Email l.a.kelley@imperial.ac.uk Description P23865 Date Thu Jan 5 11:40:05 GMT 2012 Unique Job ID b39bc56f4c0c53fa

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1fc9A_ 100.0 27 PDB header:hydrolase Chain: A: PDB Molecule:photosystem ii d1 protease; PDBTitle: photosystem ii d1 c-terminal processing protease 2 c3k50A_ 100.0 15 PDB header:hydrolase Chain: A: PDB Molecule:putative s41 protease; PDBTitle: crystal structure of putative s41 protease (yp_211611.1) from2 bacteroides fragilis nctc 9343 at 2.00 a resolution 3 c1k32E_ 100.0 15 PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease 4 c1n6dE_ 100.0 15 PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative 5 d1fc6a4 100.0 28 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain 6 c3djaA_ 100.0 22 PDB header:transferase Chain: A: PDB Molecule:protein ct_858; PDBTitle: crystal structure of cpaf solved with mad 7 d1j7xa_ 100.0 24 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain 8 d1k32a4 100.0 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain 9 c3shwA_ 99.7 12 PDB header:cell adhesion Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of zo-1 pdz3-sh3-guk supramodule complex with2 connexin-45 peptide 10 d1fc6a3 99.6 35 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Tail specific protease PDZ domain 11 d1wifa_ 99.3 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 12 c2edzA_ 99.1 25 PDB header:signaling protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: solution structures of the pdz domain of mus musculus pdz2 domain-containing protein 1 13 c2krgA_ 99.1 31 PDB header:signaling protein Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358) 14 d1w9ea1 99.1 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 15 c3k1rA_ 99.1 25 PDB header:structural protein Chain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 16 d2z9ia1 99.1 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 17 c2qktB_ 99.1 20 PDB header:peptide binding protein Chain: B: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: crystal structure of the 5th pdz domain of inad 18 d1qaua_ 99.0 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 19 c2komA_ 99.0 19 PDB header:signaling protein Chain: A: PDB Molecule:partitioning defective 3 homolog; PDBTitle: solution structure of humar par-3b pdz2 (residues 451-549) 20 d1ueqa_ 99.0 33 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 21 c3eggC_ not modelled 99.0 26 PDB header:hydrolase Chain: C: PDB Molecule:spinophilin; PDBTitle: crystal structure of a complex between protein phosphatase 1 alpha2 (pp1) and the pp1 binding and pdz domains of spinophilin 22 c2kjdA_ not modelled 99.0 31 PDB header:signaling protein Chain: A: PDB Molecule:sodium/hydrogen exchange regulatory cofactor nhe- PDBTitle: solution structure of extended pdz2 domain from nherf1 (150-2 270) 23 c3diwB_ not modelled 99.0 25 PDB header:signaling protein/cell adhesion Chain: B: PDB Molecule:tax1-binding protein 3; PDBTitle: c-terminal beta-catenin bound tip-1 structure 24 c2e7kA_ not modelled 99.0 28 PDB header:membrane protein Chain: A: PDB Molecule:maguk p55 subfamily member 2; PDBTitle: solution structure of the pdz domain from human maguk p552 subfamily member 2 25 c2vsvB_ not modelled 99.0 21 PDB header:protein-binding Chain: B: PDB Molecule:rhophilin-2; PDBTitle: crystal structure of the pdz domain of human rhophilin-2 26 c2eaqA_ not modelled 99.0 17 PDB header:metal binding protein Chain: A: PDB Molecule:lim domain only protein 7; PDBTitle: crystal structure of pdz domain of kiaa0858 (lim), ms07932 from homo sapiens 27 d1wg6a_ not modelled 98.9 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 28 d1d5ga_ not modelled 98.9 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 29 d1t2ma1 not modelled 98.9 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 30 d2fe5a1 not modelled 98.9 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 31 c3l4fD_ not modelled 98.9 21 PDB header:signaling protein/protein binding Chain: D: PDB Molecule:sh3 and multiple ankyrin repeat domains protein PDBTitle: crystal structure of betapix coiled-coil domain and shank2 pdz complex 32 c3ggeA_ not modelled 98.9 25 PDB header:protein binding Chain: A: PDB Molecule:pdz domain-containing protein gipc2; PDBTitle: crystal structure of the pdz domain of pdz domain-containing protein2 gipc2 33 c2v90E_ not modelled 98.9 29 PDB header:protein-binding Chain: E: PDB Molecule:pdz domain-containing protein 3; PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3) 34 d1va8a1 not modelled 98.9 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 35 c1w9qB_ not modelled 98.9 22 PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the pdz tandem of human syntenin in2 complex with tnefaf peptide 36 c2jikB_ not modelled 98.9 26 PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein 37 c2he4A_ not modelled 98.9 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2; PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif 38 c2jilA_ not modelled 98.9 25 PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) 39 d2byga1 not modelled 98.9 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 40 c2xkxB_ not modelled 98.9 29 PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain 41 c2d92A_ not modelled 98.9 25 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the fifth pdz domain of inad-like2 protein 42 c2omjA_ not modelled 98.9 30 PDB header:cell adhesion Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 12; PDBTitle: solution structure of larg pdz domain 43 d1x5qa1 not modelled 98.9 29 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 44 d1ry4a_ not modelled 98.9 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 45 d1nf3c_ not modelled 98.9 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 46 c2vwrA_ not modelled 98.9 26 PDB header:protein-binding Chain: A: PDB Molecule:ligand of numb protein x 2; PDBTitle: crystal structure of the second pdz domain of numb-binding2 protein 2 47 d1wf8a1 not modelled 98.9 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 48 d1g9oa_ not modelled 98.9 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 49 c2ogpA_ not modelled 98.9 22 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of the second pdz domain of par-3 50 d1ozia_ not modelled 98.9 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 51 d2fcfa1 not modelled 98.9 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 52 c2iwnA_ not modelled 98.9 21 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 3rd pdz domain of multiple pdz domain protein mpdz (casp2 target) 53 c2i04B_ not modelled 98.9 34 PDB header:peptide binding protein Chain: B: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: x-ray crystal structure of magi-1 pdz1 bound to the c-2 terminal peptide of hpv18 e6 54 c3khfA_ not modelled 98.9 29 PDB header:transferase Chain: A: PDB Molecule:microtubule-associated serine/threonine-protein PDBTitle: the crystal structure of the pdz domain of human microtubule2 associated serine/threonine kinase 3 (mast3) 55 d1um1a_ not modelled 98.9 28 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 56 c2dm8A_ not modelled 98.9 21 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the eighth pdz domain of human inad-2 like protein 57 c2ejyA_ not modelled 98.9 22 PDB header:membrane protein Chain: A: PDB Molecule:55 kda erythrocyte membrane protein; PDBTitle: solution structure of the p55 pdz t85c domain complexed2 with the glycophorin c f127c peptide 58 c3qikA_ not modelled 98.9 22 PDB header:hydrolase regulator Chain: A: PDB Molecule:phosphatidylinositol 3,4,5-trisphosphate-dependent rac PDBTitle: crystal structure of the first pdz domain of prex1 59 c2dluA_ not modelled 98.9 26 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the second pdz domain of human inad-2 like protein 60 c2dmzA_ not modelled 98.9 21 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the third pdz domain of human inad-2 like protein 61 c2k1zA_ not modelled 98.9 21 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of par-3 pdz3 62 c2iwoA_ not modelled 98.9 24 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 12th pdz domain of multiple pdz domain protein mpdz (casp2 target) 63 d1whaa_ not modelled 98.9 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 64 c1z87A_ not modelled 98.8 27 PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin 65 c3shuB_ not modelled 98.8 26 PDB header:cell adhesion Chain: B: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of zo-1 pdz3 66 d1uhpa_ not modelled 98.8 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 67 d1n7ea_ not modelled 98.8 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 68 c2jreA_ not modelled 98.8 29 PDB header:de novo protein Chain: A: PDB Molecule:c60-1 pdz domain peptide; PDBTitle: c60-1, a pdz domain designed using statistical coupling2 analysis 69 c2jxoA_ not modelled 98.8 29 PDB header:protein binding Chain: A: PDB Molecule:ezrin-radixin-moesin-binding phosphoprotein 50; PDBTitle: structure of the second pdz domain of nherf-1 70 d1qlca_ not modelled 98.8 28 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 71 d2f5ya1 not modelled 98.8 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 72 c2yt7A_ not modelled 98.8 28 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3 73 c2djtA_ not modelled 98.8 21 PDB header:signaling protein Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structures of the pdz domain of human unnamed2 protein product 74 c2dazA_ not modelled 98.8 25 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the 7th pdz domain of inad-like2 protein 75 d1be9a_ not modelled 98.8 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 76 d1ihja_ not modelled 98.8 31 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 77 d1kwaa_ not modelled 98.8 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 78 c2egkC_ not modelled 98.8 27 PDB header:protein binding Chain: C: PDB Molecule:general receptor for phosphoinositides 1- PDBTitle: crystal structure of tamalin pdz-intrinsic ligand fusion2 protein 79 c1u38A_ not modelled 98.8 32 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 80 d1pdra_ not modelled 98.8 29 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 81 d2f0aa1 not modelled 98.8 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 82 d1p1da2 not modelled 98.8 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 83 d1whda_ not modelled 98.8 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 84 d1rzxa_ not modelled 98.8 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 85 c1u37A_ not modelled 98.8 32 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 86 c2gzvA_ not modelled 98.8 24 PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) 87 d1uf1a_ not modelled 98.8 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 88 c2opgB_ not modelled 98.8 21 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 10th pdz domain of mpdz 89 d1tp5a1 not modelled 98.8 28 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 90 d1m5za_ not modelled 98.8 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 91 d1wi4a1 not modelled 98.8 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 92 c2dkrA_ not modelled 98.8 23 PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b 93 d1v6ba_ not modelled 98.8 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 94 c3hpmA_ not modelled 98.8 20 PDB header:protein binding Chain: A: PDB Molecule:protein interacting with prkca 1; PDBTitle: oxidized dimeric pick1 pdz c46g mutant in complex with the carboxyl2 tail peptide of glur2 95 c2q3gA_ not modelled 98.8 22 PDB header:structural genomics Chain: A: PDB Molecule:pdz and lim domain protein 7; PDBTitle: structure of the pdz domain of human pdlim7 bound to a c-2 terminal extension from human beta-tropomyosin 96 d1v62a_ not modelled 98.8 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 97 c2eehA_ not modelled 98.8 17 PDB header:metal binding protein Chain: A: PDB Molecule:pdz domain-containing protein 7; PDBTitle: solution structure of first pdz domain of pdz domain2 containing protein 7 98 d1rgra_ not modelled 98.8 32 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 99 c2v1wB_ not modelled 98.8 22 PDB header:structural protein Chain: B: PDB Molecule:pdz and lim domain protein 4; PDBTitle: crystal structure of human lim protein ril (pdlim4) pdz2 domain bound to the c-terminal peptide of human alpha-3 actinin-1 100 d1qava_ not modelled 98.8 28 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 101 d1i16a_ not modelled 98.8 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Interleukin 16 102 d2cssa1 not modelled 98.8 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 103 c2fneB_ not modelled 98.8 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 13th pdz domain of mpdz 104 d1ujda_ not modelled 98.8 13 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 105 c3o46A_ not modelled 98.8 20 PDB header:protein binding Chain: A: PDB Molecule:maguk p55 subfamily member 7; PDBTitle: crystal structure of the pdz domain of mpp7 106 d1q3oa_ not modelled 98.8 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 107 d1q7xa_ not modelled 98.8 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 108 d1vaea_ not modelled 98.8 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 109 c3qglD_ not modelled 98.7 26 PDB header:protein binding Chain: D: PDB Molecule:sorting nexin-27; PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3 110 d1wfga_ not modelled 98.7 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 111 c3b76A_ not modelled 98.7 25 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor 112 d1zoka1 not modelled 98.7 31 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 113 c2ehrA_ not modelled 98.7 26 PDB header:structural protein Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the sixth pdz domain of human inad-2 like protein 114 c2qg1A_ not modelled 98.7 28 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: crystal structure of the 11th pdz domain of mpdz (mupp1) 115 c2p3wB_ not modelled 98.7 22 PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) 116 d1rgwa_ not modelled 98.7 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 117 c2ka9A_ not modelled 98.7 25 PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide 118 d1lcya1 not modelled 98.7 28 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 119 d1p1da1 not modelled 98.7 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 120 d1u3ba2 not modelled 98.7 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain