Phyre 2 alignment of P37677 with c2ftcA_

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Job Description | P37677
Confidence | 20.18% | Date | Thu Jan 5 11:56:51 GMT 2012
Rank | 229 | Aligned Residues | 50
% Identity | 14% | Template | c2ftcA_
PDB info | PDB header:ribosome | Chain: A: PDB Molecule:mitochondrial ribosomal protein l1; | PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
Resolution | 12.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |  | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | W | A | E | R | D | M | A | E | L | W | Q | C | C | M | A | V | I | R | A | L | L | T | H | S | G | V | S | G | E | Q | . | I | V | G | I | G | I | S | A | Q | G | K | G | L | F | L | L | D | K | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | T | L | D | M | S | S | D | Q | I | A | A | N | L | Q | A | V | I | N | E | V | C | R | H | R | P | L | N | L | G | P | F | V | V | R | A | F | L | R | S | S | T | S | E | G | L | L | L | K | I | D
Template Known Secondary structure |  |  |  | S | S |  |  | S |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T |  |  |  | S |  |  |  | S |  | S |  |  |  |  |  | B |  |  |  | S | S | S |  |  | B |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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