+ RI E++G DL +F R+ Y+AL LD Sbjct: 474 LRYRIQRIEEISGRDLSDFPTRVDFYLALVLD 505 >UniRef50_UPI0001C3671A transcriptional regulator, CdaR n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3671A Length = 424 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 13/147 (8%) Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ-RMPES-RCYF----YQDLMLPVLL 295 + R+ + + G +IA S+ + ++ V KQ +P S YF Y L +P L Sbjct: 269 SRFSLRIGISSAHFGVETIAVSFEESFKSIKVQKQLNLPGSASSYFEQSIYHILNIPELK 328 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 D + + ++ PL ++ TL +F ++ T+KAL+IHRNTL YRL Sbjct: 329 DFRK---LSRDIISPLIEYDAANDTNFFE-TLQQYFHNSFNIQKTAKALYIHRNTLSYRL 384 Query: 356 NRISELTGLDLG---NFDDRLLLYVAL 379 I EL D N D LY+ + Sbjct: 385 QHIKELLKFDFDFEHNTDALFTLYLCI 411 >UniRef50_A6TL32 Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TL32_ALKMQ Length = 283 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 7/113 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV--VDI 63 +D AQ ++ + + N + +G II + ER+G +HEGA ++S G++ + I Sbjct: 4 IDPIFAQKLMKLIQKETNQNAHFFGEKGIIIATTQPERLGTIHEGAKDIMS-GKIDFIAI 62 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML 116 + + L G R G ++ + E + +G IG++G P ++R + M A M+ Sbjct: 63 TEEMTMQLSGTRPGFSVAIDTENQRIGAIGISGNPTDMRP----IAMIASHMI 111 >UniRef50_B9DTC0 Leucine-rich protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DTC0_STRU0 Length = 282 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 65/233 (27%) Query: 173 SGQLGVDSAMAELQQLQNALTTPERNNLVAIVSL--TEMVVLKPALNSFGRWDAEDHRKR 230 S QL + S M EL L++ P+ AI+SL T+ V L +SFG+ Sbjct: 88 SHQLPIPSEMVEL--LESIFGQPK-----AILSLSQTQTVFLLTRSDSFGQ------IAL 134 Query: 231 VEQLITRMKEYGQLRFRVSLGN------------YFTGPGSIARSYRTAKT--TMVVGKQ 276 ++ ++ ++ L R+ +GN YF G++ +YRT + T+++ + Sbjct: 135 IKDILPTLENDFGLALRLFIGNHWSSLTANQLRDYFLEEGALYDAYRTQNSDETLILYSK 194 Query: 277 ---------RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL 327 +P++ C++YQ + L + EL L D++G L Sbjct: 195 ILLWALNADHIPKAICHYYQMV--------LGNQKETRELVEAL-----WDSHGNL---- 237 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 + T+++L+IHRN+L+Y+L+++ TGL L DD Y+ LQ Sbjct: 238 ----------VQTAQSLYIHRNSLQYKLDKVYRQTGLQLKQLDDLAFAYLFLQ 280 >UniRef50_C6J1N7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1N7_9BACL Length = 381 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 1/136 (0%) Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 F +++G+ + + + T+ +G+ + +F +L L L+ S+ + Q Sbjct: 240 FHLTVGSALIAETELVSATLFLRQTLALGRMFNVTAPIHFPWELRLERLVYSIPEE-QRR 298 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 + A L + + +R TL +F + T+K L+IHRNTL YR+++ + TGLD Sbjct: 299 QFALELGDRADLLQDEEIRTTLETFFALDCNVSETAKRLYIHRNTLLYRIDKFKQETGLD 358 Query: 366 LGNFDDRLLLYVALQL 381 + F+D +L+ + L L Sbjct: 359 VRTFNDAVLVKLELLL 374 >UniRef50_Q5WAP5 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAP5_BACSK Length = 536 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%) Query: 323 LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L RTL+ + HN Q T+K + IHRNT+ YR+ + EL G DL D+ L L +A Sbjct: 467 LARTLSIYINHNCQVAETAKVMAIHRNTVIYRIKKCEELLGCDLKKPDETLRLRIAF 523 >UniRef50_C5RLK5 Putative transcriptional regulator, PucR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLK5_CLOCL Length = 313 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 22/214 (10%) Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 V I++VD + + + E+ + Q+ ++ + + +VL D E Sbjct: 114 VMIIDVDGNKYDALTVIKEIYKEQDVIS----------IIFGDHIVLMGIFE-----DIE 158 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 +H + + I Y +S + + ++Y K +++ + + Sbjct: 159 EHASSIIESIEADIYYDSC---ISYSDTIYKAKEVKKAYENCKECLMLKSRYSIKQNILS 215 Query: 286 YQDLMLPVLLDSLRGDWQANELARPLA-RLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 Y L+L L+ ++ D + NEL L + + D L T+ + + + ++ L Sbjct: 216 YNKLLLEKLVYFIKDDLK-NELKEKLEDKFNSFDEEML--TTIEEFINYGLNISDAARRL 272 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 +IHRNTL YRL++I TG D+ NF + L +A Sbjct: 273 YIHRNTLIYRLDKIKRETGYDIRNFKEATLFIIA 306 >UniRef50_C9AUB5 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AUB5_ENTCA Length = 543 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 12/170 (7%) Query: 221 RWDA-EDHRKRVEQLITRMKEYGQLRFRVSLG--NYFTGPGSIARSYRTAKTTMVVGKQR 277 + DA EDH +T +L FR++ G + +A SY AKT + + Sbjct: 378 KCDALEDHLIETANALT-----NRLPFRMAFGVGSVCESINDLASSYIEAKTAYEERRGQ 432 Query: 278 MPESRCYFYQDLMLPVLLDSLRGD---WQANELARPLARLKTMDNNGLLRRTLAAWFRHN 334 S FY + L + + + + + + LA D LR+TL A+ + Sbjct: 433 PDSSIVSFYHQRGMRSLFEKMSPEDIHYFCRTILKELA-FPQEDATIELRKTLRAYLDYQ 491 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 + T+KALF+HRNT++YR+ + +L G ++ + L L +AL+L EE Sbjct: 492 CEITRTAKALFVHRNTIKYRIEQCQKLLGKNVHDPSISLDLRLALELSEE 541 >UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT1_9FIRM Length = 362 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 32/292 (10%) Query: 96 GEPENLRKYGEL-VCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ 154 G+ E+ GEL VC + L+ A+ S + + NL+ + A+ Sbjct: 81 GKAESTATIGELAVC-------QVQSLLAAYAEKSD-KNTFMQNLLLGSYSDVDAFNCAK 132 Query: 155 RLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKP 214 +L I + R V +VE + Q ++A+A ++ + +A T + + + T +++++ Sbjct: 133 KLHIATSVQRAVFLVE--TKQTKDENALATIRNIFSART----RDFITAIDDTGIIIIRE 186 Query: 215 ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG 274 L S + ED L+ + V+ N + +Y+ A T + VG Sbjct: 187 -LQSTETY--EDLESIAYMLVDMLNTEAMTSAWVAYSNLAEDISRLPDAYKEAHTALEVG 243 Query: 275 KQRMPESRCYFYQDL-------MLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL 327 K + + Y L LPV + + D E L ++D L+ T+ Sbjct: 244 KIFYADKNVFGYNQLGIGRLIYQLPVSICEMFIDEIFKE-----ETLDSIDEETLI--TI 296 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 +F +N+ TS+ L++HRNTL YR ++ GLD+ F+D L +A+ Sbjct: 297 RTFFENNLNLSETSRQLYVHRNTLVYRFEKLQRKFGLDIRAFEDALTFKLAM 348 >UniRef50_B5GDD1 Regulatory protein n=2 Tax=Streptomyces RepID=B5GDD1_9ACTO Length = 386 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%) Query: 237 RMKEYGQLRFRVSLG------NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF-YQDL 289 R ++ G R S G + +GP + A +Y+ A+ + V ++R R ++D+ Sbjct: 228 RARDAGTGRTHTSDGALVMGLSAPSGPVAAATAYKQAEQALSVARRR---GRTLVEHEDV 284 Query: 290 ----MLPVLLD-SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 +LP+L D ++R A+ L R L R G L +L AW H+ Q A + L Sbjct: 285 AAGSVLPLLADDAVRA--FADGLLRAL-RDHDATGRGDLVASLRAWLAHHGQWDAAAAEL 341 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 +HR+TL YR+ R+ E+ G L + D R+ L++AL+ Sbjct: 342 GVHRHTLRYRMRRVEEILGRSLDDPDARMELWLALK 377 >UniRef50_C0LTN8 SibX n=1 Tax=Streptosporangium sibiricum RepID=C0LTN8_9ACTO Length = 390 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 13/126 (10%) Query: 257 PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA---RPLAR 313 P ++A ++ T +G+ E + D++L +L R A LA RP+ R Sbjct: 253 PAAVADAWEAVATLRRLGRH---EPGLFQLDDVLLEAML--CRAPELAARLAGRLRPVTR 307 Query: 314 LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 + L TLAA+ ++ ++ L+IH NTL +RL R+SELTGL L N D Sbjct: 308 CQPY-----LLDTLAAFLDNDGDRRELARQLYIHPNTLNHRLRRVSELTGLSLANAGDLC 362 Query: 374 LLYVAL 379 LL AL Sbjct: 363 LLKAAL 368 >UniRef50_B5H0P7 Transcriptional regulator n=5 Tax=Streptomyces RepID=B5H0P7_STRCL Length = 432 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/41 (58%), Positives = 32/41 (78%) Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 T+ AL IHR TL YRL+R+ +LTGL L +DRLLL++AL+ Sbjct: 388 TAAALGIHRQTLYYRLSRVEQLTGLTLSEGEDRLLLHMALK 428 >UniRef50_Q9LBV9 Orf6 n=10 Tax=Clostridium perfringens RepID=Q9LBV9_CLOPE Length = 313 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 18/101 (17%) Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGL--------LRRTLAAWFRHNVQPL 338 +DL+ L+DS+ D ++K ++ GL + +T+ +F+ + Sbjct: 213 RDLLFETLVDSIDEDL----------KMKMYEDFGLGFSKLDREMIKTIETFFKCGLNIS 262 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 SK L++HRNTL YRL++I + T D+ NF++ ++ +A Sbjct: 263 DASKELYVHRNTLIYRLDKIQKCTSYDIRNFNEAVIFKIAF 303 >UniRef50_C3K679 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K679_PSEFS Length = 401 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 NE PL R L+ TL AWF N +A ++ L +HRNTL +R+ RI L GL Sbjct: 321 NERLGPLLRHDVHHGPSLMP-TLEAWFHENGNLVAAAQRLAVHRNTLTHRVQRIEALCGL 379 Query: 365 DLGNFDDRLLLYVALQL 381 L N DRL + +AL + Sbjct: 380 TLDNAYDRLDIGIALMI 396 >UniRef50_Q0SG89 Possible transcriptional regulator n=2 Tax=Rhodococcus RepID=Q0SG89_RHOSR Length = 503 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 38/58 (65%) Query: 323 LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 L+RTL W R N + AL +HRNT+ R+++I+ LTG +L DDR+ L++AL+ Sbjct: 434 LQRTLEEWLRANGAWDPAAAALSVHRNTVRNRIDKIAALTGRNLDQADDRMELWLALK 491 >UniRef50_B8FRW9 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FRW9_DESHD Length = 469 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 K E L + L F+++ GN + + SY AK + +GK P+ Y Sbjct: 302 KICESLCEELSGAYLLDFKIAYGNLYNTISKLRCSYEEAKEIISIGKIEYPDKNFYNVDS 361 Query: 289 LMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL----AAWFRHNVQPLATSKAL 344 ++ ++ L N++ PL + + ++ G+L L A+ + + + Sbjct: 362 IITDIICRFLHPQV-VNKVFIPLIK-RLTNSEGVLEHNLLESCEAFIDSCMNLNRAAHDI 419 Query: 345 FIHRNTLEYRLNRISELTGLDLGN-FDDRLLL 375 +HRNTL R+ +++ LTGLD N F D L+L Sbjct: 420 MVHRNTLNNRIAKLNSLTGLDPANSFQDALIL 451 >UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B580EB Length = 506 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 111/274 (40%), Gaps = 23/274 (8%) Query: 110 MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAI 168 + A + LE+SR+ ++R E L + L+ +++ P LT G +P Sbjct: 241 LAALVGLERSRMDEARRIENRAAEPL-LRLVLSDDAAPGELTSRLAAAGFAPQEPVTTLS 299 Query: 169 VEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 EV G G+ + E +L +A P LVA V +FG + + D Sbjct: 300 AEVRGGGPGLAQVLVE--ELLSATGQP---VLVATVEG----------ETFGLFASRDTE 344 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPG--SIARSYRTAKT--TMVVGKQRMPESRCY 284 E + T G R + L G + + R A+T + G+ + Sbjct: 345 ALREAVHTIEPALGSARLTLGLSRAADAAGLRAGVQEARHARTLAALTPGRATVLSGDEV 404 Query: 285 FYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 L+L + + LR + L LA + L TL A+ H+ TS L Sbjct: 405 ASHLLLLAAVPEDLRRTFGEKVLGPVLAYDAAHGSE--LITTLKAFLEHSGSWTQTSATL 462 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 +H NTL YR+ RI ELTG D F DR+ LY+A Sbjct: 463 HLHVNTLRYRITRIGELTGRDPSRFADRVDLYLA 496 >UniRef50_A4IKS2 Leucine-rich protein transcriptional regulator n=5 Tax=Geobacillus RepID=A4IKS2_GEOTN Length = 295 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 11/131 (8%) Query: 254 FTGP-----GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 F GP + S+ K ++ P+ Y ++D +P+ L S D ++ Sbjct: 165 FIGPVRPVDDRLHESFLLEKECFSAARRFWPKQTVYEWED-AIPLPLLSAESD---DKTD 220 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 R L+ L D + + R + + + N+ +K L++HRN+L+YR+++ +E TG+D+ Sbjct: 221 RILSFLDQFDEDEI--RAMETFLQCNLNVSMAAKKLYMHRNSLQYRIDKWTEQTGIDIKR 278 Query: 369 FDDRLLLYVAL 379 F + +Y+A+ Sbjct: 279 FKGAVAIYLAI 289 >UniRef50_Q182E5 Putative uncharacterized protein n=10 Tax=Clostridium difficile RepID=Q182E5_CLOD6 Length = 255 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 3/93 (3%) Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 DL+ LD + D N+L ++K++D L T + +++ TS ++F+H Sbjct: 158 DLIRYKTLDLINEDNILNKLI-DFNKIKSIDEE--LLYTGIKFINNDLNISKTSTSMFLH 214 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 RNTL YRL +I+E+ G DL NF++ ++ Y++++ Sbjct: 215 RNTLVYRLEKINEILGFDLKNFENAMIFYLSVK 247 >UniRef50_UPI0001B55647 hypothetical protein StAA4_29765 n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55647 Length = 524 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 7/152 (4%) Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM-VVGKQRMPESRCY- 284 HR+ V + R ++ R LG+ G SIA S A + + +QR C Sbjct: 357 HRELVADIARRAHGALRMPVRAGLGSTVAGLRSIASSRADADLVLRTLAEQRTSPEPCQA 416 Query: 285 -----FYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLA 339 + L VL L GD P R ++ T+ A+ N A Sbjct: 417 AAIDEVWAGATLSVLAQLLAGDASLPRRLGPAVRAHDGEHGTTYAPTILAYLDTNGDIAA 476 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 S L +H NT+ YRL+R E+ G DL + D+ Sbjct: 477 ASARLSVHPNTIRYRLSRAEEIFGFDLADPDE 508 >UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZWF4_9FIRM Length = 359 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 26/145 (17%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL-------MLPV-----LL 295 V+ N ++ +Y+ A+T + +GK E + Y+ L LPV + Sbjct: 216 VAYSNTANDLKDLSNAYKEARTALEIGKIFYAERNVFGYRTLGIGRLLYQLPVSICEMFI 275 Query: 296 DSLRGDWQANEL-ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 + GD + + LA ++T +F +N+ TS+ L++HRNTL YR Sbjct: 276 QEIFGDESLDSIDGETLAIIRT-------------FFENNLNLSETSRQLYVHRNTLVYR 322 Query: 355 LNRISELTGLDLGNFDDRLLLYVAL 379 +I + GLDL F+D + +A+ Sbjct: 323 FEKIQKRFGLDLRTFEDAMTFKLAM 347 >UniRef50_C9YU01 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=C9YU01_STRSW Length = 421 Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A+ R LAR +D+ L TL A++RH++ +T+ AL +H TL+YRL R+ ELTG Sbjct: 339 ADAWLRSLAR--RLDSGPDLLTTLDAYYRHDMHRGSTAAALTVHSRTLDYRLRRVRELTG 396 Query: 364 LDLGN 368 +D G+ Sbjct: 397 IDPGS 401 >UniRef50_D2PWG9 Putative transcriptional regulator, PucR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PWG9_9ACTO Length = 518 Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 305 NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +L PLA L D N+ TL AW H QP +K L +H NTL +R+ RI E+ Sbjct: 435 TKLDGPLATLLRYDIENDTSFVDTLQAWLNHPGQPQQAAKELHLHTNTLRHRMKRIGEIA 494 Query: 363 GLDLGNFDDRLLL 375 LDL + +RL L Sbjct: 495 RLDLSDPRERLAL 507 >UniRef50_Q396V3 Transcriptional regulator, CdaR family n=1 Tax=Burkholderia sp. 383 RepID=Q396V3_BURS3 Length = 381 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 25/267 (9%) Query: 127 QDSRLREELVMNLIQAEENTPALTEW----AQRLGIDLNQPRVVAIVEVD-----SGQLG 177 Q +R RE L+ L ++P E A+ LG+D R+ ++VD G+ G Sbjct: 120 QQARWRETLLHQLYSIVFHSPGDIEGFHSTAEALGLDFAVSRIALAIDVDLDGHTPGERG 179 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL--NSFGRWDAEDHRKRVEQLI 235 + ++ T+P +NLV +++ P + +S R D R E+ Sbjct: 180 EACERIAIAAARHLGTSP--DNLVRAWHRGRLILWTPCVHGDSLCRSD----RLTTERAR 233 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 + Q+R R+ +G GP A S A + G + Y +++ Sbjct: 234 ALVAALPQIR-RIGIGLMNEGPAGWAASVEEAVKALDAGAANDRRDKVCPYASIVIE--- 289 Query: 296 DSLRGDWQANELARPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 G +A+ + R L L + + + L TL A+F + T+ AL IH NTL YR Sbjct: 290 ---EGARRADNVRRYLVSLLEQLSSEPELLATLKAYFEQGQRLGKTAGALAIHANTLSYR 346 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQL 381 + RI L G L + L VAL+L Sbjct: 347 IERIETLLGASLDDVSWVSRLDVALKL 373 >UniRef50_C1B3H1 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B3H1_RHOOB Length = 374 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 40/78 (51%) Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A + P R N L T A+F + AT+ AL IHR TL YRL RI ELT Sbjct: 289 AEAVVTPAVRALFEHRNRDLLSTAEAFFDNAGDIAATTGALSIHRQTLYYRLRRIQELTT 348 Query: 364 LDLGNFDDRLLLYVALQL 381 LDL DRL L+V L L Sbjct: 349 LDLSIGQDRLELHVGLAL 366 >UniRef50_C1XP63 Putative uncharacterized protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XP63_9DEIN Length = 340 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 6/93 (6%) Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L ++LDS +G R L L ++ + L T+ + + P + L +H NT Sbjct: 246 LALVLDSPKGQ------ERLLGLLAPLEGHPELAATVQEYLEARLSPKRVAHRLGVHINT 299 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + YRL R+ ELTG DLG +D LL +A +L+E Sbjct: 300 VFYRLRRVEELTGCDLGRLEDLTLLQLAFRLEE 332 >UniRef50_Q6WSB6 Putative uncharacterized protein n=1 Tax=Amycolatopsis azurea RepID=Q6WSB6_9PSEU Length = 546 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 47/329 (14%) Query: 78 INLPLRLEGEIVGVI-GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELV 136 + + +R EI+G I EP + + L+ T + L RL + RLR +LV Sbjct: 226 VAIAVRAGDEILGSIWAAVREPLSEERTQALIDATKLVALHMLRLRAGADVERRLRADLV 285 Query: 137 MNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA------MAELQQLQN 190 ++ P E RLG+ L QP +V + G LG + +A+ Q++ + Sbjct: 286 STALEGGSGAP---EAIARLGL-LGQPSIVLAM----GLLGAPALEDDLRLVADRQRVAD 337 Query: 191 ALT-----TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 AL R+ + + + +V P + +D ++R ++ + E R Sbjct: 338 ALAMHLSAVQPRSAVALVGDVAYGIVPMPGSH-------DDCQERSVRVASTFLERTGRR 390 Query: 246 FRVSLGNYFTGP----GSIARSYRTAKTTMV------VGKQRMPESRCYFYQDLMLPVL- 294 ++G GP GS R+ R + G +R+ S LML + Sbjct: 391 AAAAIG---IGPLALDGSGLRASRDGADRALRVLLTNSGGKRVATSDDVHVDALMLELAD 447 Query: 295 LDSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 L + RGD P+ARL D+ L TL W A S A ++H NT Sbjct: 448 LAAARGDVATG----PVARLLAYDDQHQSQLVHTLRCWLDAFGDIGAASAAAYVHPNTFR 503 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQL 381 YRL R++E+ +DL + +R V L+L Sbjct: 504 YRLRRLAEVGEIDLDDAGERFAAMVQLRL 532 >UniRef50_C3JQF0 Regulatory protein n=2 Tax=Rhodococcus erythropolis RepID=C3JQF0_RHOER Length = 497 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Query: 278 MPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQP 337 +P R + L LD R A RPL K + L RTLA W HN Sbjct: 390 LPSMRFAELSESGLSAFLDQDRSTAFAAAHLRPLLEAKGGSD---LYRTLAMWLAHNGVG 446 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 A + AL IHR+TL RL RI L LDLG+ +R L++ +L Sbjct: 447 DAAATALNIHRHTLRSRLARIESLLQLDLGSPTERAELWLEYRL 490 >UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FRM6_DESHD Length = 404 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 37/63 (58%) Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 NN +L TL +F N+ T++ LF+H NTL YRL R+ ELT DR LY+A Sbjct: 328 NNSMLLDTLRCYFDANLNINETAERLFLHINTLRYRLKRVEELTNTSFQKAYDRTNLYIA 387 Query: 379 LQL 381 L++ Sbjct: 388 LKV 390 >UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID=Q9KEU2_BACHD Length = 557 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%) Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG----KQRMPES 281 D + ++Q + +M ++ F + NY IA +++ A + G K+R ++ Sbjct: 396 DAIRDIQQELNQMLDFS---FSFGVSNYTERVTDIATAFQEAVDALRSGYRENKKRFIKT 452 Query: 282 -RCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLAT 340 R +L + L+ +Q++ + LA +T + LL TL ++ H+ Q T Sbjct: 453 YRIKEMTELFKSIPQQKLKEFYQSS--LKDLAFPETKEKQDLLE-TLDSFLNHHCQISET 509 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 +K++FIHRNT+ YR+ + E+ G+DL + L L +AL Sbjct: 510 AKSMFIHRNTVIYRIKKCEEILGIDLKGGHETLQLRMAL 548 >UniRef50_A6W7X2 Transcriptional regulator, PucR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W7X2_KINRD Length = 456 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%) Query: 311 LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 LA L +++ +LR + A+ H+ T+ AL +HRNT+ +R+ R+ L G+ L + Sbjct: 382 LAPLAAVEDGAVLRASARAFLEHHGARQPTADALGVHRNTVRHRVARLEALLGISLDSAA 441 Query: 371 DRLLLYVALQLDE 383 DR L++AL DE Sbjct: 442 DRAELWLALTADE 454 >UniRef50_Q9KDS0 BH1141 protein n=1 Tax=Bacillus halodurans RepID=Q9KDS0_BACHD Length = 297 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 41/59 (69%) Query: 323 LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L +++ +F+HN+ + +++L +HRN+L+YR+++ E TG+D+ F ++Y+AL L Sbjct: 234 LLQSITCYFKHNLNITSAARSLHLHRNSLQYRVDKFIEKTGIDIRQFSQASVVYLALLL 292 >UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TL42_ALKMQ Length = 411 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF-----YQDLMLPVLLDSLRGDW 302 + +G + I +SY A + G+ R ++ Y+ L L L + Sbjct: 268 IGIGRNYDVTKEIWKSYEEANRAVECGRGRESRQVVHYDGLGIYRILSYENLHPELIQLY 327 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 Q E+ PL + D L +T+ +F++N S ++ H NT+ YR+ RI E+T Sbjct: 328 Q--EVLEPLVKYDE-DKGTELVKTVKMFFKYNGNIKRISTEMYTHYNTIVYRIQRIQEIT 384 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 +DL + D RL +++AL++ E Sbjct: 385 QMDLEDDDTRLNVHLALKILE 405 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammapro... 478 e-133 UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax... 364 2e-99 UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=S... 363 5e-99 UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gamm... 360 5e-98 UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconac... 353 7e-96 UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=... 352 1e-95 UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera ... 346 8e-94 UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gamm... 337 4e-91 UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobact... 323 5e-87 UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator ... 318 2e-85 UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiel... 317 6e-85 UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteure... 315 2e-84 UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobac... 308 2e-82 UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=... 305 2e-81 UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Ta... 304 4e-81 UniRef50_A7JU45 Sugar diacid utilization transcriptional regulat... 299 1e-79 UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=M... 297 4e-79 UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulat... 296 8e-79 UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholder... 296 9e-79 UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacil... 285 2e-75 UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinob... 285 2e-75 UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=... 282 2e-74 UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacil... 280 7e-74 UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudom... 279 1e-73 UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobac... 278 2e-73 UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 275 2e-72 UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 273 6e-72 UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 268 2e-70 UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional reg... 266 6e-70 UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobac... 265 2e-69 UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus ... 257 4e-67 UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=... 257 5e-67 UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoan... 256 1e-66 UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia... 255 3e-66 UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 T... 253 1e-65 UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus su... 252 2e-65 UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Ta... 251 4e-65 UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillu... 250 5e-65 UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiob... 250 6e-65 UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 ... 249 8e-65 UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacil... 249 1e-64 UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquet... 249 2e-64 UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethi... 247 4e-64 UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=S... 246 1e-63 UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 ... 246 1e-63 UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=... 244 3e-63 UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clos... 244 6e-63 UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobac... 243 9e-63 UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacteriu... 242 2e-62 UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostri... 242 2e-62 UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staph... 241 3e-62 UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethi... 241 3e-62 UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicut... 241 3e-62 UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 239 9e-62 UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacilla... 239 1e-61 UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 ... 238 3e-61 UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillu... 237 5e-61 UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coproco... 235 2e-60 UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicut... 234 3e-60 UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 233 7e-60 UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus c... 233 9e-60 UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=C... 233 1e-59 UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=... 232 1e-59 UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacil... 230 7e-59 UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotro... 230 7e-59 UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brach... 229 1e-58 UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales ... 228 2e-58 UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=... 228 3e-58 UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=L... 227 5e-58 UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteri... 227 7e-58 UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacteriu... 226 2e-57 UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactoba... 225 2e-57 UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax... 225 2e-57 UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactoba... 224 3e-57 UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Ente... 223 1e-56 UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 221 4e-56 UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacil... 220 6e-56 UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermoba... 219 1e-55 UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepI... 216 1e-54 UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobac... 215 2e-54 UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteri... 215 2e-54 UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttle... 213 1e-53 UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax... 211 4e-53 UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostri... 208 4e-52 UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria... 206 2e-51 UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=C... 205 2e-51 UniRef50_C1B522 Putative CdaR family transcriptional regulator n... 204 4e-51 UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdol... 202 1e-50 UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 201 3e-50 UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmic... 198 2e-49 UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostri... 196 9e-49 UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminoc... 195 3e-48 UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=M... 186 2e-45 UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=C... 183 1e-44 UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostri... 181 3e-44 UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicu... 181 5e-44 UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5... 180 9e-44 UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 177 4e-43 UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelot... 177 6e-43 UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=M... 176 1e-42 UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria ... 176 2e-42 UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoan... 175 2e-42 UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sangu... 174 6e-42 UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 173 9e-42 UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Ente... 172 2e-41 UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 171 3e-41 UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 171 6e-41 UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=M... 169 2e-40 UniRef50_C9S1P6 Putative transcriptional regulator, PucR family ... 169 2e-40 UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostri... 167 5e-40 UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 165 2e-39 UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=C... 165 3e-39 UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Strepto... 165 3e-39 UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacter... 165 3e-39 UniRef50_A8UB66 Putative uncharacterized protein (Fragment) n=1 ... 163 8e-39 UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethi... 163 1e-38 UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaeros... 162 1e-38 UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces R... 162 1e-38 UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=N... 162 1e-38 UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminoc... 161 4e-38 UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostri... 160 7e-38 UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 159 2e-37 UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenuli... 158 2e-37 UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostri... 157 9e-37 UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID... 157 9e-37 UniRef50_C0ZE84 Putative transcriptional regulator n=1 Tax=Brevi... 156 1e-36 UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n... 156 1e-36 UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 155 3e-36 UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodoco... 155 3e-36 UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clo... 154 4e-36 UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains ... 154 6e-36 UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoan... 153 1e-35 UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n... 153 1e-35 UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=R... 152 3e-35 UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=C... 150 7e-35 UniRef50_C0ZJB8 Putative transcriptional regulator n=2 Tax=Bacil... 150 8e-35 UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethioba... 150 9e-35 UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 149 1e-34 UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=D... 149 1e-34 UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobac... 149 2e-34 UniRef50_A1SCB3 Transcriptional regulator, CdaR family n=4 Tax=A... 149 2e-34 UniRef50_A1SPN8 Transcriptional regulator, CdaR family n=1 Tax=N... 147 5e-34 UniRef50_D2AXV2 Putative transcriptional regulator, PucR family ... 147 7e-34 UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 147 7e-34 UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliph... 146 1e-33 UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family ... 146 1e-33 UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=T... 146 1e-33 UniRef50_A8RJG3 Putative uncharacterized protein n=1 Tax=Clostri... 145 2e-33 UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1... 145 4e-33 UniRef50_D2M035 Transcriptional regulator, PucR family n=1 Tax=B... 144 4e-33 UniRef50_Q0S5V7 Putative uncharacterized protein n=1 Tax=Rhodoco... 144 5e-33 UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 144 6e-33 UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliph... 142 2e-32 UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=C... 142 2e-32 UniRef50_D2S8H6 Transcriptional regulator, CdaR n=1 Tax=Geoderma... 142 2e-32 UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces s... 142 3e-32 UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID... 142 3e-32 UniRef50_D2B363 Putative transcriptional regulator, PucR family ... 141 4e-32 UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=P... 140 7e-32 UniRef50_A8WDN0 Putative regulatory protein n=1 Tax=Streptomyces... 140 9e-32 UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerob... 140 9e-32 UniRef50_A2SP17 Transcriptional regulator, CdaR family n=1 Tax=M... 140 9e-32 UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillacea... 140 1e-31 UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmat... 139 1e-31 UniRef50_Q9KC39 BH1735 protein n=1 Tax=Bacillus halodurans RepID... 138 3e-31 UniRef50_C0D4S9 Putative uncharacterized protein (Fragment) n=1 ... 138 4e-31 UniRef50_Q896S3 Transcriptional regulatory protein n=1 Tax=Clost... 138 4e-31 UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=M... 137 5e-31 UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=B... 135 2e-30 UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=C... 135 2e-30 UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 135 3e-30 UniRef50_A8SJR4 Putative uncharacterized protein n=1 Tax=Parvimo... 135 3e-30 UniRef50_Q0B7J6 Putative uncharacterized protein n=3 Tax=Proteob... 134 5e-30 UniRef50_A8FAN6 Putative uncharacterized protein n=2 Tax=Bacillu... 134 5e-30 UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus Re... 134 8e-30 UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus ... 133 9e-30 UniRef50_A8VUR2 Putative transcriptional regulator, PucR family ... 133 1e-29 UniRef50_A4JMN4 Transcriptional regulator, CdaR family n=1 Tax=B... 132 2e-29 UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=A... 132 2e-29 UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevi... 131 4e-29 UniRef50_D2LXR4 Putative transcriptional regulator, PucR family ... 131 5e-29 UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID... 130 1e-28 UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kl... 129 1e-28 UniRef50_Q5QJ55 PmoR n=2 Tax=Mycobacterium RepID=Q5QJ55_9MYCO 129 2e-28 UniRef50_C4GC67 Putative uncharacterized protein n=1 Tax=Shuttle... 129 3e-28 UniRef50_A1R5V9 Putative uncharacterized protein n=1 Tax=Arthrob... 129 3e-28 UniRef50_B0A6R8 Putative uncharacterized protein n=1 Tax=Clostri... 128 3e-28 UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus... 128 3e-28 UniRef50_A1R364 GAF domain protein n=1 Tax=Arthrobacter aurescen... 128 4e-28 UniRef50_C1BDR7 Putative CdaR family transcriptional regulator n... 128 4e-28 UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostri... 128 4e-28 UniRef50_A8VR74 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 128 4e-28 UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 ... 128 4e-28 UniRef50_C6D0D7 Transcriptional regulator, PucR family n=1 Tax=P... 127 5e-28 UniRef50_D1WRV4 Transcriptional regulator, CdaR n=1 Tax=Streptom... 127 5e-28 UniRef50_Q0RXQ9 Putative uncharacterized protein n=1 Tax=Rhodoco... 127 6e-28 UniRef50_C6D273 Transcriptional regulator, PucR family n=1 Tax=P... 127 7e-28 UniRef50_D2LUM4 Putative transcriptional regulator, PucR family ... 127 8e-28 UniRef50_C8XKF3 Putative transcriptional regulator, PucR family ... 127 8e-28 UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=La... 127 9e-28 UniRef50_A6CS53 Putative uncharacterized protein n=1 Tax=Bacillu... 126 1e-27 UniRef50_B8FZU5 Putative transcriptional regulator, PucR family ... 126 2e-27 UniRef50_A9KS82 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 125 3e-27 UniRef50_C1YTW9 Sugar diacid utilization regulator n=1 Tax=Nocar... 125 4e-27 UniRef50_B1HSD1 Putative uncharacterized protein n=1 Tax=Lysinib... 124 6e-27 Sequences not found previously or not previously below threshold: UniRef50_D1Y2S3 Putative transcriptional regulator, CdaR n=1 Tax... 152 2e-35 UniRef50_B8FTC8 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 148 3e-34 UniRef50_UPI0001C4248F putative transcriptional regulator n=1 Ta... 144 8e-33 UniRef50_UPI0001C3208F transcriptional regulator, CdaR n=1 Tax=C... 143 1e-32 UniRef50_A3TQC7 Transcriptional regulator n=1 Tax=Janibacter sp.... 142 2e-32 UniRef50_A6W993 Transcriptional regulator, CdaR n=4 Tax=Actinomy... 142 3e-32 UniRef50_UPI0001C423A1 putative transcriptional regulator n=1 Ta... 140 6e-32 UniRef50_B7JD78 Putative uncharacterized protein n=10 Tax=Bacill... 139 2e-31 UniRef50_D1C782 Transcriptional regulator, CdaR n=1 Tax=Sphaerob... 138 3e-31 UniRef50_O32138 Purine catabolism regulatory protein n=3 Tax=Bac... 136 1e-30 UniRef50_C9M8Q2 Putative transcriptional regulator, CdaR n=1 Tax... 135 2e-30 UniRef50_B8FTD6 Transcriptional regulator, CdaR n=3 Tax=Desulfit... 135 2e-30 UniRef50_D2B3U7 Putative transcriptional regulator, PucR family ... 135 3e-30 UniRef50_D1A7Y9 Transcriptional regulator, CdaR n=1 Tax=Thermomo... 134 4e-30 UniRef50_C3JW82 Transcriptional regulator n=3 Tax=Rhodococcus Re... 134 5e-30 UniRef50_Q9KBD4 BH1994 protein n=2 Tax=Bacillus halodurans RepID... 134 5e-30 UniRef50_A8RX21 Putative uncharacterized protein n=3 Tax=Clostri... 134 8e-30 UniRef50_C1B780 Putative CdaR family transcriptional regulator n... 133 1e-29 UniRef50_A0LVE5 Purine catabolism PurC domain protein n=1 Tax=Ac... 132 2e-29 UniRef50_C9S158 Transcriptional regulator, PucR family n=7 Tax=G... 132 2e-29 UniRef50_Q46PC8 Transcriptional regulator, CdaR family n=1 Tax=R... 131 3e-29 UniRef50_C7MYB4 Transcriptional regulator, CdaR family n=2 Tax=A... 131 5e-29 UniRef50_C7QE98 Transcriptional regulator, PucR family n=1 Tax=C... 130 6e-29 UniRef50_Q0SAZ0 Probable carbohydrate diacid regulator n=1 Tax=R... 130 7e-29 UniRef50_Q97J60 Possible transcriptional regulator from leucine-... 130 8e-29 UniRef50_Q3YB12 Putative regulator n=1 Tax=Geobacillus stearothe... 130 9e-29 UniRef50_A7Z8F6 PucR n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 130 9e-29 UniRef50_C2XK96 Purine catabolism regulatory protein n=2 Tax=Bac... 130 1e-28 UniRef50_C0Z511 Putative transcriptional regulator n=1 Tax=Brevi... 130 1e-28 UniRef50_A1SGR6 Putative uncharacterized protein n=1 Tax=Nocardi... 130 1e-28 UniRef50_D1Y5Z2 Putative uncharacterized protein n=1 Tax=Pyramid... 129 2e-28 UniRef50_B4WNM1 Purine catabolism regulatory protein-like family... 129 2e-28 UniRef50_C1TQL7 Putative uncharacterized protein n=1 Tax=Dethios... 129 2e-28 UniRef50_D1CBY0 Transcriptional regulator, CdaR n=1 Tax=Thermoba... 129 2e-28 UniRef50_UPI0001C423CB hypothetical protein BpOF4_15855 n=1 Tax=... 129 2e-28 UniRef50_C4G116 Putative uncharacterized protein n=1 Tax=Abiotro... 128 3e-28 UniRef50_B0P9V1 Putative uncharacterized protein n=1 Tax=Anaerot... 128 4e-28 UniRef50_C3JVB9 DNA-binding protein n=2 Tax=Rhodococcus erythrop... 128 4e-28 UniRef50_B5CTE6 Putative uncharacterized protein n=1 Tax=Ruminoc... 127 8e-28 UniRef50_A5D5M5 Regulator of polyketide synthase expression n=1 ... 126 1e-27 UniRef50_A9AWI2 Putative transcriptional regulator, PucR family ... 125 2e-27 UniRef50_B5HA48 Regulatory protein n=12 Tax=Streptomyces RepID=B... 125 2e-27 UniRef50_C7PZT6 Transcriptional regulator, CdaR n=1 Tax=Catenuli... 125 3e-27 UniRef50_A0R6B7 GAF domain protein, putative n=1 Tax=Mycobacteri... 124 5e-27 UniRef50_B4BLE6 Transcriptional regulator, PucR family n=2 Tax=G... 124 6e-27 >UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammaproteobacteria RepID=CDAR_ECOLI Length = 385 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV Sbjct: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR Sbjct: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS Sbjct: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE Sbjct: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG Sbjct: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE Sbjct: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 LTGLDLGNFDDRLLLYVALQLDEER Sbjct: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 >UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax=Vibrio RepID=A7JY33_VIBSE Length = 380 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 162/379 (42%), Positives = 240/379 (63%), Gaps = 3/379 (0%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV RTM II N+NVM++ G IIGSGD +R+G++H+GA+L L+ G +++++ Sbjct: 4 LDHSLAQQIVDRTMSIIGHNVNVMNSAGIIIGSGDPKRVGQVHDGAVLALNHGDSLELNE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 L GV+ GIN+ L+L G++VG++G+TGEPE +R + +LV MTAE+ +EQ+ L+ Sbjct: 64 QQCLTLQGVKPGINMLLKLHGDVVGIVGVTGEPEKIRDFAKLVKMTAELTIEQAALVEKF 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 D R REE ++ I + L +WA RL ID+ QPRV ++EV + +M + Sbjct: 124 QWDRRHREEFILAWINGKLTDEELKDWAMRLSIDVTQPRVATVIEVSTPS--ASKSMKSV 181 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + + L PERNNLVAIVS+ E+VVLKP +S +WD++ +R+++L++R+ ++ Sbjct: 182 RNIVELLEYPERNNLVAIVSVNEIVVLKPC-HSAKQWDSQIESERIDKLMSRLSDHDSHT 240 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 F ++LG F P +A SY++AK + +GKQ PE R Y + +L LPVLL L WQ Sbjct: 241 FHIALGQLFNEPKDVALSYQSAKQVLAIGKQFYPEKRKYLFDELRLPVLLAPLADIWQGE 300 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 ++ + RLK D +G L +TL A F N SK LFIHRNTL YRL +I+E+TGL Sbjct: 301 QIIDGVKRLKEKDKSGQLLKTLDALFECNGNVTECSKMLFIHRNTLRYRLEKITEITGLP 360 Query: 366 LGNFDDRLLLYVALQLDEE 384 NF LY+A +L + Sbjct: 361 TTNFVGLAELYIATRLSKM 379 >UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=Shewanella RepID=Q07ZT4_SHEFN Length = 413 Score = 363 bits (932), Expect = 5e-99, Method: Composition-based stats. Identities = 179/381 (46%), Positives = 250/381 (65%), Gaps = 1/381 (0%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + +DT +A IV RTM+II NINVM+A+ I+GSGD +RIG +HEGALL +SQ R V+I Sbjct: 30 FQIDTLIAAKIVDRTMKIIGHNINVMNAQAVILGSGDIDRIGTVHEGALLAISQNRNVEI 89 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 A+A +LHGV+ G+NLPL G++VGVIG+TGEP+ L YGEL+ MTAEM++EQ+ L Sbjct: 90 SQAIASNLHGVKPGLNLPLHYHGQVVGVIGITGEPDTLSHYGELLKMTAEMIVEQANLQE 149 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L +R EE + LI A E++ P+L +WA +LGIDL+ PRV AI+E+DS Sbjct: 150 QLQWQNRQTEEFISQLIHANEQDLPSLQQWALQLGIDLSVPRVAAIIELDSNNPLYQQDN 209 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 L+Q+ L P R+NL+A+ SLT++V+LKPA ++D E +R+ +L+ R+ Sbjct: 210 QALKQVLYLLQNPVRDNLIAMTSLTQLVILKPAFLDGKQFDPELENQRINKLLKRLPANM 269 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 QL +SLG+YF G I+ SYRTAK T+ +GK+ P Y YQD L VLL LR W Sbjct: 270 QLSLHISLGHYFGGELGISYSYRTAKETLDIGKKLHPTKTKYLYQDYSLQVLLSGLRHHW 329 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + N LA P +L +DNN L++TLAA+ H A + +LFIHRNTL YRL++I +T Sbjct: 330 RGNALAGPYLKLIEVDNNQQLQKTLAAYLDHMGDIQACANSLFIHRNTLRYRLDKIQTIT 389 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 +DL +F+ L LY+ + + Sbjct: 390 NIDLRSFNGLLSLYLGQLIHQ 410 >UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gammaproteobacteria RepID=Q3BM11_XANC5 Length = 396 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 195/379 (51%), Positives = 260/379 (68%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV R M IID N+NVMD G II SG+ RIG+LHEGALLVLS+ V+ID Sbjct: 4 LDRTLAQSIVDRAMTIIDGNVNVMDHSGVIIASGEPARIGQLHEGALLVLSRQGRVEIDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A+A+ L VR G+NLPL EG IVG +GLTG+P+ + + ELV M AE MLEQ+ L+ LL Sbjct: 64 ALAQQLDAVRPGVNLPLIAEGRIVGCVGLTGDPQRIGQQAELVRMAAEAMLEQAGLLRLL 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 A+D+RLREE+ + LI+ + TPAL WA+RLGI L+ PRV A++EV+S L +D+ + EL Sbjct: 124 ARDARLREEVTLGLIRPDGPTPALAGWAERLGIALDLPRVAAVIEVESDSLDLDAMLVEL 183 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 Q+L L+TPER NL+A +L E+VVLKPAL+ G WD + R+R L+ RM+ +LR Sbjct: 184 QRLHTLLSTPERGNLIAATALNELVVLKPALDRRGHWDVAEQRRRAHSLLERMRASSRLR 243 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 R++LG YF +A S++ A+TTM +GK R P + +FY D LPVL+D LR WQA Sbjct: 244 IRLALGQYFPQSNGLALSHQIARTTMRIGKARTPYADAFFYDDYRLPVLVDDLRQAWQAE 303 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL +PL L D L +TL+ WF ++ T+KAL IHRNTL+YR+ RI EL +D Sbjct: 304 ELRKPLQALLAQDRRSQLLKTLSVWFGAGMRMAPTAKALGIHRNTLDYRMQRIQELCAVD 363 Query: 366 LGNFDDRLLLYVALQLDEE 384 LGN DD + LY+AL++ + Sbjct: 364 LGNTDDCMRLYLALRMRHD 382 >UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZI25_GLUDA Length = 400 Score = 353 bits (905), Expect = 7e-96, Method: Composition-based stats. Identities = 170/381 (44%), Positives = 235/381 (61%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M +D +AQ IV R+M +I NINVMD+ G II SGD R+G++H+GAL V+++ Sbjct: 1 MPSVAIDPALAQAIVDRSMTVIACNINVMDSHGVIIASGDPARLGQVHDGALRVMARQEA 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+I+ A R G+NLPLRL G +VG +GLTG P +R Y ELV M AE MLEQ++ Sbjct: 61 VEIEPRAAPPDGDARPGVNLPLRLGGAVVGCVGLTGVPGTIRPYAELVRMAAETMLEQAQ 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L++++RLREELV++LI+ E PAL A RLGIDL RV AIVE+ + Sbjct: 121 QSRTLSRETRLREELVLSLIRDEAPIPALAASAARLGIDLRPARVAAIVEILPRTQDGIA 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + ++ +L L P++ NLVA +SLTE+ VL PAL + G WD + R+R ++L+ R + Sbjct: 181 LVGDMHRLGTLLGAPDQGNLVAPLSLTEIAVLTPALTARGTWDPDRLRERAQRLLARAQT 240 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 L R++LG GPG +ARSY+ A+ T+ G++ P R FY+D+ LPVLLD Sbjct: 241 ATGLDLRLALGRPVEGPGGMARSYQVARATLAAGRRLHPARRALFYEDMRLPVLLDDPLR 300 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 DW+ EL PL L + L RTL W H +Q AT+ AL +HRN+L+YRL +I Sbjct: 301 DWRTQELRAPLRPLTDAARHAPLLRTLRTWLDHGMQQRATAAALGLHRNSLDYRLRQIER 360 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 L G+DL D + LY+AL L Sbjct: 361 LCGVDLTRSADIVALYLALHL 381 >UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=Gammaproteobacteria RepID=A4Y5G5_SHEPC Length = 413 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 168/409 (41%), Positives = 249/409 (60%), Gaps = 27/409 (6%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD+ +A+ IV+RTM+II NINVM+ +G I+GSGD +RIG +HEGALL ++Q R V+I Sbjct: 2 YLLDSAIAKQIVSRTMKIIGHNINVMNGQGMILGSGDPKRIGSIHEGALLAIAQNRNVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 VA LHGV+ GINLPL +G+I+GV+G+TG+P L YGEL+ MTAEM++EQ+ L Sbjct: 62 SQEVAASLHGVKPGINLPLHYQGQIIGVVGITGDPNELTHYGELLKMTAEMIVEQANLQD 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD---- 179 L ++R REE ++ LI+AE + L WA++L ID++ PRV AI+E+ + Sbjct: 122 KLQWENRQREEFILQLIKAETDDRQLHRWAKQLDIDMSMPRVAAIIEISEKSTPIKIPKR 181 Query: 180 -----------------------SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 L+Q+ + L P+R NL+A+ S++++V+LKPA Sbjct: 182 PSDPLAIDLADTLQVNASDDRNHRVGETLKQVLHLLQYPDRGNLIAMTSMSQLVILKPAF 241 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 +WD E +R+++L+ R+ L F+++LG++F G IARSY+TA T+ +GKQ Sbjct: 242 LDGKQWDPELENQRIDRLLQRLPAQMNLNFKIALGHFFPENGGIARSYQTALETLALGKQ 301 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQ 336 PE Y ++D L VLL L+ DW+ LA P +L D NG LR+TLAA+ H Sbjct: 302 LNPEGNKYLFEDYSLQVLLSGLKYDWRGQALAMPYQQLAKADKNGQLRKTLAAYITHFGD 361 Query: 337 PLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 + LFIHRNTL YRL++I ++T D+ + L LY+ +D + Sbjct: 362 AQQCANTLFIHRNTLRYRLDKIQQITQADIQSLHGLLSLYLGQLIDSSK 410 >UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera sp. MZ1T RepID=C4ZKY7_THASP Length = 384 Score = 346 bits (887), Expect = 8e-94, Method: Composition-based stats. Identities = 181/377 (48%), Positives = 246/377 (65%), Gaps = 5/377 (1%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ IV R M+I+ TN+NVMD RG II SGDR RIG HEGALLVL+QGR V++D Sbjct: 4 LDASLAQSIVDRAMQILRTNVNVMDERGLIIASGDRARIGSRHEGALLVLAQGRAVEVDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 AVA+ LH R GINLPLR EG +VGV+GL+GEP+ +R+ ELV + AE MLEQ++ M +L Sbjct: 64 AVAQRLHDTRPGINLPLRAEGRVVGVVGLSGEPDAVRQQAELVRLAAETMLEQAQWMQML 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 A+D RLREELV+ LI L +WA RLG+DL +P V ++E+ L D+ +A Sbjct: 124 ARDQRLREELVLQLIGVSPPGAGLDDWASRLGVDLARPCVALLIEIADASLAADAVLAAQ 183 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 Q+L+ L E A V+L E+ VL P + D R R++ L R+ G + Sbjct: 184 QRLRRLLAEQEPGLACAPVTLRELAVLMPLPAAES-----DLRSRLQALHGRLGGEGSGQ 238 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 ++LG F G +ARS+++A+ T+ G++ P++ + Y +L LPVLL L W+A+ Sbjct: 239 PCLALGGRFGGDDGLARSWQSARATLQAGRRHRPQAAIHCYDELTLPVLLAGLGEGWRAD 298 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL RPL RL D +G LR TLAAWF H+++ ++ AL +HRNTLEYRL RI E+TGLD Sbjct: 299 ELRRPLRRLAQQDRDGQLRCTLAAWFAHDMKAAPSAGALHVHRNTLEYRLRRIGEITGLD 358 Query: 366 LGNFDDRLLLYVALQLD 382 L +D LLL++ L+LD Sbjct: 359 LARLNDCLLLFIGLELD 375 >UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gammaproteobacteria RepID=Q7MHW7_VIBVY Length = 422 Score = 337 bits (864), Expect = 4e-91, Method: Composition-based stats. Identities = 165/385 (42%), Positives = 247/385 (64%), Gaps = 7/385 (1%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 ++ L+ +A+ IV RTM+II ++NVMD +GRIIGSGD R+ + HEGA+L +++ RV Sbjct: 22 LSSMKLNETIARQIVERTMKIIPYSVNVMDDQGRIIGSGDPSRLQQKHEGAVLAITECRV 81 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+ID A A HL GV+ GINLP+ +++GVIG++G P+ ++ YGELV MTAE+++EQ+ Sbjct: 82 VEIDKATASHLKGVKPGINLPILFLEQVIGVIGVSGAPDEVKHYGELVKMTAELIVEQAA 141 Query: 121 LMHLLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 LM + + R REELV+ LI N L A+RLG++L++PR+ A+V+V + Sbjct: 142 LMSQVQWNKRHREELVLQLISGATLNDNQLNSIAERLGLNLSEPRIAAVVKVFPDKQ-TS 200 Query: 180 SAMAELQQLQNALTTPERNNLVAI--VSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 ++ LQQ+ + L PER+NLV I VS E+VVLKP + W E KR+ QL+ R Sbjct: 201 LSLEHLQQIVHLLEYPERDNLVGILSVSNNEVVVLKPISLTDNGWSKEVETKRINQLLKR 260 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL-D 296 + + G +++LG+YF G +A+S+ TAK TM + + +FYQD LPVL+ D Sbjct: 261 VSKEGNFSIKIALGDYFEGLAGLAQSFETAKLTMQLMAE--QSGTVFFYQDHKLPVLMSD 318 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 L W+A +L PL +L+ D+ G+L +TL A+F N T +AL IHRNTL YR+ Sbjct: 319 LLSQPWKAEQLQAPLLKLQKKDSKGVLLKTLTAYFAQNCDACRTCQALHIHRNTLRYRIE 378 Query: 357 RISELTGLDLGNFDDRLLLYVALQL 381 +I ++T L+ N ++ LY+AL+L Sbjct: 379 KIEDITSLNFNNLNNTFQLYIALEL 403 >UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobacteriaceae RepID=B5R4K1_SALEP Length = 395 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 145/380 (38%), Positives = 206/380 (54%), Gaps = 8/380 (2%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L A+ IV R M+II ++NVMD G II SG+ R+ + HEGA+L L + R V+ID Sbjct: 8 YLKGYTARQIVQRAMKIIPYSVNVMDEHGVIIASGEPSRLRQRHEGAILALKENRFVEID 67 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A A L GVR GINLP+ +++GV+G+TGEPE +R Y ELV M AE+++E L+ Sbjct: 68 SATANQLKGVRSGINLPISFHEQLIGVVGITGEPEEVRAYAELVKMAAELVIEHMVLIEQ 127 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D R REEL+ LI E +T +L A LGIDL PRVV I+E+ Sbjct: 128 RQWDKRYREELINQLILRENSTESLRSMAAYLGIDLAVPRVVLIIELSQPDR------EA 181 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+ + + RN+LV E++++KP G+W+ ++ + G Sbjct: 182 LRNVMDYFENHARNHLVTFTEFNELIIIKPITLKEGKWNTRQEMGELQIFKSWAASSGFS 241 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 R+ +G YF G + RS TA+ T + K++ S+ FY D LP LL L WQ Sbjct: 242 --RILVGGYFAGETGLHRSLLTARATQAMAKRQKLRSQYIFYHDHALPALLSGLSESWQV 299 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 EL+R +L D G+L++TL WF HN T+KAL IH NTL YRL R ++T + Sbjct: 300 QELSRLWLQLAQHDAKGVLQQTLRTWFEHNCDLTQTAKALHIHVNTLRYRLQRCEDITHI 359 Query: 365 DLGNFDDRLLLYVALQLDEE 384 + L LY+ ++L E Sbjct: 360 KINELKSTLWLYIGMELQAE 379 >UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3Q7_9BACI Length = 373 Score = 318 bits (814), Expect = 2e-85, Method: Composition-based stats. Identities = 138/367 (37%), Positives = 199/367 (54%), Gaps = 12/367 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ+IV RTM+II NINVM+ +G IIGSGD RI +HEGA+ V+ GR +I + Sbjct: 4 LDGALAQEIVDRTMQIIGRNINVMNEKGVIIGSGDEARIQSVHEGAVQVIGAGRGFEITE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A A L+GV+ GINLP+ + I+GVIG+TGEPE +R YGELV M AEM+L+Q+ LM + Sbjct: 64 AEAGRLNGVKAGINLPITFQDHIIGVIGITGEPEEIRSYGELVRMAAEMILQQAVLMDEM 123 Query: 126 AQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D RL+EEL L+ EN P E RLGIDL+ PR ++ D Sbjct: 124 QWDERLKEELTSQLLSGSENLDPLYFERVNRLGIDLDIPRTAIVI-------AADEQTKS 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +++ L + + +++ +++LK + WD ++ ++ + L Sbjct: 177 YKWIRDRLEKED----LYVMNPGYIILLKKVITKREGWDHGQTMNQLGDWLSALAGSQGL 232 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + ++G Y G ++RSYR A T+ G++ P+ YFY+D LPV + A Sbjct: 233 PCQAAIGQYHPGLEGLSRSYREAVHTLEAGRKLDPQQALYFYEDYKLPVFVARAAELGIA 292 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 A L D G L+ TL + N + + L+IHRNTL YRL RI ELTG Sbjct: 293 GAFQHHAANLNQHDKKGELQETLRIYIEENGDSSSAASRLYIHRNTLRYRLERIKELTGK 352 Query: 365 DLGNFDD 371 D + D Sbjct: 353 DPRSIKD 359 >UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiella RepID=C5B989_EDWI9 Length = 373 Score = 317 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 150/382 (39%), Positives = 220/382 (57%), Gaps = 10/382 (2%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G L +A+ IV R M II ++NVMDARG II SGD R+ + HEGA+LVL++ R+ Sbjct: 1 MDGSDLSEAVARQIVHRAMEIIGHSVNVMDARGVIIASGDTARLHQRHEGAVLVLAENRL 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ++ID+A AR L GVR GINLP+ +VGV+G++G P +R YGELV M AE++LEQ+ Sbjct: 61 IEIDEAAARQLRGVRPGINLPITFHRRLVGVVGISGAPGEVRAYGELVRMAAELILEQAA 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L+ + R RE LV LI E + L A LG+D+ QPR+ + + D+ Sbjct: 121 LLEQSQWEKRYRETLVQQLIADERDEAQLAATAAYLGVDVAQPRIALLFTLQ------DA 174 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L+ L ALT R L+ + ++V+L P + G ++ R+ V QL + Sbjct: 175 HHETLRALLEALTALHREALIGVQGFAQLVMLLPCGD--GVMESPALRRTVRQLTRGIA- 231 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + +G F+G G++ RSYR+A+ + ++ +YQD +LP LL+ L G Sbjct: 232 -ARFALHIYVGGAFSGTGAVCRSYRSAQALQALARRHALSGTVIYYQDHVLPTLLEHLAG 290 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 WQA+EL + RL+ D+ G+L RTL +F N + TSK L IH NTL YRL RIS+ Sbjct: 291 SWQADELGQVWRRLQHQDSRGVLCRTLRTFFAQNCELSQTSKLLHIHVNTLRYRLQRISD 350 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 +T L++ + LY+ +QL Sbjct: 351 ITNLNINQLQSVIQLYLGMQLH 372 >UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteurellaceae RepID=Y093_HAEIN Length = 368 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 135/382 (35%), Positives = 218/382 (57%), Gaps = 18/382 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD A+ IV R M+II ++NVMD G II SG+ R+ + H GA+L L + RVV+I Sbjct: 1 MQLDKYTAKKIVKRAMKIIHHSVNVMDHDGVIIASGNSTRLNQRHTGAVLALRENRVVEI 60 Query: 64 DDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D A+A+ + + GINLP+ G+ +GV+G++GEP +++Y ELV MTAE+++EQ L+ Sbjct: 61 DQALAQKWNFEAQPGINLPIHYLGKNIGVVGISGEPTQVKQYAELVKMTAELIVEQQALL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + R +EE ++ L+ N + + A+ DLN+ RVV ++++ ++ A+ Sbjct: 121 EQESWHRRYKEEFILQLLHCNLNWKEMEQQAKFFSFDLNKSRVVVLIKL------LNPAL 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 LQ L N L E VAI+SL ++VVLK NS +++ L+ +Y Sbjct: 175 DNLQNLINYLEQSEFAQDVAILSLDQVVVLKTWQNSTV------LSAQMKTLLP--ADYS 226 Query: 243 QLRFRVSLGNYFTGP--GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + +++++G P + S+++A++T+ G + P Y + + LPVLL L Sbjct: 227 KQDYKIAVGACLNLPLFEQLPLSFQSAQSTLSYGLKHHPRKGIYVFDEHRLPVLLAGLSH 286 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 WQ NEL +PL+ L + + N +L +TL +F N T++ LF+H NTL YRLN+I + Sbjct: 287 SWQGNELIKPLSPLFS-EENAILYKTLQQYFLSNCDLYLTAEKLFVHPNTLRYRLNKIEQ 345 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 +TGL DD+L LY+ L+ Sbjct: 346 ITGLFFNKIDDKLTLYLGTLLE 367 >UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobacteria RepID=C4I5I6_BURPS Length = 487 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 152/381 (39%), Positives = 223/381 (58%), Gaps = 3/381 (0%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 +D ++A +IV RT+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+ Sbjct: 82 AMMIDARLATEIVVRTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVE 141 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 ID A+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L Sbjct: 142 IDAAMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLT 201 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L +++R REE V+ L++ L WA RLGID+ + + ++ + Sbjct: 202 VELRRNARHREEFVLQLLRRTAAAAELEAWADRLGIDMRLAHAAIVCRLSGVDTEPEAGV 261 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD--AEDHRKRVEQLITRMKE 240 +++ +Q+ L L A S E+V+ GR A KR+ L +++ Sbjct: 262 GQIEAMQSQLAQEWPQLLSAKTSYRELVMFDAVDARAGRDGVLATHAGKRLAALEGTLRK 321 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L Sbjct: 322 VATQPFSLALGIALDGIDGFERSYQCALATLRVGAARTPQRAAYSYYDFVLPVLLSALSQ 381 Query: 301 DWQANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 WQA +L PL RL + +G L TL AW+ H+ P AT++AL IHRNTL+YRL +I Sbjct: 382 GWQARQLRLPLTRLLARERRSGALLDTLKAWYAHDGHPSATAQALGIHRNTLDYRLQQIR 441 Query: 360 ELTGLDLGNFDDRLLLYVALQ 380 + TGLDLG DDRL LY+ALQ Sbjct: 442 DATGLDLGAIDDRLWLYIALQ 462 >UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXK6_9VIBR Length = 367 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 123/377 (32%), Positives = 201/377 (53%), Gaps = 14/377 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 LD ++AQ IV RTM II NINVM+ G ++ SG+ RIG+ H+GALL LS+ V++ Sbjct: 1 MLDAQLAQRIVDRTMPIIGYNINVMNNAGLVVASGESSRIGQTHDGALLALSRKTSVEVT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L GV+ G+NL L+ + I+GV+G+TGEP +R ELV MTAE++++Q+ L+ Sbjct: 61 SEDCKLLSGVKPGVNLLLKHKNAILGVVGITGEPNEIRGVAELVAMTAELIIDQADLLEK 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + +D R R+E ++ + + + + A+++ ++ + + +VE+ + + Sbjct: 121 VQRDRRYRDEFILACLTGRLSPSEMRDGAEQISVNPSDSWELLLVEMPTQDSSTAT---- 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L L ++L A +S +V+ P V + + +++ Sbjct: 177 ---LTERLYQKPGHHLCAHLSARHLVIFVPTEQPLS-------ADSVNEWLHWLEQTPCR 226 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +VS G + +Y +A M +GK P++ Y D LPVLL L G WQ Sbjct: 227 NLKVSTGKFAHRLEEWQTAYNSALQVMKIGKAARPKNTVYLLDDYQLPVLLAPLHGTWQG 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 +L++ A L D +G L TL A+F N T+ LFIHRNTL+YRL++I+E+TG Sbjct: 287 EQLSQMTATLVEHDKSGQLIATLEAYFDANGSANETASKLFIHRNTLKYRLDKITEITGF 346 Query: 365 DLGNFDDRLLLYVALQL 381 + +F LY+A+QL Sbjct: 347 ETTDFSHMAQLYLAIQL 363 >UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65PK8_BACLD Length = 372 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 135/378 (35%), Positives = 190/378 (50%), Gaps = 19/378 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L ++A++IV RTM II NIN+MD G II SGDR RIG+ H GA L+ +V+ I Sbjct: 3 YLSKELAEEIVERTMSIIRHNINMMDENGVIIASGDRSRIGDEHAGAKDALAAEKVISIT 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 L G + G+NLP+ EI+GVIG+TG P + +YGELV M AE+ +EQ+ L Sbjct: 63 PEECSALTGTKPGVNLPIVFHDEIIGVIGITGPPSEVSRYGELVKMAAELTVEQAFLTKQ 122 Query: 125 LAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L D RLREE V+ +IQ + E A+RL I L+ R + E+ S D A Sbjct: 123 LTWDQRLREETVIQMIQGTDLASLDFFERAERLNIPLDGQRTCLVFELPS----ADMKPA 178 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +++L+ LT +L A +SL E+ V+ + R D +++ K Sbjct: 179 FIKKLEKHLTAK---DLYANISLKEVAVILAGAPTKSRSD---LFSAWNGWLSQWK---- 228 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R +LG + SY++AK T+ + + Y Y++ +PVLL + Q Sbjct: 229 -TVRGALGEQADQLQQLPFSYQSAKQTLKIAENNCS---LYDYREFAIPVLLSKIEHPDQ 284 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 RL D G L TL + N + TS LFIHRNTL YRL +I TG Sbjct: 285 EIHFQNIWDRLSQADQKGELTHTLLCYIEENGEIGETSSRLFIHRNTLNYRLRKIELATG 344 Query: 364 LDLGNFDDRLLLYVALQL 381 + FDD LY A+ L Sbjct: 345 CNPKRFDDLFKLYTAITL 362 >UniRef50_A7JU45 Sugar diacid utilization transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JU45_PASHA Length = 364 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 114/376 (30%), Positives = 191/376 (50%), Gaps = 17/376 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+ +A IV RTM+II ++NVMD+ G II SGD RIG+ H GA++ L + V+I Sbjct: 1 MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQRHTGAVIALRNDQAVEI 60 Query: 64 DDAVARHL-HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D+ +A+ V+ GINLPL G +GV+G++G+P+ +R+Y +LV M AE++++Q+ + Sbjct: 61 DENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQYAQLVKMAAELIMQQAFEL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 R REE V L++ +T + + A G D +P V ++++ S Sbjct: 121 EQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAKPLSVMVIKIHG------STA 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +LQ+L + + L A++ L ++ +L N + + + ++ + Sbjct: 175 EKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNE---------KSLIRNALNKLND-P 224 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + F+ +G SY+TA T+ +Q + ++D LP LL S W Sbjct: 225 DISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPALLHSFSHSW 284 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +A L P L D +L ++L +F N +K LFIH NTL YRL +I ++T Sbjct: 285 EAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLRYRLEKIEQIT 344 Query: 363 GLDLGNFDDRLLLYVA 378 GL N + + +LY+ Sbjct: 345 GLSFNNIEQKFVLYLG 360 >UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RG03_MOOTA Length = 390 Score = 297 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 107/391 (27%), Positives = 189/391 (48%), Gaps = 13/391 (3%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M+ L +AQ IV + M + NIN+MDA+GRII SG+ R+GE H A S+G Sbjct: 1 MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEP 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + + + QG+N+P+R +G +VGVIG+TG P+ + Y ELV AEMM+E++ Sbjct: 61 IIVRENDMNMFGVKYQGVNMPIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAV 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIV---EVDSGQ 175 L +++ E + L+ E + + + A+ GID + R V + ++ G Sbjct: 121 LREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGIDYHISRSVCLFLTYPLNDGN 180 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 V+ + + A ++ + ++LK G D ++ L Sbjct: 181 NMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILLKK-----GVKDIPTFLAQLNTLC 235 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 ++ +L V +G++ + +SY A + +G+Q P+ + + Y DL + ++ Sbjct: 236 DKLTIESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVI 295 Query: 296 DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 + + N + L L D ++ L T+ A+F++++ T+KAL +HRNT+ Y Sbjct: 296 WEVPPAKRKNFIDEILGALIEEDTFHHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIY 355 Query: 354 RLNRISELTGLDLG-NFDDRLLLYVALQLDE 383 RL +I E TG D +F + L L +A + Sbjct: 356 RLKKIKECTGYDPRGSFRELLHLGMAYLFYK 386 >UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulator n=2 Tax=Actinobacillus minor RepID=B9CXD4_9PAST Length = 369 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 204/380 (53%), Gaps = 15/380 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD +AQ IV R M+II ++NVMD G II SGD R+G+ H GA+ VL + ++++I Sbjct: 1 MKLDNILAQSIVKRAMQIIPYSVNVMDENGVIIASGDICRLGQRHLGAVQVLRKNQIIEI 60 Query: 64 DDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D+ + + H V+QGIN+P+ +GVIG++G+PE +R+Y +LV M AE+++EQ+ + Sbjct: 61 DEQLEKQWHFEVKQGINVPITYLNNNIGVIGISGKPELVREYAKLVKMAAELIVEQAAQL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 SR +EE V+ + +A + + + G+ + P + ++++ V+S Sbjct: 121 EKERWQSRYKEEFVLGVAKATLTPEQIVQQSTFFGLRYDVPYIAVLIKL------VESTA 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK-EY 241 +LQ L L+ AIV L ++V+ +P D + K+ + + + E+ Sbjct: 175 EKLQLLLTYLSHYHPKVATAIVDLQKIVIFQPL-------DQHEILKKTKFWKSYLPPEF 227 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + ++ +GN + I SY+ A T++ ++ + F+++ +P LL Sbjct: 228 AEESCQIIVGNEVSSLIDIQYSYQNAWQTLLYAEKMHLRKQLLFFEEYRMPALLADFAQS 287 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 WQA L +P+ +L D +L ++L +F N +K LFIH NTL YRL RI+++ Sbjct: 288 WQAKILFKPIYQLIEQDKKWVLMKSLQQYFFSNCDLDHAAKKLFIHPNTLRYRLERITQI 347 Query: 362 TGLDLGNFDDRLLLYVALQL 381 T L +D+ +LY+A L Sbjct: 348 TSLSFNKIEDKSILYLATLL 367 >UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholderia thailandensis RepID=Q2T8U4_BURTA Length = 402 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 152/379 (40%), Positives = 225/379 (59%), Gaps = 3/379 (0%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +D ++A +IVART+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+ID Sbjct: 1 MIDARLATEIVARTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVEID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 DA+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L Sbjct: 61 DAMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLTVE 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L +++R REE V+ L++ L WA RLGID+ + + ++ + + Sbjct: 121 LRRNARHREEFVLQLLRRTAAAAELEAWAGRLGIDVRLAHAAIVCRLSGVDADPEAGVGQ 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD--AEDHRKRVEQLITRMKEYG 242 ++ +Q+ L L A S E+V+ + R A KR+ L +++ Sbjct: 181 IEAMQSQLANEWPQLLSAKTSYRELVMFEAIDARAVRDGALATHAGKRLAALEGTLRKVA 240 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L W Sbjct: 241 TQPFALALGIALDGIDGFERSYQCALATLRVGAARTPQQATYSYYDFVLPVLLSALSQGW 300 Query: 303 QANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 QA +L PL RL + +G L TL AW+ ++ P AT++AL IHRNTL+YRL +I + Sbjct: 301 QARQLRLPLTRLLARERRSGALLDTLKAWYANDGHPGATAQALGIHRNTLDYRLQQIRDA 360 Query: 362 TGLDLGNFDDRLLLYVALQ 380 TGLDLG DDRL LY+ALQ Sbjct: 361 TGLDLGAIDDRLWLYIALQ 379 >UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacillus pumilus RepID=A8FJ59_BACP2 Length = 370 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 131/383 (34%), Positives = 204/383 (53%), Gaps = 23/383 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L T++AQ++V RTMRI+D NINVM+A G IIGSG+R RIG+ H+GA LVL+ G ++ID Sbjct: 4 LTTELAQEMVERTMRILDKNINVMNADGVIIGSGERNRIGQKHDGARLVLTSGNSMEIDY 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + L GVR GINLP+ ++VGVIG+TGEPEN+R + ELV M AE++LEQS L+ + Sbjct: 64 KASLQLEGVRPGINLPICFREQVVGVIGITGEPENIRHHAELVKMAAELVLEQSFLLERV 123 Query: 126 AQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQLGVDSAMA 183 R+ E+V LI ++ L A LG+DL++ R+ I + V S + V M Sbjct: 124 QWRQRIESEIVNQLISDSDVGDYQLKNRAAWLGMDLDKRRMAIIFQPVPSSEDAVHKMMH 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +Q +NA ++L+ + E+V+L+ ++ + V QL M+ Sbjct: 184 AIQYDKNA------DDLLGMTFRHELVLLREPISDHR------LKHVVVQLQRTMENAVG 231 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL---DSLRG 300 + V +G ++ S+ A+ ++ +GK PE YF++ L L + Sbjct: 232 GQVLVGIGTVAADISRLSLSFEHARDSLRLGKALDPEESIYFFESYQLERLFITAGVVEE 291 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + +PL + L TL+ + L+IHRNTL YRL++I Sbjct: 292 NVSWTDFYKPLTQ------EVELAHTLSIYIEEGGDLQRIVDRLYIHRNTLRYRLDKIQA 345 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 LTG D + + LY+A +++ Sbjct: 346 LTGKDPRHVKQLMELYMAQLMNQ 368 >UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFF9_9ALTE Length = 377 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 118/374 (31%), Positives = 190/374 (50%), Gaps = 9/374 (2%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD AQ IV R M++I ++NVM G II SGD R+GE+H+GA V +G + +D Sbjct: 4 LDQTTAQRIVDRAMQVIGHSVNVMTPDGVIIASGDPLRVGEIHQGARHVAVRGESLAVDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A GVR G+N+P+ + ++V V+G++GEP + + +LV +TAE+MLE + L+ L Sbjct: 64 HNAEQFPGVRHGVNVPITVGHQVVAVVGISGEPAKVLPFADLVKVTAELMLEHTALLELG 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 R E+ ++ LI W +R+G D QPR+ I+E D ++ + Sbjct: 124 QHRRRQIEDTLLALINGRTVP---QVWLERVGFDQAQPRLALIIEPAQLPGPDDFVISLM 180 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +QL+ +++ L+A V+ ++VL P + +++L + Sbjct: 181 RQLE----ISDKSLLLAQVAPQRLLVLVPVKLPGTPEHRSMTEQSLKRLQRHLPAAIYAP 236 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 +++G Y ++ Y +A TM G++ P + + Y D + +L +S WQ + Sbjct: 237 MVIAVGQYTES--NLRGCYESALATMTYGRRESPHLKTHCYSDSPVAILWESFHPGWQQH 294 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL RPL L + L RTL A+F N + L +HRNT+ YRL I +LTGL Sbjct: 295 ELLRPLHALHAHPRHLLYARTLQAFFDANGDVQQCASTLHLHRNTIRYRLKSIEQLTGLS 354 Query: 366 LGNFDDRLLLYVAL 379 + L LY+AL Sbjct: 355 PFKLPELLHLYLAL 368 >UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42195 Length = 368 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 18/380 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ+IV RT+ II N+NVMD G IIGSGD+ R+ ELH GA+ ++Q V++ Sbjct: 1 MLTRTLAQEIVNRTIDIIGYNVNVMDKDGIIIGSGDQSRLFELHAGAVEAIAQEVEVEVG 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L G + GINLP+ EIVGVIG+TG + +R YG+LV M AE+ L Q+ L Sbjct: 61 EEDLTRLKGTKTGINLPITFNEEIVGVIGITGPLDEIRGYGKLVKMAAELSLSQAFLTAE 120 Query: 125 LAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L D+R +EELV LI+AE E+ A LG+ ++ P V ++ + Sbjct: 121 LQWDTRHKEELVRQLIRAEIEDWNLFKTRADSLGLSISLPCEVICIDTPQTATRYNEERQ 180 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L+ + + V+ P + + + + Sbjct: 181 KY-ALEEHFKEYSS---LTQIQKDRYVLFLPTKKAISKD-------------KLLHIASR 223 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + V G IA SY+ A ++ G+ + R ++Y++LML V L L Sbjct: 224 FKLDVGYGTIAYTLDDIAPSYQKASYSINAGRFKKAGQRIHYYEELMLDVSLYKLSRSTD 283 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 EL L LK D L TL A+ HN + +KALF+HRNT++YRL +I+++T Sbjct: 284 MKELKGILMPLKPGDQANQLLDTLEAYIEHNGEVKQVAKALFVHRNTVQYRLQKIADITK 343 Query: 364 LDLGNFDDRLLLYVALQLDE 383 D + L LYV+L+L++ Sbjct: 344 KDPRVLEQLLELYVSLKLNQ 363 >UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacillaceae RepID=B7GLF5_ANOFW Length = 367 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 186/380 (48%), Gaps = 17/380 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A+ IV+ R+ID +I V+ G II S D RIG+ HEGA LV + + I Sbjct: 1 MLSPHLAKKIVSDVRRLIDEDIIVVATNGIIIASTDTTRIGQFHEGAFLVCQEKKKRIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 L GV+ GINLP+ G+++GVIG+TG+P+ + YGEL+ E++++++ + Sbjct: 61 KEDENVLRGVKAGINLPIFFHGDVIGVIGITGDPKKVSPYGELLKKMTELLIQENYYIEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L ++R E V +QA E +P+ E AQ IDL+ R V I + + + M Sbjct: 121 LQLEARTLETFVFEWLQAREWSPSFYERAQLFHIDLHAKRRVMIASLKETKQTISVDM-- 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +Q + + +++ +++L+ D E +++ + + + + Sbjct: 179 WKYVQTVWS--DARDVIVRWGNDRLLILQT------DDDKERTIAKIKTMQRALLDKYDV 230 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + G SY+ A+ + + KQ F +DL L + L+ + + Sbjct: 231 TLHIGCGKMGDS-KQAYHSYKQAERALHIAKQ---TGDIVFDEDLRLDMCLEDISLATKQ 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R +A ++ L TL +F +N+ T++AL IH NTL YRL ++ E T L Sbjct: 287 ELIKRTIAPFI---HDEQLLHTLRTFFSNNLSLKQTAEALHIHINTLHYRLKKVQEYTNL 343 Query: 365 DLGNFDDRLLLYVALQLDEE 384 ++ + + + LY+A++ +E Sbjct: 344 NVRHIEHVVTLYLAIRFLDE 363 >UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudomonas RepID=A6V9E8_PSEA7 Length = 370 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 186/369 (50%), Gaps = 15/369 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+I Sbjct: 2 FELDSALAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ A L GVR G+NLPL +VGV+G+TG PE +R Y ELV M AEM++EQ ++ Sbjct: 62 DEQAAACLRGVRPGVNLPLLHAERLVGVLGITGAPEVVRPYAELVRMAAEMLMEQRQMQD 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + +E + L+ AL A+ LG+ L+ PR +E+ + Sbjct: 122 ERHWQRQRQETWLRQLLDPAHGLGALAADAEHLGLALHWPRQAVFLELHEHADPLPFQAR 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L L + + A + + +PA + +E + R G Sbjct: 182 LLAALGSR-----AEHWSAALGERLVFWCRPASQA----------DALEHWLERADARGW 226 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R+ + ++ S R A+ + + R+P R L LL S R +WQ Sbjct: 227 GVARLCCSDPVHSLEALRASARAARELLDYARSRLPGQRVVGLDGHRLASLLFSQRDNWQ 286 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +L PL R+ D GLL TLA W H+ P A ++AL IHRN+L YRL RI+ ++G Sbjct: 287 VRQLLAPLQRVLDHDPQGLLAATLACWCAHDGHPQACAQALGIHRNSLRYRLERIASISG 346 Query: 364 LDLGNFDDR 372 LDLG + R Sbjct: 347 LDLGRLEHR 355 >UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMQ7_OCEIH Length = 377 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 119/381 (31%), Positives = 192/381 (50%), Gaps = 14/381 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A IV RTM II NIN+MD G II SG+ RIG+LH+GA+ V+ + R ++ID Sbjct: 4 LTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEIDT 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + A H + GINLP+ + I+GVIG+TG P+ +R Y +L+ M AE+ LEQ+ L + + Sbjct: 64 SGATHWQSSQSGINLPITFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNEI 123 Query: 126 AQDSRLR-EELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 Q+ ++R ++ L+ E++ + E A +D+ V I+ L Sbjct: 124 QQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQTTYAVIIIFTP--VLDKKHTEEV 181 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +Q+ L + + + + ++LK + +D L+ + K Sbjct: 182 EKHIQSWLNHEDEHIRLFT---NQHLILKKEIGYSNPAHIKDI------LVEKHKNSSIP 232 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL--RGDW 302 +++G+Y TG +SY+ A+ + V K P + Y+DL L +L L Sbjct: 233 NMTIAVGSYLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQ 292 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 A EL R+ T + L +TL + N + TS LFIHRNTL YRL++I ++T Sbjct: 293 SAKELTTTYQRILTESDGIQLHQTLQTYIEENGKVSITSDKLFIHRNTLTYRLDKIHQIT 352 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 G D N + L L +A L + Sbjct: 353 GKDPRNINHLLELKMASLLYD 373 >UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU51_9BACI Length = 388 Score = 275 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 104/389 (26%), Positives = 180/389 (46%), Gaps = 15/389 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L T +A IV I+ + V+D G II + DR RIG HEGA + + G+ I Sbjct: 1 MELLTGVASRIVNEVTEIVREEVIVVDQTGTIIAASDRNRIGNFHEGAKIAVDTGKHFII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 L GV+ G+NLP+ ++G VGVIG+TGEP + ++G+L+ E++++++ Sbjct: 61 RKRDVPKLKGVKAGLNLPIMIDGSAVGVIGITGEPSKVIQFGQLIQRMTELIIKEAYSSE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 LL R E V + ++ E + LGI L++P+ ++++ L A Sbjct: 121 LLDSKHRGYETFVYEWVNIQDVDFEFRERGEILGIRLDRPKCCILIDLMEKHLTHQDGSA 180 Query: 184 ELQQLQNALTTPER-------NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 + +T R + V +V+K DA+ + ++Q++ Sbjct: 181 LKRATDQTVTDYLRLAFEQNPQDFVVPWGAGRFMVVKDMNEP--VQDAKLIERELKQILQ 238 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + Q + + +G P + RSY+ AK + + + FY +L L + L Sbjct: 239 EIDRQFQFQAQAGVGTVVHVPEELRRSYQEAKRAIS---AKGHSEKVVFYSELSLELALA 295 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + + + + N L TL + HN++ T++AL IH NTL YRL Sbjct: 296 EISTMTRERLIEKVIGSIM---NEKDLMDTLDVFIEHNLRLKPTAEALHIHINTLHYRLK 352 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDEER 385 RISELTG + +D + LY+A+ ++ Sbjct: 353 RISELTGKSVKRTEDIVSLYIAVHFYHDQ 381 >UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWQ0_9CLOT Length = 355 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 113/375 (30%), Positives = 186/375 (49%), Gaps = 31/375 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV R M++I N+ + D G II SGD +RI + H GA L+ +V+ID Sbjct: 4 LSEELAQKIVDRMMKVIPYNVIITDENGIIIASGDVKRIHQFHSGAKQALNIKEIVEID- 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 H GVR G+N P+ +G ++GVIG+TG PE ++ + ELV +TAE+++ Q ++ Sbjct: 63 --CEHSQGVRPGVNSPIFFQGNLLGVIGITGVPEIVKPFSELVRVTAELLISQEYVLKNQ 120 Query: 126 AQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + +E+ + L E + E LGID+ P + ++ +S Sbjct: 121 SIQEQEKEKFLYELAYLNEGYSQGFIERGLSLGIDVTVPDIAIVI---------NSEEES 171 Query: 185 LQQLQNALTTPERN-NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L+ L+N L + +N +++ +V F RK +E+ K+YG Sbjct: 172 LKSLKNHLNSLLQNGEYCFMLNPNIIVAFISLKKPF----LNILRKSLEK-----KQYGN 222 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ V L + I+ S A + +GK + Y Y+DL +L +++ D+ Sbjct: 223 IKVGVGLSEHI-----ISVSMNQAFKALHIGKHLQKDKSIYLYKDLCFISMLANIKEDYN 277 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 E+ + L K N L TL A+ +N + T++AL +HRNTL YRL RI E++G Sbjct: 278 LKEVVKIL---KLEGNQADLLNTLIAYVYNNGEMQTTAQALHVHRNTLNYRLERIKEVSG 334 Query: 364 LDLGNFDDRLLLYVA 378 D NF + L+ A Sbjct: 335 KDPRNFIELFELFTA 349 >UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus coagulans 36D1 RepID=C1PB42_BACCO Length = 361 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 19/380 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L K+A IV ++D +I V+D G I+ S ++RIG H GA V + + I Sbjct: 1 MLLFPKIAGKIVNEVQSVMDEDIIVVDENGVIMASTQKDRIGNFHMGAQKVFQTNKKLYI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ +A + GVR GIN+P+R EG +GVIG+TG P+ + Y EL+ E++++++ Sbjct: 61 DEEMAAQMEGVRMGINMPIRFEGRTIGVIGVTGNPKEVEHYAELIRRLTELIIQETVHAE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +R E + E LGI + P + +++ G Sbjct: 121 QARSKTRGLEAYFYEWATVKAYDQHFVERGLMLGIPMQVPHICCFLKMAVPPSGETEIFE 180 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 LQ +++ S ++LK F ++R + K Sbjct: 181 RLQSYIET-----DRDMIVHWSPGLFLLLKSVEAPFS-------KERFYGQLEDFKRRFA 228 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 V +G G I +S++ A+ + V + FY+DL+L +L++ + + + Sbjct: 229 PNCAVGVGKTA-GTYVIRQSFKEAQKALKVAGK---NGGIVFYEDLLLDLLIEEVSEEAR 284 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L + +A+L+ + L TL A+ +N+ T+ L +H NTL YRL +I+E+TG Sbjct: 285 QEYLQKTIAKLQ---EHAGLAETLQAYLANNLSLKETAAQLHVHINTLHYRLKQITEVTG 341 Query: 364 LDLGNFDDRLLLYVALQLDE 383 +D + L Y+A+ L E Sbjct: 342 IDPKTAEGIALFYLAVHLAE 361 >UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FDZ6_BACP2 Length = 374 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 15/377 (3%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 +A+ IV +++ I + G II + D RIG+ HEGA L +G+ + Sbjct: 2 TLAEKIVDEVKKVLTEEIIIAQTNGTIIAATDPARIGQFHEGAYLTSFEGQKRILTKDDE 61 Query: 69 RHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 + + GV+ GINLP+ + E++GVIG+TG P ++ +GE++ E+++++ D Sbjct: 62 QRMKGVKAGINLPIYFKQEVIGVIGMTGNPIHVSPFGEILRKMTELLIQEHEFFLETETD 121 Query: 129 SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 R E V + + E LTE A RL +D+N RVV +++ + +++ Sbjct: 122 ERQLEAFVFDWLHLPETAIDLTEKAARLQLDVNMQRVVVLIDCHDESFMKQD---QYKKV 178 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 + L + +V +++L+ + N D + ++R+ + + + + Sbjct: 179 KEMLHLTHQEMIVRWGHARFLLMLQTSAN-----DRDTLQQRLFHIHAALTARSTSKVLI 233 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 G G + +S+ A + + P F +DL L + ++ + + + L Sbjct: 234 GAGKPAAG-QMMKQSFHQAFRALKMANADTP---IVFDEDLTLELFIEEVSQETKEVFLD 289 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 R + L L +TL + T++A+ +H NTL YRL RI +LT LD Sbjct: 290 RTIVPLLPY---PELVKTLRVLMTSDCSLKYTAEAMHVHINTLHYRLKRIQDLTTLDPKR 346 Query: 369 FDDRLLLYVALQLDEER 385 D +L Y+AL L + Sbjct: 347 MQDAMLFYLALMLLDHH 363 >UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EML2_OCEIH Length = 380 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 177/376 (47%), Gaps = 16/376 (4%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 +A I+ +ID I + D G II S + RIG+ HEG+ +V+ + + I +++ Sbjct: 6 LADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLTI 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 L GV+ GINLPL ++GVIG+TGE E ++ +GE+V E+++ ++ + + Sbjct: 66 DLQGVKTGINLPLFFNKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFEH 125 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 R E ++ +L+Q+ + T L + A+ LG+ L + V I+ ++ + + L+ Sbjct: 126 RAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSKQVIILVINEIDSTLQKQI--WHYLK 183 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 + + +++ + + + + + + L + + + + Sbjct: 184 DLI---PEKDILTRWGNNRLFWMHTLSSIKDQIKPD----FLNTLQKACENHFSIDLNIG 236 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 +G+ + RSY A + ++R F+ DL L + L + D + + R Sbjct: 237 VGDTA-SASDLYRSYEEALIAINY---FPDDTRISFHTDLQLELCLQDISDDTKKEYIQR 292 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 + L + L +TL + + T++ALFIH NTL YRL++I + TGLD F Sbjct: 293 TIGTLI---EHNQLLQTLHVFIENESSLQKTAEALFIHINTLHYRLSKIHQFTGLDPKRF 349 Query: 370 DDRLLLYVALQLDEER 385 D LY+A+ +E Sbjct: 350 KDLTNLYLAITFLDEH 365 >UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus RepID=Q81GB0_BACCR Length = 371 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 114/383 (29%), Positives = 187/383 (48%), Gaps = 26/383 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A IV R+I NI +++ G II S D ERIG+ HEGAL Q + V I Sbjct: 1 MLFPDLANKIVREVRRLITENIIIINIEGVIIASTDTERIGQFHEGALRCAKQKKTVIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 R L GV+ G+NLPL E++GVIG+TGEPEN+ +YGE++ E+++ ++ + Sbjct: 61 KEDERRLQGVKAGMNLPLLFHDEVIGVIGITGEPENISRYGEILRKMTELLIHENYFLEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L + R E V + +Q E +P+ + A+ LGIDL + + + + + + + Sbjct: 121 LELEHRSYEAFVFDWLQNTEWSPSFLDRAKTLGIDLYKKKQLILFSIGKNDTMLQRKI-- 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ- 243 Q ++N LT E + ++ + F + A +++ Q + R+K+ + Sbjct: 179 WQHIRNILT-------------KEHLFVRWGNDRFILFTAMSSKEQTYQFLKRLKQDCET 225 Query: 244 ---LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + +G T P +++ Y A + V + + F +DL L + L + Sbjct: 226 LFSIPLYIGIGQTVT-PNNMSICYEQALRALSVS---LETKKIVFNEDLRLEMCLQDISV 281 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + L R + L + L +TL + +N T+K L IH NTL YRL +I E Sbjct: 282 ETREQFLERTIENLLSF---PELMQTLRLFVDYNQSYKQTAKQLHIHINTLHYRLKKIEE 338 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 TGLD F D +LY AL L + Sbjct: 339 HTGLDPKQFKDLNVLYFALLLLD 361 >UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=Pseudomonadaceae RepID=A4XS86_PSEMY Length = 371 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 185/371 (49%), Gaps = 15/371 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+I Sbjct: 2 LELDSTLAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D A L GV+ G+NLPL +++GV+G+TG+P+ +R Y ELV M AEM++E L Sbjct: 62 DAQAAACLRGVKPGVNLPLLHAEQLIGVLGITGDPDIVRPYAELVRMAAEMLVEHRVLQA 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +E + L+ ++ +L A+RLG+ L PR + ++ + + Sbjct: 122 ERHWQRHQQEAWLRQLLDPQQRLSSLEVEAERLGLQLTWPRQICLLRLVEEGDPLPRQAR 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L L + + +L+A + E++ +P + + E Sbjct: 182 LLAALGS-----KSEHLLAPLGRHELLWCRPYSAGRDD----------HAWLAQADEREW 226 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++L + + ++ + G R PE R ++L LP LL + R W Sbjct: 227 GIRSLALSDPLHDLAELRQASLVLRDLQAYGLARFPERRLLPLEELRLPTLLHAQRHSWL 286 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 PL R+ D +G LR TL AW H+ Q ++AL IHRNTL YRL RI EL+G Sbjct: 287 LQGWLAPLRRVLAQDPHGTLRATLEAWCAHDGQVQLCAQALGIHRNTLRYRLERIGELSG 346 Query: 364 LDLGNFDDRLL 374 LDL D RL Sbjct: 347 LDLDRLDQRLQ 357 >UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoanaerobacteraceae RepID=B0K2X2_THEPX Length = 381 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 97/386 (25%), Positives = 180/386 (46%), Gaps = 15/386 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L + Q IV R M I+ NIN+MD +G II SGD RIG HEGA + S+ V ID Sbjct: 1 MLSHEDYQKIVNRLMNILGKNINIMDTKGVIIASGDSTRIGSFHEGAKIAASRKIDVIID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 D+ + G ++GIN+PL GE++GV+G+TGEP+ + +G ++ E+M+++ Sbjct: 61 DSNIEYYKGTKKGINIPLFYNGEVIGVVGITGEPKEIIGFGRIIKELVELMIQEYENKKY 120 Query: 125 LAQDSRLREELVMNLIQ----AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ---LG 177 A SR + ++ E L A+ +G D+ + R + + ++ L Sbjct: 121 EALHSRAMVSFIKEILNHPNIGHEEEKILKSRAKLIGFDIKKQRSLIVADIRGFNDFILS 180 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + ++Q+L+ + ++ L + E+V +++ ++L Sbjct: 181 KNLKEIDIQELKENIVEFIKSKL----NHDEIVFNFNEDRFVIMLSSKNPMPFCKELQEG 236 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 +K+ L + +G + S+ A + +G++ + ++D + +L+ S Sbjct: 237 VKKKFNLSCIIGIGPDCKDIKNYHTSFTIANKLIDIGRKI--DKDILDFKDYKIELLIHS 294 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L + L + N + T+ +F + SK LFIHRNTL YRLN+ Sbjct: 295 LSINDSIIFFEEYKDILNS--KNKDIINTIKVYFESGMNINLASKKLFIHRNTLTYRLNK 352 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDE 383 I E +D+ N + +Y+++ +++ Sbjct: 353 IKEEFNVDITNPYVCMKVYISILINQ 378 >UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLC5_9FIRM Length = 368 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 96/385 (24%), Positives = 174/385 (45%), Gaps = 27/385 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + + + +A IV + + NIN + G II S D RIG HE G + Sbjct: 4 IMSYPISRPLASQIVDAVSDVCEKNINFITPDGEIIASTDSSRIGTYHEIGRRAAQSGTL 63 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ++I G + GINLP+ GE++ +IG++G+P+ + KY L +++ +S Sbjct: 64 MEI--PQDSLYPGTKAGINLPVYHNGELLAIIGISGDPKEVSKYAHLAERITRLLVCESE 121 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDS--GQLG 177 L + R L+ L++ TP L L ++L P + ++++ Q G Sbjct: 122 GNLHLRDLEQKRGYLIQKLLKGAPITPEDLETLPSDLNLELQTPSRILLIQLGHQFPQTG 181 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + E+ L +L L E + + P E + ++ Sbjct: 182 IPAVEPEIYHLFRSLEL----TLYCFQYPREYLAILP----------EPKLTNCRETLSH 227 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 E + + +G T P + SY+T + + + + S C F+ L L +LL Sbjct: 228 FGEKHKGSLCMGIGK-CTSPQQLMHSYQTCQIALKSAQ--LSGSSCVFFDQLYLELLLSD 284 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + D Q +R ++ L + D LL ++ N+ +A + L++H+NTL+YRLNR Sbjct: 285 VSSDLQQEYFSRTVSHLSSEDRELLL-----VYYEENMSLVAVCERLYLHKNTLQYRLNR 339 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 I ++TGL+ +F+D ++LY+ L+L Sbjct: 340 IRKVTGLNPRDFEDAVILYLGLKLS 364 >UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2C8_PSEAE Length = 361 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 21/381 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD +AQ+IV R M I+ N+NVMD++G IIG+G+ ER+ HEGA LVL+ R V+I Sbjct: 2 FDLDHSLAQEIVDRAMAILPRNVNVMDSQGLIIGTGEAERLYTRHEGAQLVLANSRAVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+A A L GV++G+N PL L+G+++GVIG++G P+ +R + E+V MTAEM++ Q Sbjct: 62 DNAAAGALRGVQEGVNFPLCLDGQVIGVIGVSGAPDEVRTFAEMVRMTAEMLVAQRNDQQ 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + E+++ ++ + ++ AQRLG+ + R ++E+ + + Sbjct: 122 HRIWLQKRIEDVLTAILLSGQSAQRAIVEAQRLGLRPDLRRTAVLLEMATPE-------- 173 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +L + + + +V P R D R+RV + G Sbjct: 174 DLDLAAEWIRHQAADAWCVPLHALGLVWCPP------RSAPPDFRERVAR-------AGI 220 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 RV++G T ++ M + +MP+++ +PV + R + Sbjct: 221 PFTRVAIGTPNTETKALHSEVEQLSDLMAYAQAKMPDAQWLDLAAHRIPVAVWRFRSENG 280 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +LA P L+ D+NG LRRTL WF H A ++AL IHRN+L YRL RI++++G Sbjct: 281 FLQLALPYVALQQEDSNGQLRRTLKCWFEHGSDGQACAEALNIHRNSLRYRLERIADISG 340 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 +DL + LY+A+ L E Sbjct: 341 VDLASPKGTTELYLAMILAAE 361 >UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus subtilis group RepID=YSFB_BACSU Length = 368 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 177/381 (46%), Gaps = 16/381 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L +A+ I+A ++ + + +++ G I+ + ER+G+ HEGAL+ + R V I Sbjct: 1 MFLQPLLAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGALICAKERRSVII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 L GV+ GINLP+ + +++ V GLTGEP ++ +GEL+ E+ +++SR + Sbjct: 61 TKEDETRLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQPFGELLRKMTELFIKESRHLE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 R+ E +++ +Q +E +P+ E AQ LG+DL+ R + +++ G + + Sbjct: 121 QSQWRERMLESFMIDWLQLKEWSPSFLEKAQLLGVDLSSRRQMILIQ------GYEWSPH 174 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +++Q+ + + +L +++ + +++ + + Sbjct: 175 DIEQMARSWKSSYPADLFIRWGNERILI---NHEVPQHEQRDRLLRKILHICSFANTASS 231 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 G S+ SY A+ + V +R F +DL L + L + + Sbjct: 232 QYTAAGAGRAVAS-SSLTDSYEQAEKALAVSLKR---KTPIFEEDLKLDMCLTEISPGTR 287 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 R L + + L T+ +F H++ T++ + IH NTL YRL + +LTG Sbjct: 288 NEFPQRVLGKAL---EHQELMNTIRTFFHHDLSLKQTAEDMHIHINTLRYRLAKAEQLTG 344 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 L +D + +YVAL ++ Sbjct: 345 LRFDRTEDVVTMYVALYFLDQ 365 >UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB72 Length = 398 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 8/381 (2%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ+I RI N+ + D +IG GD R+G +HE +L V+ GR Sbjct: 10 LTPQLAQEIAHDIGRITGFNVLITDPGAVVIGCGDLSRVGTVHEASLEVVRTGRPAIHTA 69 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A + GVRQG++LP+ + E++G + LTGEPE + ++G +V AE++LE++ L+ Sbjct: 70 GQASRMRGVRQGMSLPITVGEEVIGTVCLTGEPEEVDRFGLVVRRQAEILLEEAALLRSR 129 Query: 126 AQDSRLREELVMNLIQAEE---NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 R ++ V ++ + + A+ A LG+ R ++EV + G +AM Sbjct: 130 MLHERAVDDFVRDIALYDPEVVDAGAVDARAVELGLAPGAARAALLLEVRAADEG--AAM 187 Query: 183 AELQQLQNALTTP-ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + + L+ +R ++ + VVL A R QL++ + E Sbjct: 188 SRITVLRTVREVFRDRQDVAGEQAAGRYVVLAAAYGE--RTAPGRLADACGQLLSLLHER 245 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 L R+++G TG + SYR A T + G P R Y +L +P LL S Sbjct: 246 HGLDGRMAVGEPGTGTTGMHHSYRDAATALRTGPAVFPGDRVYTASELRIPHLLGSTPRH 305 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 +A L L+ + LR TL W + +++ L IHRNTL YRL +I +L Sbjct: 306 GRARFADAVLGDLRGQPDWPTLRETLIGWAEGGFHLVRSAERLHIHRNTLLYRLEKIGKL 365 Query: 362 TGLDLGNFDDRLLLYVALQLD 382 +G + + +Y+A D Sbjct: 366 SGKRVREPVQAIEMYLACLTD 386 >UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B5K4_9BACI Length = 372 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 99/383 (25%), Positives = 175/383 (45%), Gaps = 17/383 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A+ I+ ++ I V++ G I+ S +R+G HEGAL + + I Sbjct: 1 MLLPALAEKILREVRGVLKEEIIVVNTDGIIVSSTSPDRVGAFHEGALQSVKKRDKRIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L GV+ GINLP+ + E+ VIG+TG+PE + YGE++ E+++ ++ Sbjct: 61 ADDEKKLKGVKAGINLPVFFQKEVAAVIGITGDPEKVAPYGEIIRKMTELLISENFYSEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + SR E V + +Q + + + A L +D R+V I E + + Sbjct: 121 IDWQSRALEGFVFDWLQERGHGSSFIDRALMLKVDTRLDRLVFIAEFLEPE-----KIPS 175 Query: 185 LQQLQNALTTPER--NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + Q L+ PE+ N+L +V L + ED RV + + + Sbjct: 176 REIWQRLLSWPEKNSNDLFIRWGHDRIVALFAHHSEEHIQRLED---RVSRYYSYLDRSS 232 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 G +++RS+R A+ + K+ F ++L L +L+D ++ + Sbjct: 233 GSPLSGGAGQPAAS-SALSRSFRQAERAVKAAKKA---RGLRFDKNLTLEMLMDEIKPET 288 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + + + R + L+ + + TL FR N T++++ IH NTL YRL +I +LT Sbjct: 289 KLDYIKRTIGPLQQ---HPDVLATLKELFRQNHSLKKTAESMHIHINTLHYRLRKIEDLT 345 Query: 363 GLDLGNFDDRLLLYVALQLDEER 385 GL GN +LY+A L +E Sbjct: 346 GLGTGNAQQLFILYMACLLLDEH 368 >UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LH0_SYMTH Length = 405 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 17/385 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + +++AQ I R + I+ N+N+MD G I+ SGD RIG H+ A V+ R + Sbjct: 24 ITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTNRRL 83 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 DI GVR G+NLP++++G VGV+G+TG P+ + +GEL+ + L Q R Sbjct: 84 DIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRA 143 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L RE + L+ ++ + + A + + V + + G G+ Sbjct: 144 EELERVRLMARESFLRTLLTSKGPIGERMVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSR 203 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AE + L L + + + V+ L + E Sbjct: 204 IWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDPP-------------RDLSAVLLE 250 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 F V+ G G + RSY TA + G+ Y+ + + L +L Sbjct: 251 ALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRL-LTTLPP 309 Query: 301 DWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 A +A L L D+ LLR T+ A+ + + L IHR+TL +RL I Sbjct: 310 SEVAEFVAGMLGGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAI 369 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 +E +G D +++ L LY+A+QL+ Sbjct: 370 AERSGTDPRSWEGLLSLYLAIQLER 394 >UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SH42_RHOSR Length = 386 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 176/387 (45%), Gaps = 12/387 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ I +I N+ + DA G ++GSGD RIG+ HE ++ V+ R++ Sbjct: 1 MLSEALAQQIANEITDVIGFNVLITDAAGTVVGSGDERRIGQFHEASIEVIRARRMIAHS 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A R L G G+ +PL ++G++VG IGL+G PE + ++G +V E++++++ + Sbjct: 61 AADVRDLVGSLPGVTIPLVIDGDVVGTIGLSGSPEQVEQFGLVVKRQTEILMQEASRIGT 120 Query: 125 LAQDSRLREELVMNLIQAEENT---PALTEWAQRLGIDLNQPRVVAIVEVDSGQ-----L 176 R EEL+ ++ +T + A LG DL PRV+ ++ DS Sbjct: 121 RLTYERAAEELLRDICDWHRSTFTEAQIVRRATGLGYDLRLPRVMVLISYDSHSDDVAVQ 180 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 G + L+ +Q+A + +LVA ++ + V DA R + ++ Sbjct: 181 GQPVSHRVLRAVQDAFDSAT--DLVAPLARQVVAVTTVVTARTPAADA-ALTDRCRKYVS 237 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 ++E G RV +G+ G + S + A + +G P + Y L + Sbjct: 238 LVRERG-WDTRVGIGSIAHGVEQLNLSSQDAYDALRLGAVLDPRGQVYDIDRFRLHQAVS 296 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + L L T ++ L+ TL AW ++ L +HRNTL RL+ Sbjct: 297 VIPAETRDRLSRAVLGALATDNDWPHLQETLIAWGECGFNSSRAAQRLHVHRNTLANRLD 356 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDE 383 +I+ L G L + LY+A + + Sbjct: 357 KIARLLGRPLDEPGLGMTLYLACVVAQ 383 >UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCX7_BACSK Length = 371 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 22/380 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ I+A ++I ++ +++ G II S D R+G HEGA L +++ R I Sbjct: 1 MLTDVLAQKIIAEASQLIKEDLIIVNRDGYIIASTDPNRVGTFHEGASLCMAERRKRLIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A HL GV+ G+NLP+ + ++ GVIG+TGEPE + YGEL+ E++++++ +M Sbjct: 61 ANDATHLKGVKPGLNLPIVVFQQVAGVIGITGEPEQMEPYGELLRRMTELLIQEAHMMEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + +R + V ++A T L A +D+ + + ++E + +A+ Sbjct: 121 MQWQTRALQGFVQEWLEAGALTEPLKRQAAAHSLDVQTEKQIVLIETGLEESIHWRGLAQ 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ +R ++AI + V+L + + + V L + G Sbjct: 181 WRE--------QRKGMIAIPWERKKVLLVCSPQTETA-----LKATVHTLAETLAIGG-- 225 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + G P I +SY A+ +V ++ +R F +L L + ++++ D +A Sbjct: 226 SWWGGAGRALP-PDEIKKSYAEAQAALVAARK---TNRFVFEHELKLELCVEAIPADTKA 281 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R L K + + L TLAA+ ++ T++AL +H NTL YR ++ + TGL Sbjct: 282 RFVERVL---KKVSDEQELLGTLAAFLENDQSLKRTAEALHVHINTLHYRFQKLKQHTGL 338 Query: 365 DLGNFDDRLLLYVALQLDEE 384 D+ +D +L Y+A E+ Sbjct: 339 DVRKSEDFVLFYLAHLFLED 358 >UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5T1_9BACT Length = 449 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 100/406 (24%), Positives = 171/406 (42%), Gaps = 24/406 (5%) Query: 1 MAGWHLDTK-----MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVL 55 +A W +++ AQ+I T I+ ++ + D +G IIG+ ER+G HE + V+ Sbjct: 37 VASWKSESEKVLSGCAQEIARSTAGIVGYDVIITDMKGIIIGASRAERLGCHHEASDEVI 96 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPL-RLEGEIVGVIGLTGEPENLRKYGELVCMTAEM 114 G VA + G G+ P+ L G +VG + +TGEPE ++ + +V E+ Sbjct: 97 RTGHSSATSAEVAATMSGTLPGVTHPIASLNGTVVGTMAITGEPEAVQPFALIVRKQIEI 156 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQ---AEENTPALTEWAQRLGIDLNQPRVVAIVEV 171 +L + L ++LV ++ + + AL A GID + E+ Sbjct: 157 LLREQERFALTVNRESSLQDLVQEMVSFAKGDGDEEALAARAGSYGIDARWYYLPLSAEL 216 Query: 172 --------DSGQLGVDSAMAELQQLQNAL------TTPERNNLVAIVSLTEMVVLKPALN 217 + +G + A E+ +L+ + +R L V P + Sbjct: 217 YQLGRIAAGATGMGREVAEQEIYRLKADVLVEIRAAFGDRRALCTGTVAGRFAVFWPLGS 276 Query: 218 SFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQR 277 E+ R QL+ R+ G + + GN G ++A+SYR A + +GK+ Sbjct: 277 EPDEEAIEEAVNRGRQLVDRLGSRGH-KIAIGFGNPARGIRAVAQSYRDAGRALAMGKKL 335 Query: 278 MPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQP 337 Y + + LL + ++ A + L+ + L+ T+ W Sbjct: 336 RRGPGVYRINEFRIEELLSLVDRRNRSRFAAPITSPLRAQSDWEDLKNTVRVWCDSGFSL 395 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + SK L +HRNTL YR +I LTG +F L LY+AL +DE Sbjct: 396 VDASKRLAVHRNTLLYRQEKIERLTGRKTRDFRAMLELYLALVIDE 441 >UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMV9_9BACT Length = 391 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 173/382 (45%), Gaps = 11/382 (2%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDIDDAVA 68 +AQ++ +I ++ + D +G IIG D +R G L+E + + GR + V+ Sbjct: 5 IAQELAKSISEVIGYDVLITDVKGVIIGCSDPDRGFGTLNESSRIAAETGRGSVDTEEVS 64 Query: 69 RHLHGVRQGINLP-LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 L G R G+ P + +G ++G + +TG+PE + + +V AE+ L + + + + Sbjct: 65 HRLKGTRPGVTYPMVGPDGRVIGTVAITGDPEKVTPFALVVKRQAELYLRERIMQREVME 124 Query: 128 DSRLREELVMN--LIQAEENTPALT-EWAQRLGIDLNQPRVVAIVE---VDSGQLGVDSA 181 R + LV + L+ ++ + P L A+ G D + V VE + Sbjct: 125 RERNLQALVSDVFLLNSKVSDPELLLNRAEHFGYDRSSEYVALSVETVRLRDSAGAGVYR 184 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 L +L++A+ P +L+A + + VV P G +E + + + Sbjct: 185 DPVLARLRDAMGGP--RSLMAAMKMDLYVVFLPLSGKLGADLSERIGEIWNGVRKSL-SS 241 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + V +G+ G +ARS + A+ + +G++ P R Y + + LL Sbjct: 242 MGIEAAVGIGSGAMGIEELARSCKEARLALRIGRKVAPGVRFYPIKGYRVEELLFFSPRS 301 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + R L+ L+ + LR TL AW S++L +HR+T+ YRL +++ + Sbjct: 302 LTESMSERELSPLEGRGDTEELRDTLTAWCESGFNVAEASRSLHLHRSTVNYRLEKLASI 361 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 +D+ +F + LY A+ LD+ Sbjct: 362 FHVDVRDFREMSRLYWAISLDK 383 >UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=Synergistaceae RepID=C9M8C5_9BACT Length = 405 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 92/385 (23%), Positives = 162/385 (42%), Gaps = 14/385 (3%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDIDDAVA 68 +AQ++ R I ++ + D G IIG D R IG L+E V + G+ + A Sbjct: 5 IAQELAETIARTIGYDVVITDLAGIIIGCSDPTRGIGTLNEACAQVAASGQPRWESEEDA 64 Query: 69 RHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 + L G + G+ P+ ++ ++ G I LTG PE +R + LV AE+ L++ L + Sbjct: 65 KLLKGTKPGVTYPILGVDRKVAGTIALTGAPELVRPFALLVKTQAELYLKERIAAAELQE 124 Query: 128 DSRLREELVMN--LIQAEENTPALTE-WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 R + LV + L + N P + E A+ +G + V + S S A+ Sbjct: 125 RERNFQALVSDIALFKQGINDPKIYETRAELMGYTPSSSYCVVALNETSQPDEGSSHGAD 184 Query: 185 LQQLQNALTTPE-----RNNLVAIVSLTEMVVLKPAL---NSFGRWDAEDHRKRVEQLIT 236 Q L+ +L S V ++ R +D +KR E L+ Sbjct: 185 YSAQQRLLSEIRTCFGNPGDLCGSTSPHRFVAFCAVNCDDDTSSRSVLDDVKKRCETLLN 244 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 R+ +L ++ +G ++ SYR A + +G + + LL Sbjct: 245 RL-TAAKLPCKIGIGGIHRDIDGLSASYREALAALQMGGNADSSEPIHCISGYRIEELLL 303 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 Q + R LA L ++ L+ T+AAW + ++ L +HR T++YRL Sbjct: 304 KSEMTLQDALVERELAPLFARNDGDELQDTIAAWCESGFSVVRAAELLHVHRTTVDYRLE 363 Query: 357 RISELTGLDLGNFDDRLLLYVALQL 381 ++ + ++ +F + LY A+ L Sbjct: 364 KLQRILSVEPRDFREMSRLYWAVVL 388 >UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1G6_9BACT Length = 432 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 35/414 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L K AQ+I + T II N+ + D GRIIG+ ER+G+LHE +L V G Sbjct: 7 IDEMTLIQKCAQEIASSTAAIIGHNLIITDVDGRIIGASQTERVGQLHEASLEVARTGTA 66 Query: 61 VDIDDAVARHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 + AR G G+ P+R L G VG + LTG P+ +R +G +V E++L + Sbjct: 67 SETTREQARLFRGTLPGVTFPIRNLNGRTVGTMALTGSPDEVRPFGLIVKKQIEILLRER 126 Query: 120 RLMHLLAQDSRLREELVMNL---IQAEENTPALTEWAQRLGIDLNQPRVVAIVEV----- 171 L + + + L+ +L + N L A LG D + + +V++ Sbjct: 127 ELHVYSSSRESIIQNLIHDLETFVPGVGNETMLQSRAIELGYDPSLFYIPIVVDLYQFGR 186 Query: 172 ------------DSGQLG---VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 DSGQ+ ++ A L +++ + P N+ +I V L A+ Sbjct: 187 YALAVRRECRDGDSGQVEMRILNVKKAILAEMRGVFSHPH--NISSISGNNRFVTLH-AV 243 Query: 217 NSFGRWDAEDHRKRVEQ-------LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKT 269 R D + + + Q L+ R+++YG L+ + +G+ +++ S A+ Sbjct: 244 KDADRADPQHEKAALAQVVELSRSLLDRLEDYG-LKAAIGIGSPAHSIAALSISCHEARK 302 Query: 270 TMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAA 329 +++GK+ Y D + ++ ++ + + L+ + L +T+ A Sbjct: 303 VLMLGKKFKQRPDVYCIADFRMEDVISTIDAPVRIRFIKALTGNLRAKSDWPELEKTIRA 362 Query: 330 WFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 W + T++ L IHRNTL YRL +I LTG D+ +F Y AL L + Sbjct: 363 WCESGFSLVGTARRLHIHRNTLIYRLEKIERLTGEDIHSFPACFNFYFALLLGQ 416 >UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I4U8_VIBHO Length = 356 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 177/354 (50%), Gaps = 15/354 (4%) Query: 29 MDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEI 88 MD +G II S D R+ + HEGA+L LS+ R ++I + + ++ GV+ G+NLP+ + + Sbjct: 1 MDEQGYIIASTDHSRLHQRHEGAILALSEKRTIEITEEMQHNMWGVKPGVNLPIFFKEQA 60 Query: 89 VGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA 148 +GV+G++G+ E +R+YGELV M AEM +E + + LL +EE V+ + E + Sbjct: 61 IGVVGISGKLEAVRQYGELVRMAAEMTVEHAHELDLLRWSETRKEEFVLQWLYHETHEDH 120 Query: 149 LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTE 208 L A +L ++L+ P VA+ + + + L LT + L A S Sbjct: 121 LRSLAGKLNVNLDTPYGVALCQHP--------IDVDQRTLTTQLTPIHPHILKASCSGVI 172 Query: 209 MVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAK 268 +VVL P + K +++L+ ++ + R+ + + I ++ Sbjct: 173 LVVLVPLQGKKPETLNQYWEKNIQRLLKQLPVANRCRWV--FSDPVSDIDEIRNTFFGLC 230 Query: 269 TTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLA 328 + + + + ++R D L LL+ + W+ ++ L ++ + L TL Sbjct: 231 SVLNGLQDNIHQARL---SDYPLAALLNPVSESWKLRQINNILRPIEG--KSPDLLTTLR 285 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 AWF HN T+ +L++H NT+ YRL +I E TGL L NF + LLY AL + Sbjct: 286 AWFIHNSDIDKTASSLYVHPNTVRYRLKQIEECTGLSLTNFQQKGLLYAALTIK 339 >UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clostridium RepID=B2V472_CLOBA Length = 354 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 33/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++AQ IV + M +I N+N+MD G IIGSGD RIG LHEGAL L + V+I Sbjct: 1 MLSKELAQSIVNKVMEVIPYNVNIMDEDGIIIGSGDVSRIGSLHEGALNALKNKKTVEI- 59 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + G+N+P+ +I+GVIG+TGEP+ + +G++V +TAE+++ Q ++ Sbjct: 60 ---FKDYEYAKAGVNIPILFRNKIMGVIGITGEPKIVSPFGKIVSITAELLISQEYTLNQ 116 Query: 125 LAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +L EE + + EE T + L ID+ R V IVE D +L + Sbjct: 117 HIIKQKLIEEFIYEWLNINEEYTEEFVQRGMSLEIDIRIKRFVIIVEYDKSKLNEVNKFI 176 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + +N + +N +A++ +E + ++ + +++E Sbjct: 177 DKNLKENEYSINISSNKIALLLKSERIT----------------NNKIIKFYDKIQE--- 217 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 L ++ +G +I S + +G + + Y Y ++ L + Sbjct: 218 LSIKIGVGRVHN---AIINSLIDGVNALNIGNKLYEDKSVYVYDEI---KFLHKMSLLIN 271 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + L T + ++N + T+ + IHRNTL YRL +I E+TG Sbjct: 272 GKYEKEIIDDILEEAMGKELLETFLIYMKNNGERAKTANEIHIHRNTLNYRLEKIEEVTG 331 Query: 364 LDLGNFDDRLLL---YVALQLD 382 L ++ D L YV +L Sbjct: 332 LKFNDYLDLFQLITAYVGYKLY 353 >UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JN28_FUSVA Length = 363 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 86/380 (22%), Positives = 174/380 (45%), Gaps = 19/380 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ +A +I+ + II ++N +D G II S +R G H L + + + I Sbjct: 1 MNISVSLATNILNKMKEIIHQDLNYIDKSGIIIASTAPDRTGTFHAAGLKSIKEKTPIII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + HG R+GIN+P+ IVG IG++G+ + KYGE++ M E++++++ + Sbjct: 61 NSDD--EFHGSRKGINMPIYFNDTIVGAIGISGDKNEVEKYGEIIKMMTEILIKEAWIKD 118 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + + + ++ ++ D P V + +++ + + Sbjct: 119 SDIRAKEINRTFIERIVLG-------YDYDFFPTTDFTFPYAVVVGKLNKNNSFLVND-K 170 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L+N+L+ + N + +S E+++L + + E+ K + QL ++ E + Sbjct: 171 IYDILKNSLSHNKNN--IYTISRNEIIIL------YHFYKDENISKTIFQLQEKLLEKTK 222 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 L FR +G S+ SY+ AK + + + Y+ + L + +L+ Sbjct: 223 LDFRFGIGTKAFEYSSLKESYKAAKEILNFMIKFSIKKSVSEYEKMDLEFIFLNLKKSDI 282 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 N R L + + ++ +N L TS+ALF+H+NTL+Y+LN+I +L+G Sbjct: 283 ENFTNRILKNFTPKEIE-EFSLLMNSYEENNGSILHTSEALFMHKNTLQYKLNKIKQLSG 341 Query: 364 LDLGNFDDRLLLYVALQLDE 383 D + D ++L +A +L Sbjct: 342 YDPRHLKDFIVLSLAFKLQR 361 >UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0Z8_EUBE2 Length = 390 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 96/386 (24%), Positives = 177/386 (45%), Gaps = 17/386 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 H+ A IV +++ NIN+MD G II S D+ RIG+ H GA ++S+ + + Sbjct: 1 MHISKNSATQIVEEISKLVKQNINLMDETGHIIASRDKSRIGDFHYGAYKIISEN-LEEY 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G+++GINLPL L+G IVGVIG+TG E + G+L+ E++L +SR + Sbjct: 60 YIDEDDLSKGIKKGINLPLELDGGIVGVIGMTGGYEEVITSGKLLKKMTEILLMESRANY 119 Query: 124 LLAQDSRLREELVMNLI-QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + R+R + L + LGID+N+PR V I +D DS Sbjct: 120 RQLMNKRVRNAFYEEWLINGGYKNADLEDRGMALGIDINKPRRVFIASIDELDNLKDSQQ 179 Query: 183 AELQQLQ---NALTTPERNNL-VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 + Q + + +RNN + + + +++ D E+ K +L + Sbjct: 180 GQSQIAKFENDVDAFLKRNNYKMHFRNASRQIII------IDNMDTENVVKFAGELAGYV 233 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 E + + + + + + +Y A ++ + Y+D+ L +L+ ++ Sbjct: 234 WEKDKFELNIGIDSAQS--YDMHEAYVEAHRAWTAAAEKH--EQIICYEDISLELLISNV 289 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + + L + + ++ L A+F + L+IH+NTL+YR++++ Sbjct: 290 PTEIKLEYLKKVFKDMD-YNDVCENIALLKAYFNAQGSIQKAADNLYIHKNTLQYRISKL 348 Query: 359 SELTGLDLGNFDDRLLLYVALQLDEE 384 E+TGLD+ + LY+A + +E Sbjct: 349 KEITGLDVRKPTESPALYLAYIITDE 374 >UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM58_9FIRM Length = 375 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 88/383 (22%), Positives = 162/383 (42%), Gaps = 14/383 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + + + IV +II ++ MD II D +RIG+ HE + +L +G ++ Sbjct: 1 MQISSSLGMSIVTEVKKIIHEDLTFMDKSCHIIACTDEKRIGDFHEASRKMLDEGLK-EL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G R GINL L +EG++VGV+G+TG E + +YG++V E++L +S L Sbjct: 60 TVPDDDTYQGTRSGINLTLEIEGQVVGVVGITGNEEEVSRYGQVVKKMTEILLLESYLKE 119 Query: 124 LLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 ++ R + + +E PAL + GID+ PR A++ + Sbjct: 120 EKIRERSARNRFLQEWLMTDELRMNPALVDEGISQGIDVMVPRRAAVLGHTGNPIMSQED 179 Query: 182 MAELQ-QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + ++ +++ L RN V+ S +VL E K + Q+ +++ Sbjct: 180 VERIEHRIRRILKEDMRN--VSGSSGGSFIVLMS------ERSDEMAAKLIAQIQADIEK 231 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 R + + G + Y A + G +S FY ++L + ++ + Sbjct: 232 ECGYRLIAGVDSRTISGGQLKAGYFRAIKALN-GAAVQGDSGVAFYDSILLEIFINDIGQ 290 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + R + R L + + ++ L++H+NTL+Y+LNR+ E Sbjct: 291 ATKEEFIQRVFKG-CSEKRMKEAVRILRVLYECDGSINQAAEQLYLHKNTLQYKLNRLKE 349 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 TG D Y+A+ E Sbjct: 350 KTGYDPRKLSAAPYYYLAIAFYE 372 >UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R8_STAS1 Length = 405 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 20/374 (5%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++A IV T++ ++NIN+M+ G II S D+ RIG++HEGA VL+ G +V + + Sbjct: 50 LTDELAALIVEETVKRTNSNINIMNFNGEIIASFDKRRIGQVHEGARKVLASGDIVILSE 109 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 +L G + GINLP+ + +VGVIG+TG+P L +LV M+ E++L Q+ + L Sbjct: 110 EETSYLQGTQPGINLPIIFQDNVVGVIGITGDPSALVHVADLVKMSTELLLYQNYFTYEL 169 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 R +E L+ L+++E + + ++L + R I+ ++ S + L Sbjct: 170 EGQLRSQELLIEELLKSEPSQSFIQYLTKQLNVAFLTYRKCIIINLEKQIFSRSSIVQRL 229 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 ++ + T VA + +V+L + + R+ Q+ T + L Sbjct: 230 AKIMDKATFA-----VAFTNYNHIVILA---TDELQDELNQKIYRIHQVFTSL----NLD 277 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 R++ FT +Y + ++ ++ + ++D+ LL + + + Sbjct: 278 VRIASSLVFTSLNDFKNAYEECELVFMLNEENVS---FASFEDVEEKTLLYQINEEIRER 334 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 R L L TL + F +++ T+K L+IHRNTL YRL + TGL+ Sbjct: 335 YKKRILGELDNQS-----IETLKSLFENDLNIAQTAKYLYIHRNTLLYRLEKCKLQTGLN 389 Query: 366 LGNFDDRLLLYVAL 379 + D + L +AL Sbjct: 390 PKKYSDAIKLQIAL 403 >UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP28_9BACT Length = 405 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 165/398 (41%), Gaps = 27/398 (6%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 +I T +I N+ + D G I+G+ D R+GELHE +L V+++ R + AR L Sbjct: 1 MEIARSTSDVIGYNVIITDTDGVIVGASDENRVGELHEASLAVIAERRGSSTSEDEARGL 60 Query: 72 HGVRQGINLPLRLEGEIVGVI-GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 G G+ P+ V +TG+ + +R + +V E++L++ A Sbjct: 61 KGTLPGVTYPISSMSGSVVGSMAITGDADKVRPFALIVKKQIEILLKEREFFEHAANREH 120 Query: 131 LREELVMNL---IQAEENTPALTEWAQRLGIDLNQPRVVAIVEV------------DSGQ 175 + ++ + +L + N L A D V V++ D Sbjct: 121 ILQDFIQDLSTFVPGVSNETILLARASEFRYDRTWIYVPVAVDLYQFGRFALSVRRDYVN 180 Query: 176 LGVDSAMAELQQLQNALTTPERN------NLVAIVSLTEMVVLKPALNSFGRWDAEDH-- 227 + +Q ++ + R ++ + S VVL + + Sbjct: 181 REGEKPETVIQGVKRKILLEIRRIFNGPKDISTMESNNRFVVLHGVRPAESYPAPSNAVT 240 Query: 228 --RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 R++ E L+ R+ + G L V +G+ G +A SY+ + + +GK+ M Y Sbjct: 241 VTREKTEDLLGRITDEG-LNAAVGIGSPALGIADLAASYKESWRALTLGKKFMQGPGVYC 299 Query: 286 YQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALF 345 D L ++ ++ + + L L+ + L+ T+ +W + T+K L Sbjct: 300 IDDYRLEEMISTVAPSVRNRFVLSSLRTLREEPDWNELKDTIRSWCESGFSLVNTAKELH 359 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +HRNT+ YRL++I +G DL NF L LY AL LD Sbjct: 360 LHRNTVIYRLDKIKVYSGHDLRNFRTCLNLYTALLLDR 397 >UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicutes RepID=C6PUN4_9CLOT Length = 343 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 102/378 (26%), Positives = 161/378 (42%), Gaps = 40/378 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L AQ IV + M +I NINVMD G IIGSGD +R+G+ HEGA + + ++ Sbjct: 1 MELSKFTAQKIVQKMMEVIPYNINVMDEDGIIIGSGDIKRVGDAHEGARKAIENCAINEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D G++ G+N P+ L+ +++GVIG+TG P+ +R++ +LV +TA +++EQ++ Sbjct: 61 YDDK----EGMKPGVNEPIILKDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQAKANE 116 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + ++ L E E A+ G+D+ + +V+ G L Sbjct: 117 EVQNKRLNMQKFYQELAHRKNEYDEEFYEKAKSYGLDITKKCQTIVVD---GDLNSKEFK 173 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q N + I + E ++ +K+ Sbjct: 174 RICQGYSNYFDLENNKTVFFITNDHEY----------------------NTVLNNLKDSK 211 Query: 243 QLRFRVSLGNYFTGPGSIAR-SYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + ++SLG G IA S A+ M G + P + Y Y++ + L + Sbjct: 212 VVN-KISLG----GQQDIAAVSLENAQMAMEFGMKMKPSYKIYNYEEFKFFIHLSYDNKE 266 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L A L NN L TL A+ N + L IHRNTL YRL RI +L Sbjct: 267 S----LVSLFANLDKSGNNIELIETLQAYIEENGDINNVANKLNIHRNTLNYRLERIHKL 322 Query: 362 TGLDLGNFDDRLLLYVAL 379 TG + F + L L Sbjct: 323 TGKNPKTFLELFELLYGL 340 >UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostridium butyricum RepID=C4IGN6_CLOBU Length = 355 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 187/374 (50%), Gaps = 30/374 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ ++AQ IV + ++ NIN+MD G IIGS ++ RIG +H GA L++ + V+I Sbjct: 1 MLNKQIAQKIVDKISTVLPYNINIMDKEGIIIGSSNKNRIGTIHYGAAEALTEKKEVEIY 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + V+ G+N+P+ + EI GVIG+TG PE++ +G+++ +T+E++L + + Sbjct: 61 NED----EFVKPGLNIPIFFKDEIEGVIGITGNPEDISAFGKIIKVTSELLLSEQYSLKS 116 Query: 125 LAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + L+EE + I E+ Q + ID+ +P+ VA++ + + + Sbjct: 117 ALKKEMLKEEFLYEWIYLKEKYNNEFILKGQSINIDILKPKRVALILHKNIK-----SST 171 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L++++ + E + + + +++LK D ++ + R+E + M++Y Sbjct: 172 ILREVKRYIY--EDDYYIKLSDEKLILILK---------DNKNFKNRIELISDNMEKYS- 219 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++++ + ++ +S+ A T+ + + F+ + L+++ + Sbjct: 220 --VKIAVSS---SNENLNKSFIEAMDTLNIISAVYKSKKILFFDSI---RLINNSIMNLN 271 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +E+ + +L + L TL + N + S+ L IHRNTL YRLN I E+TG Sbjct: 272 YSEIEKMKNKLYEQNGGKELLETLLKFIEFNGEKNKVSEILHIHRNTLNYRLNNIEEITG 331 Query: 364 LDLGNFDDRLLLYV 377 L L ++ D L + Sbjct: 332 LKLNDYMDLYQLIL 345 >UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HVI8_LYSSC Length = 359 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 94/377 (24%), Positives = 168/377 (44%), Gaps = 21/377 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L K+A +IV +TM + NINV+ G I+ SGD+ R+ ++HEGA+ V + + I+ Sbjct: 1 MLTKKLADEIVHQTMLRLRHNINVISPTGVILASGDKMRVEDIHEGAVYVAQTKKTLIIN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + GIN+P+ + E+VGVIG+TG+ E + + LV +T E+M Q+ + Sbjct: 61 EDNIELYPNTKPGINMPILYQDEVVGVIGITGDSEEMLEIANLVQLTTEIMTHQALVESK 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + + L+ + L + Q+L L P V +V + + Sbjct: 121 SEWQRKNNDYIFEALVHGSKLDATLNKRIQKLPFSLIAPFQVILVSLHETSYLENRMPFF 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + L + L L E +L ++++ ++ L + ++ L Sbjct: 181 FEDL-----FYRQPILAGHSQLQEYYILLT------YRQEQNYQSIIKALRKKKQKLPSL 229 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + + +G + SY+ A+T + + F++D+ L L + Sbjct: 230 Q--IGIGPVVQQLSQLPYSYQGARTALEFATIH---NEITFFEDVELFSLFKHRESEEVQ 284 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 R L + TL ++F N+Q ++ L IHR+TL YRLN+I ELTG Sbjct: 285 AFHHRILKNINAKQ-----LETLQSFFDCNLQLKLCAQQLNIHRHTLTYRLNKIRELTGY 339 Query: 365 DLGNFDDRLLLYVALQL 381 D F+D ++L +A L Sbjct: 340 DPQYFEDAVILQMACTL 356 >UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 Tax=Enterobacteriaceae RepID=C4X8E2_KLEPN Length = 385 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 187/380 (49%), Gaps = 15/380 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + T +A +IVAR M II N+NV+D G+II SG+R RIGE HE A V+ G+ + I Sbjct: 1 MIITTALANEIVARAMAIIHHNVNVIDHHGQIIASGERHRIGEQHEVAQEVIRTGKRICI 60 Query: 64 DDA-VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 ++A A H V GIN P+ + +V V+G++G+P + +Y EL +TAE+++ Q+ M Sbjct: 61 NNAAEAARFHNVHPGINHPIIYDDRVVMVVGISGDPAAISRYAELAVLTAELLVRQAIEM 120 Query: 123 HLLAQDSRLREELVMNLIQ--AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 RLR+ L ++ A LG D + PRV +V V Q + Sbjct: 121 RETNWRQRLRDTLFCQYLEQGATPAGQEALHRLLELGFDFDTPRVPIVVTVQVEQHQLSD 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 ++ L + + L+ V ++ E+++L + E + +E +++ Sbjct: 181 ILSTLLREFSQLSGVSD---VILLGSHEILILNALSEA-----QETLLRGIEFVLSNQIS 232 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + + +G I + R A++ + VG + P+ + Y+++++ + L L Sbjct: 233 H----YHIGIGVQADSAPDIREAIRFARSVIEVGSKVQPQRQIYYFREMAMLCLFRVLED 288 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + N + +L D+ +L TL+++ +N +P TS L IHRNTL YRL +I + Sbjct: 289 SYMVNFFINNVRQLLEHDSGEVLLDTLSSFIANNAEPGKTSLLLGIHRNTLTYRLQQIKK 348 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 LD F D L V++ Sbjct: 349 HIQLDPMVFTDLTQLAVSVH 368 >UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKW2_9BACI Length = 384 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 83/374 (22%), Positives = 167/374 (44%), Gaps = 11/374 (2%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + ++A I+ + ++ N+N+MD +G II S D +R+ +HEGA+ V + + I Sbjct: 1 MRITKELAFPIIQKLTNTMNYNMNIMDDQGMIIASSDPKRVDSIHEGAIEVQRSKKPLII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + G ++G+NLP+ EI+G +G+TG+P+ + + ++ +T E+ML+Q+ L Sbjct: 61 ETKESSRFVGAKEGVNLPIEFMNEIIGTVGITGKPDQVMELVQMTKITVELMLQQAYLQQ 120 Query: 124 LLAQDSRLREELVMNLIQAEE-NTPALTEWAQRL-GIDLNQPRVVAIVEVDS-GQLGVDS 180 + + +M LI + + L AQ ID ++ V ++E+ + L Sbjct: 121 QSHFEQQQLHSWIMELINPDTFDEKKLANHAQHFLKIDFDRAYAVILMEISALNALDPLK 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLT---EMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + +L + + + L + E +++ + + K ++ + Sbjct: 181 DLIKRNELWDEINKDIKMYLTESAFMDLTKEGLIIICVEIPPYKSQVQLIEKFFNSIMKK 240 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 K+ R++ G I +SY A+ ++ + K+ M + D + LLD Sbjct: 241 NKKLY-AETRIAAGGRHRLVSGIRKSYFEARQSLSLMKKFMDKKNISHIDDWGIIKLLDQ 299 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + ++ + + L TL F + T+K L IHRNTL YRL Sbjct: 300 VPVSFRKGFIE----QYDIEKLPTELLYTLQTLFNCDHNLTLTAKTLHIHRNTLAYRLES 355 Query: 358 ISELTGLDLGNFDD 371 I ++ L+ + +D Sbjct: 356 IQQIMKLNPKSLND 369 >UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9D3_9FIRM Length = 359 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 89/382 (23%), Positives = 167/382 (43%), Gaps = 24/382 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M LD +A +V +IN +D +G I S + +RIG H + Sbjct: 1 MFKMKLDKSLAFQVVNTIKDTCGQDINFIDKQGMIFASTNADRIGTFHAIGHKAAQTEQT 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 +++ G ++GIN+PL G + VIG+TGEP+ +R+Y L +++ + Sbjct: 61 IEVFSDD--DFPGTQKGINMPLYYHGSFLAVIGITGEPDQVRQYVHLADRITHLLIREKE 118 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQR-LGIDLNQPRVVAIVEVDSGQLGVD 179 L L + ++ LI+ E P + L ++ + + I++ S G + Sbjct: 119 LNRLSRSLEDKKHFVIDALIRNEIADPDYLDTCLSDLQVNPGTKKRLLIIQ--SSPDGHN 176 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 ++ + Q++ +T + VL+ + + + Q++ Sbjct: 177 NSSSLEQKIIGLFSTLGITLYTFYYPNEYLAVLENSG-----------KAALYQILADFT 225 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 +++G ++ SY++A T + R E+ F+ D+ L +LL S+ Sbjct: 226 ADCGALLSIAVGKKC-QLFQLSLSYQSALTALKY--CRSSENGIAFFDDMTLEILLSSIS 282 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + L + ++ L + N L +F N+ L TS+ LF+H+NT++Y+LN I Sbjct: 283 EQEKNAYLQKTISALSDEERN-----LLQTYFEANMSLLGTSQKLFLHKNTVQYKLNHIY 337 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 + GL+ F D +LLY+ALQL Sbjct: 338 QKCGLNPRVFKDAVLLYLALQL 359 >UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicutes RepID=C5VPL2_CLOBO Length = 351 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 93/380 (24%), Positives = 170/380 (44%), Gaps = 34/380 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++A+ IV R M ++ NIN+M+ +G II SGD+ RIG+LHEGA+ + + ++ I Sbjct: 3 KLTKQIAESIVDRMMNVVPYNINIMNNKGVIIASGDKSRIGQLHEGAVDAIKRDKLNLIY 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 G + G+N+P+ ++GVIG++G P + + +V TAE++++Q + + Sbjct: 63 KDNG----GAKPGVNMPIYFNKNLMGVIGISGNPNEVVSFASIVKATAELLIKQDYMFNE 118 Query: 125 LAQDSRLREELVMNL-IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 ++ EE + + + ++ LGIDL+ R+ IV + ++ Sbjct: 119 RRIREQIEEEFLYQWSYLDRKYDEGFIQRSEVLGIDLSVKRLAVIVIGEDKSRIMNIIKN 178 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + + + + L+ + S E+ KRV L ++ Sbjct: 179 YIYSCEYTIRFNAESILIFMKSDKELF------------------KRVLSLYNKL----G 216 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ +G + S R A + + + Y ++ ++ + + Sbjct: 217 GNVKIGVG---LEEEIMTNSVREALRAIEINNKLSLNYDICKYSEVSFIDIISNNIRYEE 273 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L L K +D L +TL + N + ATS+ L IHRN+L YRL +I E+TG Sbjct: 274 NINLIEKLKSFKNLD----LVQTLILYIMLNCEITATSEKLHIHRNSLSYRLKKIYEVTG 329 Query: 364 LDLGNFDDRLLLYVALQLDE 383 D N D L L++A L + Sbjct: 330 KDPKNIMDLLQLFIACILYK 349 >UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostridium RepID=A6M1V5_CLOB8 Length = 342 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 161/373 (43%), Gaps = 39/373 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L +AQ IV M +I NINVMD G IIGSGD +RIG LHEGA + ++ ++ Sbjct: 1 MTLSKTIAQKIVLEMMNVIPYNINVMDESGIIIGSGDSKRIGNLHEGARKAIDNQQINEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + R + G+N P+ + +++GVIG+TG P+ +R++ +LV +TA +++EQS+ Sbjct: 61 FEEDDRM----KPGVNEPIIINDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQSKADE 116 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + ++ L + + A+ GIDL + V +V+ G + S Sbjct: 117 EIQNKRLSMQKFYNELAHRKTKYDENFHQRAKSYGIDLTKKCRVILVD---GNINSRSFK 173 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q+ + R + L+ +K Sbjct: 174 ILYQKYSSYSEVDNRIAFFVT-----------------------SKDLYNGLLENLKTNK 210 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 ++ R+S+G +I S +A+ M G + S Y Y +L + L D Sbjct: 211 DVK-RISIG-AMEDVAAI--SLESAELAMEFGAKIKSSSLVYSYDELRFFI---KLSHDN 263 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L ++ L N L +T+ A+ N + L IHRNTL YRL +I +LT Sbjct: 264 KLP-LISMMSNLDKAGNKLELIQTIQAYIEENGDIGNVANRLNIHRNTLNYRLEKIKKLT 322 Query: 363 GLDLGNFDDRLLL 375 G + N + L Sbjct: 323 GKNPKNLLELFEL 335 >UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK20_BACSK Length = 363 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 102/382 (26%), Positives = 175/382 (45%), Gaps = 33/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++A +IV RTM I+ +N+N+M+A G +I SG+++R+ +H A+ VL G+ + I+ Sbjct: 1 MLTHELANEIVTRTMDIVPSNVNIMNAEGAVIASGEKKRLFNIHSIAVDVLRTGKSISIN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 V G + GINLP+R +G+ VGVIG+TG P + Y ELV M AE+++ Q+ L Sbjct: 61 PTVDCP-SGTKPGINLPIRFQGKSVGVIGITGNPVEVAPYAELVQMAAELLVNQAYLSEQ 119 Query: 125 LAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L Q+ R+ +L+ L+ E EN A E Q G+D + + + L Sbjct: 120 LRQNERIAYQLLRALVVGEVENERAFMERLQATGLD------SLFLPLRAWALSKAHEQT 173 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 ++L + ER L ++ KR E + + Sbjct: 174 FPKELGHFFQYEERGELFF-------------------FETRPEEKRFESFLQK----NN 210 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP--ESRCYFYQDLMLPVLLDSLRGD 301 + G G++A S A+ + + ++ +P E R ++++ ML L + Sbjct: 211 CLLIATSGPVAHSFGTVASSCNIARAALSLYEEDVPTTEKRLLYFEETMLEGLAFEWQQS 270 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L+ L + + L T+ +F HN + F+H NT+ +RLN+I L Sbjct: 271 GTIQPFLALLSPLLASNQSAELMETIKQYFIHNGDIKKIANHQFVHSNTVHHRLNKIKAL 330 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG + + L++A L + Sbjct: 331 TGKNPKVIRELTDLFIACLLYQ 352 >UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35A60 Length = 379 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 89/384 (23%), Positives = 163/384 (42%), Gaps = 15/384 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + +A+ IV I+ N+N+MD GRII S +R+G H GA ++ + ++ + Sbjct: 1 MRITQDVAKTIVNEISNTINKNVNLMDETGRIIASTASDRVGTFHRGAQKIVEE-KLDCL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G R GIN+P+ +G IVGVIG+TGE + + +Y +L+ E++L +S L + Sbjct: 60 TIYTDQEYSGSRMGINMPIYFQGGIVGVIGITGEWDQISQYVQLIRKATEILLMESYLKN 119 Query: 124 LLAQDSRLREELVMNLIQAEEN--TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 D R E V L+ E + ++ +GID R V G G Sbjct: 120 RELHDEASRREYVYKLLFEEFDRIPEQFYQYGFSIGIDAVLARACLTVSFKDGSRGERPK 179 Query: 182 MA----ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 ++ + + E ++ LT++ + P D+E+ ++ E + R Sbjct: 180 QIYEYLDMAEKKVHEYQAEAKQILVYRELTQLSIFIPG------KDSEEVKRTAEDIRKR 233 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + + L I Y A +++V + Y L L + +D Sbjct: 234 ITLPEGIEIKAGLDESLYSGADIRSGYTKACKSLLVA-MASNDRWLVCYNQLTLGLFVDE 292 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + + R A + + L ++R T+ LFIH+NTL+Y+L + Sbjct: 293 VSRATREEYVKRIFAFISD-EEIAKWVSLLEVFYRCEGSITETASELFIHKNTLQYQLKK 351 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 ++ +TG D + L A++ Sbjct: 352 LASITGYDPRSLSCAGLYQTAIKF 375 >UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HJH4_PEPMA Length = 360 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 85/379 (22%), Positives = 169/379 (44%), Gaps = 19/379 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + A+ IV + +ID ++N D G II S + RIG HE A + Q + + + Sbjct: 1 MRISDHTAKMIVEKLKDVIDYDLNFFDQEGYIIYSTNSNRIGTYHEAAKECVKQNKTIFV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ + G ++GIN+P+ ++GEI+ VIG+TG + + KYG ++ E+++++ + Sbjct: 61 DNE--KEYVGAKKGINIPVTIDGEIIAVIGITGNKDEVMKYGNIIKKMTEILVKEQLVEK 118 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + + + L +LI L ++ ++ + V + + + + + Sbjct: 119 NKLKKKDMNKYLFESLIN------ELDDYGLYRYLESEDEKYVIVGKNSESRFLLKDSDQ 172 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L+N L+ NN V V E+V+L ++ D + ++ + Sbjct: 173 IYKILENNLS----NNFVYSVFYGEIVILANNVDKIIIKKKLDKIR------NQIHDAID 222 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R + F ++Y + + Y L L +LL S++ D Sbjct: 223 SRVYFGISGSFKMINQFKKNYDNCMVALDWLDNLQRKDCVVDYSTLDLGILLGSIKKDRI 282 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L + D N + + + + +N ++ LF+H+NT++YRLN++ ++TG Sbjct: 283 KKFKEVVLKDISDEDYN-IYKDLIKIYATNNQSITKCAEDLFVHKNTVQYRLNKLRDITG 341 Query: 364 LDLGNFDDRLLLYVALQLD 382 LD N +D + LY+A L+ Sbjct: 342 LDPRNVEDFIRLYLAFILN 360 >UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGK4_9LACO Length = 392 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 160/374 (42%), Gaps = 41/374 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L TK+AQ IV R M+ I NIN+M+ G II SGD RIG+LH A+ VL + ++ Sbjct: 35 VFHMELSTKLAQVIVDRMMKTIPYNINMMNDEGIIIASGDHTRIGKLHTEAIRVLRKNKI 94 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + + V+ G+N+P+ + +GVIG+TG+P+ + + L+ + E++LEQ Sbjct: 95 LKFSHNDPKE--NVQPGVNIPVNFHDQTIGVIGITGDPQEVTPFALLLKSSTELLLEQQS 152 Query: 121 LMHLLAQDSRLREELVMNLIQAE---ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 + + Q + + T L + A L ID R V I++ + +L Sbjct: 153 FQQIEENKQNKLTRFLFRWTQKDIDFDTTQNLEKEALELNIDFYFERTVVIIKCSAKKLL 212 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 +L+ Q+ N ++ K + + Sbjct: 213 ------DLRLEQDNFHLNRSVNTQVLI-----------------------CKDLSTVKKC 243 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + +RV +G+ G +S+ A+T + + + +Y+++ + Sbjct: 244 INFAHNHNYRVGVGSTTKNIG---KSFYEAQTVIKISTLL--DKDYIYYREVKF--IQQL 296 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L D L + L ++ L TL + +++ T+ L IHRNTL YRL++ Sbjct: 297 LTSDLADKTLVEKFSMLDNTESGTDLLNTLLTYLKNSGNMNKTASDLHIHRNTLLYRLSK 356 Query: 358 ISELTGLDLGNFDD 371 I L GL+ F D Sbjct: 357 IHNLIGLNPHKFTD 370 >UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I7_ABIDE Length = 366 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 89/379 (23%), Positives = 178/379 (46%), Gaps = 24/379 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 + +A +IV + + +IN ++ +G I S D+ R+G+ HE + G+ ++++ Sbjct: 5 ISGILADEIVLAVKDVCNHDINFINPKGIIFASTDKNRVGDYHEIGKQAAATGKTIEVEP 64 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + + G + G+N+P GE++ VIG++G P+ +RK+ L + ++L ++ L + Sbjct: 65 SD--NFSGSKPGVNIPFIFHGEVIAVIGISGIPDEVRKFAYLAQRISGIILRENELERIE 122 Query: 126 AQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 +L+ +I E N L ++ I +V++D+ + ++ E Sbjct: 123 QIQKTQLNQLIRAIIHKEHINQEYLESILKKEKISDCVEYNTIVVKIDTKYNPENISLIE 182 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + + ++ +S E V+L ++ K L TR+ + Sbjct: 183 -NAVYSCFEQTGSRLFISNLS-NEFVILLESIK----------IKNYIGLFTRLANRYEP 230 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +V +GN + RSY+ A+ + M + Y DL L +LL ++ + + Sbjct: 231 IVKVGIGNSYPILKQ-YRSYKNARLAINC---MMGDETLAIYDDLNLEILLGNISEEAGS 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R L+ L D R L +F N+ TS+ L+IH+NTL+Y+L++I+ LTG Sbjct: 287 LFVKRNLSALDEED-----RSLLKIYFGSNMSLKETSEKLYIHKNTLQYKLDKIARLTGC 341 Query: 365 DLGNFDDRLLLYVALQLDE 383 + F + +LY+AL+L++ Sbjct: 342 NPRIFTEANVLYMALKLEQ 360 >UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDC2_9SPIR Length = 387 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 92/379 (24%), Positives = 173/379 (45%), Gaps = 9/379 (2%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+T AQ ++ + M + NIN+M+ G II SGD RIG++H GAL VL +G+ ++ Sbjct: 1 MPLNTITAQKLLKKIMDKLGYNINIMNEYGEIIASGDESRIGKIHSGALEVLKEGKDMEY 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + ++ + G+N+PL + EI+GV+G+TG P+ + K +V +TAE+++E+ Sbjct: 61 FDFIDNNIESAKPGVNIPLFINNEIIGVLGVTGNPKEVGKIAAIVKLTAEILIEKELDTD 120 Query: 124 LLAQDSRLREELVMNLI--QAEENTPALTEWAQRLGIDL-NQPRVVAIVEVDSGQLGVDS 180 + +I E P++ W ++ + N R+V +++ D+ + Sbjct: 121 KKILKQTSINNYINMMISKNNEHYIPSILIWLEKNNYQIENISRIVCLIKFDNNDYLDKN 180 Query: 181 AMAE-LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + + + ++++ E +++K + K L Sbjct: 181 RLNDYIISKIKYPADFNSQDIISYFGDNEFILIKSFDKKQYGSERSILNKFFLNLKNSFD 240 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 L F+ S G I+ SY AK + Q +F +D +L + S+ Sbjct: 241 NKLGLNFKASCGAVSKNINEISSSYEQAKFVLNW-NQYSNSREVFFIEDYILEFYI-SVN 298 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + R + LK + NN + T+ ++N+ TS L +HRNT+ YR+ +I Sbjct: 299 DQSSLKMILRNV--LKIIKNNSNFKETIITMSKYNMSIAKTSSKLSVHRNTIVYRMKKIK 356 Query: 360 ELTGLDLGNFD-DRLLLYV 377 ++ LD N + DR+ ++ Sbjct: 357 DILNLDPINNNIDRIKFHI 375 >UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales RepID=C5EEN5_9FIRM Length = 385 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 91/384 (23%), Positives = 156/384 (40%), Gaps = 17/384 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 +G L + AQ IV ++ NIN+MD RG +I S D RIG LHEGA ++ + + Sbjct: 3 SGLKLSRQGAQSIVEEVGAVVGQNINMMDRRGYVIASTDETRIGSLHEGARKLIGE-HLP 61 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 ++ R G+NLP+ G IVGVIG+TG + YG++V E+++ ++ Sbjct: 62 ELYVETEHATSTSRPGLNLPITHGGSIVGVIGITGLYGEVVGYGQVVKKMVEILIRENAE 121 Query: 122 MHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 R+ + + + L E LGID+ PR V + + Sbjct: 122 QDERRMGQRVLNRFLEDWVIGSGLMQPRILEERGFALGIDIAMPRRVMVASARELEEYAS 181 Query: 180 SAMAE--LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 +A + L+Q++ + + + S ++L + + ++ T Sbjct: 182 TASGQKLLEQVEREAASLAGKGSLVLRSGGRQIILV------KKCPDRQMEQLAGRIRTA 235 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + +R V + I +Y A + + Y + L + + Sbjct: 236 VFKKFNIRMVVGIDGRA---EDIHVAYGQANKAWRSAG--LAKKDILAYDSVTLELFTED 290 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L GD E L + + L A+F A S+ L +H+NTL YRL R Sbjct: 291 L-GDGVKAEYIHKLFKKCGYEELCQWMGLLEAYFEAEGSLKAASEKLHVHKNTLTYRLKR 349 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 + ELTG D+ + Y+A+ Sbjct: 350 LEELTGYDVRLVSQSTVFYMAMLF 373 >UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL12_9FIRM Length = 379 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 160/383 (41%), Gaps = 14/383 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L + A+ IV ++ IN+M+ G II S D ERI H GA V+ + + ++ Sbjct: 1 MELRVQQARAIVHEINTVLPQKINLMNKDGIIIASTDPERIHTFHGGAARVIREN-LDEL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G R G N L++EG +GV+G+TG E++ ++ E+++ + Sbjct: 60 RIYRENEYPGTRPGTNFMLQVEGVPIGVLGITGSYESILPIANVIRKMTELLVHEQEYQR 119 Query: 124 LLAQDSRLREELVMNLIQAEEN--TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + R + L++ E + E A+ L IDL+ PR + + ++DS + + Sbjct: 120 MQTHLQYQRHLFLQELLEHSETFLSKEQIERARLLDIDLSVPRRIVVADLDS-PVSPERH 178 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 QL+ + + +S +M+V + E R E+L K + Sbjct: 179 NEVFSQLE--MEAQRIDAACRAISTNQMIVFLTDIRP-----QEQLRSFAEKLFVYAKSH 231 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 G + + L + + +++ A+ + R Y ++ + + D + Sbjct: 232 G-IGLCLGLDSPAPDNTRLRQAFEQARKAL-YSCHRKGTVHIKGYDEINMELFADLIPLT 289 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + + ++ TL +F H+ + T+ AL+IH+NTL+ L +I+ Sbjct: 290 AKREYVKKIFHGYTPLE-LADAVHTLECFFEHDGSIIRTADALYIHKNTLQQHLRKIAAR 348 Query: 362 TGLDLGNFDDRLLLYVALQLDEE 384 TG D + + YV L ++ Sbjct: 349 TGYDPRSLRSSAVFYVVLYFYQD 371 >UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03T99_LACBA Length = 346 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 43/380 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD K+AQDIV + M I N+N+MD +G II SGD +R+ LH GA+ ++Q + + Sbjct: 1 MKLDPKLAQDIVNKMMTQIPYNVNMMDDQGYIIASGDPQRLNTLHVGAVAAINQQTTLPM 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ H + G+N+P+ +I+GVIG+TG+PE + L+ + E++L+Q++ Sbjct: 61 HDSYGDH---GQPGVNMPIVFNDQIIGVIGITGDPEKVTPLASLLRVATELLLDQNQHNL 117 Query: 124 LLAQDSRLREELVMNLIQAE---ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Q + + Q + L AQ+LGID+ +PR ++ + +G+ Sbjct: 118 QEKQYETTLNRFLYHWSQVTQQIDTNTNLLLEAQQLGIDILKPRAAIVLPKQTLPIGL-- 175 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + + + T ++VL + R+ T + Sbjct: 176 --------------LDATDFQFDLDTTTLIVLTALPATIARF-------------TTYCQ 208 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 GQ R + L + ++ S R A+ T+ + + ++ Q + LLD G Sbjct: 209 TGQHRLGIGLFD-----RNVGNSVRQARQTLRISQIFQRPDFIHYSQIAFIQALLD---G 260 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 +L + +L + N L +TL + R N L T+ AL IHRNTL YRL+R+ + Sbjct: 261 HLHVTDLQQRFQKLASTANGRELIKTLGMFVRLNTNVLQTAAALHIHRNTLSYRLDRLQQ 320 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 + LD D LYV Sbjct: 321 IFQLDPHQTLDLFTLYVGYL 340 >UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N6A9_9FIRM Length = 359 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 88/381 (23%), Positives = 174/381 (45%), Gaps = 37/381 (9%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +++ ++A IV I D +IN +D +G I S D +RIG HE LL + + R++++ Sbjct: 14 MYINNQLATQIVETVKDICDHDINFIDCQGIIYASTDIKRIGSFHEAGLLAIKEKRIIEV 73 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + +G QG+NLP+ +I+ VIG++G+P+ ++KY L +++ + L Sbjct: 74 YDDTS--FNGSLQGVNLPVYYHDQIIAVIGISGKPDKVKKYAYLAQKITNLLIREKELNE 131 Query: 124 LLAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + L+ +L+ E ++ ++ + +DL + I+ + + S + Sbjct: 132 FNRSQAEKMHYLLQSLLDQENLDSQYFSDMLKYFQLDLKNNYRLLII-LAKRLVNEQSII 190 Query: 183 AELQQLQNALTTPE-RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 EL L + + N +AI+ + ++K+ Sbjct: 191 QELHSLAIPVYHYQYPNRFLAIIDADYF----------------------NRCEYKLKKL 228 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + +++G ++ SY +A + + + + + Y L L ++L S+ Sbjct: 229 AGNQVSIAVGKQIPLIK-LSESYHSALIAL----RNIQDHQYINYDVLTLEIILQSISIY 283 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + L + +A L D L +F ++ L T+ LFIH+NTL+Y+L+RI +L Sbjct: 284 DKKDYLNKTIAMLSLED-----LNLLHIYFEEDMSLLNTANRLFIHKNTLQYKLDRIHKL 338 Query: 362 TGLDLGNFDDRLLLYVALQLD 382 G + F D +LY+AL+L Sbjct: 339 CGYNPRKFRDANILYLALKLK 359 >UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2QB04_9BIFI Length = 413 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 95/413 (23%), Positives = 162/413 (39%), Gaps = 43/413 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +D +A DIV + IN + G II S D RIG H+GA L ++ + V + Sbjct: 6 MEIDPNIATDIVTHLKDALRHEINFFNTSGIIIASTDPTRIGSGHDGARLAIASKQTVCV 65 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 DD G R GIN+P++ +GE V VIG+TGE + + +G ++ E+++ + Sbjct: 66 DDE--HRFAGARNGINVPVQFDGEPVAVIGITGERDEVEPFGTVLQKMTEILIREHLDQL 123 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +R+ L+ L N A LGIDL+ P ++A + + Sbjct: 124 ARFNRRTMRDSLITALAYGSGNVADNERLAAMLGIDLDLPCMIASIRGVDPHDLLTYQER 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L + R +++A ++ E +++ D E + + + + Sbjct: 184 IVSALDRQVEG--RPDVLATLTPQECLLVIVG------SDDETAESTIRAAESLISSFTG 235 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR--------------------- 282 +G + RSY A + G R Sbjct: 236 HATHCGVGGRASTMHDCRRSYDQAVAALRWGITAHASPRPASDERDNASPRTRIASTELQ 295 Query: 283 -----------CYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWF 331 Y+DL L +++ + + QA L R + T A+ Sbjct: 296 HCDDENTSLSTFTRYEDLDLGLIVPVIPPE-QAQALTRLVFGGLDDGVIDAYEITFDAYT 354 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 RHN A +K LF+H+NT++ LNRI+ +TG + N +D +L +A L Sbjct: 355 RHNGSISAAAKELFLHKNTMQNHLNRIAAITGYNPRNLNDHTILALAFLLRRH 407 >UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P5T7_9LACO Length = 350 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 45/382 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV M I NIN+M+ G II SGD RI LH GAL + QG+ + + Sbjct: 1 MKLKPELAQSIVDHMMSQIPYNINIMNENGYIITSGDPTRINTLHIGALDAIRQGKTLPM 60 Query: 64 DDAVARHLHGV--RQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 + LHG + G+N+P+ + +I+GV+G+TG+P + L+ E++L QS Sbjct: 61 E-----RLHGQHGQPGVNMPITYDDQIIGVVGITGDPAKVVPLASLLKTAVELLLRQSTA 115 Query: 122 MHLLAQDSRLREELVMNLIQAEE---NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + ++ ++ + +LIQA + T L A++ +DL Q V + Sbjct: 116 AQRKQESAQNQQRFLYHLIQATQTQAPTSELIATAKQFKLDLTQAHTVI---------AI 166 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 D + EL +L N N ++ + + +V++ D R+ ++L + Sbjct: 167 DCQLNELARLNN----DPANLMLMLTNRVGLVIIH---------DPLTCRRLQKRLASAH 213 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 +++G + +G ++ A TT+ + +Q + + Y+ + LL L Sbjct: 214 RQFGVSESGILIG----------KAVTEAATTLRL-RQNLDDETITSYRQIRFYDLL--L 260 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 R + + L T ++ L T+ + R ++ T+K LFIHRNT+ YRLNRI Sbjct: 261 RANLPVQGMVDRFNELATSNSGRELIATIWEFIRSDLNVNQTAKHLFIHRNTVNYRLNRI 320 Query: 359 SELTGLDLGNFDDRLLLYVALQ 380 ++ L N D L++ Sbjct: 321 QKIFKLTPQNATDLFKLFIGYL 342 >UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D2_9BACT Length = 385 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 92/384 (23%), Positives = 161/384 (41%), Gaps = 16/384 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ A IV II ++N+MD RG II S D ER+G H GA +L QG ++ Sbjct: 1 MNISHDSAMRIVTEMSSIIGHDVNMMDERGVIIASTDPERLGAFHGGARELLRQGLG-EL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G RQGINLP+ EG GVIG+TG E +++Y +++ E++L S Sbjct: 60 VVTCDGEYPGARQGINLPVCFEGATAGVIGITGRGEEVQQYSQIIKKMTEILLLDSWGER 119 Query: 124 LLAQDSRLREELVMNLIQA--EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + + + + + + E T E LGIDL +P + +V ++ D Sbjct: 120 QKQLRAAMWSQFMEEWLFSAEELITDRFVERGLELGIDLRKPFQIFVVALEGSAATADEQ 179 Query: 182 --MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + +++ A+ + + + + PA R A + V + Sbjct: 180 ERLGRVEEQIRAVVRASADGFYYKLPFRYVCFVSPASEEKLREMAGRIGENVAR------ 233 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 R + + + + A + + C FY + L +L + Sbjct: 234 --CGFRSFIGIDAEPVDCRHVRGACDRAGKALRAAVRN--GECCAFYDGVDLEILAGEVP 289 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + +A L + G + L+ +F N A +KAL +H+NT++YRL RI Sbjct: 290 LKARQDFIAH-LFHGCSERGRGEIMDFLSVYFHGNGSIQAVAKALCLHKNTVQYRLRRIH 348 Query: 360 ELTGLDLGNFDDRLLLYVALQLDE 383 +LT LD + + + +AL + + Sbjct: 349 KLTRLDPRDLRNAAVFEIALAIHK 372 >UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactobacillus sakei RepID=Q38XR5_LACSS Length = 345 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 167/380 (43%), Gaps = 43/380 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +D +AQ +VAR R I NINVM+ +G II SG+ R+G+ H GA+ + + I Sbjct: 1 MEMDKVLAQKVVARLHREIPYNINVMNQQGTIIASGEPSRVGQSHPGAIEAIQGQKTNII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G +G N+P+ ++ E++GV+G+TG PE L LV +T E++ EQ+ Sbjct: 61 EQD---QPDGTLRGFNMPIVVQNEVIGVVGITGAPEKLTYIAPLVKVTTELLTEQALADQ 117 Query: 124 LLAQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 +L++ R E + + + ++ TP + A LG+++++ +++ Sbjct: 118 VLSRAKRRLERFLFDWLAIQDPAALTPDFVQEANALGVNIDEQYQAMVIKTPHLLP---- 173 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 T E + ++ E+++L ++ E L + Sbjct: 174 ------------ETVEVGSYKLRITPDELLIL---------------TRQAEVLAHWHQN 206 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +++ V + ++ + + A+ + + + Y + LL Sbjct: 207 AKEVQAAVGISQPQKL---VSEALKQAREVIKYNQGTNQKLLYYTAEVNYAYRLL---SA 260 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D +E L D+ +L T +FR+N + T+ L IHRNTL YRL +I + Sbjct: 261 DIVVDEYVEKFRVLAQTDSGQVLITTFQKYFRNNGNIVETAHQLHIHRNTLNYRLGQIKD 320 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 GLD +D+ ++LY A Sbjct: 321 KLGLDPKRYDELVILYTAFL 340 >UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Enterococcus faecium RepID=C2HBS0_ENTFC Length = 366 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 19/382 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ ++A++IV ++ IN +D G II S D ERI LHEGA +VL + V I Sbjct: 1 MNISKQLARNIVKNLKDVLKQEINFIDTEGIIIASTDEERIRTLHEGAKIVLDTKKEVFI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G ++GIN P+ E I+ I + ++KY E++ E++++++ L Sbjct: 61 SED--GQFKGTKRGINAPVYFEQHII-GIIGLTGGKEVKKYAEILKKMTEILIKEAYLKD 117 Query: 124 LLAQDSRLREELVMNLI--QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 Q + +L+ + ++P L E +D + P V + ++ Q Sbjct: 118 FTFQLRERHRLTIESLLFPFSHFDSPHLIE------LDFSSPYYVVVGQLPDNQELYQEQ 171 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + L +L + + L V ++++L R ++++ T + Sbjct: 172 ITPLLELLERVFSYYSQALFT-VHRQQIIILV------NRISRALLISLLDKVQTNFDKS 224 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 QL+ +G+ +S+ A+ + F++DL L +LL ++ Sbjct: 225 YQLQLNFGIGSLCYTEQETPQSFLHAQHACEWITFHQSVNEIRFFEDLDLGILLPAIPSG 284 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 ++ + R L L + + L ++TL + ++N ++ LFIH+NTL+YRLN++ L Sbjct: 285 QRSLYVNRILKSLTEEEVH-LFKKTLTCFSKNNGSIKKCAEELFIHKNTLQYRLNKLHSL 343 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG + N+DD L+L +A L + Sbjct: 344 TGYNPRNYDDYLILKLAFLLIQ 365 >UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJ64_CLOPH Length = 386 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 85/388 (21%), Positives = 162/388 (41%), Gaps = 17/388 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++A +IV +I IN+M+ +G II S D+ RIG HEGA+ ++ + +V ++ Sbjct: 1 MILSVQIASNIVREVNSVIPLKINIMNEKGIIIASSDQPRIGRFHEGAMHII-ENQVDEV 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 +G QGIN PL+L+G I+GV+G+TG+ E + ++ E++LE + + Sbjct: 60 TVHYDGEFNGALQGINYPLKLQGYIIGVLGITGKYEEIASSALIIKRMTELLLENTYSVE 119 Query: 124 LLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD-S 180 + + + E T + LG D+ PR + + G + Sbjct: 120 QRQLKENVYTRYLSEWLNGEAKNITTDFVRRGKVLGFDITIPRRILVCSFYHSNQGENLQ 179 Query: 181 AMAELQQ----LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 +M +++ L+ + + + NL T + + + A + +K+VE+ + Sbjct: 180 SMQVIEEAEKYLKKRVASKDSLNLYYKAGSTLVCAVTSTTDMSVVSLANELKKQVEEKFS 239 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 +R + + + + A+ R + Y DL + V D Sbjct: 240 -------VRLVIGIDSSVENFAFAQTALIRAQKANK-ACMRTQKRDIQLYDDLNMEVFTD 291 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + R + + L ++ S+ LFIH+NTL+ +L Sbjct: 292 EISELSKQEFVHRIFKGFNNEEIRNSMV-LLETFYDMEGSIQKVSEHLFIHKNTLQNKLK 350 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDEE 384 RI+E TG D + L Y+A+ + Sbjct: 351 RIAERTGYDPRSIRHSSLFYIAIYFYRD 378 >UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacillus reuteri RepID=C2EWT0_LACRE Length = 352 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 43/380 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV M I NIN+M+ +G II SG++ RI LH GA+ + Q + + + Sbjct: 1 MELKPELAQSIVDHMMTQIPYNINIMNKKGYIIASGNKSRINTLHVGAVDAIKQRKTLPM 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + H + G+N+PL+ + EI+GV+G+TG+P + L+ E++L+Q + Sbjct: 61 EQQYGNH---GQPGVNMPLKFKNEIIGVVGITGDPNKVTPLASLLKTAVELLLQQKQENE 117 Query: 124 LLAQDSRLREELVMNLIQAEEN-----TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + ++++ + I + L E A RL I+L + R+V + S Sbjct: 118 QEHEIEKVKQRFIYRWINVSKYQNPQLDSELVEEANRLNINLAKQRLVIAIAGSS----- 172 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 Q+ L + + ++ + E+++L K E I + Sbjct: 173 --------QIIKNLKLDQETIIFSLTNHIELIILSS--------------KHQETYIQQK 210 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 E+ ++ + + N+ G +A A TT+ + S ++ Q + +LDS Sbjct: 211 LEHQEIEY--GISNWGNLLGRLA---EQAVTTLRLSNIFGKPSFRHYSQVSFIKQVLDS- 264 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 D + L + L T+ + + N+ T+ LF+HRNTL RL RI Sbjct: 265 --DLNLIAVNDQYEALLKRKDGKELIDTIREFIKCNMSVNQTAHNLFVHRNTLNNRLLRI 322 Query: 359 SELTGLDLGNFDDRLLLYVA 378 +L LD N +D L++ Sbjct: 323 KKLFELDPKNTEDLFQLFIG 342 >UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDQ9_THET1 Length = 388 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 47/398 (11%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 ++A +V + ++D + V D RG +I S DR +G+ ++D + Sbjct: 9 REVANTVVKKIGSLLDQQVIVADDRGWVIASTDRRFMGK---------------NLDTSP 53 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 +R + + +P+++ + ++ + ++ + EM++ Q L+ L Sbjct: 54 SRRM---LHQLRVPIKIRDKCGQLMIIESNKPSVPP--RMAEALVEMVINQIMLVESLPN 108 Query: 128 DSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE-- 184 S L+ +L+ +L+ + + AQ LG+DLN PR V +++ LG D + Sbjct: 109 QSDLKNKLIYDLLHGNSSDETSIIRQAQILGMDLNLPRAVLLIDASKYILGGDDRQLQQK 168 Query: 185 ----LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSF----------------GRWDA 224 ++ + + P + + + E+VVLK + + + Sbjct: 169 VNTIIRSIVDFFMLPS-DTICGYIGEGEVVVLKASSSRDLANWLRPKEKLDTSPSSWANL 227 Query: 225 EDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCY 284 ++ L+++++ + + +G Y G + SY+ A+ + +G + ++ + Sbjct: 228 AALKRAANALLSKLRSETKQPITIGIGRYHPGILGLTASYQDARAALSLGLKFYGPNKVH 287 Query: 285 FYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 L +P + + + N+LA L LK ++ L +TL +F N P + SK L Sbjct: 288 CLDSLGIPAFV-GISDERTKNDLATHL--LKPLEKYPELMQTLEVFFDENCCPTSASKKL 344 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 IHRNTL YRL++I+ LTGLD +FD + L +AL L Sbjct: 345 CIHRNTLTYRLDKIASLTGLDPRDFDSAVQLRLALTLK 382 >UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepID=B5I5X6_9ACTO Length = 421 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 15/350 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ+I + T +I N+ + DA G +IGSGD R+G HE ++ V+ + Sbjct: 1 MLSPSLAQEIASDTTAVIGFNVLITDAGGLVIGSGDSSRVGSFHEASVEVVRTQEPATHN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + A+ L GVR G+ LPL G+ VG +G+TG P +R++G LV E++L +S ++ Sbjct: 61 ASQAQQLRGVRPGVTLPLVANGKAVGTVGITGTPAQVRRFGLLVKRQTEILLRESVMLRS 120 Query: 125 LAQDSRLREELVMNLIQAEENTPA---LTEWAQRLGIDLNQPRVVAIVEVDSGQLGV--- 178 R E+L+ ++ + L A LG DL RV +EV + G Sbjct: 121 RLLAERAAEKLLSDVASYDPQVVEGDFLLFRAAELGFDLRLRRVAVAIEVRVPEAGARRQ 180 Query: 179 -----DSAMAELQQLQNALTT-PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 D A+ + L+ + +++A + + VL+ + D +R Sbjct: 181 GAPTRDMALVRSELLRTVREVFADPQDIIASTAPGWIGVLRRLPDRRPVTSLLDDCRRTT 240 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 +I L R +G + SY+ A + +G + +S + DL + Sbjct: 241 DVIAA---QDGLVARAGIGEPAASVSGLHDSYQDACDALRLGARVASDSPVHLITDLRVH 297 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 L ++ + + R A L+ + +LR T+ AW + S+ Sbjct: 298 QALTTVSQPARNRLIERTTASLRGQPDWPVLRDTITAWCESGFNLVRASE 347 >UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCK1_FUSMR Length = 361 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 89/389 (22%), Positives = 180/389 (46%), Gaps = 36/389 (9%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + ++AQ IV +IID ++N +D+ G II S D RIG H G V+ + ++ I Sbjct: 1 MEISKELAQSIVVEMKKIIDKDLNFIDSNGIIIASTDETRIGTYHAGGKQVILRKDIIKI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G R+GINLPL GE++GVIG++GE + KYG+++ +E++++++ ++ Sbjct: 61 NRD--EEYIGSRKGINLPLNFNGELIGVIGISGETNEVEKYGQIIKRMSEILIKEAWILK 118 Query: 124 LLAQDSRLREELVMNLIQAEE-------NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 ++S + L+ + L E ++ + +++ I +++S + Sbjct: 119 RNEEESEKERIFLETLLFQNSFLYNPIIFSETLEEIEKKKNGVIIVGKIIKIYDLESIKK 178 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 D ++++ N ++++ +++L D K E++I Sbjct: 179 IYDPIRIKVKKY----------NGYSMLNQNTIIIL-------------DFHKDREKIIE 215 Query: 237 RMKEYGQLRF-RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 + E+ + F +G G + SY+ + G + ++ FY DL L +++ Sbjct: 216 LLSEFNKKEFLSFGVGKIKEKIGELKDSYKEGVEALEWGIK--SKNEITFYDDLDLELII 273 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 ++ + + +L T + + ++N +K LFIH NTL+Y+L Sbjct: 274 KNITKNLAQIYKEKIFKKL-TNKEIEEYKIIFLLYEKYNGSLNKIAKELFIHVNTLQYKL 332 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLDEE 384 N++ E T L++ N++D L +A L E Sbjct: 333 NKLYEKTDLNMRNYNDFTKLKIAFMLKVE 361 >UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteria RepID=A6NZ16_9BACE Length = 363 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 82/382 (21%), Positives = 163/382 (42%), Gaps = 32/382 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ--GRVVDI 63 + +++ Q +V + D I V+D+ G ++ + IGE GA+ ++ +V Sbjct: 1 MSSRIFQSVVLQMKESSDRAIGVIDSEGTVVACNELTNIGERWPGAVETVNAAGNEIVTF 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + L G + + + GE + L+C A + L ++ + Sbjct: 61 EGKTFKALTGWGAQFDYAVFVRGE--------------DDHARLICSMAAVALNGAKTYY 106 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 D + V N+I + A+ L PR V ++ + + Sbjct: 107 EEKHD---KATFVKNIISDNILLGDIYVRAKELHFVSEVPRAVFLIR-----QVGSTDVG 158 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + +Q+ + + V +S T++ ++K ++ +++D K +Q+ + E Sbjct: 159 AIDVVQSLFPEKQVD-FVLSISETDVALIKQLSDT---TESKDLYKVAKQIEDALAEELN 214 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ + +G + +AR+Y+ A+ + VGK E Y++L + L+ L Sbjct: 215 VKAVIGIGTIVSHIRDLARAYKEAQVAIDVGKVFDTEKSIINYENLGIGRLIYQLPTTLC 274 Query: 304 ANELARPLAR--LKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L + + +D L T+ +F +N+ T++ LF+HRNTL YRL +I +L Sbjct: 275 EMFLQEVFKKNPIDALDQETLF--TINKFFENNLNVSETARKLFVHRNTLVYRLEKIKKL 332 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TGLDL FDD + VAL + + Sbjct: 333 TGLDLREFDDAITFKVALMVKK 354 >UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCS6_9FIRM Length = 381 Score = 213 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 95/384 (24%), Positives = 166/384 (43%), Gaps = 21/384 (5%) Query: 8 TKMAQDIVARTMRII-DTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 + +AQD V T ++ IN+MD +G II S + RIG H+GA + GR V I A Sbjct: 10 SDLAQDFVEATSSLVRGRTINLMDTKGMIIASTEHGRIGNFHQGAKEAIETGRPVRIAKA 69 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 G ++G N+P+ G+++GV+G+ G+ E ++ L+ + +Q + Sbjct: 70 DLPKYKGAKEGYNMPIFQNGQVIGVVGVYGQEEEVQDVANLLRVYVTQSFKQQVIARRQV 129 Query: 127 QDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + LR +L+ + ++ + + + L L P V +++ + G+ L Sbjct: 130 MEGELRSQLLDLYLLGNPDSQENIEQLSDVLSCHLCFPVTVIVLKT-TAPSGISGIYDIL 188 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +Q RN++ +++ SF DH + + + R G+ Sbjct: 189 RQYFGNDEVFSRNDIYGAKDNIFILI-----RSFTGSKRPDHFEDIAANLCR----GKKE 239 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVV---GKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 R+ + + G I Y+ AK + + G R+ E+R L L LL G Sbjct: 240 LRMVISDSCANAGEIVEGYKEAKALLSLSGDGIDRLSEARAK--SKLYLGKLLQH-GGSH 296 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +L R L + L +F + ++AL IHRNTL YRLNR+ E+ Sbjct: 297 YIQQLNRTLRNEVSAQQEQTLLENAKTYFLMDGSVSQAAQALQIHRNTLLYRLNRLYEIL 356 Query: 363 GL-DLGNFDDRLLLY--VALQLDE 383 GL D+ F+ L + +A + +E Sbjct: 357 GLNDVAPFERELFIRMLIAFRAEE 380 >UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D6A Length = 360 Score = 211 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 37/383 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M +L+T+ AQ I M+II NIN+ D G I+ SGD+ +G LH+GAL L + Sbjct: 1 MYENYLNTENAQKIADGIMKIIPCNINITDTAGEILASGDKSTLGTLHKGALTALKRKEA 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 I + ++GI LP+ I+GVI + G+ E + G++ A + +E Sbjct: 61 YVIYENTPTE----QRGICLPIIYNNSILGVIAIGGDVEEVMPIGQICLSIAVLTIENRL 116 Query: 121 LMHLLAQDSRLREELVMNL--IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 L + + ++ + + E+ A + A LGID+ PR ++ + + Sbjct: 117 LSDMSSIKESRLKDFLYEWISLSREQYDDAFYDQAAYLGIDMKIPRTAVVITSSRIRYSI 176 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 ++ +++ L E + + E+++L + + R+E+++ Sbjct: 177 ------IETIKSHLAAGE---YIVRQGMEEVLIL--------FRSDKRLKSRLEKILDIS 219 Query: 239 KEYGQLRFRVSLGNYFTGPGSI--ARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 K+ N + G I +R+ + T + + R Y ++ L LL+ Sbjct: 220 KDLE---------NCYIGESDIIASRTTNSVMQTFHIARALNIRRRILCYHEVSLECLLN 270 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 ++ EL L LK D +G+L+ T+AA+ N L IHRNTL YRL Sbjct: 271 NVE---VTRELEEILKLLKERDVDGVLKETIAAYVEDNDNYAQICDKLHIHRNTLNYRLA 327 Query: 357 RISELTGLDLGNFDDRLLLYVAL 379 +I EL + D ++LY+A+ Sbjct: 328 KIEELLNRNPRRAKDLMMLYIAV 350 >UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA86_9CLOT Length = 352 Score = 208 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 88/383 (22%), Positives = 149/383 (38%), Gaps = 35/383 (9%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 +L AQ+IV M I+ ++V D G II S +G+ A + Q + Sbjct: 1 MSVYLSVAQAQNIVFELMEIVPKGVSVADENGCIIASSSAAFLGKSSRLAKECIEQAGQL 60 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 H PL VG I +TG+PE +++ + E ++ Q Sbjct: 61 ----QSYNERHYEGNTTATPLFFRDICVGAIIMTGDPERIKRLTSIAKAVGESVICQPYF 116 Query: 122 MH-LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + E L L EE T RLGID+ QP +++ G+ + Sbjct: 117 NNPDQTSYVMYFEYLTEWLNNTEEYTLPFIRRGVRLGIDVTQPYYTVVLD------GIWN 170 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 ++ + ++ L+ P + +VL E ++V L Sbjct: 171 PVSAQKAVERILSGPN----YYLCHNNSCLVLI-----LQEGTDESVLRQVAALF----- 216 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 ++++G+ T + RS+ A+ + GK+ P+ Y Y+D L + Sbjct: 217 ---HDIKIAVGSVETS---LNRSFVVAQNALFAGKRLHPQKNIYDYRDYEFAYALSKI-- 268 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 Q ++ + + L + L +TL + + + LFIHRNTL+YRL++I E Sbjct: 269 --QDLKVKKGVLELFEQPQHADLLQTLEMYIQESGNSAEVIHKLFIHRNTLKYRLDKIQE 326 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 LTG + +F D LYV L Sbjct: 327 LTGKNPRSFQDLFYLYVLYVLYR 349 >UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria RepID=B8HX31_CYAP4 Length = 436 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 51/403 (12%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 K+A+ +V + R++ T + V D G II S +E A L LS RV Sbjct: 34 QKVARQVVEQLTRLLQTGVIVTDQAGWIIAS---------YEPAWLGLSLQRVR------ 78 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 H + I PLR GE G I + + L+ +++L+Q+ ++ Sbjct: 79 -SQFHPLNAAI--PLRW-GEDQGTIRIAASTQTEPLNLRLIQRLVDLILQQTTVLTSGTS 134 Query: 128 DSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVE-----VDSGQLGVDSA 181 L+ + + +L++ + Q G+DL +PR V +++ + + + ++ Sbjct: 135 QHELKHKFIHDLLRGRPLNRLDILRDGQIFGMDLTRPRAVVLIDAANYILATPEFDLERP 194 Query: 182 MAEL-----QQLQNALTTPE--RNNLVAIVSLTEMVVLKPA----------------LNS 218 ++ + + + ++ + + A + E+ VLK + L + Sbjct: 195 THQIWWRAQRVISSVVSFFHLPNDTICAYIGDGEIAVLKASRTQDLAAWASGQDQASLLN 254 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 + ++ L++R++ Q + +G Y +A SY+ A+ + +GK Sbjct: 255 SSWANLSALKRAGNALLSRLRSDTQAAITIGIGRYHPQLEGLAHSYQDARAALSLGKHFH 314 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPL 338 +++ + L + + L + +LAR L L +D L TL +F N P Sbjct: 315 GQNQVHCLDSLGIAAFI-GLADEATKIDLARHL--LSPLDQETELLETLNVFFDQNCCPS 371 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++ L IHRNTL YRL +++ LTGLD FD + + +AL L Sbjct: 372 TTAQQLSIHRNTLSYRLEKVTLLTGLDPRRFDQAMQIRLALLL 414 >UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=Clostridium RepID=A3DGK3_CLOTH Length = 361 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 166/379 (43%), Gaps = 28/379 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG-RVVDID 64 + K+ Q++V + +ID+ +MD G I+ D +++G+ ++ + V ID Sbjct: 1 MSVKIYQNLVNQIKDVIDSEFGIMDDTGLILACSDEKKVGQSSSLVSEIMRSKDQFVVID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + ++ ++ + + + EN +K+ L+ + + ++ Sbjct: 61 GQTFQK-----------VYIKNKLEFITFIDSDSENSQKFLALISINTINV--KNYFDEK 107 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + S ++ ++ N++ + +T A+ L + N RVV +VE + + Sbjct: 108 YDKISFIKGIIMDNILPGD-----ITLRAKELHLQNNVNRVVFLVETEKAKDIYA----- 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ L + + V ++ ++V++K +D ++ K + +I + G + Sbjct: 158 -HEIIEGLFPVKNKDFVVVLDDEKVVLIKELK---PDYDYKEINKISKVIIDTLSTEGMI 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + RV +G I RS++ A+ +++G E Y L + L+ L Sbjct: 214 KARVGIGTVVDNIKDIGRSFKEAQMALLIGGIFDSEKSIVDYNRLGIGRLIYQLPPTLCK 273 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L + T+ +F +N+ TS+ L++HRNTL YRL++I ++TGL Sbjct: 274 LFLKEVFKEGSFEALDSETMYTINKFFENNLNVSETSRQLYVHRNTLVYRLDKIQKITGL 333 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL FDD ++ VA+ + + Sbjct: 334 DLRLFDDAIIFKVAMLVKK 352 >UniRef50_C1B522 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B522_RHOOB Length = 380 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 33/380 (8%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + ++AQ +V +D NIN+MD GRIIGS DR RIG +H GAL + GR V Sbjct: 13 FAYVFTGELAQRVVDEVSPRLDYNINLMDRNGRIIGSVDRTRIGTVHAGALHAIRDGRRV 72 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 +D VR GIN+PL L+G IVG +G+TG+P + ++ +T E++L + Sbjct: 73 LVDAD--EQSADVRAGINIPLTLDGRIVGAVGITGDPAEVESVCSVLALTVELLLRNEQH 130 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG----QLG 177 EL++ L+ L E + +G + P + SG L Sbjct: 131 RDSSRWREAAVRELLLGLVNGTVGENGLLEALRHIGSPMTPPWNITAAVPASGSGSWSLP 190 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 +++A L+++Q A+ L+ V + L Sbjct: 191 SSTSVALLRRIQGEPGVVAAELQGAVWVLSSSVTDRT-------------------LAAT 231 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK-QRMPESRCYFYQDLMLPVLLD 296 + R+ G + + S A+ M++ + +P L+ + + Sbjct: 232 WRRLRTGDVRLVTGRHAASSREL--SVDAARLGMLLTRAALLPTGEVTELSALVPEIAVA 289 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 D + + R L L + LR T A+ HN+ +T+ AL +HRNTL RL+ Sbjct: 290 QQSRDISHDTVERVLTPL-----STTLRETARAFLEHNLSIASTATALQVHRNTLVQRLD 344 Query: 357 RISELTGLDLGNFDDRLLLY 376 RI +TGL+L FD + + Sbjct: 345 RIEHVTGLNLRTFDHAVAMR 364 >UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN6_9FIRM Length = 378 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 162/385 (42%), Gaps = 29/385 (7%) Query: 9 KMAQDIVARTMRIIDTNI-NVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 ++AQ +V +++ I N+MD RG I+ S + RIG HEGA VL R V I Sbjct: 5 ELAQQLVQTASTLLNGRIVNIMDTRGIIVASTEAHRIGTRHEGACQVLRTRRPVAIHREE 64 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 G ++G NLP+ +G+++ V+G+ G P+ +R ++ E Q L Sbjct: 65 LALYPGAKEGYNLPVWNDGQLMAVVGIFGNPDEVRDSAHILAAYTEQFFHQHALDQRARV 124 Query: 128 DSRLREELVMNLIQ--AEENTPALTEWAQRLGIDLNQP------RVVAIVEVDSGQLGVD 179 LR + ++ + + + L A+ L + L P RV ++ Q +D Sbjct: 125 AGELRSSYLRMVLSTLSPDASEQLAILAEALNLHLRFPVQVLALRVPSVTSPCDQQQLLD 184 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 A+ EL + L P + V + +++LK A ++ + ++++ ++ Sbjct: 185 RAIEEL--IFRRLVAPSCD--VWAIMDNRLMLLKSATDTPASP--------LPRMVSALE 232 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV---GKQRMPESRCYFYQDLMLPVLLD 296 + ++ +G T I R+ A + G + ++ C F+ + L Sbjct: 233 QALGRPVQLCVGTPCTSVRQIHRAGAEASLLCDLDRSGVLDIQDASCRFFYLMQRTAL-- 290 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 R +++ L R +L T A++ + L IH+NTL+YRL+ Sbjct: 291 --RESDFIDDMLEKLVRQFGDKELDVLLTTACAYYHCCGSVNQAATQLHIHKNTLQYRLH 348 Query: 357 RISE-LTGLDLGNFDDRLLLYVALQ 380 R+ + L D F+ LL + + Sbjct: 349 RLWDVLCPGDESPFEREYLLRLCIM 373 >UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4Y4_9CLOT Length = 382 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 166/386 (43%), Gaps = 21/386 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 LD I+ R I ++N++ G II S +++R HE A + S R + I Sbjct: 1 MLDYNSCIKIINRLTPIFTKDVNIIGLDGIIIASSNKKRENTYHEAARISASSNRNIIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 G + G+N+P+ +++GV+G+TG E + YG L+ +M++ + + Sbjct: 61 TKNMHMYRGCKCGVNMPITYNNKVIGVVGITGTAEEVIPYGPLIKELVQMIINEIGVETP 120 Query: 125 LAQDSRLREELVMNLIQA--EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + +IQ +E+ + A+ L ID+ R + + ++ + + Sbjct: 121 QKAQKNNEKMYFKEIIQGIQKEDLESYKTRAKLLEIDMKVSRKMVVFKMCNN---YKNNY 177 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +++ L N + ++ + + +++ + D + + LI++MK Sbjct: 178 KKIEDLFNKYLSSLNVLVLNLNNEKIVLLFNNNI---------DIKSYINDLISKMKLSK 228 Query: 243 QLRFRVSLGNYFTGPGSIARSYRT--AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + +G R+Y ++ +G + + L +L+ + Sbjct: 229 TNNYIFIIGKECKEILEYERAYYQIGLVESIEIGNSF---KKVIDVNEYSLKLLIKGISS 285 Query: 301 DWQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 +++ + + N + + +T+ +F ++++ T+K +++HRNT+ YRLN+ Sbjct: 286 EYRNRYIEDYYYEVFEGKNKASNEMLKTIKGYFINDMKIGETAKMMYVHRNTIMYRLNKF 345 Query: 359 SELTGLDLGNFDDRLLLYVALQLDEE 384 ++ G+D+ + +Y+A+ + EE Sbjct: 346 KKMYGIDITKPYECTKIYLAILIYEE 371 >UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmicutes RepID=Q3DF78_STRAG Length = 364 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 172/378 (45%), Gaps = 24/378 (6%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV + +IN ++ +G I S + +R+GE HE L V G+++++ Sbjct: 1 MKLRKQLAQQIVTSIKDVCQQDINFINTKGIIFASTNPKRVGEFHEIGLKVAQTGQMIEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + G + GIN+P E++ IG++G P + KY L ++L++ L + Sbjct: 61 TDQES--YFGTQAGINIPFYYNCELLATIGISGNPNQVGKYALLAQKMTRLILKEHELDY 118 Query: 124 LLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L ++ +L++ E L ++ + + + E++S + + + Sbjct: 119 LDFGRKNEASIVLHHLVEGRELDYYYLNQFLNQYHLSEKTDYRLLTFEINSQKQKLLLSQ 178 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +E+ L N + ++L + + + ++++ + Sbjct: 179 SEM-SLLNFFDKLDTAIYTFNYPNQYWLLLSDQMFDYYYPN----------ILSKFECEK 227 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 L ++V +G + + RSY T+ + K + + DL L +LL S+ + Sbjct: 228 GL-YKVGIGQK-SSLSLLKRSYETSILAL---KALKGQQKVNLVDDLDLELLLTSIDSNI 282 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L + L L D + L ++F+HN+ S+ LFIH+NT++YRLN+I E T Sbjct: 283 KQYVLNKALVNLSEND-----KILLNSYFKHNLSLKECSQELFIHKNTVQYRLNKIYEST 337 Query: 363 GLDLGNFDDRLLLYVALQ 380 L+ NF D LLY+AL+ Sbjct: 338 QLNPRNFKDATLLYLALK 355 >UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RLU1_9CLOT Length = 382 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 83/363 (22%), Positives = 152/363 (41%), Gaps = 16/363 (4%) Query: 8 TKMAQDIVARTMRIID-TNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 + MAQD V T ++ IN+MD G II S ++ERIG H+GA V++ G+ V I+ Sbjct: 5 SSMAQDFVEATSSLVGGRTINIMDREGTIIASTEQERIGTFHQGAAEVIATGKPVLIETK 64 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 G ++G N+P+ L+ E++GV+G+ G E + L+ + Q + Sbjct: 65 DLPRYPGAKEGYNMPIFLKDELIGVVGIFGCEEQMLNVANLLKVYVTQHFAQQAMAQKQN 124 Query: 127 QDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +S +R L+ L+ + + + + + + L P V ++ + + Sbjct: 125 VESEVRNRLLSLLLLGDIGQMETIYQLSALIPVQLAFPVKVIMIRAGKRKNTREQMNHYT 184 Query: 186 QQLQNAL--TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 Q QN + T +R+ V + + +++ A ED K + Q++ Sbjct: 185 QLFQNMMWQGTLDRSRDVFGIQNNDCIIIHSAPRHGK--ADEDLDKIIAQVVREEG---- 238 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVV--GKQRMPESRCYFYQDLMLPVLLDSLRGD 301 +++ I + + T + + G R E Q L+ L+ G Sbjct: 239 --LCIAVSGACPRLEDIPGGMKESNTLISMEGGPVRNLEDSQVKIQYLIYKSLIHG--GT 294 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 A L R L + +L T +++ N S+ L +H+NTL YR+ R+ +L Sbjct: 295 KYAEMLYRKLTASQDARQAEVLLVTARVYYQENGSVQKASERLHLHKNTLLYRMKRLFQL 354 Query: 362 TGL 364 L Sbjct: 355 LDL 357 >UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8N5_RUMGN Length = 372 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 147/381 (38%), Gaps = 13/381 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ +A+ ++ + + N+N+M+ +G II S + ERIG+ HE A ++ G + Sbjct: 1 MLENSLAEKLIEQVTKYTSYNVNIMNEQGVIIASRNPERIGKFHEVAWQIV-HGTTDIMV 59 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 GV GIN+ + +EG+ GV+G+TG P+ +R ++ M E +++ Sbjct: 60 TENDNEYPGVLSGINMIIEIEGKREGVVGVTGNPDEIRPIALIIKMAIETLIKYENQKMQ 119 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + L Q + P + +LN + + + A Sbjct: 120 AFRRQTRKDRFMEMLTQKQYRAPQDIQKLAA---ELNYREDLIRIPILCHLQSASDQEAF 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L ++N ++ + + +++ K D + + + ++ Sbjct: 177 LHSIKNGREHLTQD-ISFQMEDRYILIFKTLKGEHLFSDYKFLLADYLKSTLKWMREEEI 235 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +G + T SY+ K + YFY + + S + Sbjct: 236 CCTFYVGTFQTSFSQYYYSYQHCK--WLETHIFGEHQAFYFYD--FIGEYITSCIPRQEL 291 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 ++ A+ D + + ++N ++ F+H+NT YR N+I E+ L Sbjct: 292 QQIFNVFAQKLPEDFRKNYIEIVGSLIQNNFNIQNAARQCFMHKNTFTYRYNKIREVLRL 351 Query: 365 DLGNFDD----RLLLYVALQL 381 D D + LY+ L+L Sbjct: 352 DHQRSMDDTWMLICLYLYLKL 372 >UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIP6_MOOTA Length = 403 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 147/380 (38%), Gaps = 12/380 (3%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGD-RERIGELHEGALLVLSQGRVVDIDDAVARHL 71 I + + + D RI+ S + LH G L++ R L Sbjct: 21 SIARYLAEVSGRPVVICDLTLRILASQALPSK--TLHFGDYLLVELPRETVEGAFYRGRL 78 Query: 72 HGVRQGINLPLRLEGEI--VGVIGLTGEPENLRKYGELVCMTA-EMMLEQSRLMHLLAQD 128 G + GE+ G + L E+ R Y E + A M+E SR + Sbjct: 79 QKTGTGTPFLMLPIGEVTLYGYLFLLEVGEDWRPYREPLKAAALAAMIEMSRARIAQETE 138 Query: 129 SRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV--DSAMAEL 185 R R E + +++ N A+ + G DL +P ++ ++ +D ++ Sbjct: 139 RRYRNEFIQDILYNNLPNREAMVNRGRLWGWDLTRPHLLVVLSLDRQAQQERDETLWERW 198 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +QL + ++ ++++L P + + ++ L + + R Sbjct: 199 RQLMQYHLKHQAPEIILADRGDQLILLIPVVTDELGVNKGKIAGLIKSLQKSTAAHLEGR 258 Query: 246 -FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 F G ++ + R+Y+ AK + + + F+ +L + L+ + Sbjct: 259 TFSAGAGRFYEDVTDLYRAYQEAKVALEISRLLRRRGTLTFFDELGVLRLIFNQGEQELE 318 Query: 305 NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L ++ D +N L TLAA+ + ++ +FIH NTL YRL +I EL Sbjct: 319 DYYEETLGAIQKYDAKHNTNLMETLAAYLYASGDHNRAAEDMFIHVNTLRYRLKKIEELL 378 Query: 363 GLDLGNFDDRLLLYVALQLD 382 G DL D ++ LY ALQ+ Sbjct: 379 GQDLRRIDVQVNLYTALQVK 398 >UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34F4E Length = 365 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 143/341 (41%), Gaps = 10/341 (2%) Query: 43 RIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR 102 RIG LHEGA ++ + V++D +L G + G+N+P+ +EG +GVIG+TG P+ L+ Sbjct: 30 RIGTLHEGAKKLIEKNE-VEMDIYPDDNLSGAKNGVNVPIHIEGRTIGVIGVTGNPQELQ 88 Query: 103 KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDL 160 ++ A +M ++ A +R R L+ + A+ L + + Sbjct: 89 DIAMVIGEMANIMFMNTQQSMKDASLARRRRLFCEELLLNSRLVINSETLKRAEELSLPI 148 Query: 161 NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG 220 + + + + + + E + + LT+ R L V + + + F Sbjct: 149 QRVQSIGVFHIPEFI-----SETERLAIDDKLTSLLRTFLGDSVYIHHHHIGQNLAVFFH 203 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 + +I + Q+ L P I +Y A+ M + Sbjct: 204 FRAKGSAVAHINAIIRELSMQKQIHIFCGLSCCVKDPSQIHTAYLYAEKAMEIASHAGI- 262 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLAT 340 S+C Y++L L +++ L D L + N LA +F N Sbjct: 263 SQCLIYENLALEIIISQLSPDSIHAFLDNVWKDAEPGQRN-QAADFLAVYFDSNGSLDQI 321 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 ++ L+IH+NT++Y++ +I +LTG D D +L++A +L Sbjct: 322 AQKLYIHKNTVQYKIKKIIDLTGYDPRLPKDAAVLFLAYKL 362 >UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostridiales RepID=A9KIU4_CLOPH Length = 362 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 157/377 (41%), Gaps = 27/377 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++ Q+ + I +I VMD G+ + S + +E A+L Sbjct: 1 MISNQILQNTIEGLKAITRIDICVMDTEGKALASTINN--ADEYENAVLA------FVDS 52 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A ++ L G + + E ++ VI + G+ +++ G++ + +L + Sbjct: 53 PADSQVLQGYQ---FFKVFDEHQLEYVILVKGDSDDVYMVGKIASFQIQNLLVAYK---- 105 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A++L I+ + RVV I+E + + Sbjct: 106 ---ERYDKDNFIKNLLLDNLLLVDIYNRAKKLHIETDVRRVVFIIETKN-----EKDTNA 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+ ++ +T ++ + A+ ++V + N + ED K + ++ + Sbjct: 158 LETVRGLFSTKTKDFITAVDEKNIILVKEVKQNE----NYEDLTKTAKVILDMLNTEAMT 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + V+ G ++RSY+ AK + VGK Y +L + L+ L Sbjct: 214 KVHVAFGTIVNEIKDVSRSYKEAKMALDVGKIFYSGRNVVAYSNLGIGRLIYQLPMPLCK 273 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + D + T+ +F +++ TS+ L+IHRNTL YRL+++ + T L Sbjct: 274 MFIREIFEGKSPDDFDEETLTTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTNL 333 Query: 365 DLGNFDDRLLLYVALQL 381 DL F+D + +AL + Sbjct: 334 DLRVFEDAITFKIALMV 350 >UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C4ZEI3_EUBR3 Length = 361 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 160/377 (42%), Gaps = 28/377 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++ Q+ + I T++ V+D G+I+ + A + + Sbjct: 1 MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPN--------AEAFIEPAQAFVAS 52 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A ++ ++G + + + ++ V+ G+ E++ G++ + +L + Sbjct: 53 PADSQVINGCQ---FFKVFDDHQLEYVLLAYGDSEDVYMIGKIASFQIQNLLVAYK---- 105 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A++L ID+ RVV IVE + + G E Sbjct: 106 ---ERFDKDNFIKNLLLDNLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDG-----NE 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+++++ ++ + A+ +VV + A N +D RK E ++ + Sbjct: 158 LEKIRSLFGGKSKDFVTAVDEKNIIVVKELAENE----TYDDLRKTAEVILNLFRSEADG 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 ++ G ++RSY+ A+ + VGK E Y L + L+ L Sbjct: 214 -VHIAYGTVINELKEVSRSYKEARMALDVGKIFFEERNIIAYSQLGIGRLIYQLPIPLCK 272 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + D + + T+ +F +++ TS+ L+IHRNTL YRL+++ + TGL Sbjct: 273 MFIKEIFDGKSPDDFDEEILSTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTGL 332 Query: 365 DLGNFDDRLLLYVALQL 381 DL F+D + +AL + Sbjct: 333 DLRVFEDAITFKIALMV 349 >UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5ERN2_9FIRM Length = 413 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 81/401 (20%), Positives = 150/401 (37%), Gaps = 31/401 (7%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+T I+ + +I IN+M+ G I+ S E IGE++ A + Q + + Sbjct: 6 MLLNTTTTTSILKKLEPLIPYPINIMNCEGMIVNSSVAEHIGEVNTAACKYMEQTHIPNP 65 Query: 64 ------DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE 117 D V H + + G ++G I L P Y L AE+MLE Sbjct: 66 LQPLGDTDMVTSMCHMI---------VRGHMIGAIELEKLPAADNTYLVLAKTVAELMLE 116 Query: 118 QSRLMHLLAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 Q LM ++ +++ L+ ++ L Q+ G++L+ PR +++ + Sbjct: 117 QEYLMDEQKGNTSSLNDILAILVGVHPLDSSQLIADLQQHGVELSIPRTSLFIQLSKFDI 176 Query: 177 GVDSAMAE------------LQQLQNALTTP---ERNNLVAIVSLTEMVVLKPALNSFGR 221 + ++Q N L + +++ +++ + V+L Sbjct: 177 LEQPLESRKLVLDQKQYQYSVKQFLNQLPSYFYLKQDLVLSDLQEQNAVILSVNRKENPE 236 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 +A + +L K L +G R Y + G+ PE Sbjct: 237 VNALYLFELCTRLTEIAKREYCLALHAVIGIQCNKFSDYERQYEQLILRLSSGRLLFPER 296 Query: 282 RCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATS 341 + ++L + N + RL + +L TL +F + T+ Sbjct: 297 SVFLGNSIVLGNFIAHSSKKVLQNIVTYVYGRLLVSKMSRILLDTLGMFFECELNLTLTA 356 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 + L+ HRNTL+ R ++I +LTG + N D L L +A Sbjct: 357 QKLYTHRNTLQKRFDKIEKLTGFSIHNADGLLTLRLAFLCH 397 >UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FUW6_DESHD Length = 547 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 10/311 (3%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELV--CMTAEMMLEQSRLMHLLAQDSRLREELVM 137 PL ++G IGL E L G L + E ++ + + + + + Sbjct: 229 YPLAGHQGVLGYIGLGIEQGELNPVGRLFLYKAAVLLYFELAKAQSVEDTERQHYRDFLF 288 Query: 138 NLIQAEENTPALTE-WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE 196 +L+ ++ + + + G+DL +P +V + E+ +A Q+L + ++T Sbjct: 289 DLLYNNFDSLEVVQSRGKLWGMDLTKPHLVVVGEIPGYDPDSMDQLA-FQELLDTVSTAL 347 Query: 197 RN--NLVAIVSLTEMVVLKPALN--SFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGN 252 R+ + + ++V+L P +W+A + LI + +GN Sbjct: 348 RSQPRTIFLERNDQIVLLYPLEGMIPLSQWEATAKKLLSPLLILLEGLEEERSMMFGVGN 407 Query: 253 YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLA 312 + I RS++ AK+ + +G+ + R +QDL + LL +L + L Sbjct: 408 LYPSARFIHRSFQEAKSALELGQLFNLQERVILFQDLGVMRLLLNLEQQELEDFRNEVLG 467 Query: 313 RLKTMDNNGLL--RRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 L D L TL A+ + LF+H NTL YRL + +E+ DL + + Sbjct: 468 PLLKFDQENNLHLEETLLAYLASDGDLNLAGDRLFLHPNTLRYRLKKAAEVLDRDLNSLE 527 Query: 371 DRLLLYVALQL 381 R+ L++AL++ Sbjct: 528 TRMNLFIALKI 538 >UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0M4_PELTS Length = 390 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 142/336 (42%), Gaps = 31/336 (9%) Query: 76 QGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREEL 135 +G +PL G ++G I + E ++ ++ EM+L+++ L+ ++S+ +E Sbjct: 51 EGSEIPLEYGGHVIGSIKICREEGQVKGTLDISRSVIEMLLKKAFLVEEQQRESQAKELF 110 Query: 136 VMNLIQ--AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ------Q 187 V L+ + + P L + LG DL P+VV IVE + + D + + + Sbjct: 111 VSQLLNQKSSQPNPTLNILGRILGYDLEDPQVVFIVEFEKKESLNDRSPEWNRLRSIAIK 170 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDA------------------EDHRK 229 + +V +VVLK L +A + Sbjct: 171 IIENFFKFSGGFIVVSYFSGRIVVLKNILYEEAGREAGSCKNGGKEKGEVLLRCRKHLIS 230 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP--ESRCYFYQ 287 E L + + + +G G ++ SY+ A + +GK +S Y Sbjct: 231 LGESLRQAILLGTKHDVSIGIGECHRGVLAVRHSYQEAYLALNMGKYFKEVRQSNIYHIS 290 Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 D L LL + + + + R L +K L+ TL A+F++N+ ++ F+H Sbjct: 291 DFALESLLSRICDEEKERFIERYLGSIKD---EKELQETLEAFFQNNLNIAQAAEKAFLH 347 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 RNT YRL++I LTGL+ +F D L+L +AL + + Sbjct: 348 RNTFTYRLDKIQSLTGLNPRSFYDALVLAIALIMKQ 383 >UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGP6_MOOTA Length = 393 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 90/396 (22%), Positives = 158/396 (39%), Gaps = 40/396 (10%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ ++ Q ++ R + T I+V+D G+++ S + R+ H L + V + Sbjct: 1 MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRV- 59 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVI----GLTGEPENLRKYGELVCMTAEMMLEQSR 120 + LPL + + G + G+ GE L + + A +Q Sbjct: 60 ---------QGESYYLPLVINDRVAGWLVWQGGVKGEVATLLQAALEEILAAARRRDQQY 110 Query: 121 LMHLLAQDSRLREELVMNLIQAEENT--PALTEWAQRLGIDLNQPRVVAIVEVDSGQ--- 175 R E LV +L+ E + L A G DLN PR V +++++ + Sbjct: 111 FTA------REEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPRENRY 164 Query: 176 ------LGVDSAMAEL-----QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDA 224 LG D +L +Q++ L ++ LVA +V+ K L Sbjct: 165 FNINLHLGYDVTEEQLKEEILEQIKGDLYLTAQD-LVAYYGREMLVIFKAFLEVENMGRL 223 Query: 225 EDHRKRV-EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 + + L +K+ RV+ G+ T + +SY+ A + +G S Sbjct: 224 YQALEVICRHLYELIKDNRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGY 283 Query: 284 YFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNG-LLRRTLAAWFRHNVQPLATSK 342 ++D++ L+ SL G + L ++ G L T+ A +N+ T++ Sbjct: 284 IDFEDILFEALVCSLPGRLRGRYLEPLYQKIVAAGEEGIQLLETVEACIDNNMNIKQTAE 343 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGN-FDDRLLLYV 377 L++HRNT+ RL RI LTGLD G F L + Sbjct: 344 QLYLHRNTVTNRLERIKLLTGLDPGTGFRALFWLKM 379 >UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria RepID=C4Z3X9_EUBE2 Length = 363 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 124/297 (41%), Gaps = 16/297 (5%) Query: 85 EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE 144 EG + +I G +++ G+L + +L + + ++ + NL+ Sbjct: 70 EGNLEYIIMARGTSDDVYMVGKLAAFQIQNLLVAYK-------ERFDKDNFIKNLLLDNL 122 Query: 145 NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIV 204 + A++L I+ + RVV I+E + + L+ ++ R+ + A V Sbjct: 123 LRVDMYTRAEKLHIETDVKRVVYIIETKH-----EKDTSALETVRTLFANKTRDFITA-V 176 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSY 264 ++++K G ++ K + +I + V+ G ++RSY Sbjct: 177 DEKSIILVKEVK---GNESYDELDKTADVIIDMLNTEAMSAAHVAYGTIVNDIREVSRSY 233 Query: 265 RTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLR 324 + AK + VGK Y L + L+ L + D + Sbjct: 234 KEAKMALDVGKIFYSNKNVVAYNRLGIGRLIYQLPIPLCQMFIKEIFEGKAPDDFDDETL 293 Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T+ +F +++ TS+ L+IHRNTL YRL++I ++TGLDL FDD + +AL + Sbjct: 294 STINKFFENSLNVSETSRQLYIHRNTLVYRLDKIQKITGLDLRVFDDAITFKIALMV 350 >UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoanaerobacter RepID=B0K668_THEPX Length = 350 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 173/383 (45%), Gaps = 39/383 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G+ L K+A DI + + + ++D G +I G+++ E G L + +V Sbjct: 1 MIGYDLIKKVAYDI----QKNLQMPLYIIDKSGNLI-YGNKDFF-EKKAGFLEI----KV 50 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ID+ + ++ V + I + + I L + E +K L+ + E +L Sbjct: 51 EYIDE---KDIYEVGEFICYNIFYNNVLFFTIALERKDEQSKKVLYLISLIFEQLL---- 103 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 REE ++ + + + ++ +A++ I+ N VAIVE ++ +D Sbjct: 104 -------QKYNREEFLIEALTGKLSVNLVSYYAEKYKINKNVKYTVAIVESNNE---IDD 153 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 A+ + + + + N V + F + + + ++ Sbjct: 154 AIKIITNIFD-----KGNLYTVKFDDKRFVTI------FSYKGNNSLIELYKTMKDMIES 202 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 G ++ +++ + F +I +YR A+T +++G++ E Y Y+D P +L + Sbjct: 203 EGYMKVKIASSSSFVPIENIHIAYREAETALLIGQKLEDEKGIYIYEDYSFPEILWGIDI 262 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + N + + + + L +TL A+FR+++ T++ L+IHRNTL YRL++I + Sbjct: 263 EKVNNFIKKRNIDF-GIFKDEELIQTLNAFFRNSLNLSETARELYIHRNTLVYRLDKIFK 321 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 +TGLD NFDD +LL + L + Sbjct: 322 MTGLDAKNFDDAVLLKTIMILTK 344 >UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKQ6_SANKS Length = 360 Score = 174 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 89/385 (23%), Positives = 146/385 (37%), Gaps = 46/385 (11%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +++AQ +V ++ ++NVMD G II S D ER+G LH GA V+++G V + Sbjct: 8 PLSSELAQRVVDTVTSRLERHVNVMDEHGVIIASSDPERVGTLHHGAARVVAEGHTVTVT 67 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 R G+N PL ++G + GV+G+TG+P + + +V + ++++ Q R Sbjct: 68 TPEPGSSD--RPGVNEPLVIDGRLCGVVGVTGDPREVAQLATVVALGVQLLITQERSYDA 125 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + S EL+ L + + + G+ P + + G S Sbjct: 126 ATRRSTAARELIAFLTSGPPDATEVGSRLRSAGLGTG-PWNLGVWAHPEAPRGGSS---- 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 V L +LNS E+HR V + + + Sbjct: 181 -------------------VPPDGAAHLAASLNSR-----ENHRAAVMHGLLWILDRSPR 216 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVV-GKQRMPE-----SRCYFYQDLMLPVLLDSL 298 + V+ G +A + + + R P + D +L Sbjct: 217 QAVVA-GARGLSVTQVAAPDQLLAHALDLRALSRYPRLLPVGGQVV--DDGAALLLGLGH 273 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 A +ARL D +L T + S ALF+HRNTL +R+ RI Sbjct: 274 LPPASLARRAATVARLSASDAETVLALTRST------TLAEASAALFVHRNTLLHRVQRI 327 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 +LT LD D L+ L E Sbjct: 328 RDLTSLDPRVPGDLAALHTGLLARE 352 >UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostridia RepID=B9MKN7_ANATD Length = 364 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 150/371 (40%), Gaps = 25/371 (6%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 D++ + IID ++A GR+I S + ++ A+ ++ ++I + Sbjct: 8 DVLEQAKDIIDDEFGYIEADGRVIYSSNPLSQNRINTVAIDMIKTDTDLEIFE------- 60 Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLR 132 G + V+ + N + E + +++ +++ + + Sbjct: 61 ----GRTYKVYRSQTDTYVLYI----NNTEPHAEKLLDMLNLVVMKAK----EPASAYDK 108 Query: 133 EELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNAL 192 + + NL+ + A+ L I RVV + + + + D + E+ L + Sbjct: 109 KLFIKNLLYDNILPGEIYTKARELHIATGATRVVFAIYIPNAKEIKDLNIGEI--LTSIF 166 Query: 193 TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGN 252 ++ ++ + + +L + ED K ++ + L+ + +G+ Sbjct: 167 PKSTKDFIIQLDNN----ILVFIKELKPGSNDEDAYKVARIILDTLNSELLLKAYIGIGS 222 Query: 253 YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLA 312 ++ SY+ A+ + +G + Y L L L+ + L Sbjct: 223 VVDDIKELSMSYKEAEAALKIGYIFEKDKYIVSYHKLGLGRLIYQMPTKLCEMFLEEVFK 282 Query: 313 RLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 +K D + L +T+ +F N+ T++ L+IHRNTL YRL++I + GLDL F+D Sbjct: 283 DVKLSDFDPELIQTVEMFFECNLNVSETARQLYIHRNTLVYRLDKIERMIGLDLRKFEDA 342 Query: 373 LLLYVALQLDE 383 ++ +A+ +++ Sbjct: 343 IIFKMAMLVNQ 353 >UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Enterococcus faecalis RepID=C0X821_ENTFA Length = 337 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 85/385 (22%), Positives = 158/385 (41%), Gaps = 58/385 (15%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD A IV + M I NIN+MD RG+II SGD RIGE H GA +++ + ++I Sbjct: 2 LKLDKIQANKIVEKLMADIPYNINIMDERGKIIASGDSARIGERHRGAERAINERKNIEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + ++G N P+ L I+GV+G++GEP+ +RK+ +LV ++ E+ Sbjct: 62 YKDTSLE----KKGTNEPIILNDHILGVVGISGEPDEVRKFTKLVRSIVLLLTEELNTQQ 117 Query: 124 LLAQDSRLREELVMNLIQAEE-NTPALT-EWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + + + + + +L+ + + AL E + + L+ D Sbjct: 118 EREKKKKQKNQFIQHLMHVDSAYSEALKLEALELYNLQLD-----------------DQN 160 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 L + + L++ + + +V+ + K V + + Sbjct: 161 HCVLTKDKRLLSSYYPGHEIFEWENCYLVI---------TSEPPQITKPVTEYL------ 205 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTT-MVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + + + A+ T +++ ++ +++ Y +D + + + Sbjct: 206 -------VISSEKATIQQM---VQEAQNTYLLLSFLQLEKAKFYQAEDFFIQGIFNFPFH 255 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + + T+ + HN+ TS+ L IHRNTL YRL RI E Sbjct: 256 --IELDFFETIQTIYD-----EYYETVIFFANHNLNINETSQVLHIHRNTLNYRLKRIHE 308 Query: 361 LTGLDLGNFDDRLLL--YVALQLDE 383 LTG+D + D L Y A E Sbjct: 309 LTGMDPKVWQDFWKLFYYFAYCFKE 333 >UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8G125_DESHD Length = 555 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 70/390 (17%), Positives = 148/390 (37%), Gaps = 23/390 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 I ++ + V D + + S + + I E L + + Sbjct: 157 ICQTLEELVGNPVVVYDKNFKCLQSTNPQ-IERFEEPEEFALRENLNDKFSYYRQSVCYP 215 Query: 74 VR-----QGINLPLRLEGEIVGVIGLT--GEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 + +P++ ++ G + + +P + + L+ + + Sbjct: 216 DLDGRCIPQVVVPIQAFNQLKGYLTIVELNKPIVEMDFISIEQAATVTTLDMVKRFAVKE 275 Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDS-----------GQ 175 + + + +L+ +++ E ++ E + DLN+P V + ++ + + Sbjct: 276 VEYKFKNDLIEHILSGELSSTNAQERINLMEWDLNRPYYVVLFDLKNLDAYHVEHRTQQK 335 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 + + S +E+ + + + + + +V+L P + E +K +Q Sbjct: 336 MALQSIKSEITSTISGVIKTRTRDFIIGNKVDIIVLLWPVAANPQENSLEKIKKIAKQAQ 395 Query: 236 TRMKEYGQ-LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 ++K+ + L V +G+ G I RSY+ A + G ES + +L + + Sbjct: 396 EQVKKRMKKLIVEVGIGDLAHGAEEIPRSYKEALDALSYGGMISNESAIVAFSELGVFRI 455 Query: 295 LDSLRGDWQANELA-RPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L E + L R+ DN L +TL + N +K LFIH T+ Sbjct: 456 LCKFAERNSLEEFIPKALLRILRYDKDNEAELLKTLEVFLECNGNASRAAKELFIHYKTI 515 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQL 381 YRL RI E+ LDL + +RL L + L++ Sbjct: 516 LYRLERIKEVGQLDLEDSKNRLELEMGLKM 545 >UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZL0_9CLOT Length = 534 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 71/399 (17%), Positives = 166/399 (41%), Gaps = 37/399 (9%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 ++ + Q I+ +++ +I D + ++ ++++ Sbjct: 151 INNEDTQSIINALSDLLNEDILYYDTY----------FQKAYYSCSMEMVTEEFRDFNLS 200 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGL---TGEPENLRKYGELVCMTAEMMLEQSRLM 122 + H GIN E+ G I GE Y L ++L+ + + Sbjct: 201 DILNKYHYYTIGIN------KEVYGYIIYLKHKGEDIEKDNYNALSHANTALILDVQKKI 254 Query: 123 HLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 L + + + E V ++I + + + A+ G DL++P V ++++D+ ++ Sbjct: 255 SSLQIEDKHKNEFVQDIIMNNIKFKEEVNKRAEIFGWDLSRPIRVMVIDIDNFKVEYLKL 314 Query: 182 MAE-------------LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 ++ ++ + + + R+ + A S + + +L+P R+D+ + Sbjct: 315 ESKNSNEELEFIREKIIKNITQIIKSYFRDAIYATFSDSLVFLLQPKDKDMKRFDS-QIK 373 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 K +++ +E + + +G++ I +SY A ++ +G+ FY + Sbjct: 374 KSSDEIRNSTREKFEFTVTLGVGDFKDDIMEIHKSYEEALMSIKIGRVLYKNDAAIFYGE 433 Query: 289 LMLPVLLDSLRGDWQANELARP-LARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALF 345 L + LL S+ + + E + + ++ D N L +TL ++ + + ++F Sbjct: 434 LGVFRLLYSVYENEEVMEFCKSSIGKIIDHDEKYNSELLKTLIIILENDWNLKSAADSMF 493 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 IH NT++YR +IS L DL ++ RL L +AL++ + Sbjct: 494 IHYNTMKYRYKKISMLLDEDLNQYEVRLKLSLALKIYQM 532 >UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGM2_MOOTA Length = 553 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 79/393 (20%), Positives = 153/393 (38%), Gaps = 20/393 (5%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELH--EGALLVLSQGRVVDI----DD 65 +I ++ +++ D R I S R G + A LV ++ + + Sbjct: 159 EIARTLAGLLGLPVSIHDPAFRKIASWLAPRDFGADNNRALAELVNDSKQLAEACKCGRE 218 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTG--EPENLRKYGELVCMTAEMMLEQSRLMH 123 + + G I P+ + EI + + G +P + R+ + + LE S+ Sbjct: 219 QLVFNCAGGLYAICRPVTVAEEIYAYLFIWGPQKPISEREITGIEQAVTVIALEISKQRA 278 Query: 124 LLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS-- 180 + +SR + + L+ + + A+R G ++ V + E D Q D Sbjct: 279 VFDVESRFKSSFIEYLVDGKITSKEDAIILAERFGWEIANGFTVMLFECDDLQSLYDQEP 338 Query: 181 ------AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 + ++ + A+ + + V MV+ +P + + Sbjct: 339 VFARKKRLKIMEIVNTAVVSLSPGSAVVERGRRLMVLHRPLPGKDIKQLRRNSETLARSC 398 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 + + R V + + P IA + + +G++ + + + DL + + Sbjct: 399 CEELAKRLDTRILVGISRFIADPMKIAEGINQSHQALEIGRRAYERGQVFHFDDLGVYRI 458 Query: 295 LDSLRGDWQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 L + L +L + D L TL F +++ T+ ALFIH NTL Sbjct: 459 LLTSDAAEMQRFYDDILGQLVSYDEENKAGLITTLEMLFANDMNLQKTADALFIHYNTLR 518 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 YR+NRI ++TGLDL + DDRL L +AL++ + Sbjct: 519 YRINRIQQITGLDLKSPDDRLSLQLALKILHMK 551 >UniRef50_C9S1P6 Putative transcriptional regulator, PucR family n=2 Tax=Geobacillus RepID=C9S1P6_GEOSY Length = 739 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 19/319 (5%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL--AQDSRLREELVMN 138 P+ G+ VG + + P + + L A + + L +L++ + Sbjct: 412 PIHNGGDAVGYLAIETSPNEMDDFFLLGVELARNIFSIQFMKQKLVFETKEQLKDSFLHK 471 Query: 139 LIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEV----DSGQLGVDSAMAELQQLQNALT 193 L+ AE E+ ++ ++A ++ + +A++ + +G + + AE L N L Sbjct: 472 LLAAEIEDEESIIQYANVFQWNIFEEHRLAVLHLQMDESNGTVDLVKQNAEKTVLWNRLK 531 Query: 194 ---TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV-- 248 E ++L+ + +++ PA R E + Q I+R + +RV Sbjct: 532 VRIAAEDSSLLYGAVEDQYILIAPAARE--RKKPEKYWSEWHQRISRWINEEKTSYRVFL 589 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG----DWQA 304 +G + G SYR A M V + P F+ +L +L L+ Sbjct: 590 GIGGKASSIGDYYVSYRQAMQAMQVMIRNFPGKSVAFFDELGAYTVLHHLKELEAAKLFV 649 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 ++ PL R ++ N +T+ + N T++ L+IHR+TL+YRL +I E+ G Sbjct: 650 DKYLGPLLR-HSVGRNADWLQTVRVFLDCNGHLTETAERLYIHRSTLQYRLEKIEEMLGF 708 Query: 365 DLGNFDDRLLLYVALQLDE 383 L + R L +AL+L + Sbjct: 709 SLQGAEQRFNLMMALKLYD 727 >UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FPT8_9CLOT Length = 377 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 148/379 (39%), Gaps = 31/379 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINV--MDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++ + I+ + +V M+ + I + +RI G L +G+ + Sbjct: 18 LSNQILHKPINDIHEIMGVDCSVWSMEGKCLAIAGMNEDRI---KAGVDKFLKEGKDEQV 74 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + A L +R + V V+ L E + G L + Q + + Sbjct: 75 CEDEAFFL----------IRDNYDAVYVLALHEVVEQVAIIGRLC-------ISQFQNLI 117 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 ++ + NL+ + A++LGI++ + RVV ++E + + Sbjct: 118 HAYKERLDKNHFFQNLLLDNLLLVDIFNQAKKLGIEVERRRVVFLIEPKNETDNI----- 172 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + + L + V V ++++K + G + K + + + Sbjct: 173 -VLETMKGLYATGSKDFVTSVDEGHIILIKALETTEGYKELNMIAKSI---VDTLTMEAM 228 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + RV+ G +++SY+ A + VG+ + Y +L + L+ L Sbjct: 229 VNMRVAYGTIVNQLRDVSKSYKEAGMALDVGRIFYEQKNVLAYNELGIGRLIHQLPVSLC 288 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L + T+ +F++N+ T++ L++HRNTL YRL +I +LTG Sbjct: 289 DMFLQEVFDGKAVDQFDEETLSTVNQFFQNNLNISETARQLYVHRNTLVYRLEKIQKLTG 348 Query: 364 LDLGNFDDRLLLYVALQLD 382 LD+ FDD L +A+ + Sbjct: 349 LDVRVFDDALTFKIAMMVS 367 >UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FWS7_DESHD Length = 407 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 7/308 (2%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM--LEQSRLMHLLAQDSRLREELVMNL 139 L + + +G + + + +++ A + LE + LL ++ + +L Sbjct: 91 LSHDAKRLGFLFICDPGADEDNRLKVLIHQARNVFVLELQKKAELLENSRNYQDAFLFDL 150 Query: 140 IQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA--MAELQQLQNALTTPE 196 + E+ + + G DL+ P VV E++ + + L + ++ Sbjct: 151 LYGNIEDNADIIARGKLWGWDLSLPHVVTAFELEDYESYSQDHYLVTTLHDIIQSVAQSL 210 Query: 197 RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF-RVSLGNYFT 255 ++ + E+V+ P R + Q++ + +E R RV +G + Sbjct: 211 DKTVILMEKNEEVVLALPVEARKRRDFKAYLNMIINQVLAQAEERLAPRVIRVGVGRRYE 270 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK 315 P + RSY+ AK + + + ++++L + +L S LA L+ Sbjct: 271 QPSELFRSYQEAKVAVKLSALLKDKGPIVYFRELGVERILYSHDKQELLEFYREILAELE 330 Query: 316 TMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL 374 D L TL + ++ AT+ ALF+H N+L YRL RI E+ LDL +FD R+ Sbjct: 331 AQDKQKNELIETLENYLVYHCDLKATADALFLHPNSLRYRLKRIEEILDLDLEDFDTRVS 390 Query: 375 LYVALQLD 382 L +A ++ Sbjct: 391 LVIAFKIK 398 >UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=Chloroflexaceae RepID=A5UPM6_ROSS1 Length = 525 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 19/305 (6%) Query: 86 GEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE- 144 G G + L G+ + + + LE ++ +LA + RLR + V ++ Sbjct: 223 GRNFGYLALCGDTLDDWDRLAAQQGASALALELAKEQAVLAAEERLRGDFVQAVLVGAAT 282 Query: 145 NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVA-- 202 + L + + LG DL QP V + + VD + ++ +AL+ VA Sbjct: 283 DDKTLVQRGRELGYDLRQPHVALLCGI------VDGDDRTIARIADALSAALNALGVAAP 336 Query: 203 -IVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIA 261 + + +++ PA++ R+ V L+ + V++G + + Sbjct: 337 MMRRIDDVLCYIPAVSRGRRFH------EVADLLRQRLVNDIPNVLVAIGREAPTLTAWS 390 Query: 262 RSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMD-- 318 RS R A+ +++G++ + R + DL + LL LR + E R LA L D Sbjct: 391 RSLREAEQALLIGRELVGNGRVLDFSDLGVYRLLLLLRESPELWEFYRSTLATLVEYDRD 450 Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 +G L +TL A+F HN T+ AL IHRNTL YRL RI E++G D +DRL L++A Sbjct: 451 QHGELLKTLEAFFEHNGNLARTADALHIHRNTLLYRLTRIKEISGRDPDVAEDRLALWLA 510 Query: 379 LQLDE 383 L+ Sbjct: 511 LKAHR 515 >UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=C9Z018_STRSW Length = 592 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 22/305 (7%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRLMHLLAQDSRLREELVMNL 139 LR GE++GV+ L ++ +Y A + LE S L HL + RL ELV +L Sbjct: 296 LRPRGEVLGVLALVDPLDDADEYTLFALEHAAISLALEMSHLRHLAEVELRLHRELVDDL 355 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN 199 + + T A ++ G DL++ + V +V+ S Q+ D+ + ++ +A+ P Sbjct: 356 LGGTDETSA-YARSEAFGHDLHRIQYVVVVQWKS-QVSDDAFARTVGRVASAVGMPS--- 410 Query: 200 LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGS 259 + ++ VVL E + E G + + P Sbjct: 411 --LVTRRSDHVVLVAEGRPHEHALYEALAR----------ETGTNDGTIGVSARCDTPDG 458 Query: 260 IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMD 318 I Y+ A + V ++ F+ +L L +L + + L +L D Sbjct: 459 IPGRYQEALRALEVRRRSRKRYGTTFFDNLGLYRILGPGNEYRELEAFVQEWLGQLTDYD 518 Query: 319 --NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLY 376 + L TL+ +F T+ +L IHR+TL YRL RI E++G DL N +DRL L Sbjct: 519 GRHRTALVETLSRYFDCGGNYAETADSLTIHRSTLRYRLQRIREISGHDLTNVEDRLNLQ 578 Query: 377 VALQL 381 VA ++ Sbjct: 579 VATRV 583 >UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZD57_EUBR3 Length = 365 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 118/305 (38%), Gaps = 14/305 (4%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVM 137 I + ++ E+ V+ + Y + M + Q R + L + R + Sbjct: 63 IAFAVEIDSELEYVLVMFC------PYTSENLVIGRMAVCQLRTLVLGESERYDRNNFIQ 116 Query: 138 NLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 N++ + A++L I+ N+ RVV +++ + +L L Sbjct: 117 NILLGNMLGSDIINRAKKLHIE-NRKRVVYVIDTGKNSNEIAV------ELAKNLADIRS 169 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGP 257 + V + +V++K + E L+ + ++ RV GN Sbjct: 170 GDFVVAMDEHNVVLVKDVEDIDSPKLQEKLSSIAGSLVDNLLAEAMIKVRVGYGNPTDVL 229 Query: 258 GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTM 317 I SY+ AK + VG+ E Y L + L+ L + Sbjct: 230 PKITESYQEAKMALEVGRLFYVEKEIMAYDRLGIGRLIYQLPMSLCEMFIREVFGDEVPQ 289 Query: 318 -DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLY 376 ++ T++ +F +N+ T++ L++HRNTL YRL RI + GLD+ FDD ++ Sbjct: 290 ILDDEEAMSTISKFFENNLNISETARQLYVHRNTLVYRLERIEKSIGLDIRTFDDAMIFK 349 Query: 377 VALQL 381 +A + Sbjct: 350 IATMV 354 >UniRef50_A8UB66 Putative uncharacterized protein (Fragment) n=1 Tax=Carnobacterium sp. AT7 RepID=A8UB66_9LACT Length = 313 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 149/365 (40%), Gaps = 54/365 (14%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L A+ IV++ M I NIN+M+ G II SGD RIG H A + + +++++ Sbjct: 1 MLTNSQARLIVSKLMEDIPYNINIMNNLGIIIASGDNNRIGTSHRAAERAIKEKKIIEVY 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 H ++G N P+ E I+GV+G+TG+P +R + ++V A +++E+ + Sbjct: 61 QDT----HLEKKGTNEPIIYEDIIIGVVGITGDPNEVRPFTKIVKTVALLLIEELNIYKQ 116 Query: 125 LAQDSRLREELVMNL-IQAEENTPALTEWA-QRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 ++ + + + + + T L + A ++ ++L QP E + S Sbjct: 117 KEENRVAKNDFLKQIRLSDGMYTELLKKEASEKYELELGQPYYGVFAERKEILRAIASKK 176 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + + ++ E + + + E +++ + K + Q++ Sbjct: 177 ELFEWSEGSIIFMETVDSLE-TATNEFIIISSS------------EKNINQILQ------ 217 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 I ++Y A + + K+ Y L L Sbjct: 218 ----------------DIKQTY--ALLSFLNTKKEGINKTESCY----LANLFSFSLPPN 255 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 Q + L ++K + TL ++ R+N TS L IHRNTL YR+ +I ELT Sbjct: 256 Q-----KLLKKIKEV--APEYAETLISFARNNKSINDTSLELHIHRNTLNYRIQKIEELT 308 Query: 363 GLDLG 367 G + Sbjct: 309 GKNPR 313 >UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TND5_9BACT Length = 538 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 23/322 (7%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMT---AEMMLEQSRLMHLLAQDSRLREELVMN 138 + L G++ G + + E+L + + +T ++L R + + +SR R E V + Sbjct: 210 ISLNGKVYGYLLFDCKQEDLAERNCEIPITQAKGAILLYMQRRVAEIQAESRYRNEFVQD 269 Query: 139 -LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 LI + A+ G DL V ++++D+ + + E L +T +R Sbjct: 270 ILIHNLRFEGEVWNRAKMFGWDLQGSHCVVVMDIDNYKHQFEKRSRERDFLPMLESTKKR 329 Query: 198 ---------NNLVAIVSLTE----MVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + L V TE + + P F + A+ + T +KE Sbjct: 330 IYRICKNHVHGLFESVPYTEMSDSISFILPTEEGFPAFKAKT-TPLFRDIQTSIKEDTHF 388 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL----RG 300 + +G+ SY A+ + + + +R F++DL +L SL G Sbjct: 389 TVTIGIGSPKDSVFECHHSYDEARKALEMVRAATGGNRVTFWKDLGAYKILGSLYDTDTG 448 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 E P+ L RTL A R+N Q A +K L +H +TL+YR +I + Sbjct: 449 HSFYREYIGPIIDHDKR-RKSELLRTLKAMVRNNWQMKAAAKDLSVHYSTLKYRYAKICD 507 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 L D + + RL L ++L+L Sbjct: 508 LLEFDPEDSEQRLNLALSLKLY 529 >UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH14_9FIRM Length = 237 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 9/236 (3%) Query: 148 ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLT 207 + A++L ID+ RV ++E G+ + + ++QL++ ++ +A V Sbjct: 2 DIYNRAKKLNIDIEATRVAYLIEATYGK--DQNLVETVKQLEDT----TDDDFIAAVDEK 55 Query: 208 EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 +V++K + ++ K E+L+ +K G R+++G G ++RSY+ A Sbjct: 56 SIVLVKEV---CVKAQSKQFVKTAEKLLKNLKNVGINDARIAVGTIAKGIKDVSRSYKEA 112 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL 327 + + V K Y L + L+ L + + + T+ Sbjct: 113 QIALEVDKIFYENKEVVAYDQLGIGRLIYQLPLPLCKMFIKEVFGDYSPEEIDDETLATI 172 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +F +N+ TS+ L+IHRNTL YRL++I + T LDL NF+D + +AL + + Sbjct: 173 YKFFENNLNVSETSRQLYIHRNTLVYRLDKIQKSTNLDLRNFEDAIAFKIALMVVQ 228 >UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces RepID=B5HPQ6_9ACTO Length = 569 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 120/305 (39%), Gaps = 22/305 (7%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS--RLMHLLAQDSRLREELVMNL 139 +R G+++GV+ L ++ A+ L Q + L + RLR +L+ +L Sbjct: 273 VRPRGDVLGVLALDDPEATADEHTVFALDHAQRSLAQELMHMRELAEVELRLRRQLIDDL 332 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN 199 ++ E T A A+ +G DL + V +V + + ++ A Sbjct: 333 LEGTEETSA-YARAEAVGHDLQRTHYVVVVHWPGNAPDD----SFTRAVEQATAISATRP 387 Query: 200 LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGS 259 L+ +++ + + A H E G + + P Sbjct: 388 LITRRGDRMVLLTEARPYDDAVYTALAH------------ELGTPGGAIGVSTRCDSPDD 435 Query: 260 IARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD 318 I R Y+ A + V + S F+ DL L +L + + R L +L D Sbjct: 436 IPRCYQEALRALDVRQNSRQRSGTTFFDDLGLYRILGPGNDLRELEDFVREWLGQLIDYD 495 Query: 319 --NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLY 376 ++ L TLA +F + AL +HR+TL YRL RI E++ DL + D RL L Sbjct: 496 AEHDTELVETLARYFDCGGNYDDAAAALTVHRSTLRYRLQRIREISDRDLADVDTRLNLQ 555 Query: 377 VALQL 381 VA ++ Sbjct: 556 VATRV 560 >UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=Nocardioides sp. JS614 RepID=A1SC72_NOCSJ Length = 563 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 21/299 (7%) Query: 87 EIVGVIGLTGEPENLRKYGELVCM--TAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE 144 +++GV+ L + + ++ + +E +RL L+ + RLR +LV L+ E Sbjct: 271 DVLGVLALIDPAQRAGEQEQIAIEHGATVLAMELARLRSLIETELRLRRDLVDELLSGTE 330 Query: 145 NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIV 204 + AL E AQ LG DL +P V ++E + + +++ + L+ Sbjct: 331 ESSAL-ERAQALGHDLEKPHRVVMIEGNGRVHDSGAFFLAVRRAARQM---HAGTLLVAR 386 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSY 264 + +V+ S D E R V +KE G R R+ +G+Y GPG +SY Sbjct: 387 GESVVVL------SEADLDWEKFRTLV------IKELGGGRCRIGVGDYCQGPGGFPQSY 434 Query: 265 RTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMD--NNG 321 R A+ + + E + Y DL + +L + R L+ L D Sbjct: 435 REAQLALRMQGVAKAEDQATVYADLGVYRILAEVENPAAVERFVRLWLSPLLDYDARKGS 494 Query: 322 LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 L TL+ + + AT+ L +HR+TL+YRL RI E++G DL + D L +A + Sbjct: 495 DLVHTLSRYLECGGKYDATAIELSVHRSTLKYRLQRIREISGHDLSDPDTAFNLQLATR 553 >UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT1_9FIRM Length = 362 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 9/277 (3%) Query: 105 GELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPR 164 E E+ + Q + + + + + NL+ + A++L I + R Sbjct: 83 AESTATIGELAVCQVQSLLAAYAEKSDKNTFMQNLLLGSYSDVDAFNCAKKLHIATSVQR 142 Query: 165 VVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDA 224 V +VE + Q ++A+A ++ + +A T + + + T +++++ ++ Sbjct: 143 AVFLVE--TKQTKDENALATIRNIFSART----RDFITAIDDTGIIIIRELQST---ETY 193 Query: 225 EDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCY 284 ED L+ + V+ N + +Y+ A T + VGK + + Sbjct: 194 EDLESIAYMLVDMLNTEAMTSAWVAYSNLAEDISRLPDAYKEAHTALEVGKIFYADKNVF 253 Query: 285 FYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 Y L + L+ L + + T+ +F +N+ TS+ L Sbjct: 254 GYNQLGIGRLIYQLPVSICEMFIDEIFKEETLDSIDEETLITIRTFFENNLNLSETSRQL 313 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 ++HRNTL YR ++ GLD+ F+D L +A+ + Sbjct: 314 YVHRNTLVYRFEKLQRKFGLDIRAFEDALTFKLAMMV 350 >UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZWF4_9FIRM Length = 359 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 113/276 (40%), Gaps = 9/276 (3%) Query: 108 VCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVA 167 V E+ + Q + + + + L+ + A++L I + R V Sbjct: 85 VSTIGELAVCQIESILESYAEKNDKNAFMQKLLLGDYTDVEAFNRARKLHISSSARRAVF 144 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 +VE + Q + A+A ++ + +A T ++ + + ++V++ ++ +D Sbjct: 145 LVE--TRQSKDEHALATIKNIFSART----HDFITSIDNRGIIVVRELTST---ETYDDL 195 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 L+ + + V+ N ++ +Y+ A+T + +GK E + Y+ Sbjct: 196 ENIAHMLVDMLGTEAMTQAWVAYSNTANDLKDLSNAYKEARTALEIGKIFYAERNVFGYR 255 Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 L + LL L + +G + +F +N+ TS+ L++H Sbjct: 256 TLGIGRLLYQLPVSICEMFIQEIFGDESLDSIDGETLAIIRTFFENNLNLSETSRQLYVH 315 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 RNTL YR +I + GLDL F+D + +A+ + Sbjct: 316 RNTLVYRFEKIQKRFGLDLRTFEDAMTFKLAMLVSR 351 >UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSV2_9BACI Length = 532 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 127/314 (40%), Gaps = 12/314 (3%) Query: 79 NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM-LEQSRLMHLLAQDSRLREELVM 137 P+ ++ E+ G + +T + Y +L A ++ L + + + + Sbjct: 209 CFPVYVQEEVKGFV-IT-PLTHTPWYRQLFDYYALLLSLVMQEERKMEEVNGTFKHHFLH 266 Query: 138 NLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ-----LQNA 191 +L+ ++ AL + A+ G L P +A++ + + + L Sbjct: 267 DLLYNNFKHEQALRDQARTWGWQLEGPHHLAVIRIQANPEHEQHLPTGWHRETGEALIRR 326 Query: 192 LTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI-TRMKEYGQLRFRVSL 250 + + ++ +++ + G + + + L+ K+ QL + Sbjct: 327 IRQDLKEAIIEWFQGDIILIQEAICAKDGNVRRDRIKTYLHDLLVEAAKKDEQLLAEAGI 386 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP 310 G + P ++ +SY+ A + +G + E+ Y +DL + LL L D Sbjct: 387 GKCYPSPTALNKSYQEALMALKLGHEWSKENVVYHIEDLGVLRLLFYLNQDHLTEFSESY 446 Query: 311 LARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 LA L D+ G TL W H++ T+ AL +H NTL R+ +IS L +DL N Sbjct: 447 LAPLIQADSQGQTAYIHTLKMWIIHDMNVQETAAALHVHPNTLRNRMQKISSLLHVDLYN 506 Query: 369 FDDRLLLYVALQLD 382 +D + + +A+++ Sbjct: 507 HEDFVNISIAVKIH 520 >UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZ25_CATAD Length = 383 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 127/319 (39%), Gaps = 24/319 (7%) Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 A HGV + LP R G G + L +L + A M E SR LLA Sbjct: 79 PADPEHGVLPRVCLPARWNGVTYGYVWLLDVDGHLDD-----ALLASAMHEASRAGALLA 133 Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDL---NQPRVVAIVEVDSGQLGVDSAMA 183 Q +R+RE + L A+ E A DL ++ R + +V +++ S Sbjct: 134 QQARVRERMEERLQNLLSPDRAVAEQAAEEISDLGLVDRDRKITVVVLETRNQDWQSVPL 193 Query: 184 ELQQL-QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 L +L ++ L PE +++ +V V A+ + +E R++ Sbjct: 194 NLWRLPRSVLAAPETDHISLLVPEPHSV-------------ADIAERALELYRERLESDA 240 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + V +G S+R A+ + VG+ + DL + LL Sbjct: 241 RKDVLVGIGAPREDLAEARASWREARLAVRVGRAVPTFRPTAVWADLGIYRLLACGPQRE 300 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + + P R + L T+ + H T+ AL IHR TL +RL +I +T Sbjct: 301 LRDAVVDPAVR--RLLEEPDLLITVQTYLDHAGSAQQTAAALSIHRQTLYHRLEKIERIT 358 Query: 363 GLDLGNFDDRLLLYVALQL 381 GLDL + DRL L++ + L Sbjct: 359 GLDLADGRDRLRLHLGVSL 377 >UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G898_9FIRM Length = 315 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 114/287 (39%), Gaps = 9/287 (3%) Query: 95 TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ 154 TG ++ E + + Q R + ++ + ++NL+ ++E A Sbjct: 25 TGIALDIHIQPEASKEKIDESIRQIRSLCAAYKEKYNKNYFLLNLMTGTAQDCEISERAA 84 Query: 155 RLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKP 214 RL I +PR + ++E + ++ L + + V+ ++ +L P Sbjct: 85 RLHIRAVKPRYLFLLE------SSKKMDETVTEVLKQLFPFQEKIYLVPVNEFQLAMLYP 138 Query: 215 ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG 274 + +ED +I + +++ + ++ +Y+ + VG Sbjct: 139 VKDG---CTSEDIHDLAHTMIDTLSMEALTHVQIAYSDLIPDLHALPSAYKQTALALRVG 195 Query: 275 KQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHN 334 K E + + L + L+ L + L + + + + +F++N Sbjct: 196 KLFYSEQSVFPFNKLGIGRLIHELPEKLCEDFLFEIFGGITSEHLDKDTLAAIDKFFQNN 255 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + T++ L +HRNTL YRL ++ + TGLDL F+D + +A+ + Sbjct: 256 LNIAETARQLHMHRNTLIYRLEQVEKRTGLDLRQFEDAMTFKIAIMI 302 >UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID=Q2RLZ7_MOOTA Length = 558 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 71/323 (21%), Positives = 133/323 (41%), Gaps = 25/323 (7%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL--REELVMN 138 P+ + G I + G L + ++ A + + ++R + +L+ + Sbjct: 229 PIDVREHRYGYILVDG-QTPLSELNQIALEHAVTVTALQMVKEEAVVEARRSLQRDLLED 287 Query: 139 LIQAEENTPAL-TEWAQRLGIDLNQPRVVAIVEVDS------GQLGVDSAMA-----ELQ 186 LI L A+ LGI L +P+V+ +++D Q G A A Sbjct: 288 LIAGALRHRELAISRAEALGILLEEPKVIMAIDIDDFTGYLLHQPGAQEANAGVLKRRFH 347 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNS--FGRWDAEDHRKRVEQLITRM-----K 239 + N+ ++ + +V + PA G D R +++L + + Sbjct: 348 RAVNSCFMAFDRRVLTVQRSDSVVGILPANGREIRGAEDWRVLRGMLQELAASIQLKIAR 407 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 E + + + + P I+ Y+ A+T + + ++ + F++D+ L +L Sbjct: 408 ELDGVTVTIGISSIAADPMEISERYQEARTAIRLARRLNGKGTVAFWEDVELYHVLGQ-S 466 Query: 300 GDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 G+ L L + N L TL + +A++ L+IHRNT+ YRL R Sbjct: 467 GETLERFYRSVLGELDRPEVKNREELLETLRVYLECQGNVMASAAKLYIHRNTMRYRLQR 526 Query: 358 ISELTGLDLGNFDDRLLLYVALQ 380 I EL G DL + D+RL L++AL+ Sbjct: 527 IEELLGRDLDSPDERLALWLALK 549 >UniRef50_C0ZE84 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE84_BREBN Length = 732 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 147/399 (36%), Gaps = 34/399 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMD--------ARGRIIGSGDRERIGELHEGAL 52 + L K A+ IV ++ I D + + S D L Sbjct: 352 IKQLSLQNKGAETIVKTLSKMTGHPIYFADWLEQKMYPEKSLLFFSWDE----------L 401 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEI-VGVIGLTGEPENLRKYGELVCMT 111 L R + + G Q L + G I +G + L P + R +L MT Sbjct: 402 YTLLNKRRQPVSVNLFSPASGDDQRFCLYPLINGSIFLGCLML---PVDERGLSDLTRMT 458 Query: 112 AE-----MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVV 166 E ++L+ + + + + +L LI ++ N L + A +G+ V Sbjct: 459 IEQGSAVLILDLVKKQSISSVLYKRAHDLFQELIVSKGN--ELFDRAHSMGLQPQATYYV 516 Query: 167 AIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED 226 + + A + +L + + V L + + G D +D Sbjct: 517 IYAHLTQCH-DLALLEANIHRLITRFKWAFNKTQMFVYGFHNHVTL--LIRTLGSRDGKD 573 Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 R+R++Q + + + +G+ +G I++SY AK + S Y Sbjct: 574 IRERLQQAYDEWELGKEASLSIGVGSMASGIEQISKSYEEAKKA-ALYLTNRSRSGVVHY 632 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALF 345 +DL + L+ + + A L + + +T+ + + + P T+K L Sbjct: 633 KDLGINRLMLNQSQADIDAFIHDVFAPLWQDPEKYEEWEQTIITYMKCSQSPQLTAKELH 692 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 IH NTL RL ++ EL +DL + +D L L +A L +E Sbjct: 693 IHVNTLYQRLRKVEELLHIDLRDPEDLLKLQLACHLRQE 731 >UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVZ4_RHOOB Length = 539 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 22/304 (7%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRLREELVMNL 139 +R ++GV+ L+ A ML + + L ++RL +L +L Sbjct: 238 VRPGRTLLGVLYLSDPEHRATDLDTFALEHAATMLAVDMAHRRSLAETEARLSRDLGADL 297 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN 199 + ++ A A LG DL+ P+ V +V S + + + LT + + Sbjct: 298 LAGTDDDSA-YSRADALGYDLHTPQRVLVVHWGSDT----PVESVTEAFRRHLTATDSSA 352 Query: 200 LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF-RVSLGNYFTGPG 258 L+ + VL + D + V + +K+ + +G+ T P Sbjct: 353 LLVHGNEHRTGVLTAVM---------DAKADVNTVFASLKKSLGPAVGVIGVGSESTSPS 403 Query: 259 SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG----DWQANELARPLARL 314 ++ SY A + + KQ + + +L + +LDS + E PL Sbjct: 404 TLPESYTHAIRALDIRKQSLSPHGVALFDELGVYRILDSHSSTGDVEAFVREWLGPLLDY 463 Query: 315 KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL 374 ++ + TLA + + T++AL IHR+TL YR++RI ELTG DL + D RL Sbjct: 464 D-REHRSTMTATLAQYLECGGKYDETAQALRIHRSTLRYRMSRIHELTGRDLRSVDTRLN 522 Query: 375 LYVA 378 L++A Sbjct: 523 LHLA 526 >UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VVQ4_9BACI Length = 419 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 134/327 (40%), Gaps = 12/327 (3%) Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM----MLEQSRLM 122 + R L Q + L+ EI G + + Y ++ +T ++ + E + Sbjct: 81 LDRRLQYQWQAVRFDLKSNDEICGYLFVDEIGMTNFIYEQIKSITGDLSFAVLAELKKNK 140 Query: 123 HLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ--LGVD 179 LL Q R + + +L+ ++ L A+ DL+ P +V ++ + LG + Sbjct: 141 ELLHQGRRWKYAFLFDLLYGNIKDEQTLNAHAKTWEWDLSVPHMVLSFQLQNYDQLLGDE 200 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPA-LNSFGRWDAEDHRKRVEQLITRM 238 + ++Q+ N + + E++V P N ++ ++RV QL+T Sbjct: 201 VLLEKIQRTWELFLMRHLINPMILQKRDELIVCLPVDSNIKDLKNSIKVKERVNQLLTSA 260 Query: 239 KE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 Q F + G + + RSY+ AK +G E F+ D+ L LL S Sbjct: 261 ATILNQRDFYIGAGRAYHQGIELYRSYQEAKMARNIGIHETGEK-LSFFHDIGLMKLLYS 319 Query: 298 LRGDWQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 + L D++ L++ L + ++ T+ +LF+H+NT+ YRL Sbjct: 320 HDRSELHEFYKDTMGELLNHDDDTEAELKKALRTYIEQDLDISRTAHSLFVHKNTVRYRL 379 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLD 382 +I +L +DL + + VA ++ Sbjct: 380 KKIEDLLHVDLSDLSVIMDFAVAFHIE 406 >UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SGQ4_RHOSR Length = 534 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 20/303 (6%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRLREELVMNL 139 +R ++GV+ L+ + A ML + S L ++RL +L +L Sbjct: 233 VRPGQTLLGVLFLSDPEHRATDLDRVALEHAATMLAIDMSHRRSLAETEARLSRDLGADL 292 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN 199 + ++ A A LG DL+ P+ V V + + + LT+ + + Sbjct: 293 LAGTDDDSA-YSRADALGYDLHTPQRVLAVHWGPDT----PVESVTEAFRRHLTSADSSA 347 Query: 200 LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF-RVSLGNYFTGPG 258 L+ + +L + D + V + T +++ + +G+ T P Sbjct: 348 LLVHGNEHRTGILAAVM---------DAKTDVNIIFTALEKSLGPAVGVIGVGSECTSPS 398 Query: 259 SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTM 317 + SY A + + KQ + + +L + +LDS + L L Sbjct: 399 GLPDSYTHAIRALEIRKQSLSPRGVALFDELGVYRILDSHSSTGDVEAFVQEWLGPLLAY 458 Query: 318 D--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLL 375 D + + TLA + + T++AL IHR+TL YR++RI ELTG DL + D RL L Sbjct: 459 DREHRSTMTATLAQYLECGGKYDETAQALRIHRSTLRYRMSRIHELTGRDLRSVDTRLNL 518 Query: 376 YVA 378 ++A Sbjct: 519 HLA 521 >UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001972DEA Length = 391 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 7/260 (2%) Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +D RE + ++ + + A+R +D R V ++E D + Sbjct: 125 RFQKDRFDRENFIKRVVLGHLLPVDVDDQAKRFRLDGRVSRTVFLIETREDGGDSDVIL- 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 Q+ L + + + V ++ E+ + + + + G Sbjct: 184 ---QILRPLYGETAGGFLFKTAHRKYVYVRTMREGESTEGLEEIGRNI---VDVINTEGM 237 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 +S G ++ SYR A M +G+ ES Y L + L+ SL Sbjct: 238 QDACLSFGTPTKKLSGLSESYREACLAMRIGRIFSRESHVVAYDRLGMGRLIYSLPMPLC 297 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L A + + T+ +F ++ T++ L+IHRNTL YRL+++ +L G Sbjct: 298 RKFLDEVFACAGPDELDEEALMTIRQFFDDSLNIAETARHLYIHRNTLVYRLDKLQKLLG 357 Query: 364 LDLGNFDDRLLLYVALQLDE 383 L++ NF+D +LL + L + E Sbjct: 358 LNIRNFEDAMLLRLGLMVHE 377 >UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains C-terminal Fis domain) n=5 Tax=Bacillaceae RepID=B7GMN9_ANOFW Length = 410 Score = 154 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 85/404 (21%), Positives = 159/404 (39%), Gaps = 40/404 (9%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHEGAL 52 ++ R ++ I + DA R+I D R I L + Sbjct: 15 EEFADRVSELLQCPITIEDANHRLIAYSGHEHYTDPARTATIIHRRVPERVINSLWREGV 74 Query: 53 --LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYG-ELVC 109 +L V + + G+ I + + E++G I E+ ++ +L+ Sbjct: 75 IPKLLQSEEPVRVTEISE---VGLGNRIAISIWKNKEVLGFIWAIEMNESWTEHQFDLLK 131 Query: 110 MTAEMMLEQSRLMHLLAQDSRLR-EELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVA 167 A+ + + R +E L+ ++ + E +L + + V Sbjct: 132 QAAKAAKNLLLQLQIRKHKKEERIQEFFWKLLTGHFSSAHDIVEQCHQLNVHVYPFFSVG 191 Query: 168 IVEVDSG-QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED 226 I + Q V+ + L + L P L I +V++ P+ N +G E Sbjct: 192 IFQFQQHIQTQVERQIDYLLKTTQQLAIP----LYTIDHQRLIVLVAPSSNVYGEAHIE- 246 Query: 227 HRKRVEQLITRMKEYGQLRFRVS-LGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCY 284 + +T+MKE ++ + GN + IA+SY+ A+T + + + + + Sbjct: 247 --RFFRSFMTQMKERFRIDITMGAFGNVYECYTKIAKSYKEAQTVLKMKRAFPHQLANIQ 304 Query: 285 FYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATS 341 YQ L + D L + + L +LK D ++ L T+ + + T+ Sbjct: 305 SYQHLGMYQFFDLLFEQKRHGDFHNVALEKLKQYDAQHHTNLVETIETYLDCDSNVNETA 364 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 K L IH NTL YRL RISE+ +DL N +++ LY+ ++LD+ R Sbjct: 365 KTLNIHPNTLAYRLKRISEIGNIDLSNMSEKVKLYIDMKLDKYR 408 >UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PB06_CLOTS Length = 349 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 149/368 (40%), Gaps = 37/368 (10%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 + +V + + I ++D G++I SGD L +G + + R Sbjct: 8 RKVVKDYQKYVTEPIFLIDKDGKLIYSGDES----------LSKKEGIFAVNREFIERRD 57 Query: 72 HGVRQGIN-LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 QG+ + + G +G+ G + + L+ M+ E + Q Sbjct: 58 VYEWQGMTFYNIFVSGWRFLTVGIRGTGDKAKNMVMLLSMSFEHLSNQV----------- 106 Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 +E+ ++ L+ + + + + ++ + V I+E A+ + ++ Sbjct: 107 SKEDFLLKLLIGDLDRDEIEYYIEKYKFEEKDLYRVIIIESHD-------AIDDAFKIVG 159 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 + V + S V+L ++++ D K + L ++ ++ + + Sbjct: 160 HIFEKNSYQTVILSSNKFAVLLLESVSA-------DIDKATKTLKDTIESEVYIKIDIGV 212 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQR-MPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 N I++ YR A + +GK+ E YFY+ L LL L D L Sbjct: 213 SNKAYNFTDISKGYREASIALKLGKKIDNNERGIYFYRSYALEELLLELPEDVIKRFLEA 272 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 N+ L TL ++FR+++ TS+ L+IHRNTL YRL++I +LTG D F Sbjct: 273 LTDGELDYFNDDELVSTLNSFFRNSLNLSETSRDLYIHRNTLVYRLDKIHKLTGFDPKQF 332 Query: 370 DDRLLLYV 377 +D ++L V Sbjct: 333 NDAVMLKV 340 >UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C0ZQ97_RHOE4 Length = 429 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 124/313 (39%), Gaps = 8/313 (2%) Query: 77 GINLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLRE-E 134 + +P+R ++G + L T E E E++ TA+ LL + SR RE E Sbjct: 110 RVGMPIRYRNALLGFVWLLTSEGEVDEDQAEVLRRTADAAAMILHREQLLDELSRSRERE 169 Query: 135 LVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ---LQN 190 L +++ E + G+ P VV V + G + L + Sbjct: 170 LTRDVLSGERSLREDAANRLAEEGLLAAGPAVVVTVLLRPGDQSTLTERDRLSVAVGVDQ 229 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 RN+ + + +++ + + + + + V + Sbjct: 230 LRRRLPRNSAIQLDRPDHSLLIVSVAERSTQTHLDSLIVAARERVLSESGRQNIECWVGI 289 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP 310 G T + SY ++ + V + Y+DL + LL L D N + Sbjct: 290 GEPRTSVADVRESYEESRRSADVAQVVKVLGNVVRYRDLGVYGLLAELSEDRLENSIHSG 349 Query: 311 LARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 L L + +++ L TL ++ + TS+AL +HR +L YRL RI E+T DL N Sbjct: 350 LQSLLSHEDSKSEALLATLESFLDNAGDVKRTSEALCVHRGSLYYRLRRIQEITRADLAN 409 Query: 369 FDDRLLLYVALQL 381 DDRL L+++L++ Sbjct: 410 GDDRLALHLSLKV 422 >UniRef50_D1Y2S3 Putative transcriptional regulator, CdaR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2S3_9BACT Length = 536 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 127/326 (38%), Gaps = 22/326 (6%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELV---CMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 + L G ++G + + E L+ + ++L R +SR R E V + Sbjct: 208 VMLNGRLLGHLIFDADAEKLKDRWSEIPINQAKGALLLYFQRREVRHQVESRYRNEFVQD 267 Query: 139 LIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA------ELQQLQNA 191 LI A+ +L P+ V IV++D+ + + A++ ++ ++ Sbjct: 268 LITRNIRMEQEAWNRAKSFNWNLEGPQRVVIVDIDNYKSCLTRAISGGQGVNAIENSKSR 327 Query: 192 LTTPERNNL---------VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + R+ L A +S + + + + G + + R+ + ++ ++ Sbjct: 328 IYAIARSFLARLNGGKYPYAEMSDSIVFIFPSGDENGGGFFNDLLRRTLADMMKVIQTET 387 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 V +G+ SYR A+ + + ++ + + ++ + LL + G Sbjct: 388 GFTVTVGVGDPCNNVFDCPESYRQAQQGLELLRRSTGGNVIASWSEMGVYKLLYGVVGTP 447 Query: 303 QAN-ELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + + R L L L TL N + A+ +H NTL+YR +I Sbjct: 448 EGSGFMERYLGPLLNDERPAGATLLNTLQTTVSCNWNLKDAATAMNVHYNTLKYRWRKIC 507 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEER 385 ++ G+D DRL + +AL+L Sbjct: 508 DILGIDPSKSGDRLNVMIALKLYRMH 533 >UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUG4_RUBXD Length = 564 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 30/320 (9%) Query: 86 GEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS--RLMHLLAQDSRLREELVMNLIQAE 143 G G + + E L +V A +LE + R L + +R +L+ +LI Sbjct: 232 GSPAGYLWVDCEGSPLGTGDVIVLYWARRVLEGALGRERIRLETELGMRGDLLDDLIAGH 291 Query: 144 ENTPALT-EWAQRLGIDLNQPRVVAIVEVDSGQLGVDS---AMAELQQLQNALTTPER-- 197 + L + A LG DL++ + AIV++D ++ +Q+L+ L R Sbjct: 292 YGSVDLLLQRALYLGADLSRGALAAIVDIDEFARYLERRRLKEPAVQELKRRLADAVRLQ 351 Query: 198 ------NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY-----GQLRF 246 L+ S ++ L P+ + R+R +L R++ Y L Sbjct: 352 ARQLFSGFLLGPRSDNVILFLPPS----PEAPPDTLRERALELSGRVQRYVRGLLPDLTV 407 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN- 305 V +G Y P + +Y A+ + +G + S +++ LL + + Sbjct: 408 SVGIGRYREDPAELPEAYSEAEMALRIGHRIKGPSSVSTFEETGTYKLLFRVLQESPEEL 467 Query: 306 -----ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 E P R + L +TLA++ R++ T+ LF HR+T+ YRL RI E Sbjct: 468 ESFYAETVEPAVRYD-LRYGTGLVQTLASYLRNDASTSRTASELFTHRHTIRYRLERIRE 526 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 LTGLD+ +DR L + ++ Sbjct: 527 LTGLDVDRSEDRERLALGIK 546 >UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32213 Length = 403 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 119/316 (37%), Gaps = 10/316 (3%) Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH-LLAQDSRL 131 G+ + LPLR +G ++G + L EP+ L L L D R Sbjct: 80 GMAARVCLPLRFDGLLLGYLWLIDEPQPLDAAALAASRRCAAALAAVLAHARRLEDDERE 139 Query: 132 RE-ELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 RE LV +L+ + + V + + + A +L+ Sbjct: 140 REARLVRDLLLETGDVEEAAARLGTGAFARARGYVAIVATAEGSTVADGPAATDLRL--- 196 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT----RMKEYGQLRF 246 AL + VA V A + D +D ++R L+ ++ + Sbjct: 197 ALAADQLRRSVAPRHALAAVGGGEAYLALAFDDPDDPQRRASALLDAAREQLPDARDGTV 256 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ-AN 305 V++G + S A+ + V + + + L + L GD + Sbjct: 257 LVAVGGVRATVAQLRASCTEARHALRVAQAVPETAAPARWDALGAYRTVAELVGDREPLG 316 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 L L RL + L TL A+ H A + ALF+HR++L RL+RI ++ G D Sbjct: 317 MLPSALVRLLDERDGETLLATLEAYLEHGCDAQAAAGALFLHRSSLYNRLHRIEQIIGRD 376 Query: 366 LGNFDDRLLLYVALQL 381 L DDRL L++ ++L Sbjct: 377 LRRGDDRLELHLGVRL 392 >UniRef50_C0ZJB8 Putative transcriptional regulator n=2 Tax=Bacillales RepID=C0ZJB8_BREBN Length = 564 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 65/408 (15%), Positives = 160/408 (39%), Gaps = 44/408 (10%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEG----ALLVLSQGRVV---DIDD 65 I + I+ I ++D ++ + H + L LS+ R V D + Sbjct: 155 RIASELSETINNPILILDQDWHLLHYTEI-----WHNPIPLDSCLTLSKNRPVFTRDFTE 209 Query: 66 AVARHLHGVRQGIN--------------LPLRLEGEIVGVIGLTGEPENLRKYGELVCMT 111 +V R++ +++ I LP+ + I G I + L ++ +V Sbjct: 210 SVPRNISQIKKSIKRIYHAKDYEIKCRILPVAVANHIYGYIVVWQTVWELTEFDYIVLEQ 269 Query: 112 AEMM--LEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAI 168 A + LE+ + + ++R++ +L+ + ++ +L G+ + + Sbjct: 270 ASTIVALERIKAREIEEVKLKIRQDFFDDLLTGKITSSDSLQTLCDLHGLQSSYMYFCMV 329 Query: 169 VEVDSGQLGVDSAMAELQQLQNAL-----------TTPERNNLVAIVSLTEMVVLKPALN 217 + ++ +L + + + + + ++ + +++L Sbjct: 330 MNIEPIELENLEDIIDRKYELDRIAKKCVDLVYDNSSKAPGEITCFYRNNRIIILIGQNE 389 Query: 218 SFGRWDAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 A + ++ +L + + + + F + +G + S+ +S+ A + + ++ Sbjct: 390 QKPVVSASEAKQFANELYSALVDKIKKTLFFIGVGRQYKNIASLHKSFTEAHEAIRLMQK 449 Query: 277 RMPESRCYFYQDLMLPVLL-DSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRH 333 + + D + L +++ + + L +L D L TL +F + Sbjct: 450 FNSKGDVSHFDDYSVYHFLGSNIKDIELEDFFLKRLGKLYEHDQEFGTSLMVTLDNYFLY 509 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 N +KA+FIHRNT YR+ +I E+ +DL N ++ L + +AL++ Sbjct: 510 NQNVSEAAKAMFIHRNTFIYRIEKIKEILNMDLKNSEEMLQIQLALKI 557 >UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEC1_9FIRM Length = 550 Score = 150 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 132/322 (40%), Gaps = 16/322 (4%) Query: 74 VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS--RL 131 V I P+ + + G+ + + A + L +D+ RL Sbjct: 227 VSAQIIAPVMSGDTVTAYLSAVGDSQTFSELDLAALYQAATLCSLVLLKEAAVRDTEDRL 286 Query: 132 REELVMNLIQAEENTPALT-EWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL-- 188 + + + +L+ + + A+ LG + V + + + + + + E+ Q+ Sbjct: 287 KGDFLDDLLSGNYPSEEIVLRRARFLGYESIHRGVFMLFKANEFETLEELSEPEIIQIKT 346 Query: 189 ------QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q AL +++ + S T +V++ FG D E + E++ +MK Sbjct: 347 DLISLIQEALQQKNIHSICRLQSATVIVLILEEGFLFGDADVELATELKEEIEQKMKR-- 404 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + LG + G +A+S+ + + + ++ + + + DL LL S Sbjct: 405 -VTVSAGLGRPYRELGKLAKSFAEGEKALRIAQKIGDDRGIFRFSDLGAFRLLLSENEAE 463 Query: 303 QANELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + R+ NNG L ++L + N + LFIHR+TL+YRLN+I+ Sbjct: 464 LNAFYRDTVERIVEDDRKNNGELLKSLKVYLDENRNIKEAASKLFIHRHTLKYRLNKIAG 523 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 LTG DL N +D L L++ + + Sbjct: 524 LTGRDLDNSEDLLNLHLGILIS 545 >UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FU02_DESHD Length = 404 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 129/312 (41%), Gaps = 13/312 (4%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT--AEMMLEQSRLMHLLAQDSRLREEL 135 P+ + + G + + E ENL + + +++E + L LR+ Sbjct: 89 YCWPI-VNQKKEGYLWILTEKENLSAEEMEITEYLRSALLVEIVKKQEQLKLKQYLRDGS 147 Query: 136 VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTP 195 ++NL+ + L Q G +L +V I+E + G ++E++ Sbjct: 148 ILNLLFNNSD--QLETMGQVWGRNLLITHIVMILEGQTKVPG--HGLSEVRTKAENFIEA 203 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWDA---EDHRKRVEQLITRMKE-YGQLRFRVSLG 251 + V + +VVL P D ++ + + + ++E ++ S+G Sbjct: 204 KYPGTVTGMIGKHLVVLFPYEKKTKEKDGHTNDNWKNIPRKAYSELQEILDDVKLWASVG 263 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL 311 + + + RSY+ AK + +GK + + F+ +L L + R + L Sbjct: 264 SIYPDQPLLYRSYQEAKVALEMGKVLGKKEKLTFFNELGAIRLFYNQRKQDLRDFFEETL 323 Query: 312 ARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 + D N+G L TL ++ A +K +FIH NTL YRL ++ ELT L + Sbjct: 324 GPVLKYDRTNDGNLLLTLWHYYASGGDISAATKGMFIHANTLRYRLRKVEELTASSLDDQ 383 Query: 370 DDRLLLYVALQL 381 + R +Y AL++ Sbjct: 384 EVRFNIYAALKV 395 >UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQF7_DESHD Length = 562 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 70/415 (16%), Positives = 158/415 (38%), Gaps = 33/415 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGD--------------RERIGE 46 + L+ Q +V + ++ I + DA+ +I + + RI E Sbjct: 143 LINLVLENNTIQTLVNKISELVGNTIIIEDAKLNVIAVSNVEGDIQSNLDSPVFKARINE 202 Query: 47 ------LHEGALLVLSQGRVVDIDDAVARHLHGVRQG-INLPLRLEGEIVGVIGLTGEPE 99 L + G + + H + P+ I G I L + Sbjct: 203 HFRQNVLKSNFYKAVKMGEKKEHLEINLTIPHSEKIRNYMFPIFSNKTIYGFISLLESQQ 262 Query: 100 NLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLRE--ELVMNLIQAEENTPALTEWAQRLG 157 +V + + + L Q + ++ L+ ++I +T + E+ L Sbjct: 263 IYSSTDLMVLKNSSTAIALQLMKQYLNQQTYRKKNLALIEDIIHGRIHTQIVFEYD-FLN 321 Query: 158 IDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ----NALTTPERNNLVAIVSLTEMVVLK 213 I+L P V +++ L + + L N ++ + + +L Sbjct: 322 INLANPMVAVLMDYAEPNLENNYFWERSEDLITMTIRKHLYKHFNQVIIGNNGSLFTLLV 381 Query: 214 PALNSFGRWDAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 + ++ VE + + K++G+ +F + +G + P + +S++ AKT + Sbjct: 382 SFQPNQIEKVNSLVKEAVEHALAELAKQFGEDKFSIGIGGAYPQPELVEKSFKEAKTALS 441 Query: 273 VGKQ-RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLA-RLKTMD--NNGLLRRTLA 328 V K+ ++ ++++ + ++ ++ + E L LK D N+ +L TL Sbjct: 442 VAKKCKIRRGNVLLFEEIGIHRIIFMVQDTAKIREFCDDLLLELKKYDEKNSDVLLETLH 501 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + + T+K +F+H NT+ YR+ +I +L DL + ++ AL+ ++ Sbjct: 502 EFLLCDCVVKETAKKMFVHPNTVTYRIKKIKQLLKHDLALPEFKMAYLFALEAND 556 >UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELK2_OCEIH Length = 415 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 128/321 (39%), Gaps = 14/321 (4%) Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD- 128 G+ I + +R + EI+G I + + + A +++ L + Sbjct: 96 QEVGLGNRIAISVRKQNEILGFIWAHTSDKTFTEEEVFLFKEAATYVKKYFLKNRQHNRK 155 Query: 129 -SRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 + L++ + NT + A++ I LN + + ++ D +++ Sbjct: 156 SEEGYRDFFWQLLRGDLHNTDDINRQAKQYNIQLNGDKTIVVIRFS------DEVNEQME 209 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 + L+ + V + + + ++QLI R+ E L Sbjct: 210 KHAYYLSESQVKVNVITRLFDDNDFIMLVGLPKESNSKQLLYDFIQQLIQRIGEQLNLNT 269 Query: 247 RVSLGNY-FTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQDLMLPVLLDSLRGDWQA 304 + G + P I +S+ AK + + +Q + Y+DL + +D+L + Sbjct: 270 VLGAGGLRYEQPQLIEQSFHQAKNVLKLQEQIPERLNDILLYEDLGVLQFIDTLAETRKD 329 Query: 305 NELARPL-ARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 P RL++ D + L TL + + + +K LF+H NT+ YRL RI E+ Sbjct: 330 EHYYNPYMERLRSYDKRHQTSLLETLDIYLQCDSNVYRAAKELFVHPNTMNYRLKRIKEV 389 Query: 362 TGLDLGNFDDRLLLYVALQLD 382 +G+DL N + + +Y+ L +D Sbjct: 390 SGIDLKNANQKTNIYLDLLID 410 >UniRef50_A1SCB3 Transcriptional regulator, CdaR family n=4 Tax=Actinomycetales RepID=A1SCB3_NOCSJ Length = 466 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 14/280 (5%) Query: 108 VCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVA 167 V AE E R L+ ++ LR EL+ +L++ + + L E A+ G+DL + VA Sbjct: 173 VAAFAEGHAEAGR--ELVRREETLRRELIEDLLRGDAHLSDLVERAEPFGLDLTRAHQVA 230 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLK------PALNSFGR 221 + + + +A L+++ L +++ +VV+ S G Sbjct: 231 LAQPGKRLPSIAAATTSLERV--VLDRFGDRDVLVATKEGWVVVIALADATGAPPTSGGL 288 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 D K V ++R++ +RV++G G IARSY A+ M + + + Sbjct: 289 GTTGDLGKIVYGELSRLRR--GRPWRVAVGRAHPGAYGIARSYEEAREGMTMATRMQLDR 346 Query: 282 RCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGL-LRRTLAAWFRHNVQPLAT 340 +DL+ +L + + L L L TLAA+F T Sbjct: 347 PIVETRDLLTYRVLAR-DQPALVDLVHSVLNPLHQARGGAQPLVETLAAYFNCGCVATTT 405 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 + L + + YRL+R+ LTG D + R L A+ Sbjct: 406 ATTLHLSVRAVTYRLDRVKALTGFDALDPAHRFTLQAAVL 445 >UniRef50_B8FTC8 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FTC8_DESHD Length = 406 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 118/309 (38%), Gaps = 11/309 (3%) Query: 86 GEIVGVIGLTGEPENLRK--YGELVCMTAEM-MLEQSRLMHLLAQDSRLREELVMNLIQA 142 G +G I + + ++ + L+ A + + + L + S+ + + +LI Sbjct: 93 GRTLGYIFMLTDDDSPDPTHFKPLLDYAASLCAVHLQNRLELKQEQSKFKNAFLYDLIYG 152 Query: 143 E-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL--GVDSAMAELQQL-QNALTTPERN 198 + + + G + +P + + + M L ++ + Sbjct: 153 NLKRNDEIIATGELWGWNFRRPHTIMVFLLPEPDFYTTEWHLMDVLSRIVEQNFIEIYYK 212 Query: 199 NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE-YGQLRFRVSLGNYFTGP 257 N I+ E+++ P E+ ++++++++ + +G ++ Sbjct: 213 NPAVILRQNELILFVPMQTDKPAVQTEELLVFADKILSQVQNTELKGLAACGVGQAYSEA 272 Query: 258 GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTM 317 + RSY+ AK + +GK F++DL L +L L L Sbjct: 273 TVLFRSYQEAKVALEMGKLLGIP--IPFFRDLGLERILYKHDLQDLKEYYLHVLGELHKQ 330 Query: 318 DN-NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLY 376 D+ + L L ++ + T+KALF+H NTL YRLN+I + G L + RL + Sbjct: 331 DDQDSSLVTILESFAENQFDVGKTAKALFMHPNTLRYRLNKIENILGKPLTDNHARLDIM 390 Query: 377 VALQLDEER 385 A ++ Sbjct: 391 AAFKIKRLH 399 >UniRef50_A1SPN8 Transcriptional regulator, CdaR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SPN8_NOCSJ Length = 552 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 117/314 (37%), Gaps = 13/314 (4%) Query: 81 PLRLEGEIVGVIGLTGEPE-----NLRKYGELVCMTAEMM-LEQSRLMHLLAQDSRLREE 134 + L G I + + +L ++ +V A ++ E RL + + R R Sbjct: 224 AIELADHREGWIAVINADDSPHGHDLAEHRVVVEQAATIVGTELLRLRSVERAEERARGN 283 Query: 135 LVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT 193 V L+ + L A + V I D+ + + + AL Sbjct: 284 FVHALLHGRFSNHADLVARASHHDFAVEGRYGVVIARSAGLIAERDAPVRLAEMAREALR 343 Query: 194 TP---ERNNLVAIVSLTEMVV--LKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 +R L A+V VV + PA + A + R L R+ Q V Sbjct: 344 VAPVDDRQTLTAVVGDVLAVVRQVSPAGRTHPDPTAHELRDYATGLERRLARLLQRPVHV 403 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 + G G I SYR A+ + +G++ E C F + LL R + Sbjct: 404 AYGRPVKGAEQIVLSYREARIALDLGERLRMERVCGFADLRVDSALLGLAREPAGKSFFT 463 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 L L+ D +G L + +++ L IHRNT+ Y+L+RIS L D+ Sbjct: 464 DVLEPLRQ-DRSGTLLDVAREYVAAGGNVNESARRLGIHRNTMLYKLDRISRLLERDIRE 522 Query: 369 FDDRLLLYVALQLD 382 D + +++AL+L Sbjct: 523 ADTQFTIWLALRLS 536 >UniRef50_D2AXV2 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXV2_STRRD Length = 514 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 11/283 (3%) Query: 102 RKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLN 161 +V + A + LE+SRL + R+ ++L+ L + N P + L I+ Sbjct: 239 EHEDLIVELAALVALERSRLEAAQRIERRVLDQLLGLLTSGDANLPGVVSRLHTLHIETE 298 Query: 162 QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGR 221 + + V+ + +A L +L L VA E V L P G Sbjct: 299 DGLLAVALAVEGTDRADEVGVAVLDELLRPLAPG-----VATAVGGEAVALVPL---AGN 350 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 AE + T G R + + + TGP +++ A+ + + Sbjct: 351 SAAELTSHMLAGAATLEAGLGDARITIGVSSVTTGPAALSSLIEEARHARTLAELGEGRV 410 Query: 282 RCYFYQDLMLPV-LLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPL 338 D+ L+ ++ G+ + + R L RL+ D + L TL + + Sbjct: 411 SAITGDDVSSHRSLIAAIPGELRRSFRTRLLGRLEEYDAAHQTELVETLETFLEESGSWA 470 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 AT+ L +H NTL YR+ RI ELTG L D+R+ +AL++ Sbjct: 471 ATADRLHVHVNTLRYRVKRIEELTGRSLNALDERVDFLLALRM 513 >UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKH8_CLOCL Length = 544 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 74/403 (18%), Positives = 154/403 (38%), Gaps = 29/403 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIG----ELHEGALLVLS 56 + L+ + IV +II+ I + I + + + L Sbjct: 141 LMDLMLNGANIEKIVDVLAQIIEKPILISLE----IPKSEISNFHFIEKKFEDTLLKSAR 196 Query: 57 QGRVVDIDDAVARHLHGVRQGIN--------LPLRLEGEIVG--VIGLTGEPENLRKYGE 106 I D + I+ + + G I P + + Sbjct: 197 TYNSTHITDNSNTLFQKSAEFIDDAYVNKYVKAIVINNISYGHLFIWSFESPLDSLDFSI 256 Query: 107 LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRV 165 + + + E + + +L ++ ++ + NL+ + T E +D + + Sbjct: 257 INNILVPIQNELVKKVSVLEIENSHKKNFLDNLLSKDLKTREKALEITNEFHLDRDNSFI 316 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN----LVAIVSLTEMVVLKPALNSFGR 221 + ++ Q + + +L + R LVA + +L + + Sbjct: 317 AFSITLEKNQSLYSTKKQLIPKLFYYVENLIRKKGIIGLVANDCQSVYFILSFNQSEDIK 376 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 ED K +E + ++ + L +++ +G + G ++ SY AK ++ +G + +S Sbjct: 377 NQIEDFCKSLENTL--IENFQTLDYKIGVGRCYEGLENVRCSYEEAKNSIGIGNRLNKKS 434 Query: 282 RCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPL 338 FY L + LL + + + +L D + L +TL +F+ N Sbjct: 435 MI-FYDKLGVYTLLCHDGLNNELELFYNNTIKKLVDHDKKKSTELVKTLEVYFQCNGNLN 493 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +K LF H NT+ YR+NRI+E+TG+D+ N ++RL L +AL++ Sbjct: 494 KIAKVLFTHYNTILYRINRINEITGMDIKNEENRLNLEIALRI 536 >UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD4_ALKMQ Length = 350 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 158/369 (42%), Gaps = 41/369 (11%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGEL-HEGALLVLSQGRVVDIDDAVARH 70 + I+ IIDT IN++D G I S D +IG ++ L+ G +++ + + Sbjct: 7 KSIIHSLKDIIDTEINLLDENGYIFHSTDTNKIGNYDNQIISFELNDGFLIEKQEYIYCS 66 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 + + + + + G E+ +K+ +++ + + Sbjct: 67 YNSYEEDKCI-----------LSIKGINEDTQKFAKMIGIFL-----------GTDIKNI 104 Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 R + + +++ + ++ ++ I + ++E ++ M ++++ + Sbjct: 105 SRNDFIKSILLNTISDDSIKNVCEKHHIVTQGQVQIIVIE------ATENLMGTVEEILS 158 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 AL + E++ +K + + + + L + ++ + Sbjct: 159 ALLS------------DEIIRIKSKYFAVIKRITDKNNDFPTFLSETISSELLYEVKIGI 206 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP 310 G SY+TA+ + +GK +P + Y ++ L +P+++ ++ + + + Sbjct: 207 GVIVDDVYDWHFSYKTAENFIEIGKVFLPSHKTYSFKSLTIPLMISKIQANDLEEIMKQF 266 Query: 311 LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 +K++ +N L T +F++N+ T++ LF+HRNTL YRL++I ++TG DL F+ Sbjct: 267 DCNIKSLFSNNELLNTAFIFFKNNLNISDTARDLFVHRNTLIYRLSKIQDITGYDLRIFE 326 Query: 371 DRLLLYVAL 379 D +L V + Sbjct: 327 DAILFNVMI 335 >UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UQQ0_9BURK Length = 604 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 79/387 (20%), Positives = 153/387 (39%), Gaps = 22/387 (5%) Query: 18 TMRIIDTNINVMDA-RGRIIGSGDRERIGELHEGALLVLSQG----------RVVDIDDA 66 ++D ++ V+D G I S +R G + A + G R + + Sbjct: 207 LSDLLDASVLVIDFYGGAIFSSRSPDR-GMYDQDAWRAVLDGPAGMRLREDVRELTTRNT 265 Query: 67 VARHLHGVRQGINL-----PLRLEGEIVGVIGLTGEPENLR-KYGELVCMTAEMMLEQSR 120 R V +G L PL ++GEIVG + G+ E+ + + + ++ R Sbjct: 266 QRRLAFEVSEGQKLSASVEPLSVDGEIVGALLSFGDGEHNDLRMLAIENAKFAVSVQLMR 325 Query: 121 LMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 + ++R EL +++ + + E A+RLG+ L P + +V+ + Sbjct: 326 SVIRFRAETRTLTELFFEIVERRWRDANDVLERARRLGLSLTTPTRLLVVDYPHRPAASE 385 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV-EQLITRM 238 + AE ++ L ++ + I +V L P A +L + + Sbjct: 386 NRSAECNRVTAMLAAQQKLVVHTITVGEGLVCLLPLDGGTDESVANAAMTAFGRRLCSTL 445 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 + LG+ F G ++A+ + + + + LP+L+ + Sbjct: 446 APLLGREPILVLGDTFAGLEALAKEWERCWRMIKIARGMGKSGALSVPDLGPLPLLIGAA 505 Query: 299 RGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + L D ++ TL+A+ RH + A + A+ +H TL YRL+ Sbjct: 506 DSPDVRAFMTGTIGPLIEYDQGHHTPYMETLSAYIRHGCRSQACADAMGLHVTTLRYRLS 565 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDE 383 RIS+L G+D+ + R + +ALQL Sbjct: 566 RISDLFGIDVETPERRFAVELALQLHR 592 >UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L341_THERP Length = 534 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 84/383 (21%), Positives = 148/383 (38%), Gaps = 49/383 (12%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLV-LSQGR-VVDIDDAVARH 70 +V ++ +I V + G ++ R G + A V + GR + + +A Sbjct: 154 RLVRTLGELLGRSITVEEPDGTLLAYYQR---GPYEDAARQVTIESGRAPAWLQEGLAAR 210 Query: 71 LH-----------------GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE 113 + G+R+ + P+ L GE+VG++ + E L A Sbjct: 211 GYLPPQGTQPYRVPAIPELGLRERVVCPIWLHGELVGLVWIIEGGEPLSGLDLRAAEHAA 270 Query: 114 MMLEQ--SRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVE 170 ++ ++ L ++RL + +I+ + +P E A+ LG D + VA++ Sbjct: 271 LVFALLFAQQRELAQLEARLGYAFLNTVIEGRFSGSPEELERARALGYDPARRYRVAVIA 330 Query: 171 VDSGQLGVDSAMAELQ---QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 + L V++ Q +++ L LVA V + ++ + E H Sbjct: 331 LGEPPLTVEAFQRREQVALRVRRVLRQLAAAPLVATVHDQVIALV----------EQEAH 380 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 +R+ Q E G GP + RSYR A T + + Y Y+ Sbjct: 381 LERIWQ------ELAGCGLTAVAGRAHAGPDGVRRSYREACTLLEY----VSRPGLYRYE 430 Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 DL+L +L QA L+ L L+ + L TL W R A ++ L +H Sbjct: 431 DLVLERVLAGDSEARQA-FLSLWLGPLERARHGDRLVETLVHWVRARFSVNAVAEELGVH 489 Query: 348 RNTLEYRLNRISELTGLDLGNFD 370 NT+ YRL + L G DL + + Sbjct: 490 PNTVRYRLEQAGTLLGRDLSDPE 512 >UniRef50_A8RJG3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJG3_9CLOT Length = 316 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 136/337 (40%), Gaps = 33/337 (9%) Query: 44 IGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK 103 +GE++ A+ L+ V + + G +PLR + +G + L G + + Sbjct: 1 MGEMNLLAIEALNINSKVTVSMDSKIQ----KAGAAMPLRFQKSRMGAVVLQGAGSSSSQ 56 Query: 104 YGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQ 162 EL+ T E++ E+ L ++ R++ + + + T + + LGID+ Sbjct: 57 LAELLSKTIELLYEELILSKKKQNRTQERDQFLYEWLHLQSDYTENFIKRGEHLGIDITG 116 Query: 163 PRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 + ++E L +++ +QN L +R+ L+ + +++LK Sbjct: 117 NHTIILMERKQDDLFTSTSI-----IQNLL--DDRDILLPLSQDQNLIILK--------- 160 Query: 223 DAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 + E K+ ++I + +G + +Y+ A ++ +GK P+ Sbjct: 161 ENEHFEKKYNRVIA-----AGHNCHTGI---CSGSAHLHTAYQAALESLKLGKILFPDEH 212 Query: 283 CYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 + ++ + L + L L + L N L T + R N Sbjct: 213 LHCFEKMKLAIALSKTPIPG----LEDSFSLLVAKGRNAQLADTAITYIRLNGDIQKICD 268 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 L IHRN++ YR+ RI E+ G +L ++ D L LY + Sbjct: 269 KLHIHRNSIPYRIRRIHEICGRNLMDYYDMLCLYASF 305 >UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB53 Length = 402 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 89/396 (22%), Positives = 136/396 (34%), Gaps = 29/396 (7%) Query: 12 QDIVARTMRIIDTNINVMDARGRII-GS---GDRERIGEL--------HEGALLVLSQGR 59 QD+V I ++ V D R I+ S GD +R+ A +L+QG Sbjct: 7 QDVVDDLAERIGRSVAVNDPRVHILCASRHFGDEDRVRVRAVLQRDAGSAAAGHILAQGV 66 Query: 60 VVDIDDAV--ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE 117 V R G+R + P+R ++G++ + +L A L Sbjct: 67 DRWTAPGVIPPRADLGMRARLCAPIRWRHHLLGLLVVIDPDGDLPTSSIDAVTAATHTLA 126 Query: 118 QSRLMHLLA--QDSRLREELVMNLIQAEENTPALTEWAQRLG-IDLNQPRVVAIVEVDSG 174 A + RE + L+ + + A G + V + Sbjct: 127 PLMYQDFAAGDTERTAREGALRQLLDSSDTVRETGRDALARGGWLPSSRYATVTVATVAA 186 Query: 175 QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 D A L+ L + TE ++ P D + + Sbjct: 187 DSPADHGGAAEVALRTGLERVAADRSW----RTEFCLIGPHGVLLTFSDRPLPDESLGAR 242 Query: 235 ITRMKE------YGQLRFRVSLGNYFTGPGSIA-RSYRTAKTTMVVGKQRMPESRCYFYQ 287 + + E G + +G G A SY A R ++ Sbjct: 243 ASALLEQARSVLAGTAQCVAGIGETADGGAEAAWMSYEQATGAARTAGVRPGGDDIVHWE 302 Query: 288 DLMLPVLLDSLRGDWQANELA-RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 L L L D L PL L D +G L TL A+ H T+ AL + Sbjct: 303 QLGALAPLSLLPPDRLTPALLPGPLRTLLAQDPSGRLTETLTAYLDHAGSAPRTAHALHL 362 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 HR +L YRL RI+ELTGLDL + D+RL L++ L+L Sbjct: 363 HRTSLYYRLQRITELTGLDLADGDNRLTLHLGLRLH 398 >UniRef50_D2M035 Transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M035_BACS4 Length = 560 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 131/389 (33%), Gaps = 23/389 (5%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 I+ I+ I +++ R I+ + + + DID+ L Sbjct: 154 KIIESLTNILRVPIILLNYRLDIMANSHELNKDTFFDIYWHIHETVHQEDIDEYKVIELP 213 Query: 73 GVRQGIN-----LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL--L 125 P+ + G I L G P L A ++ + Sbjct: 214 KSNMNTYEKLSIYPIHSTNQQKGYIILFGSPLTNDYSSTLALEQAANVISYEFMKIHALE 273 Query: 126 AQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSG---------- 174 R++ E +L++ +N + + V ++D Sbjct: 274 QHSRRIKNEFFTDLVEGTMKNEDEIFNRGSEYDLKKELHYVCITSKIDDASDFYVDAHPL 333 Query: 175 --QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 ++S ++ +L ++L + + + + ++ L + +F ++ + Sbjct: 334 QSDKEINSKRDQIYELLSSLLASQFETSI-VFNKGDLFTLLIGMENFHETAEKNLLDTIH 392 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 + + E + NY +I+ S++ A + G + + Y+ L Sbjct: 393 VIQMDIYETQHTALSFGVSNYTDNIKNISTSFQEAVDALRSGYRESKKRFIKTYRVKELA 452 Query: 293 VLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L ++ L L L TL+ + +N Q T+K++F+HRNT Sbjct: 453 ELFRAIPTQKLEEFYKSSLKDLAFPPEREKEDLMNTLSIYLNNNCQIAETAKSMFVHRNT 512 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVAL 379 + YR+ + ++ G+D D+ L L +A Sbjct: 513 VIYRIKKCEKILGIDFKGEDETLRLRIAF 541 >UniRef50_Q0S5V7 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S5V7_RHOSR Length = 470 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 118/321 (36%), Gaps = 21/321 (6%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYG--ELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 P+ G G+I L L + L ++ + + A +S+ R + + + Sbjct: 151 PVVAGGTDHGLIVAFVAEGGLGPVTVQALERAATVVALAVTKQLAVSAVESKFRGDFLRD 210 Query: 139 LIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE- 196 ++ T A +TE +L D+N+ VV + E+D + + + Sbjct: 211 VLNGTAGTTAQITEHCAQLEWDVNRSMVVVVAELDPDADPATAGRTTPTPVAGRMPQQRL 270 Query: 197 ----------RNNLVAIVSL-TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 R+ +V E+V L P S + ED +T + G+ Sbjct: 271 TAAWQQVVRRRDRFAPVVGFSHEVVALMPVDGSDTKTVIEDLI----AAVTGDRGGGRHS 326 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 F + I ++Y A+ + VG++ + L + LL + + Sbjct: 327 FCTGVSRVIDSVAGIPQAYAQARKAVTVGRRMRGNGTVAHFDGLGVHRLLSLVDDSAELQ 386 Query: 306 ELA-RPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A L L D LR+TL A N T++ L H NTL YR+ ++ + G Sbjct: 387 AFASEVLGSLADDADEAIDLRQTLQALLDTNCNVAETARVLHFHYNTLRYRIGKLESIVG 446 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 + RL + +AL++ E Sbjct: 447 PFTTDPILRLDVALALRVVEM 467 >UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FPE7_DESHD Length = 413 Score = 144 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 136/324 (41%), Gaps = 30/324 (9%) Query: 76 QGINLPLRLEGEIVGVIGL--------TGEPENLRKYGELVCMTAE--MMLEQSRLMHLL 125 + LPL +G I + + +P++L + A ++L + Sbjct: 95 PFVYLPLLAGDYCLGYIFVLETYPLADSLKPKSLSAEDKETIFEASMPLLLCLKNSSEVS 154 Query: 126 AQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS-AMA 183 + + R++ + +++ ++ A + E A+ G +L + ++++ + Sbjct: 155 LRQEQYRDDFIRDILYNNYDSKAAIHEKAKSWGWNLQGSLLALVIDLPDRDFKTAREILP 214 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEM--VVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 L + ++ LV I+++ + V LK ALN+F + + R+ ++ Sbjct: 215 RLFNHSSPISAYINLQLVIILNINGLKKVKLKTALNNF-----------INSFLDRLADH 263 Query: 242 GQLRFRVSLGNY--FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 G+ R + +G + +SY+ AK +GK +S CY ++++ + + Sbjct: 264 GKDRSSIGIGIGSGVPSITDLYKSYQEAKVAWELGKVFDHKSVCY-FEEMGFLKFIFTQP 322 Query: 300 GDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 R L L D N L +L + + Q SKAL++H NTL R+ + Sbjct: 323 ARELEEFSQRVLGPLLEYDQAENTGLLDSLRVFIEYKCQIAECSKALYVHENTLRNRIKK 382 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 I ++TG DL D + +Y+ALQ+ Sbjct: 383 IEQVTGFDLRRVDHMVNVYIALQV 406 >UniRef50_UPI0001C4248F putative transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4248F Length = 410 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 148/405 (36%), Gaps = 42/405 (10%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGS------GDRERIGEL--------------HEGA 51 ++ V + + + D+ ++ D RI + EG Sbjct: 17 EEFVDTISERLQCPVTIEDSNHHLLAYSSHDDGTDAARISTIIGRRVPEKVINRFWKEGV 76 Query: 52 LLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT 111 + L+Q I + G+ + + +R E++G I + L Sbjct: 77 IPTLNQSDEPLIIPQIND--IGLGNRVAVSIRKNNEVLGYIWVLEVGRKLTDEDLADLKF 134 Query: 112 AEMMLEQSRLMHLLAQDSRLRE--ELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAI 168 A + L + + + + EL+ LI + + + ++G++ +P V + Sbjct: 135 AASKAKNQLLQLNMQKKKKEKNHQELLWQLITGDARDHKHIADQLSKIGVNPTKPLAVIL 194 Query: 169 VEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL--KPALNSFGRWDAED 226 + ++ D +L + TT + L+ + ++V L PA N F + E Sbjct: 195 F---NFEVMSDDLYKKLVYVAK--TTQKVTILIQTLDENQVVFLVSSPASNDFVKDTKEF 249 Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYF 285 Q+ R +G + G + I RSY A + + + E F Sbjct: 250 VETFKAQVRER---FGIMEVTAGCGYAYDNYEWIKRSYDEATKVITLKQTFTKELQSAAF 306 Query: 286 YQDLMLPVLLDSLRGDWQANEL-----ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLAT 340 Y +L + +D +R + E+ R L + +++ L TL + Sbjct: 307 YHELGVFRYIDLIRQTIKEQEMTVNPAIRKLEKYD-LEHRTNLLETLGIILDKDGNMNEA 365 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 +K L H NTL YRL RI E+ + L + ++ LY+ +++ +R Sbjct: 366 AKELHCHVNTLNYRLKRIQEIANIQLKDPVQKIGLYLDMKVYLKR 410 >UniRef50_UPI0001C3208F transcriptional regulator, CdaR n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3208F Length = 442 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 123/339 (36%), Gaps = 11/339 (3%) Query: 51 ALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENL--RKYGELV 108 A V+S R V + G+ + +P+R ++G + LT + L + L Sbjct: 92 AHDVVSARRAVRVRPNAEL---GMHARVCVPIRSGEHLLGYLWLTDREQTLTDAELARLD 148 Query: 109 CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP--ALTEWAQRLGIDLNQPRVV 166 + E + R + L D ELV +++ + A + ++ + P VV Sbjct: 149 EIADEAGIVLHRELLLRDLDRSRERELVRDILSEDRGVRRHAAQQLVAFEIVERDGPTVV 208 Query: 167 AIVEVDSGQLGVDSAMAELQQLQNAL--TTPERNNLVAIVSLTEMVVLKPALNSFGRWDA 224 + D A L N + ++ L + ++V+ S R Sbjct: 209 LVASTPGAGATGDELRAPLDAAANRVRRHLAQKRALHLLRPDHVLLVVSCNEPSVRRRGV 268 Query: 225 EDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRC 283 ++ + + + RV++G SY A V Sbjct: 269 VALAEQFRDELATVLDRSHGPVRVAIGGRVDALDGARESYEQALRAATVASHVESRFGAV 328 Query: 284 YFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 + +L + LL L L P L L L TL + AT+ Sbjct: 329 VSWDELGIYRLLAELPVGELGMRLVHPGLRTLLEKPQTHFLVHTLECYLDQAGDAQATAA 388 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 LF+HR TL +RL RI E+ G++L + ++RL L++ L+L Sbjct: 389 TLFVHRTTLYHRLRRIEEVGGINLRDGEERLELHLGLKL 427 >UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliphilus RepID=A8ML41_ALKOO Length = 551 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 134/314 (42%), Gaps = 14/314 (4%) Query: 80 LPLRLEGEIVGVI--GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVM 137 +P+ L+ I G I P L + + L+ + + + ++R R E + Sbjct: 236 MPIILKDSIYGHIFSWAANTPLGGFDLSVLENASTIISLDILKQLSVRDVENRYRWEFLE 295 Query: 138 NLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS-----AMAELQQLQNA 191 +L+ E E A +D+N V+ ++ ++ + + + L+ Sbjct: 296 DLLSMEERRKEKAEEKAHLFQLDVNDHFVLILIHIEEQEKAIRKDFVHGQTSLYSSLEGL 355 Query: 192 LTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLG 251 + + +A + + V+L + + G + K +E+ + + ++ +R+ +G Sbjct: 356 IESHNLKGFIASKTDSLYVLLSFSQKNKGNVALKAFSKDLEEFF--IYHFKEVNYRLGVG 413 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR-GDWQANELARP 310 + G + +SY + + VG + E + F++DL + +L + + Sbjct: 414 REYKGLRQVHKSYEDSVKAIQVG-TLLKERKIIFFEDLGVYKILCQDHLTEELERFYNKT 472 Query: 311 LARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 + L D + L +TL +F ++ S+ALF H NT YR+ RI ++TGL++ Sbjct: 473 IEPLVKYDEKKSTELIKTLEYYFEYHGNLKKISEALFTHYNTTLYRIERIKQITGLNIEC 532 Query: 369 FDDRLLLYVALQLD 382 +DRL L + L++ Sbjct: 533 SNDRLNLEIGLKIK 546 >UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=Corynebacterineae RepID=A1T4Q7_MYCVP Length = 554 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 126/320 (39%), Gaps = 14/320 (4%) Query: 73 GVRQGINLPLRLEGEIVGVIGL------TGEPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 GV I+ +RL G + + G + R TA + E R + Sbjct: 223 GVWTVISTAIRLGKAFEGWVLVVVPSAEPGGHDLARHIVVTEQATAIIGSEMLRQHSVDE 282 Query: 127 QDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVE--VDSGQLGVDSAMA 183 + R R + V L+ ++ + A ID++ V + V G ++M Sbjct: 283 AEERARGDFVQALVHGHFSSEHDMRARADYHEIDIDSVFGVFVAPGAVPRGVDNPAASMV 342 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L + + V +VV++ + ++ + E + ++ Sbjct: 343 RLARYAANVAPDPAVRSYVTVLGDVLVVVRSLRGADDTAMRKEMTRYAEAMADELQNRRG 402 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 V+ G +A SYR A+ + + ++ + YQDL +L + Q Sbjct: 403 TPAAVAYSRPARGAQEVAGSYREARIALGIARRL-GHTGAVSYQDLRSFTVLADVADTDQ 461 Query: 304 ANEL-ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L A L L++ L L + H AT++AL +HRNT+ +L+R+S T Sbjct: 462 SRALVADVLGPLRSA---PDLLDFLIGYLAHGGNVNATARALNVHRNTMLTKLDRVSRAT 518 Query: 363 GLDLGNFDDRLLLYVALQLD 382 GLD+ D++ +++A++LD Sbjct: 519 GLDIRLPDNQFTVWLAIRLD 538 >UniRef50_D2S8H6 Transcriptional regulator, CdaR n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8H6_9ACTO Length = 405 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 108/270 (40%), Gaps = 14/270 (5%) Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG 174 +E RL ++ ++ R E V +L+ L E A+ G+ LN VV + E G Sbjct: 129 YVEAQRL--VVRREEEFRLEFVDDLLAGLAPVGLLIERAEFFGLQLNGAHVVVVAE---G 183 Query: 175 QLGVDSAMAELQQLQNALTTP--ERNNLVAIVSLTEMVVLKPALNSFGRWD-AEDHRKRV 231 Q +DS ++AL +R L A + + VL ++ G D V Sbjct: 184 QRPIDSGSGVRGVAEDALRARFGDRGLLAAAKNGRLVCVLSCPRDADGCADLGRQVAGIV 243 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 L++R G +R G TGP + RSY+ A + + + DL++ Sbjct: 244 GPLVSRTARGG--PWRAGAGRPHTGPRGVQRSYQEAVEALETASRLSLRQQVVQAADLLV 301 Query: 292 PVLL--DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRN 349 +L D + + PL L TL A+F T++ L + Sbjct: 302 YRVLARDETALSDLVHTVLEPLTG--ARGGAAPLVETLEAYFSAGRNAAETARRLHLSVR 359 Query: 350 TLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 + YRL R+ ELTG D G D L L VA+ Sbjct: 360 AVTYRLQRVRELTGYDAGEPDHHLPLLVAV 389 >UniRef50_A3TQC7 Transcriptional regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQC7_9MICO Length = 429 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 76/348 (21%), Positives = 129/348 (37%), Gaps = 19/348 (5%) Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPLRL----EGEIVGVIGLTGEPENLRKYGELVCMT 111 GR++ ++ V GV + +R+ + + G L Sbjct: 81 RTGRLIVEEEPVGVRSPGVAKSERTMVRIVAGTSDHGLLAVFTPGRVLTTTDVHGLERAA 140 Query: 112 AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVE 170 A L ++ + A + + R E + + + P A LG +L++ VV + E Sbjct: 141 AVAALAITKEQAVSAVEGKYRAEFLRDTLVGRGGAPEEAIAHAASLGWNLDRRMVVVVAE 200 Query: 171 VDSGQLGVDSAMAELQQLQ--------NALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 D EL+ LQ A+ T E VA S E+V L PA S Sbjct: 201 TDEDDAQTSRDGDELRSLQERFVRAWVQAVRTREPKAPVAGFS-QEVVALLPAPCSGEGE 259 Query: 223 DAEDHRKR--VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 R + +++ G+ F + I R+Y A + VG+Q E Sbjct: 260 QQTVMRSIGEIVKIVRGDGGGGRRTFSTGVSRPVDSVDDIPRAYAEALRAVAVGRQMQGE 319 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARL--KTMDNNGLLRRTLAAWFRHNVQP 337 S + L + LL + + + L L + LR+TL N+ Sbjct: 320 SAVMHFDGLGIYRLLSLIPDNADLRAFVDEALGELATDAQPSYADLRQTLQVLLDTNLNV 379 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 T++ LF H NTL YR+ ++ ++ G + RL L +AL++ + R Sbjct: 380 AETARLLFFHYNTLRYRITKLEQMLGPFTSDPQLRLTLSLALRIRQMR 427 >UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B580EB Length = 506 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 21/294 (7%) Query: 90 GVIGLTGEPENL--RKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP 147 + + G+P + + + A + LE+SR+ ++R E L+ ++ + Sbjct: 219 WFLVVDGDPAKWPSARRELALELAALVGLERSRMDEARRIENRAAEPLLRLVLSDDAAPG 278 Query: 148 ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLT 207 LT G +P EV G G+ + ++ L+ + LVA V Sbjct: 279 ELTSRLAAAGFAPQEPVTTLSAEVRGGGPGLAQVL-----VEELLSATGQPVLVATVEG- 332 Query: 208 EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 +FG + + D E + T G R + L + + A Sbjct: 333 ---------ETFGLFASRDTEALREAVHTIEPALGSARLTLGLSR-AADAAGLRAGVQEA 382 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLL-DSLRGDWQANELARPLARLKTMD--NNGLLR 324 + + + ++ +LL ++ D + + L + D + L Sbjct: 383 RHARTLAALTPGRATVLSGDEVASHLLLLAAVPEDLRRTFGEKVLGPVLAYDAAHGSELI 442 Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 TL A+ H+ TS L +H NTL YR+ RI ELTG D F DR+ LY+A Sbjct: 443 TTLKAFLEHSGSWTQTSATLHLHVNTLRYRITRIGELTGRDPSRFADRVDLYLA 496 >UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID=Q9KEU2_BACHD Length = 557 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 135/401 (33%), Gaps = 27/401 (6%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG---DRERIGE----LHEGALLVLS 56 L K I+ + I++ + +++ R I+ + D++ E +HE Sbjct: 150 MILSGKGFSQIIEKLAAILEAPVILLNERLDIMAATHKMDKDGFFEVYWFIHEI-NHAED 208 Query: 57 QGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGE---PENLRKYGELVCMTAE 113 + R P+ + G + + G + L Sbjct: 209 TQTYQQCTLPQTNTTNPYRTFFLYPIHSANQQKGFLVVLGNLSPDAKGLQILALEQAANV 268 Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVD 172 + E +++ + +L+ + L+++ + + +D + V + D Sbjct: 269 ISFELMKMLAIEQHARQLKNDFFCELVESLITREEEILNRGKAYQLDKSLQYVCLASKFD 328 Query: 173 SG------------QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG 220 + + ++ +L N+ ++ + V+L + + Sbjct: 329 EMSSFQTEVQPLYMEKELRQQREQMFELLNSYLKKHFDHSILFTKGDLFVILI-GFSYYN 387 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 + + + + + F + NY IA +++ A + G + + Sbjct: 388 DAVEKTFIDAIRDIQQELNQMLDFSFSFGVSNYTERVTDIATAFQEAVDALRSGYRENKK 447 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPL 338 Y+ + L S+ L L L TL ++ H+ Q Sbjct: 448 RFIKTYRIKEMTELFKSIPQQKLKEFYQSSLKDLAFPETKEKQDLLETLDSFLNHHCQIS 507 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 T+K++FIHRNT+ YR+ + E+ G+DL + L L +AL Sbjct: 508 ETAKSMFIHRNTVIYRIKKCEEILGIDLKGGHETLQLRMAL 548 >UniRef50_A6W993 Transcriptional regulator, CdaR n=4 Tax=Actinomycetales RepID=A6W993_KINRD Length = 434 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 22/300 (7%) Query: 93 GLTGEPENLRKYGELV------CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT 146 G G+PE + GE+V + A Q L+ ++ R E V +L+ + Sbjct: 134 GAAGDPEGVVTAGEVVLRASDDAVAALTEGYQLARRQLVRREESDRREFVDDLLAGTADV 193 Query: 147 PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSL 206 L A R G+DL P V +V + + +A +++ + + + LVA Sbjct: 194 TGLLRRAPRFGLDLTGPHAVCVVRAGAPFRDGSAQVATVERRLHG-GVADADPLVATKDG 252 Query: 207 TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRT 266 +VV D + V +L + + +R +G G + S+ Sbjct: 253 ALVVVFAAP-------DRAAVDEVVLRLRDALGSPHRTGWRAGVGRPAAGGSGVVASFEQ 305 Query: 267 AKTTMVVGKQRM----PESRCYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMDNNG 321 A+ + +G + DL++ +L LR A +L LA L+ + Sbjct: 306 ARRALDLGARLGAGDPGRDPVADAADLLVHDVL--LRDHAVARDLVESTLAPLRQVRGGV 363 Query: 322 L-LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 + TL A+ ++ L + + YRL R+ +LTG+D + R L A+ Sbjct: 364 EPVLVTLEAYLDSGGNATEAARRLHLSVRAVTYRLARVRDLTGIDATRPEQRFGLQAAVL 423 >UniRef50_D2B363 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B363_STRRD Length = 501 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 116/293 (39%), Gaps = 15/293 (5%) Query: 93 GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEW 152 L + L + + A + LE++R+ + RL E+L+ A + L Sbjct: 217 ALVCGGDLLGEADLGFELAACVALERTRMEEGRRVERRLAEQLIALACSAGSDPAELNAG 276 Query: 153 AQRLGIDLNQPRVVA--IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMV 210 + GI +P V V G D A Q L+ L R +VA V Sbjct: 277 LRTCGIGPAEPYSVVNATVTRPGAARGPDPARLGGQVLEELL----RPRVVAAAGADGAV 332 Query: 211 VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTT 270 L P + G AE R+ L + +R + + TGP +I A Sbjct: 333 ALVPLSGTAGEL-AETLREGARALAAGLP---GIRVSIGVSAALTGPSAIRGGAEEAGHA 388 Query: 271 MVVGKQRMPESRCYFYQDLMLP-VLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTL 327 + + R ++ +LL ++ D + + AR L L D +N L RTL Sbjct: 389 RRLAEAR--GGGVVTSDEIYTHALLLATVPDDVRRSFAARTLDPLFDYDRRHNSDLVRTL 446 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 + A ++ L +H NT+ YR+ R+ ELTG DL DR+ L++AL+ Sbjct: 447 GTFLDCVGSWNACAERLHVHVNTVRYRIRRVEELTGRDLATMADRVDLFLALR 499 >UniRef50_UPI0001C423A1 putative transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C423A1 Length = 618 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 67/387 (17%), Positives = 139/387 (35%), Gaps = 21/387 (5%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSG-----DRERIGELHEGALLVLSQGRVVDIDDAV 67 I+ + I + ++ G ++ S L ++ + Sbjct: 225 SIMHYIYQNIGYHAILISELGHVMASTIDSPFTPAETQTLLNSLEEAANETNPISPIKLT 284 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKY-GELVCMTAEMMLEQSRLMHLLA 126 + L G + LP+ +GV+ L + E L A + LE + Sbjct: 285 CKQL-GDVSVVLLPIGSAEGNLGVLALLADGEISEMILAALGHACAVISLEILKNQAAFD 343 Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 + L+ E + L+ + A E A+ L + ++ + + Sbjct: 344 TEQTLKGEFIEELLSGNVD-RAFFERAKHLNLSEKGHFTSFMLRFREFDVTNQYDNHLQR 402 Query: 187 QLQNALTTPERNNL---VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 Q+ + +L VA+ +++V + R E ++ +L++ +K+ Q Sbjct: 403 QMVVLIQKYIDEHLHSGVAVAKNEQIIVAISFEHPSARETRE---YQLNELLSYIKQQIQ 459 Query: 244 LR-----FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 L+ + +G +T + +S+ A + + + Y DL + LL Sbjct: 460 LKEWKTDIQCGIGRSYTHLTQLKKSFHEASKCIQFLRSYDLQIDELRYHDLGVQRLLLQN 519 Query: 299 RGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + L L + + L TL + HN T++A+ IH NTL YRL Sbjct: 520 TKEELTDFVEETLGPLLQYERSKKTELLETLILYLDHNQNVKKTAEAMHIHLNTLAYRLK 579 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDE 383 R+ + +D + L +++AL L + Sbjct: 580 RVETILEVDFQDSRQFLDVHMALNLYQ 606 >UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3R2_PAESJ Length = 559 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 72/399 (18%), Positives = 140/399 (35%), Gaps = 38/399 (9%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELH-----EGALLVLSQGRVVDIDDAVA 68 I+ +++ + I +++ + + I R+G A + G + Sbjct: 156 IIDALTKLLSSPILLLNGKLQPIA---ESRLGYTSLMPALAAATDAILDGAAIPSSPTSF 212 Query: 69 RHLH-GVRQGIN---LPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRL 121 L +R N P+ E G + E + L A ++ E ++ Sbjct: 213 CLLDVSLRNRCNVLLYPVHTYRHE--GYLLSFHPVEKMSNLYGLTLEQASNVIGMELTKA 270 Query: 122 MHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG--- 177 + + R + E +LI + ++ GI N V+ D G Sbjct: 271 QAVKERSRRYKNEFFSDLIDGYITSEQEAIHRGKKYGIKANGAWVMLAARRDGAGWGNGQ 330 Query: 178 ------------VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 V ++++ + ++ + + + ++L WD Sbjct: 331 KDSQTERQDERNVSERDEHYERIKRHFSAIGQSFAMFTKNDSFGLLLH---LPASGWDES 387 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 +++ L R+ E L + +G T I SY A + G + Sbjct: 388 IFIQQLAGLSDRLNEEIGLSLSIGIGKPATNALGIRHSYEEAIKALQYGYRLKRTKFVQS 447 Query: 286 YQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKA 343 YQ + L L D ++ + L RTL+A++ Q + TSK Sbjct: 448 YQSKDIGYLFHMLPHDELRQFYEETFYGIRHTEEQERKELLRTLSAFYDTQCQLMETSKL 507 Query: 344 LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 LF+HRNT+ YRL++ +L G+ L + + L L +AL ++ Sbjct: 508 LFVHRNTVVYRLDKCEKLLGVKLKDPIESLRLRIALSVE 546 >UniRef50_A8WDN0 Putative regulatory protein n=1 Tax=Streptomyces eurythermus RepID=A8WDN0_9ACTO Length = 641 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 112/295 (37%), Gaps = 27/295 (9%) Query: 93 GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEW 152 G G PE L +V M E+ D + R++L+ +LI Sbjct: 356 GDPGPPELLFAVANVVSMVLEL-------RRSAPADHQWRDDLLEDLISIHHPAEVAVAR 408 Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL 212 A+RL + L++P +V I D +A A + R + + +V+L Sbjct: 409 ARRLQVRLDRPHIVVIARPDGPVAEHATAWAT--------SWVRRRRGLKMTREDFVVLL 460 Query: 213 KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 P +D ++ R+ ++ V GP SI R Y+ A + Sbjct: 461 LP---------GDDPAAMAHEVSARLSAALEVPVTVGAAGPADGPESIQRFYQEAMRCVE 511 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAW 330 E R +DL LL + D + + + + D +L TL A+ Sbjct: 512 ALIAMGGEGRAACARDLGFLGLLFAEDYDV-TEFVNKIIGPVIEYDTQRFTVLVETLEAY 570 Query: 331 FRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 F+ P ++ L++H NT+ RL RI++L G D L L +AL+L R Sbjct: 571 FQAACSPTRAAELLYVHPNTVSRRLERITQLLGRGWQEPDHALELQLALRLHRTR 625 >UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M3_SPHTD Length = 516 Score = 140 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 116/316 (36%), Gaps = 30/316 (9%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNL 139 LPL G G + L G L + LV A R+ LV +L Sbjct: 219 LPLA-AGAPSGYLSLVGPAGTLNESDRLVLAQTAATCSILLGQGRTAGLGGGRQRLVADL 277 Query: 140 IQAEENTPALTEWAQRL-GIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN 198 + + A ++ GID P +V +++ D A + AL + Sbjct: 278 LLGRLASDAAALARAQMLGIDTTAPVIVGLIDAP------DRPAAARHLVAQALGPAVGD 331 Query: 199 NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPG 258 NL + +V D + L ++ G V+L Sbjct: 332 NLAPVPGGIGFLV-----------QGSDPSRAASALRPTLRREGGNGIAVALSRPVPTIL 380 Query: 259 SIARSYRTAKTTM---VVGKQRMPESRCYFYQDLMLPVLLDSLRGD----WQANELARPL 311 R A+ T+ G +P +R DL L LL L G+ + + PL Sbjct: 381 QAPEGLREARFTLGLQRAGAVTLPVARAGSVDDLGLFSLLYPLWGNPAVAAFRDAVLGPL 440 Query: 312 ARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 ++G L TL + H ++ L IHRNTL YRL RI+ELT DLGN D Sbjct: 441 EDYDRRRHSG-LIETLEVYLSHGGALAEAAEHLGIHRNTLSYRLQRIAELTRRDLGNPRD 499 Query: 372 RLLLYVAL---QLDEE 384 RLLL VAL L EE Sbjct: 500 RLLLQVALLTRHLPEE 515 >UniRef50_A2SP17 Transcriptional regulator, CdaR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SP17_METPP Length = 659 Score = 140 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 131/322 (40%), Gaps = 26/322 (8%) Query: 81 PLRLEGEIVGVIGLTG--EPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 P+ G+ +G + + EP +++ A + + +A+ S L+ + Sbjct: 331 PIVAGGDRIGWVCMRSNSEPAEMQEAASRQGAVASALYCLEQRAASVARAS-ALGALMWD 389 Query: 139 LIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDS-------GQLGVDSAMAELQQLQN 190 L++ E IDL P V ++ +D+ + + +++ Sbjct: 390 LLEGTPPVRQSALERLTEFHIDLRGPHRVVHCTIEGLAETARGEGWNMDTVQRKQRDVRD 449 Query: 191 ALTTP--ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 A+ +A +V + PAL DA ++++ L + ++R Sbjct: 450 AIERALSAAGLKLASSRGDLIVAIIPAL------DAAQVTRQLKSLNEEILARDKVRTFW 503 Query: 249 SLGNYFTGPGSIARSYRTAK-TTMVVGKQRMPESRCYFYQDLMLPVLLDS----LRGDWQ 303 + F P ++ + + AK + VGK +S ++ L + LL + G Sbjct: 504 GVSAPFDSPSQLSNANQEAKCAALAVGKLGTAQSPVVIHEHLGVLTLLLNGGGIAEGHDL 563 Query: 304 ANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + R L + D ++G+L +T+ ++ ++ T+ LF+H T+ YRL + EL Sbjct: 564 RKYVDRMLGPMLKYDSAHHGVLAKTIRSYLDNDCSLKLTALQLFVHEKTVRYRLAQFEEL 623 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG+DL +R+ + +AL + + Sbjct: 624 TGVDLRRHRERMSVDLALLMHD 645 >UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillaceae RepID=YUKF_BACSU Length = 422 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 71/397 (17%), Positives = 151/397 (38%), Gaps = 35/397 (8%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIG------SGDRER-------------IGELHEGAL 52 +D+ ++ I + D +++ D R I +L + Sbjct: 29 EDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTDPARTSTIIGRRVPEKVINKLWKDGT 88 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA 112 + I + G+ + + + +++G I + L L A Sbjct: 89 IPALLKTDQPIRVKQIDEV-GLSNRVAISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMA 147 Query: 113 EMMLEQS--RLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIV 169 ++ +L ++ +E ++ + + +LG+ V I+ Sbjct: 148 AKAVKNKLLKLQIRKTKNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMII 207 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 ++ + +LQ LQ TT + L+A V E+++L D + Sbjct: 208 RINGE--LTEKIEQQLQYLQE--TTQQVYVLLATVDSNELIILTSPKTDHPFQDLKQFAL 263 Query: 230 RVEQLITRMKEYGQL-RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF-YQ 287 ++ ++KE ++ ++ G + ++RSY+ A + + ++ E++ F + Sbjct: 264 STQK---QLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFAEETKHLFSFS 320 Query: 288 DLMLPVLLDSLRGDW-QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 +L + LD L QA L++L+ D + + TL + + SK L Sbjct: 321 ELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNMVETLERFIEADSNVNTASKLL 380 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 IH NTL YRL RIS++ +DL N + + +Y+ ++L Sbjct: 381 NIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYLDIKL 417 >UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QWK2_MYCS2 Length = 517 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 112/284 (39%), Gaps = 13/284 (4%) Query: 103 KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQ 162 + L + LE +R L A +SR EL+ ++ + E + GID + Sbjct: 240 ERDALDQAARYLSLEVTRQQALQAIESRFSSELLEMVLSGAARARDVAERLRAFGIDPSS 299 Query: 163 PRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 V V V G + + E++ N + P +V S +VV Sbjct: 300 ALAVYTVVVGDGAVRPPGSTDEIEDFFNRHSIPA---VVIPGSQDTVVVFGW------HR 350 Query: 223 DAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 D E L+ + + R + +G+ ++ A+ T V ++R E Sbjct: 351 DMTALVGLAEDLVQTLTARFPADRAVIGVGDLAADASALREPLIRARETCHVLRRRTTEP 410 Query: 282 RCYFYQDLMLPVLLDSLRGDWQANELAR-PLARLKTMDNN--GLLRRTLAAWFRHNVQPL 338 + Y D+ +L L A L L D L RTL + ++ Sbjct: 411 KVGTYADIGTHRMLLGLHDRSVLRRFADDILGPLDQHDEQYGTALVRTLRTFLANDGHWA 470 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 T+ L++H NTL R+ RISELTG D+ +DR+ L++AL+ D Sbjct: 471 KTATELYVHVNTLRNRIARISELTGRDVARLEDRVDLFLALEAD 514 >UniRef50_B7JD78 Putative uncharacterized protein n=10 Tax=Bacillus cereus group RepID=B7JD78_BACC0 Length = 740 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 119/319 (37%), Gaps = 16/319 (5%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL--AQDSRLREELVMNL 139 + G +G + + + ++ +L A + + L ++++ + L Sbjct: 412 INGGGNFLGYLAVRRTNGGMDEFDQLTVDLARNICSIQFIKQKLVLDTKEQMKDSFISKL 471 Query: 140 IQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE-- 196 + + E+ + ++A +L + VA++ + + + QQ + +L Sbjct: 472 LTEKIEDRDNILQYANLYQWNLFKKHRVAVLSISLDEKELKKGNLLEQQAKKSLIWDLIK 531 Query: 197 ------RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG-QLRFRVS 249 ++A+ E +++ P + R D + + + + Sbjct: 532 TRLPELGTGILAVSHNDEQLLIVPIEDQKKRADT-FWESMFHSIQKWIHASPIGCQVLLG 590 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELA 308 +G SY+ A + + R + ++DL +L L + Sbjct: 591 IGGVTKQLEDYYISYQQAVQALNILDSRFRKKGYALFEDLGSYAILHHLNHSTAVELFVK 650 Query: 309 RPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 + + L N L TL + ++N + ++ LFIHR++L YRL +I L +DL Sbjct: 651 KQIGPLIAYSEGKNIDLYHTLHVFLQNNGNVKSAAEELFIHRSSLLYRLEKIESLISVDL 710 Query: 367 GNFDDRLLLYVALQLDEER 385 + + R L +AL+L + Sbjct: 711 NDAEVRFNLMMALKLYDMH 729 >UniRef50_Q9KC39 BH1735 protein n=1 Tax=Bacillus halodurans RepID=Q9KC39_BACHD Length = 553 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 74/408 (18%), Positives = 148/408 (36%), Gaps = 32/408 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIG----SGDRERIGELHEGALLVLS 56 + L+ I + D I ++D RG I G S ERI H + Sbjct: 142 LLEMILNGTTFHQIAEHVSHVFDAPILLLDRRGVIRGKSENSDQLERI--WHSSFSHEVI 199 Query: 57 QGRVVDIDDAVARHL--HGVRQGINLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAE 113 + + + + L +R GEI G + + T E+ + + Sbjct: 200 AYQPSVHAPSGSSKWLHDDESAALQLVIRSAGEIQGYLLIGTASEEHTLEQQMALFEHVT 259 Query: 114 MMLEQSRLMHLLAQDSRLR--EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVE 170 + L A+++ R + V +L + + + A+ LG ++ P + Sbjct: 260 TAVALHFLHEHAAKETEWRLQGDFVWSLAKGDVSSWDTALSRAKSLGYQVHLPYLCLTAM 319 Query: 171 VDSGQLGVDSAMAELQQLQNALTTPERN--------------NLVAIVSLTEMVVLKPAL 216 ++ ++ + L R ++A + ++V + Sbjct: 320 PENISQLYQQDREQIGTFDHWLQGVTRCLEEEAYDVAKSLHLQVMATYAKEYLIVFLEVV 379 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 A + + +Q ++ + + L F + +G S+ A+ + VG++ Sbjct: 380 QDRSTETAYTYIQSFQQRMSLL--FPHLFFSWGISKT-SGYKQFHESFEEARKALTVGRK 436 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLAR---LKTMDNNGLLRRTLAAWFRH 333 + Y D + +L SL + + E+ L + ++D L T + R+ Sbjct: 437 QRGPGCQSLYADTRIDRVLFSLIDNQELREMTDSLLHSLLVYSVDRKIDLVNTFQTYHRN 496 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++ L +HR +L YRL +I LTG L N DD LL ++++L Sbjct: 497 KSNVSQTARQLNLHRQSLLYRLRKIESLTGCSLNNPDDVFLLDLSIRL 544 >UniRef50_D1C782 Transcriptional regulator, CdaR n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C782_SPHTD Length = 645 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 116/319 (36%), Gaps = 22/319 (6%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVMN 138 P+ +++G + +T A +L + L + LR + Sbjct: 317 PIVAGRDLLGYVTITLPSLPAPPLALRAVGHAATVLALEIMKERLEHEVELRMQRGFAAE 376 Query: 139 LIQAEENTPALTE-WAQRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAELQQLQNAL-- 192 L+ + L + A+ LG L +P V + ++D +G + A + L+ Sbjct: 377 LLTGRFDDVKLVQDRARYLGYRLQEPYQVLVFDIDRPGEAIVGSERPEAAIDVLRQRFAA 436 Query: 193 ------TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 T+ + LV ++VL G A+ E + R++ Sbjct: 437 LLQTVATSRTPHALVGGRDDHLVMVLMGVDGPPGELAAQTIGAVRELIAARVQGLSVSVG 496 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ--- 303 + SYR A+ +++ ++ R +Y DL + LL + + Sbjct: 497 VG---RVVPQIDQVPTSYREAERALLIARRFGGHDRTVYYDDLGVARLLYQVEDTEELIA 553 Query: 304 -ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 A + P+ R + G+L L A+F + +K L IH NTL YRL R+ L Sbjct: 554 FAQQRLGPVLRYDER-HGGILLTALEAYFANGQSVPYAAKHLRIHPNTLRYRLRRVESLL 612 Query: 363 GLDLGNFDDRLLLYVALQL 381 + L D L L +A + Sbjct: 613 NVSLNQVDVLLDLRLACLI 631 >UniRef50_C0D4S9 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4S9_9CLOT Length = 176 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 3/175 (1%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +D K+AQ IV + N+N +D G I S D RIG HE G+ ++++ Sbjct: 4 QIDRKLAQQIVDTVKDVCGQNVNFIDGSGLIYASTDAGRIGSYHEIGRQAAVAGKAIEVE 63 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 G ++G+NLP+ G +V VIG++G P +R Y L +++ + + Sbjct: 64 ADD--RFSGTQKGVNLPVYHNGSMVAVIGISGPPGEVRTYARLAERITGLLIREREIGAF 121 Query: 125 LAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 R ++ LI+ E L E GI + VA++ V Sbjct: 122 SRTQEERRSYVINGLIRREPMAEEYLKEALAEWGIARGTGKRVAVIRVYGRPYAA 176 >UniRef50_Q896S3 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q896S3_CLOTE Length = 396 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 115/275 (41%), Gaps = 9/275 (3%) Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAI-VEVD 172 +M + DS +++ + + E+ + + LGID+N+ VA ++ D Sbjct: 118 IMNVMHLIFEEGDADSIIQKYIKDIIFDIYEDEKLMVQRGNLLGIDVNRDYFVAFTLKFD 177 Query: 173 SGQLGVDSAMAELQQLQNALTTPERNN----LVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 + ++ M L+++ ++ NN L + V + + + Sbjct: 178 ENEEINNNHMNCLKRVAKEISKYVTNNKNFELSPYIDADRSVSIIFQSSLKSNIEKMLPY 237 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 L+ + +G+ T I SY + + G +++ ++Y+D Sbjct: 238 IEKGALLQVEHYLKGKNLFIGVGSIETNIEGIKNSYFNSIKAIKSGNIFKEKNKVFYYKD 297 Query: 289 LMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 + + +L + G+ + L +K D L TL ++ N T+ LFIH+ Sbjct: 298 MEIYCILKEVIGECTEPLMNLVLKNVKDKD----LLDTLIKYYECNANLDETAMELFIHK 353 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 NT++YRL +I E+TGLD+ +D LY+A+ ++ Sbjct: 354 NTVKYRLQKIKEITGLDVKVHEDSFKLYLAVLANK 388 >UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SNX8_METPP Length = 645 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 153/381 (40%), Gaps = 20/381 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 IV+ T + T++ ++D G ++ +R H V + + A G Sbjct: 259 IVSTTSTTLKTDVAIIDRDGTLLAWSGSDR---AHGLVAAVAAAVVAQGVATAGLSMTQG 315 Query: 74 VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLR- 132 P+ +EGE V I T E + + EL ++ RL A +R Sbjct: 316 GLSWRVQPIFVEGEAVAWILGTLEDAHRSELIELTLTQVAVIAALQRLEQRSASRARSES 375 Query: 133 -EELVMNLIQAEENTPALTEWAQRL-GIDLNQPRVVAIVEVDSGQLGVDSAMAEL--QQL 188 + + +L++A+E A +DL P + + E+ + G + + Q++ Sbjct: 376 IDATLWDLLRADETARAAAIDRAADLKLDLEGPMRLYLCELGATVPGSAQSSGSILRQKI 435 Query: 189 QNALTTP--ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF 246 A+ T E+ +A+ ++ V+ DAE K + + I+ G + Sbjct: 436 TRAVETVRGEKARAIALQGISIAVLCS----DQALDDAERFAKGLAEAISD--GLGGRQV 489 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANE 306 V + P ++A +YR A+ + V +Q + Y + +L SLR D Sbjct: 490 VVGGSSRCHVPRALAIAYREAQIALDVSRQMGKTASVV-YDRAGVVGMLLSLRHDVGMRR 548 Query: 307 LARPLARLKTM---DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L +TL +F N A S+ L +HR T+ +RL RIS+LTG Sbjct: 549 FLELNLGELLNEEPKQRDLFLQTLRVYFDVNCSHEAASQRLGVHRKTVAHRLGRISDLTG 608 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 LDL DDRL+ ++L + + Sbjct: 609 LDLSTHDDRLVADLSLYVFQM 629 >UniRef50_O32138 Purine catabolism regulatory protein n=3 Tax=Bacillus RepID=PUCR_BACSU Length = 531 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 105/314 (33%), Gaps = 12/314 (3%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD--SRLREELVM 137 LP+ + G + + + K L A ++ L + R R E Sbjct: 217 LPIYNHEKNCGYLLIPDMVQAGDKGLILTIEQAANVISFELLKENALKQFSRRARNEFFN 276 Query: 138 NLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE 196 N I+ + + A+ + +Q + ++D + +L + E Sbjct: 277 NFIERTFSSDDEIKNRAKEFKLRWDQKYMCIAGKLDRNDESISFTENQLAS-DSVFEFLE 335 Query: 197 RNNLVAIVSLTEM------VVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 ++L A +S+ A +EQ T++ + + Sbjct: 336 GELSAFPFPPHFFMKGNVGIILIEATDSWSEMHA-SVISFLEQFQTQVSAQFKRTVSFGI 394 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP 310 N + ++ A + G + Y +P LL L + Sbjct: 395 SNICQKLIDVPDAFTEASDALQSGHLSRSTAFIQVYHAKDVPELLRLLPVEDLKKFYNST 454 Query: 311 LARLKTMDNNGL-LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 L L L TL+ + + Q T+K L++HRNT+ YRL + EL G L + Sbjct: 455 LQSLAEKQQEDQSLLHTLSVYLETHCQISETAKRLYVHRNTVIYRLEKCEELLGKSLKDP 514 Query: 370 DDRLLLYVALQLDE 383 + + L +AL++ Sbjct: 515 ETTMRLRLALRMQR 528 >UniRef50_C9M8Q2 Putative transcriptional regulator, CdaR n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8Q2_9BACT Length = 535 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 122/318 (38%), Gaps = 15/318 (4%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAE----MMLEQSRLMHLLAQDSRLREELVM 137 ++ + G + L P ++ +L +ML R + + R R E V Sbjct: 209 IQSGDNVYGYLFLNSAPGEQKQDRQLQTAAQHAATALMLLVQRDIASREVEYRYRNEFVQ 268 Query: 138 NL-IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD------SAMAELQQLQN 190 +L + ++ LT A R G DL+ +V++D + D + + E +Q+ + Sbjct: 269 DLILNNVKHERDLTRRAHRFGWDLSGWVRAIVVQIDPEKRRPDGSETPYAQLEERRQMVS 328 Query: 191 ALTTPERNNLVAIVSLTEMV-VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 ++ + + + + M + S R+ + ++ ++ + + ++ Sbjct: 329 SIAVEGIRRVYSKMPYSTMSDAIVFLDFSPEPPSRHIGREDLLKIQEQIAKRTEATVTIA 388 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL-RGDWQANELA 308 G + SY AK + + + + + +L + + + N Sbjct: 389 TGRFKESAFLAHESYTEAKKALEIVRSLKCGNHIIDWDELGIFSFIAPICNTPDAKNFCE 448 Query: 309 RPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L L D +N L TL A + N Q + L IH NTL YR ++I EL DL Sbjct: 449 EQLQPLIQHDKEHNSDLLITLEAVIKSNWQLKQAADDLSIHYNTLRYRYDKIRELLRADL 508 Query: 367 GNFDDRLLLYVALQLDEE 384 + D RL L +A ++ Sbjct: 509 NDSDKRLSLGIAFKMYRM 526 >UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR07_BACS4 Length = 559 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 71/323 (21%), Positives = 122/323 (37%), Gaps = 23/323 (7%) Query: 80 LPLRLEGEIVGVIGLTGEP-ENLRKYGELVCMTAEMMLEQSRLMHLLAQ--DSRLREELV 136 LP+ G + E L + V + + + + RL++ + Sbjct: 232 LPIVNNHHNQGSLLFHPVDREKLTTFVMNVLDHSLTACALYFVKENAVELTEVRLKDNFI 291 Query: 137 MNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDS--------------GQLGVDSA 181 + L Q E T L AQ LG DL +P + + E+ G + S Sbjct: 292 LELAQKYSEVTTQLISKAQLLGYDLARPYLCLVGEMTHNDRKKTLKVQGESLGSSSLQSR 351 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 LQ+ R + E+++ A N A +E+ + + + Sbjct: 352 NYYLQKEITRAGKNLRRRTMTTFDEDEVIIFLEADNQPYMETANQFLDNIEERLYELLSH 411 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR-G 300 + F + + G + SY AKT + +GKQ+ F+ D + LL ++ Sbjct: 412 --ITFSWGIATHKDGHYAFHNSYEEAKTALKIGKQQKGLGERTFFSDTRINRLLMAISQE 469 Query: 301 DWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 D A + L L D L T + ++ T++AL +HR +L +RL I Sbjct: 470 DAIATIVKDTLQPLLDYDEKRQTDLIYTFIIYNKYKGNVSQTARALNLHRQSLLHRLRNI 529 Query: 359 SELTGLDLGNFDDRLLLYVALQL 381 LTGL L + DD LL ++++L Sbjct: 530 ESLTGLSLVDSDDLFLLELSVRL 552 >UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1H8_CLOB8 Length = 405 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 115/283 (40%), Gaps = 11/283 (3%) Query: 110 MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAI 168 E+ E S + L + + N++ + E + A G +L+ + + Sbjct: 118 KLVEVSREISNAIILSRIEENSLSHFLSNILFGDGELEGDAIQKAAYFGYNLSGGCCICV 177 Query: 169 VEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEM---VVLKPALNSFGRWDAE 225 +++D + + ++ + + R + I+ + ++ K F E Sbjct: 178 IDIDGFERYLKLKNLGDEKSISKIKINFRKVVQDILDKHALKVPIIDKDDAVIFFIRSEE 237 Query: 226 DHRKRVEQLITRMKEYGQLR-----FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 + R+++ + ++ + R V +GN + + +S A+ + K + + Sbjct: 238 NCMNRLDKALKEIQLATKNRMDGMSVSVGIGNSYKDLKMMKQSLNEAELAIDSAKCQGLD 297 Query: 281 SRCYFYQDLMLPVLLDSL-RGDWQANELARPLARLKTMDNNGL-LRRTLAAWFRHNVQPL 338 Y+D+ + LL S+ N + L + DN L L + N Sbjct: 298 DTITRYKDIGIYSLLFSVENRSILQNYFSEVLGPISGADNKDNNLIEILEMYLNENCNIT 357 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++ LF+HRNTL+Y++ +I EL DL NF+D + + +AL + Sbjct: 358 VTAEKLFLHRNTLKYKIKKIEELLNCDLRNFNDCIKVKIALDI 400 >UniRef50_B8FTD6 Transcriptional regulator, CdaR n=3 Tax=Desulfitobacterium hafniense RepID=B8FTD6_DESHD Length = 409 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 121/318 (38%), Gaps = 11/318 (3%) Query: 77 GINLPLRLEGEIVGVIGLTGEPENLRK--YGELVCMTAEMMLEQS--RLMHLLAQDSRLR 132 G+ + G ++G + L + + E + E + S + L + ++ + Sbjct: 87 GLGRAIAPAGRVLGYLFLVTDKAEGSDLDFYETLLDNVESLYANSLKNQLELKQKKNKSK 146 Query: 133 EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA--MAELQQL- 188 + +L+ + + + G D P V +++V +L + LQ++ Sbjct: 147 DAFFYDLLYGNLKRNEDIMNRGEVWGWDFRHPHAVLLLKVRDVELFSPDRHLIDALQRIV 206 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE-YGQLRFR 247 + L N V E++ L + + +D + ++ + + R Sbjct: 207 ERGLINRYGKNPAVTVHRNEVIALVHSASRKRSEQKQDIKALAGNILNQTADTELNKRIA 266 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL 307 +G + P + RSY+ AK + +G + F+ D+ L +L Sbjct: 267 FGVGQTYDEPIDLFRSYQEAKVVIDMGGLLGVK--VPFFSDMGLERVLYKHDIQDLKEYR 324 Query: 308 ARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 + L L+ ++ L L + + T++ LFIHRNTL RL++I + L Sbjct: 325 DQVLGDLRKDESGESLLEILKTFTMNQFDVNKTAQDLFIHRNTLRTRLSKIEAILDRPLD 384 Query: 368 NFDDRLLLYVALQLDEER 385 + RL L L++++ Sbjct: 385 DMSTRLDLTAVLKIEQLH 402 >UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FRM6_DESHD Length = 404 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 11/291 (3%) Query: 100 NLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGI 158 L E + + + M L ++ + +++ N L + + L Sbjct: 106 ELIPSLEKASLAVKTYFNLAHSMEKL--NNVYTNNFIADILLCNINIKELLKQNSFLLNY 163 Query: 159 DLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 DLN V I+ D ++ A L ++ L + + + +V + P Sbjct: 164 DLNNLYYVCIMLTDRILTEIEKQ-ALLAYTRDWLKLNKLDIFCTVWDNKYLVHICPTHYD 222 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRF----RVSLGNYFTGPGSIARSYRTAKTTMVVG 274 D + K+ ITR E + +F +GN + + SY+ A + + Sbjct: 223 VKILDVDSGWKKSLDNITRYHEDVRKKFNFKATFGIGNKYL-IDKLHLSYQEALYAIHLS 281 Query: 275 KQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFR 332 + ++ DL + L+ S D + + L L D NN +L TL +F Sbjct: 282 ELTGNGNQVRHIYDLGVYSLIFSNSLDHLKSLYKKYLNALILHDKVNNSMLLDTLRCYFD 341 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 N+ T++ LF+H NTL YRL R+ ELT DR LY+AL++ + Sbjct: 342 ANLNINETAERLFLHINTLRYRLKRVEELTNTSFQKAYDRTNLYIALKVYD 392 >UniRef50_D2B3U7 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3U7_STRRD Length = 520 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 74/380 (19%), Positives = 134/380 (35%), Gaps = 36/380 (9%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 +++ A ++D + V+D G+++ + H AL +GR + Sbjct: 169 REVTAEVAGLLDVAVAVLDGAGQVLAAAGPA----EHLAALRGTPEGRHTSV-------- 216 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRK--YGELVCMTAEMMLEQSRLMHLLAQDS 129 P+ G G I G ++ G L L +R + A +S Sbjct: 217 ---------PVVAGGHHHGRIVACGPVGSVSDSDVGILERAATVAALVVTRQEAVNAVES 267 Query: 130 RLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 + R + + +++ + + A+ G DL +P V + E+D + + Sbjct: 268 KYRADFLRDVLTGRAGGSERVASRAKAFGWDLERPVTVLVAELDPEGDERVAQDRLVTCW 327 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 A+ + VA S E+V + A GR + E L F Sbjct: 328 TAAMRRHDPRGAVAGFS-HEVVTIVDAAVDAGRLAKDAAAAFAECL--------PATFST 378 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-EL 307 G ++ +Y A VG+Q + + L + LL + + + + Sbjct: 379 GASRTAAGAEALPEAYGQALKAARVGRQLHGPAAVAHFDQLGVYRLLSLVNDTDELHAFV 438 Query: 308 ARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 L L + LRRTL N+ T++ L H NTL YR+ ++ + G Sbjct: 439 RETLGPLAADADAENADLRRTLQVLLDTNLNVAETARRLHFHYNTLRYRIGKLERMLGNF 498 Query: 366 LGNFDDRLLLYVALQLDEER 385 + RL L +AL + R Sbjct: 499 TEDAHLRLNLTLALHVLRMR 518 >UniRef50_A8SJR4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJR4_9FIRM Length = 514 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 120/313 (38%), Gaps = 14/313 (4%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRLMHLLAQDSRLREELVMNL 139 + + + +G + L L ++ + + A +++ + + ++ + + ++ Sbjct: 192 IFSKNKEIGKLILNIPKIELSEFDKTIIDYALEIALIQIEKEITIVKLKENYLNDFISDI 251 Query: 140 IQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE---LQQLQNALTTP 195 + ++ L A+ ID++ V I ++D+ + + E L++++ + Sbjct: 252 LSGNIQSKEELLIRAKLFDIDIDGYSSVIIFDIDNYKYSIVQKPLENIKLEEIKRKMFEK 311 Query: 196 ERNNL------VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 N V ++ +VL NS + V +L +K F V Sbjct: 312 IIQNFELLKSKVLYYKKSDSLVLITKHNSSDNTLLNELEFLVSKLKKIIKSDFNFTFTVG 371 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 +GN I +SY A + +G+ + Y D+ +L + + Sbjct: 372 MGNIQKDIMDINKSYEEALDCIKIGRLLEENDGIFKYDDIEFFKILSTTINSSKTPSFIN 431 Query: 310 PLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 + ++ D TL +N TSK F+H NT++YR +ISE+ DL Sbjct: 432 DILKILKYDKEKDTTYFETLNRLIENNWSLKQTSKKQFLHYNTIKYRFEKISEIINKDLN 491 Query: 368 NFDDRLLLYVALQ 380 + + R LL + + Sbjct: 492 DNNTRFLLELGYR 504 >UniRef50_D1A7Y9 Transcriptional regulator, CdaR n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A7Y9_THECD Length = 538 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 107/321 (33%), Gaps = 21/321 (6%) Query: 85 EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE 144 G IV G G G L + L ++ + A +S+ R + + +++ Sbjct: 217 HGRIVAY-GAGGGLRASDVVGILERAATVVALLITKQQAVAAVESKYRADFLRDVLAGRA 275 Query: 145 NTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL-------------QQLQN 190 + G DL++P V + E+D D ++L Sbjct: 276 GEDGQVIAHCSGFGWDLDRPMTVLVAELDGRDDAADGTGGRAGRRDRGADERLVQERLAA 335 Query: 191 ALTTPERNNL---VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 A T+ R + E+V + A G R + + F Sbjct: 336 AWTSVVRRHDRHAAVAGFANEVVAVVGAPEEGGAAPDPAVLVREAAAVFSEPHGARHTFS 395 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-E 306 + T P + +Y A + VG+Q + L + LL + + + Sbjct: 396 TGISRTVTSPSRLPEAYEQAVKAVRVGRQMHGAGARVHFDQLGVYRLLSLVPDPAELHAF 455 Query: 307 LARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + L L LRRTL N+ T++ L H NTL YR+ ++ + G Sbjct: 456 VRETLGELACDDEPEAVDLRRTLQVLLETNLNVAETARRLHFHYNTLRYRIGKLERMLGP 515 Query: 365 DLGNFDDRLLLYVALQLDEER 385 + RL L +AL + + Sbjct: 516 FTEDAHLRLNLTLALHVLRMK 536 >UniRef50_C3JW82 Transcriptional regulator n=3 Tax=Rhodococcus RepID=C3JW82_RHOER Length = 565 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 117/310 (37%), Gaps = 15/310 (4%) Query: 85 EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE 144 G +V G + + L L ++ + + A +S+ R + + + + E Sbjct: 259 HGRMVAYAGTHELGAVVVQ--ALERAATVAALAVTKQLAVAAVESKFRGDFLRDALIGEA 316 Query: 145 NTP-ALTEWAQRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAELQQLQNALTTPERNNL 200 +P ++ +LG D+ +P V + E+D +S + +L + R + Sbjct: 317 GSPAEVSAHFTQLGWDVTRPLAVVVAELDVDHPESQHANSTRTDQDRLSDGWQQVVRTHE 376 Query: 201 VAIVS---LTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGP 257 S E+V L P D E ++V + G+ F + Sbjct: 377 RTAPSVGFRHEVVTLFPTSTDRAVRDIEGLVRKVAG----DRTSGRRSFSTGVSRVIYSL 432 Query: 258 GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTM 317 + +Y A T +VVG++ + + +L + LL + + + + Sbjct: 433 ADLPAAYDQACTAVVVGRRINGPGQIAHFDELGVHRLLSLQTDKSELRSFTDDVLKSLSA 492 Query: 318 DNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLL 375 DN LR TL N S+AL +H NTL YR+ ++ + G + RL + Sbjct: 493 DNAEAADLRLTLQTLLDCNCNVAEASRALHMHYNTLRYRIGKLESVVGSFTDDPVLRLNV 552 Query: 376 YVALQLDEER 385 +ALQ+ + Sbjct: 553 SLALQVMKMH 562 >UniRef50_Q0B7J6 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q0B7J6_BURCM Length = 602 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 140/385 (36%), Gaps = 25/385 (6%) Query: 18 TMRIIDTNINVMDA-RGRIIGSGDRERIGELHEGALLVL---SQGRVVDIDDAVARHLHG 73 ++D+ + V+D G ++ S + L A L GR + A H Sbjct: 207 LADLLDSPVLVIDFYGGELLASRPP--VEGLDAAAWRALLDGETGRQMRETVREAIARHA 264 Query: 74 VRQ-------GINL-----PLRLEGEIVGVIGLTGEPENLR-KYGELVCMTAEMMLEQSR 120 R+ G+ L PL ++G+ VG + GE + + M ++ R Sbjct: 265 SRRVGFVLPGGVPLTADVEPLAVDGDTVGALLSFGERAEGDLQALAIESAKFAMSVQLMR 324 Query: 121 LMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 + ++R EL +++ + + E ++RLGI L P + +V+ + Sbjct: 325 SVIRFRAETRTLTELFFEIVERRWRDEQDIVERSRRLGIALGTPMRLLVVDYPHREGPAL 384 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 AE + + + + +V L P + + QL + Sbjct: 385 DRSAECHRTVGLIAAQHKLISHPVTVGGGLVCLLPEDDQRPLASVNAFAR---QLCGALT 441 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + + + G +A + + V + LP+L+ + Sbjct: 442 PLFGGEPTLVVSDCVAGLTELANEWDRCWRMIRVARSFGKTGALSVPDLGPLPMLMGAAD 501 Query: 300 GDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + + D + TLA + RH + A + A+ +H TL YRL+R Sbjct: 502 SPDVRAFITGTIGPIVEYDASHRASYLDTLAVYIRHGCRSQACADAMGLHVTTLRYRLSR 561 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 IS+L G+D+ + R + +ALQL Sbjct: 562 ISDLFGIDVETPERRFAVELALQLH 586 >UniRef50_Q9KBD4 BH1994 protein n=2 Tax=Bacillus halodurans RepID=Q9KBD4_BACHD Length = 735 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 128/320 (40%), Gaps = 20/320 (6%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL--REELVMN 138 P+ G ++G + + E + + +L A + L D+R ++ + Sbjct: 414 PINGGGHLLGYLIIQFTHEEIDDFYQLSIDLALNIYAIQFNKQKLVLDAREQVKDSFLNK 473 Query: 139 LIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ-------LGVDSAMAEL--QQL 188 L+ + E+ ++ ++A DL V+++ ++ Q L AM L + + Sbjct: 474 LLVEKIEDQKSIIQYANLFHWDLFHSHRVSVLSINLAQKESNKVNLLEQQAMKSLLWENI 533 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 + L+ + + L++ E +++ PA G+ + + +V Q I E +R R+ Sbjct: 534 KTRLSIYDEDILLSSKG-DEYILIVPASKERGK--PKVYWAKVYQNIQSWVEQEGIRARL 590 Query: 249 --SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN- 305 +G Y+ A V R + + +L LL L+ + Sbjct: 591 LLGIGGKTETIHDYFSCYQQAVQVHNVVSHRFRDIGFALFDELGSYTLLHHLKNTPATSL 650 Query: 306 ELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + L L + L TL + N TS L+IHR++L YRL +I L Sbjct: 651 FIDKHLQPLLQYSQGRSTDLFYTLRVYLNQNGSIKETSDELYIHRSSLLYRLEKIETLLD 710 Query: 364 LDLGNFDDRLLLYVALQLDE 383 +DL + + R L +A +L + Sbjct: 711 VDLNDSEHRFNLMMAFKLYD 730 >UniRef50_A8FAN6 Putative uncharacterized protein n=2 Tax=Bacillus pumilus RepID=A8FAN6_BACP2 Length = 552 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 16/311 (5%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVMN 138 P+ G+I G I + + + A + L QD+ + + L+ + Sbjct: 232 PVIAMGDIFGFIVSLKKKDTWHHLDAIAIEHAGAVYAIEWLKQKAIQDTENQMQGHLLDD 291 Query: 139 LIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT-PE 196 ++Q + + + E A +L D++ +VV + +D M +Q+L LT+ E Sbjct: 292 ILQQQYTEESYVVEQATKLQYDMSDEQVVIYFQFQHQHTQLDHQM--MQRLSQLLTSIFE 349 Query: 197 RNNLVAIVS--LTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYF 254 R ++ ++ L + VL PA + +AE +R E T + + +G + Sbjct: 350 RRHISFLLKTRLDSIFVLTPAGKKAFQ-EAEWYRAAEECRSTWSYFFPVHPIVIGIGRAY 408 Query: 255 TGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-----DWQANELAR 309 A+S + A+ + + YQ L L +L + EL Sbjct: 409 DQISLFAKSAKEAQYAARLLPLLKTDESIIHYQKLGLYGMLLEMNEAGMNLHDFYVELLS 468 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 PL L T L TL + HN ++ LFIHR+TL YRL +I TG L + Sbjct: 469 PL--LYTKKQGADLIHTLEVYLAHNENIQKSAGELFIHRHTLSYRLKQIETRTGCSLKST 526 Query: 370 DDRLLLYVALQ 380 DDR+ L +++ Sbjct: 527 DDRMKLQLSIM 537 >UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus RepID=YCGP_BACSU Length = 411 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 137/321 (42%), Gaps = 12/321 (3%) Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ--SRLMHLLAQDSR 130 G+ Q + + + +GE++G I + +NL + + + L + Sbjct: 95 GLNQRVVVSAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQEKEE 154 Query: 131 LREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 E+L+ I + + L A+R+ L V I+ +G ++ + ++ Sbjct: 155 KAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGDG--EAVEDLKENIR 212 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK-EYGQLRFRV 248 + L R+ + ++++ +V+ A S + + + +L+T + + Sbjct: 213 SYLNL--RDKVSHVLTIESNIVIVVASFSQKSSVSSAASEFINKLLTHFHFQKIPTPIYI 270 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC-YFYQDLMLPVLLDSLRGDWQANEL 307 +GN + + +SY A + + + Y Y L + L+S+ + E Sbjct: 271 GIGNEYNHLLKLGKSYTEALEVIKAAEITGNQENIPYEYAKLGIYRYLESIEQKNEFLEY 330 Query: 308 AR---PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L + K +++ L +TL + +N + ++ LFIH+NTL YR+ +I+E+T + Sbjct: 331 ENKDLALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSI 390 Query: 365 DLGNFDDRLLLYVALQLDEER 385 DL +F R LY+ L L +++ Sbjct: 391 DLSDFRTRCQLYLDLMLMKKK 411 >UniRef50_A8RX21 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RX21_9CLOT Length = 563 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 147/393 (37%), Gaps = 30/393 (7%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 +I+ ++I + V + + + D + V D + Sbjct: 171 EILDVLSKLIRNPVAVYNQNLTCLAATD--------QAPREFAVSRDAVPFDPGTYSNYT 222 Query: 73 GVRQGINLP-------LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 +RQ +P + +I V+ +P + E SR + Sbjct: 223 YMRQKGEVPQCLIQVKMSFREKIYLVVTELNQPFGTMDCIAAESAITALRFEFSRQYAVT 282 Query: 126 AQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + + +++ N++ + + L + LG+D+N V + + + + A+ Sbjct: 283 ELEKKFQNDIIHNILNGKIHSMGELQKNTSLLGVDINGSYRVIVFGMTNESMARGDFKAK 342 Query: 185 LQQLQNALTTPERNNLV---AIVSLTEMVVLKPALNSFGRWD-AEDHRKRVEQLITRMKE 240 ++ + + L+ R+ + L ++VV++ + + + +K EQ+ + Sbjct: 343 VKDI-DVLSDLIRSRISKAKIHNDLDKIVVIQEVEREQTQEEYRKSIKKIAEQVQADVAR 401 Query: 241 YGQ-LRFRVSLGNYFTGPGSIARSYRTAKTTM---VVGKQRMPES--RCYFYQDLMLPVL 294 Y + L+ + G G ++ S++ A V + + + + DL + L Sbjct: 402 YNKYLKIKAGAGRVVDGIINLPESFKEANEAFMFVDVAGETPEDGGPQVMLFADLGIFKL 461 Query: 295 LDSLRGDW-QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L L + L +L L TL A+ N+ T++ L++H T Sbjct: 462 LCQLSDPSMLLEYVPEGLQKLYNYKKPQRDDLITTLRAYLDRNLNLSKTAQDLYVHYKTA 521 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 YR+ +I +LTG+D N ++ L + + L + + Sbjct: 522 VYRIEKIEKLTGIDFDNANEVLAVRIGLVVYKM 554 >UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J053_9BACL Length = 415 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 77/398 (19%), Positives = 148/398 (37%), Gaps = 36/398 (9%) Query: 14 IVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHEGAL-- 52 + + ++ + + DA R++ D R IG L + Sbjct: 19 LAEKISDVLGRPVTIEDANHRLVAYSSHEPETDAARLATIVGRRVPDQIIGSLWRDGVMP 78 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGE--PENLRKYGELVCM 110 +L + + L G + +RL +VG I + P + R+ Sbjct: 79 RLLESEAPIRVAPIQEVGLSG---RVATAIRLGSRVVGFIWVLEAERPFSEREMALFAKA 135 Query: 111 TAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALT-EWAQRLGIDLNQPRVVAIV 169 + ++ ++ + L+ + L + AQR+GI L V ++ Sbjct: 136 AQAARTKMAQWQLQRHKEEEAHRDFFWQLLTGHLSNETLIRDKAQRIGITLPPQFHVVVL 195 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 + + ++ L++ L+ R L AI +++ P A Sbjct: 196 QF-AAEVKESWQRQALEKCA-PLSAYSRIVLHAINKNQLILLFAPITADTKDGVASQLGL 253 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQD 288 + L T + ++ G ++ G + SYR A + V ++ E Y D Sbjct: 254 LQQNLRTYFSPHF---LGLASGCLYSEYGRLEDSYREALLLLEVKQRFPKETGDLVIYSD 310 Query: 289 LMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALF 345 L L + + Q + A LARL+ D ++ L TL + H+ ++AL Sbjct: 311 LGYYRYLPRIWEELQRHGRAGSQLARLRAYDQEHHSELVHTLEVFLAHDSNAKTAAEALH 370 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +H NTL YRL RI+E+ +DL + + ++ LY+ L+ + Sbjct: 371 VHANTLNYRLKRIAEIGRIDLTSMEQKVTLYLELKAER 408 >UniRef50_C1B780 Putative CdaR family transcriptional regulator n=3 Tax=Rhodococcus RepID=C1B780_RHOOB Length = 550 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 116/300 (38%), Gaps = 14/300 (4%) Query: 95 TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWA 153 TG+ + + A L +R + + + + + R V +L+ + A Sbjct: 252 TGDLLHSEDLYLVEQAAAVCALVVARELVVSSVEEKHRANFVRDLLLGRGGEHEHVVAHA 311 Query: 154 QRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMV 210 + G DL++P VV ++E D + + + M +++ A T+ VA V Sbjct: 312 KTFGWDLDRPVVVVVIEPDPVGEDEPSMPTRMPLVERQARAFTSA-----VAGRDAGAAV 366 Query: 211 VLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS---LGNYFTGPGSIARSYRTA 267 P D V +L+ ++ G R + I Y A Sbjct: 367 TALPTETVILMGVGTDTMNLVHELVATVRGAGGGGRRAFGVGVSRPTDSVDGIPALYGQA 426 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRR 325 +T + VG+Q + DL + LL + D + A+ R T D +RR Sbjct: 427 RTALKVGRQITGAWAVTHFDDLGVYRLLSLVEDDRELESFAQETLRELTADTPEAQDMRR 486 Query: 326 TLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 TL N+ T++ L H NTL YR+ ++ ++ G + + RL L +AL++ R Sbjct: 487 TLEVLLATNINIAETARQLHFHYNTLRYRVVKLEKMLGSFTDHPELRLDLSLALKIMAMR 546 >UniRef50_A8VUR2 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUR2_9BACI Length = 583 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 121/322 (37%), Gaps = 19/322 (5%) Query: 79 NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRLREELV 136 P+++ G + + + + L A ++ E +L + Q+ + E + Sbjct: 263 CCPVQMNVYQKGYLIVFLDIDQAGASERLAVEQAMNVIAFELMKLHAVEQQEQIQKNEFL 322 Query: 137 MNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV----DSAMAELQQLQNA 191 ++ ++ L + G+ + + + D + +E + +NA Sbjct: 323 TEYVEGRFSSEKDLGRRGEGYGLRRSCTYLCVAIRPDHEDELYRGVGQAPESERRLFKNA 382 Query: 192 LTTPER-------NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + + +++V V L P + + K + + M+E+ + Sbjct: 383 IYEQLQIWFDYYFDDVVFFSKNEVYVALIPKPDDEWE---DWLMKGLVTIQKEMEEFLFI 439 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +GN + S++ A T+ G++ E+ + + LL ++ Sbjct: 440 SISFGIGNPAAQLLQVPDSFKEALETLHNGRRMGQEAFIKWTDTKGVTELLRTVSPQKLR 499 Query: 305 NELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L L + + L +TL + HN Q T+KALF+HRNT+ YRL + + Sbjct: 500 EFYESTLKSLVLSSKKEDEDLIKTLTVYLEHNGQIAETAKALFVHRNTVIYRLKKCEDKL 559 Query: 363 GLDLGNFDDRLLLYVALQLDEE 384 ++L + DD L AL + E Sbjct: 560 QVNLKHADDIHKLRTALLVREM 581 >UniRef50_A4JMN4 Transcriptional regulator, CdaR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMN4_BURVG Length = 418 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 115/289 (39%), Gaps = 13/289 (4%) Query: 98 PENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLG 157 P + + + + + L++ LR +L + + A + + LG Sbjct: 133 PYLMDYFDHMSQLISSAYLDEQY--RQARWQESLRYQLHDVVFSRSRDDDAFRKITKALG 190 Query: 158 IDLNQPRVVAIVE---VDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKP 214 +D PR+ + +D + D A+ ++ Q+ + R+ LV +V+ P Sbjct: 191 LDHAVPRIAVALASSALDGEPIQADRALDQIVQVTAGILKTSRDTLVDARHHDRLVIWVP 250 Query: 215 ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG 274 ++ ++ +RV + + ++E + +G G A S A + G Sbjct: 251 SIQQESASASD---RRVAEYMATLQERLPSVTSIGIGLAGVGAQGWAASADEAIRALDFG 307 Query: 275 KQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHN 334 + P+ + + Y D+++ + D N L L RT+ A+F + Sbjct: 308 NRFAPDQKVHRYSDIVIEECIRG--NDSALNYFLSLLNELSVESGAT---RTIEAFFTNR 362 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + T+ AL IH NTL++RL R+ + G L + L +AL+L + Sbjct: 363 RRRKVTAAALDIHPNTLDHRLERVESILGAKLDDARWIAKLEIALKLRD 411 >UniRef50_A0LVE5 Purine catabolism PurC domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVE5_ACIC1 Length = 601 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 109/303 (35%), Gaps = 15/303 (4%) Query: 91 VIGLTGEPENLRKYGELVCMTAEMM--LEQSRLMHLLAQDSRLREELVMNLI-QAEENTP 147 VI + G L A ++ LE +R + + + + + +L+ Sbjct: 273 VIAVDGSQRRLPFVRTTAVEQAALVAALEITRELAVASVERHFASNALHDLVTGGSAGGV 332 Query: 148 ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ----QLQNALTTPERNNLVAI 203 +A G +LN+ V + +D + ++ N T+ RN+ A Sbjct: 333 DSVAYATTFGWNLNRTVSVIVARQHELPGAIDLHPRARELAALRVVNQWTSLVRNHDSAA 392 Query: 204 VSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARS 263 + L + DA + + G F V + T P I R Sbjct: 393 AAAGFAAELVAVV------DAGKAEHIARMVRNELVTTGLGNFSVGISGPGTAPDQIPRL 446 Query: 264 YRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK--TMDNNG 321 Y+ A+ + VG + Y L + LL ++ D + + L L + Sbjct: 447 YQEARVALAVGNRLTGAGAVTSYSRLGIYRLLCNVGPDDLRSFVIETLGPLLRLPQPSRS 506 Query: 322 LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L TL+A + T++ L H NT+ YR+ ++ L G + + + + + VAL+L Sbjct: 507 DLLTTLSALLENRCNVAETARTLHYHYNTMRYRVAKLEHLLGPFIDDAEASMRISVALRL 566 Query: 382 DEE 384 E Sbjct: 567 LEM 569 >UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TL42_ALKMQ Length = 411 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 110/304 (36%), Gaps = 26/304 (8%) Query: 98 PENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRL 156 P + + E++ Q L+ + E +L+ + + Sbjct: 114 PYEISYATIISRGLTEIISNQRNLLQ--------QTEFFEDLLSRDLTKHQRALDRGTYF 165 Query: 157 GIDLNQPRVVAIVEVDSGQLGVDSAMAE-----------LQQLQNALTTPERNNLVAIVS 205 D V ++ ++ ++ L+ ++N ++ + Sbjct: 166 QFDSQLSYTVIVISINERAGCHQYSLETSNEQHGIKLKLLRIVKNVAKNQKKKVICGNKR 225 Query: 206 LTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYR 265 +V+ + N+ + E+++ K + +G + I +SY Sbjct: 226 NQMVVLYGASPNTESIIQKNEVMNYAEEVMKHGKFEAIGCISIGIGRNYDVTKEIWKSYE 285 Query: 266 TAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA----NELARPLARLKTMDNNG 321 A + G+ R + Y L + +L + E+ PL + D Sbjct: 286 EANRAVECGRGR-ESRQVVHYDGLGIYRILSYENLHPELIQLYQEVLEPLVKYDE-DKGT 343 Query: 322 LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L +T+ +F++N S ++ H NT+ YR+ RI E+T +DL + D RL +++AL++ Sbjct: 344 ELVKTVKMFFKYNGNIKRISTEMYTHYNTIVYRIQRIQEITQMDLEDDDTRLNVHLALKI 403 Query: 382 DEER 385 E + Sbjct: 404 LEMQ 407 >UniRef50_C9S158 Transcriptional regulator, PucR family n=7 Tax=Geobacillus RepID=C9S158_GEOSY Length = 542 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 115/311 (36%), Gaps = 8/311 (2%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVMN 138 P++ G + + + + ++ L+ L Q L L + + EE + + Sbjct: 212 PIQFLGNEYAELSIVSTGKEISEFDLLILDRTATALAQHLLRDLYVDEKKRVEENEWLKS 271 Query: 139 LIQAEENTPALTEWAQRLGIDLN-QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 ++ E + + G + N + V +V S + ++ ++ Sbjct: 272 WLEGEHPIENVFSYLAEYGAEPNPKGGTVLVVRFKSSMKQCSNLDMIYFKMLCRTIFEQQ 331 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI--TRMKEYGQLRFRVSLGNYFT 255 V +V N + + + L+ +++ +F V +G + Sbjct: 332 GFSTFPVDFHSSIVFIMINNREMKTWKSRMKIGLNSLLESDYIQKKKLPQFVVGVGKFIE 391 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA-RPLARL 314 + +SYRTA T+ + + FY+DL + ++ + E+ L + Sbjct: 392 NVSHMDKSYRTALETIKIQHHLGGRANSCFYEDLHIYRIISLIHKYNDLYEVVMEYLEPV 451 Query: 315 KTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 D NG L TL + N T++ LF+ R TL +R+ ++ L G D N + R Sbjct: 452 LQYDEKYNGNLLETLKVYLACNGSKKETAQRLFVVRQTLYHRIQKLESLLGEDFMNPEKR 511 Query: 373 LLLYVALQLDE 383 L + ++ E Sbjct: 512 LAIEFMIKAYE 522 >UniRef50_Q46PC8 Transcriptional regulator, CdaR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PC8_RALEJ Length = 494 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 91/392 (23%), Positives = 161/392 (41%), Gaps = 45/392 (11%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRER----IGELHEGALLVLSQGRVV--DIDDA 66 D+ ++++ +N +D G ++GS D R +GE E A L R++ I D+ Sbjct: 122 DLARALGKLLNRAVNFVDTDGLLLGSSDETRAERELGER-ERAYFRLLNNRIILRQIQDS 180 Query: 67 VARHL------HGVRQGINLPLRLEGEIVGVIGLTGEP----ENLRKYGELVCMTAEMML 116 ++ L GV + + P+R+ G I I + G E + E + A + L Sbjct: 181 MSPLLLDAIPEVGVPKRLGCPVRIRGAIAAFIFVDGGDMPLGELDIRATEHASIIAALHL 240 Query: 117 EQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSG- 174 R +HL + RL LV +L++ + E TP E A+ G D + V +V +D Sbjct: 241 VHMRALHLQ--EERLGYALVGSLLEGKFEETPTALERARLSGWDPSGNYRVCLVLLDEPL 298 Query: 175 ---QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + G +++L+ L + L+ +VSL ++ L A G Sbjct: 299 PLSKEGFLRRERWVERLRRYLENSGQPPLI-LVSLNQITFLMAADVEPGPL--------- 348 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 K G +++ G +A+ + ++ + + + + + +Q++M Sbjct: 349 ------WKSLGSRGAALAVSRVHRGITGMAQGGQDVQSLVPLLR----PGKVHHFQEVMF 398 Query: 292 PVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 P L D +A + + L L TL A Q T++ L +H +TL Sbjct: 399 PRALMG-DADARALFIQSKIGPLLNDKKGEALLETLEALCAEGFQLANTARRLGVHISTL 457 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YRL RI L G L + +R L VA+ L + Sbjct: 458 RYRLERIESLLGSALEDQANRFELQVAVALHK 489 >UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBB0_BREBN Length = 514 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 124/311 (39%), Gaps = 19/311 (6%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL--AQDSRLREELVM 137 +P+R E G + LT ++ ++ A + + A + RL+ + V Sbjct: 200 VPIRANREHFGTLTLTKPEHAWKELDDVALQHASTLCALEYVKERAVAATEWRLKGDFVE 259 Query: 138 NLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVD-SGQLGVDSAMAELQQLQNALTTP 195 L+ ++ T L + LG L + V V+ + Q + + L L+ Sbjct: 260 ELLNGQQMTHTELESRCRMLGYPLTGHHLCVAVRVEVADQTMLGDMHQSVITLMRRLSDR 319 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE-YGQLRFRVSLGNYF 254 + + + ++ + P D + + +EQL +R + + +L +++L N Sbjct: 320 HQRSYLLRERPHCLLFILP--------DDQTSLRLLEQLTSRWRGLHPELALQIALSNPC 371 Query: 255 TGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA-----NELAR 309 ++ + A + + Y+D+ L + ++ N L Sbjct: 372 EQLPNVVSASEEALFALQAYPLLAQSPQILRYRDMQGYQFLFPYHREKESLLRLWNPLLE 431 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 PL R T N L TL + N L TS+AL+IHR+TL+YRL +I E TG L + Sbjct: 432 PLIRYDT-KYNQQLLETLEVYLAQNGNGLQTSQALYIHRHTLKYRLTQIEEKTGYRLEDA 490 Query: 370 DDRLLLYVALQ 380 R L +AL Sbjct: 491 HQRWQLQLALM 501 >UniRef50_D2LXR4 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXR4_BACS4 Length = 417 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 70/400 (17%), Positives = 149/400 (37%), Gaps = 36/400 (9%) Query: 12 QDIVARTMRIIDTNINVMDAR------------------GRIIGSGDRER-IGELHEGAL 52 +++V + ++ + + DA IIG E+ I + + + Sbjct: 19 ENLVDKISDVLSCPVTIEDANHNLLVYSSHDERTDQARIATIIGRRVPEKVINQFWKNGI 78 Query: 53 --LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCM 110 +L V + + + G+ + + ++ +I+G I + + L + Sbjct: 79 LPKLLETNNPVRVPEIIDM---GISNRVAISIKANNDILGFIWVLEINKQLSDNDLALLK 135 Query: 111 TAEMMLEQSRLMHLLAQDSRLR--EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVA 167 A L + + + + +E L+ +T + +L I + Sbjct: 136 MAAETARNQLLQRQVRKQKQTKGYQEFFWQLLTGHLTSTEEIVNKFDQLEIIPPSSFFIV 195 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 I + D + E + + LT ++ V V ++L + +D Sbjct: 196 IFSFNH-----DITLEEERHISYLLTISQQIRTVFYVIDGNELILLSTTVNDNDFDINFS 250 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFY 286 K++ GN + +I SY+ A T + + KQ E + + Y Sbjct: 251 SFLTNFTSQMKKKFSIDDIISGAGNKYNKYENIETSYQQAITVLNLKKQYPDELIKTHTY 310 Query: 287 QDLMLPVLLDSLRGDWQA-NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKA 343 + L + ++ L+ + N + + L++ D +N L TL + + + Sbjct: 311 EKLGIFRYIEFLQQKNKVDNYYNQAILNLESYDQNHNTHLLHTLDTFLSMDSNVNEAANQ 370 Query: 344 LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 L IH NTL YRL RISE+ ++L N +++ L+V ++L + Sbjct: 371 LHIHTNTLLYRLKRISEVGKINLKNMNEKTSLFVDMKLYK 410 >UniRef50_C7MYB4 Transcriptional regulator, CdaR family n=2 Tax=Actinomycetales RepID=C7MYB4_SACVD Length = 619 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 34/304 (11%) Query: 87 EIVGVIGLTGEPE-NLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEEN 145 E++G I LTG P+ + + L + ++R EL+ +L+ A E Sbjct: 338 ELLGSITLTGRPDLDDADRRLFERASVVTALLLLLRRSAAEAEDKVRGELMADLLNAPER 397 Query: 146 TPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIV 204 PA L + +RLG+DL P VV + D +++A R ++A V Sbjct: 398 DPATLLDRGRRLGVDLTAPHVVLTLHADGVSRARLASLAA------------RRAVLAGV 445 Query: 205 SLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSY 264 ++V+L +A D + + +K V GP +A++Y Sbjct: 446 YSEQVVML---------AEATDPGELARKTAAELKALLGCPVTVGAVGPAAGPADLAKAY 496 Query: 265 RTA----KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD-- 318 + + + +G+ + DL L+ S R D A+ + L + D Sbjct: 497 EESVRCVRALLALGRAGHGAAPP----DLGFVGLVLSDRTDV-ASFVRNTLGPVLDYDAA 551 Query: 319 NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 L RTL A+F L +H NT+ RL+RI+ L G D D L L +A Sbjct: 552 RGTELLRTLRAYFACGGNLTRAKDELHVHVNTVAQRLDRIASLLGADWQQPDRALELQLA 611 Query: 379 LQLD 382 L+L Sbjct: 612 LRLH 615 >UniRef50_C7QE98 Transcriptional regulator, PucR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE98_CATAD Length = 609 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 139/445 (31%), Gaps = 82/445 (18%) Query: 13 DIVARTMRIIDTNINVMDARGRIIG-SGDRE--RIGELHEGALLVLSQGRVVDIDDAVAR 69 ++ A I+ + V GR++ G + + A + + Sbjct: 173 ELTAELAHILGGPVLVTTPDGRVLAECGAETVCHLPCF-DAAPEDADHRLRTEAEQPGLT 231 Query: 70 HLHGVRQGINLPLRL----EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 HG + + +P+ G +V G + L L + + + Sbjct: 232 THHGAQHAL-VPIVAGRVDHGRLVAFAG--RRAFDAADVAALERAATVAALAVLKQLAVA 288 Query: 126 AQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPR-------------------- 164 A + + R + + +L+ + P A LG D+ Sbjct: 289 AVEDKYRADFLRDLLTGRLDDPQSAAAHAATLGWDIGPGHAPGHSNGGITRTAIGAGNGS 348 Query: 165 ---------------------------------VVAIVEVDSGQLGVDSAMAELQQLQNA 191 VV + E+D GQ + ++ L+ + Sbjct: 349 PTGANTRADATVTATSAATRPTPKPPTPDSRHLVVLVAELDPGQSVLPASQHALRPARER 408 Query: 192 LTTP--------ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +R N VA + +VVLK D + + + ++ G+ Sbjct: 409 FAAAWQTVVAARDRTNPVAGFNQEVVVVLKTGD------DPDPQVRSLIAEVSGTGGGGR 462 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 F + + +Y A+ + +G++ + L + LL + + Sbjct: 463 RTFSTGVSRRVATVADLPAAYEEARRAVRMGRRLNGPGSVAHFDALGVYRLLSLVPDPDE 522 Query: 304 ANELARPLARLKTMDNN---GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + AR + D + LR TL N+ ++ L H NTL YR+ +I Sbjct: 523 LRDFARQTLKGLAADGDPDAEDLRMTLEVLLDTNLNVAEAARRLHFHYNTLRYRIGKIER 582 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 L G + D RL L VAL++ R Sbjct: 583 LVGPFMERPDLRLDLSVALRILHMR 607 >UniRef50_Q0SAZ0 Probable carbohydrate diacid regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SAZ0_RHOSR Length = 372 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 14/300 (4%) Query: 95 TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWA 153 TG P + A L +R + + + + + R V +L+ + A Sbjct: 74 TGHPLRSEDLYLVEQAAAVCALVVARELVVSSVEEKHRANFVRDLLLGRGGEHEHVVAHA 133 Query: 154 QRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAELQQLQNALTTP--ERNNLVAIVSL-T 207 + G DL++P VV +++ D + + + M +++ A T+ R+ A+ +L T Sbjct: 134 KTFGWDLDRPVVVVVIQPDPVGEDEPSMPTRMPLVERQARAFTSAVAGRDTGAAVTALAT 193 Query: 208 EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 E V+L D + + + G+ F V + I Y A Sbjct: 194 ETVILMGVGT-----DTMNLVHELVAYVRGDGGGGRRPFGVGVSRPTDSVDGIPALYGQA 248 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRR 325 +T + VG+Q + DL + LL + D + A R T D +RR Sbjct: 249 RTALKVGRQITGAWAVTHFDDLGVYRLLSLVEDDRELESFASETLRELTADTPEAQDMRR 308 Query: 326 TLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 TL N+ T++ L H NTL YR+ ++ ++ G + + RL L +AL++ R Sbjct: 309 TLEVLLATNINIAETARQLHFHYNTLRYRVVKLEKMLGSFTDHPELRLDLSLALKIMAMR 368 >UniRef50_Q97J60 Possible transcriptional regulator from leucine-rich protein (LRPR) family n=1 Tax=Clostridium acetobutylicum RepID=Q97J60_CLOAB Length = 397 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 102/263 (38%), Gaps = 12/263 (4%) Query: 128 DSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM---A 183 + E + ++I + + + A G + + +VE+ + + ++ + Sbjct: 132 NQESMENFMKDIIFRDFTFSEDILSRAVAYGYNPKTKYISFVVELHNEKDMLECDLKTKQ 191 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 ++Q+ + + I+ ++++ P + R +E++I++ K Sbjct: 192 YIEQIVIEVLGEWNKRSIHIMQYNSIILMLP--KNEKRTIKNIAMNIIEEIISKAKN--- 246 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DW 302 + +G F+ S A + V K + Y +L + L + + Sbjct: 247 TSVNIGVGGEFSELRDFKISVSEAHRCLKVLKLNNDNNTVISYDELGIYKLFFQMDNLEE 306 Query: 303 QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 L +L D N L TL + + + T++ LFIHRNTL+YR+ RI E Sbjct: 307 MKKFYLDVLKKLIDYDSKNTTELMNTLEMYIKESTNINRTAEKLFIHRNTLKYRIRRIEE 366 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 +T L + + AL++ + Sbjct: 367 ITKCSLKDVNVLFNFDTALKIKK 389 >UniRef50_Q3YB12 Putative regulator n=1 Tax=Geobacillus stearothermophilus RepID=Q3YB12_BACST Length = 642 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 126/312 (40%), Gaps = 18/312 (5%) Query: 81 PLRLEGEIVGV---IGLTGEPENLRK-YGELVCMTAEMMLEQSRLMHLLAQDSRLREELV 136 P+ L+ +IVG + P+ + K + + + L R + R++ + Sbjct: 314 PIYLDRKIVGYCSFLYQETAPQEVDKLIIQHGALACSLYLLNERTR--FNTEQRIKGNFL 371 Query: 137 MNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPE 196 +++ + + +T+ A +G LN P + ++ + V + L N ++ Sbjct: 372 DDILSKQISFEEMTKRAYYIGFQLNDPYFMIAIDTLLQKPSVKEELEFNDDLINDISIFM 431 Query: 197 RNN----LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGN 252 +N L+ S +V+L L + + E+ K + + +Y Q F+V + + Sbjct: 432 KNRGLNALLGQKSGKVIVLLSECLLLKNKMNKENFCKALIDYCS--SKYPQYLFKVGISS 489 Query: 253 YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPL 311 ++ Y + + V + R F+ L + ++ ++ + + L Sbjct: 490 STHSIEEASQLYEECLSALKVANRH---QRIVFFDSLGIEGIMFQMKNISPIQKFIRKKL 546 Query: 312 ARLKTMDNNGLLR--RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 +L D + + +TL + + T++A+ + L YRL +I+E+ +D+ Sbjct: 547 GKLIEEDKSRDMEFTKTLYYYLSNGCNVHKTARAMNFSISGLRYRLQKINEILQMDINLP 606 Query: 370 DDRLLLYVALQL 381 +Y++L+L Sbjct: 607 SVSYQMYLSLRL 618 >UniRef50_A7Z8F6 PucR n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z8F6_BACA2 Length = 531 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 107/313 (34%), Gaps = 10/313 (3%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD--SRLREELVM 137 LP+ + G + + + K L A ++ L + R R E Sbjct: 217 LPILNVEKNCGYLVIPELVQTADKGMILTIEQAANVISFELLKENAVKQFSRRARNEFFS 276 Query: 138 NLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL--QQLQNALTT 194 N I + A+ + +Q + ++D + + +L + + L Sbjct: 277 NFIDRSFTGHEEIKSRAKEFRLRWDQKYMCICGKLDRNEKTISFTENQLVSDHVFDLLEG 336 Query: 195 PERNNLVA---IVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLG 251 + + ++L A +S+ A +EQ +++ + + Sbjct: 337 ELSSFPFPPHLFIKGNVGILLIEATDSWNEMHA-SVISFLEQFQKQVRTQFKRTVSFGIS 395 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL 311 N + ++ A + G Y +P LL L + L Sbjct: 396 NICQKLIDVPDAFTEASDAISSGHLSRSAEFIQIYHAKDVPELLRLLPAEDVKKFYQATL 455 Query: 312 ARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 L + L TL+ + + Q T+K L++HRNT+ YRL + EL G L + + Sbjct: 456 QSLADRQKEDQSLLHTLSVYLETHCQISETAKRLYVHRNTVIYRLEKCEELLGKSLKDPE 515 Query: 371 DRLLLYVALQLDE 383 + L +AL++ Sbjct: 516 TTMRLRLALRMQR 528 >UniRef50_C2XK96 Purine catabolism regulatory protein n=2 Tax=Bacillus cereus RepID=C2XK96_BACCE Length = 540 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 119/313 (38%), Gaps = 10/313 (3%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD--SRLREELVM 137 P+ + + + G L + L A +L + + R+++E Sbjct: 223 FPIYTQNNQYSYLVIDGFISPLNRSMVLAVEQAANVLAFELIKEHSLRQYSRRIQDEFFT 282 Query: 138 NLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD-SAMAELQQLQNALTTP 195 N+I + +T + + + +Q + I ++D + + E + L L Sbjct: 283 NVINSVFSTQDEIINLGKEFNLSFDQKYICIIGKIDIKEFTMSFMEYQEEKDLIYDLIEE 342 Query: 196 ERNNLVA----IVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLG 251 E N+ A + V+L + + + E ++ + ++ Y Q + Sbjct: 343 ELNSYTANVHLFIKDDMYVLLVNCDGIWRQTEKERMISLLKNIQVKIYTYFQKSISFGIA 402 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL 311 N I+ S++ A G+ + YQ + +L + + L Sbjct: 403 NSSEQLLHISHSFKEATDAFYYGEMSGSKEFIEIYQAKEISAILRMIPQEQLKKFYESTL 462 Query: 312 ARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 L + ++ +L TL+ + + T+K LF+HRNT+ YRL + E+ G ++ + Sbjct: 463 HSLANENEKDHAVLLHTLSVYLETHCAISETAKRLFLHRNTVIYRLEKCEEILGRNIKDP 522 Query: 370 DDRLLLYVALQLD 382 ++ L L +A ++ Sbjct: 523 NETLQLRIAFRIK 535 >UniRef50_C0Z511 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z511_BREBN Length = 412 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 71/401 (17%), Positives = 152/401 (37%), Gaps = 41/401 (10%) Query: 13 DIVARTMRIIDTNINVMDARGRIIG------SGDRERIGEL--HEGALLVLSQ------- 57 ++ ++ I V DA ++I S D R + VL++ Sbjct: 18 ELADVIGELLQNPITVEDADHKLIAYSSHGESTDEARWSTIMGRRVPEKVLTRLWKDGVF 77 Query: 58 GRVVDIDDAV---ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM 114 ++ D+ V A+ G+ + + + +R +++G I + + + + A Sbjct: 78 QELLTHDNPVHIPAKDEIGLGKRVAIAIRRGSDVLGYIWAQEVNRPITQEDDEILRQAAR 137 Query: 115 MLEQSRLMHLLAQ--DSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEV 171 + + + + + R+E + L+ ++ A + + A L + L ++ I+E Sbjct: 138 VAVSRLIQRQGKRKAEEQRRKEFLWELLLGNHSSEAGIRQKADTLQMQLPTSYLICIIEA 197 Query: 172 DSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 +L Q R+ L+ +V +++++L ++ RK Sbjct: 198 AGARLD-----------QYLYPLLMRDKLLWVVDGSQIILLIGLSDAKKEKSDVLIRKVE 246 Query: 232 EQLITRMKEYG-----QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES-RCYF 285 + L + + + G + I +SYR A + + K E+ + Sbjct: 247 QFLSDSLGKLEAHVTEGRQVIAGYGRDYKSYTDIVKSYREALHALKIKKLFPQENEGIHG 306 Query: 286 YQDLMLPVLLDSLRG-DWQANELARPLARLKTMDNNGLLRRTLAAWFRHN--VQPLATSK 342 Y +L + L L+ + + L +L+ D + + + T++ Sbjct: 307 YHELGIYRYLLQLKQWEEEQGYQNERLEKLRQYDRDNQTTLLTTLETFLDAAGKVNKTAE 366 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 L IH NTL YRL RI E+ +DL N + R LY+ L++ + Sbjct: 367 RLHIHINTLSYRLRRIEEIMRVDLDNMNQRAALYLELKIAK 407 >UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID=Q9KDY9_BACHD Length = 403 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 124/317 (39%), Gaps = 10/317 (3%) Query: 73 GVRQGINLPLRLEGEIVGVIGLTG--EPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSR 130 G+ + + +R + ++G I + EP + +L M + + + + Sbjct: 89 GLGNRVAISIRQQQFVLGYIWVLELEEPLTDEQLNDLKDMVSLIRAMLIKQQETRFRRRL 148 Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 REE +L Q E + Q G L P +V+ + + L + Sbjct: 149 EREERWRHLYQGTETVAEVKRRFQAEGEPL--PERGVVVQFFCERTIKEEHEQALSFISE 206 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE-YGQLRFRVS 249 + + ++ V L +L D + + ++Q I + + Sbjct: 207 KVKSRILVTFAMLIDGKWTVYLTDSLKKP--LDEQVVKHFIDQWIRSWNDQFSYANVLAG 264 Query: 250 LGNYFTGPGSIARSYRTAKTTMVV-GKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 +G + + ++ S+ A+ + + G+ + Y++ +L ++ +E Sbjct: 265 VGQHCSQLTDVSESFHQAEKVIELKGEFAYELDKVYYFHELGFYRIIVD-SVPILESETV 323 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 + LA L +TL A+ + + A + L +H NTL YR+ RI ELTGLD+ N Sbjct: 324 QTLAAYDQ-KQGTELLQTLEAFLDVDGRNQAAAALLHVHPNTLNYRMKRIYELTGLDVKN 382 Query: 369 FDDRLLLYVALQLDEER 385 D++ LY+ L+L R Sbjct: 383 MKDKVSLYLELKLRRWR 399 >UniRef50_A1SGR6 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SGR6_NOCSJ Length = 438 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 112/314 (35%), Gaps = 26/314 (8%) Query: 96 GEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE----NTPALTE 151 EP + L A L +R + A +++ + + + +L+ + +TE Sbjct: 122 DEPLSSDDVHALERAAAVAALLITREEAVTAVENKYQGDFLRDLLMRRGGLANDQAYVTE 181 Query: 152 WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN-------NLVAIV 204 A G DL +P VV E+D + +Q Q + R + + Sbjct: 182 HAATFGWDLARPVVVVSAEIDPVPGEEPVGGVQRRQWQERFSAAWRQVSNGLGTGIPCVD 241 Query: 205 SLTEMVVLKPALNSFGRWDAEDHR-----------KRVEQLITRMKEYGQLRFRVSLGNY 253 +E+V L P D D R +R + K G+ F V + Sbjct: 242 FSSEVVTLLPLAGYGPEDDPGDRREDEPVAGHDVVRRAVTAVAGDKGGGRRSFSVGVSRV 301 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN---ELARP 310 + +Y A+ + VG++ F+ L L L+ + + + Sbjct: 302 ARTLDELPGAYAQARRAVEVGRRVSGWGSTTFFDQLGLHRLIALIPPEENGELRSFVRDV 361 Query: 311 LARLKTMDNNG-LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 L L + LR TL N ++ F H NT+ YR++++ L G + Sbjct: 362 LGPLAEPTSEAADLRETLQVLLDTNFNVAEAARLQFFHYNTMRYRVSKLERLLGPLSTDP 421 Query: 370 DDRLLLYVALQLDE 383 RL + VAL++ E Sbjct: 422 HLRLDVAVALRVLE 435 >UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N1Y2_CLOK5 Length = 410 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 111/272 (40%), Gaps = 22/272 (8%) Query: 127 QDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDS-----------G 174 + + N+I + N ++ + + ++ VD+ Sbjct: 138 MEQESMNSFIKNIIFGDLNYDEDEVNKSKFYKYNPGKTYCSMVLYVDNFISFVKQGGVWN 197 Query: 175 QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 + +++++ + + I+ T +V++ P +++ + E++ Sbjct: 198 EELETRTRQQIEEIIVNIMNRLNKKSINIIEDTFIVIMFPV----EKYERDKINSIAEEI 253 Query: 235 ITRMK-EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 ++ + + +L+ + +G+++T + S A+ + + +++ Y+D+ + Sbjct: 254 LSNINSKIEELKISIGIGSFWTRLEELKDSVNKAQNALKI--LGGNKNKVCSYKDMGMYR 311 Query: 294 LLDSLRGDWQANELAR-PLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 LL + + L R L L D N+ L TL + N + T++ LFIH+NT Sbjct: 312 LLFDMSKKDEMKRLLREILGELMEYDSKNSTSLVETLKVYINENCNLIHTAEELFIHKNT 371 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 L+YR+ RI E+ +L N + +A ++ Sbjct: 372 LKYRIKRIEEILNCNLRNMEHLFRFDMAFKIK 403 >UniRef50_D1Y5Z2 Putative uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5Z2_9BACT Length = 542 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 115/318 (36%), Gaps = 20/318 (6%) Query: 87 EIVGVIGLTGEPENLRK---YGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE 143 + + PE LR+ + ++L R + R R E VM+++ Sbjct: 216 NVSAWLVFDASPERLREPWSEIPVTQAKGALLLFFQRWSSGAQVERRYRNEFVMDILMNN 275 Query: 144 ENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE------LQQLQNALTTPE 196 + ++ G DL + V + ++D + + AMA L++ + + Sbjct: 276 LRLKDEVWNRSRSFGWDLAGAKKVVVCDIDDYKNRLTRAMAAGQGPAALEESKARIFAVC 335 Query: 197 RNNL------VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 R + V +++ + + + + ++ ++ E V + Sbjct: 336 REFIGRMGRRVPFAEMSDSAAFILSSRGIFEEEQRQLERILTPMMEQIVEQTGFSVTVGV 395 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR- 309 G + Y A+ + + ++ +R ++ + P +L + + A E Sbjct: 396 GGRCGDVFLCWKGYNQARMALELARRTSGGNRVAWWDRMGAPRVLGAALREPAAREFVEA 455 Query: 310 ---PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 PL R L RTL N ++ AL +H NTL+YR +I L D Sbjct: 456 RLGPLLRFDAARKEEPLLRTLETMVACNWSVKKSAAALALHYNTLKYRWGKICSLLSDDF 515 Query: 367 GNFDDRLLLYVALQLDEE 384 + + R + +A++L + Sbjct: 516 SSSESRFCVELAIKLKQM 533 >UniRef50_B4WNM1 Purine catabolism regulatory protein-like family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNM1_9SYNE Length = 563 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 24/320 (7%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELV----CMTAEMMLEQSRLMHLLAQDSRLREELV 136 P+ + E G I L + L EL A ++L + + + A + RL+ + Sbjct: 242 PIVVGEESYGYIWLISGVQPLTPLDELALNHGATVAALILVKEQA--VQAVEDRLQGDFF 299 Query: 137 MNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTP 195 LI ++ + L A+R LN V +V S++ + LQ+ L+ Sbjct: 300 SQLIASDRPSLSQLQALAKRFNYHLNYAHQVLVVRHSCIAPASLSSLR--RSLQSQLSQS 357 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFT 255 + L+ + +VL+ R +E + + I + V +G+ Sbjct: 358 CFSFLLVALESHFAIVLEYHPEQSDRLISEKRGEALADKILSTLDQTAENLVVGVGSICM 417 Query: 256 GP----GSIARSYRTAKTTMVVGKQRMPES--------RCYFYQDLMLPVLLDSL-RGDW 302 G + SY A+ + S R ++DL L + L Sbjct: 418 GEVEATKGLLESYEQAQEAAHISLLLCKRSQSVGVRYPRALAFKDLGLLHWIYHLTPAQR 477 Query: 303 QANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 AN + + L D L TL + H T+KAL++HRNTL R+ I Sbjct: 478 SANAYLQHVRTLVAHDRKRGTQLLDTLEIYLDHGCSISETAKALYVHRNTLLNRIKSIEL 537 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 L LDL + L A++ Sbjct: 538 LCQLDLRDAVQGFNLNAAVK 557 >UniRef50_C1TQL7 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQL7_9BACT Length = 389 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 17/342 (4%) Query: 45 GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKY 104 +L+ G L V S+ H +R + + + +VG + L E+ Sbjct: 43 FKLNSGKLHVFSRNTEFFEQIKTYPHRELLRIFHHTTVSQDNSVVGTLILNRPREDPSST 102 Query: 105 GELVCMTA-EMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQ 162 +L+ + L +R L + R R+ V +L+ + + L A G DL+ Sbjct: 103 TDLLENATLALRLLLNRKHSELKVEQRYRDHCVQDLLFSRIRHPDELENRASLFGWDLSG 162 Query: 163 PRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 + + + D Q + + L + + A V + +L P+ + + Sbjct: 163 SVTAVV----AMAVDTDPEDRIRQTICHRLRSFYPKLIFANVG-HHLALLIPSSTNGSKE 217 Query: 223 DAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 E R +++ L+ R+ +G+ + SYR A + + + + + Sbjct: 218 IFETCRYVRDEI-------TPLKVRLGIGDPRSSFIDAGESYREACQAIEIMDRFLKDWA 270 Query: 283 CYFYQDLMLPVLLDSLRGDWQ-ANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLA 339 + +L LL +L + + + L+ L D NN L TL A R N Sbjct: 271 IARWNELGAYKLLSTLAQKSDGVDFMRQKLSPLVEYDKTNNTELMATLLAIDRGNWNLRT 330 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + +L++H NT++YR RI E+ LDL + + R + ++L++ Sbjct: 331 AADSLYVHYNTVKYRFKRICEVLSLDLDDNEQRFAVSLSLRI 372 >UniRef50_D1CBY0 Transcriptional regulator, CdaR n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBY0_THET1 Length = 493 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 126/310 (40%), Gaps = 24/310 (7%) Query: 80 LPLRLEGEIVGV-IGLTGEPENLRKYGE-LVCMTAEMMLEQSRLMHLLAQDSRLREELVM 137 + +R + + V + L +P+ + + A + +E SRL+ +RLR EL+ Sbjct: 197 IAVRRSNKPIAVLVVLADKPDPTPQEALDIKQTAAAISVELSRLLAAEENKARLRSELIR 256 Query: 138 NLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 +L + + L A +G+ + +VA++ G+ ++ L++ L Sbjct: 257 DLFY-KGSVENLAVRADVVGVSIPNNGIVAVIR------GIPPETNAMELLRDLLPRVSS 309 Query: 198 --NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFT 255 ++ + +E+ +L PA + +++R + + + Sbjct: 310 LLSSYPILYEKSEIAMLLPANLRG---------ESTTSMLSRGGTINVPNIAIGISSQVK 360 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARL 314 I A+ +V ++ + R ++ L+ L G + + L L Sbjct: 361 QISEIPNHLYEARVAALVSEKVY-QGRMVTLEEAKAYGLIAPLAGLEPIKRRVIDILTPL 419 Query: 315 --KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 + N L TL + N ++ L IHRN+L YRL++I +LTG +L + +DR Sbjct: 420 ITEAEGNRSELFATLKVYSECNGNLSEAARILHIHRNSLAYRLHKIEQLTGRNLDDPEDR 479 Query: 373 LLLYVALQLD 382 +L +A+ L Sbjct: 480 FMLAIAVHLY 489 >UniRef50_Q5QJ55 PmoR n=2 Tax=Mycobacterium RepID=Q5QJ55_9MYCO Length = 735 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 124/337 (36%), Gaps = 26/337 (7%) Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVI-GLTGEPENLRKYGELVCMTAEMMLEQSR 120 D+ A G +++P++ G L +P +R L L Sbjct: 389 DMTAADYTDESGQW--VSVPIKAANVRHGQFYALLAQPPTIRDVVILEQAATICALLLGH 446 Query: 121 LMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 L++ RLR E + +L + + A LG L P + ++ + V Sbjct: 447 EESLVSSTERLRSEFIWDLFDGRITSEADIISRALALGFRLAFPARIMLLRAQGFERLVR 506 Query: 180 S---AMAELQQLQNALTTPERNNL---------VAIVSLTEMVVLKPALNSFGRWDAEDH 227 S + E ++ +N ++ + VA S + +L PA A Sbjct: 507 SESWSAEETERARNWISARIATAIAERTGDVVPVAHRSEHFVAILTPAPAGQTTSPAAIA 566 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 + V + Y + +V + ++ + R A+ + Sbjct: 567 KAAVAR-----SPYPSVSLQVGVSRAVNSIEALPGALREARVALSA--VTPERGPVVVLD 619 Query: 288 DLM-LPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 DL L L+ + L L + D + L TL WF + T++ L Sbjct: 620 DLGVLQFLIAPTQAQDLYRYAQAILGPLVSYDERHGSDLVATLDHWFNNGCNSAQTARNL 679 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 +H +L YRL+RI+E++GLDLG+ + RL + +AL++ Sbjct: 680 QLHTKSLTYRLHRIAEISGLDLGSRETRLDIELALRI 716 >UniRef50_UPI0001C423CB hypothetical protein BpOF4_15855 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C423CB Length = 556 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 71/402 (17%), Positives = 142/402 (35%), Gaps = 38/402 (9%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGD---RERIGELHEGALLVLSQGRVVDIDDAVA 68 QD+ + + + D RG + GS I ++ L++ + + + Sbjct: 153 QDVCEYVANTLKAPVLITDNRGSLYGSSKQVTSSLITHFNQYLHKQLTEN-GIIFNHSST 211 Query: 69 RHLHGVRQGINLPLRLE--GEIVGVIGLTG---------EPENLRKYGELVCMTAEMMLE 117 + L L +E ++ G I + G E E K + V + Sbjct: 212 IEWFQYEEDYALVLGVESANQLKGYIIVGGFGPKPFASTEYEEWGKLLKHVSTAIALFFL 271 Query: 118 QSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 + LR++ V L ++ L+ A+ LG LN P V + + + Sbjct: 272 HETAVKETEWL--LRDDFVWELASGGVHSSDTLSSRAKSLGYRLNLPYVSLVATPEYFKQ 329 Query: 177 GVDS--------------AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 + + ++++ + + + E+++ + Sbjct: 330 RFEQEDKLQMSYDHWLHYQIRQIEEEAEKIAKKQALKAMITYQQDELIIFLEVIFDQAAE 389 Query: 223 DAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 A E+ ++ + Y ++F + + G Y+ AK + +GK+R Sbjct: 390 CAMRFINEFEERLSFL--YPSIQFSWGISKQY-GYHLFQECYQEAKKALTLGKKRNGRGS 446 Query: 283 CYFYQDLMLPVLLDSLRGDWQANELARPLAR---LKTMDNNGLLRRTLAAWFRHNVQPLA 339 + D + L++++ E L + + N L T + H Sbjct: 447 RNLFTDTKIDRLIEAMSEVTVLTEFTNHLLDSLIHYSKERNIDLLHTFMTYHSHKGNVSQ 506 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++AL +HR +L YRL +I LTG L N DD LL ++ +L Sbjct: 507 TARALNLHRQSLLYRLRKIEALTGCSLDNADDLFLLDLSTRL 548 >UniRef50_C4GC67 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GC67_9FIRM Length = 298 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 101/262 (38%), Gaps = 14/262 (5%) Query: 120 RLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 R + L + SR + + + ++ + + R + + R + +V Sbjct: 42 RDLLRLTKSSRDKHYFLRRYLSSQLDEDEIRSGFARHHMQASARRALLLVTFPEDLN--- 98 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 ++ ++ L++ + V+ +S+ +L + V L+ M Sbjct: 99 ------EETRSILSSIFPRSQVSPLSMGRDRMLLIVKDKPSSLSP-----MVSALLDTMA 147 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + +V N + +Y+ T++ +GK P + Y L L L+ L Sbjct: 148 SEAMIPVKVVYDNQTVTLADLPAAYQDLVTSLAIGKTFYPAEQVYESASLGLARLIFRLP 207 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 D L + R + F +N+ T++ LFIHRNTL YRL++ Sbjct: 208 EDVCQRYLQEHFLDYDFGRMDADTLRAIHTLFHNNLSLSETARQLFIHRNTLAYRLDKFQ 267 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 + +GLD+ NFD+ + + + + Sbjct: 268 KASGLDVRNFDEAITCRIGMMI 289 >UniRef50_A1R5V9 Putative uncharacterized protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5V9_ARTAT Length = 537 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 140/384 (36%), Gaps = 49/384 (12%) Query: 14 IVARTMRIIDTNINVMDARGRI-----IGSGDR-------ERIGELHEGALLVLSQGRVV 61 + R+ I + DA G+I IGS R+ A L +S G V Sbjct: 172 LAKVLSRLTGRPIYIEDAFGKISAEAGIGSTPPYPRLPAAARLRT----AQLWISSGLPV 227 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ--S 119 + + L L GE++G + + + A +LE S Sbjct: 228 SEHRRL----------VALALS-HGEVLGAVCMLETDLPVTAANVFALKYAARLLEAELS 276 Query: 120 RLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 L + +L +LV L+ E A LG D++ P+ V + D Sbjct: 277 HRRALALLELKLGRDLVDELVSGMEAATA-VVRTAALGYDISGPQHVVVAVW-EPPRTDD 334 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + + L++ L + LV+ S + V++ + + ++ Sbjct: 335 TVVDALRRTFQKL---HCSALVSGRSDMAVAVVRGDPLGAEVYSV---------VAKTLR 382 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 V +G I RS+ A + + + + L + +LD+ Sbjct: 383 SATG---SVGIGGSSLDVEQIPRSFSEALHALHIRTASIDCYGATRFDQLGIYRILDTAG 439 Query: 300 G-DWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 L L L+ D + L +TLA + H T+++L IHR+TL YRLN Sbjct: 440 NVPDLVGYLDEWLGDLQRSDESRGSDLVQTLAQYLDHGGNYDKTAESLAIHRSTLRYRLN 499 Query: 357 RISELTGLDLGNFDDRLLLYVALQ 380 I ++TG DL + + RL L+VA + Sbjct: 500 SIRQITGFDLAHPETRLNLHVATR 523 >UniRef50_B0A6R8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6R8_9CLOT Length = 389 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 111/252 (44%), Gaps = 11/252 (4%) Query: 136 VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT-- 193 + + I + + +R+G VVAI+E++ + ++ A + +++ + Sbjct: 139 IKDAIFLPTHEELYVQQLERVGFKCGWDYVVAIIELEDDEYNTNNIPAYAEMVKSYIEKK 198 Query: 194 -TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGN 252 + RN+ A+ + ++ + + D E + E I+ K++ L+ + +G Sbjct: 199 LSYIRNDYFAVNIGKSVAIV-----FYNKTDLEVEKIMKELYISMNKDFRNLKLFIGIGK 253 Query: 253 YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL-ARPL 311 + + Y AK + + Y ++ + LL + E + + Sbjct: 254 RVNNLKLLYKGYEEAKNVAKINRLISNNKVHIRYSEMAIYRLLLEMENKEIIKEFHDQTI 313 Query: 312 ARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 L D NN L ++F +N + T+K+L++HRNT+ Y++++I E+ ++L + Sbjct: 314 GDLVVYDKVNNTDYVELLESYFENNCKINETAKSLYLHRNTVNYKISKIEEILDINLDDI 373 Query: 370 DDRLLLYVALQL 381 D+ +Y++L + Sbjct: 374 GDKSKIYLSLMI 385 >UniRef50_C4G116 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G116_ABIDE Length = 387 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 130/318 (40%), Gaps = 20/318 (6%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM--LEQSRLMHLLAQDSRLREELVMNL 139 + L E++G I + EN+ + + V + L + + L++EL++++ Sbjct: 69 IGLSNELLGKILVNISKENITDFQKKVLGYVADVFTLINREKFSVERVEKDLKQELILDI 128 Query: 140 IQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ---LGVDSAMAELQQLQNALTTP 195 ++ L ++ G ++ VV I ++D + + + + +++ ++ + Sbjct: 129 CTGNIKSREELNIRSKLNGWEIKDNLVVIIFDLDEYKKKTVDLKESSRKIEVVKEKMFRA 188 Query: 196 ERNNLVA-------IVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 +NN + + ++ L N++ +K +++ + + V Sbjct: 189 LKNNFLDAGMTFYNYQNSDSIIFLFEFDNNYLHNKDRLFKKMMQESLD----DFGFTYTV 244 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS-LRGDWQANEL 307 +G SY A+ + +G+ + + Y+DL L LL+S + D A EL Sbjct: 245 GIGRVVNNIFDAPISYTEAREAVKIGRSMLGLGMIHEYKDLELFSLLNSAVNKDILAGEL 304 Query: 308 ARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 RP+ +L D N L N S+ +IH NT +YRL + E+ L Sbjct: 305 MRPIRKLIEYDKENETEYYVFLKELINANWSLTRASENNYIHYNTAKYRLKKTEEIMELQ 364 Query: 366 LGNFDDRLLLYVALQLDE 383 + + R L +AL+L E Sbjct: 365 VDTANSRFKLELALRLYE 382 >UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus RepID=D2LXZ9_BACS4 Length = 538 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 120/310 (38%), Gaps = 14/310 (4%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVM 137 LP+ + G+ + + +++ ++ L+ L Q L L ++ ++ +E + Sbjct: 213 LPVLILGKRFAQLVIVTNNKDITEFELLILDRTATALAQHLLRDLYVEEKKMAQESEWLT 272 Query: 138 NLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 + ++ + + L + + L V V +L Sbjct: 273 SWLEGKYSDEVLHDHISFIDPKLVIQGGVVCVCKQMTIAHSRDIDGTYFKLLFRTVLERY 332 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR-----VSLGN 252 + + V+ + A++ ++R+ R+ + R R + +G Sbjct: 333 GFYLFSTEIRHHVIFI----IGDKRPADNWKERMMAAFNRLNKDSSGRIRMSNVSIGVGK 388 Query: 253 YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA-RPL 311 Y + +SY TAK T+++ + E+ YFY DL + ++ + E+ L Sbjct: 389 YVHALCDMHKSYETAKETLLLQESLTKENSSYFYDDLHMYRIIALTKKHSNLTEIVNDYL 448 Query: 312 ARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 + D NG L +TL + N T+K LFI R TL +R++++ L G D + Sbjct: 449 EPVIAYDRKYNGDLLKTLKTYLSCNGSKQETAKKLFIVRQTLYHRIDKLENLLGNDFMSS 508 Query: 370 DDRLLLYVAL 379 + R+ + L Sbjct: 509 ERRVAIEFML 518 >UniRef50_B0P9V1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9V1_9FIRM Length = 558 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 123/319 (38%), Gaps = 16/319 (5%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLR--KYGELVCMTAEMMLEQSRLMHLLAQDSRLREEL 135 I +P+ + ++ G I + + + + T+ + L+ + + + ++ + Sbjct: 236 ITVPIYSDKKLYGYIFMWEDNREITSVDLAVIEASTSLIALDMIKKISIFEMENNHKVSF 295 Query: 136 VMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ-------Q 187 + +L+ ++ + A+ D+ VA+V+V + + + L + Sbjct: 296 LDDLLVNDDLSQRRALANAEYFDFDIEAVHQVAVVQVCNTNNSLSLSNGALYKMNNSIVR 355 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF- 246 + L+ L+ + +V++ ++ + +E L ++ L F Sbjct: 356 VLRRLSRNAACKLLFVNKCDNIVLVFENKLRSTDLCKQEVTQFMETLCGVLRGDSLLEFI 415 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR-GDWQAN 305 + +G + + +S AK G + Y+DL + L + Sbjct: 416 CIGVGRAYREAADLWKSLAEAKRAASCGP--IDREHALCYEDLGVYRFLSYENLQPELLS 473 Query: 306 ELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L L D ++ L TL+ +F+ N ++ L +H NT+ YR+ RI EL G Sbjct: 474 FYTETLKVLVDYDREHDSELVHTLSLYFKCNGNLKRLAEELGVHYNTVAYRIQRIKELAG 533 Query: 364 LDLGNFDDRLLLYVALQLD 382 + N D L L +AL++ Sbjct: 534 VSFDNSDQLLNLQIALKIH 552 >UniRef50_A1R364 GAF domain protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R364_ARTAT Length = 579 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 118/312 (37%), Gaps = 13/312 (4%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLRE--EL 135 + P+ ++ E+V I TG + A ++ L S EL Sbjct: 264 VRAPVVIKEEVVAWIWTTGPLTKMAPLHRRAIEHAATVMALEFLYTRSGAASVWYRTGEL 323 Query: 136 VMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT 194 + ++I+ +T L QRLG DL QP A++ Q+ D + L N Sbjct: 324 LSHIIRGPRPSTSVLLAETQRLGYDLLQPH--ALIAAPHDQVPEDEVLRRLAGKVNRWNH 381 Query: 195 PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYF 254 + + +V L P GR E R EQ+ + E + V+L Sbjct: 382 DNVPKPLVGLHKDYVVALWPL----GRRPLESVRDIAEQIRQSLTEAETSQL-VALTGPV 436 Query: 255 TGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA-RPLAR 313 T P + ++ A+ + + + + S+ DL + L + R L Sbjct: 437 TDPNAYEEAFSIARGAVELARLKGTPSQTLLLTDLGIAGLFLQTQDSAGLRSFCDRILGP 496 Query: 314 LKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 L D N L +TL +N+ T++ L ++ T+ R N I +L GLDL N Sbjct: 497 LHRYDATNGAALLQTLTVLMNNNLDAQMTAEHLTVNTTTITQRRNLIEQLVGLDLSNVTA 556 Query: 372 RLLLYVALQLDE 383 + ALQL+E Sbjct: 557 LTQVSAALQLEE 568 >UniRef50_C1BDR7 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BDR7_RHOOB Length = 654 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 119/310 (38%), Gaps = 13/310 (4%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM--MLEQSRLMHLLAQDSRLREELVMN 138 + L+G+ G + + L E V A + LE+S E + Sbjct: 309 AVMLDGDCWGYVVVAEHGRRLSPLDEAVVRRAALNIALERSGERRAGTVQWHTIEAFTGS 368 Query: 139 LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN 198 L++ +E+ AL E A+ LG+ L+ PRVV +V + + L + + Sbjct: 369 LLRGDESLAALEERAEVLGLRLDVPRVVCLVAARQKDAPLQISPQMLA--KRLTDRESPS 426 Query: 199 NLVAIVSLTEMVVLKPALNSFG-RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGP 257 ++A S ++ ++ S R + RV +T + L V++ P Sbjct: 427 AVMAAPSGNDIALILELPESADHRRGVAWAKDRVRAAVTGIASEDALN--VAISTVAYAP 484 Query: 258 GSIARSYRTAKTTMVVGKQRM--PESRCYFYQDLMLPVLLDSLRGDWQA-NELARPLARL 314 G R++ A+ + + P ++ +L LL S A L L Sbjct: 485 GEDTRAFNEARQVLSCMHHHLGIPGTQFLTVDELGAGRLLLSSTDPTDALRYAHDALGPL 544 Query: 315 KTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG-NFDD 371 D+ L TL+ + ++ L +H NT+ YR RI +LTGLD+ + Sbjct: 545 LASDSAKTRELLTTLSVFLDAGWSVRRAARLLGVHANTIRYRTARIEQLTGLDVATDAHA 604 Query: 372 RLLLYVALQL 381 +L +AL + Sbjct: 605 QLTAQLALLI 614 >UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C179_9CLOT Length = 538 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 110/288 (38%), Gaps = 9/288 (3%) Query: 94 LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQA--EENTPALTE 151 LT E +++ + + A + +DS ++ + + + + L Sbjct: 243 LTKEEKSIIERCIKILSMALEQARSRQEDRYEFEDSYHKD--LYEYLNGLRQYDDGELKN 300 Query: 152 WAQRLGIDLNQPRVVAIVEVDSG-QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMV 210 + + + + R++ ++++ G G D ++ + +V Sbjct: 301 ILRDIEMPFEKKRIMILLQIQGGFDAGTDYRELIQGCIRKCKEMRGFEPYILSRGRKFIV 360 Query: 211 VLKPALNSFGRWDAEDHRKRVEQLITRMKEYG-QLRFRVSLGNYFTGPGSIARSYRTAKT 269 L + + K + + RM + ++ +G I R+Y+ A+ Sbjct: 361 YLFACTDKSDPFMCSAAGKLADIMAERMGRINDGMEVQIGIGKSSDDFPGIKRAYQEAEK 420 Query: 270 TMVVGKQRMPESRCYFYQDLMLP--VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL 327 + +G++ + + + Y L +L ++ Q + R L +NN L TL Sbjct: 421 AVDIGEKLGMKEQVFAYNQLEFYDYLLQYPVKTKEQCCDSIRCLQEYDE-ENNTELVHTL 479 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLL 375 + H T+KAL+IHRNTL RLN+I EL DL DD + L Sbjct: 480 LGFLEHKFNVSETAKALYIHRNTLINRLNKIKELLYNDLETMDDLMPL 527 >UniRef50_A8VR74 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VR74_9BACI Length = 547 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 120/315 (38%), Gaps = 13/315 (4%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ--SRLMHLLAQDSRLREELVMN 138 P+ E G + L + ++ +++ R L ++ + + + Sbjct: 232 PVLAGEECFGYMILPTTDRQIDPNAKMALEQTSLLMASVFQRDKALKQKEENYLDAFIRD 291 Query: 139 LIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 ++ + + + E A+ DL P + + V + + + Sbjct: 292 VLNEKMGSQFEVIEKAKLFKWDLQFPVALFNMSVRLEDVVKKRRILIQYMENRVVEQFLS 351 Query: 198 NNLVAIVSLTEMV-----VLKPALNSFGRWDAEDHRKRVEQLITRMKEY-GQLRFRVSLG 251 L +S +++ + +F E E+L+ ++ + + + Sbjct: 352 RKLDIHISKIKLIYMDDSICAFINVAFESGIDERLIGVCEELVAYLESHDPDAPLSIGIA 411 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCY-FYQDLMLPVLLDSLRGDWQANELARP 310 + G G +++Y A T + ++ Y+D++L L+D + D +A+ + + Sbjct: 412 DTVEGLGRFSKAYHEAIRTRELSEKIAEGGSFVRHYRDMVLYELIDQISEDVRADFIDKR 471 Query: 311 LARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 + + D L +TL A+ H+ + +LFIH NT YRL ++ EL G+D + Sbjct: 472 IGAVLRYDETKKMELLKTLEAFIDHDFNAQKAAASLFIHYNTFRYRLEKLKEL-GVDYDS 530 Query: 369 FDDRLLLYVALQLDE 383 D + +A ++ + Sbjct: 531 GFDWMETALACRMQK 545 >UniRef50_C3JVB9 DNA-binding protein n=2 Tax=Rhodococcus erythropolis RepID=C3JVB9_RHOER Length = 539 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 82/400 (20%), Positives = 140/400 (35%), Gaps = 37/400 (9%) Query: 15 VARTMRIIDTNINVMDARGRIIG------SGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 ++D I + D R+I GD RI + E V Q V + V Sbjct: 148 ANAVSALLDAPITIEDRSSRVIAFSGRQEEGDGPRIATVLE--RQVPDQYIRVLEEAGVF 205 Query: 69 RHLH-------------GVRQG-INLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAE 113 L+ G + G I + +R E +G + + TGEP + + L Sbjct: 206 DRLYRSDDPVWVSAETLGTKMGRIAVSIRAGDEFLGSMWVATGEPMSDDRMRALRDSAGL 265 Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAI----V 169 + L+ RL + RLR +L+ L+ G+ V+A+ Sbjct: 266 IALQMLRLRGGADAERRLRADLIATLLDGGSGAVDAMNRL---GLGTGPALVMALGRRSF 322 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 E S + L L + A+V+ T VL +S + + R Sbjct: 323 EGSSKPDDAAHVVRLTDALAMHLGAVHSQSAAALVNGTGYAVLSVRGHSPAEAELQAFR- 381 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 + R G + +G T P ++RS R A+ + V + + Sbjct: 382 VASDFLDRTGASG--DTIIGIGRVVTRPAQLSRSKRDAEHALEVLLAGRASGSVATFSSV 439 Query: 290 MLPVLLDSLRGDWQANEL--ARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALF 345 + +L + + A P+ + + D + TL AW + +L Sbjct: 440 HVDAILLEIASEAAAEGFSDLGPIEAIASHDAAHATSFVDTLDAWLNAFGDVGDAAASLH 499 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 +H NT YRL+++ + LDL + + R L V L+L R Sbjct: 500 VHPNTFRYRLSKLKGMAALDLDDPNVRFRLMVHLRLRGPR 539 >UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK00_BACSK Length = 410 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 71/392 (18%), Positives = 141/392 (35%), Gaps = 51/392 (13%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHEGALL 53 V ++ + V ++ ++ D+ R I + ++ Sbjct: 19 QFVEELGDLLKCPVTVENSHHHLLAYSEHGEGTDQARVSTIIGRKVPAPLIHRFWKDGIM 78 Query: 54 VLSQGRVVDIDDAVARHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGEL-VCMT 111 I A + G+ + L +R EG ++G I ++ L Y + + Sbjct: 79 ASLNQSSEPISIAEIPDM-GLGPRVALSVRDQEGRVLGYIWVSETNRTLTAYEQQWLKKA 137 Query: 112 AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV 171 A + + + EE + L+ + E ++ + + ++++ Sbjct: 138 ARKAARLMQKANRYKRGEASNEERLWKLLTNTHELGDIPEEVRQE----ERQSSILLIDL 193 Query: 172 DSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + +++ A + L + +A + +D RK+V Sbjct: 194 ANQLEHMETVQALFESSNAVLFMFDGEFFIAFIY------------------GKDLRKQV 235 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQDLM 290 ++ + ++ GN AR+Y AK + + K+ E + C FY + Sbjct: 236 GAFAEKLPDG----VHIAAGNPSFAVDGCARAYEQAKALLELKKRFGSELADCLFYYEAG 291 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 + + +L+ D N L TLA + + A +KAL +H Sbjct: 292 AYKYIQPYEDTAMIAGDHPAIEQLREYDAENQTSLLETLAMYIEKDGHLTAAAKALHVHP 351 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 N+L+YRL RI+ELTGL L N +R+ LY+ LQ Sbjct: 352 NSLQYRLKRIAELTGLHLRNPAERIGLYLDLQ 383 >UniRef50_C6D0D7 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0D7_PAESJ Length = 524 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 13/283 (4%) Query: 109 CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRV-- 165 + + LE + + ++ + + I L A+ G L + Sbjct: 245 RVGILVGLEMINANARREVELKYIDQFLQDWISGRIVAMEDLKLRAEASGSQLEDQQQLF 304 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 VA+V +G+ V +++L+ R L ++ E++ L P + A Sbjct: 305 VALVRWLNGKPAVKQLQQVVKRLR---AKSLREGLQITIAEGELIFLIPVSMQLSKQTAL 361 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 D + L + + F + +GN + P + SY AK + E Sbjct: 362 D--RVAADLRSVIDSSNA--FSLCIGNVASRPDLVCESYEEAKKIHHISTICNYEEPYVD 417 Query: 286 YQDLMLPVLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 ++ L LL L + + + L D + L T+ +F++N TS Sbjct: 418 FKRLGAFQLLYHLPHSEAVIQYRDQYIVPLLEYDRKHQSQLHETIRVYFKYNRNVKKTSA 477 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 L H NT+ YR+ R+ EL G+++ + DD L LY+A++L+E R Sbjct: 478 ELITHYNTVSYRVERVCELLGINVDDGDDILQLYLAVKLNEMR 520 >UniRef50_D1WRV4 Transcriptional regulator, CdaR n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WRV4_9ACTO Length = 507 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 96/272 (35%), Gaps = 14/272 (5%) Query: 115 MLEQSRLMHLLAQDSRL--REELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVD 172 ++ Q R Q +R L+ L Q + +TPAL G P V + Sbjct: 242 VIGQYRHHDDGEQTARQGPARALIALLHQGDTDTPALANALASCGPLAEGPWRVVVTATG 301 Query: 173 SGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 + A + L++ T + V++ A + D Sbjct: 302 ERTSESTAEAALTEALRHHPATVFAAATAPDTETEAVAVVRGADEAPFSLDEPWPL---- 357 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQDLM- 290 + T P + + A+ + + P R ++L Sbjct: 358 ----LHDCRPGTPLYAGVSALTTEPTGLHAALTQARYALATARHTSPAAGRVTTVEELAS 413 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 L LL + D + AR L L D ++ L +TL + HN T++AL +H Sbjct: 414 LESLLAGVPADVRTIFSARTLGPLADSDTASHHTLLKTLEVFLAHNCSWARTAEALHLHV 473 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 NT+ YR++R+ LTG DL D +L L AL Sbjct: 474 NTVHYRIDRVQLLTGRDLSRLDHKLDLRAALL 505 >UniRef50_Q0RXQ9 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXQ9_RHOSR Length = 424 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 111/276 (40%), Gaps = 12/276 (4%) Query: 92 IGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTE 151 +GL + +R + A+ LE++ ++ +R +L+ LI + + Sbjct: 143 LGLVVAGKIMRHVDLVSTAVAQAYLEEA--SGVMRDREVVRRDLLEALISGNASPERIDR 200 Query: 152 WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVV 211 +Q G+ V +V ++ + + P + V E+V Sbjct: 201 LSQYFGLPTTARYTVFLVRSRKLSRFSPESLRKTLETVRHHLHPTETGFLTGVRDEEVVA 260 Query: 212 LKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM 271 + P + + E R++ + L + RF V + TG G+++ +YR A+ + Sbjct: 261 IYPLHQAASQ--QEMLREQADALAAMLP-----RFVVGVSRAHTGLGTVSSAYREAQDAI 313 Query: 272 VVGKQRMPESRCYFYQDLMLPVLLDSLR-GDWQANELARPLARLKTMDNNGLLRRTLAAW 330 Q E+R FY D ML ++ S E+ PL + D+ L TL A+ Sbjct: 314 A-STQVTDETRAQFYADAMLDHIVASSPFKSVLYEEVIEPLEQYD-RDHRAELVATLRAY 371 Query: 331 FRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 T+K+L + NT+ YRL RI ELTG D Sbjct: 372 CASGFNLAGTAKSLIVQPNTVRYRLKRIHELTGQDP 407 >UniRef50_C6D273 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D273_PAESJ Length = 528 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 142/393 (36%), Gaps = 25/393 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L T ++ II + ++ +RG+I+ + + + ++ Sbjct: 144 LMRMALKTDHINELFDSVADIIGFPMAIVGSRGQIV-----------YNSSQVADTELTG 192 Query: 61 VDIDDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGE-LVCMTAEMMLEQ 118 + + Q +PL + G + L E L AE++ Q Sbjct: 193 SWPWPQQQKWMKSKQWQAFRIPLMKQSRCTGFVLFFNPQLFLSTIEESLYLQAAELLSYQ 252 Query: 119 SRLMHLLAQDSRLREEL---VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 + + ++++ + ++ + E+A R +++ Q V ++ Sbjct: 253 MNFNYEDYFELSVQKDFGVLIKRYLRNGLPIDKVVEYADRWELEVFQSHYVCVLS----D 308 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL- 234 + SA ++L+ + + + + +V+ + L+ F D + V L Sbjct: 309 IAHASATQRAEKLEKLKSDFLSHTKLQELKGMHIVMEEGLLSVFSEHDGQAEDSLVSALN 368 Query: 235 --ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 ++ R ++ + + ++ + T + + + + L Sbjct: 369 VCFASIQRESGESPRAAVSSRKKRADQLYEAFDECRQTQRLASEWRVGQSITSFDTMDLA 428 Query: 293 VLLDSLRGDWQANELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 ++ + + D R L L K D + RTL + + Q T+K L+IHRNT Sbjct: 429 IVFEHVSKDRMEAFCNRWLGGLVNKDPDYANEMLRTLETYLEQDGQLNETAKKLYIHRNT 488 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YR+ ++SE+ G+D +D L L +A + Sbjct: 489 ATYRIEKLSEILGVDFKKMNDLLRLKIAFLFRK 521 >UniRef50_B5CTE6 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE6_9FIRM Length = 554 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 69/404 (17%), Positives = 154/404 (38%), Gaps = 28/404 (6%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNI--NVMDARGRIIGSGDRERIGELHEGALLVLSQGR 59 G + + QDI+ ++D + + + GD R+ EL E + Sbjct: 153 FGRDITSSKTQDILELLSDMVDNPVTLYYSNLNCYVTSGGDHSRL-ELREDLEEYIPS-- 209 Query: 60 VVDIDDAVARHLHGVRQ-GINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 V+ + + G + + + + E+ + +T + L + A + L+ Sbjct: 210 VITKFSYMRQRKKGTGEIQYVIKISVMEEVEAYLVVTEKNRKLSAMDCMAIENAIITLQY 269 Query: 119 SRLMHLLAQD--SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV---EVDS 173 + + + + ++V N++ + E A L I + V + + Sbjct: 270 GFVTEFVQNEIEKKYHRDIVHNVLSGMLGKEEMEEAANLLEIHSEEYYRVVTFYTFQKER 329 Query: 174 GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQ 233 G + + E ++ + T V ++ ++V+++ + E + ++E+ Sbjct: 330 GDMYTSEQLRETGIIEGEIMTLCPGQHV-YRNIDQIVMIQ---RVDEKQKREVYLNKMEE 385 Query: 234 LITRMKE-----YGQLRFRVSLGNYFTGPGSIARSYRTAKTTM---VVGKQRMPESR--C 283 + ++ + + +V +G G ++ SY AK + + K Sbjct: 386 MCAALQNAIRYRHKTEKIQVGIGKMVKGIYNLKDSYYEAKRAISYRDIAKVISGNENQTV 445 Query: 284 YFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 Y DL LL + + + + L RL + + L TL + +N T Sbjct: 446 TLYSDLGFFKLLGDIDDLNTLMDYIPESLQRLYSYNKPQRKDLILTLQTYLDNNQSLNKT 505 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 ++ALFIH T YR+++I ++TG+D N ++ L + + L L + Sbjct: 506 AQALFIHYKTATYRIDKIGKMTGMDFKNPNEMLNVRIGLILYKM 549 >UniRef50_D2LUM4 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUM4_BACS4 Length = 383 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 11/284 (3%) Query: 107 LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRV 165 + ++ + +E + + + + V +L+ E + + L ID + Sbjct: 84 IEKVSIMLNMELANTNARKKIEQKYYNQFVKHLLLGEITSISDVETQNSSLDIDFKKKWF 143 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 + GV E L+ + L+ + + V + + D + Sbjct: 144 QVFILNTEQVGGVK---EEFYYYLRTLSKVVKGQLLGSILHDQFVFVM---IVDVKSDLQ 197 Query: 226 DHRKRVEQLITRMKEYGQL--RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 + ++Q R +Y +L F + +G I SY+ A+ VV + R Sbjct: 198 QNTSFIKQETERFFQYKKLVEDFVLCVGESVQHVEEIPLSYKRAEKVKVVQQHFSFTKRL 257 Query: 284 YFYQDLMLPVLLDSLRG-DWQANELARPLARLK-TMDNNGLLRRTLAAWFRHNVQPLATS 341 Y DL + LL L G + + L L + TL +F+ N T+ Sbjct: 258 VTYDDLQIFRLLYLLPGSEDVVRYVDDILGGLDNEKKRSKDYIETLEVYFKSNRNMRETA 317 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 K LF H NT+ YR+ +I+ L +DL + + L L +AL++ R Sbjct: 318 KKLFTHYNTVVYRMEKIAALLKIDLEDSEAVLELEIALKIRRLR 361 >UniRef50_C8XKF3 Putative transcriptional regulator, PucR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKF3_NAKMY Length = 705 Score = 127 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 80/385 (20%), Positives = 142/385 (36%), Gaps = 36/385 (9%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 +V + + V G +I + H S + + A Sbjct: 332 VVHAVAIELGCEVGVFGPDGAMIAT---------HTPGSTPASLPARLPVRARPATPGRW 382 Query: 74 VRQGINLPLRLEGEIVG-VIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLR 132 VR P+ +G+ VG V+ + GE + L R ++ Sbjct: 383 VR-----PVYADGDQVGQVVLIQGEASAELMDAVAGQVAMACSLALLRERAASRARAQAV 437 Query: 133 EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDS-----GQLGVDSAMAELQ 186 ++++ +L+Q ++ A AQ+LGI L V ++++ + G D++ + Sbjct: 438 DQVLWDLLQGPVQHRVAARSRAQQLGISLLGSLRVLHGQIENVEELAAEQGWDTSHTDKV 497 Query: 187 Q---LQNALTTPERNNL-VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + L+ E L + + +V + L+ D E+ Sbjct: 498 RRGVLRAVRGVDEARRLPLTGMRGDLLVAVAADLDRASVKDLAAATCAAIH-----AEWP 552 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD- 301 LR + P + + A+T + ++ Y++L + LL D Sbjct: 553 GLRLTWGVSRERANPMELPNALSEAETALAAARRL-GGRNALLYEELGIVRLLLGSGNDP 611 Query: 302 ---WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 E+ PL DN+G L RTL A+F + ++ LF+H TL YRL RI Sbjct: 612 DLQTFIEEVTGPLIAYD-RDNDGALIRTLRAFFDADCSQRVAAERLFVHHKTLRYRLERI 670 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 +LTGLDL +DR+ AL+L + Sbjct: 671 RQLTGLDLSRHEDRMRADFALRLLQ 695 >UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=Lactobacillales RepID=C0WN27_LACBU Length = 566 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 132/356 (37%), Gaps = 18/356 (5%) Query: 45 GELHEGALLV--LSQGRVVDIDDAVARHLHGVRQG-----INLPLRLEGEIVGVIGLTGE 97 G H + L++ I+ L +G I P+++ + + Sbjct: 204 GSDHPASFYAEQLNEQDFDKINKEKTSFLINNLKGEKVQMIGYPVKVGSYFPFHLIILKP 263 Query: 98 PENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRLREELVMNLIQAEEN----TPALTE 151 + E A ++L + + L+ + + L++++ + + Sbjct: 264 EQIPYPISEFAIEQAVLVLTFMLYKNHKVQEFFDILKSDFLEQLVKSKTDQVNDNRNWID 323 Query: 152 WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVV 211 + G+ + + + + M ++ + L + + Sbjct: 324 LGRNYGL-VKSSYYQIALAYCAPNKKSKTQMIYRKEEAEIAKLWLQEQLPIKIKDVAIFK 382 Query: 212 LKPALNS--FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKT 269 +K + + + D + + ++ + +K+ + + GN + +I+ S+ AK+ Sbjct: 383 VKNSNETAILFQSDEPNIKDILQDISQSLKDELGINLTFAFGNPYKSIENISSSFIEAKS 442 Query: 270 TMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNG--LLRRTL 327 T+ KQ Y L L + + + L L + G L++TL Sbjct: 443 TLDEAKQLYDPDIVNHYHPKGLVGLFEDTNEENIHYFCEKILKELAYPEEAGVKDLKKTL 502 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + +N + T+ AL++HRNT++YR+ + ++ G+ + N + L L +AL+L E Sbjct: 503 KVYLDYNCEITKTATALYLHRNTIKYRIKQCEKILGMSVKNPQNSLNLRLALELSE 558 >UniRef50_A5D5M5 Regulator of polyketide synthase expression n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D5M5_PELTS Length = 531 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 117/309 (37%), Gaps = 8/309 (2%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE-MMLEQSRLMHLLAQDSRLREELVMN 138 P + +++G + + E + L + ++ ++ + R+ LV Sbjct: 220 FPCLAQNKVMGYVVVAHPGEMDDRAFLLTRQMVSFLSIKLLEKHLMIETEQRMLASLVDE 279 Query: 139 LIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 ++ E + A L + + LG+ + V ++ ++ D ++Q + L Sbjct: 280 VLFRESSDEATLRDRVKLLGLKPQEYHFVLLLAFRH-EISDDILQISIRQWVSRLRNLFP 338 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGP 257 + V + E++ + D ++ + L+ Q + Sbjct: 339 ESAVFLKG-NEIIGIVSLPGKSPLLDPNSIKRNLLNLMNEGIAKPQGEVDLGYSFAVKEI 397 Query: 258 GSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLAR-LKT 316 + Y A+ + +G+ P++ +FY + + L+ G + N L + L LK Sbjct: 398 CRLKECYEQARKAISIGRAFKPQNNVFFYGEFLKEALILRGIGSHEYNLLIKQLIDPLKK 457 Query: 317 MDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLL 374 D N L TL + ++ L IH +TL YRL RI E+TG+D + L Sbjct: 458 YDQKYNTELWPTLEKCLLVS-SLEKVAQDLHIHISTLRYRLQRIYEITGVDYFTVQGKFL 516 Query: 375 LYVALQLDE 383 L +A ++ Sbjct: 517 LNLAYIAEK 525 >UniRef50_A6CS53 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CS53_9BACI Length = 533 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 108/288 (37%), Gaps = 9/288 (3%) Query: 102 RKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVMNLIQAEENTPALTEWAQRLGID 159 +Y L+ L Q + L + + +E +M ++ E+ L+ + LG Sbjct: 235 SEYELLLLDRTSTALAQYLMRELYFNEKKRLDESRWLMAWLKGEQTGDKLSSYLSDLGER 294 Query: 160 LNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSF 219 + VV I ++ + + + ++ + ++A ++ + S Sbjct: 295 ITGG-VVCICQLQKVKEKEQLDLTYFNLIARSIFEQQGYKVLAEKEGDNLIFILLDNRSS 353 Query: 220 GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP 279 W E+++ + G Y I +SY++A +++ + Sbjct: 354 KTWKTR-ISDAFEKILETEFFQKAKDIHFAAGKYQEEIKDIHKSYQSANESLLYRSKDCG 412 Query: 280 ESRCYFYQDLMLPVLLDSLRGDWQ----ANELARPLARLKTMDNNGLLRRTLAAWFRHNV 335 R +FY DL L L+ ++ + +E P+ + D+ G L TL + Sbjct: 413 SKRFHFYDDLHLYRLISIVQQNMNLQEMVDEYLEPILKYDK-DHAGSLLHTLKVYLGCQG 471 Query: 336 QPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T+ LFI R TL +RL +I EL G D + R+ + L + Sbjct: 472 SKQETATRLFIVRQTLYHRLKKIDELIGEDFMQPEKRVAIEFLLHAHD 519 >UniRef50_B8FZU5 Putative transcriptional regulator, PucR family n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FZU5_DESHD Length = 515 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 114/311 (36%), Gaps = 20/311 (6%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLRE---E 134 I + + + + V + + + R Y + ++ + + D RE E Sbjct: 210 ICMNVFFQDDFVCRVVIAEDRSTFRGYEAGLLHFFTSFIQLVYDLAGYSGDIMPREHMVE 269 Query: 135 LVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT 193 + LI E L + G + + P + A + + Q + Sbjct: 270 IFSALISGESIESWRLKNSVSQHGWNYDGPFLCASIMPSDRDYYNRTIPYYCQMINRDFK 329 Query: 194 TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 A ++V + G + + ++ FRV N Sbjct: 330 GC-----CAFEYERKIVCIVNLEYYNGSGECFNSV--------YLETLRDGYFRVGYSNV 376 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LA 312 FT I Y AK ++ +G + P Y + D++L + L + L P + Sbjct: 377 FTSIVDIQAHYVQAKISLRIGLDQFPSRWYYKFSDIVLFYMESKLTEELDGQFLCSPKII 436 Query: 313 RLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 L + D N+ TL + + + + T+K LFIHR T+ RL RI EL G++ + D Sbjct: 437 GLDSYDRANSSDYLHTLKVYLDNQMNAVKTAKDLFIHRATMVNRLERIKELAGINFKDPD 496 Query: 371 DRLLLYVALQL 381 D L + ++++L Sbjct: 497 DILYIKISIRL 507 >UniRef50_A9AWI2 Putative transcriptional regulator, PucR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWI2_HERA2 Length = 477 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 18/308 (5%) Query: 79 NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 +P+ L+G VG +G G + G L +A + L + + A + RLR ++ + Sbjct: 173 TVPVLLDGHRVGFLGSIGS--HPWDAGALEQGSAALSLLLDKERAIEATEDRLRGSVLES 230 Query: 139 LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN 198 L+ A GI L+ +A + L +D MA +++ + L P Sbjct: 231 LLAGIPLDVPGQRRAAEQGILLDSAYALAALR-PQDSLQIDRVMAAVRRACDRLRYPA-- 287 Query: 199 NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPG 258 I ++VL ++S ++ +R+ ++ + + E + G + G Sbjct: 288 ---FIADHDGIIVLAMPIDSL-----DNPEQRLREVHSALHEASWV-LDGGFG-IASENG 337 Query: 259 SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTM 317 + + ++ A + +G++ + +L + LL S+ +A R + L Sbjct: 338 AWSGAWAEAIGALRLGRELLGAGVLAGGAELGVYRLLLSVADSARARMFYDRTIGPLAAH 397 Query: 318 D--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLL 375 D +G L TL +F + + AL IHRNTL YRL RI +T L DRL L Sbjct: 398 DAKQDGDLLYTLQMFFAYLGNHSQAAAALHIHRNTLLYRLGRIENITSHHLDRAPDRLAL 457 Query: 376 YVALQLDE 383 + L L Sbjct: 458 QLGLALHR 465 >UniRef50_B5HA48 Regulatory protein n=12 Tax=Streptomyces RepID=B5HA48_STRPR Length = 388 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 106/286 (37%), Gaps = 18/286 (6%) Query: 95 TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ 154 T PE++ E E+++ + + ++ R E + +L+ + L + A+ Sbjct: 105 TTSPESVLAAVEQAIDAFAGGYERAQRLA-VRKEEAARREFIDDLLYGRSDPGRLAQRAE 163 Query: 155 RLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNAL-TTPERNNLVAIVSLTEMVVLK 213 R G+ L V V +G D + ++ AL + ++ ++ + Sbjct: 164 RFGLRLAHAHAV---AVAAGPEPYDDTHPVTRSVEAALLSRFGDRRILLTTKDGRLICVV 220 Query: 214 PALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV 273 PA ++ V + + R ++G G G + RSY A + + Sbjct: 221 PAD-----------QEEVVRYFAKQAHAATDGGRAAIGRPHPGAGGVVRSYEEALNALDL 269 Query: 274 GKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGL-LRRTLAAWFR 332 + + DL++ +L R + A+ + L L+ L TL A+F Sbjct: 270 ADRIGLDDPVLHAADLLVFPVLARDR-EAMADLVDSALGPLQQARGGAQPLLDTLHAYFD 328 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 ++ L + L YRL RI LTG D + R +L A Sbjct: 329 AGCVAAQAARTLRLSVRALTYRLERIHRLTGSDPTDPQHRYMLQTA 374 >UniRef50_A9KS82 Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS82_CLOPH Length = 520 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 124/311 (39%), Gaps = 29/311 (9%) Query: 82 LRLEGEIVGVI-GLTGEPENLRKYGELVCMTAEMM-LEQSRLMHLLAQDSRLREELVMNL 139 + +G + + GE L + E++ + + ++ + L + + L EL+ ++ Sbjct: 210 VFHNQTQIGFLLMIEGENNFLPYHFEMLSIISHVISYTIAYYTPNLFEKNSLYHELLYDM 269 Query: 140 IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG---QLGVDSAMAELQ-QLQNALTTP 195 + + A+ + +V + Q S L+ Q+ T Sbjct: 270 LIGAPEKDIMPRLAE---LHFPDKMLVLFIRPTKYLGLQYLKSSVCKNLKIQIPGTHVTY 326 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFT 255 +N +VA++ L E + L + ++ + R+ + N F Sbjct: 327 HKNGIVAVIPLKEDTEMNLMLLELLKCFSK-----------------KEHIRIGISNSFA 369 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARL 314 + Y A + +G + PE Y YQ+ + L + + P LA L Sbjct: 370 CIENFVSHYEQAHAALKLGHKLNPEGLVYHYQNYQIFDLFSEAKNPDKLGRFCHPALAVL 429 Query: 315 KTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 + D+ L +TL + TS++LFIHRN+L YRLNRI+EL+ +DL + + Sbjct: 430 RQYDHENSSQLYKTLCVFINKGCNIKLTSESLFIHRNSLVYRLNRITELSQVDLSDINTL 489 Query: 373 LLLYVALQLDE 383 LL ++ +D+ Sbjct: 490 FLLRLSFLIDQ 500 >UniRef50_C7PZT6 Transcriptional regulator, CdaR n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZT6_CATAD Length = 515 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 124/355 (34%), Gaps = 32/355 (9%) Query: 49 EGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIV-----------GVIGLTGE 97 V + + + A +R G LP R+ V + G+ Sbjct: 170 PAGRPVAASHEPLPPSETEATVREALRAG-QLPARIRRRSVFAISSGSPLTDWYLVFDGD 228 Query: 98 PENLRKYGE-LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRL 156 E + L A ++ + + + R ++ LI + + A + Sbjct: 229 YERWDPRRQALASKAAAVLAIERERLAARREPLRQLGADLVRLIAEDGGVAEIAARADLV 288 Query: 157 GIDLNQPRVVAIVEVDSGQLG------VDSAMAELQQLQNALTTPERNNLVAIVSLTEMV 210 G+ + + + G ++ EL+ +++ V Sbjct: 289 GVGADTEVQAVALAGPAHHSGAILRALLEDVTEELRLRGQRRDAAADHDVPVAEFADHAV 348 Query: 211 VLKPALNSFGRWDAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKT 269 L P D + L+ M G+ + +G+ + + A+ Sbjct: 349 ALVPNP-------PPDVAGHLRDLLGGMTAGLGREHLAIGVGSRRA--AGLRATVDEARH 399 Query: 270 TMVVGKQRMPESRCYFYQDLMLPVLLDS-LRGDWQANELARPLARLKTMD--NNGLLRRT 326 + +G+ R + +++L VLL S L D + R L L+ D + L T Sbjct: 400 ALRIGRARSDQVSVIGHEELASHVLLLSGLPEDVRVAYRDRLLGPLRAYDALHRSDLEAT 459 Query: 327 LAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L A+ + ++ + +H NTL YR+ RI ELTG L + + ++ L++AL+L Sbjct: 460 LEAFLACSTSWTRCAEQMHVHVNTLRYRVARIEELTGRSLADLETQVDLFLALRL 514 >UniRef50_C1YTW9 Sugar diacid utilization regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YTW9_NOCDA Length = 520 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 109/286 (38%), Gaps = 11/286 (3%) Query: 102 RKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLN 161 ++ + + + L +SR D+R E L L + Sbjct: 242 EEHESVAELVSIAGLARSRAEERALTDARHLEGLPRLLAAQRFDEVTELLRGTDPTGGQG 301 Query: 162 QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGR 221 VV+ V + ++ + L+ + + + + + + P + R Sbjct: 302 SHVVVSAVMLPEPRVPDLARRVLLELVADRPGA-------VVTGDEDALAVVPVAGTDAR 354 Query: 222 WDAEDHRKRVEQLITRMKE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 AE+ R + ++ R + L + G + + A+ + + R Sbjct: 355 ARAEEVRSALLHRARVLEGGLLDHRLAIGLSSAVRGVPDLRGAAVEARHARRLAELRGGR 414 Query: 281 SRCYFYQDLML-PVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQP 337 SR ++ +LL S+ + Q++ R L L D + L RTL + H+ Sbjct: 415 SRVIAGAEIDSHELLLASVPEEVQSSYRERLLGPLLAYDRDHRSELVRTLEQFLAHSGSW 474 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + + +H NTL YR+ R+ ELTG DL + + R+ L++AL+L + Sbjct: 475 QRCAATMHVHVNTLRYRIGRVEELTGRDLSSLEHRVDLFLALKLRD 520 >UniRef50_A0R6B7 GAF domain protein, putative n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R6B7_MYCS2 Length = 578 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 77/379 (20%), Positives = 127/379 (33%), Gaps = 22/379 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGD--RERIGELHEGALLVLSQGRVVDIDDAVARHL 71 I A +I I + D + ++ + A + V + Sbjct: 208 IAAVLQGLIGRPILIDDIQHEVLACSVVTTDFPDTTWRAAAEAGTGSSPVPVGQFDGTTY 267 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM--LEQSRLMHLLAQDS 129 + + L E+ I +L A ++ LE R + Sbjct: 268 ------LASAVHLGDEVAARIWFPETSIDLDPIMVRAVEHASIVTALELLRCQTAAEVEQ 321 Query: 130 RLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ-Q 187 RLR EL+ +++ + L + A RLG DL P + + + E Sbjct: 322 RLRGELLSDVLSSGAALSDRLLDRAHRLGHDLTVPHIAIVGAFTGLDPVAERRAYERSLV 381 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 L + R V + +V+L PA ++ A + V Q + Q Sbjct: 382 LLAKESAAHRPKPVVAMHAGTIVMLWPAQDAADAAGAGEV---VRQAMRAASADRQATVA 438 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANEL 307 V G+ + SY+TAK + V + DL + LL + + Sbjct: 439 VGPGDVASH----RESYQTAKGALQVAIMSGRTAAVVGLDDLGIAGLLLRINDPAALSTF 494 Query: 308 AR-PLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 AR LA + D+ L TL A+ + AT+ L IH NT+ RL RI L + Sbjct: 495 ARRTLAPILDYDHAHRTELLVTLRAYLECRQERSATATRLVIHPNTVAQRLRRIESLCSV 554 Query: 365 DLGNFDDRLLLYVALQLDE 383 L + L AL + + Sbjct: 555 TLTDPAVILQFSAALTVYD 573 >UniRef50_B1HSD1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HSD1_LYSSC Length = 356 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 137/329 (41%), Gaps = 22/329 (6%) Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 +I++ ++++ + IN LEG I L E E + A + +EQ + Sbjct: 31 EIEEVRYKNINFTIKWINEKNTLEGGIFIWGLLNEESAEAPVAIEHAALIANLHVEQQNI 90 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDSGQLGVD- 179 + + + R E +++LI T L L I L+ ++A+V++ + Sbjct: 91 IKSI--EQRQMNEFLLDLINDNYQTKELLNKKLIDLDITLHDQYIIALVQIQPINNAITL 148 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + E+ N + NN++ + L +++ +N ++R ++ L+ + Sbjct: 149 PSYHEILSFFNWSNLCKENNILTGLDLNSKIIILLPIN--------NYRSLLDHLVYDIS 200 Query: 240 EY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV-----GKQRMPESRCYFYQDLMLPV 293 ++ ++RF V + + S+ YR A+ + + + +L L Sbjct: 201 KHFPKIRFSVGVSRKYN-FNSLKECYREARIALNTIVKQSANVQDSRLIIVEFSNLYLER 259 Query: 294 LLDSLRGDWQANELA-RPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 +L S D + + L + D N TL + + N+ T++ L++H+NT Sbjct: 260 VLYSENSDLEMRYIYMETLDPIIQYDKKNKSNFLDTLEHFIKSNMNIEVTAQQLYLHKNT 319 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVAL 379 + YR+ ISEL +D N + +LL +A Sbjct: 320 IRYRMKLISELMNIDFNNLNTIMLLKIAF 348 >UniRef50_B4BLE6 Transcriptional regulator, PucR family n=2 Tax=Geobacillus RepID=B4BLE6_9BACI Length = 560 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 29/308 (9%) Query: 94 LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEW 152 +T E + + +Y +T + L + M + + RL+++ V +L E + + Sbjct: 254 ITKEQQYMLEY-----ITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYHSWDYILSR 308 Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN-------------- 198 A+ LG ++N P V I ++ + + + + R+ Sbjct: 309 AKSLGYNVNLPYVCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVVLAGKWIHK 368 Query: 199 NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPG 258 ++ +++ + + VE + K + L + G Sbjct: 369 EVMVTYQQERLIIFLETTLNQVQDVVNLFLDHVENRLK--KRFPGLMMSWGIAEQQAGIR 426 Query: 259 SIARSYRTAKTTMVVGKQRMPESRCYFYQDL---MLPVLLDSLRGDWQANELARPLARLK 315 + S+ AK + +G+++M Y Y + + +LL + + + +L Sbjct: 427 TFHDSFNNAKIALDIGRRQMGPG--YRYTQVNTSIFRILLPLSKNPDVLGIVLSTIEQLI 484 Query: 316 TMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 DN+ G L TL + R+ T++ L +HR+TL YRL +I LTG L N DD Sbjct: 485 DYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNPDDLF 544 Query: 374 LLYVALQL 381 LL + ++L Sbjct: 545 LLDLCIKL 552 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammapro... 382 e-104 UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax... 338 2e-91 UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=S... 335 2e-90 UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=... 320 6e-86 UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconac... 314 4e-84 UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=M... 314 5e-84 UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gamm... 312 1e-83 UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator ... 311 2e-83 UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gamm... 311 4e-83 UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobact... 307 6e-82 UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera ... 305 2e-81 UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Ta... 299 1e-79 UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=... 294 4e-78 UniRef50_A7JU45 Sugar diacid utilization transcriptional regulat... 291 2e-77 UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteure... 288 2e-76 UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulat... 286 1e-75 UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiel... 286 1e-75 UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 283 6e-75 UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=... 282 1e-74 UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobac... 281 2e-74 UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobac... 281 3e-74 UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacil... 281 4e-74 UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoan... 279 9e-74 UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobac... 278 2e-73 UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 272 1e-71 UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinob... 271 5e-71 UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacil... 270 6e-71 UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional reg... 270 8e-71 UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 269 1e-70 UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholder... 265 1e-69 UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus ... 262 2e-68 UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillu... 259 2e-67 UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus su... 259 2e-67 UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacteriu... 256 8e-67 UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 ... 256 1e-66 UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudom... 255 2e-66 UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=S... 255 2e-66 UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquet... 254 4e-66 UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethi... 252 1e-65 UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia... 251 3e-65 UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Ta... 251 4e-65 UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacil... 250 6e-65 UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacilla... 250 6e-65 UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiob... 249 2e-64 UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=... 247 5e-64 UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethi... 247 6e-64 UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 ... 246 9e-64 UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clos... 246 1e-63 UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coproco... 245 1e-63 UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicut... 245 3e-63 UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillu... 245 3e-63 UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostri... 242 2e-62 UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 242 2e-62 UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=M... 240 4e-62 UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobac... 240 9e-62 UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=... 239 1e-61 UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=... 239 1e-61 UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax... 239 1e-61 UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brach... 238 2e-61 UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 ... 238 3e-61 UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Ente... 237 4e-61 UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicut... 237 5e-61 UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales ... 237 5e-61 UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacteriu... 237 7e-61 UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staph... 236 9e-61 UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 236 9e-61 UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=M... 234 4e-60 UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 T... 233 7e-60 UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacil... 233 8e-60 UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotro... 232 1e-59 UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=C... 232 1e-59 UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=... 232 2e-59 UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 231 3e-59 UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 230 6e-59 UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactoba... 229 1e-58 UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteri... 228 3e-58 UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacil... 227 5e-58 UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermoba... 226 9e-58 UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactoba... 224 5e-57 UniRef50_C0ZJB8 Putative transcriptional regulator n=2 Tax=Bacil... 224 6e-57 UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax... 222 2e-56 UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus c... 222 2e-56 UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 221 3e-56 UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=C... 220 5e-56 UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteri... 220 5e-56 UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 217 5e-55 UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostri... 215 2e-54 UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostrid... 214 5e-54 UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobac... 213 6e-54 UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicu... 212 2e-53 UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 212 2e-53 UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains ... 212 2e-53 UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID... 211 3e-53 UniRef50_C9S1P6 Putative transcriptional regulator, PucR family ... 211 4e-53 UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=L... 211 4e-53 UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostrid... 210 7e-53 UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostri... 210 7e-53 UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttle... 209 1e-52 UniRef50_C0ZE84 Putative transcriptional regulator n=1 Tax=Brevi... 209 2e-52 UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepI... 208 2e-52 UniRef50_D2M035 Transcriptional regulator, PucR family n=1 Tax=B... 208 3e-52 UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria... 208 4e-52 UniRef50_O32138 Purine catabolism regulatory protein n=3 Tax=Bac... 207 6e-52 UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria ... 207 6e-52 UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=N... 207 6e-52 UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmic... 207 6e-52 UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostri... 206 1e-51 UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 205 2e-51 UniRef50_UPI0001C423A1 putative transcriptional regulator n=1 Ta... 205 3e-51 UniRef50_C1B522 Putative CdaR family transcriptional regulator n... 204 5e-51 UniRef50_D1Y2S3 Putative transcriptional regulator, CdaR n=1 Tax... 204 5e-51 UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethioba... 204 6e-51 UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 203 7e-51 UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Strepto... 203 8e-51 UniRef50_Q9KC39 BH1735 protein n=1 Tax=Bacillus halodurans RepID... 203 1e-50 UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminoc... 202 1e-50 UniRef50_A7Z8F6 PucR n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 202 2e-50 UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID... 201 3e-50 UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=D... 200 6e-50 UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethi... 200 9e-50 UniRef50_UPI0001C4248F putative transcriptional regulator n=1 Ta... 200 9e-50 UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobac... 200 1e-49 UniRef50_B5CTE6 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 1e-49 UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n... 199 1e-49 UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=P... 199 1e-49 UniRef50_B7JD78 Putative uncharacterized protein n=10 Tax=Bacill... 198 2e-49 UniRef50_Q0S5V7 Putative uncharacterized protein n=1 Tax=Rhodoco... 198 2e-49 UniRef50_B8FTC8 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 198 3e-49 UniRef50_D1A7Y9 Transcriptional regulator, CdaR n=1 Tax=Thermomo... 198 4e-49 UniRef50_A8RX21 Putative uncharacterized protein n=3 Tax=Clostri... 197 7e-49 UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodoco... 196 1e-48 UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillacea... 196 1e-48 UniRef50_D2LXR4 Putative transcriptional regulator, PucR family ... 196 1e-48 UniRef50_D2B3U7 Putative transcriptional regulator, PucR family ... 195 2e-48 UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdol... 195 2e-48 UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces R... 195 2e-48 UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=C... 194 4e-48 UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=C... 194 4e-48 UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=R... 194 5e-48 UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelot... 194 5e-48 UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostri... 193 1e-47 UniRef50_A8VUR2 Putative transcriptional regulator, PucR family ... 193 1e-47 UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacter... 191 4e-47 UniRef50_A3TQC7 Transcriptional regulator n=1 Tax=Janibacter sp.... 191 4e-47 UniRef50_C2XK96 Purine catabolism regulatory protein n=2 Tax=Bac... 191 4e-47 UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 190 5e-47 UniRef50_D1C782 Transcriptional regulator, CdaR n=1 Tax=Sphaerob... 190 5e-47 UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostri... 190 6e-47 UniRef50_A8FH41 Transcriptional regulator n=2 Tax=Bacillus pumil... 190 7e-47 UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=M... 189 2e-46 UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliph... 188 2e-46 UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminoc... 188 2e-46 UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus ... 188 3e-46 UniRef50_Q9KBD4 BH1994 protein n=2 Tax=Bacillus halodurans RepID... 188 3e-46 UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID... 188 4e-46 UniRef50_B4WNM1 Purine catabolism regulatory protein-like family... 187 4e-46 UniRef50_UPI0001C3208F transcriptional regulator, CdaR n=1 Tax=C... 187 9e-46 UniRef50_C7QE98 Transcriptional regulator, PucR family n=1 Tax=C... 186 1e-45 UniRef50_C7N2C1 Putative uncharacterized protein n=1 Tax=Slackia... 186 1e-45 UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 186 1e-45 UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family ... 186 2e-45 UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=T... 185 2e-45 UniRef50_UPI0001C423CB hypothetical protein BpOF4_15855 n=1 Tax=... 185 2e-45 UniRef50_A8FAN6 Putative uncharacterized protein n=2 Tax=Bacillu... 185 2e-45 UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Ente... 185 2e-45 UniRef50_A0R6B7 GAF domain protein, putative n=1 Tax=Mycobacteri... 185 3e-45 UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n... 185 3e-45 UniRef50_A4FJC5 Transcriptional regulator n=1 Tax=Saccharopolysp... 184 4e-45 UniRef50_B0P9V1 Putative uncharacterized protein n=1 Tax=Anaerot... 184 5e-45 UniRef50_A0LVE5 Purine catabolism PurC domain protein n=1 Tax=Ac... 184 5e-45 UniRef50_C0Z511 Putative transcriptional regulator n=1 Tax=Brevi... 184 6e-45 UniRef50_C0CN88 Putative uncharacterized protein n=1 Tax=Blautia... 183 9e-45 UniRef50_C9M8Q2 Putative transcriptional regulator, CdaR n=1 Tax... 182 1e-44 UniRef50_C1TQL7 Putative uncharacterized protein n=1 Tax=Dethios... 182 1e-44 UniRef50_A6CKX8 Putative uncharacterized protein n=1 Tax=Bacillu... 182 2e-44 UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenuli... 182 2e-44 UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5... 182 2e-44 UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoan... 182 2e-44 UniRef50_C6D273 Transcriptional regulator, PucR family n=1 Tax=P... 182 3e-44 UniRef50_C6PR88 Putative transcriptional regulator, PucR family ... 181 3e-44 UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=C... 181 4e-44 UniRef50_Q97J60 Possible transcriptional regulator from leucine-... 180 5e-44 UniRef50_Q5WAP5 Transcriptional regulator n=1 Tax=Bacillus claus... 180 8e-44 UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1... 180 8e-44 UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoan... 180 8e-44 UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaeros... 180 8e-44 UniRef50_Q0B7J6 Putative uncharacterized protein n=3 Tax=Proteob... 180 9e-44 UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sangu... 179 2e-43 UniRef50_A1SGR6 Putative uncharacterized protein n=1 Tax=Nocardi... 179 2e-43 UniRef50_A1R5V9 Putative uncharacterized protein n=1 Tax=Arthrob... 179 2e-43 UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 178 2e-43 UniRef50_D2AXV2 Putative transcriptional regulator, PucR family ... 178 3e-43 UniRef50_C0XJA2 Putative uncharacterized protein n=2 Tax=Lactoba... 178 3e-43 UniRef50_C1B780 Putative CdaR family transcriptional regulator n... 178 4e-43 UniRef50_B8FTD6 Transcriptional regulator, CdaR n=3 Tax=Desulfit... 177 6e-43 UniRef50_C8X9X0 Transcriptional regulator, CdaR n=1 Tax=Nakamure... 177 6e-43 UniRef50_C3JVB9 DNA-binding protein n=2 Tax=Rhodococcus erythrop... 177 7e-43 UniRef50_Q46PC8 Transcriptional regulator, CdaR family n=1 Tax=R... 176 1e-42 UniRef50_C3JW82 Transcriptional regulator n=3 Tax=Rhodococcus Re... 176 1e-42 UniRef50_C0CYS7 Putative uncharacterized protein n=1 Tax=Clostri... 176 1e-42 UniRef50_C1BDR7 Putative CdaR family transcriptional regulator n... 175 2e-42 UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clo... 175 3e-42 UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevi... 175 3e-42 UniRef50_A1SPN8 Transcriptional regulator, CdaR family n=1 Tax=N... 174 4e-42 UniRef50_A8VR74 Transcriptional regulator, CdaR n=1 Tax=Bacillus... 174 4e-42 UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfit... 174 5e-42 UniRef50_C9S158 Transcriptional regulator, PucR family n=7 Tax=G... 174 6e-42 UniRef50_C7MYB4 Transcriptional regulator, CdaR family n=2 Tax=A... 173 1e-41 UniRef50_C8XKF3 Putative transcriptional regulator, PucR family ... 173 1e-41 UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerob... 172 2e-41 UniRef50_Q3YB12 Putative regulator n=1 Tax=Geobacillus stearothe... 172 2e-41 UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 ... 172 2e-41 UniRef50_A9CLI8 Putative uncharacterized protein n=1 Tax=Agrobac... 172 2e-41 UniRef50_A2SP17 Transcriptional regulator, CdaR family n=1 Tax=M... 172 3e-41 UniRef50_Q0SAZ0 Probable carbohydrate diacid regulator n=1 Tax=R... 172 3e-41 UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=C... 172 3e-41 UniRef50_C3JF01 Transcriptional regulator n=2 Tax=Rhodococcus er... 172 3e-41 UniRef50_C1YR51 Transcriptional regulator, CdaR family n=10 Tax=... 172 3e-41 UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=B... 172 3e-41 UniRef50_B7CD11 Putative uncharacterized protein n=1 Tax=Eubacte... 171 4e-41 UniRef50_A8RIM5 Putative uncharacterized protein n=1 Tax=Clostri... 171 4e-41 UniRef50_D2Q1Z0 Putative transcriptional regulator, PucR family ... 171 4e-41 UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=A... 171 5e-41 UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kl... 171 5e-41 UniRef50_B2A0Y4 Putative transcriptional regulator, PucR family ... 171 5e-41 UniRef50_C0B530 Putative uncharacterized protein n=1 Tax=Coproco... 171 5e-41 UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus Re... 170 6e-41 UniRef50_Q5WM17 Regulator of polyketide synthase expression n=1 ... 170 6e-41 UniRef50_A8WDN0 Putative regulatory protein n=1 Tax=Streptomyces... 170 6e-41 UniRef50_B4BLE6 Transcriptional regulator, PucR family n=2 Tax=G... 170 7e-41 UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=C... 170 8e-41 UniRef50_A8SJR4 Putative uncharacterized protein n=1 Tax=Parvimo... 170 9e-41 UniRef50_C7D4Q9 Predicted protein n=22 Tax=Enterococcus faecalis... 170 9e-41 UniRef50_B6FKY8 Putative uncharacterized protein n=1 Tax=Clostri... 170 9e-41 UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces s... 170 1e-40 UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=La... 170 1e-40 UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliph... 170 1e-40 UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostri... 168 2e-40 UniRef50_B8FZU5 Putative transcriptional regulator, PucR family ... 168 2e-40 UniRef50_UPI0001B55256 transcriptional regulator, CdaR n=1 Tax=S... 168 3e-40 UniRef50_A7B5U0 Putative uncharacterized protein n=5 Tax=cellula... 168 3e-40 UniRef50_C6L8W8 Putative uncharacterized protein n=1 Tax=Bryante... 168 3e-40 UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus... 168 3e-40 UniRef50_B4BLD3 Transcriptional regulator, PucR family n=3 Tax=B... 168 4e-40 UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostri... 168 4e-40 UniRef50_C1BB10 Putative CdaR family transcriptional regulator n... 168 4e-40 UniRef50_A6CS53 Putative uncharacterized protein n=1 Tax=Bacillu... 167 5e-40 UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmat... 167 6e-40 UniRef50_D1CBY0 Transcriptional regulator, CdaR n=1 Tax=Thermoba... 167 7e-40 UniRef50_D2LUM4 Putative transcriptional regulator, PucR family ... 167 7e-40 Sequences not found previously or not previously below threshold: >UniRef50_P37047 Carbohydrate diacid regulator n=115 Tax=Gammaproteobacteria RepID=CDAR_ECOLI Length = 385 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 385/385 (100%), Positives = 385/385 (100%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV Sbjct: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR Sbjct: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS Sbjct: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE Sbjct: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG Sbjct: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE Sbjct: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 LTGLDLGNFDDRLLLYVALQLDEER Sbjct: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 >UniRef50_A7JY33 Sugar diacid utilization regulator SdaR n=38 Tax=Vibrio RepID=A7JY33_VIBSE Length = 380 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 162/380 (42%), Positives = 240/380 (63%), Gaps = 3/380 (0%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 LD +AQ IV RTM II N+NVM++ G IIGSGD +R+G++H+GA+L L+ G ++++ Sbjct: 3 ILDHSLAQQIVDRTMSIIGHNVNVMNSAGIIIGSGDPKRVGQVHDGAVLALNHGDSLELN 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L GV+ GIN+ L+L G++VG++G+TGEPE +R + +LV MTAE+ +EQ+ L+ Sbjct: 63 EQQCLTLQGVKPGINMLLKLHGDVVGIVGVTGEPEKIRDFAKLVKMTAELTIEQAALVEK 122 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D R REE ++ I + L +WA RL ID+ QPRV ++EV + +M Sbjct: 123 FQWDRRHREEFILAWINGKLTDEELKDWAMRLSIDVTQPRVATVIEVSTP--SASKSMKS 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ + L PERNNLVAIVS+ E+VVLKP +S +WD++ +R+++L++R+ ++ Sbjct: 181 VRNIVELLEYPERNNLVAIVSVNEIVVLKPC-HSAKQWDSQIESERIDKLMSRLSDHDSH 239 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 F ++LG F P +A SY++AK + +GKQ PE R Y + +L LPVLL L WQ Sbjct: 240 TFHIALGQLFNEPKDVALSYQSAKQVLAIGKQFYPEKRKYLFDELRLPVLLAPLADIWQG 299 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 ++ + RLK D +G L +TL A F N SK LFIHRNTL YRL +I+E+TGL Sbjct: 300 EQIIDGVKRLKEKDKSGQLLKTLDALFECNGNVTECSKMLFIHRNTLRYRLEKITEITGL 359 Query: 365 DLGNFDDRLLLYVALQLDEE 384 NF LY+A +L + Sbjct: 360 PTTNFVGLAELYIATRLSKM 379 >UniRef50_Q07ZT4 Transcriptional regulator, CdaR family n=8 Tax=Shewanella RepID=Q07ZT4_SHEFN Length = 413 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 178/383 (46%), Positives = 249/383 (65%), Gaps = 1/383 (0%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + +DT +A IV RTM+II NINVM+A+ I+GSGD +RIG +HEGALL +SQ R V Sbjct: 28 FMFQIDTLIAAKIVDRTMKIIGHNINVMNAQAVILGSGDIDRIGTVHEGALLAISQNRNV 87 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 +I A+A +LHGV+ G+NLPL G++VGVIG+TGEP+ L YGEL+ MTAEM++EQ+ L Sbjct: 88 EISQAIASNLHGVKPGLNLPLHYHGQVVGVIGITGEPDTLSHYGELLKMTAEMIVEQANL 147 Query: 122 MHLLAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L +R EE + LI E++ P+L +WA +LGIDL+ PRV AI+E+DS Sbjct: 148 QEQLQWQNRQTEEFISQLIHANEQDLPSLQQWALQLGIDLSVPRVAAIIELDSNNPLYQQ 207 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L+Q+ L P R+NL+A+ SLT++V+LKPA ++D E +R+ +L+ R+ Sbjct: 208 DNQALKQVLYLLQNPVRDNLIAMTSLTQLVILKPAFLDGKQFDPELENQRINKLLKRLPA 267 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 QL +SLG+YF G I+ SYRTAK T+ +GK+ P Y YQD L VLL LR Sbjct: 268 NMQLSLHISLGHYFGGELGISYSYRTAKETLDIGKKLHPTKTKYLYQDYSLQVLLSGLRH 327 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 W+ N LA P +L +DNN L++TLAA+ H A + +LFIHRNTL YRL++I Sbjct: 328 HWRGNALAGPYLKLIEVDNNQQLQKTLAAYLDHMGDIQACANSLFIHRNTLRYRLDKIQT 387 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 +T +DL +F+ L LY+ + + Sbjct: 388 ITNIDLRSFNGLLSLYLGQLIHQ 410 >UniRef50_A4Y5G5 Transcriptional regulator, CdaR family n=12 Tax=Gammaproteobacteria RepID=A4Y5G5_SHEPC Length = 413 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 168/406 (41%), Positives = 248/406 (61%), Gaps = 27/406 (6%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD+ +A+ IV+RTM+II NINVM+ +G I+GSGD +RIG +HEGALL ++Q R V+I Sbjct: 2 YLLDSAIAKQIVSRTMKIIGHNINVMNGQGMILGSGDPKRIGSIHEGALLAIAQNRNVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 VA LHGV+ GINLPL +G+I+GV+G+TG+P L YGEL+ MTAEM++EQ+ L Sbjct: 62 SQEVAASLHGVKPGINLPLHYQGQIIGVVGITGDPNELTHYGELLKMTAEMIVEQANLQD 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD---- 179 L ++R REE ++ LI+AE + L WA++L ID++ PRV AI+E+ + Sbjct: 122 KLQWENRQREEFILQLIKAETDDRQLHRWAKQLDIDMSMPRVAAIIEISEKSTPIKIPKR 181 Query: 180 -----------------------SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 L+Q+ + L P+R NL+A+ S++++V+LKPA Sbjct: 182 PSDPLAIDLADTLQVNASDDRNHRVGETLKQVLHLLQYPDRGNLIAMTSMSQLVILKPAF 241 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 +WD E +R+++L+ R+ L F+++LG++F G IARSY+TA T+ +GKQ Sbjct: 242 LDGKQWDPELENQRIDRLLQRLPAQMNLNFKIALGHFFPENGGIARSYQTALETLALGKQ 301 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQ 336 PE Y ++D L VLL L+ DW+ LA P +L D NG LR+TLAA+ H Sbjct: 302 LNPEGNKYLFEDYSLQVLLSGLKYDWRGQALAMPYQQLAKADKNGQLRKTLAAYITHFGD 361 Query: 337 PLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 + LFIHRNTL YRL++I ++T D+ + L LY+ +D Sbjct: 362 AQQCANTLFIHRNTLRYRLDKIQQITQADIQSLHGLLSLYLGQLID 407 >UniRef50_B5ZI25 Transcriptional regulator, CdaR n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZI25_GLUDA Length = 400 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 170/381 (44%), Positives = 235/381 (61%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M +D +AQ IV R+M +I NINVMD+ G II SGD R+G++H+GAL V+++ Sbjct: 1 MPSVAIDPALAQAIVDRSMTVIACNINVMDSHGVIIASGDPARLGQVHDGALRVMARQEA 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+I+ A R G+NLPLRL G +VG +GLTG P +R Y ELV M AE MLEQ++ Sbjct: 61 VEIEPRAAPPDGDARPGVNLPLRLGGAVVGCVGLTGVPGTIRPYAELVRMAAETMLEQAQ 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L++++RLREELV++LI+ E PAL A RLGIDL RV AIVE+ + Sbjct: 121 QSRTLSRETRLREELVLSLIRDEAPIPALAASAARLGIDLRPARVAAIVEILPRTQDGIA 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + ++ +L L P++ NLVA +SLTE+ VL PAL + G WD + R+R ++L+ R + Sbjct: 181 LVGDMHRLGTLLGAPDQGNLVAPLSLTEIAVLTPALTARGTWDPDRLRERAQRLLARAQT 240 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 L R++LG GPG +ARSY+ A+ T+ G++ P R FY+D+ LPVLLD Sbjct: 241 ATGLDLRLALGRPVEGPGGMARSYQVARATLAAGRRLHPARRALFYEDMRLPVLLDDPLR 300 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 DW+ EL PL L + L RTL W H +Q AT+ AL +HRN+L+YRL +I Sbjct: 301 DWRTQELRAPLRPLTDAARHAPLLRTLRTWLDHGMQQRATAAALGLHRNSLDYRLRQIER 360 Query: 361 LTGLDLGNFDDRLLLYVALQL 381 L G+DL D + LY+AL L Sbjct: 361 LCGVDLTRSADIVALYLALHL 381 >UniRef50_Q2RG03 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RG03_MOOTA Length = 390 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 106/391 (27%), Positives = 188/391 (48%), Gaps = 13/391 (3%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M+ L +AQ IV + M + NIN+MDA+GRII SG+ R+GE H A S+G Sbjct: 1 MSQLMLSANLAQKIVKKIMGTLGKNINIMDAQGRIIASGNPRRVGEKHRAAFEASSKGEP 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + + + QG+N+P+R +G +VGVIG+TG P+ + Y ELV AEMM+E++ Sbjct: 61 IIVRENDMNMFGVKYQGVNMPIRFKGTVVGVIGVTGNPDEILSYVELVRDFAEMMIEEAV 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIV---EVDSGQ 175 L +++ E + L+ E + + + A+ GID + R V + ++ G Sbjct: 121 LREQFYLETQALESFIQKLVAGETKLSEEEIIDKAELFGIDYHISRSVCLFLTYPLNDGN 180 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 V+ + + A ++ + ++L G D ++ L Sbjct: 181 NMVEQNEHKFLSILQASFKMADGEILVRGGAGKFILL-----KKGVKDIPTFLAQLNTLC 235 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 ++ +L V +G++ + +SY A + +G+Q P+ + + Y DL + ++ Sbjct: 236 DKLTIESKLAVSVGIGSFGPNLAHVIKSYEEALKAVTIGRQFYPQLKVFNYDDLKVERVI 295 Query: 296 DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 + + N + L L D ++ L T+ A+F++++ T+KAL +HRNT+ Y Sbjct: 296 WEVPPAKRKNFIDEILGALIEEDTFHHRQLYSTMEAFFKNDLDIERTAKALHVHRNTIIY 355 Query: 354 RLNRISELTGLDLG-NFDDRLLLYVALQLDE 383 RL +I E TG D +F + L L +A + Sbjct: 356 RLKKIKECTGYDPRGSFRELLHLGMAYLFYK 386 >UniRef50_Q7MHW7 Sugar diacid utilization regulator n=18 Tax=Gammaproteobacteria RepID=Q7MHW7_VIBVY Length = 422 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 164/385 (42%), Positives = 244/385 (63%), Gaps = 7/385 (1%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 ++ L+ +A+ IV RTM+II ++NVMD +GRIIGSGD R+ + HEGA+L +++ RV Sbjct: 22 LSSMKLNETIARQIVERTMKIIPYSVNVMDDQGRIIGSGDPSRLQQKHEGAVLAITECRV 81 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+ID A A HL GV+ GINLP+ +++GVIG++G P+ ++ YGELV MTAE+++EQ+ Sbjct: 82 VEIDKATASHLKGVKPGINLPILFLEQVIGVIGVSGAPDEVKHYGELVKMTAELIVEQAA 141 Query: 121 LMHLLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 LM + + R REELV+ LI N L A+RLG++L++PR+ A+V+V Sbjct: 142 LMSQVQWNKRHREELVLQLISGATLNDNQLNSIAERLGLNLSEPRIAAVVKV-FPDKQTS 200 Query: 180 SAMAELQQLQNALTTPERNNLVAI--VSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 ++ LQQ+ + L PER+NLV I VS E+VVLKP + W E KR+ QL+ R Sbjct: 201 LSLEHLQQIVHLLEYPERDNLVGILSVSNNEVVVLKPISLTDNGWSKEVETKRINQLLKR 260 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + G +++LG+YF G +A+S+ TAK TM + +FYQD LPVL+ Sbjct: 261 VSKEGNFSIKIALGDYFEGLAGLAQSFETAKLTMQLMA--EQSGTVFFYQDHKLPVLMSD 318 Query: 298 -LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 L W+A +L PL +L+ D+ G+L +TL A+F N T +AL IHRNTL YR+ Sbjct: 319 LLSQPWKAEQLQAPLLKLQKKDSKGVLLKTLTAYFAQNCDACRTCQALHIHRNTLRYRIE 378 Query: 357 RISELTGLDLGNFDDRLLLYVALQL 381 +I ++T L+ N ++ LY+AL+L Sbjct: 379 KIEDITSLNFNNLNNTFQLYIALEL 403 >UniRef50_Q2B3Q7 Hypothetical Sugar diacid utilization regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3Q7_9BACI Length = 373 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 138/367 (37%), Positives = 196/367 (53%), Gaps = 12/367 (3%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD +AQ+IV RTM+II NINVM+ +G IIGSGD RI +HEGA+ V+ GR +I + Sbjct: 4 LDGALAQEIVDRTMQIIGRNINVMNEKGVIIGSGDEARIQSVHEGAVQVIGAGRGFEITE 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A A L+GV+ GINLP+ + I+GVIG+TGEPE +R YGELV M AEM+L+Q+ LM + Sbjct: 64 AEAGRLNGVKAGINLPITFQDHIIGVIGITGEPEEIRSYGELVRMAAEMILQQAVLMDEM 123 Query: 126 AQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 D RL+EEL L+ EN P E RLGIDL+ PR ++ D Sbjct: 124 QWDERLKEELTSQLLSGSENLDPLYFERVNRLGIDLDIPRTAIVIAADEQTKSYKWIRDR 183 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L++ + +++ +++LK + WD ++ ++ + L Sbjct: 184 LEKED-----------LYVMNPGYIILLKKVITKREGWDHGQTMNQLGDWLSALAGSQGL 232 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + ++G Y G ++RSYR A T+ G++ P+ YFY+D LPV + A Sbjct: 233 PCQAAIGQYHPGLEGLSRSYREAVHTLEAGRKLDPQQALYFYEDYKLPVFVARAAELGIA 292 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 A L D G L+ TL + N + + L+IHRNTL YRL RI ELTG Sbjct: 293 GAFQHHAANLNQHDKKGELQETLRIYIEENGDSSSAASRLYIHRNTLRYRLERIKELTGK 352 Query: 365 DLGNFDD 371 D + D Sbjct: 353 DPRSIKD 359 >UniRef50_Q3BM11 Sugar diacid utilization regulator n=17 Tax=Gammaproteobacteria RepID=Q3BM11_XANC5 Length = 396 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 195/381 (51%), Positives = 260/381 (68%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD +AQ IV R M IID N+NVMD G II SG+ RIG+LHEGALLVLS+ V+I Sbjct: 2 LTLDRTLAQSIVDRAMTIIDGNVNVMDHSGVIIASGEPARIGQLHEGALLVLSRQGRVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D A+A+ L VR G+NLPL EG IVG +GLTG+P+ + + ELV M AE MLEQ+ L+ Sbjct: 62 DAALAQQLDAVRPGVNLPLIAEGRIVGCVGLTGDPQRIGQQAELVRMAAEAMLEQAGLLR 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 LLA+D+RLREE+ + LI+ + TPAL WA+RLGI L+ PRV A++EV+S L +D+ + Sbjct: 122 LLARDARLREEVTLGLIRPDGPTPALAGWAERLGIALDLPRVAAVIEVESDSLDLDAMLV 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 ELQ+L L+TPER NL+A +L E+VVLKPAL+ G WD + R+R L+ RM+ + Sbjct: 182 ELQRLHTLLSTPERGNLIAATALNELVVLKPALDRRGHWDVAEQRRRAHSLLERMRASSR 241 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 LR R++LG YF +A S++ A+TTM +GK R P + +FY D LPVL+D LR WQ Sbjct: 242 LRIRLALGQYFPQSNGLALSHQIARTTMRIGKARTPYADAFFYDDYRLPVLVDDLRQAWQ 301 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A EL +PL L D L +TL+ WF ++ T+KAL IHRNTL+YR+ RI EL Sbjct: 302 AEELRKPLQALLAQDRRSQLLKTLSVWFGAGMRMAPTAKALGIHRNTLDYRMQRIQELCA 361 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 +DLGN DD + LY+AL++ + Sbjct: 362 VDLGNTDDCMRLYLALRMRHD 382 >UniRef50_B5R4K1 Conserved regulatory protein n=55 Tax=Enterobacteriaceae RepID=B5R4K1_SALEP Length = 395 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 145/384 (37%), Positives = 206/384 (53%), Gaps = 8/384 (2%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + +L A+ IV R M+II ++NVMD G II SG+ R+ + HEGA+L L + R Sbjct: 4 LRKHYLKGYTARQIVQRAMKIIPYSVNVMDEHGVIIASGEPSRLRQRHEGAILALKENRF 63 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V+ID A A L GVR GINLP+ +++GV+G+TGEPE +R Y ELV M AE+++E Sbjct: 64 VEIDSATANQLKGVRSGINLPISFHEQLIGVVGITGEPEEVRAYAELVKMAAELVIEHMV 123 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L+ D R REEL+ LI E +T +L A LGIDL PRVV I+E+ Sbjct: 124 LIEQRQWDKRYREELINQLILRENSTESLRSMAAYLGIDLAVPRVVLIIELSQPD----- 178 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L+ + + RN+LV E++++KP G+W+ + Q+ Sbjct: 179 -REALRNVMDYFENHARNHLVTFTEFNELIIIKPITLKEGKWNTRQEMGEL-QIFKSWAA 236 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 R+ +G YF G + RS TA+ T + K++ S+ FY D LP LL L Sbjct: 237 SSGFS-RILVGGYFAGETGLHRSLLTARATQAMAKRQKLRSQYIFYHDHALPALLSGLSE 295 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 WQ EL+R +L D G+L++TL WF HN T+KAL IH NTL YRL R + Sbjct: 296 SWQVQELSRLWLQLAQHDAKGVLQQTLRTWFEHNCDLTQTAKALHIHVNTLRYRLQRCED 355 Query: 361 LTGLDLGNFDDRLLLYVALQLDEE 384 +T + + L LY+ ++L E Sbjct: 356 ITHIKINELKSTLWLYIGMELQAE 379 >UniRef50_C4ZKY7 Transcriptional regulator, CdaR n=1 Tax=Thauera sp. MZ1T RepID=C4ZKY7_THASP Length = 384 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 181/379 (47%), Positives = 247/379 (65%), Gaps = 5/379 (1%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD +AQ IV R M+I+ TN+NVMD RG II SGDR RIG HEGALLVL+QGR V++ Sbjct: 2 FLLDASLAQSIVDRAMQILRTNVNVMDERGLIIASGDRARIGSRHEGALLVLAQGRAVEV 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D AVA+ LH R GINLPLR EG +VGV+GL+GEP+ +R+ ELV + AE MLEQ++ M Sbjct: 62 DAAVAQRLHDTRPGINLPLRAEGRVVGVVGLSGEPDAVRQQAELVRLAAETMLEQAQWMQ 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +LA+D RLREELV+ LI L +WA RLG+DL +P V ++E+ L D+ +A Sbjct: 122 MLARDQRLREELVLQLIGVSPPGAGLDDWASRLGVDLARPCVALLIEIADASLAADAVLA 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 Q+L+ L E A V+L E+ VL P + D R R++ L R+ G Sbjct: 182 AQQRLRRLLAEQEPGLACAPVTLRELAVLMPLPAAES-----DLRSRLQALHGRLGGEGS 236 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + ++LG F G +ARS+++A+ T+ G++ P++ + Y +L LPVLL L W+ Sbjct: 237 GQPCLALGGRFGGDDGLARSWQSARATLQAGRRHRPQAAIHCYDELTLPVLLAGLGEGWR 296 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 A+EL RPL RL D +G LR TLAAWF H+++ ++ AL +HRNTLEYRL RI E+TG Sbjct: 297 ADELRRPLRRLAQQDRDGQLRCTLAAWFAHDMKAAPSAGALHVHRNTLEYRLRRIGEITG 356 Query: 364 LDLGNFDDRLLLYVALQLD 382 LDL +D LLL++ L+LD Sbjct: 357 LDLARLNDCLLLFIGLELD 375 >UniRef50_Q65PK8 Putative sugar diacid recognition protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65PK8_BACLD Length = 372 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 135/378 (35%), Positives = 190/378 (50%), Gaps = 19/378 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +L ++A++IV RTM II NIN+MD G II SGDR RIG+ H GA L+ +V+ I Sbjct: 3 YLSKELAEEIVERTMSIIRHNINMMDENGVIIASGDRSRIGDEHAGAKDALAAEKVISIT 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 L G + G+NLP+ EI+GVIG+TG P + +YGELV M AE+ +EQ+ L Sbjct: 63 PEECSALTGTKPGVNLPIVFHDEIIGVIGITGPPSEVSRYGELVKMAAELTVEQAFLTKQ 122 Query: 125 LAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L D RLREE V+ +IQ + E A+RL I L+ R + E+ S D A Sbjct: 123 LTWDQRLREETVIQMIQGTDLASLDFFERAERLNIPLDGQRTCLVFELPSA----DMKPA 178 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +++L+ LT +L A +SL E+ V+ + R D +++ K Sbjct: 179 FIKKLEKHLTA---KDLYANISLKEVAVILAGAPTKSRSD---LFSAWNGWLSQWK---- 228 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R +LG + SY++AK T+ + + Y Y++ +PVLL + Q Sbjct: 229 -TVRGALGEQADQLQQLPFSYQSAKQTLKIAE---NNCSLYDYREFAIPVLLSKIEHPDQ 284 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 RL D G L TL + N + TS LFIHRNTL YRL +I TG Sbjct: 285 EIHFQNIWDRLSQADQKGELTHTLLCYIEENGEIGETSSRLFIHRNTLNYRLRKIELATG 344 Query: 364 LDLGNFDDRLLLYVALQL 381 + FDD LY A+ L Sbjct: 345 CNPKRFDDLFKLYTAITL 362 >UniRef50_C9NXK6 Sugar diacid utilization regulator SdaR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXK6_9VIBR Length = 367 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 123/377 (32%), Positives = 201/377 (53%), Gaps = 14/377 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 LD ++AQ IV RTM II NINVM+ G ++ SG+ RIG+ H+GALL LS+ V++ Sbjct: 1 MLDAQLAQRIVDRTMPIIGYNINVMNNAGLVVASGESSRIGQTHDGALLALSRKTSVEVT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L GV+ G+NL L+ + I+GV+G+TGEP +R ELV MTAE++++Q+ L+ Sbjct: 61 SEDCKLLSGVKPGVNLLLKHKNAILGVVGITGEPNEIRGVAELVAMTAELIIDQADLLEK 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + +D R R+E ++ + + + + A+++ ++ + + +VE+ + + Sbjct: 121 VQRDRRYRDEFILACLTGRLSPSEMRDGAEQISVNPSDSWELLLVEMPTQDSSTAT---- 176 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L L ++L A +S +V+ P V + + +++ Sbjct: 177 ---LTERLYQKPGHHLCAHLSARHLVIFVPTEQPLS-------ADSVNEWLHWLEQTPCR 226 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +VS G + +Y +A M +GK P++ Y D LPVLL L G WQ Sbjct: 227 NLKVSTGKFAHRLEEWQTAYNSALQVMKIGKAARPKNTVYLLDDYQLPVLLAPLHGTWQG 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 +L++ A L D +G L TL A+F N T+ LFIHRNTL+YRL++I+E+TG Sbjct: 287 EQLSQMTATLVEHDKSGQLIATLEAYFDANGSANETASKLFIHRNTLKYRLDKITEITGF 346 Query: 365 DLGNFDDRLLLYVALQL 381 + +F LY+A+QL Sbjct: 347 ETTDFSHMAQLYLAIQL 363 >UniRef50_A7JU45 Sugar diacid utilization transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JU45_PASHA Length = 364 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 114/376 (30%), Positives = 190/376 (50%), Gaps = 17/376 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+ +A IV RTM+II ++NVMD+ G II SGD RIG+ H GA++ L + V+I Sbjct: 1 MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQRHTGAVIALRNDQAVEI 60 Query: 64 DDAVARHL-HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D+ +A+ V+ GINLPL G +GV+G++G+P+ +R+Y +LV M AE++++Q+ + Sbjct: 61 DENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQYAQLVKMAAELIMQQAFEL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 R REE V L++ +T + + A G D +P V ++++ S Sbjct: 121 EQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAKPLSVMVIKIHG------STA 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +LQ+L + + L A++ L ++ +L N + + + ++ Sbjct: 175 EKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNE---------KSLIRNALNKL-NDP 224 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + F+ +G SY+TA T+ +Q + ++D LP LL S W Sbjct: 225 DISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPALLHSFSHSW 284 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +A L P L D +L ++L +F N +K LFIH NTL YRL +I ++T Sbjct: 285 EAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLRYRLEKIEQIT 344 Query: 363 GLDLGNFDDRLLLYVA 378 GL N + + +LY+ Sbjct: 345 GLSFNNIEQKFVLYLG 360 >UniRef50_P44509 Uncharacterized protein HI0093 n=19 Tax=Pasteurellaceae RepID=Y093_HAEIN Length = 368 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 133/380 (35%), Positives = 210/380 (55%), Gaps = 14/380 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD A+ IV R M+II ++NVMD G II SG+ R+ + H GA+L L + RVV+I Sbjct: 1 MQLDKYTAKKIVKRAMKIIHHSVNVMDHDGVIIASGNSTRLNQRHTGAVLALRENRVVEI 60 Query: 64 DDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D A+A+ + + GINLP+ G+ +GV+G++GEP +++Y ELV MTAE+++EQ L+ Sbjct: 61 DQALAQKWNFEAQPGINLPIHYLGKNIGVVGISGEPTQVKQYAELVKMTAELIVEQQALL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + R +EE ++ L+ N + + A+ DLN+ RVV ++++ ++ A+ Sbjct: 121 EQESWHRRYKEEFILQLLHCNLNWKEMEQQAKFFSFDLNKSRVVVLIKL------LNPAL 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 LQ L N L E VAI+SL ++VVLK NS +++ L+ Sbjct: 175 DNLQNLINYLEQSEFAQDVAILSLDQVVVLKTWQNSTV------LSAQMKTLLPADYSKQ 228 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + V + S+++A++T+ G + P Y + + LPVLL L W Sbjct: 229 DYKIAVGACLNLPLFEQLPLSFQSAQSTLSYGLKHHPRKGIYVFDEHRLPVLLAGLSHSW 288 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 Q NEL +PL+ L + + N +L +TL +F N T++ LF+H NTL YRLN+I ++T Sbjct: 289 QGNELIKPLSPLFS-EENAILYKTLQQYFLSNCDLYLTAEKLFVHPNTLRYRLNKIEQIT 347 Query: 363 GLDLGNFDDRLLLYVALQLD 382 GL DD+L LY+ L+ Sbjct: 348 GLFFNKIDDKLTLYLGTLLE 367 >UniRef50_B9CXD4 Sugar diacid utilization transcriptional regulator n=2 Tax=Actinobacillus minor RepID=B9CXD4_9PAST Length = 369 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 115/381 (30%), Positives = 200/381 (52%), Gaps = 13/381 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD +AQ IV R M+II ++NVMD G II SGD R+G+ H GA+ VL + ++++I Sbjct: 1 MKLDNILAQSIVKRAMQIIPYSVNVMDENGVIIASGDICRLGQRHLGAVQVLRKNQIIEI 60 Query: 64 DDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 D+ + + H V+QGIN+P+ +GVIG++G+PE +R+Y +LV M AE+++EQ+ + Sbjct: 61 DEQLEKQWHFEVKQGINVPITYLNNNIGVIGISGKPELVREYAKLVKMAAELIVEQAAQL 120 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 SR +EE V+ + +A + + + G+ + P + ++++ V+S Sbjct: 121 EKERWQSRYKEEFVLGVAKATLTPEQIVQQSTFFGLRYDVPYIAVLIKL------VESTA 174 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +LQ L L+ AIV L ++V+ +P + + + E+ Sbjct: 175 EKLQLLLTYLSHYHPKVATAIVDLQKIVIFQPLDQHEILKKTKFWKSYLP------PEFA 228 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + ++ +GN + I SY+ A T++ ++ + F+++ +P LL W Sbjct: 229 EESCQIIVGNEVSSLIDIQYSYQNAWQTLLYAEKMHLRKQLLFFEEYRMPALLADFAQSW 288 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 QA L +P+ +L D +L ++L +F N +K LFIH NTL YRL RI+++T Sbjct: 289 QAKILFKPIYQLIEQDKKWVLMKSLQQYFFSNCDLDHAAKKLFIHPNTLRYRLERITQIT 348 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 L +D+ +LY+A L Sbjct: 349 SLSFNKIEDKSILYLATLLIR 369 >UniRef50_C5B989 Carbohydrate diacid regulator n=2 Tax=Edwardsiella RepID=C5B989_EDWI9 Length = 373 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 150/382 (39%), Positives = 219/382 (57%), Gaps = 10/382 (2%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G L +A+ IV R M II ++NVMDARG II SGD R+ + HEGA+LVL++ R+ Sbjct: 1 MDGSDLSEAVARQIVHRAMEIIGHSVNVMDARGVIIASGDTARLHQRHEGAVLVLAENRL 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ++ID+A AR L GVR GINLP+ +VGV+G++G P +R YGELV M AE++LEQ+ Sbjct: 61 IEIDEAAARQLRGVRPGINLPITFHRRLVGVVGISGAPGEVRAYGELVRMAAELILEQAA 120 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L+ + R RE LV LI E + L A LG+D+ QPR+ + + D+ Sbjct: 121 LLEQSQWEKRYRETLVQQLIADERDEAQLAATAAYLGVDVAQPRIALLFTLQ------DA 174 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L+ L ALT R L+ + ++V+L P + G ++ R+ V QL + Sbjct: 175 HHETLRALLEALTALHREALIGVQGFAQLVMLLPCGD--GVMESPALRRTVRQLTRGIAA 232 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + +G F+G G++ RSYR+A+ + ++ +YQD +LP LL+ L G Sbjct: 233 RF--ALHIYVGGAFSGTGAVCRSYRSAQALQALARRHALSGTVIYYQDHVLPTLLEHLAG 290 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 WQA+EL + RL+ D+ G+L RTL +F N + TSK L IH NTL YRL RIS+ Sbjct: 291 SWQADELGQVWRRLQHQDSRGVLCRTLRTFFAQNCELSQTSKLLHIHVNTLRYRLQRISD 350 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 +T L++ + LY+ +QL Sbjct: 351 ITNLNINQLQSVIQLYLGMQLH 372 >UniRef50_A8VU51 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU51_9BACI Length = 388 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 15/389 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L T +A IV I+ + V+D G II + DR RIG HEGA + + G+ I Sbjct: 1 MELLTGVASRIVNEVTEIVREEVIVVDQTGTIIAASDRNRIGNFHEGAKIAVDTGKHFII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 L GV+ G+NLP+ ++G VGVIG+TGEP + ++G+L+ E++++++ Sbjct: 61 RKRDVPKLKGVKAGLNLPIMIDGSAVGVIGITGEPSKVIQFGQLIQRMTELIIKEAYSSE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 LL R E V + ++ E + LGI L++P+ ++++ L A Sbjct: 121 LLDSKHRGYETFVYEWVNIQDVDFEFRERGEILGIRLDRPKCCILIDLMEKHLTHQDGSA 180 Query: 184 ELQQLQNALTTPER-------NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 + +T R + V +V+K + DA+ + ++Q++ Sbjct: 181 LKRATDQTVTDYLRLAFEQNPQDFVVPWGAGRFMVVK--DMNEPVQDAKLIERELKQILQ 238 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + Q + + +G P + RSY+ AK + + + FY +L L + L Sbjct: 239 EIDRQFQFQAQAGVGTVVHVPEELRRSYQEAKRAIS---AKGHSEKVVFYSELSLELALA 295 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + + + + N L TL + HN++ T++AL IH NTL YRL Sbjct: 296 EISTMTRERLIEKVIGSIM---NEKDLMDTLDVFIEHNLRLKPTAEALHIHINTLHYRLK 352 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDEER 385 RISELTG + +D + LY+A+ ++ Sbjct: 353 RISELTGKSVKRTEDIVSLYIAVHFYHDQ 381 >UniRef50_UPI0001C42195 hypothetical protein BpOF4_09330 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42195 Length = 368 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 18/380 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ+IV RT+ II N+NVMD G IIGSGD+ R+ ELH GA+ ++Q V++ Sbjct: 1 MLTRTLAQEIVNRTIDIIGYNVNVMDKDGIIIGSGDQSRLFELHAGAVEAIAQEVEVEVG 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L G + GINLP+ EIVGVIG+TG + +R YG+LV M AE+ L Q+ L Sbjct: 61 EEDLTRLKGTKTGINLPITFNEEIVGVIGITGPLDEIRGYGKLVKMAAELSLSQAFLTAE 120 Query: 125 LAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L D+R +EELV LI+AE E+ A LG+ ++ P V ++ + Sbjct: 121 LQWDTRHKEELVRQLIRAEIEDWNLFKTRADSLGLSISLPCEVICIDTPQTATRYNEERQ 180 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L+ + + V+ P + + + + Sbjct: 181 KY-ALEEHFKEYSS---LTQIQKDRYVLFLPTKKAISKD-------------KLLHIASR 223 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + V G IA SY+ A ++ G+ + R ++Y++LML V L L Sbjct: 224 FKLDVGYGTIAYTLDDIAPSYQKASYSINAGRFKKAGQRIHYYEELMLDVSLYKLSRSTD 283 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 EL L LK D L TL A+ HN + +KALF+HRNT++YRL +I+++T Sbjct: 284 MKELKGILMPLKPGDQANQLLDTLEAYIEHNGEVKQVAKALFVHRNTVQYRLQKIADITK 343 Query: 364 LDLGNFDDRLLLYVALQLDE 383 D + L LYV+L+L++ Sbjct: 344 KDPRVLEQLLELYVSLKLNQ 363 >UniRef50_Q8EML2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EML2_OCEIH Length = 380 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 176/377 (46%), Gaps = 16/377 (4%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 +A I+ +ID I + D G II S + RIG+ HEG+ +V+ + + I +++ Sbjct: 5 HLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLT 64 Query: 69 RHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 L GV+ GINLPL ++GVIG+TGE E ++ +GE+V E+++ ++ + + Sbjct: 65 IDLQGVKTGINLPLFFNKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFE 124 Query: 129 SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 R E ++ +L+Q+ + T L + A+ LG+ L + V I+ ++ + + L Sbjct: 125 HRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSKQVIILVINEIDSTLQKQI--WHYL 182 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 ++ + +++ + + + + + + L + + + + Sbjct: 183 KDLIPE---KDILTRWGNNRLFWMHTLSSIKDQIKPD----FLNTLQKACENHFSIDLNI 235 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 +G+ + RSY A + ++R F+ DL L + L + D + + Sbjct: 236 GVGDTA-SASDLYRSYEEALIAINY---FPDDTRISFHTDLQLELCLQDISDDTKKEYIQ 291 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 R + L L +TL + + T++ALFIH NTL YRL++I + TGLD Sbjct: 292 RTIGTLIEH---NQLLQTLHVFIENESSLQKTAEALFIHINTLHYRLSKIHQFTGLDPKR 348 Query: 369 FDDRLLLYVALQLDEER 385 F D LY+A+ +E Sbjct: 349 FKDLTNLYLAITFLDEH 365 >UniRef50_Q8EMQ7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMQ7_OCEIH Length = 377 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 14/382 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++A IV RTM II NIN+MD G II SG+ RIG+LH+GA+ V+ + R ++ID Sbjct: 3 ILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEID 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + A H + GINLP+ + I+GVIG+TG P+ +R Y +L+ M AE+ LEQ+ L + Sbjct: 63 TSGATHWQSSQSGINLPITFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNE 122 Query: 125 LAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + Q+ ++R+ + N++ E + E A +D+ V I+ L Sbjct: 123 IQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQTTYAVIIIFTP--VLDKKHTEE 180 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + +Q+ L + + + + ++LK + +D L+ + K Sbjct: 181 VEKHIQSWLNHEDEHIRLFT---NQHLILKKEIGYSNPAHIKDI------LVEKHKNSSI 231 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL--RGD 301 +++G+Y TG +SY+ A+ + V K P + Y+DL L +L L Sbjct: 232 PNMTIAVGSYLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKP 291 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 A EL R+ T + L +TL + N + TS LFIHRNTL YRL++I ++ Sbjct: 292 QSAKELTTTYQRILTESDGIQLHQTLQTYIEENGKVSITSDKLFIHRNTLTYRLDKIHQI 351 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG D N + L L +A L + Sbjct: 352 TGKDPRNINHLLELKMASLLYD 373 >UniRef50_B7GLF5 Sugar diacid utilization regulator n=2 Tax=Bacillaceae RepID=B7GLF5_ANOFW Length = 367 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 185/380 (48%), Gaps = 17/380 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A+ IV+ R+ID +I V+ G II S D RIG+ HEGA LV + + I Sbjct: 1 MLSPHLAKKIVSDVRRLIDEDIIVVATNGIIIASTDTTRIGQFHEGAFLVCQEKKKRIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 L GV+ GINLP+ G+++GVIG+TG+P+ + YGEL+ E++++++ + Sbjct: 61 KEDENVLRGVKAGINLPIFFHGDVIGVIGITGDPKKVSPYGELLKKMTELLIQENYYIEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L ++R E V +QA E +P+ E AQ IDL+ R V I + + + M Sbjct: 121 LQLEARTLETFVFEWLQAREWSPSFYERAQLFHIDLHAKRRVMIASLKETKQTISVDM-- 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +Q + + +++ +++L D E +++ + + + + Sbjct: 179 WKYVQTVWS--DARDVIVRWGNDRLLIL------QTDDDKERTIAKIKTMQRALLDKYDV 230 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + G SY+ A+ + + KQ F +DL L + L+ + + Sbjct: 231 TLHIGCGKMGDS-KQAYHSYKQAERALHIAKQ---TGDIVFDEDLRLDMCLEDISLATKQ 286 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R +A ++ L TL +F +N+ T++AL IH NTL YRL ++ E T L Sbjct: 287 ELIKRTIAPFI---HDEQLLHTLRTFFSNNLSLKQTAEALHIHINTLHYRLKKVQEYTNL 343 Query: 365 DLGNFDDRLLLYVALQLDEE 384 ++ + + + LY+A++ +E Sbjct: 344 NVRHIEHVVTLYLAIRFLDE 363 >UniRef50_B0K2X2 Transcriptional regulator, CdaR n=8 Tax=Thermoanaerobacteraceae RepID=B0K2X2_THEPX Length = 381 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 96/386 (24%), Positives = 179/386 (46%), Gaps = 15/386 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L + Q IV R M I+ NIN+MD +G II SGD RIG HEGA + S+ V ID Sbjct: 1 MLSHEDYQKIVNRLMNILGKNINIMDTKGVIIASGDSTRIGSFHEGAKIAASRKIDVIID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 D+ + G ++GIN+PL GE++GV+G+TGEP+ + +G ++ E+M+++ Sbjct: 61 DSNIEYYKGTKKGINIPLFYNGEVIGVVGITGEPKEIIGFGRIIKELVELMIQEYENKKY 120 Query: 125 LAQDSRLREELVMNLIQ----AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL---G 177 A SR + ++ E L A+ +G D+ + R + + ++ Sbjct: 121 EALHSRAMVSFIKEILNHPNIGHEEEKILKSRAKLIGFDIKKQRSLIVADIRGFNDFILS 180 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + ++Q+L+ + ++ L + E+V +++ ++L Sbjct: 181 KNLKEIDIQELKENIVEFIKSKL----NHDEIVFNFNEDRFVIMLSSKNPMPFCKELQEG 236 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 +K+ L + +G + S+ A + +G++ + ++D + +L+ S Sbjct: 237 VKKKFNLSCIIGIGPDCKDIKNYHTSFTIANKLIDIGRKI--DKDILDFKDYKIELLIHS 294 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L + L + N + T+ +F + SK LFIHRNTL YRLN+ Sbjct: 295 LSINDSIIFFEEYKDILNS--KNKDIINTIKVYFESGMNINLASKKLFIHRNTLTYRLNK 352 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDE 383 I E +D+ N + +Y+++ +++ Sbjct: 353 IKEEFNVDITNPYVCMKVYISILINQ 378 >UniRef50_C4I5I6 Carbohydrate diacid regulator n=19 Tax=Proteobacteria RepID=C4I5I6_BURPS Length = 487 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 151/381 (39%), Positives = 221/381 (58%), Gaps = 3/381 (0%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 +D ++A +IV RT+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+ Sbjct: 82 AMMIDARLATEIVVRTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVE 141 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 ID A+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L Sbjct: 142 IDAAMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLT 201 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L +++R REE V+ L++ L WA RLGID+ + + ++ + Sbjct: 202 VELRRNARHREEFVLQLLRRTAAAAELEAWADRLGIDMRLAHAAIVCRLSGVDTEPEAGV 261 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD--AEDHRKRVEQLITRMKE 240 +++ +Q+ L L A S E+V+ GR A KR+ L +++ Sbjct: 262 GQIEAMQSQLAQEWPQLLSAKTSYRELVMFDAVDARAGRDGVLATHAGKRLAALEGTLRK 321 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L Sbjct: 322 VATQPFSLALGIALDGIDGFERSYQCALATLRVGAARTPQRAAYSYYDFVLPVLLSALSQ 381 Query: 301 DWQANELARPLARLKTMDNNG-LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 WQA +L PL RL + L TL AW+ H+ P AT++AL IHRNTL+YRL +I Sbjct: 382 GWQARQLRLPLTRLLARERRSGALLDTLKAWYAHDGHPSATAQALGIHRNTLDYRLQQIR 441 Query: 360 ELTGLDLGNFDDRLLLYVALQ 380 + TGLDLG DDRL LY+ALQ Sbjct: 442 DATGLDLGAIDDRLWLYIALQ 462 >UniRef50_C1PB42 Transcriptional regulator, CdaR n=1 Tax=Bacillus coagulans 36D1 RepID=C1PB42_BACCO Length = 361 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 169/380 (44%), Gaps = 19/380 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L K+A IV ++D +I V+D G I+ S ++RIG H GA V + + I Sbjct: 1 MLLFPKIAGKIVNEVQSVMDEDIIVVDENGVIMASTQKDRIGNFHMGAQKVFQTNKKLYI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ +A + GVR GIN+P+R EG +GVIG+TG P+ + Y EL+ E++++++ Sbjct: 61 DEEMAAQMEGVRMGINMPIRFEGRTIGVIGVTGNPKEVEHYAELIRRLTELIIQETVHAE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +R E + E LGI + P + +++ G Sbjct: 121 QARSKTRGLEAYFYEWATVKAYDQHFVERGLMLGIPMQVPHICCFLKMAVPPSGETEIFE 180 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 LQ +++ S ++LK F ++R + K Sbjct: 181 RLQSYIET-----DRDMIVHWSPGLFLLLKSVEAPFS-------KERFYGQLEDFKRRFA 228 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 V +G I +S++ A+ + V FY+DL+L +L++ + + + Sbjct: 229 PNCAVGVGKTAGTYV-IRQSFKEAQKALKVA---GKNGGIVFYEDLLLDLLIEEVSEEAR 284 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L + +A+L+ L TL A+ +N+ T+ L +H NTL YRL +I+E+TG Sbjct: 285 QEYLQKTIAKLQEH---AGLAETLQAYLANNLSLKETAAQLHVHINTLHYRLKQITEVTG 341 Query: 364 LDLGNFDDRLLLYVALQLDE 383 +D + L Y+A+ L E Sbjct: 342 IDPKTAEGIALFYLAVHLAE 361 >UniRef50_A3JFF9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFF9_9ALTE Length = 377 Score = 271 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 118/374 (31%), Positives = 187/374 (50%), Gaps = 9/374 (2%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 LD AQ IV R M++I ++NVM G II SGD R+GE+H+GA V +G + +D Sbjct: 4 LDQTTAQRIVDRAMQVIGHSVNVMTPDGVIIASGDPLRVGEIHQGARHVAVRGESLAVDA 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A GVR G+N+P+ + ++V V+G++GEP + + +LV +TAE+MLE + L+ L Sbjct: 64 HNAEQFPGVRHGVNVPITVGHQVVAVVGISGEPAKVLPFADLVKVTAELMLEHTALLELG 123 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 R E+ ++ LI W +R+G D QPR+ I+E D ++ Sbjct: 124 QHRRRQIEDTLLALINGRTVPQ---VWLERVGFDQAQPRLALIIEPAQLPGPDDFVIS-- 178 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 L L +++ L+A V+ ++VL P + +++L + Sbjct: 179 --LMRQLEISDKSLLLAQVAPQRLLVLVPVKLPGTPEHRSMTEQSLKRLQRHLPAAIYAP 236 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 +++G Y ++ Y +A TM G++ P + + Y D + +L +S WQ + Sbjct: 237 MVIAVGQYTES--NLRGCYESALATMTYGRRESPHLKTHCYSDSPVAILWESFHPGWQQH 294 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 EL RPL L + L RTL A+F N + L +HRNT+ YRL I +LTGL Sbjct: 295 ELLRPLHALHAHPRHLLYARTLQAFFDANGDVQQCASTLHLHRNTIRYRLKSIEQLTGLS 354 Query: 366 LGNFDDRLLLYVAL 379 + L LY+AL Sbjct: 355 PFKLPELLHLYLAL 368 >UniRef50_A8FJ59 Sugar diacid utilization regulator n=2 Tax=Bacillus pumilus RepID=A8FJ59_BACP2 Length = 370 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 199/380 (52%), Gaps = 17/380 (4%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L T++AQ++V RTMRI+D NINVM+A G IIGSG+R RIG+ H+GA LVL+ G ++ID Sbjct: 4 LTTELAQEMVERTMRILDKNINVMNADGVIIGSGERNRIGQKHDGARLVLTSGNSMEIDY 63 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + L GVR GINLP+ ++VGVIG+TGEPEN+R + ELV M AE++LEQS L+ + Sbjct: 64 KASLQLEGVRPGINLPICFREQVVGVIGITGEPENIRHHAELVKMAAELVLEQSFLLERV 123 Query: 126 AQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQLGVDSAMA 183 R+ E+V LI + L A LG+DL++ R+ I + V S + V M Sbjct: 124 QWRQRIESEIVNQLISDSDVGDYQLKNRAAWLGMDLDKRRMAIIFQPVPSSEDAVHKMMH 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +Q +NA ++L+ + E+V+L+ ++ + V QL M+ Sbjct: 184 AIQYDKNA------DDLLGMTFRHELVLLREPISD------HRLKHVVVQLQRTMENAVG 231 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + V +G ++ S+ A+ ++ +GK PE YF++ L L + + Sbjct: 232 GQVLVGIGTVAADISRLSLSFEHARDSLRLGKALDPEESIYFFESYQLERLFITAGVVEE 291 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L L TL+ + L+IHRNTL YRL++I LTG Sbjct: 292 NVSWTDFYKPLT---QEVELAHTLSIYIEEGGDLQRIVDRLYIHRNTLRYRLDKIQALTG 348 Query: 364 LDLGNFDDRLLLYVALQLDE 383 D + + LY+A +++ Sbjct: 349 KDPRHVKQLMELYMAQLMNQ 368 >UniRef50_A8FDZ6 Possible carbohydrate diacid transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FDZ6_BACP2 Length = 374 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 173/377 (45%), Gaps = 15/377 (3%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVA 68 +A+ IV +++ I + G II + D RIG+ HEGA L +G+ + Sbjct: 2 TLAEKIVDEVKKVLTEEIIIAQTNGTIIAATDPARIGQFHEGAYLTSFEGQKRILTKDDE 61 Query: 69 RHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 + + GV+ GINLP+ + E++GVIG+TG P ++ +GE++ E+++++ D Sbjct: 62 QRMKGVKAGINLPIYFKQEVIGVIGMTGNPIHVSPFGEILRKMTELLIQEHEFFLETETD 121 Query: 129 SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 R E V + + E LTE A RL +D+N RVV +++ + +++ Sbjct: 122 ERQLEAFVFDWLHLPETAIDLTEKAARLQLDVNMQRVVVLIDCHDESFMKQD---QYKKV 178 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 + L + +V +++L+ + N D + ++R+ + + + + Sbjct: 179 KEMLHLTHQEMIVRWGHARFLLMLQTSAN-----DRDTLQQRLFHIHAALTARSTSKVLI 233 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 G G + +S+ A + + ++ F +DL L + ++ + + + L Sbjct: 234 GAGKPAAG-QMMKQSFHQAFRALKMA---NADTPIVFDEDLTLELFIEEVSQETKEVFLD 289 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 R + L L +TL + T++A+ +H NTL YRL RI +LT LD Sbjct: 290 RTIVPLLPY---PELVKTLRVLMTSDCSLKYTAEAMHVHINTLHYRLKRIQDLTTLDPKR 346 Query: 369 FDDRLLLYVALQLDEER 385 D +L Y+AL L + Sbjct: 347 MQDAMLFYLALMLLDHH 363 >UniRef50_C6PWQ0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWQ0_9CLOT Length = 355 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 31/378 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ IV R M++I N+ + D G II SGD +RI + H GA L+ +V+ID Sbjct: 4 LSEELAQKIVDRMMKVIPYNVIITDENGIIIASGDVKRIHQFHSGAKQALNIKEIVEID- 62 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 H GVR G+N P+ +G ++GVIG+TG PE ++ + ELV +TAE+++ Q ++ Sbjct: 63 --CEHSQGVRPGVNSPIFFQGNLLGVIGITGVPEIVKPFSELVRVTAELLISQEYVLKNQ 120 Query: 126 AQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + +E+ + L E + E LGID+ P + ++ +S Sbjct: 121 SIQEQEKEKFLYELAYLNEGYSQGFIERGLSLGIDVTVPDIAIVI---------NSEEES 171 Query: 185 LQQLQNALTTPERNN-LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L+ L+N L + +N +++ +V + L +++ Sbjct: 172 LKSLKNHLNSLLQNGEYCFMLNPNIIVAFISLKKP-----------FLNILRKSLEKKQY 220 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 +V +G I+ S A + +GK + Y Y+DL +L +++ D+ Sbjct: 221 GNIKVGVG---LSEHIISVSMNQAFKALHIGKHLQKDKSIYLYKDLCFISMLANIKEDYN 277 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 E+ + L N L TL A+ +N + T++AL +HRNTL YRL RI E++G Sbjct: 278 LKEVVKILK---LEGNQADLLNTLIAYVYNNGEMQTTAQALHVHRNTLNYRLERIKEVSG 334 Query: 364 LDLGNFDDRLLLYVALQL 381 D NF + L+ A + Sbjct: 335 KDPRNFIELFELFTAYVV 352 >UniRef50_Q2T8U4 Carbohydrate diacid regulator n=4 Tax=Burkholderia thailandensis RepID=Q2T8U4_BURTA Length = 402 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 151/379 (39%), Positives = 223/379 (58%), Gaps = 3/379 (0%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 +D ++A +IVART+ ++ ++NVMDA G I+ S D R+GE+H GA L L++ R V+ID Sbjct: 1 MIDARLATEIVARTVEVMPFDVNVMDAHGVILASSDAARVGEIHAGAQLALARARAVEID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 DA+A +L G R GINLPL + G++ GVIG+TGEP+ +R +GEL+ +TAE++LE+ +L Sbjct: 61 DAMAANLSGARPGINLPLSVRGKVCGVIGVTGEPDAVRGFGELLRVTAELILEREQLTVE 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L +++R REE V+ L++ L WA RLGID+ + + ++ + + Sbjct: 121 LRRNARHREEFVLQLLRRTAAAAELEAWAGRLGIDVRLAHAAIVCRLSGVDADPEAGVGQ 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGR--WDAEDHRKRVEQLITRMKEYG 242 ++ +Q+ L L A S E+V+ + R A KR+ L +++ Sbjct: 181 IEAMQSQLANEWPQLLSAKTSYRELVMFEAIDARAVRDGALATHAGKRLAALEGTLRKVA 240 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 F ++LG G RSY+ A T+ VG R P+ Y Y D +LPVLL +L W Sbjct: 241 TQPFALALGIALDGIDGFERSYQCALATLRVGAARTPQQATYSYYDFVLPVLLSALSQGW 300 Query: 303 QANELARPLARLKTMDNNG-LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 QA +L PL RL + L TL AW+ ++ P AT++AL IHRNTL+YRL +I + Sbjct: 301 QARQLRLPLTRLLARERRSGALLDTLKAWYANDGHPGATAQALGIHRNTLDYRLQQIRDA 360 Query: 362 TGLDLGNFDDRLLLYVALQ 380 TGLDLG DDRL LY+ALQ Sbjct: 361 TGLDLGAIDDRLWLYIALQ 379 >UniRef50_Q81GB0 Carbohydrate diacid regulator n=75 Tax=Bacillus RepID=Q81GB0_BACCR Length = 371 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 18/379 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A IV R+I NI +++ G II S D ERIG+ HEGAL Q + V I Sbjct: 1 MLFPDLANKIVREVRRLITENIIIINIEGVIIASTDTERIGQFHEGALRCAKQKKTVIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 R L GV+ G+NLPL E++GVIG+TGEPEN+ +YGE++ E+++ ++ + Sbjct: 61 KEDERRLQGVKAGMNLPLLFHDEVIGVIGITGEPENISRYGEILRKMTELLIHENYFLEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 L + R E V + +Q E +P+ + A+ LGIDL + + + + + + + Sbjct: 121 LELEHRSYEAFVFDWLQNTEWSPSFLDRAKTLGIDLYKKKQLILFSIGKNDTMLQRKI-- 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 Q ++N LT + +L ++ + E + +++L + + Sbjct: 179 WQHIRNILT---KEHLFVRWGNDRFILFTAMSSK------EQTYQFLKRLKQDCETLFSI 229 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + +G T P +++ Y A + V + + F +DL L + L + + + Sbjct: 230 PLYIGIGQTVT-PNNMSICYEQALRALSVS---LETKKIVFNEDLRLEMCLQDISVETRE 285 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L R + L + L +TL + +N T+K L IH NTL YRL +I E TGL Sbjct: 286 QFLERTIENLLSF---PELMQTLRLFVDYNQSYKQTAKQLHIHINTLHYRLKKIEEHTGL 342 Query: 365 DLGNFDDRLLLYVALQLDE 383 D F D +LY AL L + Sbjct: 343 DPKQFKDLNVLYFALLLLD 361 >UniRef50_Q2B5K4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B5K4_9BACI Length = 372 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 15/382 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +A+ I+ ++ I V++ G I+ S +R+G HEGAL + + I Sbjct: 1 MLLPALAEKILREVRGVLKEEIIVVNTDGIIVSSTSPDRVGAFHEGALQSVKKRDKRIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + L GV+ GINLP+ + E+ VIG+TG+PE + YGE++ E+++ ++ Sbjct: 61 ADDEKKLKGVKAGINLPVFFQKEVAAVIGITGDPEKVAPYGEIIRKMTELLISENFYSEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + SR E V + +Q + + + A L +D R+V I E + Sbjct: 121 IDWQSRALEGFVFDWLQERGHGSSFIDRALMLKVDTRLDRLVFIAEFLEPEKIPSR--EI 178 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 Q+L + N+L +V L + RV + + + Sbjct: 179 WQRLLS-WPEKNSNDLFIRWGHDRIVALFAH---HSEEHIQRLEDRVSRYYSYLDRSSGS 234 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD-LMLPVLLDSLRGDWQ 303 G +++RS+R A+ + K+ + L L +L+D ++ + + Sbjct: 235 PLSGGAGQPAAS-SALSRSFRQAERAVKAAKKARG----LRFDKNLTLEMLMDEIKPETK 289 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + R + L+ + TL FR N T++++ IH NTL YRL +I +LTG Sbjct: 290 LDYIKRTIGPLQQH---PDVLATLKELFRQNHSLKKTAESMHIHINTLHYRLRKIEDLTG 346 Query: 364 LDLGNFDDRLLLYVALQLDEER 385 L GN +LY+A L +E Sbjct: 347 LGTGNAQQLFILYMACLLLDEH 368 >UniRef50_P94536 Uncharacterized protein ysfB n=2 Tax=Bacillus subtilis group RepID=YSFB_BACSU Length = 368 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 176/381 (46%), Gaps = 16/381 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L +A+ I+A ++ + + +++ G I+ + ER+G+ HEGAL+ + R V I Sbjct: 1 MFLQPLLAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGALICAKERRSVII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 L GV+ GINLP+ + +++ V GLTGEP ++ +GEL+ E+ +++SR + Sbjct: 61 TKEDETRLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQPFGELLRKMTELFIKESRHLE 120 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 R+ E +++ +Q +E +P+ E AQ LG+DL+ R + +++ G + + Sbjct: 121 QSQWRERMLESFMIDWLQLKEWSPSFLEKAQLLGVDLSSRRQMILIQ------GYEWSPH 174 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +++Q+ + + +L +++ + +++ + + Sbjct: 175 DIEQMARSWKSSYPADLFIRWGNERILI---NHEVPQHEQRDRLLRKILHICSFANTASS 231 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 G S+ SY A+ + V +R F +DL L + L + + Sbjct: 232 QYTAAGAGRAVAS-SSLTDSYEQAEKALAVSLKRKTP---IFEEDLKLDMCLTEISPGTR 287 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 R L + L T+ +F H++ T++ + IH NTL YRL + +LTG Sbjct: 288 NEFPQRVLGKALEH---QELMNTIRTFFHHDLSLKQTAEDMHIHINTLRYRLAKAEQLTG 344 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 L +D + +YVAL ++ Sbjct: 345 LRFDRTEDVVTMYVALYFLDQ 365 >UniRef50_C4Z0Z8 Carbohydrate diacid regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0Z8_EUBE2 Length = 390 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 94/387 (24%), Positives = 175/387 (45%), Gaps = 19/387 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 H+ A IV +++ NIN+MD G II S D+ RIG+ H GA ++S+ + + Sbjct: 1 MHISKNSATQIVEEISKLVKQNINLMDETGHIIASRDKSRIGDFHYGAYKIISEN-LEEY 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G+++GINLPL L+G IVGVIG+TG E + G+L+ E++L +SR + Sbjct: 60 YIDEDDLSKGIKKGINLPLELDGGIVGVIGMTGGYEEVITSGKLLKKMTEILLMESRANY 119 Query: 124 LLAQDSRLREELVMNLI-QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + R+R + L + LGID+N+PR V I +D DS Sbjct: 120 RQLMNKRVRNAFYEEWLINGGYKNADLEDRGMALGIDINKPRRVFIASIDELDNLKDSQQ 179 Query: 183 AELQQLQ-----NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + Q + +A + + +++++ D E+ K +L Sbjct: 180 GQSQIAKFENDVDAFLKRNNYKMHFRNASRQIIII-------DNMDTENVVKFAGELAGY 232 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + E + + + + + + +Y A ++ + Y+D+ L +L+ + Sbjct: 233 VWEKDKFELNIGIDSAQS--YDMHEAYVEAHRAWTAAAEKH--EQIICYEDISLELLISN 288 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + + L + + ++ L A+F + L+IH+NTL+YR+++ Sbjct: 289 VPTEIKLEYLKKVFKDM-DYNDVCENIALLKAYFNAQGSIQKAADNLYIHKNTLQYRISK 347 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDEE 384 + E+TGLD+ + LY+A + +E Sbjct: 348 LKEITGLDVRKPTESPALYLAYIITDE 374 >UniRef50_D1Y1G6 Putative sugar diacid utilization regulator n=2 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1G6_9BACT Length = 432 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 29/409 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L K AQ+I + T II N+ + D GRIIG+ ER+G+LHE +L V G Sbjct: 7 IDEMTLIQKCAQEIASSTAAIIGHNLIITDVDGRIIGASQTERVGQLHEASLEVARTGTA 66 Query: 61 VDIDDAVARHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 + AR G G+ P+R L G VG + LTG P+ +R +G +V E++L + Sbjct: 67 SETTREQARLFRGTLPGVTFPIRNLNGRTVGTMALTGSPDEVRPFGLIVKKQIEILLRER 126 Query: 120 RLMHLLAQDSRLREELVMNL---IQAEENTPALTEWAQRLGIDLNQPRVVAIVEV----- 171 L + + + L+ +L + N L A LG D + + +V++ Sbjct: 127 ELHVYSSSRESIIQNLIHDLETFVPGVGNETMLQSRAIELGYDPSLFYIPIVVDLYQFGR 186 Query: 172 -------DSGQLGVDSAMAELQQLQNALTTPER------NNLVAIVSLTEMVVLKPALNS 218 + + ++ A+ R +N+ +I V L ++ Sbjct: 187 YALAVRRECRDGDSGQVEMRILNVKKAILAEMRGVFSHPHNISSISGNNRFVTLHAVKDA 246 Query: 219 FGRWDAEDHRKRV------EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 + L+ R+++YG L+ + +G+ +++ S A+ ++ Sbjct: 247 DRADPQHEKAALAQVVELSRSLLDRLEDYG-LKAAIGIGSPAHSIAALSISCHEARKVLM 305 Query: 273 VGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFR 332 +GK+ Y D + ++ ++ + + L+ + L +T+ AW Sbjct: 306 LGKKFKQRPDVYCIADFRMEDVISTIDAPVRIRFIKALTGNLRAKSDWPELEKTIRAWCE 365 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + T++ L IHRNTL YRL +I LTG D+ +F Y AL L Sbjct: 366 SGFSLVGTARRLHIHRNTLIYRLEKIERLTGEDIHSFPACFNFYFALLL 414 >UniRef50_A6V9E8 Putative uncharacterized protein n=7 Tax=Pseudomonas RepID=A6V9E8_PSEA7 Length = 370 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 186/369 (50%), Gaps = 15/369 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+I Sbjct: 2 FELDSALAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ A L GVR G+NLPL +VGV+G+TG PE +R Y ELV M AEM++EQ ++ Sbjct: 62 DEQAAACLRGVRPGVNLPLLHAERLVGVLGITGAPEVVRPYAELVRMAAEMLMEQRQMQD 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + +E + L+ AL A+ LG+ L+ PR +E+ + Sbjct: 122 ERHWQRQRQETWLRQLLDPAHGLGALAADAEHLGLALHWPRQAVFLELHEHADPLPFQAR 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L L + + A + + +PA + +E + R G Sbjct: 182 LLAALGSR-----AEHWSAALGERLVFWCRPASQA----------DALEHWLERADARGW 226 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R+ + ++ S R A+ + + R+P R L LL S R +WQ Sbjct: 227 GVARLCCSDPVHSLEALRASARAARELLDYARSRLPGQRVVGLDGHRLASLLFSQRDNWQ 286 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +L PL R+ D GLL TLA W H+ P A ++AL IHRN+L YRL RI+ ++G Sbjct: 287 VRQLLAPLQRVLDHDPQGLLAATLACWCAHDGHPQACAQALGIHRNSLRYRLERIASISG 346 Query: 364 LDLGNFDDR 372 LDLG + R Sbjct: 347 LDLGRLEHR 355 >UniRef50_C9M8C5 Putative carbohydrate diacid regulator n=2 Tax=Synergistaceae RepID=C9M8C5_9BACT Length = 405 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 93/392 (23%), Positives = 163/392 (41%), Gaps = 15/392 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDI 63 L +AQ++ R I ++ + D G IIG D R IG L+E V + G+ Sbjct: 1 MLRP-IAQELAETIARTIGYDVVITDLAGIIIGCSDPTRGIGTLNEACAQVAASGQPRWE 59 Query: 64 DDAVARHLHGVRQGINLPLR-LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 + A+ L G + G+ P+ ++ ++ G I LTG PE +R + LV AE+ L++ Sbjct: 60 SEEDAKLLKGTKPGVTYPILGVDRKVAGTIALTGAPELVRPFALLVKTQAELYLKERIAA 119 Query: 123 HLLAQDSRLREELVMN--LIQAEENTPALTE-WAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 L + R + LV + L + N P + E A+ +G + V + S Sbjct: 120 AELQERERNFQALVSDIALFKQGINDPKIYETRAELMGYTPSSSYCVVALNETSQPDEGS 179 Query: 180 SAMAELQQLQNALTTPE-----RNNLVAIVSLTEMVVLKPA---LNSFGRWDAEDHRKRV 231 S A+ Q L+ +L S V ++ R +D +KR Sbjct: 180 SHGADYSAQQRLLSEIRTCFGNPGDLCGSTSPHRFVAFCAVNCDDDTSSRSVLDDVKKRC 239 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 E L+ R+ +L ++ +G ++ SYR A + +G + + Sbjct: 240 ETLLNRL-TAAKLPCKIGIGGIHRDIDGLSASYREALAALQMGGNADSSEPIHCISGYRI 298 Query: 292 PVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 LL Q + R LA L ++ L+ T+AAW + ++ L +HR T+ Sbjct: 299 EELLLKSEMTLQDALVERELAPLFARNDGDELQDTIAAWCESGFSVVRAAELLHVHRTTV 358 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +YRL ++ + ++ +F + LY A+ L Sbjct: 359 DYRLEKLQRILSVEPRDFREMSRLYWAVVLWR 390 >UniRef50_C9M5T1 Putative uncharacterized protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5T1_9BACT Length = 449 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 164/391 (41%), Gaps = 19/391 (4%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARH 70 AQ+I T I+ ++ + D +G IIG+ ER+G HE + V+ G VA Sbjct: 52 AQEIARSTAGIVGYDVIITDMKGIIIGASRAERLGCHHEASDEVIRTGHSSATSAEVAAT 111 Query: 71 LHGVRQGINLPL-RLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 + G G+ P+ L G +VG + +TGEPE ++ + +V E++L + L Sbjct: 112 MSGTLPGVTHPIASLNGTVVGTMAITGEPEAVQPFALIVRKQIEILLREQERFALTVNRE 171 Query: 130 RLREELVMNLIQ---AEENTPALTEWAQRLGIDLNQPRVVAIVEV--------DSGQLGV 178 ++LV ++ + + AL A GID + E+ + +G Sbjct: 172 SSLQDLVQEMVSFAKGDGDEEALAARAGSYGIDARWYYLPLSAELYQLGRIAAGATGMGR 231 Query: 179 DSAMAELQQLQN------ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 + A E+ +L+ +R L V P + E+ R Sbjct: 232 EVAEQEIYRLKADVLVEIRAAFGDRRALCTGTVAGRFAVFWPLGSEPDEEAIEEAVNRGR 291 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 QL+ R+ G + + GN G ++A+SYR A + +GK+ Y + + Sbjct: 292 QLVDRLGSRGH-KIAIGFGNPARGIRAVAQSYRDAGRALAMGKKLRRGPGVYRINEFRIE 350 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 LL + ++ A + L+ + L+ T+ W + SK L +HRNTL Sbjct: 351 ELLSLVDRRNRSRFAAPITSPLRAQSDWEDLKNTVRVWCDSGFSLVDASKRLAVHRNTLL 410 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YR +I LTG +F L LY+AL +DE Sbjct: 411 YRQEKIERLTGRKTRDFRAMLELYLALVIDE 441 >UniRef50_C1TMV9 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMV9_9BACT Length = 391 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 90/387 (23%), Positives = 173/387 (44%), Gaps = 12/387 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRER-IGELHEGALLVLSQGRVVDI 63 L+ +AQ++ +I ++ + D +G IIG D +R G L+E + + GR Sbjct: 1 MLEP-IAQELAKSISEVIGYDVLITDVKGVIIGCSDPDRGFGTLNESSRIAAETGRGSVD 59 Query: 64 DDAVARHLHGVRQGINLP-LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 + V+ L G R G+ P + +G ++G + +TG+PE + + +V AE+ L + + Sbjct: 60 TEEVSHRLKGTRPGVTYPMVGPDGRVIGTVAITGDPEKVTPFALVVKRQAELYLRERIMQ 119 Query: 123 HLLAQDSRLREELVMN--LIQAEENTPALT-EWAQRLGIDLNQPRVVA---IVEVDSGQL 176 + + R + LV + L+ ++ + P L A+ G D + V V + Sbjct: 120 REVMERERNLQALVSDVFLLNSKVSDPELLLNRAEHFGYDRSSEYVALSVETVRLRDSAG 179 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 L +L++A+ +L+A + + VV P G +E + + Sbjct: 180 AGVYRDPVLARLRDAMG--GPRSLMAAMKMDLYVVFLPLSGKLGADLSERIGEIWNGVRK 237 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + + V +G+ G +ARS + A+ + +G++ P R Y + + LL Sbjct: 238 SLSS-MGIEAAVGIGSGAMGIEELARSCKEARLALRIGRKVAPGVRFYPIKGYRVEELLF 296 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + R L+ L+ + LR TL AW S++L +HR+T+ YRL Sbjct: 297 FSPRSLTESMSERELSPLEGRGDTEELRDTLTAWCESGFNVAEASRSLHLHRSTVNYRLE 356 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDE 383 +++ + +D+ +F + LY A+ LD+ Sbjct: 357 KLASIFHVDVRDFREMSRLYWAISLDK 383 >UniRef50_C0CLC5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLC5_9FIRM Length = 368 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 94/384 (24%), Positives = 171/384 (44%), Gaps = 27/384 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + + + +A IV + + NIN + G II S D RIG HE G + Sbjct: 4 IMSYPISRPLASQIVDAVSDVCEKNINFITPDGEIIASTDSSRIGTYHEIGRRAAQSGTL 63 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 ++I G + GINLP+ GE++ +IG++G+P+ + KY L +++ +S Sbjct: 64 MEI--PQDSLYPGTKAGINLPVYHNGELLAIIGISGDPKEVSKYAHLAERITRLLVCESE 121 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWA-QRLGIDLNQPRVVAIVEVDS--GQLG 177 L + R L+ L++ TP E L ++L P + ++++ Q G Sbjct: 122 GNLHLRDLEQKRGYLIQKLLKGAPITPEDLETLPSDLNLELQTPSRILLIQLGHQFPQTG 181 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + E+ L +L L E + + P + ++ Sbjct: 182 IPAVEPEIYHLFRSLEL----TLYCFQYPREYLAILPEPK----------LTNCRETLSH 227 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 E + + +G T P + SY+T + + + S C F+ L L +LL Sbjct: 228 FGEKHKGSLCMGIGK-CTSPQQLMHSYQTCQIALKSAQL--SGSSCVFFDQLYLELLLSD 284 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + D Q +R ++ L + D L ++ N+ +A + L++H+NTL+YRLNR Sbjct: 285 VSSDLQQEYFSRTVSHLSSEDR-----ELLLVYYEENMSLVAVCERLYLHKNTLQYRLNR 339 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 I ++TGL+ +F+D ++LY+ L+L Sbjct: 340 IRKVTGLNPRDFEDAVILYLGLKL 363 >UniRef50_UPI0001B4EB72 sugar diacid utilization regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB72 Length = 398 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 104/378 (27%), Positives = 174/378 (46%), Gaps = 6/378 (1%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L ++AQ+I RI N+ + D +IG GD R+G +HE +L V+ GR Sbjct: 10 LTPQLAQEIAHDIGRITGFNVLITDPGAVVIGCGDLSRVGTVHEASLEVVRTGRPAIHTA 69 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 A + GVRQG++LP+ + E++G + LTGEPE + ++G +V AE++LE++ L+ Sbjct: 70 GQASRMRGVRQGMSLPITVGEEVIGTVCLTGEPEEVDRFGLVVRRQAEILLEEAALLRSR 129 Query: 126 AQDSRLREELVMNLIQAEE---NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 R ++ V ++ + + A+ A LG+ R ++EV + G + Sbjct: 130 MLHERAVDDFVRDIALYDPEVVDAGAVDARAVELGLAPGAARAALLLEVRAADEGAAMSR 189 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + + + +R ++ + VVL A R QL++ + E Sbjct: 190 ITVLRTVREVFR-DRQDVAGEQAAGRYVVLAAAYGE--RTAPGRLADACGQLLSLLHERH 246 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 L R+++G TG + SYR A T + G P R Y +L +P LL S Sbjct: 247 GLDGRMAVGEPGTGTTGMHHSYRDAATALRTGPAVFPGDRVYTASELRIPHLLGSTPRHG 306 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 +A L L+ + LR TL W + +++ L IHRNTL YRL +I +L+ Sbjct: 307 RARFADAVLGDLRGQPDWPTLRETLIGWAEGGFHLVRSAERLHIHRNTLLYRLEKIGKLS 366 Query: 363 GLDLGNFDDRLLLYVALQ 380 G + + +Y+A Sbjct: 367 GKRVREPVQAIEMYLACL 384 >UniRef50_Q5WCX7 Sugar diacid utilization regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCX7_BACSK Length = 371 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 183/380 (48%), Gaps = 22/380 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ I+A ++I ++ +++ G II S D R+G HEGA L +++ R I Sbjct: 1 MLTDVLAQKIIAEASQLIKEDLIIVNRDGYIIASTDPNRVGTFHEGASLCMAERRKRLIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A HL GV+ G+NLP+ + ++ GVIG+TGEPE + YGEL+ E++++++ +M Sbjct: 61 ANDATHLKGVKPGLNLPIVVFQQVAGVIGITGEPEQMEPYGELLRRMTELLIQEAHMMEQ 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + +R + V ++A T L A +D+ + + ++E + +A+ Sbjct: 121 MQWQTRALQGFVQEWLEAGALTEPLKRQAAAHSLDVQTEKQIVLIETGLEESIHWRGLAQ 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ +R ++AI + V+L + + + V L + Sbjct: 181 WRE--------QRKGMIAIPWERKKVLLVCSPQTET-----ALKATVHTLAETLA--IGG 225 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + G P I +SY A+ +V ++ +R F +L L + ++++ D +A Sbjct: 226 SWWGGAGRALP-PDEIKKSYAEAQAALVAARK---TNRFVFEHELKLELCVEAIPADTKA 281 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + R L ++ L TLAA+ ++ T++AL +H NTL YR ++ + TGL Sbjct: 282 RFVERVLKKVSD---EQELLGTLAAFLENDQSLKRTAEALHVHINTLHYRFQKLKQHTGL 338 Query: 365 DLGNFDDRLLLYVALQLDEE 384 D+ +D +L Y+A E+ Sbjct: 339 DVRKSEDFVLFYLAHLFLED 358 >UniRef50_B1HVI8 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HVI8_LYSSC Length = 359 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 21/378 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L K+A +IV +TM + NINV+ G I+ SGD+ R+ ++HEGA+ V + + I+ Sbjct: 1 MLTKKLADEIVHQTMLRLRHNINVISPTGVILASGDKMRVEDIHEGAVYVAQTKKTLIIN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + GIN+P+ + E+VGVIG+TG+ E + + LV +T E+M Q+ + Sbjct: 61 EDNIELYPNTKPGINMPILYQDEVVGVIGITGDSEEMLEIANLVQLTTEIMTHQALVESK 120 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + + L+ + L + Q+L L P V +V + + Sbjct: 121 SEWQRKNNDYIFEALVHGSKLDATLNKRIQKLPFSLIAPFQVILVSLHETSYLENRMPFF 180 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + L + L L E +L ++++ ++ L + ++ Sbjct: 181 FEDLF-----YRQPILAGHSQLQEYYILLTYRQE------QNYQSIIKALRKKKQKLP-- 227 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 ++ +G + SY+ A+T + F++D+ L L + Sbjct: 228 SLQIGIGPVVQQLSQLPYSYQGARTALEFATIHNE---ITFFEDVELFSLFKHRESEEVQ 284 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 R L + TL ++F N+Q ++ L IHR+TL YRLN+I ELTG Sbjct: 285 AFHHRILKNINAKQ-----LETLQSFFDCNLQLKLCAQQLNIHRHTLTYRLNKIRELTGY 339 Query: 365 DLGNFDDRLLLYVALQLD 382 D F+D ++L +A L Sbjct: 340 DPQYFEDAVILQMACTLR 357 >UniRef50_Q67LH0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LH0_SYMTH Length = 405 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 100/385 (25%), Positives = 164/385 (42%), Gaps = 17/385 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + +++AQ I R + I+ N+N+MD G I+ SGD RIG H+ A V+ R + Sbjct: 24 ITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTNRRL 83 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 DI GVR G+NLP++++G VGV+G+TG P+ + +GEL+ + L Q R Sbjct: 84 DIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRA 143 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L RE + L+ ++ + + A + + V + + G G+ Sbjct: 144 EELERVRLMARESFLRTLLTSKGPIGERMVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSR 203 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 AE + L L + + + V+ L + E Sbjct: 204 IWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDPP-------------RDLSAVLLE 250 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 F V+ G G + RSY TA + G+ Y+ + + L +L Sbjct: 251 ALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRL-LTTLPP 309 Query: 301 DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 A +A L L D LLR T+ A+ + + L IHR+TL +RL I Sbjct: 310 SEVAEFVAGMLGGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAI 369 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 +E +G D +++ L LY+A+QL+ Sbjct: 370 AERSGTDPRSWEGLLSLYLAIQLER 394 >UniRef50_D0I4U8 Sugar diacid utilization regulator SdaR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I4U8_VIBHO Length = 356 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 176/354 (49%), Gaps = 15/354 (4%) Query: 29 MDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEI 88 MD +G II S D R+ + HEGA+L LS+ R ++I + + ++ GV+ G+NLP+ + + Sbjct: 1 MDEQGYIIASTDHSRLHQRHEGAILALSEKRTIEITEEMQHNMWGVKPGVNLPIFFKEQA 60 Query: 89 VGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA 148 +GV+G++G+ E +R+YGELV M AEM +E + + LL +EE V+ + E + Sbjct: 61 IGVVGISGKLEAVRQYGELVRMAAEMTVEHAHELDLLRWSETRKEEFVLQWLYHETHEDH 120 Query: 149 LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTE 208 L A +L ++L+ P VA+ + + + L LT + L A S Sbjct: 121 LRSLAGKLNVNLDTPYGVALCQHP--------IDVDQRTLTTQLTPIHPHILKASCSGVI 172 Query: 209 MVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAK 268 +VVL P + K +++L+ ++ + R+ + + I ++ Sbjct: 173 LVVLVPLQGKKPETLNQYWEKNIQRLLKQLPVANRCRWVF--SDPVSDIDEIRNTFFGLC 230 Query: 269 TTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLA 328 + + + + ++R D L LL+ + W+ ++ L + + L TL Sbjct: 231 SVLNGLQDNIHQARL---SDYPLAALLNPVSESWKLRQINNILRPI--EGKSPDLLTTLR 285 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 AWF HN T+ +L++H NT+ YRL +I E TGL L NF + LLY AL + Sbjct: 286 AWFIHNSDIDKTASSLYVHPNTVRYRLKQIEECTGLSLTNFQQKGLLYAALTIK 339 >UniRef50_C1TP28 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP28_9BACT Length = 405 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 92/397 (23%), Positives = 165/397 (41%), Gaps = 27/397 (6%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 +I T +I N+ + D G I+G+ D R+GELHE +L V+++ R + AR L Sbjct: 2 EIARSTSDVIGYNVIITDTDGVIVGASDENRVGELHEASLAVIAERRGSSTSEDEARGLK 61 Query: 73 GVRQGINLPLRLEGEIVGVI-GLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 G G+ P+ V +TG+ + +R + +V E++L++ A + Sbjct: 62 GTLPGVTYPISSMSGSVVGSMAITGDADKVRPFALIVKKQIEILLKEREFFEHAANREHI 121 Query: 132 REELVMNL---IQAEENTPALTEWAQRLGIDLNQPRVVAIVEV------------DSGQL 176 ++ + +L + N L A D V V++ D Sbjct: 122 LQDFIQDLSTFVPGVSNETILLARASEFRYDRTWIYVPVAVDLYQFGRFALSVRRDYVNR 181 Query: 177 GVDSAMAELQQLQNALTTPERN------NLVAIVSLTEMVVLKPALNSFGRWDAEDH--- 227 + +Q ++ + R ++ + S VVL + + Sbjct: 182 EGEKPETVIQGVKRKILLEIRRIFNGPKDISTMESNNRFVVLHGVRPAESYPAPSNAVTV 241 Query: 228 -RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 R++ E L+ R+ + G L V +G+ G +A SY+ + + +GK+ M Y Sbjct: 242 TREKTEDLLGRITDEG-LNAAVGIGSPALGIADLAASYKESWRALTLGKKFMQGPGVYCI 300 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 D L ++ ++ + + L L+ + L+ T+ +W + T+K L + Sbjct: 301 DDYRLEEMISTVAPSVRNRFVLSSLRTLREEPDWNELKDTIRSWCESGFSLVNTAKELHL 360 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 HRNT+ YRL++I +G DL NF L LY AL LD Sbjct: 361 HRNTVIYRLDKIKVYSGHDLRNFRTCLNLYTALLLDR 397 >UniRef50_Q0SH42 Possible sugar diacid utilization regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SH42_RHOSR Length = 386 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 99/387 (25%), Positives = 174/387 (44%), Gaps = 12/387 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ I +I N+ + DA G ++GSGD RIG+ HE ++ V+ R++ Sbjct: 1 MLSEALAQQIANEITDVIGFNVLITDAAGTVVGSGDERRIGQFHEASIEVIRARRMIAHS 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A R L G G+ +PL ++G++VG IGL+G PE + ++G +V E++++++ + Sbjct: 61 AADVRDLVGSLPGVTIPLVIDGDVVGTIGLSGSPEQVEQFGLVVKRQTEILMQEASRIGT 120 Query: 125 LAQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 R EEL+ ++ + + A LG DL PRV+ ++ DS V Sbjct: 121 RLTYERAAEELLRDICDWHRSTFTEAQIVRRATGLGYDLRLPRVMVLISYDSHSDDVAVQ 180 Query: 182 -----MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 L+ +Q+A + +LVA ++ + V DA R + ++ Sbjct: 181 GQPVSHRVLRAVQDAFDSA--TDLVAPLARQVVAVTTVVTARTPAADA-ALTDRCRKYVS 237 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 ++E G RV +G+ G + S + A + +G P + Y L + Sbjct: 238 LVRERGW-DTRVGIGSIAHGVEQLNLSSQDAYDALRLGAVLDPRGQVYDIDRFRLHQAVS 296 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + + + L L T ++ L+ TL AW ++ L +HRNTL RL+ Sbjct: 297 VIPAETRDRLSRAVLGALATDNDWPHLQETLIAWGECGFNSSRAAQRLHVHRNTLANRLD 356 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDE 383 +I+ L G L + LY+A + + Sbjct: 357 KIARLLGRPLDEPGLGMTLYLACVVAQ 383 >UniRef50_B2V472 Sugar diacid utilization regulator n=12 Tax=Clostridium RepID=B2V472_CLOBA Length = 354 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 99/382 (25%), Positives = 166/382 (43%), Gaps = 33/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++AQ IV + M +I N+N+MD G IIGSGD RIG LHEGAL L + V+I Sbjct: 1 MLSKELAQSIVNKVMEVIPYNVNIMDEDGIIIGSGDVSRIGSLHEGALNALKNKKTVEI- 59 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + G+N+P+ +I+GVIG+TGEP+ + +G++V +TAE+++ Q ++ Sbjct: 60 ---FKDYEYAKAGVNIPILFRNKIMGVIGITGEPKIVSPFGKIVSITAELLISQEYTLNQ 116 Query: 125 LAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +L EE + + EE T + L ID+ R V IVE D +L + Sbjct: 117 HIIKQKLIEEFIYEWLNINEEYTEEFVQRGMSLEIDIRIKRFVIIVEYDKSKLNEVNKFI 176 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + + N +S ++ +L R K +++ Sbjct: 177 D--------KNLKENEYSINISSNKIALLL----KSERITNNKIIKFYDKIQE------- 217 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 L ++ +G + S + +G + + Y Y ++ L + Sbjct: 218 LSIKIGVGRVHNAIIN---SLIDGVNALNIGNKLYEDKSVYVYDEI---KFLHKMSLLIN 271 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + L T + ++N + T+ + IHRNTL YRL +I E+TG Sbjct: 272 GKYEKEIIDDILEEAMGKELLETFLIYMKNNGERAKTANEIHIHRNTLNYRLEKIEEVTG 331 Query: 364 LDLGNFDDRLLL---YVALQLD 382 L ++ D L YV +L Sbjct: 332 LKFNDYLDLFQLITAYVGYKLY 353 >UniRef50_C0B9D3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9D3_9FIRM Length = 359 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 164/382 (42%), Gaps = 24/382 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M LD +A +V +IN +D +G I S + +RIG H + Sbjct: 1 MFKMKLDKSLAFQVVNTIKDTCGQDINFIDKQGMIFASTNADRIGTFHAIGHKAAQTEQT 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 +++ G ++GIN+PL G + VIG+TGEP+ +R+Y L +++ + Sbjct: 61 IEVFSDDD--FPGTQKGINMPLYYHGSFLAVIGITGEPDQVRQYVHLADRITHLLIREKE 118 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDSGQLGVD 179 L L + ++ LI+ E P + L ++ + + I++ Sbjct: 119 LNRLSRSLEDKKHFVIDALIRNEIADPDYLDTCLSDLQVNPGTKKRLLIIQSSPDGHNNS 178 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 S++ Q++ +T + VL+ + + + Q++ Sbjct: 179 SSLE--QKIIGLFSTLGITLYTFYYPNEYLAVLENSG-----------KAALYQILADFT 225 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 +++G ++ SY++A T + + E+ F+ D+ L +LL S+ Sbjct: 226 ADCGALLSIAVGKKC-QLFQLSLSYQSALTALKYCR--SSENGIAFFDDMTLEILLSSIS 282 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + L + ++ L + N L +F N+ L TS+ LF+H+NT++Y+LN I Sbjct: 283 EQEKNAYLQKTISALSDEERN-----LLQTYFEANMSLLGTSQKLFLHKNTVQYKLNHIY 337 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 + GL+ F D +LLY+ALQL Sbjct: 338 QKCGLNPRVFKDAVLLYLALQL 359 >UniRef50_C6PUN4 Transcriptional regulator, CdaR n=2 Tax=Firmicutes RepID=C6PUN4_9CLOT Length = 343 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 159/373 (42%), Gaps = 38/373 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L AQ IV + M +I NINVMD G IIGSGD +R+G+ HEGA + + ++ Sbjct: 1 MELSKFTAQKIVQKMMEVIPYNINVMDEDGIIIGSGDIKRVGDAHEGARKAIENCAINEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D G++ G+N P+ L+ +++GVIG+TG P+ +R++ +LV +TA +++EQ++ Sbjct: 61 YDDK----EGMKPGVNEPIILKDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQAKANE 116 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + ++ L E E A+ G+D+ + +V+ G L Sbjct: 117 EVQNKRLNMQKFYQELAHRKNEYDEEFYEKAKSYGLDITKKCQTIVVD---GDLNSKEFK 173 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q N + I + E ++ +K+ Sbjct: 174 RICQGYSNYFDLENNKTVFFITNDHEY----------------------NTVLNNLKDSK 211 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + ++SLG ++ S A+ M G + P + Y Y++ + L + Sbjct: 212 VVN-KISLGG-QQDIAAV--SLENAQMAMEFGMKMKPSYKIYNYEEFKFFIHLSYDNKES 267 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L A L NN L TL A+ N + L IHRNTL YRL RI +LT Sbjct: 268 ----LVSLFANLDKSGNNIELIETLQAYIEENGDINNVANKLNIHRNTLNYRLERIHKLT 323 Query: 363 GLDLGNFDDRLLL 375 G + F + L Sbjct: 324 GKNPKTFLELFEL 336 >UniRef50_A6CKW2 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKW2_9BACI Length = 384 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 83/374 (22%), Positives = 166/374 (44%), Gaps = 11/374 (2%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + ++A I+ + ++ N+N+MD +G II S D +R+ +HEGA+ V + + I Sbjct: 1 MRITKELAFPIIQKLTNTMNYNMNIMDDQGMIIASSDPKRVDSIHEGAIEVQRSKKPLII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + G ++G+NLP+ EI+G +G+TG+P+ + + ++ +T E+ML+Q+ L Sbjct: 61 ETKESSRFVGAKEGVNLPIEFMNEIIGTVGITGKPDQVMELVQMTKITVELMLQQAYLQQ 120 Query: 124 LLAQDSRLREELVMNLIQ-AEENTPALTEWAQR-LGIDLNQPRVVAIVEVDS-GQLGVDS 180 + + +M LI + L AQ L ID ++ V ++E+ + L Sbjct: 121 QSHFEQQQLHSWIMELINPDTFDEKKLANHAQHFLKIDFDRAYAVILMEISALNALDPLK 180 Query: 181 AMAELQQLQNALTTPERNNL---VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + +L + + + L + E +++ + + K ++ + Sbjct: 181 DLIKRNELWDEINKDIKMYLTESAFMDLTKEGLIIICVEIPPYKSQVQLIEKFFNSIMKK 240 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + R++ G I +SY A+ ++ + K+ M + D + LLD Sbjct: 241 -NKKLYAETRIAAGGRHRLVSGIRKSYFEARQSLSLMKKFMDKKNISHIDDWGIIKLLDQ 299 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + ++ + + L TL F + T+K L IHRNTL YRL Sbjct: 300 VPVSFRKGFIEQ----YDIEKLPTELLYTLQTLFNCDHNLTLTAKTLHIHRNTLAYRLES 355 Query: 358 ISELTGLDLGNFDD 371 I ++ L+ + +D Sbjct: 356 IQQIMKLNPKSLND 369 >UniRef50_C5EM58 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM58_9FIRM Length = 375 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 83/382 (21%), Positives = 160/382 (41%), Gaps = 12/382 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + + + IV +II ++ MD II D +RIG+ HE + +L +G + ++ Sbjct: 1 MQISSSLGMSIVTEVKKIIHEDLTFMDKSCHIIACTDEKRIGDFHEASRKMLDEG-LKEL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G R GINL L +EG++VGV+G+TG E + +YG++V E++L +S L Sbjct: 60 TVPDDDTYQGTRSGINLTLEIEGQVVGVVGITGNEEEVSRYGQVVKKMTEILLLESYLKE 119 Query: 124 LLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 ++ R + + +E PAL + GID+ PR A++ + Sbjct: 120 EKIRERSARNRFLQEWLMTDELRMNPALVDEGISQGIDVMVPRRAAVLGHTGNPIMSQED 179 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + ++ + + N+ + +V++ E K + Q+ +++ Sbjct: 180 VERIEHRIRRILKEDMRNVSGSSGGSFIVLM-------SERSDEMAAKLIAQIQADIEKE 232 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 R + + G + Y A + G +S FY ++L + ++ + Sbjct: 233 CGYRLIAGVDSRTISGGQLKAGYFRAIKALN-GAAVQGDSGVAFYDSILLEIFINDIGQA 291 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + R + R L + + ++ L++H+NTL+Y+LNR+ E Sbjct: 292 TKEEFIQRVFKG-CSEKRMKEAVRILRVLYECDGSINQAAEQLYLHKNTLQYKLNRLKEK 350 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG D Y+A+ E Sbjct: 351 TGYDPRKLSAAPYYYLAIAFYE 372 >UniRef50_C4IGN6 Transcriptional regulator, CdaR n=2 Tax=Clostridium butyricum RepID=C4IGN6_CLOBU Length = 355 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 187/382 (48%), Gaps = 30/382 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ ++AQ IV + ++ NIN+MD G IIGS ++ RIG +H GA L++ + V+I Sbjct: 1 MLNKQIAQKIVDKISTVLPYNINIMDKEGIIIGSSNKNRIGTIHYGAAEALTEKKEVEIY 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + V+ G+N+P+ + EI GVIG+TG PE++ +G+++ +T+E++L + + Sbjct: 61 NED----EFVKPGLNIPIFFKDEIEGVIGITGNPEDISAFGKIIKVTSELLLSEQYSLKS 116 Query: 125 LAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + L+EE + I E+ Q + ID+ +P+ VA++ + + Sbjct: 117 ALKKEMLKEEFLYEWIYLKEKYNNEFILKGQSINIDILKPKRVALILHKNIKSST----- 171 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L++++ + ++ +S +++++ D ++ + R+E + M++Y Sbjct: 172 ILREVKRYIYE---DDYYIKLSDEKLILIL--------KDNKNFKNRIELISDNMEKY-- 218 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++++ + ++ +S+ A T+ + + F+ + L+++ + Sbjct: 219 -SVKIAVSS---SNENLNKSFIEAMDTLNIISAVYKSKKILFFDSI---RLINNSIMNLN 271 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +E+ + +L + L TL + N + S+ L IHRNTL YRLN I E+TG Sbjct: 272 YSEIEKMKNKLYEQNGGKELLETLLKFIEFNGEKNKVSEILHIHRNTLNYRLNNIEEITG 331 Query: 364 LDLGNFDDRLLLYVALQLDEER 385 L L ++ D L + + Sbjct: 332 LKLNDYMDLYQLILFFLCIRMK 353 >UniRef50_Q2RGM2 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGM2_MOOTA Length = 553 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 77/393 (19%), Positives = 150/393 (38%), Gaps = 20/393 (5%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRER---IGELHEGALLVLSQGRVVDI----DD 65 +I ++ +++ D R I S R A LV ++ + + Sbjct: 159 EIARTLAGLLGLPVSIHDPAFRKIASWLAPRDFGADNNRALAELVNDSKQLAEACKCGRE 218 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGE--LVCMTAEMMLEQSRLMH 123 + + G I P+ + EI + + G + + + + + LE S+ Sbjct: 219 QLVFNCAGGLYAICRPVTVAEEIYAYLFIWGPQKPISEREITGIEQAVTVIALEISKQRA 278 Query: 124 LLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS-- 180 + +SR + + L+ + + A+R G ++ V + E D Q D Sbjct: 279 VFDVESRFKSSFIEYLVDGKITSKEDAIILAERFGWEIANGFTVMLFECDDLQSLYDQEP 338 Query: 181 ------AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 + ++ + A+ + + V MV+ +P + + Sbjct: 339 VFARKKRLKIMEIVNTAVVSLSPGSAVVERGRRLMVLHRPLPGKDIKQLRRNSETLARSC 398 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 + + R V + + P IA + + +G++ + + + DL + + Sbjct: 399 CEELAKRLDTRILVGISRFIADPMKIAEGINQSHQALEIGRRAYERGQVFHFDDLGVYRI 458 Query: 295 LDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 L + L +L + D N L TL F +++ T+ ALFIH NTL Sbjct: 459 LLTSDAAEMQRFYDDILGQLVSYDEENKAGLITTLEMLFANDMNLQKTADALFIHYNTLR 518 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 YR+NRI ++TGLDL + DDRL L +AL++ + Sbjct: 519 YRINRIQQITGLDLKSPDDRLSLQLALKILHMK 551 >UniRef50_C6JN28 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JN28_FUSVA Length = 363 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 174/381 (45%), Gaps = 21/381 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ +A +I+ + II ++N +D G II S +R G H L + + + I Sbjct: 1 MNISVSLATNILNKMKEIIHQDLNYIDKSGIIIASTAPDRTGTFHAAGLKSIKEKTPIII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + HG R+GIN+P+ IVG IG++G+ + KYGE++ M E++++++ + Sbjct: 61 NSDD--EFHGSRKGINMPIYFNDTIVGAIGISGDKNEVEKYGEIIKMMTEILIKEAWIKD 118 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + + + ++ ++ D P V + +++ + + Sbjct: 119 SDIRAKEINRTFIERIVLG-------YDYDFFPTTDFTFPYAVVVGKLNKNNSFLVND-K 170 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L+N+L+ + N + +S E+++L + E+ K + QL ++ E + Sbjct: 171 IYDILKNSLSHNKNN--IYTISRNEIIILY------HFYKDENISKTIFQLQEKLLEKTK 222 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 L FR +G S+ SY+ AK + + + Y+ + L + +L+ Sbjct: 223 LDFRFGIGTKAFEYSSLKESYKAAKEILNFMIKFSIKKSVSEYEKMDLEFIFLNLKKSDI 282 Query: 304 ANELARPLARLKTMDNNG-LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 N R L + L + ++ +N L TS+ALF+H+NTL+Y+LN+I +L+ Sbjct: 283 ENFTNRILKNFTPKEIEEFSLL--MNSYEENNGSILHTSEALFMHKNTLQYKLNKIKQLS 340 Query: 363 GLDLGNFDDRLLLYVALQLDE 383 G D + D ++L +A +L Sbjct: 341 GYDPRHLKDFIVLSLAFKLQR 361 >UniRef50_A4XS86 Transcriptional regulator, CdaR family n=14 Tax=Pseudomonadaceae RepID=A4XS86_PSEMY Length = 371 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 184/371 (49%), Gaps = 15/371 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD+ +AQ IV R M I+ NINVMDA+G IIGSGD R+ HEGA LVL+ RVV+I Sbjct: 2 LELDSTLAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHTRHEGAQLVLANRRVVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D A L GV+ G+NLPL +++GV+G+TG+P+ +R Y ELV M AEM++E L Sbjct: 62 DAQAAACLRGVKPGVNLPLLHAEQLIGVLGITGDPDIVRPYAELVRMAAEMLVEHRVLQA 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +E + L+ ++ +L A+RLG+ L PR + ++ + + Sbjct: 122 ERHWQRHQQEAWLRQLLDPQQRLSSLEVEAERLGLQLTWPRQICLLRLVEEGDPLPRQAR 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L L + +L+A + E++ +P + + E Sbjct: 182 LLAAL-----GSKSEHLLAPLGRHELLWCRPYSAGRDD----------HAWLAQADEREW 226 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++L + + ++ + G R PE R ++L LP LL + R W Sbjct: 227 GIRSLALSDPLHDLAELRQASLVLRDLQAYGLARFPERRLLPLEELRLPTLLHAQRHSWL 286 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 PL R+ D +G LR TL AW H+ Q ++AL IHRNTL YRL RI EL+G Sbjct: 287 LQGWLAPLRRVLAQDPHGTLRATLEAWCAHDGQVQLCAQALGIHRNTLRYRLERIGELSG 346 Query: 364 LDLGNFDDRLL 374 LDL D RL Sbjct: 347 LDLDRLDQRLQ 357 >UniRef50_C2HJH4 Carbohydrate diacid transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HJH4_PEPMA Length = 360 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 167/378 (44%), Gaps = 19/378 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + A+ IV + +ID ++N D G II S + RIG HE A + Q + + + Sbjct: 1 MRISDHTAKMIVEKLKDVIDYDLNFFDQEGYIIYSTNSNRIGTYHEAAKECVKQNKTIFV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ + G ++GIN+P+ ++GEI+ VIG+TG + + KYG ++ E+++++ + Sbjct: 61 DNE--KEYVGAKKGINIPVTIDGEIIAVIGITGNKDEVMKYGNIIKKMTEILVKEQLVEK 118 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + + + L +LI L ++ ++ + V + + + + + Sbjct: 119 NKLKKKDMNKYLFESLIN------ELDDYGLYRYLESEDEKYVIVGKNSESRFLLKDSDQ 172 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L+N L+ NN V V E+V+L ++ D + ++ + Sbjct: 173 IYKILENNLS----NNFVYSVFYGEIVILANNVDKIIIKKKLDKIR------NQIHDAID 222 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 R + F ++Y + + Y L L +LL S++ D Sbjct: 223 SRVYFGISGSFKMINQFKKNYDNCMVALDWLDNLQRKDCVVDYSTLDLGILLGSIKKDRI 282 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L + D N + + + +N ++ LF+H+NT++YRLN++ ++TG Sbjct: 283 KKFKEVVLKDISDEDYNI-YKDLIKIYATNNQSITKCAEDLFVHKNTVQYRLNKLRDITG 341 Query: 364 LDLGNFDDRLLLYVALQL 381 LD N +D + LY+A L Sbjct: 342 LDPRNVEDFIRLYLAFIL 359 >UniRef50_D1Y4D2 Putative transcriptional regulator, CdaR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D2_9BACT Length = 385 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 16/384 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ A IV II ++N+MD RG II S D ER+G H GA +L QG ++ Sbjct: 1 MNISHDSAMRIVTEMSSIIGHDVNMMDERGVIIASTDPERLGAFHGGARELLRQGLG-EL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G RQGINLP+ EG GVIG+TG E +++Y +++ E++L S Sbjct: 60 VVTCDGEYPGARQGINLPVCFEGATAGVIGITGRGEEVQQYSQIIKKMTEILLLDSWGER 119 Query: 124 LLAQDSRLREELVMNLIQA--EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + + + + + + E T E LGIDL +P + +V ++ D Sbjct: 120 QKQLRAAMWSQFMEEWLFSAEELITDRFVERGLELGIDLRKPFQIFVVALEGSAATADEQ 179 Query: 182 MA--ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 +++ A+ + + + + PA R A + V + Sbjct: 180 ERLGRVEEQIRAVVRASADGFYYKLPFRYVCFVSPASEEKLREMAGRIGENVAR------ 233 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 R + + + + A + + C FY + L +L + Sbjct: 234 --CGFRSFIGIDAEPVDCRHVRGACDRAGKALRAAVRNG--ECCAFYDGVDLEILAGEVP 289 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + +A + G + L+ +F N A +KAL +H+NT++YRL RI Sbjct: 290 LKARQDFIAHLFHG-CSERGRGEIMDFLSVYFHGNGSIQAVAKALCLHKNTVQYRLRRIH 348 Query: 360 ELTGLDLGNFDDRLLLYVALQLDE 383 +LT LD + + + +AL + + Sbjct: 349 KLTRLDPRDLRNAAVFEIALAIHK 372 >UniRef50_C1QDC2 Sugar diacid utilization regulator n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDC2_9SPIR Length = 387 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 91/381 (23%), Positives = 174/381 (45%), Gaps = 13/381 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+T AQ ++ + M + NIN+M+ G II SGD RIG++H GAL VL +G+ ++ Sbjct: 1 MPLNTITAQKLLKKIMDKLGYNINIMNEYGEIIASGDESRIGKIHSGALEVLKEGKDMEY 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + ++ + G+N+PL + EI+GV+G+TG P+ + K +V +TAE+++E+ Sbjct: 61 FDFIDNNIESAKPGVNIPLFINNEIIGVLGVTGNPKEVGKIAAIVKLTAEILIEKELDTD 120 Query: 124 LLAQDSRLREELVMNLI--QAEENTPALTEWAQRLGIDL-NQPRVVAIVEVDSGQLGVDS 180 + +I E P++ W ++ + N R+V +++ D+ + Sbjct: 121 KKILKQTSINNYINMMISKNNEHYIPSILIWLEKNNYQIENISRIVCLIKFDNNDYLDKN 180 Query: 181 AMAELQQLQNALTTPER---NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + + + + P ++++ E +++K + K L Sbjct: 181 RLNDY--IISKIKYPADFNSQDIISYFGDNEFILIKSFDKKQYGSERSILNKFFLNLKNS 238 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 L F+ S G I+ SY AK + Q +F +D +L + S Sbjct: 239 FDNKLGLNFKASCGAVSKNINEISSSYEQAKFVLNW-NQYSNSREVFFIEDYILEFYI-S 296 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + R + ++ NN + T+ ++N+ TS L +HRNT+ YR+ + Sbjct: 297 VNDQSSLKMILRNVLKIIK--NNSNFKETIITMSKYNMSIAKTSSKLSVHRNTIVYRMKK 354 Query: 358 ISELTGLDL-GNFDDRLLLYV 377 I ++ LD N DR+ ++ Sbjct: 355 IKDILNLDPINNNIDRIKFHI 375 >UniRef50_C4X8E2 Putative sugar diacid utilization regulator n=6 Tax=Enterobacteriaceae RepID=C4X8E2_KLEPN Length = 385 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 107/383 (27%), Positives = 184/383 (48%), Gaps = 15/383 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + T +A +IVAR M II N+NV+D G+II SG+R RIGE HE A V+ G+ + I Sbjct: 1 MIITTALANEIVARAMAIIHHNVNVIDHHGQIIASGERHRIGEQHEVAQEVIRTGKRICI 60 Query: 64 D-DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 + A A H V GIN P+ + +V V+G++G+P + +Y EL +TAE+++ Q+ M Sbjct: 61 NNAAEAARFHNVHPGINHPIIYDDRVVMVVGISGDPAAISRYAELAVLTAELLVRQAIEM 120 Query: 123 HLLAQDSRLREELVMNLIQAEENT--PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 RLR+ L ++ LG D + PRV +V V Q + Sbjct: 121 RETNWRQRLRDTLFCQYLEQGATPAGQEALHRLLELGFDFDTPRVPIVVTVQVEQHQLSD 180 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 ++ L + + L+ V ++ E+++L + E + +E +++ Sbjct: 181 ILSTLLREFSQLSGVSD---VILLGSHEILILNALSEAQ-----ETLLRGIEFVLS---- 228 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + +G I + R A++ + VG + P+ + Y+++++ + L L Sbjct: 229 NQISHYHIGIGVQADSAPDIREAIRFARSVIEVGSKVQPQRQIYYFREMAMLCLFRVLED 288 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + N + +L D+ +L TL+++ +N +P TS L IHRNTL YRL +I + Sbjct: 289 SYMVNFFINNVRQLLEHDSGEVLLDTLSSFIANNAEPGKTSLLLGIHRNTLTYRLQQIKK 348 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 LD F D L V++ Sbjct: 349 HIQLDPMVFTDLTQLAVSVHCYR 371 >UniRef50_C2HBS0 Sugar diacid utilization regulator n=10 Tax=Enterococcus faecium RepID=C2HBS0_ENTFC Length = 366 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 19/382 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 ++ ++A++IV ++ IN +D G II S D ERI LHEGA +VL + V I Sbjct: 1 MNISKQLARNIVKNLKDVLKQEINFIDTEGIIIASTDEERIRTLHEGAKIVLDTKKEVFI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G ++GIN P+ E I+ I + ++KY E++ E++++++ L Sbjct: 61 SED--GQFKGTKRGINAPVYFEQHII-GIIGLTGGKEVKKYAEILKKMTEILIKEAYLKD 117 Query: 124 LLAQDSRLREELVMNLIQ--AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 Q + +L+ + ++P L E +D + P V + ++ Q Sbjct: 118 FTFQLRERHRLTIESLLFPFSHFDSPHLIE------LDFSSPYYVVVGQLPDNQELYQEQ 171 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + L +L + + L V ++++L R ++++ T + Sbjct: 172 ITPLLELLERVFSYYSQAL-FTVHRQQIIILV------NRISRALLISLLDKVQTNFDKS 224 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 QL+ +G+ +S+ A+ + F++DL L +LL ++ Sbjct: 225 YQLQLNFGIGSLCYTEQETPQSFLHAQHACEWITFHQSVNEIRFFEDLDLGILLPAIPSG 284 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 ++ + R L L + + L ++TL + ++N ++ LFIH+NTL+YRLN++ L Sbjct: 285 QRSLYVNRILKSLTEEEVH-LFKKTLTCFSKNNGSIKKCAEELFIHKNTLQYRLNKLHSL 343 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG + N+DD L+L +A L + Sbjct: 344 TGYNPRNYDDYLILKLAFLLIQ 365 >UniRef50_C5VPL2 Transcriptional regulator, CdaR n=5 Tax=Firmicutes RepID=C5VPL2_CLOBO Length = 351 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 89/382 (23%), Positives = 168/382 (43%), Gaps = 34/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++A+ IV R M ++ NIN+M+ +G II SGD+ RIG+LHEGA+ + + ++ I Sbjct: 3 KLTKQIAESIVDRMMNVVPYNINIMNNKGVIIASGDKSRIGQLHEGAVDAIKRDKLNLIY 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 G + G+N+P+ ++GVIG++G P + + +V TAE++++Q + + Sbjct: 63 KDNG----GAKPGVNMPIYFNKNLMGVIGISGNPNEVVSFASIVKATAELLIKQDYMFNE 118 Query: 125 LAQDSRLREELVMNL-IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 ++ EE + + + ++ LGIDL+ R+ IV + ++ Sbjct: 119 RRIREQIEEEFLYQWSYLDRKYDEGFIQRSEVLGIDLSVKRLAVIVIGEDKSRIMNIIKN 178 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + + + + L+ + S E+ + + + Sbjct: 179 YIYSCEYTIRFNAESILIFMKSDKELF----------------------KRVLSLYNKLG 216 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ +G + S R A + + + Y ++ ++ + + Sbjct: 217 GNVKIGVGLEEEIMTN---SVREALRAIEINNKLSLNYDICKYSEVSFIDIISNNIRYEE 273 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L L K +D L +TL + N + ATS+ L IHRN+L YRL +I E+TG Sbjct: 274 NINLIEKLKSFKNLD----LVQTLILYIMLNCEITATSEKLHIHRNSLSYRLKKIYEVTG 329 Query: 364 LDLGNFDDRLLLYVALQLDEER 385 D N D L L++A L + + Sbjct: 330 KDPKNIMDLLQLFIACILYKLK 351 >UniRef50_C5EEN5 Transcriptional regulator n=3 Tax=Clostridiales RepID=C5EEN5_9FIRM Length = 385 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 91/387 (23%), Positives = 152/387 (39%), Gaps = 17/387 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 +G L + AQ IV ++ NIN+MD RG +I S D RIG LHEGA ++ + Sbjct: 3 SGLKLSRQGAQSIVEEVGAVVGQNINMMDRRGYVIASTDETRIGSLHEGARKLIGEHLP- 61 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 ++ R G+NLP+ G IVGVIG+TG + YG++V E+++ ++ Sbjct: 62 ELYVETEHATSTSRPGLNLPITHGGSIVGVIGITGLYGEVVGYGQVVKKMVEILIRENAE 121 Query: 122 MHLLAQDSRLREELVMNLI--QAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 R+ + + + L E LGID+ PR V + + Sbjct: 122 QDERRMGQRVLNRFLEDWVIGSGLMQPRILEERGFALGIDIAMPRRVMVASARELEEYAS 181 Query: 180 SA--MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 +A L+Q++ + + + S ++L + + ++ T Sbjct: 182 TASGQKLLEQVEREAASLAGKGSLVLRSGGRQIILV------KKCPDRQMEQLAGRIRTA 235 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + +R V + I +Y A + Y + L L Sbjct: 236 VFKKFNIRMVVGIDGRA---EDIHVAYGQANKAWRSAGLAKKD--ILAYDSVTLE-LFTE 289 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 GD E L + + L A+F A S+ L +H+NTL YRL R Sbjct: 290 DLGDGVKAEYIHKLFKKCGYEELCQWMGLLEAYFEAEGSLKAASEKLHVHKNTLTYRLKR 349 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDEE 384 + ELTG D+ + Y+A+ + Sbjct: 350 LEELTGYDVRLVSQSTVFYMAMLFFRD 376 >UniRef50_D2QB04 Transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2QB04_9BIFI Length = 413 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 159/413 (38%), Gaps = 43/413 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +D +A DIV + IN + G II S D RIG H+GA L ++ + V + Sbjct: 6 MEIDPNIATDIVTHLKDALRHEINFFNTSGIIIASTDPTRIGSGHDGARLAIASKQTVCV 65 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 DD G R GIN+P++ +GE V VIG+TGE + + +G ++ E+++ + Sbjct: 66 DDE--HRFAGARNGINVPVQFDGEPVAVIGITGERDEVEPFGTVLQKMTEILIREHLDQL 123 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +R+ L+ L N A LGIDL+ P ++A + + Sbjct: 124 ARFNRRTMRDSLITALAYGSGNVADNERLAAMLGIDLDLPCMIASIRGVDPHDLLTYQER 183 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + L + R +++A ++ E +++ D E + + + + Sbjct: 184 IVSALDRQVE--GRPDVLATLTPQECLLVIVGS------DDETAESTIRAAESLISSFTG 235 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR--------------------- 282 +G + RSY A + G R Sbjct: 236 HATHCGVGGRASTMHDCRRSYDQAVAALRWGITAHASPRPASDERDNASPRTRIASTELQ 295 Query: 283 -----------CYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWF 331 Y+DL L +++ + + L + T A+ Sbjct: 296 HCDDENTSLSTFTRYEDLDLGLIVPVIPPEQAQALTRLVFGGLDDGVIDA-YEITFDAYT 354 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 RHN A +K LF+H+NT++ LNRI+ +TG + N +D +L +A L Sbjct: 355 RHNGSISAAAKELFLHKNTMQNHLNRIAAITGYNPRNLNDHTILALAFLLRRH 407 >UniRef50_Q4A0R8 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R8_STAS1 Length = 405 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 98/378 (25%), Positives = 174/378 (46%), Gaps = 22/378 (5%) Query: 4 WH--LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 L ++A IV T++ ++NIN+M+ G II S D+ RIG++HEGA VL+ G +V Sbjct: 46 MMNVLTDELAALIVEETVKRTNSNINIMNFNGEIIASFDKRRIGQVHEGARKVLASGDIV 105 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 + + +L G + GINLP+ + +VGVIG+TG+P L +LV M+ E++L Q+ Sbjct: 106 ILSEEETSYLQGTQPGINLPIIFQDNVVGVIGITGDPSALVHVADLVKMSTELLLYQNYF 165 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + L R +E L+ L+++E + + ++L + R I+ ++ S Sbjct: 166 TYELEGQLRSQELLIEELLKSEPSQSFIQYLTKQLNVAFLTYRKCIIINLEKQIFSRSSI 225 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + L ++ + VA + +V+L + + R+ Q+ T + Sbjct: 226 VQRLAKIMDK-----ATFAVAFTNYNHIVIL---ATDELQDELNQKIYRIHQVFTSL--- 274 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 L R++ FT +Y + ++ ++D+ LL + + Sbjct: 275 -NLDVRIASSLVFTSLNDFKNAYEECELVFML---NEENVSFASFEDVEEKTLLYQINEE 330 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + R L L TL + F +++ T+K L+IHRNTL YRL + Sbjct: 331 IRERYKKRILGELDNQS-----IETLKSLFENDLNIAQTAKYLYIHRNTLLYRLEKCKLQ 385 Query: 362 TGLDLGNFDDRLLLYVAL 379 TGL+ + D + L +AL Sbjct: 386 TGLNPKKYSDAIKLQIAL 403 >UniRef50_A6M1V5 Transcriptional regulator, CdaR n=2 Tax=Clostridium RepID=A6M1V5_CLOB8 Length = 342 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 39/373 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L +AQ IV M +I NINVMD G IIGSGD +RIG LHEGA + ++ ++ Sbjct: 1 MTLSKTIAQKIVLEMMNVIPYNINVMDESGIIIGSGDSKRIGNLHEGARKAIDNQQINEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + R ++ G+N P+ + +++GVIG+TG P+ +R++ +LV +TA +++EQS+ Sbjct: 61 FEEDDR----MKPGVNEPIIINDKVIGVIGITGHPDEVRRFSKLVRVTAVLLIEQSKADE 116 Query: 124 LLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + ++ L + + + A+ GIDL + V +V+ + Sbjct: 117 EIQNKRLSMQKFYNELAHRKTKYDENFHQRAKSYGIDLTKKCRVILVDGNINS------- 169 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + + + + + L+ +K Sbjct: 170 -------RSFKILYQKYSSYSEVDNRIAFFVTS------------KDLYNGLLENLKTNK 210 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 ++ R+S+G +I S +A+ M G + S Y Y +L + L D Sbjct: 211 DVK-RISIGAM-EDVAAI--SLESAELAMEFGAKIKSSSLVYSYDELRFFI---KLSHDN 263 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L ++ L N L +T+ A+ N + L IHRNTL YRL +I +LT Sbjct: 264 KLP-LISMMSNLDKAGNKLELIQTIQAYIEENGDIGNVANRLNIHRNTLNYRLEKIKKLT 322 Query: 363 GLDLGNFDDRLLL 375 G + N + L Sbjct: 323 GKNPKNLLELFEL 335 >UniRef50_Q2RIP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIP6_MOOTA Length = 403 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 77/381 (20%), Positives = 143/381 (37%), Gaps = 10/381 (2%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 I + + + D RI+ S LH G L++ R L Sbjct: 21 SIARYLAEVSGRPVVICDLTLRILAS-QALPSKTLHFGDYLLVELPRETVEGAFYRGRLQ 79 Query: 73 GVRQGINLPLRLEGEI--VGVIGLTGEPENLRKYGELVCMTA-EMMLEQSRLMHLLAQDS 129 G + GE+ G + L E+ R Y E + A M+E SR + Sbjct: 80 KTGTGTPFLMLPIGEVTLYGYLFLLEVGEDWRPYREPLKAAALAAMIEMSRARIAQETER 139 Query: 130 RLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV--DSAMAELQ 186 R R E + +++ A+ + G DL +P ++ ++ +D ++ + Sbjct: 140 RYRNEFIQDILYNNLPNREAMVNRGRLWGWDLTRPHLLVVLSLDRQAQQERDETLWERWR 199 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG-QLR 245 QL + ++ ++++L P + + ++ L + Sbjct: 200 QLMQYHLKHQAPEIILADRGDQLILLIPVVTDELGVNKGKIAGLIKSLQKSTAAHLEGRT 259 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 F G ++ + R+Y+ AK + + + F+ +L + L+ + + Sbjct: 260 FSAGAGRFYEDVTDLYRAYQEAKVALEISRLLRRRGTLTFFDELGVLRLIFNQGEQELED 319 Query: 306 ELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 L ++ D +N L TLAA+ + ++ +FIH NTL YRL +I EL G Sbjct: 320 YYEETLGAIQKYDAKHNTNLMETLAAYLYASGDHNRAAEDMFIHVNTLRYRLKKIEELLG 379 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 DL D ++ LY ALQ+ Sbjct: 380 QDLRRIDVQVNLYTALQVKVM 400 >UniRef50_B3G2C8 Sugar diacid utilization regulator protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2C8_PSEAE Length = 361 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 116/378 (30%), Positives = 192/378 (50%), Gaps = 21/378 (5%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + LD +AQ+IV R M I+ N+NVMD++G IIG+G+ ER+ HEGA LVL+ R V+I Sbjct: 2 FDLDHSLAQEIVDRAMAILPRNVNVMDSQGLIIGTGEAERLYTRHEGAQLVLANSRAVEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+A A L GV++G+N PL L+G+++GVIG++G P+ +R + E+V MTAEM++ Q Sbjct: 62 DNAAAGALRGVQEGVNFPLCLDGQVIGVIGVSGAPDEVRTFAEMVRMTAEMLVAQRNDQQ 121 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + E+++ ++ + ++ AQRLG+ + R ++E+ + + Sbjct: 122 HRIWLQKRIEDVLTAILLSGQSAQRAIVEAQRLGLRPDLRRTAVLLEMATPE-------- 173 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 +L + + + +V P R+ G Sbjct: 174 DLDLAAEWIRHQAADAWCVPLHALGLVWCPPRSAPPD-------------FRERVARAGI 220 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 RV++G T ++ M + +MP+++ +PV + R + Sbjct: 221 PFTRVAIGTPNTETKALHSEVEQLSDLMAYAQAKMPDAQWLDLAAHRIPVAVWRFRSENG 280 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 +LA P L+ D+NG LRRTL WF H A ++AL IHRN+L YRL RI++++G Sbjct: 281 FLQLALPYVALQQEDSNGQLRRTLKCWFEHGSDGQACAEALNIHRNSLRYRLERIADISG 340 Query: 364 LDLGNFDDRLLLYVALQL 381 +DL + LY+A+ L Sbjct: 341 VDLASPKGTTELYLAMIL 358 >UniRef50_C2EGK4 Carbohydrate diacid regulator n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGK4_9LACO Length = 392 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 161/374 (43%), Gaps = 41/374 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L TK+AQ IV R M+ I NIN+M+ G II SGD RIG+LH A+ VL + ++ Sbjct: 35 VFHMELSTKLAQVIVDRMMKTIPYNINMMNDEGIIIASGDHTRIGKLHTEAIRVLRKNKI 94 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + + V+ G+N+P+ + +GVIG+TG+P+ + + L+ + E++LEQ Sbjct: 95 LKFSHNDPKE--NVQPGVNIPVNFHDQTIGVIGITGDPQEVTPFALLLKSSTELLLEQQS 152 Query: 121 LMHLLAQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 + + Q + + T L + A L ID R V I++ + +L Sbjct: 153 FQQIEENKQNKLTRFLFRWTQKDIDFDTTQNLEKEALELNIDFYFERTVVIIKCSAKKLL 212 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + L ++ T++++ K + + Sbjct: 213 DLRLEQDNFHLNRSV-------------NTQVLI----------------CKDLSTVKKC 243 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + +RV +G+ G +S+ A+T + + + +Y+++ L Sbjct: 244 INFAHNHNYRVGVGSTTKNIG---KSFYEAQTVIKISTLL--DKDYIYYREVKFIQQL-- 296 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 L D L + L ++ L TL + +++ T+ L IHRNTL YRL++ Sbjct: 297 LTSDLADKTLVEKFSMLDNTESGTDLLNTLLTYLKNSGNMNKTASDLHIHRNTLLYRLSK 356 Query: 358 ISELTGLDLGNFDD 371 I L GL+ F D Sbjct: 357 IHNLIGLNPHKFTD 370 >UniRef50_C4G5I7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I7_ABIDE Length = 366 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 85/380 (22%), Positives = 176/380 (46%), Gaps = 24/380 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + +A +IV + + +IN ++ +G I S D+ R+G+ HE + G+ ++++ Sbjct: 4 IISGILADEIVLAVKDVCNHDINFINPKGIIFASTDKNRVGDYHEIGKQAAATGKTIEVE 63 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + G + G+N+P GE++ VIG++G P+ +RK+ L + ++L ++ L + Sbjct: 64 PSD--NFSGSKPGVNIPFIFHGEVIAVIGISGIPDEVRKFAYLAQRISGIILRENELERI 121 Query: 125 LAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 +L+ +I E L ++ I +V++D+ + ++ Sbjct: 122 EQIQKTQLNQLIRAIIHKEHINQEYLESILKKEKISDCVEYNTIVVKIDTKYNPENISLI 181 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 E + + ++ +S +++L+ K L TR+ + Sbjct: 182 E-NAVYSCFEQTGSRLFISNLSNEFVILLESIK-----------IKNYIGLFTRLANRYE 229 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 +V +GN + RSY+ A+ + M + Y DL L +LL ++ + Sbjct: 230 PIVKVGIGNSYPILKQY-RSYKNARLAINC---MMGDETLAIYDDLNLEILLGNISEEAG 285 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + R L+ L D + L +F N+ TS+ L+IH+NTL+Y+L++I+ LTG Sbjct: 286 SLFVKRNLSALDEEDRS-----LLKIYFGSNMSLKETSEKLYIHKNTLQYKLDKIARLTG 340 Query: 364 LDLGNFDDRLLLYVALQLDE 383 + F + +LY+AL+L++ Sbjct: 341 CNPRIFTEANVLYMALKLEQ 360 >UniRef50_UPI0001C35A60 transcriptional regulator, CdaR n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35A60 Length = 379 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 89/384 (23%), Positives = 162/384 (42%), Gaps = 15/384 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + +A+ IV I+ N+N+MD GRII S +R+G H GA ++ + ++ + Sbjct: 1 MRITQDVAKTIVNEISNTINKNVNLMDETGRIIASTASDRVGTFHRGAQKIVEE-KLDCL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G R GIN+P+ +G IVGVIG+TGE + + +Y +L+ E++L +S L + Sbjct: 60 TIYTDQEYSGSRMGINMPIYFQGGIVGVIGITGEWDQISQYVQLIRKATEILLMESYLKN 119 Query: 124 LLAQDSRLREELVMNLIQAEEN--TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG--VD 179 D R E V L+ E + ++ +GID R V G G Sbjct: 120 RELHDEASRREYVYKLLFEEFDRIPEQFYQYGFSIGIDAVLARACLTVSFKDGSRGERPK 179 Query: 180 SAMAELQQLQNALTTPERNN--LVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 L + + + ++ LT++ + P D+E+ ++ E + R Sbjct: 180 QIYEYLDMAEKKVHEYQAEAKQILVYRELTQLSIFIPGK------DSEEVKRTAEDIRKR 233 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + + + L I Y A +++V + Y L L + +D Sbjct: 234 ITLPEGIEIKAGLDESLYSGADIRSGYTKACKSLLVAMASN-DRWLVCYNQLTLGLFVDE 292 Query: 298 LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + + R A + + L ++R T+ LFIH+NTL+Y+L + Sbjct: 293 VSRATREEYVKRIFAFISDEEIAK-WVSLLEVFYRCEGSITETASELFIHKNTLQYQLKK 351 Query: 358 ISELTGLDLGNFDDRLLLYVALQL 381 ++ +TG D + L A++ Sbjct: 352 LASITGYDPRSLSCAGLYQTAIKF 375 >UniRef50_C9KL12 Sugar diacid recognition family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL12_9FIRM Length = 379 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 160/385 (41%), Gaps = 18/385 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L + A+ IV ++ IN+M+ G II S D ERI H GA V+ + + ++ Sbjct: 1 MELRVQQARAIVHEINTVLPQKINLMNKDGIIIASTDPERIHTFHGGAARVIREN-LDEL 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 G R G N L++EG +GV+G+TG E++ ++ E+++ + Sbjct: 60 RIYRENEYPGTRPGTNFMLQVEGVPIGVLGITGSYESILPIANVIRKMTELLVHEQEYQR 119 Query: 124 LLAQDSRLREELVMNLIQAEEN--TPALTEWAQRLGIDLNQPRVVAIVEVDSG--QLGVD 179 + R + L++ E + E A+ L IDL+ PR + + ++DS + Sbjct: 120 MQTHLQYQRHLFLQELLEHSETFLSKEQIERARLLDIDLSVPRRIVVADLDSPVSPERHN 179 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 ++L+ + R +S +M+V + E R E+L K Sbjct: 180 EVFSQLEMEAQRIDAACR-----AISTNQMIVFLTDIRPQ-----EQLRSFAEKLFVYAK 229 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 +G + + L + + +++ A+ + R Y ++ + + D + Sbjct: 230 SHG-IGLCLGLDSPAPDNTRLRQAFEQARKAL-YSCHRKGTVHIKGYDEINMELFADLIP 287 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + + ++ TL +F H+ + T+ AL+IH+NTL+ L +I+ Sbjct: 288 LTAKREYVKKIFHGYTPLEL-ADAVHTLECFFEHDGSIIRTADALYIHKNTLQQHLRKIA 346 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEE 384 TG D + + YV L ++ Sbjct: 347 ARTGYDPRSLRSSAVFYVVLYFYQD 371 >UniRef50_B8G125 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8G125_DESHD Length = 555 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 67/391 (17%), Positives = 145/391 (37%), Gaps = 23/391 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 I ++ + V D + + S + + I E L + + Sbjct: 157 ICQTLEELVGNPVVVYDKNFKCLQSTNPQ-IERFEEPEEFALRENLNDKFSYYRQSVCYP 215 Query: 74 VR-----QGINLPLRLEGEIVGVIGLTG--EPENLRKYGELVCMTAEMMLEQSRLMHLLA 126 + +P++ ++ G + + +P + + L+ + + Sbjct: 216 DLDGRCIPQVVVPIQAFNQLKGYLTIVELNKPIVEMDFISIEQAATVTTLDMVKRFAVKE 275 Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQ 186 + + + +L+ +++ E ++ E + DLN+P V + ++ + + + Sbjct: 276 VEYKFKNDLIEHILSGELSSTNAQERINLMEWDLNRPYYVVLFDLKNLDAYHVEHRTQQK 335 Query: 187 QLQNALTTPERNNLVAIVSL-----------TEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 ++ + + + ++ +V+L P + E +K +Q Sbjct: 336 MALQSIKSEITSTISGVIKTRTRDFIIGNKVDIIVLLWPVAANPQENSLEKIKKIAKQAQ 395 Query: 236 TRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 ++K+ +L V +G+ G I RSY+ A + G ES + +L + + Sbjct: 396 EQVKKRMKKLIVEVGIGDLAHGAEEIPRSYKEALDALSYGGMISNESAIVAFSELGVFRI 455 Query: 295 LDSLRGDW-QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L + + L R+ D N L +TL + N +K LFIH T+ Sbjct: 456 LCKFAERNSLEEFIPKALLRILRYDKDNEAELLKTLEVFLECNGNASRAAKELFIHYKTI 515 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 YRL RI E+ LDL + +RL L + L++ Sbjct: 516 LYRLERIKEVGQLDLEDSKNRLELEMGLKML 546 >UniRef50_A9KJ64 Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJ64_CLOPH Length = 386 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 83/384 (21%), Positives = 156/384 (40%), Gaps = 9/384 (2%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++A +IV +I IN+M+ +G II S D+ RIG HEGA+ ++ + +V ++ Sbjct: 1 MILSVQIASNIVREVNSVIPLKINIMNEKGIIIASSDQPRIGRFHEGAMHII-ENQVDEV 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 +G QGIN PL+L+G I+GV+G+TG+ E + ++ E++LE + + Sbjct: 60 TVHYDGEFNGALQGINYPLKLQGYIIGVLGITGKYEEIASSALIIKRMTELLLENTYSVE 119 Query: 124 LLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD-S 180 + + + E T + LG D+ PR + + G + Sbjct: 120 QRQLKENVYTRYLSEWLNGEAKNITTDFVRRGKVLGFDITIPRRILVCSFYHSNQGENLQ 179 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 +M +++ + L + + L A+ S +L +++E Sbjct: 180 SMQVIEEAEKYLKKRVASKDSLNLYYKAGSTLVCAVTS---TTDMSVVSLANELKKQVEE 236 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +R + + + + A+ R + Y DL + V D + Sbjct: 237 KFSVRLVIGIDSSVENFAFAQTALIRAQKANK-ACMRTQKRDIQLYDDLNMEVFTDEISE 295 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + R + + L ++ S+ LFIH+NTL+ +L RI+E Sbjct: 296 LSKQEFVHRIFKGFNNEEIRNSMV-LLETFYDMEGSIQKVSEHLFIHKNTLQNKLKRIAE 354 Query: 361 LTGLDLGNFDDRLLLYVALQLDEE 384 TG D + L Y+A+ + Sbjct: 355 RTGYDPRSIRHSSLFYIAIYFYRD 378 >UniRef50_Q38XR5 Putative uncharacterized protein n=2 Tax=Lactobacillus sakei RepID=Q38XR5_LACSS Length = 345 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 89/385 (23%), Positives = 167/385 (43%), Gaps = 43/385 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +D +AQ +VAR R I NINVM+ +G II SG+ R+G+ H GA+ + + I Sbjct: 1 MEMDKVLAQKVVARLHREIPYNINVMNQQGTIIASGEPSRVGQSHPGAIEAIQGQKTNII 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G +G N+P+ ++ E++GV+G+TG PE L LV +T E++ EQ+ Sbjct: 61 EQD---QPDGTLRGFNMPIVVQNEVIGVVGITGAPEKLTYIAPLVKVTTELLTEQALADQ 117 Query: 124 LLAQDSRLREELVMNLIQAEEN---TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 +L++ R E + + + ++ TP + A LG+++++ +++ Sbjct: 118 VLSRAKRRLERFLFDWLAIQDPAALTPDFVQEANALGVNIDEQYQAMVIKTPHLLPETVE 177 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + ++ E+++L ++ E L + Sbjct: 178 VGSYKLRIT----------------PDELLIL---------------TRQAEVLAHWHQN 206 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +++ V + ++ + + A+ + + + Y + LL Sbjct: 207 AKEVQAAVGISQPQK---LVSEALKQAREVIKYNQGTNQKLLYYTAEVNYAYRLL---SA 260 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D +E L D+ +L T +FR+N + T+ L IHRNTL YRL +I + Sbjct: 261 DIVVDEYVEKFRVLAQTDSGQVLITTFQKYFRNNGNIVETAHQLHIHRNTLNYRLGQIKD 320 Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385 GLD +D+ ++LY A E + Sbjct: 321 KLGLDPKRYDELVILYTAFLNYELQ 345 >UniRef50_A6NZ16 Putative uncharacterized protein n=9 Tax=Bacteria RepID=A6NZ16_9BACE Length = 363 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 156/382 (40%), Gaps = 32/382 (8%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ--GRVVDI 63 + +++ Q +V + D I V+D+ G ++ + IGE GA+ ++ +V Sbjct: 1 MSSRIFQSVVLQMKESSDRAIGVIDSEGTVVACNELTNIGERWPGAVETVNAAGNEIVTF 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + L G + + + GE + L+C A + L ++ Sbjct: 61 EGKTFKALTGWGAQFDYAVFVRGE--------------DDHARLICSMAAVALNGAK--- 103 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 ++ + V N+I + A+ L PR V ++ + + Sbjct: 104 TYYEEKHDKATFVKNIISDNILLGDIYVRAKELHFVSEVPRAVFLIR-----QVGSTDVG 158 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + +Q+ + + +++I ++ +++D K +Q+ + E Sbjct: 159 AIDVVQSLFPEKQVDFVLSISETDVALI----KQLSDTTESKDLYKVAKQIEDALAEELN 214 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 ++ + +G + +AR+Y+ A+ + VGK E Y++L + L+ L Sbjct: 215 VKAVIGIGTIVSHIRDLARAYKEAQVAIDVGKVFDTEKSIINYENLGIGRLIYQLPTTLC 274 Query: 304 ANELARPLA--RLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L + +D T+ +F +N+ T++ LF+HRNTL YRL +I +L Sbjct: 275 EMFLQEVFKKNPIDALDQET--LFTINKFFENNLNVSETARKLFVHRNTLVYRLEKIKKL 332 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TGLDL FDD + VAL + + Sbjct: 333 TGLDLREFDDAITFKVALMVKK 354 >UniRef50_C2EWT0 Carbohydrate diacid regulator n=2 Tax=Lactobacillus reuteri RepID=C2EWT0_LACRE Length = 352 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 43/381 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV M I NIN+M+ +G II SG++ RI LH GA+ + Q + + + Sbjct: 1 MELKPELAQSIVDHMMTQIPYNINIMNKKGYIIASGNKSRINTLHVGAVDAIKQRKTLPM 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + H + G+N+PL+ + EI+GV+G+TG+P + L+ E++L+Q + Sbjct: 61 EQQYGNH---GQPGVNMPLKFKNEIIGVVGITGDPNKVTPLASLLKTAVELLLQQKQENE 117 Query: 124 LLAQDSRLREELVMNLIQ-----AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + ++++ + I + L E A RL I+L + R+V + S Sbjct: 118 QEHEIEKVKQRFIYRWINVSKYQNPQLDSELVEEANRLNINLAKQRLVIAIAGSS----- 172 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 Q+ L + + ++ + E+++L K E I + Sbjct: 173 --------QIIKNLKLDQETIIFSLTNHIELIILSS--------------KHQETYIQQK 210 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 E+ ++ + + N+ G +A A TT+ + S ++ Q + +LDS Sbjct: 211 LEHQEIEY--GISNWGNLLGRLA---EQAVTTLRLSNIFGKPSFRHYSQVSFIKQVLDS- 264 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 D + L + L T+ + + N+ T+ LF+HRNTL RL RI Sbjct: 265 --DLNLIAVNDQYEALLKRKDGKELIDTIREFIKCNMSVNQTAHNLFVHRNTLNNRLLRI 322 Query: 359 SELTGLDLGNFDDRLLLYVAL 379 +L LD N +D L++ Sbjct: 323 KKLFELDPKNTEDLFQLFIGY 343 >UniRef50_D1CDQ9 Transcriptional regulator, CdaR n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDQ9_THET1 Length = 388 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 163/405 (40%), Gaps = 47/405 (11%) Query: 2 AGWHLD--TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR 59 G D ++A +V + ++D + V D RG +I S DR +G+ Sbjct: 1 MGMEQDYFREVANTVVKKIGSLLDQQVIVADDRGWVIASTDRRFMGK------------- 47 Query: 60 VVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 + + + +P+++ + G + + + + EM++ Q Sbjct: 48 -----NLDTSPSRRMLHQLRVPIKIRDKC-GQLMIIESNKPSVP-PRMAEALVEMVINQI 100 Query: 120 RLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVE-----VDS 173 L+ L S L+ +L+ +L+ + + AQ LG+DLN PR V +++ + Sbjct: 101 MLVESLPNQSDLKNKLIYDLLHGNSSDETSIIRQAQILGMDLNLPRAVLLIDASKYILGG 160 Query: 174 GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSF-------------- 219 + + + + + + + E+VVLK + + Sbjct: 161 DDRQLQQKVNTIIRSIVDFFMLPSDTICGYIGEGEVVVLKASSSRDLANWLRPKEKLDTS 220 Query: 220 --GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQR 277 + ++ L+++++ + + +G Y G + SY+ A+ + +G + Sbjct: 221 PSSWANLAALKRAANALLSKLRSETKQPITIGIGRYHPGILGLTASYQDARAALSLGLKF 280 Query: 278 MPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQP 337 ++ + L +P + + + L L+ L +TL +F N P Sbjct: 281 YGPNKVHCLDSLGIPAFVGISDERTKNDLATHLLKPLEKY---PELMQTLEVFFDENCCP 337 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 + SK L IHRNTL YRL++I+ LTGLD +FD + L +AL L Sbjct: 338 TSASKKLCIHRNTLTYRLDKIASLTGLDPRDFDSAVQLRLALTLK 382 >UniRef50_C8P5T7 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P5T7_9LACO Length = 350 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 173/380 (45%), Gaps = 41/380 (10%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV M I NIN+M+ G II SGD RI LH GAL + QG+ + + Sbjct: 1 MKLKPELAQSIVDHMMSQIPYNINIMNENGYIITSGDPTRINTLHIGALDAIRQGKTLPM 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + +H + G+N+P+ + +I+GV+G+TG+P + L+ E++L QS Sbjct: 61 ERLHGQH---GQPGVNMPITYDDQIIGVVGITGDPAKVVPLASLLKTAVELLLRQSTAAQ 117 Query: 124 LLAQDSRLREELVMNLIQA---EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + ++ ++ + +LIQA + T L A++ +DL Q V ++ Sbjct: 118 RKQESAQNQQRFLYHLIQATQTQAPTSELIATAKQFKLDLTQAHTVIAIDC--------- 168 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 +L +L L N ++ + + +V++ D R+ ++L + ++ Sbjct: 169 ---QLNELAR-LNNDPANLMLMLTNRVGLVIIH---------DPLTCRRLQKRLASAHRQ 215 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +G + +G T A TT+ + +Q + + Y+ + LL LR Sbjct: 216 FGVSESGILIGKAVT----------EAATTLRL-RQNLDDETITSYRQIRFYDLL--LRA 262 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + L T ++ L T+ + R ++ T+K LFIHRNT+ YRLNRI + Sbjct: 263 NLPVQGMVDRFNELATSNSGRELIATIWEFIRSDLNVNQTAKHLFIHRNTVNYRLNRIQK 322 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 + L N D L++ Sbjct: 323 IFKLTPQNATDLFKLFIGYL 342 >UniRef50_C0ZJB8 Putative transcriptional regulator n=2 Tax=Bacillales RepID=C0ZJB8_BREBN Length = 564 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 61/417 (14%), Positives = 153/417 (36%), Gaps = 38/417 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGD------------------RE 42 + L+ I + I+ I ++D ++ + Sbjct: 143 LFRIALEGGGLDRIASELSETINNPILILDQDWHLLHYTEIWHNPIPLDSCLTLSKNRPV 202 Query: 43 RIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR 102 + E +SQ + A+ ++ I LP+ + I G I + L Sbjct: 203 FTRDFTESVPRNISQIKKSIKRIYHAKDYE-IKCRI-LPVAVANHIYGYIVVWQTVWELT 260 Query: 103 KYGELVCMTAEMMLEQSRLMHLLAQDSRL--REELVMNLIQAEENTPA-LTEWAQRLGID 159 ++ +V A ++ R+ ++ +L R++ +L+ + + L G+ Sbjct: 261 EFDYIVLEQASTIVALERIKAREIEEVKLKIRQDFFDDLLTGKITSSDSLQTLCDLHGLQ 320 Query: 160 LNQPRVVAIVEVDSGQLGVDSAMAELQQLQNAL-----------TTPERNNLVAIVSLTE 208 + ++ ++ +L + + + + + ++ + Sbjct: 321 SSYMYFCMVMNIEPIELENLEDIIDRKYELDRIAKKCVDLVYDNSSKAPGEITCFYRNNR 380 Query: 209 MVVLKPALNSFGRWDAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 +++L A + ++ +L + + + + F + +G + S+ +S+ A Sbjct: 381 IIILIGQNEQKPVVSASEAKQFANELYSALVDKIKKTLFFIGVGRQYKNIASLHKSFTEA 440 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLL-DSLRGDWQANELARPLARLKTMDN--NGLLR 324 + + ++ + + D + L +++ + + L +L D L Sbjct: 441 HEAIRLMQKFNSKGDVSHFDDYSVYHFLGSNIKDIELEDFFLKRLGKLYEHDQEFGTSLM 500 Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 TL +F +N +KA+FIHRNT YR+ +I E+ +DL N ++ L + +AL++ Sbjct: 501 VTLDNYFLYNQNVSEAAKAMFIHRNTFIYRIEKIKEILNMDLKNSEEMLQIQLALKI 557 >UniRef50_UPI0001C35D6A hypothetical protein ChatD1_28549 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D6A Length = 360 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 152/381 (39%), Gaps = 33/381 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M +L+T+ AQ I M+II NIN+ D G I+ SGD+ +G LH+GAL L + Sbjct: 1 MYENYLNTENAQKIADGIMKIIPCNINITDTAGEILASGDKSTLGTLHKGALTALKRKEA 60 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 I + ++GI LP+ I+GVI + G+ E + G++ A + +E Sbjct: 61 YVIYENTPTE----QRGICLPIIYNNSILGVIAIGGDVEEVMPIGQICLSIAVLTIENRL 116 Query: 121 LMHLLAQDSRLREELVMNL--IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 L + + ++ + + E+ A + A LGID+ PR ++ Sbjct: 117 LSDMSSIKESRLKDFLYEWISLSREQYDDAFYDQAAYLGIDMKIPRTAVVI--------- 167 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 ++ + + + + E V++ + + E + + Sbjct: 168 -TSSRIRYSIIETIKSHLAAGEYIVRQGMEEVLILFRSDKRLKSRLEKILD----ISKDL 222 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 + + T + + R Y ++ L LL+++ Sbjct: 223 ENCYIGESDIIASRTTNSV----------MQTFHIARALNIRRRILCYHEVSLECLLNNV 272 Query: 299 RGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 EL L LK D +G+L+ T+AA+ N L IHRNTL YRL +I Sbjct: 273 ---EVTRELEEILKLLKERDVDGVLKETIAAYVEDNDNYAQICDKLHIHRNTLNYRLAKI 329 Query: 359 SELTGLDLGNFDDRLLLYVAL 379 EL + D ++LY+A+ Sbjct: 330 EELLNRNPRRAKDLMMLYIAV 350 >UniRef50_Q5WK20 Carbohydrate diacid regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK20_BACSK Length = 363 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 102/382 (26%), Positives = 174/382 (45%), Gaps = 33/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L ++A +IV RTM I+ +N+N+M+A G +I SG+++R+ +H A+ VL G+ + I+ Sbjct: 1 MLTHELANEIVTRTMDIVPSNVNIMNAEGAVIASGEKKRLFNIHSIAVDVLRTGKSISIN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 V G + GINLP+R +G+ VGVIG+TG P + Y ELV M AE+++ Q+ L Sbjct: 61 PTVDCP-SGTKPGINLPIRFQGKSVGVIGITGNPVEVAPYAELVQMAAELLVNQAYLSEQ 119 Query: 125 LAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 L Q+ R+ +L+ L+ E EN A E Q G+D + + + L Sbjct: 120 LRQNERIAYQLLRALVVGEVENERAFMERLQATGLDS------LFLPLRAWALSKAHEQT 173 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 ++L + ER L + KR E + + Sbjct: 174 FPKELGHFFQYEERGELFFF-------------------ETRPEEKRFESFLQK----NN 210 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP--ESRCYFYQDLMLPVLLDSLRGD 301 + G G++A S A+ + + ++ +P E R ++++ ML L + Sbjct: 211 CLLIATSGPVAHSFGTVASSCNIARAALSLYEEDVPTTEKRLLYFEETMLEGLAFEWQQS 270 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L+ L + + L T+ +F HN + F+H NT+ +RLN+I L Sbjct: 271 GTIQPFLALLSPLLASNQSAELMETIKQYFIHNGDIKKIANHQFVHSNTVHHRLNKIKAL 330 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG + + L++A L + Sbjct: 331 TGKNPKVIRELTDLFIACLLYQ 352 >UniRef50_C1I4Y4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4Y4_9CLOT Length = 382 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 165/386 (42%), Gaps = 21/386 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 LD I+ R I ++N++ G II S +++R HE A + S R + I Sbjct: 1 MLDYNSCIKIINRLTPIFTKDVNIIGLDGIIIASSNKKRENTYHEAARISASSNRNIIIT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 G + G+N+P+ +++GV+G+TG E + YG L+ +M++ + + Sbjct: 61 TKNMHMYRGCKCGVNMPITYNNKVIGVVGITGTAEEVIPYGPLIKELVQMIINEIGVETP 120 Query: 125 LAQDSRLREELVMNLIQA--EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + +IQ +E+ + A+ L ID+ R + + ++ + + Sbjct: 121 QKAQKNNEKMYFKEIIQGIQKEDLESYKTRAKLLEIDMKVSRKMVVFKMCNN---YKNNY 177 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +++ L N + ++ + + +++ + D + + LI++MK Sbjct: 178 KKIEDLFNKYLSSLNVLVLNLNNEKIVLLFNNNI---------DIKSYINDLISKMKLSK 228 Query: 243 QLRFRVSLGNYFTGPGSIARSYRT--AKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + +G R+Y ++ +G + + L +L+ + Sbjct: 229 TNNYIFIIGKECKEILEYERAYYQIGLVESIEIGNSF---KKVIDVNEYSLKLLIKGISS 285 Query: 301 DWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 +++ + + N + +T+ +F ++++ T+K +++HRNT+ YRLN+ Sbjct: 286 EYRNRYIEDYYYEVFEGKNKASNEMLKTIKGYFINDMKIGETAKMMYVHRNTIMYRLNKF 345 Query: 359 SELTGLDLGNFDDRLLLYVALQLDEE 384 ++ G+D+ + +Y+A+ + EE Sbjct: 346 KKMYGIDITKPYECTKIYLAILIYEE 371 >UniRef50_A3DGK3 Transcriptional regulator, CdaR family n=5 Tax=Clostridium RepID=A3DGK3_CLOTH Length = 361 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 75/379 (19%), Positives = 159/379 (41%), Gaps = 28/379 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG-RVVDID 64 + K+ Q++V + +ID+ +MD G I+ D +++G+ ++ + V ID Sbjct: 1 MSVKIYQNLVNQIKDVIDSEFGIMDDTGLILACSDEKKVGQSSSLVSEIMRSKDQFVVID 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + ++ ++ + + + EN +K+ L+ + + Sbjct: 61 GQTFQK-----------VYIKNKLEFITFIDSDSENSQKFLALISINTINV-------KN 102 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + + + +I +T A+ L + N RVV +VE + + Sbjct: 103 YFDEKYDKISFIKGIIMDNILPGDITLRAKELHLQNNVNRVVFLVETEKAKDIYA----- 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ L + + V ++ ++V++K +D ++ K + +I + G + Sbjct: 158 -HEIIEGLFPVKNKDFVVVLDDEKVVLIKEL---KPDYDYKEINKISKVIIDTLSTEGMI 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + RV +G I RS++ A+ +++G E Y L + L+ L Sbjct: 214 KARVGIGTVVDNIKDIGRSFKEAQMALLIGGIFDSEKSIVDYNRLGIGRLIYQLPPTLCK 273 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L + T+ +F +N+ TS+ L++HRNTL YRL++I ++TGL Sbjct: 274 LFLKEVFKEGSFEALDSETMYTINKFFENNLNVSETSRQLYVHRNTLVYRLDKIQKITGL 333 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL FDD ++ VA+ + + Sbjct: 334 DLRLFDDAIIFKVAMLVKK 352 >UniRef50_B0N6A9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N6A9_9FIRM Length = 359 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 173/381 (45%), Gaps = 37/381 (9%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +++ ++A IV I D +IN +D +G I S D +RIG HE LL + + R++++ Sbjct: 14 MYINNQLATQIVETVKDICDHDINFIDCQGIIYASTDIKRIGSFHEAGLLAIKEKRIIEV 73 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + +G QG+NLP+ +I+ VIG++G+P+ ++KY L +++ + L Sbjct: 74 YDDTS--FNGSLQGVNLPVYYHDQIIAVIGISGKPDKVKKYAYLAQKITNLLIREKELNE 131 Query: 124 LLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + L+ +L+ ++ ++ + +DL + I+ + + S + Sbjct: 132 FNRSQAEKMHYLLQSLLDQENLDSQYFSDMLKYFQLDLKNNYRLLII-LAKRLVNEQSII 190 Query: 183 AELQQLQNALTTPE-RNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 EL L + + N +AI+ + ++K+ Sbjct: 191 QELHSLAIPVYHYQYPNRFLAIIDADYF----------------------NRCEYKLKKL 228 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 + +++G ++ SY +A + + + + + Y L L ++L S+ Sbjct: 229 AGNQVSIAVGKQIPLIK-LSESYHSALIAL----RNIQDHQYINYDVLTLEIILQSISIY 283 Query: 302 WQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + L + +A L D L +F ++ L T+ LFIH+NTL+Y+L+RI +L Sbjct: 284 DKKDYLNKTIAMLSLED-----LNLLHIYFEEDMSLLNTANRLFIHKNTLQYKLDRIHKL 338 Query: 362 TGLDLGNFDDRLLLYVALQLD 382 G + F D +LY+AL+L Sbjct: 339 CGYNPRKFRDANILYLALKLK 359 >UniRef50_C6PZL0 Transcriptional regulator, CdaR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZL0_9CLOT Length = 534 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 70/402 (17%), Positives = 161/402 (40%), Gaps = 37/402 (9%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 ++ + Q I+ +++ +I D + + ++ ++++ Sbjct: 148 DLVINNEDTQSIINALSDLLNEDILYYDTYFQ----------KAYYSCSMEMVTEEFRDF 197 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLT---GEPENLRKYGELVCMTAEMMLEQS 119 + H GIN E+ G I GE Y L ++L+ Sbjct: 198 NLSDILNKYHYYTIGIN------KEVYGYIIYLKHKGEDIEKDNYNALSHANTALILDVQ 251 Query: 120 RLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + + L + + + E V ++I + + A+ G DL++P V ++++D+ ++ Sbjct: 252 KKISSLQIEDKHKNEFVQDIIMNNIKFKEEVNKRAEIFGWDLSRPIRVMVIDIDNFKVEY 311 Query: 179 DS-------------AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 ++ + + + R+ + A S + + +L+P R+D+ Sbjct: 312 LKLESKNSNEELEFIREKIIKNITQIIKSYFRDAIYATFSDSLVFLLQPKDKDMKRFDS- 370 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 +K +++ +E + + +G++ I +SY A ++ +G+ F Sbjct: 371 QIKKSSDEIRNSTREKFEFTVTLGVGDFKDDIMEIHKSYEEALMSIKIGRVLYKNDAAIF 430 Query: 286 YQDLMLPVLLDSL-RGDWQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSK 342 Y +L + LL S+ + + ++ D N L +TL ++ + + Sbjct: 431 YGELGVFRLLYSVYENEEVMEFCKSSIGKIIDHDEKYNSELLKTLIIILENDWNLKSAAD 490 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 ++FIH NT++YR +IS L DL ++ RL L +AL++ + Sbjct: 491 SMFIHYNTMKYRYKKISMLLDEDLNQYEVRLKLSLALKIYQM 532 >UniRef50_A9KIU4 Transcriptional regulator, CdaR n=22 Tax=Clostridiales RepID=A9KIU4_CLOPH Length = 362 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 156/379 (41%), Gaps = 27/379 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++ Q+ + I +I VMD G+ + S + +E A+L Sbjct: 1 MISNQILQNTIEGLKAITRIDICVMDTEGKALAST--INNADEYENAVLA------FVDS 52 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A ++ L G + + E ++ VI + G+ +++ G++ + +L + Sbjct: 53 PADSQVLQGYQ---FFKVFDEHQLEYVILVKGDSDDVYMVGKIASFQIQNLLVAYK---- 105 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A++L I+ + RVV I+E + + Sbjct: 106 ---ERYDKDNFIKNLLLDNLLLVDIYNRAKKLHIETDVRRVVFIIETKNEKDT-----NA 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+ ++ +T ++ + A+ ++V + ED K + ++ + Sbjct: 158 LETVRGLFSTKTKDFITAVDEKNIILV----KEVKQNENYEDLTKTAKVILDMLNTEAMT 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + V+ G ++RSY+ AK + VGK Y +L + L+ L Sbjct: 214 KVHVAFGTIVNEIKDVSRSYKEAKMALDVGKIFYSGRNVVAYSNLGIGRLIYQLPMPLCK 273 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + D + T+ +F +++ TS+ L+IHRNTL YRL+++ + T L Sbjct: 274 MFIREIFEGKSPDDFDEETLTTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTNL 333 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL F+D + +AL + + Sbjct: 334 DLRVFEDAITFKIALMVVK 352 >UniRef50_B9MKN7 Transcriptional regulator, CdaR n=2 Tax=Clostridia RepID=B9MKN7_ANATD Length = 364 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 67/379 (17%), Positives = 148/379 (39%), Gaps = 26/379 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + K+ D++ + IID ++A GR+I S + ++ A+ ++ ++I Sbjct: 1 MMTQKVI-DVLEQAKDIIDDEFGYIEADGRVIYSSNPLSQNRINTVAIDMIKTDTDLEIF 59 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + G + V+ + + K + ML + Sbjct: 60 E-----------GRTYKVYRSQTDTYVLYINNTEPHAEKLLD--------MLNLVVMKAK 100 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A+ L I RVV + + + + D Sbjct: 101 EPASAYDKKLFIKNLLYDNILPGEIYTKARELHIATGATRVVFAIYIPNAKEIKDLN--- 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + ++ ++ + + + +V +K + ED K ++ + L Sbjct: 158 IGEILTSIFPKSTKDFIIQLDNNILVFIKEL---KPGSNDEDAYKVARIILDTLNSELLL 214 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + + +G+ ++ SY+ A+ + +G + Y L L L+ + Sbjct: 215 KAYIGIGSVVDDIKELSMSYKEAEAALKIGYIFEKDKYIVSYHKLGLGRLIYQMPTKLCE 274 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L +K D + L +T+ +F N+ T++ L+IHRNTL YRL++I + GL Sbjct: 275 MFLEEVFKDVKLSDFDPELIQTVEMFFECNLNVSETARQLYIHRNTLVYRLDKIERMIGL 334 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL F+D ++ +A+ +++ Sbjct: 335 DLRKFEDAIIFKMAMLVNQ 353 >UniRef50_C3WCK1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCK1_FUSMR Length = 361 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 87/387 (22%), Positives = 179/387 (46%), Gaps = 36/387 (9%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + ++AQ IV +IID ++N +D+ G II S D RIG H G V+ + ++ I Sbjct: 1 MEISKELAQSIVVEMKKIIDKDLNFIDSNGIIIASTDETRIGTYHAGGKQVILRKDIIKI 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G R+GINLPL GE++GVIG++GE + KYG+++ +E++++++ ++ Sbjct: 61 NRDE--EYIGSRKGINLPLNFNGELIGVIGISGETNEVEKYGQIIKRMSEILIKEAWILK 118 Query: 124 LLAQDSRLREELVMNLIQAE-------ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 ++S + L+ + L E ++ + +++ I +++S + Sbjct: 119 RNEEESEKERIFLETLLFQNSFLYNPIIFSETLEEIEKKKNGVIIVGKIIKIYDLESIKK 178 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 D ++++ N ++++ +++L D K E++I Sbjct: 179 IYDPIRIKVKKY----------NGYSMLNQNTIIIL-------------DFHKDREKIIE 215 Query: 237 RMKEYGQLRF-RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 + E+ + F +G G + SY+ + G + ++ FY DL L +++ Sbjct: 216 LLSEFNKKEFLSFGVGKIKEKIGELKDSYKEGVEALEWGIK--SKNEITFYDDLDLELII 273 Query: 296 DSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 ++ + + +L + + + ++N +K LFIH NTL+Y+L Sbjct: 274 KNITKNLAQIYKEKIFKKLTNKEIE-EYKIIFLLYEKYNGSLNKIAKELFIHVNTLQYKL 332 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLD 382 N++ E T L++ N++D L +A L Sbjct: 333 NKLYEKTDLNMRNYNDFTKLKIAFMLK 359 >UniRef50_C4ZEI3 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C4ZEI3_EUBR3 Length = 361 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 158/379 (41%), Gaps = 28/379 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++ Q+ + I T++ V+D G+I+ + A + + Sbjct: 1 MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPN--------AEAFIEPAQAFVAS 52 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A ++ ++G + + + ++ V+ G+ E++ G++ + +L + Sbjct: 53 PADSQVINGCQ---FFKVFDDHQLEYVLLAYGDSEDVYMIGKIASFQIQNLLVAYK---- 105 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A++L ID+ RVV IVE + + G E Sbjct: 106 ---ERFDKDNFIKNLLLDNLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDG-----NE 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+++++ ++ + A+ +VV +D RK E ++ + Sbjct: 158 LEKIRSLFGGKSKDFVTAVDEKNIIVV----KELAENETYDDLRKTAEVILNLFRSEADG 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 ++ G ++RSY+ A+ + VGK E Y L + L+ L Sbjct: 214 -VHIAYGTVINELKEVSRSYKEARMALDVGKIFFEERNIIAYSQLGIGRLIYQLPIPLCK 272 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + D + + T+ +F +++ TS+ L+IHRNTL YRL+++ + TGL Sbjct: 273 MFIKEIFDGKSPDDFDEEILSTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQKSTGL 332 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL F+D + +AL + + Sbjct: 333 DLRVFEDAITFKIALMVVK 351 >UniRef50_B8FWS7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FWS7_DESHD Length = 407 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 70/378 (18%), Positives = 149/378 (39%), Gaps = 10/378 (2%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 +++V + + + + R++ S E +G + + + Sbjct: 24 KELVDSAAHFVQREVVIANTSNRVLESTFSE---GFSQGEFFAVLPLQPPVPGRVQLQAG 80 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA--EMMLEQSRLMHLLAQDS 129 + + + L + + +G + + + +++ A +LE + LL Sbjct: 81 EKKAEALVVELSHDAKRLGFLFICDPGADEDNRLKVLIHQARNVFVLELQKKAELLENSR 140 Query: 130 RLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA--MAELQ 186 ++ + +L+ E+ + + G DL+ P VV E++ + + L Sbjct: 141 NYQDAFLFDLLYGNIEDNADIIARGKLWGWDLSLPHVVTAFELEDYESYSQDHYLVTTLH 200 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR- 245 + ++ ++ + E+V+ P R + Q++ + +E R Sbjct: 201 DIIQSVAQSLDKTVILMEKNEEVVLALPVEARKRRDFKAYLNMIINQVLAQAEERLAPRV 260 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 RV +G + P + RSY+ AK + + + ++++L + +L S Sbjct: 261 IRVGVGRRYEQPSELFRSYQEAKVAVKLSALLKDKGPIVYFRELGVERILYSHDKQELLE 320 Query: 306 ELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 LA L+ D L TL + ++ AT+ ALF+H N+L YRL RI E+ L Sbjct: 321 FYREILAELEAQDKQKNELIETLENYLVYHCDLKATADALFLHPNSLRYRLKRIEEILDL 380 Query: 365 DLGNFDDRLLLYVALQLD 382 DL +FD R+ L +A ++ Sbjct: 381 DLEDFDTRVSLVIAFKIK 398 >UniRef50_B7GMN9 DNA-binding transcriptional regulator (Contains C-terminal Fis domain) n=5 Tax=Bacillaceae RepID=B7GMN9_ANOFW Length = 410 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 84/407 (20%), Positives = 156/407 (38%), Gaps = 40/407 (9%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHE 49 + ++ R ++ I + DA R+I D R I L Sbjct: 12 ESLEEFADRVSELLQCPITIEDANHRLIAYSGHEHYTDPARTATIIHRRVPERVINSLWR 71 Query: 50 GAL--LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK--YG 105 + +L V + + G+ I + + E++G I E+ + + Sbjct: 72 EGVIPKLLQSEEPVRVTEISE---VGLGNRIAISIWKNKEVLGFIWAIEMNESWTEHQFD 128 Query: 106 ELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPR 164 L +L + +E L+ ++ + E +L + + Sbjct: 129 LLKQAAKAAKNLLLQLQIRKHKKEERIQEFFWKLLTGHFSSAHDIVEQCHQLNVHVYPFF 188 Query: 165 VVAIVEVDSG-QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD 223 V I + Q V+ + L + L P L I +V++ P+ N +G Sbjct: 189 SVGIFQFQQHIQTQVERQIDYLLKTTQQLAIP----LYTIDHQRLIVLVAPSSNVYGEAH 244 Query: 224 AEDHRKRVEQLITRMKEYGQLRFRVSL-GNYFTGPGSIARSYRTAKTTMVVGKQRMPE-S 281 E + +T+MKE ++ + GN + IA+SY+ A+T + + + + + Sbjct: 245 IE---RFFRSFMTQMKERFRIDITMGAFGNVYECYTKIAKSYKEAQTVLKMKRAFPHQLA 301 Query: 282 RCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPL 338 YQ L + D L + + L +LK D ++ L T+ + + Sbjct: 302 NIQSYQHLGMYQFFDLLFEQKRHGDFHNVALEKLKQYDAQHHTNLVETIETYLDCDSNVN 361 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 T+K L IH NTL YRL RISE+ +DL N +++ LY+ ++LD+ R Sbjct: 362 ETAKTLNIHPNTLAYRLKRISEIGNIDLSNMSEKVKLYIDMKLDKYR 408 >UniRef50_Q9KEU2 BH0757 protein n=1 Tax=Bacillus halodurans RepID=Q9KEU2_BACHD Length = 557 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 135/405 (33%), Gaps = 27/405 (6%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG---DRERIGE----LHEGALLVL 55 L K I+ + I++ + +++ R I+ + D++ E +HE Sbjct: 149 NMILSGKGFSQIIEKLAAILEAPVILLNERLDIMAATHKMDKDGFFEVYWFIHEI-NHAE 207 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTG---EPENLRKYGELVCMTA 112 + R P+ + G + + G + L Sbjct: 208 DTQTYQQCTLPQTNTTNPYRTFFLYPIHSANQQKGFLVVLGNLSPDAKGLQILALEQAAN 267 Query: 113 EMMLEQSRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEV 171 + E +++ + +L+ + L+++ + + +D + V + Sbjct: 268 VISFELMKMLAIEQHARQLKNDFFCELVESLITREEEILNRGKAYQLDKSLQYVCLASKF 327 Query: 172 DSG------------QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSF 219 D + + ++ +L N+ ++ + V+L + Sbjct: 328 DEMSSFQTEVQPLYMEKELRQQREQMFELLNSYLKKHFDHSILFTKGDLFVILIGFSY-Y 386 Query: 220 GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP 279 + + + + + F + NY IA +++ A + G + Sbjct: 387 NDAVEKTFIDAIRDIQQELNQMLDFSFSFGVSNYTERVTDIATAFQEAVDALRSGYRENK 446 Query: 280 ESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQP 337 + Y+ + L S+ L L L TL ++ H+ Q Sbjct: 447 KRFIKTYRIKEMTELFKSIPQQKLKEFYQSSLKDLAFPETKEKQDLLETLDSFLNHHCQI 506 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 T+K++FIHRNT+ YR+ + E+ G+DL + L L +AL + Sbjct: 507 SETAKSMFIHRNTVIYRIKKCEEILGIDLKGGHETLQLRMALFMK 551 >UniRef50_C9S1P6 Putative transcriptional regulator, PucR family n=2 Tax=Geobacillus RepID=C9S1P6_GEOSY Length = 739 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 82/403 (20%), Positives = 156/403 (38%), Gaps = 25/403 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIG----ELHEGALLVLS 56 + + + I + D + V D R I ER G +L + A V + Sbjct: 330 LMKETIRHEDFHGITKTVSHMFDKAVIVFDRFMRPIA---HERSGLSGQQLQQIAKQVFN 386 Query: 57 QG-RVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM 115 Q + + + P+ G+ VG + + P + + L A + Sbjct: 387 QVLGKSRMGGHIQLEGLSDLSIVVWPIHNGGDAVGYLAIETSPNEMDDFFLLGVELARNI 446 Query: 116 LEQSRLMHLL--AQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVD 172 + L +L++ + L+ AE E+ ++ ++A ++ + +A++ + Sbjct: 447 FSIQFMKQKLVFETKEQLKDSFLHKLLAAEIEDEESIIQYANVFQWNIFEEHRLAVLHLQ 506 Query: 173 ----SGQLGVDSAMAELQQLQNALT---TPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 +G + + AE L N L E ++L+ + +++ PA R E Sbjct: 507 MDESNGTVDLVKQNAEKTVLWNRLKVRIAAEDSSLLYGAVEDQYILIAPAARE--RKKPE 564 Query: 226 DHRKRVEQLITRMKEYGQLRFRV--SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 + Q I+R + +RV +G + G SYR A M V + P Sbjct: 565 KYWSEWHQRISRWINEEKTSYRVFLGIGGKASSIGDYYVSYRQAMQAMQVMIRNFPGKSV 624 Query: 284 YFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 F+ +L +L L+ + + + L L N +T+ + N T Sbjct: 625 AFFDELGAYTVLHHLKELEAAKLFVDKYLGPLLRHSVGRNADWLQTVRVFLDCNGHLTET 684 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 ++ L+IHR+TL+YRL +I E+ G L + R L +AL+L + Sbjct: 685 AERLYIHRSTLQYRLEKIEEMLGFSLQGAEQRFNLMMALKLYD 727 >UniRef50_Q03T99 Transcriptional regulator, CdaR family n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03T99_LACBA Length = 346 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 101/380 (26%), Positives = 170/380 (44%), Gaps = 43/380 (11%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD K+AQDIV + M I N+N+MD +G II SGD +R+ LH GA+ ++Q + + Sbjct: 1 MKLDPKLAQDIVNKMMTQIPYNVNMMDDQGYIIASGDPQRLNTLHVGAVAAINQQTTLPM 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D+ H + G+N+P+ +I+GVIG+TG+PE + L+ + E++L+Q++ Sbjct: 61 HDSYGDH---GQPGVNMPIVFNDQIIGVIGITGDPEKVTPLASLLRVATELLLDQNQHNL 117 Query: 124 LLAQDSRLREELVMNL---IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 Q + + Q + L AQ+LGID+ +PR ++ + Sbjct: 118 QEKQYETTLNRFLYHWSQVTQQIDTNTNLLLEAQQLGIDILKPRAAIVLPKQTLP----- 172 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 + + + + T ++VL + R+ T + Sbjct: 173 -----------IGLLDATDFQFDLDTTTLIVLTALPATIARF-------------TTYCQ 208 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 GQ R + L + ++ S R A+ T+ + + ++ Q + LLD G Sbjct: 209 TGQHRLGIGLFD-----RNVGNSVRQARQTLRISQIFQRPDFIHYSQIAFIQALLD---G 260 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 +L + +L + N L +TL + R N L T+ AL IHRNTL YRL+R+ + Sbjct: 261 HLHVTDLQQRFQKLASTANGRELIKTLGMFVRLNTNVLQTAAALHIHRNTLSYRLDRLQQ 320 Query: 361 LTGLDLGNFDDRLLLYVALQ 380 + LD D LYV Sbjct: 321 IFQLDPHQTLDLFTLYVGYL 340 >UniRef50_C5RKH8 Transcriptional regulator, CdaR n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKH8_CLOCL Length = 544 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 153/406 (37%), Gaps = 29/406 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIG----ELHEGALLVLS 56 + L+ + IV +II+ I + I + + + L Sbjct: 141 LMDLMLNGANIEKIVDVLAQIIEKPILISLE----IPKSEISNFHFIEKKFEDTLLKSAR 196 Query: 57 QGRVVDIDDAVARHLHGVRQGI--------NLPLRLEGEIVG--VIGLTGEPENLRKYGE 106 I D + I + + G I P + + Sbjct: 197 TYNSTHITDNSNTLFQKSAEFIDDAYVNKYVKAIVINNISYGHLFIWSFESPLDSLDFSI 256 Query: 107 LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRV 165 + + + E + + +L ++ ++ + NL+ + T E +D + + Sbjct: 257 INNILVPIQNELVKKVSVLEIENSHKKNFLDNLLSKDLKTREKALEITNEFHLDRDNSFI 316 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERN----NLVAIVSLTEMVVLKPALNSFGR 221 + ++ Q + + +L + R LVA + +L + + Sbjct: 317 AFSITLEKNQSLYSTKKQLIPKLFYYVENLIRKKGIIGLVANDCQSVYFILSFNQSEDIK 376 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 ED K +E T ++ + L +++ +G + G ++ SY AK ++ +G + +S Sbjct: 377 NQIEDFCKSLEN--TLIENFQTLDYKIGVGRCYEGLENVRCSYEEAKNSIGIGNRLNKKS 434 Query: 282 RCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPL 338 FY L + LL + + + +L D + L +TL +F+ N Sbjct: 435 MI-FYDKLGVYTLLCHDGLNNELELFYNNTIKKLVDHDKKKSTELVKTLEVYFQCNGNLN 493 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 +K LF H NT+ YR+NRI+E+TG+D+ N ++RL L +AL++ Sbjct: 494 KIAKVLFTHYNTILYRINRINEITGMDIKNEENRLNLEIALRIMHM 539 >UniRef50_C0DA86 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA86_9CLOT Length = 352 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 148/383 (38%), Gaps = 35/383 (9%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 +L AQ+IV M I+ ++V D G II S +G+ A + Q + Sbjct: 1 MSVYLSVAQAQNIVFELMEIVPKGVSVADENGCIIASSSAAFLGKSSRLAKECIEQAGQL 60 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 H PL VG I +TG+PE +++ + E ++ Q Sbjct: 61 ----QSYNERHYEGNTTATPLFFRDICVGAIIMTGDPERIKRLTSIAKAVGESVICQPYF 116 Query: 122 MHLLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + + E + + EE T RLGID+ QP +++ G+ + Sbjct: 117 NNPDQTSYVMYFEYLTEWLNNTEEYTLPFIRRGVRLGIDVTQPYYTVVLD------GIWN 170 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 ++ + ++ L+ P + +VL E ++V L +K Sbjct: 171 PVSAQKAVERILSGPN----YYLCHNNSCLVLI-----LQEGTDESVLRQVAALFHDIK- 220 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 +++G+ T + RS+ A+ + GK+ P+ Y Y+D L ++ Sbjct: 221 -------IAVGSVETS---LNRSFVVAQNALFAGKRLHPQKNIYDYRDYEFAYALSKIQD 270 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + L + L +TL + + + LFIHRNTL+YRL++I E Sbjct: 271 LKVKKGVLE----LFEQPQHADLLQTLEMYIQESGNSAEVIHKLFIHRNTLKYRLDKIQE 326 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 LTG + +F D LYV L Sbjct: 327 LTGKNPRSFQDLFYLYVLYVLYR 349 >UniRef50_C4GCS6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCS6_9FIRM Length = 381 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 94/390 (24%), Positives = 161/390 (41%), Gaps = 21/390 (5%) Query: 2 AGWHLDTKMAQDIVARTMRII-DTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + + +AQD V T ++ IN+MD +G II S + RIG H+GA + GR Sbjct: 4 ITMSVFSDLAQDFVEATSSLVRGRTINLMDTKGMIIASTEHGRIGNFHQGAKEAIETGRP 63 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 V I A G ++G N+P+ G+++GV+G+ G+ E ++ L+ + +Q Sbjct: 64 VRIAKADLPKYKGAKEGYNMPIFQNGQVIGVVGVYGQEEEVQDVANLLRVYVTQSFKQQV 123 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ-RLGIDLNQPRVVAIVEVDSGQLGVD 179 + + LR +L+ + ++ E L L P V +++ G+ Sbjct: 124 IARRQVMEGELRSQLLDLYLLGNPDSQENIEQLSDVLSCHLCFPVTVIVLKTT-APSGIS 182 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 L+Q RN++ ++++ S ED + Sbjct: 183 GIYDILRQYFGNDEVFSRNDIYGA-KDNIFILIRSFTGSKRPDHFEDIAANL-------- 233 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV---GKQRMPESRCYFYQDLMLPVLLD 296 G+ R+ + + G I Y+ AK + + G R+ E+R L L LL Sbjct: 234 CRGKKELRMVISDSCANAGEIVEGYKEAKALLSLSGDGIDRLSEARAK--SKLYLGKLL- 290 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 G +L R L + L +F + ++AL IHRNTL YRLN Sbjct: 291 QHGGSHYIQQLNRTLRNEVSAQQEQTLLENAKTYFLMDGSVSQAAQALQIHRNTLLYRLN 350 Query: 357 RISELTGL-DLGNFDDRLLLY--VALQLDE 383 R+ E+ GL D+ F+ L + +A + +E Sbjct: 351 RLYEILGLNDVAPFERELFIRMLIAFRAEE 380 >UniRef50_C0ZE84 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE84_BREBN Length = 732 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 77/396 (19%), Positives = 143/396 (36%), Gaps = 28/396 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMD--------ARGRIIGSGDRERIGELHEGAL 52 + L K A+ IV ++ I D + + S D L Sbjct: 352 IKQLSLQNKGAETIVKTLSKMTGHPIYFADWLEQKMYPEKSLLFFSWDE----------L 401 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINL-PLRLEGEIVGVIGLTGEPENLRKYGELVCMT 111 L R + + G Q L PL +G + L + L + Sbjct: 402 YTLLNKRRQPVSVNLFSPASGDDQRFCLYPLINGSIFLGCLMLPVDERGLSDLTRMTIEQ 461 Query: 112 --AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV 169 A ++L+ + + + + +L LI ++ N L + A +G+ V Sbjct: 462 GSAVLILDLVKKQSISSVLYKRAHDLFQELIVSKGN--ELFDRAHSMGLQPQATYYVIYA 519 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 + + A + +L + + V L + + G D +D R+ Sbjct: 520 HLTQCH-DLALLEANIHRLITRFKWAFNKTQMFVYGFHNHVTLL--IRTLGSRDGKDIRE 576 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 R++Q + + + +G+ +G I++SY AK + R S Y+DL Sbjct: 577 RLQQAYDEWELGKEASLSIGVGSMASGIEQISKSYEEAKKAALYLTNR-SRSGVVHYKDL 635 Query: 290 MLPVLLDSLRGDWQANELARPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 + L+ + + A L + + +T+ + + + P T+K L IH Sbjct: 636 GINRLMLNQSQADIDAFIHDVFAPLWQDPEKYEEWEQTIITYMKCSQSPQLTAKELHIHV 695 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 NTL RL ++ EL +DL + +D L L +A L +E Sbjct: 696 NTLYQRLRKVEELLHIDLRDPEDLLKLQLACHLRQE 731 >UniRef50_B5I5X6 Sugar diacid regulator n=2 Tax=Streptomyces RepID=B5I5X6_9ACTO Length = 421 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 15/350 (4%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L +AQ+I + T +I N+ + DA G +IGSGD R+G HE ++ V+ + Sbjct: 1 MLSPSLAQEIASDTTAVIGFNVLITDAGGLVIGSGDSSRVGSFHEASVEVVRTQEPATHN 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + A+ L GVR G+ LPL G+ VG +G+TG P +R++G LV E++L +S ++ Sbjct: 61 ASQAQQLRGVRPGVTLPLVANGKAVGTVGITGTPAQVRRFGLLVKRQTEILLRESVMLRS 120 Query: 125 LAQDSRLREELVMNLIQAEENTPA---LTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 R E+L+ ++ + L A LG DL RV +EV + G Sbjct: 121 RLLAERAAEKLLSDVASYDPQVVEGDFLLFRAAELGFDLRLRRVAVAIEVRVPEAGARRQ 180 Query: 182 ---MAELQQLQNALTTPERN------NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 ++ +++ L R +++A + + VL+ + Sbjct: 181 GAPTRDMALVRSELLRTVREVFADPQDIIASTAPGWIGVLRRLPDRRPVT---SLLDDCR 237 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 + + L R +G + SY+ A + +G + +S + DL + Sbjct: 238 RTTDVIAAQDGLVARAGIGEPAASVSGLHDSYQDACDALRLGARVASDSPVHLITDLRVH 297 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 L ++ + + R A L+ + +LR T+ AW + S+ Sbjct: 298 QALTTVSQPARNRLIERTTASLRGQPDWPVLRDTITAWCESGFNLVRASE 347 >UniRef50_D2M035 Transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M035_BACS4 Length = 560 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 136/399 (34%), Gaps = 23/399 (5%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 + I+ I+ I +++ R I+ + + + DID+ Sbjct: 147 ISGGGFSKIIESLTNILRVPIILLNYRLDIMANSHELNKDTFFDIYWHIHETVHQEDIDE 206 Query: 66 AVARHLHGVRQGI-----NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQ 118 L P+ + G I L G P L A ++ E Sbjct: 207 YKVIELPKSNMNTYEKLSIYPIHSTNQQKGYIILFGSPLTNDYSSTLALEQAANVISYEF 266 Query: 119 SRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSG--- 174 ++ L R++ E +L++ +N + + V ++D Sbjct: 267 MKIHALEQHSRRIKNEFFTDLVEGTMKNEDEIFNRGSEYDLKKELHYVCITSKIDDASDF 326 Query: 175 ---------QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 ++S ++ +L ++L + + + + ++ L + +F + Sbjct: 327 YVDAHPLQSDKEINSKRDQIYELLSSLLASQFETSI-VFNKGDLFTLLIGMENFHETAEK 385 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 + + + + E + NY +I+ S++ A + G + + Sbjct: 386 NLLDTIHVIQMDIYETQHTALSFGVSNYTDNIKNISTSFQEAVDALRSGYRESKKRFIKT 445 Query: 286 YQDLMLPVLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKA 343 Y+ L L ++ L L L TL+ + +N Q T+K+ Sbjct: 446 YRVKELAELFRAIPTQKLEEFYKSSLKDLAFPPEREKEDLMNTLSIYLNNNCQIAETAKS 505 Query: 344 LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +F+HRNT+ YR+ + ++ G+D D+ L L +A + Sbjct: 506 MFVHRNTVIYRIKKCEKILGIDFKGEDETLRLRIAFFVR 544 >UniRef50_B8HX31 Transcriptional regulator, CdaR n=2 Tax=Bacteria RepID=B8HX31_CYAP4 Length = 436 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 83/404 (20%), Positives = 160/404 (39%), Gaps = 51/404 (12%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 K+A+ +V + R++ T + V D G II S + +G V SQ ++ Sbjct: 34 QKVARQVVEQLTRLLQTGVIVTDQAGWIIASYEPAWLG---LSLQRVRSQFHPLNA---- 86 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 +PLR GE G I + + L+ +++L+Q+ ++ Sbjct: 87 -----------AIPLRW-GEDQGTIRIAASTQTEPLNLRLIQRLVDLILQQTTVLTSGTS 134 Query: 128 DSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIV----------EVDSGQL 176 L+ + + +L++ + Q G+DL +PR V ++ E D + Sbjct: 135 QHELKHKFIHDLLRGRPLNRLDILRDGQIFGMDLTRPRAVVLIDAANYILATPEFDLERP 194 Query: 177 GVDSAMAELQQLQNALTTPE--RNNLVAIVSLTEMVVLKPALN----------------S 218 + + + ++ + + A + E+ VLK + + Sbjct: 195 THQIWWRAQRVISSVVSFFHLPNDTICAYIGDGEIAVLKASRTQDLAAWASGQDQASLLN 254 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 + ++ L++R++ Q + +G Y +A SY+ A+ + +GK Sbjct: 255 SSWANLSALKRAGNALLSRLRSDTQAAITIGIGRYHPQLEGLAHSYQDARAALSLGKHFH 314 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPL 338 +++ + L + + + + L+ L D L TL +F N P Sbjct: 315 GQNQVHCLDSLGIAAFIGLADEATKIDLARHLLSPL---DQETELLETLNVFFDQNCCPS 371 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 T++ L IHRNTL YRL +++ LTGLD FD + + +AL L Sbjct: 372 TTAQQLSIHRNTLSYRLEKVTLLTGLDPRRFDQAMQIRLALLLR 415 >UniRef50_O32138 Purine catabolism regulatory protein n=3 Tax=Bacillus RepID=PUCR_BACSU Length = 531 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 65/392 (16%), Positives = 135/392 (34%), Gaps = 18/392 (4%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELH-EGALLVLSQGRVV 61 + K Q ++ + I+ + ++D +++ + + + +G L +S Sbjct: 144 NHIMSGKGLQSLLKKVSDILQLPVLLLDQHAKMLSASHQISVETEKLKGTLNTVSGPFFT 203 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQS 119 + + V LP+ + G + + + K L A ++ E Sbjct: 204 CFSTISDQKTYSV-----LPIYNHEKNCGYLLIPDMVQAGDKGLILTIEQAANVISFELL 258 Query: 120 RLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + L R R E N I+ + + A+ + +Q + ++D + Sbjct: 259 KENALKQFSRRARNEFFNNFIERTFSSDDEIKNRAKEFKLRWDQKYMCIAGKLDRNDESI 318 Query: 179 DSAMAELQQ------LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 +L L+ L+ + ++L A +S+ A +E Sbjct: 319 SFTENQLASDSVFEFLEGELSAFPFPP-HFFMKGNVGIILIEATDSWSEMHA-SVISFLE 376 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 Q T++ + + N + ++ A + G + Y +P Sbjct: 377 QFQTQVSAQFKRTVSFGISNICQKLIDVPDAFTEASDALQSGHLSRSTAFIQVYHAKDVP 436 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGL-LRRTLAAWFRHNVQPLATSKALFIHRNTL 351 LL L + L L L TL+ + + Q T+K L++HRNT+ Sbjct: 437 ELLRLLPVEDLKKFYNSTLQSLAEKQQEDQSLLHTLSVYLETHCQISETAKRLYVHRNTV 496 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YRL + EL G L + + + L +AL++ Sbjct: 497 IYRLEKCEELLGKSLKDPETTMRLRLALRMQR 528 >UniRef50_C4Z3X9 Carbohydrate diacid regulator n=18 Tax=Bacteria RepID=C4Z3X9_EUBE2 Length = 363 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 72/379 (18%), Positives = 147/379 (38%), Gaps = 27/379 (7%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + ++ Q V I ++ ++DA + + L+ Sbjct: 1 MISNRILQTTVDGLKAISRVDLCIVDADKNVAAKT--------FDNVSECLADAISFIDS 52 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 A ++ ++G + + EG + +I G +++ G+L + +L + Sbjct: 53 PAESQAVNGFQ---FFKVEDEGNLEYIIMARGTSDDVYMVGKLAAFQIQNLLVAYK---- 105 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + ++ + NL+ + A++L I+ + RVV I+E + Sbjct: 106 ---ERFDKDNFIKNLLLDNLLRVDMYTRAEKLHIETDVKRVVYIIETKHEKDTS-----A 157 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 L+ ++ R+ + A+ + ++V G ++ K + +I + Sbjct: 158 LETVRTLFANKTRDFITAVDEKSIILV----KEVKGNESYDELDKTADVIIDMLNTEAMS 213 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 V+ G ++RSY+ AK + VGK Y L + L+ L Sbjct: 214 AAHVAYGTIVNDIREVSRSYKEAKMALDVGKIFYSNKNVVAYNRLGIGRLIYQLPIPLCQ 273 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 + D + T+ +F +++ TS+ L+IHRNTL YRL++I ++TGL Sbjct: 274 MFIKEIFEGKAPDDFDDETLSTINKFFENSLNVSETSRQLYIHRNTLVYRLDKIQKITGL 333 Query: 365 DLGNFDDRLLLYVALQLDE 383 DL FDD + +AL + + Sbjct: 334 DLRVFDDAITFKIALMVVK 352 >UniRef50_A1SC72 Transcriptional regulator, CdaR family n=3 Tax=Nocardioides sp. JS614 RepID=A1SC72_NOCSJ Length = 563 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 24/372 (6%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 I + + V D G + R + Q + + G Sbjct: 201 IAQALHELTGFPVAVEDRFGNLRAWAGPHRPEPYPKDPQARREQMLRRALREGQPVREGG 260 Query: 74 VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCM--TAEMMLEQSRLMHLLAQDSRL 131 I P +++GV+ L + + ++ + +E +RL L+ + RL Sbjct: 261 RLVAIANP---AADVLGVLALIDPAQRAGEQEQIAIEHGATVLAMELARLRSLIETELRL 317 Query: 132 REELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNA 191 R +LV L+ E + AL E AQ LG DL +P V ++E + + +++ Sbjct: 318 RRDLVDELLSGTEESSAL-ERAQALGHDLEKPHRVVMIEGNGRVHDSGAFFLAVRRAARQ 376 Query: 192 LTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLG 251 + L+ + +V+ +A+ ++ L+ +KE G R R+ +G Sbjct: 377 M---HAGTLLVARGESVVVL----------SEADLDWEKFRTLV--IKELGGGRCRIGVG 421 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARP- 310 +Y GPG +SYR A+ + + E + Y DL + +L + R Sbjct: 422 DYCQGPGGFPQSYREAQLALRMQGVAKAEDQATVYADLGVYRILAEVENPAAVERFVRLW 481 Query: 311 LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 L+ L D L TL+ + + AT+ L +HR+TL+YRL RI E++G DL + Sbjct: 482 LSPLLDYDARKGSDLVHTLSRYLECGGKYDATAIELSVHRSTLKYRLQRIREISGHDLSD 541 Query: 369 FDDRLLLYVALQ 380 D L +A + Sbjct: 542 PDTAFNLQLATR 553 >UniRef50_Q3DF78 Putative uncharacterized protein n=10 Tax=Firmicutes RepID=Q3DF78_STRAG Length = 364 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 24/378 (6%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L ++AQ IV + +IN ++ +G I S + +R+GE HE L V G+++++ Sbjct: 1 MKLRKQLAQQIVTSIKDVCQQDINFINTKGIIFASTNPKRVGEFHEIGLKVAQTGQMIEV 60 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 D + G + GIN+P E++ IG++G P + KY L ++L++ L + Sbjct: 61 TDQES--YFGTQAGINIPFYYNCELLATIGISGNPNQVGKYALLAQKMTRLILKEHELDY 118 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L ++ +L++ E + + + E++S + + + Sbjct: 119 LDFGRKNEASIVLHHLVEGRELDYYYLNQFLNQYHLSEKTDYRLLTFEINSQKQKLLLSQ 178 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 +E+ L N + ++L + ++++ + Sbjct: 179 SEM-SLLNFFDKLDTAIYTFNYPNQYWLLLS----------DQMFDYYYPNILSKFECEK 227 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 L ++V +G + + RSY T+ + K + + DL L +LL S+ + Sbjct: 228 GL-YKVGIGQK-SSLSLLKRSYETSILAL---KALKGQQKVNLVDDLDLELLLTSIDSNI 282 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + L + L L D L ++F+HN+ S+ LFIH+NT++YRLN+I E T Sbjct: 283 KQYVLNKALVNLSENDK-----ILLNSYFKHNLSLKECSQELFIHKNTVQYRLNKIYEST 337 Query: 363 GLDLGNFDDRLLLYVALQ 380 L+ NF D LLY+AL+ Sbjct: 338 QLNPRNFKDATLLYLALK 355 >UniRef50_B6FPT8 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FPT8_9CLOT Length = 377 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 147/379 (38%), Gaps = 31/379 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINV--MDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 L ++ + I+ + +V M+ + I + +RI G L +G+ Sbjct: 17 LLSNQILHKPINDIHEIMGVDCSVWSMEGKCLAIAGMNEDRI---KAGVDKFLKEGKDEQ 73 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 + + A L +R + V V+ L E + G L + ++ + Sbjct: 74 VCEDEAFFL----------IRDNYDAVYVLALHEVVEQVAIIGRLCISQFQNLIHAYK-- 121 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + + NL+ + A++LGI++ + RVV ++E + + Sbjct: 122 -----ERLDKNHFFQNLLLDNLLLVDIFNQAKKLGIEVERRRVVFLIEPKNETDNI---- 172 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + + L + V V ++++K + G + + ++ + Sbjct: 173 --VLETMKGLYATGSKDFVTSVDEGHIILIKALETTEGYKELNMI---AKSIVDTLTMEA 227 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDW 302 + RV+ G +++SY+ A + VG+ + Y +L + L+ L Sbjct: 228 MVNMRVAYGTIVNQLRDVSKSYKEAGMALDVGRIFYEQKNVLAYNELGIGRLIHQLPVSL 287 Query: 303 QANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L + T+ +F++N+ T++ L++HRNTL YRL +I +LT Sbjct: 288 CDMFLQEVFDGKAVDQFDEETLSTVNQFFQNNLNISETARQLYVHRNTLVYRLEKIQKLT 347 Query: 363 GLDLGNFDDRLLLYVALQL 381 GLD+ FDD L +A+ + Sbjct: 348 GLDVRVFDDALTFKIAMMV 366 >UniRef50_A8VSV2 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSV2_9BACI Length = 532 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 144/385 (37%), Gaps = 20/385 (5%) Query: 15 VARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGV 74 + + ++D ++I G +LH L Q R + V Sbjct: 139 IDALQTATGQPVTLLDETFKVI-KGPESDAPDLHGTWAQHLIQSRSRWLQRYYFHPESFV 197 Query: 75 RQGI-------NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM-LEQSRLMHLLA 126 R+ P+ ++ E+ G + + Y +L A ++ L + Sbjct: 198 REAAGQTIPLSCFPVYVQEEVKGFVI--TPLTHTPWYRQLFDYYALLLSLVMQEERKMEE 255 Query: 127 QDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + + + +L+ ++ AL + A+ G L P +A++ + + Sbjct: 256 VNGTFKHHFLHDLLYNNFKHEQALRDQARTWGWQLEGPHHLAVIRIQANPEHEQHLPTGW 315 Query: 186 QQ-----LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI-TRMK 239 + L + + ++ +++ + G + + + L+ K Sbjct: 316 HRETGEALIRRIRQDLKEAIIEWFQGDIILIQEAICAKDGNVRRDRIKTYLHDLLVEAAK 375 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + QL +G + P ++ +SY+ A + +G + E+ Y +DL + LL L Sbjct: 376 KDEQLLAEAGIGKCYPSPTALNKSYQEALMALKLGHEWSKENVVYHIEDLGVLRLLFYLN 435 Query: 300 GDWQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 D LA L D+ G TL W H++ T+ AL +H NTL R+ + Sbjct: 436 QDHLTEFSESYLAPLIQADSQGQTAYIHTLKMWIIHDMNVQETAAALHVHPNTLRNRMQK 495 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 IS L +DL N +D + + +A+++ Sbjct: 496 ISSLLHVDLYNHEDFVNISIAVKIH 520 >UniRef50_UPI0001C423A1 putative transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C423A1 Length = 618 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 64/396 (16%), Positives = 138/396 (34%), Gaps = 15/396 (3%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG-----DRERIGELHEGALLVL 55 + L + I+ + I + ++ G ++ S L Sbjct: 213 LTDLVLHGEGLSSIMHYIYQNIGYHAILISELGHVMASTIDSPFTPAETQTLLNSLEEAA 272 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKY-GELVCMTAEM 114 ++ + + L G + LP+ +GV+ L + E L A + Sbjct: 273 NETNPISPIKLTCKQL-GDVSVVLLPIGSAEGNLGVLALLADGEISEMILAALGHACAVI 331 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG 174 LE + + L+ E + L+ + A E A+ L + ++ Sbjct: 332 SLEILKNQAAFDTEQTLKGEFIEELLSGNVD-RAFFERAKHLNLSEKGHFTSFMLRFREF 390 Query: 175 QLGVDSAMAELQQLQNALTTPERNNL---VAIVSLTEMVVLKPALNSFGRWDAE-DHRKR 230 + +Q+ + +L VA+ +++V + R E + Sbjct: 391 DVTNQYDNHLQRQMVVLIQKYIDEHLHSGVAVAKNEQIIVAISFEHPSARETREYQLNEL 450 Query: 231 VEQLITRMK-EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 + + +++ + + + +G +T + +S+ A + + + Y DL Sbjct: 451 LSYIKQQIQLKEWKTDIQCGIGRSYTHLTQLKKSFHEASKCIQFLRSYDLQIDELRYHDL 510 Query: 290 MLPVLLDSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIH 347 + LL + + + L L + + L TL + HN T++A+ IH Sbjct: 511 GVQRLLLQNTKEELTDFVEETLGPLLQYERSKKTELLETLILYLDHNQNVKKTAEAMHIH 570 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 NTL YRL R+ + +D + L +++AL L + Sbjct: 571 LNTLAYRLKRVETILEVDFQDSRQFLDVHMALNLYQ 606 >UniRef50_C1B522 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B522_RHOOB Length = 380 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 96/376 (25%), Positives = 154/376 (40%), Gaps = 25/376 (6%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + ++AQ +V +D NIN+MD GRIIGS DR RIG +H GAL + GR V Sbjct: 13 FAYVFTGELAQRVVDEVSPRLDYNINLMDRNGRIIGSVDRTRIGTVHAGALHAIRDGRRV 72 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121 +D VR GIN+PL L+G IVG +G+TG+P + ++ +T E++L + Sbjct: 73 LVDADEQSA--DVRAGINIPLTLDGRIVGAVGITGDPAEVESVCSVLALTVELLLRNEQH 130 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 EL++ L+ L E + +G + P + SG Sbjct: 131 RDSSRWREAAVRELLLGLVNGTVGENGLLEALRHIGSPMTPPWNITAAVPASGSGSWSLP 190 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + L + V L V + + + L + Sbjct: 191 SSTSVALLRRIQGEPG---VVAAELQGAVWVLSSSVTD------------RTLAATWRRL 235 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ-RMPESRCYFYQDLMLPVLLDSLRG 300 R+ G + + S A+ M++ + +P L+ + + Sbjct: 236 RTGDVRLVTGRHAASSREL--SVDAARLGMLLTRAALLPTGEVTELSALVPEIAVAQQSR 293 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 D + + R L L + LR T A+ HN+ +T+ AL +HRNTL RL+RI Sbjct: 294 DISHDTVERVLTPL-----STTLRETARAFLEHNLSIASTATALQVHRNTLVQRLDRIEH 348 Query: 361 LTGLDLGNFDDRLLLY 376 +TGL+L FD + + Sbjct: 349 VTGLNLRTFDHAVAMR 364 >UniRef50_D1Y2S3 Putative transcriptional regulator, CdaR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2S3_9BACT Length = 536 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 71/409 (17%), Positives = 149/409 (36%), Gaps = 44/409 (10%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHE---GALLVLSQG 58 G + ++I+ ++ MD DR+ I AL L Sbjct: 144 FGLSVRAAEIEEIMQVLCEFTHVDLAFMDLA------TDRKYIFSDSPQLPAALDTLPLK 197 Query: 59 RVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELV---CMTAEMM 115 V+++ + L G ++G + + E L+ + ++ Sbjct: 198 DVLNLYPHED-------------VMLNGRLLGHLIFDADAEKLKDRWSEIPINQAKGALL 244 Query: 116 LEQSRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSG 174 L R +SR R E V +LI A+ +L P+ V IV++D+ Sbjct: 245 LYFQRREVRHQVESRYRNEFVQDLITRNIRMEQEAWNRAKSFNWNLEGPQRVVIVDIDNY 304 Query: 175 QLGVDSAMA------ELQQLQNALTTPERNNL---------VAIVSLTEMVVLKPALNSF 219 + + A++ ++ ++ + R+ L A +S + + + + Sbjct: 305 KSCLTRAISGGQGVNAIENSKSRIYAIARSFLARLNGGKYPYAEMSDSIVFIFPSGDENG 364 Query: 220 GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP 279 G + + R+ + ++ ++ V +G+ SYR A+ + + ++ Sbjct: 365 GGFFNDLLRRTLADMMKVIQTETGFTVTVGVGDPCNNVFDCPESYRQAQQGLELLRRSTG 424 Query: 280 ESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMDN--NGLLRRTLAAWFRHNVQ 336 + + ++ + LL + G + + + R L L + L TL N Sbjct: 425 GNVIASWSEMGVYKLLYGVVGTPEGSGFMERYLGPLLNDERPAGATLLNTLQTTVSCNWN 484 Query: 337 PLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 + A+ +H NTL+YR +I ++ G+D DRL + +AL+L Sbjct: 485 LKDAATAMNVHYNTLKYRWRKICDILGIDPSKSGDRLNVMIALKLYRMH 533 >UniRef50_C0GEC1 Transcriptional regulator, CdaR n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEC1_9FIRM Length = 550 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 76/404 (18%), Positives = 160/404 (39%), Gaps = 26/404 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGELHEGALLV 54 + L K +I++ ++D + ++D R++ G + + + E + Sbjct: 144 LTQLVLKNKGLSEILSVLAELLDRKVRLVDNSYRLLAGGVLSDGGEADTSEAIEEEFQWL 203 Query: 55 LSQGRVVDIDDA----VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCM 110 G + ++ V I P+ + + G+ + + Sbjct: 204 RKYGILDSLEKDKKAAEVAESKHVSAQIIAPVMSGDTVTAYLSAVGDSQTFSELDLAALY 263 Query: 111 TAEMM--LEQSRLMHLLAQDSRLREELVMNLIQAEENTPAL-TEWAQRLGIDLNQPRVVA 167 A + L + + + RL+ + + +L+ + + A+ LG + V Sbjct: 264 QAATLCSLVLLKEAAVRDTEDRLKGDFLDDLLSGNYPSEEIVLRRARFLGYESIHRGVFM 323 Query: 168 IVEVDSGQLGVDSAMAELQQL--------QNALTTPERNNLVAIVSLTEMVVLKPALNSF 219 + + + + + + E+ Q+ Q AL +++ + S T +V++ F Sbjct: 324 LFKANEFETLEELSEPEIIQIKTDLISLIQEALQQKNIHSICRLQSATVIVLILEEGFLF 383 Query: 220 GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMP 279 G D E + E++ +MK + LG + G +A+S+ + + + ++ Sbjct: 384 GDADVELATELKEEIEQKMKR---VTVSAGLGRPYRELGKLAKSFAEGEKALRIAQKIGD 440 Query: 280 ESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQP 337 + + + DL LL S + R+ D NNG L ++L + N Sbjct: 441 DRGIFRFSDLGAFRLLLSENEAELNAFYRDTVERIVEDDRKNNGELLKSLKVYLDENRNI 500 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + LFIHR+TL+YRLN+I+ LTG DL N +D L L++ + + Sbjct: 501 KEAASKLFIHRHTLKYRLNKIAGLTGRDLDNSEDLLNLHLGILI 544 >UniRef50_B8FUW6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FUW6_DESHD Length = 547 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 77/407 (18%), Positives = 158/407 (38%), Gaps = 26/407 (6%) Query: 2 AGWHLDTKMAQ----DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLV--- 54 +L ++ Q I+A + + ++ ++D +++ S + H + + Sbjct: 139 FTRNLTEQITQGYGLSILAELKKTLGVDLFLLDKHFKVL-SWEGGGRFPFHPVSFVTPKL 197 Query: 55 -------LSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGEL 107 L + I PL ++G IGL E L G L Sbjct: 198 SHFKSMDLLLETPLGIGKWNDAQYK-ELPLSWYPLAGHQGVLGYIGLGIEQGELNPVGRL 256 Query: 108 V--CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTE-WAQRLGIDLNQPR 164 + E ++ + + + + + +L+ ++ + + + G+DL +P Sbjct: 257 FLYKAAVLLYFELAKAQSVEDTERQHYRDFLFDLLYNNFDSLEVVQSRGKLWGMDLTKPH 316 Query: 165 VVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN--NLVAIVSLTEMVVLKPALN--SFG 220 +V + E+ +A Q+L + ++T R+ + + ++V+L P Sbjct: 317 LVVVGEIPGYDPDSMDQLAF-QELLDTVSTALRSQPRTIFLERNDQIVLLYPLEGMIPLS 375 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 +W+A + LI + +GN + I RS++ AK+ + +G+ + Sbjct: 376 QWEATAKKLLSPLLILLEGLEEERSMMFGVGNLYPSARFIHRSFQEAKSALELGQLFNLQ 435 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLL--RRTLAAWFRHNVQPL 338 R +QDL + LL +L + L L D L TL A+ + Sbjct: 436 ERVILFQDLGVMRLLLNLEQQELEDFRNEVLGPLLKFDQENNLHLEETLLAYLASDGDLN 495 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 LF+H NTL YRL + +E+ DL + + R+ L++AL++ + Sbjct: 496 LAGDRLFLHPNTLRYRLKKAAEVLDRDLNSLETRMNLFIALKIGRLK 542 >UniRef50_C9Z018 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=C9Z018_STRSW Length = 592 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 142/385 (36%), Gaps = 41/385 (10%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEG--------ALLVLSQGRVVDI 63 + I + + + V D GR+ R E V +G V I Sbjct: 229 EAITSAVHELTGFPVLVEDRFGRLRSWTGPGRPDPYPEPDPARREEMLREVARRGGPVRI 288 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRL 121 + + LR GE++GV+ L ++ +Y A + LE S L Sbjct: 289 -----------KDRLISVLRPRGEVLGVLALVDPLDDADEYTLFALEHAAISLALEMSHL 337 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 HL + RL ELV +L+ + + ++ G DL++ + V +V+ S Sbjct: 338 RHLAEVELRLHRELVDDLL-GGTDETSAYARSEAFGHDLHRIQYVVVVQWKSQVSDD--- 393 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 A + + + +LV S VVL E + E Sbjct: 394 -AFARTVGRVASAVGMPSLVTRRSDH--VVLVAEGRPHEHALYEALAR----------ET 440 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG- 300 G + + P I Y+ A + V ++ F+ +L L +L Sbjct: 441 GTNDGTIGVSARCDTPDGIPGRYQEALRALEVRRRSRKRYGTTFFDNLGLYRILGPGNEY 500 Query: 301 DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + L +L D + L TL+ +F T+ +L IHR+TL YRL RI Sbjct: 501 RELEAFVQEWLGQLTDYDGRHRTALVETLSRYFDCGGNYAETADSLTIHRSTLRYRLQRI 560 Query: 359 SELTGLDLGNFDDRLLLYVALQLDE 383 E++G DL N +DRL L VA ++ + Sbjct: 561 REISGHDLTNVEDRLNLQVATRVWK 585 >UniRef50_Q9KC39 BH1735 protein n=1 Tax=Bacillus halodurans RepID=Q9KC39_BACHD Length = 553 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 75/410 (18%), Positives = 147/410 (35%), Gaps = 32/410 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIG----SGDRERIGELHEGALLVLS 56 + L+ I + D I ++D RG I G S ERI H + Sbjct: 142 LLEMILNGTTFHQIAEHVSHVFDAPILLLDRRGVIRGKSENSDQLERI--WHSSFSHEVI 199 Query: 57 QGRVVDIDDAVARHL--HGVRQGINLPLRLEGEIVGVIGLTGEPEN---LRKYGELVCMT 111 + + + + L +R GEI G + + E ++ +T Sbjct: 200 AYQPSVHAPSGSSKWLHDDESAALQLVIRSAGEIQGYLLIGTASEEHTLEQQMALFEHVT 259 Query: 112 AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVE 170 + L + RL+ + V +L + + ++ A+ LG ++ P + Sbjct: 260 TAVALHFLHEHAAKETEWRLQGDFVWSLAKGDVSSWDTALSRAKSLGYQVHLPYLCLTAM 319 Query: 171 VDSGQLGVDSAMAELQQLQNALTTPERN--------------NLVAIVSLTEMVVLKPAL 216 ++ ++ + L R ++A + ++V + Sbjct: 320 PENISQLYQQDREQIGTFDHWLQGVTRCLEEEAYDVAKSLHLQVMATYAKEYLIVFLEVV 379 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 A + + +Q ++ + + L F + +G S+ A+ + VG++ Sbjct: 380 QDRSTETAYTYIQSFQQRMSLL--FPHLFFSWGISKT-SGYKQFHESFEEARKALTVGRK 436 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLA-RLKTM--DNNGLLRRTLAAWFRH 333 + Y D + +L SL + + E+ L L D L T + R+ Sbjct: 437 QRGPGCQSLYADTRIDRVLFSLIDNQELREMTDSLLHSLLVYSVDRKIDLVNTFQTYHRN 496 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T++ L +HR +L YRL +I LTG L N DD LL ++++L + Sbjct: 497 KSNVSQTARQLNLHRQSLLYRLRKIESLTGCSLNNPDDVFLLDLSIRLWQ 546 >UniRef50_A7B8N5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8N5_RUMGN Length = 372 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 72/382 (18%), Positives = 151/382 (39%), Gaps = 15/382 (3%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ +A+ ++ + + N+N+M+ +G II S + ERIG+ HE A ++ + + Sbjct: 1 MLENSLAEKLIEQVTKYTSYNVNIMNEQGVIIASRNPERIGKFHEVAWQIVHGTTDIMVT 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + GV GIN+ + +EG+ GV+G+TG P+ +R ++ M E +++ Sbjct: 61 END-NEYPGVLSGINMIIEIEGKREGVVGVTGNPDEIRPIALIIKMAIETLIKYENQKMQ 119 Query: 125 LAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + ++ + L Q + P + + A L + R+ + + S A Sbjct: 120 AFRRQTRKDRFMEMLTQKQYRAPQDIQKLAAELNYREDLIRIPILCHLQSA----SDQEA 175 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L ++N ++ + + +++ K D + + + + Sbjct: 176 FLHSIKNGREHLTQD-ISFQMEDRYILIFKTLKGEHLFSDYKFLLADYLKSTLKWMREEE 234 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + +G + T SY+ K + YFY + + S + Sbjct: 235 ICCTFYVGTFQTSFSQYYYSYQHCKW-LET-HIFGEHQAFYFYD--FIGEYITSCIPRQE 290 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 ++ A+ D + + ++N ++ F+H+NT YR N+I E+ Sbjct: 291 LQQIFNVFAQKLPEDFRKNYIEIVGSLIQNNFNIQNAARQCFMHKNTFTYRYNKIREVLR 350 Query: 364 LDLGNFDD----RLLLYVALQL 381 LD D + LY+ L+L Sbjct: 351 LDHQRSMDDTWMLICLYLYLKL 372 >UniRef50_A7Z8F6 PucR n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z8F6_BACA2 Length = 531 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 133/391 (34%), Gaps = 16/391 (4%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGE-LHEGALLVLSQGRVV 61 + K Q ++ + I+ + ++D +++ S R I L + LS Sbjct: 144 NHIMSGKGLQSLLKKLSDILRLPVLLLDQHTKLLSSSHRIPIDTSLLKNICYSLSGPYFT 203 Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML--EQS 119 R + V LP+ + G + + + K L A ++ E Sbjct: 204 CFSMLSDRKAYSV-----LPILNVEKNCGYLVIPELVQTADKGMILTIEQAANVISFELL 258 Query: 120 RLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + + R R E N I + A+ + +Q + ++D + + Sbjct: 259 KENAVKQFSRRARNEFFSNFIDRSFTGHEEIKSRAKEFRLRWDQKYMCICGKLDRNEKTI 318 Query: 179 DSAMAEL--QQLQNALTTPERNNLV---AIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQ 233 +L + + L + + ++L A +S+ A +EQ Sbjct: 319 SFTENQLVSDHVFDLLEGELSSFPFPPHLFIKGNVGILLIEATDSWNEMHA-SVISFLEQ 377 Query: 234 LITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV 293 +++ + + N + ++ A + G Y +P Sbjct: 378 FQKQVRTQFKRTVSFGISNICQKLIDVPDAFTEASDAISSGHLSRSAEFIQIYHAKDVPE 437 Query: 294 LLDSLRGDWQANELARPLARLKT-MDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLE 352 LL L + L L + L TL+ + + Q T+K L++HRNT+ Sbjct: 438 LLRLLPAEDVKKFYQATLQSLADRQKEDQSLLHTLSVYLETHCQISETAKRLYVHRNTVI 497 Query: 353 YRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YRL + EL G L + + + L +AL++ Sbjct: 498 YRLEKCEELLGKSLKDPETTMRLRLALRMQR 528 >UniRef50_Q2RLZ7 Transcriptional regulator n=2 Tax=Bacteria RepID=Q2RLZ7_MOOTA Length = 558 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 73/387 (18%), Positives = 145/387 (37%), Gaps = 30/387 (7%) Query: 24 TNINVMDARGRIIGSGDRERIGELHEGAL-----LVLSQGRVVDIDDAVARHLHGVRQGI 78 + + D + + G+ G + + + VR+ Sbjct: 167 REVVICDEELQPLAVSGAVS-GKGSAGGSLQLPPEEIKRLHSAQKAVEITLWSRNVRRRY 225 Query: 79 NL-PLRLEGEIVGVIGLTGE-PENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELV 136 + P+ + G I + G+ P + L L+ + ++ L+ +L+ Sbjct: 226 FVAPIDVREHRYGYILVDGQTPLSELNQIALEHAVTVTALQMVKEEAVVEARRSLQRDLL 285 Query: 137 MNLIQAEENTPAL-TEWAQRLGIDLNQPRVVAIVEVDS-----------GQLGVDSAMAE 184 +LI L A+ LGI L +P+V+ +++D + Sbjct: 286 EDLIAGALRHRELAISRAEALGILLEEPKVIMAIDIDDFTGYLLHQPGAQEANAGVLKRR 345 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGR--WDAEDHRKRVEQLITRM---- 238 + N+ ++ + +V + PA R D R +++L + Sbjct: 346 FHRAVNSCFMAFDRRVLTVQRSDSVVGILPANGREIRGAEDWRVLRGMLQELAASIQLKI 405 Query: 239 -KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 +E + + + + P I+ Y+ A+T + + ++ + F++D+ L +L Sbjct: 406 ARELDGVTVTIGISSIAADPMEISERYQEARTAIRLARRLNGKGTVAFWEDVELYHVLGQ 465 Query: 298 LRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 G+ L L + N L TL + +A++ L+IHRNT+ YRL Sbjct: 466 -SGETLERFYRSVLGELDRPEVKNREELLETLRVYLECQGNVMASAAKLYIHRNTMRYRL 524 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLD 382 RI EL G DL + D+RL L++AL+ Sbjct: 525 QRIEELLGRDLDSPDERLALWLALKAR 551 >UniRef50_B8FQF7 Transcriptional regulator, PucR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQF7_DESHD Length = 562 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 155/415 (37%), Gaps = 33/415 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGD--------------RERIGE 46 + L+ Q +V + ++ I + DA+ +I + + RI E Sbjct: 143 LINLVLENNTIQTLVNKISELVGNTIIIEDAKLNVIAVSNVEGDIQSNLDSPVFKARINE 202 Query: 47 ------LHEGALLVLSQGRVVDIDDAVARHLHGVRQG-INLPLRLEGEIVGVIGLTGEPE 99 L + G + + H + P+ I G I L + Sbjct: 203 HFRQNVLKSNFYKAVKMGEKKEHLEINLTIPHSEKIRNYMFPIFSNKTIYGFISLLESQQ 262 Query: 100 NLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLRE--ELVMNLIQAEENTPALTEWAQRLG 157 +V + + + L Q + ++ L+ ++I +T + E+ L Sbjct: 263 IYSSTDLMVLKNSSTAIALQLMKQYLNQQTYRKKNLALIEDIIHGRIHTQIVFEY-DFLN 321 Query: 158 IDLNQPRVVAIVEVDSGQLG----VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLK 213 I+L P V +++ L + + + N ++ + + +L Sbjct: 322 INLANPMVAVLMDYAEPNLENNYFWERSEDLITMTIRKHLYKHFNQVIIGNNGSLFTLLV 381 Query: 214 PALNSFGRWDAEDHRKRVEQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMV 272 + ++ VE + + K++G+ +F + +G + P + +S++ AKT + Sbjct: 382 SFQPNQIEKVNSLVKEAVEHALAELAKQFGEDKFSIGIGGAYPQPELVEKSFKEAKTALS 441 Query: 273 VGKQRM-PESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMD--NNGLLRRTLA 328 V K+ ++++ + ++ ++ + L LK D N+ +L TL Sbjct: 442 VAKKCKIRRGNVLLFEEIGIHRIIFMVQDTAKIREFCDDLLLELKKYDEKNSDVLLETLH 501 Query: 329 AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + + T+K +F+H NT+ YR+ +I +L DL + ++ AL+ ++ Sbjct: 502 EFLLCDCVVKETAKKMFVHPNTVTYRIKKIKQLLKHDLALPEFKMAYLFALEAND 556 >UniRef50_C1TND5 Sugar diacid utilization regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TND5_9BACT Length = 538 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 128/323 (39%), Gaps = 21/323 (6%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGE---LVCMTAEMMLEQSRLMHLLAQDSRLREELVMN 138 + L G++ G + + E+L + + ++L R + + +SR R E V + Sbjct: 210 ISLNGKVYGYLLFDCKQEDLAERNCEIPITQAKGAILLYMQRRVAEIQAESRYRNEFVQD 269 Query: 139 LIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE------LQQLQNA 191 ++ + A+ G DL V ++++D+ + + E L+ + Sbjct: 270 ILIHNLRFEGEVWNRAKMFGWDLQGSHCVVVMDIDNYKHQFEKRSRERDFLPMLESTKKR 329 Query: 192 LTTPERNNLVAIVSL-------TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 + +N++ + + + P F + A+ + T +KE Sbjct: 330 IYRICKNHVHGLFESVPYTEMSDSISFILPTEEGFPAFKAKT-TPLFRDIQTSIKEDTHF 388 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL-RGDWQ 303 + +G+ SY A+ + + + +R F++DL +L SL D Sbjct: 389 TVTIGIGSPKDSVFECHHSYDEARKALEMVRAATGGNRVTFWKDLGAYKILGSLYDTDTG 448 Query: 304 ANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + + D L RTL A R+N Q A +K L +H +TL+YR +I +L Sbjct: 449 HSFYREYIGPIIDHDKRRKSELLRTLKAMVRNNWQMKAAAKDLSVHYSTLKYRYAKICDL 508 Query: 362 TGLDLGNFDDRLLLYVALQLDEE 384 D + + RL L ++L+L Sbjct: 509 LEFDPEDSEQRLNLALSLKLYLM 531 >UniRef50_UPI0001C4248F putative transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4248F Length = 410 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 67/404 (16%), Positives = 148/404 (36%), Gaps = 34/404 (8%) Query: 9 KMAQDIVARTMRIIDTNINVMDARGRIIGS------GDRERIGEL--HEGALLVLSQ--- 57 ++ V + + + D+ ++ D RI + V+++ Sbjct: 14 DSLEEFVDTISERLQCPVTIEDSNHHLLAYSSHDDGTDAARISTIIGRRVPEKVINRFWK 73 Query: 58 -------GRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCM 110 + + + G+ + + +R E++G I + L Sbjct: 74 EGVIPTLNQSDEPLIIPQINDIGLGNRVAVSIRKNNEVLGYIWVLEVGRKLTDEDLADLK 133 Query: 111 TAEMML--EQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVA 167 A + +L + + +EL+ LI + + + ++G++ +P V Sbjct: 134 FAASKAKNQLLQLNMQKKKKEKNHQELLWQLITGDARDHKHIADQLSKIGVNPTKPLAVI 193 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 + + ++ D +L + TT + L+ + ++V L + S +D Sbjct: 194 LF---NFEVMSDDLYKKLVYVAK--TTQKVTILIQTLDENQVVFLVSSPASNDF--VKDT 246 Query: 228 RKRVEQLITRMKEYGQ-LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYF 285 ++ VE +++E + G + I RSY A + + + E F Sbjct: 247 KEFVETFKAQVRERFGIMEVTAGCGYAYDNYEWIKRSYDEATKVITLKQTFTKELQSAAF 306 Query: 286 YQDLMLPVLLDSLRGDWQANE--LARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATS 341 Y +L + +D +R + E + + +L+ D + L TL + + Sbjct: 307 YHELGVFRYIDLIRQTIKEQEMTVNPAIRKLEKYDLEHRTNLLETLGIILDKDGNMNEAA 366 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 K L H NTL YRL RI E+ + L + ++ LY+ +++ +R Sbjct: 367 KELHCHVNTLNYRLKRIQEIANIQLKDPVQKIGLYLDMKVYLKR 410 >UniRef50_Q8ELK2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELK2_OCEIH Length = 415 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 72/402 (17%), Positives = 150/402 (37%), Gaps = 42/402 (10%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGE-------------LHEGAL 52 + + + I + D+ +I D+ RI + Sbjct: 20 NQLADSIADLFECPITIEDSNHHVISYSQHKDDIDQVRISTIINRKVPDKVINAFWKKGY 79 Query: 53 --LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCM 110 ++ V I + G+ I + +R + EI+G I + + + Sbjct: 80 MPKLIDSDDPVVIPE---IQEVGLGNRIAISVRKQNEILGFIWAHTSDKTFTEEEVFLFK 136 Query: 111 TAEMMLEQSRLMHLLAQD--SRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVA 167 A +++ L + + L++ + NT + A++ I LN + + Sbjct: 137 EAATYVKKYFLKNRQHNRKSEEGYRDFFWQLLRGDLHNTDDINRQAKQYNIQLNGDKTIV 196 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALT--TPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 ++ D ++++ L+ + N + + + ++L Sbjct: 197 VIRF------SDEVNEQMEKHAYYLSESQVKVNVITRLFDDNDFIMLVGLPKESNSKQL- 249 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGN-YFTGPGSIARSYRTAKTTMVVGKQRMPE-SRC 283 ++QLI R+ E L + G + P I +S+ AK + + +Q + Sbjct: 250 -LYDFIQQLIQRIGEQLNLNTVLGAGGLRYEQPQLIEQSFHQAKNVLKLQEQIPERLNDI 308 Query: 284 YFYQDLMLPVLLDSLRGDWQANELARPL-ARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 Y+DL + +D+L + P RL++ D + L TL + + + Sbjct: 309 LLYEDLGVLQFIDTLAETRKDEHYYNPYMERLRSYDKRHQTSLLETLDIYLQCDSNVYRA 368 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +K LF+H NT+ YRL RI E++G+DL N + + +Y+ L +D Sbjct: 369 AKELFVHPNTMNYRLKRIKEVSGIDLKNANQKTNIYLDLLID 410 >UniRef50_B5CTE6 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE6_9FIRM Length = 554 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 69/401 (17%), Positives = 148/401 (36%), Gaps = 22/401 (5%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVM--DARGRIIGSGDRERIGELHEGALLVLSQGR 59 G + + QDI+ ++D + + + + GD R+ EL E + Sbjct: 153 FGRDITSSKTQDILELLSDMVDNPVTLYYSNLNCYVTSGGDHSRL-ELREDLEEYIPS-- 209 Query: 60 VVDIDDAVARHLHGVRQ-GINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 V+ + + G + + + + E+ + +T + L + A + L+ Sbjct: 210 VITKFSYMRQRKKGTGEIQYVIKISVMEEVEAYLVVTEKNRKLSAMDCMAIENAIITLQY 269 Query: 119 SRLMH--LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV---EVDS 173 + + + ++V N++ + E A L I + V + + Sbjct: 270 GFVTEFVQNEIEKKYHRDIVHNVLSGMLGKEEMEEAANLLEIHSEEYYRVVTFYTFQKER 329 Query: 174 GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD-AEDHRKRVE 232 G + + E ++ + T V ++ ++V+++ R + Sbjct: 330 GDMYTSEQLRETGIIEGEIMTLCPGQHV-YRNIDQIVMIQRVDEKQKREVYLNKMEEMCA 388 Query: 233 QLITRMK-EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM---VVGKQRMPESR--CYFY 286 L ++ + + +V +G G ++ SY AK + + K Y Sbjct: 389 ALQNAIRYRHKTEKIQVGIGKMVKGIYNLKDSYYEAKRAISYRDIAKVISGNENQTVTLY 448 Query: 287 QDLMLPVLLDSLRG-DWQANELARPLARLKTM--DNNGLLRRTLAAWFRHNVQPLATSKA 343 DL LL + + + + L RL + L TL + +N T++A Sbjct: 449 SDLGFFKLLGDIDDLNTLMDYIPESLQRLYSYNKPQRKDLILTLQTYLDNNQSLNKTAQA 508 Query: 344 LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 LFIH T YR+++I ++TG+D N ++ L + + L L + Sbjct: 509 LFIHYKTATYRIDKIGKMTGMDFKNPNEMLNVRIGLILYKM 549 >UniRef50_C1AVZ4 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVZ4_RHOOB Length = 539 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 82/382 (21%), Positives = 145/382 (37%), Gaps = 32/382 (8%) Query: 14 IVARTMRIIDTNINVMDARG--RIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 I + + + DA G R++ + D A G +D + Sbjct: 170 IAETLHEVTGLAVGIEDAFGNLRVLAASDGS------GPAPRYRKVGGGNRVDVLRRATM 223 Query: 72 HG----VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE--QSRLMHLL 125 G I +R ++GV+ L+ A ML + L Sbjct: 224 EGRPLRDDNRIVQLVRPGRTLLGVLYLSDPEHRATDLDTFALEHAATMLAVDMAHRRSLA 283 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 ++RL +L +L+ ++ A A LG DL+ P+ V +V S + Sbjct: 284 ETEARLSRDLGADLLAGTDDDSA-YSRADALGYDLHTPQRVLVVHWGSDTP----VESVT 338 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + + LT + + L+ + VL + D + V + +K+ Sbjct: 339 EAFRRHLTATDSSALLVHGNEHRTGVLTAVM---------DAKADVNTVFASLKKSLGPA 389 Query: 246 F-RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD-WQ 303 + +G+ T P ++ SY A + + KQ + + +L + +LDS Sbjct: 390 VGVIGVGSESTSPSTLPESYTHAIRALDIRKQSLSPHGVALFDELGVYRILDSHSSTGDV 449 Query: 304 ANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + L L D + + TLA + + T++AL IHR+TL YR++RI EL Sbjct: 450 EAFVREWLGPLLDYDREHRSTMTATLAQYLECGGKYDETAQALRIHRSTLRYRMSRIHEL 509 Query: 362 TGLDLGNFDDRLLLYVALQLDE 383 TG DL + D RL L++A + + Sbjct: 510 TGRDLRSVDTRLNLHLAARALQ 531 >UniRef50_C6D3R2 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3R2_PAESJ Length = 559 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 139/406 (34%), Gaps = 34/406 (8%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELH-----EGALLVLS 56 + + K I+ +++ + I +++ + + I R+G A + Sbjct: 144 SEMIMKGKGITGIIDALTKLLSSPILLLNGKLQPIA---ESRLGYTSLMPALAAATDAIL 200 Query: 57 QGRVVDIDDAVARHLH-GVRQGINLPLR--LEGEIVGVIGLTGEPENLRKYGELVCMTAE 113 G + L +R N+ L G + E + L A Sbjct: 201 DGAAIPSSPTSFCLLDVSLRNRCNVLLYPVHTYRHEGYLLSFHPVEKMSNLYGLTLEQAS 260 Query: 114 MML--EQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVE 170 ++ E ++ + + R + E +LI + ++ GI N V+ Sbjct: 261 NVIGMELTKAQAVKERSRRYKNEFFSDLIDGYITSEQEAIHRGKKYGIKANGAWVMLAAR 320 Query: 171 VDS---------------GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPA 215 D + V ++++ + ++ + + + ++L Sbjct: 321 RDGAGWGNGQKDSQTERQDERNVSERDEHYERIKRHFSAIGQSFAMFTKNDSFGLLLH-- 378 Query: 216 LNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK 275 WD +++ L R+ E L + +G T I SY A + G Sbjct: 379 -LPASGWDESIFIQQLAGLSDRLNEEIGLSLSIGIGKPATNALGIRHSYEEAIKALQYGY 437 Query: 276 QRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRH 333 + YQ + L L D ++ L RTL+A++ Sbjct: 438 RLKRTKFVQSYQSKDIGYLFHMLPHDELRQFYEETFYGIRHTEEQERKELLRTLSAFYDT 497 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 Q + TSK LF+HRNT+ YRL++ +L G+ L + + L L +AL Sbjct: 498 QCQLMETSKLLFVHRNTVVYRLDKCEKLLGVKLKDPIESLRLRIAL 543 >UniRef50_B7JD78 Putative uncharacterized protein n=10 Tax=Bacillus cereus group RepID=B7JD78_BACC0 Length = 740 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 136/400 (34%), Gaps = 26/400 (6%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 D + I + + + D + I D + A + R + Sbjct: 335 DDNNFEGITTMLSSLFQDTVFIFDRFMQPIAFHDE----KDSYLAEHLADLAREERKNQR 390 Query: 67 VARHLHGVRQ---GINLP---LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM--LEQ 118 + H + G +G + + + ++ +L A + ++ Sbjct: 391 MNDTFHITDPNHIDYCFSFWIINGGGNFLGYLAVRRTNGGMDEFDQLTVDLARNICSIQF 450 Query: 119 SRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 + +L ++++ + L+ + + ++A +L + VA++ + + Sbjct: 451 IKQKLVLDTKEQMKDSFISKLLTEKIEDRDNILQYANLYQWNLFKKHRVAVLSISLDEKE 510 Query: 178 VDSAMAELQQLQNAL--------TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 + QQ + +L ++A+ E +++ P + R D Sbjct: 511 LKKGNLLEQQAKKSLIWDLIKTRLPELGTGILAVSHNDEQLLIVPIEDQKKRADT-FWES 569 Query: 230 RVEQLITRMKEYG-QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 + + + + +G SY+ A + + R + ++D Sbjct: 570 MFHSIQKWIHASPIGCQVLLGIGGVTKQLEDYYISYQQAVQALNILDSRFRKKGYALFED 629 Query: 289 LMLPVLLDSLRGDWQAN-ELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKALF 345 L +L L + + + L L TL + ++N + ++ LF Sbjct: 630 LGSYAILHHLNHSTAVELFVKKQIGPLIAYSEGKNIDLYHTLHVFLQNNGNVKSAAEELF 689 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 IHR++L YRL +I L +DL + + R L +AL+L + Sbjct: 690 IHRSSLLYRLEKIESLISVDLNDAEVRFNLMMALKLYDMH 729 >UniRef50_Q0S5V7 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S5V7_RHOSR Length = 470 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 73/386 (18%), Positives = 132/386 (34%), Gaps = 24/386 (6%) Query: 19 MRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID-DAVARHLHGVRQG 77 + D + + GR+ + + +G L GR+ + G G Sbjct: 86 AELFDAAVLICTPDGRVQATAGATPNLQALDGLPLFDPSGRLRTERLHHGLQPAPGTEAG 145 Query: 78 --INLPLRLEGEIVGVIGLTGEPENLRKY--GELVCMTAEMMLEQSRLMHLLAQDSRLRE 133 P+ G G+I L L + L ++ + + A +S+ R Sbjct: 146 QIAVAPVVAGGTDHGLIVAFVAEGGLGPVTVQALERAATVVALAVTKQLAVSAVESKFRG 205 Query: 134 ELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM---------- 182 + + +++ T +TE +L D+N+ VV + E+D + Sbjct: 206 DFLRDVLNGTAGTTAQITEHCAQLEWDVNRSMVVVVAELDPDADPATAGRTTPTPVAGRM 265 Query: 183 --AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 L + + E+V L P S + ED V T + Sbjct: 266 PQQRLTAAWQQVVRRRDRFAPVVGFSHEVVALMPVDGSDTKTVIEDLIAAV----TGDRG 321 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 G+ F + I ++Y A+ + VG++ + L + LL + Sbjct: 322 GGRHSFCTGVSRVIDSVAGIPQAYAQARKAVTVGRRMRGNGTVAHFDGLGVHRLLSLVDD 381 Query: 301 DWQANELA-RPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + A L L D LR+TL A N T++ L H NTL YR+ ++ Sbjct: 382 SAELQAFASEVLGSLADDADEAIDLRQTLQALLDTNCNVAETARVLHFHYNTLRYRIGKL 441 Query: 359 SELTGLDLGNFDDRLLLYVALQLDEE 384 + G + RL + +AL++ E Sbjct: 442 ESIVGPFTTDPILRLDVALALRVVEM 467 >UniRef50_B8FTC8 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FTC8_DESHD Length = 406 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 62/395 (15%), Positives = 139/395 (35%), Gaps = 14/395 (3%) Query: 1 MAGWHL-DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR 59 M L + + A RI+D + + + ++ S H + + Sbjct: 9 MQELALASGQGLDQLSAVLARILDHPVLISSSAYKLFSSSSHYDFESFHIYSNQPRTGSD 68 Query: 60 VVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK--YGELVCMTAEM-ML 116 + + + + G + G +G I + + ++ + L+ A + + Sbjct: 69 ALFTCHILTDTMQSLALGRVVAPF--GRTLGYIFMLTDDDSPDPTHFKPLLDYAASLCAV 126 Query: 117 EQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 + L + S+ + + +LI + + + G + +P + + + Sbjct: 127 HLQNRLELKQEQSKFKNAFLYDLIYGNLKRNDEIIATGELWGWNFRRPHTIMVFLLPEPD 186 Query: 176 LGVDS---AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 + ++ N I+ E+++ P E+ + Sbjct: 187 FYTTEWHLMDVLSRIVEQNFIEIYYKNPAVILRQNELILFVPMQTDKPAVQTEELLVFAD 246 Query: 233 QLITRMKE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 +++++++ + +G ++ + RSY+ AK + +GK F++DL L Sbjct: 247 KILSQVQNTELKGLAACGVGQAYSEATVLFRSYQEAKVALEMGKLLGI--PIPFFRDLGL 304 Query: 292 PVLLDSLRGDWQANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 +L L L D + L L ++ + T+KALF+H NT Sbjct: 305 ERILYKHDLQDLKEYYLHVLGELHKQDDQDSSLVTILESFAENQFDVGKTAKALFMHPNT 364 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 L YRLN+I + G L + RL + A ++ Sbjct: 365 LRYRLNKIENILGKPLTDNHARLDIMAAFKIKRLH 399 >UniRef50_D1A7Y9 Transcriptional regulator, CdaR n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A7Y9_THECD Length = 538 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 70/408 (17%), Positives = 130/408 (31%), Gaps = 34/408 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L Q++V +++ + MD R++ + H A+L Sbjct: 140 LVQIVLSGGGLQEVVDEVAALLEVAVVAMDGERRMLAGCGPD----EHLRAML------- 188 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK---YGELVCMTAEMMLE 117 A + + +P+ G G I G LR G L + L Sbjct: 189 EWDGPADPAGPVTDGEHLMVPVLAGGLDHGRIVAYGAGGGLRASDVVGILERAATVVALL 248 Query: 118 QSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 ++ + A +S+ R + + +++ + G DL++P V + E+D Sbjct: 249 ITKQQAVAAVESKYRADFLRDVLAGRAGEDGQVIAHCSGFGWDLDRPMTVLVAELDGRDD 308 Query: 177 GVD----------------SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG 220 D L ++ + E+V + A G Sbjct: 309 AADGTGGRAGRRDRGADERLVQERLAAAWTSVVRRHDRHAAVAGFANEVVAVVGAPEEGG 368 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 R + + F + T P + +Y A + VG+Q Sbjct: 369 AAPDPAVLVREAAAVFSEPHGARHTFSTGISRTVTSPSRLPEAYEQAVKAVRVGRQMHGA 428 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARL--KTMDNNGLLRRTLAAWFRHNVQP 337 + L + LL + + + + L L LRRTL N+ Sbjct: 429 GARVHFDQLGVYRLLSLVPDPAELHAFVRETLGELACDDEPEAVDLRRTLQVLLETNLNV 488 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 T++ L H NTL YR+ ++ + G + RL L +AL + + Sbjct: 489 AETARRLHFHYNTLRYRIGKLERMLGPFTEDAHLRLNLTLALHVLRMK 536 >UniRef50_A8RX21 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RX21_9CLOT Length = 563 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 148/399 (37%), Gaps = 30/399 (7%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 K +I+ ++I + V + + + D + V D Sbjct: 165 TGKGVDEILDVLSKLIRNPVAVYNQNLTCLAATD--------QAPREFAVSRDAVPFDPG 216 Query: 67 VARHLHGVRQGINLP-------LRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS 119 + +RQ +P + +I V+ +P + E S Sbjct: 217 TYSNYTYMRQKGEVPQCLIQVKMSFREKIYLVVTELNQPFGTMDCIAAESAITALRFEFS 276 Query: 120 RLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 R + + + + +++ N++ + ++ L + LG+D+N V + + + + Sbjct: 277 RQYAVTELEKKFQNDIIHNILNGKIHSMGELQKNTSLLGVDINGSYRVIVFGMTNESMAR 336 Query: 179 DSAMAELQQLQNALTTPERNNLV---AIVSLTEMVVLKPALNSFGRWD-AEDHRKRVEQL 234 A+++ + + L+ R+ + L ++VV++ + + + +K EQ+ Sbjct: 337 GDFKAKVKDI-DVLSDLIRSRISKAKIHNDLDKIVVIQEVEREQTQEEYRKSIKKIAEQV 395 Query: 235 ITRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTM---VVGKQRMPES--RCYFYQD 288 + Y L+ + G G ++ S++ A V + + + + D Sbjct: 396 QADVARYNKYLKIKAGAGRVVDGIINLPESFKEANEAFMFVDVAGETPEDGGPQVMLFAD 455 Query: 289 LMLPVLLDSLRGDW-QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALF 345 L + LL L + L +L L TL A+ N+ T++ L+ Sbjct: 456 LGIFKLLCQLSDPSMLLEYVPEGLQKLYNYKKPQRDDLITTLRAYLDRNLNLSKTAQDLY 515 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 +H T YR+ +I +LTG+D N ++ L + + L + + Sbjct: 516 VHYKTAVYRIEKIEKLTGIDFDNANEVLAVRIGLVVYKM 554 >UniRef50_Q0SGQ4 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SGQ4_RHOSR Length = 534 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 147/380 (38%), Gaps = 31/380 (8%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 I ++ + + DA G + R+ + AL G +D + G Sbjct: 168 IAETLHQVTGLAVGIEDAFGNL-------RVWAGPDKALRYRKIGGGNRVDVLRRAAMEG 220 Query: 74 ----VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRLMHLLAQ 127 I +R ++GV+ L+ + A + ++ S L Sbjct: 221 RPLRNDNRIVQIVRPGQTLLGVLFLSDPEHRATDLDRVALEHAATMLAIDMSHRRSLAET 280 Query: 128 DSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187 ++RL +L +L+ ++ A A LG DL+ P+ V V + + Sbjct: 281 EARLSRDLGADLLAGTDDDSA-YSRADALGYDLHTPQRVLAVHWGPDTP----VESVTEA 335 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRF- 246 + LT+ + + L+ + +L + D + V + T +++ Sbjct: 336 FRRHLTSADSSALLVHGNEHRTGILAAVM---------DAKTDVNIIFTALEKSLGPAVG 386 Query: 247 RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD-WQAN 305 + +G+ T P + SY A + + KQ + + +L + +LDS Sbjct: 387 VIGVGSECTSPSGLPDSYTHAIRALEIRKQSLSPRGVALFDELGVYRILDSHSSTGDVEA 446 Query: 306 ELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + L L D + + TLA + + T++AL IHR+TL YR++RI ELTG Sbjct: 447 FVQEWLGPLLAYDREHRSTMTATLAQYLECGGKYDETAQALRIHRSTLRYRMSRIHELTG 506 Query: 364 LDLGNFDDRLLLYVALQLDE 383 DL + D RL L++A + + Sbjct: 507 RDLRSVDTRLNLHLASRALQ 526 >UniRef50_P71073 Uncharacterized protein yukF n=14 Tax=Bacillaceae RepID=YUKF_BACSU Length = 422 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 145/400 (36%), Gaps = 35/400 (8%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHEGAL 52 +D+ ++ I + D +++ D R I +L + Sbjct: 29 EDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTDPARTSTIIGRRVPEKVINKLWKDGT 88 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA 112 + I G+ + + + +++G I + L L A Sbjct: 89 IPALLKTDQPIRVKQIDE-VGLSNRVAISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMA 147 Query: 113 EMMLE--QSRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIV 169 ++ +L ++ +E ++ + + + +LG+ V I+ Sbjct: 148 AKAVKNKLLKLQIRKTKNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMII 207 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 ++ + +LQ LQ L+A V E+++L +D ++ Sbjct: 208 RINGE--LTEKIEQQLQYLQETTQQVY--VLLATVDSNELIILTSPKTDHPF---QDLKQ 260 Query: 230 RVEQLITRMKEYGQL-RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQ 287 ++KE ++ ++ G + ++RSY+ A + + ++ E + + Sbjct: 261 FALSTQKQLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFAEETKHLFSFS 320 Query: 288 DLMLPVLLDSLRGDWQAN-ELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 +L + LD L + L++L+ D + + TL + + SK L Sbjct: 321 ELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNMVETLERFIEADSNVNTASKLL 380 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 IH NTL YRL RIS++ +DL N + + +Y+ ++L Sbjct: 381 NIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYLDIKLRHM 420 >UniRef50_D2LXR4 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXR4_BACS4 Length = 417 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 67/402 (16%), Positives = 149/402 (37%), Gaps = 36/402 (8%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGS------GDRERI-------------GELHEG 50 +++V + ++ + + DA ++ D+ RI + + Sbjct: 17 SLENLVDKISDVLSCPVTIEDANHNLLVYSSHDERTDQARIATIIGRRVPEKVINQFWKN 76 Query: 51 AL--LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELV 108 + +L V + + + G+ + + ++ +I+G I + + L + Sbjct: 77 GILPKLLETNNPVRVPEIIDM---GISNRVAISIKANNDILGFIWVLEINKQLSDNDLAL 133 Query: 109 CMTAEMMLEQSRLMHLLAQDSRLR--EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRV 165 A L + + + + +E L+ +T + +L I Sbjct: 134 LKMAAETARNQLLQRQVRKQKQTKGYQEFFWQLLTGHLTSTEEIVNKFDQLEIIPPSSFF 193 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 + I + D + E + + LT ++ V V ++L + +D Sbjct: 194 IVIFSFNH-----DITLEEERHISYLLTISQQIRTVFYVIDGNELILLSTTVNDNDFDIN 248 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES-RCY 284 K++ GN + +I SY+ A T + + KQ E + + Sbjct: 249 FSSFLTNFTSQMKKKFSIDDIISGAGNKYNKYENIETSYQQAITVLNLKKQYPDELIKTH 308 Query: 285 FYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATS 341 Y+ L + ++ L+ + + + + L++ D +N L TL + + + Sbjct: 309 TYEKLGIFRYIEFLQQKNKVDNYYNQAILNLESYDQNHNTHLLHTLDTFLSMDSNVNEAA 368 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 L IH NTL YRL RISE+ ++L N +++ L+V ++L + Sbjct: 369 NQLHIHTNTLLYRLKRISEVGKINLKNMNEKTSLFVDMKLYK 410 >UniRef50_D2B3U7 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3U7_STRRD Length = 520 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 76/391 (19%), Positives = 135/391 (34%), Gaps = 36/391 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L +++ A ++D + V+D G+++ + H AL +GR Sbjct: 158 LVQVVLAGGGLREVTAEVAGLLDVAVAVLDGAGQVLAAAGPA----EHLAALRGTPEGRH 213 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK--YGELVCMTAEMMLEQ 118 + P+ G G I G ++ G L L Sbjct: 214 TSV-----------------PVVAGGHHHGRIVACGPVGSVSDSDVGILERAATVAALVV 256 Query: 119 SRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 +R + A +S+ R + + +++ + + A+ G DL +P V + E+D Sbjct: 257 TRQEAVNAVESKYRADFLRDVLTGRAGGSERVASRAKAFGWDLERPVTVLVAELDPEGDE 316 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + + A+ + VA S E+V + A GR + E L Sbjct: 317 RVAQDRLVTCWTAAMRRHDPRGAVAGFS-HEVVTIVDAAVDAGRLAKDAAAAFAECL--- 372 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 F G ++ +Y A VG+Q + + L + LL Sbjct: 373 -----PATFSTGASRTAAGAEALPEAYGQALKAARVGRQLHGPAAVAHFDQLGVYRLLSL 427 Query: 298 LRG-DWQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 + D + L L + LRRTL N+ T++ L H NTL YR Sbjct: 428 VNDTDELHAFVRETLGPLAADADAENADLRRTLQVLLDTNLNVAETARRLHFHYNTLRYR 487 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQLDEER 385 + ++ + G + RL L +AL + R Sbjct: 488 IGKLERMLGNFTEDAHLRLNLTLALHVLRMR 518 >UniRef50_D1PIN6 Putative sugar diacid recognition n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN6_9FIRM Length = 378 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 76/363 (20%), Positives = 145/363 (39%), Gaps = 22/363 (6%) Query: 9 KMAQDIVARTMRII-DTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAV 67 ++AQ +V ++ +N+MD RG I+ S + RIG HEGA VL R V I Sbjct: 5 ELAQQLVQTASTLLNGRIVNIMDTRGIIVASTEAHRIGTRHEGACQVLRTRRPVAIHREE 64 Query: 68 ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQ 127 G ++G NLP+ +G+++ V+G+ G P+ +R ++ E Q L Sbjct: 65 LALYPGAKEGYNLPVWNDGQLMAVVGIFGNPDEVRDSAHILAAYTEQFFHQHALDQRARV 124 Query: 128 DSRLREELVMNLIQ--AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 LR + ++ + + + L A+ L + L P V + V S D Sbjct: 125 AGELRSSYLRMVLSTLSPDASEQLAILAEALNLHLRFPVQVLALRVPSVTSPCDQQQLLD 184 Query: 186 QQLQNALTTPERNNLVAIVS--LTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 + ++ + + + +++LK A ++ + ++++ +++ Sbjct: 185 RAIEELIFRRLVAPSCDVWAIMDNRLMLLKSATDTPASP--------LPRMVSALEQALG 236 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL--MLPVLLDS--LR 299 ++ +G T I R+ A + S QD L+ LR Sbjct: 237 RPVQLCVGTPCTSVRQIHRAGAEASLLCDL-----DRSGVLDIQDASCRFFYLMQRTALR 291 Query: 300 GDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 +++ L R +L T A++ + L IH+NTL+YRL+R+ Sbjct: 292 ESDFIDDMLEKLVRQFGDKELDVLLTTACAYYHCCGSVNQAATQLHIHKNTLQYRLHRLW 351 Query: 360 ELT 362 ++ Sbjct: 352 DVL 354 >UniRef50_B5HPQ6 Transcriptional regulator n=4 Tax=Streptomyces RepID=B5HPQ6_9ACTO Length = 569 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 77/373 (20%), Positives = 131/373 (35%), Gaps = 25/373 (6%) Query: 16 ARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVR 75 + + V D G + R + + + A V+ Sbjct: 210 QALYELTGLSALVEDRFGNLRSWAGPGRPDPY---PVRSSTHQEEMLRQAAREPGPVRVK 266 Query: 76 QGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA--EMMLEQSRLMHLLAQDSRLRE 133 + +R G+++GV+ L ++ A + E + L + RLR Sbjct: 267 DRLIALVRPRGDVLGVLALDDPEATADEHTVFALDHAQRSLAQELMHMRELAEVELRLRR 326 Query: 134 ELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALT 193 +L+ +L++ E T A A+ +G DL + V +V A Q T Sbjct: 327 QLIDDLLEGTEETSA-YARAEAVGHDLQRTHYVVVVHWPGNAPDDSFTRAVEQA-----T 380 Query: 194 TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 + MV+L +D + +L G + + Sbjct: 381 AISATRPLITRRGDRMVLL----TEARPYDDAVYTALAHEL-------GTPGGAIGVSTR 429 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLA 312 P I R Y+ A + V + S F+ DL L +L + + L Sbjct: 430 CDSPDDIPRCYQEALRALDVRQNSRQRSGTTFFDDLGLYRILGPGNDLRELEDFVREWLG 489 Query: 313 RLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFD 370 +L D ++ L TLA +F + AL +HR+TL YRL RI E++ DL + D Sbjct: 490 QLIDYDAEHDTELVETLARYFDCGGNYDDAAAALTVHRSTLRYRLQRIREISDRDLADVD 549 Query: 371 DRLLLYVALQLDE 383 RL L VA ++ + Sbjct: 550 TRLNLQVATRVWK 562 >UniRef50_A5UPM6 Transcriptional regulator, CdaR family n=5 Tax=Chloroflexaceae RepID=A5UPM6_ROSS1 Length = 525 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 13/304 (4%) Query: 84 LEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE 143 G G + L G+ + + + LE ++ +LA + RLR + V ++ Sbjct: 221 AAGRNFGYLALCGDTLDDWDRLAAQQGASALALELAKEQAVLAAEERLRGDFVQAVLVGA 280 Query: 144 E-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVA 202 + L + + LG DL QP V + + G D +A + +A Sbjct: 281 ATDDKTLVQRGRELGYDLRQPHVALLCGIVDGD---DRTIARIADALSAALNALGVAAPM 337 Query: 203 IVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIAR 262 + + +++ PA++ R+ V L+ + V++G + +R Sbjct: 338 MRRIDDVLCYIPAVSRGRRFHE------VADLLRQRLVNDIPNVLVAIGREAPTLTAWSR 391 Query: 263 SYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMDN-- 319 S R A+ +++G++ + R + DL + LL LR LA L D Sbjct: 392 SLREAEQALLIGRELVGNGRVLDFSDLGVYRLLLLLRESPELWEFYRSTLATLVEYDRDQ 451 Query: 320 NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 +G L +TL A+F HN T+ AL IHRNTL YRL RI E++G D +DRL L++AL Sbjct: 452 HGELLKTLEAFFEHNGNLARTADALHIHRNTLLYRLTRIKEISGRDPDVAEDRLALWLAL 511 Query: 380 QLDE 383 + Sbjct: 512 KAHR 515 >UniRef50_UPI0001C34F4E transcriptional regulator, CdaR n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34F4E Length = 365 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 10/342 (2%) Query: 43 RIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR 102 RIG LHEGA ++ + V++D +L G + G+N+P+ +EG +GVIG+TG P+ L+ Sbjct: 30 RIGTLHEGAKKLIEKNE-VEMDIYPDDNLSGAKNGVNVPIHIEGRTIGVIGVTGNPQELQ 88 Query: 103 KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE--NTPALTEWAQRLGIDL 160 ++ A +M ++ A +R R L+ + A+ L + + Sbjct: 89 DIAMVIGEMANIMFMNTQQSMKDASLARRRRLFCEELLLNSRLVINSETLKRAEELSLPI 148 Query: 161 NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG 220 + + + + + + + + LT+ R L V + + + F Sbjct: 149 QRVQSIGVFHIPEFISETERL-----AIDDKLTSLLRTFLGDSVYIHHHHIGQNLAVFFH 203 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 + +I + Q+ L P I +Y A+ M + Sbjct: 204 FRAKGSAVAHINAIIRELSMQKQIHIFCGLSCCVKDPSQIHTAYLYAEKAMEIASHAGI- 262 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLAT 340 S+C Y++L L +++ L D L LA +F N Sbjct: 263 SQCLIYENLALEIIISQLSPDSIHAFLDNVWKD-AEPGQRNQAADFLAVYFDSNGSLDQI 321 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 ++ L+IH+NT++Y++ +I +LTG D D +L++A +L Sbjct: 322 AQKLYIHKNTVQYKIKKIIDLTGYDPRLPKDAAVLFLAYKLL 363 >UniRef50_Q1AUG4 Transcriptional regulator, CdaR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUG4_RUBXD Length = 564 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 160/405 (39%), Gaps = 36/405 (8%) Query: 15 VARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGV 74 R R++ + V DA GR++ G+ + EL E L S+ VD R + Sbjct: 145 AERISRLLGRRVVVEDAVGRLVAGGEDNPLRELLEREELRASRPSGVDETRRDRRDRYAR 204 Query: 75 RQ--GINLPL--------------RLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE- 117 +++P+ G G + + E L +V A +LE Sbjct: 205 LPDGFLSVPVERWRVAGRELFWVPLGGGSPAGYLWVDCEGSPLGTGDVIVLYWARRVLEG 264 Query: 118 -QSRLMHLLAQDSRLREELVMNLIQAEENTPALT-EWAQRLGIDLNQPRVVAIVEVDSGQ 175 R L + +R +L+ +LI + L + A LG DL++ + AIV++D Sbjct: 265 ALGRERIRLETELGMRGDLLDDLIAGHYGSVDLLLQRALYLGADLSRGALAAIVDIDEFA 324 Query: 176 LGVDSA---MAELQQLQNALTTPER--------NNLVAIVSLTEMVVLKPALNSFGRWDA 224 ++ +Q+L+ L R L+ S ++ L P+ + Sbjct: 325 RYLERRRLKEPAVQELKRRLADAVRLQARQLFSGFLLGPRSDNVILFLPPSPEAPPDTLR 384 Query: 225 EDHRKRVEQLITRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 E + ++ ++ L V +G Y P + +Y A+ + +G + S Sbjct: 385 ERALELSGRVQRYVRGLLPDLTVSVGIGRYREDPAELPEAYSEAEMALRIGHRIKGPSSV 444 Query: 284 YFYQDLMLPVLLDSL---RGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPL 338 +++ LL + + + A + D L +TLA++ R++ Sbjct: 445 STFEETGTYKLLFRVLQESPEELESFYAETVEPAVRYDLRYGTGLVQTLASYLRNDASTS 504 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T+ LF HR+T+ YRL RI ELTGLD+ +DR L + ++ + Sbjct: 505 RTASELFTHRHTIRYRLERIRELTGLDVDRSEDRERLALGIKAMQ 549 >UniRef50_A5D0M4 Sugar diacid utilization regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0M4_PELTS Length = 390 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 151/372 (40%), Gaps = 31/372 (8%) Query: 40 DRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPE 99 D I E A + + ++ L +G +PL G ++G I + E Sbjct: 15 DEPFIKEEALIAGEQFPALIQDGLSENISLLLGQEIEGSEIPLEYGGHVIGSIKICREEG 74 Query: 100 NLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE--ENTPALTEWAQRLG 157 ++ ++ EM+L+++ L+ ++S+ +E V L+ + + P L + LG Sbjct: 75 QVKGTLDISRSVIEMLLKKAFLVEEQQRESQAKELFVSQLLNQKSSQPNPTLNILGRILG 134 Query: 158 IDLNQPRVVAIVEVDSGQLGVDSAMAELQ------QLQNALTTPERNNLVAIVSLTEMVV 211 DL P+VV IVE + + D + + ++ +V +VV Sbjct: 135 YDLEDPQVVFIVEFEKKESLNDRSPEWNRLRSIAIKIIENFFKFSGGFIVVSYFSGRIVV 194 Query: 212 LKPALNSFGRWDA------------------EDHRKRVEQLITRMKEYGQLRFRVSLGNY 253 LK L +A + E L + + + +G Sbjct: 195 LKNILYEEAGREAGSCKNGGKEKGEVLLRCRKHLISLGESLRQAILLGTKHDVSIGIGEC 254 Query: 254 FTGPGSIARSYRTAKTTMVVGKQRM--PESRCYFYQDLMLPVLLDSLRGDWQANELARPL 311 G ++ SY+ A + +GK +S Y D L LL + + + + R L Sbjct: 255 HRGVLAVRHSYQEAYLALNMGKYFKEVRQSNIYHISDFALESLLSRICDEEKERFIERYL 314 Query: 312 ARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDD 371 +K L+ TL A+F++N+ ++ F+HRNT YRL++I LTGL+ +F D Sbjct: 315 GSIKDEK---ELQETLEAFFQNNLNIAQAAEKAFLHRNTFTYRLDKIQSLTGLNPRSFYD 371 Query: 372 RLLLYVALQLDE 383 L+L +AL + + Sbjct: 372 ALVLAIALIMKQ 383 >UniRef50_A8RLU1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RLU1_9CLOT Length = 382 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 81/374 (21%), Positives = 153/374 (40%), Gaps = 24/374 (6%) Query: 4 WHLDTKMAQDIVARTMRIID-TNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 + MAQD V T ++ IN+MD G II S ++ERIG H+GA V++ G+ V Sbjct: 1 MLEFSSMAQDFVEATSSLVGGRTINIMDREGTIIASTEQERIGTFHQGAAEVIATGKPVL 60 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLM 122 I+ G ++G N+P+ L+ E++GV+G+ G E + L+ + Q + Sbjct: 61 IETKDLPRYPGAKEGYNMPIFLKDELIGVVGIFGCEEQMLNVANLLKVYVTQHFAQQAMA 120 Query: 123 HLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 +S +R L+ L+ + + + + + + L P V ++ + + Sbjct: 121 QKQNVESEVRNRLLSLLLLGDIGQMETIYQLSALIPVQLAFPVKVIMIRAGKRKNTREQM 180 Query: 182 MAELQQLQNAL--TTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 Q QN + T +R+ V + + +++ A ED K + Q++ Sbjct: 181 NHYTQLFQNMMWQGTLDRSRDVFGIQNNDCIIIHSAPR--HGKADEDLDKIIAQVVR--- 235 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD--LMLPVLLDS 297 + +++ I + + T + + +D + + L+ Sbjct: 236 ---EEGLCIAVSGACPRLEDIPGGMKESNTLISM-----EGGPVRNLEDSQVKIQYLIYK 287 Query: 298 ---LRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 G A L R L + +L T +++ N S+ L +H+NTL YR Sbjct: 288 SLIHGGTKYAEMLYRKLTASQDARQAEVLLVTARVYYQENGSVQKASERLHLHKNTLLYR 347 Query: 355 LNRISELTGLDLGN 368 + R+ +L DL N Sbjct: 348 MKRLFQLL--DLEN 359 >UniRef50_A8VUR2 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUR2_9BACI Length = 583 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 113/322 (35%), Gaps = 19/322 (5%) Query: 79 NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA--EMMLEQSRLMHLLAQDSRLREELV 136 P+++ G + + + + L A + E +L + Q+ + E + Sbjct: 263 CCPVQMNVYQKGYLIVFLDIDQAGASERLAVEQAMNVIAFELMKLHAVEQQEQIQKNEFL 322 Query: 137 MNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT- 194 ++ ++ L + G+ + + + D + + Sbjct: 323 TEYVEGRFSSEKDLGRRGEGYGLRRSCTYLCVAIRPDHEDELYRGVGQAPESERRLFKNA 382 Query: 195 ----------PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +++V V L P + + K + + M+E+ + Sbjct: 383 IYEQLQIWFDYYFDDVVFFSKNEVYVALIPKPDDEWE---DWLMKGLVTIQKEMEEFLFI 439 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 +GN + S++ A T+ G++ E+ + + LL ++ Sbjct: 440 SISFGIGNPAAQLLQVPDSFKEALETLHNGRRMGQEAFIKWTDTKGVTELLRTVSPQKLR 499 Query: 305 NELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 L L + + L +TL + HN Q T+KALF+HRNT+ YRL + + Sbjct: 500 EFYESTLKSLVLSSKKEDEDLIKTLTVYLEHNGQIAETAKALFVHRNTVIYRLKKCEDKL 559 Query: 363 GLDLGNFDDRLLLYVALQLDEE 384 ++L + DD L AL + E Sbjct: 560 QVNLKHADDIHKLRTALLVREM 581 >UniRef50_C4ZD57 Transcriptional regulator, CdaR n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZD57_EUBR3 Length = 365 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 138/381 (36%), Gaps = 25/381 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 + + + + I + + A+G+ + G + E + + + Sbjct: 1 MITNQKLKKSLEEIKNITSFDAILYSAKGKHL-------TGTVEEPEHSDIFVKEFIVSE 53 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + V I + ++ E+ V+ + Y + M + Q R + L Sbjct: 54 EDVREKND----AIAFAVEIDSELEYVLVMFC------PYTSENLVIGRMAVCQLRTLVL 103 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 + R + N++ + A++L I+ N+ RVV +++ + Sbjct: 104 GESERYDRNNFIQNILLGNMLGSDIINRAKKLHIE-NRKRVVYVIDTGKNSNEIAV---- 158 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +L L + V + +V++K + E L+ + + Sbjct: 159 --ELAKNLADIRSGDFVVAMDEHNVVLVKDVEDIDSPKLQEKLSSIAGSLVDNLLAEAMI 216 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 + RV GN I SY+ AK + VG+ E Y L + L+ L Sbjct: 217 KVRVGYGNPTDVLPKITESYQEAKMALEVGRLFYVEKEIMAYDRLGIGRLIYQLPMSLCE 276 Query: 305 NELARPLARLKTM-DNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + ++ T++ +F +N+ T++ L++HRNTL YRL RI + G Sbjct: 277 MFIREVFGDEVPQILDDEEAMSTISKFFENNLNISETARQLYVHRNTLVYRLERIEKSIG 336 Query: 364 LDLGNFDDRLLLYVALQLDEE 384 LD+ FDD ++ +A + Sbjct: 337 LDIRTFDDAMIFKIATMVLAH 357 >UniRef50_A3TQC7 Transcriptional regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQC7_9MICO Length = 429 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 124/347 (35%), Gaps = 17/347 (4%) Query: 56 SQGRVVDIDDAVARHLHGVR--QGINLPLRLEGEIVGVIGLT--GEPENLRKYGELVCMT 111 GR++ ++ V GV + + + G++ + G L Sbjct: 81 RTGRLIVEEEPVGVRSPGVAKSERTMVRIVAGTSDHGLLAVFTPGRVLTTTDVHGLERAA 140 Query: 112 AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVE 170 A L ++ + A + + R E + + + A LG +L++ VV + E Sbjct: 141 AVAALAITKEQAVSAVEGKYRAEFLRDTLVGRGGAPEEAIAHAASLGWNLDRRMVVVVAE 200 Query: 171 VDSGQLGVDSAMAELQQLQNAL--------TTPERNNLVAIVSLTEMVVL-KPALNSFGR 221 D EL+ LQ T E VA S + +L P + Sbjct: 201 TDEDDAQTSRDGDELRSLQERFVRAWVQAVRTREPKAPVAGFSQEVVALLPAPCSGEGEQ 260 Query: 222 WDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 + +++ G+ F + I R+Y A + VG+Q ES Sbjct: 261 QTVMRSIGEIVKIVRGDGGGGRRTFSTGVSRPVDSVDDIPRAYAEALRAVAVGRQMQGES 320 Query: 282 RCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARL--KTMDNNGLLRRTLAAWFRHNVQPL 338 + L + LL + + + L L + LR+TL N+ Sbjct: 321 AVMHFDGLGIYRLLSLIPDNADLRAFVDEALGELATDAQPSYADLRQTLQVLLDTNLNVA 380 Query: 339 ATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 T++ LF H NTL YR+ ++ ++ G + RL L +AL++ + R Sbjct: 381 ETARLLFFHYNTLRYRITKLEQMLGPFTSDPQLRLTLSLALRIRQMR 427 >UniRef50_C2XK96 Purine catabolism regulatory protein n=2 Tax=Bacillus cereus RepID=C2XK96_BACCE Length = 540 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 144/396 (36%), Gaps = 18/396 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 + + K I+ +I + ++D R I + + GR + Sbjct: 143 SNHIISGKGINMILENLSSLIQLPVVLLDYHLRPI--SEHNNTKASIQSLKKFFINGRKL 200 Query: 62 D---IDDAVARHLHGVRQGINL-PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MM 115 I+ L R +++ P+ + + + G L + L A + Sbjct: 201 PLSTIEIVTFSLLTKTRDTVSIFPIYTQNNQYSYLVIDGFISPLNRSMVLAVEQAANVLA 260 Query: 116 LEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSG 174 E + L R+++E N+I + +T + + + +Q + I ++D Sbjct: 261 FELIKEHSLRQYSRRIQDEFFTNVINSVFSTQDEIINLGKEFNLSFDQKYICIIGKIDIK 320 Query: 175 QLGVDSAMAELQQ------LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 + + + ++ ++ L + N + + V+L + + + E Sbjct: 321 EFTMSFMEYQEEKDLIYDLIEEELNSYTANVHLF-IKDDMYVLLVNCDGIWRQTEKERMI 379 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 ++ + ++ Y Q + N I+ S++ A G+ + YQ Sbjct: 380 SLLKNIQVKIYTYFQKSISFGIANSSEQLLHISHSFKEATDAFYYGEMSGSKEFIEIYQA 439 Query: 289 LMLPVLLDSLRGDWQANELARPLARLKTM--DNNGLLRRTLAAWFRHNVQPLATSKALFI 346 + +L + + L L ++ +L TL+ + + T+K LF+ Sbjct: 440 KEISAILRMIPQEQLKKFYESTLHSLANENEKDHAVLLHTLSVYLETHCAISETAKRLFL 499 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 HRNT+ YRL + E+ G ++ + ++ L L +A ++ Sbjct: 500 HRNTVIYRLEKCEEILGRNIKDPNETLQLRIAFRIK 535 >UniRef50_B8FPE7 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FPE7_DESHD Length = 413 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 68/408 (16%), Positives = 159/408 (38%), Gaps = 38/408 (9%) Query: 4 WHLDTKMAQ-----DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLV--LS 56 + L +AQ ++ R +I++ + + ++ R++ D + + L V + Sbjct: 9 YQLIQDLAQGKGLPHLIWRLSQILNRPVLLTNSVHRVLVFHDPHHLNLDLDEFLYVPPVK 68 Query: 57 QGRVVDIDDAVARHLHG-------VRQGINLPLRLEGEIVGVIGLTG--------EPENL 101 ++ + HG V + LPL +G I + +P++L Sbjct: 69 LDEADFLNRSEHSLHHGQLTLNGQVFPFVYLPLLAGDYCLGYIFVLETYPLADSLKPKSL 128 Query: 102 RKYGE--LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGI 158 + + + ++L + + + R++ + +++ ++ A+ E A+ G Sbjct: 129 SAEDKETIFEASMPLLLCLKNSSEVSLRQEQYRDDFIRDILYNNYDSKAAIHEKAKSWGW 188 Query: 159 DLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 +L + ++++ +A L +L N ++ ++ ++V++ Sbjct: 189 NLQGSLLALVIDLP--DRDFKTAREILPRLFNH------SSPISAYINLQLVIILNINGL 240 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNY--FTGPGSIARSYRTAKTTMVVGKQ 276 + + R+ ++G+ R + +G + +SY+ AK +GK Sbjct: 241 KKVKLKTALNNFINSFLDRLADHGKDRSSIGIGIGSGVPSITDLYKSYQEAKVAWELGKV 300 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDN--NGLLRRTLAAWFRHN 334 +++++ + + R L L D N L +L + + Sbjct: 301 F-DHKSVCYFEEMGFLKFIFTQPARELEEFSQRVLGPLLEYDQAENTGLLDSLRVFIEYK 359 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 Q SKAL++H NTL R+ +I ++TG DL D + +Y+ALQ+ Sbjct: 360 CQIAECSKALYVHENTLRNRIKKIEQVTGFDLRRVDHMVNVYIALQVL 407 >UniRef50_D1C782 Transcriptional regulator, CdaR n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C782_SPHTD Length = 645 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 132/410 (32%), Gaps = 30/410 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRER--IGELHEGALLVLSQG 58 + L + I ++D + V D +++ + I + ++ + Sbjct: 227 LTQVVLTQRGIPAIARTLAHVVDCPVVVYDQFFQVLTAVTPSGEPIDDPPPLTAEMVHRR 286 Query: 59 RVVDIDDAVARHLH--------GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELV-- 108 + P+ +++G + +T Sbjct: 287 GLRPNQPDARAPFELPARTDGDPQPARAVAPIVAGRDLLGYVTITLPSLPAPPLALRAVG 346 Query: 109 CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALT-EWAQRLGIDLNQPRVVA 167 + LE + + R++ L+ + L + A+ LG L +P V Sbjct: 347 HAATVLALEIMKERLEHEVELRMQRGFAAELLTGRFDDVKLVQDRARYLGYRLQEPYQVL 406 Query: 168 IVEVD---SGQLGVDSAMAELQQLQNALTTPE--------RNNLVAIVSLTEMVVLKPAL 216 + ++D +G + A + L+ + LV ++VL Sbjct: 407 VFDIDRPGEAIVGSERPEAAIDVLRQRFAALLQTVATSRTPHALVGGRDDHLVMVLMGVD 466 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 G A+ E + R++ + SYR A+ +++ ++ Sbjct: 467 GPPGELAAQTIGAVRELIAARVQGLSVSVGVG---RVVPQIDQVPTSYREAERALLIARR 523 Query: 277 RMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRH 333 R +Y DL + LL + + + L + D + G+L L A+F + Sbjct: 524 FGGHDRTVYYDDLGVARLLYQVEDTEELIAFAQQRLGPVLRYDERHGGILLTALEAYFAN 583 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +K L IH NTL YRL R+ L + L D L L +A + Sbjct: 584 GQSVPYAAKHLRIHPNTLRYRLRRVESLLNVSLNQVDVLLDLRLACLILR 633 >UniRef50_A5ZWF4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZWF4_9FIRM Length = 359 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 110/292 (37%), Gaps = 16/292 (5%) Query: 92 IGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTE 151 + + G +++ GEL E +LE + + + L+ + Sbjct: 76 LIVWGSEDSVSTIGELAVCQIESILE-------SYAEKNDKNAFMQKLLLGDYTDVEAFN 128 Query: 152 WAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVV 211 A++L I + R V +VE L ++N + + + +I + +VV Sbjct: 129 RARKLHISSSARRAVFLVETRQ-----SKDEHALATIKNIFSARTHDFITSIDNRGIIVV 183 Query: 212 LKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTM 271 +D L+ + + V+ N ++ +Y+ A+T + Sbjct: 184 ----RELTSTETYDDLENIAHMLVDMLGTEAMTQAWVAYSNTANDLKDLSNAYKEARTAL 239 Query: 272 VVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWF 331 +GK E + Y+ L + LL L + +G + +F Sbjct: 240 EIGKIFYAERNVFGYRTLGIGRLLYQLPVSICEMFIQEIFGDESLDSIDGETLAIIRTFF 299 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +N+ TS+ L++HRNTL YR +I + GLDL F+D + +A+ + Sbjct: 300 ENNLNLSETSRQLYVHRNTLVYRFEKIQKRFGLDLRTFEDAMTFKLAMLVSR 351 >UniRef50_A8FH41 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FH41_BACP2 Length = 386 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 127/386 (32%), Gaps = 15/386 (3%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 +LD + + + I + + + GR++ + L Sbjct: 1 MNLDDNQFETL-QKIAERIRHPVYLCNQHGRLLCNSHITSTSPDWIRILPFFQSRTPHYF 59 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA--EMMLEQSRL 121 + + V + L + + + L + +++ A E+ + + R Sbjct: 60 SIIDTKQTYSV-----FSIDLNAQTYEYVVIPSFILPLDETLQVIIEQAVHEISIARMRQ 114 Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 R R E I+ ++ A+ G++++ + I ++D Sbjct: 115 YTAQQTAKRARNEGFRRWIEGASSSQQDDAHIAKSFGLNVDSSYLCMICQLDPYHENTHF 174 Query: 181 AMAEL--QQLQNALTTPERNNLV--AIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 +L +Q+ + L + ++ + +MV++ +E ++Q+ Sbjct: 175 LEQQLMIEQVVDLLDSALPHSPFPSFLFVKGDMVIVLMEETGNWSEMSEKLLSFLKQMQI 234 Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296 + ++ Y A + G FYQ +P LL Sbjct: 235 LVSIQVNHTISFGASLTSCRITHLSEGYSEALEALQAGHLSAQSEYIQFYQAKDVPDLLK 294 Query: 297 SLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 + L L + L T++ + + T+K L IHRNT+ YRL Sbjct: 295 LIPRKDLVTFHQMHLHPL--YEAGQNLLHTISVYLETHCHISETAKRLSIHRNTVIYRLE 352 Query: 357 RISELTGLDLGNFDDRLLLYVALQLD 382 + EL + L + + L L +AL++ Sbjct: 353 KCEELLRISLKDPEVTLRLRLALRIQ 378 >UniRef50_Q2RGP6 Transcriptional regulator, CdaR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGP6_MOOTA Length = 393 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 85/392 (21%), Positives = 154/392 (39%), Gaps = 32/392 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ ++ Q ++ R + T I+V+D G+++ S + R+ H L + V + Sbjct: 1 MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQ 60 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + LPL + + G + G + + L+ E +L +R Sbjct: 61 ----------GESYYLPLVINDRVAGWLVWQGGVK--GEVATLLQAALEEILAAARRRDQ 108 Query: 125 LAQDSRLREELVMNLIQAEENT--PALTEWAQRLGIDLNQPRVVAIVEVDSGQ------- 175 +R E LV +L+ E + L A G DLN PR V +++++ + Sbjct: 109 QYFTAREEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPRENRYFNIN 168 Query: 176 -------LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDA-EDH 227 L+Q++ L ++ LVA +V+ K L + Sbjct: 169 LHLGYDVTEEQLKEEILEQIKGDLYLTAQD-LVAYYGREMLVIFKAFLEVENMGRLYQAL 227 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 L +K+ RV+ G+ T + +SY+ A + +G S ++ Sbjct: 228 EVICRHLYELIKDNRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFE 287 Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTM-DNNGLLRRTLAAWFRHNVQPLATSKALFI 346 D++ L+ SL G + L ++ + L T+ A +N+ T++ L++ Sbjct: 288 DILFEALVCSLPGRLRGRYLEPLYQKIVAAGEEGIQLLETVEACIDNNMNIKQTAEQLYL 347 Query: 347 HRNTLEYRLNRISELTGLDLGN-FDDRLLLYV 377 HRNT+ RL RI LTGLD G F L + Sbjct: 348 HRNTVTNRLERIKLLTGLDPGTGFRALFWLKM 379 >UniRef50_A8ML41 Transcriptional regulator, CdaR n=2 Tax=Alkaliphilus RepID=A8ML41_ALKOO Length = 551 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 73/409 (17%), Positives = 160/409 (39%), Gaps = 38/409 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINV--------------MDAR--GRIIGSGDRERI 44 + L+ +DI T + + + +DA G ++ D +R Sbjct: 149 LMNVVLEGGSIEDIGRVTRENLRNPLIIKIGYPEQWFLQLGTVDAEMGGHLL--EDAKRF 206 Query: 45 GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVI--GLTGEPENLR 102 + + + ++I V + +P+ L+ I G I P Sbjct: 207 YDPNSNKSMEYKLNEGIEIIRGVPIR------RMVMPIILKDSIYGHIFSWAANTPLGGF 260 Query: 103 KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQ-AEENTPALTEWAQRLGIDLN 161 L + + L+ + + + ++R R E + +L+ E E A +D+N Sbjct: 261 DLSVLENASTIISLDILKQLSVRDVENRYRWEFLEDLLSMEERRKEKAEEKAHLFQLDVN 320 Query: 162 QPRVVAIVEVDSGQLGVDS-----AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 V+ ++ ++ + + + L+ + + +A + + V+L + Sbjct: 321 DHFVLILIHIEEQEKAIRKDFVHGQTSLYSSLEGLIESHNLKGFIASKTDSLYVLLSFSQ 380 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 + G + K +E+ + + ++ +R+ +G + G + +SY + + VG Sbjct: 381 KNKGNVALKAFSKDLEEFF--IYHFKEVNYRLGVGREYKGLRQVHKSYEDSVKAIQVGTL 438 Query: 277 RMPESRCYFYQDLMLPVLLDSLR-GDWQANELARPLARLKTMDN--NGLLRRTLAAWFRH 333 E + F++DL + +L + + + L D + L +TL +F + Sbjct: 439 LK-ERKIIFFEDLGVYKILCQDHLTEELERFYNKTIEPLVKYDEKKSTELIKTLEYYFEY 497 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 + S+ALF H NT YR+ RI ++TGL++ +DRL L + L++ Sbjct: 498 HGNLKKISEALFTHYNTTLYRIERIKQITGLNIECSNDRLNLEIGLKIK 546 >UniRef50_C6JDT1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT1_9FIRM Length = 362 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 132/380 (34%), Gaps = 28/380 (7%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 + ++ Q + I + ++D+ I S +++ E L Q + + Sbjct: 1 MKI-QQILQKCLTDWKNISQIDFCLLDSDNHIFLSTCDKKLPA--ESKLEEFRQSSALCV 57 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + I ++ + G+ E+ GEL + +L Sbjct: 58 SNTSCCLYK---------IMENHSISYILIVWGKAESTATIGELAVCQVQSLLA------ 102 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMA 183 + + + NL+ + A++L I + R V +VE + Sbjct: 103 -AYAEKSDKNTFMQNLLLGSYSDVDAFNCAKKLHIATSVQRAVFLVETKQTKD-----EN 156 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L ++N + R+ + AI +++ ED L+ + Sbjct: 157 ALATIRNIFSARTRDFITAIDDTGIIII----RELQSTETYEDLESIAYMLVDMLNTEAM 212 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 V+ N + +Y+ A T + VGK + + Y L + L+ L Sbjct: 213 TSAWVAYSNLAEDISRLPDAYKEAHTALEVGKIFYADKNVFGYNQLGIGRLIYQLPVSIC 272 Query: 304 ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTG 363 + + T+ +F +N+ TS+ L++HRNTL YR ++ G Sbjct: 273 EMFIDEIFKEETLDSIDEETLITIRTFFENNLNLSETSRQLYVHRNTLVYRFEKLQRKFG 332 Query: 364 LDLGNFDDRLLLYVALQLDE 383 LD+ F+D L +A+ + + Sbjct: 333 LDIRAFEDALTFKLAMMVVD 352 >UniRef50_C6J053 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J053_9BACL Length = 415 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 75/398 (18%), Positives = 147/398 (36%), Gaps = 36/398 (9%) Query: 14 IVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGELHEGAL-- 52 + + ++ + + DA R++ D R IG L + Sbjct: 19 LAEKISDVLGRPVTIEDANHRLVAYSSHEPETDAARLATIVGRRVPDQIIGSLWRDGVMP 78 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA 112 +L + + L G + +RL +VG I + + + A Sbjct: 79 RLLESEAPIRVAPIQEVGLSG---RVATAIRLGSRVVGFIWVLEAERPFSEREMALFAKA 135 Query: 113 EMML--EQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIV 169 + ++ ++ + L+ + + + AQR+GI L V ++ Sbjct: 136 AQAARTKMAQWQLQRHKEEEAHRDFFWQLLTGHLSNETLIRDKAQRIGITLPPQFHVVVL 195 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 + + ++ L++ L+ R L AI +++ P A Sbjct: 196 QF-AAEVKESWQRQALEK-CAPLSAYSRIVLHAINKNQLILLFAPITADTKDGVASQLGL 253 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQD 288 + L T + ++ G ++ G + SYR A + V ++ E Y D Sbjct: 254 LQQNLRTYFSPHF---LGLASGCLYSEYGRLEDSYREALLLLEVKQRFPKETGDLVIYSD 310 Query: 289 LMLPVLLDSLRGDWQANELA-RPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALF 345 L L + + Q + A LARL+ D ++ L TL + H+ ++AL Sbjct: 311 LGYYRYLPRIWEELQRHGRAGSQLARLRAYDQEHHSELVHTLEVFLAHDSNAKTAAEALH 370 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +H NTL YRL RI+E+ +DL + + ++ LY+ L+ + Sbjct: 371 VHANTLNYRLKRIAEIGRIDLTSMEQKVTLYLELKAER 408 >UniRef50_Q9KBD4 BH1994 protein n=2 Tax=Bacillus halodurans RepID=Q9KBD4_BACHD Length = 735 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 145/394 (36%), Gaps = 18/394 (4%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIG-ELHEGALLVLSQGRVVDIDD 65 + + I ++ ++ + D R + ER G +L A+ ++ + + Sbjct: 338 ERDHFEGITQTLSQLFRKSVLLFDRLMRPMAHEILERDGLDLETLAVQAQAESKQRASRN 397 Query: 66 AVARH-LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQS--RLM 122 P+ G ++G + + E + + +L A + + Sbjct: 398 VPFSFIYEEHIPMTAWPINGGGHLLGYLIIQFTHEEIDDFYQLSIDLALNIYAIQFNKQK 457 Query: 123 HLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 +L ++++ + L+ + E+ ++ ++A DL V+++ ++ Q + Sbjct: 458 LVLDAREQVKDSFLNKLLVEKIEDQKSIIQYANLFHWDLFHSHRVSVLSINLAQKESNKV 517 Query: 182 MAELQQLQNALT--------TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQ 233 QQ +L + +++ E +++ PA G+ K + Sbjct: 518 NLLEQQAMKSLLWENIKTRLSIYDEDILLSSKGDEYILIVPASKERGKPKV-YWAKVYQN 576 Query: 234 LITRMKEYG-QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 + + +++ G + R + +G Y+ A V R + + +L Sbjct: 577 IQSWVEQEGIRARLLLGIGGKTETIHDYFSCYQQAVQVHNVVSHRFRDIGFALFDELGSY 636 Query: 293 VLLDSLRG-DWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRN 349 LL L+ + + + L L L TL + N TS L+IHR+ Sbjct: 637 TLLHHLKNTPATSLFIDKHLQPLLQYSQGRSTDLFYTLRVYLNQNGSIKETSDELYIHRS 696 Query: 350 TLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +L YRL +I L +DL + + R L +A +L + Sbjct: 697 SLLYRLEKIETLLDVDLNDSEHRFNLMMAFKLYD 730 >UniRef50_Q9KDY9 BH1072 protein n=1 Tax=Bacillus halodurans RepID=Q9KDY9_BACHD Length = 403 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 145/401 (36%), Gaps = 28/401 (6%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGS------GDRERIGELH---------EGA 51 Q+ V ++ + + D R++ D RI + EG Sbjct: 5 SFDTLQEAVDVLSLTLNGPVTLEDREHRLLAYSKHSHETDSARIETIMNRQVPDRVIEGL 64 Query: 52 L---LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTG--EPENLRKYGE 106 L+ + + G+ + + +R + ++G I + EP + + Sbjct: 65 WSSGLLQKLNQTDEPIRIPGIPAVGLGNRVAISIRQQQFVLGYIWVLELEEPLTDEQLND 124 Query: 107 LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVV 166 L M + + + + REE +L Q E + Q G L P Sbjct: 125 LKDMVSLIRAMLIKQQETRFRRRLEREERWRHLYQGTETVAEVKRRFQAEGEPL--PERG 182 Query: 167 AIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED 226 +V+ + + L + + + ++ V L +L D + Sbjct: 183 VVVQFFCERTIKEEHEQALSFISEKVKSRILVTFAMLIDGKWTVYLTDSLKKP--LDEQV 240 Query: 227 HRKRVEQLITRMKE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV-GKQRMPESRCY 284 + ++Q I + + +G + + ++ S+ A+ + + G+ + Y Sbjct: 241 VKHFIDQWIRSWNDQFSYANVLAGVGQHCSQLTDVSESFHQAEKVIELKGEFAYELDKVY 300 Query: 285 FYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 ++ +L ++ +E + LA L +TL A+ + + A + L Sbjct: 301 YFHELGFYRIIVD-SVPILESETVQTLAAY-DQKQGTELLQTLEAFLDVDGRNQAAAALL 358 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 +H NTL YR+ RI ELTGLD+ N D++ LY+ L+L R Sbjct: 359 HVHPNTLNYRMKRIYELTGLDVKNMKDKVSLYLELKLRRWR 399 >UniRef50_B4WNM1 Purine catabolism regulatory protein-like family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNM1_9SYNE Length = 563 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 135/421 (32%), Gaps = 38/421 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ--- 57 + L + R ++ +I + +I+ + + +L + Sbjct: 144 LTSLVLHGACLNGLAERLSALLQRSITIESPSFQILATAQASDVDSAWAHSLSIKRTAPE 203 Query: 58 -----------GRVVDIDDAVA----RHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR 102 ++++ L + + P+ + E G I L + L Sbjct: 204 ITAHLTKNKVYQQLIETSKPQRLPAVPALGMTMERMIAPIVVGEESYGYIWLISGVQPLT 263 Query: 103 KYGELVCM--TAEMMLEQSRLMHLLAQDSRLREELVMNLI-QAEENTPALTEWAQRLGID 159 EL L + + A + RL+ + LI + L A+R Sbjct: 264 PLDELALNHGATVAALILVKEQAVQAVEDRLQGDFFSQLIASDRPSLSQLQALAKRFNYH 323 Query: 160 LNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSF 219 LN V +V S++ + LQ+ L+ + L+ + +VL+ Sbjct: 324 LNYAHQVLVVRHSCIAPASLSSLR--RSLQSQLSQSCFSFLLVALESHFAIVLEYHPEQS 381 Query: 220 GRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTG----PGSIARSYRTAKTTMVVGK 275 R +E + + I + V +G+ G + SY A+ + Sbjct: 382 DRLISEKRGEALADKILSTLDQTAENLVVGVGSICMGEVEATKGLLESYEQAQEAAHISL 441 Query: 276 QRMPES--------RCYFYQDLMLPVLLDSL-RGDWQANELARPLARLKTMDN--NGLLR 324 S R ++DL L + L AN + + L D L Sbjct: 442 LLCKRSQSVGVRYPRALAFKDLGLLHWIYHLTPAQRSANAYLQHVRTLVAHDRKRGTQLL 501 Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 TL + H T+KAL++HRNTL R+ I L LDL + L A++ Sbjct: 502 DTLEIYLDHGCSISETAKALYVHRNTLLNRIKSIELLCQLDLRDAVQGFNLNAAVKSYRL 561 Query: 385 R 385 Sbjct: 562 H 562 >UniRef50_UPI0001C3208F transcriptional regulator, CdaR n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3208F Length = 442 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 76/399 (19%), Positives = 138/399 (34%), Gaps = 28/399 (7%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGEL-----------HEGALLV 54 Q+I + + + + D + R++ D R+ + A V Sbjct: 36 QEIADAAAQEVRRPVAIDDRQLRLLVHTEHADDVDDVRLDSILKRPLRPEVLAWVHAHDV 95 Query: 55 LSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK--YGELVCMTA 112 +S R V + G+ + +P+R ++G + LT + L L + Sbjct: 96 VSARRAVRVRPNAEL---GMHARVCVPIRSGEHLLGYLWLTDREQTLTDAELARLDEIAD 152 Query: 113 EMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGI-DLNQPRVVAIVE 170 E + R + L D ELV +++ + + I + + P VV + Sbjct: 153 EAGIVLHRELLLRDLDRSRERELVRDILSEDRGVRRHAAQQLVAFEIVERDGPTVVLVAS 212 Query: 171 VDSGQLGVDSAMAELQQLQNALTT--PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 D A L N + ++ L + ++V+ S R Sbjct: 213 TPGAGATGDELRAPLDAAANRVRRHLAQKRALHLLRPDHVLLVVSCNEPSVRRRGVVALA 272 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCYFYQ 287 ++ + + + RV++G SY A V + Sbjct: 273 EQFRDELATVLDRSHGPVRVAIGGRVDALDGARESYEQALRAATVASHVESRFGAVVSWD 332 Query: 288 DLMLPVLLDSLRGDWQANELARP-LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 +L + LL L L P L L L TL + AT+ LF+ Sbjct: 333 ELGIYRLLAELPVGELGMRLVHPGLRTLLEKPQTHFLVHTLECYLDQAGDAQATAATLFV 392 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 HR TL +RL RI E+ G++L + ++RL L++ L+L + Sbjct: 393 HRTTLYHRLRRIEEVGGINLRDGEERLELHLGLKLARLQ 431 >UniRef50_C7QE98 Transcriptional regulator, PucR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE98_CATAD Length = 609 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 73/454 (16%), Positives = 141/454 (31%), Gaps = 76/454 (16%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELH--EGALLVLSQG 58 +A L+ ++ A I+ + V GR++ E + L + A Sbjct: 161 LAQIALEGGGLAELTAELAHILGGPVLVTTPDGRVLAECGAETVCHLPCFDAAPEDADHR 220 Query: 59 RVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR--KYGELVCMTAEMML 116 + + HG + + +P+ G + L L Sbjct: 221 LRTEAEQPGLTTHHGAQHAL-VPIVAGRVDHGRLVAFAGRRAFDAADVAALERAATVAAL 279 Query: 117 EQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPR----------- 164 + + + A + + R + + +L+ + P A LG D+ Sbjct: 280 AVLKQLAVAAVEDKYRADFLRDLLTGRLDDPQSAAAHAATLGWDIGPGHAPGHSNGGITR 339 Query: 165 ------------------------------------------VVAIVEVDSGQLGVDSAM 182 VV + E+D GQ + ++ Sbjct: 340 TAIGAGNGSPTGANTRADATVTATSAATRPTPKPPTPDSRHLVVLVAELDPGQSVLPASQ 399 Query: 183 AELQQLQNALTTP--------ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 L+ + +R N VA + +VVLK + + + + Sbjct: 400 HALRPARERFAAAWQTVVAARDRTNPVAGFNQEVVVVLKTGDDPDPQ------VRSLIAE 453 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 ++ G+ F + + +Y A+ + +G++ + L + L Sbjct: 454 VSGTGGGGRRTFSTGVSRRVATVADLPAAYEEARRAVRMGRRLNGPGSVAHFDALGVYRL 513 Query: 295 LDSLRGDWQANELARPLARLKTMDNNGL---LRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L + + + AR + D + LR TL N+ ++ L H NTL Sbjct: 514 LSLVPDPDELRDFARQTLKGLAADGDPDAEDLRMTLEVLLDTNLNVAEAARRLHFHYNTL 573 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 YR+ +I L G + D RL L VAL++ R Sbjct: 574 RYRIGKIERLVGPFMERPDLRLDLSVALRILHMR 607 >UniRef50_C7N2C1 Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2C1_SLAHD Length = 435 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 70/411 (17%), Positives = 155/411 (37%), Gaps = 43/411 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGD---RERIGELHE-------G 50 ++ L+ + QD+ +T +++ + DA I+ + + I ++E G Sbjct: 37 VSSMLLEGQSLQDVFDKTQKLLGNPVYFHDAYYNILAFSEGDQDDSIKNVYEFLRRGKMG 96 Query: 51 ALL----VLSQGRVVDIDDAVARHLH--GVRQGIN----LPLRLEGEIVGVIGLTGEPEN 100 A S+G + D +++ GV I + +R IVG + + G Sbjct: 97 ASEIDELASSEGYKLTFDSHGIQYMKKTGVFPDIYDYLYMNVRYHNRIVGRLIVDGASRT 156 Query: 101 LRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN---LIQAE-ENTPALTEWAQRL 156 L V +E + + L++N L++ ++ A+ + + Sbjct: 157 LTYVDRAVAGRLGQFVE-AFYKGQYRGRGSSPDALIVNILGLLEGRNVDSGAVEKRLRDR 215 Query: 157 GIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPAL 216 G D + + ++E G + +L + + ++ +VV+ Sbjct: 216 GWDFKRHMICLVIEF-----GSNDRFQQLGGTVEGILEGLYDRAFSLHYDGRLVVVVNCD 270 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 + D R +K+ F + + F S+ Y A + GK Sbjct: 271 EGCFEGGSFDGR--------LLKQVKGFNFNMGICMPFFQLYSLRSCYEQALFALERGKA 322 Query: 277 RMPESRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRH 333 ++D +L ++ ++ + P LA+L D + TL + + Sbjct: 323 AG--CGVACFKDYVLEYMMSAITDKCSLRTICPPGLAKLAEHDAFSKTDYVGTLKVYLEN 380 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 + P + KALF+HR+T +YR+++I+E+T + + ++ +AL + ++ Sbjct: 381 DCSPSRSCKALFVHRSTFQYRIDKINEITKAEYEDPKTKVAYLMALNIMDQ 431 >UniRef50_A8VVQ4 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VVQ4_9BACI Length = 419 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 131/335 (39%), Gaps = 12/335 (3%) Query: 62 DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT----AEMMLE 117 + + R L Q + L+ EI G + + Y ++ +T ++ E Sbjct: 76 EPAIILDRRLQYQWQAVRFDLKSNDEICGYLFVDEIGMTNFIYEQIKSITGDLSFAVLAE 135 Query: 118 QSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL 176 + LL Q R + + +L+ ++ L A+ DL+ P +V ++ + Sbjct: 136 LKKNKELLHQGRRWKYAFLFDLLYGNIKDEQTLNAHAKTWEWDLSVPHMVLSFQLQNYDQ 195 Query: 177 --GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE-DHRKRVEQ 233 G + + ++Q+ N + + E++V P ++ ++RV Q Sbjct: 196 LLGDEVLLEKIQRTWELFLMRHLINPMILQKRDELIVCLPVDSNIKDLKNSIKVKERVNQ 255 Query: 234 LITRMKEYGQ-LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 L+T F + G + + RSY+ AK +G E F+ D+ L Sbjct: 256 LLTSAATILNQRDFYIGAGRAYHQGIELYRSYQEAKMARNIGIHETGEK-LSFFHDIGLM 314 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNT 350 LL S + L D++ L++ L + ++ T+ +LF+H+NT Sbjct: 315 KLLYSHDRSELHEFYKDTMGELLNHDDDTEAELKKALRTYIEQDLDISRTAHSLFVHKNT 374 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 + YRL +I +L +DL + + VA ++ Sbjct: 375 VRYRLKKIEDLLHVDLSDLSVIMDFAVAFHIETLH 409 >UniRef50_D1UQQ0 Putative transcriptional regulator, PucR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UQQ0_9BURK Length = 604 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 78/386 (20%), Positives = 151/386 (39%), Gaps = 20/386 (5%) Query: 18 TMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQG----------RVVDIDDAV 67 ++D ++ V+D G I S G + A + G R + + Sbjct: 207 LSDLLDASVLVIDFYGGAIFSSRSPDRGMYDQDAWRAVLDGPAGMRLREDVRELTTRNTQ 266 Query: 68 ARHLHGVRQGINL-----PLRLEGEIVGVIGLTGEPENLR-KYGELVCMTAEMMLEQSRL 121 R V +G L PL ++GEIVG + G+ E+ + + + ++ R Sbjct: 267 RRLAFEVSEGQKLSASVEPLSVDGEIVGALLSFGDGEHNDLRMLAIENAKFAVSVQLMRS 326 Query: 122 MHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 + ++R EL +++ + + E A+RLG+ L P + +V+ ++ Sbjct: 327 VIRFRAETRTLTELFFEIVERRWRDANDVLERARRLGLSLTTPTRLLVVDYPHRPAASEN 386 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV-EQLITRMK 239 AE ++ L ++ + I +V L P A +L + + Sbjct: 387 RSAECNRVTAMLAAQQKLVVHTITVGEGLVCLLPLDGGTDESVANAAMTAFGRRLCSTLA 446 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + LG+ F G ++A+ + + + + LP+L+ + Sbjct: 447 PLLGREPILVLGDTFAGLEALAKEWERCWRMIKIARGMGKSGALSVPDLGPLPLLIGAAD 506 Query: 300 GDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + L D ++ TL+A+ RH + A + A+ +H TL YRL+R Sbjct: 507 SPDVRAFMTGTIGPLIEYDQGHHTPYMETLSAYIRHGCRSQACADAMGLHVTTLRYRLSR 566 Query: 358 ISELTGLDLGNFDDRLLLYVALQLDE 383 IS+L G+D+ + R + +ALQL Sbjct: 567 ISDLFGIDVETPERRFAVELALQLHR 592 >UniRef50_B9L341 Transcriptional regulator, CdaR family n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L341_THERP Length = 534 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 142/380 (37%), Gaps = 43/380 (11%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGS------GDRERIGELHEG-ALLVLSQG------- 58 +V ++ +I V + G ++ D R + G A L +G Sbjct: 154 RLVRTLGELLGRSITVEEPDGTLLAYYQRGPYEDAARQVTIESGRAPAWLQEGLAARGYL 213 Query: 59 --RVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML 116 + A G+R+ + P+ L GE+VG++ + E L A ++ Sbjct: 214 PPQGTQPYRVPAIPELGLRERVVCPIWLHGELVGLVWIIEGGEPLSGLDLRAAEHAALVF 273 Query: 117 EQ--SRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDS 173 ++ L ++RL + +I+ + +P E A+ LG D + VA++ + Sbjct: 274 ALLFAQQRELAQLEARLGYAFLNTVIEGRFSGSPEELERARALGYDPARRYRVAVIALGE 333 Query: 174 GQLGVDSAMAELQ---QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 L V++ Q +++ L LVA V + ++ ++ Sbjct: 334 PPLTVEAFQRREQVALRVRRVLRQLAAAPLVATVHDQVIALV----------------EQ 377 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 L +E G GP + RSYR A T + + Y Y+DL+ Sbjct: 378 EAHLERIWQELAGCGLTAVAGRAHAGPDGVRRSYREACTLLEYVSR----PGLYRYEDLV 433 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 L +L + + L+ L L+ + L TL W R A ++ L +H NT Sbjct: 434 LERVLAG-DSEARQAFLSLWLGPLERARHGDRLVETLVHWVRARFSVNAVAEELGVHPNT 492 Query: 351 LEYRLNRISELTGLDLGNFD 370 + YRL + L G DL + + Sbjct: 493 VRYRLEQAGTLLGRDLSDPE 512 >UniRef50_UPI0001C423CB hypothetical protein BpOF4_15855 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C423CB Length = 556 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 72/411 (17%), Positives = 148/411 (36%), Gaps = 32/411 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG---DRERIGELHEGALLVLSQ 57 + + L K QD+ + + + D RG + GS I ++ L++ Sbjct: 142 LLDFILKGKKLQDVCEYVANTLKAPVLITDNRGSLYGSSKQVTSSLITHFNQYLHKQLTE 201 Query: 58 GRVVDIDDAVARHLHGVRQ-GINLPLRLEGEIVGVIGLTG---EPENLRKYGE----LVC 109 ++ + + L + ++ G I + G +P +Y E L Sbjct: 202 NGIIFNHSSTIEWFQYEEDYALVLGVESANQLKGYIIVGGFGPKPFASTEYEEWGKLLKH 261 Query: 110 MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAI 168 ++ + L + + LR++ V L ++ L+ A+ LG LN P V + Sbjct: 262 VSTAIALFFLHETAVKETEWLLRDDFVWELASGGVHSSDTLSSRAKSLGYRLNLPYVSLV 321 Query: 169 VEVDSGQLGVDS--------------AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKP 214 + + + + ++++ + + + E+++ Sbjct: 322 ATPEYFKQRFEQEDKLQMSYDHWLHYQIRQIEEEAEKIAKKQALKAMITYQQDELIIFLE 381 Query: 215 ALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG 274 + A E+ ++ + Y ++F + + G Y+ AK + +G Sbjct: 382 VIFDQAAECAMRFINEFEERLSFL--YPSIQFSWGISKQY-GYHLFQECYQEAKKALTLG 438 Query: 275 KQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARLKTM--DNNGLLRRTLAAWF 331 K+R + D + L++++ L L + N L T + Sbjct: 439 KKRNGRGSRNLFTDTKIDRLIEAMSEVTVLTEFTNHLLDSLIHYSKERNIDLLHTFMTYH 498 Query: 332 RHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 H T++AL +HR +L YRL +I LTG L N DD LL ++ +L Sbjct: 499 SHKGNVSQTARALNLHRQSLLYRLRKIEALTGCSLDNADDLFLLDLSTRLW 549 >UniRef50_A8FAN6 Putative uncharacterized protein n=2 Tax=Bacillus pumilus RepID=A8FAN6_BACP2 Length = 552 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 74/401 (18%), Positives = 143/401 (35%), Gaps = 22/401 (5%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGE--LHEGALLVLSQG 58 + ++ K I + NI V+D + I + + A L+ Sbjct: 144 LTQLNVRNKNVTQITEELAHLTAANIVVLD---VFLHQTAAHLIKDEVTYSPAFGFLTDR 200 Query: 59 RVVDIDDAVARHLHGVRQGI---------NLPLRLEGEIVGVIGLTGEPENLRKYGELVC 109 ++ + + R P+ G+I G I + + + Sbjct: 201 EPIETMPLLKQAEEKGRLVYDTCGSFVLAACPVIAMGDIFGFIVSLKKKDTWHHLDAIAI 260 Query: 110 MTAEMMLEQS--RLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVV 166 A + + + +++++ L+ +++Q + + + E A +L D++ +VV Sbjct: 261 EHAGAVYAIEWLKQKAIQDTENQMQGHLLDDILQQQYTEESYVVEQATKLQYDMSDEQVV 320 Query: 167 AIVEVDSGQLGVDSAM-AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 + +D M L QL ++ + + L + VL PA +AE Sbjct: 321 IYFQFQHQHTQLDHQMMQRLSQLLTSIFERRHISFLLKTRLDSIFVLTPA-GKKAFQEAE 379 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 +R E T + + +G + A+S + A+ + + Sbjct: 380 WYRAAEECRSTWSYFFPVHPIVIGIGRAYDQISLFAKSAKEAQYAARLLPLLKTDESIIH 439 Query: 286 YQDLMLPVLLDSLRGD--WQANELARPLARLK-TMDNNGLLRRTLAAWFRHNVQPLATSK 342 YQ L L +L + + L+ L T L TL + HN ++ Sbjct: 440 YQKLGLYGMLLEMNEAGMNLHDFYVELLSPLLYTKKQGADLIHTLEVYLAHNENIQKSAG 499 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 LFIHR+TL YRL +I TG L + DDR+ L +++ Sbjct: 500 ELFIHRHTLSYRLKQIETRTGCSLKSTDDRMKLQLSIMAYR 540 >UniRef50_C0X821 Sugar diacid utilization regulator n=22 Tax=Enterococcus faecalis RepID=C0X821_ENTFA Length = 337 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 153/385 (39%), Gaps = 58/385 (15%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 LD A IV + M I NIN+MD RG+II SGD RIGE H GA +++ + ++I Sbjct: 2 LKLDKIQANKIVEKLMADIPYNINIMDERGKIIASGDSARIGERHRGAERAINERKNIEI 61 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + G N P+ L I+GV+G++GEP+ +RK+ +LV ++ E+ Sbjct: 62 YKDTSLEKKGT----NEPIILNDHILGVVGISGEPDEVRKFTKLVRSIVLLLTEELNTQQ 117 Query: 124 LLAQDSRLREELVMNLIQAEENTPAL--TEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181 + + + + + +L+ + E + + L+ Sbjct: 118 EREKKKKQKNQFIQHLMHVDSAYSEALKLEALELYNLQLDDQNHCV-------------- 163 Query: 182 MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 L + + L++ + + +V+ + K V + + Sbjct: 164 ---LTKDKRLLSSYYPGHEIFEWENCYLVI---------TSEPPQITKPVTEYL------ 205 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTT-MVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 + + + + A+ T +++ ++ +++ Y +D + + + Sbjct: 206 -------VISSEKATIQQM---VQEAQNTYLLLSFLQLEKAKFYQAEDFFIQGIF-NFPF 254 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + + + + T+ + HN+ TS+ L IHRNTL YRL RI E Sbjct: 255 HIELDFF-ETIQTIYD-----EYYETVIFFANHNLNINETSQVLHIHRNTLNYRLKRIHE 308 Query: 361 LTGLDLGNFDDRLLL--YVALQLDE 383 LTG+D + D L Y A E Sbjct: 309 LTGMDPKVWQDFWKLFYYFAYCFKE 333 >UniRef50_A0R6B7 GAF domain protein, putative n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R6B7_MYCS2 Length = 578 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 125/379 (32%), Gaps = 22/379 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSG--DRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 I A +I I + D + ++ + A + V + Sbjct: 208 IAAVLQGLIGRPILIDDIQHEVLACSVVTTDFPDTTWRAAAEAGTGSSPVPVGQFDGTTY 267 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM--MLEQSRLMHLLAQDS 129 + + L E+ I +L A + LE R + Sbjct: 268 ------LASAVHLGDEVAARIWFPETSIDLDPIMVRAVEHASIVTALELLRCQTAAEVEQ 321 Query: 130 RLREELVMNLIQ-AEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ- 187 RLR EL+ +++ + L + A RLG DL P + + + E Sbjct: 322 RLRGELLSDVLSSGAALSDRLLDRAHRLGHDLTVPHIAIVGAFTGLDPVAERRAYERSLV 381 Query: 188 LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFR 247 L + R V + +V+L PA ++ A + V Q + Q Sbjct: 382 LLAKESAAHRPKPVVAMHAGTIVMLWPAQDAADAAGA---GEVVRQAMRAASADRQATVA 438 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-E 306 V G+ + SY+TAK + V + DL + LL + + Sbjct: 439 VGPGDVASH----RESYQTAKGALQVAIMSGRTAAVVGLDDLGIAGLLLRINDPAALSTF 494 Query: 307 LARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 R LA + D+ L TL A+ + AT+ L IH NT+ RL RI L + Sbjct: 495 ARRTLAPILDYDHAHRTELLVTLRAYLECRQERSATATRLVIHPNTVAQRLRRIESLCSV 554 Query: 365 DLGNFDDRLLLYVALQLDE 383 L + L AL + + Sbjct: 555 TLTDPAVILQFSAALTVYD 573 >UniRef50_C0ZQ97 Putative CdaR family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C0ZQ97_RHOE4 Length = 429 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 74/395 (18%), Positives = 140/395 (35%), Gaps = 23/395 (5%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGEL------HEGALLVLSQGR 59 Q +V T R +D ++ + D + R++ D R+ + E + + G Sbjct: 30 QHLVDTTGRRLDRSVAIDDVQIRLLAYNSHDSAVDSVRMNSVLQRNVSREIVDFIYASGG 89 Query: 60 VVDID---DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML 116 +D V L + +P+R ++G + L + + V Sbjct: 90 REALDLFTVPVNEELGLTLGRVGMPIRYRNALLGFVWLLTSEGEVDEDQAEVLRRTADAA 149 Query: 117 EQSRLMHLLAQD--SRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDS 173 L + EL +++ E + G+ P VV V + Sbjct: 150 AMILHREQLLDELSRSRERELTRDVLSGERSLREDAANRLAEEGLLAAGPAVVVTVLLRP 209 Query: 174 GQLGVDSAMAELQQ---LQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 G + L + RN+ + + +++ + + Sbjct: 210 GDQSTLTERDRLSVAVGVDQLRRRLPRNSAIQLDRPDHSLLIVSVAERSTQTHLDSLIVA 269 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLM 290 + + + V +G T + SY ++ + V + Y+DL Sbjct: 270 ARERVLSESGRQNIECWVGIGEPRTSVADVRESYEESRRSADVAQVVKVLGNVVRYRDLG 329 Query: 291 LPVLLDSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHR 348 + LL L D N + L L + +++ L TL ++ + TS+AL +HR Sbjct: 330 VYGLLAELSEDRLENSIHSGLQSLLSHEDSKSEALLATLESFLDNAGDVKRTSEALCVHR 389 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +L YRL RI E+T DL N DDRL L+++L++ Sbjct: 390 GSLYYRLRRIQEITRADLANGDDRLALHLSLKVAR 424 >UniRef50_A4FJC5 Transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJC5_SACEN Length = 553 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 137/388 (35%), Gaps = 24/388 (6%) Query: 13 DIVARTMRIIDT-NINVMDARGRIIGSG-DRERIGELHEGALLVLSQGRVVDIDDAVARH 70 +I A+ ++ + V+D GR S D +++ L LL V ++ Sbjct: 169 EIAAKLSELLGGVAVFVVDEDGRTRASVHDADQLDRLVAAGLLDRHGRLRVSHLGLGSQA 228 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM--LEQSRLMHLLAQD 128 + + P+ G + G E + + A ++ L+ +R + + A + Sbjct: 229 VAQDLIAVIAPVSAGELRYGRLLAVGPSEQMGPEVTVAVDQAAVVAALDVTRQLAVAAVE 288 Query: 129 SRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVD--------SGQLGVD 179 + ++ +L+ + G DL++ VV + + V Sbjct: 289 RQFASNMLHDLVTGRGADIDGALARGAAFGWDLHRRLVVVVSRAEWALSCGRVKSTDPVL 348 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 + L + + + + A + + V+ A + G Q+ T +K Sbjct: 349 TQQRCLDLWSSEVHSQDPGGAAAGFATDLVAVVGAADDDPGAAA--------RQMWTALK 400 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + F + + P ++ +Y A+ + +G++ + + L L LL + Sbjct: 401 AKTRHEFSMGVSCPVEDPRQLSAAYEQARKALHMGRRTRGPGKVTLFSKLGLFRLLGLID 460 Query: 300 G-DWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 D + L L L +TL ++ S+ L H NT+ YR+ Sbjct: 461 DVDELRGFVDDALGSLLGLERRERAELLKTLEVLLDSHLNVAEASRVLHFHYNTMRYRIR 520 Query: 357 RISELTGLDLGNFDDRLLLYVALQLDEE 384 ++ L G + + L L VALQ+ + Sbjct: 521 KLERLVGPFMSDSRLCLQLSVALQVRDM 548 >UniRef50_B0P9V1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9V1_9FIRM Length = 558 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 140/402 (34%), Gaps = 26/402 (6%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDA--RGRII--GSGDRERIGELHEGALL-----VL 55 L Q I ++ + + +I R+ I E + L Sbjct: 153 MLSGGNLQAITQTLHNRYGNSVAIYNEFFSSYVISAAFSRRDAIYRQMENCVRGSGMNDL 212 Query: 56 SQGRVVDIDDAVARHLHGVR-QGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA-- 112 + + + G I +P+ + ++ G I + + + V + Sbjct: 213 AADFSNTLSRRERCMVDGKECTKITVPIYSDKKLYGYIFMWEDNREITSVDLAVIEASTS 272 Query: 113 EMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEV 171 + L+ + + + ++ + + +L+ ++ + A+ D+ VA+V+V Sbjct: 273 LIALDMIKKISIFEMENNHKVSFLDDLLVNDDLSQRRALANAEYFDFDIEAVHQVAVVQV 332 Query: 172 DSGQLGVDSAMAELQ-------QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDA 224 + + + L ++ L+ L+ + +V++ Sbjct: 333 CNTNNSLSLSNGALYKMNNSIVRVLRRLSRNAACKLLFVNKCDNIVLVFENKLRSTDLCK 392 Query: 225 EDHRKRVEQLITRMKEYGQLRF-RVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 ++ + +E L ++ L F + +G + + +S AK G Sbjct: 393 QEVTQFMETLCGVLRGDSLLEFICIGVGRAYREAADLWKSLAEAKRAASCGPI--DREHA 450 Query: 284 YFYQDLMLPVLL-DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 Y+DL + L + L L D ++ L TL+ +F+ N Sbjct: 451 LCYEDLGVYRFLSYENLQPELLSFYTETLKVLVDYDREHDSELVHTLSLYFKCNGNLKRL 510 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 ++ L +H NT+ YR+ RI EL G+ N D L L +AL++ Sbjct: 511 AEELGVHYNTVAYRIQRIKELAGVSFDNSDQLLNLQIALKIH 552 >UniRef50_A0LVE5 Purine catabolism PurC domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVE5_ACIC1 Length = 601 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 119/378 (31%), Gaps = 11/378 (2%) Query: 14 IVARTMRIID-TNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLH 72 +V ++ + ++D G + D + LL ++ + Sbjct: 196 LVKELSDMLGGAAVAIVDRAGSVRAISDDR--ASFEQAGLLRSDGCIAIERLLDASSPTS 253 Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGE---LVCMTAEMMLEQSRLMHLLAQDS 129 + G G + + + + LE +R + + + + Sbjct: 254 SDAPWSVAKISAGGLEHGYVIAVDGSQRRLPFVRTTAVEQAALVAALEITRELAVASVER 313 Query: 130 RLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 + +L+ +A G +LN+ V + +D + Sbjct: 314 HFASNALHDLVTGGSAGGVDSVAYATTFGWNLNRTVSVIVARQHELPGAIDLHPRARE-- 371 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRV 248 AL + + + A DA + + G F V Sbjct: 372 LAALRVVNQWTSLVRNHDSAAAAAGFAAELVAVVDAGKAEHIARMVRNELVTTGLGNFSV 431 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 + T P I R Y+ A+ + VG + Y L + LL ++ D + + Sbjct: 432 GISGPGTAPDQIPRLYQEARVALAVGNRLTGAGAVTSYSRLGIYRLLCNVGPDDLRSFVI 491 Query: 309 RPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L L + L TL+A + T++ L H NT+ YR+ ++ L G + Sbjct: 492 ETLGPLLRLPQPSRSDLLTTLSALLENRCNVAETARTLHYHYNTMRYRVAKLEHLLGPFI 551 Query: 367 GNFDDRLLLYVALQLDEE 384 + + + + VAL+L E Sbjct: 552 DDAEASMRISVALRLLEM 569 >UniRef50_C0Z511 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z511_BREBN Length = 412 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 69/406 (16%), Positives = 146/406 (35%), Gaps = 41/406 (10%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIG------SGDRERIGEL--HEGALLVLSQGR 59 ++ ++ I V DA ++I S D R + VL++ Sbjct: 13 HADIDELADVIGELLQNPITVEDADHKLIAYSSHGESTDEARWSTIMGRRVPEKVLTRLW 72 Query: 60 VVDIDDA----------VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVC 109 + A+ G+ + + + +R +++G I + + + + Sbjct: 73 KDGVFQELLTHDNPVHIPAKDEIGLGKRVAIAIRRGSDVLGYIWAQEVNRPITQEDDEIL 132 Query: 110 MTAEMML--EQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVV 166 A + + + + R+E + L+ ++ A + + A L + L ++ Sbjct: 133 RQAARVAVSRLIQRQGKRKAEEQRRKEFLWELLLGNHSSEAGIRQKADTLQMQLPTSYLI 192 Query: 167 AIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAED 226 I+E +L Q R+ L+ +V +++++L ++ Sbjct: 193 CIIEAAGARLD-----------QYLYPLLMRDKLLWVVDGSQIILLIGLSDAKKEKSDVL 241 Query: 227 HRKRVEQLITRMKEYG-----QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES 281 RK + L + + + G + I +SYR A + + K E+ Sbjct: 242 IRKVEQFLSDSLGKLEAHVTEGRQVIAGYGRDYKSYTDIVKSYREALHALKIKKLFPQEN 301 Query: 282 -RCYFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMDNNGLLRRTLAAWF--RHNVQP 337 + Y +L + L L+ + + L +L+ D + + Sbjct: 302 EGIHGYHELGIYRYLLQLKQWEEEQGYQNERLEKLRQYDRDNQTTLLTTLETFLDAAGKV 361 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T++ L IH NTL YRL RI E+ +DL N + R LY+ L++ + Sbjct: 362 NKTAERLHIHINTLSYRLRRIEEIMRVDLDNMNQRAALYLELKIAK 407 >UniRef50_C0CN88 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CN88_9FIRM Length = 543 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 66/396 (16%), Positives = 134/396 (33%), Gaps = 14/396 (3%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61 L +++ + I + D G + GS + + E + G ++ Sbjct: 146 YNLVLQNASLNKLLSNLGMALKQPIFIFDLFGSLRGSSNATKQEERMAENSFSMMVGELL 205 Query: 62 DIDDAVARHL-HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 D+ A GVR P+R + + + + V ++ Sbjct: 206 AQDETAAGEENKGVRDYSIYPIRAASYNTHYLMILETEKRMNTVSSFVLEQVLLIFGMYF 265 Query: 121 LMHLL--AQDSRLREELVMNLIQAEENT----PALTEWAQRLGIDLNQPRVVAIVEVDSG 174 + + RE L + ++ L + LGI V I + Sbjct: 266 YKDFYLCYNEIQQRESFWCRLTEQKKKDAGESQNLLLEGKELGIKKCSYYQVIIGRLSQM 325 Query: 175 QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG-----RWDAEDHRK 229 + +++ + + E V++ P S+ + + Sbjct: 326 EGRRFHTPKFMKKEEQYILIYEWLKEQLEGVYHREVLVFPDTTSWSYIFLVQERRHMAEE 385 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 + QL + + L+ S GN +++ SY AK + G+ + + Y+ Sbjct: 386 NMRQLHQYLWQVMGLQLEFSCGNEVYELETLSNSYWKAKASFHNGELKNGVDYIHHYKPQ 445 Query: 290 MLPVLLDSLRGDWQANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 + LL SL + + + L L + + LR+TL + + + T+ LF+H Sbjct: 446 NILELLKSLSDNQIQDVCVQILKSLAYPQDEMSLELRKTLKTYLDCHCSIIETANLLFVH 505 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 RNT+ YR+ R E+ DL + D + + L + Sbjct: 506 RNTIRYRIKRCEEILENDLRDPDYCFQVQLCLVFTD 541 >UniRef50_C9M8Q2 Putative transcriptional regulator, CdaR n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8Q2_9BACT Length = 535 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 124/325 (38%), Gaps = 21/325 (6%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE----MMLEQSRLMHLLAQDSRLRE 133 + ++ + G + L P ++ +L +ML R + + R R Sbjct: 205 LCRKIQSGDNVYGYLFLNSAPGEQKQDRQLQTAAQHAATALMLLVQRDIASREVEYRYRN 264 Query: 134 ELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD------SAMAELQ 186 E V +LI ++ LT A R G DL+ +V++D + D + + E + Sbjct: 265 EFVQDLILNNVKHERDLTRRAHRFGWDLSGWVRAIVVQIDPEKRRPDGSETPYAQLEERR 324 Query: 187 QLQNALTTPERNNLVAIVSL----TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q+ +++ + + + +V L + R R+ + ++ ++ + Sbjct: 325 QMVSSIAVEGIRRVYSKMPYSTMSDAIVFLDFSPEPPSRHIG---REDLLKIQEQIAKRT 381 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL-RGD 301 + ++ G + SY AK + + + + + +L + + + Sbjct: 382 EATVTIATGRFKESAFLAHESYTEAKKALEIVRSLKCGNHIIDWDELGIFSFIAPICNTP 441 Query: 302 WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 N L L D +N L TL A + N Q + L IH NTL YR ++I Sbjct: 442 DAKNFCEEQLQPLIQHDKEHNSDLLITLEAVIKSNWQLKQAADDLSIHYNTLRYRYDKIR 501 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEE 384 EL DL + D RL L +A ++ Sbjct: 502 ELLRADLNDSDKRLSLGIAFKMYRM 526 >UniRef50_C1TQL7 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQL7_9BACT Length = 389 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 71/382 (18%), Positives = 142/382 (37%), Gaps = 34/382 (8%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L + +DI+ + + +L+ G L V S+ Sbjct: 20 LLKSGGLEDILRTIHELSGFDCAF-----------------KLNSGKLHVFSRNTEFFEQ 62 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA-EMMLEQSRLMH 123 H +R + + + +VG + L E+ +L+ + L +R Sbjct: 63 IKTYPHRELLRIFHHTTVSQDNSVVGTLILNRPREDPSSTTDLLENATLALRLLLNRKHS 122 Query: 124 LLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 L + R R+ V +L+ + + L A G DL+ + + D Sbjct: 123 ELKVEQRYRDHCVQDLLFSRIRHPDELENRASLFGWDLSGSVTAVVA----MAVDTDPED 178 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 Q + + L + L+ + +L P+ + + E R +++ Sbjct: 179 RIRQTICHRLRSFYPK-LIFANVGHHLALLIPSSTNGSKEIFETCRYVRDEIT------- 230 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-D 301 L+ R+ +G+ + SYR A + + + + + + +L LL +L Sbjct: 231 PLKVRLGIGDPRSSFIDAGESYREACQAIEIMDRFLKDWAIARWNELGAYKLLSTLAQKS 290 Query: 302 WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + + L+ L D NN L TL A R N + +L++H NT++YR RI Sbjct: 291 DGVDFMRQKLSPLVEYDKTNNTELMATLLAIDRGNWNLRTAADSLYVHYNTVKYRFKRIC 350 Query: 360 ELTGLDLGNFDDRLLLYVALQL 381 E+ LDL + + R + ++L++ Sbjct: 351 EVLSLDLDDNEQRFAVSLSLRI 372 >UniRef50_A6CKX8 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKX8_9BACI Length = 589 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 136/397 (34%), Gaps = 18/397 (4%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIG--SGD-RERIGELHEGALLVLSQ 57 + L ++I +++ + V + ++ S + + + E + + +L + Sbjct: 192 LTSVSLSKGGLEEITLALSKLVHQEVVVFNEFFDVLAISSSEYQTYVQEFLQEEVHILQE 251 Query: 58 GRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGE---PENLRKYGELVCMTAEM 114 + + + + ++++ +G + + E + + Sbjct: 252 VIESEEPLSCFLPRSTISELTFFSIKMDRYKIGYVAIFSEKTSNLDPLDQFAIDQAMTIF 311 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVE---- 170 LE +R+ + + + ++ LIQ N P ++ + + + Sbjct: 312 ALEMNRIEKMTINNFQYSGYVMEKLIQ---NAPDAIAALSQMNFSEYEQHQFVVCKMLMK 368 Query: 171 --VDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 + S + +S + + ++ V ++ + + + + Sbjct: 369 EPLVSFKELTESKSKLTRLIHREISKFRYKTFVLDRNMEIVFMFVLSPYDSKELLIRNVN 428 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 +E + R++E +L +G + S+R K + + Y D Sbjct: 429 DFIEGIQNRLREGLELSSYAGIGRIVGSLQEVHLSFRDTKRCVEY-LLSKQKEGLISYND 487 Query: 289 LMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFI 346 L + L + + L + D + L TL + N+ A++ LF+ Sbjct: 488 LGIQRLFMKTDKEELEEFVQDMLGPILEYDEIRDANLYETLKTYLESNLNMAASAAKLFV 547 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 H NT++YRLN I E+ +D L +ALQ+ E Sbjct: 548 HTNTVKYRLNTIKEILKMDWSAGTSVFSLQLALQIQE 584 >UniRef50_C7PZ25 Transcriptional regulator, CdaR n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZ25_CATAD Length = 383 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 133/391 (34%), Gaps = 34/391 (8%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIG----SGDRERIGELH------EGALLVLS 56 T QD+V ++ ++ + D ++ SG + I + + Sbjct: 5 TTDQLQDLVDLISQLASSSATLEDRDFDLVAFASQSGGLDVIRQRSILQRRSTPEVRAWF 64 Query: 57 QGRVVDIDD----AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTA 112 +G + + A HGV + LP R G G + L +L L Sbjct: 65 EGFGIARSELPVRTPADPEHGVLPRVCLPARWNGVTYGYVWLLDVDGHLDD-ALLASAMH 123 Query: 113 EMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGI-DLNQPRVVAIVEV 171 E + L R+ E L L E LG+ D ++ V ++E Sbjct: 124 EASRAGALLAQQARVRERMEERLQNLLSPDRAVAEQAAEEISDLGLVDRDRKITVVVLET 183 Query: 172 DSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + +++A + +L P A+ + + Sbjct: 184 RNQDWQSVPLN----------LWRLPRSVLAAPETDHISLLVP----EPHSVADIAERAL 229 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 E R++ + V +G S+R A+ + VG+ + DL + Sbjct: 230 ELYRERLESDARKDVLVGIGAPREDLAEARASWREARLAVRVGRAVPTFRPTAVWADLGI 289 Query: 292 PVLLDSLRGDWQANELARP-LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 LL + + P + RL L T+ + H T+ AL IHR T Sbjct: 290 YRLLACGPQRELRDAVVDPAVRRLLE---EPDLLITVQTYLDHAGSAQQTAAALSIHRQT 346 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L +RL +I +TGLDL + DRL L++ + L Sbjct: 347 LYHRLEKIERITGLDLADGRDRLRLHLGVSL 377 >UniRef50_C5ERN2 Predicted protein n=2 Tax=Clostridiales RepID=C5ERN2_9FIRM Length = 413 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 19/395 (4%) Query: 4 WHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63 L+T I+ + +I IN+M+ G I+ S E IGE++ A + Q Sbjct: 6 MLLNTTTTTSILKKLEPLIPYPINIMNCEGMIVNSSVAEHIGEVNTAACKYMEQTH--IP 63 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMH 123 + + + + + G ++G I L P Y L AE+MLEQ LM Sbjct: 64 NPLQPLGDTDMVTSMCHMI-VRGHMIGAIELEKLPAADNTYLVLAKTVAELMLEQEYLMD 122 Query: 124 LLAQDSRLREELVMNLIQAEE-NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 ++ +++ L+ ++ L Q+ G++L+ PR +++ + Sbjct: 123 EQKGNTSSLNDILAILVGVHPLDSSQLIADLQQHGVELSIPRTSLFIQLSKFDILEQPLE 182 Query: 183 AE------------LQQLQNALTTPE---RNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 + ++Q N L + ++ +++ + V+L +A Sbjct: 183 SRKLVLDQKQYQYSVKQFLNQLPSYFYLKQDLVLSDLQEQNAVILSVNRKENPEVNALYL 242 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 + +L K L +G R Y + G+ PE + Sbjct: 243 FELCTRLTEIAKREYCLALHAVIGIQCNKFSDYERQYEQLILRLSSGRLLFPERSVFLGN 302 Query: 288 DLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 ++L + N + RL + +L TL +F + T++ L+ H Sbjct: 303 SIVLGNFIAHSSKKVLQNIVTYVYGRLLVSKMSRILLDTLGMFFECELNLTLTAQKLYTH 362 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 RNTL+ R ++I +LTG + N D L L +A Sbjct: 363 RNTLQKRFDKIEKLTGFSIHNADGLLTLRLAFLCH 397 >UniRef50_B0K668 Transcriptional regulator, CdaR n=9 Tax=Thermoanaerobacter RepID=B0K668_THEPX Length = 350 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 169/383 (44%), Gaps = 39/383 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M G+ L K+A DI + + + ++D G +I G+++ E G L Sbjct: 1 MIGYDLIKKVAYDI----QKNLQMPLYIIDKSGNLI-YGNKDFF-EKKAGFLE------- 47 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + ++ + ++ V + I + + I L + E +K L+ + E +L Sbjct: 48 IKVEYIDEKDIYEVGEFICYNIFYNNVLFFTIALERKDEQSKKVLYLISLIFEQLL---- 103 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 REE ++ + + + ++ +A++ I+ N VAIVE ++ +D Sbjct: 104 -------QKYNREEFLIEALTGKLSVNLVSYYAEKYKINKNVKYTVAIVESNNE---IDD 153 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 A+ + + + N V + + + + + ++ Sbjct: 154 AIKIITNIFDK-----GNLYTVKFDDKRFVTIFSYKGNNS------LIELYKTMKDMIES 202 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 G ++ +++ + F +I +YR A+T +++G++ E Y Y+D P +L + Sbjct: 203 EGYMKVKIASSSSFVPIENIHIAYREAETALLIGQKLEDEKGIYIYEDYSFPEILWGIDI 262 Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + N + + + + L +TL A+FR+++ T++ L+IHRNTL YRL++I + Sbjct: 263 EKVNNFIKKRNIDF-GIFKDEELIQTLNAFFRNSLNLSETARELYIHRNTLVYRLDKIFK 321 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 +TGLD NFDD +LL + L + Sbjct: 322 MTGLDAKNFDDAVLLKTIMILTK 344 >UniRef50_C6D273 Transcriptional regulator, PucR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D273_PAESJ Length = 528 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 139/393 (35%), Gaps = 25/393 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L T ++ II + ++ +RG+I+ + + + ++ Sbjct: 144 LMRMALKTDHINELFDSVADIIGFPMAIVGSRGQIV-----------YNSSQVADTELTG 192 Query: 61 VDIDDAVARHLHG-VRQGINLPLRLEGEIVGVIGLTGEPENLRKYGE-LVCMTAEMMLEQ 118 + + Q +PL + G + L E L AE++ Q Sbjct: 193 SWPWPQQQKWMKSKQWQAFRIPLMKQSRCTGFVLFFNPQLFLSTIEESLYLQAAELLSYQ 252 Query: 119 SRLMHLLAQDSRLREEL---VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 + + ++++ + ++ + E+A R +++ Q V ++ D Sbjct: 253 MNFNYEDYFELSVQKDFGVLIKRYLRNGLPIDKVVEYADRWELEVFQSHYVCVLS-DIAH 311 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVV---LKPALNSFGRWDAEDHRKRVE 232 +L++L++ + + + + +V+ L + + + Sbjct: 312 ASATQRAEKLEKLKSDFLSHTK---LQELKGMHIVMEEGLLSVFSEHDGQAEDSLVSALN 368 Query: 233 QLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLP 292 ++ R ++ + + ++ + T + + + + L Sbjct: 369 VCFASIQRESGESPRAAVSSRKKRADQLYEAFDECRQTQRLASEWRVGQSITSFDTMDLA 428 Query: 293 VLLDSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 ++ + + D R L L D + + RTL + + Q T+K L+IHRNT Sbjct: 429 IVFEHVSKDRMEAFCNRWLGGLVNKDPDYANEMLRTLETYLEQDGQLNETAKKLYIHRNT 488 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YR+ ++SE+ G+D +D L L +A + Sbjct: 489 ATYRIEKLSEILGVDFKKMNDLLRLKIAFLFRK 521 >UniRef50_C6PR88 Putative transcriptional regulator, PucR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PR88_9CLOT Length = 534 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 55/399 (13%), Positives = 133/399 (33%), Gaps = 35/399 (8%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGELHEG-----ALLVL 55 K + IV ++ I V+D +II D + +G + + Sbjct: 126 SGKGIKHIVNVASELLGNPICVIDLSFKIIAHSKDINPSDPIWVELFTKGYCSYNFVPMA 185 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLP-----LRLEGEIVGVIGLTG--EPENLRKYGELV 108 + + +++ + +P ++++ ++VG + +P + + Sbjct: 186 NVKKFIEVVHKSTSPVFMSEDKFRIPRIISNIKIDNKVVGYLAALECNKPFSENDMELVF 245 Query: 109 CMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTE-WAQRLGIDLNQPRVVA 167 + + E R + E +++L+ E+ + + L + V Sbjct: 246 TLCKVIASEMQRSRFIENTKGSRYEHFIIHLLSGEKIDKMTIDGRLKFLDLHFKHNLYVM 305 Query: 168 IVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 ++ V ++ L + +I+ +VV+ N D Sbjct: 306 VLNVPQNNFVNIPLNQIRDRIDYMLVDSK-----SIIYKDTIVVIINCNNKISPTD---- 356 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 K +L+ +++ + V L F + Y A + +G + Y+ Sbjct: 357 -KTFSKLLDFIQKN---KIFVGLSRCFHNLTDMKSYYEQALKAIELGITLKTNEFFFLYE 412 Query: 288 DLMLPVLLDSLRGD-WQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKAL 344 D + LL N + L D+ N ++L + + L T+ L Sbjct: 413 DFTIHHLLQLCSSQGNLKNFCLSSIFSLIKYDHTNNTDYMKSLYTYLLNGKNQLETADVL 472 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 + R+TL +R+ +I ++ ++L + L + + + Sbjct: 473 KVCRSTLAHRIEKIQQIMDINLNDSITSFKLILTFIILD 511 >UniRef50_UPI0001C32213 transcriptional regulator, CdaR n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32213 Length = 403 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 24/393 (6%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSG------DRERIGELHEGALLVLSQGRVVDIDD 65 Q +V + + V D + D R + A + + Sbjct: 5 QALVDALAGDLARPVGVDDRHFHALAYSAHEQEVDPVRRESILRRAAPAAVTEWLASLRI 64 Query: 66 AV--------ARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE 117 A G+ + LPLR +G ++G + L EP+ L L Sbjct: 65 DEQPGHARVPANADLGMAARVCLPLRFDGLLLGYLWLIDEPQPLDAAALAASRRCAAALA 124 Query: 118 QSRLM--HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 L + LV +L+ + + V + + Sbjct: 125 AVLAHARRLEDDEREREARLVRDLLLETGDVEEAAARLGTGAFARARGYVAIVATAEGST 184 Query: 176 LGVDSAMAELQQLQNA----LTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + A +L+ A + R+ L A+ + L + A Sbjct: 185 VADGPAATDLRLALAADQLRRSVAPRHALAAVGGGEAYLALAFDDPDDPQRRASALLDAA 244 Query: 232 EQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 + ++ + V++G + S A+ + V + + + L Sbjct: 245 RE---QLPDARDGTVLVAVGGVRATVAQLRASCTEARHALRVAQAVPETAAPARWDALGA 301 Query: 292 PVLLDSLRGDWQ-ANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNT 350 + L GD + L L RL + L TL A+ H A + ALF+HR++ Sbjct: 302 YRTVAELVGDREPLGMLPSALVRLLDERDGETLLATLEAYLEHGCDAQAAAGALFLHRSS 361 Query: 351 LEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 L RL+RI ++ G DL DDRL L++ ++L Sbjct: 362 LYNRLHRIEQIIGRDLRRGDDRLELHLGVRLWR 394 >UniRef50_Q97J60 Possible transcriptional regulator from leucine-rich protein (LRPR) family n=1 Tax=Clostridium acetobutylicum RepID=Q97J60_CLOAB Length = 397 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 101/263 (38%), Gaps = 12/263 (4%) Query: 128 DSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD---SAMA 183 + E + ++I + + + A G + + +VE+ + + ++ Sbjct: 132 NQESMENFMKDIIFRDFTFSEDILSRAVAYGYNPKTKYISFVVELHNEKDMLECDLKTKQ 191 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 ++Q+ + + I+ ++++ P + R +E++I++ K Sbjct: 192 YIEQIVIEVLGEWNKRSIHIMQYNSIILMLP--KNEKRTIKNIAMNIIEEIISKAKN--- 246 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DW 302 + +G F+ S A + V K + Y +L + L + + Sbjct: 247 TSVNIGVGGEFSELRDFKISVSEAHRCLKVLKLNNDNNTVISYDELGIYKLFFQMDNLEE 306 Query: 303 QANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 L +L D N L TL + + + T++ LFIHRNTL+YR+ RI E Sbjct: 307 MKKFYLDVLKKLIDYDSKNTTELMNTLEMYIKESTNINRTAEKLFIHRNTLKYRIRRIEE 366 Query: 361 LTGLDLGNFDDRLLLYVALQLDE 383 +T L + + AL++ + Sbjct: 367 ITKCSLKDVNVLFNFDTALKIKK 389 >UniRef50_Q5WAP5 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAP5_BACSK Length = 536 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 61/381 (16%), Positives = 125/381 (32%), Gaps = 16/381 (4%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQ--GRVVDIDDAVARH 70 +V + +++ +++ + +I S D E + + + Sbjct: 151 SVVVQLASMLNVPALLLNDQLDMIASSDPVTNDSFFEKYWRLRELIPSKQLPTLQLSILQ 210 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLR-KYGELVCMTA-EMMLEQSRLMHLLAQD 128 P+R G + + G + + A + E +L Q Sbjct: 211 EENENPCAVFPIRTACARKGYLIVLGSASKSDCPFALAIEQAANVLSFELMKLHAAEQQA 270 Query: 129 SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGV--DSAMAELQ 186 + +L++ E + +N+ V +D+ + + A+ + + Sbjct: 271 RLAQNSFFSDLVEGRRPFE--MEHDESYPFSVNKDYVFIAAHLDNTSELLTNEEALEQHE 328 Query: 187 QLQNALTTPERNNL---VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L + L R VV+ + S V+ + ++ + Sbjct: 329 DLYSLLVRLFRERYPTSHVFWKNDVYVVVIESDRSSNEEA--KLLAEVDTVQQDIQALFR 386 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQ 303 + + F A Y+ A + G + +S ++ L +L + + Sbjct: 387 SGVSFGISS-FGSLSEAASLYKEATAALQSGYREHLQSFIKTHRAQELADMLQLIPSEKL 445 Query: 304 ANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 L L + L RTL+ + HN Q T+K + IHRNT+ YR+ + EL Sbjct: 446 TAFCQTALQTLATPESPDQAELARTLSIYINHNCQVAETAKVMAIHRNTVIYRIKKCEEL 505 Query: 362 TGLDLGNFDDRLLLYVALQLD 382 G DL D+ L L +A + Sbjct: 506 LGCDLKKPDETLRLRIAFLIR 526 >UniRef50_UPI0001B4EB53 CdaR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4EB53 Length = 402 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 84/394 (21%), Positives = 135/394 (34%), Gaps = 25/394 (6%) Query: 12 QDIVARTMRIIDTNINVMDARGRII-GS---GDRERIGEL--------HEGALLVLSQGR 59 QD+V I ++ V D R I+ S GD +R+ A +L+QG Sbjct: 7 QDVVDDLAERIGRSVAVNDPRVHILCASRHFGDEDRVRVRAVLQRDAGSAAAGHILAQGV 66 Query: 60 VVDIDDAVARHLH--GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE 117 V G+R + P+R ++G++ + +L A L Sbjct: 67 DRWTAPGVIPPRADLGMRARLCAPIRWRHHLLGLLVVIDPDGDLPTSSIDAVTAATHTLA 126 Query: 118 --QSRLMHLLAQDSRLREELVMNLIQAEENTPAL-TEWAQRLGIDLNQPRVVAIVEVDSG 174 + + RE + L+ + + + R G + V + Sbjct: 127 PLMYQDFAAGDTERTAREGALRQLLDSSDTVRETGRDALARGGWLPSSRYATVTVATVAA 186 Query: 175 QLGVDSAMAELQQLQNALTTPERNNL----VAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 D A L+ L + ++ +++ Sbjct: 187 DSPADHGGAAEVALRTGLERVAADRSWRTEFCLIGPHGVLLTFSDRPLPDESLGARASAL 246 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIA-RSYRTAKTTMVVGKQRMPESRCYFYQDL 289 +EQ + + G + +G G A SY A R ++ L Sbjct: 247 LEQARSVLA--GTAQCVAGIGETADGGAEAAWMSYEQATGAARTAGVRPGGDDIVHWEQL 304 Query: 290 MLPVLLDSLRGDWQA-NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHR 348 L L D L PL L D +G L TL A+ H T+ AL +HR Sbjct: 305 GALAPLSLLPPDRLTPALLPGPLRTLLAQDPSGRLTETLTAYLDHAGSAPRTAHALHLHR 364 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +L YRL RI+ELTGLDL + D+RL L++ L+L Sbjct: 365 TSLYYRLQRITELTGLDLADGDNRLTLHLGLRLH 398 >UniRef50_C6PB06 Transcriptional regulator, CdaR n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PB06_CLOTS Length = 349 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 76/369 (20%), Positives = 146/369 (39%), Gaps = 37/369 (10%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARH 70 + +V + + I ++D G++I SGD L +G + + R Sbjct: 7 IRKVVKDYQKYVTEPIFLIDKDGKLIYSGDES----------LSKKEGIFAVNREFIERR 56 Query: 71 LHGVRQGIN-LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 QG+ + + G +G+ G + + L+ M+ E + Q Sbjct: 57 DVYEWQGMTFYNIFVSGWRFLTVGIRGTGDKAKNMVMLLSMSFEHLSNQV---------- 106 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 +E+ ++ L+ + + + + ++ + V I+E ++ Sbjct: 107 -SKEDFLLKLLIGDLDRDEIEYYIEKYKFEEKDLYRVIIIESHDAIDDA-------FKIV 158 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 + V + S V+L ++++ D K + L ++ ++ + Sbjct: 159 GHIFEKNSYQTVILSSNKFAVLLLESVSA-------DIDKATKTLKDTIESEVYIKIDIG 211 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQR-MPESRCYFYQDLMLPVLLDSLRGDWQANELA 308 + N I++ YR A + +GK+ E YFY+ L LL L D L Sbjct: 212 VSNKAYNFTDISKGYREASIALKLGKKIDNNERGIYFYRSYALEELLLELPEDVIKRFLE 271 Query: 309 RPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGN 368 N+ L TL ++FR+++ TS+ L+IHRNTL YRL++I +LTG D Sbjct: 272 ALTDGELDYFNDDELVSTLNSFFRNSLNLSETSRDLYIHRNTLVYRLDKIHKLTGFDPKQ 331 Query: 369 FDDRLLLYV 377 F+D ++L V Sbjct: 332 FNDAVMLKV 340 >UniRef50_B0MH14 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH14_9FIRM Length = 237 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 9/236 (3%) Query: 148 ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLT 207 + A++L ID+ RV ++E G+ L + L ++ +A V Sbjct: 2 DIYNRAKKLNIDIEATRVAYLIEATYGKD------QNLVETVKQLEDTTDDDFIAAVDEK 55 Query: 208 EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 +V++K + ++ K E+L+ +K G R+++G G ++RSY+ A Sbjct: 56 SIVLVKEVC---VKAQSKQFVKTAEKLLKNLKNVGINDARIAVGTIAKGIKDVSRSYKEA 112 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTL 327 + + V K Y L + L+ L + + + T+ Sbjct: 113 QIALEVDKIFYENKEVVAYDQLGIGRLIYQLPLPLCKMFIKEVFGDYSPEEIDDETLATI 172 Query: 328 AAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +F +N+ TS+ L+IHRNTL YRL++I + T LDL NF+D + +AL + + Sbjct: 173 YKFFENNLNVSETSRQLYIHRNTLVYRLDKIQKSTNLDLRNFEDAIAFKIALMVVQ 228 >UniRef50_Q0B7J6 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q0B7J6_BURCM Length = 602 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 138/385 (35%), Gaps = 25/385 (6%) Query: 18 TMRIIDTNINVMDARG-RIIGSGDRERIGELHEGALLVL---SQGRVVDIDDAVARHLHG 73 ++D+ + V+D G ++ S + L A L GR + A H Sbjct: 207 LADLLDSPVLVIDFYGGELLASRPP--VEGLDAAAWRALLDGETGRQMRETVREAIARHA 264 Query: 74 VRQ-------GINL-----PLRLEGEIVGVIGLTGEPENLRKYGELVCMT-AEMMLEQSR 120 R+ G+ L PL ++G+ VG + GE + M ++ R Sbjct: 265 SRRVGFVLPGGVPLTADVEPLAVDGDTVGALLSFGERAEGDLQALAIESAKFAMSVQLMR 324 Query: 121 LMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 + ++R EL +++ + + E ++RLGI L P + +V+ + Sbjct: 325 SVIRFRAETRTLTELFFEIVERRWRDEQDIVERSRRLGIALGTPMRLLVVDYPHREGPAL 384 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 AE + + + + +V L P + QL + Sbjct: 385 DRSAECHRTVGLIAAQHKLISHPVTVGGGLVCLLPEDDQRPLASVN---AFARQLCGALT 441 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR 299 + + + G +A + + V + LP+L+ + Sbjct: 442 PLFGGEPTLVVSDCVAGLTELANEWDRCWRMIRVARSFGKTGALSVPDLGPLPMLMGAAD 501 Query: 300 GDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNR 357 + + + D + TLA + RH + A + A+ +H TL YRL+R Sbjct: 502 SPDVRAFITGTIGPIVEYDASHRASYLDTLAVYIRHGCRSQACADAMGLHVTTLRYRLSR 561 Query: 358 ISELTGLDLGNFDDRLLLYVALQLD 382 IS+L G+D+ + R + +ALQL Sbjct: 562 ISDLFGIDVETPERRFAVELALQLH 586 >UniRef50_D1BKQ6 Sugar diacid utilization regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKQ6_SANKS Length = 360 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 136/379 (35%), Gaps = 36/379 (9%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65 L +++AQ +V ++ ++NVMD G II S D ER+G LH GA V+++G V + Sbjct: 9 LSSELAQRVVDTVTSRLERHVNVMDEHGVIIASSDPERVGTLHHGAARVVAEGHTVTVTT 68 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 R G+N PL ++G + GV+G+TG+P + + +V + ++++ Q R Sbjct: 69 PEPG--SSDRPGVNEPLVIDGRLCGVVGVTGDPREVAQLATVVALGVQLLITQERSYDAA 126 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + S EL+ L + + + G+ P + + G S + Sbjct: 127 TRRSTAARELIAFLTSGPPDATEVGSRLRSAGLG-TGPWNLGVWAHPEAPRGGSSVPPD- 184 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + V+ L R + L Sbjct: 185 -------GAAHLAASLNSRENHRAAVMHGLLWILDRSPRQAVVAGARGL----------- 226 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTM-VVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQA 304 S+ +A + + + + D +L Sbjct: 227 ---SVTQVAAPDQLLAHALD--LRALSRYPRLLPVGGQVV--DDGAALLLGLGHLPPASL 279 Query: 305 NELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 A +ARL D +L T + S ALF+HRNTL +R+ RI +LT L Sbjct: 280 ARRAATVARLSASDAETVLALTRST------TLAEASAALFVHRNTLLHRVQRIRDLTSL 333 Query: 365 DLGNFDDRLLLYVALQLDE 383 D D L+ L E Sbjct: 334 DPRVPGDLAALHTGLLARE 352 >UniRef50_A1SGR6 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SGR6_NOCSJ Length = 438 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 76/398 (19%), Positives = 136/398 (34%), Gaps = 28/398 (7%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 I A R+++ + GR S E + + LV GR+ A Sbjct: 38 IAAEVARVLEVGVAFTSTDGRERASALPEDLRSALDSHDLVDPTGRLRVERMAGDGAPVE 97 Query: 74 VRQGINLPLRLEGEIVGVIGLTGEPENL--RKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 + +L + G + + E L L A L +R + A +++ Sbjct: 98 TGEARSLRVAAGGVDLARLVCLRPDEPLSSDDVHALERAAAVAALLITREEAVTAVENKY 157 Query: 132 REELVMNLIQAEE----NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187 + + + +L+ + +TE A G DL +P VV E+D + +Q Sbjct: 158 QGDFLRDLLMRRGGLANDQAYVTEHAATFGWDLARPVVVVSAEIDPVPGEEPVGGVQRRQ 217 Query: 188 LQNALTTPERN-------NLVAIVSLTEMVVLKPALNSFGRWDA-----------EDHRK 229 Q + R + + +E+V L P D D + Sbjct: 218 WQERFSAAWRQVSNGLGTGIPCVDFSSEVVTLLPLAGYGPEDDPGDRREDEPVAGHDVVR 277 Query: 230 RVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDL 289 R + K G+ F V + + +Y A+ + VG++ F+ L Sbjct: 278 RAVTAVAGDKGGGRRSFSVGVSRVARTLDELPGAYAQARRAVEVGRRVSGWGSTTFFDQL 337 Query: 290 MLPVLLDSLRGDW---QANELARPLARLKT-MDNNGLLRRTLAAWFRHNVQPLATSKALF 345 L L+ + + + + L L LR TL N ++ F Sbjct: 338 GLHRLIALIPPEENGELRSFVRDVLGPLAEPTSEAADLRETLQVLLDTNFNVAEAARLQF 397 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 H NT+ YR++++ L G + RL + VAL++ E Sbjct: 398 FHYNTMRYRVSKLERLLGPLSTDPHLRLDVAVALRVLE 435 >UniRef50_A1R5V9 Putative uncharacterized protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5V9_ARTAT Length = 537 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 77/378 (20%), Positives = 137/378 (36%), Gaps = 27/378 (7%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALL-VLSQGRVVDIDDAVARHLH 72 + R+ I + DA G+I IG L ++ R + + + Sbjct: 172 LAKVLSRLTGRPIYIEDAFGKI---SAEAGIGSTPPYPRLPAAARLRTAQLWISSGLPVS 228 Query: 73 GVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLE--QSRLMHLLAQDSR 130 R+ + L L GE++G + + + A +LE S L + + Sbjct: 229 EHRRLVALAL-SHGEVLGAVCMLETDLPVTAANVFALKYAARLLEAELSHRRALALLELK 287 Query: 131 LREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 L +LV L+ E A LG D++ P+ V + + + + L+ Sbjct: 288 LGRDLVDELVSGMEAATA-VVRTAALGYDISGPQHVVVAVWEPPRTDD----TVVDALRR 342 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSL 250 + LV+ S + V++ + + ++ V + Sbjct: 343 TFQKLHCSALVSGRSDMAVAVVRGDPLGAEVYSV---------VAKTLRSATG---SVGI 390 Query: 251 GNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL-RGDWQANELAR 309 G I RS+ A + + + + L + +LD+ L Sbjct: 391 GGSSLDVEQIPRSFSEALHALHIRTASIDCYGATRFDQLGIYRILDTAGNVPDLVGYLDE 450 Query: 310 PLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 L L+ D L +TLA + H T+++L IHR+TL YRLN I ++TG DL Sbjct: 451 WLGDLQRSDESRGSDLVQTLAQYLDHGGNYDKTAESLAIHRSTLRYRLNSIRQITGFDLA 510 Query: 368 NFDDRLLLYVALQLDEER 385 + + RL L+VA + R Sbjct: 511 HPETRLNLHVATRAWRLR 528 >UniRef50_B8FU02 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FU02_DESHD Length = 404 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 129/312 (41%), Gaps = 13/312 (4%) Query: 78 INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT--AEMMLEQSRLMHLLAQDSRLREEL 135 P+ + + G + + E ENL + + +++E + L LR+ Sbjct: 89 YCWPI-VNQKKEGYLWILTEKENLSAEEMEITEYLRSALLVEIVKKQEQLKLKQYLRDGS 147 Query: 136 VMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTP 195 ++NL+ + L Q G +L +V I+E + G ++E++ Sbjct: 148 ILNLLFNNSD--QLETMGQVWGRNLLITHIVMILEGQTKVPG--HGLSEVRTKAENFIEA 203 Query: 196 ERNNLVAIVSLTEMVVLKPALNSFGRWD---AEDHRKRVEQLITRMKEYGQ-LRFRVSLG 251 + V + +VVL P D ++ + + + ++E ++ S+G Sbjct: 204 KYPGTVTGMIGKHLVVLFPYEKKTKEKDGHTNDNWKNIPRKAYSELQEILDDVKLWASVG 263 Query: 252 NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPL 311 + + + RSY+ AK + +GK + + F+ +L L + R + L Sbjct: 264 SIYPDQPLLYRSYQEAKVALEMGKVLGKKEKLTFFNELGAIRLFYNQRKQDLRDFFEETL 323 Query: 312 ARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 + D N+G L TL ++ A +K +FIH NTL YRL ++ ELT L + Sbjct: 324 GPVLKYDRTNDGNLLLTLWHYYASGGDISAATKGMFIHANTLRYRLRKVEELTASSLDDQ 383 Query: 370 DDRLLLYVALQL 381 + R +Y AL++ Sbjct: 384 EVRFNIYAALKV 395 >UniRef50_D2AXV2 Putative transcriptional regulator, PucR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXV2_STRRD Length = 514 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 78/380 (20%), Positives = 134/380 (35%), Gaps = 13/380 (3%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 D +V +D V+ A GR + G A LS + Sbjct: 144 DGGSLSKVVTAVAGELDVPCWVVSATGRAVVGSQPLPEGAGERLAHAFLSARFLPGTAVR 203 Query: 67 VARHLHGVRQ-GINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + V P R+ + G +V + A + LE+SRL Sbjct: 204 ADGTVLSVFPVSKGAPHRIANWFLAYAG-EQVRAGGEHEDLIVELAALVALERSRLEAAQ 262 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 + R+ ++L+ L + N P + L I+ + + V+ + +A L Sbjct: 263 RIERRVLDQLLGLLTSGDANLPGVVSRLHTLHIETEDGLLAVALAVEGTDRADEVGVAVL 322 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 +L L VA E V L P + L + G R Sbjct: 323 DELLRPLAPG-----VATAVGGEAVALVPLAGNSAAELTSHMLAGAATLEAGL---GDAR 374 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPV-LLDSLRGDWQA 304 + + + TGP +++ A+ + + D+ L+ ++ G+ + Sbjct: 375 ITIGVSSVTTGPAALSSLIEEARHARTLAELGEGRVSAITGDDVSSHRSLIAAIPGELRR 434 Query: 305 NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELT 362 + R L RL+ D + L TL + + AT+ L +H NTL YR+ RI ELT Sbjct: 435 SFRTRLLGRLEEYDAAHQTELVETLETFLEESGSWAATADRLHVHVNTLRYRVKRIEELT 494 Query: 363 GLDLGNFDDRLLLYVALQLD 382 G L D+R+ +AL++ Sbjct: 495 GRSLNALDERVDFLLALRMR 514 >UniRef50_C0XJA2 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C0XJA2_LACHI Length = 539 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 132/396 (33%), Gaps = 25/396 (6%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINV---MDARGRIIGSGDRERIGELHEGALLVLSQG 58 + IV ++ + D I S H+ + +Q Sbjct: 146 IQLAIQNSSFNAIVNLLSSLVSNPTFIFKIEDN----IASNIIHNDQNTHKLKEIDFTQR 201 Query: 59 RVVDIDDAVARHLHGV----RQGINLPLRL-EGEIVGVIGLTGEPENLRKYGELVCMTAE 113 R V + + V + L +++ + + +G+ E + L+ + A Sbjct: 202 RPVPKKEYTNYQYYEVTLTDKSFKLLMVKIPQSQDQLYLGVLQENQILQDVDFMAIENAV 261 Query: 114 MMLEQSRLMHLLAQD--SRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVE 170 + L +++ +LI + + + + V +++ Sbjct: 262 NFTQMEVLKQTALNQGLRTYANDIIDDLINGKIASEEEFQATLKHFNLVETSNYRVTVLQ 321 Query: 171 -VDSGQLGVDSAMAELQQLQNALTTP--ERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH 227 + ++ D ++ ++ N V + ++++ ++ Sbjct: 322 ALKEEKVQPDYYRDNPREADRVVSQFKLYWPNTVYRIRQNRIILIISEDQQSPEKMQDNL 381 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 +K ++ L + L F++ L P A T+ + ++ + Y Sbjct: 382 KKILQTLEDT---HPNLNFQIGLSETCH-PKDFKVYASQALKTLQIASHLNKRNQIFNYN 437 Query: 288 DLMLPVLLDSLRGDWQAN-ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFI 346 DL L + + + L ++ + L TL + HN A++ ALFI Sbjct: 438 DLGFYRFLFQVDNPEKLRSFVPEDLLKI--YKDKPELYTTLKTYLEHNQNAKASANALFI 495 Query: 347 HRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 H T+ YRLN+I E T ++ + D+ L V +++ Sbjct: 496 HPKTMSYRLNKIQERTSINFSDVDEVFRLNVGIRVL 531 >UniRef50_C1B780 Putative CdaR family transcriptional regulator n=3 Tax=Rhodococcus RepID=C1B780_RHOOB Length = 550 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 74/386 (19%), Positives = 138/386 (35%), Gaps = 18/386 (4%) Query: 13 DIVARTMRIIDTNINVMDARGRIIG-SGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 ++ + + + GR + +GD + L A L + D + Sbjct: 166 ELAVAVAGDLGGAVLITTPDGRQLCRAGDESELRRLASSAALDSTGRVRTDSTEGGLGLH 225 Query: 72 HGVRQGINL-PLRLEGEIVGVIG--LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 + I + + G G + TG+ + + A L +R + + + + Sbjct: 226 RLGDESIAVSAISANGIDHGRLVHFRTGDLLHSEDLYLVEQAAAVCALVVARELVVSSVE 285 Query: 129 SRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAE 184 + R V +L+ + A+ G DL++P VV ++E D + + + M Sbjct: 286 EKHRANFVRDLLLGRGGEHEHVVAHAKTFGWDLDRPVVVVVIEPDPVGEDEPSMPTRMPL 345 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 +++ A T+ VA V P D V +L+ ++ G Sbjct: 346 VERQARAFTSA-----VAGRDAGAAVTALPTETVILMGVGTDTMNLVHELVATVRGAGGG 400 Query: 245 RFRVS---LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 R + I Y A+T + VG+Q + DL + LL + D Sbjct: 401 GRRAFGVGVSRPTDSVDGIPALYGQARTALKVGRQITGAWAVTHFDDLGVYRLLSLVEDD 460 Query: 302 WQAN-ELARPLARL-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + L L +RRTL N+ T++ L H NTL YR+ ++ Sbjct: 461 RELESFAQETLRELTADTPEAQDMRRTLEVLLATNINIAETARQLHFHYNTLRYRVVKLE 520 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEER 385 ++ G + + RL L +AL++ R Sbjct: 521 KMLGSFTDHPELRLDLSLALKIMAMR 546 >UniRef50_B8FTD6 Transcriptional regulator, CdaR n=3 Tax=Desulfitobacterium hafniense RepID=B8FTD6_DESHD Length = 409 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 129/380 (33%), Gaps = 16/380 (4%) Query: 17 RTMRIIDTNINVMDARGRIIGSGD--RERIGELHEGALLVLSQGRVVDIDDAVARHLHGV 74 +++ I V + I + + E +S ++ Sbjct: 28 TLSKLLKLPIIVANTAYETIATTHLHPDLDSFQVENDEQGVSHKKLYFCTIKTDTL---G 84 Query: 75 RQGINLPLRLEGEIVGVIGLTGEPENLRKYG----ELVCMTAEMMLEQSRLMHLLAQDSR 130 +G+ + G ++G + L + L + + + L + ++ Sbjct: 85 LRGLGRAIAPAGRVLGYLFLVTDKAEGSDLDFYETLLDNVESLYANSLKNQLELKQKKNK 144 Query: 131 LREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM---AELQ 186 ++ +L+ + + + G D P V +++V +L A + Sbjct: 145 SKDAFFYDLLYGNLKRNEDIMNRGEVWGWDFRHPHAVLLLKVRDVELFSPDRHLIDALQR 204 Query: 187 QLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI-TRMKEYGQLR 245 ++ L N V E++ L + + +D + ++ R Sbjct: 205 IVERGLINRYGKNPAVTVHRNEVIALVHSASRKRSEQKQDIKALAGNILNQTADTELNKR 264 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 +G + P + RSY+ AK + +G + F+ D+ L +L Sbjct: 265 IAFGVGQTYDEPIDLFRSYQEAKVVIDMGGLLGVK--VPFFSDMGLERVLYKHDIQDLKE 322 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 + L L+ ++ L L + + T++ LFIHRNTL RL++I + Sbjct: 323 YRDQVLGDLRKDESGESLLEILKTFTMNQFDVNKTAQDLFIHRNTLRTRLSKIEAILDRP 382 Query: 366 LGNFDDRLLLYVALQLDEER 385 L + RL L L++++ Sbjct: 383 LDDMSTRLDLTAVLKIEQLH 402 >UniRef50_C8X9X0 Transcriptional regulator, CdaR n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X9X0_NAKMY Length = 616 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 138/401 (34%), Gaps = 42/401 (10%) Query: 14 IVARTMRIIDTNINVMDARGRI--IGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHL 71 IV +I + + DA G++ + G EL L + G V VA Sbjct: 216 IVHALAELIGQPVVIEDADGQVSAVAGGAA----ELPPPELRAAASGDAVADGAEVAGRH 271 Query: 72 HGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL 131 + + G++ + + + + + + LE +R+ + + RL Sbjct: 272 VWT-------VWVAGDVAARLWVGPGHLSALDRRAVEHGSLVLSLELARIRTAVEVELRL 324 Query: 132 REELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL-QQLQ 189 R EL+ +++ ++PA+ + A RLG DL+ P VV + V+ + + Sbjct: 325 RGELLTDVLGGAAADSPAVRDRAARLGHDLSGPAVVVVGRVEPADPARRILLEQRVLAAA 384 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 L + + VL PA + D T G+L R+ Sbjct: 385 ADLAARFHPRPLVGTYRGVLAVLWPAALTDPVPDPARGTGSGPGPGTGAGAGGRLDARIG 444 Query: 250 LGN------------------------YFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 G ++R A+ + +G Sbjct: 445 AGTGGRVGEAVRRALRSVPGVAAATVCVSPPAADYPLAFRMARGGLEIGLAGGRIDTAIT 504 Query: 286 YQDLMLPVLLDSLRGD-WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 DL + LL + R LA ++ D L TL + AT++ Sbjct: 505 LDDLGVAGLLLQVDDPGPLVAFADRTLAPVRRHDAQRGTQLLDTLRCYLAARQNRAATAQ 564 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 AL +H NT+ RL R+ LTGL+L + + + + AL + + Sbjct: 565 ALHLHPNTVTQRLQRVESLTGLELADPEAMVQVRAALTVLD 605 >UniRef50_C3JVB9 DNA-binding protein n=2 Tax=Rhodococcus erythropolis RepID=C3JVB9_RHOER Length = 539 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 76/398 (19%), Positives = 134/398 (33%), Gaps = 39/398 (9%) Query: 15 VARTMRIIDTNINVMDARGRIIGSG------DRERIGELHE---------------GALL 53 ++D I + D R+I D RI + E Sbjct: 148 ANAVSALLDAPITIEDRSSRVIAFSGRQEEGDGPRIATVLERQVPDQYIRVLEEAGVFDR 207 Query: 54 VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTA 112 + V + G I + +R E +G + + TGEP + + L Sbjct: 208 LYRSDDPVWVSAETLGTKMG---RIAVSIRAGDEFLGSMWVATGEPMSDDRMRALRDSAG 264 Query: 113 EMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAI---- 168 + L+ RL + RLR +L+ L+ LG+ V+A+ Sbjct: 265 LIALQMLRLRGGADAERRLRADLIATLLDGGSGAVDAMNR---LGLGTGPALVMALGRRS 321 Query: 169 VEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHR 228 E S + L L + A+V+ T VL +S + + R Sbjct: 322 FEGSSKPDDAAHVVRLTDALAMHLGAVHSQSAAALVNGTGYAVLSVRGHSPAEAELQAFR 381 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 + R G + +G T P ++RS R A+ + V + Sbjct: 382 -VASDFLDRTGASGDT--IIGIGRVVTRPAQLSRSKRDAEHALEVLLAGRASGSVATFSS 438 Query: 289 LMLPVLLDSLRGDWQANELAR--PLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 + + +L + + A + P+ + + D + TL AW + +L Sbjct: 439 VHVDAILLEIASEAAAEGFSDLGPIEAIASHDAAHATSFVDTLDAWLNAFGDVGDAAASL 498 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +H NT YRL+++ + LDL + + R L V L+L Sbjct: 499 HVHPNTFRYRLSKLKGMAALDLDDPNVRFRLMVHLRLR 536 >UniRef50_Q46PC8 Transcriptional regulator, CdaR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PC8_RALEJ Length = 494 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 84/389 (21%), Positives = 152/389 (39%), Gaps = 39/389 (10%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRER----IGELHEGALLVLSQGRVVDIDDA-- 66 D+ ++++ +N +D G ++GS D R +GE +L+ ++ Sbjct: 122 DLARALGKLLNRAVNFVDTDGLLLGSSDETRAERELGERERAYFRLLNNRIILRQIQDSM 181 Query: 67 -----VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM--MLEQS 119 A GV + + P+R+ G I I + G L + A + L Sbjct: 182 SPLLLDAIPEVGVPKRLGCPVRIRGAIAAFIFVDGGDMPLGELDIRATEHASIIAALHLV 241 Query: 120 RLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSG---- 174 + L Q+ RL LV +L++ + E TP E A+ G D + V +V +D Sbjct: 242 HMRALHLQEERLGYALVGSLLEGKFEETPTALERARLSGWDPSGNYRVCLVLLDEPLPLS 301 Query: 175 QLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL 234 + G +++L+ L + L+ +VSL ++ L A G Sbjct: 302 KEGFLRRERWVERLRRYLENSGQPPLI-LVSLNQITFLMAADVEPGPL------------ 348 Query: 235 ITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 K G +++ G +A+ + ++ + + + + + +Q++M P Sbjct: 349 ---WKSLGSRGAALAVSRVHRGITGMAQGGQDVQSLVPLLR----PGKVHHFQEVMFPRA 401 Query: 295 LDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 L D +A + + L L TL A Q T++ L +H +TL YR Sbjct: 402 LMG-DADARALFIQSKIGPLLNDKKGEALLETLEALCAEGFQLANTARRLGVHISTLRYR 460 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQLDE 383 L RI L G L + +R L VA+ L + Sbjct: 461 LERIESLLGSALEDQANRFELQVAVALHK 489 >UniRef50_C3JW82 Transcriptional regulator n=3 Tax=Rhodococcus RepID=C3JW82_RHOER Length = 565 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 137/386 (35%), Gaps = 19/386 (4%) Query: 13 DIVARTMRIIDTNINVMDARGRIIG-SGDRERIGEL--HEGALLVLSQGRVVDIDDAVAR 69 I A + D ++ + GR++ +GD + L E L++ V + +A Sbjct: 183 QIAAEFAALFDVSVLICSPDGRVLTEAGDSAALNALPLFESTGRFLTERVAVGLQNAPKG 242 Query: 70 -HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD 128 + G +V G + L L ++ + + A + Sbjct: 243 FPGQLALTRVVAGGTDHGRMVAYAGTHELGAVV--VQALERAATVAALAVTKQLAVAAVE 300 Query: 129 SRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQ 187 S+ R + + + + E +P ++ +LG D+ +P V + E+D A + Sbjct: 301 SKFRGDFLRDALIGEAGSPAEVSAHFTQLGWDVTRPLAVVVAELDVDHPESQHANSTRTD 360 Query: 188 LQNA------LTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEY 241 + ++ E+V L P D E ++V + Sbjct: 361 QDRLSDGWQQVVRTHERTAPSVGFRHEVVTLFPTSTDRAVRDIEGLVRKVAG----DRTS 416 Query: 242 GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD 301 G+ F + + +Y A T +VVG++ + + +L + LL Sbjct: 417 GRRSFSTGVSRVIYSLADLPAAYDQACTAVVVGRRINGPGQIAHFDELGVHRLLSLQTDK 476 Query: 302 WQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + + + + DN LR TL N S+AL +H NTL YR+ ++ Sbjct: 477 SELRSFTDDVLKSLSADNAEAADLRLTLQTLLDCNCNVAEASRALHMHYNTLRYRIGKLE 536 Query: 360 ELTGLDLGNFDDRLLLYVALQLDEER 385 + G + RL + +ALQ+ + Sbjct: 537 SVVGSFTDDPVLRLNVSLALQVMKMH 562 >UniRef50_C0CYS7 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYS7_9CLOT Length = 543 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 57/394 (14%), Positives = 133/394 (33%), Gaps = 25/394 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M L +++ + ++ +I ++D + + + G Sbjct: 153 MMEMLLSGAEVEELAEKLAELLQKDIVLLDNQ-----------LDSICAALRGEGETGWT 201 Query: 61 VDIDDAVARHLHGVRQGINL----PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML 116 + + R L G+R N P++ G I + + E ++ A ++ Sbjct: 202 IYRREEADRILKGLRLFENHYTMHPIKAGNNRFGFIFVP-DSEKSDDNLKMAIEQAALLF 260 Query: 117 EQSRLM--HLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDS 173 + ++ + +L+Q + + L + + L P+ V +++ + Sbjct: 261 ASVFFKNYAVTLNQRNFKDVFIRDLLQGKIRSEIELENKMRAFDVSLAFPQYVVAIKLFT 320 Query: 174 GQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQ 233 + QN ++ I + + E + Q Sbjct: 321 DNEVMRKHFYNELIDQNLISKRMAYFYQHIRKKNSVYFNDSIVVIENDQSEESVNEFYSQ 380 Query: 234 LITRMKEYGQLRFRVSLG--NYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLML 291 +I +++ ++ +G + YR A + VG +S Y L Sbjct: 381 VIGKLEAEAGENSKIGIGISREVKNFSELKTGYRQAVHAVRVGNILYRDSFISRYSKNGL 440 Query: 292 PVLLDSLRG-DWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHR 348 L++ + D + L + D N L +TL +++ S+A ++H Sbjct: 441 FELIEQINDTDLLVRFVRERLGAVIDYDRNNKASLMQTLEYLIQYHFNLKQVSEARYLHY 500 Query: 349 NTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 NT+ YR N++ +L G+DL + + +A ++ Sbjct: 501 NTVRYRANKLQQL-GVDLEPGEGLGEIILAYRIY 533 >UniRef50_C1BDR7 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BDR7_RHOOB Length = 654 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 137/402 (34%), Gaps = 28/402 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGR--IIGSGDRERIGELHE-----------GAL 52 L ++I R++ + D R ++ S + Sbjct: 221 LRGSSLREIGDTVARLLGKPCAIYDNAFRRRVL-SSPAQSAQNFTPKLLDKDIREAPAVR 279 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINL-PLRLEGEIVGVIGLTGEPENLRKYGELVCMT 111 L+Q + G+ + L + L+G+ G + + L E V Sbjct: 280 ESLAQLKPGTPTVIQPLPWLGLHHRLLLCAVMLDGDCWGYVVVAEHGRRLSPLDEAVVRR 339 Query: 112 AEMMLEQSR--LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV 169 A + + R E +L++ +E+ AL E A+ LG+ L+ PRVV +V Sbjct: 340 AALNIALERSGERRAGTVQWHTIEAFTGSLLRGDESLAALEERAEVLGLRLDVPRVVCLV 399 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG-RWDAEDHR 228 + + L + + ++A S ++ ++ S R + Sbjct: 400 AARQKDAPLQISPQMLA--KRLTDRESPSAVMAAPSGNDIALILELPESADHRRGVAWAK 457 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM--PESRCYFY 286 RV +T + V++ PG R++ A+ + + P ++ Sbjct: 458 DRVRAAVTGIASE--DALNVAISTVAYAPGEDTRAFNEARQVLSCMHHHLGIPGTQFLTV 515 Query: 287 QDLMLPVLLDSLRGD-WQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKA 343 +L LL S L L D+ L TL+ + ++ Sbjct: 516 DELGAGRLLLSSTDPTDALRYAHDALGPLLASDSAKTRELLTTLSVFLDAGWSVRRAARL 575 Query: 344 LFIHRNTLEYRLNRISELTGLDL-GNFDDRLLLYVALQLDEE 384 L +H NT+ YR RI +LTGLD+ + +L +AL + Sbjct: 576 LGVHANTIRYRTARIEQLTGLDVATDAHAQLTAQLALLILRM 617 >UniRef50_UPI0001972DEA carbohydrate diacid regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001972DEA Length = 391 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 67/378 (17%), Positives = 130/378 (34%), Gaps = 28/378 (7%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSG-DRERIGELHEGALLVLSQGRVVDIDD 65 Q + +I + ++ G + R E A + G Sbjct: 27 SNSTFQTTLEEIKKITGIELMLLRPGGGMTAFTCPPGREDT--ERAEQFAASG------- 77 Query: 66 AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125 + + + G+ V+ G + V + Q + Sbjct: 78 ---ADFQSFGELCLVKVADRGKTEFVLAGRGSGD--------VLTCLRLAALQISGLIRF 126 Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185 +D RE + ++ + + A+R +D R V ++E D + Sbjct: 127 QKDRFDRENFIKRVVLGHLLPVDVDDQAKRFRLDGRVSRTVFLIETREDGGDSDVIL--- 183 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 Q+ L + + + V ++ E+ + ++ + G Sbjct: 184 -QILRPLYGETAGGFLFKTAHRKYVYVRTMREGESTEGLEEIGRN---IVDVINTEGMQD 239 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305 +S G ++ SYR A M +G+ ES Y L + L+ SL Sbjct: 240 ACLSFGTPTKKLSGLSESYREACLAMRIGRIFSRESHVVAYDRLGMGRLIYSLPMPLCRK 299 Query: 306 ELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365 L A + + T+ +F ++ T++ L+IHRNTL YRL+++ +L GL+ Sbjct: 300 FLDEVFACAGPDELDEEALMTIRQFFDDSLNIAETARHLYIHRNTLVYRLDKLQKLLGLN 359 Query: 366 LGNFDDRLLLYVALQLDE 383 + NF+D +LL + L + E Sbjct: 360 IRNFEDAMLLRLGLMVHE 377 >UniRef50_C0ZBB0 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBB0_BREBN Length = 514 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 138/394 (35%), Gaps = 40/394 (10%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M L I + ++++DA G H G+ L + Sbjct: 144 MIDAALSKGGLPAIAGELAALTGGVVSLVDALG---------FEVTQH-GSSEALPLDQS 193 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 +I +P+R E G + LT ++ ++ A + Sbjct: 194 QEIAHR-------------VPIRANREHFGTLTLTKPEHAWKELDDVALQHASTLCALEY 240 Query: 121 --LMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 + A + RL+ + V L+ ++ T L + LG L + V V+ Sbjct: 241 VKERAVAATEWRLKGDFVEELLNGQQMTHTELESRCRMLGYPLTGHHLCVAVRVEVADQT 300 Query: 178 VDSAMAE-LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 + M + + L L+ + + + ++ + P D + + +EQL + Sbjct: 301 MLGDMHQSVITLMRRLSDRHQRSYLLRERPHCLLFILP--------DDQTSLRLLEQLTS 352 Query: 237 RMKE-YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 R + + +L +++L N ++ + A + + Y+D+ L Sbjct: 353 RWRGLHPELALQIALSNPCEQLPNVVSASEEALFALQAYPLLAQSPQILRYRDMQGYQFL 412 Query: 296 --DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 + L L D N L TL + N L TS+AL+IHR+TL Sbjct: 413 FPYHREKESLLRLWNPLLEPLIRYDTKYNQQLLETLEVYLAQNGNGLQTSQALYIHRHTL 472 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 +YRL +I E TG L + R L +AL + Sbjct: 473 KYRLTQIEEKTGYRLEDAHQRWQLQLALMARRLQ 506 >UniRef50_A1SPN8 Transcriptional regulator, CdaR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SPN8_NOCSJ Length = 552 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 81/394 (20%), Positives = 142/394 (36%), Gaps = 33/394 (8%) Query: 14 IVARTMRIIDTNINVMDARGRIIG-----------SGDRERIGELHEGALLVLSQGRVVD 62 + R R+ + ++ V+ RI+ S + ELHE L V Sbjct: 149 LCTRMSRLSNCSVAVIATDLRILAFDQGPNPWMHASMVAATVRELHERLLQEDVSAGPVT 208 Query: 63 IDDAVARHLHGVRQGINL--PLRLEGEIVGVIGLTGEPENLRKYGE------LVCMTAEM 114 ++ ++ G + + + + L G I + ++ + + + Sbjct: 209 LETSI-----GDNEVVCVVGAIELADHREGWIAVINADDSPHGHDLAEHRVVVEQAATIV 263 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDS 173 E RL + + R R V L+ + L A + V I Sbjct: 264 GTELLRLRSVERAEERARGNFVHALLHGRFSNHADLVARASHHDFAVEGRYGVVIARSAG 323 Query: 174 GQLGVDSAMAELQQLQNALTTP---ERNNLVAIVSLTEMVV--LKPALNSFGRWDAEDHR 228 D+ + + + AL +R L A+V VV + PA + A + R Sbjct: 324 LIAERDAPVRLAEMAREALRVAPVDDRQTLTAVVGDVLAVVRQVSPAGRTHPDPTAHELR 383 Query: 229 KRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQD 288 L R+ Q V+ G G I SYR A+ + +G++ E R + D Sbjct: 384 DYATGLERRLARLLQRPVHVAYGRPVKGAEQIVLSYREARIALDLGERLRME-RVCGFAD 442 Query: 289 LMLP-VLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIH 347 L + LL R + L L+ D +G L + +++ L IH Sbjct: 443 LRVDSALLGLAREPAGKSFFTDVLEPLRQ-DRSGTLLDVAREYVAAGGNVNESARRLGIH 501 Query: 348 RNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 RNT+ Y+L+RIS L D+ D + +++AL+L Sbjct: 502 RNTMLYKLDRISRLLERDIREADTQFTIWLALRL 535 >UniRef50_A8VR74 Transcriptional regulator, CdaR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VR74_9BACI Length = 547 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 145/411 (35%), Gaps = 37/411 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M ++ ++ +I++ I ++D ERI + + V + Sbjct: 144 MMEELVNGASLTELTMTVSEMIESPIILLDREL--------ERITDTTGKRVKVDRESVP 195 Query: 61 VDIDDAVARHLHGVRQGINL----------------PLRLEGEIVGVIGLTGEPENLRKY 104 + + V + L P+ E G + L + Sbjct: 196 PLPVERSFCLPNHVLDQVRLSVGSDGEIFLKDSFIQPVLAGEECFGYMILPTTDRQIDPN 255 Query: 105 GELVCMTAEMMLE--QSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLN 161 ++ +++ R L ++ + + +++ + + + E A+ DL Sbjct: 256 AKMALEQTSLLMASVFQRDKALKQKEENYLDAFIRDVLNEKMGSQFEVIEKAKLFKWDLQ 315 Query: 162 QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMV-----VLKPAL 216 P + + V + + + L +S +++ + Sbjct: 316 FPVALFNMSVRLEDVVKKRRILIQYMENRVVEQFLSRKLDIHISKIKLIYMDDSICAFIN 375 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK 275 +F E E+L+ ++ + + + + G G +++Y A T + + Sbjct: 376 VAFESGIDERLIGVCEELVAYLESHDPDAPLSIGIADTVEGLGRFSKAYHEAIRTRELSE 435 Query: 276 QRMPESR-CYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDN--NGLLRRTLAAWFR 332 + Y+D++L L+D + D +A+ + + + + D L +TL A+ Sbjct: 436 KIAEGGSFVRHYRDMVLYELIDQISEDVRADFIDKRIGAVLRYDETKKMELLKTLEAFID 495 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 H+ + +LFIH NT YRL ++ EL G+D + D + +A ++ + Sbjct: 496 HDFNAQKAAASLFIHYNTFRYRLEKLKEL-GVDYDSGFDWMETALACRMQK 545 >UniRef50_B8FRM6 Transcriptional regulator, CdaR n=2 Tax=Desulfitobacterium hafniense RepID=B8FRM6_DESHD Length = 404 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 75/390 (19%), Positives = 146/390 (37%), Gaps = 25/390 (6%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIG-SGDRERIGELHEGALLVLSQGRVVDID 64 L+ + +++ N+ + D +G I D+E++ + +L +G D Sbjct: 16 LEMNNLEHVLSYLRESTGRNVIISDYKGTIYNLGSDQEQLPQSFFSIILNWDEGSPYLWD 75 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGL----TGEPENLRKYGELVCMTAEMMLEQSR 120 + + + V E G I + + E L E + + + Sbjct: 76 EELLTLCYKVGT---------SEKDGFIFVEPAHSEECHELIPSLEKASLAVKTYFNLAH 126 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDSGQLGVD 179 M L ++ + +++ N L + + L DLN V I+ D ++ Sbjct: 127 SMEKL--NNVYTNNFIADILLCNINIKELLKQNSFLLNYDLNNLYYVCIMLTDRILTEIE 184 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK----RVEQLI 235 A L ++ L + + + +V + P D + K + + Sbjct: 185 KQ-ALLAYTRDWLKLNKLDIFCTVWDNKYLVHICPTHYDVKILDVDSGWKKSLDNITRYH 243 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 +++ + +GN + + SY+ A + + + ++ DL + L+ Sbjct: 244 EDVRKKFNFKATFGIGNKYL-IDKLHLSYQEALYAIHLSELTGNGNQVRHIYDLGVYSLI 302 Query: 296 DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 S D + + L L D NN +L TL +F N+ T++ LF+H NTL Y Sbjct: 303 FSNSLDHLKSLYKKYLNALILHDKVNNSMLLDTLRCYFDANLNINETAERLFLHINTLRY 362 Query: 354 RLNRISELTGLDLGNFDDRLLLYVALQLDE 383 RL R+ ELT DR LY+AL++ + Sbjct: 363 RLKRVEELTNTSFQKAYDRTNLYIALKVYD 392 >UniRef50_C9S158 Transcriptional regulator, PucR family n=7 Tax=Geobacillus RepID=C9S158_GEOSY Length = 542 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 114/311 (36%), Gaps = 8/311 (2%) Query: 81 PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRL--REELVMN 138 P++ G + + + + ++ L+ L Q L L + + E + + Sbjct: 212 PIQFLGNEYAELSIVSTGKEISEFDLLILDRTATALAQHLLRDLYVDEKKRVEENEWLKS 271 Query: 139 LIQAEENTPALTEWAQRLGIDLN-QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 ++ E + + G + N + V +V S + ++ ++ Sbjct: 272 WLEGEHPIENVFSYLAEYGAEPNPKGGTVLVVRFKSSMKQCSNLDMIYFKMLCRTIFEQQ 331 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI--TRMKEYGQLRFRVSLGNYFT 255 V +V N + + + L+ +++ +F V +G + Sbjct: 332 GFSTFPVDFHSSIVFIMINNREMKTWKSRMKIGLNSLLESDYIQKKKLPQFVVGVGKFIE 391 Query: 256 GPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANELARPLARL 314 + +SYRTA T+ + + FY+DL + ++ + + + L + Sbjct: 392 NVSHMDKSYRTALETIKIQHHLGGRANSCFYEDLHIYRIISLIHKYNDLYEVVMEYLEPV 451 Query: 315 KTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 D NG L TL + N T++ LF+ R TL +R+ ++ L G D N + R Sbjct: 452 LQYDEKYNGNLLETLKVYLACNGSKKETAQRLFVVRQTLYHRIQKLESLLGEDFMNPEKR 511 Query: 373 LLLYVALQLDE 383 L + ++ E Sbjct: 512 LAIEFMIKAYE 522 >UniRef50_C7MYB4 Transcriptional regulator, CdaR family n=2 Tax=Actinomycetales RepID=C7MYB4_SACVD Length = 619 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 82/386 (21%), Positives = 131/386 (33%), Gaps = 33/386 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L ++ ++ +I V DA +G R LS R Sbjct: 259 LTELVLGGADVAEVAEAVASMLGGDIVVRDAEATELGRSGAARPRMSARALNRALSASRS 318 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPE-NLRKYGELVCMTAEMMLEQS 119 A + E++G I LTG P+ + + L Sbjct: 319 AGKAIAEGDAW-------VCAVMAGPELLGSITLTGRPDLDDADRRLFERASVVTALLLL 371 Query: 120 RLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVDSGQLGV 178 + ++R EL+ +L+ A E PA L + +RLG+DL P VV + D Sbjct: 372 LRRSAAEAEDKVRGELMADLLNAPERDPATLLDRGRRLGVDLTAPHVVLTLHADGVSR-- 429 Query: 179 DSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM 238 + R ++A V ++V+L +A D + + + Sbjct: 430 ----------ARLASLAARRAVLAGVYSEQVVML---------AEATDPGELARKTAAEL 470 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 K V GP +A++Y + + DL L+ S Sbjct: 471 KALLGCPVTVGAVGPAAGPADLAKAYEESVRCVRALLALGRAGHGAAPPDLGFVGLVLSD 530 Query: 299 RGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356 R D A+ + L + D L RTL A+F L +H NT+ RL+ Sbjct: 531 RTD-VASFVRNTLGPVLDYDAARGTELLRTLRAYFACGGNLTRAKDELHVHVNTVAQRLD 589 Query: 357 RISELTGLDLGNFDDRLLLYVALQLD 382 RI+ L G D D L L +AL+L Sbjct: 590 RIASLLGADWQQPDRALELQLALRLH 615 >UniRef50_C8XKF3 Putative transcriptional regulator, PucR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKF3_NAKMY Length = 705 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 134/384 (34%), Gaps = 34/384 (8%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHG 73 +V + + V G +I + H S + + A Sbjct: 332 VVHAVAIELGCEVGVFGPDGAMIAT---------HTPGSTPASLPARLPVRARPATPGRW 382 Query: 74 VRQGINLPLRLEGEIVG-VIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLR 132 VR P+ +G+ VG V+ + GE + L R ++ Sbjct: 383 VR-----PVYADGDQVGQVVLIQGEASAELMDAVAGQVAMACSLALLRERAASRARAQAV 437 Query: 133 EELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQL-------GVDSAMAE 184 ++++ +L+Q ++ A AQ+LGI L V ++++ + Sbjct: 438 DQVLWDLLQGPVQHRVAARSRAQQLGISLLGSLRVLHGQIENVEELAAEQGWDTSHTDKV 497 Query: 185 LQQLQNALT--TPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + + A+ R + + +V + L+ D E+ Sbjct: 498 RRGVLRAVRGVDEARRLPLTGMRGDLLVAVAADLDRASVKDLAAATCA-----AIHAEWP 552 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD-SLRGD 301 LR + P + + A+T + ++ + Y++L + LL S Sbjct: 553 GLRLTWGVSRERANPMELPNALSEAETALAAARRLGGRNALL-YEELGIVRLLLGSGNDP 611 Query: 302 WQANELARPLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + L D + L RTL A+F + ++ LF+H TL YRL RI Sbjct: 612 DLQTFIEEVTGPLIAYDRDNDGALIRTLRAFFDADCSQRVAAERLFVHHKTLRYRLERIR 671 Query: 360 ELTGLDLGNFDDRLLLYVALQLDE 383 +LTGLDL +DR+ AL+L + Sbjct: 672 QLTGLDLSRHEDRMRADFALRLLQ 695 >UniRef50_D1C6M3 Transcriptional regulator, CdaR n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M3_SPHTD Length = 516 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 88/387 (22%), Positives = 132/387 (34%), Gaps = 30/387 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 ++ +D + + ++ + + + D G ++G G G + A Sbjct: 145 LSQAAMDPRGVEALLGIAAELAGRPLVLQDREGNVVGWGG----GTIVPPATAAELAAAN 200 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + G + + LPL G G + L G L + LV Sbjct: 201 GATSPLLCPGPDGT-ERLILPL-AAGAPSGYLSLVGPAGTLNESDRLVLAQTAATCSILL 258 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWA-QRLGIDLNQPRVVAIVEVDSGQLGVD 179 A R+ LV +L+ + A Q LGID P +V +++ D Sbjct: 259 GQGRTAGLGGGRQRLVADLLLGRLASDAAALARAQMLGIDTTAPVIVGLIDAP------D 312 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMK 239 A + AL +NL + +V D + L ++ Sbjct: 313 RPAAARHLVAQALGPAVGDNLAPVPGGIGFLV-----------QGSDPSRAASALRPTLR 361 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY---QDLMLPVLLD 296 G V+L R A+ T+ + + DL L LL Sbjct: 362 REGGNGIAVALSRPVPTILQAPEGLREARFTLGLQRAGAVTLPVARAGSVDDLGLFSLLY 421 Query: 297 SLRG-DWQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 L G A L L+ D + L TL + H ++ L IHRNTL Y Sbjct: 422 PLWGNPAVAAFRDAVLGPLEDYDRRRHSGLIETLEVYLSHGGALAEAAEHLGIHRNTLSY 481 Query: 354 RLNRISELTGLDLGNFDDRLLLYVALQ 380 RL RI+ELT DLGN DRLLL VAL Sbjct: 482 RLQRIAELTRRDLGNPRDRLLLQVALL 508 >UniRef50_Q3YB12 Putative regulator n=1 Tax=Geobacillus stearothermophilus RepID=Q3YB12_BACST Length = 642 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 144/398 (36%), Gaps = 21/398 (5%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIG-SGDRERIGELHEGA------LL 53 + L I +I + + D I +G E+ + Sbjct: 227 LMEEVLKENDLSSITNALHQITKIPVFIEDVNFNPIAVAGCPEQDAPFSSESFKKWIHKK 286 Query: 54 VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE 113 + + A+ + + + P+ L+ +IVG + ++ +L+ Sbjct: 287 KKHFKDLKTLKQALFLEISPTHKRLMTPIYLDRKIVGYCSFLYQETAPQEVDKLIIQHGA 346 Query: 114 MMLEQSRLMHLLA--QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV 171 + L + R++ + +++ + + +T+ A +G LN P + ++ Sbjct: 347 LACSLYLLNERTRFNTEQRIKGNFLDDILSKQISFEEMTKRAYYIGFQLNDPYFMIAIDT 406 Query: 172 DSGQLGVDSAMAELQQLQNALTTPERNN----LVAIVSLTEMVVLKPALNSFGRWDAEDH 227 + V + L N ++ +N L+ S +V+L L + + E+ Sbjct: 407 LLQKPSVKEELEFNDDLINDISIFMKNRGLNALLGQKSGKVIVLLSECLLLKNKMNKENF 466 Query: 228 RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQ 287 K + + +Y Q F+V + + ++ Y + + V + R F+ Sbjct: 467 CKALIDYCS--SKYPQYLFKVGISSSTHSIEEASQLYEECLSALKVANRH---QRIVFFD 521 Query: 288 DLMLPVLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 L + ++ ++ + + L +L D + +TL + + T++A+ Sbjct: 522 SLGIEGIMFQMKNISPIQKFIRKKLGKLIEEDKSRDMEFTKTLYYYLSNGCNVHKTARAM 581 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 + L YRL +I+E+ +D+ +Y++L+L Sbjct: 582 NFSISGLRYRLQKINEILQMDINLPSVSYQMYLSLRLL 619 >UniRef50_Q5WK00 Regulator of polyketide synthase expression n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK00_BACSK Length = 410 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 70/398 (17%), Positives = 141/398 (35%), Gaps = 51/398 (12%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGS------GDRER-------------IGEL 47 V ++ + V ++ ++ D+ R I Sbjct: 13 SFSTLDQFVEELGDLLKCPVTVENSHHHLLAYSEHGEGTDQARVSTIIGRKVPAPLIHRF 72 Query: 48 HEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLE-GEIVGVIGLTGEPENLRKYGE 106 + ++ I A + G+ + L +R + G ++G I ++ L Y + Sbjct: 73 WKDGIMASLNQSSEPISIAEIPDM-GLGPRVALSVRDQEGRVLGYIWVSETNRTLTAYEQ 131 Query: 107 L-VCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRV 165 + A + + + EE + L+ + E ++ + Sbjct: 132 QWLKKAARKAARLMQKANRYKRGEASNEERLWKLLTNTHELGDIPEEVRQE----ERQSS 187 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 + ++++ + +++ A + L + +A + + Sbjct: 188 ILLIDLANQLEHMETVQALFESSNAVLFMFDGEFFIAFIYG------------------K 229 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE-SRCY 284 D RK+V ++ + ++ GN AR+Y AK + + K+ E + C Sbjct: 230 DLRKQVGAFAEKLPD----GVHIAAGNPSFAVDGCARAYEQAKALLELKKRFGSELADCL 285 Query: 285 FYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 FY + + + +L+ D N L TLA + + A +K Sbjct: 286 FYYEAGAYKYIQPYEDTAMIAGDHPAIEQLREYDAENQTSLLETLAMYIEKDGHLTAAAK 345 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQ 380 AL +H N+L+YRL RI+ELTGL L N +R+ LY+ LQ Sbjct: 346 ALHVHPNSLQYRLKRIAELTGLHLRNPAERIGLYLDLQ 383 >UniRef50_A9CLI8 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLI8_AGRT5 Length = 601 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/407 (14%), Positives = 142/407 (34%), Gaps = 28/407 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMD-ARGRIIGSGDRERIGELHEGALLVLSQGR 59 M L + + R++ + V+D +II + + A + G Sbjct: 189 MLEHVLSDGSVSSLASMAGRLLPDPLIVVDFTTNQIIAGRSPL-PDTIDDDAWQAAASGA 247 Query: 60 VVDIDDAVARHLHGVRQGINLPL------------------RLEGEIVGVIGLTGEPENL 101 AR +P+ ++ + VG + + P Sbjct: 248 FAKALTKAARESLSTVASQMVPILLDTGSIRLKVAARMETLMVDKQHVGALIIFSNPATS 307 Query: 102 RKYGELVCMTA--EMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGI 158 + +++ +A + ++ R ++R + EL +++ + +++ A RLG+ Sbjct: 308 GELDQIMLDSAKFALSVQMMRSFLRFRFETRTQSELFFEVVERRWRDPADISQRATRLGL 367 Query: 159 DLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 D + + + +V+ ++Q + + + +V L P + Sbjct: 368 DFSSSQQMIVVDFPQKAKAFGGGSVDVQHTISRVMQQVGLAANLVAIEGGLVCLMPYETT 427 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 R E K ++++ +K Y + V G ++ + +G+ Sbjct: 428 RRR---EKTGKIMQRIADELKRYFEEAPIVVASTRCAGLDDYPSAWDRCNRMISIGRSFG 484 Query: 279 PESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQ 336 LP+L+ + + + + + D + TL+ + + + + Sbjct: 485 LTGAVSTQDFGPLPMLVSAADVSDVRSFVRESIGAMAEHDREHQTPYLETLSVYLQESCR 544 Query: 337 PLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 A + + +H TL YRL RI EL G+D+ D R + +A++L Sbjct: 545 AQACADRMGLHVTTLRYRLARIQELFGIDVETPDKRFAVELAIRLHR 591 >UniRef50_A2SP17 Transcriptional regulator, CdaR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SP17_METPP Length = 659 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 69/407 (16%), Positives = 151/407 (37%), Gaps = 36/407 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGS-----GDRERIGELHEGALLVL 55 + G LD I R + ++ ++ + + + + + Sbjct: 251 VIGALLDGGGVTAIARIVARHAGVEVAILGTDLGVMAAYPAQVSNGDWLERVETAVRQFP 310 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTG--EPENLRKYGELVCMTAE 113 + +R P+ G+ +G + + EP +++ A Sbjct: 311 GYANNTSVTSRERDGWLSLR-----PIVAGGDRIGWVCMRSNSEPAEMQEAASRQGAVAS 365 Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPA-LTEWAQRLGIDLNQPRVVAIVEVD 172 + + +A+ S L L+ +L++ E IDL P V ++ Sbjct: 366 ALYCLEQRAASVARASAL-GALMWDLLEGTPPVRQSALERLTEFHIDLRGPHRVVHCTIE 424 Query: 173 S-------GQLGVDSAMAELQQLQNALTTPERNNLV--AIVSLTEMVVLKPALNSFGRWD 223 +D+ + + +++A+ + A +V + PAL D Sbjct: 425 GLAETARGEGWNMDTVQRKQRDVRDAIERALSAAGLKLASSRGDLIVAIIPAL------D 478 Query: 224 AEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAK-TTMVVGKQRMPESR 282 A ++++ L + ++R + F P ++ + + AK + VGK +S Sbjct: 479 AAQVTRQLKSLNEEILARDKVRTFWGVSAPFDSPSQLSNANQEAKCAALAVGKLGTAQSP 538 Query: 283 CYFYQDLMLPVLLDS----LRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQ 336 ++ L + LL + G + R L + D ++G+L +T+ ++ ++ Sbjct: 539 VVIHEHLGVLTLLLNGGGIAEGHDLRKYVDRMLGPMLKYDSAHHGVLAKTIRSYLDNDCS 598 Query: 337 PLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T+ LF+H T+ YRL + ELTG+DL +R+ + +AL + + Sbjct: 599 LKLTALQLFVHEKTVRYRLAQFEELTGVDLRRHRERMSVDLALLMHD 645 >UniRef50_Q0SAZ0 Probable carbohydrate diacid regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SAZ0_RHOSR Length = 372 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 134/373 (35%), Gaps = 18/373 (4%) Query: 26 INVMDARGRIIG-SGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINL-PLR 83 + + GR + +GD + L A L + D + + I + + Sbjct: 1 MLITTPDGRQLCRAGDESELNRLASSAALDSTGRVRTDSTEGGLGLHRLGDEFIAVSAIS 60 Query: 84 LEGEIVGVIG--LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQ 141 G G + TG P + A L +R + + + + + R V +L+ Sbjct: 61 ANGIDHGRLVHFSTGHPLRSEDLYLVEQAAAVCALVVARELVVSSVEEKHRANFVRDLLL 120 Query: 142 AEENT-PALTEWAQRLGIDLNQPRVVAIVEVD---SGQLGVDSAMAELQQLQNALTTPER 197 + A+ G DL++P VV +++ D + + + M +++ A T+ Sbjct: 121 GRGGEHEHVVAHAKTFGWDLDRPVVVVVIQPDPVGEDEPSMPTRMPLVERQARAFTSA-- 178 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS---LGNYF 254 VA V D V +L+ ++ G R + Sbjct: 179 ---VAGRDTGAAVTALATETVILMGVGTDTMNLVHELVAYVRGDGGGGRRPFGVGVSRPT 235 Query: 255 TGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLAR 313 I Y A+T + VG+Q + DL + LL + D + + L Sbjct: 236 DSVDGIPALYGQARTALKVGRQITGAWAVTHFDDLGVYRLLSLVEDDRELESFASETLRE 295 Query: 314 L-KTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDR 372 L +RRTL N+ T++ L H NTL YR+ ++ ++ G + + R Sbjct: 296 LTADTPEAQDMRRTLEVLLATNINIAETARQLHFHYNTLRYRVVKLEKMLGSFTDHPELR 355 Query: 373 LLLYVALQLDEER 385 L L +AL++ R Sbjct: 356 LDLSLALKIMAMR 368 >UniRef50_A1T4Q7 Transcriptional regulator, CdaR family n=4 Tax=Corynebacterineae RepID=A1T4Q7_MYCVP Length = 554 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 78/400 (19%), Positives = 143/400 (35%), Gaps = 31/400 (7%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIG--------------SGDRERIGELHEGAL 52 Q +V + +DARG ++ S +L A Sbjct: 146 RGAGLQLLVREVSNLARNPAMALDARGNVVAHNGFTAETAAALTESILPLLTADLPAAAR 205 Query: 53 LVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGL------TGEPENLRKYGE 106 L V+ A GV I+ +RL G + + G + R Sbjct: 206 LSAHHDTRVERFGAPGG---GVWTVISTAIRLGKAFEGWVLVVVPSAEPGGHDLARHIVV 262 Query: 107 LVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRV 165 TA + E R + + R R + V L+ ++ + A ID++ Sbjct: 263 TEQATAIIGSEMLRQHSVDEAEERARGDFVQALVHGHFSSEHDMRARADYHEIDIDSVFG 322 Query: 166 VAIV--EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD 223 V + V G ++M L + + V +VV++ + Sbjct: 323 VFVAPGAVPRGVDNPAASMVRLARYAANVAPDPAVRSYVTVLGDVLVVVRSLRGADDTAM 382 Query: 224 AEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 ++ + E + ++ V+ G +A SYR A+ + + ++ Sbjct: 383 RKEMTRYAEAMADELQNRRGTPAAVAYSRPARGAQEVAGSYREARIALGIARRLGHTGAV 442 Query: 284 YFYQDLMLPVLLDSLRG-DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSK 342 YQDL +L + D +A L L++ L L + H AT++ Sbjct: 443 -SYQDLRSFTVLADVADTDQSRALVADVLGPLRSA---PDLLDFLIGYLAHGGNVNATAR 498 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 AL +HRNT+ +L+R+S TGLD+ D++ +++A++LD Sbjct: 499 ALNVHRNTMLTKLDRVSRATGLDIRLPDNQFTVWLAIRLD 538 >UniRef50_C3JF01 Transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JF01_RHOER Length = 533 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 70/397 (17%), Positives = 139/397 (35%), Gaps = 37/397 (9%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSG------DRERIGEL--HEGALLVLSQGRVVDID 64 D+ ++++ + + + RI+ D R + H+ + R + Sbjct: 140 DLANSIAQVLNGPVTIENQSSRILAFSADQAFGDEARKQSVLGHQVPQHYSDRLRSMGYF 199 Query: 65 DAVARHL---------HGVRQGINLPLRLEGEIVGVIGLTGEPEN-LRKYGELVCMTAEM 114 + + G+R + + + +I+G I + + E + LV Sbjct: 200 NKIYGSTLPVFLPGIGPGIRPRVGMRIHAASQILGSIWVILDEEPNELQVKTLVEAAGVA 259 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSG 174 + R RLR V+ L+ + E LG ++ V G Sbjct: 260 AMSLLRAKLAADSARRLRLGEVITLLSGGTSAKEAAER---LGYGRSKAN-VLAAGFRGG 315 Query: 175 QLGVDSAMAELQQLQ----NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKR 230 A A++ QL L ++ A + T V+ ++ + D + R+ Sbjct: 316 AGASLEAEADVDQLALTLNTYLHQVFPLSVAAAIGGTVYAVI---PHTRHQTDDDYVRRI 372 Query: 231 VEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ--RMPESRCYFYQD 288 + R + + +G T ++ +S A + V + D Sbjct: 373 ASEFADR--SRSEKSVVIGIGATVTDVMTLEKSRDEADRALRVLRSTWNSSGRTVARADD 430 Query: 289 LMLPVLLDSLRGD--WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKAL 344 + + LL L + + PLA L+ D ++ L TL AW A + + Sbjct: 431 VQINSLLLRLSDALADENETASGPLAVLREYDRTHDINLVDTLRAWLDTFGDIPAAASLV 490 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 IH NT YRL +++ + G+DL + + R L + ++L Sbjct: 491 HIHVNTFRYRLKKLAGIAGIDLDDPETRFSLMLQIRL 527 >UniRef50_C1YR51 Transcriptional regulator, CdaR family n=10 Tax=Actinomycetales RepID=C1YR51_NOCDA Length = 665 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 76/387 (19%), Positives = 122/387 (31%), Gaps = 25/387 (6%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + L +++ A ++ + + DA S G + EG G + Sbjct: 283 LTDLVLRGGGVREVAAAVAEVLGGTVLIHDATSD--SSVTASPEGVVREGVPWDAGDGDL 340 Query: 61 VDIDDAVARHLHGVRQGINLPLRL--EGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ 118 + + VR G E +G + L G + L L Sbjct: 341 AEAVRSSLASGRAVRAGRAWVATAAAGTEPLGTLVLRGVELDSTDQRVLERSAMVTALLL 400 Query: 119 SRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQLG 177 + + RLR +L+ L++ P +L + A L DL+ P V+ + E G G Sbjct: 401 LIRRSVSETEHRLRGDLLDELLEVPARDPVSLRQRAALLHADLDAPHVLVVAEAPGGDPG 460 Query: 178 VDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITR 237 + A E +A +V+ P + ++ Sbjct: 461 RLRSAAT--------HVAETTGGLAGSRSGRLVLALPGRDPSAVG---------RRVADE 503 Query: 238 MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDS 297 + L GP S ++ A + + E DL LL S Sbjct: 504 LSGAVNGPVTAGLAGPTAGPASFGDAFAEAARCLQTLRALGREGDVATTGDLGFSGLLLS 563 Query: 298 LRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 + ++ L L D LL TL A+F + L IH NT+ RL Sbjct: 564 -QDRDVPGFVSATLGPLLEYDARRGTLLVETLRAYFAAGGNLSRAKEDLHIHVNTVAQRL 622 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLD 382 RI +L G D L L +AL L Sbjct: 623 ERIGQLIGADWQRPGRALELQLALHLH 649 >UniRef50_D2LR07 Transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR07_BACS4 Length = 559 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 151/407 (37%), Gaps = 32/407 (7%) Query: 6 LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG--DRERIGELHEGALLVLSQGRVVDI 63 L K +DI + + I+ I ++D G++ + + E + + + Q D+ Sbjct: 149 LHEKGLEDISSILYKHINMPIAIIDHSGQLRANKKFNEELLAVFNGEKKGTVQQIPSSDV 208 Query: 64 DDAVARHLHGVRQGIN-------LPLRLEGEIVGVIG---LTGEPENLRKYGELVCMTAE 113 + H +++ + LP+ G + + E L Sbjct: 209 LYSEHPLFHQMKEYLVHNHIFFLLPIVNNHHNQGSLLFHPVDREKLTTFVMNVLDHSLTA 268 Query: 114 MMLEQSRLMHLLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAIVEVD 172 L + + + RL++ ++ L Q E T L AQ LG DL +P + + E+ Sbjct: 269 CALYFVKENAVELTEVRLKDNFILELAQKYSEVTTQLISKAQLLGYDLARPYLCLVGEMT 328 Query: 173 SGQL--------------GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS 218 + S LQ+ R + E+++ A N Sbjct: 329 HNDRKKTLKVQGESLGSSSLQSRNYYLQKEITRAGKNLRRRTMTTFDEDEVIIFLEADNQ 388 Query: 219 FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM 278 A +E+ + + + + F + + G + SY AKT + +GKQ+ Sbjct: 389 PYMETANQFLDNIEERLYELLSH--ITFSWGIATHKDGHYAFHNSYEEAKTALKIGKQQK 446 Query: 279 PESRCYFYQDLMLPVLLDSLR-GDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNV 335 F+ D + LL ++ D A + L L D L T + ++ Sbjct: 447 GLGERTFFSDTRINRLLMAISQEDAIATIVKDTLQPLLDYDEKRQTDLIYTFIIYNKYKG 506 Query: 336 QPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 T++AL +HR +L +RL I LTGL L + DD LL ++++L Sbjct: 507 NVSQTARALNLHRQSLLHRLRNIESLTGLSLVDSDDLFLLELSVRLW 553 >UniRef50_B7CD11 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD11_9FIRM Length = 488 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 53/392 (13%), Positives = 132/392 (33%), Gaps = 25/392 (6%) Query: 10 MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVAR 69 + + ++ +++D + + + S ++ A ++Q I D V + Sbjct: 99 VIEKLLVLLNKMLDNPVALYSSNYDCYASSEKN-------PAGFNVAQNVKSYIPDIVTK 151 Query: 70 HLHGVRQGINL----PLRLEGEIVGVIGLTGEPENLR--KYGELVCMTAEMMLEQSRLMH 123 H + +++ + ++L + +T + L + + + RL Sbjct: 152 HQYFIQKREYVEYINKIQLFDGRYFYLVMTEKNNELTGMDFCGMEDAITSLQFAMMRLSA 211 Query: 124 LLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEV---DSGQLGVDS 180 +++ +++L L+ + + A LG+ V + + ++ Q Sbjct: 212 EEELNNKYQKDLEYRLLVGTLSNEEEDDVANILGLKDTDDLRVVVFRLLSRNNNQRFTSE 271 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM-K 239 + + + ++ + + + K + +++ + + K Sbjct: 272 QLRQTEIVEKEFLRDLPEKYTMSNTNQIIYICKKDEQMSNLQLRLRIEELQKKIQSDLDK 331 Query: 240 EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQR-----MPESRCYFYQDLMLPVL 294 + F V +G G ++ S+ +K + L + Sbjct: 332 RHANAEFIVGIGKKVKGYHALKESFSDSKIALEYIHVIRKVIGDENKSVVECSKLGFFRM 391 Query: 295 LDSLRGD-WQANELARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 + + + L +L D NG L TL + + TSK +F+H T+ Sbjct: 392 FVKVSDKKELLSYVPESLQKLYEYDKQKNGSLIETLECFLNNKQSLKQTSKKMFVHYRTV 451 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 YRL +I E++G+D N + L + L Sbjct: 452 SYRLEKIKEISGMDFDNPAEMLAVRNGLITYR 483 >UniRef50_A8RIM5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIM5_9CLOT Length = 504 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 135/389 (34%), Gaps = 34/389 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 M+ QDI+ + +I++ D+ II + E A Sbjct: 142 MSQLLASGAGEQDILDYLAEYVPASIHLCDSDKNIIFTSQSEEFHSEMAIA--------- 192 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQ-S 119 I+LP+ GE+ G + L+ A + Sbjct: 193 ---------------DRISLPIMCMGEVCGYLEAATNRYLDENLEGLLKNAANLSAVLYL 237 Query: 120 RLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVD 179 + + + + R + L + + E A+ G N + +++++ + Sbjct: 238 KKYYTVEIEQRYISGFLKELFRQNMGVKQIVEKAEGYGWHENDSYLAVSIQLEAARNITK 297 Query: 180 SAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM- 238 A + + P+ N I ++ + + + + + L + Sbjct: 298 VPEALAEMTR---LIPKSNYYFCIQDDLLNIIYRTEKKLSPQELYDLVTEVITNLNQYIS 354 Query: 239 KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 K YG F + + + +++ + + ++ + +R Y+D+ +L + Sbjct: 355 KTYGSFTFYAGISSIASELFQLSQKIQESADSLQFCRVFN--NRLVKYEDMGALRMLATY 412 Query: 299 RGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRL 355 ++ P + RL D NN TL + +N+ T+K LFIH T+ +R+ Sbjct: 413 SHRSNLEQVIPPAVTRLAEYDKLNNTQYLETLDSLLGNNLNLSKTAKQLFIHYKTMLHRM 472 Query: 356 NRISELTGLDLGNFDDRLLLYVALQLDEE 384 +RI E+ + L + RL + + ++L Sbjct: 473 DRICEIAEISLDDRQTRLDVELGVKLYMM 501 >UniRef50_D2Q1Z0 Putative transcriptional regulator, PucR family n=4 Tax=Actinomycetales RepID=D2Q1Z0_9ACTO Length = 551 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 129/387 (33%), Gaps = 34/387 (8%) Query: 25 NINVMDARGRIIGSG------DRERIGELHE---------------GALLVLSQGRVVDI 63 + + D R++ D R+ + + R V + Sbjct: 158 PVTIEDRSSRVLAFSGRQDEADTARVETILGRQVPQRFSRILAEQGIFRELYRTDRPVYV 217 Query: 64 DDAVARHLHGVRQGINLPLRLEGEIVGVIGL-TGEPENLRKYGELVCMTAEMMLEQSRLM 122 A + + +R EI+G I P + + L + + R+ Sbjct: 218 PPLPATENEFTIPRMAVAVRAGDEILGSIWAAVHGPLSEERSQALRDAAKLVAMHMLRIR 277 Query: 123 HLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + RLR +LV ++ +QP V + + G D Sbjct: 278 AGADVERRLRADLVSTALEGGAGAREALNRLGLA----DQPVAVLALGISELAAGTDFGD 333 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVL--KPALNSFGRWDAEDHRKRVEQLITRMKE 240 A L + L +L A+ + ++ D D R +L T + Sbjct: 334 AGLVTERQRLADAFAMHLGAVHPRSAAALVGDVAYGLIPVHRDRTDGEARAVRLGTDFLD 393 Query: 241 YGQLRFR--VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSL 298 R + +G + + A + V + R D+ + L+ L Sbjct: 394 RIGDRVTAQIGVGPVVQDAFRLPHAREGADRALRVLRAGRGTQRVARMTDVHVEALVLEL 453 Query: 299 RG--DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYR 354 R + ++ P+ARL D +N L TL AW +A + +L++H NT YR Sbjct: 454 RDLVAARGDQPTGPVARLFAYDAQHNTNLVETLRAWLDAFGDVIAAAASLYVHPNTFRYR 513 Query: 355 LNRISELTGLDLGNFDDRLLLYVALQL 381 L R++E+ LDL + + R + L++ Sbjct: 514 LRRLAEVGELDLDDPEARFAAMLQLRV 540 >UniRef50_A6TL42 Transcriptional regulator, PucR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TL42_ALKMQ Length = 411 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 106/307 (34%), Gaps = 24/307 (7%) Query: 94 LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEEN-TPALTEW 152 L P + + E++ Q L+ E +L+ + + Sbjct: 110 LIEIPYEISYATIISRGLTEIISNQRNLLQQT--------EFFEDLLSRDLTKHQRALDR 161 Query: 153 AQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE-----------LQQLQNALTTPERNNLV 201 D V ++ ++ ++ L+ ++N ++ + Sbjct: 162 GTYFQFDSQLSYTVIVISINERAGCHQYSLETSNEQHGIKLKLLRIVKNVAKNQKKKVIC 221 Query: 202 AIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIA 261 +V+ + N+ + E+++ K + +G + I Sbjct: 222 GNKRNQMVVLYGASPNTESIIQKNEVMNYAEEVMKHGKFEAIGCISIGIGRNYDVTKEIW 281 Query: 262 RSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL-DSLRGDWQANELARPLARLKTMDN- 319 +SY A + G+ R + Y L + +L L L D Sbjct: 282 KSYEEANRAVECGRGR-ESRQVVHYDGLGIYRILSYENLHPELIQLYQEVLEPLVKYDED 340 Query: 320 -NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA 378 L +T+ +F++N S ++ H NT+ YR+ RI E+T +DL + D RL +++A Sbjct: 341 KGTELVKTVKMFFKYNGNIKRISTEMYTHYNTIVYRIQRIQEITQMDLEDDDTRLNVHLA 400 Query: 379 LQLDEER 385 L++ E + Sbjct: 401 LKILEMQ 407 >UniRef50_A5N1Y2 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N1Y2_CLOK5 Length = 410 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 109/271 (40%), Gaps = 22/271 (8%) Query: 128 DSRLREELVMNLIQAEEN-TPALTEWAQRLGIDLNQPRVVAIVEVDS-----------GQ 175 + + N+I + N ++ + + ++ VD+ + Sbjct: 139 EQESMNSFIKNIIFGDLNYDEDEVNKSKFYKYNPGKTYCSMVLYVDNFISFVKQGGVWNE 198 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 +++++ + + I+ T +V++ P +++ + E+++ Sbjct: 199 ELETRTRQQIEEIIVNIMNRLNKKSINIIEDTFIVIMFPVE----KYERDKINSIAEEIL 254 Query: 236 TRMKEY-GQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL 294 + + +L+ + +G+++T + S A+ + + +++ Y+D+ + L Sbjct: 255 SNINSKIEELKISIGIGSFWTRLEELKDSVNKAQNALKI--LGGNKNKVCSYKDMGMYRL 312 Query: 295 LDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTL 351 L + D L L L D N+ L TL + N + T++ LFIH+NTL Sbjct: 313 LFDMSKKDEMKRLLREILGELMEYDSKNSTSLVETLKVYINENCNLIHTAEELFIHKNTL 372 Query: 352 EYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 +YR+ RI E+ +L N + +A ++ Sbjct: 373 KYRIKRIEEILNCNLRNMEHLFRFDMAFKIK 403 >UniRef50_B2A0Y4 Putative transcriptional regulator, PucR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0Y4_NATTJ Length = 518 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 140/406 (34%), Gaps = 45/406 (11%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRE---------------------R 43 + + IV +I+ + + D+ +++ Sbjct: 127 LIRGRGLNYIVKIGSQILGNPVILADSSYKLLAYYAENEVIDPVWKDLTTKGYCSHNFVN 186 Query: 44 IGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRK 103 + + + V + + +A+ + + ++ +IVG +G+ +N ++ Sbjct: 187 LFKRQKLIEKVAKSPEPILVKTGLAKDIR----RYLGKILIDDKIVGHLGVLEYDQNFKE 242 Query: 104 YGELVCMTA--EMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPAL-TEWAQRLGIDL 160 + + E + + E L+++L+ N + E + + Sbjct: 243 EDHEITKLLCDVISSEMQKNNLFRNFKGVMYESLILDLLDKRVNDRRIMEERLKSSQWEP 302 Query: 161 NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG 220 + V + V +++ + + ++ +V+L + Sbjct: 303 SDYYKVVTINVPKDNTTSHIVNYLRDRIERLIPFCK-----SVCYEGNIVLLLDFKETD- 356 Query: 221 RWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPE 280 D E+ ++++ + + F + Y + + G+ + Sbjct: 357 --DIENIDRKLKDFLNS------NNLTAGVSFTFNDLMKLGIYYNQSVNALQFGETLDTK 408 Query: 281 SRCYFYQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQP 337 ++++ + LL + + P + ++ D N +TL +F + Sbjct: 409 GPLFYFESYYIYNLLSEVSTRQNLSSYCHPAIYKIIAYDKTNGTDYYKTLYEYFLNCNNI 468 Query: 338 LATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 T+K L+IHRNT+ +RL ++ E+TGL+ + + L+++ ++ E Sbjct: 469 TMTAKKLYIHRNTMAHRLEKLKEITGLNFDDGEQCFRLFLSYKILE 514 >UniRef50_C0B530 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B530_9FIRM Length = 547 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 55/402 (13%), Positives = 140/402 (34%), Gaps = 34/402 (8%) Query: 3 GWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVD 62 ++ + I+ +I +D + + + E +L + + Sbjct: 144 ELAINDRSIHQILQTLSTLIQEPTAYVDTVFHKVYFSE-----NVSEDSLYLKGLSYEII 198 Query: 63 IDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGE------PENLRKYGELVCMTAEMML 116 +++ ++ + + + + G I L + P+ + A +++ Sbjct: 199 LNEYREKYQ-------CIDVVNKEQKFGYIMLLSDRSDRTYPDTDSNIYKTAIEYASIVI 251 Query: 117 EQSRLMHLLAQ--DSRLREELVMNL-IQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDS 173 + + + + + V +L + + + A G +L+ VAI+++++ Sbjct: 252 ILRMQIRISNRMIEEKYYSSFVGDLMLNNVKTREEINTRAHLYGWNLDGGGFVAIIDINN 311 Query: 174 G--------QLGVDSAMAEL--QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWD 223 G + + + Q ++ ++ I + Sbjct: 312 IKKYYLRNLDTGTNEKLQKYTDQIFDTSIKYIKQAFPSTIYYSQSDFIAFLITGKLPVSA 371 Query: 224 AEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC 283 + Q+ + + +G Y +I SY+ AK + Q +R Sbjct: 372 RKTLADTFSQIQHSLLNAVPFTISMGVGMYVDDIINIHNSYQQAKQVIQTIYQIQQFNRL 431 Query: 284 YFYQDLMLPVLLDSLRGDWQA-NELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLAT 340 +FY + + LL S+ + +A + + L+ D ++ L TL + Sbjct: 432 FFYDQIGIYRLLFSISSNNEAIEFCDKYVKPLQQYDDQHHANLIETLQSIINCGWNLKLA 491 Query: 341 SKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 S+ LF+H N+++YR +I +L +DL + + +AL++ Sbjct: 492 SEKLFLHYNSVKYRFQKICDLLEIDLRDNSRHTEIELALKIY 533 >UniRef50_P94393 Uncharacterized protein ycgP n=6 Tax=Bacillus RepID=YCGP_BACSU Length = 411 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 68/401 (16%), Positives = 153/401 (38%), Gaps = 33/401 (8%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGR-VVDIDDAVAR-- 69 ++ + + + A ++ + I + + V I + + Sbjct: 16 KLIDFISYELQKPVILESADFFLLAY-NSYYINHFDSANQQTIFSKKCPVQIFERFLKDG 74 Query: 70 -----------------HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGE--LVCM 110 G+ Q + + + +GE++G I + +NL L Sbjct: 75 IIEKLKTEPEPFRVNKIESIGLNQRVVVSAKHKGEVMGYIWIQELDQNLTDEELDFLYET 134 Query: 111 TAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIV 169 + + + L + E+L+ I + + L A+R+ L V I+ Sbjct: 135 SFHVGKIIYKTNKLKQEKEEKAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVIL 194 Query: 170 EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRK 229 +G ++ + +++ L ++ + V + ++V+ A S + + Sbjct: 195 HAANGD--GEAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVV--ASFSQKSSVSSAASE 250 Query: 230 RVEQLITRMK-EYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRC-YFYQ 287 + +L+T + + +GN + + +SY A + + + Y Y Sbjct: 251 FINKLLTHFHFQKIPTPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITGNQENIPYEYA 310 Query: 288 DLMLPVLLDSLRGDWQANELARP---LARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL 344 L + L+S+ + E L + K +++ L +TL + +N + ++ L Sbjct: 311 KLGIYRYLESIEQKNEFLEYENKDLALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQL 370 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 FIH+NTL YR+ +I+E+T +DL +F R LY+ L L +++ Sbjct: 371 FIHQNTLNYRIKQITEMTSIDLSDFRTRCQLYLDLMLMKKK 411 >UniRef50_Q5WM17 Regulator of polyketide synthase expression n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WM17_BACSK Length = 562 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 64/409 (15%), Positives = 141/409 (34%), Gaps = 30/409 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIG--SGDRERIGELHEGALLVLSQG 58 + L + I + DA+GRI G G +G + + + + G Sbjct: 144 LLSLMLAGNHLSALAEHVAGYAAVPIVITDAQGRIKGKSHGAEPVVGLVSKVYKHMRTSG 203 Query: 59 RVVDIDDAVAR----HLHGVRQGINLPLRLEGEIVGVIGLTGEP-----ENLRKYGELVC 109 + + + H G I ++ +I G + + + L Sbjct: 204 QESEHHPLERKIQTLHTDGTDVHILPIIQANEQIQGYVFAVNRDKMDSSDLATAFILLEH 263 Query: 110 MTAEMMLEQSRLMHLLAQDSRLREELVMNLIQA-EENTPALTEWAQRLGIDLNQPRVVAI 168 + + ++R+R V +L Q E L A+ LG +++ P + + Sbjct: 264 AGTAAAFWFLQENTVQETEARMRNHFVADLAQGLIETEAQLKTRAEALGYEVSVPYIAIV 323 Query: 169 VEVDSGQLGVDSA-------------MAELQQLQNALTTPERNNLVAIVSLTEMVVLKPA 215 + + + + + +++ ++ ++++ Sbjct: 324 GMLHNMEELYSRSDQVASFKDWQLSMVHYIEEEIYYAGVTVERETMSTFMDGQLLIYLAV 383 Query: 216 LNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGK 275 R +++ + + + +G+ + Y+ AK +++G Sbjct: 384 PCEDYRTTVNGFLDLLDRRLAHL--LPDVEITWGIGDQQINTYAFEDRYQEAKQALLLGI 441 Query: 276 QRMPESRCYFYQDLMLPVLLDSLRGDWQAN-ELARPLARLKTMD--NNGLLRRTLAAWFR 332 R + FY D + +L + + + + A L D L T A+ R Sbjct: 442 GRKGQGSRIFYTDTRIDRVLYKIGQERELRSLVLDYAAPLFAYDEQRQMDLVGTFVAYQR 501 Query: 333 HNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 + + T++ L +HR +L YRL +I LT L L N DD LL +++++ Sbjct: 502 NQNKVTQTARFLHLHRQSLLYRLRKIEALTHLSLANPDDVFLLDLSIRI 550 >UniRef50_A8WDN0 Putative regulatory protein n=1 Tax=Streptomyces eurythermus RepID=A8WDN0_9ACTO Length = 641 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 80/387 (20%), Positives = 136/387 (35%), Gaps = 28/387 (7%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60 + LD +++ R + + V D G + G I HE L Sbjct: 265 LLELALDGAELDEVLDHCARELGGALAVYDRHGDTV--GRLRNIRRPHEAELE--RAYLD 320 Query: 61 VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120 + A G G ++ TG+P EL+ A ++ Sbjct: 321 LHASGAPVELADGTWMATLTARSDPGWLLHRPDGTGDPGPP----ELLFAVANVVSMVLE 376 Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180 L D + R++L+ +LI A+RL + L++P +V I D + Sbjct: 377 LRRSAPADHQWRDDLLEDLISIHHPAEVAVARARRLQVRLDRPHIVVIARPDGPVAEHAT 436 Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240 A A + R + + +V+L P +D ++ R+ Sbjct: 437 AWAT--------SWVRRRRGLKMTREDFVVLLLPG---------DDPAAMAHEVSARLSA 479 Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300 ++ V GP SI R Y+ A + E R +DL LL + Sbjct: 480 ALEVPVTVGAAGPADGPESIQRFYQEAMRCVEALIAMGGEGRAACARDLGFLGLLFA-ED 538 Query: 301 DWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRI 358 + + + + D +L TL A+F+ P ++ L++H NT+ RL RI Sbjct: 539 YDVTEFVNKIIGPVIEYDTQRFTVLVETLEAYFQAACSPTRAAELLYVHPNTVSRRLERI 598 Query: 359 SELTGLDLGNFDDRLLLYVALQLDEER 385 ++L G D L L +AL+L R Sbjct: 599 TQLLGRGWQEPDHALELQLALRLHRTR 625 >UniRef50_B4BLE6 Transcriptional regulator, PucR family n=2 Tax=Geobacillus RepID=B4BLE6_9BACI Length = 560 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 115/301 (38%), Gaps = 24/301 (7%) Query: 102 RKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDL 160 + L +T + L + M + + RL+++ V +L E + + A+ LG ++ Sbjct: 257 EQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYHSWDYILSRAKSLGYNV 316 Query: 161 NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNN--------------LVAIVSL 206 N P V I ++ + + + + R+ ++ Sbjct: 317 NLPYVCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVVLAGKWIHKEVMVTYQQ 376 Query: 207 TEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRT 266 +++ + + VE + K + L + G + S+ Sbjct: 377 ERLIIFLETTLNQVQDVVNLFLDHVENRLK--KRFPGLMMSWGIAEQQAGIRTFHDSFNN 434 Query: 267 AKTTMVVGKQRMPESRCYFYQDL--MLPVLLDSLR-GDWQANELARPLARLKTMDNN--G 321 AK + +G+++M Y Y + + +L L + + +L DN+ G Sbjct: 435 AKIALDIGRRQMGPG--YRYTQVNTSIFRILLPLSKNPDVLGIVLSTIEQLIDYDNHRGG 492 Query: 322 LLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 L TL + R+ T++ L +HR+TL YRL +I LTG L N DD LL + ++L Sbjct: 493 DLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNPDDLFLLDLCIKL 552 Query: 382 D 382 Sbjct: 553 W 553 >UniRef50_A6M1H8 Transcriptional regulator, PucR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1H8_CLOB8 Length = 405 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 110/287 (38%), Gaps = 15/287 (5%) Query: 108 VCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAE-ENTPALTEWAQRLGIDLNQPRVV 166 E+ E S + L + + N++ + E + A G +L+ + Sbjct: 116 EVKLVEVSREISNAIILSRIEENSLSHFLSNILFGDGELEGDAIQKAAYFGYNLSGGCCI 175 Query: 167 AIVEVDSGQLGVDSAMAELQQLQNALTTPERNNL----------VAIVSLTEMVVLKPAL 216 ++++D + + ++ + + R + V I+ + V+ Sbjct: 176 CVIDIDGFERYLKLKNLGDEKSISKIKINFRKVVQDILDKHALKVPIIDKDDAVIFFIRS 235 Query: 217 NSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ 276 + K ++ + + V +GN + + +S A+ + K Sbjct: 236 EENCMNRLDKALKEIQ--LATKNRMDGMSVSVGIGNSYKDLKMMKQSLNEAELAIDSAKC 293 Query: 277 RMPESRCYFYQDLMLPVLLDSL-RGDWQANELARPLARLKTMDN-NGLLRRTLAAWFRHN 334 + + Y+D+ + LL S+ N + L + DN + L L + N Sbjct: 294 QGLDDTITRYKDIGIYSLLFSVENRSILQNYFSEVLGPISGADNKDNNLIEILEMYLNEN 353 Query: 335 VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 T++ LF+HRNTL+Y++ +I EL DL NF+D + + +AL + Sbjct: 354 CNITVTAEKLFLHRNTLKYKIKKIEELLNCDLRNFNDCIKVKIALDI 400 >UniRef50_A8SJR4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJR4_9FIRM Length = 514 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 119/313 (38%), Gaps = 14/313 (4%) Query: 82 LRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRLMHLLAQDSRLREELVMNL 139 + + + +G + L L ++ + + A +++ + + ++ + + ++ Sbjct: 192 IFSKNKEIGKLILNIPKIELSEFDKTIIDYALEIALIQIEKEITIVKLKENYLNDFISDI 251 Query: 140 IQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE---LQQLQNALTTP 195 + + L A+ ID++ V I ++D+ + + E L++++ + Sbjct: 252 LSGNIQSKEELLIRAKLFDIDIDGYSSVIIFDIDNYKYSIVQKPLENIKLEEIKRKMFEK 311 Query: 196 ERNNL------VAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 N V ++ +VL NS + V +L +K F V Sbjct: 312 IIQNFELLKSKVLYYKKSDSLVLITKHNSSDNTLLNELEFLVSKLKKIIKSDFNFTFTVG 371 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 +GN I +SY A + +G+ + Y D+ +L + + Sbjct: 372 MGNIQKDIMDINKSYEEALDCIKIGRLLEENDGIFKYDDIEFFKILSTTINSSKTPSFIN 431 Query: 310 PLARLKTMDNNGL--LRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLG 367 + ++ D TL +N TSK F+H NT++YR +ISE+ DL Sbjct: 432 DILKILKYDKEKDTTYFETLNRLIENNWSLKQTSKKQFLHYNTIKYRFEKISEIINKDLN 491 Query: 368 NFDDRLLLYVALQ 380 + + R LL + + Sbjct: 492 DNNTRFLLELGYR 504 >UniRef50_C7D4Q9 Predicted protein n=22 Tax=Enterococcus faecalis RepID=C7D4Q9_ENTFA Length = 556 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 147/400 (36%), Gaps = 27/400 (6%) Query: 13 DIVARTMRIIDTNINVMDARGRIIGSGD----RERIGEL---------HEGALLVLSQGR 59 ++ I + ++D R +I+ D RI + E AL + Sbjct: 155 QLLEVLSAAIQAPVMLLDERFQIMNHFDLPDAPTRITSILNNATLKKQFETALKAQNNEL 214 Query: 60 VVDIDDAVARHLHGVRQGINL---PLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMML 116 ++ + + ++L P++ + + + + + L+ L L Sbjct: 215 LLFYKEPLTVEFSLANHQLSLRILPIKKKNLSLSYLVIWRTTKKLQTIDLLSVEVCAHYL 274 Query: 117 EQSRLMHLLAQ--DSRLREELVMNLIQAEENTPALTEW-AQRLGIDLNQPRVVAIVEVDS 173 + + L +LIQ + P + + L ++ + +V ++ Sbjct: 275 LPQLQLESSENLTTRQKIGALFQDLIQEKNTNPQAWQEFSNYLQLNEKDTFSLLLVAIEQ 334 Query: 174 GQLGVDS--AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 + + M + N + R + A + T ++L Sbjct: 335 LEQLFNPTIQMNSIGHQLNHILEGYRQKITAFPTQTGFILLLENPAQEEATYLAQTTHLA 394 Query: 232 EQLITRM-KEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRM--PESRCYFYQD 288 + L+ ++ K +L F++++G ++ SY+ A+ T + + + Y D Sbjct: 395 KNLLEQLMKLNPKLSFKLAIGPTVKKITNLCDSYKLAQETFHLAQASQELQQRTILNYDD 454 Query: 289 LMLPVL-LDSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALF 345 L L +++L + R + L+ D + L T+ +F+ N T+ ++ Sbjct: 455 LFFYRLMIETLTKQAKQKIYQRLIEPLEKEDQKHESSLLETINTYFQSNKNISLTATNMY 514 Query: 346 IHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 +HRNT+ YRL +I E+ L L D L L +A+ L +++ Sbjct: 515 VHRNTIIYRLKKIEEILHLTLEFPDSSLQLSLAVYLYKQK 554 >UniRef50_B6FKY8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKY8_9CLOT Length = 500 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 144/397 (36%), Gaps = 21/397 (5%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIG-----ELHEGALLVL 55 + + + I ++ + + +A G S + E + E ++ Sbjct: 98 LLNMIDSRESIERIFFLISTMLGNPVGLYNADGTCFFSSNSETQDFRMEKNITEYKPEII 157 Query: 56 SQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMM 115 ++ + + +++ +++ L + E+ V+ EP + L + + Sbjct: 158 TRYQYLCQKRKNTKYVEYIKK---LDIFKRQEMYFVVSEQNEPLGKLDFIALENIIITLQ 214 Query: 116 LEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVD--- 172 R + + R +L ++ + E A LG++ + V +D Sbjct: 215 FSLIRHVIEENLEKRHLRDLEYRMLDGSLSNDEENEVAGMLGLNDAEIYRVVTFRMDAIK 274 Query: 173 SGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVE 232 + + ++ + E + ++ + + + + + + + G + K + Sbjct: 275 NIEKFTNAQIKETEMVEKEIIRYLPREHIFLQTNQIVYIHRETERETGLEFRKKLEKLQQ 334 Query: 233 QLITRMKEYG-QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQR-----MPESRCYFY 286 + + G ++ F + +G TG + S++++K + K + Sbjct: 335 TIQEFLVNRGVEIDFLIGIGKTVTGYHELKESFKSSKIALKYIKVIRRIIGDEDKSVIDS 394 Query: 287 QDLMLP-VLLDSLRG-DWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 + +L+ ++ + + L +L+ D NG L TL + N TS+ Sbjct: 395 TKIGFFNHVLEKMKDINQLQAFIPESLNKLRQHDIQKNGELVDTLECYLNVNQSLKKTSE 454 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVAL 379 +FIH T YRL +I E+T +D N + L + + L Sbjct: 455 LMFIHYRTASYRLQKIIEITNIDFNNPAEVLSVRIGL 491 >UniRef50_UPI0001B580EB regulatory protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B580EB Length = 506 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 130/377 (34%), Gaps = 28/377 (7%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDA 66 +V + T+ V+ A G+ + G A L R+ D Sbjct: 143 SGHGLSALVKAGAEELGTDCLVLSATGQQLAGGPELPAARRAALARRFLRAERLPCQDGP 202 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR--KYGELVCMTAEMMLEQSRLMHL 124 V R G + + + G+P + + + A + LE+SR+ Sbjct: 203 VTLLGAAGRSGHRIA-------SWFLVVDGDPAKWPSARRELALELAALVGLERSRMDEA 255 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAE 184 ++R E L+ ++ + LT G +P EV G G+ + Sbjct: 256 RRIENRAAEPLLRLVLSDDAAPGELTSRLAAAGFAPQEPVTTLSAEVRGGGPGLAQVL-- 313 Query: 185 LQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL 244 ++ L+ + LVA V + D E R+ V + + Sbjct: 314 ---VEELLSATGQPVLVATVEGETFGLFAS-------RDTEALREAVHTIEPALGSA--- 360 Query: 245 RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL-DSLRGDWQ 303 R + L + + A+ + + ++ +LL ++ D + Sbjct: 361 RLTLGLSR-AADAAGLRAGVQEARHARTLAALTPGRATVLSGDEVASHLLLLAAVPEDLR 419 Query: 304 ANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + L + D + L TL A+ H+ TS L +H NTL YR+ RI EL Sbjct: 420 RTFGEKVLGPVLAYDAAHGSELITTLKAFLEHSGSWTQTSATLHLHVNTLRYRITRIGEL 479 Query: 362 TGLDLGNFDDRLLLYVA 378 TG D F DR+ LY+A Sbjct: 480 TGRDPSRFADRVDLYLA 496 >UniRef50_C0WN27 Purine catabolism regulatory protein n=23 Tax=Lactobacillales RepID=C0WN27_LACBU Length = 566 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 147/399 (36%), Gaps = 19/399 (4%) Query: 2 AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLV--LSQGR 59 + ++ +A +I+ ++ +++ + G H + L++ Sbjct: 162 SSLLMNDVTIGRFIAELGNVINAPAILLSPWHKVVSHSN-YFSGSDHPASFYAEQLNEQD 220 Query: 60 VVDIDDAVARHLHGVRQG-----INLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEM 114 I+ L +G I P+++ + + + E A + Sbjct: 221 FDKINKEKTSFLINNLKGEKVQMIGYPVKVGSYFPFHLIILKPEQIPYPISEFAIEQAVL 280 Query: 115 MLEQSRLMHLLAQD--SRLREELVMNLIQAEEN----TPALTEWAQRLGIDLNQPRVVAI 168 +L + Q+ L+ + + L++++ + + + G+ + Sbjct: 281 VLTFMLYKNHKVQEFFDILKSDFLEQLVKSKTDQVNDNRNWIDLGRNYGL-VKSSYYQIA 339 Query: 169 VEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFG--RWDAED 226 + + + M ++ + L + + +K + + + D + Sbjct: 340 LAYCAPNKKSKTQMIYRKEEAEIAKLWLQEQLPIKIKDVAIFKVKNSNETAILFQSDEPN 399 Query: 227 HRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFY 286 + ++ + +K+ + + GN + +I+ S+ AK+T+ KQ Y Sbjct: 400 IKDILQDISQSLKDELGINLTFAFGNPYKSIENISSSFIEAKSTLDEAKQLYDPDIVNHY 459 Query: 287 QDLMLPVLLDSLRGDWQANELARPLARLKTMDNNG--LLRRTLAAWFRHNVQPLATSKAL 344 L L + + + L L + G L++TL + +N + T+ AL Sbjct: 460 HPKGLVGLFEDTNEENIHYFCEKILKELAYPEEAGVKDLKKTLKVYLDYNCEITKTATAL 519 Query: 345 FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 ++HRNT++YR+ + ++ G+ + N + L L +AL+L E Sbjct: 520 YLHRNTIKYRIKQCEKILGMSVKNPQNSLNLRLALELSE 558 >UniRef50_A6TTD4 Transcriptional regulator, CdaR n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD4_ALKMQ Length = 350 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 158/370 (42%), Gaps = 41/370 (11%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGEL-HEGALLVLSQGRVVDIDDAVAR 69 + I+ IIDT IN++D G I S D +IG ++ L+ G +++ + + Sbjct: 6 IKSIIHSLKDIIDTEINLLDENGYIFHSTDTNKIGNYDNQIISFELNDGFLIEKQEYIYC 65 Query: 70 HLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDS 129 + + + + + G E+ +K+ +++ + + Sbjct: 66 SYNSYEEDKCI-----------LSIKGINEDTQKFAKMIGIFL-----------GTDIKN 103 Query: 130 RLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQ 189 R + + +++ + ++ ++ I + ++E ++ M ++++ Sbjct: 104 ISRNDFIKSILLNTISDDSIKNVCEKHHIVTQGQVQIIVIE------ATENLMGTVEEIL 157 Query: 190 NALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVS 249 +AL + E++ +K + + + + L + ++ Sbjct: 158 SALLS------------DEIIRIKSKYFAVIKRITDKNNDFPTFLSETISSELLYEVKIG 205 Query: 250 LGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELAR 309 +G SY+TA+ + +GK +P + Y ++ L +P+++ ++ + + + Sbjct: 206 IGVIVDDVYDWHFSYKTAENFIEIGKVFLPSHKTYSFKSLTIPLMISKIQANDLEEIMKQ 265 Query: 310 PLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNF 369 +K++ +N L T +F++N+ T++ LF+HRNTL YRL++I ++TG DL F Sbjct: 266 FDCNIKSLFSNNELLNTAFIFFKNNLNISDTARDLFVHRNTLIYRLSKIQDITGYDLRIF 325 Query: 370 DDRLLLYVAL 379 +D +L V + Sbjct: 326 EDAILFNVMI 335 >UniRef50_B0G898 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G898_9FIRM Length = 315 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 114/289 (39%), Gaps = 9/289 (3%) Query: 94 LTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWA 153 TG ++ E + + Q R + ++ + ++NL+ ++E A Sbjct: 24 ATGIALDIHIQPEASKEKIDESIRQIRSLCAAYKEKYNKNYFLLNLMTGTAQDCEISERA 83 Query: 154 QRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLK 213 RL I +PR + ++E + ++ L + + V+ ++ +L Sbjct: 84 ARLHIRAVKPRYLFLLE------SSKKMDETVTEVLKQLFPFQEKIYLVPVNEFQLAMLY 137 Query: 214 PALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVV 273 P + +ED +I + +++ + ++ +Y+ + V Sbjct: 138 PVKDG---CTSEDIHDLAHTMIDTLSMEALTHVQIAYSDLIPDLHALPSAYKQTALALRV 194 Query: 274 GKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRH 333 GK E + + L + L+ L + L + + + + +F++ Sbjct: 195 GKLFYSEQSVFPFNKLGIGRLIHELPEKLCEDFLFEIFGGITSEHLDKDTLAAIDKFFQN 254 Query: 334 NVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLD 382 N+ T++ L +HRNTL YRL ++ + TGLDL F+D + +A+ + Sbjct: 255 NLNIAETARQLHMHRNTLIYRLEQVEKRTGLDLRQFEDAMTFKIAIMIL 303 >UniRef50_B8FZU5 Putative transcriptional regulator, PucR family n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FZU5_DESHD Length = 515 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 69/399 (17%), Positives = 139/399 (34%), Gaps = 38/399 (9%) Query: 8 TKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRE----------------RIGELHEGA 51 K Q +V + + ++ + VM+A ++IG + R+ H Sbjct: 122 GKSIQYLVEQMAQFLNNELVVMNAEFKLIGQSNSTIHMCEISGIKQPDSHGRLSTEHVEF 181 Query: 52 LL--VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVC 109 ++ + + + + I + + + + V + + + R Y + Sbjct: 182 FKNDLIYSNVKNMREPFIYEPSIFICRVICMNVFFQDDFVCRVVIAEDRSTFRGYEAGLL 241 Query: 110 MTAEMMLEQSRLMHLLAQD---SRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRV 165 ++ + + D E+ LI E L + G + + P + Sbjct: 242 HFFTSFIQLVYDLAGYSGDIMPREHMVEIFSALISGESIESWRLKNSVSQHGWNYDGPFL 301 Query: 166 VAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAE 225 A + + Q + A ++V + G + Sbjct: 302 CASIMPSDRDYYNRTIPYYCQMINRDFKGC-----CAFEYERKIVCIVNLEYYNGSGECF 356 Query: 226 DHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF 285 + ++ FRV N FT I Y AK ++ +G + P Y Sbjct: 357 NSV--------YLETLRDGYFRVGYSNVFTSIVDIQAHYVQAKISLRIGLDQFPSRWYYK 408 Query: 286 YQDLMLPVLLDSLRGDWQANELARP-LARLKTMD--NNGLLRRTLAAWFRHNVQPLATSK 342 + D++L + L + L P + L + D N+ TL + + + + T+K Sbjct: 409 FSDIVLFYMESKLTEELDGQFLCSPKIIGLDSYDRANSSDYLHTLKVYLDNQMNAVKTAK 468 Query: 343 ALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQL 381 LFIHR T+ RL RI EL G++ + DD L + ++++L Sbjct: 469 DLFIHRATMVNRLERIKELAGINFKDPDDILYIKISIRL 507 >UniRef50_UPI0001B55256 transcriptional regulator, CdaR n=1 Tax=Streptomyces sp. C RepID=UPI0001B55256 Length = 643 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 87/392 (22%), Positives = 148/392 (37%), Gaps = 35/392 (8%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRII-GSGDRERIGE--LHEGALLVLSQ 57 +AG LD + T +D + V D GR + +G+ + E + +GAL L+ Sbjct: 264 LAGLVLDGAGLATLARATADALDGVLQVRDPGGRPLTATGELPGLDEDAVTKGALQALTD 323 Query: 58 GRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLT-GEPENLRKYGELVCMTAEMML 116 R V + + P+ E +GV+ L+ EP L + Sbjct: 324 RRPVRLPGDLWLA----------PVLAGAEDLGVLLLSASEPLAEEDVRLLQLAAQSVAS 373 Query: 117 EQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQPRVVAIVEVDSGQ 175 +A + + +EL+ +L+ + L E +RLGIDL+ P VV + + G+ Sbjct: 374 LMLIQRGTVAAEGPVHDELLADLLDRPHSVDLHLLERTRRLGIDLDGPHVVVVARPEGGE 433 Query: 176 LGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLI 235 LG + + A + R + V +V++ P D ++ Sbjct: 434 LG--------RAVAWASSYAYRMGGLKGVRRGCIVLVLPGT---------DASAAAHRVS 476 Query: 236 TRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 + PG +AR Y A + ++L +L Sbjct: 477 GELSPLLGHAVSTGAAGPTGSPGEVARVYAEAVRCLDALTALDGVGGTASLRELGFLGML 536 Query: 296 DSLRGDWQANELARPLARLKTMDNN--GLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 S D + +A + + D + L RTL A+F P ++AL +H NT+ Sbjct: 537 LSADHD-VESFVAATIGPVLEYDADRLTELTRTLEAYFASGASPTHAAEALHVHPNTVSR 595 Query: 354 RLNRISELTGLDLGNFDDRLLLYVALQLDEER 385 RL+RI EL G D L + +AL+L + R Sbjct: 596 RLDRIGELLGPDWQKPAGALEIQMALRLRKAR 627 >UniRef50_A7B5U0 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=A7B5U0_RUMGN Length = 550 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 139/403 (34%), Gaps = 23/403 (5%) Query: 1 MAGWHLDTKMAQD----IVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLS 56 ++ LD + +D I+ +I + + + S ++ + E + Sbjct: 148 ISNMLLDGENFEDPTKNILFLLSSMIGNPVALYYSNLTCCASTTQDLSDFVFE---KNVE 204 Query: 57 QGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGE--PENLRKYGELVCMTAEM 114 + + + + + + G + +T P + Y L + Sbjct: 205 KYKPDIVTRFEYKKQRKEHTQYITKIHVLGRTEIYLVVTEVNMPLTILDYMALENAVFTL 264 Query: 115 MLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVA---IVEV 171 + + + ++ +L+ L++ A+ L + V + Sbjct: 265 QYSFMGTYAQNQIEKKYQRDIGYSLLNGLLTGDELSKAARMLKLKDTAQYCVVSFHTISS 324 Query: 172 DSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRV 231 +S + E+ ++ + + + +L ++V + + + +++ Sbjct: 325 NSEDYYTKEELEEIGVIEGEIQRLLPDEHI-YRNLNQIVCIHEIKPGETQAGFREEMEKL 383 Query: 232 EQLITR--MKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVG---KQRMPES--RCY 284 Q + + F++ +G+ G G + +S++ +K + + + Sbjct: 384 YQTVQKQIFHRNKTTDFQIGIGSIVNGYGDLKKSFKDSKKIIDYMDMLRYLYGDKNISVA 443 Query: 285 FYQDLMLPVLLDSL-RGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATS 341 + L + + + D + L +L D ++G L TL A+ + + Sbjct: 444 DFSKLGFFQIFEKIKNRDELMEYVPESLVKLYWYDKEHDGELIETLQAYLDCDKSANKAA 503 Query: 342 KALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEE 384 + L+++ TL RL +I +++G+D N + L + + L + Sbjct: 504 EKLYVNYRTLSGRLKKIKDISGIDFKNSAEMLAVRNGIVLFKM 546 >UniRef50_C6L8W8 Putative uncharacterized protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8W8_9FIRM Length = 403 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 51/404 (12%), Positives = 138/404 (34%), Gaps = 37/404 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRE-RIGELHEGAL------- 52 + +D Q IV + ++ + D +I+ D + + E Sbjct: 12 LMKALIDRCGMQHIVDTAAELFGNSVFICDLGYKILCYSDHDATYDDFWEYVKNYNYSIP 71 Query: 53 ----LVLSQG---RVVDIDDAVARHLHGVR-QGINLPLRLEGEIVGVIGLTGEPENL-RK 103 ++ G R+ D+ + + +R ++G + + G + + Sbjct: 72 EQMIQIMRTGDFARIYSTDEPLIGKYSFAEFPFLAARIRDGSHVLGHVCIYGSRRDFCAE 131 Query: 104 YGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTP-ALTEWAQRLGIDLNQ 162 +L+ + +++ + + L+ +L++ L + L + L Sbjct: 132 DNDLLVLLCKVISYEMLYRGISKPYEIPYYTLLADLLEGNLTDEQELQMRLKCLQLHLPP 191 Query: 163 PRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRW 222 + I++ + + ++ L + L + +++ S Sbjct: 192 QMHLVIIDF-----LSSTVQTSIFYIREYLAQNLPDTLSIVYKNQLILL-----TSEAVI 241 Query: 223 DAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESR 282 + K + T +R+ + N +G ++ Y+ A ++ + E R Sbjct: 242 EHHLLEKNLSGYETS------TDYRIGVSNLISGLQNLPVYYQQASDSIRIAGLIKMEGR 295 Query: 283 CYFYQDLMLPVLLDSLRGDWQANELARPL-ARLKTMDN--NGLLRRTLAAWFRHNVQPLA 339 Y++L + LL + + L P+ +++ D + L + Sbjct: 296 LCLYKNLKIYQLLLYAEKEIDLHFLCDPVVLAIRSYDQQYHTEYLNDLIIYLNCGKNINK 355 Query: 340 TSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDE 383 +K +H+N++ YR++++ EL + + L L ++L++ Sbjct: 356 AAKEACVHKNSMYYRISKMEELFSFSFEDEETCLSLQLSLRILR 399 >UniRef50_D2LXZ9 Transcriptional regulator, CdaR n=2 Tax=Bacillus RepID=D2LXZ9_BACS4 Length = 538 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 110/310 (35%), Gaps = 6/310 (1%) Query: 80 LPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREE--LVM 137 LP+ + G+ + + +++ ++ L+ L Q L L ++ ++ +E + Sbjct: 213 LPVLILGKRFAQLVIVTNNKDITEFELLILDRTATALAQHLLRDLYVEEKKMAQESEWLT 272 Query: 138 NLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER 197 + ++ + + L + + L V V +L Sbjct: 273 SWLEGKYSDEVLHDHISFIDPKLVIQGGVVCVCKQMTIAHSRDIDGTYFKLLFRTVLERY 332 Query: 198 NNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQL-ITRMKEYGQLRFRVSLGNYFTG 256 + + V+ E +L + +G Y Sbjct: 333 GFYLFSTEIRHHVIFIIGDKRPADNWKERMMAAFNRLNKDSSGRIRMSNVSIGVGKYVHA 392 Query: 257 PGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLR-GDWQANELARPLARLK 315 + +SY TAK T+++ + E+ YFY DL + ++ + + L + Sbjct: 393 LCDMHKSYETAKETLLLQESLTKENSSYFYDDLHMYRIIALTKKHSNLTEIVNDYLEPVI 452 Query: 316 TMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRL 373 D NG L +TL + N T+K LFI R TL +R++++ L G D + + R+ Sbjct: 453 AYDRKYNGDLLKTLKTYLSCNGSKQETAKKLFIVRQTLYHRIDKLENLLGNDFMSSERRV 512 Query: 374 LLYVALQLDE 383 + L + Sbjct: 513 AIEFMLVAYD 522 >UniRef50_B4BLD3 Transcriptional regulator, PucR family n=3 Tax=Bacillaceae RepID=B4BLD3_9BACI Length = 578 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 135/402 (33%), Gaps = 39/402 (9%) Query: 1 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSG---DRERIGELH----EGALL 53 + L I+ I ++I + D G I S D I EG + Sbjct: 143 LLKLILKDTDLNRILQFVYNHIGSSILMTDRTGMI-QSQINLDPTFIDRWKKYVDEGIIP 201 Query: 54 VLSQGRVVDIDDAVARHLHGVRQG---INLPLR-LEGEIVGVIGLTGEPENLRK------ 103 + + D + +G I LP+ + + G + + + Sbjct: 202 IQKTDSHLTQDPMFHKFRITEIEGRYIIQLPVLEISSDPKGYLFVVLPSHLSIESFLTQY 261 Query: 104 -YGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENT-PALTEWAQRLGIDLN 161 L + L SR + +RLR + V L Q E + A+ LG ++ Sbjct: 262 RINVLEHAATTISLWLSRKNAIEETKTRLRGDFVQELAQGELTSWDQANSKAKLLGYNIK 321 Query: 162 QPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPER--------------NNLVAIVSLT 207 P + + ++ E ++ L R ++ Sbjct: 322 IPYLCIVGVPENFTTLFQKRKHEYDSFEHWLDNMFRYIEEEIFYAAQSLNRQVMMTHQEE 381 Query: 208 EMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTA 267 ++++ A + VE+ + + + +G++ G +SY A Sbjct: 382 QLILFFEASKETKNETPFNFLDLVERRLRNL--VPDVVISWGIGSHQEGLEGFKKSYENA 439 Query: 268 KTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELA-RPLARLKTMDN--NGLLR 324 K + +G+ + Y+ + +L ++ + + E+ + L D+ N L Sbjct: 440 KMALYIGRNKKGPGHRTTYESTRMDRVLLNIAQNDEMKEIIMSTIGPLIEYDHQRNMDLI 499 Query: 325 RTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 T + + + T++ L +HR +L YRL +I LTGL L Sbjct: 500 GTFVTYNQCHGNVSQTARLLNLHRQSLLYRLRKIESLTGLSL 541 >UniRef50_C0C179 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C179_9CLOT Length = 538 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 140/382 (36%), Gaps = 17/382 (4%) Query: 7 DTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALL-VLSQGRVVDIDD 65 + +IV R + + ++D+ + + + +R+ + V+ + + + D+ Sbjct: 150 SKRGTMEIVYRIAEFLKRTVILLDSDFKCVYA--AKRMNDKKLCMKDSVIRRLKSLKNDE 207 Query: 66 AVARHLHGV-RQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 V R+G + + G ++ + + L K + + +L + Sbjct: 208 CVFLFPDKTERKGYTVTIPGAGAN-ALLLVLEDAGELTKEEKSIIERCIKILSMALEQAR 266 Query: 125 LAQDSRL-----REELVMNLIQA--EENTPALTEWAQRLGIDLNQPRVVAIVEVDSG-QL 176 Q+ R + + + + + L + + + + R++ ++++ G Sbjct: 267 SRQEDRYEFEDSYHKDLYEYLNGLRQYDDGELKNILRDIEMPFEKKRIMILLQIQGGFDA 326 Query: 177 GVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLIT 236 G D ++ + +V L + + K + + Sbjct: 327 GTDYRELIQGCIRKCKEMRGFEPYILSRGRKFIVYLFACTDKSDPFMCSAAGKLADIMAE 386 Query: 237 RMKEYG-QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLL 295 RM + ++ +G I R+Y+ A+ + +G++ + + + Y L L Sbjct: 387 RMGRINDGMEVQIGIGKSSDDFPGIKRAYQEAEKAVDIGEKLGMKEQVFAYNQLEFYDYL 446 Query: 296 DSLRGDWQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEY 353 + + + L+ D NN L TL + H T+KAL+IHRNTL Sbjct: 447 LQYPVKTK-EQCCDSIRCLQEYDEENNTELVHTLLGFLEHKFNVSETAKALYIHRNTLIN 505 Query: 354 RLNRISELTGLDLGNFDDRLLL 375 RLN+I EL DL DD + L Sbjct: 506 RLNKIKELLYNDLETMDDLMPL 527 >UniRef50_C1BB10 Putative CdaR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BB10_RHOOB Length = 439 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 78/385 (20%), Positives = 135/385 (35%), Gaps = 21/385 (5%) Query: 14 IVARTMRIIDTNINVMDARGRIIGSGDRE--RIGELHEGALLVLSQGRVVDIDDAVARHL 71 IV + + D +G I+ S E R +V Q D + Sbjct: 35 IVRVCSEATGKAVTLFDRKGHIVASTRPEAARQTAFPPLGDIVRGQPTPTGADPVLIAAE 94 Query: 72 HGV---RQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL--MHLLA 126 G R+ I + GE +G + + +P E V + L + Sbjct: 95 LGTGLSRRKILSAIVERGEHLGWLVVDEQPTPFVPTDEYVTHRCARRIGAQFLTQRRITR 154 Query: 127 QDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV-EVDSGQLGVDSAMAEL 185 R L L++ L A+ LG++++ R + V E + +D +AE Sbjct: 155 VAWNARSNLARQLVRGSGAWADLAAGAEYLGVNVHAHRALVYVREPEGAPDDLDRTLAEY 214 Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLR 245 + L S +++++ +E +T + G Sbjct: 215 TE-----RALGLEVLSTRGSEGILLLIEAPAQVASPTVVRRITATLEAAVTELSPTGG-- 267 Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPES--RCYFYQDLMLPVL-LDSLRGDW 302 + + + P S R+YR A+ + + + R DL L L + Sbjct: 268 LIAGVSSVYE-PDSFVRAYREAREVVRCIDRFTDGTGHRVLAVDDLGPARLFLANGEVSA 326 Query: 303 QANELARPLARLKTMD-NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISEL 361 + + L L D + L RTLA WF N T+ L +H NT+ RL+R+ L Sbjct: 327 IRHFIDDMLGPLLDDDVASAELIRTLAVWFEENRGMRRTATRLGVHENTVRLRLSRVHTL 386 Query: 362 TGLDLG-NFDDRLLLYVALQLDEER 385 TGLD+ + +L ++ AL + R Sbjct: 387 TGLDVTGDATHQLSIHTALLVLRLR 411 >UniRef50_A6CS53 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CS53_9BACI Length = 533 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 133/384 (34%), Gaps = 20/384 (5%) Query: 5 HLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDID 64 L+ ++++ + + + + E++ + + + Sbjct: 151 LLNVNHFKELLDVLYTELGVPVLLKLKDHEL----------EIYPRKRRS-EEKHLQKMY 199 Query: 65 DAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHL 124 + + H + ++ + L + + + +Y L+ L Q + L Sbjct: 200 EGYSNEEHPL--FVSKKVLLFEQEYAELLIYRTDFPFSEYELLLLDRTSTALAQYLMREL 257 Query: 125 LAQDSRLREE--LVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAM 182 + + +E +M ++ E+ L+ + LG + VV I ++ + + Sbjct: 258 YFNEKKRLDESRWLMAWLKGEQTGDKLSSYLSDLGERITGG-VVCICQLQKVKEKEQLDL 316 Query: 183 AELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYG 242 + ++ + ++A ++ + S W E+++ Sbjct: 317 TYFNLIARSIFEQQGYKVLAEKEGDNLIFILLDNRSSKTWKTR-ISDAFEKILETEFFQK 375 Query: 243 QLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGD- 301 + G Y I +SY++A +++ + R +FY DL L L+ ++ + Sbjct: 376 AKDIHFAAGKYQEEIKDIHKSYQSANESLLYRSKDCGSKRFHFYDDLHLYRLISIVQQNM 435 Query: 302 WQANELARPLARLKTMD--NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRIS 359 + L + D + G L TL + T+ LFI R TL +RL +I Sbjct: 436 NLQEMVDEYLEPILKYDKDHAGSLLHTLKVYLGCQGSKQETATRLFIVRQTLYHRLKKID 495 Query: 360 ELTGLDLGNFDDRLLLYVALQLDE 383 EL G D + R+ + L + Sbjct: 496 ELIGEDFMQPEKRVAIEFLLHAHD 519 >UniRef50_A0QWK2 Regulatory protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QWK2_MYCS2 Length = 517 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 142/378 (37%), Gaps = 21/378 (5%) Query: 11 AQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARH 70 A+ I+ R D + V+D GR + GD IG+ + + V + Sbjct: 152 AEGILDVLRRDHDLPLLVVDRLGRRLA-GD---IGD--DEDVQVAADALNRHPPPLEVAL 205 Query: 71 LHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAE--MMLEQSRLMHLLAQD 128 G + L G++ + +L+ A + LE +R L A + Sbjct: 206 PSGDTASVYLVEGAMGDVDAGLFCLRPLPSLKPLERDALDQAARYLSLEVTRQQALQAIE 265 Query: 129 SRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQL 188 SR EL+ ++ + E + GID + V V V G + + E++ Sbjct: 266 SRFSSELLEMVLSGAARARDVAERLRAFGIDPSSALAVYTVVVGDGAVRPPGSTDEIEDF 325 Query: 189 QNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRM-KEYGQLRFR 247 N + P +V S +VV D E L+ + + R Sbjct: 326 FNRHSIP---AVVIPGSQDTVVVF------GWHRDMTALVGLAEDLVQTLTARFPADRAV 376 Query: 248 VSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANE 306 + +G+ ++ A+ T V ++R E + Y D+ +L L Sbjct: 377 IGVGDLAADASALREPLIRARETCHVLRRRTTEPKVGTYADIGTHRMLLGLHDRSVLRRF 436 Query: 307 LARPLARLKTMDN--NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGL 364 L L D L RTL + ++ T+ L++H NTL R+ RISELTG Sbjct: 437 ADDILGPLDQHDEQYGTALVRTLRTFLANDGHWAKTATELYVHVNTLRNRIARISELTGR 496 Query: 365 DLGNFDDRLLLYVALQLD 382 D+ +DR+ L++AL+ D Sbjct: 497 DVARLEDRVDLFLALEAD 514 >UniRef50_D1CBY0 Transcriptional regulator, CdaR n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBY0_THET1 Length = 493 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 143/382 (37%), Gaps = 37/382 (9%) Query: 12 QDIVARTMRIIDTNINVMDARGRIIGSG-----DRERIGELHEGALLVLSQGRVVDIDDA 66 + ++ + ++ + G++I S D + + + + ++ Sbjct: 134 EALIRLLAQSLNMPVACYQIDGQMISSPNFPDIDPPDLNTDWKESTIYTNRSTDTRHSGW 193 Query: 67 VARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELV--CMTAEMMLEQSRLMHL 124 + + + +R + + V+ + + + L A + +E SRL+ Sbjct: 194 IWQ----------IAVRRSNKPIAVLVVLADKPDPTPQEALDIKQTAAAISVELSRLLAA 243 Query: 125 LAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVE-VDSGQLGVDSAMA 183 +RLR EL+ +L + + L A +G+ + +VA++ + ++ Sbjct: 244 EENKARLRSELIRDLFY-KGSVENLAVRADVVGVSIPNNGIVAVIRGIPPETNAMELLRD 302 Query: 184 ELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQ 243 L ++ + L++ + +E+ +L PA +++R Sbjct: 303 LLPRVSSLLSSYP-----ILYEKSEIAMLLPANLRGESTT---------SMLSRGGTINV 348 Query: 244 LRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DW 302 + + + I A+ +V ++ + R ++ L+ L G + Sbjct: 349 PNIAIGISSQVKQISEIPNHLYEARVAALVSEKVY-QGRMVTLEEAKAYGLIAPLAGLEP 407 Query: 303 QANELARPLARLK--TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360 + L L N L TL + N ++ L IHRN+L YRL++I + Sbjct: 408 IKRRVIDILTPLITEAEGNRSELFATLKVYSECNGNLSEAARILHIHRNSLAYRLHKIEQ 467 Query: 361 LTGLDLGNFDDRLLLYVALQLD 382 LTG +L + +DR +L +A+ L Sbjct: 468 LTGRNLDDPEDRFMLAIAVHLY 489 >UniRef50_D2LUM4 Putative transcriptional regulator, PucR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUM4_BACS4 Length = 383 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 115/319 (36%), Gaps = 15/319 (4%) Query: 76 QGINLPLRLEG--EIVGVIGLTGEPENLRKYGELVCMTAEMML--EQSRLMHLLAQDSRL 131 Q PL +G + + I L L +ML E + + + Sbjct: 49 QCFATPLTADGIFDHIPFIACLETNYKLTDVDCLTIEKVSIMLNMELANTNARKKIEQKY 108 Query: 132 REELVMNLIQAEENT-PALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQN 190 + V +L+ E + + L ID + + V E Sbjct: 109 YNQFVKHLLLGEITSISDVETQNSSLDIDFKKKWFQVFI---LNTEQVGGVKEEFYYYLR 165 Query: 191 ALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL--RFRV 248 L+ + L+ + + V + + D + + ++Q R +Y +L F + Sbjct: 166 TLSKVVKGQLLGSILHDQFVFVMIV---DVKSDLQQNTSFIKQETERFFQYKKLVEDFVL 222 Query: 249 SLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG-DWQANEL 307 +G I SY+ A+ VV + R Y DL + LL L G + + Sbjct: 223 CVGESVQHVEEIPLSYKRAEKVKVVQQHFSFTKRLVTYDDLQIFRLLYLLPGSEDVVRYV 282 Query: 308 ARPLARLK-TMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL 366 L L + TL +F+ N T+K LF H NT+ YR+ +I+ L +DL Sbjct: 283 DDILGGLDNEKKRSKDYIETLEVYFKSNRNMRETAKKLFTHYNTVVYRMEKIAALLKIDL 342 Query: 367 GNFDDRLLLYVALQLDEER 385 + + L L +AL++ R Sbjct: 343 EDSEAVLELEIALKIRRLR 361 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.150 0.394 Lambda K H 0.267 0.0461 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,956,024,163 Number of Sequences: 3077464 Number of extensions: 83485308 Number of successful extensions: 288914 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2347 Number of HSP's successfully gapped in prelim test: 1439 Number of HSP's that attempted gapping in prelim test: 283143 Number of HSP's gapped (non-prelim): 4338 length of query: 385 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 255 effective length of database: 640,326,036 effective search space: 163283139180 effective search space used: 163283139180 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.6 bits)