16/01/2012 14:48:18 : INFO  : Run start: Mon Jan 16 14:48:18 GMT 2012
16/01/2012 14:48:18 : INFO  : Initialised job
16/01/2012 14:48:18 : INFO  : Renaming log file 'phyre2_20120116_144818.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/phyre_20120116_144818.log'
16/01/2012 14:48:18 : INFO  : Initialised job:
Sequence
>batch____
MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIR
ALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPE
KLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISE
SNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGG
LFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEA
SPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQ
AIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLR
IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQ
HLIAALQGFHARIKEHTL

16/01/2012 14:48:18 : INFO  : Checked sequence
16/01/2012 14:48:18 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 14:48:18 : INFO  : PSI-BLAST 3 iterations
16/01/2012 14:52:02 : INFO  : PSI-BLAST 5 iterations
16/01/2012 14:55:17 : INFO  : Finished PSI-BLAST
16/01/2012 14:55:17 : INFO  : Running Buildali to generate a3m file
16/01/2012 15:12:39 : INFO  : Converting to HMM
16/01/2012 15:12:45 : INFO  : Calibrating HMM
16/01/2012 15:12:58 : INFO  : Searching HMM database
16/01/2012 15:22:40 : INFO  : Finished buildali
16/01/2012 15:22:40 : INFO  : Predicting secondary structure
16/01/2012 15:22:40 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 15:22:40 : INFO  : Predicting Disordered regions
16/01/2012 15:22:40 : INFO  : Predicted Disorder (Disopred)
16/01/2012 15:22:40 : INFO  : Running memsat_svm check
16/01/2012 15:25:32 : INFO  : Running memsat_svm full
16/01/2012 15:32:04 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b382c73283566313'
16/01/2012 15:32:04 : INFO  : Initialising fold library search
16/01/2012 15:32:04 : INFO  : Initialised search input
16/01/2012 15:32:04 : INFO  : Building Ensemble models
16/01/2012 15:32:04 : INFO  : Building hh.c3ifrB_.model.1.pdb
16/01/2012 15:32:05 : INFO  : Building hh.c3gbtA_.model.2.pdb
16/01/2012 15:32:05 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/hh.c3gbtA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/c3gbtA_.1.pdb
16/01/2012 15:32:05 : INFO  : Building hh.c3flcX_.model.3.pdb
16/01/2012 15:32:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/hh.c3flcX_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/c3flcX_.3.pdb
16/01/2012 15:32:06 : INFO  : Building hh.c2zf5O_.model.4.pdb
16/01/2012 15:32:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/hh.c2zf5O_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/c2zf5O_.4.pdb
16/01/2012 15:32:06 : INFO  : Building hh.c2nlxA_.model.5.pdb
16/01/2012 15:32:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/hh.c2nlxA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/c2nlxA_.5.pdb
16/01/2012 15:32:07 : INFO  : Building hh.c2d4wA_.model.6.pdb
16/01/2012 15:32:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/hh.c2d4wA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b382c73283566313/c2d4wA_.6.pdb
16/01/2012 15:32:07 : INFO  : Building c3gbtA_.1.pdb
16/01/2012 15:32:08 : INFO  : Building c3ifrB_.2.pdb
16/01/2012 15:32:08 : INFO  : Building c3flcX_.3.pdb
16/01/2012 15:32:08 : INFO  : Building c2zf5O_.4.pdb
16/01/2012 15:32:09 : INFO  : Building c2nlxA_.5.pdb
16/01/2012 15:32:09 : INFO  : Building c2d4wA_.6.pdb
16/01/2012 15:32:10 : INFO  : Building c3jvpA_.7.pdb
16/01/2012 15:32:10 : INFO  : Building c3gg4B_.8.pdb
16/01/2012 15:32:11 : INFO  : Building c3hz6A_.9.pdb
16/01/2012 15:32:11 : INFO  : Building c3g25B_.10.pdb
16/01/2012 15:32:12 : INFO  : Building c2w40C_.11.pdb
16/01/2012 15:32:13 : INFO  : Building c1glbG_.12.pdb
16/01/2012 15:32:13 : INFO  : Building c2dpnB_.13.pdb
16/01/2012 15:32:13 : INFO  : Building c3ezwD_.14.pdb
16/01/2012 15:32:14 : INFO  : Building c1xupO_.15.pdb
16/01/2012 15:32:15 : INFO  : Building c3i8bA_.16.pdb
16/01/2012 15:32:15 : INFO  : Building c2cgkB_.17.pdb
16/01/2012 15:32:15 : INFO  : Building c3h6eB_.18.pdb
16/01/2012 15:32:16 : INFO  : Building d2p3ra1.19.pdb
16/01/2012 15:32:17 : INFO  : Building d1r59o1.20.pdb
16/01/2012 15:32:35 : INFO  : Finished HH model building
16/01/2012 15:32:35 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 15:32:47 : INFO  : html domain output complete ID 'b382c73283566313'
16/01/2012 21:23:02 : INFO  : Run end  : Mon Jan 16 21:23:02 GMT 2012
