BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (408 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria R... 844 0.0 UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 338 1e-91 UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria... 270 7e-71 UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 247 6e-64 UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 241 4e-62 UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepI... 224 6e-57 UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 222 2e-56 UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteob... 222 2e-56 UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP... 215 2e-54 UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepaci... 206 2e-51 UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 196 2e-48 UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans ... 171 3e-41 UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alasken... 171 6e-41 UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acineto... 166 2e-39 UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepI... 162 2e-38 UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=ma... 123 1e-26 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 122 3e-26 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 119 3e-25 UniRef50_B8D253 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 114 4e-24 UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 113 1e-23 UniRef50_A3Y4T8 Signal transduction protein containing a membran... 112 3e-23 UniRef50_A6UJV0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Si... 112 3e-23 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 110 8e-23 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 110 8e-23 UniRef50_B9Z5V5 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 110 9e-23 UniRef50_B6AQD1 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 110 1e-22 UniRef50_C1A983 Putative response regulator n=1 Tax=Gemmatimonas... 109 2e-22 UniRef50_A6D546 Hypothetical 918 kDa protein Y4LL n=1 Tax=Vibrio... 108 4e-22 UniRef50_B8KJL8 Response regulator/sensory box/ggdef domain/eal ... 108 5e-22 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 108 5e-22 UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 107 5e-22 UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 107 6e-22 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 107 6e-22 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 107 7e-22 UniRef50_A1TSZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 107 9e-22 UniRef50_B7UY89 Putative uncharacterized protein n=7 Tax=Pseudom... 107 1e-21 UniRef50_A6W8F9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 107 1e-21 UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 106 1e-21 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 106 1e-21 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 106 2e-21 UniRef50_Q3A5U6 Response regulator receiver modulated diguanylat... 105 2e-21 UniRef50_A5FVT2 Periplasmic sensor diguanylate cyclase/phosphodi... 105 2e-21 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 105 2e-21 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 105 3e-21 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 105 3e-21 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 105 4e-21 UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors... 105 4e-21 UniRef50_A6W8M5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 104 5e-21 UniRef50_A5UVR9 Response regulator receiver modulated diguanylat... 104 5e-21 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 104 5e-21 UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 103 8e-21 UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/P... 103 9e-21 UniRef50_A0KQV8 Gaf domain/GGDEF domain/eal domain protein n=2 T... 103 9e-21 UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 103 1e-20 UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 103 1e-20 UniRef50_A8VV29 Signal transduction protein containing a membran... 103 1e-20 UniRef50_B8KDQ1 Ggdef family protein n=1 Tax=Vibrio parahaemolyt... 103 2e-20 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 2e-20 UniRef50_Q1ZFH2 Regulatory component of sensory transduction sys... 102 2e-20 UniRef50_Q88GL0 Sensory box protein n=1 Tax=Pseudomonas putida K... 102 2e-20 UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 102 2e-20 UniRef50_C4KCR0 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T Rep... 102 2e-20 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 2e-20 UniRef50_A3YEE1 Response regulator n=1 Tax=Marinomonas sp. MED12... 102 3e-20 UniRef50_D1CIZ8 Diguanylate cyclase n=1 Tax=Thermobaculum terren... 102 3e-20 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 3e-20 UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 3e-20 UniRef50_Q3SP91 Diguanylate cyclase/phosphodiesterase n=13 Tax=B... 102 4e-20 UniRef50_C0GSA0 Response regulator receiver modulated diguanylat... 101 4e-20 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 101 5e-20 UniRef50_A8ZW17 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 101 5e-20 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 101 5e-20 UniRef50_B2JQP4 Diguanylate cyclase n=2 Tax=Burkholderia RepID=B... 101 5e-20 UniRef50_A3V376 Putative uncharacterized protein n=1 Tax=Loktane... 101 5e-20 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 101 5e-20 UniRef50_C6HW67 Putative diguanylate cyclase/phosphodiesterase n... 101 6e-20 UniRef50_C8W1N2 Diguanylate cyclase n=1 Tax=Desulfotomaculum ace... 101 6e-20 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 100 8e-20 UniRef50_D1C5F0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 100 8e-20 UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (... 100 9e-20 UniRef50_Q21CJ3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodo... 100 9e-20 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 100 9e-20 UniRef50_Q72F59 Sensory box/GGDEF domain protein n=3 Tax=Desulfo... 100 9e-20 UniRef50_A1TB70 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 100 1e-19 UniRef50_A6AUF3 Sensory box/ggdef family protein n=3 Tax=Vibrio ... 100 1e-19 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 100 1e-19 UniRef50_B1YIG1 Diguanylate cyclase n=1 Tax=Exiguobacterium sibi... 100 1e-19 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 100 1e-19 UniRef50_Q7P1K5 Putative uncharacterized protein n=1 Tax=Chromob... 100 1e-19 UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 100 1e-19 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 100 1e-19 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 100 2e-19 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 100 2e-19 UniRef50_A4FNF9 Diguanylate cyclase/phosphodiesterase with PAS/P... 100 2e-19 UniRef50_A4VN31 Sensory box protein n=3 Tax=Proteobacteria RepID... 100 2e-19 UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL d... 100 2e-19 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 100 2e-19 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 99 2e-19 UniRef50_A8G0F6 Diguanylate cyclase/phosphodiesterase n=9 Tax=Sh... 99 2e-19 UniRef50_D0I965 GGDEF family protein n=1 Tax=Grimontia hollisae ... 99 2e-19 UniRef50_A3Y765 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 99 2e-19 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 99 2e-19 UniRef50_B0C776 Diguanylate cyclase/phosphodiesterase with EAL a... 99 2e-19 UniRef50_B5YAD1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=... 99 2e-19 UniRef50_B7DUZ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 99 3e-19 UniRef50_Q15PZ1 Response regulator receiver modulated diguanylat... 99 3e-19 UniRef50_A6WG69 Diguanylate cyclase n=1 Tax=Kineococcus radiotol... 99 3e-19 UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 3e-19 UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 3e-19 UniRef50_C6HZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 3e-19 UniRef50_C6AT15 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 3e-19 UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri... 99 3e-19 UniRef50_C0QBD5 GGDEF domain family protein n=1 Tax=Desulfobacte... 99 3e-19 UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=... 99 3e-19 UniRef50_B1Y5M3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 99 3e-19 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 99 3e-19 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 3e-19 UniRef50_Q1QUF0 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 4e-19 UniRef50_C9QE65 GGDEF family protein n=2 Tax=Vibrio RepID=C9QE65... 99 4e-19 UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 99 4e-19 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 99 4e-19 UniRef50_A1WTB0 Diguanylate cyclase n=1 Tax=Halorhodospira halop... 99 4e-19 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 99 4e-19 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 98 4e-19 UniRef50_Q89G51 Bll6496 protein n=3 Tax=cellular organisms RepID... 98 4e-19 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 98 4e-19 UniRef50_Q1N132 Putative uncharacterized protein n=1 Tax=Bermane... 98 5e-19 UniRef50_A8M1C9 Diguanylate cyclase n=2 Tax=Salinispora RepID=A8... 98 5e-19 UniRef50_A5F8F8 GGDEF family protein n=28 Tax=Vibrio RepID=A5F8F... 98 5e-19 UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 98 5e-19 UniRef50_C3JNF1 Sensory box/ggdef family protein n=2 Tax=Rhodoco... 98 5e-19 UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 98 5e-19 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 98 5e-19 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 98 5e-19 UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (... 98 5e-19 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 98 6e-19 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 98 6e-19 UniRef50_A4FEQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 98 6e-19 UniRef50_B1ZF36 Diguanylate cyclase n=1 Tax=Methylobacterium pop... 98 6e-19 UniRef50_C7RLE3 Periplasmic/7TM domain sensor diguanylate cyclas... 98 6e-19 UniRef50_A0NVC0 Signal transduction protein n=1 Tax=Labrenzia ag... 98 6e-19 UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodi... 98 6e-19 UniRef50_Q1H3Y8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methy... 98 7e-19 UniRef50_C1CWU1 Putative c-di-GMP phosphodiesterase A n=1 Tax=De... 98 7e-19 UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 98 7e-19 UniRef50_Q46NC3 PAS:GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepI... 98 7e-19 UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL d... 97 7e-19 UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 7e-19 UniRef50_UPI0001AEC71A response regulator receiver modulated dig... 97 8e-19 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 97 8e-19 UniRef50_B5HDY0 Integral membrane phosphodiesterase n=15 Tax=Str... 97 8e-19 UniRef50_UPI0001C32105 diguanylate cyclase/phosphodiesterase n=1... 97 9e-19 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 97 9e-19 UniRef50_Q0F0W1 Two-component response regulator n=1 Tax=Maripro... 97 9e-19 UniRef50_C0GT21 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 97 9e-19 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 97 9e-19 UniRef50_Q7MJY0 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 97 9e-19 UniRef50_A6T0I9 Sensory box/GGDEF family protein n=1 Tax=Janthin... 97 1e-18 UniRef50_A0K1H4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 97 1e-18 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 97 1e-18 UniRef50_B8HN37 Response regulator receiver modulated diguanylat... 97 1e-18 UniRef50_Q1NE60 Sensory box/GGDEF family protein n=1 Tax=Sphingo... 97 1e-18 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 1e-18 UniRef50_C6B0E8 Diguanylate cyclase/phosphodiesterase n=9 Tax=Rh... 97 1e-18 UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinom... 97 1e-18 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 97 1e-18 UniRef50_Q97LD1 Signal transduction protein containing diguanyla... 97 1e-18 UniRef50_A9BT74 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID... 97 1e-18 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 1e-18 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 1e-18 UniRef50_A5W576 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=... 97 1e-18 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 97 1e-18 UniRef50_B5GVH8 Phosphodiesterase n=5 Tax=Streptomyces RepID=B5G... 97 1e-18 UniRef50_A8L7Z7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Fr... 97 1e-18 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 97 1e-18 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 2e-18 UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 2e-18 UniRef50_Q8YY40 Two-component response regulator n=3 Tax=Nostoca... 97 2e-18 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 97 2e-18 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 2e-18 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 97 2e-18 UniRef50_A3JAE8 Predicted signal transduction protein containing... 97 2e-18 UniRef50_A4XPH3 Periplasmic/7TM domain sensor diguanylate cyclas... 96 2e-18 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 2e-18 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 2e-18 UniRef50_A5N771 Predicted signal transduction protein containing... 96 2e-18 UniRef50_A5P839 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 2e-18 UniRef50_D2UCH8 Hypothetical two-component system sensor protein... 96 2e-18 UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elon... 96 2e-18 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 2e-18 UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=ce... 96 2e-18 UniRef50_B1HXA7 Inner membrane protein n=2 Tax=Bacillaceae RepID... 96 2e-18 UniRef50_C6QMV9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 2e-18 UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cere... 96 2e-18 UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopi... 96 2e-18 UniRef50_A1SUA4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 96 2e-18 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 96 2e-18 UniRef50_C6HUQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 2e-18 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 3e-18 UniRef50_B0TPL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 3e-18 UniRef50_B5GGZ7 Phosphodiesterase n=11 Tax=cellular organisms Re... 96 3e-18 UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 68... 96 3e-18 UniRef50_C7RJK9 Diguanylate cyclase n=1 Tax=Candidatus Accumulib... 96 3e-18 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 96 3e-18 UniRef50_Q2RTU2 Guanylate cyclase (GGDEF domain) with PAS/PAC se... 96 3e-18 UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors... 96 3e-18 UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GA... 96 3e-18 UniRef50_A1W561 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 96 3e-18 UniRef50_B8HRL0 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 3e-18 UniRef50_D2M1Z6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 3e-18 UniRef50_Q470T2 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 3e-18 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 96 3e-18 UniRef50_A4XQX9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 3e-18 UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=ce... 96 3e-18 UniRef50_A9L0X2 Diguanylate cyclase with PAS/PAC sensor n=7 Tax=... 96 3e-18 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 96 3e-18 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 96 3e-18 UniRef50_A3QDF4 Diguanylate cyclase n=1 Tax=Shewanella loihica P... 96 3e-18 UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclass... 96 3e-18 UniRef50_B5W389 Diguanylate cyclase with PAS/PAC and Chase2 sens... 96 3e-18 UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elon... 96 3e-18 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 96 3e-18 UniRef50_C5RHS3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 3e-18 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 4e-18 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 95 4e-18 UniRef50_C5ALJ3 Putative uncharacterized protein n=1 Tax=Burkhol... 95 4e-18 UniRef50_A0KMH1 PAS:GGDEF domain protein n=2 Tax=Aeromonas RepID... 95 4e-18 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 95 4e-18 UniRef50_Q1K4A3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 95 4e-18 UniRef50_B4WG98 GGDEF domain protein n=1 Tax=Synechococcus sp. P... 95 4e-18 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 95 4e-18 UniRef50_Q2SF23 Predicted signal transduction protein containing... 95 4e-18 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 95 5e-18 UniRef50_Q2SK85 Predicted signal transduction protein containing... 95 5e-18 UniRef50_B9QW37 GGDEF domain protein n=2 Tax=Labrenzia RepID=B9Q... 95 5e-18 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 95 5e-18 UniRef50_Q1PVH4 Conserved hypothetical response regulator protei... 95 5e-18 UniRef50_A1K9H7 GGDEF/PAS/PAC-domain containing protein n=1 Tax=... 95 5e-18 UniRef50_B0TJQ1 Diguanylate cyclase/phosphodiesterase with GAF s... 95 6e-18 UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 95 6e-18 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 95 6e-18 UniRef50_C1A7G0 Putative signaling protein n=1 Tax=Gemmatimonas ... 95 6e-18 UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 94 6e-18 UniRef50_C7HYH8 Diguanylate cyclase with GAF sensor n=1 Tax=Thio... 94 6e-18 UniRef50_A4X4M8 Diguanylate cyclase/phosphodiesterase with PAS/P... 94 6e-18 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 94 6e-18 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 94 6e-18 UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 94 6e-18 UniRef50_B1M2P8 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 94 7e-18 UniRef50_A4TY04 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 94 7e-18 >UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria RepID=YFIN_ECOLI Length = 408 Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/408 (100%), Positives = 408/408 (100%) Query: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM Sbjct: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 Query: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI Sbjct: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 Query: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH Sbjct: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA Sbjct: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA Sbjct: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD Sbjct: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR Sbjct: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 >UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBF5_DICDC Length = 423 Score = 338 bits (868), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 177/388 (45%), Positives = 254/388 (65%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 TF++AL I+M + ITM++ W+L++ S+ + KQYA KNL L A T++ ++EAAVVF D Sbjct: 19 TFRQALTRINMLVVIITMVVSWMLITAASLFSFKQYADKNLQLLAYTLSRNVEAAVVFRD 78 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQP 132 G AA E LA+LGQQ QF A + D + N+L +W ++ FS F S WLF + Q Sbjct: 79 GTAANEMLASLGQQEQFRRAVLSDAKGNVLTNWRAAEQEEPGWFSLFTSRWLFRGSVKQS 138 Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 I H G+ +G + + D++I F+ FSL LT CILLAS +AI ++ LH GL++AL NI Sbjct: 139 IYHRGQLVGYLEIAGTDTTIRQFVSFSLLSLTLCILLASILAIFISHRLHRGLIQALHNI 198 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 +VVHD+R+NR+FSRR+ + +IAE F D NSLLDE+E WQ +++ +N LL +L D Sbjct: 199 AEVVHDIRNNRHFSRRIPKVKIAELDSFGHDLNSLLDEIESWQQQMRKENDSLLERSLRD 258 Query: 253 PLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 PLTGLANR AF + ++ + + ++ALLF+DG++FK+INDT+GHA GD+VLI IA R Sbjct: 259 PLTGLANRTAFLGALGNILADRHHQTSAALLFMDGNSFKHINDTYGHAAGDQVLIAIANR 318 Query: 313 LAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLS 372 LA + + A RLGGDEFA++L D+ S+V+++ ++ Q P L + +++LS Sbjct: 319 LARYSRKQDLAARLGGDEFALILADIHDVSDVERVADSIRQAMQEPIPLDESLKVSISLS 378 Query: 373 IGYAMTIEHASAEKLQELADHNMYQAKH 400 IG AMT + E L AD MY K Sbjct: 379 IGIAMTEPEMTPEALMAQADKAMYLDKQ 406 >UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria RepID=B1JL26_YERPY Length = 436 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 145/397 (36%), Positives = 224/397 (56%), Gaps = 1/397 (0%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 N NS K PT LR I ++ ++++ + L+V ++ L+ Y NL L A ++Y+ Sbjct: 17 NHNSAEKLPTLAGVLRRIHLSVAIVSVVTACIFLTVAALFALRVYVDHNLHLIARAISYT 76 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 EAAVVF D A E LA + + + A++ DK +A W P ++ W Sbjct: 77 TEAAVVFGDNVEANELLALIASNEEVAEAKIIDKHNRQIAYWALPDDGPIHHMEQIVARW 136 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 + PAP++ P+ H G+ IG++ + S+ F+ LA + C+ +++ +A+ L+R + Sbjct: 137 ILPAPVVLPMFHAGDEIGKIVIVGHGGSLLRFLLQGLAGMLACLTVSTLVALFLSRRMLL 196 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 G+V +LK IT+V H+V +R+F +RV ++AE + + DFN LL+E+E WQ L +N Sbjct: 197 GIVGSLKRITEVAHNVSRHRSFGQRVPSAKVAELNELSNDFNGLLEELEVWQKHLTQEND 256 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 L A HD LTGLANR F ++ +N+ + +A+LFLDGD+FK +ND +GHA GD Sbjct: 257 SLAYRAAHDSLTGLANRTFFEGRLSRTLNDCQPGEHTAVLFLDGDHFKDVNDNYGHAAGD 316 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 VL IA R+ RLGGDEFA++L + + +V I + LP L Sbjct: 317 LVLTTIAVRIRALLRETDLVARLGGDEFAVLLTPIHNLDDVLTIADHIIDSMALPIILAE 376 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 G + T++LSIG A+ +HA + EKL + AD MYQAK Sbjct: 377 GCEITVSLSIGIAVYPDHAQTPEKLLQRADEAMYQAK 413 >UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z8H3_EDWTE Length = 388 Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 143/384 (37%), Positives = 221/384 (57%), Gaps = 4/384 (1%) Query: 18 LRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAAT 77 + I + I +T++L + LS+ S+ TL+ YA+ NL L A T++Y+ EAAVVF D PAA Sbjct: 2 FQRIHIMIIAVTLLLAGIPLSLLSLFTLRTYAEHNLHLVAMTISYTSEAAVVFNDKPAAL 61 Query: 78 ETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNG 137 + L + ++ Q + A + D Q + W+ + ++ + + WL P+ + PI HNG Sbjct: 62 DALNMIAKREQIAEATITDVQHQVWVRWNSSTPS-HESLNRLLRGWLLPSSVSGPIEHNG 120 Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + IG V L A S + F+ + L L C++L + +++ L R +H G+V+ L I V Sbjct: 121 QLIGFVTLKADGSMLMRFLGYLLLGLLCCLILIALLSLYLVRRMHAGIVDELYAIAKVAR 180 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 VR R +S RV +IAE + FNSLL E+E L +N L ALHDPLTGL Sbjct: 181 QVREQRTYSLRVPHSQIAEIEELSRGFNSLLTEVESQHTLLINENGVLTYKALHDPLTGL 240 Query: 258 ANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 NR F +N L + + ++ ++FLDGD FK +NDTWGHA GDRVL+E+A RL++ Sbjct: 241 PNRTCF---MNMLESFNPRQERVCVMFLDGDGFKAVNDTWGHAAGDRVLVEVASRLSQQI 297 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 RLGGDEFA++L ++++ E +++ + Q P L NG + +MT SIG+ + Sbjct: 298 RKTDMVARLGGDEFAILLRNIEAPREAERVARGILQAVPQPIVLSNGVRVSMTFSIGFTL 357 Query: 378 TIEHASAEKLQELADHNMYQAKHQ 401 + H+ L + AD MY++K + Sbjct: 358 SSPHSQPAALLDKADAAMYRSKQR 381 >UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QBT8_9ENTR Length = 404 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 142/398 (35%), Positives = 220/398 (55%), Gaps = 1/398 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M +N ++ + + LR IS + + ++L WLLL TS+L +K Y ++NL L A T++ Sbjct: 1 MKFENIKTEKSSIRNKLRKISTINAAVILLLCWLLLFSTSMLFIKSYEKRNLELIANTLS 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 SL AA VF D A + + LG QG FS A++ +Q +L W D F + Sbjct: 61 TSLTAATVFEDSYDAKKKVLLLGSQGMFSAAKLTSSEQTVLVDWQDNTNDDS-RFQRTLR 119 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 HW++ P+ + H +G + L+ ++++ FI +S+ +L+ ++ ++ ++ L Sbjct: 120 HWIYAEPLTVNVTHEDAVVGTLTLSGTVTNVADFIEYSVIILSCSMIFVFIVSFLVSELL 179 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 H G++ + +NIT +H V + +FS R+S EF F+ D NSLL E++ + L Sbjct: 180 HRGILASFRNITSTIHYVIRSGDFSPRISGSSTKEFQVFSEDLNSLLAEVQTLKASLLRD 239 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 N L AL DPLTGLANRAAF S ++ L++ A++ LLFLDGD FK INDTWGHA Sbjct: 240 NKSLAAKALKDPLTGLANRAAFISKLSQLLDQQLAQENFVLLFLDGDRFKSINDTWGHAA 299 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL IA RL+ RLGGDEFA+++ + SE +QQ+ + + + Sbjct: 300 GDEVLQSIATRLSGLVTKSDLVARLGGDEFAILITSMTSEEALQQLTARIEASITQKIAI 359 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 G T +++IGYA + S + E AD +MY+ K Sbjct: 360 SAGVNITTSVTIGYAWSQHGDSVTSILERADMHMYKNK 397 >UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepID=Q88DZ8_PSEPK Length = 423 Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 143/397 (36%), Positives = 211/397 (53%), Gaps = 8/397 (2%) Query: 11 RPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVF 70 RPT + L ++ + + L + L++ VL L+ YA NL L A ++ Y++EAAVVF Sbjct: 10 RPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSINYTVEAAVVF 69 Query: 71 ADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII 130 D AA E+LA + + + A+V + + LA W ++ L P+I Sbjct: 70 DDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVASALLDEPVI 129 Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALK 190 PI H + +G + L + S+ F+ LA + C +L++ A L+R L + + L+ Sbjct: 130 LPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRLLSDITRPLR 189 Query: 191 NITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTAL 250 + V H R R+F RRV E IAE + DFN+LLDE+E W LQ++N L A Sbjct: 190 GLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQSENQTLAHQAS 249 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGL NRA F ++ + N+ AR+ A+LFLD D+FK INDT GHA GD VLI Sbjct: 250 HDSLTGLPNRAFFEGRLSRSVRNA-ARQQDHLAVLFLDSDHFKQINDTLGHAVGDEVLIS 308 Query: 309 IAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 +A+R+ LR + RLGGDEFA++L + + + + I + LP L +G Sbjct: 309 VAERVR--AQLREQDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMELPVQLDSGRS 366 Query: 367 TTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQR 402 + +LS+G A + A L AD MYQAK +R Sbjct: 367 VSTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRER 403 >UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LL52_RALME Length = 426 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 138/401 (34%), Positives = 208/401 (51%), Gaps = 6/401 (1%) Query: 5 DNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSL 64 D+++ +RPT RALR I + I + + + L+ + L+ YA NL L A ++ Y++ Sbjct: 11 DDAVPQRPTLYRALRRIHLGVALIAVFTVGISLTALGLTALRVYADHNLRLVARSIAYTV 70 Query: 65 EAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL 124 EA VVF D AA + L+ + + V D+ + W + L Sbjct: 71 EAPVVFGDAAAAADALSVIAASEDVTRVIVYDRDHQPMTVWQRPGHEQFPALRRVAGDLL 130 Query: 125 FPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNG 184 + QPI H + +G VR+ ++ HF+ L C+LL + +A ++R + Sbjct: 131 ISGAVEQPILHEAQQVGSVRVAGDPVALLHFLLQGTLGLGACLLLTALVAHYMSRRMLRD 190 Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 +V L+N+ V H VRS R F +R+ RI E + + DFN LLDE+E WQ +LQ +N Sbjct: 191 VVNPLRNLMRVAHAVRSERAFGQRMPPARIEELNALSEDFNVLLDELEAWQNQLQHENRS 250 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGD 303 L A HD LTGL NRAAF ++ + + AR + +A+L+LD D+FK IND +GHA GD Sbjct: 251 LAHRASHDSLTGLLNRAAFTEALDLAVRTAAARNQYAAVLYLDSDDFKGINDRYGHAAGD 310 Query: 304 RVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 VL+ + +RL G LR RLGGDEFA+++ +++ + +I + P L Sbjct: 311 AVLVAVGQRLR--GCLREGDSVARLGGDEFAVLVNALRAPEDAVRIAEHILNAMATPVCL 368 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 +G LSIG A+ HA + L AD MY AK Q Sbjct: 369 ADGTTIFAPLSIGLAVYPLHARNGTALLHSADAAMYGAKRQ 409 >UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteobacteria RepID=A0KJG8_AERHH Length = 422 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 140/398 (35%), Positives = 205/398 (51%), Gaps = 2/398 (0%) Query: 9 NKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV 68 N+R T +++L + + + + +LL+ ++L L+ YA NL L A ++Y+ EAAV Sbjct: 9 NQRLTLRQSLGRTHLVTSLTAVCMAGVLLTGIALLALRLYADHNLELVARAISYTSEAAV 68 Query: 69 VFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAP 128 VF D AA E L A+ + A + +LASW P +++ + P P Sbjct: 69 VFHDEEAAREALQAITTHEDVARASIYLPSGQLLASWSRAMSTPWSGLEQYLARLILPGP 128 Query: 129 IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 + QP+ G I + L + F+ +L + C++L++ A+ + R + N L Sbjct: 129 VDQPMLRGGVEIARIHLVGHGQYLLLFLLQTLLAMLLCLVLSTLGALYVARRMQNSLTAP 188 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 LK++ V H V R + RV E IAE H DFNSLLDE+E WQ + +NA LL Sbjct: 189 LKDLAQVAHSVSRQRILAMRVPEANIAELHALGQDFNSLLDELEAWQAHQRRENASLLHQ 248 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LTGL NRA F + ++ + ALL+LD D FK INDT GHA GD VLI Sbjct: 249 ATHDALTGLPNRALFEARLDQAVTTGRLHDERFALLYLDCDRFKQINDTLGHAAGDDVLI 308 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +A+R+ RLGGDEFA++L + E + + + + Q P L +G Q Sbjct: 309 ALARRVQHQLRPMDLVCRLGGDEFAILLTPLSQVGEAEDVVARIQQAMADPVVLGDGSQL 368 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 +SIG A+ + +A L + ADH MYQAK R E Sbjct: 369 LAAVSIGIALYPDQGLTAADLLQQADHAMYQAKRLRRE 406 >UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X923_METSD Length = 409 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 132/398 (33%), Positives = 214/398 (53%), Gaps = 14/398 (3%) Query: 12 PTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFA 71 P + LR ++ I ++ L L++ + L+ YA +N+ L A +++Y++EAAV+F Sbjct: 9 PRLDQVLRRAHLSVALIAVISSGLALTLAGMYALQAYATQNMQLVARSLSYTVEAAVLFN 68 Query: 72 DGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTF--SNFISHWLFPAPI 129 D A E L +G++ + V + LA+W R + G F +++++ + P P Sbjct: 69 DELAVQEALDKVGKREDVAEIRVIGRHGIPLANW--KRPETGAFFHLESWLANIVMPEPY 126 Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 P+ H+ TIG +RL + ++ ++ + C+ ++ +A+ L+R +H G+ L Sbjct: 127 YYPVTHDNMTIGRIRLVPHSRLLLEYMVTGISCVFACMAFSTLLALALSRRMHAGISGPL 186 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + D H VR R+F R IAE ++ DFN+L+DE+ WQ ++ ++ L A Sbjct: 187 NILADTAHRVRQYRSFGLRAPAANIAELNQLNQDFNALMDELATWQRHVKREHDTLAYRA 246 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRVL 306 HD LTGL NR+ S + + DAR S AL+F+DGD+FK INDT+GHA GD VL Sbjct: 247 NHDSLTGLCNRSLLESELEHAVR--DARFHSNAVALMFMDGDHFKEINDTYGHAAGDEVL 304 Query: 307 IEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +A R++ G LR RLGGDEFA +L ++ + I + P L NG Sbjct: 305 KIMALRIS--GQLRESDIVARLGGDEFAALLKPIKHAEDAVHIAEKIAHQMQSPITLPNG 362 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 T +++IG A+ +HA +A++L AD MY+AK Q Sbjct: 363 ELITCSVTIGIALYPDHARTAQELLAAADEAMYRAKDQ 400 >UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepacia complex RepID=B1YZK2_BURA4 Length = 422 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 137/400 (34%), Positives = 206/400 (51%), Gaps = 12/400 (3%) Query: 10 KRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVV 69 RPT + LR + F+ + + + L V +V+ L+ YA NL L A ++ Y++EAA+V Sbjct: 14 PRPTLQSVLRRAHLRLAFVAVAMAAVSLIVVAVIALRAYAGNNLNLLARSLGYTVEAALV 73 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 F D AA E +A + + V + + + A+W + ++ P P+ Sbjct: 74 FGDRVAANEAIATIANDEDVAQVVVTNARGQLFATWKLPAEGRIARIERGVADLALPGPV 133 Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 P+ H+G +G+V + R F+ + + GC++++ A ++ L +V L Sbjct: 134 TIPVMHDGIVVGQVIVRGRGHQFFGFLLGGIGGILGCLVVSVLGAYVSSKRLLRNIVAPL 193 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + + V H VR R F RRV IAE ++ DFN+LLDE E+WQ L+ +NA L A Sbjct: 194 RALAGVAHAVRRERAFGRRVEPAAIAELNQLGDDFNALLDEFEDWQNTLRDENASLEHKA 253 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRVL 306 HD LTGL NRA F S ++ + DA T A+L+LD D FK IND GH GD VL Sbjct: 254 THDALTGLPNRAQFESRLSVAL--CDAVVTGQRVAILYLDCDRFKEINDCLGHDAGDAVL 311 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN--LP-FDLHN 363 + +A RL RLGGDEFA++L V+ EV+ +C +I + +P +L + Sbjct: 312 VGVAGRLRTQVRETDLVARLGGDEFAVMLGTVR---EVESVCRIADEILSGMVPSIELPD 368 Query: 364 GHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 G +S G A+ +HAS A L AD MY+AK R Sbjct: 369 GRMVATMMSAGVALYPDHASDANGLLRAADAAMYRAKRTR 408 >UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T2V1_9BURK Length = 410 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 127/362 (35%), Positives = 187/362 (51%), Gaps = 2/362 (0%) Query: 43 LTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL 102 + L+ YA NL L A ++ Y++EAAVVF D A+ETL + + A V D + + Sbjct: 42 VALRVYAGNNLHLVARSLAYTVEAAVVFGDRQDASETLRRMVVDEGVAEARVMDARGAVF 101 Query: 103 ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAV 162 A WH + + ++ + P+ PIRH GE G V L + + +F+ LA Sbjct: 102 AEWHAEQGGLAGRLAPAVAAMVGLQPVSVPIRHEGEDNGSVVLRSDGMGLLYFLGTGLAA 161 Query: 163 LTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFAL 222 L C+ ++ + + L+R + +V L+ + V VR + RV RIAE Sbjct: 162 LALCLAVSGAVGLVLSRRMLRDMVVPLQALASVARSVRRDHVQGLRVPPARIAELDALGD 221 Query: 223 DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-A 281 DFN+LL E+E Q LQ +N L ALHD LTGL+NR+ F + + ++ + TS A Sbjct: 222 DFNALLQELEHRQALLQQRNIALTHQALHDGLTGLSNRSHFEQHLQSRLDEARGAGTSVA 281 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSE 341 LLFLD D+FK +NDT GHA GD +L+ +++RL RLGGDEFA+V+ V Sbjct: 282 LLFLDNDHFKAVNDTHGHAAGDALLVAVSQRLRAQARDTDLVARLGGDEFAIVMAPVAGL 341 Query: 342 SEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 + +++ S + + P L NG Q +SIG AM H L AD MY+ K Sbjct: 342 RDAERMISRVQEAMRDPVTLDNGVQLQPAVSIGVAMFPLHGQDMGALMRFADMAMYRVKA 401 Query: 401 QR 402 +R Sbjct: 402 ER 403 >UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW99_DELAS Length = 409 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 114/369 (30%), Positives = 179/369 (48%), Gaps = 3/369 (0%) Query: 41 SVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQN 100 V TL+ Y NL L A ++ Y++EA++VF D A L L + + AEV D + Sbjct: 38 GVATLRLYLSNNLHLVARSLAYTVEASLVFGDRDEAARVLDQLLRGEGVAHAEVFDAEGR 97 Query: 101 ILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL 160 W + ++ + +R +G +G V+L + + F+ Sbjct: 98 PFVRWSGHGGSALSSIGELLAVGIGLPRAEADVRQDGRLVGSVQLASDGVGLVRFLGAGF 157 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRF 220 VL C+ ++ + + +R + + E L+ + V VR +R+ +RV RIAE Sbjct: 158 IVLVLCVGVSGYVGLRQSRRMLRDIAEPLQQLARVARAVRHDRSMDQRVPLARIAELREL 217 Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKT 279 +FN+LL E++ RLQ +N+ L R A D LTGLANR F + +++ +++ + Sbjct: 218 GDNFNALLAELQTRHERLQQQNSALERQASRDSLTGLANRLHFEQRLQQALDSAAESGQK 277 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 A+LFLD D FK +ND +GHA GD +L + RL RLGGDEFA++LY V Sbjct: 278 LAVLFLDNDRFKQVNDAYGHAVGDVLLKAVGARLRSQVRETDLVARLGGDEFAILLYPVG 337 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQA 398 + Q + + P + G ++S G A+ +H S E L AD MYQA Sbjct: 338 GGGDAQMVRDKIEAAMREPLVVSEGVVLQPSVSAGVALFPKHGQSMETLMRHADQAMYQA 397 Query: 399 KHQR-AEKL 406 K R AE++ Sbjct: 398 KAMRQAERI 406 >UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GWL0_SPHAL Length = 408 Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 117/371 (31%), Positives = 172/371 (46%), Gaps = 5/371 (1%) Query: 8 LNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAA 67 + R T ++ L + L L + + V L+ YA +N+ L A Y +E A Sbjct: 13 IGARTTLQKLLSRFHFGITLFAVALSGLTILLAGVTALRGYADRNMELAAQLGAYGVEPA 72 Query: 68 VVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPA 127 +VF D AA E + L + + V D + W DP + +S FP Sbjct: 73 LVFNDPVAAREGIEPLTRIPGITRLRVIDDVGRPVIEWKSPAGDP----APLLSRTFFPR 128 Query: 128 PIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVE 187 P +R NG IG V + S++ ++ L C+L+ + I L R LV+ Sbjct: 129 PFAVTVRRNGSAIGTVEVWGDSSTLIDYVRLGLLAGLACLLVTALGTIFLARRFEYELVK 188 Query: 188 ALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLR 247 L I V HDVR +R F +RV IAE R D N+LLDE++ WQ ++++ A L Sbjct: 189 PLNEIATVAHDVRLHRRFDKRVKPLGIAELDRLGGDINALLDELQGWQGHMESERALLAH 248 Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVL 306 A HD LT L NRAAF + + + AR ALLF+D DNFK ND +GHA GD VL Sbjct: 249 RASHDTLTALPNRAAFDEQLALRIAAAKARDGRFALLFIDADNFKAANDNFGHAAGDAVL 308 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 + I+ + A R+GGDEF +++ + + L P L +G Sbjct: 309 VAISACIRNTLRKDDFAARIGGDEFVVIIDPFDVGVVPADLANRLRACIADPITLPDGES 368 Query: 367 TTMTLSIGYAM 377 ++S+G A+ Sbjct: 369 YRASVSVGVAV 379 >UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHB3_ACIJO Length = 412 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/398 (29%), Positives = 193/398 (48%), Gaps = 22/398 (5%) Query: 16 RALRNISMTSIF---------ITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 R N S+ IF +T+ + L+ V S+ T+ YA+++L + +AT++ ++ Sbjct: 3 RKSSNTSLQKIFSQSQLLIFALTLGICSLIFVVISIYTMNTYAKQSLNIFSATLSEQIQP 62 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS---NFISHW 123 AV+F D +TL QQ +V + Q LA + P F+ N Sbjct: 63 AVIFNDSITLQQTLNNHIQQYPIRAIQVINLQGKPLAEAY----KPTPEFAWMENLFDKV 118 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 F P+ + I+H G + + + + F + L L+ I + I + L + Sbjct: 119 FFKHPVTRTIKHQNNQYGTLIIYGSATQLMSFFFQLLICLSAGIFVILLIMLWLVHSTYQ 178 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 L+ +++ + + V + + + R+ I EF + FN+LLD+++ +LQ++N+ Sbjct: 179 KLMHSIQPMVNTVESLNLDTQYQARLPSSPIYEFRVISGAFNNLLDKVQRTNEKLQSENS 238 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSD--ARKTSALLFLDGDNFKYINDTWGHAT 301 QL ALHD LT L NR F N L N + + +AL F+D +NFK IND +GH Sbjct: 239 QLSHQALHDQLTELPNRHYFY---NILFNQFEHPEKNQTALFFIDNNNFKNINDVYGHLA 295 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL E+A+RL + RLGGDEFA++L +++ ++ IC L + P Sbjct: 296 GDAVLKEMAQRLKKNVRSHDVVARLGGDEFAILLRNIKHYDHLELICEHLIECSKAPLYF 355 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + HQ + SIG A + + E L AD+ MY+AK Sbjct: 356 -DQHQIHFSFSIGVAFSKCATTPEDLIAEADNAMYKAK 392 >UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepID=B2HZ17_ACIBC Length = 366 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 110/360 (30%), Positives = 173/360 (48%), Gaps = 12/360 (3%) Query: 45 LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILAS 104 ++ YA++NL L + T+ ++ AVVF D + L + D + +++A Sbjct: 1 METYAKQNLQLLSHTLLERIQPAVVFNDKITIEQILNEYTNDHSIRAIHIYDSEHHLIAQ 60 Query: 105 WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHF---IWFSLA 161 + + HW P+ I H+ + +GE+ L I F I LA Sbjct: 61 -SFKLSSQTSVLEKWFDHWFLNEPVHLTIYHHQQNVGELTLFGSSEKILQFLKMIMVGLA 119 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 + I+ A ++ LT + +++A+ +T++ V + ++ R RI EF Sbjct: 120 IAMLFIVCALWWSVNLT---YRQIMQAIYPLTNIAQIVSEQKAYNLRFPYNRIKEFQDLN 176 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSA 281 FN LL+E++ W +LQ +N +L A HD LT L NR F + + + D SA Sbjct: 177 TVFNELLEEIQIWDNQLQKENRKLSFQAHHDQLTLLPNRHYFYQILLDMFEDKDFDNKSA 236 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQ 339 LLF+D +NFK IND +GH GD VL E+AKRL LRH+ + RLGGDEFA++L+ + Sbjct: 237 LLFIDNNNFKSINDQFGHLAGDEVLKEMAKRLQ--TRLRHQDFIARLGGDEFAVILHSIT 294 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + I L + P L N + S+G A++ +S E AD MY+AK Sbjct: 295 HADHLISIAENLLESCKEPLHL-NDQTIYFSFSVGIALSQFASSPEDFIMQADQAMYKAK 353 >UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YD55_9GAMM Length = 669 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 117/403 (29%), Positives = 187/403 (46%), Gaps = 36/403 (8%) Query: 21 ISMTSIFITMMLIWLLLSVTSVLT-----LKQYAQKNLALTAATMTYSLEAAVVFADGPA 75 I++ I I +LI L +S +T LK+ + L AA+ T +A+VF D + Sbjct: 17 IAVVGINILTLLIMAGLLYSSFITAYEDNLKEVMSSKIRLLAASST----SALVFDDRES 72 Query: 76 ATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII---QP 132 A L++L + ++ D + + A + + +F S F I QP Sbjct: 73 AVTLLSSLKEHTATRYVQIYDADRQLFAEYRRPGQLVDVDIDDFESDAFFKNKNIYMSQP 132 Query: 133 IRHNGETIGEVRLTARDSSIS----HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 I N E +G + ++A +S++ H+I + AVL +LLA + L + L + E Sbjct: 133 ILMNSEYLGVIVISADTNSLNEQKNHYILIASAVLFISLLLAYLLNWQLQKRLTAPISEL 192 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 +K +V V N+ + RR++ R E L N++LD +E A QL + Sbjct: 193 MK----LVGYVAKNKKYHRRLNNARDDEIGDLTLGVNTMLDTIE-------AHETQLFQR 241 Query: 249 ALHDPLTGLANRAAFRS----GINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 A +D LT L NR GINT N + ALLFLD D FK IND+ GH GD Sbjct: 242 ANYDELTQLPNRHLLMERLAHGINTATRN---KTEIALLFLDLDRFKVINDSLGHRVGDE 298 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L+++A +L R GGDEF M+L ++++ ++ I + + P + G Sbjct: 299 LLVQVAGKLVRTLRKSDSISRWGGDEFVMLLENIKNVKDINNIVEKIVEELAKP-TMTGG 357 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 H ++ SIG A + + L + AD +MY+AK + K Sbjct: 358 HLLHVSTSIGIARFPQDGDDSLSLLKHADISMYRAKAKGPGKF 400 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 124/241 (51%), Gaps = 13/241 (5%) Query: 164 TGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALD 223 +G ILLA I+ +LT L N L++A IT N S R+ + EF A + Sbjct: 177 SGGILLALFISHSLTVPL-NQLIKATHRIT--------TGNLSYRIHLKNKDEFFLLAKE 227 Query: 224 FNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSA 281 FN + D +EE + Q NA+L HD LTGLANR I + A + A Sbjct: 228 FNQMSDWLEETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEIKEKKANQDHCFA 287 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSE 341 +LFLD D FK IND+ GH GD VLI IA+RL A RLGGDEF +++ ++ Sbjct: 288 VLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGDEFVILIKNLSDI 347 Query: 342 SEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKH 400 +V QI + + + P L N Q +T+SIG ++ E + +A+ L AD MY AK Sbjct: 348 KQVTQIADRILKQMSEPLILEN-QQLVITMSIGVVVSQENYENADDLLRDADITMYHAKQ 406 Query: 401 Q 401 Q Sbjct: 407 Q 407 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 110/393 (27%), Positives = 181/393 (46%), Gaps = 35/393 (8%) Query: 26 IFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQ 85 +F+T ++I + + T K L + A ++ ++ A+V+F D +E L++ Sbjct: 21 VFVTTLVIDVAIFAMQYHTAKTNLDARLNIEANIISQNISASVLFDDEKTTSEILSSFKS 80 Query: 86 QGQFSTAEVRDKQQNILASWHYTRKD---PGDTFSNFISHWLFPAPIIQPIRHNGETIGE 142 EV D + + S H T+ G FS I +PI +G+ IG Sbjct: 81 DPAILKVEVLDLAEKVF-SEHVTKDGYIVGGADFS-----------ISKPIVFSGDEIGT 128 Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + D+ IS I ++ +++A G+A L+ + + E++ + + V Sbjct: 129 LVVYVSDAEISSGISKTILFSITTLVIALGVAFLLSLAVQGMIFESILALHNTSQRVAKT 188 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA----------KNAQLLR-TALH 251 R++S R E R A FNS+L+++E+ L+ K A+ R A H Sbjct: 189 RDYSLRAEIFSEDEIGRLAKTFNSMLEQVEQRDAMLEKQVSHRTLELEKLAEEFRFRAFH 248 Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRVLIE 308 D LTGL NRA + + AR+ L LD D+FK INDT GH GD +LI Sbjct: 249 DNLTGLPNRALLNERFGLCIEH--ARRCGNKFVCLLLDLDDFKTINDTKGHDYGDELLIG 306 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH-NGHQT 367 +A+RL RLGGDEF ++ D+++E + +QI + + +F L D+ + Sbjct: 307 VAQRLKASVRAEDLVCRLGGDEFIILATDIETEFDARQIANNI--LFALSEDIVIKDDKI 364 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 +SIG A+ +H + L+ AD MY AK Sbjct: 365 KTAVSIGGAIYPQHGETVGVLKRHADVAMYHAK 397 >UniRef50_B8D253 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D253_HALOH Length = 501 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 2/157 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 A HD LT L NRA F N L NN+ A+LFLD D+FK +NDT GHA GD++LI+ Sbjct: 341 AYHDHLTKLPNRALFERYFNKLKNNTINLNKMAVLFLDLDDFKNVNDTLGHAIGDKLLIQ 400 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +AKRL + RLGGDEF ++L +++ +V + S L++ F PF L +G++ T Sbjct: 401 VAKRLKKNLKPSDTLSRLGGDEFTLLLTSIRTREDVIKFASDLSEDFKKPFIL-DGNKLT 459 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + SIG ++ ++ + + L + AD+ MYQAK Q+ + Sbjct: 460 IHPSIGISIYPDNGKNLDSLLKQADNAMYQAKKQKLD 496 >UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WC9_PSEA6 Length = 703 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 34/418 (8%) Query: 6 NSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLE 65 + L + F++ L I T++ I + +L+ S V + K + A+ ++ + Sbjct: 4 SKLRRASFFQKQLMAIIGTNLLILAIAAFLIYSAF-VDDYRDNLVKTMDSNASLLSAASR 62 Query: 66 AAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKD-----------PGD 114 +A++F D A LA+L + A++ D ++ A+ YTR D PG Sbjct: 63 SALLFHDEHAGQTILASLAKIPAMRFAQLLDSEKKRFAT--YTRDDASWDVMLDDIKPGH 120 Query: 115 TFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIA 174 F+N + + Q I + +G + L+A S+ ++ L S +A Sbjct: 121 FFTNDNLY------LTQDITLGEDVLGYIVLSADTHSLQAQQRRYGRIVLWVFALGSLLA 174 Query: 175 ITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 L + L +K + +V V + +R+ R + R NS+LD +EE Sbjct: 175 YLLNWRMQKRLQSPVKRLIHLVDYVAKEGRYDQRIFNRRQDDIGRLVNGINSMLDTIEEH 234 Query: 235 QLRL-----------QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-AL 282 Q +L + + QL A D LT L NR + I+ + + RKT+ AL Sbjct: 235 QSKLSEHHEHLEGLVELRTEQLYERANFDALTQLPNRHSLTEKISQAIEIARERKTNLAL 294 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +FLD D FK IND+ GH GD++LIE+AK++ R GGDEF +++ + + S Sbjct: 295 MFLDLDRFKVINDSLGHFMGDKLLIEVAKKIQHKLSDSDVVGRWGGDEFVVLIQNPKELS 354 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 V + + +LP + +GHQ ++ SIG A + A L + AD +MY+AK Sbjct: 355 SVDSLAKEIIASLSLPL-IVSGHQLHISTSIGIACFPDDGDDASSLLKHADTSMYKAK 411 >UniRef50_A3Y4T8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Marinomonas sp. MED121 RepID=A3Y4T8_9GAMM Length = 834 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 118/239 (49%), Gaps = 6/239 (2%) Query: 165 GCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDF 224 G IL+ SGI R +H + +K I ++V +++ F++ + +R E++ F Sbjct: 320 GFILIFSGI--IFVRQIHKHIKTPIKTIITRFNEVEADQ-FNQVIQLKRNDEWNTIEKAF 376 Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALL 283 N + ++E LQA+ +L A HD LTGLANR I +N + K LL Sbjct: 377 NKMSKRLDETYQELQAERIKLNHLAHHDVLTGLANRLQIYQDIEHCINKAKQDKGKFGLL 436 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 FLD D FK +ND GHA GD++L +IAKRL E RLGGDEF ++ D Sbjct: 437 FLDVDQFKNVNDNLGHAMGDQLLKQIAKRLRETVASDGIVARLGGDEFMIIYPDEDHLGT 496 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 +Q L I N PF+L N SIG + +H + E L AD MY +K + Sbjct: 497 LQDRAEELNDILNQPFEL-NMTSVLAGSSIGVCLYPQHGDTLETLVSNADVAMYHSKRK 554 >UniRef50_A6UJV0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sinorhizobium RepID=A6UJV0_SINMW Length = 729 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 4/162 (2%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWG 298 Q A+L A HDPLTGLANRA+F + + +S A + +ALL+LD D FK +NDT G Sbjct: 294 QESQAELNHLARHDPLTGLANRASFNQSLAQAVASSAADQANALLYLDLDRFKQVNDTLG 353 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GDR+++ +AKRL E R+GGDEF +V+ + E EV+++C +L P Sbjct: 354 HPVGDRLMVAVAKRLMETASA-GVISRIGGDEFTIVVERTRQE-EVEKLCDSLIAAIRQP 411 Query: 359 FDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 F++ +G + LSIG A+ T A ++ AD +Y AK Sbjct: 412 FEI-DGQPILIGLSIGVAVATGNDADPVEITRKADIALYHAK 452 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 2/161 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A +DPLTGL NR + ++ M+ + R ALLFLD D FK +ND +GH GD +L Sbjct: 572 AFYDPLTGLPNRRLLQDRLHQAMSQARRERGRLALLFLDLDKFKPVNDDFGHQAGDELLQ 631 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +A+RL RLGGDEF ++L +++ + + + Q F PF L G Sbjct: 632 AVAQRLQACVRESDTVARLGGDEFVLLLPSIEAAQDAMAVAEKIHQAFGRPFTLSAGRNA 691 Query: 368 TMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKLV 407 TM+ S G A+ EHAS EK L AD MYQAK ++ V Sbjct: 692 TMSFSTGIAVYPEHASDEKALMRHADEAMYQAKAAGRDRFV 732 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 82/275 (29%), Positives = 137/275 (49%), Gaps = 7/275 (2%) Query: 129 IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 ++QP+ + E +G V + A + ++ V +L+ A + L + Sbjct: 152 LVQPVYFDYERVGTVVIHADTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQMISRP 211 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 L ++ + DV +++N++ RV++ E FN +L E+EE L+ + A L + Sbjct: 212 LLDLLSSMKDVSASKNYAIRVAKPSDDEIGLLYDGFNEMLSEIEERNQILRQRQAHLQQL 271 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A +DPLT L NR F + +N ++ R+ +++F+D D+FK INDT GH TGD +LI Sbjct: 272 AHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLI 331 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 ++A RL+ RLGGDEF + +V + + + L +F PF L + Sbjct: 332 DVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGES-EI 390 Query: 368 TMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAK 399 +T SIG +T+ + + EL AD MY AK Sbjct: 391 YVTASIG--VTLFPNDGKTVDELLMNADIAMYHAK 423 >UniRef50_B9Z5V5 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5V5_9NEIS Length = 507 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 93/171 (54%), Gaps = 9/171 (5%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRS----GINTLMNNSDARKTSALLFLDGDNFKYIND 295 A+ +L A HD LTGLANR F I + N K ALL LD D FK +ND Sbjct: 341 AREQELFHLANHDALTGLANRNLFEDRLQHAIRRVRRNG---KRLALLLLDMDRFKPVND 397 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GHA GDRVL IA RL E RLGGDEF ++L DV ++++V Q+ L Sbjct: 398 TYGHAAGDRVLQLIAARLNEVLRGEDTVARLGGDEFVVLLEDVDADADVAQVLERLQLAL 457 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 P+D+ +G T+ +SIG A S E+L +AD MY AK + AE+ Sbjct: 458 QEPYDI-DGGTVTLGVSIGTAFYPHDGDSIEELLAVADRTMYSAKQRAAER 507 >UniRef50_B6AQD1 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Leptospirillum sp. Group II RepID=B6AQD1_9BACT Length = 1029 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 5/168 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAF-RSGINTLMNNSDARKTSALLFLDGDNFKYIND 295 R + K +L A HDPLTGL NRAA R L R+ LLF D D FK +ND Sbjct: 840 RERRKEKELRLLAFHDPLTGLPNRAALEREFEGYLAVARRYRRVLVLLFFDLDGFKEVND 899 Query: 296 TWGHATGDRVLIEIAKRL-AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 + GH GD++L E+A R+ +E G + +RLGGDEF ++L + + +EV+Q+ L ++ Sbjct: 900 SLGHEAGDQLLAELAIRVESELRG-GDRLFRLGGDEFLVILNNAGTRTEVEQLARRLLEV 958 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQ 401 + PFDL + + + SIG A+ E+A++++ L +AD MY+AK++ Sbjct: 959 IHQPFDLRD-QEVGIGASIGIALYPENAASQQDLLRMADMAMYRAKNR 1005 >UniRef50_C1A983 Putative response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A983_GEMAT Length = 615 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 2/167 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDT 296 L+A + A HDPLTGLANR F+ + L S + + L+F+D D FK INDT Sbjct: 140 LEAARVEAAHRATHDPLTGLANRELFQDQLERALAFGSRYNRKTGLIFVDLDGFKAINDT 199 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GD +L +A RL E RLGGDEF ++L DV S +V + + F Sbjct: 200 RGHALGDLLLKVVAGRLLECVRRSDAVARLGGDEFVVLLPDVTSRRDVAFVKDCIIDAFR 259 Query: 357 LPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQR 402 P + + T+ SIG AM+ ++ A A+ L + AD +MY+ K+QR Sbjct: 260 TPIQVSDSEFLTVEASIGGAMSPLDGAVAQDLLDAADADMYREKYQR 306 >UniRef50_A6D546 Hypothetical 918 kDa protein Y4LL n=1 Tax=Vibrio shilonii AK1 RepID=A6D546_9VIBR Length = 426 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 2/150 (1%) Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 DPLT L NR + ++ + R A +FLD DNFK INDT+GH GD +L+ +A Sbjct: 259 DPLTSLPNRRLLDVKLQEMICHCWNRSEKIAFMFLDIDNFKVINDTYGHVIGDEILVALA 318 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMT 370 +RL +F RLGGDEF +VL + S V I + L Q+ + P D+HNG + T Sbjct: 319 ERLQDFTRQTDVVSRLGGDEFLVVLPGLNSREHVLSIANHLLQVSSHPIDVHNGDKVTPE 378 Query: 371 LSIGYAMTIE-HASAEKLQELADHNMYQAK 399 LSIG + + H ++ +AD MY+AK Sbjct: 379 LSIGTTLCLSGHIDIQQAIHIADTAMYEAK 408 >UniRef50_B8KJL8 Response regulator/sensory box/ggdef domain/eal domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJL8_9GAMM Length = 660 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 16/187 (8%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDG 287 LD E+++R +L TA HDPLTGL NR +F +GIN+L N A+ F+D Sbjct: 202 LDRGAEYRVR-----TKLQHTAEHDPLTGLLNRGSFSAGINSLDENR--MNNLAIAFVDL 254 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK +NDTWGHA GD +L A RL RLGGDEFA+V ++ ++ + + Sbjct: 255 DQFKAVNDTWGHAVGDELLKVAALRLQRCARHSDMVARLGGDEFAIVAFNCPNDESLPAL 314 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMT--------IEHASAEKLQELADHNMYQAK 399 + + N + +GHQ + SIG A + + AE+L AD MY AK Sbjct: 315 GEKIARRMNGDVTI-DGHQIALNTSIGIAHSQWCSEPKLPDGQCAERLMSFADEAMYVAK 373 Query: 400 HQRAEKL 406 R ++ Sbjct: 374 RSRGKRF 380 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 3/163 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWG 298 +A A+L A DPLTGL NRAAF IN + A ALL++D D+FK+IND+ G Sbjct: 279 RAVEAKLAHLATRDPLTGLPNRAAFSEHINQRAVEATADSAIALLYIDVDHFKHINDSKG 338 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 HA GD +L ++++RL + G RLGGDEFA+VL ++ + L Q + Sbjct: 339 HAAGDALLCQVSERLLQLAGEGDLVARLGGDEFAVVL-ELDEPERAGRFAQRLLQTLSHA 397 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKH 400 FDL +G + +T S+G A+ +HA A+ L AD +Y AK Sbjct: 398 FDL-DGAREHVTCSVGIALAPDHAGDADVLMRHADLALYAAKE 439 >UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LW67_ACIC1 Length = 884 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 6/172 (3%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDN 289 +E+ +L+ +L + A HDPLTGLANRA F ++ ++ + A +T A+LF+D D+ Sbjct: 422 LEQSLAQLRELEQKLTQLAFHDPLTGLANRALFSERLSQVLAKAKAEGRTCAVLFIDLDD 481 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQI 347 FK +NDT GH GD +L +A+R+ G LR + RLGGDEFA+++ D S ++I Sbjct: 482 FKTVNDTLGHDAGDELLCAVAERIT--GCLRPSDQPARLGGDEFAVIIEDALSTQAAERI 539 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + +T+ P +H G + + SIG A + +A++L AD MY AK Sbjct: 540 AARITEQLRAPISVH-GCELHIRASIGIATSQGVQTADELLRNADLAMYMAK 590 >UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium RepID=B8I783_CLOCE Length = 856 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 11/185 (5%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDG 287 LDE+ Q L + ALHD LTGL NR + + + + +KT LLF+D Sbjct: 413 LDEIRSIQKSLSQSEEKYNFMALHDVLTGLPNRRSLLEDSSRFLGINTGKKT-VLLFIDM 471 Query: 288 DNFKYINDTWGHATGDRVLIEIAKR----LAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 DNFKYINDT GH GD ++ + +R L + G L YRLGGDEF +++Y+++++ E Sbjct: 472 DNFKYINDTMGHEFGDELINKAGQRLKTALKDLGTL----YRLGGDEFILLIYNIENQFE 527 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 + S + Q F F++ N +T SIG A+ +H + E L + AD MY+AK Q Sbjct: 528 AEDFMSQVLQSFKDEFEIGNS-VLHITFSIGAALYPDHGNNIEDLIKCADIAMYKAKEQG 586 Query: 403 AEKLV 407 + V Sbjct: 587 KNRYV 591 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 95/163 (58%), Gaps = 5/163 (3%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHA 300 +QLL A +D LTGLANRAAF + ++ +N S A+LF+D D FK IND+ GH Sbjct: 226 SQLLHLAFYDILTGLANRAAFMNRLSHAINYSKRHSNYLFAVLFIDLDRFKVINDSLGHL 285 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD++L+ A RL A RLGGDEF ++L +Q S+V + + Q LPF+ Sbjct: 286 NGDQLLLATASRLQVCVRSIDTAARLGGDEFTILLEGIQDVSDVITVAERIQQELALPFE 345 Query: 361 LHNGHQTTMTLSIGYAM--TIEHASAEKLQELADHNMYQAKHQ 401 L G + +T SIG A+ T+++ E++ AD MYQAK Q Sbjct: 346 LE-GQEVFITASIGIALSSTLDYKHPEEVLRDADTAMYQAKVQ 387 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 3/165 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 ++ R A DPLT L NR F + + N L++ + +++ A+LF+D D FKY+NDT GH G Sbjct: 141 EVYRLANEDPLTNLPNRRCFMNYLENKLLHAASSKEKLAVLFIDLDRFKYVNDTLGHLFG 200 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 DRVL IA+RL + RLGGDEF +V+ DV+ + E + L I P + Sbjct: 201 DRVLKHIAERLQAHLPEKSMIARLGGDEFVVVMTDVKEKEEPVSLTEDLLTIIREPL-IM 259 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +G + T+T S+G A++ E+ AE L AD MY+AK + +++L Sbjct: 260 DGFEFTLTGSVGIALSPENGIDAEALLTSADAAMYRAKAKGSDRL 304 >UniRef50_A1TSZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TSZ0_ACIAC Length = 872 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 96/193 (49%), Gaps = 10/193 (5%) Query: 208 RVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI 267 RV+ I E F +L DE WQ A++ +LHD LTGL NR + Sbjct: 403 RVTARAIGEGQGFRGTATNLTDE---WQ-----AQARVRHLSLHDTLTGLPNRRRLHQFL 454 Query: 268 NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 TL+ + + ALL LD D FK +ND GHA GDRVL E+A+RL G + A RLG Sbjct: 455 ATLLESDGPAQPLALLCLDLDRFKPVNDALGHALGDRVLQEVARRLQALLGPQDIAARLG 514 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEK 386 GDEF +VL Q + + C+A+ PF +G + SIG HA +A++ Sbjct: 515 GDEFVLVLAGAQDPDAIGRRCAAVVAALCEPFAF-DGQIVCIGTSIGVVQAPLHARTAQE 573 Query: 387 LQELADHNMYQAK 399 L D +Y AK Sbjct: 574 LLRKGDIALYDAK 586 >UniRef50_B7UY89 Putative uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=B7UY89_PSEA8 Length = 735 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 88/165 (53%), Gaps = 3/165 (1%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWG 298 A QLL A DPLTGL NR AF + L+ ALL+LD D FK +ND +G Sbjct: 562 AYQQQLLEMAYRDPLTGLGNRKAFDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFG 621 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD +L +A+R+ KAYRLGGDEFA++L D Q E+ Q++ L P Sbjct: 622 HDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQ-ENNPQRLAERLLAALVQP 680 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 L+ +T SIG A+ HA AE L AD MY+AK QR Sbjct: 681 IALNGERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQR 725 >UniRef50_A6W8F9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8F9_KINRD Length = 537 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 2/155 (1%) Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRV 305 +R ALHDPLT L NR F + + + K A+L+LD D FK +NDT GH GD V Sbjct: 91 MRQALHDPLTDLGNRQLFTDRLQHALARRGS-KACAVLYLDLDGFKTVNDTHGHGVGDTV 149 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS-ALTQIFNLPFDLHNG 364 L+E++ RL R GGDEFA++ D+ E +I ++ I N P + +G Sbjct: 150 LVEVSHRLRAAVRPEDTVARFGGDEFAVLCEDLSDELNASRIADRVVSSIANHPIEFGDG 209 Query: 365 HQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + T+T S+G A+ + A A KL AD +Y+AK Sbjct: 210 RKLTITPSVGIALARDEADASKLLRRADAALYRAK 244 >UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X759_METSD Length = 765 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 5/165 (3%) Query: 239 QAKNAQLL--RTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYIND 295 QA +Q L + A +D LTGL NR F + ++ S ++ L+FLD DNFK IND Sbjct: 308 QAAASQKLIWKQANYDFLTGLPNRPMFHKQLAEEIHKSLQHQQPLVLMFLDLDNFKQIND 367 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 GH+ GD++L+E R+A RLGGDEF +VL +VQ++ +V+ +C + + Sbjct: 368 QLGHSIGDKLLVETGARIAAVARDCTLLARLGGDEFTIVLSNVQNQQQVEWLCERILRQV 427 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 +LPF + N H +T SIG A EH+ E L + AD MY+AK Sbjct: 428 SLPFTIEN-HVVYVTTSIGIASFPEHSRDVETLMKYADQAMYEAK 471 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 4/166 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYIN 294 +L+ QL A +D LTGL NR+ F + + + A+LFLD D FK +N Sbjct: 293 KLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEYCIKRVKRHPDQIFAVLFLDLDRFKVVN 352 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GHA GD++L+EIA+RL RLGGDEF ++L ++ S+ +C + Q Sbjct: 353 DSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDEFTVLLEGIKDLSDALLVCGRIQQS 412 Query: 355 FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 N PF+L NG + +T+S G A+ T+ + E+L AD MY+AK Sbjct: 413 LNCPFNL-NGREVLITVSTGVALSTMGYDDPEQLLHNADAAMYRAK 457 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 Q + A HDPLT LANR+ F + L + +LFLD DNFK +ND+ GHA G Sbjct: 517 QYIHQAFHDPLTDLANRSLFLYQVGHALARGARQHSPVTVLFLDLDNFKTVNDSLGHAAG 576 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 DR+L++ A+RLA RLGGDEFA+++ D QS EV + S + + PF L Sbjct: 577 DRLLVDAARRLASCVRSSDLIARLGGDEFAVLVEDAQSVEEVLVVASRIGTALSRPFML- 635 Query: 363 NGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 +G + ++ S+G A + S+++L AD MY AK Sbjct: 636 SGKEVFVSASVGIARSSRGESSDELVRNADVAMYVAK 672 >UniRef50_Q3A5U6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5U6_PELCD Length = 628 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 102/185 (55%), Gaps = 17/185 (9%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFK 291 +W+L Q + +L R A D LTGL NR F +N TL +K +ALLF+D ++FK Sbjct: 160 KWELNRQIQ-GRLHRLAYFDNLTGLPNRTQFLESLNKTLAIAQRKQKQAALLFIDLNDFK 218 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRH-----------KAYRLGGDEFAMVLYDVQS 340 INDT GH+ GD++L +AKRLA G +R K RLGGDEF ++L +V+S Sbjct: 219 RINDTLGHSMGDKLLEIVAKRLA--GCIRESDLLGSTCEGSKTARLGGDEFTVLLPEVES 276 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 E V + + P DL + HQ +T SIG A+ + AE L + AD MY AK Sbjct: 277 EQFVATVAKRIFHCLTRPADL-DKHQVMVTPSIGIALFPNDGKDAETLMKCADMAMYFAK 335 Query: 400 HQRAE 404 ++ E Sbjct: 336 NREPE 340 >UniRef50_A5FVT2 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVT2_ACICJ Length = 742 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 3/165 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYIND 295 LRLQA ++ A HDPLTGL NR F + + + ALLFLD D FK +ND Sbjct: 295 LRLQASEVRIHHLAFHDPLTGLPNRTFFNESADAALAALSG-TSIALLFLDLDRFKQVND 353 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD ++ E RL R+GGDEF ++L V +V+++C+ + + Sbjct: 354 TLGHPAGDTLIREFGARLRALVREEDMVARVGGDEFTVMLAGVAGREDVEKLCARIVESV 413 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAK 399 PFDL NG++ + LSIG A+ +H + L AD +Y AK Sbjct: 414 RTPFDL-NGNRVFVGLSIGVALAPDHGTDRIDLLRKADIALYSAK 457 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 5/161 (3%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYINDTWGHAT 301 +L + A DPLTGL NR R I + ++ N + K A+LF+D D FK +NDT GH Sbjct: 528 ELKKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKV-AILFIDLDYFKTVNDTLGHDV 586 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GDR+L+++AKRL+ R GGDEF V+ DV+ +V Q+ + +F+ PF+ Sbjct: 587 GDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFE- 645 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 NG ++ S+G A+ ++ + +L + AD MY+AK + Sbjct: 646 ANGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEE 686 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 93/174 (53%), Gaps = 7/174 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 L K Q+ A HD LTGL NR F + ++N + A A++FLD D FK IND Sbjct: 471 LYEKQKQVEHLAFHDALTGLPNRRKFEKDLKNILNTAQASANDVAVMFLDLDRFKKINDR 530 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 GH GD +LIE+AKRL G LR K R GGDEF ++L D+ SE I + I Sbjct: 531 LGHGIGDLLLIEVAKRLR--GCLRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNI 588 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLV 407 N PF + + + ++T SIG AM + + +L + AD MY+AK + V Sbjct: 589 LNKPFFIKD-EELSITPSIGIAMYPDCGTDVTELMKNADMAMYRAKANGKNRFV 641 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 7/163 (4%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR---KTSALLFLDGDNFKYINDTWGH 299 ++L A HDPLT L R F + M +DAR K A+ F+D DNFK IND+ GH Sbjct: 327 SKLEYMAFHDPLTNLPRRDVFLERLKVAM--ADARRNGKKLAVFFVDLDNFKIINDSLGH 384 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 TGDR+L +IAK L + R+GGDEF ++L DV S + ++ + ++F+ P Sbjct: 385 HTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILLPDVNSIEDTDKVAKRILELFDQPI 444 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQ 401 L+N ++ +T+SIG A+ +H +E+ + + AD MY AK + Sbjct: 445 KLNN-YELPVTISIGIAIYPDHGKSERAILKNADIAMYTAKRK 486 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 2/166 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 +L+ A+L ALHDPLTGL NRA +++ + ++ T ALL LD D+FK +ND Sbjct: 641 QLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVND 700 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 ++GH GD +L +++ RL + RLGGDEF ++L + S +V + + Sbjct: 701 SFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHAL 760 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKH 400 + PF L N + + SIG ++ EH S AE+L + AD MY+AKH Sbjct: 761 HQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKH 806 >UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEB0_TOLAT Length = 543 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 7/157 (4%) Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRV 305 R A +D LTGL R F + M ++ +K AL+FLD D FK +NDT+GHA GDR+ Sbjct: 380 RLAHYDVLTGLPTRVLFSDRLKQAMRSAKRNKKNLALMFLDLDKFKPVNDTFGHAVGDRL 439 Query: 306 LIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 L E+A R+ G +R R+GGDEF ++L+DV + + Q N PF L Sbjct: 440 LKEVASRM--LGCVRESDTVCRIGGDEFVILLHDVADAESAFNVAEKIRQALNQPFKL-A 496 Query: 364 GHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAK 399 GHQ ++ SIG A+ E+ E+ L + AD MY+AK Sbjct: 497 GHQMNISCSIGIALYPENGVDERTLTKNADMAMYRAK 533 >UniRef50_A6W8M5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8M5_KINRD Length = 612 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 4/158 (2%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATG 302 QL ALHDPLTGL NRA + + ++ + R A+LF+D D+FK +NDT GHA G Sbjct: 447 QLEHAALHDPLTGLPNRAKAEEQLRSALSRTVRRGGGCAVLFVDLDHFKDVNDTLGHAAG 506 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D +LI++A RL A R+GGDEF +V DV + I + + ++P DL Sbjct: 507 DALLIDVADRLRGLLRAGDLAARIGGDEFVLVCEDVGDAQALSSIAERVCERISIPVDL- 565 Query: 363 NGHQT-TMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 G +T T++ SIG A T E+L AD MY+AK Sbjct: 566 -GVRTVTVSASIGAARTEGDLGPEELLRAADRAMYRAK 602 >UniRef50_A5UVR9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Roseiflexus RepID=A5UVR9_ROSS1 Length = 921 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 92/173 (53%), Gaps = 4/173 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 R QA+ QL ALHD LTGL NR F ++ + + K A+LFLD D FK IND Sbjct: 480 RKQAEE-QLAYGALHDALTGLPNRTLFMDRLSLALKRAQREKHLFAVLFLDLDRFKTIND 538 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD +LI +A+RL RLGGDEFA++L + + E + I + Q Sbjct: 539 SLGHAAGDELLIAVARRLESVLRPGDTVARLGGDEFAVMLDRLNAPEEAEWIVERIHQAL 598 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 P + GH T SIG A+ E + E+L AD MYQAK QR + V Sbjct: 599 QAPLSV-RGHTVYTTASIGLALGNEGYERPEELARDADTAMYQAKMQRRARHV 650 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 9/189 (4%) Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTS 280 L +L +E++E + +LQ +N +L HD LT + NR F +N T+ N + T Sbjct: 198 LQVKNLAEELQESKEKLQVQNTKLEYDVYHDSLTEMNNRHFFWGNLNETIENAVKSNNTV 257 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV---LYD 337 ++ D D FK +NDT+GH GD +L +I++RL G YRLGGDEFA + L + Sbjct: 258 TVMLFDLDRFKVVNDTYGHDVGDMLLRQISQRLISMGLTSDTLYRLGGDEFAFLSSGLTE 317 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQ 397 + S Q IC A+ Q P+ ++N +T S+G ++ ++ L + AD +Y+ Sbjct: 318 SSAVSLAQNICDAINQ----PYTIYNTI-INITTSVGIVISDTERRSDYLYKFADLALYE 372 Query: 398 AKHQRAEKL 406 AK++ A K+ Sbjct: 373 AKNEGAGKI 381 >UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUG3_MARMS Length = 731 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 3/164 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDT 296 ++ K A+L A DPLTGL NR + + TL NN ++ SA ++ D DNFK INDT Sbjct: 292 VKEKTAELQELAYKDPLTGLPNRRFLQDSLPKTLHNNQRRKRISAFIYFDLDNFKRINDT 351 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD+VLI + RL + + RLGGDEF ++L D+ E + + + + + Sbjct: 352 IGHDVGDQVLIIVGDRLNKLKAMSDLVVRLGGDEFGILLGDIGDEKQASEQANRILESIR 411 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 P + + + ++ S+G AM EH + + AD +YQAK Sbjct: 412 TPIKM-DSREYILSTSLGIAMIPEHGYDLVTIMQNADMALYQAK 454 >UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MD86_9PROT Length = 1029 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 5/161 (3%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATG 302 QLL A DPLTGL NR F+ + +L+ N +R ALL+ D D+FKYINDT+GH+ G Sbjct: 606 QLLYLAERDPLTGLYNRHRFQEQLESLIANCLRSRGKFALLYFDLDDFKYINDTYGHSAG 665 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS-ALTQIFNLPFDL 361 D VL+ A ++ RLGGDEFA +L +Q + ++ + S +T I ++P Sbjct: 666 DTVLVRAAGEISSIIRQIEIFARLGGDEFA-ILSSIQPDEDINVLPSRIITAISSIPLRF 724 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 H G +T S+G A+ EH + E L AD MYQAK Q Sbjct: 725 H-GRNIRLTSSLGVAIFPEHGETTEDLIAHADTAMYQAKTQ 764 >UniRef50_A0KQV8 Gaf domain/GGDEF domain/eal domain protein n=2 Tax=Aeromonas hydrophila RepID=A0KQV8_AERHH Length = 761 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 16/226 (7%) Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 L+ L+ I +HD+ S + ++R+ + R + L L + +E + RLQ Sbjct: 279 LLLELRRIRQQLHDINSEDSINQRLQQLR-----QTNLRLQKQLKQHQELERRLQFD--- 330 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHATG 302 ALHDPLT L NRA + +N M + K+ +L+F+D D+FK +NDT GH+ G Sbjct: 331 ----ALHDPLTQLPNRALLMNHLNHAMTHFHRYKSPGFSLIFIDVDHFKQVNDTLGHSAG 386 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D++L E+++RL RLGGDEF + L + ++E ++ + + + + PF L Sbjct: 387 DQLLKEMSRRLQTCIRQNDMVARLGGDEFVIYLDNSKTEEDISPVLNRIISRLSYPFRLM 446 Query: 363 NGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLV 407 G++ +T+S+G A E S +L AD MYQAK ++V Sbjct: 447 -GNELGITVSLGVASVSEQTSDISQLLHQADLAMYQAKRNGRSRIV 491 >UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=66 Tax=cellular organisms RepID=B0CBA7_ACAM1 Length = 705 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 6/156 (3%) Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDR 304 AL+D LTGL +RA F ++ + + R+T+ A+LFLD D FK IND+ GHA GD+ Sbjct: 260 VALYDHLTGLPSRALFLDQLHRTLTRVN-RQTNYLFAVLFLDCDRFKVINDSLGHAIGDQ 318 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +LIE+A+RL RLGGDEFA++L ++ + + +Q+ S L + F+L G Sbjct: 319 LLIEVAQRLTTALRPGDVIARLGGDEFAILLENIAGQDQAEQVASRLNRELEKAFEL-QG 377 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 H ++ SIG A+ +H+ AE L AD+ MY+AK Sbjct: 378 HTVYISASIGIALNSDHSPQAENLLRDADNAMYRAK 413 >UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47K14_DECAR Length = 783 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 14/164 (8%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYINDTWGHATG 302 LL A DPLTGLANRA F + ++ L++ DA ++ A+L+ D D FK INDT+GH G Sbjct: 359 LLFMAERDPLTGLANRARFAAELDRLVSRFQRDATQSGAVLYFDIDEFKTINDTFGHRVG 418 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV-----LYDVQSESEVQQICSALTQIFNL 357 D VL+ A +++ RLGGDEFA+V L VQ+ +E ++ ALT L Sbjct: 419 DNVLVRTADVVSKLVRTGELLARLGGDEFAIVAPGADLDGVQAMAE--RVVKALT---GL 473 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKH 400 F+ +G + +T+S+G A+ EH ASAE+L AD MYQAK Sbjct: 474 SFEF-DGKRFGLTISLGIALLPEHAASAEELVAHADAAMYQAKR 516 >UniRef50_A8VV29 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV29_9BACI Length = 1011 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 7/168 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 L+ K ++ A D LTGL NR F++ + + D + + A+L++D D FK++NDT Sbjct: 571 LRQKELEIRHMAYFDGLTGLPNRQHFQTLLREQIAFVDEVEMALAVLYVDLDLFKHVNDT 630 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQI 354 WGH+ GD++L + +R+A G+ H+ R GGDEF M+L VQ E + L + Sbjct: 631 WGHSAGDKLLTMVGERMA--NGVDHRVVISRFGGDEFTMMLSPVQDRKEASDVVEVLQDL 688 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 F PFDL G++ ++ SIG ++ + S E L + AD MY+AK + Sbjct: 689 FRKPFDLE-GNEVYISCSIGISIYPNNGSTTEDLIKNADMAMYEAKSK 735 >UniRef50_B8KDQ1 Ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KDQ1_VIBPA Length = 452 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 107/186 (57%), Gaps = 17/186 (9%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFL 285 L +E++ ++L+ K+ QL+ + HDPLTGL NR AF + N ++ + + A+LF+ Sbjct: 246 LEEEVKRQTMQLEKKHEQLIFLSEHDPLTGLYNRRAFDKSLENAIVKANRTKCKLAILFI 305 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVL-----YDV 338 D D+FK +NDT+GH GD +L+ +A RL+ +R + RLGGDEF + L +D+ Sbjct: 306 DLDDFKVVNDTYGHDAGDAILVNVANRLS--NAIRQSDFVGRLGGDEFVICLDLLNNFDI 363 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQ 397 + +V+QI A+ + NG + +++ SIG + + + E L +AD MY+ Sbjct: 364 LPQ-KVEQIMQAICEPIGF-----NGRELSISASIGVSHFPDSTRNKEVLLSMADEAMYR 417 Query: 398 AKHQRA 403 +KH + Sbjct: 418 SKHVKG 423 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 3/165 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSA-LLFLDGDNFKYINDTW 297 +A QL+ A HDPLTGL NR + + + KT A LL LD D FK INDT Sbjct: 482 KAAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTL 541 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GHA GDR+L +A+R+ E R GGDEF ++L D++ S+V + L+ + + Sbjct: 542 GHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQ 601 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 P L +G + +T S+G ++ E + ++L AD MY+AK + Sbjct: 602 PV-LIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEK 645 >UniRef50_Q1ZFH2 Regulatory component of sensory transduction system n=2 Tax=Alteromonadales RepID=Q1ZFH2_9GAMM Length = 526 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 92/167 (55%), Gaps = 3/167 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSG-INTLMNNSDARKTSALLFLDGDNFKYIND 295 L+ Q+L A HD LTGLA R F+ I L + ++ A+LFLD D FK +ND Sbjct: 333 ELKHAKKQILYMANHDALTGLAMRQFFQDRLIKALADAKLNKQKIAVLFLDLDGFKKVND 392 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 ++GH TGD VL E+A RL E R+GGDEF ++L +++ + I L +I Sbjct: 393 SFGHHTGDFVLKEVAIRLTESVREIDTVGRIGGDEFCILLTNIKDQESTITISEKLIKII 452 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 + P+ N + +SIG A+ +HA + EKL ELAD MY K + Sbjct: 453 DKPYKYKN-ESIDIGVSIGIALYPDHADTPEKLVELADKAMYTIKRK 498 >UniRef50_Q88GL0 Sensory box protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88GL0_PSEPK Length = 503 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 3/162 (1%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWG 298 A +AQ+ A HD LTGL NR F + L+ S+ K +A L LD DNFK IND+ G Sbjct: 267 AAHAQIHHMAHHDALTGLPNRTLFHERLRQALLRGSENAKLTAALCLDLDNFKNINDSLG 326 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 HA GD++L E+ KRL RLGGDEFA+VL ++ L + + P Sbjct: 327 HAFGDKLLRELGKRLRRELREHDTLARLGGDEFAVVLTGLEGRDAACNTAQRLIKAISPP 386 Query: 359 FDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAK 399 F + GHQ + +SIG A+ +H AE+L AD +YQAK Sbjct: 387 FRI-EGHQFAVGVSIGIAIAPDDHDQAEQLLGYADMALYQAK 427 >UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q087E2_SHEFN Length = 681 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 106/413 (25%), Positives = 192/413 (46%), Gaps = 43/413 (10%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 T + L+ I M+ I+ + + + S + + K+ ++L + ++ ++ AA++F D Sbjct: 9 TISKKLQFILMSVALISTLTVTSIFSAFELSSAKREQVESLHSLSQMLSPNITAALLFDD 68 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS----NFISHWLFPAP 128 A E + + + + V + + +LA K P T + N I+ Sbjct: 69 QDAIQELINPILLRSDVLSVSVTNVEGAVLA--QALSKRPSMTLTDDDLNDITQ------ 120 Query: 129 IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 +I P+ + + G++ ++ DS I+ I F + +L + + L+ L + Sbjct: 121 VITPLTLDNQNYGDLHISVDDSIITDRISFYGQFIVLLLLSSLCASFFLSLFLRRKFLSP 180 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME--------EWQLR--- 237 + + + + ++++S R + E + FNS+LD +E E +LR Sbjct: 181 MLYLAKISQKITESQDYSLRAQIQSEDEIGQLTTCFNSMLDNIEQRESSLETEVKLRTGE 240 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTW 297 L+ N+QL A D LT L NR F + +L++ AL+F+D D FK IND+ Sbjct: 241 LENANSQLHEYAYQDGLTLLPNRRYFYEKLQSLIDTD--HMVFALIFIDLDGFKEINDSL 298 Query: 298 GHATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEFAMVLYDV----QSESEVQQICSAL 351 GH GDR+L ++AKRL G +R RLGGDEF +++ DV + S +++ S+L Sbjct: 299 GHEYGDRLLHQVAKRLR--GCVRDHDTVARLGGDEFTLIIEDVSDLEHAASIAEKVKSSL 356 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAKHQ 401 Q ++ Q +T SIG +T A + ++ L AD MY +K + Sbjct: 357 MQCISI-----EEVQVNVTGSIG--LTFYPADGQNVEALVKHADQAMYLSKSK 402 >UniRef50_C4KCR0 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T RepID=C4KCR0_THASP Length = 444 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 33/288 (11%) Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 AP++ +R +G RL A + F+ SL VL +LA+ +AI + L + Sbjct: 154 APVVGHVR---VVLGTARLDAEKRGV--FLTVSLLVLG---VLATAMAIAV--RLAGSVG 203 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK----N 242 E + + D V + +R + R E FN++ + + E Q LQA+ Sbjct: 204 EPVAALVDAVGRMADGDLAARVPARARNGELKALEAGFNAMAEAIAENQRTLQARIDEAT 263 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGH 299 QL A HDPLTGLANR AF I + R++ L ++D D+FK +ND+ GH Sbjct: 264 VQLAWQARHDPLTGLANRRAFEERIEQAVRAH--RRSGDQITLFYIDLDHFKVVNDSCGH 321 Query: 300 ATGDRVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESE---VQQICSAL-TQ 353 A GDR+L E+ L G LR + +R+GGDEFA +L E + +C+A+ Sbjct: 322 AAGDRLLSELGALLK--GRLRSEDEVFRIGGDEFAAILRGCGREDARRIAEGLCAAIAAH 379 Query: 354 IFNLPFDLHNGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAKH 400 F +G + SIG A M + A+ L AD Y AKH Sbjct: 380 AFE-----SDGRAFRVGASIGLARMDPDLQEADALMIAADQACYAAKH 422 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 12/163 (7%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHAT 301 QL A HDPLT L NR + + + R+ A+LFLD D+FK +ND+ GH Sbjct: 751 QLQYNAYHDPLTSLPNRIFLLEKLEEALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIV 810 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE----VQQICSALTQIFNL 357 GD++LI IA+RL + H R GGDEF ++L ++QS E Q+I + LTQ Sbjct: 811 GDQLLIAIAQRLKTSLSVPHTLARFGGDEFTILLEEIQSTDEPLKAAQKIHNDLTQ---- 866 Query: 358 PFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAK 399 P+DL NG Q ++ SIG A++ + +++ AD MYQAK Sbjct: 867 PYDL-NGQQVFISTSIGIALSDPSYIHPQEILRDADTAMYQAK 908 >UniRef50_A3YEE1 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YEE1_9GAMM Length = 316 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 5/180 (2%) Query: 231 MEEWQLRL--QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDG 287 ME +QL+L + + + L +A +DP T L NRA ++ ++ N+ ++S +LF+D Sbjct: 130 MERFQLKLGDEKRQEKALLSAQYDPCTKLPNRALLFDRMDQIITNAKRDRSSFTVLFIDL 189 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK +ND +GH GD+VLI +A R+ R GGDEF ++L + +++I Sbjct: 190 DEFKNVNDCFGHDAGDKVLISVATRMQHMLRESDTVSRFGGDEFVVILPNSADCLSIKKI 249 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 AL + NLP + +G ++ SIG + EH ++L + AD MYQAK K+ Sbjct: 250 SQALIKAINLPV-IIDGQSCSVGASIGVSFYPEHGVQPKRLIKNADLAMYQAKENGRNKV 308 >UniRef50_D1CIZ8 Diguanylate cyclase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIZ8_THET1 Length = 231 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 7/157 (4%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRV 305 ALHDPLT L NRA F +N + S R+ +LFLD + FK +ND +GH TGD+V Sbjct: 63 ALHDPLTDLPNRAMFMDSLNRAL--SHGRRHGHPVGILFLDLNGFKQVNDMYGHETGDQV 120 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L A+RL R GGDEFA++L D+ SE ++ +I L + + P LH+ Sbjct: 121 LRVAAERLRLSVRPEDMVSRYGGDEFAILLSDITSEEQLAEIAQRLVRRLSAPIRLHD-R 179 Query: 366 QTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 ++ SIGYA+ + SAE+L AD +MY+ K Q Sbjct: 180 DVALSASIGYALGSPAEVSAEELVRRADLHMYREKVQ 216 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 3/162 (1%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 A+L+ A HDPLTGL NRA F + L + A+LF+D DNFK++ND+ GH Sbjct: 650 EARLVHLAFHDPLTGLPNRALFMDRLEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHE 709 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GDR+L +A+RL+ RLGGDEF ++L + E ++ + ++ PF Sbjct: 710 AGDRLLALVARRLSGATRPGDTVARLGGDEFTVLLEGIADGGEAARVAGRVAEVLREPFR 769 Query: 361 LHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 + G + ++ S+G ++ T S E+L AD MY+AK + Sbjct: 770 V-AGRELFVSASVGISVSTAGSGSVEELMRGADLAMYEAKRE 810 >UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MF6_RHOP5 Length = 802 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%) Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 RI E + + ++++ EW+ + Q + A L R HD LT L NR FR I+ ++ Sbjct: 343 RITEQPLPGTGWVTTIEDVTEWR-KTQERIAHLAR---HDALTDLPNRTTFREEIDRVLR 398 Query: 273 NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFA 332 + +A+L++D D+FK IND+ GH GD +LIE+A+RLA+ RLGGDEFA Sbjct: 399 YTRREVGAAVLYIDLDHFKEINDSLGHPIGDELLIEVARRLADCIRDGDLVARLGGDEFA 458 Query: 333 MV-LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQEL 390 ++ + + ES+ + + I + P++L GH ++ S+G A+ AS ++L + Sbjct: 459 VIQISHHEPESDAAALAMRIVSIISTPYEL-QGHHVSIGASVGIALAPTDASEPDELIKK 517 Query: 391 ADHNMYQAKHQ 401 AD +Y+AK + Sbjct: 518 ADLALYRAKAE 528 >UniRef50_Q3SP91 Diguanylate cyclase/phosphodiesterase n=13 Tax=Bradyrhizobiaceae RepID=Q3SP91_NITWN Length = 658 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWG 298 +A +L R A D LTGL R N+L+ + A+ FLD DNFK+IND +G Sbjct: 197 KAVEEELFRCAYFDDLTGLPTRRVIEQHANSLIREGEQPVRFAVAFLDIDNFKHINDYYG 256 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 HA+GD +LIE+A+RL+ GLR R+ GDEF ++L VQS++E+ L Q Sbjct: 257 HASGDELLIEVARRLSF--GLRGTDMLSRISGDEFLLLLNPVQSDAELADYIGFLLQRLK 314 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 PF + G + + SIG ++ +H S E L++ AD MY K+++ Sbjct: 315 APFFIE-GSELFASASIGVSIYPDHGDSYEVLRQNADTAMYHIKNEK 360 >UniRef50_C0GSA0 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSA0_9DELT Length = 425 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 6/163 (3%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRV 305 A++D LTGL NR F + ++ S AR+ +L+LD D FK IND GHA GD V Sbjct: 259 AMYDSLTGLGNRNLFMDRLEHVL--SQARRYGNFVGMLYLDLDGFKEINDRLGHAAGDEV 316 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L+E A+R+ RLGGDEFA++L +++ E +++ + + +N FD G Sbjct: 317 LVETARRIKSCLRESDIPARLGGDEFAVILPQMKNPREAEEVAGKILEKWNPQFDTSAGK 376 Query: 366 QTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKLV 407 M +S G A EH ++L AD MYQAK + V Sbjct: 377 AVNMNISAGLAAFPEHGDTLDRLVNTADKAMYQAKKTKGPSFV 419 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/183 (39%), Positives = 93/183 (50%), Gaps = 23/183 (12%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 L+ + +L A DPLT L NR +F +N ++ S T SALLF+D DNFK IND+ Sbjct: 138 LKRQEDRLRYLAYFDPLTSLPNRRSFNEQLNRILKRSQRLNTFSALLFIDLDNFKRINDS 197 Query: 297 WGHATGDRVLIEIAKRL-------------------AEFGGLRHKAYRLGGDEFAMVLYD 337 GH GDR+L+EI+KRL E G A RLGGDEF +VL D Sbjct: 198 IGHGRGDRLLVEISKRLINELREDDAISYYSDSSAEEEHDGNTEIA-RLGGDEFTVVLAD 256 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMY 396 V +V++I + + + P L H +T SIG AM + AE L AD MY Sbjct: 257 VLHTDDVERIALRIMKTLSEPIPLQT-HNPVVTPSIGIAMYPQDGEDAESLVRNADTAMY 315 Query: 397 QAK 399 AK Sbjct: 316 AAK 318 >UniRef50_A8ZW17 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZW17_DESOH Length = 409 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 13/166 (7%) Query: 244 QLLRTALHDPLTGLANRAA-FRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 +LL A HD LTGL NR A F T+ R+ ALLFLD DNFK +NDTWGH TG Sbjct: 231 ELLYLASHDHLTGLYNRGALFEKLRETIAYAKRFRQRCALLFLDLDNFKTVNDTWGHETG 290 Query: 303 DRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESE---VQQICSALTQIFNL 357 DRVL E A RL G LR Y R GGDEF ++L + ++ + Q++ A+++ Sbjct: 291 DRVLKEAAFRLT--GLLRETDYVCRHGGDEFTIILSNSKNMNPPKVAQKVIDAISR---- 344 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 PFD+ +T SIG ++ + + + E L + AD MY+AK ++ Sbjct: 345 PFDVGENKIAAITTSIGISVYPDDSDTMEDLVKYADKAMYRAKDRK 390 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 3/167 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 QL R A DPLTGLANRA F + + + L S A+LFLD D FK +ND GHA G Sbjct: 479 QLTRQAFSDPLTGLANRALFANRVEHALSERSRQPGEVAVLFLDLDGFKGVNDAQGHAVG 538 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D +L +A RL RLGGDEFA+++ Q+E+ + + + PF L Sbjct: 539 DHLLTLVADRLRRCVRPSDTVARLGGDEFAILVVGPQAEAHGVDVAERVQRALAEPF-LL 597 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 +G + T+ SIG A+T + + ++L AD MY+AK R VR Sbjct: 598 SGREVTLAASIGIAVTDDGTETVDQLLRNADLAMYRAKSSRKGTYVR 644 >UniRef50_B2JQP4 Diguanylate cyclase n=2 Tax=Burkholderia RepID=B2JQP4_BURP8 Length = 505 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYIND 295 L+L QL R A D LTGL+NR ++ + DA A +F+D D FK +ND Sbjct: 328 LKLLKGREQLHRLAHTDRLTGLSNRGCIMDLLDEAVAAPDAVGRVAAIFVDLDRFKELND 387 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GH GD +L+EIA+RL E R + RLGGDEF +V D E+ + I A+T Sbjct: 388 TFGHHLGDTILVEIARRLKEVAQGRAQTGRLGGDEFLVVSGD--GEASARIIAEAITAAL 445 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQ 401 P +H GH + S+G A+ A L + AD MY+AK + Sbjct: 446 ESPVVVH-GHAYRVCASLGIAVLQRGERAADLVKAADRVMYEAKER 490 >UniRef50_A3V376 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V376_9RHOB Length = 597 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 4/156 (2%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 L + A HDPLT L NR AF + + +D R ALL LD D FK++NDT GH +GD Sbjct: 153 LEQAAYHDPLTELPNRRAFERALEHCLGAADGR--VALLHLDLDRFKWVNDTLGHQSGDA 210 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 VL+ A+R+++ G R + YR+GGDEF ++L S + Q +A+ + P DL Sbjct: 211 VLVTAAQRISQAVGNRGQTYRVGGDEFMVLLTQGISANLAHQTGTAIVKALTRPIDLAQ- 269 Query: 365 HQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAK 399 Q T+ +SIG A + +A + AD +Y+AK Sbjct: 270 RQVTIGISIGIATGVAGQDTAATVIAHADVALYEAK 305 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHAT 301 ++L ALHD +TGLANR + + R S A+LFLD D FK IND+ GH Sbjct: 390 KILHDALHDAMTGLANRVLLIDRLTQAIARRQRRPNSLFAVLFLDVDRFKVINDSLGHLA 449 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD++LI I +RL RLGGDEFA++L D+ ++ ++ + + PF L Sbjct: 450 GDQLLIGIGQRLRACTRPEDTIARLGGDEFAILLEDLSDPAQAMKVAERILMVLGRPF-L 508 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 GH+ T SIG A E + +AE L AD MY+AK Sbjct: 509 LEGHEIFTTASIGIAFPWEDSQTAEDLLRDADTAMYRAK 547 >UniRef50_C6HW67 Putative diguanylate cyclase/phosphodiesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW67_9BACT Length = 1369 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 9/175 (5%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 L+ +N +L + HDPLTGL NR A + ++ T A+ +D D+FK +NDT Sbjct: 887 LEEQNERLAFLSRHDPLTGLTNRTALEEHLERTLSREMRNGTPFAVGMIDLDDFKPVNDT 946 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 WGH TGD++L EIA+RLA G LRH A RLGGDEF +V+ +++ + L +I Sbjct: 947 WGHQTGDQLLREIARRLA--GALRHHDLAVRLGGDEFVVVVENLEGGERSPAFPALLDRI 1004 Query: 355 ---FNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEK 405 PF L G T + LS+G A E + E L + AD + Q K ++ E+ Sbjct: 1005 HKSLTAPFVLGEGISTRVGLSMGIAFFPEDGTTPESLLKTADTVLGQLKEKKNER 1059 >UniRef50_C8W1N2 Diguanylate cyclase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1N2_DESAS Length = 368 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 10/182 (5%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDG 287 + E+ ++L + + A D LTGL N F IN LMNNS ++TS +LLF+D Sbjct: 178 LTEFHIKLNSLYRKFRSEAKQDFLTGLNNVRGFDEEINFLMNNS--KQTSHVVSLLFIDI 235 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK INDT+GH GD +LIE+A L + + R GG+EF+++L D ++ Sbjct: 236 DFFKKINDTYGHIAGDAILIELADLLPKLCSYKDTVSRNGGEEFSIILRDCPLSKAIEVA 295 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIG---YAMTIEHASAEKLQELADHNMYQAKHQRAE 404 + I PF L N + +T+SIG Y TI+ + KL E AD ++Y+AK Sbjct: 296 ERIRSIIEKYPFKLLNNNIINITVSIGVANYPDTIDEIN--KLIEKADTSLYKAKRTGRN 353 Query: 405 KL 406 K+ Sbjct: 354 KV 355 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 207 RRVSEERIAEFH----RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 RR E + +H + ALD N+ D + R QA+ QL ALHDPLTGL NR Sbjct: 435 RRQDEFGLLAYHFNQSKMALDSNNR-DLKLQINERKQAE-YQLKHLALHDPLTGLPNRLL 492 Query: 263 FRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 F+ + + SD + A+ F+D DNFK INDT GH GD +L +++ RL+ G Sbjct: 493 FQDRLEQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTD 552 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 RLGGDEFA ++ V + + L + P ++ NG+ M SIG + + Sbjct: 553 TVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEI-NGNNINMGSSIGITIYPDD 611 Query: 382 AS-AEKLQELADHNMYQAK 399 A+ +E+L AD MYQAK Sbjct: 612 AANSEELLRNADIAMYQAK 630 >UniRef50_D1C5F0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5F0_SPHTD Length = 610 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 2/159 (1%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHA 300 AQL A HDPLTGL NR F ++ ++ +T+AL+F+D D+FK +NDT+GH Sbjct: 428 EAQLRHQAFHDPLTGLPNRTLFMHRVDLAFAEAERNGRTAALVFIDLDDFKSVNDTFGHE 487 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD +L+++ +RLA A RLGGDEFA++ DV+S ++ + L + P Sbjct: 488 VGDLLLVKVGQRLAATLRDGDIAARLGGDEFAVLFDDVESHADAVAAANRLLAALSQPIR 547 Query: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 G T+T SIG A+ S ++ ADH MY AK Sbjct: 548 -AAGRDFTVTPSIGLAVHNPGISPREMLRRADHAMYHAK 585 >UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK7_THIDA Length = 738 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LTGL NRA FR + ++ + + KT A+L LD D+FK IND+ GH GD +L+ Sbjct: 305 AYHDLLTGLPNRALFRDHLALMLAQAKRSHKTLAVLSLDLDHFKVINDSLGHTIGDELLL 364 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 + RL + RLGGDEFA++L + S +V+QIC + Q+ + P + GH+ Sbjct: 365 AVGARLRQCLREGDTLARLGGDEFAVLLPTLLSRGDVEQICRKIIQVLSRPVYV-KGHEI 423 Query: 368 TMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 +++SIG + + + L A+ MYQAK Q +L Sbjct: 424 YISVSIGACVAPDDGEMIDSLIRQAEIAMYQAKAQGRSRL 463 >UniRef50_Q21CJ3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21CJ3_RHOPB Length = 350 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 2/149 (1%) Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 D +TGLANR F+S + L +DAR ALL +D D FK +ND +GHA GD L + + Sbjct: 171 DVVTGLANRGRFQSTLAQLDEAADARPFGALLLVDLDEFKAVNDCFGHAAGDECLKQAGQ 230 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 R+++ G R GGDEFA++L Q +E+ +I ++ + P H GH+ + Sbjct: 231 RISKACGDARLVARFGGDEFAVLLGSHQRFAEISEIARSIIEEMRRPIVFH-GHELQLGA 289 Query: 372 SIGYAMTIEHASAEKLQELADHNMYQAKH 400 S+G A+ ++ +A +L +AD +Y AK Sbjct: 290 SVGVAL-VDGCTASQLFVMADKALYAAKE 317 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 +++ AQL + A +DPLTGL NR +S ++ + + + +L++D D FK +ND Sbjct: 348 QIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVND 407 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +LI++A+R+ + RLGGDEF +VL DV+ + + +L + Sbjct: 408 SLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLL 467 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 PF L +GH+ + SIG ++ E AS A +L + +D MYQAK + Sbjct: 468 TSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKE 514 >UniRef50_Q72F59 Sensory box/GGDEF domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72F59_DESVH Length = 607 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 7/167 (4%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATG 302 L R + DPLTGL NRA + ++ + + +T LLF+D D FK +NDT+GHA G Sbjct: 434 DLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVG 493 Query: 303 DRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 D +L ++A RL LRH A RLGGDEFA++L+DV + V++I + + I F Sbjct: 494 DTLLQQVAGRLRRR--LRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFT 551 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +++ SIG ++ +HA A L LAD MY+AK + ++ Sbjct: 552 CTD-IPCSVSASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRM 597 >UniRef50_A1TB70 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Mycobacterium RepID=A1TB70_MYCVP Length = 850 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 5/163 (3%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSA---LLFLDGDNFKYINDTWGHATGDRV 305 ALHDPLTGLANR + + + + + R LLFLD D FK +NDTWGHA GD V Sbjct: 681 ALHDPLTGLANRTLLMNRMEQALAD-EGRHVPGRVGLLFLDLDGFKPVNDTWGHAAGDEV 739 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L +A+R+ A RLGGDEFA++ + E+ + + + P L G Sbjct: 740 LKAVARRIENSIRPGDTAARLGGDEFAVLCPVIGENGELHGVAERIQTELSRPLTLIGGQ 799 Query: 366 Q-TTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 ++ S+G AM+ +AE+L AD MY AK Q LV Sbjct: 800 SYDQLSASVGVAMSGCGRTAEELLHHADRLMYHAKRQGNGGLV 842 >UniRef50_A6AUF3 Sensory box/ggdef family protein n=3 Tax=Vibrio harveyi RepID=A6AUF3_VIBHA Length = 539 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 2/168 (1%) Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKY 292 +QLR + N ++ A HD LTGL NRAAF+S + ++ A + L++LD D+FK+ Sbjct: 361 FQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASEVLAQCLKAGREVCLIYLDLDSFKF 420 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 IND +GHA GD+ L +A + G + RLGGDEFA++L + + + S+L Sbjct: 421 INDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI 480 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAK 399 Q+ P ++ +T SIG E + + ++L AD MY+AK Sbjct: 481 QLIQDPIEVRPDVYHQVTTSIGGCYAKETNCTLDELMHQADMAMYEAK 528 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 4/164 (2%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWG 298 K A+L R A +DPLT L NR F + + ++ + R+ A+ FLD D FK +ND+ G Sbjct: 272 KEAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLG 331 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD L IA+RL+ RLGGDEFA++L ++ + V +I L ++ + P Sbjct: 332 HLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLSAP 391 Query: 359 FDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 F L H+ T SIG A+ T + E + AD MYQAK Q Sbjct: 392 FTLKQ-HELFTTASIGIALGTSYYEQPEAILRDADIAMYQAKTQ 434 >UniRef50_B1YIG1 Diguanylate cyclase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YIG1_EXIS2 Length = 506 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 7/176 (3%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGD 288 ++EE L+ ++ A HD LT L NR F + ++ ++ L F+D D Sbjct: 325 KVEERTAALEQALEEMEHMAYHDALTNLPNRYLFARLFKEELRRAEIHQRFVGLFFIDID 384 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQ 346 +FK +NDT+GH GD+++I+IA RL + L H R GGDEF ++L+DV+ ES+++ Sbjct: 385 HFKQVNDTYGHQIGDQLIIDIANRLEK--KLPHNTVISRQGGDEFVLLLFDVKDESDIEA 442 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQ 401 L Q+F PF L + MT SIG A+ HA++ L E AD MY+AK + Sbjct: 443 CGRQLVQLFERPFILKDT-PVFMTASIGGAVYPTHATSRTALIEQADVAMYEAKRR 497 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 86/156 (55%), Gaps = 5/156 (3%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LT LANR AF + + S K A++FLD D FK INDT GH GD +LI Sbjct: 479 AYHDTLTELANRRAFHQYVEQAIARSKISKMPFAVMFLDLDRFKVINDTLGHRVGDLLLI 538 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +AKRL K RL GDEF +++ + + +V++I + N PF++ N H Sbjct: 539 AVAKRLESIATPNMKLARLAGDEFTILIENYKKRPDVKKIADTIVAAMNEPFEIENQH-L 597 Query: 368 TMTLSIGYAMTIEHASAEKLQEL--ADHNMYQAKHQ 401 ++ SIG A+ E A + L L AD MY+AK++ Sbjct: 598 QISPSIGIAIYPE-AGEDPLSILQHADMAMYEAKNK 632 >UniRef50_Q7P1K5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K5_CHRVO Length = 180 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGH 299 + +QL A HD LTGLANR F + + D + K LLFLD D FK +NDT+GH Sbjct: 10 RESQLFHLANHDRLTGLANRNLFYDRLQHAITRLDRSGKRLGLLFLDLDRFKPVNDTYGH 69 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GDRVL IA R+ + R+GGDEF +++ D++S E ++ + L Q +P+ Sbjct: 70 VVGDRVLQLIAARIRDVIRNEDTVARIGGDEFVILMEDIESNREADKVAARLKQAIQMPY 129 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 + + H+ + +SIG A E ++L +AD MY K Sbjct: 130 QV-DQHRVLVGVSIGIAYYPEDGLLIDELLAVADRKMYGNKQ 170 >UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSP1_THISH Length = 882 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 3/165 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 R + AQ+ ALHD LTGLANR R + + + + S ALLF+D D+FK +ND Sbjct: 707 RRKEAEAQIRHMALHDNLTGLANRTLLRDRLTQAIEQARRDRNSLALLFIDLDDFKPVND 766 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GDRVL E+A+RL R+GGDEF ++L ++ E Q+ + Sbjct: 767 THGHEAGDRVLKEVAQRLRAAVRRVDTVARMGGDEFVILLQALEQEDMAIQVAEKIIDSL 826 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAK 399 + P L NG + S+G A+ H + L AD +YQAK Sbjct: 827 SRPIQL-NGQTCLLGASVGIALHPRHGEDHDGLMRAADQALYQAK 870 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 31/234 (13%) Query: 183 NGLVEALKNIT---DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQ 239 NG++ + N DV H + S + EER ++ + + N+ + ++ + RL+ Sbjct: 256 NGVITGISNYKKEMDVDHQLLSMK------VEERTSQLSKRNQELNTAVKQVTRTKNRLR 309 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWG 298 + A +D LT L NR F ++ L+ + K T ALLFLD DNFK IND+ G Sbjct: 310 -------KMAYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDSLG 362 Query: 299 HATGDRVLIEIAKRLAEF----GGLRHKA--------YRLGGDEFAMVLYDVQSESEVQQ 346 H+ GD +L E+ +RL++ + H A RLGGDEF +VL D+ + V Sbjct: 363 HSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLDAPESVGV 422 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 + L + P L +GH+ +T SIG A+ EHA+ E L +D MY AK Sbjct: 423 VAERLILALSEPM-LIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAK 475 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 A HD LTGLANR R ++ ++ + AR+ LLF+D DNFK +ND GH+ GDR+L+E Sbjct: 485 ARHDALTGLANRVVLRERLDEILPQTGARQMHCLLFIDLDNFKLVNDVLGHSFGDRLLVE 544 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A RL G + R GGDEF ++ D+++ ++ + + F + + Sbjct: 545 VAGRLRSIEGGHNIVCRHGGDEFILLAPDIRTRERAAELAERVLAVMGDAFAI-DAQAIE 603 Query: 369 MTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 + SIG ++ + + AE L AD MY+AK + Sbjct: 604 VGCSIGISVAPDDGTDAETLIRKADIAMYKAKEK 637 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 49/407 (12%) Query: 23 MTSIFITMMLIWLLLSVTSVL--------TLKQYAQKNLALTAATMTYSLEAAVVFADGP 74 M + T + + +LLS+ ++ + A++ LA+ T AV D Sbjct: 21 MNWVLFTALAVGVLLSIGQIIFESMRAVEEMDNEARQTLAIVRDPAT----QAVYSIDPD 76 Query: 75 AATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLF--------- 125 A + L L ++ A + Q LA K +T S +++ +F Sbjct: 77 LAQQVLEGLFEKPSIRYAAISHPNQTTLAELS---KPLLETQSRWMTDAIFGKEREYAIS 133 Query: 126 ---PAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL- 181 P P QP + GE+++ D++ ++F ++L L + + HL Sbjct: 134 LFRPTP--QPTYY-----GELKIVV-DTAPKSALFFERSILIFMTGLLRALLLAFVLHLV 185 Query: 182 -HNGLVEALKNITDVVHDVRSNRN------FSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 H L LK I + + + R+ ++ + + R A NSLL +EE Sbjct: 186 YHFLLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAA---NSLLQSIEEH 242 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDG-DNFKYI 293 Q + QA A++++ + +D LTGL R+ F + I +++S+A +F G D+FK I Sbjct: 243 QQKRQAAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDFKSI 302 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 N+ G++ GD++L A+RL H RLGGD+FA++L++V S V +L + Sbjct: 303 NEQLGYSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAESLLR 362 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + PF++ T ++ +IG A+ + A AEK+ + A+ M AK Sbjct: 363 EISRPFEIEE-QLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAK 408 >UniRef50_A4FNF9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FNF9_SACEN Length = 929 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 7/170 (4%) Query: 241 KNAQLLR-TALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGH 299 + A+ LR A HD LTGL NRAA + + L+ +D+ + A+LF D DNFK +ND+ GH Sbjct: 489 RAAEALRYQATHDDLTGLPNRAAVKDLLGHLLGRADSAEGVAVLFCDIDNFKRVNDSLGH 548 Query: 300 ATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GD +L+ +A+RL GGL A RL GDEF ++ D+ + V Q+ + + + Sbjct: 549 DAGDELLVALARRLE--GGLPDGCTAARLSGDEFVIICRDIGTVGGVDQLATRVAGLLRT 606 Query: 358 PFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAEKL 406 +H G ++ SIG A+ A E L AD M++AK + A K+ Sbjct: 607 AVPVH-GQLIRVSASIGAAVPNGSGAGGEDLLRFADAAMFEAKRRGAGKV 655 >UniRef50_A4VN31 Sensory box protein n=3 Tax=Proteobacteria RepID=A4VN31_PSEU5 Length = 474 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 11/168 (6%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGH 299 A+L R A +D LTGL NRA FR ++T + + R+ ALL+LD D FK +NDT+GH Sbjct: 306 ARLERMAQYDELTGLPNRACFRDRLSTAL--ARVRRNGGRIALLYLDLDQFKQVNDTYGH 363 Query: 300 ATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GD++L +A+RL G +R RLGGDEF ++L + + Q++ + + F Sbjct: 364 GGGDQLLQTVAERLG--GCVRDTDTVARLGGDEFVVLLESIIDAEDAQRVVAKIRDAFEA 421 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 P + GH + +SIG A+ E E +L + AD MY K R + Sbjct: 422 PLPI-AGHSLEIGMSIGIALYPEDGEVEAQLLKQADERMYLMKSGRGQ 468 >UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=3 Tax=Alteromonadales RepID=B4S2A8_ALTMD Length = 866 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 12/203 (5%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 R N RV +ER AE +R ++E +E +L+L + A HD LT L N Sbjct: 402 RYNVELEERV-KERTAELNRTNKFLKQQIEERKEIELKL-------IHDAHHDSLTDLPN 453 Query: 260 RAAFRSGINTLMNNSD--ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 RA F S + + + + A+LF+D D FK INDT GH GD LIE+A+R+A Sbjct: 454 RAMFTSRLELAIASKQRYSENMFAVLFIDLDRFKVINDTLGHHAGDEFLIEVARRIALCI 513 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA- 376 RLGGDEF ++L + + E +V+++ S + + PF L +G + S+G A Sbjct: 514 RGHDLLARLGGDEFVVLLDNFEDEDDVEEVASRIISSISEPF-LLDGREMYSGASVGIAH 572 Query: 377 MTIEHASAEKLQELADHNMYQAK 399 + + SA+++ AD MYQAK Sbjct: 573 IETYYRSADEVLRDADAAMYQAK 595 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 L+ A++ + A HDPLT L NR+ + + + RKT ALL +D D FK+IND+ Sbjct: 315 LKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKHINDS 374 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GH GD+VL+ +++RLA G R+GGDEF + L V+ ++ I SA+ + F+ Sbjct: 375 FGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVL-LTQVRRRDDIPVILSAIQRAFD 433 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 FD G ++ SIG A+ + + + L + AD MY+AK Q Sbjct: 434 TSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQ 479 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 6/173 (3%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDG 287 +++ EW L QAK + + R HD LTGL NR F + + + + A+L LD Sbjct: 356 FEDITEW-LEAQAKISHMAR---HDALTGLPNRVLFHEQLEQGLRRTGSGDQLAVLCLDL 411 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D+FK IND+ GH GD +L E+ +RL G RLGGDEFA+V E+ + + Sbjct: 412 DHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVARLGGDEFAVVQIGRSEEAAARCL 471 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 L ++ + P+++ + HQ + +SIG +++ + S A++L + AD +Y+AK Sbjct: 472 AGRLVEVISAPYEIDD-HQIVIGVSIGISLSPQDGSNADELLKNADLALYRAK 523 >UniRef50_A8G0F6 Diguanylate cyclase/phosphodiesterase n=9 Tax=Shewanella RepID=A8G0F6_SHESH Length = 828 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/287 (30%), Positives = 137/287 (47%), Gaps = 21/287 (7%) Query: 123 WLFP------APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGC--ILLASGIA 174 W+FP +P I I N + + L S+ + F+L VL+GC IL+A Sbjct: 260 WIFPLAEEANSPAILVI--NNISDWQAILNEFQESMLGTLLFAL-VLSGCLVILVAWAPV 316 Query: 175 ITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 ++L+RH + L+ L HD + + S + S + E + L + ++ Sbjct: 317 VSLSRHAN--LLPLLAE-----HDFETLKKLSPKSSSLIVDEVDLINTATHQLAERLQNL 369 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYI 293 +L + +L R A+ D LTGL N+A + T+ AL++LD D FK I Sbjct: 370 ELEVDEYTCELKRLAMLDTLTGLPNKAMLMHELKKTIACVGRIHDQVALMYLDLDEFKRI 429 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 NDT GH GD +L +A RL +R GGDEF ++L ++S+ +V+++ + Sbjct: 430 NDTLGHTQGDELLKIVATRLNNSVRAMDTVFRQGGDEFLILLRGIRSDQDVRKVIHKIFA 489 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAK 399 P L N H+ +T SIG A + AE+L + AD MYQAK Sbjct: 490 SLQQPVVLGN-HKLIVTTSIGVAYCKSMNVRAEELIKYADLAMYQAK 535 >UniRef50_D0I965 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I965_VIBHO Length = 434 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 7/182 (3%) Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALL 283 ++L E++E +L+A++ +L R A D LTGL NR AF S + M ++ +ALL Sbjct: 243 DALQREVDEQTRQLKAQHDELRRVANTDGLTGLLNRRAFESQVTLAMTRAEVSGNHAALL 302 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 F+D ++FK +NDT+GH GD +L +A RL + RLGGDEF + L + Sbjct: 303 FIDLNDFKAVNDTFGHEAGDLLLNAVADRLRQVVRATDLVARLGGDEFIVWLNLLGDNGN 362 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAKH 400 V S + I + P H G ++ LS+G A+ EH KL EL AD MY+AK Sbjct: 363 VDTAVSRIRAIIDSPILFH-GEPISIKLSVGVALFPEH--GRKLDELMKKADEAMYKAKE 419 Query: 401 QR 402 ++ Sbjct: 420 EK 421 >UniRef50_A3Y765 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y765_9GAMM Length = 672 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 12/162 (7%) Query: 252 DPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 D LTGL NRA F + N L+ + + AL++LD DNFK INDT GH+ GD +L E++ Sbjct: 254 DHLTGLPNRAYFHELMANQLVKSCKEKSQCALMYLDLDNFKRINDTLGHSVGDSLLKEVS 313 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL-----HNGH 365 + +++ G ++ RLGGDEF +++ + SE++++ A+ +PF + H G Sbjct: 314 QVISKVIGAKNTLARLGGDEFVVMVPCFKQISELEEVAQAIVDALKVPFVIGANLVHTGA 373 Query: 366 QTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 SIG A++ S E++ L+D MY+AK Q + V Sbjct: 374 ------SIGIALSRNVESVEEILRLSDLAMYKAKEQGKGRFV 409 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 4/165 (2%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDT 296 L+ N QL R A+HD LTGL NR + + ++++ R+T AL+++D D FK +ND Sbjct: 242 LRQANDQLARLAMHDALTGLPNRMQLERELESCLHHARQHRQTFALMYMDLDGFKIVNDA 301 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 WGH GD++L + RL E+ G R+GGDEF +++ D E + + L Q Sbjct: 302 WGHYLGDQLLAGVTTRLREYLGPGMTLARIGGDEFVLLMRDC-GEEQAAALADKLVQAIE 360 Query: 357 LPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKH 400 PF +G+ +TLS+G ++ + A++ L+ AD MY K Sbjct: 361 QPFH-QSGYTLRVTLSVGISLFPRDGATSHDLRLNADTAMYSIKQ 404 >UniRef50_B0C776 Diguanylate cyclase/phosphodiesterase with EAL and GAF domains n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C776_ACAM1 Length = 755 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 91/169 (53%), Gaps = 8/169 (4%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAF----RSGINTLMNNSDARKTSALLFLDGDNFK 291 L+ K +LL A HDPLT L NRA F + L D A+LFLD D FK Sbjct: 307 LKHHQKETELLHHAFHDPLTDLPNRALFINRLEQSLKQLQRYPD--YLFAVLFLDLDRFK 364 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 IND+ GH GD++L+ IA+RL A RLGGDEF ++L +Q++ + L Sbjct: 365 IINDSMGHGVGDQLLMGIAERLLSSLRPGDTASRLGGDEFVILLNGLQNQEDATSTAERL 424 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAK 399 Q LPF+L H+ + +SIG ++ + AE++ + AD MYQAK Sbjct: 425 RQQLTLPFNL-GVHEIFIDVSIGITLSNFGYHDAEQVLQDADVAMYQAK 472 >UniRef50_B5YAD1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=B5YAD1_DICT6 Length = 471 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 129/265 (48%), Gaps = 22/265 (8%) Query: 143 VRLTARDSSISHFIWFSLAVL---TGCILLASGIAITLTRHLHNGLVEALKNITDVVHDV 199 + + +D S+ F L +L G ILL S I + L N + + + + D+ H++ Sbjct: 220 IVIDKQDPSLYEFNKLLLTILGISLGVILLFS---IVFMQILLNHIFKPFERLVDISHNI 276 Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +N + + E+R EF F F ++ +++E + +L + + + DPLT L N Sbjct: 277 -ANGKYDVELMEDREDEFGDFIKVFKHMISKIKEREEKLIFELKETEKLTYLDPLTRLYN 335 Query: 260 RAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGL 319 R + N D T L+F+D DNFK IND WGH GD+VLIE+ AEF Sbjct: 336 RRFLEEKYGYIKRNYD---TFVLVFVDLDNFKEINDRWGHELGDKVLIEV----AEFFRR 388 Query: 320 RHKAY----RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGY 375 + Y R GGDEF ++L +V E + ++I + F + ++ N ++ + G Sbjct: 389 NFREYDFVVRYGGDEFCIILVNVDKE-KAERILERIKNKFEI--EILNFFGFNLSFTYGV 445 Query: 376 A-MTIEHASAEKLQELADHNMYQAK 399 A + S + L ++AD MY+ K Sbjct: 446 AEYPKDGESLDTLVKIADERMYKHK 470 >UniRef50_B7DUZ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUZ0_9BACL Length = 493 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATG 302 +L R A D LT L NR F + + ++ R + A+ LD D FKY+NDT+GH G Sbjct: 255 ELQRLAFTDALTRLPNRQQFEHDLRAAVEQAERRGEKVAVFLLDFDGFKYVNDTFGHQFG 314 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D L IA+RL + R K YR+GGDEF ++ + E++V++ + + F P ++ Sbjct: 315 DATLKAIAERLQKALCGRAKVYRMGGDEFTVIQAGIAGEADVRETAARCVEAFREPLEVM 374 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 G + +SIG A+ +H+ + L AD +MY AK Q +L Sbjct: 375 -GESVPLGISIGAAIYPDHSRDVDALLRYADISMYAAKEQGGHRLC 419 >UniRef50_Q15PZ1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Gammaproteobacteria RepID=Q15PZ1_PSEA6 Length = 569 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM-NNSDARKTSALLFLDGDNFK 291 E + R+ ++ + A DPLTGL+NR F + ++ +N ALL LD DNFK Sbjct: 126 EIEQRMHMSYLEVKKMAEMDPLTGLSNRYHFEETLKVMIASNKRDGSNVALLALDLDNFK 185 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 ++NDT GH GD VL + KR+ RLGGDEFA++L D+ +V I + + Sbjct: 186 HVNDTMGHEAGDSVLKQSVKRIRSCLRNNEGFARLGGDEFAIILGDIARVEDVNNISNRV 245 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKH 400 F PF++ G + +SIG A+ ++ ++ L + AD MY+AK Sbjct: 246 LNSFKQPFNIQ-GKEFVCGVSIGVALCPVDSGDSQALLKCADIAMYRAKQ 294 >UniRef50_A6WG69 Diguanylate cyclase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WG69_KINRD Length = 613 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 8/155 (5%) Query: 249 ALHDPLTGLANRA----AFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 ALHDPLTGL NR R ++ + D ALL+ D D+FK +NDT GHA GD Sbjct: 439 ALHDPLTGLPNRTLLEDRLRHALSAAHRSGD---RVALLYCDLDDFKPVNDTGGHAAGDH 495 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 VLI +A+RL+ R+GGDEFA+V D+ E+ + + + PF + G Sbjct: 496 VLIAVAERLSAAVRPGDTVARIGGDEFAVVCPDLPDEAAAAVVAGRIVEAMAEPFPV-AG 554 Query: 365 HQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + + +S+G AM A ++ + AD MY+AK Sbjct: 555 WEFRVGISVGLAMAGSRTDAARVLQQADAAMYEAK 589 >UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDW9_THET1 Length = 718 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 7/158 (4%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 LLR ALHDPLTGL NR + L+ ++ +R A+LFLD DNFK +ND GH GD Sbjct: 289 LLRQALHDPLTGLPNRVMLGQQLEKLLASNRSRSI-AVLFLDLDNFKAVNDNLGHQAGDS 347 Query: 305 VLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 +L+ +A+RL+ LR A R GGDEF +V+ V+S V I + + + PFD+ Sbjct: 348 LLVAVARRLS--ANLRPTDFAARFGGDEFTVVVTKVKSIDYVVSIAKRIIESISQPFDIA 405 Query: 363 NGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAK 399 G + + SIG A+ SA L AD +Y++K Sbjct: 406 -GERVYTSTSIGIALCSSSEDSASSLLRKADIALYKSK 442 >UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5W2K6_SPIMA Length = 612 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 10/168 (5%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAF----RSGINTLMNNSDARKTSALLFLDGDNFKYIN 294 Q ++ +L+ A HD LTGL NR F + I+ N D LLF+D D FK IN Sbjct: 166 QNQHNRLIYEANHDSLTGLYNRGYFITELQKAIDRTQNCQDY--LFGLLFMDVDRFKLIN 223 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D++GH GD++LIEI RL + R GGDEFA+++ D+Q SE+ Q+ + + Q Sbjct: 224 DSFGHQAGDQLLIEIGDRLQSCIRPQDILSRWGGDEFAIIIDDIQDLSEISQLTNKIQQT 283 Query: 355 FNLPFDLHNGH-QTTMTLSIGYAMTI--EHASAEKLQELADHNMYQAK 399 P L H +T +LSIG A++ + SA+ L++ AD +Y+AK Sbjct: 284 IKKPIILGEDHLETVTSLSIGIALSSMGYNCSADMLRD-ADTALYRAK 330 >UniRef50_C6HZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZW1_9BACT Length = 1992 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 10/162 (6%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 ALHD LTGL NR A + + + +D KT A+ LD D+FK +NDTWGH GD +L Sbjct: 1119 ALHDSLTGLPNRRALDATLERTLARADRTKTPLAIAILDLDDFKPVNDTWGHPAGDALLR 1178 Query: 308 EIAKRLAEFGGLRHKAY--RLGGDEFAMVL---YDVQSESEVQQICSALTQIFNLPFDLH 362 EIA R + LR + R+GGDEFA++L D+ E +V + + + PF++ Sbjct: 1179 EIAARFS--ASLRGGDFLARIGGDEFALILDLTSDLALEDQVVAFAARIHRAVESPFEVE 1236 Query: 363 NGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAK-HQR 402 G T+ +S+G A + + + L AD +YQAK H+R Sbjct: 1237 PGQSATVGMSMGVAFFPRDGETPDALLRQADQALYQAKSHKR 1278 >UniRef50_C6AT15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Rhizobium RepID=C6AT15_RHILS Length = 783 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 10/157 (6%) Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRV 305 R A+ D LTGL NR F + ++ + +DA A LF+D D FK+IND GHA GD Sbjct: 346 RQAITDHLTGLLNRQGFEAVLDNKIAAADAAGHELACLFVDLDRFKWINDNMGHAAGDMA 405 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF--DLHN 363 LIE+ +RL +A RLGGDEFA++L +E + +C + IF PF D+H Sbjct: 406 LIELVERLKTHLAPSDEAARLGGDEFAILLPAKDAEKRAKVMCEQIASIFETPFAPDMH- 464 Query: 364 GHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAK 399 ++ S+G A+ H A+A +L + +D MY K Sbjct: 465 -----LSASVGIAIYPHHAATAAELLQKSDMAMYAKK 496 >UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VMP6_PSEU5 Length = 855 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 HD LTGL NR+ R + + + + T LL++D D FK +NDT GHA GD VLI +A Sbjct: 433 HDALTGLPNRSRLRDYLEQNLASLRSGSTLTLLYIDLDRFKPVNDTLGHAAGDEVLIGVA 492 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMT 370 RL E RLGGDEF +VL+ + ++++ ++C+ + + PF ++ Q ++ Sbjct: 493 SRLRERTRDGDLVARLGGDEFVVVLHRMGEDNDIDRLCNRIIDALSAPF-IYEDQQISIG 551 Query: 371 LSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 SIG A+ A+ A +L AD +YQAK Sbjct: 552 ASIGVALAPTDANQANELLRCADIALYQAK 581 >UniRef50_C0QBD5 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBD5_DESAH Length = 537 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 7/169 (4%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIN 294 +R ++ +L R+A +D LT L NRA F N + S K ALLF+D D FK +N Sbjct: 361 IRRKSYLIELYRSANYDKLTDLPNRAMFMDRFNEIFKQSRRYKRKLALLFIDLDGFKSVN 420 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALT 352 DT GH GD +LIE+AKRL G +R RLGGDEF ++ + S + + + Sbjct: 421 DTLGHDAGDELLIEVAKRLK--GCVRDSDVVARLGGDEFTVIFSTITSLDDPKLGAQKIL 478 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKH 400 Q PF + GH T ++ SIG ++ +H + E L + AD+ MY AK Sbjct: 479 QNLAAPFSIK-GHDTRISASIGMSIYPDHGNDIEVLLKKADNAMYLAKE 526 >UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=B4B6I0_9CHRO Length = 459 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 89/167 (53%), Gaps = 8/167 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSAL-LFLDGDNFKYINDT 296 +QAK L + AL+D LTGL NR I + + + A+ L+LD D FK INDT Sbjct: 279 IQAKQ-HLEQMALYDSLTGLDNRILLTDKITAALARAKRYQNYAVVLYLDLDGFKLINDT 337 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD+VLIE+AKRL R+GGDEF ++L DV +++ + QI + Sbjct: 338 MGHDMGDQVLIEVAKRLKMCVRQTDAVARIGGDEFVVLLQDVNHIQGAERVAQEIIQIIS 397 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAKH 400 P LHN Q + +SIG A + + L +L ADH MY AK Sbjct: 398 RPIQLHN-KQMHIGVSIGVA--VAPGNGTNLNQLLRNADHAMYHAKQ 441 >UniRef50_B1Y5M3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y5M3_LEPCP Length = 719 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 44/239 (18%) Query: 181 LHNGLVEALKNITD-----------VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLD 229 L +G + L+ +TD V DVRS+ + +A + ++D + L Sbjct: 490 LRSGRRQTLEGLTDRGGRERHLRSTYVPDVRSDGS---------VAGLYAMSMDISEL-- 538 Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLD 286 +A AQL + A D LTGLANR F ++ + AR+T+ ALL++D Sbjct: 539 ---------KAVEAQLRQLARVDHLTGLANRLQFDDRLHEALRR--ARRTALKPALLYID 587 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEFAMVLYDVQSESEV 344 D+FK IND GHA GD VL E A+RL G +R RLGGDEF ++L + + E Sbjct: 588 IDHFKGINDRHGHAAGDAVLTEFARRLK--GAVRDTDTVARLGGDEFVVLLEQLHDQDEA 645 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAKH 400 +++ S + + PFDL G T SIG + A L+ L AD +Y+AKH Sbjct: 646 RRVASKIHAVMQTPFDLAAGFLPA-TASIGVGLLTGDVDARSLKALMATADAALYEAKH 703 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 4/171 (2%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDN 289 M++ R QA + QLL+ + +D LT L NR F + ++ S+ + ++LFLD DN Sbjct: 274 MDDITQRKQA-DQQLLQVSRYDALTHLPNRILFYESLRKVIKQSEMNHRIVSVLFLDIDN 332 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK INDT G A GD +L E + RL E + R+GGDEF +L + S Sbjct: 333 FKNINDTLGFALGDELLREFSLRLLECLRVTDIVARIGGDEFGCILVSADDLGNAGLVAS 392 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 + + PFDL GHQ T+T SIG ++ I+ A+ L + D MYQ+K Sbjct: 393 KIREALRQPFDLQ-GHQVTVTASIGISVYPIDSIDADTLVKNGDTAMYQSK 442 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 12/165 (7%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLM--NNSDARKTSALLFLDGDNFKYINDTWGHAT 301 QL A HDPLT L NR + L+ N + + K+ A+LFLD D+FK +ND+ GH Sbjct: 268 QLQYHATHDPLTDLFNRNFLLEKLQNLLEKNKNQSGKSFAILFLDLDDFKVVNDSLGHLA 327 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE----VQQICSALTQIFNL 357 GD++LI I KRL G H R GGDEF ++L +++ + Q+I S LT +NL Sbjct: 328 GDQLLIMITKRLQNSLGQNHTLARFGGDEFTILLENIKETQDAIIAAQKIHSNLTYPYNL 387 Query: 358 PFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 NG Q + SIG A+ + ++ ++ AD MYQ+K Q Sbjct: 388 -----NGQQIFINTSIGIALSSPDYTHPYEILRDADIAMYQSKKQ 427 >UniRef50_Q1QUF0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF0_CHRSD Length = 836 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLDGDNFKYINDTWGH 299 K A+L R A++DPLTGL NR F + L++ S A+LF+D D+FK +NDT+GH Sbjct: 380 KQARLERRAIYDPLTGLFNREHFGDALENLLSGLSYTGIGIAVLFIDLDDFKPVNDTYGH 439 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 A GD L+ IA+RL + RLGGDEF + L ++S + +++ + P Sbjct: 440 AAGDDALVTIAQRLKQQTRSTDLVARLGGDEFVIALAGMRSAEKAEKVAFKILDDLISPI 499 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAK 399 L H T++ S+G A T + A + L AD MY+AK Sbjct: 500 ALRGEHAITLSASVGIAYTDDSRFAPDALIAAADSAMYEAK 540 >UniRef50_C9QE65 GGDEF family protein n=2 Tax=Vibrio RepID=C9QE65_VIBOR Length = 457 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 19/187 (10%) Query: 230 EMEEWQLR----LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLF 284 E+EE LR L+ K QL+ + HDPLT L NR AF + + + ++ + AL+F Sbjct: 250 ELEEEVLRQTQQLKHKQEQLIFLSEHDPLTNLVNRRAFDRQLESAIVKANRTECKLALMF 309 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSES 342 +D D+FK INDT+GH GD VLI++A+RL E +R + RLGGDEF + L + S Sbjct: 310 IDLDDFKCINDTYGHDAGDFVLIQVAERLEE--CIRESDFVGRLGGDEFVICLDLLNDFS 367 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-----ASAEKLQELADHNMYQ 397 V + + Q P H TL +G ++ + H + + L LAD MY Sbjct: 368 IVSSKVAQIEQAIREPITFHER-----TLQVGASIGVSHFPDHTKNMDALICLADEAMYN 422 Query: 398 AKHQRAE 404 AK + E Sbjct: 423 AKKTKDE 429 >UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WJ06_CHLAA Length = 845 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 6/179 (3%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTAL---HDPLTGLANRAAFRSGINTLMNNSD-ARKTSAL 282 L+++ E+ L ++A L + A HD LTGL NR F + + ++ A A+ Sbjct: 390 LIEQFEQLSLIALEQHATLHKLAYQAHHDALTGLPNRLLFEDRLQQAIEHARRANTMVAV 449 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 LF+D D FK++NDT GH TGD +LI++A+R R GGDEF +VL D+ S Sbjct: 450 LFIDLDRFKHVNDTLGHTTGDMLLIQVARRFEACIRATDTIARHGGDEFLLVLSDITSPQ 509 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKH 400 +V + L + + PF NGH+ ++ SIG ++ I+ LQ AD MY+AK Sbjct: 510 QVTHVVRRLHEALDQPF-FVNGHEIFVSASIGASLYPIDGTDVIALQRAADVAMYRAKQ 567 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 2/163 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGDNFKYINDTW 297 +A +L R A +DPLT L NR S + + ++T A LFLD D+FK+IND+ Sbjct: 384 KAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSM 443 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++L ++A RL + L R+GGDEF ++L DV S+ + + + +F Sbjct: 444 GHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQ 503 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 PFDL N ++ SIG A+ +E L + AD MY AK Sbjct: 504 PFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAK 546 >UniRef50_A1WTB0 Diguanylate cyclase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTB0_HALHL Length = 636 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 7/163 (4%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATG 302 Q+ ALHD LTGLANRA + + R+ ALLF+D ++FK IND GH G Sbjct: 442 QMRHMALHDHLTGLANRALLLDRLEKALEWARRNREAVALLFIDLNHFKPINDEHGHEVG 501 Query: 303 DRVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 DRVL ++A+RL G +R R GGDEF ++L V +++ + + P Sbjct: 502 DRVLQQLARRLT--GAVREVDTVARHGGDEFVILLEGVDGRRAAERVAENIVASLDEPV- 558 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 + NG + ++LSIG A+ EH SA++LQ +AD MY AK R Sbjct: 559 IVNGRRFQVSLSIGIAIYPEHGVSADELQRVADDAMYVAKADR 601 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 7/191 (3%) Query: 215 AEFHRFALDFN---SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 +E RF DF+ S+ M + A++ A HDPLTG+ANRA + M Sbjct: 293 SEGSRFQPDFSEFVSIAVHMAGIAISRHRAEARIGFLADHDPLTGMANRALLDRKLTFAM 352 Query: 272 NNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 +D+ R AL FLD DNFK +ND+ GH+ GD++L +A R++E + R+GGDE Sbjct: 353 QTADSTRSEVALAFLDLDNFKLVNDSLGHSVGDQLLKIVASRISELTSDQGSLARIGGDE 412 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQE 389 F ++L + ES + ++ SA+ + P L N + +T SIG A H S A +L Sbjct: 413 FVIILEQMDLESCLDRL-SAIREAVTRPIVL-NDIELRVTCSIGVASYPSHGSTAGELLA 470 Query: 390 LADHNMYQAKH 400 AD MY+AK Sbjct: 471 SADMAMYRAKE 481 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 223 DFNSLLDE-MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS--DARKT 279 + N+ L+E +E L+A + QL ALHD LTGL NRA F ++ + S Sbjct: 324 ELNAQLEERVEARTAELEALSRQLQHDALHDSLTGLPNRALFSDRLSQAIARSKLPGGPQ 383 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 A+LFLD D FK INDT GH TGD +L+E+A+RL RLGGDEF ++L +Q Sbjct: 384 YAVLFLDVDRFKGINDTLGHPTGDAMLVEMARRLRACLRATDTVARLGGDEFTILLEPLQ 443 Query: 340 SESEVQQICSALTQIFNLPFDLHNG---------HQTTMTLSIGYAMT-IEHASAEKLQE 389 S + Q+ + + P + HQ TM+ S+G + ++ SA + Sbjct: 444 STEQAAQVAARIQDALRRPMQMPAAGPGGLPGGWHQVTMSASLGIVHSQPDYDSAMAVLR 503 Query: 390 LADHNMYQAK 399 AD MY+AK Sbjct: 504 DADIAMYRAK 513 >UniRef50_Q89G51 Bll6496 protein n=3 Tax=cellular organisms RepID=Q89G51_BRAJA Length = 1137 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 116/218 (53%), Gaps = 18/218 (8%) Query: 194 DVVHDVRSNRNFS-----RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ-LLR 247 DV DV ++N R +++ R+ R + L E+ R A+N + + Sbjct: 650 DVAPDVYLSQNVKQLSEIRELADGRVVAIARHMMQDGGWLTTHEDITDR--ARNEKRIAY 707 Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVL 306 A HD LTGLANRA F ++ S T+ ++L LD D FK +NDT GHA GD++L Sbjct: 708 LAQHDLLTGLANRAVFSEKLDDAAKRSQRHGTTFSVLMLDLDRFKAVNDTLGHAAGDQLL 767 Query: 307 IEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQI--FNLPFDLH 362 +E+A+RL+ LR RLGGDEFA++ + +++SE I AL I P DL Sbjct: 768 VEVARRLSS--SLRDTDVLARLGGDEFAIIQENEKNQSE-GAIALALRIIGLIEQPVDL- 823 Query: 363 NGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAK 399 +GH+ ++ S+G A EH A AE L + AD +Y K Sbjct: 824 DGHRVSVGTSVGIAFAPEHGADAETLLQKADVALYATK 861 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 94/163 (57%), Gaps = 8/163 (4%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATG 302 QL R A +D LTGL NRA F S ++ ++ SD RK ALLFLD D FK +ND+ GH G Sbjct: 270 QLTRLAQYDCLTGLPNRALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVG 329 Query: 303 DRVLIEIAKR--LAEFGGLRHKAYRLGGDEFAMVLYDVQSES-EVQQICSALTQIFNLPF 359 D +L ++A+R LA G RLGGDEF ++L +V SES + ++ + + PF Sbjct: 330 DLLLQQVAQRLQLATLEG--GTVSRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAPF 387 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQ 401 ++ G + ++ SIG A+ + L + AD MY+AK Q Sbjct: 388 NIL-GREVLISTSIGIALCSGSTQCIDSLLKRADMAMYRAKEQ 429 >UniRef50_Q1N132 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N132_9GAMM Length = 664 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 95/170 (55%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTW 297 +A +L + A HD LTGLANR F + +N ++ +D + K ALLF+D D FK IND + Sbjct: 487 KALENRLQQMAHHDALTGLANRTLFENQLNQAISRADRQNKKVALLFIDLDRFKPINDEY 546 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++L +A+RL R+GGDEF M++ D+ + ++ + + + Sbjct: 547 GHEMGDKLLRIVAERLESRTREHDTVARIGGDEFVMIIEDISDMNSIESVAQQVVSLLCS 606 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 P + +G + ++ SIG ++ +H ++ +L AD MY AK Q ++ Sbjct: 607 PIVI-DGIEISVGCSIGISLYPDHGTSSIELTRSADIAMYAAKSQSEKRF 655 >UniRef50_A8M1C9 Diguanylate cyclase n=2 Tax=Salinispora RepID=A8M1C9_SALAI Length = 215 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 4/163 (2%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTW 297 LQA+ A A HDPLTGL NR AF L+ +D+R A++ LD D+FK IND + Sbjct: 37 LQAELAAERHAASHDPLTGLPNRRAFHRLAAALLTRADSRPLIAVV-LDLDDFKQINDRY 95 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE-VQQICSALTQIFN 356 GHA GD+VLI +A+RL+ F G RLGGDEFA +L E ++ L + Sbjct: 96 GHAAGDQVLINVAQRLSAFAG-DDPVARLGGDEFAGLLTAPDIERRWLEHATRRLQNLLA 154 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 P LH + +T S+G A + + AD MY+AK Sbjct: 155 APIPLHRAN-VRVTASVGLAPVSCPTQLSEALDRADAAMYRAK 196 >UniRef50_A5F8F8 GGDEF family protein n=28 Tax=Vibrio RepID=A5F8F8_VIBC3 Length = 443 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 126/270 (46%), Gaps = 33/270 (12%) Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 ++++H + FS V C GIA+ + R +G K + + + + SR Sbjct: 169 TTMAHLLLFSSVV---C-----GIALVVLRRFRHGC----KTLQEGIEQMAKGDLASRIS 216 Query: 210 SEERIAEFHRFALDFNSLLDEME-------EWQLRLQAKNAQLLRT-------ALHDPLT 255 ++ EF + FN + ++ E Q + K A+L R + D LT Sbjct: 217 TQNNEQEFVQLTQFFNQMKASLQSTTVTKDELQAEVARKTAKLERQKAELRFLSERDSLT 276 Query: 256 GLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 G+ NR AF+ ++ L+ + ALLF D D FK INDT GH GD VL EIA+RL Sbjct: 277 GILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLK 336 Query: 315 EFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLS 372 G +R + RLGGDEF + L +Q S V + + P L N + +S Sbjct: 337 --GSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEKLQKPLQL-NQESLEIGVS 393 Query: 373 IGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 IG A+ E A+ +L +AD MY AKHQ Sbjct: 394 IGVALYPEQATQVPELLRIADEAMYTAKHQ 423 >UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY77_BACS4 Length = 886 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 5/180 (2%) Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSAL 282 N++ E+EE LQ +L + A +D LTGL NR F+ + +L+ + +K T A+ Sbjct: 438 NNMNKELEEQAGMLQKSEEKLQKLAYYDMLTGLPNRQHFQKYLESLLQSEANKKAPTIAV 497 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +F+D + FK INDT GH GD +L ++ +L + + K +RLGGDEF +VL + + Sbjct: 498 MFVDLNQFKQINDTLGHKVGDELLKLVSNKLMKLEKEKIKVFRLGGDEFVIVLTEA-DKK 556 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 EV++ L ++F P L+N +T S G +M + + ++L AD MY AK + Sbjct: 557 EVKRFGGKLQRLFAEPIILNN-MSLYVTASFGVSMYPKDGDTLDRLVRFADMAMYNAKEK 615 >UniRef50_C3JNF1 Sensory box/ggdef family protein n=2 Tax=Rhodococcus erythropolis RepID=C3JNF1_RHOER Length = 734 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 9/170 (5%) Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN---SDARKTSALLFLDGDNFK 291 +++LQ+ +++R D LTG+ NR +F + + L+ + S+ R AL LD DNFK Sbjct: 304 EVKLQSD--EIVRMGRVDALTGMPNRHSFWTELERLLCDPYTSEGRL--ALAMLDLDNFK 359 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 +NDT GH GD VL E+A RL+E GG+ RLGGDEFA++ DV S+V+ + Sbjct: 360 SVNDTLGHTVGDAVLREVADRLSEAGGMSQLFARLGGDEFAILFTDVGDSSQVRTLLGRY 419 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKH 400 + P + G + + SIGY + E +SA+++ AD ++ AK Sbjct: 420 IETLQEPITV-AGTRLEIGCSIGYYLPDELQSSADEMMGAADLALFAAKE 468 >UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TF3_RHOFD Length = 572 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 117/241 (48%), Gaps = 16/241 (6%) Query: 167 ILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNS 226 IL+ +AI L + ++ L+ + D + S + +S R E A N Sbjct: 328 ILVLGVLAILLAALVSRAVIGPLRKMVDAM-SAFSKEHVVNELSAARKDEIGLLASSLND 386 Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFL 285 + + + L+ L A HD LTGL NRA F + ++ + KT ALLF+ Sbjct: 387 MQNIIVANMRDLKESRQALEHLAQHDSLTGLPNRALFDDRLRQAVSQARRDKTRMALLFV 446 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESE 343 D D FK INDT GH GD +L AKR+ +RH R+GGDEF ++L V+ + + Sbjct: 447 DLDAFKDINDTCGHHVGDLLLNAAAKRMQAC--VRHADTVGRMGGDEFVVLLTHVEEDQD 504 Query: 344 ----VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQA 398 ++IC AL+Q PFDL +G + SIG A+ EH S E L AD MY A Sbjct: 505 AVLVAEKICKALSQ----PFDL-DGRSLLIGSSIGVALYPEHGSDELTLSRSADAAMYLA 559 Query: 399 K 399 K Sbjct: 560 K 560 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 3/160 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATG 302 QL + A +DPLT L NRA FR + M ++ K+ L F+D D FKY+ND+ GH G Sbjct: 833 QLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKG 892 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D +LI++A R+ RLGGDEF ++L ++ ++V +I A+ + F L Sbjct: 893 DDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQ 952 Query: 363 NGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 GH+ + SIG AM + E L + AD MY+AK + Sbjct: 953 -GHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEE 991 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 4/165 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 R QA+ ++L A HDPLTGLANR F + ++ + A+L++D D FK +ND Sbjct: 259 RRQAQ-SKLNYLAYHDPLTGLANRRCFIERLEESLSEGERHGEKLAVLYIDLDQFKQVND 317 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +L+ +A RL+E L RLGGDEF ++ +SE EV+ + + F Sbjct: 318 SLGHGVGDELLVSVAARLSEHVRLIDMLARLGGDEFICLMEAARSEDEVELLAREIIAAF 377 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 PF L + H+ +T S+G ++ S L AD MY+AK Sbjct: 378 EYPFKLGD-HELFLTASVGISLCPSDGNSVLDLMRNADTAMYRAK 421 >UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RVK9_RHORT Length = 917 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 4/156 (2%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LT L NR + + + R+ A+ +LD D+FK INDTWGH+ GD +LI Sbjct: 476 AYHDSLTNLPNRLLLADRMGQALALAVRRQDLLAVCYLDLDSFKPINDTWGHSVGDALLI 535 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E+A+RL + RLGGDEF ++L ++E+EV+++ + P+ + G Q Sbjct: 536 EVARRLQQNARAEDTVARLGGDEFVVLLCGFKAEAEVERVVRRMMDSIATPYSV-GGRQV 594 Query: 368 TMTLSIGYAMTIEHA--SAEKLQELADHNMYQAKHQ 401 T+T+S+G A A+ L AD MY+AK Q Sbjct: 595 TLTVSMGITTFPRDAEQEADALIRHADQAMYEAKRQ 630 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 8/168 (4%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDT 296 +A Q+ A HD LTGL NR+ F + + + R S A+L +D + FK +NDT Sbjct: 387 KAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNKFKGVNDT 446 Query: 297 WGHATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 GH GD++L+E+A+RL+ G +R RLGGDEFA++L + +++ EV + + Sbjct: 447 LGHQAGDQLLVEVARRLS--GCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVERIGVG 504 Query: 355 FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 PF L G T SIG + T ++A+A+ L AD MY+AK Q Sbjct: 505 LGKPFVL-CGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYRAKEQ 551 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHA 300 A++ + A +D LTGL NR++F++ ++ + S K A+ LD D+FK INDT GH Sbjct: 340 EARIQQMASYDDLTGLLNRSSFKAKVSEALKASARSKGDFAVHLLDLDHFKVINDTLGHP 399 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GDR+L +A RL G L RLGGDEF +V V S + + + + Q PFD Sbjct: 400 AGDRLLQMVADRLRGIGALSGSVARLGGDEFVIVQQSVTSPAVAEDLARRVLQELERPFD 459 Query: 361 LHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAK 399 + +G T+ SIG A+ HA+ E +L + AD +Y K Sbjct: 460 I-DGTHVTVGASIGIAIAPFHANDEDRLLKCADIALYAIK 498 >UniRef50_A4FEQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FEQ9_SACEN Length = 516 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 16/187 (8%) Query: 224 FNSLLDEMEEWQLRLQAKNAQLLR----TALHDPLTGLANRAAFRSGINTLMNNSDARKT 279 F +L+ + QL +N +LLR ALHDPLTG+ANR F + + +D R+ Sbjct: 320 FVALMGLVISRQLATLLENNRLLRRAEYEALHDPLTGVANRTLFLHWLERSL--ADCRRP 377 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 L F D D+FK +ND +GHA GD VL A+RL G RLGGDEFA+VL++V Sbjct: 378 IVLAFCDLDDFKEVNDNFGHAAGDLVLTSAARRLTRCAGADDLVARLGGDEFAVVLHNVH 437 Query: 340 S--ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH---ASAEKLQELADHN 394 E Q++ AL + P DL NG ++ S+G A + L AD Sbjct: 438 EPLEEAGQRLLRALQE----PHDL-NGRPLVVSASVGMTYLSPDQPVAGTDTLMRWADSA 492 Query: 395 MYQAKHQ 401 MY AK + Sbjct: 493 MYVAKRR 499 >UniRef50_B1ZF36 Diguanylate cyclase n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZF36_METPB Length = 407 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 4/156 (2%) Query: 249 ALHDPLTGLANRAAFRSGIN--TLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 ALH LTGL NR +F + + N D ALL+LD D FK +NDT+GHATGD +L Sbjct: 224 ALHCGLTGLPNRTSFDQALTAASAGRNDDEDHAVALLYLDLDGFKAVNDTYGHATGDTLL 283 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 ++A+RL + RLGGDEFA++L ++ S +++ A+ LP+DL +G Sbjct: 284 QQVARRLRDVVMAADVVARLGGDEFAVLLTGRRAASA-ERVAGAIIAAVGLPYDLGHGTL 342 Query: 367 TTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 ++ +S+G A T +S + L AD +Y AK + Sbjct: 343 ISIGVSVGIAETDACSSDSHALLVRADRALYTAKER 378 >UniRef50_C7RLE3 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLE3_9PROT Length = 649 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 5/174 (2%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGD 288 E+ E RL+ A+L + A HDPLTGLANR+ + ++ +T A+L +D D Sbjct: 463 ELAEANERLRQSEAELRKLAHHDPLTGLANRSLLYDELRRSIARGKRGGETFAVLMIDLD 522 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK +NDT+GHA GDR+L IA RL E + RLGGDEF +V+ V + + I Sbjct: 523 GFKPVNDTYGHAVGDRLLEVIAPRLQECVRVSDVVARLGGDEFVVVVEGVLDQHQALAIG 582 Query: 349 SALTQIFNLPFDLHNG-HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 + + + + P LH G H + S+G A+ + + L + AD MY AK Sbjct: 583 AKIIAVLSQP--LHIGAHDIQVGASVGVALWPQDGDDTQHLLQSADRAMYLAKQ 634 >UniRef50_A0NVC0 Signal transduction protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVC0_9RHOB Length = 601 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 3/180 (1%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFL 285 +LL++ ++ L+A + + AL DPLT +ANR A + +++ D + ALL + Sbjct: 144 TLLEDSQKMASALKAAKIEAEKKALQDPLTEIANRGALHRRLEDVLHLPDRGQMFALLHI 203 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK IND +GH+ GD +L++ A+ + F G RLGGDEFA+ L + + E+ Sbjct: 204 DLDEFKSINDNFGHSAGDMILLQTAEAMTSFCGPNDLPARLGGDEFALFLAEPPDKEELH 263 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAM--TIEHASAEKLQELADHNMYQAKHQRA 403 + L +P +NGH +T SIG + + +A++L +D +Y AK R+ Sbjct: 264 AMALRLLNAIAMPIR-YNGHSCQVTASIGVVLFHPGQVQNADRLIAHSDIALYDAKTTRS 322 >UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U2V9_MARAV Length = 908 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 19/174 (10%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYIND 295 +L+A ++L R A +DPLTGLANR FR +N ++ S + + +AL+FLD D FK IND Sbjct: 464 QLKAAQSELHRLAFYDPLTGLANRQLFRDRLNHVVRRSRRSGEAAALMFLDLDGFKRIND 523 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESE-----VQQIC 348 T GH GD +L ++A+ L G +R + RLGGDEF ++L + S SE + I Sbjct: 524 TLGHDAGDELLRQVAQWLE--GCVREEDSVARLGGDEFVVLLSRI-SGSEAAGKVAENIL 580 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS--AEKLQELADHNMYQAKH 400 L Q L N H+ +T+SIG M I H S A L + AD MY+AK Sbjct: 581 RRLCQRIRL-----NDHEVGVTVSIGITM-IPHDSEDAGALMKYADLAMYRAKE 628 >UniRef50_Q1H3Y8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y8_METFK Length = 614 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 95/180 (52%), Gaps = 22/180 (12%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--------- 280 E+E +L+ K +L ALHD LTGLANR TLMN+S R + Sbjct: 430 EIEAVNTQLRHKERELRYMALHDALTGLANR--------TLMNDSLKRALARAARDKGIV 481 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 A+L +D D FK INDT+GHA GD VL +A RL + + RLGGDEF +VL D+ Sbjct: 482 AVLLIDLDGFKGINDTYGHAAGDLVLQVVAARLRKVTRVSDVTARLGGDEFVVVLEDIHG 541 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAK 399 + +I L + P + G Q ++ SIG A+++E AE L AD MY+AK Sbjct: 542 VDDAVRIAEKLIRELERPVE--GGLQ--ISASIGIALSVEGQLAEDALLRQADKAMYEAK 597 >UniRef50_C1CWU1 Putative c-di-GMP phosphodiesterase A n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWU1_DEIDV Length = 821 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 21/228 (9%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + R LH + LK+ T V+ R +EER+ E+ Sbjct: 329 IERSLH---ADVLKHKTQVLAAQLQLERLEHRAAEERLRNI------------ELAHANE 373 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGDNFKYIND 295 LQ +L A HD LTGL NRAAF + + ++ DA +LF+D D+FK +ND Sbjct: 374 ALQEAQERLAYQAGHDALTGLMNRAAFEATLEAAVLGTQDA---LGVLFIDLDHFKQVND 430 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L+++A+RL + R GGDEF ++L +VQ ++ + + Sbjct: 431 TLGHPVGDALLVQVAQRLLQCVRDHDLVARQGGDEFTVLLRNVQEHEAAERAAQRILEAL 490 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 ++P +L G Q T+T SIG A+ + + LQ+ AD MY AK +R Sbjct: 491 SVPVEL-AGRQLTVTASIGIALFPQDGTDVTTLQKNADLAMYLAKRER 537 >UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWE5_9BACT Length = 1586 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 9/166 (5%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATG 302 QL ALHDPLTGL NR A S ++ + T +A+ LD ++FK +NDT+GH +G Sbjct: 726 QLEYQALHDPLTGLPNRRALESHLSRSLARGQRNGTITAIGLLDLNDFKPVNDTYGHESG 785 Query: 303 DRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQS---ESEVQQICSALTQIFNL 357 D +L + A+R E LR + RLGGDEF +V+ D+ E ++ + + L + + Sbjct: 786 DLLLRDFARRAGEM--LRDNDFLARLGGDEFVIVIEDLDPGRFEEQLAPLLARLHRTVEI 843 Query: 358 PFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQR 402 PF++ G T+ +++G A+ ++ ++L AD MYQAK ++ Sbjct: 844 PFEMGQGKTATVGMTLGLALAPMDSREPDELLRKADAAMYQAKGRK 889 >UniRef50_Q46NC3 PAS:GGDEF n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NC3_RALEJ Length = 671 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%) Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 +++ H FA D + E ++R L +T + D LTGL NR F + + M Sbjct: 466 DKVVGAHVFARDITA-----ERQKMR------SLEQTTMSDYLTGLLNRKGFDRRLESAM 514 Query: 272 NNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 S+ K ALL +D DNFK +NDT+GH GD++L +A RL G R+GGDE Sbjct: 515 VQSEEGSKIMALLLVDIDNFKLVNDTYGHPVGDKLLNVVATRLKSCAGETCAVARVGGDE 574 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM--TIEHASAEKLQ 388 FA++L DV + V ++ A+ F L NG+Q + S+G A+ ++ + +L Sbjct: 575 FAVILEDVLTSDAVLRVARAILSATCETFIL-NGYQIACSTSVGAALKNPCDNNTRNELL 633 Query: 389 ELADHNMYQAKHQRAEKLV 407 AD +Y AKH + + Sbjct: 634 LKADTALYSAKHSGKARFI 652 >UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=2 Tax=Idiomarina RepID=Q5QZ80_IDILO Length = 866 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 104/204 (50%), Gaps = 20/204 (9%) Query: 207 RRVSEE--RIAEF--HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 +R +EE R+ +F + A L+ E+E R + + L A HD LTGL NR Sbjct: 398 KRSAEEIQRVNQFLEKKVAERTEELVSEIE----RRKKTESSLFHAAHHDNLTGLPNRIL 453 Query: 263 FRSGINTLMNNSDARKTS------ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF 316 F N + + A K A+LF+D D FK INDT GH+ GD L+E++KR+ + Sbjct: 454 F----NERLQQAVAHKRRHPEHHFAVLFVDLDRFKNINDTLGHSAGDEFLLEVSKRIGDC 509 Query: 317 GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA 376 RLGGDEF ++L + S + + + + Q + PF L NG + SIG A Sbjct: 510 VRDNDMVARLGGDEFVILLDTITSIDDAKDVAKRMIQQMSEPFHL-NGQEHYSGASIGIA 568 Query: 377 MTIEHA-SAEKLQELADHNMYQAK 399 +E SAE+L AD MYQAK Sbjct: 569 ECLEETDSAERLLRDADAAMYQAK 592 >UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=A8H0J8_SHEPA Length = 839 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 1/141 (0%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHAT 301 A+L + A HDPLT L NR A +G+ + + T L+++D D FK IN+++GH Sbjct: 404 AELAKVAFHDPLTKLPNRMALNTGLEQELKQASHSNTRLGLVYIDVDLFKQINESYGHPV 463 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL+E+++R ++ G A RLG DEFA++L ++ S + Q + L ++F+ PF L Sbjct: 464 GDEVLLEVSRRFSQSLGDLVTAARLGSDEFALLLPNIDSNDALLQQINNLRKVFDQPFIL 523 Query: 362 HNGHQTTMTLSIGYAMTIEHA 382 Q +T S+G A+ + A Sbjct: 524 GEHGQARLTSSMGVAIYPDDA 544 >UniRef50_UPI0001AEC71A response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC71A Length = 701 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 3/153 (1%) Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEI 309 HD LTGL NR + + K S ALL +D DNFKY+ND+ GH GD ++ I Sbjct: 275 HDQLTGLPNRVLLHDRVVQAITRCFTSKQSIALLLIDIDNFKYLNDSLGHQVGDYIIASI 334 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 AKRLA+ G R+GGDEFA +L ++ S I A Q P D+ +G + Sbjct: 335 AKRLAKVVGESATLARVGGDEFACLLTEIGSGYSADSIAMACLQAGREPIDI-DGKAHQL 393 Query: 370 TLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 +LSIG ++ + A +AE++ AD MY++K + Sbjct: 394 SLSIGISLYPQDAVNAEEMMRHADSAMYRSKSK 426 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 7/157 (4%) Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRV 305 R A HD LTGL NRA F+ +N +N++ + A++FLD D FK++NDT GH GD + Sbjct: 277 RQAYHDTLTGLPNRALFKDRLNVALNHAKRNQQQLAIMFLDLDRFKWVNDTLGHFYGDEL 336 Query: 306 LIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 L +A+RL+ G LR + R+GGDEF ++L+D+Q + + + + PF L + Sbjct: 337 LKHVAQRLS--GCLRAQDTLARMGGDEFTLLLHDLQQPEDASLVAAKIVDELKRPF-LLD 393 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + ++ SIG A+ +H + E L + AD MY K Sbjct: 394 EREIFISSSIGIALYPDHGDTIETLIKSADIAMYHVK 430 >UniRef50_B5HDY0 Integral membrane phosphodiesterase n=15 Tax=Streptomyces RepID=B5HDY0_STRPR Length = 1010 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 98/189 (51%), Gaps = 14/189 (7%) Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDA 276 H+ L FNS D E ++RLQA QL A HDPLT L NRA F + L Sbjct: 522 HQGGLIFNSR-DVTE--RVRLQA---QLQHNAEHDPLTDLPNRALFTERVRGALTGRRAG 575 Query: 277 RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 + +A+LF+D D FK +ND GH GD +LI+ A+RLA+ A RLGGDEFA ++ Sbjct: 576 DEGTAVLFIDLDGFKGVNDRLGHQAGDELLIQAARRLADSVRAGDTAARLGGDEFAALIV 635 Query: 337 DVQS------ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQEL 390 S ES+V +I L + + P+ + +G + + SIG A S L Sbjct: 636 GDGSGDRSARESQVLEIADRLRLMLSQPYRI-DGGEVRVAASIGVAFAEPAMSPTDLMRN 694 Query: 391 ADHNMYQAK 399 AD MY+AK Sbjct: 695 ADLAMYRAK 703 >UniRef50_UPI0001C32105 diguanylate cyclase/phosphodiesterase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32105 Length = 636 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 11/190 (5%) Query: 215 AEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS 274 A R AL L + E R++A+ +++ LHD LTGL NR F + + + Sbjct: 155 AALERLALQVTRHLQRVAE---RIRARE-RIVHQTLHDALTGLPNRVLFEDRLELALVRA 210 Query: 275 DARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEF 331 R T A+ FLD D FK +NDT GH GD +L E+A RL G +R R GGDEF Sbjct: 211 RRRGTICAVFFLDVDRFKIVNDTLGHRAGDALLREVAARL--RGAIRASDTVARFGGDEF 268 Query: 332 AMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQEL 390 A+V + E + +I S L ++P +L G + S+G A+ T A+AE L Sbjct: 269 AVVCDGLADERDALRIASTLHAALSVPCEL-EGESHVLGASVGIALATGREATAEALLRD 327 Query: 391 ADHNMYQAKH 400 AD MY+AK Sbjct: 328 ADAAMYRAKE 337 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 20/232 (8%) Query: 174 AITLTRHLHNGLVEALKNITDVVHDVR---SNRNFSRRVSEERIAEFHRFALDFNSLLDE 230 AI LT L + +V ++ V+ D S + S V + EF + +N ++D Sbjct: 287 AICLTSILISVIVRSITKPLQVLVDASVKVSEGDLSGHVIIKSQDEFQKLGDAYNHMIDS 346 Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDN 289 + ++ A +DPLT L NR F + + + + ++ +++F+D DN Sbjct: 347 LSKF--------------AFYDPLTNLPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDN 392 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH+ GD +L ++A++L G RLGGDEF ++L + ++++ S Sbjct: 393 FKQVNDTLGHSAGDELLQKVAEQLQSSIGSEGVVARLGGDEFVILLEHRADHAYLEKMLS 452 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAKH 400 +L F PF +H G T + +S+G A I+ + E+L + AD MY+AK Sbjct: 453 SLRDSFVQPFTIH-GQITFVQMSLGIASYPIDGVTQEELLKHADIAMYKAKE 503 >UniRef50_Q0F0W1 Two-component response regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W1_9PROT Length = 479 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 5/165 (3%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTW 297 +A +L+ A D LTGLANRA F ++ TL + +K A+++LD D FK +ND Sbjct: 302 KAYEERLMMMAHFDALTGLANRALFHDRLSQTLAYSKRHQKQFAVMYLDLDGFKAVNDHL 361 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L++ A RL R+GGDEFA++L DV + V+ + L + + Sbjct: 362 GHQAGDNLLVQTAHRLRANVREVDTVARMGGDEFAIILDDVHTRDTVELVAWKLIEAISA 421 Query: 358 PF-DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 P+ D+ GHQ TM S+G A+ E + S + L AD+ MY+AKH Sbjct: 422 PYEDVGAGHQVTM--SMGIAIYPEDSTSCDLLITAADNAMYRAKH 464 >UniRef50_C0GT21 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT21_9DELT Length = 456 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 12/176 (6%) Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFK 291 Q R+Q + + A+HD LTGL NR + + M + A++T ALLFLD D FK Sbjct: 277 QRRMQERIEHM---AMHDGLTGLPNRNLLQDRME--MAIAAAKRTGNRVALLFLDLDGFK 331 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 IND +GH+TGD VL +++RL E R GGDEF ++L D + +Q+ + Sbjct: 332 AINDNYGHSTGDEVLTLVSRRLKELVRASDTVARFGGDEFVILLTDTGKLEDAKQVARKV 391 Query: 352 TQIFNLPFDLHNG-HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + P+ L +G HQ + +S+G ++ + A SAE L LAD MY+ K +K Sbjct: 392 AWQLSRPYILPSGEHQ--LGVSMGISLYPDDAESAEDLMRLADKAMYRVKKSSGDK 445 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 10/174 (5%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGD 288 E++E++ R+Q R A DPLT L NRA I + ++ AR + L+ LD D Sbjct: 372 EVDEYRRRIQ-------RLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLLDLD 424 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK +NDT GH+ GDR+L E A+RL RLGGDEF+++L V+ +++ I Sbjct: 425 RFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRAIA 484 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQ 401 + + F F + G + +++SIG + +E A++L + AD MY AK Q Sbjct: 485 GRILEAFGEAF-IIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQ 537 >UniRef50_Q7MJY0 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MJY0_VIBVY Length = 440 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 19/278 (6%) Query: 145 LTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRN 204 L R +++ I S L LL S + + + G + H +R Sbjct: 150 LEKRLGQLTNVIVKSGISLVCFTLLVSVVTFLILKRFKKGCSVLQSGFNQLSHGDLESRI 209 Query: 205 FSRRVSEERIAEFHRFALDFNSLL------DEMEEWQLR----LQAKNAQLLRTALHDPL 254 S+ + EE + RF SL +++E LR L+A+ QL+ + DPL Sbjct: 210 SSKGIDEEFVVVADRFNSMKTSLRQITVTREQLELEVLRQTAELRAQKEQLVYLSERDPL 269 Query: 255 TGLANRAAFRSGIN--TLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 TGL NR AF + + + N K ALLF+D + FK +NDT+GH GD +L +A+R Sbjct: 270 TGLKNRRAFMTALEDAAIKANRSGLKM-ALLFIDLNKFKEVNDTYGHDAGDEILCRVAER 328 Query: 313 LAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMT 370 + + RH RLGGDEF + L ++S V + + P H GH +T Sbjct: 329 MVD--CFRHSDILGRLGGDEFVVCLDLLKSYDGVISKAEQFAEQMSAPILFH-GHHLQVT 385 Query: 371 LSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKLV 407 SIG + + +S+ +L +LAD +MYQAK+ + +V Sbjct: 386 PSIGISCYPDQSSSILELVKLADEDMYQAKNANGDFVV 423 >UniRef50_A6T0I9 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0I9_JANMA Length = 641 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 6/167 (3%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAF-RSGINTLMNNSDARKTSALLFLDGDNFKYIND 295 +L+ + + L A HD LTG+ NR F L +RK + FLD D FK IND Sbjct: 198 QLEQEKGRALLQASHDYLTGIPNRMLFYELAAAELARARRSRKLYGMFFLDLDKFKLIND 257 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQ 353 T GHA GD +L +A+RL E LR RLGGDEF M++ ++ SE+++ ++ + L + Sbjct: 258 TLGHAVGDLLLQGVARRLRE--SLREYDLLARLGGDEFVMLISEMTSENDIAKVAAKLVE 315 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + PF +GH ++ SIG A+ + E L AD MY AK Sbjct: 316 VVREPFPDLDGHDIEISPSIGIALYPRDGQNVETLLTHADAAMYHAK 362 >UniRef50_A0K1H4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrobacter sp. FB24 RepID=A0K1H4_ARTS2 Length = 732 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 16/238 (6%) Query: 168 LLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSL 227 ++A G + R + L+ + ++ V +++ N++ R+ R E A FN + Sbjct: 215 VVAVGATVYFRRRMVKDLMRPVGSLHQGVRKLQAG-NYNHRIEVFRRDELGELAEAFNGM 273 Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFL 285 + + + L A HDPLTGLANRAA + R+ LLF+ Sbjct: 274 -------AAAVHSSHETLTHRATHDPLTGLANRAALMERLTASFGAGSTRRNRNEGLLFI 326 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESE 343 D D+FK +ND+ GH GD +LI++A RL G +R RLGGDEFA+V+ D + S Sbjct: 327 DIDDFKEVNDSLGHERGDALLIQLAARLK--GCVRSDDVVARLGGDEFAIVVMDDDAGSV 384 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKH 400 I + + PF + + + T+T S+G A E A +L AD MY AKH Sbjct: 385 TAWIADRIHRALRAPFFVGD-DRLTVTASMGAAQRRPETTDAAELLRQADFAMYLAKH 441 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 17/201 (8%) Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRL---------QAKNAQLLRTALHDPLTGLANRAAF 263 R E H +L DEM + Q + + A++ A DPLTGL NRA Sbjct: 928 RKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQM 987 Query: 264 RSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 ++ LM +++ ALLF+D D FK INDT GH GD+VL E+A RL E G ++ Sbjct: 988 HEALDRLMAKEESQL--ALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLV 1045 Query: 324 YRLGGDEFAMVLYDV-QSESEVQQICSALTQIFN---LPFDLHNGHQTTMTLSIGYAMTI 379 R+GGDEF +++ + ++E +Q I +I + PF + + Q ++ S+G A+ Sbjct: 1046 SRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIED-RQLYLSASVGIALYP 1104 Query: 380 EHA-SAEKLQELADHNMYQAK 399 E+A S L AD MY AK Sbjct: 1105 ENALSGTDLLRNADTAMYHAK 1125 >UniRef50_B8HN37 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HN37_CYAP4 Length = 426 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 4/164 (2%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWG 298 + QLLR A HD LT L NRA F + + R A+L +D D F+ +N+ WG Sbjct: 254 REDQLLRDAFHDGLTSLPNRALFLDRLGQALKIYRQRGVGLFAVLLVDLDGFRQLNEQWG 313 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 +GDRVL+E+ +RL++ RLGGDEF ++L +V+S +E + L LP Sbjct: 314 QVSGDRVLVEVGQRLSQCLRSGDTVARLGGDEFGVILQNVRSLAEAELCARRLLTQSALP 373 Query: 359 FDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 F L N Q +T SIG M + AE+L + + QAK Q Sbjct: 374 FTLEN-SQVQLTTSIGIVMGQRSYKRAEELLQDVELGAEQAKQQ 416 >UniRef50_Q1NE60 Sensory box/GGDEF family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NE60_9SPHN Length = 761 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 92/172 (53%), Gaps = 13/172 (7%) Query: 232 EEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFK 291 +E +LRLQ R A+ DPLTGLANRA F + + +S R A+L LD D FK Sbjct: 319 KETELRLQ-------RLAMSDPLTGLANRAHFVAAVTQATASSGDRGLVAILLLDLDEFK 371 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICS 349 INDT GH GD +L +A+RL G LR R+GGDEFA++L + +Q I Sbjct: 372 RINDTAGHDAGDALLQTVAERLR--GALRPGDLIARMGGDEFAVLLTRLPDAEALQPILM 429 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKH 400 +T + PF H G SIG A+ +H + + L + AD +Y AK+ Sbjct: 430 RITDQLHAPFS-HAGRPLECRASIGVALYPDHGADDVALFKHADIALYHAKN 480 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 ++ K QL HD LTGL NR ++ +++++ T A+LFLD DNFK IND+ Sbjct: 514 MKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDS 573 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GHA GD +L +A+RL R GGDEF +V+ DV E EV + L ++F Sbjct: 574 FGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFE 633 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 PF + G + +T SIG + + L + AD MYQ+K + Sbjct: 634 EPFVI-KGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAK 678 >UniRef50_C6B0E8 Diguanylate cyclase/phosphodiesterase n=9 Tax=Rhizobium RepID=C6B0E8_RHILS Length = 653 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 3/178 (1%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLD 286 L +E+++ Q + N R ALHD LTGLANR +F + + D+ L LD Sbjct: 200 LTEELKQKQAEAEELNLVNSRNALHDQLTGLANRRSFFLSLEKRLQK-DSSTPPVLGILD 258 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK +ND +GHA GD VL E A+R G RLGGDEF ++ + + + Sbjct: 259 LDGFKPVNDVFGHAAGDLVLKETARRFVALVGEEGIVSRLGGDEFGIIFPSLMTRQAIAD 318 Query: 347 ICSALTQIFNLPFDLHNGHQTTM-TLSIGYAMTIEHASAEKLQELADHNMYQAKHQRA 403 + AL PF++ +G + I Y I +AE L E AD +YQ K +R+ Sbjct: 319 LGQALCAAVRDPFEIPDGSVRVFGSCGIVYP-DIGTYTAEDLYEKADFALYQVKSKRS 375 >UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9K4_9GAMM Length = 938 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 91/170 (53%), Gaps = 9/170 (5%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS------ALLFLDGDNF 290 R QA+N L A +D LT L NR F+ ++ ++ RK + ALLFLD D F Sbjct: 484 RKQAENT-LQHLADYDSLTDLPNRRFFKEQVDHIIEIDKQRKPTEPINKFALLFLDLDYF 542 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K+IND+ GH+ GD+VL IA RL E RLGGDEF +VL D+ SE V+Q C Sbjct: 543 KFINDSLGHSAGDKVLKIIASRLLEHKDKNTIISRLGGDEFVIVLQDIASEKAVKQFCFE 602 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAK 399 L Q P ++ G +T SIG + + + L + AD +Y+AK Sbjct: 603 LMQNIEKPMNIL-GRSLIVTPSIGATLYPKDGNRTNILLKNADAALYRAK 651 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 4/158 (2%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 A HD LTGL NR A+ I +++N + + AL+F+D DNFK IND+ GH GD +L + Sbjct: 247 ANHDSLTGLPNRHAYIDKITSMVNKN--KNNFALIFMDLDNFKTINDSLGHTLGDMLLQK 304 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +AKRL R GGDEF + +VQSE +++ + ++ PF L N ++ Sbjct: 305 VAKRLKNEIKEYDMLSRFGGDEFVFLFSNVQSELTIEKTMIKIHEVLKKPFIL-NTYEVY 363 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 T SIG A+ + A AE L AD MY AK K Sbjct: 364 TTASIGIAIYPDDAQDAELLLRNADVAMYDAKQSGRSK 401 >UniRef50_Q97LD1 Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain (EAL) n=1 Tax=Clostridium acetobutylicum RepID=Q97LD1_CLOAB Length = 772 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 7/209 (3%) Query: 195 VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE-MEEWQLRLQAKNAQLLRTALHDP 253 V +++ SN + ++ E + + + D N +L+E ++E L KN +L + HDP Sbjct: 296 VAYEILSNY-VQKAINNETLLTYEK---DINLILEEKIKERTKELLLKNQELEYISNHDP 351 Query: 254 LTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 +T + NR + ++N +L++D D FK INDT+GH GD VLIEI+ RL Sbjct: 352 ITNVYNRRYLNKRLQCIINEKKLDNQVTILYIDVDGFKTINDTYGHDIGDYVLIEISDRL 411 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 + + RLGGDEF +++ S+ E++ IC L + + +T+SI Sbjct: 412 KKTVKENNILARLGGDEFVIIIEGKLSKEEIKNICEKLINSCKETI-YSDNYLFNVTISI 470 Query: 374 GYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 G AM A S + + AD MY AK + Sbjct: 471 GVAMFPHDAISRNVIMKNADIAMYDAKSK 499 >UniRef50_A9BT74 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID=A9BT74_DELAS Length = 612 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 80/159 (50%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 A+HD LTGLANR A ++ + + + A+ F+D D FK +NDT GH GD VL Sbjct: 450 AMHDVLTGLANRRALQARLQRALAQASGPGQLAVCFMDLDGFKQVNDTEGHDAGDEVLRI 509 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 IA+RL RLGGDEF ++L ++ S + QI P LH+G Sbjct: 510 IARRLTTQARETDCVARLGGDEFVLLLDELASADDALQIMQRCLASIRQPIRLHSGATVQ 569 Query: 369 MTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 + S+G A+ A +L + AD MY AK ++V Sbjct: 570 VGASMGIALNASREDATQLLQRADEAMYAAKRAGKGRIV 608 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 83/157 (52%), Gaps = 2/157 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 +L A HD LTGL NRA F + L A+LFLD D FK++ND+ GH G Sbjct: 1352 KLAYQAFHDALTGLPNRALFMDRLKGALARAKRYNSCCAVLFLDLDRFKHVNDSLGHQYG 1411 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D++LIE+ RL R GGDEF ++L + +Q+ + + PF L Sbjct: 1412 DQLLIEVGNRLLSVVRSADTVARRGGDEFTILLEPICELEYAKQVAERVIKELEKPF-LI 1470 Query: 363 NGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 NG + ++ SIG A++ E++ AE+L AD MY AK Sbjct: 1471 NGQELYISTSIGIALSNEYSDAEELIHNADVAMYWAK 1507 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 10/229 (4%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFAL-----DFNSLLDEMEEW 234 H HN ++E L+ + + F + SE+ E H D + + + Sbjct: 366 HFHN-VIEPLRTAISEGKEFKRECLFLKPNSEQTWVELHARPQISTNGDITGFIATILDS 424 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYIN 294 R +A++ +L A HDPLTGLANRA F+ + ++ + + ALL LD D FK +N Sbjct: 425 TFRHEAED-KLRELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGSLALLCLDLDGFKNVN 483 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH +GD +LIE+AKRL + R+GGDEF ++L ++ ++ + Sbjct: 484 DTLGHDSGDELLIEVAKRLTKCVREEDTVARVGGDEFMILLEGLKDAQIAAEVSEKILNS 543 Query: 355 FNLPFDLHNGHQTTMTLSIG--YAMTIEHASAEKLQELADHNMYQAKHQ 401 P + N + ++ SIG +A + ++ L + AD +Y+AKH+ Sbjct: 544 LEPPCSI-NRQEVFISTSIGITFATKGDKNDSKSLMKQADMALYRAKHE 591 >UniRef50_A5W576 Diguanylate cyclase with PAS/PAC sensor n=4 Tax=Pseudomonas RepID=A5W576_PSEP1 Length = 287 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 94/185 (50%), Gaps = 15/185 (8%) Query: 232 EEWQLRL--------QAKNAQLLR-TALHDPLTGLANRAAFRSGINTLMNNSDARKTS-- 280 EE Q R+ Q K LR A HDPLT LANRA F ++T + + AR+ + Sbjct: 102 EEAQARIGVARDVTAQRKAEDELRFLAHHDPLTRLANRAMFNERLDTAL--AAARRYNRR 159 Query: 281 -ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 ALLFLD ++FK IND GH+ GDRVL +A+RL G R+GGDEF ++L D Sbjct: 160 LALLFLDINDFKQINDNHGHSVGDRVLCTLARRLESCVGAAGTVARMGGDEFTVLLPDCP 219 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQA 398 S + + + P D + SIG A E + A+ L AD +MY+ Sbjct: 220 SPEAIATHVQYILAVMAEPLDAEFAGIDAPSCSIGVARFPEDGNDADMLLRHADGHMYRI 279 Query: 399 KHQRA 403 K QRA Sbjct: 280 KRQRA 284 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 92/167 (55%), Gaps = 7/167 (4%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 +++ +QL R A +DPLTGL NRA + ++ + TS A+LFLD D FK +ND Sbjct: 370 QIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVND 429 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKA--YRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 + GH GDR+L IA+RL G LR + R GGDEFA+VL DV V ++ L Sbjct: 430 SLGHPAGDRLLQIIAERLC--GALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIA 487 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 P DL +GH ++ SIG A+ A L + AD MY++K Sbjct: 488 EIARPLDL-DGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSK 533 >UniRef50_B5GVH8 Phosphodiesterase n=5 Tax=Streptomyces RepID=B5GVH8_STRCL Length = 779 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 3/155 (1%) Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIE 308 L DPLTGL NR + +++ T SAL+ +D D F+ +NDT GH GDR+L++ Sbjct: 319 LRDPLTGLPNRQWLLERTWAALEEAESNGTRSALVLIDLDRFRSVNDTLGHLAGDRLLLQ 378 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 IA RL +A RLGGDEFA++L S + Q++ L + P DL +G Sbjct: 379 IAHRLRHALPRGAEAARLGGDEFAVLLPAADSITSAQRVARQLAGELSSPLDL-DGLTLV 437 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 + S G A+ EHA AE L AD MYQAK R Sbjct: 438 LEASAGVAVFPEHALDAEGLLRRADVAMYQAKRDR 472 >UniRef50_A8L7Z7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Frankia RepID=A8L7Z7_FRASN Length = 706 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 90/174 (51%), Gaps = 8/174 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTW 297 +Q QL A HDPLTGLANRA F + + + +R AL++ D D+FK +NDT Sbjct: 272 VQTSRRQLHHQAFHDPLTGLANRALFDDRLRHALASCSSRPC-ALVYCDLDDFKRVNDTL 330 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 GHA GD +L A RL G+R RLGGDEFA++L D + E + IC L + Sbjct: 331 GHAVGDALLRITAARLRN--GVRSGDTVARLGGDEFAILLEDRHNGPEPEAICRRLAAMI 388 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA--SAEKLQELADHNMYQAKHQRAEKLV 407 P L G + SIG + ++ +A+ L AD MY AK Q LV Sbjct: 389 RAPA-LLAGRSYPVGASIGLVVANANSAPTADALLRDADIAMYAAKRQGKGGLV 441 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 22/185 (11%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 L+ + +L A +DPLT L NR +F +N ++ KT +ALLF+D D+FK IND+ Sbjct: 108 LKRQEDRLRYLAYYDPLTSLPNRRSFNEQLNRILKRCRRHKTNAALLFIDLDHFKRINDS 167 Query: 297 WGHATGDRVLIEIAKRLA----EFGGLRH---------------KAYRLGGDEFAMVLYD 337 GH GDR+L+EIAKRL E + + + RLGGDEF +VL D Sbjct: 168 IGHGRGDRLLVEIAKRLTVELREDDAINYYSDNSAEDDSNNSNTEIARLGGDEFTVVLSD 227 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMY 396 + + +V+++ + + P L + H +T S+G A+ + + L AD MY Sbjct: 228 IPNAGQVERVAQRILAALSEPIALQS-HNPVVTPSVGIALFPQDGEDPDTLVRNADTAMY 286 Query: 397 QAKHQ 401 AK Q Sbjct: 287 AAKAQ 291 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 91/167 (54%), Gaps = 12/167 (7%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD--ARKTSALLFLDGDNFKYINDTWGH 299 A+++ A D LTGLANR F + D A A L LD D FK +NDT GH Sbjct: 516 EARIITMARKDALTGLANRMVFGERLEEAAARLDEGAGAGFATLCLDLDRFKEVNDTLGH 575 Query: 300 ATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQ---- 353 GD +L +A+RL G LR RLGGDEFA+V VQ+ + ++ SAL + Sbjct: 576 PIGDGLLRSVAERLQ--GCLRDTDLVARLGGDEFAIVQAGVQAGTHARRDASALAKRLIA 633 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 F PF L +GH T+ LSIG ++ EH S EKL + AD +Y+AK Sbjct: 634 AFQQPF-LLDGHTVTVGLSIGISLAPEHGTSPEKLLKSADLALYRAK 679 >UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XC86_NAKMY Length = 1039 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 81/156 (51%), Gaps = 3/156 (1%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGD 303 L+R ALHDPLT LANRA ++ + + ALL LD D FK +ND+ GH GD Sbjct: 598 LIRQALHDPLTDLANRALLGDRLDQAIARQQRQPEPFALLLLDLDGFKLVNDSLGHQAGD 657 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +VLI +A RL RLGGDEFA VL + +S+ I L + P +H Sbjct: 658 QVLITVATRLRTSLWAEDTVARLGGDEFA-VLLERTCDSQALAIAEQLLGVLRRPVQVH- 715 Query: 364 GHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 H T S+G A++ +AE + AD MY AK Sbjct: 716 AHTITPDASVGVALSTGDDTAESMLRNADLAMYAAK 751 >UniRef50_Q8YY40 Two-component response regulator n=3 Tax=Nostocaceae RepID=Q8YY40_ANASP Length = 432 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHA 300 QLLR A +D LT L NR F + + S R A+LFLD D FK IND +GH Sbjct: 258 VQLLRNAFYDGLTTLPNRILFLDRLKQAIERSKRRSDYRFAVLFLDLDGFKGINDRFGHG 317 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD L+ IA RL R GGDEFA++L D++ ++ + + LP + Sbjct: 318 IGDDFLVAIAHRLESCVRSGDTVGRFGGDEFAVLLEDIRDVNDAINVAKRIQDTLGLPMN 377 Query: 361 LHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQ 401 L NGHQ T SIG + + E L AD M++AK Q Sbjct: 378 L-NGHQIFTTASIGITLNAGSYDEPENLLRDADQAMFRAKQQ 418 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 12/195 (6%) Query: 218 HRFALDFNSLLDEMEEWQLRLQA---------KNAQLLRTALHDPLTGLANRAAFRSGIN 268 R ++ L E+ + LR+ A A++L A HD LTGL NR FR Sbjct: 527 ERIPIEVRGRLMEVGDENLRVSAVRDMRKQKEDEARILHLAQHDMLTGLPNRTYFRERFQ 586 Query: 269 -TLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRL 326 + N + A +T SA++ LD D FK IND +GH GD+++ +A+RL RL Sbjct: 587 QAIENQACAEETISAVMVLDLDRFKDINDLYGHPVGDKLIQTVARRLNACVTHHDTVARL 646 Query: 327 GGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AE 385 GGDEFA++ ++++ +EV + + + ++ + P + N + SIG A+ EH + + Sbjct: 647 GGDEFAIIQVNLKTTAEVGLLTNKIIEVLSKPIHVGNNITIRTSASIGIALIPEHGTDPD 706 Query: 386 KLQELADHNMYQAKH 400 +L AD +Y+AK Sbjct: 707 ELMSKADIALYEAKE 721 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 4/172 (2%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDN 289 +E+ LR +A++ QL R A HDPLTGL NRA F + M R+ A++++D D Sbjct: 407 VEDITLRKKAED-QLKRQAFHDPLTGLPNRALFLDHLRMAMERGRRRRHLFAVIYMDLDR 465 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK IND+ GH TGD +L +A+ L + G R GGDEFA+++ ++ + + I Sbjct: 466 FKVINDSLGHETGDELLRSVARVLEKCGRSVDTIARFGGDEFAILIEEISASRDAIAIAR 525 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKH 400 + PF + NG++ + S+G + + + E L AD MY+AK Sbjct: 526 RILDGVRQPFTI-NGNEVFTSASLGIVLKTDGYDRPEALLRDADTAMYRAKE 576 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 7/169 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYIN 294 L K + + A +DPLT LANR +F ++ + + ++ S ALLF+D DNFK IN Sbjct: 359 LAKKQETIQKLAFYDPLTKLANRVSFLQTLDEFI--ALGKRESFPFALLFIDLDNFKEIN 416 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH TGD++L KRL A RLGGDEF ++ + S S+ ++ L Sbjct: 417 DTLGHDTGDKLLQAFVKRLKSLLREEDIAARLGGDEFVVLAPGISSPSKALELACRLQNA 476 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 F P + + T+ +SIG A+ + A +A +L + AD MY+AK ++ Sbjct: 477 FQQPL-MVDDRPITVQMSIGIALFPQDAKNANELLKAADIAMYKAKEKK 524 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 29/234 (12%) Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 +V LK + V ++ N + ++ E + L F + +E+ ++R++ Sbjct: 322 MVRPLKQLMGAVREI-GRGNLAPTIALSTSDELGKLGLSFQEMAGNLEKSRVRVE----- 375 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYINDTWGHATG 302 R A HD LTGL NR + +++ + ++R+ A+LFLD DNFK +NDT GH G Sbjct: 376 --RLAYHDSLTGLPNRFRAHETLRCMISLAHRESRRM-AVLFLDLDNFKRVNDTLGHQVG 432 Query: 303 DRVLIEIAKRLAEFGGLRHKAY--------------RLGGDEFAMVLYDVQSESEVQQIC 348 D++L+E+A RL LR + RLGGDEF ++L +V S + ++ Sbjct: 433 DQLLMEMAIRLQVV--LRAEDVIHQEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAAKVA 490 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQ 401 S + I LPF N ++ SIG ++ S + L + AD MYQAK Q Sbjct: 491 SRILDIMKLPF-YFNENEIYSGCSIGISLFPSDGSDVDDLIKRADAAMYQAKSQ 543 >UniRef50_A4XPH3 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPH3_PSEMY Length = 601 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Query: 221 ALDFNS--LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR- 277 AL N L + E L L+ N +L AL DPLTGLANR A + + + S R Sbjct: 407 ALQLNEQILAKRVTERTLALELANQRLSELALQDPLTGLANRTALQQHLEQAIARSQRRN 466 Query: 278 KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYD 337 + A++ +D D FK +ND +GH GD+VL E+A+RL + RLGGDEF ++ + Sbjct: 467 ELLAVMLIDLDGFKPVNDQYGHGFGDQVLAEVARRLRHYLRDADLPARLGGDEFVVICEN 526 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQ 397 VQ+ ++ + + + + + P L G + SIG A+ A L AD MY+ Sbjct: 527 VQTAADARDLAKRVLEGLDTPIYLE-GRAVRVGASIGIALYHGEDDATALIRRADAAMYR 585 Query: 398 AK 399 AK Sbjct: 586 AK 587 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 6/186 (3%) Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRT--ALHDPLTGLANRAAFRSGINTLMNNSDARK 278 A D ++ E+ + ++ K + + T ALHDPLTGL NRA I + Sbjct: 743 ARDAELMVPVAEQVAVAIERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRND 802 Query: 279 TS--ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 + A+L LD D FK+IND+ GH TGD +L+E+A+R+ RLGGDEFA++L Sbjct: 803 SYRFAVLMLDLDRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLE 862 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNM 395 DV S + QI L P + + SIG + T + +A+ L AD M Sbjct: 863 DVDSPRRIVQITRRLLAALERPVRM-GAKVVRTSASIGMVLRTQGYDTADALLRDADIAM 921 Query: 396 YQAKHQ 401 YQAK Q Sbjct: 922 YQAKAQ 927 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 88/166 (53%), Gaps = 7/166 (4%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDT 296 R + +LL A HD LTGL NRA F + + A+LF+D D FK IND+ Sbjct: 314 RRKQAEEKLLHEASHDALTGLPNRAFFMERLGEALRRPGDGDRVAVLFIDLDRFKMINDS 373 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 GHA GDR+L+ A+RL G LR + RLGGDEF ++L V SE E + L + Sbjct: 374 LGHAMGDRLLVAAAERLK--GCLRPQDTLARLGGDEFTVLLEGVSSE-EAASVADRLLER 430 Query: 355 FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 PF L +G++ S+G + E A E+L AD MY+AK Sbjct: 431 LREPFRL-DGYELFTAASVGVVLGGRERAGPEELLRDADIAMYRAK 475 >UniRef50_A5N771 Predicted signal transduction protein containing a GGDEF domain n=1 Tax=Clostridium kluyveri DSM 555 RepID=A5N771_CLOK5 Length = 273 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 84/136 (61%), Gaps = 4/136 (2%) Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 +A +D LTGL NR FR+ + T+++N K AL+F+D D+FK +NDT+GH GD +L+ Sbjct: 137 SAYYDSLTGLPNRILFRNDLKTILDN---YKNGALIFIDIDDFKSVNDTFGHDYGDLLLV 193 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 ++ +A YRLGGDEF +++ + S +E++++C ++ PF++ Q Sbjct: 194 IFSQLIAMCIEPYGTLYRLGGDEFMLLIDKLNSYNELKKLCMEISHYLKNPFEVKE-KQI 252 Query: 368 TMTLSIGYAMTIEHAS 383 +T+SIG A+ E +S Sbjct: 253 YITISIGIALFPEDSS 268 >UniRef50_A5P839 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Erythrobacter RepID=A5P839_9SPHN Length = 738 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 3/156 (1%) Query: 247 RTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRV 305 R A D LTGLANR I+ TL A++ +ALL LD D FK +NDT GHA GD++ Sbjct: 162 RLAKFDSLTGLANRHRMEHRIDSTLQTFRSAKRAAALLMLDLDRFKQVNDTLGHAAGDQL 221 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L ++A+RL + R + RLGGDEF +++ D+ E+ +I + Q+ + P+ + G Sbjct: 222 LQQVAERLNQVISGRGEIGRLGGDEFQILIPDMDDRGELGEIAKKIIQMLSQPYSVEEG- 280 Query: 366 QTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKH 400 + T+ S+G A+ + ++L AD +Y +K+ Sbjct: 281 RCTIGCSVGIAIAPYDGVERDELTRAADLALYASKN 316 >UniRef50_D2UCH8 Hypothetical two-component system sensor protein n=1 Tax=Xanthomonas albilineans RepID=D2UCH8_XANAL Length = 716 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 7/166 (4%) Query: 239 QAKNAQLLR-TALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYIN 294 Q + Q LR A +D LT L NRA + + AR+ + A+LFLD D FK IN Sbjct: 274 QKRAEQELRYLANYDTLTSLPNRALLSERLARAIVR--ARRQAGAVAVLFLDLDRFKDIN 331 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD+VL +A+RL + G +H RL GDEF +V+ D+ S+ E + + + + Sbjct: 332 DSQGHPVGDQVLRAVAERLQQAVGPQHTVARLAGDEFTVVVEDIVSQDEAESVAARVLAA 391 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 F P L + + ++ SIG ++ +HA +L + AD MYQAK Sbjct: 392 FEPPLRLDDRREVAVSTSIGISLFPQHALLPSELLKHADTAMYQAK 437 >UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHT6_THEEB Length = 712 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 4/160 (2%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYINDTWGHA 300 AQLL LHD LTGLANR I + R A+LF+D D FK IND+ GH+ Sbjct: 276 AQLLHDGLHDWLTGLANRTLLFDRIEQAARHGRRRPDYKLAILFIDIDRFKVINDSLGHS 335 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 +GD +LIE+A RL R+GGDEF ++L D+ ++ +C + + PF Sbjct: 336 SGDLILIELANRLTRIVRADDTVARIGGDEFVILLDDISDNNDALAVCDRIHSELDKPF- 394 Query: 361 LHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAK 399 + N + +SIG A+ H AE AD MY+AK Sbjct: 395 VVNDQPIALRVSIGVALRSAHIEKAENYLRNADIAMYRAK 434 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 80/158 (50%), Gaps = 2/158 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 Q+ A HD LTGL NR F + + ++ A+L LD D FK +NDT GH GD Sbjct: 393 QVFHMARHDMLTGLPNRHYFGDCYQEAVASLAPERSVAVLMLDLDGFKTVNDTRGHPVGD 452 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +VL E+A RL RLGGDEFA++ ++SE E + L + PFDL Sbjct: 453 QVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRSEQEACDLARRLIAAISKPFDL-E 511 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 G + S+G A H SAE++ AD +Y AK Sbjct: 512 GAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQ 549 >UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=cellular organisms RepID=A9BVF0_DELAS Length = 573 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 86/173 (49%), Gaps = 10/173 (5%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---------ALLFLDG 287 +L N +L R A DPLTG ANRA F + + +D+ LL++D Sbjct: 112 KLLRANVKLKRIAFRDPLTGTANRALFEYRLGRTIARADSSVEQPGPCGPVRVGLLYIDL 171 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK IND GHA GD +L ++A RL R+GGDEF ++L + S + + Sbjct: 172 DGFKPINDVEGHAAGDALLCQVAVRLGHMTRKSDTLARVGGDEFVLLLGCLASVDDAVAM 231 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKH 400 + + + PFDL G +++ SIG A+ +H EKL AD MY AK Sbjct: 232 AGRVQKALSQPFDL-PGKAVSISSSIGVAIYPDHGKKEKLMAAADAAMYTAKR 283 >UniRef50_B1HXA7 Inner membrane protein n=2 Tax=Bacillaceae RepID=B1HXA7_LYSSC Length = 505 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 5/161 (3%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 ++ + A DPLTG+ NRA + +++L+ + LL +D DNFK +ND +GHA G Sbjct: 327 SKTIHLATFDPLTGVYNRATYIRKMDSLLKKRKLNR-PGLLLIDLDNFKQVNDQFGHAEG 385 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA-LTQIFNLPFDL 361 D++LI AK L + R GGDEFAMVLYD +E +QQ+ A LTQI L + Sbjct: 386 DQILIGTAKILKKVVKKDGFVVRFGGDEFAMVLYDT-TEHHMQQVADAILTQIRTLKLED 444 Query: 362 HNGHQ-TTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKH 400 H + + +++S+G A+ +E L E AD +YQ+K+ Sbjct: 445 HAIQKWSVLSVSMGGAIYHHPEDSEMSLFERADRALYQSKN 485 >UniRef50_C6QMV9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QMV9_9BACI Length = 553 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATG 302 QL A HDPLT L NR F ++ + ++ K+ A+L+LD DNFK +NDT+GH G Sbjct: 386 QLEFLAFHDPLTKLPNRRLFFDIVDKSIIEAERTKSGLAVLYLDMDNFKDVNDTFGHDIG 445 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL- 361 D +L + AKR+ + G + R+GGDEF ++L V+ ++V QI L+ P+ + Sbjct: 446 DELLKQFAKRIKKNVGEHNVVCRIGGDEFLVLLKGVKERTDVHQIAKRLSTNIRKPYRIK 505 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQR 402 H +TT ++ I + I+ +++ L AD +YQAK ++ Sbjct: 506 HLTIRTTASMGIAVS-PIDGTTSKALIHHADQALYQAKMKK 545 >UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cereus group RepID=B7ITK1_BACC2 Length = 914 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 5/172 (2%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDT 296 L+ + ++ A HD +T + NRA F + ++ N+ A ALL+LD D FK INDT Sbjct: 467 LKKQQEEIKYLAFHDTVTKIGNRAFFHKKLKRVIKNAKIAGSEFALLYLDLDRFKAINDT 526 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH++GD +L E+AKR R+GGDEF +++ + E + Q+C+ L + Sbjct: 527 LGHSSGDYILEEVAKRFQSCLPSHTHLSRIGGDEFTIIIENYTDEDYLFQLCNQLFECMK 586 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHN--MYQAKHQRAEKL 406 F +H H+ T++LSIG A+ H+ + L + N MY AK + L Sbjct: 587 KSFIIHE-HKLTLSLSIGIAIY-PHSGIDTATLLKNANVAMYDAKAKELNSL 636 >UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UTZ4_RHOBA Length = 614 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 6/171 (3%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDN 289 E+EE ++ + A+L R ALHD LTGLANR F + + N+++ + A+L +D D Sbjct: 172 ELEEL---VRVRTAELERVALHDGLTGLANRIKFNDRLRDSLANANS-QPPAVLLIDLDQ 227 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK INDT GH GD ++ + +RL+ G RLGGDEFA+VL ++ ++ I Sbjct: 228 FKLINDTLGHPAGDELIRIVGQRLSAVVGAAGLVARLGGDEFAVVLDHNPTQRTIESIAD 287 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAK 399 + P L +G ++T SIG + E+ A++L AD MY+AK Sbjct: 288 GIQSSVAEPV-LLDGVPFSVTASIGICGSPDENCDADELIRNADIAMYRAK 337 >UniRef50_A1SUA4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SUA4_PSYIN Length = 810 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 22/167 (13%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A +D LTGLANR +F ++ +M+ KT AL F+D DNFKY+NDT+GH TGDR+L+ Sbjct: 360 ANNDSLTGLANRGSFNEKLSAIMDARQKNKTYVALFFIDLDNFKYVNDTFGHDTGDRLLV 419 Query: 308 EIAKRLAEF---------GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 ++RL + G + RLGGDEF +++ + S ++ I + +F Sbjct: 420 VFSQRLQQLLRAEDNFISGNMIDSIARLGGDEFVILMNGLPSIETIESIGKRICDLF--- 476 Query: 359 FDLHNG-----HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 HNG Q + SIG A + +H + E L AD MY AK Sbjct: 477 ---HNGFRIGEEQFDVHASIGIAYSNDHQINGEGLLTQADDAMYLAK 520 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGH 299 K L A +DPLT L NR + + ALLF+D D FK +NDT GH Sbjct: 158 KQNHLYHLAHYDPLTSLPNRLLLNDRLKRACLRGQRGGYRIALLFIDLDRFKLVNDTLGH 217 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 A GD++L +A R A RLGGDEF ++L VQ E + + L Q PF Sbjct: 218 AAGDQLLQGVAGRFAACVRKVDTVARLGGDEFTVLLEPVQGPDEALAVAAKLAQSLERPF 277 Query: 360 DLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQ 401 + N H+ T + SIG + EH A+ E L AD MY AK + Sbjct: 278 LIQN-HEITTSASIGVVLFPEHDATVEGLMRKADAAMYCAKRE 319 >UniRef50_C6HUQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUQ3_9BACT Length = 1354 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 5/183 (2%) Query: 224 FNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALL 283 F +L+++ E++ L A+N++L + HDPLTGL NRAA + L+ + + ++ Sbjct: 844 FVGVLNDISEFR-ELLAQNSRLTFSVQHDPLTGLLNRAALEDHLLRLVARKNRQGGGFIV 902 Query: 284 -FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV--QS 340 LD D+FK +NDT+GH+ GD +L E+A+RL++ RLGGDEFA+V+ D+ + Sbjct: 903 GILDLDDFKPVNDTFGHSAGDTLLQELARRLSDTIRSHDFIARLGGDEFALVIEDIVNPT 962 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 E L Q PF++ G T M LS+G A A E L AD + K Sbjct: 963 TPEFHAFLDRLRQTIENPFEILPGRMTHMGLSLGVAFYPSDALDPEMLLREADRALCHIK 1022 Query: 400 HQR 402 ++ Sbjct: 1023 EKK 1025 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 5/165 (3%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 R QA+ + L A HDPLT L NR A + ++TL+ + ALL +D DNFK IND Sbjct: 213 RAQAERLEYL--ARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTIND 270 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GDR+L E+A+RL L + +RLGGDEF +V+ + +E V ++ L Sbjct: 271 SLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVIELVQQLAGGI 330 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 P ++ +GH T SIG ++ E A+ L AD MY AK Sbjct: 331 GDPCNI-DGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAK 374 >UniRef50_B0TPL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=17 Tax=Shewanella RepID=B0TPL9_SHEHH Length = 715 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 4/160 (2%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNN--SDARKTSALLFLDGDNFKYINDTWGHA 300 A+L + A++D LTGL NR ++ +NN AL+FLD + FK +ND++GH+ Sbjct: 271 AKLTQQAMYDKLTGLPNRFHLIQILSKAINNIKRSPEMIGALMFLDLNGFKNVNDSFGHS 330 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 TGD+VL +A RL + RLGGDEF +VL + + E++ + +F PF+ Sbjct: 331 TGDKVLQLVAARLEACCIENAEIARLGGDEFTLVLPECHNRQEIETFSELILSLFEAPFE 390 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + NG + + SIG ++ + + +L +AD MY AK Sbjct: 391 I-NGQKFYLGTSIGISLFPQQSDDPNQLLSMADTAMYSAK 429 >UniRef50_B5GGZ7 Phosphodiesterase n=11 Tax=cellular organisms RepID=B5GGZ7_9ACTO Length = 778 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIE 308 L DPLTGL NR I T ++ ++ + ALL +D D F+ +NDT GH GDR+L++ Sbjct: 333 LRDPLTGLPNRQWLLERIWTALDAAERQGGRIALLLIDLDRFRSVNDTLGHLAGDRLLLQ 392 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A+RL +A RLGGDEFA++L S + Q++ L P DL +G Sbjct: 393 VAERLRVSLPREAEAARLGGDEFAILLPATDSTTAAQRLARRLVGELGSPLDL-DGLTLV 451 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 + S G A+ +HA AE L AD MYQAK R Sbjct: 452 LEASAGVAVFPDHALDAEGLLRRADVAMYQAKRDR 486 >UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73380_SYNY3 Length = 732 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 99/184 (53%), Gaps = 25/184 (13%) Query: 234 WQLRLQ-------AKNAQLLRTALHDPLTGLANRAAFRSGI----NTLMNNSDARKTSAL 282 W RLQ A QL ALHD LTGLANRA + + + NN +R AL Sbjct: 282 WNYRLQKEIKLRKASQNQLSYQALHDTLTGLANRALLLQRLEFAGHQIKNNPKSR--FAL 339 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQS 340 LF+D D+FK IND+WGH+ GD +LI+IA++L LR A RLGGDEF + L +S Sbjct: 340 LFIDLDHFKLINDSWGHSVGDALLIKIAEKLQ--INLRETDLAVRLGGDEFVIFL---ES 394 Query: 341 ESEVQQICSALTQI---FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMY 396 +E++Q +I LP + + + SIG + +I + E+L AD MY Sbjct: 395 ITEIKQAIDVAERILIHLRLPVQIQ-AKELFVKASIGIVIGSIHYYEPERLIRDADIAMY 453 Query: 397 QAKH 400 QAK+ Sbjct: 454 QAKN 457 >UniRef50_C7RJK9 Diguanylate cyclase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJK9_9PROT Length = 392 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 7/161 (4%) Query: 249 ALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 ALHD LT L NR F I TL S + LL +D DNFK IND +GH GDRVL Sbjct: 223 ALHDDLTALGNRRYFEETIARTLSIASRDQGKVGLLAIDLDNFKPINDRYGHTAGDRVLK 282 Query: 308 EIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 +A RL +R + R+GGDEFA+++ V +ES+V + S L PF L + Sbjct: 283 AVAARL--LSSIRAADFCARMGGDEFAIIVASVHAESDVADVASKLRLALAEPFQL-DAI 339 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 ++ S+G+A+ + A L +AD MY+AK R + Sbjct: 340 VVRISASVGFAVYPDDGIGASALWSVADRRMYRAKASRVSE 380 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 91/170 (53%), Gaps = 10/170 (5%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAF----RSGINTLMNNSDARKTSALLFLDGDNFKYI 293 L+ +L +A HD LT L NR+ F + I L S+ A+LFLD D FK I Sbjct: 736 LKKTEEKLRYSASHDALTNLWNRSFFIERLKKSITRLHKQSNY--LFAVLFLDLDGFKII 793 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND GH GD +LIEI+KRL + RLGGDEF ++L ++ +E Q+I S + + Sbjct: 794 NDCLGHGMGDLLLIEISKRLKISLHSGNILCRLGGDEFTILLENISDINEAQEIASRVLK 853 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIE--HASAEKLQELADHNMYQAKHQ 401 I N PF L GHQ + SIG H E L++ AD MY+AK + Sbjct: 854 ILNKPFTL-KGHQVFIGTSIGIVKGTREYHLPPEILRD-ADTAMYRAKKK 901 >UniRef50_Q2RTU2 Guanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTU2_RHORT Length = 433 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 7/161 (4%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHA 300 +L+R A DPLTGL NRA F+ + + + AR+ LLF+D D FK +ND +GH Sbjct: 256 ELVRQATTDPLTGLPNRALFQKLLVSGLER--ARRYDRHLGLLFVDIDGFKQVNDRFGHE 313 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD VL E+A+RL + + RLGGDEF ++L +V++ES+V+ + + + Q+ F Sbjct: 314 GGDEVLREVARRLRRAVRVSDEVARLGGDEFTLLLSEVKAESDVETVAAKVVQVLGEAFS 373 Query: 361 LHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKH 400 + + ++ S+G A++ + AE L AD MY+AK Sbjct: 374 IED-QPLVLSASVGVALSPADGRDAESLLRAADEAMYRAKR 413 >UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 6/155 (3%) Query: 249 ALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A HDPLT L NR S ++ LM + AL+FLD D+FK IND+ GH GD +L Sbjct: 574 AYHDPLTNLPNRRMLLSRLHHALMQTERFYRAMALMFLDLDHFKNINDSLGHDVGDMLLK 633 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E+A RL + R GGDEF +VL ++ + + + + F P L NGH+ Sbjct: 634 EVANRLLKCVRSIDTVSRHGGDEFVIVLSEISHTEDAELVAQKIIASFKEPI-LINGHEI 692 Query: 368 TMTLSIGYAMTIEHASAEKLQEL---ADHNMYQAK 399 M+ SIG A++ +H K EL AD MY+AK Sbjct: 693 MMSTSIGIAVS-KHEKPTKADELMKHADKAMYEAK 726 >UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GAF n=1 Tax=Deinococcus deserti VCD115 RepID=C1D398_DEIDV Length = 960 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 8/163 (4%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATG 302 QL ALHD LTGLANR F + ++ + A+LF+D DNFK +ND+ GH G Sbjct: 536 QLKYQALHDALTGLANRQLFEESLQRALDAAQHVGGELAVLFIDVDNFKSVNDSLGHEAG 595 Query: 303 DRVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 D+VL EIA RL G ++H R+ GDEF ++L SES+ ++ +T++ + P Sbjct: 596 DQVLREIASRLK--GCVQHGDTVARISGDEFTVIL-PFASESDALEVARQITEVLSDPMH 652 Query: 361 LHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 + + Q ++ SIG +T E S E L AD MY AK ++ Sbjct: 653 VVD-RQIKVSASIGITLTPEGGSDPEMLHRTADLAMYHAKSRK 694 >UniRef50_A1W561 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1W561_ACISJ Length = 596 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 7/167 (4%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 L+ A DPLTGL NR + + + ++ A + A+ LD D FK +ND GHA GDR Sbjct: 423 LMSLARTDPLTGLPNRRGLDAALGAALPHAQADRLLAVFMLDLDGFKPVNDQHGHAVGDR 482 Query: 305 VLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 +L+ +A+RL LRH RLGGDEF ++ + S + + AL + F PF + Sbjct: 483 LLVAVAQRLRAH--LRHADLIARLGGDEFVVMAQQLPSVMQAHDLGIALLESFLTPFYV- 539 Query: 363 NGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLVR 408 G + + L+IGYA+ + A L LAD MY K QR + VR Sbjct: 540 QGVEIRVGLTIGYALAPDDACDVGTLIRLADAAMYSGK-QRGKFCVR 585 >UniRef50_B8HRL0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRL0_CYAP4 Length = 905 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 6/157 (3%) Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSD--ARKTSALLFLDGDNFKYINDTWGHATGDR 304 R AL+DPLT LANR+ + M + + A+LFLD D FK++ND+ GH GDR Sbjct: 472 RKALYDPLTHLANRSLLMERLRQAMQIRERYPARLFAVLFLDLDRFKWVNDSLGHWIGDR 531 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +LIEIA RL RLGGDEF ++L ++ + +E + S + F++ G Sbjct: 532 LLIEIAARLKALSRSEDTVARLGGDEFVLLLANLSTPAEAIAVASRIQHTLAQVFEI-EG 590 Query: 365 HQTTMTLSIGYAMTIEH--ASAEKLQELADHNMYQAK 399 H SIG A +H E+L + AD MYQ+K Sbjct: 591 HTIYTGTSIGIAFA-DHLEQKGEELLQYADMAMYQSK 626 >UniRef50_D2M1Z6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1Z6_BACS4 Length = 427 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 86/156 (55%), Gaps = 7/156 (4%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS---ALLFLDGDNFKYINDTWGHATGDRV 305 A HDPLTGL NR F+ + LM+ A+K S A LFLD DNFK +ND GH GD+ Sbjct: 261 AYHDPLTGLPNRGFFKEYM--LMSLERAKKNSESMACLFLDCDNFKQLNDAHGHDAGDKF 318 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L +AKRL R+GGDEF ++L + S+ V + L ++ N P+ L G Sbjct: 319 LQSVAKRLHSELQKDDMIARIGGDEFNILLSQMNSKQHVSDVAQRLLKVINEPWPLSGG- 377 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 + +T SIG A+ E + E L + AD +Y AK+ Sbjct: 378 EWEITASIGIALYPEDGDTMETLLKHADIALYDAKN 413 >UniRef50_Q470T2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=Q470T2_RALEJ Length = 663 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 92/175 (52%), Gaps = 9/175 (5%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGD 288 ++ +W +L QL +L DPLTG+ NRA R+ + ++ R A+ +D D Sbjct: 212 DVTKWAQKLH----QLTEQSLTDPLTGVGNRALIRNRVEAYFTGDASQRGRFAIALMDLD 267 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK IND+ GH GD +L E+++RL R RLGGDEF ++L DV SE + Sbjct: 268 GFKKINDSLGHEIGDILLKELSQRLVATVRSRDTVARLGGDEFVILLDDVSSEEAAVGML 327 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIG--YAMTIEHASAEKLQELADHNMYQAKHQ 401 + ++ PF L G Q +T SIG +A + A+ L+ AD MY+AK Q Sbjct: 328 EQIMRVCRQPFHL-AGCQVRVTTSIGLAFASGVRETDAQLLRR-ADRAMYEAKAQ 380 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 AQ+ A HD +TGL NR F +N L + K A+++LD D FK+INDT GH G Sbjct: 525 AQMEFLAYHDYMTGLPNRRLFDQTLNGLFEGKNPEKF-AIMYLDLDRFKHINDTLGHPIG 583 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D+VL E A R+ A R+GGDEFA++ +V+S + ++ + +T P+++ Sbjct: 584 DQVLKEAADRITASIRKGDFASRMGGDEFAIIARNVESIEDASRLAAKITGTIQKPYEIE 643 Query: 363 NGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKH 400 G++ +T SIG ++ + S E+L AD +Y AK Sbjct: 644 -GYELFITASIGISLYPNNGSTPEELARNADAALYHAKQ 681 >UniRef50_A4XQX9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XQX9_PSEMY Length = 657 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 7/163 (4%) Query: 249 ALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A DPLT L NR AF + L + AL F+D D+FK +ND +GH GD +L Sbjct: 488 AYRDPLTSLGNRKAFHEQLQGDLQQTLNEGSVLALFFIDLDHFKQVNDQYGHDAGDALLC 547 Query: 308 EIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 IA RL GLR K YRLGGDEF +++ +E+ + + L PF++ Sbjct: 548 AIAARLQH--GLRQPGKLYRLGGDEFTLLMPQATAEA-ARALGERLLGSLGAPFEIAGHS 604 Query: 366 QTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKLV 407 +T S+G A+ +HA+A E L + AD MYQAK +R + ++ Sbjct: 605 IDFVTPSVGIALCPQHATASEALIKAADSAMYQAKRKRNQVVI 647 >UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=cellular organisms RepID=A5ETG3_BRASB Length = 671 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 13/190 (6%) Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALL 283 SLL E Q QA + + R A D LT L NR F S + +++ T A+ Sbjct: 209 KSLLAE----QAATQALSDENFRLANLDSLTDLPNRRRFFSELAQAFEDAERDGTRLAVG 264 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAE----FGGLRHKAYRLGGDEFAMVLYDVQ 339 +D D FK +NDT+GH+ GDRVLIE A+R+++ G H A RLGGDEF +++ Sbjct: 265 IIDLDGFKPVNDTYGHSVGDRVLIEAARRISDVCDSVGDNVHLA-RLGGDEFGLIVAGDP 323 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQA 398 + E+ + +T+ LP++L H T ++ S G+A+ A+ A+ L E AD+ +Y A Sbjct: 324 EDDELLALGRQITERIQLPYELDTAH-TGVSCSTGFALYPRSATAADALYECADYALYHA 382 Query: 399 K-HQRAEKLV 407 K H R + ++ Sbjct: 383 KRHARGQTVI 392 >UniRef50_A9L0X2 Diguanylate cyclase with PAS/PAC sensor n=7 Tax=Shewanella RepID=A9L0X2_SHEB9 Length = 664 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 7/165 (4%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTW 297 +A+ L A HD LT L NR F + + +++ + A+LFLD DNFK +ND + Sbjct: 492 KAEEEYLRHIAHHDALTNLPNRVLFHTKLEQAIVHAQRSDDIFAILFLDLDNFKPVNDQF 551 Query: 298 GHATGDRVLIEIAKRLAEFGGLRH--KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 GH GD++L E+AKRL+ G+R RLGGDEF ++L + + + Q+ ++Q Sbjct: 552 GHDVGDKLLQEVAKRLS--SGIRQMDTITRLGGDEFVILLEHLANTHRIGQLIPQISQAI 609 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 P+ + NGHQ + +S+G A+ E+ + A+ L AD MY K Sbjct: 610 CAPYTI-NGHQIHIGVSVGLAIYPENGTDAKSLINHADQAMYSMK 653 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 3/165 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSG-INTLMNNSDARKTSALLFLDGDNFKYINDT 296 L+ A+L A +D LT L NR FR I++L+ + + A+LFLD D FK INDT Sbjct: 516 LKETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDT 575 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L EIA RL + R+ GDEF ++L D+Q ++V I + +F+ Sbjct: 576 LGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFS 635 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKH 400 + N H ++ SIG A++ ++++ A+ L +D MY+AK Sbjct: 636 QTIQI-NSHMLQISASIGVAISPDNSNDADALLSFSDSAMYEAKE 679 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 251 HDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEI 309 HD LT L NR IN +D+ K+ AL+ +D D+FKY+ND+ GH+ GD+V+ ++ Sbjct: 395 HDQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQV 454 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 AKRL R+GGDEF ++L + + S+V I + + + N PF + +G + T+ Sbjct: 455 AKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNTPFRI-DGQEYTL 513 Query: 370 TLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 ++S+G ++ A AE+L D MY+AK Sbjct: 514 SVSVGISIYPSDALRAEELMTHVDAAMYRAK 544 >UniRef50_A3QDF4 Diguanylate cyclase n=1 Tax=Shewanella loihica PV-4 RepID=A3QDF4_SHELP Length = 451 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 4/160 (2%) Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 R ALHD LT L NR + ++ LMN + + LL +D ++FK +ND GH GD +L Sbjct: 292 RAALHDELTHLPNRRFIINELDRLMNKPN-QPPFTLLNIDLNDFKGVNDELGHEAGDELL 350 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ-IFNLPFDLHNGH 365 IA RL G++ R GGDEF ++LY++ E+++I + +TQ I + PF + Sbjct: 351 KYIANRLVTEVGIKGSVARFGGDEFLILLYELTDMQEIEEIMAHITQAIESQPFSWQS-Q 409 Query: 366 QTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAE 404 Q T +LSIGYA+ ++A ++L AD MYQ K E Sbjct: 410 QLTPSLSIGYAIYDGQNADIKELLSDADKRMYQQKRAYRE 449 >UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4ABI7_9GAMM Length = 654 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 101/176 (57%), Gaps = 9/176 (5%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDN 289 +E LR +A++ + R AL D LTGL NR + + + + T +AL+FLD D Sbjct: 201 LEMTYLRSKAEDT-IERQALFDELTGLPNRRLLQDRLGQALARAKRNNTQAALMFLDLDF 259 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE-----V 344 FK +ND+ GH+ GD +L+EI +RL++F A RLGGDEF ++L D++ SE V Sbjct: 260 FKRVNDSLGHSAGDELLVEIGRRLSDFLREADTAARLGGDEFVLLLTDIEGGSEHVVSVV 319 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 ++ L Q P ++ G++ +T+SIG ++ + + + L + AD MY+AK Sbjct: 320 RRRGETLRQAVEAPINI-KGNEVHITVSIGVSLLPDDTNDVDDLLKHADTAMYRAK 374 >UniRef50_B5W389 Diguanylate cyclase with PAS/PAC and Chase2 sensors n=4 Tax=Cyanobacteria RepID=B5W389_SPIMA Length = 729 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 17/180 (9%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 +L+ NA+L + A HDPLTGL NR F + + +D +K L FLD +NFK IND Sbjct: 546 QLEKYNAELQQRADHDPLTGLPNRQLFEERLTQALIWADTNQKFVGLFFLDLNNFKPIND 605 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLR--HKAYRLGGDEFAMVLYDVQSESE----VQQICS 349 +GH GD VL +A+RL G LR RLGGDEF ++L + S ++ ++I Sbjct: 606 QYGHHVGDLVLKLVAERLR--GCLRASDTVSRLGGDEFTIILPGIPSHADAVRVAEKILD 663 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK--HQRAEKL 406 +TQ L + H T+ LSIG ++ ++ E L + AD MY+AK HQ + +L Sbjct: 664 QVTQESEL-----DSHVITIGLSIGISLYPLDSQDYETLVQKADAAMYRAKSRHQNSYEL 718 >UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHG0_THEEB Length = 790 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 4/161 (2%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWGH 299 AQLL A HD LT L NR F + +N++ A A+L LD D FK +ND+ GH Sbjct: 352 EAQLLYQARHDHLTHLPNRWLFEDQVRLSLNHAAAHSDFHYAVLCLDLDRFKTLNDSLGH 411 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 A GD +L AKRL + RLG DEFA++L D+Q + Q I L + N PF Sbjct: 412 AIGDLLLQAFAKRLTRCVSPQDVVARLGSDEFAVLLNDIQGIEQAQAIAQRLRERLNHPF 471 Query: 360 DLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAK 399 ++ + + T+SIG M H S E+L AD MY AK Sbjct: 472 EI-DHYTLYTTVSIGLVMGDAHYKSTEELLRDADMAMYYAK 511 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 8/176 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGI--NTLMNNSDARKTSALLFLDGDNFKYIND 295 L+ K AQ++ A HD LTGL NR R + + L DAR A+L+LD DNFK +ND Sbjct: 285 LKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKGGPDAR--LAVLYLDMDNFKTVND 342 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVL-YDVQSESEVQQICSALTQ- 353 + GHA GD +L +A RL R RLGGDEF ++L + + E+ + SA Q Sbjct: 343 SLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAETESARIQD 402 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 F PF+ + H+ + SIG ++ E L + A+ MY+AK Q + R Sbjct: 403 SFTRPFNAAD-HELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKEQGGARFRR 457 >UniRef50_C5RHS3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Clostridium cellulovorans 743B RepID=C5RHS3_CLOCL Length = 431 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAF-RSGINTLMNNSDARKTSALLFLDGDNFKYIND 295 L+ N ++ A HDPLT + NR F + +T+ +A++ L F+D D FKY+ND Sbjct: 253 ELKKSNEKIEYMAYHDPLTNIGNRNYFLKEFSDTISKAEEAKRMPVLFFIDLDGFKYVND 312 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GH GD+VL+ ++ RL E + +R GGDEF +++Y + ++ + + Sbjct: 313 TYGHFYGDKVLLSVSSRLKEVLKNSGQIFRQGGDEFTILVYHCEERKNIEILVQQILDTI 372 Query: 356 NLPFDLHNGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAKHQRAE 404 +P ++ G ++ SIG + + ++L + D +MY K ++ + Sbjct: 373 RMPSNIF-GDDIKVSASIGIVRYPSDGKNLDELMKKVDTSMYYIKERKKD 421 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 12/170 (7%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTW 297 + ++++R A +DPLTGL NR + + L +N K A+LF+D DNFK +NDT Sbjct: 691 KKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTK 750 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHK--AYRLGGDEFAMVLYDV-----QSESEVQQICSA 350 GHA GD +L+E+A+RL G +R + RLGGDEF ++L ++ + + +++ Sbjct: 751 GHAVGDLLLVEVAQRLK--GCVREEDTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEK 808 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAK 399 + Q NL + L G++ + SIG A+ AS+ ++L + AD MYQ+K Sbjct: 809 ILQALNLSYMLQ-GYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSK 857 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 87/178 (48%), Gaps = 10/178 (5%) Query: 224 FNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-AL 282 FN +L + + Q +L+ + A DPLTGL NR I + S K+S AL Sbjct: 231 FNQILIQFSQTQSKLR-------KMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFAL 283 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +F+D D FK IND+ GHA GD+ L IA+ L G + RLGGDEF ++ V S Sbjct: 284 MFIDLDRFKNINDSLGHALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPD 343 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + L N+P L N H SIG ++ E SAE L AD MY AK Sbjct: 344 QAADFVDKLLVQLNVPIQL-NEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAK 400 >UniRef50_C5ALJ3 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALJ3_BURGB Length = 381 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 3/155 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 A HD LTGL NRA + N + R L +LD D FK IND +GH GDR+L++ Sbjct: 218 ARHDMLTGLLNRAGLFNAANG-GKRARIRAGMTLFYLDLDGFKPINDAYGHEAGDRLLVQ 276 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A+RL G R+GGDEF +V+ D + E+ +++ A+ + PF+L G + Sbjct: 277 VAERLLRLAGSDALVARMGGDEF-VVVGDCRGEATARELAGAIAREIARPFELAPGIRVQ 335 Query: 369 MTLSIGY-AMTIEHASAEKLQELADHNMYQAKHQR 402 + S+G ++ E + L +AD MY AK + Sbjct: 336 VGASVGITPVSGEDTDIDALLRIADAAMYDAKRNK 370 >UniRef50_A0KMH1 PAS:GGDEF domain protein n=2 Tax=Aeromonas RepID=A0KMH1_AERHH Length = 809 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 6/161 (3%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGH 299 A+ + R A +DPLT L NR + + M ++ ALLF+D D+FK INDT+GH Sbjct: 504 AREEMMRRLAFYDPLTNLPNRRLLQQRLKEAM---ESEAQLALLFIDLDHFKPINDTFGH 560 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 TGD +L +A+R+ R RLGGDEF ++L D E+ + L Q PF Sbjct: 561 ETGDVLLNMVAERMRHCVRERDLVARLGGDEFVILLPDTGDEALA--VADHLHQSLRHPF 618 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAK 399 + + ++ SIG A+ EH + K L AD MYQAK Sbjct: 619 RIDEEQELRISSSIGVALYPEHGTDPKTLMHHADQAMYQAK 659 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATG 302 +LL A +D LTGL NRA ++ ++ S KTS LLF+D DNFK INDT GH G Sbjct: 157 KLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKTSVGLLFVDLDNFKKINDTLGHEVG 216 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D L EI+ RL RLGGDEF ++L D+ S +V+++C + P + Sbjct: 217 DLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDLDSPKQVEEVCERILATAMQPVTI- 275 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 NG++ + + SIG + + L AD MYQAK Q Sbjct: 276 NGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQAKAQ 315 >UniRef50_Q1K4A3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4A3_DESAC Length = 477 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 3/163 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTW 297 +A +L A HDPLTGL NR FR + ++ + T AL F D D+FK IND++ Sbjct: 285 KAIEKRLQHLAHHDPLTGLPNRILFRDRLQHALHKAQRNNTLLALCFFDLDHFKSINDSF 344 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GDRVL IA+RL + A RL GDEF ++L D++ + +Q I S + N Sbjct: 345 GHDAGDRVLTCIAERLEKTIRASDTAARLAGDEFVVILEDLEHQDLIQPIASKILSRINQ 404 Query: 358 PFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAK 399 P + Q +T S+G ++ ++ ++ L AD MY+AK Sbjct: 405 PITVAR-QQVRVTSSLGISLYPLDTLDSDTLLNQADTAMYRAK 446 >UniRef50_B4WG98 GGDEF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WG98_9SYNE Length = 690 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%) Query: 249 ALHDPLTGLANRAAF--RSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 ALHDPLTGL NR+ F R + + ++ A+LF+D D+FK +NDT GH GD++L Sbjct: 210 ALHDPLTGLPNRSYFLQRLEQSVQLTQRNSNHQYAVLFIDLDSFKPVNDTLGHEVGDQLL 269 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 +A R+ RLGGDEFA++L D+ ++E + PF + N Q Sbjct: 270 THVANRIKRLLRKSDLVARLGGDEFAVLLDDIAGKNEAITAVRRIQWHLEQPFTVAN-RQ 328 Query: 367 TTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAEK 405 +++ SIG A++ + + AE + AD MYQAK E+ Sbjct: 329 LSISASIGIALSQLGYQQAESVLRDADTAMYQAKRLAKER 368 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 104/184 (56%), Gaps = 12/184 (6%) Query: 223 DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTS- 280 D LL E+ R QA++ QL A +D LT L NRA F +N L ++ ++TS Sbjct: 625 DTEYLLCIGEDITKRKQAED-QLRHHAFYDTLTNLPNRALF---LNRLAHSIKQVQQTSG 680 Query: 281 ---ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYD 337 A+LFLD DNFK +ND+ GH GD++LI IA+RL R RLGGDEF ++L Sbjct: 681 ELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIARRLEGCLRSRDTLARLGGDEFTILLEQ 740 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE--HASAEKLQELADHNM 395 + + ++ ++ L Q LPF+L +G++ +SIG A++ E+L + AD M Sbjct: 741 INNITDAIKVARHLHQQLMLPFNL-SGNEVFTNVSIGIALSCSRHEQHPEELLQNADSAM 799 Query: 396 YQAK 399 Y+AK Sbjct: 800 YRAK 803 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 3/165 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLDGDNFKYINDT 296 L+ N ++ + AL+D LTGLANR F + + S RK ALLFLD D FK INDT Sbjct: 195 LKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDT 254 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L +A+RL + RLGGDEF ++L D+ V + + + + Sbjct: 255 LGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALK 314 Query: 357 LPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKH 400 P L H+ ++ SIG + + A+A+ L + AD +Y+AK Sbjct: 315 EPIKLKK-HEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKE 358 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 15/167 (8%) Query: 243 AQLLRTALHDPLTGLANRAAF----RSGINTLMNNSDARKTSALLFLDGDNFKYINDTWG 298 +L+ A HD LTGL NR F R G L + K A+++LD D FK INDT G Sbjct: 428 GELMHMAHHDALTGLPNRTLFFDRLRQG---LYKKERSGKMLAVIYLDLDRFKIINDTLG 484 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKA---YRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 H TGD +L E+A RL G+ KA RLGGDEF +++ ++ + ++ + + +F Sbjct: 485 HHTGDMLLKEVADRLR---GVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVF 541 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 + PF L H+ +T S+G + +AEKL + AD MY AK + Sbjct: 542 SAPFRLEK-HEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEE 587 >UniRef50_Q2SK85 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SK85_HAHCH Length = 824 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 20/167 (11%) Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKTSAL--LFLDGDNFKYINDTWGHATGDRVLIEI 309 DPLTGL NR AF SGI + R+ AL LF+D D+FK IN+T+G GD + ++ Sbjct: 373 DPLTGLPNRTAF-SGILEKAVSYTRRQDQALAVLFIDIDHFKRINETYGSKVGDELFRQV 431 Query: 310 AKRLA---------------EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 A R++ EFG + R GGDEF ++L D++ +V + S + Sbjct: 432 ADRISASLRLSDEVARQVMTEFGDMDRVLVRTGGDEFTVLLRDIRKAHQVSLVASRILAS 491 Query: 355 FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKH 400 F+ PF L + H +M++SIG A+ ++ + E L + AD MY+AK Sbjct: 492 FDHPFTL-DEHSVSMSVSIGIALYPVDGQTPELLLKSADLAMYEAKQ 537 >UniRef50_B9QW37 GGDEF domain protein n=2 Tax=Labrenzia RepID=B9QW37_9RHOB Length = 479 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 86/168 (51%), Gaps = 8/168 (4%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA---RKTSALLFLDGDNFKYIN 294 LQ Q ALHD L+GLANR F N ++ S A K A+L D D FK +N Sbjct: 283 LQKSEEQNRYLALHDNLSGLANRLQF----NRVLETSTADLPNKRFAVLHCDLDKFKAVN 338 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT+GHA GD V+ +AKRL E G R+GGDEF ++ S ++ +C AL Sbjct: 339 DTYGHAAGDTVIKIMAKRLNEVVGKPGLVCRIGGDEFMVIYRGGTSRKDLDTLCRALINK 398 Query: 355 FNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 LP + G+ + LSIG A+ + E L +D +Y+AK + Sbjct: 399 ALLPIQIEGGNTAHVGLSIGVAVAPADGTEPEDLVARSDAALYRAKDR 446 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 3/153 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A HDPLTGLANR F I + ++ S AL+FLD D FK IND+ GH+ GD L Sbjct: 692 AFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALK 751 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E+A+RL R GGDEF ++L E E++ I + + P+D+ N H+ Sbjct: 752 EVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDI-NDHEV 810 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 MT SIG A + A L + AD +Y+AK Sbjct: 811 FMTCSIGIASYPKDGREAITLVKNADTALYRAK 843 >UniRef50_Q1PVH4 Conserved hypothetical response regulator protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVH4_9BACT Length = 685 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 3/166 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 ++ +QL+ A HDPLT L NR F+ + + + ALLFLD DNFKY+NDT Sbjct: 251 IKTSQSQLVFLADHDPLTCLFNRRRFKEELELRLLEAQRNHIKGALLFLDLDNFKYVNDT 310 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +LI+++ L E RLGGDEFA++L + + E + Q I L ++ Sbjct: 311 LGHQHGDELLIKLSCILKERLRQTDILARLGGDEFAVILPNTE-EEQAQHISKQLVELTR 369 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 L + + +T+SIG AM H +AE L AD MYQAK + Sbjct: 370 NCLALDSLNPLHITVSIGIAMFPAHGDTAETLLANADMAMYQAKDE 415 >UniRef50_A1K9H7 GGDEF/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K9H7_AZOSB Length = 342 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 8/219 (3%) Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLD---EMEEWQLRLQAK 241 +V AL ++T + + R+ R+ E H A L + E+ + +L+A Sbjct: 109 VVTALADVTALYDTIDRLRDSEHRLQELNADLEHLVAARTAELAERNRELSDAVAKLEAS 168 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 A++ ALHDPLTGL NR R ++ ++ + +LF+D D FK +NDT GH + Sbjct: 169 RARVEHLALHDPLTGLPNRTQLRQVLDEMLALP---GSFGVLFIDLDGFKPVNDTLGHDS 225 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL+ +A+RL E RLGGDEF VL + + L P + Sbjct: 226 GDLVLVTVAQRLREALPAECFVGRLGGDEFVAVLPHTDRAAAC-AVGEKLIAALAAPIVI 284 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAK 399 G Q + SIG A+ +H + L AD MY AK Sbjct: 285 EGGAQCQLGASIGVALGPQHGRNRRSLLTAADRAMYAAK 323 >UniRef50_B0TJQ1 Diguanylate cyclase/phosphodiesterase with GAF sensor n=20 Tax=Shewanella RepID=B0TJQ1_SHEHH Length = 909 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 9/164 (5%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS----ALLFLDGDNFKYINDTWGH 299 QL+ A HD LTGL NR+ F + + + R+ S A+LF+D D FK +NDT GH Sbjct: 472 QLVHDAKHDNLTGLPNRSMFMERLTQAIKH--VRRHSLERFAVLFIDMDRFKLLNDTLGH 529 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GDR LIE AKRL + RLGGDEF ++L + + + + + + + P+ Sbjct: 530 LEGDRFLIETAKRLKQCIRNNDMLARLGGDEFVILLDSISGQQDAEDVAERVLAELSKPY 589 Query: 360 DLHNGHQTTMTLSIGYAMTIEHAS--AEKLQELADHNMYQAKHQ 401 L N Q + SIG AM+ + S +E + AD MYQAK Q Sbjct: 590 QLAN-QQFKSSASIGLAMSGQSRSDTSESILRDADTAMYQAKSQ 632 >UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV29_DESOH Length = 458 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 5/167 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAF--RSGINTLMNNSDARKTSALLFLDGDNFKYIN 294 R + ++ + A HD LTGL NR F R GI D + +A++ LD DNFK +N Sbjct: 280 RRKQTEEEIQKMAYHDALTGLPNRKLFSDRLGIALAQARRDQKGIAAII-LDLDNFKDVN 338 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT+GH GDR+L A+RL+ RLGGDEF ++L D++ +V ++ + Sbjct: 339 DTFGHDVGDRLLQAAAERLSAALRKSDTVARLGGDEFVLILPDLKGTEDVDRVAQKIVDG 398 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKH 400 F PF + + HQ +T SIG A+ +E L + AD MYQ K Sbjct: 399 FRNPFSI-DTHQLIVTTSIGIAVYPRDGISEVLLLKHADIAMYQVKQ 444 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWG 298 A +AQ+ A HD LTGL NR F + L+ K +A L LD DNFK IND+ G Sbjct: 267 AAHAQIHHMAHHDALTGLPNRTLFNERLKQALVRGHQNDKLTAALCLDLDNFKNINDSLG 326 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 HA GD++L + KRL + RLGGDEFA+VL + L + P Sbjct: 327 HAFGDKLLRALGKRLRRELREQDTLARLGGDEFAVVLTGLDGREAACNTAKRLIEAICPP 386 Query: 359 FDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAK 399 F + GHQ T+ +SIG A+ ++ AE+L AD +Y+AK Sbjct: 387 FQI-EGHQFTVGVSIGIAIAPDDNEQAEQLLGYADMALYEAK 427 >UniRef50_C1A7G0 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7G0_GEMAT Length = 825 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 2/159 (1%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 L R A HDPLTGL NR + + + + AL F+D DNFK IND + HA GD Sbjct: 362 LSRRAFHDPLTGLPNRVRMQDIVASSLRRHTDGGMFALAFIDLDNFKQINDYYSHALGDA 421 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L +AKR+ + R+ GDEF +++ +Q ES++ + + + PF++ G Sbjct: 422 LLKAVAKRVTQHIRSGDTLARISGDEFLLLIDPLQDESDLPPLIDRVIEALKQPFEI-EG 480 Query: 365 HQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQR 402 H+ + S+G ++ H A+ E L AD MY+AK R Sbjct: 481 HEIMTSASMGASIYPLHGATYEALCRCADGAMYRAKRDR 519 >UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=Q12PF1_SHEDO Length = 888 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHAT 301 A+L + +LHDPLT L NRA F S I+ + + T A++F+D D FK+IND+ GH Sbjct: 451 AKLDKLSLHDPLTQLPNRAQFMSRIDNAIYYAKQEGTQLAVVFIDVDFFKHINDSLGHVA 510 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD +L+E+A RL+ RLGGDEF++ L ++ S + I + + +F PF Sbjct: 511 GDTILVELANRLSSILHPGAVLSRLGGDEFSL-LTNMASTDNLIAIVNRIFSVFEAPFSC 569 Query: 362 HNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKH 400 NG +T S+G A+ + + L AD M++AK Sbjct: 570 SNGQSIRLTASMGLALYPSDGKDNDGLLRNADAAMHRAKQ 609 >UniRef50_C7HYH8 Diguanylate cyclase with GAF sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HYH8_THIIN Length = 720 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 18/198 (9%) Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 E++A + LD + + + Q R++A A+ HD LTGL NR A + ++ Sbjct: 525 EQVAALLGYGLDELDVKERLSHLQ-RVEAHRAR------HDTLTGLPNRYALEQYLPEVI 577 Query: 272 NNSDARKTSALL---FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 + AR+ +L +D D FK INDTWGH+ GDRVL E+ +RL RLGG Sbjct: 578 --ARARRQGSLFAVGMIDLDGFKLINDTWGHSAGDRVLRELTRRLQAVQRQTDFLVRLGG 635 Query: 329 DEFAMVLYDVQSESEVQ----QICSALTQIFNLPFDLHNGHQTTMTLSIGY-AMTIEHAS 383 DEF +V+ D+ + EVQ L Q PFD+ Q + +SIG A ++ Sbjct: 636 DEFVVVMEDL-NPLEVQTGYANSVQRLRQAVAAPFDIAPNVQLPIDMSIGISAYPLDAQD 694 Query: 384 AEKLQELADHNMYQAKHQ 401 A+ L LAD MY AK + Sbjct: 695 ADTLMRLADKAMYAAKPK 712 >UniRef50_A4X4M8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Actinomycetales RepID=A4X4M8_SALTO Length = 731 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 ALHDPLTGL NR F + + +N+ A + + FLD D FK +ND+ GH GD++L+E Sbjct: 285 ALHDPLTGLPNRTLFFETLGVVFDNAGAGRPVGVCFLDLDGFKAVNDSLGHDLGDQLLVE 344 Query: 309 IAKRLAE-FGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 IA RL++ G H R+GGDEF +++ D +S +V + A P + + HQ Sbjct: 345 IADRLSDCVAGSGHLVARMGGDEFVILVDDGESLDDVVSVAEAALAAVAAPIRIGD-HQL 403 Query: 368 TMTLSIGYA-MTIEHASAEKLQELADHNMYQAKHQ 401 ++ S+G + +L + AD +Y AK + Sbjct: 404 MVSASVGIVECPVNTTDPSELMKAADTTLYWAKAE 438 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 3/162 (1%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGIN-TLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 AQ+ A HDPLTGL+NR + ++ ++ TL ++T A++FLD D FK IND+ GHA Sbjct: 777 EAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHA 836 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD++L+E+A+RL + RLGGDEF +VL +V + ++ L +P Sbjct: 837 LGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGAL-VPRY 895 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 GH T SIG ++ A+ L + AD MY AK Q Sbjct: 896 RIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQ 937 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 251 HDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEI 309 +D LTGLANR FR ++ + + R+ ALL +D D FK IN++ GH GDR+L Sbjct: 528 YDRLTGLANRTQFREHLHKSLTLARLNRQKVALLMIDLDRFKPINESLGHEIGDRLLKAA 587 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 A+R+A+ G + R+GGDEF ++L + SE + Q C L PF L +GH+ + Sbjct: 588 AERMAQHAGGQESLARVGGDEFTLLLENHGSEGSISQQCQQLINAMKKPF-LIDGHELLL 646 Query: 370 TLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 SIG ++ + A A+ + +D +YQAK Sbjct: 647 GASIGISIFPDTAKEAQSMINQSDMAVYQAK 677 >UniRef50_Q1JZA4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZA4_DESAC Length = 556 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 2/164 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 R +A ++ A HD LT L NR F + ++ ++ + +AL+F+D D FK +ND Sbjct: 377 RQKALEDKIWHQAHHDSLTDLPNRVLFYQYLGDVVLHAQRQDIGAALMFVDLDCFKEVND 436 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +L ++AKRL + + R+GGDEF ++L + + + Sbjct: 437 SLGHDYGDLLLQQVAKRLKDSVRQTDQVARIGGDEFTVLLCHTSDNQAILSVAEKVLNQL 496 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 N PFDL NGHQ ++ SIG A + + E L ADH M+ AK Sbjct: 497 NRPFDL-NGHQAQISGSIGIARVCKGHTTETLVRQADHAMFAAK 539 >UniRef50_B1M2P8 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhizobiales RepID=B1M2P8_METRJ Length = 557 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 6/161 (3%) Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 +L+ A D LTGL NR F I ++ S AL F+D DNFK+IND + HA GD Sbjct: 103 ELITKAFIDALTGLPNRTMFEQSIADVLAGSAPGDRFALAFIDLDNFKHINDYYSHAAGD 162 Query: 304 RVLIEIAKRLAEFGGLRHKAY--RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 +L +++ R+ G LR R+GGDEF ++L + E A+++ PF Sbjct: 163 ALLRKMSDRIG--GALRPSDLLARIGGDEFVLLLAPITDRDEALSAVRAISERLKQPF-F 219 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 +GH+ + SIG ++ EH S E L AD+ MY+ K + Sbjct: 220 IDGHEIFASASIGLSLFPEHGDSYETLARQADNAMYRVKGE 260 >UniRef50_A4TY04 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TY04_9PROT Length = 569 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 5/164 (3%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGH 299 + A++ A HD LTGL NRA F + + + + +D+ +A+++LD D FK +ND+ GH Sbjct: 389 REARVRWRAEHDSLTGLCNRAQFEARLADAVRIAADSSSLAAVMYLDLDGFKPVNDSLGH 448 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 A GD+VL +AKR+ RLGGDEF +++ + + +V +I + L PF Sbjct: 449 AAGDQVLKRVAKRIEAAVRGDDVVARLGGDEFVVLVEGLAAADDVARIAAKLVDSLAQPF 508 Query: 360 DLHNGHQT-TMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQ 401 ++ HQ+ T+ +SIG A+ + + L AD MYQAKHQ Sbjct: 509 NID--HQSVTIGVSIGIALFPRDGTNPATLLVAADTAMYQAKHQ 550 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria R... 535 e-150 UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria... 464 e-129 UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepI... 437 e-121 UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP... 435 e-120 UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 421 e-116 UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteob... 414 e-114 UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 411 e-113 UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepaci... 411 e-113 UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 388 e-106 UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acineto... 380 e-104 UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans ... 378 e-103 UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 375 e-102 UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 365 2e-99 UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=ma... 357 6e-97 UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alasken... 355 2e-96 UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 354 4e-96 UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepI... 351 3e-95 UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 349 8e-95 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 349 1e-94 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 345 2e-93 UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extra... 308 2e-82 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 283 6e-75 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 279 1e-73 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 277 4e-73 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 272 2e-71 UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 268 2e-70 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 268 4e-70 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 267 4e-70 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 266 1e-69 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 5e-69 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 9e-69 UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors... 261 3e-68 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 261 3e-68 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 260 5e-68 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 260 5e-68 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 260 7e-68 UniRef50_Q0EY23 Sensory box/GGDEF family protein n=1 Tax=Maripro... 257 4e-67 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 257 6e-67 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 256 1e-66 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 256 1e-66 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 255 2e-66 UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_C5V4E4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 255 2e-66 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 2e-66 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 2e-66 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 3e-66 UniRef50_Q2SF23 Predicted signal transduction protein containing... 254 3e-66 UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 254 3e-66 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 254 4e-66 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 254 4e-66 UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 254 5e-66 UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella ma... 254 6e-66 UniRef50_A8FVX9 Signal transduction protein containing a membran... 253 6e-66 UniRef50_Q0EYI6 Sensory box-containing diguanylate cyclase, puta... 253 7e-66 UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 7e-66 UniRef50_A3Y4T8 Signal transduction protein containing a membran... 253 8e-66 UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL d... 253 8e-66 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 253 9e-66 UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/P... 252 1e-65 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 252 2e-65 UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL d... 252 2e-65 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 252 2e-65 UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors... 252 3e-65 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 3e-65 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 3e-65 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 4e-65 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 4e-65 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 5e-65 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 250 6e-65 UniRef50_A3JAE8 Predicted signal transduction protein containing... 250 7e-65 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 250 7e-65 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 8e-65 UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 248 2e-64 UniRef50_A1K4W6 Conserved hypothetical signaling protein n=1 Tax... 248 2e-64 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 248 2e-64 UniRef50_A0K1H4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 248 3e-64 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 248 3e-64 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 248 3e-64 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 248 4e-64 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 247 4e-64 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 247 5e-64 UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 247 5e-64 UniRef50_A0KMH1 PAS:GGDEF domain protein n=2 Tax=Aeromonas RepID... 247 5e-64 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 247 6e-64 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 7e-64 UniRef50_B1XXC7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 9e-64 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 246 1e-63 UniRef50_Q1N132 Putative uncharacterized protein n=1 Tax=Bermane... 246 1e-63 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 1e-63 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 1e-63 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 1e-63 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 246 1e-63 UniRef50_A5UVR9 Response regulator receiver modulated diguanylat... 245 2e-63 UniRef50_C0QBD5 GGDEF domain family protein n=1 Tax=Desulfobacte... 245 2e-63 UniRef50_B0TJQ1 Diguanylate cyclase/phosphodiesterase with GAF s... 245 2e-63 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 245 2e-63 UniRef50_Q1K038 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_Q478M9 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 245 3e-63 UniRef50_B8KDQ1 Ggdef family protein n=1 Tax=Vibrio parahaemolyt... 245 3e-63 UniRef50_A0KQV8 Gaf domain/GGDEF domain/eal domain protein n=2 T... 244 3e-63 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 244 4e-63 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 4e-63 UniRef50_C7RLE3 Periplasmic/7TM domain sensor diguanylate cyclas... 244 4e-63 UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodi... 244 4e-63 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 244 4e-63 UniRef50_A8G0F6 Diguanylate cyclase/phosphodiesterase n=9 Tax=Sh... 244 4e-63 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 5e-63 UniRef50_UPI0001698C53 response regulator receiver modulated dig... 244 5e-63 UniRef50_Q0A9L9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 5e-63 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 6e-63 UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 243 7e-63 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 7e-63 UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 8e-63 UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 243 8e-63 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 243 8e-63 UniRef50_B5W389 Diguanylate cyclase with PAS/PAC and Chase2 sens... 243 8e-63 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 8e-63 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 9e-63 UniRef50_B8GV15 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 9e-63 UniRef50_C5V7W9 Diguanylate cyclase n=1 Tax=Gallionella ferrugin... 243 1e-62 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 1e-62 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 243 1e-62 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 1e-62 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 242 1e-62 UniRef50_A9CEW9 GGDEF family protein n=1 Tax=Agrobacterium tumef... 242 2e-62 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 2e-62 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 2e-62 UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=... 242 2e-62 Sequences not found previously or not previously below threshold: UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 263 8e-69 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 258 2e-67 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 258 3e-67 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 258 4e-67 UniRef50_UPI0001699903 diguanylate cyclase/phosphodiesterase wit... 257 4e-67 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 257 5e-67 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 256 9e-67 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 256 1e-66 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 2e-66 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 255 3e-66 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 255 3e-66 UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax... 253 6e-66 UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 7e-66 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 253 7e-66 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 253 7e-66 UniRef50_Q8YXJ4 All1219 protein n=4 Tax=Nostocaceae RepID=Q8YXJ4... 253 1e-65 UniRef50_Q2LY94 Sensory box ggdef family protein n=1 Tax=Syntrop... 253 1e-65 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 1e-65 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 253 1e-65 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 252 2e-65 UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 3e-65 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 251 3e-65 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 3e-65 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 251 3e-65 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 251 3e-65 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 3e-65 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 251 4e-65 UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 5e-65 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 250 5e-65 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 7e-65 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 8e-65 UniRef50_Q2BKH4 ATP-binding region, ATPase-like:Histidine kinase... 249 1e-64 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 249 1e-64 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 249 1e-64 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 249 1e-64 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 249 2e-64 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 249 2e-64 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 248 2e-64 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 2e-64 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 2e-64 UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 2e-64 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 2e-64 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 3e-64 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 248 3e-64 UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 248 4e-64 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 248 4e-64 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 248 4e-64 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 248 4e-64 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 248 4e-64 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 247 4e-64 UniRef50_Q3A6T5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 247 4e-64 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 247 5e-64 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 247 6e-64 UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 6e-64 UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 6e-64 UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1... 247 7e-64 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 247 8e-64 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 8e-64 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 247 8e-64 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 246 1e-63 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 246 1e-63 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 246 1e-63 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 1e-63 UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 246 1e-63 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 1e-63 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 246 1e-63 UniRef50_Q3A5N0 Sensory box/GGDEF family protein n=1 Tax=Pelobac... 246 1e-63 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 2e-63 UniRef50_B3E6U2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 245 2e-63 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 2e-63 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 2e-63 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 245 2e-63 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 245 2e-63 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 245 2e-63 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 245 2e-63 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 2e-63 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 245 2e-63 UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tu... 245 2e-63 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 245 3e-63 UniRef50_C4ZM33 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T Rep... 245 3e-63 UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 3e-63 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 3e-63 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 245 3e-63 UniRef50_A4U4H0 Putative uncharacterized protein n=1 Tax=Magneto... 245 3e-63 UniRef50_Q2W736 Response regulator containing a CheY-like receiv... 244 4e-63 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 4e-63 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 244 4e-63 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 244 4e-63 UniRef50_P72843 Regulatory components of sensory transduction sy... 244 5e-63 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 5e-63 UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax... 244 5e-63 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 243 6e-63 UniRef50_C5T8B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 243 6e-63 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 243 7e-63 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 7e-63 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 243 7e-63 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 243 8e-63 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 9e-63 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 243 9e-63 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 1e-62 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 243 1e-62 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 243 1e-62 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 1e-62 UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors... 243 1e-62 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 242 1e-62 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 1e-62 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 242 1e-62 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 1e-62 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 242 1e-62 UniRef50_Q0B027 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 242 2e-62 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 242 2e-62 UniRef50_C6N668 Putative uncharacterized protein n=1 Tax=Legione... 242 2e-62 UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=... 242 2e-62 UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 242 2e-62 UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thioo... 242 2e-62 UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 2e-62 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 242 2e-62 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 242 2e-62 >UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria RepID=YFIN_ECOLI Length = 408 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 408/408 (100%), Positives = 408/408 (100%) Query: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM Sbjct: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 Query: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI Sbjct: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 Query: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH Sbjct: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA Sbjct: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA Sbjct: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD Sbjct: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR Sbjct: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 >UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria RepID=B1JL26_YERPY Length = 436 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 145/399 (36%), Positives = 224/399 (56%), Gaps = 1/399 (0%) Query: 3 DNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTY 62 N NS K PT LR I ++ ++++ + L+V ++ L+ Y NL L A ++Y Sbjct: 16 KNHNSAEKLPTLAGVLRRIHLSVAIVSVVTACIFLTVAALFALRVYVDHNLHLIARAISY 75 Query: 63 SLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISH 122 + EAAVVF D A E LA + + + A++ DK +A W P ++ Sbjct: 76 TTEAAVVFGDNVEANELLALIASNEEVAEAKIIDKHNRQIAYWALPDDGPIHHMEQIVAR 135 Query: 123 WLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 W+ PAP++ P+ H G+ IG++ + S+ F+ LA + C+ +++ +A+ L+R + Sbjct: 136 WILPAPVVLPMFHAGDEIGKIVIVGHGGSLLRFLLQGLAGMLACLTVSTLVALFLSRRML 195 Query: 183 NGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKN 242 G+V +LK IT+V H+V +R+F +RV ++AE + + DFN LL+E+E WQ L +N Sbjct: 196 LGIVGSLKRITEVAHNVSRHRSFGQRVPSAKVAELNELSNDFNGLLEELEVWQKHLTQEN 255 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 L A HD LTGLANR F ++ +N+ + +A+LFLDGD+FK +ND +GHA G Sbjct: 256 DSLAYRAAHDSLTGLANRTFFEGRLSRTLNDCQPGEHTAVLFLDGDHFKDVNDNYGHAAG 315 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D VL IA R+ RLGGDEFA++L + + +V I + LP L Sbjct: 316 DLVLTTIAVRIRALLRETDLVARLGGDEFAVLLTPIHNLDDVLTIADHIIDSMALPIILA 375 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 G + T++LSIG A+ +HA + EKL + AD MYQAK Sbjct: 376 EGCEITVSLSIGIAVYPDHAQTPEKLLQRADEAMYQAKK 414 >UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepID=Q88DZ8_PSEPK Length = 423 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 139/405 (34%), Positives = 208/405 (51%), Gaps = 2/405 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M RPT + L ++ + + L + L++ VL L+ YA NL L A ++ Sbjct: 1 MKPTRKRTVRPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSIN 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 Y++EAAVVF D AA E+LA + + + A+V + + LA W ++ Sbjct: 61 YTVEAAVVFDDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVA 120 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 L P+I PI H + +G + L + S+ F+ LA + C +L++ A L+R L Sbjct: 121 SALLDEPVILPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRL 180 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 + + L+ + V H R R+F RRV E IAE + DFN+LLDE+E W LQ++ Sbjct: 181 LSDITRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQSE 240 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHA 300 N L A HD LTGL NRA F ++ + N+ ++ A+LFLD D+FK INDT GHA Sbjct: 241 NQTLAHQASHDSLTGLPNRAFFEGRLSRSVRNAARQQDHLAVLFLDSDHFKQINDTLGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD VLI +A+R+ + RLGGDEFA++L + + + + I + LP Sbjct: 301 VGDEVLISVAERVRAQLREQDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMELPVQ 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 L +G + +LS+G A + L AD MYQAK +R Sbjct: 361 LDSGRSVSTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRERRG 405 >UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X923_METSD Length = 409 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 122/397 (30%), Positives = 205/397 (51%), Gaps = 2/397 (0%) Query: 10 KRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVV 69 P + LR ++ I ++ L L++ + L+ YA +N+ L A +++Y++EAAV+ Sbjct: 7 PLPRLDQVLRRAHLSVALIAVISSGLALTLAGMYALQAYATQNMQLVARSLSYTVEAAVL 66 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 F D A E L +G++ + V + LA+W +++++ + P P Sbjct: 67 FNDELAVQEALDKVGKREDVAEIRVIGRHGIPLANWKRPETGAFFHLESWLANIVMPEPY 126 Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 P+ H+ TIG +RL + ++ ++ + C+ ++ +A+ L+R +H G+ L Sbjct: 127 YYPVTHDNMTIGRIRLVPHSRLLLEYMVTGISCVFACMAFSTLLALALSRRMHAGISGPL 186 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + D H VR R+F R IAE ++ DFN+L+DE+ WQ ++ ++ L A Sbjct: 187 NILADTAHRVRQYRSFGLRAPAANIAELNQLNQDFNALMDELATWQRHVKREHDTLAYRA 246 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGL NR+ S + + ++ AL+F+DGD+FK INDT+GHA GD VL Sbjct: 247 NHDSLTGLCNRSLLESELEHAVRDARFHSNAVALMFMDGDHFKEINDTYGHAAGDEVLKI 306 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A R++ RLGGDEFA +L ++ + I + P L NG T Sbjct: 307 MALRISGQLRESDIVARLGGDEFAALLKPIKHAEDAVHIAEKIAHQMQSPITLPNGELIT 366 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 +++IG A+ +HA +A++L AD MY+AK Q Sbjct: 367 CSVTIGIALYPDHARTAQELLAAADEAMYRAKDQERG 403 >UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LL52_RALME Length = 426 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 135/401 (33%), Positives = 203/401 (50%), Gaps = 2/401 (0%) Query: 5 DNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSL 64 D+++ +RPT RALR I + I + + + L+ + L+ YA NL L A ++ Y++ Sbjct: 11 DDAVPQRPTLYRALRRIHLGVALIAVFTVGISLTALGLTALRVYADHNLRLVARSIAYTV 70 Query: 65 EAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL 124 EA VVF D AA + L+ + + V D+ + W + L Sbjct: 71 EAPVVFGDAAAAADALSVIAASEDVTRVIVYDRDHQPMTVWQRPGHEQFPALRRVAGDLL 130 Query: 125 FPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNG 184 + QPI H + +G VR+ ++ HF+ L C+LL + +A ++R + Sbjct: 131 ISGAVEQPILHEAQQVGSVRVAGDPVALLHFLLQGTLGLGACLLLTALVAHYMSRRMLRD 190 Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 +V L+N+ V H VRS R F +R+ RI E + + DFN LLDE+E WQ +LQ +N Sbjct: 191 VVNPLRNLMRVAHAVRSERAFGQRMPPARIEELNALSEDFNVLLDELEAWQNQLQHENRS 250 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGD 303 L A HD LTGL NRAAF ++ + + AR A+L+LD D+FK IND +GHA GD Sbjct: 251 LAHRASHDSLTGLLNRAAFTEALDLAVRTAAARNQYAAVLYLDSDDFKGINDRYGHAAGD 310 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 VL+ + +RL RLGGDEFA+++ +++ + +I + P L + Sbjct: 311 AVLVAVGQRLRGCLREGDSVARLGGDEFAVLVNALRAPEDAVRIAEHILNAMATPVCLAD 370 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRA 403 G LSIG A+ HA + L AD MY AK Q Sbjct: 371 GTTIFAPLSIGLAVYPLHARNGTALLHSADAAMYGAKRQSG 411 >UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteobacteria RepID=A0KJG8_AERHH Length = 422 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 140/398 (35%), Positives = 206/398 (51%), Gaps = 2/398 (0%) Query: 9 NKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV 68 N+R T +++L + + + + +LL+ ++L L+ YA NL L A ++Y+ EAAV Sbjct: 9 NQRLTLRQSLGRTHLVTSLTAVCMAGVLLTGIALLALRLYADHNLELVARAISYTSEAAV 68 Query: 69 VFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAP 128 VF D AA E L A+ + A + +LASW P +++ + P P Sbjct: 69 VFHDEEAAREALQAITTHEDVARASIYLPSGQLLASWSRAMSTPWSGLEQYLARLILPGP 128 Query: 129 IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 + QP+ G I + L + F+ +L + C++L++ A+ + R + N L Sbjct: 129 VDQPMLRGGVEIARIHLVGHGQYLLLFLLQTLLAMLLCLVLSTLGALYVARRMQNSLTAP 188 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 LK++ V H V R + RV E IAE H DFNSLLDE+E WQ + +NA LL Sbjct: 189 LKDLAQVAHSVSRQRILAMRVPEANIAELHALGQDFNSLLDELEAWQAHQRRENASLLHQ 248 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LTGL NRA F + ++ + + ALL+LD D FK INDT GHA GD VLI Sbjct: 249 ATHDALTGLPNRALFEARLDQAVTTGRLHDERFALLYLDCDRFKQINDTLGHAAGDDVLI 308 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +A+R+ RLGGDEFA++L + E + + + + Q P L +G Q Sbjct: 309 ALARRVQHQLRPMDLVCRLGGDEFAILLTPLSQVGEAEDVVARIQQAMADPVVLGDGSQL 368 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 +SIG A+ + +A L + ADH MYQAK R E Sbjct: 369 LAAVSIGIALYPDQGLTAADLLQQADHAMYQAKRLRRE 406 >UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBF5_DICDC Length = 423 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 178/397 (44%), Positives = 255/397 (64%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 N TF++AL I+M + ITM++ W+L++ S+ + KQYA KNL L A T++ + Sbjct: 10 NTPHCAGNATFRQALTRINMLVVIITMVVSWMLITAASLFSFKQYADKNLQLLAYTLSRN 69 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 +EAAVVF DG AA E LA+LGQQ QF A + D + N+L +W ++ FS F S W Sbjct: 70 VEAAVVFRDGTAANEMLASLGQQEQFRRAVLSDAKGNVLTNWRAAEQEEPGWFSLFTSRW 129 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 LF + Q I H G+ +G + + D++I F+ FSL LT CILLAS +AI ++ LH Sbjct: 130 LFRGSVKQSIYHRGQLVGYLEIAGTDTTIRQFVSFSLLSLTLCILLASILAIFISHRLHR 189 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 GL++AL NI +VVHD+R+NR+FSRR+ + +IAE F D NSLLDE+E WQ +++ +N Sbjct: 190 GLIQALHNIAEVVHDIRNNRHFSRRIPKVKIAELDSFGHDLNSLLDEIESWQQQMRKEND 249 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 LL +L DPLTGLANR AF + ++ + + ++ALLF+DG++FK+INDT+GHA GD Sbjct: 250 SLLERSLRDPLTGLANRTAFLGALGNILADRHHQTSAALLFMDGNSFKHINDTYGHAAGD 309 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +VLI IA RLA + + A RLGGDEFA++L D+ S+V+++ ++ Q P L Sbjct: 310 QVLIAIANRLARYSRKQDLAARLGGDEFALILADIHDVSDVERVADSIRQAMQEPIPLDE 369 Query: 364 GHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKH 400 + +++LSIG AMT + E L AD MY K Sbjct: 370 SLKVSISLSIGIAMTEPEMTPEALMAQADKAMYLDKQ 406 >UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepacia complex RepID=B1YZK2_BURA4 Length = 422 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 130/398 (32%), Positives = 199/398 (50%), Gaps = 2/398 (0%) Query: 10 KRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVV 69 RPT + LR + F+ + + + L V +V+ L+ YA NL L A ++ Y++EAA+V Sbjct: 14 PRPTLQSVLRRAHLRLAFVAVAMAAVSLIVVAVIALRAYAGNNLNLLARSLGYTVEAALV 73 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 F D AA E +A + + V + + + A+W + ++ P P+ Sbjct: 74 FGDRVAANEAIATIANDEDVAQVVVTNARGQLFATWKLPAEGRIARIERGVADLALPGPV 133 Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 P+ H+G +G+V + R F+ + + GC++++ A ++ L +V L Sbjct: 134 TIPVMHDGIVVGQVIVRGRGHQFFGFLLGGIGGILGCLVVSVLGAYVSSKRLLRNIVAPL 193 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + + V H VR R F RRV IAE ++ DFN+LLDE E+WQ L+ +NA L A Sbjct: 194 RALAGVAHAVRRERAFGRRVEPAAIAELNQLGDDFNALLDEFEDWQNTLRDENASLEHKA 253 Query: 250 LHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGL NRA F S ++ + ++ + A+L+LD D FK IND GH GD VL+ Sbjct: 254 THDALTGLPNRAQFESRLSVALCDAVVTGQRVAILYLDCDRFKEINDCLGHDAGDAVLVG 313 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A RL RLGGDEFA++L V+ V +I + +L +G Sbjct: 314 VAGRLRTQVRETDLVARLGGDEFAVMLGTVREVESVCRIADEILSGMVPSIELPDGRMVA 373 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 +S G A+ +HA A L AD MY+AK R Sbjct: 374 TMMSAGVALYPDHASDANGLLRAADAAMYRAKRTRPGT 411 >UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z8H3_EDWTE Length = 388 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 220/387 (56%), Gaps = 4/387 (1%) Query: 18 LRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAAT 77 + I + I +T++L + LS+ S+ TL+ YA+ NL L A T++Y+ EAAVVF D PAA Sbjct: 2 FQRIHIMIIAVTLLLAGIPLSLLSLFTLRTYAEHNLHLVAMTISYTSEAAVVFNDKPAAL 61 Query: 78 ETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNG 137 + L + ++ Q + A + D Q + W+ + ++ + + WL P+ + PI HNG Sbjct: 62 DALNMIAKREQIAEATITDVQHQVWVRWNSSTPS-HESLNRLLRGWLLPSSVSGPIEHNG 120 Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + IG V L A S + F+ + L L C++L + +++ L R +H G+V+ L I V Sbjct: 121 QLIGFVTLKADGSMLMRFLGYLLLGLLCCLILIALLSLYLVRRMHAGIVDELYAIAKVAR 180 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 VR R +S RV +IAE + FNSLL E+E L +N L ALHDPLTGL Sbjct: 181 QVREQRTYSLRVPHSQIAEIEELSRGFNSLLTEVESQHTLLINENGVLTYKALHDPLTGL 240 Query: 258 ANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 NR F + + + + ++ ++FLDGD FK +NDTWGHA GDRVL+E+A RL++ Sbjct: 241 PNRTCFMNMLESF---NPRQERVCVMFLDGDGFKAVNDTWGHAAGDRVLVEVASRLSQQI 297 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 RLGGDEFA++L ++++ E +++ + Q P L NG + +MT SIG+ + Sbjct: 298 RKTDMVARLGGDEFAILLRNIEAPREAERVARGILQAVPQPIVLSNGVRVSMTFSIGFTL 357 Query: 378 TIEHASAEKLQELADHNMYQAKHQRAE 404 + H+ L + AD MY++K + Sbjct: 358 SSPHSQPAALLDKADAAMYRSKQRGGG 384 >UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHB3_ACIJO Length = 412 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 3/394 (0%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 + + ++ + +T+ + L+ V S+ T+ YA+++L + +AT++ ++ Sbjct: 3 RKSSNTSLQKIFSQSQLLIFALTLGICSLIFVVISIYTMNTYAKQSLNIFSATLSEQIQP 62 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 AV+F D +TL QQ +V + Q LA + + N F Sbjct: 63 AVIFNDSITLQQTLNNHIQQYPIRAIQVINLQGKPLAEAYKPTPE-FAWMENLFDKVFFK 121 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 P+ + I+H G + + + + F + L L+ I + I + L + L+ Sbjct: 122 HPVTRTIKHQNNQYGTLIIYGSATQLMSFFFQLLICLSAGIFVILLIMLWLVHSTYQKLM 181 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 +++ + + V + + + R+ I EF + FN+LLD+++ +LQ++N+QL Sbjct: 182 HSIQPMVNTVESLNLDTQYQARLPSSPIYEFRVISGAFNNLLDKVQRTNEKLQSENSQLS 241 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 ALHD LT L NR F + + + + +T AL F+D +NFK IND +GH GD VL Sbjct: 242 HQALHDQLTELPNRHYFYNILFNQFEHPEKNQT-ALFFIDNNNFKNINDVYGHLAGDAVL 300 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 E+A+RL + RLGGDEFA++L +++ ++ IC L + P + HQ Sbjct: 301 KEMAQRLKKNVRSHDVVARLGGDEFAILLRNIKHYDHLELICEHLIECSKAPLYF-DQHQ 359 Query: 367 TTMTLSIGYAMTIEHASAEKLQELADHNMYQAKH 400 + SIG A + + E L AD+ MY+AK+ Sbjct: 360 IHFSFSIGVAFSKCATTPEDLIAEADNAMYKAKN 393 >UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW99_DELAS Length = 409 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 118/398 (29%), Positives = 188/398 (47%), Gaps = 2/398 (0%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 SL+ + + +R + + + L LL + V TL+ Y NL L A ++ Y++EA Sbjct: 4 SLSGNASLRNVIRRAHLRMAAVAIALAGALLLIVGVATLRLYLSNNLHLVARSLAYTVEA 63 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 ++VF D A L L + + AEV D + W + ++ + Sbjct: 64 SLVFGDRDEAARVLDQLLRGEGVAHAEVFDAEGRPFVRWSGHGGSALSSIGELLAVGIGL 123 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 +R +G +G V+L + + F+ VL C+ ++ + + +R + + Sbjct: 124 PRAEADVRQDGRLVGSVQLASDGVGLVRFLGAGFIVLVLCVGVSGYVGLRQSRRMLRDIA 183 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 E L+ + V VR +R+ +RV RIAE +FN+LL E++ RLQ +N+ L Sbjct: 184 EPLQQLARVARAVRHDRSMDQRVPLARIAELRELGDNFNALLAELQTRHERLQQQNSALE 243 Query: 247 RTALHDPLTGLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATGDRV 305 R A D LTGLANR F + ++ +++ + A+LFLD D FK +ND +GHA GD + Sbjct: 244 RQASRDSLTGLANRLHFEQRLQQALDSAAESGQKLAVLFLDNDRFKQVNDAYGHAVGDVL 303 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L + RL RLGGDEFA++LY V + Q + + P + G Sbjct: 304 LKAVGARLRSQVRETDLVARLGGDEFAILLYPVGGGGDAQMVRDKIEAAMREPLVVSEGV 363 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 ++S G A+ +H S E L AD MYQAK R Sbjct: 364 VLQPSVSAGVALFPKHGQSMETLMRHADQAMYQAKAMR 401 >UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T2V1_9BURK Length = 410 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 131/405 (32%), Positives = 201/405 (49%), Gaps = 2/405 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M + T + + ++ + + L LL + ++ L+ YA NL L A ++ Sbjct: 1 MTRTGAAGPGDTLRAVVHRAHLSMALLAVALAGALLLMAGLVALRVYAGNNLHLVARSLA 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 Y++EAAVVF D A+ETL + + A V D + + A WH + + ++ Sbjct: 61 YTVEAAVVFGDRQDASETLRRMVVDEGVAEARVMDARGAVFAEWHAEQGGLAGRLAPAVA 120 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 + P+ PIRH GE G V L + + +F+ LA L C+ ++ + + L+R + Sbjct: 121 AMVGLQPVSVPIRHEGEDNGSVVLRSDGMGLLYFLGTGLAALALCLAVSGAVGLVLSRRM 180 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 +V L+ + V VR + RV RIAE DFN+LL E+E Q LQ + Sbjct: 181 LRDMVVPLQALASVARSVRRDHVQGLRVPPARIAELDALGDDFNALLQELEHRQALLQQR 240 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHA 300 N L ALHD LTGL+NR+ F + + ++ + A + ALLFLD D+FK +NDT GHA Sbjct: 241 NIALTHQALHDGLTGLSNRSHFEQHLQSRLDEARGAGTSVALLFLDNDHFKAVNDTHGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD +L+ +++RL RLGGDEFA+V+ V + +++ S + + P Sbjct: 301 AGDALLVAVSQRLRAQARDTDLVARLGGDEFAIVMAPVAGLRDAERMISRVQEAMRDPVT 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 L NG Q +SIG AM H L AD MY+ K +R Sbjct: 361 LDNGVQLQPAVSIGVAMFPLHGQDMGALMRFADMAMYRVKAERHG 405 >UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QBT8_9ENTR Length = 404 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 142/401 (35%), Positives = 221/401 (55%), Gaps = 3/401 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M +N ++ + + LR IS + + ++L WLLL TS+L +K Y ++NL L A T++ Sbjct: 1 MKFENIKTEKSSIRNKLRKISTINAAVILLLCWLLLFSTSMLFIKSYEKRNLELIANTLS 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 SL AA VF D A + + LG QG FS A++ +Q +L W D F + Sbjct: 61 TSLTAATVFEDSYDAKKKVLLLGSQGMFSAAKLTSSEQTVLVDWQDNTNDD-SRFQRTLR 119 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 HW++ P+ + H +G + L+ ++++ FI +S+ +L+ ++ ++ ++ L Sbjct: 120 HWIYAEPLTVNVTHEDAVVGTLTLSGTVTNVADFIEYSVIILSCSMIFVFIVSFLVSELL 179 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 H G++ + +NIT +H V + +FS R+S EF F+ D NSLL E++ + L Sbjct: 180 HRGILASFRNITSTIHYVIRSGDFSPRISGSSTKEFQVFSEDLNSLLAEVQTLKASLLRD 239 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 N L AL DPLTGLANRAAF S ++ L++ A++ LLFLDGD FK INDTWGHA Sbjct: 240 NKSLAAKALKDPLTGLANRAAFISKLSQLLDQQLAQENFVLLFLDGDRFKSINDTWGHAA 299 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL IA RL+ RLGGDEFA+++ + SE +QQ+ + + + Sbjct: 300 GDEVLQSIATRLSGLVTKSDLVARLGGDEFAILITSMTSEEALQQLTARIEASITQKIAI 359 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQR 402 G T +++IGYA + S + E AD +MY K++ Sbjct: 360 SAGVNITTSVTIGYAWSQHGDSVTSILERADMHMY--KNKG 398 >UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YD55_9GAMM Length = 669 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 100/399 (25%), Positives = 178/399 (44%), Gaps = 14/399 (3%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 F + L + +I +++ LL S + + ++ ++ + S +A+VF D Sbjct: 11 FFYKQLIAVVGINILTLLIMAGLLYSSF-ITAYEDNLKEVMSSKIRLLAASSTSALVFDD 69 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII-- 130 +A L++L + ++ D + + A + + +F S F I Sbjct: 70 RESAVTLLSSLKEHTATRYVQIYDADRQLFAEYRRPGQLVDVDIDDFESDAFFKNKNIYM 129 Query: 131 -QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 QPI N E +G + ++A +S++ + + + + ++ +A L L L + Sbjct: 130 SQPILMNSEYLGVIVISADTNSLNEQKNHYILIASAVLFISLLLAYLLNWQLQKRLTAPI 189 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + +V V N+ + RR++ R E L N++LD +E A QL + A Sbjct: 190 SELMKLVGYVAKNKKYHRRLNNARDDEIGDLTLGVNTMLDTIE-------AHETQLFQRA 242 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIE 308 +D LT L NR + +N + KT ALLFLD D FK IND+ GH GD +L++ Sbjct: 243 NYDELTQLPNRHLLMERLAHGINTATRNKTEIALLFLDLDRFKVINDSLGHRVGDELLVQ 302 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A +L R GGDEF M+L ++++ ++ I + + P + GH Sbjct: 303 VAGKLVRTLRKSDSISRWGGDEFVMLLENIKNVKDINNIVEKIVEELAKP-TMTGGHLLH 361 Query: 369 MTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 ++ SIG A + L + AD +MY+AK + K Sbjct: 362 VSTSIGIARFPQDGDDSLSLLKHADISMYRAKAKGPGKF 400 >UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GWL0_SPHAL Length = 408 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 173/377 (45%), Gaps = 5/377 (1%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 + R T ++ L + L L + + V L+ YA +N+ L A Y +E Sbjct: 12 RIGARTTLQKLLSRFHFGITLFAVALSGLTILLAGVTALRGYADRNMELAAQLGAYGVEP 71 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 A+VF D AA E + L + + V D + W DP + +S FP Sbjct: 72 ALVFNDPVAAREGIEPLTRIPGITRLRVIDDVGRPVIEWKSPAGDP----APLLSRTFFP 127 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 P +R NG IG V + S++ ++ L C+L+ + I L R LV Sbjct: 128 RPFAVTVRRNGSAIGTVEVWGDSSTLIDYVRLGLLAGLACLLVTALGTIFLARRFEYELV 187 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + L I V HDVR +R F +RV IAE R D N+LLDE++ WQ ++++ A L Sbjct: 188 KPLNEIATVAHDVRLHRRFDKRVKPLGIAELDRLGGDINALLDELQGWQGHMESERALLA 247 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRV 305 A HD LT L NRAAF + + + AR ALLF+D DNFK ND +GHA GD V Sbjct: 248 HRASHDTLTALPNRAAFDEQLALRIAAAKARDGRFALLFIDADNFKAANDNFGHAAGDAV 307 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L+ I+ + A R+GGDEF +++ + + L P L +G Sbjct: 308 LVAISACIRNTLRKDDFAARIGGDEFVVIIDPFDVGVVPADLANRLRACIADPITLPDGE 367 Query: 366 QTTMTLSIGYAMTIEHA 382 ++S+G A+ + Sbjct: 368 SYRASVSVGVAVFPDDG 384 >UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q087E2_SHEFN Length = 681 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 175/406 (43%), Gaps = 19/406 (4%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 T + L+ I M+ I+ + + + S + + K+ ++L + ++ ++ AA++F D Sbjct: 9 TISKKLQFILMSVALISTLTVTSIFSAFELSSAKREQVESLHSLSQMLSPNITAALLFDD 68 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQP 132 A E + + + + V + + +LA K P T ++ +I P Sbjct: 69 QDAIQELINPILLRSDVLSVSVTNVEGAVLA--QALSKRPSMTLTD--DDLNDITQVITP 124 Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 + + + G++ ++ DS I+ I F + +L + + L+ L + + + Sbjct: 125 LTLDNQNYGDLHISVDDSIITDRISFYGQFIVLLLLSSLCASFFLSLFLRRKFLSPMLYL 184 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL-----------RLQAK 241 + + ++++S R + E + FNS+LD +E+ + L+ Sbjct: 185 AKISQKITESQDYSLRAQIQSEDEIGQLTTCFNSMLDNIEQRESSLETEVKLRTGELENA 244 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 N+QL A D LT L NR F + +L++ AL+F+D D FK IND+ GH Sbjct: 245 NSQLHEYAYQDGLTLLPNRRYFYEKLQSLIDT--DHMVFALIFIDLDGFKEINDSLGHEY 302 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GDR+L ++AKRL RLGGDEF +++ DV I + + Sbjct: 303 GDRLLHQVAKRLRGCVRDHDTVARLGGDEFTLIIEDVSDLEHAASIAEKVKSSLMQCISI 362 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 Q +T SIG + E L + AD MY +K + + Sbjct: 363 EE-VQVNVTGSIGLTFYPADGQNVEALVKHADQAMYLSKSKGRNRY 407 >UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepID=B2HZ17_ACIBC Length = 366 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 169/358 (47%), Gaps = 8/358 (2%) Query: 45 LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILAS 104 ++ YA++NL L + T+ ++ AVVF D + L + D + +++A Sbjct: 1 METYAKQNLQLLSHTLLERIQPAVVFNDKITIEQILNEYTNDHSIRAIHIYDSEHHLIAQ 60 Query: 105 WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHF---IWFSLA 161 + + HW P+ I H+ + +GE+ L I F I LA Sbjct: 61 -SFKLSSQTSVLEKWFDHWFLNEPVHLTIYHHQQNVGELTLFGSSEKILQFLKMIMVGLA 119 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 + I+ A ++ LT + +++A+ +T++ V + ++ R RI EF Sbjct: 120 IAMLFIVCALWWSVNLT---YRQIMQAIYPLTNIAQIVSEQKAYNLRFPYNRIKEFQDLN 176 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSA 281 FN LL+E++ W +LQ +N +L A HD LT L NR F + + + D SA Sbjct: 177 TVFNELLEEIQIWDNQLQKENRKLSFQAHHDQLTLLPNRHYFYQILLDMFEDKDFDNKSA 236 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSE 341 LLF+D +NFK IND +GH GD VL E+AKRL + RLGGDEFA++L+ + Sbjct: 237 LLFIDNNNFKSINDQFGHLAGDEVLKEMAKRLQTRLRHQDFIARLGGDEFAVILHSITHA 296 Query: 342 SEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAK 399 + I L + P L N + S+G A++ +S E AD MY+AK Sbjct: 297 DHLISIAENLLESCKEPLHL-NDQTIYFSFSVGIALSQFASSPEDFIMQADQAMYKAK 353 >UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WC9_PSEA6 Length = 703 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 105/417 (25%), Positives = 182/417 (43%), Gaps = 18/417 (4%) Query: 6 NSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLE 65 + L + F++ L I T++ I + +L+ S V + K + A+ ++ + Sbjct: 4 SKLRRASFFQKQLMAIIGTNLLILAIAAFLIYSAF-VDDYRDNLVKTMDSNASLLSAASR 62 Query: 66 AAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLF 125 +A++F D A LA+L + A++ D ++ A++ + F Sbjct: 63 SALLFHDEHAGQTILASLAKIPAMRFAQLLDSEKKRFATYTRDDASWDVMLDDIKPGHFF 122 Query: 126 PAP---IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 + Q I + +G + L+A S+ ++ L S +A L + Sbjct: 123 TNDNLYLTQDITLGEDVLGYIVLSADTHSLQAQQRRYGRIVLWVFALGSLLAYLLNWRMQ 182 Query: 183 NGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRL---- 238 L +K + +V V + +R+ R + R NS+LD +EE Q +L Sbjct: 183 KRLQSPVKRLIHLVDYVAKEGRYDQRIFNRRQDDIGRLVNGINSMLDTIEEHQSKLSEHH 242 Query: 239 -------QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNF 290 + + QL A D LT L NR + I+ + + RKT AL+FLD D F Sbjct: 243 EHLEGLVELRTEQLYERANFDALTQLPNRHSLTEKISQAIEIARERKTNLALMFLDLDRF 302 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K IND+ GH GD++LIE+AK++ R GGDEF +++ + + S V + Sbjct: 303 KVINDSLGHFMGDKLLIEVAKKIQHKLSDSDVVGRWGGDEFVVLIQNPKELSSVDSLAKE 362 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +LP + +GHQ ++ SIG A + A L + AD +MY+AK + Sbjct: 363 IIASLSLPL-IVSGHQLHISTSIGIACFPDDGDDASSLLKHADTSMYKAKELGPGRF 418 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 101/416 (24%), Positives = 175/416 (42%), Gaps = 26/416 (6%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADG 73 KR L I M +++ + + + +++L A + + +A+VF D Sbjct: 14 LKRKLMLIIMLCCCASLLAASIFFLTRDAKGVYRVQREDLVSLAEIIGANSASALVFDDP 73 Query: 74 PAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKD----PGDTFSNFISHWLFPAPI 129 +A T+A L + V + I+A P + S A + Sbjct: 74 ESAQRTIAPLASKRSILAVYVLTSEGQIMARHVAPEAGNAELPLERLGASPSPAAVLAAV 133 Query: 130 -------------------IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLA 170 +QP+ + E +G V + A + ++ V +L+ Sbjct: 134 ETIRKTAEKKSAVPGFDCLVQPVYFDYERVGTVVIHADTELFRKNLRWTATVTLLFMLVT 193 Query: 171 SGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE 230 A + L + L ++ + DV +++N++ RV++ E FN +L E Sbjct: 194 VIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAKPSDDEIGLLYDGFNEMLSE 253 Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 +EE L+ + A L + A +DPLT L NR F + +N ++ R+ +++F+D D+ Sbjct: 254 IEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDH 313 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK INDT GH TGD +LI++A RL+ RLGGDEF + +V + + + Sbjct: 314 FKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAA 373 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 L +F PF L + +T SIG + + ++L AD MY AK Sbjct: 374 KLNALFAKPFQLGES-EIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGKN 428 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 101/406 (24%), Positives = 180/406 (44%), Gaps = 23/406 (5%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADG 73 K + ++ +F+T ++I + + T K L + A ++ ++ A+V+F D Sbjct: 9 IKPKILASTLGIVFVTTLVIDVAIFAMQYHTAKTNLDARLNIEANIISQNISASVLFDDE 68 Query: 74 PAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPI 133 +E L++ EV D + + + H T+ ++F I +PI Sbjct: 69 KTTSEILSSFKSDPAILKVEVLDLAEKVFSE-HVTKDGYIVGGADF--------SISKPI 119 Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 +G+ IG + + D+ IS I ++ +++A G+A L+ + + E++ + Sbjct: 120 VFSGDEIGTLVVYVSDAEISSGISKTILFSITTLVIALGVAFLLSLAVQGMIFESILALH 179 Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW-----------QLRLQAKN 242 + V R++S R E R A FNS+L+++E+ L L+ Sbjct: 180 NTSQRVAKTRDYSLRAEIFSEDEIGRLAKTFNSMLEQVEQRDAMLEKQVSHRTLELEKLA 239 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSAL-LFLDGDNFKYINDTWGHAT 301 + A HD LTGL NRA + ++ + L LD D+FK INDT GH Sbjct: 240 EEFRFRAFHDNLTGLPNRALLNERFGLCIEHARRCGNKFVCLLLDLDDFKTINDTKGHDY 299 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD +LI +A+RL RLGGDEF ++ D+++E + +QI + + + + Sbjct: 300 GDELLIGVAQRLKASVRAEDLVCRLGGDEFIILATDIETEFDARQIANNILFALSEDIVI 359 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +SIG A+ +H + L+ AD MY AK + Sbjct: 360 KDDK-IKTAVSIGGAIYPQHGETVGVLKRHADVAMYHAKDGGKNRF 404 >UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XC99_METSD Length = 682 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 98/398 (24%), Positives = 165/398 (41%), Gaps = 15/398 (3%) Query: 18 LRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAAT 77 L+ I + I + + L+ S LT + +L A + +L AAV F D A Sbjct: 18 LQFIVTATALIVVFAVMLVFQYQSALT---DIENDLNAQAEILKSNLSAAVAFEDKKTAD 74 Query: 78 ETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNG 137 E L++L + AEV + + + + + I Sbjct: 75 EILSSLRLVPSINRAEVYLYNGSRFSHYAKEANPHAPDIRIPYTGLHRMNRRYELI-LEQ 133 Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + + + + + ++ + V+ LLA A + L+ + E L ++T V Sbjct: 134 KPLAILYIEINLNKLNARLGLFALVVLMAGLLAMLAARLIAARLNLLITEPLSSLTTFVS 193 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLL-------DEMEEWQLRLQAKNAQLLRTAL 250 V + +N+ R + R EF A + +L +E+ + + QL + A Sbjct: 194 RVSAEQNYGLRTNMARRDEFGTLAKGIDGMLLSLYNHGKRLEDELSQRKLAEEQLDKLAY 253 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARKTSA-LLFLDGDNFKYINDTWGHATGDRVLIEI 309 +D +T L NR F + ++ ++ R+ S L+F+D DNFK +NDT GH GD +L E Sbjct: 254 YDTVTHLPNRHFFNEQLTLMLEHAAQRQQSCYLMFIDLDNFKSVNDTLGHLAGDSLLREA 313 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 R+ + R+GGDEFA++L D Q S + SA+ +F+ F + N H+ + Sbjct: 314 GSRILQTLVPGSILCRIGGDEFAIILRD-QPLSAIDATASAIIALFSEKFVI-NAHEVFV 371 Query: 370 TLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 SIG + A L AD MY AK Sbjct: 372 GASIGISNFPADADHVSGLLRNADTAMYWAKADGKNTF 409 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 151/369 (40%), Gaps = 19/369 (5%) Query: 54 ALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFST-AEVRDKQQNILASWHYTRKDP 112 L ++ L ++ D + + + + V D + +L + P Sbjct: 47 ELFLDSIDVMLRNSLYSLDVNSIVKLVQEFNEHQAVIETVRVFDAEGRLLIE-STEKYLP 105 Query: 113 GDTFSNFISHWLFPAPIIQ------------PIRHNGETIGEVRLTARDSSISHFIWFSL 160 +T + + I PI T+G + + + I Sbjct: 106 LNTQPDSFGQKIVNHQTILYQQSDDYLVAAKPIIFGQRTVGAIAIKLSKEPLKQKIAAVR 165 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRF 220 + +A I L + + L L + H + + N S R+ + EF Sbjct: 166 SQGLIIAAVAGSGGILLALFISHSLTVPLNQLIKATHRI-TTGNLSYRIHLKNKDEFFLL 224 Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT- 279 A +FN + D +EE + Q NA+L HD LTGLANR I + A + Sbjct: 225 AKEFNQMSDWLEETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEIKEKKANQDH 284 Query: 280 -SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 A+LFLD D FK IND+ GH GD VLI IA+RL A RLGGDEF +++ ++ Sbjct: 285 CFAVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGDEFVILIKNL 344 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQ 397 +V QI + + + P L N Q +T+SIG ++ E + +A+ L AD MY Sbjct: 345 SDIKQVTQIADRILKQMSEPLILEN-QQLVITMSIGVVVSQENYENADDLLRDADITMYH 403 Query: 398 AKHQRAEKL 406 AK Q + Sbjct: 404 AKQQGKAQY 412 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 182/410 (44%), Gaps = 39/410 (9%) Query: 15 KRALRNISMTSIFITMMLIWLLLSVTSVL--------TLKQYAQKNLALTAATMTYSLEA 66 + +L M + T + + +LLS+ ++ + A++ LA+ T Sbjct: 13 RHSLSAKLMNWVLFTALAVGVLLSIGQIIFESMRAVEEMDNEARQTLAIVRDPAT----Q 68 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 AV D A + L L ++ A + Q LA +T S +++ +F Sbjct: 69 AVYSIDPDLAQQVLEGLFEKPSIRYAAISHPNQTTLAELSKP---LLETQSRWMTDAIFG 125 Query: 127 ----------APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAIT 176 P QP + GE+++ ++ ++F ++L L + + Sbjct: 126 KEREYAISLFRPTPQPTYY-----GELKIVVD-TAPKSALFFERSILIFMTGLLRALLLA 179 Query: 177 LTRHL--HNGLVEALKNITDVVHDVRSNRNFSRRVSEERI---AEFHRFALDFNSLLDEM 231 HL H L LK I + + + + + R E + NSLL + Sbjct: 180 FVLHLVYHFLLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAANSLLQSI 239 Query: 232 EEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNF 290 EE Q + QA A++++ + +D LTGL R+ F + I +++S+A + A+ + D+F Sbjct: 240 EEHQQKRQAAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDF 299 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K IN+ G++ GD++L A+RL H RLGGD+FA++L++V S V + Sbjct: 300 KSINEQLGYSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAES 359 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 L + + PF++ T ++ +IG A+ + A AEK+ + A+ M AK Sbjct: 360 LLREISRPFEIEE-QLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAK 408 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 147/355 (41%), Gaps = 26/355 (7%) Query: 77 TETLAALGQQGQFSTAEVRDKQQNI--------LASWHYTRKDPGDTFSNFIS-----HW 123 + ++ + + A + ++ + I +A+ + IS + Sbjct: 284 QSLIQSIADKTRVPAANITEQSKQISPLDAQLIVANMSTMPDQSSHRNTKTISVISKQDF 343 Query: 124 LFPAPIIQPIRHNGETIGEVRLT-ARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 L + + +T+ +V + + +I+ S +L I + A + Sbjct: 344 LLGEAVNVSVFIIPKTLWKVVVVTPQMVAINSASKVSNLILMLLIAIMIIAAFLGFIYCR 403 Query: 183 NGLVEALKNITDVVHD--VRSNRNFSRRVSEERIAEFHRFALDFNS--LLDEMEEWQLRL 238 L+ + + + + + + + + R EF A FN + + L+L Sbjct: 404 RSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKL 463 Query: 239 Q-----AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKY 292 Q QL ALHDPLTGL NR F+ + + SD + A+ F+D DNFK Sbjct: 464 QINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKI 523 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 INDT GH GD +L +++ RL+ G RLGGDEFA ++ V + + L Sbjct: 524 INDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGGDEFAFIITKVNTIEDAVTFAQRLN 583 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKL 406 + P ++ NG+ M SIG + + A++E+L AD MYQAK + Sbjct: 584 SLLKTPIEI-NGNNINMGSSIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTV 637 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 19/291 (6%) Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 + P++ L +SS I + LA G AI L + + + Sbjct: 319 VTPLQDQHGLDWLSVLVIPESSFMAQIDANTRTTLLLCFLALGCAIYLGVCTASWIARPI 378 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME--------------EWQ 235 + + S + F + V+ + E FN + ++++ + Sbjct: 379 LRFSQASQAISSGQ-FDQTVAVKGFKEIGVLQQSFNRMAEKLQATFSDLEAANLALTKEV 437 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYI 293 Q Q ALHDPLTG NRA F + + + A+LF+D D FK + Sbjct: 438 AERQRAEEQFKHLALHDPLTGFPNRAFFMEQLERAVKQTQRHSQYLFAVLFIDLDRFKIV 497 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND+ GH GD++L IA +L RLGGDEF ++L ++ ++ ++ + Q Sbjct: 498 NDSLGHEVGDQLLGAIAHQLHSLVRATDIVARLGGDEFVILLEPIEEVNDAVRVADRIVQ 557 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRA 403 + P DL N Q ++ S+G A+ + +++ A + AD MY+AK++ Sbjct: 558 ELSAPIDLSN-RQVFISASVGIALSSPDYSQATDILRDADIAMYRAKNRGK 607 >UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TF3_RHOFD Length = 572 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 4/241 (1%) Query: 166 CILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFN 225 IL+ +AI L + ++ L+ + D + S + +S R E A N Sbjct: 327 IILVLGVLAILLAALVSRAVIGPLRKMVDAMSAF-SKEHVVNELSAARKDEIGLLASSLN 385 Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLF 284 + + + L+ L A HD LTGL NRA F + ++ + KT ALLF Sbjct: 386 DMQNIIVANMRDLKESRQALEHLAQHDSLTGLPNRALFDDRLRQAVSQARRDKTRMALLF 445 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D D FK INDT GH GD +L AKR+ R+GGDEF ++L V+ + + Sbjct: 446 VDLDAFKDINDTCGHHVGDLLLNAAAKRMQACVRHADTVGRMGGDEFVVLLTHVEEDQDA 505 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRA 403 + + + + PFDL +G + SIG A+ EH S E L AD MY AK Sbjct: 506 VLVAEKICKALSQPFDL-DGRSLLIGSSIGVALYPEHGSDELTLSRSADAAMYLAKESGG 564 Query: 404 E 404 Sbjct: 565 N 565 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 128/318 (40%), Gaps = 9/318 (2%) Query: 95 RDKQQNILA--SWHYTRKDPGDTF-SNFISHWLFPAPIIQPIRHNGETIGEVRLTAR--D 149 +A SW ++ S S P+ N +T + + A + Sbjct: 216 THPIGQPIAAESWQAAQQARDPGLVSAVASDGRVKRLAFYPMYLNSQTTPYLFMWAGIPE 275 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHL-HNGLVEALKNITDVVHDVRSNRNFSRR 208 I + + + ++ L R LV+ L + H+ ++ + Sbjct: 276 QQILAPANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPWQLP 335 Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + AE + + F ++ +E + +L A HD LTGLANR ++ Sbjct: 336 SQYCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLD 395 Query: 269 TLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 + A+L +D D F+ IND+ GH GDR+L +I KRL + RLG Sbjct: 396 HAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLG 455 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-K 386 GDEFA+VL D+ +E + + L + + P + N H +T SIG ++ + Sbjct: 456 GDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDN-HHIVVTASIGISLFPNDGNDSIT 514 Query: 387 LQELADHNMYQAKHQRAE 404 L AD MYQ+K + + Sbjct: 515 LLRNADLAMYQSKRHKGD 532 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 10/234 (4%) Query: 180 HLHNGLVEALK---NITDVVHDVRSNRNFSRRVSEERI----AEFHRFALDFNSLLDEME 232 +H G+ LK I ++ + +N + + + A+ ALD +L + Sbjct: 440 KIHGGIALPLKSEGKINGILGIIYIEKNQNLESNNLSLLTGFAQLASIALDNANLYQAAQ 499 Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFK 291 + + L A HD LT L NR F ++ +N + K A++FLD D+FK Sbjct: 500 QELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFK 559 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 +NDT GH GD++L IA+R ++ R+GGDEF ++L+++ + + Sbjct: 560 KVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKI 619 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 P+ + N H+ +T SIG A+ + AE L + AD MYQAK Sbjct: 620 IDTLANPWIIGN-HEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRN 672 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 12/290 (4%) Query: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 + L+ + + + + V + + L I + ++ L R Sbjct: 410 ADRLYHSFFYRENKLREDVGWTVVMEVSIVPYLKELMSKLNTNFLSIYALALLSFLLARF 469 Query: 181 LHNGLVEALKNITDVVHDVRSN--RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRL 238 L + + ++ + D + + N +N + IAE F + + + Sbjct: 470 LTSISTKPVQKLADAIGVITRNLEKNPPLNLPGTNIAEIKELTESFRDMAN-------KA 522 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTW 297 + +L + A DPLTGL NR R I + ++ ++ + A+LF+D D FK +NDT Sbjct: 523 MSYLEELKKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTL 582 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GDR+L+++AKRL+ R GGDEF V+ DV+ +V Q+ + +F+ Sbjct: 583 GHDVGDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFST 642 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF+ NG ++ S+G A+ ++ + +L + AD MY+AK + Sbjct: 643 PFE-ANGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGKSNF 691 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 90/172 (52%), Gaps = 2/172 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 +A + + A +DPLTGL NR + ++ M+ + R ALLFLD D FK +ND Sbjct: 561 RKAAEDDIRQLAFYDPLTGLPNRRLLQDRLHQAMSQARRERGRLALLFLDLDKFKPVNDD 620 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GH GD +L +A+RL RLGGDEF ++L +++ + + + Q F Sbjct: 621 FGHQAGDELLQAVAQRLQACVRESDTVARLGGDEFVLLLPSIEAAQDAMAVAEKIHQAFG 680 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKLV 407 PF L G TM+ S G A+ EHAS E L AD MYQAK ++ V Sbjct: 681 RPFTLSAGRNATMSFSTGIAVYPEHASDEKALMRHADEAMYQAKAAGRDRFV 732 >UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BSH2_9GAMM Length = 604 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 3/171 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 + + +L A HD LT L NR F + + + + A++F+D D FK +ND Sbjct: 428 KRKQNEELILHQAHHDALTNLPNRILFVDRLKQALLTAKRHQGRVAVMFIDLDRFKSVND 487 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L E+A+RL RLGGDEF +VL +Q+ S+++ I + + Sbjct: 488 TLGHDFGDLLLKEVAQRLIACIRESDTVARLGGDEFTVVLTQIQNISDIRIIAQRMLKSL 547 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEK 405 + PF + ++ + SIG A + AE L + AD MYQAK + Sbjct: 548 SQPF-IQKDNEAFIGGSIGIAFFPKDGQEAETLVKKADIAMYQAKQEGRNT 597 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 R + ++ A +D LTGLANR F ++ +M S R+ AL+FLD D FK +ND Sbjct: 240 RRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVND 299 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GHA GD +L + A+RL E RLGGDEF ++L D + ++ + ++ + + Sbjct: 300 TLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKAL 359 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + PFDL + + S+G A+ + A L AD MY AK + Sbjct: 360 SSPFDLGV-REVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTF 410 >UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEB0_TOLAT Length = 543 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 3/220 (1%) Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 E + D V + + R + + + + ++ E L+ + Sbjct: 320 EPIYGSADKVLGTFAIYHHDRHSPKPEDIKLIEASANLAAIAIERYHAVEALRQSEEKHR 379 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRV 305 R A +D LTGL R F + M ++ K AL+FLD D FK +NDT+GHA GDR+ Sbjct: 380 RLAHYDVLTGLPTRVLFSDRLKQAMRSAKRNKKNLALMFLDLDKFKPVNDTFGHAVGDRL 439 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L E+A R+ R+GGDEF ++L+DV + + Q N PF L GH Sbjct: 440 LKEVASRMLGCVRESDTVCRIGGDEFVILLHDVADAESAFNVAEKIRQALNQPFKLA-GH 498 Query: 366 QTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 Q ++ SIG A+ E+ E L + AD MY+AK + Sbjct: 499 QMNISCSIGIALYPENGVDERTLTKNADMAMYRAKENGRD 538 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 131/325 (40%), Gaps = 51/325 (15%) Query: 128 PIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVE 187 P IRH IG + L + + S+A + + + + + L+ L + Sbjct: 163 PEAGKIRH---VIGYLHLAVNQRGLLLEVLPSIAWVVAACVTFAVLCLMLSLSLTRRITS 219 Query: 188 ALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLD------------------ 229 + + + + S + V E A N ++ Sbjct: 220 PISRLAKLADGIASGK-LEEPVKVTGGGEVEEIAAILNGVITGISNYKKEMDVDHQLLSM 278 Query: 230 EMEEWQLRLQAKNAQL--------------LRTALHDPLTGLANRAAFRSGINTLMNNSD 275 ++EE +L +N +L + A +D LT L NR F ++ L+ + Sbjct: 279 KVEERTSQLSKRNQELNTAVKQVTRTKNRLRKMAYYDALTSLPNRRLFTEQLSLLLKLAQ 338 Query: 276 AR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY---------- 324 +T ALLFLD DNFK IND+ GH+ GD +L E+ +RL++ Sbjct: 339 RNKQTLALLFLDLDNFKRINDSLGHSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAKID 398 Query: 325 --RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA 382 RLGGDEF +VL D+ + V + L + P L +GH+ +T SIG A+ EHA Sbjct: 399 VSRLGGDEFTVVLNDLDAPESVGVVAERLILALSEPM-LIDGHELVITPSIGIAIAPEHA 457 Query: 383 S-AEKLQELADHNMYQAKHQRAEKL 406 + E L +D MY AK Sbjct: 458 NEVEGLLRCSDTAMYHAKASGKSTY 482 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 159/411 (38%), Gaps = 23/411 (5%) Query: 9 NKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV 68 + + N+ + + + I+++ V+ KQ ++ AV Sbjct: 3 GRFKSLTWKQTNLVVFTALFFAIAIFVVEIALVVIATKQQLTTTQQELLDSVEQPAANAV 62 Query: 69 VFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL---- 124 D A +TL + +A + ++ S +K+ TF + + Sbjct: 63 WALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNDSQTFISLSNKLFDDLK 122 Query: 125 -FPAPIIQPIRHNG----ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTR 179 P+ +P G + IG + + +++ ++ L L + + + Sbjct: 123 EISRPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTLVLS 182 Query: 180 H-LHNGLVEALKNITDVVHDVRSN---RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 H L + + I++ + + + N + + E FN +L + + Q Sbjct: 183 VVFHRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQTQ 242 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIN 294 ++L + A DPLTGL NR I + S K+ AL+F+D D FK IN Sbjct: 243 -------SKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNIN 295 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GHA GD+ L IA+ L G + RLGGDEF ++ V S + L Sbjct: 296 DSLGHALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQ 355 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 N+P L N H SIG ++ E SAE L AD MY AK + Sbjct: 356 LNVPIQL-NEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSN 405 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 65/172 (37%), Positives = 89/172 (51%), Gaps = 3/172 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDT 296 L K Q+ A HD LTGL NR F + ++N + A A++FLD D FK IND Sbjct: 471 LYEKQKQVEHLAFHDALTGLPNRRKFEKDLKNILNTAQASANDVAVMFLDLDRFKKINDR 530 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +LIE+AKRL + R GGDEF ++L D+ SE I + I N Sbjct: 531 LGHGIGDLLLIEVAKRLRGCLRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNILN 590 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 PF + + + ++T SIG AM + +L + AD MY+AK + V Sbjct: 591 KPFFIKD-EELSITPSIGIAMYPDCGTDVTELMKNADMAMYRAKANGKNRFV 641 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 2/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 +L+ A+L ALHDPLTGL NRA +++ + ++ T ALL LD D+FK +ND Sbjct: 641 QLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVND 700 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 ++GH GD +L +++ RL + RLGGDEF ++L + S +V + + Sbjct: 701 SFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHAL 760 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + PF L N + + SIG ++ EH +AE+L + AD MY+AKH + Sbjct: 761 HQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGY 812 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 15/240 (6%) Query: 179 RHLHNGLVEALKNIT--DVVHDVRSNRNFSRRVSEERI-AEFHRFALDFNSLLDEMEEWQ 235 RHL + K I+ V H ++S + + +R E + + N++ + EE Sbjct: 432 RHLSTLQTKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEIT 491 Query: 236 L---------RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFL 285 + +L A HD LTGL NR+ F + ++++ A+LF+ Sbjct: 492 HFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFI 551 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK+INDT GH GD +L ++A+R+ RLGGDEF +++ + S + Sbjct: 552 DLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAIS 611 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 I + PF++ G++ ++ SIG ++ E A L + AD MYQAK + Sbjct: 612 LITQKIISACEKPFNIK-GNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKS 670 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLD 286 + + ++ Q L + L A HD LTGL NR F + + ++ AL F+D Sbjct: 366 ISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERHLGKLALFFID 425 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 DNFK IND+ GH GD+VL+ ++KRL RLGGDEF +++ + + +V Sbjct: 426 LDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTIIMENFKDVQQVSV 485 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + + ++ N P + GH ++ SIG + + +A L + AD MY+AK + Sbjct: 486 LAQKIQKVLNQPMHI-EGHTLYISCSIGISFYPQDTQNANDLVKYADAAMYKAKEEGRNN 544 Query: 406 L 406 Sbjct: 545 F 545 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDT 296 ++ A+L A HDPLTGL NR F + + ++ + + + A+LFLD D FK+IND+ Sbjct: 796 IKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDS 855 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L IA+RL E RLGGDEF ++L + S+ I + L FN Sbjct: 856 LGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFN 915 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF H+ + SIG ++ + L AD MY++K + ++ Sbjct: 916 APFQAGE-HEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRV 965 >UniRef50_UPI0001699903 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699903 Length = 592 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 R + Q+ A +D LTGL NR+ + +N+++ ALLF+D D FK +ND Sbjct: 277 RRKESEQQIRFQANYDALTGLPNRSLLLDRLTHAINSAEREAWELALLFVDLDQFKIVND 336 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GH GD +L A+RL R GGDEF ++L D+ + QI + + Sbjct: 337 TFGHVMGDELLQHAAERLKSCVRESDTVARFGGDEFIILLQDISGADDAAQIADKVIEKL 396 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L G + + SIG + + A ++ L AD MY+AK + Sbjct: 397 SR-YFLLAGREVIIGASIGITLFPDDASDSDTLLRNADMAMYRAKETSRNRY 447 >UniRef50_Q0EY23 Sensory box/GGDEF family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY23_9PROT Length = 544 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 3/171 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + +A +L+ A D LTGL NR ++ M ++ +K A++FLD D FK +ND Sbjct: 368 KRKAAEKELVHMAHFDLLTGLPNRPLLYDRLDMAMAHAHREKKKLAVMFLDLDGFKEVND 427 Query: 296 TWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 GH GD VL E+A RL + RLGGDEFA++L ++ +V+ I + + + Sbjct: 428 QLGHQAGDEVLQEVAHRLQQCVGRQTDTVARLGGDEFALLLGTIKDGQDVETIAARVIES 487 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 P L +G + SIG A+ EH S ++L +D MY AK Sbjct: 488 LGEPVMLSDGQPCNIGASIGIAIYPEHGLSQDELLSNSDTAMYSAKENGKN 538 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S ++ +S ++A+ ++ ++ ++ + +L +L A HD LT L N Sbjct: 643 KSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKL----SEERLQFLANHDALTHLPN 698 Query: 260 RAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 RA + I+ + + KT A+LF+D D FK INDT GH TGD +L E AKRL E Sbjct: 699 RALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLR 758 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF +++ D + I + PF L G + ++ SIG ++ Sbjct: 759 ETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILV-GRELFISASIGISVY 817 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + L + AD MY+AK Sbjct: 818 PDDGLDTASLLKHADAAMYRAKESGKNTF 846 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 85/173 (49%), Gaps = 5/173 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 L+ + QL A HDPLTGL NR ++ + + +T A+ F+D D FK IND Sbjct: 890 ELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNIND 949 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GDRVL E+A RL RLGGDEF +V+ DV + V I + + Sbjct: 950 TLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVL 1009 Query: 356 NL-PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P + H+ + SIG ++ + AE L + AD MY+AK + Sbjct: 1010 QASPVTVE--HEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTY 1060 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 3/224 (1%) Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 + V S+ +R + + L E+E L + ++L Sbjct: 604 LHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESKL 663 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDR 304 A HD LTGLANR + + M+N+ T A+LF+D D FK IND+ GH GD Sbjct: 664 RYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDT 723 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L +A RL E RLGGDEF ++L +E+ ++ S + P + +G Sbjct: 724 LLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRI-DG 782 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 H+ +T SIG + L AD MYQAK Sbjct: 783 HELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYC 826 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 89/189 (47%), Gaps = 4/189 (2%) Query: 219 RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK 278 R D +EE ++ + A +D LTGL NR F + + + K Sbjct: 166 RLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 279 T-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMVLY 336 A++FLD D FK INDT GHA GDR+L+ +AKRL R GGDEF + L Sbjct: 226 RPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLS 285 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNM 395 + + + + +F PF + +G++ +T SIG ++ S + L + AD M Sbjct: 286 AISDVKDAFTVAQKIIDVFRTPFVI-DGYELFITTSIGISVYPHDGRSGDALVKNADVAM 344 Query: 396 YQAKHQRAE 404 Y+AK Q Sbjct: 345 YRAKEQGRN 353 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 + + A HD LTGL NRA F +N + ++ + A+ FLD D FK INDT Sbjct: 640 RKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRFKVINDT 699 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GD++L ++A+RL R GGDEF ++L VQ+ ++ +I L Sbjct: 700 LGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIAERLLASLK 759 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L GH +T S+G A+ L AD +Y+AK + L Sbjct: 760 PPFSLK-GHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGL 809 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 13/256 (5%) Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEE 212 SL + I++ + I + ++N L LK I + + ++ S N+ R+ Sbjct: 313 LRNNRQSLVAILFFIIIVTFITSLV--IINNMLSIPLKKILNGI-EIISKGNYENRIDIT 369 Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 E + FN++ DE+ + QL A DPLT + NR F + ++ Sbjct: 370 SKDELGAISSQFNNMADEIA-------KRETQLDELAHVDPLTKIPNRVMFIETLEKSIS 422 Query: 273 NSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEF 331 + T A+ FLD D+FK +NDT GH GD++LIEIAK L+ R+GGDEF Sbjct: 423 RAKRLNTKLAVFFLDLDDFKNVNDTLGHYVGDKLLIEIAKNLSIVMRESDTISRIGGDEF 482 Query: 332 AMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQEL 390 +++ D++S S + +I + +P + N + T++ SIG ++ + L + Sbjct: 483 NILIEDLESLSHIGEIAEKFIKQMTIPLYIEN-NAITISGSIGISIYPDDGEDTTTLLKN 541 Query: 391 ADHNMYQAKHQRAEKL 406 AD MY+AK + Sbjct: 542 ADLAMYKAKDNGRNQY 557 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 + + R A HD LTGL NRA F+ +N +N++ + A++FLD D FK++NDT Sbjct: 268 RKKVEEVITRQAYHDTLTGLPNRALFKDRLNVALNHAKRNQQQLAIMFLDLDRFKWVNDT 327 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L +A+RL+ + R+GGDEF ++L+D+Q + + + + Sbjct: 328 LGHFYGDELLKHVAQRLSGCLRAQDTLARMGGDEFTLLLHDLQQPEDASLVAAKIVDELK 387 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L + + ++ SIG A+ +H E L + AD MY K + Sbjct: 388 RPF-LLDEREIFISSSIGIALYPDHGDTIETLIKSADIAMYHVKWRGKNGY 437 >UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SS1_RHOFD Length = 571 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 7/259 (2%) Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 + I+ F+ + T IL + R + + ++ + R+ + + Sbjct: 309 TQITGFMAHEVIGKTPAILSSGKHQEIFYRKMREDIAATGHWQGEIWNRRRTGETYPEWL 368 Query: 210 SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT 269 + ++ + + ++ +A Q+L A HD LTGL NRA F ++ Sbjct: 369 TINAVSNDDGEVTHYVGVFSDITTR----KAAEEQVLFLAHHDGLTGLPNRALFADRLHQ 424 Query: 270 LMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 + ++ + A++FLD DNFK NDT GH GD++L +A+RL RLGG Sbjct: 425 AIVHAHRDRAKVAVMFLDLDNFKQTNDTLGHHIGDQLLQMVAQRLTNCMREGDTVARLGG 484 Query: 329 DEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKL 387 DEF +VL + + ++ + + + P L +GH+ +T SIG ++ + + ++ L Sbjct: 485 DEFTVVLESITNTGDIAYLSQKIIDTVSHPL-LLDGHEIAVTCSIGVSVYPDDSEESDDL 543 Query: 388 QELADHNMYQAKHQRAEKL 406 + AD MY+AK Sbjct: 544 IKYADTAMYRAKEGGRNNF 562 >UniRef50_C5V4E4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4E4_9PROT Length = 352 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 4/182 (2%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFL 285 ++ + + +R + + +L A +DPLT L NRA + + + + T AL+FL Sbjct: 152 MIGTLSDITVR-KNIDERLRYMAHYDPLTNLPNRALLSERLQQSVVRARRDQSTMALMFL 210 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK +NDT GH TGD++L ++A RL R+GGDEF ++L+ + E + Sbjct: 211 DLDKFKPVNDTLGHETGDQLLQQVAVRLLSCVRASDTIARIGGDEFVVLLHAIDQEPDAA 270 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAE 404 + + N PF + H+ ++ SIG A +H + EK L AD MYQAK + Sbjct: 271 MVAEKILHSLNRPFSIGE-HEIRISGSIGIAAYPQHGTDEKLLLINADIAMYQAKKEGRN 329 Query: 405 KL 406 Sbjct: 330 SY 331 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 6/219 (2%) Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALH 251 + ++ ++ + E I R A + + E R + +QLL A + Sbjct: 176 LCNISERKKTEEMLHQAYDELEIRVAERTAELVKANQKLLTEITER-KRAESQLLHLAFY 234 Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWGHATGDRVLIEI 309 D LTGLANRAAF + ++ +N S A+LF+D D FK IND+ GH GD++L+ Sbjct: 235 DILTGLANRAAFMNRLSHAINYSKRHSNYLFAVLFIDLDRFKVINDSLGHLNGDQLLLAT 294 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 A RL A RLGGDEF ++L +Q S+V + + Q LPF+L G + + Sbjct: 295 ASRLQVCVRSIDTAARLGGDEFTILLEGIQDVSDVITVAERIQQELALPFEL-EGQEVFI 353 Query: 370 TLSIGYAMTI--EHASAEKLQELADHNMYQAKHQRAEKL 406 T SIG A++ ++ E++ AD MYQAK Q + Sbjct: 354 TASIGIALSSTLDYKHPEEVLRDADTAMYQAKVQGRARY 392 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + QL R A HD LTGL NR F + ++ R A+LFLD D FK IND Sbjct: 295 ERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIIND 354 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L ++A R+A R+GGDEF ++L +V + +V+++ + + Sbjct: 355 TLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTL 414 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 PF++ + H+ +T SIG ++ ++L + AD MY K + + Sbjct: 415 AAPFNI-DTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNV 465 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 4/170 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNFKYIN 294 +L+ QL A +D LTGL NR+ F + + + A+LFLD D FK +N Sbjct: 293 KLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEYCIKRVKRHPDQIFAVLFLDLDRFKVVN 352 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GHA GD++L+EIA+RL RLGGDEF ++L ++ S+ +C + Q Sbjct: 353 DSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDEFTVLLEGIKDLSDALLVCGRIQQS 412 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRA 403 N PF+L NG + +T+S G A++ + E+L AD MY+AK Sbjct: 413 LNCPFNL-NGREVLITVSTGVALSTMGYDDPEQLLHNADAAMYRAKALGK 461 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 8/210 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 ++ + S I + F + +++ E + + + A +D LTGL N Sbjct: 225 KNGELYWASASISPITNGNEQITHFIAFQEDITER----KQAEETIKQMAYYDTLTGLPN 280 Query: 260 RAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG- 317 R F ++ + + A+LFLD D FK+INDT GH GD++L A RL E Sbjct: 281 RHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCR 340 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 R R GGDEF ++L D+ E ++ + F F L + + ++ IG ++ Sbjct: 341 RDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPD-IELFISTCIGISI 399 Query: 378 TIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 E L + AD MY+AK Q + Sbjct: 400 FPNDGRDTETLIKNADMAMYRAKEQGRSRY 429 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S ++ ++ I + H + ++ ++ E + ++ A HD LT L N Sbjct: 344 KSGELYAAWLTISAIKDSHGRTTQYAAIFSDITED----KRNQERIKHQAYHDALTDLPN 399 Query: 260 RAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R F + + + A+LFLD D FK INDT+GHA GD +L +A RL Sbjct: 400 RLLFIDRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVR 459 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF ++L + S + ++ + P+ +T SIG A+ Sbjct: 460 DSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVC 519 Query: 379 I-EHASAEKLQELADHNMYQAKHQRAEKL 406 + AE L AD MY+AK Q Sbjct: 520 PTDGEEAETLMHNADAAMYRAKAQGRNHY 548 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 2/169 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTW 297 + +L A HD LTGL NRA F + + + + A+LFLD D FK++ND+ Sbjct: 1347 KKLEDKLAYQAFHDALTGLPNRALFMDRLKGALARAKRYNSCCAVLFLDLDRFKHVNDSL 1406 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++LIE+ RL R GGDEF ++L + +Q+ + + Sbjct: 1407 GHQYGDQLLIEVGNRLLSVVRSADTVARRGGDEFTILLEPICELEYAKQVAERVIKELEK 1466 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKL 406 PF L NG + ++ SIG A++ E++ AE+L AD MY AK + + Sbjct: 1467 PF-LINGQELYISTSIGIALSNEYSDAEELIHNADVAMYWAKSRGRARY 1514 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 L+ N ++ + AL+D LTGLANR F + + + RK ALLFLD D FK IND Sbjct: 194 ELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRIND 253 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L +A+RL + RLGGDEF ++L D+ V + + + + Sbjct: 254 TLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKAL 313 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 P L H+ ++ SIG + + A+A+ L + AD +Y+AK ++ Sbjct: 314 KEPIKLKK-HEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRY 364 >UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E241_GEOLS Length = 557 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 7/216 (3%) Query: 195 VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLR-TALHDP 253 V ++ + + R I+ L F + + Q + + A L+ A D Sbjct: 331 VSPEIVRTKLYGFRKILLLISSVLIVLLAFLARQVALNALQ---REETAALVHAMAFRDA 387 Query: 254 LTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGL NR +N + ++D A+LFLD D+FK +NDT GH GD++L +++ R Sbjct: 388 LTGLPNRRLLEDRLNQSIASADRNAGKVAVLFLDLDHFKAVNDTLGHEVGDQLLKQVSGR 447 Query: 313 LAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLS 372 L E RLGGDEF ++L ++ S +V + + Q + PF + G Q + S Sbjct: 448 LQEAVRKSDTVARLGGDEFILLLLNITSHQDVDSVADKVIQAISRPFSIA-GQQAQVGTS 506 Query: 373 IGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKLV 407 IG A+ E E L AD +Y+AK + V Sbjct: 507 IGIALYPEDCTDPESLVAFADKALYKAKQSGRNRYV 542 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 2/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 +L+ +L A HDPLT L NR S + ++ + R A++FLD D FK +ND Sbjct: 513 KLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVND 572 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD +L +A RL RLGGDEF ++L V++ ++ + L ++ Sbjct: 573 SLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVL 632 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L NGH+ + SIG + + L AD MY+AK Q Sbjct: 633 AAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTY 684 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 6/209 (2%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S + + ++ +A+ + ++ ++ +L+ A+L +DPLT L N Sbjct: 593 KSGELYPQILTINTVADSQGRPSHYVGVMTDIS----QLKQSEARLEHLVHYDPLTNLPN 648 Query: 260 RAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R +S + + +D + A+LF+D D FK +ND+ GH +GD +L +A+RL+E Sbjct: 649 RRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVR 708 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF ++L ++Q + + +L + PF L NG + + SIG ++ Sbjct: 709 EDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLY 768 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L + AD MYQAK + Sbjct: 769 PDDGHTVTDLIQHADVAMYQAKEEGRNTY 797 >UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSP1_THISH Length = 882 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 87/172 (50%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 R + AQ+ ALHD LTGLANR R + + + R + ALLF+D D+FK +ND Sbjct: 707 RRKEAEAQIRHMALHDNLTGLANRTLLRDRLTQAIEQARRDRNSLALLFIDLDDFKPVND 766 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GDRVL E+A+RL R+GGDEF ++L ++ E Q+ + Sbjct: 767 THGHEAGDRVLKEVAQRLRAAVRRVDTVARMGGDEFVILLQALEQEDMAIQVAEKIIDSL 826 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + P L NG + S+G A+ H + L AD +YQAK + Sbjct: 827 SRPIQL-NGQTCLLGASVGIALHPRHGEDHDGLMRAADQALYQAKSAGKNRY 877 >UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QQF1_PERMH Length = 784 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLI 307 A +D LTGL NR F + + + + + A++FLD D FK +NDT+GH GD +L Sbjct: 619 AFYDGLTGLPNRLLFYNRLQHTLLRARRNREYVAVMFLDLDGFKQVNDTYGHDIGDELLK 678 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E+ KRL RL GDEF +++ ++ S V I + F PF + NG++ Sbjct: 679 EVGKRLQHTVRKIDTVARLAGDEFTVIIENLNSPENVNVIAKKILNSFKEPFVI-NGNKI 737 Query: 368 TMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKLV 407 + SIG A+ + A+ L + AD MY AK + V Sbjct: 738 NVGTSIGIAVFPLDGTDADTLIKNADMAMYLAKKSGKNRYV 778 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 22/262 (8%) Query: 156 IWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIA 215 + + + ++T + + + H ++ L + + +N + V Sbjct: 292 MSWLVTIITLSTVAFAIPLLIFLSHFQ--IIRPLNKLHHAFLRLGNNVELIQ-VKTSGDD 348 Query: 216 EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD 275 E + +FN + L+L N ++ A +DPLTGL NR F +N + ++ Sbjct: 349 ELNELGKEFNRM-------SLKLFKSNEKIRELAFNDPLTGLPNRFMFTKHLNLSLESAK 401 Query: 276 -ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG---------LRHKAYR 325 R A++F+D DNFK+IND+ GH +GD++L EI RL R Sbjct: 402 CDRGQLAVMFIDLDNFKHINDSLGHQSGDQLLHEIGDRLHRNLRSKDFCEHFSDSDMVAR 461 Query: 326 LGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SA 384 LGGDEF + L ++ S + +++ + +I + P L +G ++ SIG A ++ + Sbjct: 462 LGGDEFTVFLGELPSINIAEKVAKRILEIISQPI-LLSGKSYYISASIGIACYPQNGVTT 520 Query: 385 EKLQELADHNMYQAKHQRAEKL 406 ++L + AD MY AK + Sbjct: 521 QELIKNADIAMYHAKKKGKGGY 542 >UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K6P1_AZOSB Length = 690 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 94/426 (22%), Positives = 154/426 (36%), Gaps = 33/426 (7%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 + K+ L + + + I LL + L A + + + + E V+ + Sbjct: 8 SLKQRLLMVVLVPAAVLAATISGLLLIRDTQALDDAATERGIAIVSFLAPAAEYGVISGN 67 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDT---------FSNFISHW 123 T L A+ Q + + + ++LA R D T Sbjct: 68 RTNLTALLQAVLGQRDVAAVAIYNPDGSVLAVSGKPRLDDVSTMRRTHGPTTLERGDDRI 127 Query: 124 LFPAPIIQPIRH----------------NGETIGEVRLTARDSSISHFIWFSLAVLTGCI 167 F AP+ QP G +G V + S+ + + Sbjct: 128 SFAAPV-QPTPLVIDDLPGGDVDGTAAAGGGPLGWVYVEVDTRSLIERKRDLVLGTLAIV 186 Query: 168 LLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSL 227 +L + L + E L + + V + + AE FN++ Sbjct: 187 VLGLALTAAFALRLARSVAEPLARLVEAVKQMAAGNLEVSVPDSGAGAELQALETGFNAM 246 Query: 228 LDEMEEWQLRLQAKNAQ----LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALL 283 M + LQA+ + L ALHDPLTGL NR AF + + S S +L Sbjct: 247 ARTMADAHKTLQARVDEATELLAHQALHDPLTGLPNRRAFEQALEDAVTASRRAGDSGVL 306 Query: 284 -FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 F+D D FK +NDT GHA GD +L IA+ + + R+GGDEFA++L+ Sbjct: 307 CFIDLDRFKIVNDTCGHAAGDELLRRIARLIRQRVRAEDLICRIGGDEFALILHGC-GPE 365 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQ 401 + +I + + G + ++ SIG A+A + AD Y AK Sbjct: 366 DAHRIAENIREAVAAFRFTWEGRRFSVGASIGLVRIDGSLATASDVLVAADLACYAAKKS 425 Query: 402 RAEKLV 407 ++V Sbjct: 426 GRNRVV 431 >UniRef50_Q0EYI6 Sensory box-containing diguanylate cyclase, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYI6_9PROT Length = 800 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 3/171 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIN 294 + + +L + A +D LTGL NR F +N + + K A++FLD D+FK IN Sbjct: 621 IERKQSEERLQQLAHNDMLTGLPNRTLFYDRLNQALALAQRHKQAFAVMFLDLDHFKEIN 680 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GD +L E A RL R+GGDEF ++L + V+++ L + Sbjct: 681 DTLGHDMGDLLLREAATRLRSCVRSMDTVARMGGDEFTIILTETAVREAVEKVAEKLLRE 740 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF L NG + SIG A+ +H +E L + AD MY AK +R Sbjct: 741 LQQPFSL-NGEIRHVGCSIGIALYPKHGLDSETLIKHADIAMYDAKRERNS 790 >UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CD40_ACAM1 Length = 1197 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 4/175 (2%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNF 290 E + LL ALHD LT L NR F + + + A+LFLD D F Sbjct: 455 EDASERKQTEQALLHDALHDGLTQLPNRVLFMDRLEQACRSFQRHPDEIFAVLFLDLDRF 514 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K INDT GH GD++L+ +A RL RLGGDEF ++L ++ + I Sbjct: 515 KIINDTLGHMVGDQLLVAVAHRLQTCLRPEDTVARLGGDEFTLLLPNIDQAEDAMHISDR 574 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 + Q PF L + + +T+SIG AM+ + L AD +Y+AK Sbjct: 575 ILQSLKEPFTL-DHTEVFITVSIGIAMSGNPEQKPDDLLRHADIALYRAKANGKG 628 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 3/179 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 ++E + + QL+ A HD LTGL NR ++ + + + L+FLD D Sbjct: 355 VKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDR 414 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +ND+ GH GD +L ++ RL RLGGDEF +VL QS +E+ ++ Sbjct: 415 FKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAE 474 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKLV 407 ++ + P +L GH+ + SIG A+ + L + AD MY+AK + Sbjct: 475 KISAALDEPVELS-GHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFC 532 >UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VEL8_DESVV Length = 926 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 9/213 (4%) Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 V + + R++ + A D +L ++E+ + Q A+L R A HD LTGL Sbjct: 447 RVDGEQRWGRQI----VTAVRDVAGDVAFVLAQVEDITEQ-QQTEARLTRMAFHDALTGL 501 Query: 258 ANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAE 315 NR F + T + + +T A+LFLD D FK +ND+ GH GD +L + A+RL Sbjct: 502 PNRVLFLDRVETALRRARRHETYHFAVLFLDLDRFKVVNDSLGHKAGDELLRQFARRLEP 561 Query: 316 FGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGY 375 R GGDEFA++L D+ E I L PF L G + SIG Sbjct: 562 CLREVDTMARFGGDEFAILLDDMSDVDESVNIIERLQAALRQPF-LVQGMEVYTGASIGA 620 Query: 376 AM-TIEHASAEKLQELADHNMYQAKHQRAEKLV 407 + ++ AE + AD MY+AK + V Sbjct: 621 VLRARDYTQAEDILRDADIAMYRAKDSGKGRFV 653 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 4/185 (2%) Query: 224 FNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSAL 282 FN + R +A+ A + A HD LT L NR F+ + ++++ K A+ Sbjct: 272 FNGTYGVARDITERKKAEQA-ITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAI 330 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +FLD D FK++NDT GH GD +L ++A RL + R+GGDEF M+L+++ Sbjct: 331 MFLDLDRFKWVNDTLGHLYGDELLKQVAARLRNCMREQDTLARMGGDEFTMLLHELNQPD 390 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQ 401 + I + PF L + + ++ SIG A+ +H + E L + AD MY K + Sbjct: 391 DATVIAQKIFDELKRPFMLDD-REIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWR 449 Query: 402 RAEKL 406 Sbjct: 450 GKNGF 454 >UniRef50_A3Y4T8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Marinomonas sp. MED121 RepID=A3Y4T8_9GAMM Length = 834 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 6/264 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + L + + + + G IL+ SG I R +H + +K I ++V ++ Sbjct: 298 ILLKNQLKTEIQTLRLEVIYFAGFILIFSG--IIFVRQIHKHIKTPIKTIITRFNEVEAD 355 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 + F++ + +R E++ FN + ++E LQA+ +L A HD LTGLANR Sbjct: 356 Q-FNQVIQLKRNDEWNTIEKAFNKMSKRLDETYQELQAERIKLNHLAHHDVLTGLANRLQ 414 Query: 263 FRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 I +N + K LLFLD D FK +ND GHA GD++L +IAKRL E Sbjct: 415 IYQDIEHCINKAKQDKGKFGLLFLDVDQFKNVNDNLGHAMGDQLLKQIAKRLRETVASDG 474 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 RLGGDEF ++ D +Q L I N PF+L N SIG + +H Sbjct: 475 IVARLGGDEFMIIYPDEDHLGTLQDRAEELNDILNQPFEL-NMTSVLAGSSIGVCLYPQH 533 Query: 382 ASA-EKLQELADHNMYQAKHQRAE 404 E L AD MY +K + Sbjct: 534 GDTLETLVSNADVAMYHSKRKGPN 557 >UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=3 Tax=Alteromonadales RepID=B4S2A8_ALTMD Length = 866 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 12/234 (5%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 L R + + + A++ + R N RV +ER AE +R ++E +E +L Sbjct: 379 LLRFVSHHIAVAIERKRNTESMQRYNVELEERV-KERTAELNRTNKFLKQQIEERKEIEL 437 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA--RKTSALLFLDGDNFKYIN 294 + L+ A HD LT L NRA F S + + + A+LF+D D FK IN Sbjct: 438 K-------LIHDAHHDSLTDLPNRAMFTSRLELAIASKQRYSENMFAVLFIDLDRFKVIN 490 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GD LIE+A+R+A RLGGDEF ++L + + E +V+++ S + Sbjct: 491 DTLGHHAGDEFLIEVARRIALCIRGHDLLARLGGDEFVVLLDNFEDEDDVEEVASRIISS 550 Query: 355 FNLPFDLHNGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 + PF L +G + S+G A + + SA+++ AD MYQAK + V Sbjct: 551 ISEPF-LLDGREMYSGASVGIAHIETYYRSADEVLRDADAAMYQAKTLGRGRFV 603 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 4/183 (2%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFL 285 ++ + + + + +LL A +D LTGL NRA ++ ++ S KT LLF+ Sbjct: 141 MVGSIGDITEQ-KEYQDKLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKTSVGLLFV 199 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D DNFK INDT GH GD L EI+ RL RLGGDEF ++L D+ S +V+ Sbjct: 200 DLDNFKKINDTLGHEVGDLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDLDSPKQVE 259 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 ++C + P + NG++ + + SIG + + L AD MYQAK Q + Sbjct: 260 EVCERILATAMQPVTI-NGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQAKAQGKD 318 Query: 405 KLV 407 Sbjct: 319 TFC 321 >UniRef50_Q8YXJ4 All1219 protein n=4 Tax=Nostocaceae RepID=Q8YXJ4_ANASP Length = 737 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 3/189 (1%) Query: 220 FALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK- 278 + E+ L+ K L A HD LTGL NR F + +N + Sbjct: 540 MEEELKRTAAELFRSNNELKLKEDHLRYLAYHDALTGLPNRKYFAEQLYESINWAKDNNL 599 Query: 279 TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 + LLF+D D FK +ND+ GH GDR+L+ IA+RL+ RLGGDEF ++L + Sbjct: 600 SLGLLFIDLDGFKQVNDSLGHEMGDRLLVVIAQRLSNSLRASDTVARLGGDEFTVILQAI 659 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQ 397 + ++ + P L NG +++SIG ++ E + + L + AD MY+ Sbjct: 660 PNVQVAAKVAEKILANITEPIVL-NGCTAKVSVSIGISIYPETSLDPDTLLKKADAAMYR 718 Query: 398 AKHQRAEKL 406 AKH + Sbjct: 719 AKHLGKNRF 727 >UniRef50_Q2LY94 Sensory box ggdef family protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY94_SYNAS Length = 354 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 3/174 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + + A HD LTGL NR F + + + RKT A++ LD D FK IND Sbjct: 165 ERKRIEDAIRHLAYHDVLTGLPNRILFTDRLVLAIAQAKRYRKTMAVMMLDLDRFKTIND 224 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L + +RL RLGGDEF ++L +++ ++ + F Sbjct: 225 TAGHHIGDLLLQSVGRRLTHTLREEDTVARLGGDEFMILLPEIKQALSSFRVADKIVSAF 284 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 PF + G++ + + SIG A+ + + L + AD MYQAK R Sbjct: 285 KEPF-ICEGNELSTSASIGIAVYPDDGEDMDTLMKHADTAMYQAKSTGRNTYCR 337 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 5/204 (2%) Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 R+ A R A D L+ M + QL A+HD LTGL NR Sbjct: 1001 ETRIWNFSSAPLGRLA-DNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLD 1059 Query: 266 GINTLMNNSDARKT--SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 I + + + ALLF+D D FK +ND+ GH GD++L IA +L Sbjct: 1060 RIEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTV 1119 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-A 382 R GGDEF ++L ++ S +E ++ +T F L G +++SIG + Sbjct: 1120 ARFGGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQ-GQDFFISVSIGITFPSSYEE 1178 Query: 383 SAEKLQELADHNMYQAKHQRAEKL 406 SA +L AD MY+AK + + Sbjct: 1179 SASELLRNADIAMYRAKEKGRARY 1202 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTW 297 +A +L R A +D LT L NR F + N+ RK A+ F+D D FK +NDT Sbjct: 302 KATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTL 361 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH+ GD +L +A+RL R+GGDEF ++L D+ V ++ + + Sbjct: 362 GHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVARVARKVLEELQK 421 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + GH + SIG A+ ++ E L + AD MY+AK Sbjct: 422 SISIK-GHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRG 468 >UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VE11_DESVV Length = 997 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 8/210 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 R +R RV+ R+A+ H L + L ++ QL A HDPLTGL N Sbjct: 511 REDRELWLRVNARRVADAHDATLFYEGFLTDITISH----RSRQQLAHQAYHDPLTGLPN 566 Query: 260 RAAFRSGINTLMNNSDARK--TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 R F + M + R +L+LD D FK IND+ GH GD +L E+A L Sbjct: 567 RLLFLDHLQLAMQRAARRADAMFTVLYLDLDRFKIINDSLGHGIGDALLREVACTLRRCV 626 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 R GGDEFA++L D + + +I + + P ++ GH+ T SIG + Sbjct: 627 RDVDTVARFGGDEFAILLEDTGNCAGAVRIARRIRESLAQPVNIA-GHEVFTTASIGIVL 685 Query: 378 -TIEHASAEKLQELADHNMYQAKHQRAEKL 406 T ++ + E + AD MY+AK + Sbjct: 686 QTRDYLTPEDILRDADTAMYRAKEMGKSRF 715 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLF 284 +L+ + + R + + A HDPLTGLANR F I + ++ ++ AL+F Sbjct: 670 ALIGSLLDITER-KEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMF 728 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D FK IND+ GH+ GD L E+A+RL R GGDEF ++L E E+ Sbjct: 729 LDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEI 788 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRA 403 + I + + P+D+ N H+ MT SIG A + A L + AD +Y+AK Sbjct: 789 ELIAHKILKSLAWPYDI-NDHEVFMTCSIGIASYPKDGREAITLVKNADTALYRAKDLGR 847 Query: 404 EKL 406 Sbjct: 848 NNF 850 >UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=2 Tax=Idiomarina RepID=Q5QZ80_IDILO Length = 866 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 4/204 (1%) Query: 207 RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSG 266 +R +EE +E+ R + + L A HD LTGL NR F Sbjct: 398 KRSAEEIQRVNQFLEKKVAERTEELVSEIERRKKTESSLFHAAHHDNLTGLPNRILFNER 457 Query: 267 INTLMNNSDAR--KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 + + + A+LF+D D FK INDT GH+ GD L+E++KR+ + Sbjct: 458 LQQAVAHKRRHPEHHFAVLFVDLDRFKNINDTLGHSAGDEFLLEVSKRIGDCVRDNDMVA 517 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS- 383 RLGGDEF ++L + S + + + + Q + PF L NG + SIG A +E Sbjct: 518 RLGGDEFVILLDTITSIDDAKDVAKRMIQQMSEPFHL-NGQEHYSGASIGIAECLEETDS 576 Query: 384 AEKLQELADHNMYQAKHQRAEKLV 407 AE+L AD MYQAK + V Sbjct: 577 AERLLRDADAAMYQAKGMGRGRYV 600 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + ++ + F ++ ++ E + L A D LTGL NR F+ +N Sbjct: 1045 LEINQVIDIKGETSHFVAVFTDITER----KKAEQDLRFLASFDTLTGLPNRTLFQDRLN 1100 Query: 269 TLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 + + A ALLFLD D FK+IND+ GH GD +L AKRL RLG Sbjct: 1101 HAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLG 1160 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEK 386 GDEF ++L V I + + F PF L + T++ SIG ++ A A+ Sbjct: 1161 GDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLED-KSLTISTSIGISLYPNDADNADS 1219 Query: 387 LQELADHNMYQAKHQRAEKL 406 L + AD MY AK Sbjct: 1220 LIKFADTAMYHAKSLGRNNF 1239 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + + ++L A HDPLT L R F + M ++ K A+ F+D DNFK IND Sbjct: 321 QRKQMESKLEYMAFHDPLTNLPRRDVFLERLKVAMADARRNGKKLAVFFVDLDNFKIIND 380 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH TGDR+L +IAK L + R+GGDEF ++L DV S + ++ + ++F Sbjct: 381 SLGHHTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILLPDVNSIEDTDKVAKRILELF 440 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 + P L+N ++ +T+SIG A+ +H +E + + AD MY AK + Sbjct: 441 DQPIKLNN-YELPVTISIGIAIYPDHGKSERAILKNADIAMYTAKRKGKNGF 491 >UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 14/231 (6%) Query: 189 LKNITDVVHD-VRSNRNFSRRVSEERIAEFHRFALDFNS--------LLDEMEEWQLRLQ 239 L+ ++ ++ D + + + R + +++ + + ++ + L+ ++E+ R + Sbjct: 506 LERVSQLIEDKISTYQTQKRYIHKDKRIVWVQLSVSISRDQDRTPKYLIAQIEDITER-K 564 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWG 298 ++ + + A HDPLT L NR S ++ + ++ + AL+FLD D+FK IND+ G Sbjct: 565 YQHEEAEQFAYHDPLTNLPNRRMLLSRLHHALMQTERFYRAMALMFLDLDHFKNINDSLG 624 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD +L E+A RL + R GGDEF +VL ++ + + + + F P Sbjct: 625 HDVGDMLLKEVANRLLKCVRSIDTVSRHGGDEFVIVLSEISHTEDAELVAQKIIASFKEP 684 Query: 359 FDLHNGHQTTMTLSIGYAMTIEH--ASAEKLQELADHNMYQAKHQRAEKLV 407 L NGH+ M+ SIG A++ A++L + AD MY+AK + Sbjct: 685 I-LINGHEIMMSTSIGIAVSKHEKPTKADELMKHADKAMYEAKGAGRNRYC 734 >UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V50_RHOFD Length = 678 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 8/210 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S + + +S +++ + + ++ ++ E +A ++ A D LT L N Sbjct: 464 KSGKLYVEWLSIKQVRDEQGVPSHYVAVFSDISER----KASEVRMQHLAHFDVLTNLPN 519 Query: 260 RAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG- 317 RA F + + + KT AL+F+D D FK +ND GH GD +L E+A+RL + Sbjct: 520 RALFSDRLRQAIAKARRDKTQLALMFMDLDRFKPVNDQLGHQVGDLLLQEVARRLLDCVR 579 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 R+GGDEF ++L D+++ + + NL F++ H+ ++ SIG A+ Sbjct: 580 RESDTVARIGGDEFVVMLPDLETVQAATLVAEKILAALNLVFEIGE-HRIHISSSIGIAI 638 Query: 378 TIEHASAEK-LQELADHNMYQAKHQRAEKL 406 EH E L + AD MY AK ++ Sbjct: 639 FPEHGQDENHLLKSADAAMYLAKENGRNRV 668 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 10/232 (4%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHR-----FALDFNSLLDEMEEW 234 H HN ++E L+ + + F + SE+ E H D + + + Sbjct: 366 HFHN-VIEPLRTAISEGKEFKRECLFLKPNSEQTWVELHARPQISTNGDITGFIATILDS 424 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYIN 294 R +A +L A HDPLTGLANRA F+ + ++ + + ALL LD D FK +N Sbjct: 425 TFRHEA-EDKLRELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGSLALLCLDLDGFKNVN 483 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH +GD +LIE+AKRL + R+GGDEF ++L ++ ++ + Sbjct: 484 DTLGHDSGDELLIEVAKRLTKCVREEDTVARVGGDEFMILLEGLKDAQIAAEVSEKILNS 543 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA--SAEKLQELADHNMYQAKHQRAE 404 P + N + ++ SIG + ++ L + AD +Y+AKH+ Sbjct: 544 LEPPCSI-NRQEVFISTSIGITFATKGDKNDSKSLMKQADMALYRAKHEGRN 594 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 3/179 (1%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGD 288 ++E + +L+R A +D LTGL NR + + + + AL+ LD D Sbjct: 472 SVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLD 531 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 +FK +NDT GHA GD +L E A RL + RLGGDEF ++L D+ S + + Sbjct: 532 DFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVA 591 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + N PFD+ GH+ + SIG A+ + L AD MY++K + Sbjct: 592 EKILAACNQPFDVG-GHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVF 649 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 8/214 (3%) Query: 201 SNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL-----RLQAKNAQLLRTALHDPLT 255 ++RR S E E+ A N + ++ + + +L A +D LT Sbjct: 482 EGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLT 541 Query: 256 GLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 L NR F + T + S + ALLF+D D FK++NDT GH GD++L E+A RL Sbjct: 542 DLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLG 601 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 RLGGDEF ++L ++ V ++ + + + + H+ ++ SIG Sbjct: 602 HCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGMIDKLEERYCIQD-HELFISASIG 660 Query: 375 YAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLV 407 + E A L + AD MY+AK Sbjct: 661 ITIYPEDADNMMDLVKNADVAMYRAKENGRGSFC 694 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 + Q+ A HD LT L NR F + + ++ + A+LF+D D FK IND Sbjct: 142 ERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNIND 201 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD++LI +A R RLGGDEF ++L +++S + ++ + Sbjct: 202 TLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAA 261 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAE 404 P D+H G + +T SIG + E A E+ L + AD MY+AK + Sbjct: 262 IQPLDVH-GQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKN 310 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 7/215 (3%) Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDP 253 +V + R+S + A F +++++ + + ++ R A +D Sbjct: 335 EVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITDR----KRAEEKIRRLAYYDS 390 Query: 254 LTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGL NR ++ + ++ ALLFLD D FK +ND+ GH GDR+L E+A R Sbjct: 391 LTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAAR 450 Query: 313 LAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLS 372 L+ RLGGDEF ++ V++ ++ + + PF L + + S Sbjct: 451 LSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTL-DRQTLHIATS 509 Query: 373 IGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 IG + + + E L + AD MY AK + Sbjct: 510 IGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSY 544 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 2/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 +++ AQL + A +DPLTGL NR +S ++ + + +L++D D FK +ND Sbjct: 348 QIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVND 407 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +LI++A+R+ + RLGGDEF +VL DV+ + + +L + Sbjct: 408 SLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLL 467 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 PF L +GH+ + SIG ++ E AS A +L + +D MYQAK + Sbjct: 468 TSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTY 519 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 + + R A +D LT L NR FR + + + ++ AL+ +D D+FK +ND Sbjct: 553 ERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFALMLIDLDHFKEVND 612 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L++ A+R+ R+GGDEF ++L DV +++I + Sbjct: 613 TMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDPDNIERIAQNIITKL 672 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L ++ SIG + A + E L + AD MY AKH ++ Sbjct: 673 AAPFVLGEEK-AFISASIGITLYPSDADSMETLLKNADQAMYVAKHLGRNRM 723 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S F + ++ + I + +F L ++ + + QL + A +DPLT L N Sbjct: 793 KSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQ----KETEEQLEKLAYYDPLTELPN 848 Query: 260 RAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 RA FR + M ++ K+ L F+D D FKY+ND+ GH GD +LI++A R+ Sbjct: 849 RALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLR 908 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF ++L ++ ++V +I A+ + F L GH+ + SIG AM Sbjct: 909 TSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQ-GHEVFIGGSIGIAMH 967 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + E L + AD MY+AK + Sbjct: 968 PDDGEDYETLTKHADTAMYRAKEEGRGTY 996 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 5/215 (2%) Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDP 253 V + R R R E A F + N + + + +R + +L + HD Sbjct: 281 KQVFETRHQRKDGRIFPVEVSASQCLFNNEENH-VAFVRDITIR-KKYEKELEHQSNHDA 338 Query: 254 LTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGLANR I + +++ ++ +A+ LD D FK IND+ GH+ GD VL+ +A+R Sbjct: 339 LTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAER 398 Query: 313 LAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLS 372 L+ RLGGDEFA+V+ V ++ + + + F PF L N + +T S Sbjct: 399 LSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGN-RELRITTS 457 Query: 373 IGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 IG ++ +E L AD MYQAK Q Sbjct: 458 IGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGF 492 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 + + + A HD LTGL NRA + + + + + A+LFLD D FK +ND+ Sbjct: 279 RKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDRFKVVNDS 338 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH+ GD++L ++A+RL RLGGDEF ++L + V+++ Sbjct: 339 LGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPAIPDRPAVERVAQKCIDALE 398 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF +HN H+ + +SIG A+ EH + E L + AD MY K Sbjct: 399 QPFMVHN-HRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEHGKGHY 448 >UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8B2_KANKD Length = 427 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + Q+ A +D LT L NR+ F + + + + ALLFLD D FK +ND Sbjct: 253 ERKFIEQQVEHQAHYDTLTDLPNRSLFSDRLEQAIRLAHRQHEQLALLFLDLDKFKPVND 312 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 +GHA GD +L ++A+R+ + R+GGDEF ++L V+S I L Q Sbjct: 313 NYGHAIGDILLQQVAQRMKDCLRESDTVGRIGGDEFLVLLPHVESVDSATHIAEKLLQAI 372 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + PF + N ++ SIG A+ H + +L ++AD MY+AK+Q+ Sbjct: 373 SSPFRI-NRIDIEISCSIGIALYPTHGNTVLELIQVADQAMYKAKNQKGN 421 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDN 289 +++ + + + ++L A +D LTGL NR ++ ++ ++ A+ A+LFLD D+ Sbjct: 687 LKQDVTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNVAVLFLDLDD 746 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH+ GD +LI+ A RL RLGGDEF ++L ++ EV+ I S Sbjct: 747 FKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINEPIEVEIIAS 806 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 L + F PF L N + T+SIG A+ + ++L AD MY +K + Sbjct: 807 KLLEQFYQPFRLEN-RELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKDRGRNTY 863 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 3/173 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIN 294 L+ Q K + A HD LT L NR F +N + ++ + A++F+D D FK IN Sbjct: 437 LQRQDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLIN 496 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH+ GD +L E+A RL + R GGDEF ++L ++S ++ + Sbjct: 497 DTLGHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDA 556 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 F + H+ +T SIG A+ E AE L + AD +Y++K Q Sbjct: 557 LKAAFVIRR-HELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTC 608 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 3/173 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYIN 294 ++ Q K + A HD LT L NRA F +N ++N+ + + ++LFLD D FK IN Sbjct: 435 IQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIN 494 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH+ GD++L +A RL R GGDEF ++L + ++V + + Sbjct: 495 DTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSA 554 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 PF L N H+ +T SIG A+ + E L + AD +YQAK Sbjct: 555 LEQPFHLEN-HELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTY 606 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 4/169 (2%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYINDT 296 + QL+ A HDPLTGL NR + + + R ++FLD DNFK +NDT Sbjct: 450 RRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDT 509 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L +A RL RLGGDE+ +VL +V+ +V + + +F Sbjct: 510 LGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFA 569 Query: 357 LPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAE 404 P L G++ +T SIG A+ + + + L + AD MY AK Q Sbjct: 570 APLLLM-GNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 25/287 (8%) Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 H G + + S + S+ + ++ A+ ++ ++ +V LK + Sbjct: 273 LHEGLLLIGILPKEELLEESQRLGNSVGWIVLGTIVLLIFALLIS--MNVLMVRPLKQLM 330 Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDP 253 V ++ N + ++ E + L F + +E+ ++R++ R A HD Sbjct: 331 GAVREIGR-GNLAPTIALSTSDELGKLGLSFQEMAGNLEKSRVRVE-------RLAYHDS 382 Query: 254 LTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGL NR + +++ + + A+LFLD DNFK +NDT GH GD++L+E+A R Sbjct: 383 LTGLPNRFRAHETLRCMISLAHRESRRMAVLFLDLDNFKRVNDTLGHQVGDQLLMEMAIR 442 Query: 313 LAEFGGLR------------HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 L RLGGDEF ++L +V S + ++ S + I LPF Sbjct: 443 LQVVLRAEDVIHQEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFY 502 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 N ++ SIG ++ + L + AD MYQAK Q Sbjct: 503 F-NENEIYSGCSIGISLFPSDGSDVDDLIKRADAAMYQAKSQGRNNF 548 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGDNFKYIND 295 + +L+ A HD LTGL NR F + L + K A+++LD D FK IND Sbjct: 422 ERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIIND 481 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH TGD +L E+A RL RLGGDEF +++ ++ + ++ + + +F Sbjct: 482 TLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVF 541 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + PF L H+ +T S+G + AEKL + AD MY AK + Sbjct: 542 SAPFRLEK-HEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTY 592 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDT 296 + ++ + A +D LTGL NR+ + + + + + A++FLD D FK INDT Sbjct: 471 RKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDT 530 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L +A+RL E R+GGDEF +++ ++ ++ +I + + Sbjct: 531 LGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAIS 590 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P L N + +T SIG A+ E + L + AD MY+AK Q Sbjct: 591 KPLVL-NDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAF 640 Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 32/94 (34%) Query: 156 IWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIA 215 + + + + + + + L L L IT V + ++ ER Sbjct: 271 LKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLITRHVEAIPDKSGLHNLINLERKD 330 Query: 216 EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 E FNS++ +++ Q L+ + A Sbjct: 331 ELGTLINAFNSMILSLDQHQNALRESESNFRALA 364 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTW 297 + A+L+ A HDPLTGL NRA F + + + + A+LF+D DNFK++ND+ Sbjct: 647 KNLEARLVHLAFHDPLTGLPNRALFMDRLEHALARAGRSGDVLAVLFIDLDNFKFVNDSL 706 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GDR+L +A+RL+ RLGGDEF ++L + E ++ + ++ Sbjct: 707 GHEAGDRLLALVARRLSGATRPGDTVARLGGDEFTVLLEGIADGGEAARVAGRVAEVLRE 766 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKL 406 PF + G + ++ S+G +++ S E+L AD MY+AK + ++ Sbjct: 767 PFRVA-GRELFVSASVGISVSTAGSGSVEELMRGADLAMYEAKREGKDRY 815 >UniRef50_Q2BKH4 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKH4_9GAMM Length = 1083 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 79/312 (25%), Positives = 121/312 (38%), Gaps = 37/312 (11%) Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 + Q IR E ++ + +L ++ I++A IA LT+ + L+ Sbjct: 507 ERVEQKIRFEAEQGRTAIISNLRETAERLSISTLLMILVVIVIAVWIASYLTKRIT-TLI 565 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL- 245 + ++ R +R +E A D + L E+E + + QL Sbjct: 566 KGIRAFRSGQRQFRFA-LVNRDEMGALASELDEMADDIDGYLGELEAEVKQRKRTEFQLL 624 Query: 246 -------------------------------LRTALHDPLTGLANRAAFRSGINTLMNNS 274 A HD LTGLANR F+ + ++ + Sbjct: 625 KVQDGLEERVAERTSELEVQVEERTRAEKQVRHLAEHDALTGLANRRGFQQELECILRKA 684 Query: 275 DAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAM 333 D K ALL D D FK +NDT GHA GD +L +A L RLGGDEFA+ Sbjct: 685 DTNGKKVALLLFDLDRFKEVNDTLGHAIGDDLLCSVADLLRANIRDEDIVARLGGDEFAI 744 Query: 334 VLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELAD 392 V+ ++ S V + + + P L GH S+G + + E+L AD Sbjct: 745 VMSNLASVDGVINTALRIIETLSKPLQLS-GHTIRTGTSVGITVYPDDSGDPEQLMLHAD 803 Query: 393 HNMYQAKHQRAE 404 MYQAK + + Sbjct: 804 LAMYQAKDKGGQ 815 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDT 296 + + + + A HDP+TGL NR + +N ++ + A+LFLD D FK IND+ Sbjct: 516 RKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDS 575 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GD++L + RL + RLGGDEF +++ + ++ V + + + Sbjct: 576 LGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLC 635 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+ + + H+ + SIG ++ AE+L + AD MYQAK Sbjct: 636 EPYQIDD-HEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTC 685 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 7/207 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 + F +S I F + ++++++ E + ++ A +D LT L N Sbjct: 382 KHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEH----KQAEERIHYLAYYDSLTALPN 437 Query: 260 RAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R F +N + ++ ++ A+ F+D D FK +NDT GH+TGDR+L IA RL Sbjct: 438 RELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIR 497 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF ++L ++ + + + + P + + H ++ SIG A+ Sbjct: 498 EEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDD-HDLCISASIGIALY 556 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAE 404 +AE L + AD MY +K + Sbjct: 557 PGDGTTAEALLKNADSAMYISKESGRD 583 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 3/169 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 + +L A HD LTGL NRA F + + + R A+LFLD D FK INDT Sbjct: 397 RKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVINDT 456 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L + KRL R GGDEF ++L ++ + + + Sbjct: 457 LGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDVLA 516 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF + GH+ ++ SIG ++ + L AD MY+AK Sbjct: 517 EPFSVQ-GHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKN 564 >UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV29_DESOH Length = 458 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYIND 295 R + ++ + A HD LTGL NR F + + + + A + LD DNFK +ND Sbjct: 280 RRKQTEEEIQKMAYHDALTGLPNRKLFSDRLGIALAQARRDQKGIAAIILDLDNFKDVND 339 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GH GDR+L A+RL+ RLGGDEF ++L D++ +V ++ + F Sbjct: 340 TFGHDVGDRLLQAAAERLSAALRKSDTVARLGGDEFVLILPDLKGTEDVDRVAQKIVDGF 399 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKL 406 PF + + HQ +T SIG A+ +E L + AD MYQ K Sbjct: 400 RNPFSI-DTHQLIVTTSIGIAVYPRDGISEVLLLKHADIAMYQVKQAGRNGY 450 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 + AQ+ A +D LTGL NR F + + + L+FLD D FK +ND+ Sbjct: 208 RKRSEAQVTHLAHYDQLTGLPNRVLFLDRFKQDIKKAQRTGQIVTLMFLDLDKFKEVNDS 267 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L ++A+RL R+GGDEF ++L D+ S+ +++I + Sbjct: 268 LGHDIGDMLLKDVARRLENCVRDSDTVARMGGDEFTIILNDINSQVNIERIAQDILNQLT 327 Query: 357 LPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 +PF L + ++ SIG + + E L + AD MY AK Q + Sbjct: 328 MPFHLGD-EVIHVSTSIGISNYPKDDTEVELLLKNADQAMYVAKEQGRNRY 377 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 7/220 (3%) Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEF---HRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 +++++ + + ++ R H F+ D + L+ + E + Q+ Sbjct: 243 LSELLRLLEQGTSIQFELTLPRTDNLYSVHAFSPD-HGLVATLFEDITERRKSEQQIQHM 301 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A D LT L NR F + + ++ + A+LFLD D FK INDT GH+ GD++LI Sbjct: 302 AYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFKDINDTLGHSAGDQLLI 361 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 ++ +RL RLGGDEF +++ D+ + ++ L PF L G + Sbjct: 362 QVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLINAIQPPF-LIAGREL 420 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +T SIG A+ + +AE L + AD MY +K + Sbjct: 421 HVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRY 460 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 +L+ QL + A +DPLT L NR + + + R + A+ FLD D+FK IND Sbjct: 366 QLKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNIND 425 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD++L A RL E R+GGDEF M+L D+ S I + Sbjct: 426 SLGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGAL 485 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P + G +++ S+G ++ + +AE L AD MY AK Q Sbjct: 486 RKP-TILEGRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRNTF 536 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDT 296 + ++L+ A +D LTGL NR+ + ++ ++ ++ T A+LFLD D FK++ND Sbjct: 238 RKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANRGNVTLAVLFLDLDRFKHVNDA 297 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GH GD +L E+++RL + R+GGDEF ++L ++ S+ I + + + Sbjct: 298 FGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIILTNLIKCSQAGSIAAKIISSMS 357 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 F L GH+ SIG A+ + L + AD MYQAK Sbjct: 358 RLFQLG-GHELYSGTSIGIALYPTDGNDVDTLLKHADMAMYQAKASGRGTF 407 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 4/179 (2%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA--RKTSALLFL 285 +D + + QL A HD LT L NR F + + A+LFL Sbjct: 688 IDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFL 747 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK IND+ GHA GD +L EIA+RL + RLGGDEF ++L ++ + Sbjct: 748 DLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARLGGDEFTILLEEIHDVKDAI 807 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRA 403 +I + + PF+L G + SIG A++ E+ +A ++ AD MY+AK Sbjct: 808 KIAERIHKDLTRPFNL-EGQEIFTNTSIGIALSNGEYEAASEILRDADTAMYRAKAGGK 865 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 138/322 (42%), Gaps = 27/322 (8%) Query: 94 VRDKQQNILA--SWHYTRKDPGDTFSNFISHWLF------PAPIIQPIRHNGETIG-EVR 144 + D ++A S K G+ + + + + + I G + Sbjct: 202 ILDPTGKVVAHPSEKLAEKPKGNHYDEILKNSSGEISFKDNGNLKKAIFLTNAKTGWRII 261 Query: 145 LTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRN 204 I+ + V +L A + L + + + L+ + D V S + Sbjct: 262 AEIDQLKIAQSVKPIFNVTLFVLLFAICLTSILISVIVRSITKPLQVLVDASVKV-SEGD 320 Query: 205 FSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFR 264 S V + EF + +N ++D + ++ A +DPLT L NR F Sbjct: 321 LSGHVIIKSQDEFQKLGDAYNHMIDSLSKF--------------AFYDPLTNLPNRRQFV 366 Query: 265 SGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 + + + + ++ +++F+D DNFK +NDT GH+ GD +L ++A++L G Sbjct: 367 FTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSAGDELLQKVAEQLQSSIGSEGVV 426 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHA 382 RLGGDEF ++L + ++++ S+L F PF +H G T + +S+G A + Sbjct: 427 ARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTIH-GQITFVQMSLGIASYPIDGV 485 Query: 383 SAEKLQELADHNMYQAKHQRAE 404 + E+L + AD MY+AK Sbjct: 486 TQEELLKHADIAMYKAKESGGN 507 >UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3D1_GEOSF Length = 934 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 4/180 (2%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGD 288 E+ R + + + + A HD LTGL NR F + + + A++FLD D Sbjct: 476 EVVRNISRRKQMESAIEQMAFHDALTGLPNRRLFNERLAQAIAYAQRNDQFLAVMFLDLD 535 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 +FK IND+ GH GD +L E+A RL G R GGDEF + L +++ + + + Sbjct: 536 HFKDINDSLGHTIGDELLKEVATRLKRCGRRAEDTIARQGGDEFLLFLSEIKDKEDAVHL 595 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + L Q PF L G++ +++SIG ++ E L AD MY+AK Q + Sbjct: 596 AALLLQEMTAPFILS-GYELFVSVSIGISIYPHDGRDVETLASNADIAMYRAKQQGRNSV 654 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 16/221 (7%) Query: 197 HDVRSNRNFSRRVSEERIAEFHRFA---------LDFNSLLDEMEEWQLRLQAKNAQLLR 247 H V +++R E E+ + ++ ++ ++ E + QL R Sbjct: 84 HGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEH----KRNVEQLTR 139 Query: 248 TALHDPLTGLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 AL+D LT + NR + +++ + ++ ALLFLD D FK INDT GH GD +L Sbjct: 140 LALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLL 199 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 E A+RL + R GGDEF ++L +++ E + + + PF N + Sbjct: 200 KETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPF-CFNHQE 258 Query: 367 TTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 ++ SIG ++ + E L +AD MYQAK + Sbjct: 259 IYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQY 299 >UniRef50_A1K4W6 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K4W6_AZOSB Length = 578 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 4/226 (1%) Query: 183 NGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKN 242 + L+ + + + R + R E A F + ++ + L Sbjct: 345 RAVTRPLQRMLAAIRQF-PDEAAVRALPLARTDEIGVLARSFRDMQAQIRAYLDDLHDSR 403 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHAT 301 A+L R A HD LTGLANR F + + ++ AL+++D D FK +ND GHAT Sbjct: 404 AELARQASHDALTGLANRRHFEERLEQALARCRRNGQSLALIYIDLDGFKQVNDRHGHAT 463 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD++L +A+RL + RLGGDEF ++ V S V I L + +P ++ Sbjct: 464 GDKLLQAVARRLQQAVREIDTVARLGGDEFVILFDQVSSHESVVLIAEKLLLMLRMPVEI 523 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + SIG +M + A A L AD MY+AK + Sbjct: 524 -DALTLPVRASIGISMYPDDAPDAHALLNHADCAMYRAKTHGRDSY 568 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 4/174 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS--ALLFLDGDNFKYIN 294 + K A+L R A +DPLT L NR F + + ++ + R+ A+ FLD D FK +N Sbjct: 268 ERKQKEAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVN 327 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD L IA+RL+ RLGGDEFA++L ++ + V +I L ++ Sbjct: 328 DSLGHLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELSNPDIVHRIAERLQRV 387 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 + PF L H+ T SIG A+ + E + AD MYQAK Q + + Sbjct: 388 LSAPFTLKQ-HELFTTASIGIALGTSYYEQPEAILRDADIAMYQAKTQGKARHI 440 >UniRef50_A0K1H4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrobacter sp. FB24 RepID=A0K1H4_ARTS2 Length = 732 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 15/263 (5%) Query: 147 ARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFS 206 A + + F+ + + L ++A G + R + L+ + ++ V +++ N++ Sbjct: 197 AHSAELERFLVVARSFL---FVVAVGATVYFRRRMVKDLMRPVGSLHQGVRKLQA-GNYN 252 Query: 207 RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSG 266 R+ R E A FN + + + + L A HDPLTGLANRAA Sbjct: 253 HRIEVFRRDELGELAEAFNGMAAAV-------HSSHETLTHRATHDPLTGLANRAALMER 305 Query: 267 INTL--MNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 + ++ + LLF+D D+FK +ND+ GH GD +LI++A RL Sbjct: 306 LTASFGAGSTRRNRNEGLLFIDIDDFKEVNDSLGHERGDALLIQLAARLKGCVRSDDVVA 365 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA-MTIEHAS 383 RLGGDEFA+V+ D + S I + + PF + + T+T S+G A E Sbjct: 366 RLGGDEFAIVVMDDDAGSVTAWIADRIHRALRAPFFVGDDR-LTVTASMGAAQRRPETTD 424 Query: 384 AEKLQELADHNMYQAKHQRAEKL 406 A +L AD MY AKH + Sbjct: 425 AAELLRQADFAMYLAKHGGKARF 447 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 93/403 (23%), Positives = 163/403 (40%), Gaps = 23/403 (5%) Query: 17 ALRNISMTSIFITMMLIWLLLSVTSVLT------LKQYAQKNLALTAATMTYSLEAAVVF 70 +L ++F+ +++ L S+ +L + L + A Sbjct: 9 SLAFKQARTVFLVSVVLGLCFSLYHILADLHQEQRRIEEHYQFKLLQNY--SNASQAAYH 66 Query: 71 ADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII 130 + A + + L ++ D ++L H T P Sbjct: 67 LNHLLAEQVASTLMMDNAIYRVKIVDDFGDVLTQKHREIDSQSLTTQLLSKILTPAQPFY 126 Query: 131 QPIRHN---GETIGEVRLTARDSSISH-FIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 + H +GE+ + SSI+ FI S ++ + + L + L Sbjct: 127 KTELHQPNANAIVGELSFSVDGSSIADAFIKKSTRIVLFDLFRNILLTSILLFFFYFKLS 186 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + + + + V+ +++ +N E R AL F++L WQ R A +QL Sbjct: 187 KPIITLINWVNSLQNRKNALELPPGNNNDELGRLALSFHNL------WQARA-AAESQLN 239 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLF-LDGDNFKYINDTWGHATGDRV 305 + A D LTGLANR+ +N + S + + +LF LD D FK IND+ GH GD + Sbjct: 240 QLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPGVLFYLDLDRFKTINDSLGHTIGDNL 299 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 + IAKRL + A R+GGDEFA+++ + E + L + + P+ + + H Sbjct: 300 MRTIAKRLEAWLQPGEIAARIGGDEFAILIPKLNKEDAANK-AKQLLTLISNPYSIDD-H 357 Query: 366 QTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 Q T+SIG + + S+ + AD +Y+AK K + Sbjct: 358 QLYCTVSIGISTFADKGISSIDVLRQADTALYRAKVAGRNKYM 400 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 7/207 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 ++ F S I F ++ +++ E +A+ L A +D LTGL N Sbjct: 860 KNGELFWEAASISPIKNAEGIITHFVAVKEDITER----KAQQTTLTYQANYDALTGLPN 915 Query: 260 RAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R + + +D +K A++F+D D+FK +NDT GH GD +L ++++RL + Sbjct: 916 RFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLR 975 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF ++L +++ + I S + PF+L + ++ SIG + Sbjct: 976 KSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLT-EEAFISASIGITLY 1034 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAE 404 + L AD MY K Sbjct: 1035 PDDGNDVSVLMRNADAAMYLGKRGGRN 1061 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 62/168 (36%), Positives = 86/168 (51%), Gaps = 4/168 (2%) Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWGH 299 ++L ALHD +TGLANR + + R A+LFLD D FK IND+ GH Sbjct: 388 QEKILHDALHDAMTGLANRVLLIDRLTQAIARRQRRPNSLFAVLFLDVDRFKVINDSLGH 447 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD++LI I +RL RLGGDEFA++L D+ ++ ++ + + PF Sbjct: 448 LAGDQLLIGIGQRLRACTRPEDTIARLGGDEFAILLEDLSDPAQAMKVAERILMVLGRPF 507 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L GH+ T SIG A E + +AE L AD MY+AK + Sbjct: 508 -LLEGHEIFTTASIGIAFPWEDSQTAEDLLRDADTAMYRAKSLGKARY 554 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 4/200 (2%) Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 V+ E I + A + + +++A+ +LR A +D LT L NR F+ + Sbjct: 359 VAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQR-HILRLAHYDVLTDLPNRVLFQDRLE 417 Query: 269 TLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 + ++ + +ALLFLD D FK +NDT GH GD +L E+A RL + RLG Sbjct: 418 RAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLG 477 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEK 386 GDEF ++L ++ + ++ + + + P + +G + SIG ++ + S ++ Sbjct: 478 GDEFTVILDEISAANDASMVADKILASLHAPIFI-DGRDVFIGTSIGISLFPIDGTSGDE 536 Query: 387 LQELADHNMYQAKHQRAEKL 406 L + AD MYQAK + Sbjct: 537 LLKHADTAMYQAKAAGKGRF 556 >UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V87_PSEA6 Length = 1524 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 4/187 (2%) Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTS 280 D +S L + + +A+ A L++ A D LTGL NRA ++ + + T Sbjct: 1072 TDIDSYLIILSDISEHKKAQQA-LIKLANFDALTGLPNRALLLDRVDHAIYQAQRSASTL 1130 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 L F+D D FK +ND+ GH GD +L EI+ RL RLGGDEF +++ +V + Sbjct: 1131 GLFFIDLDKFKQVNDSLGHNAGDTLLQEISARLLNLLRKEDTIARLGGDEFVVLIENVHT 1190 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 ++ + S + +I + P L N H +++ SIG A+ + A A++L + AD MY AK Sbjct: 1191 IDDLTHLASQIIEIIDTPVQLEN-HLVSVSSSIGIALYPDDAQDAQELLQNADIAMYHAK 1249 Query: 400 HQRAEKL 406 Sbjct: 1250 ENGRSHF 1256 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 16/194 (8%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFL 285 L +++ R + Q+ A +D LTGL NR F + + ++ + A+LFL Sbjct: 245 LTGTIQDITER-KRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLFL 303 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH------------KAYRLGGDEFAM 333 D D FK +NDT GH GDR+L ++A RL RLGGDEF + Sbjct: 304 DLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFTI 363 Query: 334 VLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELAD 392 +L D++ +V +I + + ++P+ L G + ++ SIG ++ A +A L AD Sbjct: 364 MLSDIEHFQDVAKIARRILEAVSVPYSL-EGQEVFVSTSIGISLYPFDATTASDLIRNAD 422 Query: 393 HNMYQAKHQRAEKL 406 MYQAK Q Sbjct: 423 GAMYQAKEQGRNGY 436 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 99/224 (44%), Gaps = 8/224 (3%) Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 +VEA +I D+ + R + I L S D EE R K Sbjct: 107 IVEADSSIDDLSRIIIDAGM--RHMVSGFIVTEDGLYLGIGSGHDLFEEVANR---KQNH 161 Query: 245 LLRTALHDPLTGLANRAAFRSGINTL-MNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 L A +DPLT L NR + + ALLF+D D FK +NDT GHA GD Sbjct: 162 LYHLAHYDPLTSLPNRLLLNDRLKRACLRGQRGGYRIALLFIDLDRFKLVNDTLGHAAGD 221 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 ++L +A R A RLGGDEF ++L VQ E + + L Q PF + N Sbjct: 222 QLLQGVAGRFAACVRKVDTVARLGGDEFTVLLEPVQGPDEALAVAAKLAQSLERPFLIQN 281 Query: 364 GHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKL 406 H+ T + SIG + EH A+ E L AD MY AK + + Sbjct: 282 -HEITTSASIGVVLFPEHDATVEGLMRKADAAMYCAKREGRNRF 324 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + ++ A D LT L NR F + + N+ + A++FLD D FK IND Sbjct: 430 ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRIND 489 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD+VL+E A R++ RLGGDEF ++L ++ +V ++ + Sbjct: 490 SLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHV 549 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L + ++ +T SIG A+ E + E L + AD MY+AK Sbjct: 550 KQPF-LVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSY 600 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 10/223 (4%) Query: 186 VEALKNITDVVHDVR--SNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 +E+++ + + ++R + + +S E + ++ ++ E + Sbjct: 362 MESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSI-HIVRDVTES----KKMED 416 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATG 302 ++ A HD LTGLANR F + ++ + A++FLD D FK IND+ GHA G Sbjct: 417 EIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAG 476 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D++L I+ RL E R+GGDE+ +++ + + I + + N PF + Sbjct: 477 DKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAI- 535 Query: 363 NGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAE 404 +GHQ +T+SIG ++ + AE L + AD +Y AK Q Sbjct: 536 DGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN 578 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Query: 208 RVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI 267 R ++ RIAE+ D + + + R A DPLTGLANR+ + + Sbjct: 571 RDTDGRIAEYVTLFSDITE-----------RKQQEVAMWRQANFDPLTGLANRSLLQDRL 619 Query: 268 NTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRL 326 + + ++ LLFLD D FK+IND+ GH GD +L+++A+RL RL Sbjct: 620 DRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARL 679 Query: 327 GGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAE 385 GGDEF +V++D+ +++ I L + PF L G + ++ S+G + + + Sbjct: 680 GGDEFTVVVHDLADRADLGAIADKLVAVLREPFALR-GARHHISGSVGITVFPDDGDDVQ 738 Query: 386 KLQELADHNMYQAKHQRAEK 405 L AD MY+AK + Sbjct: 739 TLLRNADIAMYKAKQAGKNR 758 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 3/180 (1%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGD 288 ++E+ L + QL A HD LT L NR F + +N + ALLF+D D Sbjct: 147 DLEKNLKILDEQREQLEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLD 206 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 +FK IND+ GH GD+VLIE+++R+ RLGGDEF ++L D+ ++ I Sbjct: 207 HFKEINDSLGHGVGDKVLIEVSRRMKNQMRKSDTLSRLGGDEFCIILNDIIDIEDMSDII 266 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 ++ + P ++ NGH + +SIG ++ SA L + AD MY+AK Sbjct: 267 TSGMEALKEPMEI-NGHTLYVGMSIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRNTYC 325 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 12/227 (5%) Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFH-----RFALDFNSLLDEMEEWQLRLQAK 241 + K + + +++R F V+ + + + LD Q +LQ + Sbjct: 398 KPEKTVHHFIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLD----IQEQLQQQ 453 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHA 300 L A HDPLT L NR F + ++ + ALLF+D D FK IND++GHA Sbjct: 454 KNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHA 513 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 +GD VLIE KRL + RLGGDEF +++ ++++ + + + + + + P Sbjct: 514 SGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIF 573 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + N + +T SIG ++ A +L + AD MYQAK Sbjct: 574 V-NENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTY 619 >UniRef50_Q3A6T5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6T5_PELCD Length = 717 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 3/174 (1%) Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYI 293 + R A++ + + A +DPLT L NR + ++ + + + A+LF+D D FK + Sbjct: 243 RQRHTAQDRHIQQLAYYDPLTELPNRVLLQERLDQSLAEALRSHHPLAVLFVDLDRFKQV 302 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND+ GHA GD++L + +RL + RLGGDEF +VL + S + +I + Sbjct: 303 NDSLGHAIGDQLLKMVGQRLQQCLRSNDTVARLGGDEFIIVLSGFRHPSSLPKILDKIFD 362 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQ-ELADHNMYQAKHQRAEKL 406 + P+ + H+ +T SIG A+ + +A L AD MY AK +R Sbjct: 363 ALSKPYRI-EMHRIVVTASIGVAVCPDDGTAADLLMRNADIAMYVAKEERGNSY 415 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 4/182 (2%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSALLFL 285 +D ++ + +L A HD LT L NR+ F + + + R+ A+LFL Sbjct: 774 IDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLGHALQRNLRRRDLRFAVLFL 833 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK IND+ GH+ GD +L IA RL + RLGGDEF M++ ++ +V Sbjct: 834 DLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPEDTLARLGGDEFTMLIENITCPEDVI 893 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAE 404 + + Q PF+L NG + SIG A+ + + + AD MY+AK Sbjct: 894 AVAQRIHQELQKPFNL-NGQEIFTNTSIGIALNHPHYGHPQDVLRDADTAMYRAKAAGKG 952 Query: 405 KL 406 + Sbjct: 953 RY 954 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 11/207 (5%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 R++ + RV +ER E + +D LL E+ E ++ ++ ALHD LTGL N Sbjct: 463 RAHEDLELRV-KERTKELAKANMD---LLVEINERKM----AEERVKHMALHDALTGLPN 514 Query: 260 RAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R + ++++ + + A+LF+D D FK +NDT GH GD++L+E+A RL + G Sbjct: 515 RLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIG 574 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF +VL ++ +E+ + + Q F L +T SIG A+ Sbjct: 575 ANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLA-LQDMFVTPSIGVAIY 633 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAE 404 E + +L + AD MY AK Sbjct: 634 PEDGETPVQLMKNADAAMYHAKASGRN 660 >UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LW67_ACIC1 Length = 884 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 6/232 (2%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAE--FHRFALDFNSLLD--EMEEWQ 235 + N +V L+ T + + S F A + L+ +E+ Sbjct: 367 RVRNAIVAPLRGETRPIGMLMVGDRPGEGASFGGQDVRLFEALANHVSVALENGRLEQSL 426 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIN 294 +L+ +L + A HDPLTGLANRA F ++ ++ + A +T A+LF+D D+FK +N Sbjct: 427 AQLRELEQKLTQLAFHDPLTGLANRALFSERLSQVLAKAKAEGRTCAVLFIDLDDFKTVN 486 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GD +L +A+R+ + RLGGDEFA+++ D S ++I + +T+ Sbjct: 487 DTLGHDAGDELLCAVAERITGCLRPSDQPARLGGDEFAVIIEDALSTQAAERIAARITEQ 546 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKL 406 P +H G + + SIG A + +A++L AD MY AK + Sbjct: 547 LRAPISVH-GCELHIRASIGIATSQGVQTADELLRNADLAMYMAKADGKGRY 597 >UniRef50_A0KMH1 PAS:GGDEF domain protein n=2 Tax=Aeromonas RepID=A0KMH1_AERHH Length = 809 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 6/172 (3%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDT 296 A+ + R A +DPLT L NR + + M ++ ALLF+D D+FK INDT Sbjct: 501 ERAAREEMMRRLAFYDPLTNLPNRRLLQQRLKEAM---ESEAQLALLFIDLDHFKPINDT 557 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GH TGD +L +A+R+ R RLGGDEF ++L D E + L Q Sbjct: 558 FGHETGDVLLNMVAERMRHCVRERDLVARLGGDEFVILLPDTGDE--ALAVADHLHQSLR 615 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 PF + + ++ SIG A+ EH + L AD MYQAK + ++ Sbjct: 616 HPFRIDEEQELRISSSIGVALYPEHGTDPKTLMHHADQAMYQAKGRGRGRVC 667 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 3/179 (1%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLD 286 + E + + L+ + ++L A HD LT L NR+ F I + + AL+ LD Sbjct: 307 ISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLD 366 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK +ND+ GH GD +L IA RL E RLGGDEF +VL + +V Sbjct: 367 IDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIF 426 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + + L + P D+ GH + T+SIG ++ E ++L + AD MY+AK Sbjct: 427 VANKLLATLSRPLDIS-GHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKN 484 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 ++ K QL A HD LTGL NR F + + + + R+ AL+F+D D FK INDT Sbjct: 456 IKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKIINDT 515 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L +A+RL E RLGGDEF + L ++ + + L + Sbjct: 516 MGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLIETIR 575 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 P + GH+ + SIG A+ A A+ L AD MY+AK Sbjct: 576 QPVHIG-GHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRNTF 625 >UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2Q6_9PROT Length = 564 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 9/237 (3%) Query: 175 ITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 I R + +++ ++ R +++ V+ + F + ++ E Sbjct: 326 IQFYRKMWRAIIDQGHWQGEIWDKRRDGGLYAKSVNIIALRHQDGSIYRFVAQFSDITE- 384 Query: 235 QLRLQAKNAQLLR-TALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKY 292 + + +L+ A +DPLT L NR F+ +N + + + AL F+D D FK Sbjct: 385 ----KKQKDELIHWQANYDPLTNLPNRRLFQDRLNQAIKLAHRTELPLALFFIDLDYFKE 440 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 INDT GHA GD +L+E+A+R++ RLGGDEF ++L ++ +++ ++ + Sbjct: 441 INDTLGHANGDVLLMEVARRISSCVREADTVARLGGDEFTVILPELSDATQILRVAKNIV 500 Query: 353 QIFNLPFDLHNGHQ-TTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + PF N ++ SIG A + A + L + AD MY AK + + V Sbjct: 501 DKLSQPFFFVNDETGYHVSASIGIANYPQDAMDTKGLIKCADKAMYAAKSEGRNRFV 557 >UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P569_9PROT Length = 751 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 L+ QL A +D LTG+ NR + + +S T A+ +LD D FK +NDT Sbjct: 309 LKQHERQLEHIAHYDALTGIPNRVLLADRLQQALAHSKREGTILAVCYLDLDGFKLVNDT 368 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD+VLIE+ +R+ + RLGGDEFA++L + + E + L + + Sbjct: 369 MGHEAGDKVLIEVTQRIKKSIRGDDTVARLGGDEFAVLLLGLHAPEECSASLNRLLEEIS 428 Query: 357 LPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 P ++ N ++ SIG ++ + A+ L AD MY AK + Sbjct: 429 QPIEIKN-RLFEVSASIGVSIYPGDDHDADTLLRHADQAMYTAKQSGKNRY 478 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 8/213 (3%) Query: 201 SNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL-----RLQAKNAQLLRTALHDPLT 255 ++RR + E AE+ +N + + L + + + R A D LT Sbjct: 391 QGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIWRQANFDQLT 450 Query: 256 GLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 GL NR +N + +D + A+LFLD D FK +NDT+GH GD++L E A RL Sbjct: 451 GLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLL 510 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 RLGGDEF ++L +Q + VQ I ++ + F+ PF L N T +++SIG Sbjct: 511 HSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDND-LTHVSVSIG 569 Query: 375 YAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 + E +A E L + AD MY AK+ + Sbjct: 570 ITIYPEDGNAGEVLFKNADQAMYVAKNNGRNRY 602 >UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8Y9_9GAMM Length = 684 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 93/399 (23%), Positives = 168/399 (42%), Gaps = 25/399 (6%) Query: 24 TSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV---VFADGPAATETL 80 T I +++L + + + L L+ Q+ ++ + S + A + P A + + Sbjct: 16 TIIIASLILSLVFGVLQAFLDLESEKQQIHNRFSSILLLSHDPAAQAAYQLNSPLAKQVI 75 Query: 81 AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRH----N 136 L AE+ D + LAS + + F+ F++++LF I Sbjct: 76 KGLLSHPDIIQAEIMDDFDSQLAS-DVDQPSDENEFTQFLANYLFSKQGHLSIPLIFSPK 134 Query: 137 GETIGEVRLTARDSSIS-HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDV 195 +G + +T +++ FI + V ++ +++ L + L L +T Sbjct: 135 NINVGSLSITLDSQAVAKSFIGRATNVFLLSLIKNLILSLILLAFFYKVLTHPLTKLTIW 194 Query: 196 VHDVRSNRNFSRRVSEE-RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 + ++ N + + EF F +L E E + AQL A D L Sbjct: 195 ISSIKYNNKAIDNPPIKIKKDEFGLLIKQFMALWKERE-------SAEAQLREYAYFDLL 247 Query: 255 TGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 TGL+NR ++ + + T AL ++D D FK+IND+ GHA GD +L+ I KRL Sbjct: 248 TGLSNRRHLSDILHNAIIKIQHQPTIGALFYMDLDRFKHINDSLGHAVGDALLVTIGKRL 307 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESE-----VQQICSALTQIFNLPFDLHNGHQTT 368 +EF RLGGDEF +++ D+ E Q+ + + P L GH Sbjct: 308 SEFKNDDTSVARLGGDEFVILIPDIADTEEKAHEAATQLANKILTSIAEPHTLI-GHLLY 366 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + SIG ++ + + + + + AD +Y+AK + Sbjct: 367 TSASIGISIIRQDSNTGQDVLRHADIALYKAKAEGGNTY 405 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 L+ +L + A +D LT L NR F I + + + K +ALLF+D D FK +ND Sbjct: 578 ELKEAEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDRFKQVND 637 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 GH TGD++L+E A+R++ L RLGGDEF ++L ++ VQ I + + Sbjct: 638 NHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIARRIQKSL 697 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF L + + + SIG AM + +AE L + AD MY K + Sbjct: 698 RDPFRLDD-KEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKERGRN 746 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 4/170 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 +++ ++ A +DPLTGL NR +N ++ +D T ALLF+D D+FK +ND Sbjct: 1027 KVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVND 1086 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD++LIE+ +R+ + R GGDEF +VL D E+ + + + Sbjct: 1087 TLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPD-TGENGAVHVAEKILESI 1145 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + +L ++ +T SIG A+ + A+ L + AD MYQAK+ Sbjct: 1146 SDQLNLKP-YKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRN 1194 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 91/402 (22%), Positives = 151/402 (37%), Gaps = 26/402 (6%) Query: 12 PTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFA 71 + R L I + S+ ++++ SV L A T +L + Sbjct: 9 KSIGRKLLLIVLPSLLFGTVVMFSAFEHYSVRDRLSALNSRLDSFAITQGAALVKPLWEF 68 Query: 72 DGPAATETLAALGQQGQFSTAEVRDKQQNILASWHY-TRKDPGDTFSNFISHWLFPAPII 130 D A + + A V I+AS D F + P+I Sbjct: 69 DFAAVQRQFQSYPDVPELFEATVFGIGGEIVASAQGGDTDGRRDVFRKVV-------PLI 121 Query: 131 QPIRHNGETIGEVRLTARDSSISHFIW----FSLAVLTGCILLASGIAITLTRHLHNGLV 186 Q +G + + D + + + VL+G LL + + + RHL + Sbjct: 122 QQTPGGEYPVGRLEVAFHDGKVRSELVRQRAGAAIVLSGAFLLVTAVLLAAVRHL---VT 178 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 L + + +H S V R E +N LL E+++ + Sbjct: 179 GPLTRLRNSLHHNASVLMREPLVWSSR-DELGEVVHAYNQLLTEIDQRT-------EDIH 230 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRV 305 + A D LTGL NR I + + ++ ALLF D DNFK +NDT GH GD + Sbjct: 231 QLANRDLLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDAL 290 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L IA R+ + R GGDEF +V+ + S E + L + +P L + + Sbjct: 291 LRIIADRIHDIMRGMDTVARWGGDEFVIVVESLNSAGEAASVAEKLIETIGVPVQLGS-N 349 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +S+G +M + L + AD +++AK + Sbjct: 350 LLRVGVSVGISMYPQDGADITTLIKNADMALFEAKGRGRNTF 391 >UniRef50_B1XXC7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXC7_LEPCP Length = 755 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 9/229 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 LH AL + H S VS A + + D E QL L+ Sbjct: 528 LHQRKRLALPQRVRLAHAEGSEHVVQESVSPMF-AAGGQLIGAVAVMHDVTEAHQLALK- 585 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGH 299 L A HD LTGL NR ++ + + +T AL+F D D FK +ND+ GH Sbjct: 586 ----LAHRAQHDVLTGLPNRLLLHDRLHQGLQLARRNRTVLALMFFDLDRFKAVNDSHGH 641 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 ATGD +L ++A RL + A RLGGDEF ++L V+ S+ + + L + P+ Sbjct: 642 ATGDELLCQVADRLLKQLRATDTACRLGGDEFVVLLSQVEQASDAGDVATHLLEALCKPY 701 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKLV 407 L HQ ++ SIG A + + E L AD MYQAK Q ++V Sbjct: 702 QLGK-HQADISASIGIACFPQDGTDEATLMRNADAAMYQAKQQGRNRVV 749 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 107/250 (42%), Gaps = 17/250 (6%) Query: 174 AITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV-SEERIAEFHRFALDFNSLLDEME 232 + + E + + + N + + E R L ++E Sbjct: 271 TVQFEERMLRPDGEPVYQLRNYTPLFDENGELLLYLGHGVDVTELRRTQEALRELNAQLE 330 Query: 233 EW----QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD--ARKTSALLFLD 286 E L+A + QL ALHD LTGL NRA F ++ + S A+LFLD Sbjct: 331 ERVEARTAELEALSRQLQHDALHDSLTGLPNRALFSDRLSQAIARSKLPGGPQYAVLFLD 390 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK INDT GH TGD +L+E+A+RL RLGGDEF ++L +QS + Q Sbjct: 391 VDRFKGINDTLGHPTGDAMLVEMARRLRACLRATDTVARLGGDEFTILLEPLQSTEQAAQ 450 Query: 347 ICSALTQIFNLPFDLHNG---------HQTTMTLSIGYAMT-IEHASAEKLQELADHNMY 396 + + + P + HQ TM+ S+G + ++ SA + AD MY Sbjct: 451 VAARIQDALRRPMQMPAAGPGGLPGGWHQVTMSASLGIVHSQPDYDSAMAVLRDADIAMY 510 Query: 397 QAKHQRAEKL 406 +AK K Sbjct: 511 RAKDGGRAKY 520 >UniRef50_Q1N132 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N132_9GAMM Length = 664 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 201 SNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANR 260 S + R+S + E ++++ + + R +A +L + A HD LTGLANR Sbjct: 456 SQKIIPVRLSISHVGELE------STIVVIITDISDR-KALENRLQQMAHHDALTGLANR 508 Query: 261 AAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGL 319 F + +N ++ +D K ALLF+D D FK IND +GH GD++L +A+RL Sbjct: 509 TLFENQLNQAISRADRQNKKVALLFIDLDRFKPINDEYGHEMGDKLLRIVAERLESRTRE 568 Query: 320 RHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI 379 R+GGDEF M++ D+ + ++ + + + P + +G + ++ SIG ++ Sbjct: 569 HDTVARIGGDEFVMIIEDISDMNSIESVAQQVVSLLCSPIVI-DGIEISVGCSIGISLYP 627 Query: 380 EHASAE-KLQELADHNMYQAKHQRAEKL 406 +H ++ +L AD MY AK Q ++ Sbjct: 628 DHGTSSIELTRSADIAMYAAKSQSEKRF 655 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 4/192 (2%) Query: 217 FHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA 276 RF+ N LL + + R + +L A HDPLT L NR + ++ + ++ Sbjct: 503 LARFSDGQNRLLVVVRDITER-KNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAER 561 Query: 277 -RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVL 335 + AL+FLD D FK +ND+ GHA GDR+L ++A RL + RLGGDEF +VL Sbjct: 562 EGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVL 621 Query: 336 YDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHN 394 V+ V ++ + + P + G + T TLS+G AM E + L + AD Sbjct: 622 NAVRDADGVVEVAEKIHKSVAPPITI-EGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAA 680 Query: 395 MYQAKHQRAEKL 406 MY AK Sbjct: 681 MYHAKESGRSTY 692 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KT 279 + + + R + A + A HD LTGLANR + + + + + + Sbjct: 357 TREITHFIAIFSDITAR-KRAEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQR 415 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 A++FLD D FK+IND+ GH GD +L ++A+RL + RLGGDEF +VL + Sbjct: 416 LAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIG 475 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQA 398 +V + + L + P+ + + + T SIG ++ + A L AD MY A Sbjct: 476 GAHDVTHVAAKLLAQLSAPYCV-DTTELHTTASIGISLFPDDSADPAALMRNADTAMYHA 534 Query: 399 KHQRAEKL 406 K K Sbjct: 535 KAAGRAKF 542 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + + +L A HDPLT L NR + + + + K AL+FLD D FK+IND Sbjct: 395 QRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFIND 454 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GHA GD++L +A RL RLGGDEF +VL D++ V Q L Sbjct: 455 TLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRV 514 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQE-LADHNMYQAKHQRAEKL 406 L +GH +T S+G A+ + S ++ AD MY+AK + Sbjct: 515 QGMVTL-DGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNF 565 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 10/249 (4%) Query: 166 CILLASGIAITLTRHLHNGLVEALKNITDVVHD-VRSNRNFSRRVSEERIAEFHRFALDF 224 C+LL +H L ++ + + +R R S + A Sbjct: 349 CVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQV 408 Query: 225 -----NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-K 278 +L + R + + +LL A HD LTGL NR+ +N + + R + Sbjct: 409 PHGDDQALCLMFHDITDRRRFQE-ELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQ 467 Query: 279 TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 ALL D DNFK +NDT GH GD++L +A R+ F RLGGDEF +VL ++ Sbjct: 468 MVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNL 527 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQ 397 + + + + +PF L G + +T S+G ++ + E L + AD MY Sbjct: 528 TRMDDAVTVAESFRNLLAMPFFLG-GREIFITASMGISLFPDDGDTMEALIKKADTAMYH 586 Query: 398 AKHQRAEKL 406 K Sbjct: 587 IKESGRNSF 595 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 + + ++ A +D LTGL NR + + N+ ALLF+D D FK +ND Sbjct: 267 QRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVND 326 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD++L +A+R+ R+GGDEF ++L +++ ++ + L Sbjct: 327 SLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSRIETATDAARSAEKLITSI 386 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + P+ + H+ +T SIG ++ ++ A L AD MY AK Q + Sbjct: 387 SQPYQIEE-HELLLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNRY 437 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 ++ +L A HD LT L NR F ++ + ++ KT A+++LD DNFKYIND Sbjct: 468 EIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYIND 527 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD++L +I++RL RLGGDEF +++ +++ ++ +C + + Sbjct: 528 SLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQL 587 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 LP L G T+ +S+G + + A E L + AD MY+AK Sbjct: 588 ELPHALS-GRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGY 638 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 12/280 (4%) Query: 135 HNGETIGEVRLTARDSS-ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 + G + L S ++++ + + L+ + +++GL +K + Sbjct: 946 FGNTSEGVLILDVEGSIRVANYAAQQIIGIDSTDLVGQSFTQFV--QMNDGLASEIKQLL 1003 Query: 194 DVVHDVRSNRNFSRRVSEE-----RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 R + ++ + + R + A L R Sbjct: 1004 SDSQSWTGERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDITER-KQTEADLRRL 1062 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A +D LTGL NR+ F S + + + + ALLFLD D FK++ND++GH+ GD +L+ Sbjct: 1063 ANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLV 1122 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E + RL H R GGDEF ++L + S ++ I L + PF L+ G + Sbjct: 1123 EASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQIVAPFKLY-GREF 1181 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 ++ SIG ++ + A E + AD MY AK + Sbjct: 1182 YISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGNF 1221 >UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47U99_COLP3 Length = 1534 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTW 297 ++ ++L A +D LTGL NR I ++ S+ R TS A+ F+D D FK +ND+ Sbjct: 1091 KSAESELRLLANYDHLTGLPNRTLLLERIKHAIDFSNRRDTSIAVFFIDLDRFKQVNDSL 1150 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L EI RL + R+GGDEF ++L +E+++ +I + Sbjct: 1151 GHDFGDLLLREITNRLQSTLRIDDTVARIGGDEFVVLLESFANENQLGRIAEKVIDTIGQ 1210 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 DL +G+ ++ S+G A+ ++++L AD MY AK Sbjct: 1211 SVDL-DGNLVSVGASVGIALYPNDGINSDELLRHADVAMYHAKQAGKSNF 1259 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 87/441 (19%), Positives = 158/441 (35%), Gaps = 64/441 (14%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQ-----------KNLA-----LTA 57 R +S I + ++ L S+L ++ A+ +L L + Sbjct: 4 LSRYFSTVSFILIVLAAGVLGPLYQRLSLLQMQNLAESRNIAMAQVFQNSLHTQLESLIS 63 Query: 58 ATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS 117 + + + V D T+ L + +V ++ + + S TR+ Sbjct: 64 DAVGRDIHSGQVTDDILQLQATVHDLMRDTSVIKVKVYNRLGSTIFS-TDTRQIGDSQLQ 122 Query: 118 NFISHWLFPAPIIQPIRHNGETI---GEVR---------------------------LTA 147 N + + H G++ +T Sbjct: 123 NPGFRAAISGLVTSELIHRNTIDAFEGQLVEVDVLSSYIPILGKEHAVEGAFELYQNVTP 182 Query: 148 RDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSR 207 + ++ +W+ A + + + R + D +++ R+ Sbjct: 183 FVTQLNRNLWWVTAAVVLVFAALYLMQFLVVRRAQGI-------LEDQEGRIKAARDTLE 235 Query: 208 RVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI 267 R E R + E + ++L A HDPLTGLANR F + Sbjct: 236 IQVAARTEELKRTNSQLEGEISE-------RRQAQSKLNYLAYHDPLTGLANRRCFIERL 288 Query: 268 NTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRL 326 ++ + A+L++D D FK +ND+ GH GD +L+ +A RL+E L RL Sbjct: 289 EESLSEGERHGEKLAVLYIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLIDMLARL 348 Query: 327 GGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-E 385 GGDEF ++ +SE EV+ + + F PF L + H+ +T S+G ++ ++ Sbjct: 349 GGDEFICLMEAARSEDEVELLAREIIAAFEYPFKLGD-HELFLTASVGISLCPSDGNSVL 407 Query: 386 KLQELADHNMYQAKHQRAEKL 406 L AD MY+AK Sbjct: 408 DLMRNADTAMYRAKMLGRGNF 428 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 ++ Q+ + A +DPLT L NR ++ + ++ R+ A++F+D D+FK +ND Sbjct: 393 HIRENERQIRQLAYYDPLTRLPNRRLLDDRLSLAIKHAHRHRQRLAVMFIDLDHFKQVND 452 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GHA GD +L+ +++RL E RLGGDEF +L D+Q E ++ L + Sbjct: 453 TLGHAVGDELLLRVSERLREHLREDDTLARLGGDEFLALLPDLQEVDEAIRVTQRLIEAI 512 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + P+ + + H + SIG ++ + S + L AD MY++K + Sbjct: 513 SQPYTIGD-HDFRVGCSIGLSLYPDDGESPDALIRNADGAMYRSKTEGRNTY 563 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S +F V+ + + F +L ++ E + + A++ A +D LT L N Sbjct: 155 KSGEHFPCWVNISVLQDGQGEISHFVALFTDISER----KEQEARVQHMAEYDALTDLPN 210 Query: 260 RAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R ++ + ++ A+LF+D D+FK INDT GH GD +L E+A+RLA Sbjct: 211 RVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVR 270 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF ++L + E QI + + PF + H + SIG ++ Sbjct: 271 GLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGE-HSLVVGCSIGISLM 329 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L AD MY AK Sbjct: 330 PDDGSDIQTLLMNADLAMYHAKAHGRNTF 358 >UniRef50_Q3A5N0 Sensory box/GGDEF family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5N0_PELCD Length = 808 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDT 296 + Q+ + A +D LTGL NR + ++ + + + ALL+LD D FK INDT Sbjct: 594 RKKAQEQVRQLAFYDALTGLPNRTLLANRLDQSLAQAQRDGRMLALLYLDLDRFKEINDT 653 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 +GHA GD VL A+RL RLGGDEF ++L +++ + + + ++ Sbjct: 654 YGHAAGDMVLQAAAQRLNSCIRRNDTVARLGGDEFVVLLPGLENVDQPTTVAEKILKVMK 713 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 +PF + + Q +T SIG + EH L + AD MY AK + Sbjct: 714 VPFQVES-QQLNVTPSIGMVLYPEHGQELGVLLKRADIAMYAAKSRGRNGY 763 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 22/140 (15%) Query: 151 SISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVS 210 S+S + A G +LL+ I ++R G+V L+ + + R R ++ Sbjct: 368 SLSRTVLSISAAALGIVLLSLVIGFYVSR----GIVRPLERAIALFERIGKGR-LDRHLN 422 Query: 211 EERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTL 270 + E + A F+ ++D +++ N +++ R S + Sbjct: 423 MTQGDEIGQLARAFDRMIDNLKDVTASRNELNREIIE------------RTRAESELRAT 470 Query: 271 MNNSDA-----RKTSALLFL 285 ++ A+ FL Sbjct: 471 SAQRQELESIVNQSPAVAFL 490 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 L+A ++ A HD LT LANR + + + + AL+ +D D FK IND Sbjct: 461 ELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIND 520 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L+++AKRL+ RLGGDEF + L + S ++ + +T+ Sbjct: 521 TLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREI 580 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 + P+ L G + + SIG + S L + AD MY AK Sbjct: 581 SAPY-LIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRG 629 >UniRef50_B3E6U2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E6U2_GEOLS Length = 768 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 2/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 L+ AQ+ A +D LT L NRA F I+ + ++ + AL F+D D FK IND Sbjct: 435 ELKQIEAQIQHLASYDNLTSLPNRALFSDRIDRALLSAQRNSSKLALFFIDLDQFKPIND 494 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 GH TGD +L A+R+AE R+GGDEFA++L ++ + + + + + Sbjct: 495 ELGHDTGDWLLQAAAQRMAESVRESDTVARIGGDEFAVLLQNIATAQDARTVAEKIRTTL 554 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 N PF +G ++ SIG A+ E + L AD MY+AK + Sbjct: 555 NRPFITPSGVTLHISCSIGVALYPEDGDNQRDLLRAADEAMYRAKKRGRN 604 >UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1C1_9PROT Length = 581 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 3/170 (1%) Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGH 299 + + A HD LTGL NR FR N + + K A++++D D FK +NDT GH Sbjct: 413 EQETVAHHAQHDFLTGLPNRLLFRDRFNQQLALAKRYSKKFAVMYIDLDRFKPVNDTLGH 472 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD +L+ +A RL R GGDEFA+++ +V ++ +V + + PF Sbjct: 473 QVGDLLLMAVADRLKSQVREIDTVSRFGGDEFAILVSEVVTQRDVTALAEKILAALKAPF 532 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 L N H ++ S+G A+ + E + AD MY+AKH+ A R Sbjct: 533 VLEN-HTVNISGSLGIAIYPDDGMDMETILSNADTAMYKAKHKGANTYCR 581 >UniRef50_A5UVR9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Roseiflexus RepID=A5UVR9_ROSS1 Length = 921 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 89/172 (51%), Gaps = 3/172 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 + QL ALHD LTGL NR F ++ + + K A+LFLD D FK IND+ Sbjct: 480 RKQAEEQLAYGALHDALTGLPNRTLFMDRLSLALKRAQREKHLFAVLFLDLDRFKTINDS 539 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GD +LI +A+RL RLGGDEFA++L + + E + I + Q Sbjct: 540 LGHAAGDELLIAVARRLESVLRPGDTVARLGGDEFAVMLDRLNAPEEAEWIVERIHQALQ 599 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 P + GH T SIG A+ E + E+L AD MYQAK QR + V Sbjct: 600 APLSVR-GHTVYTTASIGLALGNEGYERPEELARDADTAMYQAKMQRRARHV 650 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 3/171 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTW 297 + A+L A +D LT L NR FR + ++ ++ ALLF+D D FK INDT Sbjct: 476 KQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERHGNMLALLFIDLDGFKPINDTL 535 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GHA GD +L +A+RL RLGGDEFA++L +++S E I + Sbjct: 536 GHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDELRSPEEAGIIARNILDTLER 595 Query: 358 PFDLHNGHQT-TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+ L Q ++ SIG + AE L AD MY+AK + + Sbjct: 596 PYILAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAMYRAKQEGKNRY 646 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 3/176 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDN 289 ++E R +A++ L A +D LTGL NR + + ++ + + A++F+D D Sbjct: 580 IKEDITRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDR 639 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH GD +L ++A+RL + RLGGDEF +++ +++ S + I Sbjct: 640 FKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAK 699 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + PF+L + ++ SIG + + L AD MY K Sbjct: 700 KILSSLEKPFNLLE-EEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRN 754 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 +A ++ R A D LTGL NR + + L+ + + A+LF+D D FK +ND Sbjct: 181 ERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVND 240 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH TGD++L +++RL RLGGDEF ++L + V I + L Q Sbjct: 241 TLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSL 300 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 P L + + + SIG ++ + S L + AD MY AK Q Sbjct: 301 CKPVQL-DAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNTY 351 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTW 297 +A+ + R A DPLT L NR F+ ++ + +D AL FLD D FK INDT Sbjct: 805 KAQEELIWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALFFLDLDRFKPINDTM 864 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L + A+R+ RLGGDEF ++L ++Q+ ++ +I + + Sbjct: 865 GHQAGDELLQKCAERINAAVRSSDTVARLGGDEFTVILPNIQNGQDLSRIAEGIIKTLTE 924 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKL 406 PF L G + ++ S+G A+ + + ++ L AD +YQAK + Sbjct: 925 PFYLKAG-EANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGRNNV 973 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDT 296 L+ +L + A +DPLT LANR + + N+ R+ ++LFLD D FK INDT Sbjct: 759 LKHNEEKLHQQAYYDPLTKLANRTLAYDRLQHAITNAKSRRRLVSVLFLDLDKFKNINDT 818 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +LIE+AKR+ RLGGDEF ++L D+ + + + Sbjct: 819 LGHDIGDLLLIEVAKRIQALCSQSDTVCRLGGDEFLVILEDITHYETAISVAKGIIAALS 878 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L G + + SIG + L + AD MY++K Sbjct: 879 QPFYL-EGRTISTSTSIGITYYPNDGDTMKTLLKNADIAMYRSKTNGRGSY 928 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTW 297 + QL A +D LTGL NR F ++ +++ T A++F+D D FK INDT Sbjct: 242 KRTQQQLHFLAHYDTLTGLPNRLLFNESLHQAQTHANRTSDTIAVMFIDLDRFKNINDTL 301 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++L ++ R++ R+GGDEFA+VL +V+ ES+ + + L Sbjct: 302 GHGIGDKLLQQVGNRISLCIRESDTVARMGGDEFAVVLVNVREESDAAVVAEKIIDALRL 361 Query: 358 PFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAEKL 406 PF + H+ + SIG + L E AD MY AK + Sbjct: 362 PFMVGE-HEVFVGASIGITFYRPGQDDRDVLLEKADVAMYHAKERGRNNF 410 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 9/201 (4%) Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 ++ I E S++D E + + A +D LT L NR F Sbjct: 347 DYYITLSPIEENGEIVEMVGSMIDITER-----KKAEETIRYMAHYDSLTNLPNRTLFHE 401 Query: 266 GI-NTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 + ++ + ++F+D D FK INDT GH+ GD +L +A RL Sbjct: 402 KLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVS 461 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-S 383 RLGGDEFA+ L V E +I + + L + + +T SIG +M + Sbjct: 462 RLGGDEFAIFLTGVTHR-EAGEIAQRIITSMSESITL-DHIEIFITPSIGISMYPDDGDD 519 Query: 384 AEKLQELADHNMYQAKHQRAE 404 E L + AD MY AK Q Sbjct: 520 IEALLKHADAAMYLAKEQGKN 540 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 18/287 (6%) Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 + H E + + ++ LTG + A+ + + Sbjct: 476 LTHGIENSASAVVITDTQGVIEYVNKKFIQLTGF---SLEEAVGKNPRILKSEATPPEVF 532 Query: 193 TDVVHDVRSNRNFSRRV-----------SEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 D+ + S R + + S I+ + + + +E+ R + Sbjct: 533 VDLWKTILSGREWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINER-KNA 591 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHA 300 A + A DPLT L NR + + + S + AL++LD D+FK++ND+ GH Sbjct: 592 EATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHP 651 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD +L E+A R + RLGGDEFA++L+D+ + +V I L + P Sbjct: 652 AGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVP 711 Query: 361 LHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 L +G + +T SIG A+ + + L++ AD +Y AK + Sbjct: 712 L-DGREVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTF 757 >UniRef50_C0QBD5 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBD5_DESAH Length = 537 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 3/176 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 + + +R ++ +L R+A +D LT L NRA F N + S ++ ALLF+D D Sbjct: 356 IAKAIIRRKSYLIELYRSANYDKLTDLPNRAMFMDRFNEIFKQSRRYKRKLALLFIDLDG 415 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH GD +LIE+AKRL RLGGDEF ++ + S + + Sbjct: 416 FKSVNDTLGHDAGDELLIEVAKRLKGCVRDSDVVARLGGDEFTVIFSTITSLDDPKLGAQ 475 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + Q PF + GH T ++ SIG ++ +H E L + AD+ MY AK Sbjct: 476 KILQNLAAPFSIK-GHDTRISASIGMSIYPDHGNDIEVLLKKADNAMYLAKEAGKN 530 >UniRef50_B0TJQ1 Diguanylate cyclase/phosphodiesterase with GAF sensor n=20 Tax=Shewanella RepID=B0TJQ1_SHEHH Length = 909 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 10/221 (4%) Query: 190 KNITDVVHDVRSNRNF--SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLR 247 ++I + +S + S + EE++ E + N ++E+ + + QL+ Sbjct: 419 QHIATAIEKKQSEESLKQSYELLEEKVDERTKALASVN---QDLEKEINQRKRIERQLVH 475 Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNFKYINDTWGHATGDRV 305 A HD LTGL NR+ F + + + + A+LF+D D FK +NDT GH GDR Sbjct: 476 DAKHDNLTGLPNRSMFMERLTQAIKHVRRHSLERFAVLFIDMDRFKLLNDTLGHLEGDRF 535 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 LIE AKRL + RLGGDEF ++L + + + + + + + P+ L N Sbjct: 536 LIETAKRLKQCIRNNDMLARLGGDEFVILLDSISGQQDAEDVAERVLAELSKPYQLAN-Q 594 Query: 366 QTTMTLSIGYAMTIE--HASAEKLQELADHNMYQAKHQRAE 404 Q + SIG AM+ + ++E + AD MYQAK Q Sbjct: 595 QFKSSASIGLAMSGQSRSDTSESILRDADTAMYQAKSQGKG 635 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 3/181 (1%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLD 286 + E ++ + LQ + L A HD LT L NR F + + + + K AL F+D Sbjct: 250 ITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFID 309 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK+IND+ GH+ GDRVL AKR+ E RL GDEF +++ D+ + Sbjct: 310 LDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASV 369 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + + + P + + + ++ SIG ++ + A E L + AD MY+AK Sbjct: 370 LAEKILLVLQKPMYI-DEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNT 428 Query: 406 L 406 Sbjct: 429 F 429 >UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C531_9GAMM Length = 725 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 4/184 (2%) Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALL 283 ++ M + L+ Q++ + + A D LTGL NR F + ++ S ++ AL Sbjct: 269 TRMVGSMVDITLKHQSQQM-IWQQANFDHLTGLPNRNMFTERLKQEISESKRYQQKFALF 327 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 F+D D+FK +NDT GH GD++LIE+A+RL R+GGDEF ++ + + Sbjct: 328 FIDLDHFKEVNDTLGHGAGDQLLIEVAERLQLILRESDTIGRIGGDEFTALIPHINQTCD 387 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 + + L Q LPF + +G ++ SIG + +H+ ++L + AD MY++K Sbjct: 388 IDSLAQKLIQTIELPFYI-DGESIFISASIGITLFPDHSEKIDELLKFADQAMYRSKENG 446 Query: 403 AEKL 406 ++ Sbjct: 447 RKRF 450 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 146 TARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNF 205 A ++ ++ L + +A + + L + + AL +NR Sbjct: 160 VADSDQQLSWVTLAICALMAVLFVAQMLVVRLAGRIIDRQAAALSE---------TNREL 210 Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 RV+ A L DE++E + +L A HDPLTGL NR F+ Sbjct: 211 DSRVAARTW----ELANANARLEDEIQER----RRAEERLDHLAHHDPLTGLPNRLLFQK 262 Query: 266 GINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 ++ ++ D A+LF+D D FK +NDT GH GD++L +A RLA+ Sbjct: 263 RLSRALSVPDLPPYKLAMLFIDLDRFKDVNDTLGHYIGDQLLNAVAARLADSIRAEDMLA 322 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHAS 383 RLGGDEF VL +++ + L +F PF + NG+ ++ SIG + + A Sbjct: 323 RLGGDEFICVLESIENRDMAADVAGKLLALFRQPFCI-NGNDLYLSASIGISFAGNDGAD 381 Query: 384 AEKLQELADHNMYQAKHQRAEKL 406 + L AD MY AK+ + Sbjct: 382 VDTLLRHADIAMYSAKNAGRNRC 404 >UniRef50_Q1K038 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K038_DESAC Length = 388 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 99/219 (45%), Gaps = 26/219 (11%) Query: 193 TDVVHDVRSNRNFSRR--VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTAL 250 D V S RN +S E I EFHR ++ + A Sbjct: 185 VDAVPQFFSGRNRPDEVFISIEDITEFHR---------------------AQKKIEQLAY 223 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEI 309 +D LTGL NR F IN + ++ ALLF+D D FK +ND +GH+ GD L E+ Sbjct: 224 YDALTGLPNRRLFMDRINQTVKRAERDNDHLALLFIDLDKFKSVNDRFGHSGGDDYLCEV 283 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 A RL RL GDEF ++L V + ++ + + L + ++ +GH ++ Sbjct: 284 ATRLESAVRKSDTVARLSGDEFVVLLSTVHNGNDGELMAKKLFEQLQPTVEI-DGHDVSI 342 Query: 370 TLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 SIG A + A +AE L + AD MY+AKHQ Sbjct: 343 NASIGIACYPQDATTAEGLLQCADTAMYRAKHQGKNNFC 381 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 2/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 + A + A HD LT L NRA FR ++ + + + A++F+D + FK IND+ Sbjct: 264 RKESEAFINFQAYHDLLTRLPNRALFRDRVDVAIAQAQRQGHPLAVMFIDLNRFKVINDS 323 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GDR+L +A+RL R GGDEF ++L + + + + + N Sbjct: 324 LGHTIGDRLLQAVAQRLLGCIRKGDTLSRFGGDEFTLLLPQISRQEAAVDVAEKILESLN 383 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L H+ + SIG A+ E E L AD MY+ K+ + Sbjct: 384 EPFHLGGDHELYVGASIGIAIYPEGGDTLETLIRHADIAMYREKNTGKNGI 434 >UniRef50_C4ZM33 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T RepID=C4ZM33_THASP Length = 565 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 4/246 (1%) Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 ++ ++ S I L L + ++ + V + N + ER E A Sbjct: 319 IMLQIVIGMSLTGILLAAILARAITHPIEVLGAAVQNFYDNDQAPA-LPVERQDEIGALA 377 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTS 280 F L ++ + L+ + +L A HD LTGL NRA F + + ++ Sbjct: 378 RRFAELRTQIGQQLAELEHRRRELEHLARHDALTGLPNRALFDDRMAVALASARRDDGGL 437 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 ALLF+D D+FK IND GH GDRVL +A R+ + A R+GGDEF ++L + S Sbjct: 438 ALLFVDIDDFKPINDRLGHVVGDRVLEGVAARIRQSIRESDTAARIGGDEFVVLLPGIAS 497 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 + + + + + PF + +G + +++S+G A + + L AD MY+ K Sbjct: 498 AEDARVVADKIRAAIDRPFMI-DGGELAVSVSMGLAHYPQDGSDSTTLARHADAAMYRDK 556 Query: 400 HQRAEK 405 + + Sbjct: 557 AEGKAR 562 >UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNW4_DESVM Length = 1076 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 4/171 (2%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSALLFLDGDNFKYINDT 296 +L A HDPLTGL NR F + + + R+ T A+L+LD D FK IND+ Sbjct: 624 HESRERLEHQAFHDPLTGLPNRVLFHDRLQMALKRAARRRNYTFAMLYLDLDRFKVINDS 683 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L ++ +L E R GGDEF ++L + + ++ + Sbjct: 684 LGHDVGDALLKVVSAKLRECVRDVDTVARFGGDEFGVLLEETPTRGTAVRVARRIRAHLA 743 Query: 357 LPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAEKL 406 P + H+ T SIG + T ++++ E+L AD MY+AK Q + Sbjct: 744 EPVRIGP-HEVFTTASIGIVLRTDQYSTPEELVRDADTAMYRAKEQGQSRF 793 >UniRef50_Q478M9 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q478M9_DECAR Length = 523 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Query: 227 LLDEMEEWQLRLQAK-NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLF 284 L+ LR+ A+ +L A HDPLTGL NRA F ++ + + AL+F Sbjct: 338 LMVTGRARALRMAAEMTEELRHMAQHDPLTGLPNRALFSDRLHKELARAKRHDGQFALVF 397 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D+FK IND +GHA GD VL ++A RL + R+GGDEF +++ ++ Sbjct: 398 LDLDHFKPINDNYGHAIGDLVLQQVALRLKDTVRESDTVGRIGGDEFVVLVPELAESDAA 457 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRA 403 + + Q+ PF L +G Q ++ S+G A+ + E L + AD MY+AK Sbjct: 458 LSLAEKIRQVIRQPFAL-DGRQLDISCSLGVAIYPDDGIDEISLTKRADEAMYRAKDDGR 516 Query: 404 EKLVR 408 + + R Sbjct: 517 DSVRR 521 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 4/168 (2%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTW 297 + AQL A HD +T L NR F + + +++ A+LFLD D FK IND+ Sbjct: 431 STRAQLEFKAQHDEMTQLPNRVLFMERLTHAFRMAKHQQSRLFAVLFLDLDRFKIINDSL 490 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++LIE++KRL + + R GGDEFA++L V+ E + + Q Sbjct: 491 GHRVGDQLLIEVSKRLQQCLRKQDTIARFGGDEFAILLDTVEDADEAIHVAQRILQALKA 550 Query: 358 PFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAE 404 L H+ + SIG + + ++ + E+L + +D MY+AK Q Sbjct: 551 KISLEE-HEVYTSASIGITVSSPDYQAPEELLQDSDTAMYRAKKQGKN 597 >UniRef50_B8KDQ1 Ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KDQ1_VIBPA Length = 452 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 96/387 (24%), Positives = 165/387 (42%), Gaps = 39/387 (10%) Query: 34 WLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAE 93 W+ L +LKQ L Y + A F + ++L AL Q + + Sbjct: 59 WVFLQFGDQSSLKQVEYAQAELATQLTAYGEQGA-RFDNLQRMNQSLQALLTQEK----Q 113 Query: 94 VRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSIS 153 + D+ ++ + F S + I+Q + + +V + S++S Sbjct: 114 LYDRD--------VASEEGINAFGLLHSRYNM---IVQNMTEELAHVHQVVVDRSASNLS 162 Query: 154 HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER 213 + + + A L C LL S IA + + + I + N +V Sbjct: 163 NVMKSAAAWLIVCSLLVSFIAWLILLRFKSDAESVKEAIVALAK-----GNLEAKVDTAS 217 Query: 214 IA-EFHRFALDFNSLL--------------DEMEEWQLRLQAKNAQLLRTALHDPLTGLA 258 + EF A FN + +E++ ++L+ K+ QL+ + HDPLTGL Sbjct: 218 MDSEFKGIAFFFNQMTISLRESTVTKHELEEEVKRQTMQLEKKHEQLIFLSEHDPLTGLY 277 Query: 259 NRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 NR AF + + ++ K A+LF+D D+FK +NDT+GH GD +L+ +A RL+ Sbjct: 278 NRRAFDKSLENAIVKANRTKCKLAILFIDLDDFKVVNDTYGHDAGDAILVNVANRLSNAI 337 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 RLGGDEF + L + + + Q + Q P NG + +++ SIG + Sbjct: 338 RQSDFVGRLGGDEFVICLDLLNNFDILPQKVEQIMQAICEPIGF-NGRELSISASIGVSH 396 Query: 378 TIEHA-SAEKLQELADHNMYQAKHQRA 403 + + E L +AD MY++KH + Sbjct: 397 FPDSTRNKEVLLSMADEAMYRSKHVKG 423 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 3/168 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGDNFKYINDTW 297 + +++ A HD LTGL NR R I L++++ ++ A+LF+D D+FK IND+ Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L +A RL R GGDEF +VL + + ++ + F L Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF +H ++ + SIG A+ + +AE L + +D MY AK Sbjct: 562 PFHIHK-NELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN 608 >UniRef50_A4U4H0 Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4H0_9PROT Length = 543 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 4/228 (1%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQ 239 + L L +H + R + E A FN LL + E + L+ Sbjct: 315 IMLPRLFRPLTQAARQLHRMARGEQEIRSLPIHSDDEVGEVAKGFNFLLGVLREKEEALR 374 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWG 298 A++ A HD LTGL NRA F ++ + + + + ALL++D D FK IND+ G Sbjct: 375 QSEARMSHLAHHDMLTGLPNRAMFEDRLDQALMRAQRQGQGFALLYVDLDGFKPINDSKG 434 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES-EVQQICSALTQIFNL 357 H GD +L +A L R+GGDEFA++L D+ + +I Sbjct: 435 HQAGDAMLRHVADCLTSQLRQTDTVARIGGDEFAILLTDLDDPAPTASRIAEQCRNAARQ 494 Query: 358 PFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAE 404 P + + + + LSIG A + SA L ADH MY+ K Q Sbjct: 495 PLNWGD-TELRVDLSIGIACYPFDGRSAGDLLRHADHAMYEVKGQHKS 541 >UniRef50_A0KQV8 Gaf domain/GGDEF domain/eal domain protein n=2 Tax=Aeromonas hydrophila RepID=A0KQV8_AERHH Length = 761 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 16/231 (6%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQ 239 L+ L+ I +HD+ S + ++R+ + R +++ + Q Sbjct: 274 RSQLTLLLELRRIRQQLHDINSEDSINQRLQQLRQTNL------------RLQKQLKQHQ 321 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTW 297 +L ALHDPLT L NRA + +N M + K+ +L+F+D D+FK +NDT Sbjct: 322 ELERRLQFDALHDPLTQLPNRALLMNHLNHAMTHFHRYKSPGFSLIFIDVDHFKQVNDTL 381 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH+ GD++L E+++RL RLGGDEF + L + ++E ++ + + + + Sbjct: 382 GHSAGDQLLKEMSRRLQTCIRQNDMVARLGGDEFVIYLDNSKTEEDISPVLNRIISRLSY 441 Query: 358 PFDLHNGHQTTMTLSIGYA-MTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 PF L G++ +T+S+G A ++ + + +L AD MYQAK ++V Sbjct: 442 PFRLM-GNELGITVSLGVASVSEQTSDISQLLHQADLAMYQAKRNGRSRIV 491 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 14/231 (6%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + + ++ I + H +F +S I EF + D + +A Sbjct: 198 FIDKIKKSKSIIFERTHTHIKGYDFPVEISISYI-EFEEKTYVLAVMRDI-----SQRKA 251 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLDGDNFKYINDTWGH 299 + + A +D LTGL NR + L++ + AL +LD D FK +ND +GH Sbjct: 252 DEKLIWQQANYDHLTGLPNRRLLLDRLEQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGH 311 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV-----QQICSALTQI 354 A GD +L ++AKRL + RLGGDEF +++ +++ E + ++I A+ Sbjct: 312 AKGDLLLQDVAKRLTQCVRKSDTVARLGGDEFTIIIAELEDEDKANKITVERIAQAILNA 371 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 N PF L N Q ++ SIG E A+ ++ L AD MY AK Q Sbjct: 372 LNRPFKLDN-EQVYISASIGITFYPEDANFSDVLLNAADQAMYAAKKQGKN 421 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGD 288 +E+ LR + QL R A HDPLTGL NRA F + M R+ A++++D D Sbjct: 406 SVEDITLR-KKAEDQLKRQAFHDPLTGLPNRALFLDHLRMAMERGRRRRHLFAVIYMDLD 464 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK IND+ GH TGD +L +A+ L + G R GGDEFA+++ ++ + + I Sbjct: 465 RFKVINDSLGHETGDELLRSVARVLEKCGRSVDTIARFGGDEFAILIEEISASRDAIAIA 524 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + PF + NG++ + S+G + + E L AD MY+AK + Sbjct: 525 RRILDGVRQPFTI-NGNEVFTSASLGIVLKTDGYDRPEALLRDADTAMYRAKEHGKSRF 582 >UniRef50_C7RLE3 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLE3_9PROT Length = 649 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 11/224 (4%) Query: 191 NITDVVHDVRSNRNFSR----RVSEERIAEFHR----FALDFNSLLDEMEEWQLRLQAKN 242 + D +H VR + ++ R + + E+ E RL+ Sbjct: 416 ALADRIHVVRREKELAQAEALRAKVAAMDALQQSERTLEQRVVRRTAELAEANERLRQSE 475 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHAT 301 A+L + A HDPLTGLANR+ + + T A+L +D D FK +NDT+GHA Sbjct: 476 AELRKLAHHDPLTGLANRSLLYDELRRSIARGKRGGETFAVLMIDLDGFKPVNDTYGHAV 535 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GDR+L IA RL E + RLGGDEF +V+ V + + I + + + + P + Sbjct: 536 GDRLLEVIAPRLQECVRVSDVVARLGGDEFVVVVEGVLDQHQALAIGAKIIAVLSQPLHI 595 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAE 404 H + S+G A+ + + L + AD MY AK Sbjct: 596 G-AHDIQVGASVGVALWPQDGDDTQHLLQSADRAMYLAKQAGRG 638 >UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U2V9_MARAV Length = 908 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 6/232 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 L R + K + V VR R + A N ++ + + Sbjct: 407 LQRGFEESMASPGKQMPVVRARVRDADGQWRDMEGTFTAMLSVPG--VNGVVLSLRDLT- 463 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 +L+A ++L R A +DPLTGLANR FR +N ++ S + +AL+FLD D FK IND Sbjct: 464 QLKAAQSELHRLAFYDPLTGLANRQLFRDRLNHVVRRSRRSGEAAALMFLDLDGFKRIND 523 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L ++A+ L RLGGDEF ++L + ++ + + Sbjct: 524 TLGHDAGDELLRQVAQWLEGCVREEDSVARLGGDEFVVLLSRISGSEAAGKVAENILRRL 583 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L N H+ +T+SIG M + A L + AD MY+AK Sbjct: 584 CQRIRL-NDHEVGVTVSIGITMIPHDSEDAGALMKYADLAMYRAKELGRNTY 634 >UniRef50_Q2W736 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W736_MAGSA Length = 459 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 8/226 (3%) Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH-RFALDFNSLLDEMEEWQLRLQAKNA 243 L + K + V + + R E ++E F +L ++ E + Sbjct: 219 LSGSAKLMGRSVESMGYRADGGRFPMEISVSELRYGKGRLFTGILRDISER----KENEE 274 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATG 302 ++ R A HD LTGL NR I+ + A+L++D D FK INDT GH G Sbjct: 275 RIKRLAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLDKFKPINDTLGHEAG 334 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D VL E+A+RL R+GGDEF +V+ ++ E + + + P Sbjct: 335 DAVLKEVARRLDNCVRSSDTVSRVGGDEFVVVVEEIGRPGEAAMVARKIIEALGTPVPYE 394 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + H + SIG A+ + + E++ + AD MY+ K+ Sbjct: 395 D-HSCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVKNSGRNGYC 439 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 3/168 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTW 297 + + + R A +D LTGL NR F ++ + N+ A+LF+D D FK +ND++ Sbjct: 316 KKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAARTGMLLAVLFIDLDRFKEVNDSF 375 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH+ GD +L+E AKRL RLGGDEF ++L + + ++I + Sbjct: 376 GHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIILNGINDQHCAERIIQMILLELTK 435 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAE 404 PF L N +T SIG SAE L + AD MY AK+ Sbjct: 436 PFHL-NAKLAYVTASIGVTFFPADAGSAEILMKNADQAMYAAKNNGRN 482 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 3/220 (1%) Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 L + D + + N EE I E + L + L+ + +L Sbjct: 215 LMGLLDQSKNTQGNLLLREVQVEESIYEQYVHYLPNHQLIRSYLFDITERKRTEQKLKYQ 274 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LTGL NR F + +NN+ ++T A+LFLD D FK INDT GH GD+VL Sbjct: 275 AFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKNINDTLGHTFGDQVLQ 334 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 + KRL R GGDEF ++L + + ++ + + PF++ Q Sbjct: 335 KFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRILDVLKHPFEIQK-QQF 393 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + S+G ++ + E L + AD +Y+AK + Sbjct: 394 YIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNHF 433 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 RS + VS + + H ++ +L ++ + + +L A HD LTGL N Sbjct: 575 RSGEYYPAWVSISTVHDNHGSLQNYVVVLTDIS----QRKQAEERLQFLATHDGLTGLPN 630 Query: 260 RAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R + + + + + +LF+D D FK INDT GH GD +L E+A RL E Sbjct: 631 RTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLR 690 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF +++ D + + + + PF L + ++ SIG ++ Sbjct: 691 QTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQ-QELYISASIGISVY 749 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + L + AD MY+AK Sbjct: 750 PDDGVDISSLLKNADMAMYRAKDDGKNTF 778 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 216 EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD 275 EF A NS++D + +QA+ L A HD LT L NR + ++ +++++ Sbjct: 413 EFKHLASSVNSMIDGLN-----MQAEE--LRHRAFHDHLTSLPNRMHSSTQLDLMISHTI 465 Query: 276 ARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV 334 + T+ALLF+D D+FK INDT GH+TGD +L ++++RL RLGGDEF ++ Sbjct: 466 KHQATAALLFIDLDHFKEINDTLGHSTGDELLRKVSQRLRRSVREEDIVARLGGDEFTVI 525 Query: 335 LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADH 393 +++ S+ + I L P+ L +G++ ++T SIG + E +E L AD Sbjct: 526 TGVLETRSDAESIAQKLLNELIRPY-LIDGNELSVTASIGVSFFPEDGDNSEILLRNADS 584 Query: 394 NMYQAKHQRAEKL 406 MY+AK Sbjct: 585 AMYEAKRNGRNGY 597 >UniRef50_A8G0F6 Diguanylate cyclase/phosphodiesterase n=9 Tax=Shewanella RepID=A8G0F6_SHESH Length = 828 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 17/306 (5%) Query: 107 YTRKDPGDTFSNFISHWLFP------APIIQPIRHNGETIGEVRLTARDSSISHFIWFSL 160 T+ + + + W+FP +P I I N + + L S+ + F+L Sbjct: 244 ATKGGIYEVNGEYSAIWIFPLAEEANSPAILVI--NNISDWQAILNEFQESMLGTLLFAL 301 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRF 220 VL+GC+++ A ++ H L+ L HD + + S + S + E Sbjct: 302 -VLSGCLVILVAWAPVVSLSRHANLLPLLAE-----HDFETLKKLSPKSSSLIVDEVDLI 355 Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKT 279 + L + ++ +L + +L R A+ D LTGL N+A + + Sbjct: 356 NTATHQLAERLQNLELEVDEYTCELKRLAMLDTLTGLPNKAMLMHELKKTIACVGRIHDQ 415 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 AL++LD D FK INDT GH GD +L +A RL +R GGDEF ++L ++ Sbjct: 416 VALMYLDLDEFKRINDTLGHTQGDELLKIVATRLNNSVRAMDTVFRQGGDEFLILLRGIR 475 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQA 398 S+ +V+++ + P L N H+ +T SIG A + AE+L + AD MYQA Sbjct: 476 SDQDVRKVIHKIFASLQQPVVLGN-HKLIVTTSIGVAYCKSMNVRAEELIKYADLAMYQA 534 Query: 399 KHQRAE 404 K Sbjct: 535 KDAGRS 540 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 3/173 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 + QLLR A +D LTGL NR + + + ++ ++FLD DNFK+INDT Sbjct: 377 RKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDT 436 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +LIE A+R++ RLGGDEF +VL + Q+ + + F Sbjct: 437 LGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFA 496 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLVR 408 PF L G + +T SIG A + + + L + AD MY+AKH+ R Sbjct: 497 PPFMLS-GQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYAR 548 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 78/263 (29%), Gaps = 33/263 (12%) Query: 3 DNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQY------AQKNLALT 56 D + + F+ A +I + L + + Y ++ + + Sbjct: 13 DMPDIATRLKRFRAASPLSFRLVAWILLFSSAFTLLASGIQIYSDYREDLSKIEQRMQVI 72 Query: 57 AATMTYSLEAAVVFADGPAATETLAALGQQGQF--STAEVRDKQQNILASWHYTRKDPGD 114 + SL ++ D + + + + ++ Sbjct: 73 ESGYRSSLAQSLWALDQKHLQTQMDGILSLPDIEHLRLRIEPDSELVMGELPRDTDTLTH 132 Query: 115 TFSNFISHWLFPAPIIQPIRHNGET--IGEVRLTARDSSISHFIWFSLAVLTGC-ILLAS 171 +F I + +GE+ +TA + + + + L+ Sbjct: 133 SFEL--------------IYRDDAEFRLGELTITASLHRVYDELRRRVGFILATQFLIIF 178 Query: 172 GIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER-------IAEFHRFALDF 224 ++I + + + L ++ D D+ S RN SR + +R E Sbjct: 179 VVSILILWIFRHLVTRHLADMADYTRDL-SLRNLSRPLELDRPDTPAYQRDELGMVTEAI 237 Query: 225 NSLLDEMEEWQLRLQAKNAQLLR 247 N + + + + R + A++ + Sbjct: 238 NQMRERLIDDVTRRERDEAEIRK 260 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 7/207 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 ++ + R S I+ + ++ +++ + + + +A L A +D LTGL N Sbjct: 365 KNGELYWERASISPISNQQGIVTHYVAVKEDITKEKQQAEA----LFHQAHYDHLTGLPN 420 Query: 260 RAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R + + + ++ + L+FLD DNFK +NDT GH GD++L+E+++RL Sbjct: 421 RILAKDRLQQAIESALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALR 480 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 RLGGDEF ++L V ++ I L ++ P +L G + + SIG + Sbjct: 481 QTDTVARLGGDEFLIILDQVSHSRKLMAIAQRLLRVMRQPVNLQ-GLEFFVHGSIGITVF 539 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAE 404 + A+ L AD MY AK Sbjct: 540 PDDGFHADVLLRNADTAMYAAKLAGRN 566 >UniRef50_UPI0001698C53 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C53 Length = 457 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 3/167 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 L+ Q+ A HDPLTGL NR F + + + A+LFLD D FK IND+ Sbjct: 251 LKHSLEQIEHLANHDPLTGLPNRLLFLDRLKVAVRQARRGGHALAVLFLDIDRFKDINDS 310 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GD++L+E+A R+ RLGGDEF +++ DV+S SE + + + Q Sbjct: 311 LGHAMGDQLLLEMAARVRGQVREEDTVARLGGDEFVILIGDVESASEAELVARKVMQGLE 370 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 +P L + + +S+G ++ SA++L AD MY AK + Sbjct: 371 VPIRLETS-EIILRVSMGISLYPNDGESADELIRHADIAMYHAKERG 416 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 4/180 (2%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA--RKTSALLFLDG 287 E+ + QL ALHD LT L NR I + + ALLF+D Sbjct: 563 EVNRDITERKLAQFQLEHNALHDALTELPNRLLLMERIQAAIQRAKRKPHYHFALLFIDL 622 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK INDT GH GD +L+ IA RL RLGGDEF ++L D+ ES+ I Sbjct: 623 DRFKTINDTLGHLVGDHLLVAIATRLQHCVRSGDTVARLGGDEFIILLDDLLEESDAFPI 682 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 + P ++N Q + SIG + +E L AD MY AK Q + Sbjct: 683 TERILGRIKEPLVINN-QQIQTSASIGIVFNRDGNESETDLLRNADLAMYSAKEQGKSRY 741 >UniRef50_Q0A9L9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9L9_ALHEH Length = 494 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 3/170 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTW 297 ++ ++ A HD LTGL NRA + + + + ALLFLD D+FK INDT Sbjct: 302 RSVTQKMAYLAHHDSLTGLPNRALLAERLGRALGAARRHDRQLALLFLDLDHFKRINDTM 361 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD L A RL++ RLGGDEF ++L ++ S + I + Sbjct: 362 GHDIGDHALRGTAYRLSDCVRETDTVSRLGGDEFVVLLEEIDSPDDAAHIAEKVLAAITA 421 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P + + H ++ SIG ++ +H AE L + AD MYQAK + Sbjct: 422 PLHVGD-HTLQVSASIGISIFPQHGADAETLHQRADAAMYQAKAKGRAGY 470 >UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCS0_9BURK Length = 665 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 87/403 (21%), Positives = 155/403 (38%), Gaps = 26/403 (6%) Query: 23 MTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETL-- 80 + + +++I + L +LTL+Q + + E A++ + E + Sbjct: 16 LRYTMMLVVVIGVTLPAILLLTLEQQLAEKSQ---KALLAQSETALMKIGSVSIAEPMWV 72 Query: 81 ----------AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII 130 A L + Q + D N R D + S Sbjct: 73 VDRVALDAAAARLLESPQVVAVRIEDGLANT-PEMERIRPDFAGSLDKDTSAGRLTRR-T 130 Query: 131 QPIRHNGETIGEVRLTAR---DSSISHFIWFSLAVLTGCILLASGIAI--TLTRHLHNGL 185 Q + +GE +G + + + + VL +LA + L + + Sbjct: 131 QSVIRSGEPLGTLVVWFDASYGQGLLQARRDQMLVLVALQVLAILAVLMPVLVSRVLRPI 190 Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 LK + D + + R E + +E+ +L KNAQL Sbjct: 191 ER-LKEHASALLDHSRDDGPGQVFVWRRQDELGLLGRHLGRVQEELRGLFTQLGNKNAQL 249 Query: 246 LRTALHDPLTGLANRAAFRSGINT-LMNNSDARKTSALLFLDGDNFKYINDTWGHATGDR 304 + A +D LTGL NR+ F + +++ ++ + F+D D FK +ND+ GHA GD Sbjct: 250 QQMAFYDQLTGLPNRSLFIDLVQREMLSAQRNQQQFGIFFIDLDRFKAVNDSMGHAAGDA 309 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +LIE+A+RL E R GDEF +++ D++ + ++ + + P L N Sbjct: 310 LLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQRVLRSIEAPVVLANA 369 Query: 365 HQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 ++ SIG ++ E E L + AD +YQAK + Sbjct: 370 -PVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRARY 411 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 6/171 (3%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGI----NTLMNNSDARKTSALLFLDGDNFKYIN 294 +A QL A D LTGL NRA F + + ++ A+LFLD D FK +N Sbjct: 475 RAAQQQLTFLAQRDALTGLYNRAYFSQRMQAVMEQAASQANEGHQVAVLFLDLDGFKKVN 534 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GD +L +A+RL+ RLGGDEF ++L +V+S E +++ + Sbjct: 535 DTAGHEAGDHLLRIVAQRLSACVRQSDTLARLGGDEFVVLLDNVRSLGEAERLAKRIVHS 594 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF +G + + SIG A+ EH A L AD MY AK Sbjct: 595 IAQPFS-TSGTEYYLGASIGIALYPEHGNDAATLLRCADAAMYNAKQNGRN 644 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 + +L A HDPLT L NR F+ + + + ALLF+D D FK +NDT Sbjct: 380 RKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLDRFKQVNDT 439 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L ++A+RL+ RL GDEF ++L DVQ + + + ++ Sbjct: 440 MGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQ 499 Query: 357 LPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 P L G + ++ SIG ++ + + L +LAD MY+AKH Sbjct: 500 EPVALTGG-EAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRAKHLGRNSC 549 >UniRef50_C5T8B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8B3_ACIDE Length = 566 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 99/255 (38%), Gaps = 4/255 (1%) Query: 152 ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSE 211 + + + +L+ S + + L + + L+ + + Sbjct: 312 VQDEVLELGRGIFKMLLILSAVGMLLATLVSRAVTSPLQAMVRAARAFSQGEPHGA-LPV 370 Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 ER E A + + ++ L A + A HD LTGL NR F + + Sbjct: 371 ERQDEVGELARSLSDMEQQITRQIAELNASRDSMAHLAHHDLLTGLPNRRMFEQRLEQAL 430 Query: 272 NNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 S + AL F+D D+FK IND GHA GD VL A+ + RL GDE Sbjct: 431 ELSRRSGRACALFFVDLDDFKSINDDLGHAAGDAVLQATARAIVAAVRQADTVARLAGDE 490 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQE 389 F ++ +V +E I L Q F P L G + SIG ++ A A+ L Sbjct: 491 FTVLCENVDTEEAALHIAEKLQQAFAQPLQLG-GKSLEVHASIGLSLFPRDAHDAQSLLA 549 Query: 390 LADHNMYQAKHQRAE 404 AD MY+ K R Sbjct: 550 SADAAMYRVKQSRRN 564 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 RL+ A++ A +DPLTGL NR + + ++ R A++F+D D FK IND Sbjct: 417 RLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRIND 476 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD++L+EIA RL R+GGDEF +VL ++ E + + Sbjct: 477 SLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAEL 536 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P ++ G + +T S+G A+ + + A+ L + AD MY+AK + Sbjct: 537 RRPVNV-EGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSF 587 >UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W5F5_9CYAN Length = 776 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 12/179 (6%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDT 296 + QL A +D LTGL NRA F ++ + + T ALLFLD D FK +ND+ Sbjct: 308 KLAKDQLQTRAFYDTLTGLPNRALFMDRLSHTVERAKRHPTYRFALLFLDLDRFKVVNDS 367 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD++LI IA+RL RLGGDEF ++L D++ ++ + Q Sbjct: 368 LGHLVGDQLLIGIARRLESCLRTEDTVARLGGDEFTILLEDIEDIHHATRVAERIQQELA 427 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIE---------HASAEKLQELADHNMYQAKHQRAEKL 406 PF+L +GH+ S+G ++ E + E L AD +Y+AK + Sbjct: 428 APFNL-DGHEVFTGASVGIVLSREIRKEGDITNYDCPEDLLRDADTALYRAKALGRSRY 485 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 8/221 (3%) Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 K + + EF + ++ E +A Q+ A Sbjct: 331 KPMVRETFRQHRDGRLIPVSMIGFPIEFGGQPQGIVYIYQDISER----KAFEEQITHQA 386 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARK--TSALLFLDGDNFKYINDTWGHATGDRVLI 307 HD LTGL NR+ F ++ + + R A+L +D + FK INDT GH GD++L+ Sbjct: 387 FHDALTGLPNRSLFADRLDRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLV 446 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E+++RL RLGGDEFA++L +++S+ EV + + P L G Sbjct: 447 EVSRRLMACVRSMDTVARLGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLC-GTTV 505 Query: 368 TMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAEKLV 407 T S+G + T ++ S E + AD MY+AK ++ Sbjct: 506 TPGASVGIVLRTRDYQSPEDILRDADIAMYRAKESGRPSMI 546 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 13/222 (5%) Query: 197 HDVRSNRNFSRRVSEERI-AEFHRFALDFNSLLDEMEEWQL---------RLQAKNAQLL 246 H +R+N + + +R E + ++L DE + + + ++ Sbjct: 448 HALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERIN 507 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRV 305 A +D LTGL NR I +++ A+LF+D D FK IND+ GH GD + Sbjct: 508 YLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDAL 567 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L +A RL RLGGDEF +L ++ S EV + + + F L + Sbjct: 568 LKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGE-Y 626 Query: 366 QTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 Q ++T SIG + + +L AD MYQAK Sbjct: 627 QLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNF 668 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 3/193 (1%) Query: 216 EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD 275 + + + + + + +L A D LT L NR F+ ++ M + Sbjct: 297 QIRHHTRALRAQSEALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAK 356 Query: 276 ARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV 334 + ALLF+D D+FK +ND+ GHA GDR+L EIA+R RLGGDEF ++ Sbjct: 357 RHERLIALLFIDLDDFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVI 416 Query: 335 LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADH 393 L D+Q + L PF L TM+ SIG + +AE L + AD Sbjct: 417 LTDIQRPEDAVTFVRKLLDTLRAPFMLGE-QSITMSASIGITLYPSDDTAEADLLKDADT 475 Query: 394 NMYQAKHQRAEKL 406 MYQAK + Sbjct: 476 AMYQAKSRGKNTF 488 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDT 296 R + +LL A HD LTGL NRA F + + A+LF+D D FK IND+ Sbjct: 314 RRKQAEEKLLHEASHDALTGLPNRAFFMERLGEALRRPGDGDRVAVLFIDLDRFKMINDS 373 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GHA GDR+L+ A+RL + RLGGDEF ++L V SE E + L + Sbjct: 374 LGHAMGDRLLVAAAERLKGCLRPQDTLARLGGDEFTVLLEGVSSE-EAASVADRLLERLR 432 Query: 357 LPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAEK 405 PF L +G++ S+G + E A E+L AD MY+AK + Sbjct: 433 EPFRL-DGYELFTAASVGVVLGGRERAGPEELLRDADIAMYRAKALGGGR 481 >UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYS6_METML Length = 934 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + + + L R A HDPLT L NRA + + ++ + A+ LD D FK +ND Sbjct: 486 QAKEQQQNLERMAYHDPLTQLPNRALLSDRLQQALARAERSGELLAVCCLDLDGFKPVND 545 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L+++A R++ RLGGDEFA++L +QS E Q L + Sbjct: 546 TLGHEAGDYLLVQLAVRMSACLRDSDTVARLGGDEFAVLLCGLQSIDECTQTLERLLSVI 605 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+ + + T++ SIGY + + + L ADH MYQAK ++ Sbjct: 606 KTPYSIGD-KSVTVSSSIGYTIFPDDGCEPDTLLRHADHAMYQAKLNGGSRV 656 >UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWY3_RHORT Length = 683 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 2/169 (1%) Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWG 298 A ++Q + HD LTGL NR F+ + T + ++ R A+LF+D D+FK +ND+ G Sbjct: 251 ATDSQAWQQVNHDTLTGLPNRVLFQDRLLTALASARRRNDQLAVLFVDLDHFKTVNDSLG 310 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H+ GD++L ++A RL++ R+GGDEF + L + + I + + + P Sbjct: 311 HSFGDQLLQQVATRLSQCLRDSDTLARMGGDEFTIALTGDGHQRDYAMIANRILETLRRP 370 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 F L GH+ + SIG + A + L AD MY+AK Sbjct: 371 FTLEGGHEVLIGSSIGITLFPNDAEDVDTLLRNADTAMYRAKASGRNAF 419 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 3/188 (1%) Query: 217 FHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA 276 F +++F L + + + +L A DPLT L NR+ F + M ++ Sbjct: 555 FTSSSINFLQSLANILATAIDRKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHR 614 Query: 277 -RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVL 335 R+ ++F D D FK +NDT GH+TGD +LI +AKRL + RLGGDEFA++L Sbjct: 615 NRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALIL 674 Query: 336 YDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHN 394 D+ + I + +PF+L + ++ S+G ++ A+ L AD Sbjct: 675 SDLVQPEDATLIAEKVISALQVPFEL-ETQEIYVSASLGISIYPGDGTDADSLLRNADTA 733 Query: 395 MYQAKHQR 402 M+QAK Q Sbjct: 734 MFQAKEQG 741 >UniRef50_B5W389 Diguanylate cyclase with PAS/PAC and Chase2 sensors n=4 Tax=Cyanobacteria RepID=B5W389_SPIMA Length = 729 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 3/180 (1%) Query: 229 DEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDG 287 + + + +L+ NA+L + A HDPLTGL NR F + + +D + L FLD Sbjct: 538 ETLRQLAEQLEKYNAELQQRADHDPLTGLPNRQLFEERLTQALIWADTNQKFVGLFFLDL 597 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 +NFK IND +GH GD VL +A+RL RLGGDEF ++L + S ++ ++ Sbjct: 598 NNFKPINDQYGHHVGDLVLKLVAERLRGCLRASDTVSRLGGDEFTIILPGIPSHADAVRV 657 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 + +L + H T+ LSIG ++ + E L + AD MY+AK + Sbjct: 658 AEKILDQVTQESEL-DSHVITIGLSIGISLYPLDSQDYETLVQKADAAMYRAKSRHQNSY 716 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 5/198 (2%) Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + + EF L E + + L ++ A +D LTGL NR F +N Sbjct: 481 IHVRIVPEFGEQGQVIGVLAVERDITE--LMEYRERIHYLAYYDALTGLPNRTLFADRVN 538 Query: 269 TLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 ++ ++ + L+ LD D FK +NDT GH GD +L+ +A+RL RL Sbjct: 539 QVLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLS 598 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EK 386 GDEFA++L ++++ ++ I + PF +H+ + ++ SIG A+ + Sbjct: 599 GDEFAILLPELRNPDDLATIARKINDEIAKPFLIHD-KELFISTSIGIAIYPDDGDDRAT 657 Query: 387 LQELADHNMYQAKHQRAE 404 L + AD MY AK+ Sbjct: 658 LFKSADVAMYHAKNYGRN 675 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 4/168 (2%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNFKYIN 294 + +L+ A +D LTGL NR F + + A+LFLD D FK +N Sbjct: 597 ERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHNPDDLFAVLFLDLDRFKVVN 656 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD++L+ +A+RL + RLGGDEF ++L +Q+ + I + Q Sbjct: 657 DSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTILLSHIQTIEDATDIAKHIHQA 716 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQ 401 PF+L G++ MT SIG A+ + L AD +Y+AK Q Sbjct: 717 LKPPFNLC-GYEVFMTASIGIALGTNKYVQPADLLRDADTALYRAKEQ 763 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 +++ +L A +D LTG+ NR F + + ++ K + ALLF+D D FK IND Sbjct: 476 KIKKTEDKLQSLAYYDLLTGIPNRTLFYERLENALIRANNNKGSVALLFMDLDGFKVIND 535 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD +L E+A R+ RLGGDEF ++L +V + + + ++ Sbjct: 536 SLGHAAGDLLLKEVAARIESSISRSDTVSRLGGDEFTVILENVNNHEDAKAAAESIIGKI 595 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 LP+ + G + T+ +SIG A++ + ++ E L AD MY AK K Sbjct: 596 LLPYSIL-GREITLGVSIGIALSPYDESTVEGLVRKADAAMYDAKESGKGKY 646 >UniRef50_B8GV15 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GV15_THISH Length = 450 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 11/232 (4%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNR---NFSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 TR + K + V + +R + + + E R + + E+ E Sbjct: 215 TREFMRAVFTTGKKQSGVEYRIRHADGSWRWHTSNASPVLDEAGRVSAYL-GIAREITER 273 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYI 293 + + AQ+ A HD LTGL NRA F + ++ + A + AL+F+D D FK + Sbjct: 274 ----KQQEAQIHHLAHHDLLTGLPNRAMFFDRLEAAIDEASAESRKLALMFVDLDRFKPV 329 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND GHA GD++L +A R+ R+GGDEF ++L+D+++E + L Sbjct: 330 NDRHGHAVGDQLLQAVAGRMHTILRAGDLVGRIGGDEFIVLLHDIRTEDDALTAAEKLRC 389 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 PFD+ G + ++ SIG A+ HA A +L AD MY +K + Sbjct: 390 HLETPFDI-EGRRLQISASIGIALYPSHADNARELARRADEAMYLSKAEGRN 440 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 3/173 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + + +L + HDPLT L NR+ F + ++ + +++ + A+L D D+FK +ND Sbjct: 846 QAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVND 905 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 ++GH GD +L +IA RL RLGGDEF ++L DV V + + Sbjct: 906 SFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTMMAEEILHQL 965 Query: 356 NLPFDLHN-GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P L + +++S+G A+ EH A +L + AD +Y+AK + Sbjct: 966 QQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGRARF 1018 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 4/186 (2%) Query: 223 DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSAL 282 D + + + R A +L+ A HD LTGL NR I + S R +A+ Sbjct: 246 DVTHFIGVLNDVTARTHA-EKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGR-LTAV 303 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +FLD D FK +ND++GHA GD ++ E+A R++ RLGGDEF ++L D+ S Sbjct: 304 MFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIE 363 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 + ++ + L + + + + ++ SIG A+ E L + AD MY+AK + Sbjct: 364 DAARLAAKLRDRLSESVRIGS-LELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKER 422 Query: 402 RAEKLV 407 Sbjct: 423 GRNNYC 428 >UniRef50_C5V7W9 Diguanylate cyclase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7W9_9PROT Length = 574 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 25/298 (8%) Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALK 190 P+ G I + + + ++ L +L + + + + +L N + L Sbjct: 269 LPVMGEGRRIATIAVLSSQEAVLKNTRQMLEILGLIAISSLVVILPFAWYLANSISRPLT 328 Query: 191 NITDVVHDVRSNRNFSRR----VSEERIAEFHRFALDF------------------NSLL 228 ++ V V S R R ++ R E A F SL Sbjct: 329 LLSRVFRGVASGRGMVNRELAELAGHRGDEMGELAESFFAMSQAVKQKIQQINEINASLE 388 Query: 229 DEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDG 287 D + + LQ N +L + A HD LTGL NR + ++ + KT AL+F+D Sbjct: 389 DSVAQRTRELQIANDELTKLATHDALTGLPNRQLVNDRLLQALSAARREKTTMALMFIDL 448 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK +ND +GHA GD +L E A+R+ E R+GGDEF ++L +++E + + Sbjct: 449 DEFKPVNDKYGHAVGDLLLKEAARRIHECLRKSDTVARIGGDEFIVLLPVIETELDACGV 508 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 + NLPF L G Q +++ SIG A+ EH E L + AD MYQAK+ Sbjct: 509 AEKIRASLNLPFYLS-GEQLSISSSIGIAIYPEHGLDEHALCQHADIAMYQAKNSGRN 565 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 + ++ A HD LTGL NR A + L+ + T A++F+D D FK IND Sbjct: 386 ERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIIND 445 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L E+A RL+ RLGGDEF ++L + S ++ + + Sbjct: 446 TLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISAL 505 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + + GH+ + SIG ++ + + + + AD MY AK Sbjct: 506 STAIE-AEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRN 554 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 6/234 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + R + N L + L+ D V + +++ A + + ++ M Sbjct: 338 IIRPVINHLYD-LETKIDEGEFVIDTSDEKQKILNFNSAPLEQLSDG-RRVVISMAIDVT 395 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYIN 294 + +L ALHD LT L NR F +N + T A+LF+D D FK IN Sbjct: 396 ERKKAEEKLRHNALHDTLTKLPNRLLFIDRLNQSIERIKRHPTYSFAVLFIDLDRFKLIN 455 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GDRVLI+IA +L R+GGDEF ++L D++S+ + I + + Sbjct: 456 DSLGHIIGDRVLIQIATKLTSCVRSLDTVARIGGDEFIILLNDLESKIKAIHIAERILET 515 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEKLV 407 LP + ++ SIG A + + A+ + AD MY+AK Q + + Sbjct: 516 LKLPIIIEQ-RNIVISASIGIAFNSQNNEEADDIIRNADLAMYKAKEQGKARYM 568 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 8/186 (4%) Query: 223 DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN-NSDARKTSA 281 +F ++ ++ E +A A++ R A +D LTGL NR+ + + R A Sbjct: 548 EFRAVARDISER----RAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLA 603 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSE 341 ++F D D+FK INDT GH GDR+L+E+A+RL RLGGDEF +L D +E Sbjct: 604 VMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDTDAE 663 Query: 342 SEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKH 400 ++ + L + P L + + T+T SIG AM + + + L AD MYQAK Sbjct: 664 G-AARVAAKLLEAVAQPLVL-DHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKR 721 Query: 401 QRAEKL 406 + Sbjct: 722 EGRNGF 727 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 7/231 (3%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 R + L+ + + ++ H R F +S + + + + +++ Sbjct: 386 AFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVFNDIS--- 442 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIN 294 +L+ QL R A +DPLTGL NR + + + + A++F+D D FK IN Sbjct: 443 -QLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTIN 501 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD +L+ IA+RL + RLGGDEF +V+ + +V I AL ++ Sbjct: 502 DSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEAP-VQQVASIAHALLKV 560 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + PF G + + SIG ++ SA +L AD MY AK Q + Sbjct: 561 VDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSN 611 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 3/189 (1%) Query: 220 FALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT 279 LD L+ + +A QL+ A HDPLTGL NR + + + KT Sbjct: 463 IDLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKT 522 Query: 280 SALLFL-DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 A+L L D D FK INDT GHA GDR+L +A+R+ E R GGDEF ++L D+ Sbjct: 523 QAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDI 582 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQ 397 + S+V + L+ + + P L +G + +T S+G ++ E + ++L AD MY+ Sbjct: 583 RELSDVVSLAQKLSDLVSQPV-LIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYR 641 Query: 398 AKHQRAEKL 406 AK + Sbjct: 642 AKEKGRNNF 650 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 +++ +QL R A +DPLTGL NRA + ++ + T A+LFLD D FK +ND Sbjct: 370 QIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVND 429 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GDR+L IA+RL R GGDEFA+VL DV V ++ L Sbjct: 430 SLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEI 489 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P DL +GH ++ SIG A+ A L + AD MY++K Sbjct: 490 ARPLDL-DGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRNTF 540 >UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT Length = 462 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 8/211 (3%) Query: 201 SNRNFSRRVSEERIAEFHRFALDFNS-----LLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 S +++R + E AE+ + FN + + + + + R A +D LT Sbjct: 247 SGELWNKRKNGELFAEWLSINVLFNEDGSKRMYVAIFSDVTEKKQADEIIWRQANYDMLT 306 Query: 256 GLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 L NR F + + + ALLF+D D FK +ND+ GH GD +L+++A+RL Sbjct: 307 QLPNRRLFCDRLEHEIRGAHRAGCLLALLFIDLDLFKEVNDSLGHEAGDALLVKVAERLT 366 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 R+GGDEF +L + S +V+++ + + + + PF++ NG ++ S+G Sbjct: 367 ASVRESDTVARMGGDEFTAILPQIDSLEDVERVAALIVKALSEPFEV-NGAIVNISASVG 425 Query: 375 YAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 A+ A + +L AD MY AK Q Sbjct: 426 VAIYPRDAKNTTELLSQADSAMYVAKEQGRG 456 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 5/184 (2%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLF 284 + + + + A+ QL+ ALHDPLTGL NR F + +++++ + A+LF Sbjct: 418 MAGSLSDISEQRLAQE-QLMHDALHDPLTGLPNRTLFMDRLRQVIHHARRHRNYNFAVLF 476 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D D FK IND+ GH GD +LIE+A R RLGGDEF ++L D+ E Sbjct: 477 VDLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTVARLGGDEFVILLDDLLEVEES 536 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRA 403 +I + + PF + NG + SIG A H E AD MY+AK Sbjct: 537 IRIAHRIQTLVQQPF-IINGQTVFTSASIGIAPKDTHHHKPEHYLRNADIAMYRAKAAGG 595 Query: 404 EKLV 407 + V Sbjct: 596 SRHV 599 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 14/223 (6%) Query: 197 HDVRSNRNFSRRVSEERIA-EFHRFALDFNSLLDEMEEWQL---------RLQAKNAQLL 246 + N++ + R E +++ DE E L+ + QL Sbjct: 358 KSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITALKKQQQQLE 417 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRV 305 + A +D LTGL NR + + + K A+ F D D FK +NDT GH+ GD++ Sbjct: 418 KIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTHGHSIGDKL 477 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 LIE+A+R + RLGGDEF +VL D+ S E + L + + P N Sbjct: 478 LIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAISKPI-FMNHT 536 Query: 366 QTTMTLSIGYAMTI--EHASAEKLQELADHNMYQAKHQRAEKL 406 + ++ SIG + A++L AD MY AK + Sbjct: 537 EICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNRY 579 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 2/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYIND 295 +++ A+L A +D LTGL NR +S ++ + + A L+LD D FK +ND Sbjct: 680 QIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVND 739 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +L+ +A RL + RLGGDEF +VL D++ +E + L + Sbjct: 740 SLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLL 799 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L +GH+ + SIG ++ A++ +L + AD MY AK + Sbjct: 800 ATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTY 851 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDT 296 L+ + QL A +D LT L NR+ + + S + A+LF+D D FK +ND Sbjct: 843 LKEQQRQLEHIAHYDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKKVNDL 902 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L+E++KR+ R+GGDEF +VL ++ + S+ + I L + + Sbjct: 903 HGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDCEMILRRLLESTS 962 Query: 357 LPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 D+ G +++ SIG ++ A+ L AD MYQAK + Sbjct: 963 ESVDI-EGEVVSVSASIGVTFYPKDNVDADLLMRHADQAMYQAKQSGKNRY 1012 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 4/171 (2%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 +++ ++ A HD LTG+ NR+ + + + +KT A+LF+D DNFK IND+ Sbjct: 1065 IKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDS 1124 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD++L + +RL RLGGDEF VL DV S +V + + + Sbjct: 1125 LGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDV-SLEKVNSVAARIVDFLG 1183 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 F + N ++ SIG ++ + + L + AD MY+AK + + Sbjct: 1184 ASFSI-NDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQY 1233 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 96/220 (43%), Gaps = 13/220 (5%) Query: 199 VRSNRNFSRRVSEERI-AEFHRFALDFNSLLDEMEEWQLRL---------QAKNAQLLRT 248 V + V R E L N+L D + Q + + + + Sbjct: 521 VEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQ 580 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A +D LTGL NR +N + SD+R + AL+FLD D FK +NDT GH GD +L Sbjct: 581 ANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLS 640 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 E AKRL RLGGDEF +VL V V ++ + P++L Sbjct: 641 EAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGE-ETA 699 Query: 368 TMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 ++ SIG + + AS E L + AD MY AK + + Sbjct: 700 YISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNRF 739 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 3/173 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDT 296 ++ ++L A HDPLT L NR F + + ++ + + LLF+D D FK IND+ Sbjct: 304 IKETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDS 363 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GDR+L+++A+RL RLGGDEF +++ + + E + + L Sbjct: 364 LGHQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMR 423 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 PF L + + SIG + E L + AD MY+ K + + Sbjct: 424 QPFFLEE-TELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRDGFCK 475 >UniRef50_Q0B027 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B027_SYNWW Length = 319 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 9/239 (3%) Query: 174 AITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA------LDFNSL 227 + L+ LH+ + +++I V + + + + Sbjct: 73 SRFLSGALHHCFIAPVEDIRKDVRQNLLVEPLDYDDEKYMLLQISDLTGHYSRVKQLKHM 132 Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLD 286 + E++ +++A A HD LTGL NR F ++ ++ + K A++FLD Sbjct: 133 IKEIDSEYEQVRAAEKINRFKAFHDALTGLPNRYLFYDRLDNAISMAQRNKEMLAVVFLD 192 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK +ND +GH GD +L +A+RL E RLGGDEF + ++SE++ Sbjct: 193 LDGFKEVNDNYGHEAGDHLLQVVAERLRELLRESDTLARLGGDEFLFIFPQIKSEADAAT 252 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 I + PF G + +T SIG ++ + A ++ L AD MYQ K+ Sbjct: 253 IAKKILTALANPFMFW-GREVYLTASIGISLYPKDAKNSRNLINKADLAMYQVKNSGKN 310 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 3/173 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 + +L A HD LT L NR ++ ++ + + ++T A++F+D D FK+IND Sbjct: 1071 ERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHIND 1130 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD +L ++A+RL + R+ GDEF VL D++ + + L +F Sbjct: 1131 SMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVF 1190 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 PF L G MT S+G ++ + L AD MY+AK + Sbjct: 1191 EEPFPL-EGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYC 1242 >UniRef50_A9CEW9 GGDEF family protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CEW9_AGRT5 Length = 772 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 150/372 (40%), Gaps = 31/372 (8%) Query: 54 ALTAATMTYSLEAAVVFA-DGPAATETLAALGQQGQFSTAEVRDKQQNILASWH-YTRKD 111 + A + A +F D A +Q + D + LA+ ++R Sbjct: 127 DVLALIGAQTKNAVWLFRYDEDDAG------FRQIAAAFDNATDDNEKPLATDPIFSRDA 180 Query: 112 PGDTFSNFIS------HWLFPAPIIQPIRHNGETIGEVRLTARDSSISH-----FIWFSL 160 FS + H++ PII + IG V ++ S + I+ SL Sbjct: 181 VAARFSTGFATIGESSHYIGLLPIIS--TETKKPIGAVAVSIGGSDALYGAQRKLIYNSL 238 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRF 220 A L + + + + RH ++ + + + +ER E Sbjct: 239 AALIVVLTVTGVLVTVIARHF----LKPVPALVQATLRIAREETDVVTPFQERRDEIGDM 294 Query: 221 ALDFNSLLDEMEEWQLRLQAKN--AQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDAR 277 A +L + + E Q ++ QL A HD LTGL NR + T + + S + Sbjct: 295 ATAIETLREAVLERGRLRQIRDMAQQLEHMAHHDALTGLPNRVLLMKTLETRLEHLSASG 354 Query: 278 KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVL-Y 336 + ++ LD D FK +NDT GHA GD +L+ +A R++ G RLGGDEFA++ Sbjct: 355 QPFNVMLLDLDRFKAVNDTLGHAAGDALLVAVASRISAVLGENDMVSRLGGDEFAIIQST 414 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNM 395 + ES+ + + + + F L G ++ SIG A H + A +L + AD + Sbjct: 415 NADCESDAAMLAARVVHAVSRSFSL-EGSTISIDTSIGIACAPVHGTSATQLLQHADLGL 473 Query: 396 YQAKHQRAEKLV 407 Y+AK V Sbjct: 474 YRAKSMGCGYFV 485 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 3/162 (1%) Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGD 303 + + A +D LTGLANR + ++ + + +T A++FLD D+FK INDT GH+ GD Sbjct: 360 IEKLAYYDSLTGLANRTLLKDRMHKAIQYAKREQTNLAVMFLDLDHFKLINDTLGHSVGD 419 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +LI IA+ L RLGGDEF ++L V+S + Q I S + D+ + Sbjct: 420 DMLIHIAEILKIHIRESDTLSRLGGDEFVILLPSVKSIFDAQNIASKIQHTLQSKHDIGD 479 Query: 364 GHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 HQ +T SIG ++ +H +E+L AD MY+AK+ Sbjct: 480 -HQLYITSSIGVSLYPDHGDNSEELIRNADTAMYEAKNSGRN 520 >UniRef50_C6N668 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N668_9GAMM Length = 815 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGD 288 ++E+ R+ + ++ + A HD LTGL NR +N + ++ AL+F+D D Sbjct: 636 QVEDINERIINRE-KIYQLAYHDILTGLPNRQLLLDRLNQAIASAKHHHRFMALMFVDLD 694 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK++NDT GH GD++L E++ RL + R GGDEF ++L ++ S + + Sbjct: 695 KFKHVNDTLGHDAGDKLLKEMSTRLCCSVRSQDTIARTGGDEFVIILTEISSPQDAAILA 754 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 +I P L + Q +T SIG A+ + A +L + AD MY +K ++ Sbjct: 755 DKFLKIVKKPLSLQD-QQLQITASIGIAIYPNNGLDAAELMKKADMAMYMSKDAGRDR 811 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 96/234 (41%), Gaps = 11/234 (4%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 L L++ V+ + R AE + E Sbjct: 707 VFGSRPAAWLGTPLRSRGKVIGAMVVQHYEDSEFFSARDAELMVP-------VAEQVAVA 759 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSALLFLDGDNFKYI 293 + + L ALHDPLTGL NRA I + A+L LD D FK+I Sbjct: 760 IERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDLDRFKFI 819 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND+ GH TGD +L+E+A+R+ RLGGDEFA++L DV S + QI L Sbjct: 820 NDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLA 879 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAEKL 406 P + + SIG + T + +A+ L AD MYQAK Q + Sbjct: 880 ALERPVRMG-AKVVRTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGRF 932 >UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K923_AZOSB Length = 1255 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 3/169 (1%) Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 ++ + QL A +DPLTGL NR+ + + + ++ A+ +LD D FK +ND Sbjct: 1058 VKRQQEQLEHLAHYDPLTGLPNRSLLADRLQLALAQARREESAVAVCYLDLDGFKAVNDE 1117 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L+EI +RL + RLGGDEF ++L DV + E Q S + Sbjct: 1118 LGHQAGDLLLVEIGRRLKDCVRAGDTVARLGGDEFVLLLLDVAGQEECIQAVSRVLAAIA 1177 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAE 404 P + G +++ SIG A+ + E L AD MY AK + Sbjct: 1178 RPVTIA-GEYRSVSASIGIALFPDDDDEPEVLLRHADQAMYLAKQRGKN 1225 >UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=B4B6I0_9CHRO Length = 459 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 87/393 (22%), Positives = 143/393 (36%), Gaps = 17/393 (4%) Query: 21 ISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETL 80 I + S+ L V + LT K NL + + A++ + + Sbjct: 65 IPLLSVLGMATGSSLGAIVGAYLTKKGNFHNNLDRIEDVFSLIVRGAII-------SPVI 117 Query: 81 AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTF--SNFISHWLFPAPIIQPIRHNGE 138 ++L V Q L + + D + W+ P + Sbjct: 118 SSLIDVPSLFLGGVIPPNQLSLFWFQFCMGDALGVLVITPVCLTWISPIKWTYKQKIEAF 177 Query: 139 TIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHD 198 + L + ++ +L I+ + L + + ++ Sbjct: 178 IFFLLLLLISGIVFNGWLIKEQDLLPAFIIYPFLVLAPL--RFGSKGAATALLLVSIMAL 235 Query: 199 VRSNRNFSRRVSEERIAEFHRFALDFNSLLDE---MEEWQLRLQAKNAQLLRTALHDPLT 255 + + V+ + L N + +L L + AL+D LT Sbjct: 236 LGLVHDTGPFVASSPLKTLVLLWLFVNVAAVVGLVLAASISQLIQAKQHLEQMALYDSLT 295 Query: 256 GLANRAAFRSGINTLMNNSDARKTSAL-LFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 GL NR I + + + A+ L+LD D FK INDT GH GD+VLIE+AKRL Sbjct: 296 GLDNRILLTDKITAALARAKRYQNYAVVLYLDLDGFKLINDTMGHDMGDQVLIEVAKRLK 355 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 R+GGDEF ++L DV +++ + QI + P LHN Q + +SIG Sbjct: 356 MCVRQTDAVARIGGDEFVVLLQDVNHIQGAERVAQEIIQIISRPIQLHN-KQMHIGVSIG 414 Query: 375 YAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 A+ + + +L ADH MY AK Sbjct: 415 VAVAPGNGTNLNQLLRNADHAMYHAKQSGKNTY 447 >UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E8F7_GEOLS Length = 461 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 2/179 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 ++E + +L + A D LTGL NR F ++ + + + ALLF+D D Sbjct: 268 VKENITERKELRDRLEQMAQFDMLTGLPNRRMFLDRLSQTVAIAQRTEQRFALLFVDLDG 327 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK IND++GH GDRVL +A RLA + R+GGDEF ++L + + Q+ Sbjct: 328 FKRINDSYGHEAGDRVLKTVAARLAACIRMSDTVGRMGGDEFTIILSTLAHYEDAGQVAD 387 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + + P L +G Q T+ SIG ++ E A + L AD MY+ K Sbjct: 388 KILDALSRPITLPDGQQDTVGSSIGISVFPEDAQDGDGLLATADDAMYKVKRNGKNSYC 446 >UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5T0_9GAMM Length = 1410 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 3/169 (1%) Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTW 297 + + L A +D LT L NR F + + +S + A++FLD D FK +ND + Sbjct: 846 KEQQHALELMAHYDMLTQLPNRTLFADRFHQAIAHSKRNHSLLAVVFLDLDGFKPVNDRY 905 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD++LIE+A+R+ A RLGGDEF ++L D+ S +++ + + L Sbjct: 906 GHDVGDQLLIEVAQRIKASIRQDDTASRLGGDEFVLLLNDISSVDHCERLINRIRHAIEL 965 Query: 358 PFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEK 405 P+ L + +++ S+G + + A A+ L AD MYQAK ++ Sbjct: 966 PYQL-DEDTISLSASLGITIYPLDDADADTLLRHADQAMYQAKLAGRQR 1013 >UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXR7_HALHL Length = 749 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 8/212 (3%) Query: 197 HDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTG 256 H + + ++ RI + F ++ ++ +L+ +++ A HDPLTG Sbjct: 269 HRRKGGELYPEWLTINRIDDATGQPQHFVAVFSDIT----QLKDAHSRSEYLANHDPLTG 324 Query: 257 LANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAE 315 L NR+ F+ + + + L+FLD D+FK INDT GH GD +L+++A+RL E Sbjct: 325 LPNRSLFQDRLQQAIAQTQRHEGQVGLMFLDLDHFKTINDTLGHEVGDELLVQVAERLGE 384 Query: 316 FGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGY 375 R+GGDEF +VL D EV I L + F + +G + T S G Sbjct: 385 LVRDVDTVARIGGDEFTVVLTDC-DPEEVGSIAQRLVEGLGGTFVV-DGRELQATPSAGL 442 Query: 376 AMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 A+ L + AD MY+AK +L Sbjct: 443 ALYPRDGEDVHTLCKAADMAMYRAKEDGRNRL 474 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 13/229 (5%) Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE---------MEEWQLRLQ 239 R R++ +R + N ++DE + + Sbjct: 215 FAYAIQHAFSTRKEYMVECRINTQRNDVIWTESK-INPIMDEEGNVTKLLLITRDVTDRK 273 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWG 298 + A HD LT L NR + ++ M + + + A+LFLD D FK +ND++G Sbjct: 274 QSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFG 333 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD +LIE +KRL RLGGDEF ++ + +E ++ + P Sbjct: 334 HDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRP 393 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 F+L +GH ++ SIG A+ + E L + AD +Y K + Sbjct: 394 FEL-DGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGY 441 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 9/217 (4%) Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDP 253 RS R++ ++S IA L + ++ E + Q ++ A HD Sbjct: 522 SAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQ----KMSYLAHHDG 577 Query: 254 LTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGL NR F+ ++ + + A++F+D D+FK++ND+ GHA GD +L +A+R Sbjct: 578 LTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQR 637 Query: 313 LAEFGGLRHKAYRLGGDEFAMVLYDVQSES--EVQQICSALTQIFNLPFDLHNGHQTTMT 370 L RLGGDEF ++L D+ V ++ + + P L G + + Sbjct: 638 LTGALRASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLG-GTEVNVG 696 Query: 371 LSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 S+G A+ + L + AD MY++K + + Sbjct: 697 ASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRY 733 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria... 436 e-121 UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepI... 428 e-118 UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP... 426 e-118 UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria R... 413 e-114 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 402 e-110 UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupri... 400 e-110 UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteob... 398 e-109 UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=ma... 392 e-107 UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepaci... 390 e-107 UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans ... 376 e-103 UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 376 e-103 UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acineto... 371 e-101 UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 371 e-101 UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 367 e-100 UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 366 e-100 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 363 6e-99 UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 359 1e-97 UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alasken... 340 4e-92 UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extra... 336 7e-91 UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepI... 335 1e-90 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 334 4e-90 UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 329 8e-89 UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 328 2e-88 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 324 3e-87 UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 322 2e-86 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 319 2e-85 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 316 9e-85 UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 315 2e-84 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 314 3e-84 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 314 4e-84 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 312 2e-83 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 311 3e-83 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 310 5e-83 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 310 7e-83 UniRef50_B3E9B7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ge... 310 8e-83 UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax... 309 1e-82 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 309 2e-82 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 309 2e-82 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 309 2e-82 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 308 2e-82 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 308 3e-82 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 308 3e-82 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 308 3e-82 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 307 4e-82 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 307 5e-82 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 307 5e-82 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 307 5e-82 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 307 5e-82 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 306 7e-82 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 306 9e-82 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 306 9e-82 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 306 1e-81 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 305 1e-81 UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax... 305 2e-81 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 305 2e-81 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 304 3e-81 UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 304 4e-81 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 303 9e-81 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 1e-80 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 302 1e-80 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 302 1e-80 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 1e-80 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 302 2e-80 UniRef50_Q2LY94 Sensory box ggdef family protein n=1 Tax=Syntrop... 302 2e-80 UniRef50_Q15NC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 301 3e-80 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 301 3e-80 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 300 5e-80 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 6e-80 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 300 7e-80 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 300 8e-80 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 300 8e-80 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 299 9e-80 UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors... 299 1e-79 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 299 1e-79 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 299 1e-79 UniRef50_UPI0001699903 diguanylate cyclase/phosphodiesterase wit... 299 2e-79 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 299 2e-79 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 299 2e-79 UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 298 2e-79 UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1... 298 2e-79 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 2e-79 UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=... 298 2e-79 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 3e-79 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 297 4e-79 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 4e-79 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 4e-79 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 6e-79 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 297 7e-79 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 297 7e-79 UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 297 7e-79 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 9e-79 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 9e-79 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 2e-78 UniRef50_C7RS23 Response regulator receiver modulated diguanylat... 295 2e-78 UniRef50_Q0EY23 Sensory box/GGDEF family protein n=1 Tax=Maripro... 295 3e-78 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 295 3e-78 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 3e-78 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 3e-78 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 3e-78 UniRef50_C5V4E4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 294 4e-78 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 4e-78 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 5e-78 UniRef50_Q0EYI6 Sensory box-containing diguanylate cyclase, puta... 293 6e-78 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 7e-78 UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 293 7e-78 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 293 9e-78 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 293 9e-78 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 9e-78 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 293 9e-78 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 1e-77 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 292 1e-77 UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 292 1e-77 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 292 1e-77 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 292 2e-77 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 292 2e-77 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 292 2e-77 UniRef50_P72843 Regulatory components of sensory transduction sy... 291 2e-77 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 291 2e-77 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 291 3e-77 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 291 4e-77 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 291 4e-77 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 291 4e-77 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 4e-77 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 4e-77 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 4e-77 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 5e-77 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 290 5e-77 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 290 7e-77 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 7e-77 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 290 8e-77 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 290 8e-77 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 8e-77 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 9e-77 UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 9e-77 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 289 1e-76 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 289 2e-76 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 289 2e-76 UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 2e-76 UniRef50_Q2W736 Response regulator containing a CheY-like receiv... 288 2e-76 UniRef50_C5V5L2 Response regulator receiver modulated diguanylat... 288 2e-76 UniRef50_A0L7S5 Response regulator receiver modulated diguanylat... 288 2e-76 UniRef50_Q2W523 FOG: PAS/PAC domain n=5 Tax=Magnetospirillum Rep... 288 2e-76 UniRef50_B7VQL7 GGDEF family protein n=2 Tax=Vibrio RepID=B7VQL7... 288 3e-76 UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 288 3e-76 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 4e-76 UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=... 287 4e-76 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 5e-76 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 6e-76 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 287 6e-76 UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella ma... 287 6e-76 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 287 6e-76 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 287 6e-76 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 287 6e-76 UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL d... 287 7e-76 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 7e-76 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 286 9e-76 UniRef50_B8HMI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 286 9e-76 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 286 9e-76 UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 T... 286 1e-75 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 286 1e-75 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 286 1e-75 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 285 2e-75 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 285 2e-75 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 285 2e-75 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 285 2e-75 UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors... 285 2e-75 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 285 2e-75 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 285 2e-75 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 285 2e-75 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 285 2e-75 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 285 2e-75 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 285 2e-75 UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 285 3e-75 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 285 3e-75 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 285 3e-75 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 284 3e-75 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 284 3e-75 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 284 4e-75 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 284 4e-75 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 284 4e-75 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 284 5e-75 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 284 5e-75 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 284 5e-75 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 284 5e-75 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 5e-75 UniRef50_UPI0001698C53 response regulator receiver modulated dig... 283 6e-75 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 283 6e-75 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 7e-75 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 283 8e-75 UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors... 283 8e-75 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 8e-75 UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 283 8e-75 UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 9e-75 UniRef50_A8FVX9 Signal transduction protein containing a membran... 283 9e-75 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 282 1e-74 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 282 1e-74 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 282 1e-74 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 1e-74 UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 1e-74 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 282 2e-74 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 282 2e-74 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 282 2e-74 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 2e-74 UniRef50_A3JAE8 Predicted signal transduction protein containing... 282 2e-74 UniRef50_A1ATR3 Response regulator receiver modulated diguanylat... 282 2e-74 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 2e-74 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 282 2e-74 UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 ... 282 2e-74 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 282 2e-74 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 281 3e-74 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 281 3e-74 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 281 3e-74 UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 281 3e-74 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 281 3e-74 UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL d... 281 3e-74 UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodi... 281 3e-74 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 281 3e-74 UniRef50_Q3A5N0 Sensory box/GGDEF family protein n=1 Tax=Pelobac... 281 4e-74 UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thioo... 281 4e-74 UniRef50_Q21VJ9 Response regulator receiver modulated diguanylat... 281 4e-74 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 281 4e-74 UniRef50_B3E6U2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 280 4e-74 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 280 5e-74 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 280 5e-74 UniRef50_Q8YXJ4 All1219 protein n=4 Tax=Nostocaceae RepID=Q8YXJ4... 280 5e-74 UniRef50_C7LQB7 Diguanylate cyclase/phosphodiesterase n=2 Tax=De... 280 6e-74 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 280 6e-74 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 280 6e-74 UniRef50_C5V7W9 Diguanylate cyclase n=1 Tax=Gallionella ferrugin... 280 7e-74 UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 280 7e-74 Sequences not found previously or not previously below threshold: UniRef50_C6WYT7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 304 6e-81 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 290 6e-77 UniRef50_C5V740 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 289 1e-76 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 288 3e-76 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 6e-75 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 1e-74 UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylo... 282 1e-74 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 282 2e-74 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 281 3e-74 >UniRef50_B1JL26 Diguanylate cyclase n=43 Tax=Gammaproteobacteria RepID=B1JL26_YERPY Length = 436 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 145/404 (35%), Positives = 224/404 (55%), Gaps = 1/404 (0%) Query: 3 DNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTY 62 N NS K PT LR I ++ ++++ + L+V ++ L+ Y NL L A ++Y Sbjct: 16 KNHNSAEKLPTLAGVLRRIHLSVAIVSVVTACIFLTVAALFALRVYVDHNLHLIARAISY 75 Query: 63 SLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISH 122 + EAAVVF D A E LA + + + A++ DK +A W P ++ Sbjct: 76 TTEAAVVFGDNVEANELLALIASNEEVAEAKIIDKHNRQIAYWALPDDGPIHHMEQIVAR 135 Query: 123 WLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 W+ PAP++ P+ H G+ IG++ + S+ F+ LA + C+ +++ +A+ L+R + Sbjct: 136 WILPAPVVLPMFHAGDEIGKIVIVGHGGSLLRFLLQGLAGMLACLTVSTLVALFLSRRML 195 Query: 183 NGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKN 242 G+V +LK IT+V H+V +R+F +RV ++AE + + DFN LL+E+E WQ L +N Sbjct: 196 LGIVGSLKRITEVAHNVSRHRSFGQRVPSAKVAELNELSNDFNGLLEELEVWQKHLTQEN 255 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATG 302 L A HD LTGLANR F ++ +N+ + +A+LFLDGD+FK +ND +GHA G Sbjct: 256 DSLAYRAAHDSLTGLANRTFFEGRLSRTLNDCQPGEHTAVLFLDGDHFKDVNDNYGHAAG 315 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D VL IA R+ RLGGDEFA++L + + +V I + LP L Sbjct: 316 DLVLTTIAVRIRALLRETDLVARLGGDEFAVLLTPIHNLDDVLTIADHIIDSMALPIILA 375 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 G + T++LSIG A+ +HA + EKL + AD MYQAK Sbjct: 376 EGCEITVSLSIGIAVYPDHAQTPEKLLQRADEAMYQAKKNFRSG 419 >UniRef50_Q88DZ8 GGDEF domain protein n=6 Tax=Proteobacteria RepID=Q88DZ8_PSEPK Length = 423 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 139/407 (34%), Positives = 208/407 (51%), Gaps = 2/407 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M RPT + L ++ + + L + L++ VL L+ YA NL L A ++ Sbjct: 1 MKPTRKRTVRPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSIN 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 Y++EAAVVF D AA E+LA + + + A+V + + LA W ++ Sbjct: 61 YTVEAAVVFDDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVA 120 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 L P+I PI H + +G + L + S+ F+ LA + C +L++ A L+R L Sbjct: 121 SALLDEPVILPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRL 180 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 + + L+ + V H R R+F RRV E IAE + DFN+LLDE+E W LQ++ Sbjct: 181 LSDITRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQSE 240 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHA 300 N L A HD LTGL NRA F ++ + N+ ++ A+LFLD D+FK INDT GHA Sbjct: 241 NQTLAHQASHDSLTGLPNRAFFEGRLSRSVRNAARQQDHLAVLFLDSDHFKQINDTLGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD VLI +A+R+ + RLGGDEFA++L + + + + I + LP Sbjct: 301 VGDEVLISVAERVRAQLREQDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMELPVQ 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L +G + +LS+G A + L AD MYQAK +R Sbjct: 361 LDSGRSVSTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRERRGHW 407 >UniRef50_C6X923 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X923_METSD Length = 409 Score = 426 bits (1095), Expect = e-118, Method: Composition-based stats. Identities = 122/405 (30%), Positives = 206/405 (50%), Gaps = 2/405 (0%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 + P + LR ++ I ++ L L++ + L+ YA +N+ L A +++Y+ Sbjct: 1 MTTPRSPLPRLDQVLRRAHLSVALIAVISSGLALTLAGMYALQAYATQNMQLVARSLSYT 60 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 +EAAV+F D A E L +G++ + V + LA+W +++++ Sbjct: 61 VEAAVLFNDELAVQEALDKVGKREDVAEIRVIGRHGIPLANWKRPETGAFFHLESWLANI 120 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 + P P P+ H+ TIG +RL + ++ ++ + C+ ++ +A+ L+R +H Sbjct: 121 VMPEPYYYPVTHDNMTIGRIRLVPHSRLLLEYMVTGISCVFACMAFSTLLALALSRRMHA 180 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 G+ L + D H VR R+F R IAE ++ DFN+L+DE+ WQ ++ ++ Sbjct: 181 GISGPLNILADTAHRVRQYRSFGLRAPAANIAELNQLNQDFNALMDELATWQRHVKREHD 240 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATG 302 L A HD LTGL NR+ S + + ++ AL+F+DGD+FK INDT+GHA G Sbjct: 241 TLAYRANHDSLTGLCNRSLLESELEHAVRDARFHSNAVALMFMDGDHFKEINDTYGHAAG 300 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D VL +A R++ RLGGDEFA +L ++ + I + P L Sbjct: 301 DEVLKIMALRISGQLRESDIVARLGGDEFAALLKPIKHAEDAVHIAEKIAHQMQSPITLP 360 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 NG T +++IG A+ +HA +A++L AD MY+AK Q Sbjct: 361 NGELITCSVTIGIALYPDHARTAQELLAAADEAMYRAKDQERGSW 405 >UniRef50_P46139 Inner membrane protein yfiN n=114 Tax=Bacteria RepID=YFIN_ECOLI Length = 408 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 408/408 (100%), Positives = 408/408 (100%) Query: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM Sbjct: 1 MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATM 60 Query: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI Sbjct: 61 TYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFI 120 Query: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH Sbjct: 121 SHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA Sbjct: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA Sbjct: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD Sbjct: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR Sbjct: 361 LHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR 408 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 26/422 (6%) Query: 10 KRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVV 69 + KR L I M +++ + + + +++L A + + +A+V Sbjct: 10 RNLPLKRKLMLIIMLCCCASLLAASIFFLTRDAKGVYRVQREDLVSLAEIIGANSASALV 69 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKD----PGDTFSNFISHWLF 125 F D +A T+A L + V + I+A P + S Sbjct: 70 FDDPESAQRTIAPLASKRSILAVYVLTSEGQIMARHVAPEAGNAELPLERLGASPSPAAV 129 Query: 126 PAPI-------------------IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGC 166 A + +QP+ + E +G V + A + ++ V Sbjct: 130 LAAVETIRKTAEKKSAVPGFDCLVQPVYFDYERVGTVVIHADTELFRKNLRWTATVTLLF 189 Query: 167 ILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNS 226 +L+ A + L + L ++ + DV +++N++ RV++ E FN Sbjct: 190 MLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAKPSDDEIGLLYDGFNE 249 Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFL 285 +L E+EE L+ + A L + A +DPLT L NR F + +N ++ + +++F+ Sbjct: 250 MLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFI 309 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D+FK INDT GH TGD +LI++A RL+ RLGGDEF + +V + Sbjct: 310 DLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAA 369 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + + L +F PF L + +T SIG + + ++L AD MY AK Sbjct: 370 IVAAKLNALFAKPFQLGES-EIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGKN 428 Query: 405 KL 406 Sbjct: 429 VY 430 >UniRef50_Q1LL52 Diguanylate cyclase (GGDEF domain) n=2 Tax=Cupriavidus RepID=Q1LL52_RALME Length = 426 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 133/400 (33%), Positives = 203/400 (50%), Gaps = 2/400 (0%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 D+++ +RPT RALR I + I + + + L+ + L+ YA NL L A ++ Y+ Sbjct: 10 RDDAVPQRPTLYRALRRIHLGVALIAVFTVGISLTALGLTALRVYADHNLRLVARSIAYT 69 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 +EA VVF D AA + L+ + + V D+ + W + Sbjct: 70 VEAPVVFGDAAAAADALSVIAASEDVTRVIVYDRDHQPMTVWQRPGHEQFPALRRVAGDL 129 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 L + QPI H + +G VR+ ++ HF+ L C+LL + +A ++R + Sbjct: 130 LISGAVEQPILHEAQQVGSVRVAGDPVALLHFLLQGTLGLGACLLLTALVAHYMSRRMLR 189 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 +V L+N+ V H VRS R F +R+ RI E + + DFN LLDE+E WQ +LQ +N Sbjct: 190 DVVNPLRNLMRVAHAVRSERAFGQRMPPARIEELNALSEDFNVLLDELEAWQNQLQHENR 249 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATG 302 L A HD LTGL NRAAF ++ + + + +A+L+LD D+FK IND +GHA G Sbjct: 250 SLAHRASHDSLTGLLNRAAFTEALDLAVRTAAARNQYAAVLYLDSDDFKGINDRYGHAAG 309 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D VL+ + +RL RLGGDEFA+++ +++ + +I + P L Sbjct: 310 DAVLVAVGQRLRGCLREGDSVARLGGDEFAVLVNALRAPEDAVRIAEHILNAMATPVCLA 369 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 +G LSIG A+ HA + L AD MY AK Q Sbjct: 370 DGTTIFAPLSIGLAVYPLHARNGTALLHSADAAMYGAKRQ 409 >UniRef50_A0KJG8 Inner membrane protein YfiN n=5 Tax=Gammaproteobacteria RepID=A0KJG8_AERHH Length = 422 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 139/397 (35%), Positives = 205/397 (51%), Gaps = 2/397 (0%) Query: 9 NKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV 68 N+R T +++L + + + + +LL+ ++L L+ YA NL L A ++Y+ EAAV Sbjct: 9 NQRLTLRQSLGRTHLVTSLTAVCMAGVLLTGIALLALRLYADHNLELVARAISYTSEAAV 68 Query: 69 VFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAP 128 VF D AA E L A+ + A + +LASW P +++ + P P Sbjct: 69 VFHDEEAAREALQAITTHEDVARASIYLPSGQLLASWSRAMSTPWSGLEQYLARLILPGP 128 Query: 129 IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA 188 + QP+ G I + L + F+ +L + C++L++ A+ + R + N L Sbjct: 129 VDQPMLRGGVEIARIHLVGHGQYLLLFLLQTLLAMLLCLVLSTLGALYVARRMQNSLTAP 188 Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 LK++ V H V R + RV E IAE H DFNSLLDE+E WQ + +NA LL Sbjct: 189 LKDLAQVAHSVSRQRILAMRVPEANIAELHALGQDFNSLLDELEAWQAHQRRENASLLHQ 248 Query: 249 ALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLI 307 A HD LTGL NRA F + ++ + + ALL+LD D FK INDT GHA GD VLI Sbjct: 249 ATHDALTGLPNRALFEARLDQAVTTGRLHDERFALLYLDCDRFKQINDTLGHAAGDDVLI 308 Query: 308 EIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +A+R+ RLGGDEFA++L + E + + + + Q P L +G Q Sbjct: 309 ALARRVQHQLRPMDLVCRLGGDEFAILLTPLSQVGEAEDVVARIQQAMADPVVLGDGSQL 368 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRA 403 +SIG A+ + +A L + ADH MYQAK R Sbjct: 369 LAAVSIGIALYPDQGLTAADLLQQADHAMYQAKRLRR 405 >UniRef50_A0YD55 Predicted signal transduction protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YD55_9GAMM Length = 669 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 100/408 (24%), Positives = 180/408 (44%), Gaps = 14/408 (3%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 N + F + L + +I +++ LL S + + ++ ++ + S Sbjct: 2 NPLQKKRNGFFYKQLIAVVGINILTLLIMAGLLYSSF-ITAYEDNLKEVMSSKIRLLAAS 60 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 +A+VF D +A L++L + ++ D + + A + + +F S Sbjct: 61 STSALVFDDRESAVTLLSSLKEHTATRYVQIYDADRQLFAEYRRPGQLVDVDIDDFESDA 120 Query: 124 LFPAP---IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRH 180 F + QPI N E +G + ++A +S++ + + + + ++ +A L Sbjct: 121 FFKNKNIYMSQPILMNSEYLGVIVISADTNSLNEQKNHYILIASAVLFISLLLAYLLNWQ 180 Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 L L + + +V V N+ + RR++ R E L N++LD +E A Sbjct: 181 LQKRLTAPISELMKLVGYVAKNKKYHRRLNNARDDEIGDLTLGVNTMLDTIE-------A 233 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGH 299 QL + A +D LT L NR + +N + KT ALLFLD D FK IND+ GH Sbjct: 234 HETQLFQRANYDELTQLPNRHLLMERLAHGINTATRNKTEIALLFLDLDRFKVINDSLGH 293 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD +L+++A +L R GGDEF M+L ++++ ++ I + + P Sbjct: 294 RVGDELLVQVAGKLVRTLRKSDSISRWGGDEFVMLLENIKNVKDINNIVEKIVEELAKP- 352 Query: 360 DLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 + GH ++ SIG A + L + AD +MY+AK + K Sbjct: 353 TMTGGHLLHVSTSIGIARFPQDGDDSLSLLKHADISMYRAKAKGPGKF 400 >UniRef50_B1YZK2 Diguanylate cyclase n=12 Tax=Burkholderia cepacia complex RepID=B1YZK2_BURA4 Length = 422 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 131/404 (32%), Positives = 201/404 (49%), Gaps = 2/404 (0%) Query: 5 DNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSL 64 +S RPT + LR + F+ + + + L V +V+ L+ YA NL L A ++ Y++ Sbjct: 9 SSSRVPRPTLQSVLRRAHLRLAFVAVAMAAVSLIVVAVIALRAYAGNNLNLLARSLGYTV 68 Query: 65 EAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL 124 EAA+VF D AA E +A + + V + + + A+W + ++ Sbjct: 69 EAALVFGDRVAANEAIATIANDEDVAQVVVTNARGQLFATWKLPAEGRIARIERGVADLA 128 Query: 125 FPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNG 184 P P+ P+ H+G +G+V + R F+ + + GC++++ A ++ L Sbjct: 129 LPGPVTIPVMHDGIVVGQVIVRGRGHQFFGFLLGGIGGILGCLVVSVLGAYVSSKRLLRN 188 Query: 185 LVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 +V L+ + V H VR R F RRV IAE ++ DFN+LLDE E+WQ L+ +NA Sbjct: 189 IVAPLRALAGVAHAVRRERAFGRRVEPAAIAELNQLGDDFNALLDEFEDWQNTLRDENAS 248 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGD 303 L A HD LTGL NRA F S ++ + ++ + A+L+LD D FK IND GH GD Sbjct: 249 LEHKATHDALTGLPNRAQFESRLSVALCDAVVTGQRVAILYLDCDRFKEINDCLGHDAGD 308 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 VL+ +A RL RLGGDEFA++L V+ V +I + +L + Sbjct: 309 AVLVGVAGRLRTQVRETDLVARLGGDEFAVMLGTVREVESVCRIADEILSGMVPSIELPD 368 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 G +S G A+ +HA A L AD MY+AK R Sbjct: 369 GRMVATMMSAGVALYPDHASDANGLLRAADAAMYRAKRTRPGTW 412 >UniRef50_A9BW99 Diguanylate cyclase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW99_DELAS Length = 409 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 117/396 (29%), Positives = 187/396 (47%), Gaps = 2/396 (0%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 SL+ + + +R + + + L LL + V TL+ Y NL L A ++ Y++EA Sbjct: 4 SLSGNASLRNVIRRAHLRMAAVAIALAGALLLIVGVATLRLYLSNNLHLVARSLAYTVEA 63 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 ++VF D A L L + + AEV D + W + ++ + Sbjct: 64 SLVFGDRDEAARVLDQLLRGEGVAHAEVFDAEGRPFVRWSGHGGSALSSIGELLAVGIGL 123 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 +R +G +G V+L + + F+ VL C+ ++ + + +R + + Sbjct: 124 PRAEADVRQDGRLVGSVQLASDGVGLVRFLGAGFIVLVLCVGVSGYVGLRQSRRMLRDIA 183 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 E L+ + V VR +R+ +RV RIAE +FN+LL E++ RLQ +N+ L Sbjct: 184 EPLQQLARVARAVRHDRSMDQRVPLARIAELRELGDNFNALLAELQTRHERLQQQNSALE 243 Query: 247 RTALHDPLTGLANRAAFRSGINTLM-NNSDARKTSALLFLDGDNFKYINDTWGHATGDRV 305 R A D LTGLANR F + + + +++ + A+LFLD D FK +ND +GHA GD + Sbjct: 244 RQASRDSLTGLANRLHFEQRLQQALDSAAESGQKLAVLFLDNDRFKQVNDAYGHAVGDVL 303 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L + RL RLGGDEFA++LY V + Q + + P + G Sbjct: 304 LKAVGARLRSQVRETDLVARLGGDEFAILLYPVGGGGDAQMVRDKIEAAMREPLVVSEGV 363 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKH 400 ++S G A+ +H S E L AD MYQAK Sbjct: 364 VLQPSVSAGVALFPKHGQSMETLMRHADQAMYQAKA 399 >UniRef50_C6CBF5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBF5_DICDC Length = 423 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 178/397 (44%), Positives = 255/397 (64%) Query: 4 NDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYS 63 N TF++AL I+M + ITM++ W+L++ S+ + KQYA KNL L A T++ + Sbjct: 10 NTPHCAGNATFRQALTRINMLVVIITMVVSWMLITAASLFSFKQYADKNLQLLAYTLSRN 69 Query: 64 LEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHW 123 +EAAVVF DG AA E LA+LGQQ QF A + D + N+L +W ++ FS F S W Sbjct: 70 VEAAVVFRDGTAANEMLASLGQQEQFRRAVLSDAKGNVLTNWRAAEQEEPGWFSLFTSRW 129 Query: 124 LFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 LF + Q I H G+ +G + + D++I F+ FSL LT CILLAS +AI ++ LH Sbjct: 130 LFRGSVKQSIYHRGQLVGYLEIAGTDTTIRQFVSFSLLSLTLCILLASILAIFISHRLHR 189 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 GL++AL NI +VVHD+R+NR+FSRR+ + +IAE F D NSLLDE+E WQ +++ +N Sbjct: 190 GLIQALHNIAEVVHDIRNNRHFSRRIPKVKIAELDSFGHDLNSLLDEIESWQQQMRKEND 249 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGD 303 LL +L DPLTGLANR AF + ++ + + ++ALLF+DG++FK+INDT+GHA GD Sbjct: 250 SLLERSLRDPLTGLANRTAFLGALGNILADRHHQTSAALLFMDGNSFKHINDTYGHAAGD 309 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +VLI IA RLA + + A RLGGDEFA++L D+ S+V+++ ++ Q P L Sbjct: 310 QVLIAIANRLARYSRKQDLAARLGGDEFALILADIHDVSDVERVADSIRQAMQEPIPLDE 369 Query: 364 GHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKH 400 + +++LSIG AMT + E L AD MY K Sbjct: 370 SLKVSISLSIGIAMTEPEMTPEALMAQADKAMYLDKQ 406 >UniRef50_D0SHB3 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHB3_ACIJO Length = 412 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 3/394 (0%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 + + ++ + +T+ + L+ V S+ T+ YA+++L + +AT++ ++ Sbjct: 3 RKSSNTSLQKIFSQSQLLIFALTLGICSLIFVVISIYTMNTYAKQSLNIFSATLSEQIQP 62 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 AV+F D +TL QQ +V + Q LA + + N F Sbjct: 63 AVIFNDSITLQQTLNNHIQQYPIRAIQVINLQGKPLAEAYKPTPE-FAWMENLFDKVFFK 121 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 P+ + I+H G + + + + F + L L+ I + I + L + L+ Sbjct: 122 HPVTRTIKHQNNQYGTLIIYGSATQLMSFFFQLLICLSAGIFVILLIMLWLVHSTYQKLM 181 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 +++ + + V + + + R+ I EF + FN+LLD+++ +LQ++N+QL Sbjct: 182 HSIQPMVNTVESLNLDTQYQARLPSSPIYEFRVISGAFNNLLDKVQRTNEKLQSENSQLS 241 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 ALHD LT L NR F + + + + +T AL F+D +NFK IND +GH GD VL Sbjct: 242 HQALHDQLTELPNRHYFYNILFNQFEHPEKNQT-ALFFIDNNNFKNINDVYGHLAGDAVL 300 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 E+A+RL + RLGGDEFA++L +++ ++ IC L + P + HQ Sbjct: 301 KEMAQRLKKNVRSHDVVARLGGDEFAILLRNIKHYDHLELICEHLIECSKAPLYF-DQHQ 359 Query: 367 TTMTLSIGYAMTIEHASAEKLQELADHNMYQAKH 400 + SIG A + + E L AD+ MY+AK+ Sbjct: 360 IHFSFSIGVAFSKCATTPEDLIAEADNAMYKAKN 393 >UniRef50_Q15WC9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WC9_PSEA6 Length = 703 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 102/417 (24%), Positives = 179/417 (42%), Gaps = 18/417 (4%) Query: 6 NSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLE 65 + L + F++ L I T++ I + +L+ S V + K + A+ ++ + Sbjct: 4 SKLRRASFFQKQLMAIIGTNLLILAIAAFLIYSAF-VDDYRDNLVKTMDSNASLLSAASR 62 Query: 66 AAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLF 125 +A++F D A LA+L + A++ D ++ A++ + F Sbjct: 63 SALLFHDEHAGQTILASLAKIPAMRFAQLLDSEKKRFATYTRDDASWDVMLDDIKPGHFF 122 Query: 126 PAP---IIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 + Q I + +G + L+A S+ ++ L S +A L + Sbjct: 123 TNDNLYLTQDITLGEDVLGYIVLSADTHSLQAQQRRYGRIVLWVFALGSLLAYLLNWRMQ 182 Query: 183 NGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKN 242 L +K + +V V + +R+ R + R NS+LD +EE Q +L + Sbjct: 183 KRLQSPVKRLIHLVDYVAKEGRYDQRIFNRRQDDIGRLVNGINSMLDTIEEHQSKLSEHH 242 Query: 243 A-----------QLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNF 290 QL A D LT L NR + I+ + + + AL+FLD D F Sbjct: 243 EHLEGLVELRTEQLYERANFDALTQLPNRHSLTEKISQAIEIARERKTNLALMFLDLDRF 302 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K IND+ GH GD++LIE+AK++ R GGDEF +++ + + S V + Sbjct: 303 KVINDSLGHFMGDKLLIEVAKKIQHKLSDSDVVGRWGGDEFVVLIQNPKELSSVDSLAKE 362 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +LP + +GHQ ++ SIG A + A L + AD +MY+AK + Sbjct: 363 IIASLSLPL-IVSGHQLHISTSIGIACFPDDGDDASSLLKHADTSMYKAKELGPGRF 418 >UniRef50_D0Z8H3 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z8H3_EDWTE Length = 388 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 220/387 (56%), Gaps = 4/387 (1%) Query: 18 LRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAAT 77 + I + I +T++L + LS+ S+ TL+ YA+ NL L A T++Y+ EAAVVF D PAA Sbjct: 2 FQRIHIMIIAVTLLLAGIPLSLLSLFTLRTYAEHNLHLVAMTISYTSEAAVVFNDKPAAL 61 Query: 78 ETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNG 137 + L + ++ Q + A + D Q + W+ + ++ + + WL P+ + PI HNG Sbjct: 62 DALNMIAKREQIAEATITDVQHQVWVRWNSSTPSH-ESLNRLLRGWLLPSSVSGPIEHNG 120 Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + IG V L A S + F+ + L L C++L + +++ L R +H G+V+ L I V Sbjct: 121 QLIGFVTLKADGSMLMRFLGYLLLGLLCCLILIALLSLYLVRRMHAGIVDELYAIAKVAR 180 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 VR R +S RV +IAE + FNSLL E+E L +N L ALHDPLTGL Sbjct: 181 QVREQRTYSLRVPHSQIAEIEELSRGFNSLLTEVESQHTLLINENGVLTYKALHDPLTGL 240 Query: 258 ANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 NR F + + + + ++ ++FLDGD FK +NDTWGHA GDRVL+E+A RL++ Sbjct: 241 PNRTCFMNMLE---SFNPRQERVCVMFLDGDGFKAVNDTWGHAAGDRVLVEVASRLSQQI 297 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 RLGGDEFA++L ++++ E +++ + Q P L NG + +MT SIG+ + Sbjct: 298 RKTDMVARLGGDEFAILLRNIEAPREAERVARGILQAVPQPIVLSNGVRVSMTFSIGFTL 357 Query: 378 TIEHASAEKLQELADHNMYQAKHQRAE 404 + H+ L + AD MY++K + Sbjct: 358 SSPHSQPAALLDKADAAMYRSKQRGGG 384 >UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q087E2_SHEFN Length = 681 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 19/406 (4%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 T + L+ I M+ I+ + + + S + + K+ ++L + ++ ++ AA++F D Sbjct: 9 TISKKLQFILMSVALISTLTVTSIFSAFELSSAKREQVESLHSLSQMLSPNITAALLFDD 68 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQP 132 A E + + + + V + + +LA K P T ++ +I P Sbjct: 69 QDAIQELINPILLRSDVLSVSVTNVEGAVLA--QALSKRPSMTLTD--DDLNDITQVITP 124 Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 + + + G++ ++ DS I+ I F + +L + + L+ L + + + Sbjct: 125 LTLDNQNYGDLHISVDDSIITDRISFYGQFIVLLLLSSLCASFFLSLFLRRKFLSPMLYL 184 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW-----------QLRLQAK 241 + + ++++S R + E + FNS+LD +E+ L+ Sbjct: 185 AKISQKITESQDYSLRAQIQSEDEIGQLTTCFNSMLDNIEQRESSLETEVKLRTGELENA 244 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 N+QL A D LT L NR F + +L++ AL+F+D D FK IND+ GH Sbjct: 245 NSQLHEYAYQDGLTLLPNRRYFYEKLQSLIDT--DHMVFALIFIDLDGFKEINDSLGHEY 302 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GDR+L ++AKRL RLGGDEF +++ DV I + + Sbjct: 303 GDRLLHQVAKRLRGCVRDHDTVARLGGDEFTLIIEDVSDLEHAASIAEKVKSSLMQCISI 362 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +T SIG + E L + AD MY +K + + Sbjct: 363 EEVQ-VNVTGSIGLTFYPADGQNVEALVKHADQAMYLSKSKGRNRY 407 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 180/410 (43%), Gaps = 23/410 (5%) Query: 10 KRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVV 69 + K + ++ +F+T ++I + + T K L + A ++ ++ A+V+ Sbjct: 5 RNLDIKPKILASTLGIVFVTTLVIDVAIFAMQYHTAKTNLDARLNIEANIISQNISASVL 64 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 F D +E L++ EV D + + + H T+ ++F I Sbjct: 65 FDDEKTTSEILSSFKSDPAILKVEVLDLAEKVFSE-HVTKDGYIVGGADF--------SI 115 Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 +PI +G+ IG + + D+ IS I ++ +++A G+A L+ + + E++ Sbjct: 116 SKPIVFSGDEIGTLVVYVSDAEISSGISKTILFSITTLVIALGVAFLLSLAVQGMIFESI 175 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW-----------QLRL 238 + + V R++S R E R A FNS+L+++E+ L L Sbjct: 176 LALHNTSQRVAKTRDYSLRAEIFSEDEIGRLAKTFNSMLEQVEQRDAMLEKQVSHRTLEL 235 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTW 297 + + A HD LTGL NRA + ++ L LD D+FK INDT Sbjct: 236 EKLAEEFRFRAFHDNLTGLPNRALLNERFGLCIEHARRCGNKFVCLLLDLDDFKTINDTK 295 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +LI +A+RL RLGGDEF ++ D+++E + +QI + + + Sbjct: 296 GHDYGDELLIGVAQRLKASVRAEDLVCRLGGDEFIILATDIETEFDARQIANNILFALSE 355 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + +SIG A+ +H + L+ AD MY AK + Sbjct: 356 DIVIKDDK-IKTAVSIGGAIYPQHGETVGVLKRHADVAMYHAKDGGKNRF 404 >UniRef50_D1T2V1 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T2V1_9BURK Length = 410 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 130/402 (32%), Positives = 200/402 (49%), Gaps = 2/402 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M + T + + ++ + + L LL + ++ L+ YA NL L A ++ Sbjct: 1 MTRTGAAGPGDTLRAVVHRAHLSMALLAVALAGALLLMAGLVALRVYAGNNLHLVARSLA 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 Y++EAAVVF D A+ETL + + A V D + + A WH + + ++ Sbjct: 61 YTVEAAVVFGDRQDASETLRRMVVDEGVAEARVMDARGAVFAEWHAEQGGLAGRLAPAVA 120 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 + P+ PIRH GE G V L + + +F+ LA L C+ ++ + + L+R + Sbjct: 121 AMVGLQPVSVPIRHEGEDNGSVVLRSDGMGLLYFLGTGLAALALCLAVSGAVGLVLSRRM 180 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 +V L+ + V VR + RV RIAE DFN+LL E+E Q LQ + Sbjct: 181 LRDMVVPLQALASVARSVRRDHVQGLRVPPARIAELDALGDDFNALLQELEHRQALLQQR 240 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHA 300 N L ALHD LTGL+NR+ F + + ++ + A + ALLFLD D+FK +NDT GHA Sbjct: 241 NIALTHQALHDGLTGLSNRSHFEQHLQSRLDEARGAGTSVALLFLDNDHFKAVNDTHGHA 300 Query: 301 TGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 GD +L+ +++RL RLGGDEFA+V+ V + +++ S + + P Sbjct: 301 AGDALLVAVSQRLRAQARDTDLVARLGGDEFAIVMAPVAGLRDAERMISRVQEAMRDPVT 360 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 L NG Q +SIG AM H L AD MY+ K + Sbjct: 361 LDNGVQLQPAVSIGVAMFPLHGQDMGALMRFADMAMYRVKAE 402 >UniRef50_Q1GWL0 Diguanylate cyclase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GWL0_SPHAL Length = 408 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 115/377 (30%), Positives = 170/377 (45%), Gaps = 5/377 (1%) Query: 7 SLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA 66 + R T ++ L + L L + + V L+ YA +N+ L A Y +E Sbjct: 12 RIGARTTLQKLLSRFHFGITLFAVALSGLTILLAGVTALRGYADRNMELAAQLGAYGVEP 71 Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 A+VF D AA E + L + + V D + W DP +S FP Sbjct: 72 ALVFNDPVAAREGIEPLTRIPGITRLRVIDDVGRPVIEWKSPAGDPAP----LLSRTFFP 127 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 P +R NG IG V + S++ ++ L C+L+ + I L R LV Sbjct: 128 RPFAVTVRRNGSAIGTVEVWGDSSTLIDYVRLGLLAGLACLLVTALGTIFLARRFEYELV 187 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + L I V HDVR +R F +RV IAE R D N+LLDE++ WQ ++++ A L Sbjct: 188 KPLNEIATVAHDVRLHRRFDKRVKPLGIAELDRLGGDINALLDELQGWQGHMESERALLA 247 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRV 305 A HD LT L NRAAF + + + ALLF+D DNFK ND +GHA GD V Sbjct: 248 HRASHDTLTALPNRAAFDEQLALRIAAAKARDGRFALLFIDADNFKAANDNFGHAAGDAV 307 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L+ I+ + A R+GGDEF +++ + + L P L +G Sbjct: 308 LVAISACIRNTLRKDDFAARIGGDEFVVIIDPFDVGVVPADLANRLRACIADPITLPDGE 367 Query: 366 QTTMTLSIGYAMTIEHA 382 ++S+G A+ + Sbjct: 368 SYRASVSVGVAVFPDDG 384 >UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XC99_METSD Length = 682 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 12/404 (2%) Query: 12 PTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFA 71 + + L + +++++ ++ V + + +L A + +L AAV F Sbjct: 9 SSIRTKLLILQFIVTATALIVVFAVMLVFQYQSALTDIENDLNAQAEILKSNLSAAVAFE 68 Query: 72 DGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQ 131 D A E L++L + AEV + + + + + Sbjct: 69 DKKTADEILSSLRLVPSINRAEVYLYNGSRFSHYAKEANPHAPDIRIPYTGLHRMNRRYE 128 Query: 132 PIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKN 191 I + + + + + ++ + V+ LLA A + L+ + E L + Sbjct: 129 LI-LEQKPLAILYIEINLNKLNARLGLFALVVLMAGLLAMLAARLIAARLNLLITEPLSS 187 Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLL-------DEMEEWQLRLQAKNAQ 244 +T V V + +N+ R + R EF A + +L +E+ + + Q Sbjct: 188 LTTFVSRVSAEQNYGLRTNMARRDEFGTLAKGIDGMLLSLYNHGKRLEDELSQRKLAEEQ 247 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGD 303 L + A +D +T L NR F + ++ ++ +++ L+F+D DNFK +NDT GH GD Sbjct: 248 LDKLAYYDTVTHLPNRHFFNEQLTLMLEHAAQRQQSCYLMFIDLDNFKSVNDTLGHLAGD 307 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 +L E R+ + R+GGDEFA++L D Q S + SA+ +F+ F + N Sbjct: 308 SLLREAGSRILQTLVPGSILCRIGGDEFAIILRD-QPLSAIDATASAIIALFSEKFVI-N 365 Query: 364 GHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 H+ + SIG + A L AD MY AK Sbjct: 366 AHEVFVGASIGISNFPADADHVSGLLRNADTAMYWAKADGKNTF 409 >UniRef50_B2HZ17 GGDEF domain protein n=12 Tax=Acinetobacter RepID=B2HZ17_ACIBC Length = 366 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 102/357 (28%), Positives = 163/357 (45%), Gaps = 2/357 (0%) Query: 45 LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILAS 104 ++ YA++NL L + T+ ++ AVVF D + L + D + +++A Sbjct: 1 METYAKQNLQLLSHTLLERIQPAVVFNDKITIEQILNEYTNDHSIRAIHIYDSEHHLIAQ 60 Query: 105 WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLT 164 + + HW P+ I H+ + +GE+ L I F+ + L Sbjct: 61 -SFKLSSQTSVLEKWFDHWFLNEPVHLTIYHHQQNVGELTLFGSSEKILQFLKMIMVGLA 119 Query: 165 GCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDF 224 +L + +++A+ +T++ V + ++ R RI EF F Sbjct: 120 IAMLFIVCALWWSVNLTYRQIMQAIYPLTNIAQIVSEQKAYNLRFPYNRIKEFQDLNTVF 179 Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLF 284 N LL+E++ W +LQ +N +L A HD LT L NR F + + + D SALLF Sbjct: 180 NELLEEIQIWDNQLQKENRKLSFQAHHDQLTLLPNRHYFYQILLDMFEDKDFDNKSALLF 239 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D +NFK IND +GH GD VL E+AKRL + RLGGDEFA++L+ + + Sbjct: 240 IDNNNFKSINDQFGHLAGDEVLKEMAKRLQTRLRHQDFIARLGGDEFAVILHSITHADHL 299 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQ 401 I L + P L N + S+G A++ +S E AD MY+AK Sbjct: 300 ISIAENLLESCKEPLHL-NDQTIYFSFSVGIALSQFASSPEDFIMQADQAMYKAKTS 355 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 82/355 (23%), Positives = 145/355 (40%), Gaps = 26/355 (7%) Query: 77 TETLAALGQQGQFSTAEVRDKQQNI--------LASWHYTRKDPGDTFSNFIS-----HW 123 + ++ + + A + ++ + I +A+ + IS + Sbjct: 284 QSLIQSIADKTRVPAANITEQSKQISPLDAQLIVANMSTMPDQSSHRNTKTISVISKQDF 343 Query: 124 LFPAPIIQPIRHNGETIGEVRLT-ARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLH 182 L + + +T+ +V + + +I+ S +L I + A + Sbjct: 344 LLGEAVNVSVFIIPKTLWKVVVVTPQMVAINSASKVSNLILMLLIAIMIIAAFLGFIYCR 403 Query: 183 NGLVEALKNITDVVHD--VRSNRNFSRRVSEERIAEFHRFALDFNSLL-------DEMEE 233 L+ + + + + + + + + R EF A FN +++ Sbjct: 404 RSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKL 463 Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKY 292 + QL ALHDPLTGL NR F+ + + SD + A+ F+D DNFK Sbjct: 464 QINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKI 523 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 INDT GH GD +L +++ RL+ G RLGGDEFA ++ V + + L Sbjct: 524 INDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGGDEFAFIITKVNTIEDAVTFAQRLN 583 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKL 406 + P ++ NG+ M SIG + + A++E+L AD MYQAK + Sbjct: 584 SLLKTPIEI-NGNNINMGSSIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTV 637 >UniRef50_C8QBT8 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QBT8_9ENTR Length = 404 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 142/401 (35%), Positives = 221/401 (55%), Gaps = 3/401 (0%) Query: 2 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT 61 M +N ++ + + LR IS + + ++L WLLL TS+L +K Y ++NL L A T++ Sbjct: 1 MKFENIKTEKSSIRNKLRKISTINAAVILLLCWLLLFSTSMLFIKSYEKRNLELIANTLS 60 Query: 62 YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS 121 SL AA VF D A + + LG QG FS A++ +Q +L W D F + Sbjct: 61 TSLTAATVFEDSYDAKKKVLLLGSQGMFSAAKLTSSEQTVLVDWQDNTNDD-SRFQRTLR 119 Query: 122 HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL 181 HW++ P+ + H +G + L+ ++++ FI +S+ +L+ ++ ++ ++ L Sbjct: 120 HWIYAEPLTVNVTHEDAVVGTLTLSGTVTNVADFIEYSVIILSCSMIFVFIVSFLVSELL 179 Query: 182 HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 H G++ + +NIT +H V + +FS R+S EF F+ D NSLL E++ + L Sbjct: 180 HRGILASFRNITSTIHYVIRSGDFSPRISGSSTKEFQVFSEDLNSLLAEVQTLKASLLRD 239 Query: 242 NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT 301 N L AL DPLTGLANRAAF S ++ L++ A++ LLFLDGD FK INDTWGHA Sbjct: 240 NKSLAAKALKDPLTGLANRAAFISKLSQLLDQQLAQENFVLLFLDGDRFKSINDTWGHAA 299 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VL IA RL+ RLGGDEFA+++ + SE +QQ+ + + + Sbjct: 300 GDEVLQSIATRLSGLVTKSDLVARLGGDEFAILITSMTSEEALQQLTARIEASITQKIAI 359 Query: 362 HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQR 402 G T +++IGYA + S + E AD +MY K++ Sbjct: 360 SAGVNITTSVTIGYAWSQHGDSVTSILERADMHMY--KNKG 398 >UniRef50_A7BSH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BSH2_9GAMM Length = 604 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 80/423 (18%), Positives = 160/423 (37%), Gaps = 26/423 (6%) Query: 2 MDNDNSLNKRPTFKRALRN--ISMTSIFITMMLIW----LLLSVTSVLTLKQYAQKNLAL 55 +D T R L I + + + + + + + + Y ++ L Sbjct: 182 IDITERKRADETLARTLTELEIILDNSPVGIAFLGQKQRFIRINRKLEKMCGYTEQELRN 241 Query: 56 TAATMTYSLEAAV-VFADGPAATETLAALGQQGQ---------FSTAEVRDK-QQNILAS 104 + Y F + +AT + ++ + D Q I + Sbjct: 242 HTPKILYFSPKGYKTFGNDNSATHEMEQFVRRKDGTSFWCHVKVKEIDPNDPAQGFIWSL 301 Query: 105 WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLT 164 T K + + + I + + ++I+ + + + Sbjct: 302 EDVTEKRQAEENLRLAATVFETTTEAILVTDANNHI--IIVNPAFTTITGYTFDEVVGKQ 359 Query: 165 GCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDF 224 IL + + + L++ K ++ + ++ + +S I + + + + Sbjct: 360 PKILSSGHHDAEFYQQMWTSLLQEGKWQGEIWNRRKNGEIYVEWISITTIRDANHQIVQY 419 Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALL 283 ++ ++ + + +L A HD LT L NR F + + + + A++ Sbjct: 420 VAVFTDIT----KRKQNEELILHQAHHDALTNLPNRILFVDRLKQALLTAKRHQGRVAVM 475 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 F+D D FK +NDT GH GD +L E+A+RL RLGGDEF +VL +Q+ S+ Sbjct: 476 FIDLDRFKSVNDTLGHDFGDLLLKEVAQRLIACIRESDTVARLGGDEFTVVLTQIQNISD 535 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQR 402 ++ I + + + PF + ++ + SIG A + AE L + AD MYQAK + Sbjct: 536 IRIIAQRMLKSLSQPF-IQKDNEAFIGGSIGIAFFPKDGQEAETLVKKADIAMYQAKQEG 594 Query: 403 AEK 405 Sbjct: 595 RNT 597 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 96/377 (25%), Positives = 156/377 (41%), Gaps = 19/377 (5%) Query: 46 KQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFST-AEVRDKQQNILAS 104 ++ ++ L ++ L ++ D + + + + V D + +L Sbjct: 39 QRAIKEQGELFLDSIDVMLRNSLYSLDVNSIVKLVQEFNEHQAVIETVRVFDAEGRLLIE 98 Query: 105 WHYTRKDPGDTFSNFISHWLFPAPII------------QPIRHNGETIGEVRLTARDSSI 152 + P +T + + I +PI T+G + + + Sbjct: 99 -STEKYLPLNTQPDSFGQKIVNHQTILYQQSDDYLVAAKPIIFGQRTVGAIAIKLSKEPL 157 Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEE 212 I + +A I L + + L L + H + + N S R+ + Sbjct: 158 KQKIAAVRSQGLIIAAVAGSGGILLALFISHSLTVPLNQLIKATHRI-TTGNLSYRIHLK 216 Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 EF A +FN + D +EE + Q NA+L HD LTGLANR I + Sbjct: 217 NKDEFFLLAKEFNQMSDWLEETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEIK 276 Query: 273 --NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 ++ A+LFLD D FK IND+ GH GD VLI IA+RL A RLGGDE Sbjct: 277 EKKANQDHCFAVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGDE 336 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQE 389 F +++ ++ +V QI + + + P L N Q +T+SIG ++ E + +A+ L Sbjct: 337 FVILIKNLSDIKQVTQIADRILKQMSEPLILEN-QQLVITMSIGVVVSQENYENADDLLR 395 Query: 390 LADHNMYQAKHQRAEKL 406 AD MY AK Q + Sbjct: 396 DADITMYHAKQQGKAQY 412 >UniRef50_Q21SS1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SS1_RHOFD Length = 571 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 7/264 (2%) Query: 145 LTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRN 204 + + I+ F+ + T IL + R + + ++ + R+ Sbjct: 304 VNPAFTQITGFMAHEVIGKTPAILSSGKHQEIFYRKMREDIAATGHWQGEIWNRRRTGET 363 Query: 205 FSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFR 264 + ++ ++ + + ++ +A Q+L A HD LTGL NRA F Sbjct: 364 YPEWLTINAVSNDDGEVTHYVGVFSDITT----RKAAEEQVLFLAHHDGLTGLPNRALFA 419 Query: 265 SGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 ++ + ++ + A++FLD DNFK NDT GH GD++L +A+RL Sbjct: 420 DRLHQAIVHAHRDRAKVAVMFLDLDNFKQTNDTLGHHIGDQLLQMVAQRLTNCMREGDTV 479 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA- 382 RLGGDEF +VL + + ++ + + + P L +GH+ +T SIG ++ + + Sbjct: 480 ARLGGDEFTVVLESITNTGDIAYLSQKIIDTVSHPL-LLDGHEIAVTCSIGVSVYPDDSE 538 Query: 383 SAEKLQELADHNMYQAKHQRAEKL 406 ++ L + AD MY+AK Sbjct: 539 ESDDLIKYADTAMYRAKEGGRNNF 562 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 7/266 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + I+ + + ++ A + L + + ++ + +S Sbjct: 586 LEVNQAYQQITGYDKEEIIGKLPSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSG 645 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 ++ +S ++A+ ++ ++ ++ + + +L A HD LT L NRA Sbjct: 646 ESYPEWLSISQVADAKGSVQNYVAVFTDIT----QRKLSEERLQFLANHDALTHLPNRAL 701 Query: 263 FRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 + I+ + + KT A+LF+D D FK INDT GH TGD +L E AKRL E Sbjct: 702 LQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETD 761 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 R GGDEF +++ D + I + PF L G + ++ SIG ++ + Sbjct: 762 TVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILV-GRELFISASIGISVYPDD 820 Query: 382 A-SAEKLQELADHNMYQAKHQRAEKL 406 L + AD MY+AK Sbjct: 821 GLDTASLLKHADAAMYRAKESGKNTF 846 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 10/235 (4%) Query: 181 LHNGLVEALK---NITDVVHDVRSNRNFSRRVS----EERIAEFHRFALDFNSLLDEMEE 233 +H G+ LK I ++ + +N + + A+ ALD +L ++ Sbjct: 441 IHGGIALPLKSEGKINGILGIIYIEKNQNLESNNLSLLTGFAQLASIALDNANLYQAAQQ 500 Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKY 292 + L A HD LT L NR F ++ +N + K A++FLD D+FK Sbjct: 501 ELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKK 560 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 +NDT GH GD++L IA+R ++ R+GGDEF ++L+++ + + Sbjct: 561 VNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKII 620 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+ + N H+ +T SIG A+ + AE L + AD MYQAK Sbjct: 621 DTLANPWIIGN-HEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNY 674 >UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V50_RHOFD Length = 678 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 14/322 (4%) Query: 92 AEVRDKQQNIL----ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTA 147 RD Q L T + + S + + + I + + Sbjct: 354 VVARDAQGQPLRMIGTHTDITARHEREEALRLASTVILTMDEAVTVTNMRNEI--ISVNP 411 Query: 148 RDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSR 207 + I+ + + ++ + + T + + L ++ + +S + + Sbjct: 412 AFTVITGYFASEVIGRNPKLMASGTHSATFYQDMWAKLATTGNWHGEICNRRKSGKLYVE 471 Query: 208 RVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI 267 +S +++ + + ++ ++ +A ++ A D LT L NRA F + Sbjct: 472 WLSIKQVRDEQGVPSHYVAVFSDIS----ERKASEVRMQHLAHFDVLTNLPNRALFSDRL 527 Query: 268 NTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYR 325 + + K AL+F+D D FK +ND GH GD +L E+A+RL + R Sbjct: 528 RQAIAKARRDKTQLALMFMDLDRFKPVNDQLGHQVGDLLLQEVARRLLDCVRRESDTVAR 587 Query: 326 LGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE 385 +GGDEF ++L D+++ + + NL F++ H+ ++ SIG A+ EH E Sbjct: 588 IGGDEFVVMLPDLETVQAATLVAEKILAALNLVFEIGE-HRIHISSSIGIAIFPEHGQDE 646 Query: 386 K-LQELADHNMYQAKHQRAEKL 406 L + AD MY AK ++ Sbjct: 647 NHLLKSADAAMYLAKENGRNRV 668 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 6/232 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R + L+E + ++ + +S ++ ++ I + H + ++ ++ E Sbjct: 321 FYRKMWKALLETGQWQGEIWNRRKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITED-- 378 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + ++ A HD LT L NR F + + + A+LFLD D FK IND Sbjct: 379 --KRNQERIKHQAYHDALTDLPNRLLFIDRLTQAIAQATRNCYMLAVLFLDLDRFKQIND 436 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GHA GD +L +A RL RLGGDEF ++L + S + ++ + Sbjct: 437 TYGHALGDLLLQGVAGRLRRAVRDSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASL 496 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+ +T SIG A+ AE L AD MY+AK Q Sbjct: 497 RQPWSFEGIPSFCITTSIGIAVCPTDGEEAETLMHNADAAMYRAKAQGRNHY 548 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 94/413 (22%), Positives = 160/413 (38%), Gaps = 23/413 (5%) Query: 9 NKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV 68 + + N+ + + + I+++ V+ KQ ++ AV Sbjct: 3 GRFKSLTWKQTNLVVFTALFFAIAIFVVEIALVVIATKQQLTTTQQELLDSVEQPAANAV 62 Query: 69 VFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL---- 124 D A +TL + +A + ++ S +K+ TF + + Sbjct: 63 WALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNDSQTFISLSNKLFDDLK 122 Query: 125 -FPAPIIQPIRHNG----ETIGEVRLTARDSSISHFIWFSLAV-LTGCILLASGIAITLT 178 P+ +P G + IG + + +++ ++ L + A + + L+ Sbjct: 123 EISRPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTLVLS 182 Query: 179 RHLHNGLVEALKNITDVVHDVRSN---RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 H L + + I++ + + + N + + E FN +L + Sbjct: 183 VVFHRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFS--- 239 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIN 294 ++L + A DPLTGL NR I + S K+ AL+F+D D FK IN Sbjct: 240 ----QTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNIN 295 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GHA GD+ L IA+ L G + RLGGDEF ++ V S + L Sbjct: 296 DSLGHALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQ 355 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 N+P L N H SIG ++ E SAE L AD MY AK + + Sbjct: 356 LNVPIQL-NEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQW 407 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 13/313 (4%) Query: 99 QNILAS--WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFI 156 + S W ++ + F +S + +P+ I TI + R + ++ + Sbjct: 125 GQCMTSIKWERQIREQ-EKFIRKLSRAVEQSPVAIIITDTSGTIEY--VNPRFTQLTGYT 181 Query: 157 WFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAE 216 IL + R L + + + + ++ + S I Sbjct: 182 SAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITN 241 Query: 217 FHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA 276 + F + +++ + + + A +D LTGL NR F ++ + + Sbjct: 242 GNEQITHFIAFQEDIT----ERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHR 297 Query: 277 RKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMV 334 A+LFLD D FK+INDT GH GD++L A RL E R R GGDEF ++ Sbjct: 298 HNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIIL 357 Query: 335 LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADH 393 L D+ E ++ + F F L + + ++ IG ++ E L + AD Sbjct: 358 LPDIDDVQEAVRVAQKIIDAFTQVFVLPD-IELFISTCIGISIFPNDGRDTETLIKNADM 416 Query: 394 NMYQAKHQRAEKL 406 MY+AK Q + Sbjct: 417 AMYRAKEQGRSRY 429 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 143/399 (35%), Gaps = 20/399 (5%) Query: 12 PTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFA 71 + R L I + S+ ++++ SV L A T +L + Sbjct: 9 KSIGRKLLLIVLPSLLFGTVVMFSAFEHYSVRDRLSALNSRLDSFAITQGAALVKPLWEF 68 Query: 72 DGPAATETLAALGQQGQFSTAEVRDKQQNILASWHY-TRKDPGDTFSNFISHWLFPAPII 130 D A + + A V I+AS D F + P+I Sbjct: 69 DFAAVQRQFQSYPDVPELFEATVFGIGGEIVASAQGGDTDGRRDVFRKVV-------PLI 121 Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCI-LLASGIAITLTRHLHNGLVEAL 189 Q +G + + D + + A + + L + + + L Sbjct: 122 QQTPGGEYPVGRLEVAFHDGKVRSELVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTGPL 181 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + + +H S + E +N LL E+++ + + A Sbjct: 182 TRLRNSLHHNASV-LMREPLVWSSRDELGEVVHAYNQLLTEIDQRT-------EDIHQLA 233 Query: 250 LHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 D LTGL NR I + + ++ ALLF D DNFK +NDT GH GD +L Sbjct: 234 NRDLLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRI 293 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 IA R+ + R GGDEF +V+ + S E + L + +P L + + Sbjct: 294 IADRIHDIMRGMDTVARWGGDEFVIVVESLNSAGEAASVAEKLIETIGVPVQLGS-NLLR 352 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +S+G +M + L + AD +++AK + Sbjct: 353 VGVSVGISMYPQDGADITTLIKNADMALFEAKGRGRNTF 391 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 117/311 (37%), Gaps = 11/311 (3%) Query: 102 LASWHYTRKDPGDTFSNFISHWLFPAPIIQP----IRHNGETIGEVRLTARDSSISHFIW 157 LA + ++ T S A + + V + + I+ + Sbjct: 295 LAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSI 354 Query: 158 FSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEF 217 + T +L + R + L + + ++ + RS + +S I E Sbjct: 355 EEIHGRTPAVLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEG 414 Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR 277 + + ++ + + A++ A HD LTGL NR + + + + Sbjct: 415 DGGVSHYIGIFSDITD----RKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRN 470 Query: 278 K-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 +A+LFLD D FK INDT GH GD +L ++ +R R GGDEF +VL Sbjct: 471 STQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLP 530 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNM 395 D++ + I + P L H+ T+T SIG A+ L AD M Sbjct: 531 DLEHGQDAGTIARKILAALTEPCRLGP-HELTVTGSIGIALYPGDGADPSMLLRNADAAM 589 Query: 396 YQAKHQRAEKL 406 Y+AK Sbjct: 590 YRAKADGRNGF 600 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 310 bits (794), Expect = 7e-83, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 19/294 (6%) Query: 130 IQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEAL 189 + P++ L +SS I + LA G AI L + + + Sbjct: 319 VTPLQDQHGLDWLSVLVIPESSFMAQIDANTRTTLLLCFLALGCAIYLGVCTASWIARPI 378 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLD--------------EMEEWQ 235 + + S + F + V+ + E FN + + + + Sbjct: 379 LRFSQASQAISSGQ-FDQTVAVKGFKEIGVLQQSFNRMAEKLQATFSDLEAANLALTKEV 437 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYI 293 Q Q ALHDPLTG NRA F + + + A+LF+D D FK + Sbjct: 438 AERQRAEEQFKHLALHDPLTGFPNRAFFMEQLERAVKQTQRHSQYLFAVLFIDLDRFKIV 497 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 ND+ GH GD++L IA +L RLGGDEF ++L ++ ++ ++ + Q Sbjct: 498 NDSLGHEVGDQLLGAIAHQLHSLVRATDIVARLGGDEFVILLEPIEEVNDAVRVADRIVQ 557 Query: 354 IFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAEKL 406 + P DL N Q ++ S+G A+ + +++ A + AD MY+AK++ Sbjct: 558 ELSAPIDLSN-RQVFISASVGIALSSPDYSQATDILRDADIAMYRAKNRGKACF 610 >UniRef50_B3E9B7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9B7_GEOLS Length = 664 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 73/404 (18%), Positives = 143/404 (35%), Gaps = 27/404 (6%) Query: 17 ALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLA----LTAATMTYSLEAAVVFAD 72 +L+ +F+ + I+ L + + + L + ++ A++ A+ Sbjct: 4 SLKYRIALVVFVLQVAIFSPLLWFTFTAYRDADLQQLQTREDVFMRLVSQLGRKALLTAE 63 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQP 132 +A + + + ++ ++AS + ++ I Sbjct: 64 PTDFQLFIAPFSKDSHINRIILLNQSGIVVASTAPVDLGGPLPVQKNERNTVWKTSEIAN 123 Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 E +G + + + + + + + ++ + L + L LK + Sbjct: 124 AT---EQLGAITVHFSRAELDKKVEALVKRGIPIAVAGIILSALVGLGLGSLLTRRLKAL 180 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 + + + V+ E A FN + + LQ +L A HD Sbjct: 181 EQATRRMGAG-DMEVTVAISGNDEVAHLAQVFNEMSGSLRSQFDELQQVQQELSFQAQHD 239 Query: 253 PLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGD---------NFKYINDTWGHATGD 303 PLTGL NR F + + + K +FK IND++GH GD Sbjct: 240 PLTGLPNRLLFDLRCSQAIATARQHKQL--------LALLFFDLDHFKNINDSYGHQVGD 291 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 VL +A RL + RLGGDEF +++ ++ E E + ++ + +P + Sbjct: 292 AVLRCVAARLTMALKDHNLIARLGGDEFCVLIEQLEQEQEAAAVAESVLHMLTVPLE-CE 350 Query: 364 GHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKL 406 H+ ++ SIG + E L AD MY+AK Sbjct: 351 QHEFFLSASIGICLYPRDGDDEVRLLRNADTAMYRAKAAGRGGY 394 >UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCS0_9BURK Length = 665 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 155/405 (38%), Gaps = 26/405 (6%) Query: 21 ISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETL 80 + + + +++I + L +LTL+Q + + E A++ + E + Sbjct: 14 LPLRYTMMLVVVIGVTLPAILLLTLEQQLAEKSQ---KALLAQSETALMKIGSVSIAEPM 70 Query: 81 ------------AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAP 128 A L + Q + D N R D + S Sbjct: 71 WVVDRVALDAAAARLLESPQVVAVRIEDGLANT-PEMERIRPDFAGSLDKDTSAGRLTRR 129 Query: 129 IIQPIRHNGETIGEVRLTAR---DSSISHFIWFSLAVLTGCILLASGIAI--TLTRHLHN 183 Q + +GE +G + + + + VL +LA + L + Sbjct: 130 -TQSVIRSGEPLGTLVVWFDASYGQGLLQARRDQMLVLVALQVLAILAVLMPVLVSRVLR 188 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 + LK + D + + R E + +E+ +L KNA Sbjct: 189 PIER-LKEHASALLDHSRDDGPGQVFVWRRQDELGLLGRHLGRVQEELRGLFTQLGNKNA 247 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATG 302 QL + A +D LTGL NR+ F + M ++ + + F+D D FK +ND+ GHA G Sbjct: 248 QLQQMAFYDQLTGLPNRSLFIDLVQREMLSAQRNQQQFGIFFIDLDRFKAVNDSMGHAAG 307 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D +LIE+A+RL E R GDEF +++ D++ + ++ + + P L Sbjct: 308 DALLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQRVLRSIEAPVVLA 367 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 N ++ SIG ++ E E L + AD +YQAK + Sbjct: 368 NA-PVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRARY 411 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 12/293 (4%) Query: 118 NFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITL 177 N + L+ + + + + V + + L I + ++ L Sbjct: 407 NPPADRLYHSFFYRENKLREDVGWTVVMEVSIVPYLKELMSKLNTNFLSIYALALLSFLL 466 Query: 178 TRHLHNGLVEALKNITDVVHDVRS--NRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 R L + + ++ + D + + +N + IAE F + ++ + Sbjct: 467 ARFLTSISTKPVQKLADAIGVITRNLEKNPPLNLPGTNIAEIKELTESFRDMANKAMSYL 526 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIN 294 L+ A DPLTGL NR R I + ++ ++ A+LF+D D FK +N Sbjct: 527 EELKK-------MAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVN 579 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GDR+L+++AKRL+ R GGDEF V+ DV+ +V Q+ + + Sbjct: 580 DTLGHDVGDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSL 639 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 F+ PF+ NG ++ S+G A+ ++ + +L + AD MY+AK + Sbjct: 640 FSTPFE-ANGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGKSNF 691 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 125/313 (39%), Gaps = 9/313 (2%) Query: 97 KQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFI 156 + + + S T+ + L AP+ I + I + +S + Sbjct: 227 RDRVAIFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEY--VNRAFVLVSGYS 284 Query: 157 WFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAE 216 + +L + +L R + + L ++ + + F + I + Sbjct: 285 EDEVLGRNPRLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRD 344 Query: 217 FHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA 276 F + ++E + + QL+ A HD LTGL NR ++ + + Sbjct: 345 DDGVVTHFMA----VKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKR 400 Query: 277 -RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVL 335 + L+FLD D FK +ND+ GH GD +L ++ RL RLGGDEF +VL Sbjct: 401 EGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVL 460 Query: 336 YDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHN 394 QS +E+ ++ ++ + P +L GH+ + SIG A+ + L + AD Sbjct: 461 THFQSTTELAEVAEKISAALDEPVELS-GHKVHVGASIGIAIYPDDGDNFNALMKDADTA 519 Query: 395 MYQAKHQRAEKLV 407 MY+AK + Sbjct: 520 MYRAKQKGRNTFC 532 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 139/368 (37%), Gaps = 31/368 (8%) Query: 62 YSLEAAVVFADGPAAT-ETLAALGQQGQFSTAEVRDKQQ---NIL---ASWHYTRK---- 110 Y + A + AA E LA LG Q A V D +++ A++ + Sbjct: 701 YDVAPADLADRYKAADDELLARLGSQ--VYEARVLDADGHYRDVIFHKATYGKPGENGGG 758 Query: 111 ---------DPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 + + + + I + + + I+ + + Sbjct: 759 LVGVMLDITERKRMEARLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVI 818 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 +L + + L + ++ + + + F ++ + + Sbjct: 819 GRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKV 878 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-S 280 + + ++ L+ + QL A HDPLTGL NR ++ + + +T Sbjct: 879 AHYVGVFSDIT----ELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGL 934 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 A+ F+D D FK INDT GH GDRVL E+A RL RLGGDEF +V+ DV Sbjct: 935 AVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGE 994 Query: 341 ESEVQQICSALTQIFNL-PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQA 398 + V I + + P + H+ + SIG ++ + AE L + AD MY+A Sbjct: 995 PTAVSHIAEKILNVLQASPVTVE--HEFFVGASIGISVFPQDGADAETLMKNADVAMYRA 1052 Query: 399 KHQRAEKL 406 K + Sbjct: 1053 KERGRNTY 1060 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 121/317 (38%), Gaps = 8/317 (2%) Query: 94 VRDKQQNIL--ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSS 151 VRD+ ++ A + + + V + + Sbjct: 372 VRDEGGRVVRVAGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTE 431 Query: 152 ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSE 211 ++ + + L + + L EA ++ + ++ F ++ Sbjct: 432 VTGYSRDEVVGQNPRFLQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTL 491 Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 + + + ++ +L+ +L A HDPLT L NR S + + Sbjct: 492 NAVRNEVGHVTHYVGVFTDIS----KLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHAL 547 Query: 272 NNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 + + R A++FLD D FK +ND+ GHA GD +L +A RL RLGGDE Sbjct: 548 DGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDE 607 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQE 389 F ++L V++ ++ + L ++ PF L NGH+ + SIG + + L Sbjct: 608 FMVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVR 667 Query: 390 LADHNMYQAKHQRAEKL 406 AD MY+AK Q Sbjct: 668 NADAAMYRAKAQGRNTY 684 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 29/343 (8%) Query: 67 AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP 126 AV++ DG A L +G + ++R+ + A+ ++ Sbjct: 417 AVLYNDGSHAASRL--IGTTEDVTERKLREADLRVAATAFECQESIM------------- 461 Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 + + I +R+ + + + + T +L + + +G+ Sbjct: 462 ------VTDANQLI--LRVNRAFTELFGYTAQDVLGATPRVLQSGRHDPAFYAAMWDGIT 513 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 ++ ++ F +S + + + ++ +A + Sbjct: 514 RGGAWQGEIWDRRKNGECFPVWLSITVVCGDDGGVSHYVATHTDIT----LRKAAEDDIR 569 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRV 305 + A +DPLTGL NR + ++ M+ + R ALLFLD D FK +ND +GH GD + Sbjct: 570 QLAFYDPLTGLPNRRLLQDRLHQAMSQARRERGRLALLFLDLDKFKPVNDDFGHQAGDEL 629 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L +A+RL RLGGDEF ++L +++ + + + Q F PF L G Sbjct: 630 LQAVAQRLQACVRESDTVARLGGDEFVLLLPSIEAAQDAMAVAEKIHQAFGRPFTLSAGR 689 Query: 366 QTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKLV 407 TM+ S G A+ EHAS E L AD MYQAK ++ V Sbjct: 690 NATMSFSTGIAVYPEHASDEKALMRHADEAMYQAKAAGRDRFV 732 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 9/307 (2%) Query: 102 LASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 +A+ +++ + +S + +P I + I + R S ++ + + Sbjct: 350 VAARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQY--VNPRFSQVTGYASKEVI 407 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 IL + L L + + ++++ + F + I + Sbjct: 408 GKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVI 467 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTS 280 + S+ +++ + +L+R A +D LTGL NR + + + + Sbjct: 468 THYISVKEDISI----RKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKV 523 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 AL+ LD D+FK +NDT GHA GD +L E A RL + RLGGDEF ++L D+ Sbjct: 524 ALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTD 583 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 S + + + N PFD+ GH+ + SIG A+ + L AD MY++K Sbjct: 584 TSSAEVVAEKILAACNQPFDVG-GHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSK 642 Query: 400 HQRAEKL 406 + Sbjct: 643 REGKGVF 649 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 11/322 (3%) Query: 89 FSTAEVR-DKQQNILASWHYTRKDPGDT-FSNFISHWLFPAPIIQPIRHNGETIGEVRLT 146 ++ ++++ LAS G + +P+ I I + Sbjct: 442 IRQVKILWEEKEAFLASLVDVTDLKGAQKQLKILKQATEQSPVSVIITDAEGHIEY--VN 499 Query: 147 ARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFS 206 + ++ + + +L + I+ + L L + + + ++ F Sbjct: 500 RKFEKLTGYTRQEVIGKNPRLLKSGKISQDQYKQLWRTLTSGQEWHGEFHNQKKNGELFW 559 Query: 207 RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSG 266 S I F + ++E R +A++ L A +D LTGL NR Sbjct: 560 ESASISPIKNEEGVITHFIA----IKEDITRRKAQDRILAYQANYDALTGLPNRFLAIDR 615 Query: 267 INTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYR 325 + + ++ + + A++F+D D FK +NDT GH GD +L ++A+RL + R Sbjct: 616 LKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVAR 675 Query: 326 LGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SA 384 LGGDEF +++ +++ S + I + PF+L + ++ SIG + + Sbjct: 676 LGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLE-EEAFISASIGITLYPDDGDDV 734 Query: 385 EKLQELADHNMYQAKHQRAEKL 406 L AD MY K Sbjct: 735 NALMRNADTAMYLGKRGGRNDF 756 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 114/297 (38%), Gaps = 9/297 (3%) Query: 112 PGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLAS 171 + +P+ I TI + + I+ + + IL + Sbjct: 774 QAQEQLKILYQATEQSPVSVVITDAEGTIEY--VNPKFEKITGYQRAEVIGQNPRILKSG 831 Query: 172 GIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEM 231 + + + + + + ++ F S I F ++ +++ Sbjct: 832 ETTTEEYKQIWKTITSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDI 891 Query: 232 EEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNF 290 +A+ L A +D LTGL NR + + +D +K A++F+D D+F Sbjct: 892 T----ERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHF 947 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K +NDT GH GD +L ++++RL + RLGGDEF ++L +++ + I S Sbjct: 948 KDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASK 1007 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + PF+L + ++ SIG + + L AD MY K Sbjct: 1008 ILSSLEKPFNLL-TEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDF 1063 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 6/233 (2%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 + + + L ++ + +S + + ++ +A+ + ++ ++ Sbjct: 569 AFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRPSHYVGVMTDIS--- 625 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIN 294 +L+ A+L +DPLT L NR +S + + +D A+LF+D D FK +N Sbjct: 626 -QLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVN 684 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH +GD +L +A+RL+E RLGGDEF ++L ++Q + + +L + Sbjct: 685 DSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSL 744 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L NG + + SIG ++ + + L + AD MYQAK + Sbjct: 745 LQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTY 797 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 +H++ L ++ + ++ + ++ I + + ++ ++ Sbjct: 374 FYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDIT---- 429 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + ++ A D LT L NR F + + N+ + A++FLD D FK IND Sbjct: 430 ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRIND 489 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD+VL+E A R++ RLGGDEF ++L ++ +V ++ + Sbjct: 490 SLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHV 549 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L + ++ +T SIG A+ E + E L + AD MY+AK Sbjct: 550 KQPF-LVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSY 600 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 L + L+ + ++ + + + ++ + F ++ ++ Sbjct: 1013 LFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVFTDIT---- 1068 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + L A D LTGL NR F+ +N + + ALLFLD D FK+IND Sbjct: 1069 ERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHIND 1128 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +L AKRL RLGGDEF ++L V I + + F Sbjct: 1129 SMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAF 1188 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 PF L + T++ SIG ++ A A+ L + AD MY AK Sbjct: 1189 QTPFLLED-KSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNF 1239 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 7/233 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + + L + ++ + +S + +S + + + + ++ Sbjct: 467 FYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAFSDIT---- 522 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + + +L A +D LT L NR F + T + S + ALLF+D D FK++ND Sbjct: 523 KRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFVND 582 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD++L E+A RL RLGGDEF ++L ++ V ++ + Sbjct: 583 TLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGMIDKL 642 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLV 407 + + + H+ ++ SIG + E A L + AD MY+AK Sbjct: 643 EERYCIQD-HELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRGSFC 694 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 7/264 (2%) Query: 145 LTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRN 204 + S I+ + T +L + + + L ++ + ++ Sbjct: 707 VNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGEL 766 Query: 205 FSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFR 264 + ++ + R F ++ ++ + A+L A HDPLTGL NR F Sbjct: 767 YPSWLTISAVRNSDREITHFVAVFADISSI----KHAQAKLDYQAHHDPLTGLPNRTLFE 822 Query: 265 SGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 + + ++ + + + A+LFLD D FK+IND+ GH GD +L IA+RL E Sbjct: 823 NRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTV 882 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA- 382 RLGGDEF ++L + S+ I + L FN PF H+ + SIG ++ + Sbjct: 883 ARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGE-HEFFTSASIGISLYPQDGT 941 Query: 383 SAEKLQELADHNMYQAKHQRAEKL 406 L AD MY++K + ++ Sbjct: 942 DVSTLIRNADAAMYRSKAKGRNRV 965 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 7/228 (3%) Query: 179 RHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRL 238 + + + + + ++ ++ + V+ + F ++ ++ Sbjct: 448 QRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDIT----LR 503 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTW 297 + +L A HD LTGL NR+ F + ++++ A+LF+D D FK+INDT Sbjct: 504 KQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTL 563 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L ++A+R+ RLGGDEF +++ + S + I + Sbjct: 564 GHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEK 623 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 PF++ G++ ++ SIG ++ E A L + AD MYQAK + Sbjct: 624 PFNIK-GNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKS 670 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 131/359 (36%), Gaps = 28/359 (7%) Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 F + A A +Q + AE + + A ++ T S+ + Sbjct: 118 FIETQNAHREAEAHARQKELQAAEQLRRIEEQ-ARQQLEQRVRERTLELTQSNERLSNEV 176 Query: 130 IQPIRHNG---------ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASG-------- 172 +R E E + + I + +TG + Sbjct: 177 AVRMRAESGLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREEALGHNPRSFK 236 Query: 173 ---IAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLD 229 T ++ + E ++ ++ + +R++ + ++ + Sbjct: 237 SDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFS 296 Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGD 288 ++ E +A +L R A +D LT L NR F + N+ + A+ F+D D Sbjct: 297 DISES----KATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLD 352 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK +NDT GH+ GD +L +A+RL R+GGDEF ++L D+ V ++ Sbjct: 353 RFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVARVA 412 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + + GH + SIG A+ ++ E L + AD MY+AK Sbjct: 413 RKVLEELQKSISIK-GHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRGNY 470 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 126/315 (40%), Gaps = 9/315 (2%) Query: 95 RDKQQNILA--SWHYTRKDPGDTF-SNFISHWLFPAPIIQPIRHNGETIGEVRLTAR--D 149 +A SW ++ S S P+ N +T + + A + Sbjct: 216 THPIGQPIAAESWQAAQQARDPGLVSAVASDGRVKRLAFYPMYLNSQTTPYLFMWAGIPE 275 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHL-HNGLVEALKNITDVVHDVRSNRNFSRR 208 I + + + ++ L R LV+ L + H+ ++ + Sbjct: 276 QQILAPANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPWQLP 335 Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + AE + + F ++ +E + +L A HD LTGLANR ++ Sbjct: 336 SQYCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLD 395 Query: 269 TLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 + A+L +D D F+ IND+ GH GDR+L +I KRL + RLG Sbjct: 396 HAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLG 455 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEK 386 GDEFA+VL D+ +E + + L + + P + N H +T SIG ++ + Sbjct: 456 GDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHH-IVVTASIGISLFPNDGNDSIT 514 Query: 387 LQELADHNMYQAKHQ 401 L AD MYQ+K Sbjct: 515 LLRNADLAMYQSKRH 529 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 131/301 (43%), Gaps = 10/301 (3%) Query: 108 TRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCI 167 ++ + S + I + + I + + S IS + T + Sbjct: 904 SQHKKTEAQIELASKVFEQSREGIMITDSNQKI--LMVNEAFSEISGYSVEETLGKTPRM 961 Query: 168 LLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSL 227 L + + +++ + E ++ + ++ F +S R + ++ + Sbjct: 962 LASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGI 1021 Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLD 286 +++ +++ ++ A +DPLTGL NR +N ++ +D T ALLF+D Sbjct: 1022 FNDIS----KVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFID 1077 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D+FK +NDT GH GD++LIE+ +R+ + R GGDEF +VL D E+ Sbjct: 1078 LDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPD-TGENGAVH 1136 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + + + + +L ++ +T SIG A+ + A+ L + AD MYQAK+ Sbjct: 1137 VAEKILESISDQLNLKP-YKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNV 1195 Query: 406 L 406 Sbjct: 1196 Y 1196 >UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K6P1_AZOSB Length = 690 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 93/426 (21%), Positives = 151/426 (35%), Gaps = 33/426 (7%) Query: 13 TFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFAD 72 + K+ L + + + I LL + L A + + + + E V+ + Sbjct: 8 SLKQRLLMVVLVPAAVLAATISGLLLIRDTQALDDAATERGIAIVSFLAPAAEYGVISGN 67 Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDT---------FSNFISHW 123 T L A+ Q + + + ++LA R D T Sbjct: 68 RTNLTALLQAVLGQRDVAAVAIYNPDGSVLAVSGKPRLDDVSTMRRTHGPTTLERGDDRI 127 Query: 124 LFPAPIIQPIRH----------------NGETIGEVRLTARDSSISHFIWFSLAVLTGCI 167 F AP+ QP G +G V + S+ + + Sbjct: 128 SFAAPV-QPTPLVIDDLPGGDVDGTAAAGGGPLGWVYVEVDTRSLIERKRDLVLGTLAIV 186 Query: 168 LLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSL 227 +L + L + E L + + V + + AE FN++ Sbjct: 187 VLGLALTAAFALRLARSVAEPLARLVEAVKQMAAGNLEVSVPDSGAGAELQALETGFNAM 246 Query: 228 LDEMEEWQLRLQ----AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALL 283 M + LQ L ALHDPLTGL NR AF + + S S +L Sbjct: 247 ARTMADAHKTLQARVDEATELLAHQALHDPLTGLPNRRAFEQALEDAVTASRRAGDSGVL 306 Query: 284 -FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 F+D D FK +NDT GHA GD +L IA+ + + R+GGDEFA++L+ Sbjct: 307 CFIDLDRFKIVNDTCGHAAGDELLRRIARLIRQRVRAEDLICRIGGDEFALILHGC-GPE 365 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQ 401 + +I + + G + ++ SIG A+A + AD Y AK Sbjct: 366 DAHRIAENIREAVAAFRFTWEGRRFSVGASIGLVRIDGSLATASDVLVAADLACYAAKKS 425 Query: 402 RAEKLV 407 ++V Sbjct: 426 GRNRVV 431 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 96/408 (23%), Positives = 176/408 (43%), Gaps = 21/408 (5%) Query: 15 KRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAA----TMTYSLEAAVVF 70 + +L M + T + + +LLS+ ++ A + + A + AV Sbjct: 13 RHSLSAKLMNWVLFTALAVGVLLSIGQIIFESMRAVEEMDNEARQTLAIVRDPATQAVYS 72 Query: 71 ADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII 130 D A + L L ++ A + Q LA +T S +++ +F Sbjct: 73 IDPDLAQQVLEGLFEKPSIRYAAISHPNQTTLAELSKPL---LETQSRWMTDAIFGKERE 129 Query: 131 QPIRH-----NGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL--HN 183 I GE+++ ++ ++F ++L L + + HL H Sbjct: 130 YAISLFRPTPQPTYYGELKIVVD-TAPKSALFFERSILIFMTGLLRALLLAFVLHLVYHF 188 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEERI---AEFHRFALDFNSLLDEMEEWQLRLQA 240 L LK I + + + + + R E + NSLL +EE Q + QA Sbjct: 189 LLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAANSLLQSIEEHQQKRQA 248 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGH 299 A++++ + +D LTGL R+ F + I +++S+A + A+ + D+FK IN+ G+ Sbjct: 249 AEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDFKSINEQLGY 308 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 + GD++L A+RL H RLGGD+FA++L++V S V +L + + PF Sbjct: 309 SQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAESLLREISRPF 368 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 ++ T ++ +IG A+ + A AEK+ + A+ M AK Sbjct: 369 EIEE-QLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAKSVANNHF 415 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 129/319 (40%), Gaps = 9/319 (2%) Query: 90 STAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARD 149 + RD+Q+ +L T++ + + + I I + + Sbjct: 206 ARIVPRDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRI--ISVNRAY 263 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 +I + + + + A + R+L + L E ++++ +S F Sbjct: 264 ETIMGYREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWF 323 Query: 210 SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT 269 S ++ + ++ +++ E + AQ+ A HD LTGL NR + Sbjct: 324 SVTQVTNSRGEPEHYIAIFNDITEH----KNSRAQIEFLAHHDALTGLPNRILLNDRLEM 379 Query: 270 LMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 + + +LF+D D FK +ND+ GH GD++L E AKRL RLGG Sbjct: 380 AITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGG 439 Query: 329 DEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKL 387 DEF ++ V++E + + L + LP+ + +G +T SIG A+ + L Sbjct: 440 DEFVVLFPRVRTEGNLADLTIKLREQLQLPYTV-DGISLHITPSIGIAVYPDDGEDPNTL 498 Query: 388 QELADHNMYQAKHQRAEKL 406 + AD MY AK + Sbjct: 499 IKNADAAMYLAKEKGRNNY 517 >UniRef50_Q21TF3 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TF3_RHOFD Length = 572 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 114/264 (43%), Gaps = 4/264 (1%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + L+ ++ IL+ +AI L + ++ L+ + D + S Sbjct: 304 LGLSQPLENVVRETSKLGWNTVQIILVLGVLAILLAALVSRAVIGPLRKMVDAMSAF-SK 362 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 + +S R E A N + + + L+ L A HD LTGL NRA Sbjct: 363 EHVVNELSAARKDEIGLLASSLNDMQNIIVANMRDLKESRQALEHLAQHDSLTGLPNRAL 422 Query: 263 FRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 F + ++ + K ALLF+D D FK INDT GH GD +L AKR+ Sbjct: 423 FDDRLRQAVSQARRDKTRMALLFVDLDAFKDINDTCGHHVGDLLLNAAAKRMQACVRHAD 482 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 R+GGDEF ++L V+ + + + + + + PFDL +G + SIG A+ EH Sbjct: 483 TVGRMGGDEFVVLLTHVEEDQDAVLVAEKICKALSQPFDL-DGRSLLIGSSIGVALYPEH 541 Query: 382 ASAE-KLQELADHNMYQAKHQRAE 404 S E L AD MY AK Sbjct: 542 GSDELTLSRSADAAMYLAKESGGN 565 >UniRef50_C6WYT7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYT7_METML Length = 526 Score = 304 bits (778), Expect = 6e-81, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 123/323 (38%), Gaps = 9/323 (2%) Query: 88 QFSTAEVRDKQQNILASWHYTRK-DPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLT 146 + A V D N+L + + R N + + I +++ Sbjct: 190 ETFKAPVTDNDGNLLGTVGFARDISEQKRIENELKVSAIAMESQEGIIITDANSKILKIN 249 Query: 147 ARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFS 206 + I+ F +L + + + + ++ + +S + Sbjct: 250 DAFTKITGFTSEEAVGNRMTLLKSGVHDAAFYKEMWESISTQGSWQGEIWNKRKSGEIYP 309 Query: 207 RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSG 266 ++ + ++ + ++ ++ ++ A +DPLT L NR+ Sbjct: 310 EWLTISAVKNAEGVVTNYVGTMIDITA----RKSIEERVHHMAHYDPLTDLPNRSLLTDR 365 Query: 267 INTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAY 324 ++ + + A++FLD D FK +NDT GH GD +L +A RL Sbjct: 366 LHQALAQARRENAMLAVMFLDLDKFKIVNDTLGHDIGDALLKAVAIRLTNCFKRQTDTVS 425 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-S 383 RLGGDEF ++L +++E +V + + Q F + H ++ SIG ++ ++ Sbjct: 426 RLGGDEFVVLLAKIETEQDVAMVAQEVIQSLTETFYIEE-HVINISCSIGISLHPKNGND 484 Query: 384 AEKLQELADHNMYQAKHQRAEKL 406 L AD+ MY++KH Sbjct: 485 VASLLRSADNAMYESKHAGRGCF 507 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 7/219 (3%) Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 K + +++ RS + VS + + H ++ +L ++ + + +L A Sbjct: 565 KWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDIS----QRKQAEERLQFLA 620 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGL NR + + + + + +LF+D D FK INDT GH GD +L E Sbjct: 621 THDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQE 680 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A RL E R GGDEF +++ D + + + + PF L + Sbjct: 681 VAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQ-QELY 739 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 ++ SIG ++ + L + AD MY+AK Sbjct: 740 ISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTF 778 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 74/391 (18%), Positives = 148/391 (37%), Gaps = 29/391 (7%) Query: 40 TSVLTLKQYAQKNLALTA-ATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQ 98 +LT + + TA + +V + + L + V D + Sbjct: 202 YGILTERDVTRLVAQRTADRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIGVLDGE 261 Query: 99 QNIL-----------------ASWHYTRKDPGDTFSNFISHWLFPAPIIQP----IRHNG 137 ++ H + S +I+ + Sbjct: 262 GELVDLVSFKDILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTD 321 Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + + + ++ + + L +L + + + +GL+ + +V + Sbjct: 322 AHARILSVNPAFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQWQGEVWN 381 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 ++ + + + I + + +L ++ RL+ A++ A +DPLTGL Sbjct: 382 RRKTGEVYPQLLHITAIRDREGVLTHYAALFTDIS----RLKETEARIRDLAYYDPLTGL 437 Query: 258 ANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF 316 NR + + ++ R A++F+D D FK IND+ GHA GD++L+EIA RL Sbjct: 438 PNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRAS 497 Query: 317 GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA 376 R+GGDEF +VL ++ E + + P ++ G + +T S+G A Sbjct: 498 LRDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNV-EGRELVVTTSVGVA 556 Query: 377 MTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + + A+ L + AD MY+AK + Sbjct: 557 VYPDDSRDADTLVKHADVAMYRAKDEGRNSF 587 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 116/304 (38%), Gaps = 9/304 (2%) Query: 105 WHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLT 164 + + + + + I I + + I+ + + Sbjct: 62 RDISGRRQTERQLRLAAQVFESSNEAILISDPDNRI--LTVNRAFGHITGYGEAEVRGSK 119 Query: 165 GCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDF 224 +L + + + L + + ++ + +S +F V+ + + F Sbjct: 120 ASMLFSDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHF 179 Query: 225 NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALL 283 +L ++ + + A++ A +D LT L NR ++ + ++ A+L Sbjct: 180 VALFTDIS----ERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVL 235 Query: 284 FLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESE 343 F+D D+FK INDT GH GD +L E+A+RLA R GGDEF ++L + E Sbjct: 236 FVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGE 295 Query: 344 VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 QI + + PF + H + SIG ++ + + L AD MY AK Sbjct: 296 AAQIAERILRTIQQPFQIGE-HSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHG 354 Query: 403 AEKL 406 Sbjct: 355 RNTF 358 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 127/319 (39%), Gaps = 14/319 (4%) Query: 94 VRDKQQNILA----SWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARD 149 + D + A S T K + + A I + I + + Sbjct: 923 IFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAKVFDRAGEAITITDSSGNI--ITVNDSF 980 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 I+ + + L + + L+E ++ + ++ + + Sbjct: 981 CRITGYSHQEVIGKNPRFLQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWL 1040 Query: 210 SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT 269 + + + + +++ ++ ++ ++ ++ A HD LTG+ NR+ + Sbjct: 1041 TVNSVRDENGSVVNYVAIFSDISAI----KSSQRRIEFLATHDELTGIPNRSLLMDRLKH 1096 Query: 270 LMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 + + +K A+LF+D DNFK IND+ GH GD++L + +RL RLGG Sbjct: 1097 AVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGG 1156 Query: 329 DEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKL 387 DEF VL DV S +V + + + F + N ++ SIG ++ + + L Sbjct: 1157 DEFVAVLTDV-SLEKVNSVAARIVDFLGASFSI-NDKSLFVSASIGISVFPDDGQDSLTL 1214 Query: 388 QELADHNMYQAKHQRAEKL 406 + AD MY+AK + + Sbjct: 1215 LKHADTAMYRAKERGRNQY 1233 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 75/385 (19%), Positives = 137/385 (35%), Gaps = 22/385 (5%) Query: 26 IFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAA--VVFADGPAATETLAAL 83 I++ + LL + L A ++ +AA V D E A L Sbjct: 302 IWLVGAALGLLFAWLGWLMA--------GRIARPISLISQAADKVAGGDLEY--ELPARL 351 Query: 84 GQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEV 143 G+ A + +++ + + K + + I V Sbjct: 352 GEGEV---AHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIV 408 Query: 144 RLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNR 203 + + I+ + + +L + + L ++ + ++ Sbjct: 409 MVNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGE 468 Query: 204 NFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAF 263 F V+ + + + ++ ++ + + ++ A +D LTGL NR Sbjct: 469 IFPEWVTISALRDETSQISHYVAVFLDIT----ERKKEEERINYLANYDVLTGLPNRYLL 524 Query: 264 RSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK 322 I +++ A+LF+D D FK IND+ GH GD +L +A RL Sbjct: 525 SDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDT 584 Query: 323 AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA 382 RLGGDEF +L ++ S EV + + + F L +Q ++T SIG + + Sbjct: 585 IARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGE-YQLSITPSIGICIYPDDG 643 Query: 383 SAE-KLQELADHNMYQAKHQRAEKL 406 +L AD MYQAK Sbjct: 644 ETSVELLRNADLAMYQAKDDGRNNF 668 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 30/114 (26%), Gaps = 1/114 (0%) Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAI-TLTRHLHNGLVEALKNI 192 + +G L +D + + L + A G+ L + + + I Sbjct: 272 YREYQGLGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLI 331 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + V + E + + ++ + + + L Sbjct: 332 SQAADKVAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLR 385 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 89/404 (22%), Positives = 161/404 (39%), Gaps = 23/404 (5%) Query: 16 RALRNISMTSIFITMMLIWLLLSVTSVLT------LKQYAQKNLALTAATMTYSLEAAVV 69 +L ++F+ +++ L S+ +L + L + A Sbjct: 8 HSLAFKQARTVFLVSVVLGLCFSLYHILADLHQEQRRIEEHYQFKLLQNY--SNASQAAY 65 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPI 129 + A + + L ++ D ++L H T P Sbjct: 66 HLNHLLAEQVASTLMMDNAIYRVKIVDDFGDVLTQKHREIDSQSLTTQLLSKILTPAQPF 125 Query: 130 IQPIRHN---GETIGEVRLTARDSSISH-FIWFSLAVLTGCILLASGIAITLTRHLHNGL 185 + H +GE+ + SSI+ FI S ++ + + L + L Sbjct: 126 YKTELHQPNANAIVGELSFSVDGSSIADAFIKKSTRIVLFDLFRNILLTSILLFFFYFKL 185 Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 + + + + V+ +++ +N E R AL F++L A +QL Sbjct: 186 SKPIITLINWVNSLQNRKNALELPPGNNNDELGRLALSFHNLWQA-------RAAAESQL 238 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLF-LDGDNFKYINDTWGHATGDR 304 + A D LTGLANR+ +N + S + + +LF LD D FK IND+ GH GD Sbjct: 239 NQLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPGVLFYLDLDRFKTINDSLGHTIGDN 298 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 ++ IAKRL + A R+GGDEFA+++ + ++ + L + + P+ + + Sbjct: 299 LMRTIAKRLEAWLQPGEIAARIGGDEFAILIPKL-NKEDAANKAKQLLTLISNPYSIDD- 356 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 HQ T+SIG + + S+ + AD +Y+AK K + Sbjct: 357 HQLYCTVSIGISTFADKGISSIDVLRQADTALYRAKVAGRNKYM 400 >UniRef50_Q2LY94 Sensory box ggdef family protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY94_SYNAS Length = 354 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 3/178 (1%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFK 291 + + A HD LTGL NR F + + + RKT A++ LD D FK Sbjct: 161 RDITERKRIEDAIRHLAYHDVLTGLPNRILFTDRLVLAIAQAKRYRKTMAVMMLDLDRFK 220 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 INDT GH GD +L + +RL RLGGDEF ++L +++ ++ + Sbjct: 221 TINDTAGHHIGDLLLQSVGRRLTHTLREEDTVARLGGDEFMILLPEIKQALSSFRVADKI 280 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 F PF + G++ + + SIG A+ + + L + AD MYQAK R Sbjct: 281 VSAFKEPF-ICEGNELSTSASIGIAVYPDDGEDMDTLMKHADTAMYQAKSTGRNTYCR 337 >UniRef50_Q15NC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NC5_PSEA6 Length = 681 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 83/418 (19%), Positives = 170/418 (40%), Gaps = 27/418 (6%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQ----YAQKNLALTAATMTYSLEAAVV 69 R ++N + + ++++ + +SV +Q + +L + + L + Sbjct: 2 LFRTIKNTTTMLTVVAIVIVCAAVVASSVEEYEQLYLEATRADLDGLSENLASDLVPLIA 61 Query: 70 FA-DGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAP 128 D T TL L + A V D+ + + + P + S ++ L P Sbjct: 62 SDPDIFEVTTTLLRLDRYENVKYAVVFDENWQRINVYFGSMSVPEELDSAINTNELRLQP 121 Query: 129 IIQPIRHNGE-----------TIGEVRLTARDSSISHFIWFSLAV-LTGCILLASGIAIT 176 ++ +G + + S + +L + + L +AI Sbjct: 122 HGVYVKDGELIALKLVGDARLPLGHLLIVNDSSGPLYSSKLTLLKRVLPLVFLVLFVAIV 181 Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME---- 232 + + L L ++ V ++ ++S R+ E + D NS+++ + Sbjct: 182 GSLFVQRQLFLPLSRLSRVAKRIQDTHDYSLRIDTRGKQEVAELSRDINSMMETINAETQ 241 Query: 233 ---EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGD 288 ++ +L+ + + R A D LTGL NR F + + + + L++ D D Sbjct: 242 KNAKYTEQLKEQQKAMERLANFDGLTGLPNRQFFMETLRLELAKAKRDERNLVLMYFDLD 301 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK +ND++GH GD VL+E+ +R RLGGDEF ++L++ ++ E+ +I Sbjct: 302 GFKGVNDSFGHEIGDLVLMEVCRRTKSILRDGDLISRLGGDEFLILLHNEPNDLELYEIS 361 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE-HASAEKLQELADHNMYQAKHQRAEK 405 L N+PF++ + + + +SIG A + + + + AD MY++K Sbjct: 362 ERLVSGLNMPFEIQSW-EVQVGVSIGIARASDSNFNVSEFVSNADIAMYRSKLAGRST 418 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 9/303 (2%) Query: 106 HYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTG 165 + + + + +S + +PI + + I + + IS + + + Sbjct: 568 DLSAQKKAEEQALTLSQAIEQSPISMILTNIDSKIEY--VNSAFEKISGYAASEVIGQSA 625 Query: 166 CILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFN 225 +L + +L + L + + ++ + ++ F I + + Sbjct: 626 SMLKSGLTPKSLYKQLWDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDNAGVTKHYL 685 Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLF 284 +L ++ ++ + + ++L A +D LTGL NR ++ ++ ++ + A+LF Sbjct: 686 ALKQDVTQY----KQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNVAVLF 741 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D+FK +NDT GH+ GD +LI+ A RL RLGGDEF ++L ++ EV Sbjct: 742 LDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINEPIEV 801 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRA 403 + I S L + F PF L N + T+SIG A+ + ++L AD MY +K + Sbjct: 802 EIIASKLLEQFYQPFRLEN-RELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKDRGR 860 Query: 404 EKL 406 Sbjct: 861 NTY 863 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R + L + ++ + ++ F ++ + ++ + ++ Sbjct: 340 FYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYVGISRDIT---- 395 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 + +L A HD LTGL NRA F + + + + A+LFLD D FK IND Sbjct: 396 LRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVIND 455 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L + KRL R GGDEF ++L ++ + + + Sbjct: 456 TLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDVL 515 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF + GH+ ++ SIG ++ + L AD MY+AK Sbjct: 516 AEPFSVQ-GHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDY 566 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 71/323 (21%), Positives = 125/323 (38%), Gaps = 19/323 (5%) Query: 97 KQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFI 156 L + R + + IS ++ + H E + + ++ Sbjct: 441 ATGVPLYNAAGERIGAIEAIRD-ISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYV 499 Query: 157 WFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV------- 209 LTG L A+ + + D+ + S R + + Sbjct: 500 NKKFIQLTGFSLEE---AVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNG 556 Query: 210 ----SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 S I+ + + + +E+ + A + A DPLT L NR + Sbjct: 557 EVYWSITSISPLRNDSGEITHFIANVEDIN-ERKNAEATIEHLAYFDPLTDLPNRRMLQD 615 Query: 266 GINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 + + S + AL++LD D+FK++ND+ GH GD +L E+A R + Sbjct: 616 RLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVC 675 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-AS 383 RLGGDEFA++L+D+ + +V I L + P L +G + +T SIG A+ Sbjct: 676 RLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPL-DGREVVVTASIGIALFPRDGGD 734 Query: 384 AEKLQELADHNMYQAKHQRAEKL 406 + L++ AD +Y AK + Sbjct: 735 VKNLEKHADIALYHAKEEGKNTF 757 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 18/230 (7%) Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSL---------------LDEMEEWQLRL 238 +V R SE R E + + N++ + Sbjct: 226 RAAKNVELRLRCQERRSERRQPEQNYITVVINAMGIYGTHPEHGTPFNGTYGVARDITER 285 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTW 297 + + A HD LT L NR F+ + ++++ K A++FLD D FK++NDT Sbjct: 286 KKAEQAITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAIMFLDLDRFKWVNDTL 345 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH GD +L ++A RL + R+GGDEF M+L+++ + I + Sbjct: 346 GHLYGDELLKQVAARLRNCMREQDTLARMGGDEFTMLLHELNQPDDATVIAQKIFDELKR 405 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 PF L + + ++ SIG A+ +H + E L + AD MY K + Sbjct: 406 PFMLDD-REIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWRGKNGF 454 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 4/191 (2%) Query: 219 RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK 278 R D +EE ++ + A +D LTGL NR F + + + K Sbjct: 166 RLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 279 T-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMVLY 336 A++FLD D FK INDT GHA GDR+L+ +AKRL R GGDEF + L Sbjct: 226 RPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLS 285 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNM 395 + + + + +F PF + +G++ +T SIG ++ S + L + AD M Sbjct: 286 AISDVKDAFTVAQKIIDVFRTPFVI-DGYELFITTSIGISVYPHDGRSGDALVKNADVAM 344 Query: 396 YQAKHQRAEKL 406 Y+AK Q Sbjct: 345 YRAKEQGRNNC 355 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 7/227 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + +VE+ +V + + V+ + + ++ +L ++ + Sbjct: 537 MWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGRIAEYVTLFSDIT----ERKQ 592 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGH 299 + + R A DPLTGLANR+ + ++ + ++ LLFLD D FK+IND+ GH Sbjct: 593 QEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGH 652 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD +L+++A+RL RLGGDEF +V++D+ +++ I L + PF Sbjct: 653 DVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPF 712 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 L G + ++ S+G + + + L AD MY+AK + Sbjct: 713 ALR-GARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNR 758 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 7/228 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 L + + + F +S I F + ++++++ E + Sbjct: 363 LWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEH----KQ 418 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGH 299 ++ A +D LT L NR F +N + ++ ++ A+ F+D D FK +NDT GH Sbjct: 419 AEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGH 478 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 +TGDR+L IA RL R GGDEF ++L ++ + + + + P Sbjct: 479 STGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPV 538 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + H ++ SIG A+ +AE L + AD MY +K + Sbjct: 539 IIDD-HDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNY 585 >UniRef50_C4LEB0 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEB0_TOLAT Length = 543 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 3/222 (1%) Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 E + D V + + R + + + + ++ E L+ + Sbjct: 319 SEPIYGSADKVLGTFAIYHHDRHSPKPEDIKLIEASANLAAIAIERYHAVEALRQSEEKH 378 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDR 304 R A +D LTGL R F + M ++ K AL+FLD D FK +NDT+GHA GDR Sbjct: 379 RRLAHYDVLTGLPTRVLFSDRLKQAMRSAKRNKKNLALMFLDLDKFKPVNDTFGHAVGDR 438 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L E+A R+ R+GGDEF ++L+DV + + Q N PF L G Sbjct: 439 LLKEVASRMLGCVRESDTVCRIGGDEFVILLHDVADAESAFNVAEKIRQALNQPFKLA-G 497 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 HQ ++ SIG A+ E+ L + AD MY+AK ++ Sbjct: 498 HQMNISCSIGIALYPENGVDERTLTKNADMAMYRAKENGRDQ 539 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 158/441 (35%), Gaps = 64/441 (14%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLK-----------QYAQKNLA-----LTA 57 R +S I + ++ L S+L ++ Q Q +L L + Sbjct: 4 LSRYFSTVSFILIVLAAGVLGPLYQRLSLLQMQNLAESRNIAMAQVFQNSLHTQLESLIS 63 Query: 58 ATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS 117 + + + V D T+ L + +V ++ + + S TR+ Sbjct: 64 DAVGRDIHSGQVTDDILQLQATVHDLMRDTSVIKVKVYNRLGSTIFS-TDTRQIGDSQLQ 122 Query: 118 NFISHWLFPAPIIQPIRHNGETI---GEVR---------------------------LTA 147 N + + H G++ +T Sbjct: 123 NPGFRAAISGLVTSELIHRNTIDAFEGQLVEVDVLSSYIPILGKEHAVEGAFELYQNVTP 182 Query: 148 RDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSR 207 + ++ +W+ A + + + R + D +++ R+ Sbjct: 183 FVTQLNRNLWWVTAAVVLVFAALYLMQFLVVRRAQG-------ILEDQEGRIKAARDTLE 235 Query: 208 RVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGI 267 R E R +E + ++L A HDPLTGLANR F + Sbjct: 236 IQVAARTEELKRTNSQ-------LEGEISERRQAQSKLNYLAYHDPLTGLANRRCFIERL 288 Query: 268 NTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRL 326 ++ + A+L++D D FK +ND+ GH GD +L+ +A RL+E L RL Sbjct: 289 EESLSEGERHGEKLAVLYIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLIDMLARL 348 Query: 327 GGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE- 385 GGDEF ++ +SE EV+ + + F PF L + H+ +T S+G ++ ++ Sbjct: 349 GGDEFICLMEAARSEDEVELLAREIIAAFEYPFKLGD-HELFLTASVGISLCPSDGNSVL 407 Query: 386 KLQELADHNMYQAKHQRAEKL 406 L AD MY+AK Sbjct: 408 DLMRNADTAMYRAKMLGRGNF 428 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 8/224 (3%) Query: 189 LKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFN----SLLDEMEEWQLRLQAKNAQ 244 LK + V + R + + I + +L+ + + + Sbjct: 629 LKILGGVNANHLRYEFVGLRKTGQPIDVEILIGRGISEGQPALIGSLLDIT-ERKEAEKT 687 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGD 303 + A HDPLTGLANR F I + ++ + AL+FLD D FK IND+ GH+ GD Sbjct: 688 IEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGD 747 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 L E+A+RL R GGDEF ++L E E++ I + + P+D+ N Sbjct: 748 AALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDI-N 806 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 H+ MT SIG A + A L + AD +Y+AK Sbjct: 807 DHEVFMTCSIGIASYPKDGREAITLVKNADTALYRAKDLGRNNF 850 >UniRef50_UPI0001699903 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699903 Length = 592 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 3/173 (1%) Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIN 294 R + Q+ A +D LTGL NR+ + +N+++ ALLF+D D FK +N Sbjct: 276 TRRKESEQQIRFQANYDALTGLPNRSLLLDRLTHAINSAEREAWELALLFVDLDQFKIVN 335 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT+GH GD +L A+RL R GGDEF ++L D+ + QI + + Sbjct: 336 DTFGHVMGDELLQHAAERLKSCVRESDTVARFGGDEFIILLQDISGADDAAQIADKVIEK 395 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L G + + SIG + + A ++ L AD MY+AK + Sbjct: 396 LSR-YFLLAGREVIIGASIGITLFPDDASDSDTLLRNADMAMYRAKETSRNRY 447 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 85/353 (24%), Positives = 134/353 (37%), Gaps = 55/353 (15%) Query: 104 SWHYTRKDPGDTFSNFISHWLFPAPIIQP----IRHNGETIGEVRLTARDSSISHFIWFS 159 + S +S F +P IRH IG + L + + S Sbjct: 135 HLTLPITSAVNPLSEKVSQEAFLLAATRPEAGKIRH---VIGYLHLAVNQRGLLLEVLPS 191 Query: 160 LAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHR 219 +A + + + + + L+ L + + + + + S + V E Sbjct: 192 IAWVVAACVTFAVLCLMLSLSLTRRITSPISRLAKLADGIASGK-LEEPVKVTGGGEVEE 250 Query: 220 FALDFNSLLDEM------------------EEWQLRL-QAKNA-------------QLLR 247 A N ++ + EE +L + +L + Sbjct: 251 IAAILNGVITGISNYKKEMDVDHQLLSMKVEERTSQLSKRNQELNTAVKQVTRTKNRLRK 310 Query: 248 TALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVL 306 A +D LT L NR F ++ L+ + K ALLFLD DNFK IND+ GH+ GD +L Sbjct: 311 MAYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDSLGHSAGDLLL 370 Query: 307 IEIAKRLAEFGGLRHKAY------------RLGGDEFAMVLYDVQSESEVQQICSALTQI 354 E+ +RL++ RLGGDEF +VL D+ + V + L Sbjct: 371 REVGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLDAPESVGVVAERLILA 430 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + P L +GH+ +T SIG A+ EHA+ E L +D MY AK Sbjct: 431 LSEPM-LIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAKASGKSTY 482 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 82/396 (20%), Positives = 154/396 (38%), Gaps = 32/396 (8%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADG 73 +LR ++ F T++ ++ + LT + T+ EAA F + Sbjct: 272 LNESLRQGILSVFFATLISAGGVIIIFRYLTQRS---------LNTVLQMTEAA--FRNT 320 Query: 74 PAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPI 133 A L + + D +S +F + + Sbjct: 321 EPARYK-PTLVSEFNILGHSIVDLDHQR----------KESEKQLLLSSSVFDNAVEGIV 369 Query: 134 RHNGETIGEV-RLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 N G + ++ ++S + L I + + + L+E + Sbjct: 370 ITN--LDGIIEQVNPACEAMSGYRLKELIGENPRIFRSDHHNSAFYQQMWQSLIEEGRWE 427 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 +V + ++ + VS R + ++ ++ E + +L A HD Sbjct: 428 GEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEI----KRSEEKLQHQAYHD 483 Query: 253 PLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 LT L NR F ++ + ++ K A+++LD DNFKYIND+ GH GD++L +I++ Sbjct: 484 ALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISE 543 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 RL RLGGDEF +++ +++ ++ +C + + LP L G T+ + Sbjct: 544 RLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALS-GRDYTVNV 602 Query: 372 SIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 S+G + + A E L + AD MY+AK Sbjct: 603 SMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGY 638 >UniRef50_B8GSP1 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSP1_THISH Length = 882 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 9/317 (2%) Query: 92 AEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSS 151 A V D+ I + + T + + + + I G I + + Sbjct: 568 ARVFDRPAVIWLAMNVTARKRLEESMRLNARVFEDSNEGIFITDAGNRI--ISANTAFTR 625 Query: 152 ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSE 211 I+ + + +L + + L ++ + ++ + + R + + +S Sbjct: 626 ITGYEAAEVIGRNPGLLSSGMHDEAFYQSLWEQVLLHGRWEGEIWNRRKDGRVYPQNLSI 685 Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 + + ++ ++ R + AQ+ ALHD LTGLANR R + + Sbjct: 686 SVVRDGEGRISHHIAIFSDIT----RRKEAEAQIRHMALHDNLTGLANRTLLRDRLTQAI 741 Query: 272 NNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 + R + ALLF+D D+FK +NDT GH GDRVL E+A+RL R+GGDE Sbjct: 742 EQARRDRNSLALLFIDLDDFKPVNDTHGHEAGDRVLKEVAQRLRAAVRRVDTVARMGGDE 801 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQE 389 F ++L ++ E Q+ + + P L NG + S+G A+ H + L Sbjct: 802 FVILLQALEQEDMAIQVAEKIIDSLSRPIQL-NGQTCLLGASVGIALHPRHGEDHDGLMR 860 Query: 390 LADHNMYQAKHQRAEKL 406 AD +YQAK + Sbjct: 861 AADQALYQAKSAGKNRY 877 >UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8Y9_9GAMM Length = 684 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 91/400 (22%), Positives = 167/400 (41%), Gaps = 27/400 (6%) Query: 24 TSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAV---VFADGPAATETL 80 T I +++L + + + L L+ Q+ ++ + S + A + P A + + Sbjct: 16 TIIIASLILSLVFGVLQAFLDLESEKQQIHNRFSSILLLSHDPAAQAAYQLNSPLAKQVI 75 Query: 81 AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRH----N 136 L AE+ D + LAS + + F+ F++++LF I Sbjct: 76 KGLLSHPDIIQAEIMDDFDSQLAS-DVDQPSDENEFTQFLANYLFSKQGHLSIPLIFSPK 134 Query: 137 GETIGEVRLTARDSSIS-HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDV 195 +G + +T +++ FI + V ++ +++ L + L L +T Sbjct: 135 NINVGSLSITLDSQAVAKSFIGRATNVFLLSLIKNLILSLILLAFFYKVLTHPLTKLTIW 194 Query: 196 VHDVRSNRNFSRRVSEE-RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 + ++ N + + EF F +L ++ AQL A D L Sbjct: 195 ISSIKYNNKAIDNPPIKIKKDEFGLLIKQFMALWK-------ERESAEAQLREYAYFDLL 247 Query: 255 TGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 TGL+NR ++ + + T AL ++D D FK+IND+ GHA GD +L+ I KRL Sbjct: 248 TGLSNRRHLSDILHNAIIKIQHQPTIGALFYMDLDRFKHINDSLGHAVGDALLVTIGKRL 307 Query: 314 AEFGGLRHK-AYRLGGDEFAMVLYDVQSESE-----VQQICSALTQIFNLPFDLHNGHQT 367 +EF RLGGDEF +++ D+ E Q+ + + P L GH Sbjct: 308 SEF-KNDDTSVARLGGDEFVILIPDIADTEEKAHEAATQLANKILTSIAEPHTLI-GHLL 365 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + SIG ++ + + + + + AD +Y+AK + Sbjct: 366 YTSASIGISIIRQDSNTGQDVLRHADIALYKAKAEGGNTY 405 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 19/277 (6%) Query: 143 VRLTARDSSISHFIWFSLAVLT-----------GCILLASGIAITLTRHLHNGLVEALKN 191 + + F S +L C ++ S + + Sbjct: 137 LVVRVDIEGRLQFASPSFCMLFGIDEEQLVGRELCPIINSSGQAVMKEAMQRLDCHPKSC 196 Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALH 251 ++ + + + E + ++ + + ++L+ A + Sbjct: 197 YHEICSQTLDGLRWIGWAMKGVVDEKGHI-EAIVGIGRDITD----RKKAEQEILQLAHY 251 Query: 252 DPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 D LTGL NR+ + ++ ++ ++ T A+LFLD D FK++ND +GH GD +L E++ Sbjct: 252 DTLTGLPNRSLLQDRLSQALSLANRGNVTLAVLFLDLDRFKHVNDAFGHQIGDLLLQEVS 311 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMT 370 +RL + R+GGDEF ++L ++ S+ I + + + F L GH+ Sbjct: 312 RRLKDCVRATDTVSRIGGDEFVIILTNLIKCSQAGSIAAKIISSMSRLFQLG-GHELYSG 370 Query: 371 LSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 SIG A+ + L + AD MYQAK Sbjct: 371 TSIGIALYPTDGNDVDTLLKHADMAMYQAKASGRGTF 407 >UniRef50_B4B6I0 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=B4B6I0_9CHRO Length = 459 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 87/393 (22%), Positives = 143/393 (36%), Gaps = 17/393 (4%) Query: 21 ISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETL 80 I + S+ L V + LT K NL + + A++ + Sbjct: 65 IPLLSVLGMATGSSLGAIVGAYLTKKGNFHNNLDRIEDVFSLIVRGAIIS-------PVI 117 Query: 81 AALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTF--SNFISHWLFPAPIIQPIRHNGE 138 ++L V Q L + + D + W+ P + Sbjct: 118 SSLIDVPSLFLGGVIPPNQLSLFWFQFCMGDALGVLVITPVCLTWISPIKWTYKQKIEAF 177 Query: 139 TIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHD 198 + L + ++ +L I+ + L + + ++ Sbjct: 178 IFFLLLLLISGIVFNGWLIKEQDLLPAFIIYPFLVLAPL--RFGSKGAATALLLVSIMAL 235 Query: 199 VRSNRNFSRRVSEERIAEFHRFALDFNS---LLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 + + V+ + L N + + +L L + AL+D LT Sbjct: 236 LGLVHDTGPFVASSPLKTLVLLWLFVNVAAVVGLVLAASISQLIQAKQHLEQMALYDSLT 295 Query: 256 GLANRAAFRSGINTLMNNSDARKTSAL-LFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 GL NR I + + + A+ L+LD D FK INDT GH GD+VLIE+AKRL Sbjct: 296 GLDNRILLTDKITAALARAKRYQNYAVVLYLDLDGFKLINDTMGHDMGDQVLIEVAKRLK 355 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 R+GGDEF ++L DV +++ + QI + P LHN Q + +SIG Sbjct: 356 MCVRQTDAVARIGGDEFVVLLQDVNHIQGAERVAQEIIQIISRPIQLHN-KQMHIGVSIG 414 Query: 375 YAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 A+ + + +L ADH MY AK Sbjct: 415 VAVAPGNGTNLNQLLRNADHAMYHAKQSGKNTY 447 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 7/264 (2%) Query: 145 LTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRN 204 + I + + IL + + N ++ ++ +S Sbjct: 738 VNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEI 797 Query: 205 FSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFR 264 F + ++ + I + +F L ++ + + QL + A +DPLT L NRA FR Sbjct: 798 FPKWLTIDAIRDEQGVISNFVGLFMDITQQ----KETEEQLEKLAYYDPLTELPNRALFR 853 Query: 265 SGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 + M S L F+D D FKY+ND+ GH GD +LI++A R+ Sbjct: 854 DRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTV 913 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA- 382 RLGGDEF ++L ++ ++V +I A+ + F L GH+ + SIG AM + Sbjct: 914 ARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQ-GHEVFIGGSIGIAMHPDDGE 972 Query: 383 SAEKLQELADHNMYQAKHQRAEKL 406 E L + AD MY+AK + Sbjct: 973 DYETLTKHADTAMYRAKEEGRGTY 996 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 78/377 (20%), Positives = 131/377 (34%), Gaps = 22/377 (5%) Query: 43 LTLKQYAQKNLALTAATMTYSLEAAVVF--ADGPAATETLAALGQQG---------QFST 91 L L A T ++ V+ DG A+ L Q Sbjct: 125 LGLPDAQGLEAVRAARACTPNIPLVVLTGLDDGHLASLALEEGAQDYLLKGEINARGLRR 184 Query: 92 AEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSS 151 A + + + ++ N I+ + A + I ++ ++ + Sbjct: 185 ALRYAIDRKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEA 244 Query: 152 ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSE 211 + I L V+ G + LH +I + + Sbjct: 245 LGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSI---LVRRDGSELPIDESRA 301 Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 + + A L D + L+ + A HD LT L NR + + Sbjct: 302 PILDRQGQIAGTVTVLHDVSVTRAMELK-----MAHLAQHDFLTDLPNRRVLDDRLRQAI 356 Query: 272 NNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 + + K A+LF+D D FK+IND+ GH GD+ L +A+RL R GGDE Sbjct: 357 SLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDE 416 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQE 389 F ++L +V + + + + LP + H+ ++ SIG + A AE L + Sbjct: 417 FVILLAEVTTADDAAIVAKKILSAVALPHRIGR-HELQISASIGISTCPNDADDAETLIK 475 Query: 390 LADHNMYQAKHQRAEKL 406 AD MYQAK + Sbjct: 476 HADIAMYQAKEKGRNNY 492 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFK 291 E + + A HD LTGL NRA F +N + ++ + A+ FLD D FK Sbjct: 635 EDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRFK 694 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 INDT GHA GD++L ++A+RL R GGDEF ++L VQ+ ++ +I L Sbjct: 695 VINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIAERL 754 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK-LV 407 PF L GH +T S+G A+ L AD +Y+AK + Sbjct: 755 LASLKPPFSLK-GHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYC 811 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 3/176 (1%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFK 291 + R + ++ A +D LTGLANR F ++ +M S R+ AL+FLD D FK Sbjct: 236 QDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFK 295 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 +NDT GHA GD +L + A+RL E RLGGDEF ++L D + ++ + ++ + Sbjct: 296 GVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKI 355 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + + PFDL + + S+G A+ + A L AD MY AK + Sbjct: 356 LKALSSPFDLG-VREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTF 410 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 3/188 (1%) Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-T 279 D +S++ + + QL R A HD LTGL NR F + ++ + Sbjct: 279 GGDESSVIWSICRDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQ 338 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 A+LFLD D FK INDT GH GD +L ++A R+A R+GGDEF ++L +V Sbjct: 339 VAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVD 398 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQA 398 + +V+++ + + PF++ + H+ +T SIG ++ ++L + AD MY Sbjct: 399 TVEDVKRMGQKILKTLAAPFNI-DTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCV 457 Query: 399 KHQRAEKL 406 K + + Sbjct: 458 KGEGRNNV 465 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 7/216 (3%) Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 +V + R+S + A F +++++ + + ++ R A +D Sbjct: 334 REVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITD----RKRAEEKIRRLAYYD 389 Query: 253 PLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 LTGL NR ++ + ++ ALLFLD D FK +ND+ GH GDR+L E+A Sbjct: 390 SLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAA 449 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 RL+ RLGGDEF ++ V++ ++ + + PF L + + Sbjct: 450 RLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTL-DRQTLHIAT 508 Query: 372 SIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 SIG + + + E L + AD MY AK + Sbjct: 509 SIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSY 544 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDN 289 + + + R A HD LTGL NRA F+ +N +N++ + A++FLD D Sbjct: 261 VARDISDRKKVEEVITRQAYHDTLTGLPNRALFKDRLNVALNHAKRNQQQLAIMFLDLDR 320 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK++NDT GH GD +L +A+RL+ + R+GGDEF ++L+D+Q + + + Sbjct: 321 FKWVNDTLGHFYGDELLKHVAQRLSGCLRAQDTLARMGGDEFTLLLHDLQQPEDASLVAA 380 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 + PF L + + ++ SIG A+ +H E L + AD MY K + Sbjct: 381 KIVDELKRPF-LLDEREIFISSSIGIALYPDHGDTIETLIKSADIAMYHVKWRGKNGY 437 >UniRef50_C5V2Q6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2Q6_9PROT Length = 564 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 7/236 (2%) Query: 175 ITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEW 234 I R + +++ ++ R +++ V+ + F + ++ Sbjct: 326 IQFYRKMWRAIIDQGHWQGEIWDKRRDGGLYAKSVNIIALRHQDGSIYRFVAQFSDIT-- 383 Query: 235 QLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYI 293 + K+ + A +DPLT L NR F+ +N + + + AL F+D D FK I Sbjct: 384 --EKKQKDELIHWQANYDPLTNLPNRRLFQDRLNQAIKLAHRTELPLALFFIDLDYFKEI 441 Query: 294 NDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQ 353 NDT GHA GD +L+E+A+R++ RLGGDEF ++L ++ +++ ++ + Sbjct: 442 NDTLGHANGDVLLMEVARRISSCVREADTVARLGGDEFTVILPELSDATQILRVAKNIVD 501 Query: 354 IFNLPFDLHNGHQ-TTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + PF N ++ SIG A + A + L + AD MY AK + + V Sbjct: 502 KLSQPFFFVNDETGYHVSASIGIANYPQDAMDTKGLIKCADKAMYAAKSEGRNRFV 557 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 RHL L E +V++ + + ++ ++ I + + ++ Sbjct: 339 FYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDIT---- 394 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + + +L A HDPLT L NR + + + K AL+FLD D FK+IND Sbjct: 395 QRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFIND 454 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GHA GD++L +A RL RLGGDEF +VL D++ V Q L Sbjct: 455 TLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRV 514 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQE-LADHNMYQAKHQRAEKL 406 L +GH +T S+G A+ + S ++ AD MY+AK + Sbjct: 515 QGMVTL-DGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNF 565 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 74/377 (19%), Positives = 138/377 (36%), Gaps = 40/377 (10%) Query: 58 ATMTYSLEAAVVFADGPAATE-----------TLAALGQQGQFSTAEVRDKQQNILASWH 106 M + AA + +D ++ + Q + + A++RD ++ + Sbjct: 357 DLMGEQIAAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDSNGEVIGAIG 416 Query: 107 YT-----RKDPGDTFSNFISHWLFPAPIIQP-IRHNGETIGEVRLTARDSSISHFIWFSL 160 + R + + W F + + EV L+ + F Sbjct: 417 ISVDVTGRNQAEEALRESEARWSFALEGGGDCVWDWNVSNNEVSLSKGGKGMFGFADDE- 475 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH----------DVRSNRNFSRRVS 210 + + ++ R + L I+D H VR + + + Sbjct: 476 --------IGNDMSEWNARVHPEDISRLLSRISDFFHSKADRFSAEYRVRCKDDSWKWIL 527 Query: 211 EERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTL 270 + ++ + + + R A +D LT L NR FR + Sbjct: 528 TRGMVAHRSTDGRVTRMIGTHTDL-SERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQT 586 Query: 271 MNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGD 329 + + ++ AL+ +D D+FK +NDT GH GD +L++ A+R+ R+GGD Sbjct: 587 IRLAKRDQSSFALMLIDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGD 646 Query: 330 EFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQ 388 EF ++L DV +++I + PF L + ++ SIG + A + E L Sbjct: 647 EFVVILPDVNDPDNIERIAQNIITKLAAPFVLGE-EKAFISASIGITLYPSDADSMETLL 705 Query: 389 ELADHNMYQAKHQRAEK 405 + AD MY AKH + Sbjct: 706 KNADQAMYVAKHLGRNR 722 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 139/358 (38%), Gaps = 31/358 (8%) Query: 75 AATETL---AALGQQGQFSTAEVRDKQQNILA-------------SWHYTRKDPGDTFSN 118 AA + L + Q V D + ++ S+ + + Sbjct: 211 AANDMLIRARDMLMDHQVRHLAVLDDRGQVVGLLGFQDLLAGAEQSYLKDLRRALEQRDK 270 Query: 119 FISHWLFPAPIIQPIRHNGETIGEVR--------LTARDSSISHFIWFSLAVLTGCILLA 170 ++ + + + + + + + ++ + +A T +L + Sbjct: 271 ALAQSRKHLQLAERVIDSSLEGIVITDAHARIEFVNPAFTHLTGYSLEEVAGRTPAVLSS 330 Query: 171 SGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE 230 + R + L E ++ + +S + ++ I + L + Sbjct: 331 GRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALYLELLTITAITNDDGDTTHYAGLFTD 390 Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDN 289 + + Q+ + A +DPLT L NR ++ + ++ + A++F+D D+ Sbjct: 391 ITHI----RENERQIRQLAYYDPLTRLPNRRLLDDRLSLAIKHAHRHRQRLAVMFIDLDH 446 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GHA GD +L+ +++RL E RLGGDEF +L D+Q E ++ Sbjct: 447 FKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGGDEFLALLPDLQEVDEAIRVTQ 506 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L + + P+ + + H + SIG ++ + S + L AD MY++K + Sbjct: 507 RLIEAISQPYTIGD-HDFRVGCSIGLSLYPDDGESPDALIRNADGAMYRSKTEGRNTY 563 >UniRef50_C7RS23 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=2 Tax=Betaproteobacteria RepID=C7RS23_9PROT Length = 439 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 122/339 (35%), Gaps = 11/339 (3%) Query: 71 ADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII 130 D A L A Q D + R+ F + A I Sbjct: 97 DDHQLAEAALRAGAQDYLVKGQFEHDALGRAI-RHALVRQRLESRLRLFEAALNSAANGI 155 Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALK 190 I I + + ++ G +L + + + ++ Sbjct: 156 V-ITDVNAAIEWANPAF-TAMTGRTLAEAVGRTPGEVLKSGRQDAAFYQRMWATILAGQV 213 Query: 191 NITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTAL 250 ++V+ + + ++ + + + F ++ ++ + ++ A Sbjct: 214 WSGELVNRRKDGSVYDEALTISPVTDMNGRIQHFVAIKQDIS----ERKVTEERVQHLAH 269 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEI 309 HD LT L NRA + + + R T AL+FLD D FK +NDT GH GD +L E+ Sbjct: 270 HDQLTDLPNRALLSDRLAQAVAQARRDRGTLALMFLDLDQFKPVNDTLGHDVGDLLLKEV 329 Query: 310 AKRLAEFG-GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 A RL RLGGDEF ++L + ++ + + PF + H+ Sbjct: 330 ALRLQSCVPRESDTVSRLGGDEFVILLAQMDKAADAVVVAGKILAALQRPFAIGP-HEIG 388 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 ++ S+G A+ +H +L + AD MY AK Sbjct: 389 ISASLGIAVYPQHGEDVNRLLKNADTAMYHAKKAGRNCY 427 >UniRef50_Q0EY23 Sensory box/GGDEF family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY23_9PROT Length = 544 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 3/179 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDN 289 + + +A +L+ A D LTGL NR ++ M ++ K A++FLD D Sbjct: 362 LSGAITKRKAAEKELVHMAHFDLLTGLPNRPLLYDRLDMAMAHAHREKKKLAVMFLDLDG 421 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFG-GLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK +ND GH GD VL E+A RL + RLGGDEFA++L ++ +V+ I Sbjct: 422 FKEVNDQLGHQAGDEVLQEVAHRLQQCVGRQTDTVARLGGDEFALLLGTIKDGQDVETIA 481 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + + P L +G + SIG A+ EH S ++L +D MY AK Sbjct: 482 ARVIESLGEPVMLSDGQPCNIGASIGIAIYPEHGLSQDELLSNSDTAMYSAKENGKNNY 540 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 119/320 (37%), Gaps = 11/320 (3%) Query: 96 DKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETI---GEVRLTARDSSI 152 + ++A W D Q + GE L + + + Sbjct: 219 NGSYRVIA-WSAAAADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEGILISDEKGL 277 Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDV--RSNRNFSRRVS 210 + + + +TG + T E K + + + ++RR S Sbjct: 278 IRDVNAAFSQITGYSRDEAIGQATSLLRSGRHDAEFYKKMWHALKETGTWRGEIWNRRKS 337 Query: 211 EERIAEFHRFAL--DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 E + NS + +L+ QL + A +DPLT L NR + Sbjct: 338 GAVFPELLTISKIDGQNSGFVAIFTDITQLKETEEQLQKLAHYDPLTELPNRYLINERLQ 397 Query: 269 TLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 + + R + A+ FLD D+FK IND+ GH GD++L A RL E R+G Sbjct: 398 QSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVGRIG 457 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEK 386 GDEF M+L D+ S I + P + G +++ S+G ++ + +AE Sbjct: 458 GDEFLMLLEDINSPDVATNIAEKIIGALRKP-TILEGRSVSVSASVGISIYPDDGQTAET 516 Query: 387 LQELADHNMYQAKHQRAEKL 406 L AD MY AK Q Sbjct: 517 LMSNADAAMYSAKEQGRNTF 536 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 123/315 (39%), Gaps = 18/315 (5%) Query: 94 VRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSIS 153 + D Q ++ TF+ + + I I + + ++ Sbjct: 1 MYDHDQQLI---------DIHTFAGIAKNIFEYSNESIIITDAQNRI--LFVNPAFEIVT 49 Query: 154 HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER 213 + + IL + + + N + + ++ + + + ++ Sbjct: 50 GYSAEEVIGKNPRILQSGMHDKQFYKKMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISV 109 Query: 214 IAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN 273 + + ++ ++ ++ E + QL R AL+D LT + NR + +++ Sbjct: 110 VKDQKGNMTNYVAMFSDITEH----KRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRM 165 Query: 274 SDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFA 332 S ALLFLD D FK INDT GH GD +L E A+RL + R GGDEF Sbjct: 166 SKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFV 225 Query: 333 MVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELA 391 ++L +++ E + + + PF N + ++ SIG ++ E L +A Sbjct: 226 IILPNLKHIREAAYMAEKIVESLKRPFCF-NHQEIYISTSIGISVYPYDGTDKETLIRMA 284 Query: 392 DHNMYQAKHQRAEKL 406 D MYQAK + Sbjct: 285 DRAMYQAKKNGRNQY 299 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 124/352 (35%), Gaps = 23/352 (6%) Query: 71 ADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYT-------------RKDPGDTFS 117 D TL + E L + Sbjct: 212 GDPEKIVATLMERAKNPSHHYFERTRPNGKTLEVRGVPLAEGGFVTVYTDISERRASAER 271 Query: 118 NFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITL 177 ++ ++ I + + + + ++ + F L T L++ I+ Sbjct: 272 EQLAQKVYSH-TPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLISLDEGIS- 329 Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAE-FHRFALDFNSLLDEMEEWQL 236 + + +++ ++ NF R+ + + +L ++ Sbjct: 330 QKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWILADIT---- 385 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 + ++ A HD LTGL NR A + L+ + T A++F+D D FK IND Sbjct: 386 ERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIIND 445 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L E+A RL+ RLGGDEF ++L + S ++ + + Sbjct: 446 TLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISAL 505 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + GH+ + SIG ++ + + + + AD MY AK Sbjct: 506 STAIE-AEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNY 556 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 3/179 (1%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGD 288 + + ++ + A +D LTGL NR+ + + + + + A++FLD D Sbjct: 463 AIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLD 522 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 FK INDT GH GD +L +A+RL E R+GGDEF +++ ++ ++ +I Sbjct: 523 RFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIA 582 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + P L N + +T SIG A+ E + L + AD MY+AK Q Sbjct: 583 EKILAAISKPLVL-NDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAF 640 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 37/116 (31%) Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 +H T + + + + + + + + + L L L IT Sbjct: 249 KHLKTTDWILAASYPIVEAYAPLKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLIT 308 Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 V + ++ ER E FNS++ +++ Q L+ + A Sbjct: 309 RHVEAIPDKSGLHNLINLERKDELGTLINAFNSMILSLDQHQNALRESESNFRALA 364 >UniRef50_C5V4E4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4E4_9PROT Length = 352 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 4/183 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLF 284 ++ + + + + + +L A +DPLT L NRA + + + + T AL+F Sbjct: 151 RMIGTLSDITV-RKNIDERLRYMAHYDPLTNLPNRALLSERLQQSVVRARRDQSTMALMF 209 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D FK +NDT GH TGD++L ++A RL R+GGDEF ++L+ + E + Sbjct: 210 LDLDKFKPVNDTLGHETGDQLLQQVAVRLLSCVRASDTIARIGGDEFVVLLHAIDQEPDA 269 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRA 403 + + N PF + H+ ++ SIG A +H + EK L AD MYQAK + Sbjct: 270 AMVAEKILHSLNRPFSIGE-HEIRISGSIGIAAYPQHGTDEKLLLINADIAMYQAKKEGR 328 Query: 404 EKL 406 Sbjct: 329 NSY 331 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 9/229 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERI-AEFHRFALDFNSLLDEMEEWQLRLQ 239 + L ++ ++ + + +S + E + S +D L+ Sbjct: 409 MWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHIGSFID-----ISELK 463 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWG 298 A ++ A HD LT LANR + + + + AL+ +D D FK INDT G Sbjct: 464 ATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLG 523 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD +L+++AKRL+ RLGGDEF + L + S ++ + +T+ + P Sbjct: 524 HQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAP 583 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 + + G + + SIG + S L + AD MY AK Sbjct: 584 YLIK-GQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNY 631 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 111/296 (37%), Gaps = 9/296 (3%) Query: 113 GDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASG 172 + S +P+ I + I + + I+ + + IL + Sbjct: 536 TEDQLKMFSRACDQSPVSIVITDSEGDIQY--VNPKFEEITGYKAGEVIGQNPRILKSGY 593 Query: 173 IAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME 232 L + + + + ++ F S + + + F ++ +++ Sbjct: 594 TTEPEYDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDIT 653 Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFK 291 + + L A +D LT L NR + + + A++F+D D+FK Sbjct: 654 QQ----KHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFK 709 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 INDT GH GD +L E RL RLGGDEF +++ + + + I + + Sbjct: 710 NINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQV 769 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + PF+L G + ++ SIG A + + L AD MY AK + Sbjct: 770 LDVLGEPFNLC-GEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVF 824 >UniRef50_Q0EYI6 Sensory box-containing diguanylate cyclase, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYI6_9PROT Length = 800 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 4/186 (2%) Query: 224 FNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SAL 282 F + + + + +L + A +D LTGL NR F +N + + K A+ Sbjct: 609 FLKTVADTLAVVIERKQSEERLQQLAHNDMLTGLPNRTLFYDRLNQALALAQRHKQAFAV 668 Query: 283 LFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES 342 +FLD D+FK INDT GH GD +L E A RL R+GGDEF ++L + Sbjct: 669 MFLDLDHFKEINDTLGHDMGDLLLREAATRLRSCVRSMDTVARMGGDEFTIILTETAVRE 728 Query: 343 EVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQ 401 V+++ L + PF L NG + SIG A+ +H +E L + AD MY AK + Sbjct: 729 AVEKVAEKLLRELQQPFSL-NGEIRHVGCSIGIALYPKHGLDSETLIKHADIAMYDAKRE 787 Query: 402 RAEKLV 407 Sbjct: 788 -RNSYC 792 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 8/210 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 + F + + + ++ +++++ E + QL+ A HDPLTGL N Sbjct: 415 KDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEH----RRYEEQLVYQATHDPLTGLPN 470 Query: 260 RAAFRSGINTLMN--NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 R + + + R ++FLD DNFK +NDT GH GD +L +A RL Sbjct: 471 RNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCL 530 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 RLGGDE+ +VL +V+ +V + + +F P L G++ +T SIG A+ Sbjct: 531 RGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLM-GNEIYVTASIGIAL 589 Query: 378 TIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L + AD MY AK Q Sbjct: 590 FPTDGETVDALLKNADAAMYHAKEQGKNNY 619 >UniRef50_C6P1C1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1C1_9PROT Length = 581 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 7/234 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + L+E ++ + + + ++S + + ++ + ++ + ++ Sbjct: 353 FYADMWKSLLEVGHWEGEIWNRRKDGEIYLEKLSIYTLKDAQGKVVNRVGVFSDITQSRV 412 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 + A HD LTGL NR FR N + + K A++++D D FK +ND Sbjct: 413 E----QETVAHHAQHDFLTGLPNRLLFRDRFNQQLALAKRYSKKFAVMYIDLDRFKPVND 468 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L+ +A RL R GGDEFA+++ +V ++ +V + + Sbjct: 469 TLGHQVGDLLLMAVADRLKSQVREIDTVSRFGGDEFAILVSEVVTQRDVTALAEKILAAL 528 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 PF L N H ++ S+G A+ + E + AD MY+AKH+ A R Sbjct: 529 KAPFVLEN-HTVNISGSLGIAIYPDDGMDMETILSNADTAMYKAKHKGANTYCR 581 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 145/366 (39%), Gaps = 20/366 (5%) Query: 48 YAQKNL-ALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWH 106 A +L + +++++ V D A TL+ A V + Q + Sbjct: 227 NADHSLYSAYQQLISHNIRHLAVSDDNGAIIGTLSMDNIMSDIELAYVEELHQIV----- 281 Query: 107 YTRKDPGDTFSNFISHWLFPAPIIQ----PIRHNGETIGEVRLTARDSSISHFIWFSLAV 162 + H L II+ I E + + + ++ + + Sbjct: 282 ---QQRDIALRESKKHLLVAEKIIEASLDGIMITDEQGTIISVNPAFTRVTGYKEAEVLG 338 Query: 163 LTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFAL 222 L IL + + L ++E ++ + +++ + + ++ I+E Sbjct: 339 LNSKILSSGRHTSDFYQQLWLCILEQGVWQGEIWNKRKNSEIYPQWLTIIEISEGVDNNK 398 Query: 223 DFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSA 281 F ++ ++ + ++ A +D LT L NR F ++ + + A Sbjct: 399 VFAAIFSDIS----ERKLAEKRIENLAFYDELTQLPNRRLFFDRVDMALAIAHRKNNKMA 454 Query: 282 LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSE 341 L F+D D FK +ND +GH GD +L AKRL E R+GGDEF ++L D++ Sbjct: 455 LFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVARIGGDEFTLLLTDMREV 514 Query: 342 SEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKH 400 + + C+ + + P+ + GH +T SIG A+ E + E+L + AD MY+AK Sbjct: 515 DHICKACNRIVEKLRQPYHI-EGHALNITTSIGIAVYPEDGTNEEELMKNADIAMYRAKD 573 Query: 401 QRAEKL 406 Sbjct: 574 IGRNSF 579 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R L + E ++ + R+ + + + + + ++ S+ ++ Sbjct: 399 FYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFSDISVI-- 456 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 + K QL A HD LTGL NR F + + + + R+ AL+F+D D FK IND Sbjct: 457 --KEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKIIND 514 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L +A+RL E RLGGDEF + L ++ + + L + Sbjct: 515 TMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLIETI 574 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 P + GH+ + SIG A+ A A+ L AD MY+AK Sbjct: 575 RQPVHIG-GHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRNTF 625 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 121/326 (37%), Gaps = 17/326 (5%) Query: 83 LGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGE 142 L + + V ++ + + ++ + + + + Sbjct: 375 LDGREHLLESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNL--------- 425 Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + ++ + L ++ + + + + + R Sbjct: 426 LFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLATAAGMEQMICSDTSYYREYLSPTREG 485 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 + + + I A + ++ + + + + + A HDP+TGL NR Sbjct: 486 KRWIGW-ALRCIFNQSGQAEAIIGMGRDITD----RKTAESTIEQLAYHDPVTGLPNRTL 540 Query: 263 FRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 + +N ++ A+LFLD D FK IND+ GHA GD++L + RL + Sbjct: 541 LHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSD 600 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 RLGGDEF +++ + ++ V + + + P+ + + H+ + SIG ++ Sbjct: 601 TVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDD-HEVYTSSSIGISLFPRD 659 Query: 382 A-SAEKLQELADHNMYQAKHQRAEKL 406 AE+L + AD MYQAK Sbjct: 660 GRDAEELLKNADMAMYQAKEAGRNTC 685 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 3/191 (1%) Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR 277 + + ++ Q L + L A HD LTGL NR F + + ++ Sbjct: 356 RHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERH 415 Query: 278 -KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 AL F+D DNFK IND+ GH GD+VL+ ++KRL RLGGDEF +++ Sbjct: 416 LGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTIIME 475 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNM 395 + + +V + + ++ N P + GH ++ SIG + + +A L + AD M Sbjct: 476 NFKDVQQVSVLAQKIQKVLNQPMHI-EGHTLYISCSIGISFYPQDTQNANDLVKYADAAM 534 Query: 396 YQAKHQRAEKL 406 Y+AK + Sbjct: 535 YKAKEEGRNNF 545 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 6/232 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R + + EA ++ + ++ + ++ + A + + ++ Sbjct: 848 FYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAVRNDQGKATHYVGISSDLS---- 903 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 +L+ A+ A +DPLT L NR RS + + + +L+LD D FK IND Sbjct: 904 QLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNIND 963 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + G+ GD +L+ + +RL RLGGDEF +VL + + + +L + Sbjct: 964 SLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETL 1023 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 PF LH + + SIG ++ AE+L + AD M+QAK Sbjct: 1024 AQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTY 1075 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + + + ++ + + + F S + + F ++ E Sbjct: 330 FYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQV- 388 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIND 295 +LR A +D LT L NR F+ + + ++ + +ALLFLD D FK +ND Sbjct: 389 ---EAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVND 445 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L E+A RL + RLGGDEF ++L ++ + ++ + + Sbjct: 446 TMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASL 505 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 + P + +G + SIG ++ ++ ++L + AD MYQAK + Sbjct: 506 HAPIFI-DGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRF 556 >UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR44_RHORT Length = 678 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 161/415 (38%), Gaps = 26/415 (6%) Query: 8 LNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAA 67 L K ++AL +S+ S+ +++ + + + + Y TA+++ L A Sbjct: 2 LGKFLAVQQAL-RVSLLSLAVSLGFLGMQTVWLASAADRDYLILR-DRTASSLQSGLSNA 59 Query: 68 VVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL--F 125 + D A ++ + + V D + A + + WL Sbjct: 60 LWNFDAETAKAIISDALRANPIRSIHVIDSNGRVFADGQSAQPVVAPSLWESYLGWLVDL 119 Query: 126 PAPIIQPIR--------HNGETIGEVRLTARDSSISHFIWFSLA-VLTGCILLASGIAIT 176 + + +R + G +G V +T I LA + G +++ +A+T Sbjct: 120 KSEMTLDLRFSSPTDDHYQGMVVGFVFITFDKDHFIRGIADRLADQVLGILVIVLVVALT 179 Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER---IAEFHRFALDFNSLLDEMEE 233 + H + + + V DV + ++ R E R N LL + E Sbjct: 180 TSIVFHLFISRPIIRVARGVADVDPEDPAATVLTVPRAHQRNEIGRMTNRLNHLLGRLAE 239 Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLDGDNFKY 292 Q L A DPLT L NR+ ++ +N + A++FLD D FK+ Sbjct: 240 VQGE-------LRLLATRDPLTDLPNRSLILEMMDATINRVALDGGRCAVMFLDLDMFKH 292 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 +ND+ GH GD +L +I +R RLGGDEF +++ + E ++ +I L Sbjct: 293 VNDSLGHEAGDLILKDIGRRFDAVVAGLGAVGRLGGDEFVVLIDRYEREDDLARIARRLI 352 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 P ++ +G + S+G A + A+ + L AD MY K + Sbjct: 353 TTVKRPIEV-DGTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASGPGQW 406 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 6/233 (2%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 + + L +A +V + RS + + ++ + ++ + ++ Sbjct: 623 LFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDIT--- 679 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYIN 294 +++ A+L A +D LTGL NR +S ++ + + A L+LD D FK +N Sbjct: 680 -QIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVN 738 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD +L+ +A RL + RLGGDEF +VL D++ +E + L + Sbjct: 739 DSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDL 798 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L +GH+ + SIG ++ A S +L + AD MY AK + Sbjct: 799 LATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTY 851 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 7/231 (3%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 R + L + ++ + ++ + + ++ + + ++ ++ ++ + Sbjct: 315 YRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVFSDIS----Q 370 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 ++ +QL R A +DPLTGL NRA + ++ + T A+LFLD D FK +ND+ Sbjct: 371 IKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDS 430 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GDR+L IA+RL R GGDEFA+VL DV V ++ L Sbjct: 431 LGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIA 490 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P DL +GH ++ SIG A+ A L + AD MY++K Sbjct: 491 RPLDL-DGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRNTF 540 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 132/333 (39%), Gaps = 13/333 (3%) Query: 80 LAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS----NFISHWLFPAPIIQPIRH 135 L + VRD I+A R + ++ + I Sbjct: 130 LQGTERYLAIDAGPVRDSSGRIIAVVETLRDRTSHKLAELRLRQMASVFEHSQEGIMITD 189 Query: 136 NGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDV 195 I + + A ++ + T +L + R L L E + ++ Sbjct: 190 PATRI--LDVNASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRDLNETGRWHGEI 247 Query: 196 VHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 + +S + + + + + + ++ + L+ ++L A +D LT Sbjct: 248 WNRKKSGELYPEILHINAVQDPSGRVTHYIGMFIDITD----LKNSQSRLENLAHYDVLT 303 Query: 256 GLANRAAFRSGINTLMNNSDARKTSA-LLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 GL NR + ++++ + A + FLD DNFK +ND GH TGDR+LI+I +RL Sbjct: 304 GLPNRLLLGYRLRQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLR 363 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 + RLGGDEF ++L D++++ E+ + L P + + Q +T+S+G Sbjct: 364 DTLRSNDTVARLGGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRI-DALQIVITVSVG 422 Query: 375 YAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 + + + L AD MYQAK + Sbjct: 423 VTIYPLDDHDPDTLLRHADQAMYQAKQMGRNRY 455 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 9/203 (4%) Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 ++ I E S++D + + A +D LT L NR F Sbjct: 347 DYYITLSPIEENGEIVEMVGSMID-----ITERKKAEETIRYMAHYDSLTNLPNRTLFHE 401 Query: 266 GINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 + M + + ++F+D D FK INDT GH+ GD +L +A RL Sbjct: 402 KLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVS 461 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA 384 RLGGDEFA+ L V +I + + L + + +T SIG +M + Sbjct: 462 RLGGDEFAIFLTGVTHRE-AGEIAQRIITSMSESITL-DHIEIFITPSIGISMYPDDGDD 519 Query: 385 -EKLQELADHNMYQAKHQRAEKL 406 E L + AD MY AK Q Sbjct: 520 IEALLKHADAAMYLAKEQGKNNY 542 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 14/260 (5%) Query: 149 DSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRR 208 D ++ + +A+L I++ ++ + ++N L LK I + + ++ S N+ R Sbjct: 310 DKTLRNNRQSLVAILFFIIIVTFITSLVI---INNMLSIPLKKILNGI-EIISKGNYENR 365 Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + E + FN++ DE+ + QL A DPLT + NR F + Sbjct: 366 IDITSKDELGAISSQFNNMADEIAKR-------ETQLDELAHVDPLTKIPNRVMFIETLE 418 Query: 269 TLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 ++ + A+ FLD D+FK +NDT GH GD++LIEIAK L+ R+G Sbjct: 419 KSISRAKRLNTKLAVFFLDLDDFKNVNDTLGHYVGDKLLIEIAKNLSIVMRESDTISRIG 478 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEK 386 GDEF +++ D++S S + +I + +P + N + T++ SIG ++ + Sbjct: 479 GDEFNILIEDLESLSHIGEIAEKFIKQMTIPLYIEN-NAITISGSIGISIYPDDGEDTTT 537 Query: 387 LQELADHNMYQAKHQRAEKL 406 L + AD MY+AK + Sbjct: 538 LLKNADLAMYKAKDNGRNQY 557 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 9/308 (2%) Query: 101 ILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL 160 + T + + +S +P I I + + IS + + Sbjct: 268 LFVMRDITERRKAEKQLKILSQACEQSPASIVITDVQGNI--TYVNPKFEEISGYKSAEV 325 Query: 161 AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRF 220 IL + + L + + ++ + R S I+ Sbjct: 326 LGRNPRILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASISPISNQQGI 385 Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT- 279 + ++ +++ + + + L A +D LTGL NR + + + ++ +K Sbjct: 386 VTHYVAVKEDITKE----KQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIESALRQKHI 441 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 L+FLD DNFK +NDT GH GD++L+E+++RL RLGGDEF ++L V Sbjct: 442 FGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIILDQVS 501 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQA 398 ++ I L ++ P +L G + + SIG + + A+ L AD MY A Sbjct: 502 HSRKLMAIAQRLLRVMRQPVNLQ-GLEFFVHGSIGITVFPDDGFHADVLLRNADTAMYAA 560 Query: 399 KHQRAEKL 406 K Sbjct: 561 KLAGRNMF 568 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 71/358 (19%), Positives = 135/358 (37%), Gaps = 18/358 (5%) Query: 60 MTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVR-----DKQQN----ILASWHYTRK 110 + +L A V+ T + + G+ A++ + + T + Sbjct: 199 LNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVEDITER 258 Query: 111 DPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLA 170 + + + + I + + + I+ F + +L + Sbjct: 259 KRLEDNMRLAATVFENSGDGLFVTDAENRI--IHVNPAFTRITGFTADEVLGRNPRLLAS 316 Query: 171 SGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE 230 L L+ K ++ + F+ + + + +F +++ + Sbjct: 317 GRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAVISD 376 Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDN 289 + + +L A HDPLT L NR F+ + + + ALLF+D D Sbjct: 377 ITT----RKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLDR 432 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH GD +L ++A+RL+ RL GDEF ++L DVQ + + Sbjct: 433 FKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAVVGH 492 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKL 406 + ++ P L G + ++ SIG ++ + L +LAD MY+AKH Sbjct: 493 KVLRLLQEPVALTGG-EAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRAKHLGRNSC 549 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 15/314 (4%) Query: 102 LASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 AS+ A I + + V + I+ + + Sbjct: 212 FASFTALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVL 271 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERI------- 214 I+ + T + + L +V + ++ + + ++ + Sbjct: 272 GKNPKIIKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCC 331 Query: 215 AEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS 274 E + + ++ + ++ +++ AQL + A +DPLTGL NR +S ++ + + Sbjct: 332 DESN--SCNYVGVFTDIS----QIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERA 385 Query: 275 DARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAM 333 +L++D D FK +ND+ GH GD +LI++A+R+ + RLGGDEF + Sbjct: 386 QRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLL 445 Query: 334 VLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELAD 392 VL DV+ + + +L + PF L +GH+ + SIG ++ E AS A +L + +D Sbjct: 446 VLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSD 505 Query: 393 HNMYQAKHQRAEKL 406 MYQAK + Sbjct: 506 MAMYQAKKEGRNTY 519 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 10/225 (4%) Query: 186 VEALKNITDVVHDVRS--NRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNA 243 +E+++ + + ++R+ + + +S E + + + + Sbjct: 362 MESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSIH-----IVRDVTESKKMED 416 Query: 244 QLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATG 302 ++ A HD LTGLANR F + ++ A++FLD D FK IND+ GHA G Sbjct: 417 EIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAG 476 Query: 303 DRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLH 362 D++L I+ RL E R+GGDE+ +++ + + I + + N PF + Sbjct: 477 DKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAI- 535 Query: 363 NGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +GHQ +T+SIG ++ AE L + AD +Y AK Q Sbjct: 536 DGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRNNY 580 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 10/282 (3%) Query: 133 IRHNGETIGEVRLTARDSSISHFIWF-SLAVLTGCILLASGIAITLTRHLHNGLVEALKN 191 I + +G ++ + S I + +A + +L G + + ++E L+ Sbjct: 317 ILADLAPVGILQANSDWSGIYANDRWCEIAGRSMSDILELGWLSAIHPDHFHNVIEPLRT 376 Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFH-----RFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + + F + SE+ E H D + + + +L Sbjct: 377 AISEGKEFKRECLFLKPNSEQTWVELHARPQISTNGDITGFIATILDSTF-RHEAEDKLR 435 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVL 306 A HDPLTGLANRA F+ + ++ + + ALL LD D FK +NDT GH +GD +L Sbjct: 436 ELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGSLALLCLDLDGFKNVNDTLGHDSGDELL 495 Query: 307 IEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQ 366 IE+AKRL + R+GGDEF ++L ++ ++ + P + N + Sbjct: 496 IEVAKRLTKCVREEDTVARVGGDEFMILLEGLKDAQIAAEVSEKILNSLEPPCSI-NRQE 554 Query: 367 TTMTLSIGYAMTI--EHASAEKLQELADHNMYQAKHQRAEKL 406 ++ SIG + ++ L + AD +Y+AKH+ Sbjct: 555 VFISTSIGITFATKGDKNDSKSLMKQADMALYRAKHEGRNNY 596 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 145/377 (38%), Gaps = 29/377 (7%) Query: 43 LTLKQYAQKNLALTAATMTYSLEAA-----VVFADGPAA-----TETLAALGQQGQFSTA 92 + Y + A+ +AA V D + L L Q + A Sbjct: 658 TGYRLYQRSPFQAVASFPIQPKQAAGALLVVYTQDKKLLEQDDEQQLLDELVQ--DVAFA 715 Query: 93 EVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSI 152 + + A + F N I + V + S I Sbjct: 716 LDVHEHEQQQAFSMKQLQLAATVFDNSREG----------IVLTDKNEKIVSVNRAFSDI 765 Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEE 212 + + + T IL ++ +++ + L E ++ + + + + +S Sbjct: 766 TGYRDDEVLGQTPRILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMS 825 Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 + + + + ++ ++ + + +L + HDPLT L NR+ F + ++ + Sbjct: 826 AVCDDQQEVSHYIAVFTDISQA----KESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVK 881 Query: 273 NSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEF 331 +++ + A+L D D+FK +ND++GH GD +L +IA RL RLGGDEF Sbjct: 882 HAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEF 941 Query: 332 AMVLYDVQSESEVQQICSALTQIFNLPFDLHN-GHQTTMTLSIGYAMTIEHA-SAEKLQE 389 ++L DV V + + P L + +++S+G A+ EH A +L + Sbjct: 942 VLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQ 1001 Query: 390 LADHNMYQAKHQRAEKL 406 AD +Y+AK + Sbjct: 1002 RADSALYRAKQHGRARF 1018 Score = 40.9 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Query: 157 WFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER--I 214 L I + G+A+ +T + L +TD + ++ R+++ + Sbjct: 302 RRVTGALVVIITVLGGLAMAITWVGLRSVTGPLAALTDHLRRFDQWQDTQRKIALQGHLS 361 Query: 215 AEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRT 248 +E + FN +L ++ + ++ K L Sbjct: 362 SEIKQLEEGFNHMLQVVDLQRDKIAEKVETLRLQ 395 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 6/207 (2%) Query: 202 NRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRA 261 + + R + + + + + + + A + A HD LTGLANR Sbjct: 340 GQRYPRTLMINGVRDPE--TREITHFIAIFSDITA-RKRAEADIQHLAYHDTLTGLANRF 396 Query: 262 AFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLR 320 + + + + + + A++FLD D FK+IND+ GH GD +L ++A+RL + Sbjct: 397 SLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRET 456 Query: 321 HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE 380 RLGGDEF +VL + +V + + L + P+ + + + T SIG ++ + Sbjct: 457 DTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCV-DTTELHTTASIGISLFPD 515 Query: 381 H-ASAEKLQELADHNMYQAKHQRAEKL 406 A L AD MY AK K Sbjct: 516 DSADPAALMRNADTAMYHAKAAGRAKF 542 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 + + + + A HD LTGL NRA + + + + + A+LFLD D Sbjct: 272 IARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDR 331 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +ND+ GH+ GD++L ++A+RL RLGGDEF ++L + V+++ Sbjct: 332 FKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPAIPDRPAVERVAQ 391 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF +HN H+ + +SIG A+ EH + E L + AD MY K Sbjct: 392 KCIDALEQPFMVHN-HRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEHGKGHY 448 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%) Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFHRFALDF--NSLLDEMEEWQLRLQAKNAQLLRTA 249 +++++ + + ++ R + + L+ + E + Q+ A Sbjct: 243 LSELLRLLEQGTSIQFELTLPRTDNLYSVHAFSPDHGLVATLFEDITERRKSEQQIQHMA 302 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 D LT L NR F + + ++ + A+LFLD D FK INDT GH+ GD++LI+ Sbjct: 303 YFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFKDINDTLGHSAGDQLLIQ 362 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 + +RL RLGGDEF +++ D+ + ++ L PF + G + Sbjct: 363 VTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLINAIQPPFLIA-GRELH 421 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +T SIG A+ + +AE L + AD MY +K + Sbjct: 422 VTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRY 460 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 3/224 (1%) Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 + V S+ +R + + L E+E L + ++L Sbjct: 604 LHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESKL 663 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDR 304 A HD LTGLANR + + M+N+ A+LF+D D FK IND+ GH GD Sbjct: 664 RYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDT 723 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L +A RL E RLGGDEF ++L +E+ ++ S + P + +G Sbjct: 724 LLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRI-DG 782 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 H+ +T SIG + L AD MYQAK Sbjct: 783 HELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYC 826 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 19/329 (5%) Query: 80 LAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGET 139 L+ L +G + V D A F + L I P Sbjct: 305 LSLLRGKGMTALVVVHDISGRRTAERQA------RLFERVFRNALEGICITDP------E 352 Query: 140 IGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDV 199 V + ++I+ + + +L + + LVE + ++ + Sbjct: 353 GIIVAVNPAFTTITGYPADDAVGQSPRLLKSHHHDSAFYEDMWRALVEEGRWEDEIWNRR 412 Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 R+ + +S I + ++ ++ L+AK +Q+ A HD LTGL N Sbjct: 413 RNGEVYPEWLSISAIPGPTGRTEYYVAVFHDIT----ELKAKESQIQHQAHHDALTGLPN 468 Query: 260 RAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 RA R + +N + + A+L +D DNFK +ND+ GH GD L + A+++ + Sbjct: 469 RALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVR 528 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 + R+GGDEF +VL DV+ E + Q+ L F P + H+ + S+G A+ Sbjct: 529 PQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQE-HELFVGASVGIALF 587 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + L AD M +AK Q + Sbjct: 588 PDDGDDPDTLVRNADIAMSRAKEQGKRRY 616 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 136/338 (40%), Gaps = 16/338 (4%) Query: 77 TETLAALGQQGQFSTAE--VRDKQQNI----LASWHYTRKDPGDTFSNFISHWLFPAPII 130 E+L + F + D I + T + + + A Sbjct: 937 EESLPLAAGERHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQLRLAALVFDRASEG 996 Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALK 190 + + I + + S+++ + + T +L + + + + + Sbjct: 997 VMVTDTEQRI--LTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPREFYAEMWDKVTRLGV 1054 Query: 191 NITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTAL 250 ++ + ++ + +S + + + +++ + ++ +++ ++ A Sbjct: 1055 WQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSDIT----KVRESQQRIEYLAT 1110 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEI 309 HD LTGL NRA F +N + +++ R++ ++F+D DNFK +NDT GH TGD++L + Sbjct: 1111 HDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQA 1170 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 A RL E RLGGDEF ++L + + L + + H+ + Sbjct: 1171 AMRLLECVRAEDTVARLGGDEFVVLLVN-ADRQQATLTAERLLTGLSTSYHFGE-HECFI 1228 Query: 370 TLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + SIG +M E A A L AD MY+AK Sbjct: 1229 SASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKNGF 1266 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 131/308 (42%), Gaps = 8/308 (2%) Query: 102 LASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 L ++ + S ++ ++ + + + + + + + I+ + + Sbjct: 338 LDNFDREVQRKAAEQSLQLAASIYENSSEGMMITDADNL-IMAINPAFTRITGYAMEDVI 396 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 IL + + + + N ++ K I ++ +S + + ++ + Sbjct: 397 GKNPGILKSGRHDMDFYQAMWNEILGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKV 456 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TS 280 +L ++ + + + R A D LTGL N F + + S + Sbjct: 457 HHRIALFTDIS----QKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPL 512 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 A++FLD D+FK +NDT GHATGD +L E A RL+ RLGGDEFA++L ++ Sbjct: 513 AVVFLDLDHFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSD 572 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 + ++++ + F+ PF L N +++SIG + A+ E L AD MY AK Sbjct: 573 QDSIERVNECILNKFSAPFQLGN-ELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAK 631 Query: 400 HQRAEKLV 407 + + Sbjct: 632 NSGRNRSC 639 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDN 289 + + Q+ A HD LT L NR F + + ++ + A+LF+D D Sbjct: 136 IGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDR 195 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK INDT GH GD++LI +A R RLGGDEF ++L +++S + ++ Sbjct: 196 FKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQ 255 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKL 406 + P D+H G + +T SIG + E A E+ L + AD MY+AK + Sbjct: 256 KILSAAIQPLDVH-GQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNY 312 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 137/342 (40%), Gaps = 14/342 (4%) Query: 68 VVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPA 127 +V +D L+ + +A + + +L + ++++ + + Sbjct: 234 LVVSDKDEIKGVLSLEHLIHEIESAYCSELE-KVLVQRDLALQHSQRNL--YLANKIIDS 290 Query: 128 PIIQP-IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLV 186 + I H+ TI + + + ++ + + IL + + + + + Sbjct: 291 SLDGIMITHSNSTIMQ--VNPAFTQLTGYKEHEVIGKCPSILSSGRHDKSFYIKMWDAIN 348 Query: 187 EALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 + ++ + ++ + ++ I E + + ++ ++ + +++ Sbjct: 349 KTGVWQGEICNRKKNGDIYIEWLTIIEIKEPNNSDAIYAAIFSDIT----ERKNAEDKIV 404 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRV 305 + A D LTGL NR F + + + + A++F+D D FK +ND+ GH+ GD + Sbjct: 405 QLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCL 464 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L +A R+ RLGGDEF ++ + V + + N PF L + Sbjct: 465 LTLVAARIEATLNEGDTLARLGGDEFVVLCE-INKIDAVASLADKILNNLNSPFQL-DHV 522 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +T SIG A+ + +E L + AD MY++K Sbjct: 523 EVGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDVGRNSF 564 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 3/187 (1%) Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTS 280 +++ ++ Q K + A HD LT L NRA F +N ++N+ + Sbjct: 421 EAVLAMMAVSISGAIQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKL 480 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 ++LFLD D FK INDT GH+ GD++L +A RL R GGDEF ++L + Sbjct: 481 SVLFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQ 540 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAK 399 ++V + + PF L N H+ +T SIG A+ E L + AD +YQAK Sbjct: 541 VNDVAKTAQRMLSALEQPFHLEN-HELYITPSIGIAIYDLDGHDGETLIKHADMALYQAK 599 Query: 400 HQRAEKL 406 Sbjct: 600 QLGRNTY 606 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 14/318 (4%) Query: 95 RDKQQNIL----ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDS 150 D N + TR + + + I + V + Sbjct: 343 FDAHGNAVYAIGTVRDITRYKQEEATLRLAARVFDSSGEAILITDENVRV--VAVNHSFV 400 Query: 151 SISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVS 210 ++S + + +L + R + + + + ++ +S R + + +S Sbjct: 401 AMSGYRSEEVMGKNPRMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMS 460 Query: 211 EERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTL 270 + + H +++ S+ + E + A +D LTGL NR R + + Sbjct: 461 ITAVRDEHGKVVNYISIARDTTEQT----EAEKNIHFLAYYDVLTGLPNRTLLRDRLGQM 516 Query: 271 MNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGD 329 + + +L+FLD D FKYIND+ GH+ GDR+L +A R+ + RLGGD Sbjct: 517 IAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGD 576 Query: 330 EFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQ 388 EF ++L + ES + L P+DL +G + SIG ++ + A A+ L Sbjct: 577 EFIVLLRE-AGESAASVVAQKLLIALATPYDL-DGQVISTQASIGISIYPDQAQDADTLI 634 Query: 389 ELADHNMYQAKHQRAEKL 406 + AD MY+AK + Sbjct: 635 KNADMAMYRAKEEGRNNF 652 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 9/335 (2%) Query: 78 ETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFP--APIIQPIRH 135 +T+ G+ Q +++ D QN + + + I Sbjct: 146 QTIEVDGRHLQIIVSDITDAHQNSIKKVVICFDVTQQKKTEASLGLYGKVFESTAEGIAI 205 Query: 136 NGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDV 195 + +++ I+ + L T +L + + L ++ Sbjct: 206 TDSRMRFLQVNEAYCRITGYSDGELLGRTPRMLKSGHHDAAFYADISKTLEVRGHWRGEI 265 Query: 196 VHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 + R R + + + + +++ ++ + ++L A HDPLT Sbjct: 266 LDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTDISSI----KETQSRLDFLAHHDPLT 321 Query: 256 GLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 L NR F + + ++ + + LLF+D D FK IND+ GH GDR+L+++A+RL Sbjct: 322 ELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDSLGHQLGDRLLVQVARRLR 381 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 RLGGDEF +++ + + E + + L PF L + + SIG Sbjct: 382 GLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMRQPFFLEE-TELHIGCSIG 440 Query: 375 YAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLVR 408 + E L + AD MY+ K + + Sbjct: 441 ITLYPEDGEDPVTLLKNADAAMYRVKDFGRDGFCK 475 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 3/183 (1%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM-NNSDARKTSALLF 284 ++ + + +L+ A HD LTGL NR F + + + K A+++ Sbjct: 411 QVICMVLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIY 470 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D FK INDT GH TGD +L E+A RL RLGGDEF +++ ++ + ++ Sbjct: 471 LDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADS 530 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRA 403 + + +F+ PF L H+ +T S+G + AEKL + AD MY AK + Sbjct: 531 LLVAEKILHVFSAPFRL-EKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGR 589 Query: 404 EKL 406 Sbjct: 590 NTY 592 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 7/266 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + + ++ + + T IL + + + L K +V + ++ Sbjct: 342 LSVNPAFTEMTGYTAQEVVGKTPKILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNG 401 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 +++ ++ + I H + +L ++ + + + R A D LTGL NR Sbjct: 402 ESYAEWLTIDTIYNEHGEVIRRVALFSDITKN----KQNQEVIWRQANFDQLTGLPNRRM 457 Query: 263 FRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 +N + +D + A+LFLD D FK +NDT+GH GD++L E A RL Sbjct: 458 LHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECD 517 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 RLGGDEF ++L +Q + VQ I ++ + F+ PF L N +++SIG + E Sbjct: 518 TVARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDNDLT-HVSVSIGITIYPED 576 Query: 382 ASA-EKLQELADHNMYQAKHQRAEKL 406 +A E L + AD MY AK+ + Sbjct: 577 GNAGEVLFKNADQAMYVAKNNGRNRY 602 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 7/255 (2%) Query: 152 ISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSE 211 I+ F + I+ + + + + + ++ +V + + R + ++ Sbjct: 233 ITGFTAEEVIGKPTSIVTSIRHSTKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNI 292 Query: 212 ERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLM 271 L + + + + R A +D LTGL NR F ++ + Sbjct: 293 SS---VLSKKGSICYYLINFSNITDK-KKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDI 348 Query: 272 NNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 N+ A+LF+D D FK +ND++GH+ GD +L+E AKRL RLGGDE Sbjct: 349 KNAARTGMLLAVLFIDLDRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDE 408 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQE 389 F ++L + + ++I + PF L N +T SIG SAE L + Sbjct: 409 FTIILNGINDQHCAERIIQMILLELTKPFHL-NAKLAYVTASIGVTFFPADAGSAEILMK 467 Query: 390 LADHNMYQAKHQRAE 404 AD MY AK+ Sbjct: 468 NADQAMYAAKNNGRN 482 >UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3D1_GEOSF Length = 934 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 10/220 (4%) Query: 192 ITDVVHDV--RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + V R ++ + ++ E+ R + + + + A Sbjct: 440 LVHTAERVVERDGEKLYLEITASPLFDYDGRINA----GIEVVRNISRRKQMESAIEQMA 495 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGL NR F + + + A++FLD D+FK IND+ GH GD +L E Sbjct: 496 FHDALTGLPNRRLFNERLAQAIAYAQRNDQFLAVMFLDLDHFKDINDSLGHTIGDELLKE 555 Query: 309 IAKRLAEF-GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQT 367 +A RL R GGDEF + L +++ + + + + L Q PF L G++ Sbjct: 556 VATRLKRCGRRAEDTIARQGGDEFLLFLSEIKDKEDAVHLAALLLQEMTAPFILS-GYEL 614 Query: 368 TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +++SIG ++ E L AD MY+AK Q + Sbjct: 615 FVSVSIGISIYPHDGRDVETLASNADIAMYRAKQQGRNSV 654 Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 33/114 (28%) Query: 128 PIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVE 187 ++ RH T + + + + ++I + L Sbjct: 252 RVLTTYRHLRATNWILGANYPLKEAYAPVEQAKFYVALASFFGIILSILVVWLGMRYLTM 311 Query: 188 ALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK 241 L N+ + + + V E L FN LLD + + Q L+ Sbjct: 312 PLLNMARHIRSMHGEPGKTSPVEVLSEDEIGELGLAFNDLLDRVGKEQEALREA 365 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 4/184 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLF 284 ++ + + + + +LL A +D LTGL NRA ++ ++ S KT LLF Sbjct: 140 RMVGSIGDITEQ-KEYQDKLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKTSVGLLF 198 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D DNFK INDT GH GD L EI+ RL RLGGDEF ++L D+ S +V Sbjct: 199 VDLDNFKKINDTLGHEVGDLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDLDSPKQV 258 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRA 403 +++C + P + NG++ + + SIG + + L AD MYQAK Q Sbjct: 259 EEVCERILATAMQPVTI-NGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQAKAQGK 317 Query: 404 EKLV 407 + Sbjct: 318 DTFC 321 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 126/310 (40%), Gaps = 9/310 (2%) Query: 99 QNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWF 158 ++ + K + N + A I I + + + I+ + Sbjct: 710 GVVVTYIDISDKRQAEERLNLAASVFTHAREGIMITDKHARI--LDVNKGFTQITGYERE 767 Query: 159 SLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH 218 + L IL + + + L E ++ + ++ + + ++ I Sbjct: 768 EVLGLNPNILNSGCQSKEFYNLMWKTLFEEGHWSGEIWNRNKNGTVYPQMITITAIKNSD 827 Query: 219 RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK 278 ++ +L ++ L+ + QL A +D LT L NR+ + + S Sbjct: 828 GMTQNYLALFTDITS----LKEQQRQLEHIAHYDALTQLPNRSLLADRLQQAIFASQRHN 883 Query: 279 TS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYD 337 + A+LF+D D FK +ND GH GD +L+E++KR+ R+GGDEF +VL + Sbjct: 884 SLLAVLFIDLDGFKKVNDLHGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVN 943 Query: 338 VQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMY 396 + + S+ + I L + + D+ G +++ SIG ++ A+ L AD MY Sbjct: 944 LDAPSDCEMILRRLLESTSESVDI-EGEVVSVSASIGVTFYPKDNVDADLLMRHADQAMY 1002 Query: 397 QAKHQRAEKL 406 QAK + Sbjct: 1003 QAKQSGKNRY 1012 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 4/183 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLF 284 ++ + + AQ+ A +D LTGL NR F + + L+F Sbjct: 197 RMIGTHTDITN-RKRSEAQVTHLAHYDQLTGLPNRVLFLDRFKQDIKKAQRTGQIVTLMF 255 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 LD D FK +ND+ GH GD +L ++A+RL R+GGDEF ++L D+ S+ + Sbjct: 256 LDLDKFKEVNDSLGHDIGDMLLKDVARRLENCVRDSDTVARMGGDEFTIILNDINSQVNI 315 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRA 403 ++I + +PF L + ++ SIG + + E L + AD MY AK Q Sbjct: 316 ERIAQDILNQLTMPFHLGD-EVIHVSTSIGISNYPKDDTEVELLLKNADQAMYVAKEQGR 374 Query: 404 EKL 406 + Sbjct: 375 NRY 377 >UniRef50_C5V740 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Gallionellaceae RepID=C5V740_9PROT Length = 565 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 78/386 (20%), Positives = 155/386 (40%), Gaps = 21/386 (5%) Query: 24 TSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAAL 83 S++I +LI L LS L ++ ++N+A + ++ D L Sbjct: 192 RSLWIGHLLIQLFLSWLIWLFVRNLIERNIADPVKKLKLTMAEIQHNND----------L 241 Query: 84 GQQGQFSTAEV-RDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGE 142 ++ S T + + + + I + I Sbjct: 242 SKRADVDERNPDIGDMARSFNSLLGTLEQANERLE-LFAKMFENSSEAIIITDADKRI-- 298 Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + I+ + + IL + + + + + A K ++ + ++ Sbjct: 299 LTVNPAFELITQYRSEEVIGCDPKILSSGKQTAEYYQAMWSTIEAAGKWSGEIWNRRKNG 358 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 + + +S + + +++ SL ++ + + ++ A +D LT L NRA Sbjct: 359 EVYPQWLSIGAVKNHNGKVINYISLFSDIT----QRKEDEHRIEMLAHYDVLTKLPNRAL 414 Query: 263 FRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 F + + +D + L+FLD D FK INDT GH GD++L +A+RL+ Sbjct: 415 FADRLQHALQVADRSHRKVGLMFLDLDKFKAINDTLGHLAGDQLLQSVAERLSRCVRQSD 474 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 R GGDEF ++L ++ S +++ + + ++P + + ++ SIG A+ +H Sbjct: 475 TVCRQGGDEFMILLEEIHSPLDIEGVAQKIALEMSMPHQMGEESRV-VSFSIGAAIYPDH 533 Query: 382 A-SAEKLQELADHNMYQAKHQRAEKL 406 A +EKL + AD MYQAK Sbjct: 534 AIDSEKLSQCADQAMYQAKEAGRNNF 559 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 7/205 (3%) Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 R+ A R A + L+ M + QL A+HD LTGL NR Sbjct: 1001 ETRIWNFSSAPLGRLADN-RRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLD 1059 Query: 266 GINTLMNNSDARKT--SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKA 323 I + + + ALLF+D D FK +ND+ GH GD++L IA +L Sbjct: 1060 RIEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTV 1119 Query: 324 YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE--H 381 R GGDEF ++L ++ S +E ++ +T F L G +++SIG Sbjct: 1120 ARFGGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQ-GQDFFISVSIGIT-FPSSYE 1177 Query: 382 ASAEKLQELADHNMYQAKHQRAEKL 406 SA +L AD MY+AK + + Sbjct: 1178 ESASELLRNADIAMYRAKEKGRARY 1202 >UniRef50_B3E8F7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E8F7_GEOLS Length = 461 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 6/233 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R L L+ + + + + F S I + F + ++E Sbjct: 218 FYRELWAVLLRGEEWRGEFHNKRKDGSLFWEMASISPILNNKGEIISFVA----VKENIT 273 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + +L + A D LTGL NR F ++ + + + ALLF+D D FK IND Sbjct: 274 ERKELRDRLEQMAQFDMLTGLPNRRMFLDRLSQTVAIAQRTEQRFALLFVDLDGFKRIND 333 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 ++GH GDRVL +A RLA + R+GGDEF ++L + + Q+ + Sbjct: 334 SYGHEAGDRVLKTVAARLAACIRMSDTVGRMGGDEFTIILSTLAHYEDAGQVADKILDAL 393 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + P L +G Q T+ SIG ++ E A + L AD MY+ K Sbjct: 394 SRPITLPDGQQDTVGSSIGISVFPEDAQDGDGLLATADDAMYKVKRNGKNSYC 446 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 8/211 (3%) Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 F VS RF+ N LL + + + +L A HDPLT L Sbjct: 488 RRLDGSLFWVEVSMR----LARFSDGQNRLLVVVRDIT-ERKNAQDRLEFMAHHDPLTEL 542 Query: 258 ANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF 316 NR + ++ + ++ + AL+FLD D FK +ND+ GHA GDR+L ++A RL + Sbjct: 543 PNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQC 602 Query: 317 GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA 376 RLGGDEF +VL V+ V ++ + + P + G + T TLS+G A Sbjct: 603 VRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITI-EGQEVTSTLSMGIA 661 Query: 377 MTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 M E + L + AD MY AK Sbjct: 662 MFPEDGHDFDTLMKKADAAMYHAKESGRSTY 692 >UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXR7_HALHL Length = 749 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 10/272 (3%) Query: 138 ETIGEV-RLTARDSSISHFIWFSLAVLTGCILL-ASGIAITLTRHLHNGLVEALKNITDV 195 + G V + + I+ + T C LL + + + L + ++ Sbjct: 208 DPDGHVQTINNAFTRITGYTEGEALGNTVCALLDSGRHSEAFHKEKQESLDRSGYWQGEI 267 Query: 196 VHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 H + + ++ RI + F ++ ++ +L+ +++ A HDPLT Sbjct: 268 WHRRKGGELYPEWLTINRIDDATGQPQHFVAVFSDIT----QLKDAHSRSEYLANHDPLT 323 Query: 256 GLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 GL NR+ F+ + + + L+FLD D+FK INDT GH GD +L+++A+RL Sbjct: 324 GLPNRSLFQDRLQQAIAQTQRHEGQVGLMFLDLDHFKTINDTLGHEVGDELLVQVAERLG 383 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG 374 E R+GGDEF +VL D EV I L + F + +G + T S G Sbjct: 384 ELVRDVDTVARIGGDEFTVVLTDC-DPEEVGSIAQRLVEGLGGTFVV-DGRELQATPSAG 441 Query: 375 YAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 A+ L + AD MY+AK + Sbjct: 442 LALYPRDGEDVHTLCKAADMAMYRAKEDGRNR 473 >UniRef50_Q2W736 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W736_MAGSA Length = 459 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 8/230 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH-RFALDFNSLLDEMEEWQLRLQ 239 L + K + V + + R E ++E F +L ++ + Sbjct: 215 FGQYLSGSAKLMGRSVESMGYRADGGRFPMEISVSELRYGKGRLFTGILRDIS----ERK 270 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWG 298 ++ R A HD LTGL NR I+ + A+L++D D FK INDT G Sbjct: 271 ENEERIKRLAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLDKFKPINDTLG 330 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD VL E+A+RL R+GGDEF +V+ ++ E + + + P Sbjct: 331 HEAGDAVLKEVARRLDNCVRSSDTVSRVGGDEFVVVVEEIGRPGEAAMVARKIIEALGTP 390 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 + H + SIG A+ + + E++ + AD MY+ K+ Sbjct: 391 VPYED-HSCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVKNSGRNGYC 439 >UniRef50_C5V5L2 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5L2_9PROT Length = 560 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 7/232 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 R L L ++ + ++ + + +++ + H + + ++ Sbjct: 321 FYRQLWAQLTCTGSWCGELWNRRKNGELYVEWSTIKQVRDPHGKLTHYVAAFSDIT---- 376 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIND 295 +A + A HD LT L NR + ++ + K AL++LD D FK +ND Sbjct: 377 LRKADEENIRHQAQHDALTDLPNRVLLIDRLRQALSLAKRDKMHLALMYLDLDQFKPVND 436 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GHA GD +L E+A R+ R+GGDEF ++L + + + + + Sbjct: 437 TLGHAVGDLLLQEVAARIRSCVREADTVARMGGDEFVVLLTSSEDQRDALTVAEKIRIAL 496 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKL 406 F + G + ++ S+G A+ EH ++E +L E AD MY AK ++ Sbjct: 497 EQVFQIS-GARLQISSSLGVAVYPEHGASEHELLEHADIAMYYAKQSGRNQV 547 >UniRef50_A0L7S5 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S5_MAGSM Length = 571 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 8/290 (2%) Query: 120 ISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTR 179 ++ +F + + E I V + S I+ + + + +L + + Sbjct: 277 LAAKIFNHSQEGLVVLDAERI-IVDVNPAFSYITGYTREEVIGRSPELLRSQRHDAAFYQ 335 Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQ 239 + ++ ++ F +S I ++ + L ++ + Sbjct: 336 SIWQQAENQGNWQGEIWRRRKNGEEFPEWLSLSIIRGENQQISHYIGLFSDITT----RK 391 Query: 240 AKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWG 298 +L A HDPLTGL NR+ + ++ + A+L++D D+FK +ND +G Sbjct: 392 IAEEKLKHQAHHDPLTGLPNRSLLEDRLQQAVSKARRYEGKIAVLYIDLDHFKPVNDNYG 451 Query: 299 HATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLP 358 H GD VL EI+ R+ A R+GGDEF VL +++ E V + L P Sbjct: 452 HEAGDAVLREISARIRYELRQSDTAARVGGDEFVAVLTEIREEHLVMGVAQKLIHAIQKP 511 Query: 359 FDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKLV 407 + N + SIG ++ H ++ L + AD MY+AK + + Sbjct: 512 VNFGN-ESFQVGCSIGISLYPIHGNSITKLLKSADTAMYRAKQEGRNRFC 560 >UniRef50_Q2W523 FOG: PAS/PAC domain n=5 Tax=Magnetospirillum RepID=Q2W523_MAGSA Length = 642 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 118/325 (36%), Gaps = 19/325 (5%) Query: 84 GQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEV 143 + + A + D + A + + + + + Sbjct: 325 FENEPVNLAWIYDITERKAAE------------QQILLAAKVLETVTEAVVITDADNRII 372 Query: 144 RLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNR 203 + ++I+ + + L + L L + ++ + +S Sbjct: 373 FVNPAFTTITEYTKEEVRGKNPSFLSSGRHDPEFYAGLWQVLSVSGHWAGEIWNRRKSGA 432 Query: 204 NFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAF 263 ++ +S + + F ++ ++ + ++ R A +D LTGL NR+ F Sbjct: 433 FYAEWLSINALRDVSGAITHFVAVFSDIT----HRKEDEERIWRQANYDALTGLPNRSLF 488 Query: 264 RSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK 322 +N + S K AL+FLD D FK +NDT GHA GD +L + A RL + Sbjct: 489 VDRLNQAVRQSKRDKKRFALMFLDLDGFKAVNDTLGHAAGDVLLQQTAARLHQCMRATDT 548 Query: 323 AYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH- 381 RL GDEF ++L V + + + P+DL G + SIG A+ E Sbjct: 549 LARLAGDEFVVILEGVHDRDNPALVAGKILATLSKPYDLEVG-TAHVRGSIGIALYPEDA 607 Query: 382 ASAEKLQELADHNMYQAKHQRAEKL 406 A L AD MY K + Sbjct: 608 ADGPALIRRADTAMYAVKRRGKNSF 632 >UniRef50_B7VQL7 GGDEF family protein n=2 Tax=Vibrio RepID=B7VQL7_VIBSL Length = 728 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 76/463 (16%), Positives = 156/463 (33%), Gaps = 87/463 (18%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA------- 66 + + + ++ + ++ + LS++ L Y+ + L TA + + + Sbjct: 2 LMKLKGKLVLGNMLMVVLTMG-CLSLSQWLISSYYSDEILEETATNIAENFTSQAQSQAE 60 Query: 67 ------------AVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL------------ 102 + F D L + +V D I+ Sbjct: 61 QTVEYLSDALFDPMYFYDIDNINSILEPAFENKDVIFIKVFDANGLIVHTGEDVVLGYGS 120 Query: 103 -ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 +++ + + + +PI N +G + ++ ++ I + Sbjct: 121 NLDMPRVQENVLNKQEAYTEINSSALIVARPITMNKTRLGGIVMSYSLKAVKDDIEKNNT 180 Query: 162 VL---------------TGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFS 206 ++ + +++ + L ++ + + + S F Sbjct: 181 IIKDITESSRSYSAVLSITLTMFMCLVSLLFSMLLAKTMIRPINQLLQHSKRI-SKGIFQ 239 Query: 207 RRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSG 266 + +R E A F+S+ L+ +N ++ A +DPLT L NR+ F Sbjct: 240 VPNNIQRSDELGELAQAFDSMDSS-------LKQRNEEVEFLAYNDPLTKLPNRSQFIKC 292 Query: 267 INTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLR----- 320 + ++ K A+ F+D D FK +ND GH GD +L E+A+ L Sbjct: 293 LERCIHRCKQSKEVFAVFFIDLDEFKRVNDNLGHQAGDELLSEVAQTLTNSLKKMGQIAT 352 Query: 321 -H----KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG- 374 R+GGDEF + L ++++ V + S + P L S+G Sbjct: 353 KDEPQCMIARVGGDEFLLRLSGIKTQDTVSKFASDIVNSLKQPIYLS---------SVGE 403 Query: 375 ---------YAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 A+ + ++E L + AD MY AK + Sbjct: 404 SVVVGASVGVALYPDSGNTSEDLVKSADMAMYSAKENGKGRYC 446 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 78/363 (21%), Positives = 144/363 (39%), Gaps = 16/363 (4%) Query: 54 ALTAATMTYSLEAAVVFADGPAATETLAALGQQG---QFSTAEVRDKQQNIL----ASWH 106 A S +AA+ + ET+ + + + ++++ Q ++ S Sbjct: 451 DEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKLKNAQGEVVGLIGISKD 510 Query: 107 YTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGC 166 T K + + I + I + + S I+ + L Sbjct: 511 ITNKRQQEEDLKLADIVYQNSSEAMMITDSKNEI--IAINPALSEITGYSSSELIGKNPN 568 Query: 167 ILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNS 226 + + + + + ++ + ++ + + +S I + + + Sbjct: 569 VFSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRIA 628 Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFL 285 L ++ + K+A +LR A +D LT L NR F + + S + AL+F+ Sbjct: 629 LFSDIT----EKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFI 684 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D DNFK INDT GH GD +LIE KR+ RLGGDEF ++L D+ V+ Sbjct: 685 DLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVE 744 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 IC + Q + PF + + ++ S+G + AS+ +L + AD MY AK+ Sbjct: 745 SICQKVLQTLSEPFFISKMYT-YISASLGVTIYPNDASSTLELLKNADQAMYLAKNLGRN 803 Query: 405 KLV 407 + Sbjct: 804 RFC 806 Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 1/93 (1%) Query: 154 HFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER 213 L V G I + LH + ++ ++T V + RV+ + Sbjct: 309 KQANTQLIVSIGFSSALFLIVLYFIIGLHLSTIRSINSLTKVTGKFY-GGDLDARVTLDT 367 Query: 214 IAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLL 246 E + AL FN + + + + +++L Sbjct: 368 HDELNNIALGFNEMATSFQNLMIDKEEISSRLR 400 >UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CD40_ACAM1 Length = 1197 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 6/178 (3%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNF 290 E + LL ALHD LT L NR F + + + A+LFLD D F Sbjct: 455 EDASERKQTEQALLHDALHDGLTQLPNRVLFMDRLEQACRSFQRHPDEIFAVLFLDLDRF 514 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K INDT GH GD++L+ +A RL RLGGDEF ++L ++ + I Sbjct: 515 KIINDTLGHMVGDQLLVAVAHRLQTCLRPEDTVARLGGDEFTLLLPNIDQAEDAMHISDR 574 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMT--IEHASAEKLQELADHNMYQAKHQRAEKL 406 + Q PF L + + +T+SIG AM+ E + L AD +Y+AK Sbjct: 575 ILQSLKEPFTL-DHTEVFITVSIGIAMSGNPE-QKPDDLLRHADIALYRAKANGKGCY 630 >UniRef50_A8ZV29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV29_DESOH Length = 458 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 3/176 (1%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFK 291 + R + ++ + A HD LTGL NR F + + + + A + LD DNFK Sbjct: 276 QDITRRKQTEEEIQKMAYHDALTGLPNRKLFSDRLGIALAQARRDQKGIAAIILDLDNFK 335 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 +NDT+GH GDR+L A+RL+ RLGGDEF ++L D++ +V ++ + Sbjct: 336 DVNDTFGHDVGDRLLQAAAERLSAALRKSDTVARLGGDEFVLILPDLKGTEDVDRVAQKI 395 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEK-LQELADHNMYQAKHQRAEKL 406 F PF + + HQ +T SIG A+ +E L + AD MYQ K Sbjct: 396 VDGFRNPFSI-DTHQLIVTTSIGIAVYPRDGISEVLLLKHADIAMYQVKQAGRNGY 450 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 3/181 (1%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLD 286 ++ + + ++ A +D LTGL NR + + N+ ALLF+D Sbjct: 258 ASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVD 317 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK +ND+ GH GD++L +A+R+ R+GGDEF ++L +++ ++ + Sbjct: 318 IDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSRIETATDAAR 377 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 L + P+ + H+ +T SIG ++ ++ A L AD MY AK Q + Sbjct: 378 SAEKLITSISQPYQIEE-HELLLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNR 436 Query: 406 L 406 Sbjct: 437 Y 437 >UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVN0_DESAC Length = 635 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 118/294 (40%), Gaps = 11/294 (3%) Query: 116 FSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAI 175 +++ + + +IQ +R +G + + ++ + L +++S Sbjct: 80 QEHYLDLFENASDLIQSVRLDGSI---LYVNRAWKETLGYLDHDIPSLNIFDVISSADRP 136 Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 + + L A +V + R + + + + + Sbjct: 137 ICRNRVISLLDGAELGPIEVTFQCKDGRAVLLEGNISLRQDEGQP-----HSVRGIFRNI 191 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIN 294 + ++ + A +D LTGL NR + + + ++ A++F+D D FK +N Sbjct: 192 SERKQAEQKIHQLAYYDTLTGLPNRVLLQDRLIHAIADARRFSHYLAVMFIDLDQFKKVN 251 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH+ GD +L + A+RL A RLGGDEF ++L + S + I + + Sbjct: 252 DTLGHSVGDLLLKDAARRLRSCLRDNDTAARLGGDEFVVILSGFKQISNLPHIARKVLDV 311 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKLV 407 + P+ L + ++ S+G ++ + AE L AD MY AK+ Sbjct: 312 LSQPYFLAE-RELVVSASLGISVYPQDGDNAELLMRNADMAMYAAKYDHGNGYC 364 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 18/283 (6%) Query: 135 HNGETIGEVRLTARDS-SISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 + G + L S ++++ + + L+ + +++GL +K + Sbjct: 946 FGNTSEGVLILDVEGSIRVANYAAQQIIGIDSTDLVGQSFTQFV--QMNDGLASEIKQLL 1003 Query: 194 DVVHDVRSNRNF--------SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQL 245 R ++ + + + + ++ + A L Sbjct: 1004 SDSQSWTGERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDIT----ERKQTEADL 1059 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDR 304 R A +D LTGL NR+ F S + + + + ALLFLD D FK++ND++GH+ GD Sbjct: 1060 RRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDA 1119 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L+E + RL H R GGDEF ++L + S ++ I L + PF L+ G Sbjct: 1120 LLVEASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQIVAPFKLY-G 1178 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + ++ SIG ++ + A E + AD MY AK + Sbjct: 1179 REFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGNF 1221 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 20/238 (8%) Query: 180 HLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE--------- 230 H + +++AL H ++RR + E N + D Sbjct: 584 HFYQQMLQALDE-----HGFWRGEMWNRRQNG----ELLPMMTSINPVCDSNGEILYYIS 634 Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDN 289 + +L+ A+L ALHDPLTGL NRA +++ + ++ ALL LD D+ Sbjct: 635 IYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDH 694 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +ND++GH GD +L +++ RL + RLGGDEF ++L + S +V + Sbjct: 695 FKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAE 754 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + PF L N + + SIG ++ EH +AE+L + AD MY+AKH + Sbjct: 755 RIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGY 812 >UniRef50_A1K923 GGDEF/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K923_AZOSB Length = 1255 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 125/319 (39%), Gaps = 13/319 (4%) Query: 94 VRDKQQNILA----SWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARD 149 +RD + A + T++ + + A I I V + Sbjct: 916 LRDASGEVTAILSVARDVTQRRDSEAQLRLAATVFTHAHEGIAICDAERRI--VDVNPTF 973 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 I+ + + +L + L+ + + ++ + + +++R+ Sbjct: 974 CEITGYSRQEAIGASLALLNSGEDRQALSPDMWQTVARRGHWEGELWNLRKDGTEYAQRL 1033 Query: 210 SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT 269 + + + + ++ + + QL A +DPLTGL NR+ + Sbjct: 1034 TISAVYDAGGTPTHYIGTFSDITFV----KRQQEQLEHLAHYDPLTGLPNRSLLADRLQL 1089 Query: 270 LMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 + + ++ A+ +LD D FK +ND GH GD +L+EI +RL + RLGG Sbjct: 1090 ALAQARREESAVAVCYLDLDGFKAVNDELGHQAGDLLLVEIGRRLKDCVRAGDTVARLGG 1149 Query: 329 DEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKL 387 DEF ++L DV + E Q S + P + ++ +++ SIG A+ + E L Sbjct: 1150 DEFVLLLLDVAGQEECIQAVSRVLAAIARPVTIAGEYR-SVSASIGIALFPDDDDEPEVL 1208 Query: 388 QELADHNMYQAKHQRAEKL 406 AD MY AK + Sbjct: 1209 LRHADQAMYLAKQRGKNCY 1227 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 115/318 (36%), Gaps = 13/318 (4%) Query: 95 RDKQQNIL----ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDS 150 + L S T + ++ + + I I + + + Sbjct: 427 YGRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKI--LTVNPAFT 484 Query: 151 SISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVS 210 ++ + L A + NG+ E ++ + + + +S Sbjct: 485 RLTGYTSEEAVGRDPSFLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMS 544 Query: 211 EERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTL 270 I + ++ +A +L A HD LTGL NR + + ++ Sbjct: 545 ISVIRGEDGMIRYHVAHFTDVSSE----RAAEERLHHMAHHDVLTGLLNRLSLKGRLDQA 600 Query: 271 MNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGD 329 + + A+LF+D D FK INDT GH GD +LIE+A RL + R+GGD Sbjct: 601 LAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGD 660 Query: 330 EFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQ 388 EF ++L V+ S V + L + + G+ T SIG A+ + L Sbjct: 661 EFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIG-GYDLYSTPSIGIAIYPTDGEDGDILM 719 Query: 389 ELADHNMYQAKHQRAEKL 406 + AD MY AK Sbjct: 720 KNADAAMYHAKMAGRNNF 737 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 7/231 (3%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 +H + E + +V ++ F ++ + + +L ++ Sbjct: 514 YEQMHMAVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDIT----E 569 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDT 296 + + + A +D LTGL NR +N + SD + AL+FLD D FK +NDT Sbjct: 570 KKQAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDT 629 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH GD +L E AKRL RLGGDEF +VL V V ++ + Sbjct: 630 LGHDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIA 689 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P++L ++ SIG + + A + E L + AD MY AK + + Sbjct: 690 EPYNLGE-ETAYISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNRF 739 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN--SDARKTSALLFL 285 +D ++ + +L A HD LT L NR+ F + + A+LFL Sbjct: 774 IDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLGHALQRNLRRRDLRFAVLFL 833 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK IND+ GH+ GD +L IA RL + RLGGDEF M++ ++ +V Sbjct: 834 DLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPEDTLARLGGDEFTMLIENITCPEDVI 893 Query: 346 QICSALTQIFNLPFDLHNGHQTTMTLSIGYAM-TIEHASAEKLQELADHNMYQAKHQRAE 404 + + Q PF+L NG + SIG A+ + + + AD MY+AK Sbjct: 894 AVAQRIHQELQKPFNL-NGQEIFTNTSIGIALNHPHYGHPQDVLRDADTAMYRAKAAGKG 952 Query: 405 KL 406 + Sbjct: 953 RY 954 >UniRef50_C0QQF1 FOG: EAL domain protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QQF1_PERMH Length = 784 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 7/233 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + + + + + ++ +F + +++ ++ ++ ++ Sbjct: 551 FMKQIWKEVKIKGEWQGEFWGKRKNGESFPMWFTFISARGNRGQVINYILIITDITNRKI 610 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 + + A +D LTGL NR F + + + + + A++FLD D FK +ND Sbjct: 611 EEKKL----KKLAFYDGLTGLPNRLLFYNRLQHTLLRARRNREYVAVMFLDLDGFKQVND 666 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T+GH GD +L E+ KRL RL GDEF +++ ++ S V I + F Sbjct: 667 TYGHDIGDELLKEVGKRLQHTVRKIDTVARLAGDEFTVIIENLNSPENVNVIAKKILNSF 726 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 PF + NG++ + SIG A+ A+ L + AD MY AK + V Sbjct: 727 KEPFVI-NGNKINVGTSIGIAVFPLDGTDADTLIKNADMAMYLAKKSGKNRYV 778 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 8/214 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFN-----SLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 +++R N S + ++ L+ +L + A +DPL Sbjct: 716 WQGELWNKRKDGTLYPALLIIHPILNREGHISYIVFIQHDISVLKHNEEKLHQQAYYDPL 775 Query: 255 TGLANRAAFRSGINTLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 T LANR + + N+ R+ ++LFLD D FK INDT GH GD +LIE+AKR+ Sbjct: 776 TKLANRTLAYDRLQHAITNAKSRRRLVSVLFLDLDKFKNINDTLGHDIGDLLLIEVAKRI 835 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 RLGGDEF ++L D+ + + + PF L G + + SI Sbjct: 836 QALCSQSDTVCRLGGDEFLVILEDITHYETAISVAKGIIAALSQPFYL-EGRTISTSTSI 894 Query: 374 GYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 G + L + AD MY++K Sbjct: 895 GITYYPNDGDTMKTLLKNADIAMYRSKTNGRGSY 928 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 16/194 (8%) Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFL 285 L +++ + Q+ A +D LTGL NR F + + ++ + A+LFL Sbjct: 245 LTGTIQDIT-ERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLFL 303 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH------------KAYRLGGDEFAM 333 D D FK +NDT GH GDR+L ++A RL RLGGDEF + Sbjct: 304 DLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFTI 363 Query: 334 VLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELAD 392 +L D++ +V +I + + ++P+ L G + ++ SIG ++ A +A L AD Sbjct: 364 MLSDIEHFQDVAKIARRILEAVSVPYSL-EGQEVFVSTSIGISLYPFDATTASDLIRNAD 422 Query: 393 HNMYQAKHQRAEKL 406 MYQAK Q Sbjct: 423 GAMYQAKEQGRNGY 436 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 16/284 (5%) Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLT---GCILLASGIAITLTRHLHNGLVEALKNI-- 192 E I + + +L ++ +I + ++ + + + + Sbjct: 147 EQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDNITSAYEKWISELKE 206 Query: 193 -----TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR---LQAKNAQ 244 ++ +S S + + + SL+ ++ E + LQ + Sbjct: 207 NGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDITEQKKAEAVLQEQKNI 266 Query: 245 LLRTALHDPLTGLANRAAFRSGINTLMNN-SDARKTSALLFLDGDNFKYINDTWGHATGD 303 L A HD LT L NR F + + + + K AL F+D D FK+IND+ GH+ GD Sbjct: 267 LRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFIDLDKFKHINDSLGHSIGD 326 Query: 304 RVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHN 363 RVL AKR+ E RL GDEF +++ D+ + + + + P + + Sbjct: 327 RVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASVLAEKILLVLQKPMYI-D 385 Query: 364 GHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + ++ SIG ++ + A E L + AD MY+AK Sbjct: 386 EYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTF 429 >UniRef50_Q5QZ80 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=2 Tax=Idiomarina RepID=Q5QZ80_IDILO Length = 866 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 13/309 (4%) Query: 103 ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGET-IGEVRLTARDSSISHFIWFSLA 161 A K + AP+ Q + E +G + + + + Sbjct: 301 AECRRAGKGLTEYVIKMREPAFIDAPVRQKLLKKNEIELGYGGMKLAKQWLGSPLMMN-G 359 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 + G I + + L L+ + V D + + +RV++ Sbjct: 360 QVFGVIAVQTYDGDFLYHSDDLELLNFVSQHVAVAIDRKRSAEEIQRVNQF-------LE 412 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR--KT 279 +E+ R + + L A HD LTGL NR F + + + Sbjct: 413 KKVAERTEELVSEIERRKKTESSLFHAAHHDNLTGLPNRILFNERLQQAVAHKRRHPEHH 472 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 A+LF+D D FK INDT GH+ GD L+E++KR+ + RLGGDEF ++L + Sbjct: 473 FAVLFVDLDRFKNINDTLGHSAGDEFLLEVSKRIGDCVRDNDMVARLGGDEFVILLDTIT 532 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQA 398 S + + + + Q + PF L NG + SIG A +E AE+L AD MYQA Sbjct: 533 SIDDAKDVAKRMIQQMSEPFHL-NGQEHYSGASIGIAECLEETDSAERLLRDADAAMYQA 591 Query: 399 KHQRAEKLV 407 K + V Sbjct: 592 KGMGRGRYV 600 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 115/307 (37%), Gaps = 9/307 (2%) Query: 102 LASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLA 161 + S T + + + + + I + + ++ + + Sbjct: 361 VFSTDLTEQKRAEESLRLAAMVYENSSEAILVTDADNLI--IAVNPAFEQMTGYAAAEVL 418 Query: 162 VLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFA 221 I + + L +V ++ + + ++ I + Sbjct: 419 GKNPRIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAI 478 Query: 222 LDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TS 280 +L ++ + + R A +D LT L NR F + + + Sbjct: 479 YRHVALFTDIT----ERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSM 534 Query: 281 ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS 340 ALL +D D FK +NDT GH GD +LIE A+R++ RLGGDEF ++L +++ Sbjct: 535 ALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELED 594 Query: 341 ESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAK 399 + + ++ + PF L + ++ SIG ++ A+ + L + AD MY AK Sbjct: 595 MASIDRVAQDILGSLAEPFKL-DAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAK 653 Query: 400 HQRAEKL 406 + + Sbjct: 654 YAGRNRF 660 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 6/217 (2%) Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 T+V + + +R + + +D + + QL A HD Sbjct: 655 TEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLR--IDGINSDITERKQAEEQLQYNATHD 712 Query: 253 PLTGLANRAAFRSGINTLMNNSDA--RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 LT L NR F + + A+LFLD D FK IND+ GHA GD +L EIA Sbjct: 713 TLTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIA 772 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMT 370 +RL + RLGGDEF ++L ++ + +I + + PF+L G + Sbjct: 773 RRLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNL-EGQEIFTN 831 Query: 371 LSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 SIG A++ E+ +A ++ AD MY+AK Sbjct: 832 TSIGIALSNGEYEAASEILRDADTAMYRAKAGGKACY 868 >UniRef50_B8HMI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HMI3_CYAP4 Length = 792 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 143/377 (37%), Gaps = 43/377 (11%) Query: 40 TSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQ 99 +++ ++Y + + + + + L LG+ + V + Sbjct: 163 QALMKRERYLSTLVEIQQRLLALNSSEGNFY------NHVLEPLGKAAEADRVYVFEN-- 214 Query: 100 NILASWHYTRKDPGDTFSNFISHWL---FPAPIIQPIRHNGETIGEVRLTARDS----SI 152 SW+ + + + + + P +Q + + + L + + Sbjct: 215 ----SWNGQGQFCTSQKAEWCAAGIPAQIDNPDLQNMPYAEFVPRWLTLLGQGGIVAGQV 270 Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEE 212 + F +L +++ + H G + + R+ E Sbjct: 271 ADFPLQERVILEPQGIVSLLVLPLFVHHQFFGF-------------IGFDNCKQDRLWEP 317 Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 + + A SL L Q NAQL+ +L D LT L NR + + Sbjct: 318 SDIDLLQAAAAAISL-------SLERQQANAQLVTVSLRDALTSLPNRTLLFDRLEHALQ 370 Query: 273 NSDAR--KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE 330 + A+LFLD D FK IND+ GH GD+VL+E+A RL++ RLGGDE Sbjct: 371 RYQRHPQQQFAVLFLDMDRFKSINDSLGHTAGDQVLLEMAHRLSQSVREEDTVARLGGDE 430 Query: 331 FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQE 389 F ++L +V + + + I +PF+L NG ++ SIG A+ + + E+L Sbjct: 431 FVILLEEVMNLQDALHCAQRIQDILAVPFEL-NGTVVSLDASIGVALADARYHTPEELLR 489 Query: 390 LADHNMYQAKHQRAEKL 406 AD MY+AK Sbjct: 490 DADIAMYEAKAAGRGGY 506 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 8/212 (3%) Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 +S + I + AL + ++ +L+ QL A +D LTGL Sbjct: 258 RTKSGQLKWFLEQGNGIFDKQGQALGLEGFITDIS----KLKQAETQLRHDAFYDKLTGL 313 Query: 258 ANRAAFRSGINTLMNNSDAR--KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAE 315 NR+ F + + + A+LFLD D FK +ND+ GHA GD++L+EIA+RL Sbjct: 314 PNRSLFMDRLEYCIKRVKRHPDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTA 373 Query: 316 FGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGY 375 RLGGDEF ++L ++ S+ +C + Q N PF+L NG + +T+S G Sbjct: 374 CVRESDTLARLGGDEFTVLLEGIKDLSDALLVCGRIQQSLNCPFNL-NGREVLITVSTGV 432 Query: 376 AMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 A++ + E+L AD MY+AK + Sbjct: 433 ALSTMGYDDPEQLLHNADAAMYRAKALGKAQW 464 >UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47VW2_COLP3 Length = 831 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 140/416 (33%), Gaps = 41/416 (9%) Query: 24 TSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAAL 83 F ++ ++ + LK A + ++ ++ +E + Sbjct: 149 LLTFAAQHIVGAMVRLQDQQRLKNAVNARTKELMAQIREREKSELLQESLYRISELTTDI 208 Query: 84 GQQGQFSTAEVRDKQQNILASWHY-----TRKDPGDTFSNFISHWLFPA----------- 127 ++V + ++ + ++ + +FS ++ Sbjct: 209 ELDIDTFYSKVHNIIGQLINAKNFFIAKYEKDSDTLSFSYYVDEKTSNLAKDFKPRKLSN 268 Query: 128 -------PIIQPIRHNGETIGEVRLTARDSSISHFI-------WFSLAVLTGCILLASGI 173 + + + + + L I L G ++L S Sbjct: 269 RYSELVLRRRETVLLTYQEMMSLHLEGETKKPQDDIHSWLGVPLIYSGQLLGVMVLQSYY 328 Query: 174 AITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEE 233 T L+ + N R +F RR +E+ Sbjct: 329 YKTTYNQQDAELLNFVSNHVSAAIKRRELADFERRSH-------ELLEQQVKLRTLALED 381 Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK--TSALLFLDGDNFK 291 + L TA HD LTGL NR F +N + + + + A+LFLD D FK Sbjct: 382 EITHRKQAEKLLKHTAAHDSLTGLPNRMVFLDLLNHAIACAKRKDDFSFAVLFLDLDRFK 441 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 +ND+ GH GD +L IA+ L RLGGDEF +++ D++S +E ++ + Sbjct: 442 VVNDSLGHHAGDVLLKIIARELLAIVRKVDTVARLGGDEFVILIEDLKSNNEAFEVAQRI 501 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 T PF + N SIG + + + A+ + AD MY AK + Sbjct: 502 TAFLQQPFTIDN-QLVYTGTSIGISFSNIRYTDADTMLRDADTAMYHAKDNGRGRY 556 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 6/208 (2%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 +S R + + L + +L + + + +L A HD LTGL N Sbjct: 1312 KSGEIVWVRDEAVIVRDAEGQPLFWQGVLVNITD----KKKLEDKLAYQAFHDALTGLPN 1367 Query: 260 RAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 RA F + + + + A+LFLD D FK++ND+ GH GD++LIE+ RL Sbjct: 1368 RALFMDRLKGALARAKRYNSCCAVLFLDLDRFKHVNDSLGHQYGDQLLIEVGNRLLSVVR 1427 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF ++L + +Q+ + + PF L NG + ++ SIG A++ Sbjct: 1428 SADTVARRGGDEFTILLEPICELEYAKQVAERVIKELEKPF-LINGQELYISTSIGIALS 1486 Query: 379 IEHASAEKLQELADHNMYQAKHQRAEKL 406 E++ AE+L AD MY AK + + Sbjct: 1487 NEYSDAEELIHNADVAMYWAKSRGRARY 1514 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 7/233 (3%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQ 235 R + L+ + + ++ H R F +S + + + + +++ Sbjct: 386 AFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVFNDIS--- 442 Query: 236 LRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYIN 294 +L+ QL R A +DPLTGL NR + + + + A++F+D D FK IN Sbjct: 443 -QLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTIN 501 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 D+ GH GD +L+ IA+RL + RLGGDEF +V+ + +V I AL ++ Sbjct: 502 DSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEE-APVQQVASIAHALLKV 560 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + PF G + + SIG ++ SA +L AD MY AK Q + Sbjct: 561 VDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAY 613 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 9/316 (2%) Query: 95 RDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPII--QPIRHNGETIGEVRLTARDSSI 152 K + +AS + + I + + + +++ Sbjct: 632 YGKNGDPIASCGTVQDITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNL 691 Query: 153 SHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEE 212 + + + IL + R L + +++ + + + ++ Sbjct: 692 TGYALDDIRGEEPTILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVS 751 Query: 213 RIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMN 272 + + + + ++ + AQ+ A HDPLTGL+NR + ++ ++ + Sbjct: 752 VVRDADGVLTHYVASFTDIT----ERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLA 807 Query: 273 NSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEF 331 + + A++FLD D FK IND+ GHA GD++L+E+A+RL + RLGGDEF Sbjct: 808 LARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEF 867 Query: 332 AMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQEL 390 +VL +V + ++ L + + GH T SIG ++ A+ L + Sbjct: 868 VVVLTEVGDAAGAARVADKLLGALVPRYRIG-GHALHTTASIGISLYPHDGDDADALMKN 926 Query: 391 ADHNMYQAKHQRAEKL 406 AD MY AK Q + + Sbjct: 927 ADTAMYHAKSQGRDNV 942 Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%) Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 RH + + + + L ++ L ++ +T Sbjct: 287 RHLPALDWGMVVKIDADEALAPAHHLRQLTYVALALFLLLSAATAFLLGRRFARPIRAMT 346 Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ 244 V + + + +RV ++ E R A FN + D + L+A+ + Sbjct: 347 RVADQIAAG-DLRQRVPQDGGDELGRLAAAFNRMADTLAASYDNLEAEVEK 396 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 7/216 (3%) Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 ++ + + F +S + ++ +++++ + QL + HD Sbjct: 478 AELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDIT----ERKRYEEQLEYQSNHD 533 Query: 253 PLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 LTGL NR I + ++ ++ +A+ F+D D+FK+IND+ GH GD++L A+ Sbjct: 534 GLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAAR 593 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 RL+E R GGDEF +VL D+ + ++ + P+ + H+ ++ Sbjct: 594 RLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGE-HELVVSC 652 Query: 372 SIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 S G ++ + A+ L + AD MY+AK Sbjct: 653 STGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNF 688 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 117/276 (42%), Gaps = 7/276 (2%) Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 I V + ++++ + + +L + R + + + Sbjct: 204 IMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLLASGRHDRDFYREMWSAIERNGSWS 263 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 ++ + ++ ++ ++ + + ++ E+ + +A +++ A +D Sbjct: 264 GEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQ----RAAASRIQFLAHYD 319 Query: 253 PLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 PLT L NRA + ++ + ++ +A+LFLD D FK IND+ GH GD +L E+A+ Sbjct: 320 PLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQ 379 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 RL R GGDEF ++L V S + + + + + NG+ ++ Sbjct: 380 RLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPV-NGYVLNVSF 438 Query: 372 SIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 SIG ++ + A + L AD MY++K + Sbjct: 439 SIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQF 474 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 15/240 (6%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + + A+K + + + + E ++ + + +L+ Sbjct: 201 VKQTISNAVKAKENFSLNYQVMNLNGTQKHILNQGEVFVDDNGVPEIMLGVVQDLSQLKQ 260 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGH 299 ++ A +D LTGLANR F ++T + + + AL FLD D FK INDT GH Sbjct: 261 AEERIRFLAFYDGLTGLANRMLFMDRLDTQIKKATRYNQKFALFFLDLDQFKKINDTLGH 320 Query: 300 ATGDRVLIEIAKRLAEFGGLRHK------------AYRLGGDEFAMVLYDVQSESEVQQI 347 GD +L +A+ L RLGGDEF ++L D++S I Sbjct: 321 HIGDLLLKTVAETLKSCIRKTDTAARRDKDESGSMIARLGGDEFTVLLSDIKSPENSAII 380 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + + G + ++T SIG ++ + E L + AD MY AK + Sbjct: 381 AQRILDAIPEAYSI-EGKEVSVTTSIGISVFPADGSTPETLLKNADSAMYHAKDRGKNNY 439 >UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 8/212 (3%) Query: 199 VRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLA 258 + R ++S + R + ++++ E + + + A HDPLT L Sbjct: 528 HKDKRIVWVQLSVSISRDQDRTPKYLIAQIEDITERKYQHEEAEQ----FAYHDPLTNLP 583 Query: 259 NRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFG 317 NR S ++ + ++ + AL+FLD D+FK IND+ GH GD +L E+A RL + Sbjct: 584 NRRMLLSRLHHALMQTERFYRAMALMFLDLDHFKNINDSLGHDVGDMLLKEVANRLLKCV 643 Query: 318 GLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAM 377 R GGDEF +VL ++ + + + + F P L NGH+ M+ SIG A+ Sbjct: 644 RSIDTVSRHGGDEFVIVLSEISHTEDAELVAQKIIASFKEPI-LINGHEIMMSTSIGIAV 702 Query: 378 TIEH--ASAEKLQELADHNMYQAKHQRAEKLV 407 + A++L + AD MY+AK + Sbjct: 703 SKHEKPTKADELMKHADKAMYEAKGAGRNRYC 734 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 11/237 (4%) Query: 178 TRHLHNGLVEALKNIT----DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEE 233 R L + ++ + +V ++ + ++ I + + + + L +++ Sbjct: 317 ARQLWKSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDISI 376 Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKY 292 + QLLR A +D LTGL NR + + + + ++FLD DNFK+ Sbjct: 377 ----RKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKH 432 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 INDT GH GD +LIE A+R++ RLGGDEF +VL + Q+ + Sbjct: 433 INDTLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERIL 492 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAEKLVR 408 + F PF L G + +T SIG A + + L + AD MY+AKH+ R Sbjct: 493 KTFAPPFMLS-GQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYAR 548 Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 75/260 (28%), Gaps = 29/260 (11%) Query: 3 DNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQY------AQKNLALT 56 D + + F+ A +I + L + + Y ++ + + Sbjct: 13 DMPDIATRLKRFRAASPLSFRLVAWILLFSSAFTLLASGIQIYSDYREDLSKIEQRMQVI 72 Query: 57 AATMTYSLEAAVVFADGPAATETLAALGQQGQF--STAEVRDKQQNILASWHYTRKDPGD 114 + SL ++ D + + + + ++ Sbjct: 73 ESGYRSSLAQSLWALDQKHLQTQMDGILSLPDIEHLRLRIEPDSELVMGELPRDTDTLTH 132 Query: 115 TFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGC-ILLASGI 173 +F +GE+ +TA + + + + L+ + Sbjct: 133 SFELIYRD------------DAEFRLGELTITASLHRVYDELRRRVGFILATQFLIIFVV 180 Query: 174 AITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEER-------IAEFHRFALDFNS 226 +I + + + L ++ D D+ S RN SR + +R E N Sbjct: 181 SILILWIFRHLVTRHLADMADYTRDL-SLRNLSRPLELDRPDTPAYQRDELGMVTEAINQ 239 Query: 227 LLDEMEEWQLRLQAKNAQLL 246 + + + + R + A++ Sbjct: 240 MRERLIDDVTRRERDEAEIR 259 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 + + A + A HD LT L NRA F+ + + ++ ++ A++FLD D Sbjct: 274 IARDVTERKEAEAFINFQAYHDLLTRLPNRALFKDRLELAITHARRSQQKLAVMFLDLDR 333 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GHA GDR+L + RL + R GGDEF ++L + + + I Sbjct: 334 FKVVNDTLGHAMGDRLLQAVTHRLEKCLRRGDTLSRFGGDEFTLLLPSIHGHDDARNIAR 393 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L PF L + H+ + +SIG ++ E + + L + AD MY K + + Sbjct: 394 KLIHALKAPFQLGD-HEVFVGVSIGISVFPEAGETMDLLIQNADIAMYHVKARGKDGY 450 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 4/183 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLF 284 ++ + L+ Q K + A HD LT L NR F +N + ++ + A++F Sbjct: 428 AMSASIS-AALQRQDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMF 486 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D D FK INDT GH+ GD +L E+A RL + R GGDEF ++L ++S ++ Sbjct: 487 MDLDRFKLINDTLGHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDA 546 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRA 403 + F + H+ +T SIG A+ E AE L + AD +Y++K Q Sbjct: 547 INTAYRILDALKAAFVIRR-HELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGR 605 Query: 404 EKL 406 Sbjct: 606 GTC 608 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 9/297 (3%) Query: 112 PGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLAS 171 ++ +S + +P+ I I + + + ++ + + IL + Sbjct: 681 QSESQLKKLSRAIEQSPVSVVITDPEGRIEY--VNPKFTQLTGYTLEEVIAQNPRILKSG 738 Query: 172 GIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEM 231 + ++ L + + ++ + + F S + + ++F + +++ Sbjct: 739 NLLPSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDI 798 Query: 232 EEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNF 290 + + +L A HD LTGLANR + ++ S K A++ LD D F Sbjct: 799 T----QRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRF 854 Query: 291 KYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSA 350 K IND+ GH GD+VL + +RL ++ RLGGDEF ++L DV+ + +I Sbjct: 855 KVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHN 914 Query: 351 LTQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAEKL 406 L + N PF LH G + ++ S G ++ ++ L AD MY+AK + Sbjct: 915 LLRKLNEPFFLH-GRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCGLY 970 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 97/212 (45%), Gaps = 6/212 (2%) Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 + + + I F + + + L K Q+ A HD LTGL Sbjct: 434 RTKEKEGYYYYLHITLIPTF--INKEVVGMFGIARDITT-LYEKQKQVEHLAFHDALTGL 490 Query: 258 ANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF 316 NR F + ++N + A A++FLD D FK IND GH GD +LIE+AKRL Sbjct: 491 PNRRKFEKDLKNILNTAQASANDVAVMFLDLDRFKKINDRLGHGIGDLLLIEVAKRLRGC 550 Query: 317 GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA 376 + R GGDEF ++L D+ SE I + I N PF + + + ++T SIG A Sbjct: 551 LRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNILNKPFFIKD-EELSITPSIGIA 609 Query: 377 MTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 M + +L + AD MY+AK + V Sbjct: 610 MYPDCGTDVTELMKNADMAMYRAKANGKNRFV 641 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 4/183 (2%) Query: 226 SLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLF 284 + + + + ++L A HDPLT L R F + M ++ K A+ F Sbjct: 311 RMAGSHTDIT-QRKQMESKLEYMAFHDPLTNLPRRDVFLERLKVAMADARRNGKKLAVFF 369 Query: 285 LDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV 344 +D DNFK IND+ GH TGDR+L +IAK L + R+GGDEF ++L DV S + Sbjct: 370 VDLDNFKIINDSLGHHTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILLPDVNSIEDT 429 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRA 403 ++ + ++F+ P L+N ++ +T+SIG A+ +H +E + + AD MY AK + Sbjct: 430 DKVAKRILELFDQPIKLNN-YELPVTISIGIAIYPDHGKSERAILKNADIAMYTAKRKGK 488 Query: 404 EKL 406 Sbjct: 489 NGF 491 >UniRef50_C7R8B2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8B2_KANKD Length = 427 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 9/212 (4%) Query: 197 HDVRSNRNFSRRV--SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 + VR N+ + I + + ++ + Q+ A +D L Sbjct: 215 YRVRHKNNYWCWHTTNASPILDKDGKVTSTVGIARDIT----ERKFIEQQVEHQAHYDTL 270 Query: 255 TGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 T L NR+ F + + + + ALLFLD D FK +ND +GHA GD +L ++A+R+ Sbjct: 271 TDLPNRSLFSDRLEQAIRLAHRQHEQLALLFLDLDKFKPVNDNYGHAIGDILLQQVAQRM 330 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 + R+GGDEF ++L V+S I L Q + PF + N ++ SI Sbjct: 331 KDCLRESDTVGRIGGDEFLVLLPHVESVDSATHIAEKLLQAISSPFRI-NRIDIEISCSI 389 Query: 374 GYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 G A+ H + +L ++AD MY+AK+Q+ Sbjct: 390 GIALYPTHGNTVLELIQVADQAMYKAKNQKGN 421 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 8/226 (3%) Query: 186 VEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME---EWQLRLQAKN 242 + K + + +++R F + + + L E+ + Q +LQ + Sbjct: 397 AKPEKTVHHFIDQNQTSRYFE--FTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQLQQQK 454 Query: 243 AQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHAT 301 L A HDPLT L NR F + ++ + ALLF+D D FK IND++GHA+ Sbjct: 455 NDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHAS 514 Query: 302 GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL 361 GD VLIE KRL + RLGGDEF +++ ++++ + + + + + + P + Sbjct: 515 GDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFV 574 Query: 362 HNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 N + +T SIG ++ A +L + AD MYQAK Sbjct: 575 -NENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTY 619 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 8/231 (3%) Query: 179 RHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRL 238 R L G+ + + ++ + + + + ++ +L ++ Sbjct: 739 RQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISAQ---- 794 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDTW 297 +++ ++ A HD LT L NR + + + A++F+D D+FK IND+ Sbjct: 795 KSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSL 854 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS-ALTQIFN 356 GH GD VL+ A RL+ RLGGDEF ++L D++ ++++I L + Sbjct: 855 GHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMR 914 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 P+D G++ + SIG ++ E + L AD MY+AK Sbjct: 915 QPYD-AGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNY 964 Score = 41.3 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 ++ +V ++ + V V+ ++S R +E E FNS+L+ + ++ Sbjct: 366 VFYIARRIVAPIRELATVAGAVQMTNDYSLRAKKEGNDEIGELVSCFNSMLERLNNDRIT 425 Query: 238 LQA 240 Q Sbjct: 426 QQE 428 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 6/219 (2%) Query: 192 ITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALH 251 + ++ ++ + E I R A + + E + +QLL A + Sbjct: 176 LCNISERKKTEEMLHQAYDELEIRVAERTAELVKANQKLLTEIT-ERKRAESQLLHLAFY 234 Query: 252 DPLTGLANRAAFRSGINTLMNNSDARKT--SALLFLDGDNFKYINDTWGHATGDRVLIEI 309 D LTGLANRAAF + ++ +N S A+LF+D D FK IND+ GH GD++L+ Sbjct: 235 DILTGLANRAAFMNRLSHAINYSKRHSNYLFAVLFIDLDRFKVINDSLGHLNGDQLLLAT 294 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTM 369 A RL A RLGGDEF ++L +Q S+V + + Q LPF+L G + + Sbjct: 295 ASRLQVCVRSIDTAARLGGDEFTILLEGIQDVSDVITVAERIQQELALPFEL-EGQEVFI 353 Query: 370 TLSIGYAMTI--EHASAEKLQELADHNMYQAKHQRAEKL 406 T SIG A++ ++ E++ AD MYQAK Q + Sbjct: 354 TASIGIALSSTLDYKHPEEVLRDADTAMYQAKVQGRARY 392 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 + +S R L F L ++ +A ++L A +D LTGL N Sbjct: 631 GREDKWWFELSVSRKHVDSAAGLRFIVLARDIT----ERKASEQRILHLAHYDSLTGLPN 686 Query: 260 RAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 RA + +N + + K A+LF+D D FK IND+ GH GD +L +A+R+ Sbjct: 687 RALLADRMRVAINRAARQAKRLAVLFVDLDRFKAINDSLGHDVGDHLLKVVAERMQTSIR 746 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R+GGDEF ++L ++++ + ++ + + P+ + H+ +T SIG + Sbjct: 747 SVDTVSRVGGDEFVVLLNEIETAEDAARVAQKIIDGLSQPYQI-EKHELLLTGSIGICIY 805 Query: 379 IEHA-SAEKLQELADHNMYQAKHQRAEKL 406 ++ L AD +MY AK + Sbjct: 806 PDNGKEPNILLRNADASMYTAKEAGHNRY 834 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 6/228 (2%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + G+ EA ++ + ++ F ++ + + + + + ++ R++ Sbjct: 327 MWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDIS----RMKE 382 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGH 299 A+L R A +D LT L NR + + + A+LFLD D FK +ND+ GH Sbjct: 383 TEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGH 442 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD +LIEIA+RL RLGGDEF ++L ++S ++V + + N F Sbjct: 443 PVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSF 502 Query: 360 DLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 L +G + + SIG ++ + A +L AD +YQAK Sbjct: 503 QLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVY 550 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 7/266 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + A + ++ + T +L + + + + ++ + +S Sbjct: 999 LEVNATFTELTGYSRAEALGNTPDMLKSGHHDPAFYEEMWQKIRDDGYWRGEIWNRKKSG 1058 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 F +++ + +F ++ ++ L+ +L A D LT L NR Sbjct: 1059 EIFVEQLTISSVRNRDGALSNFVAIFSDIT----LLKQHQQRLEHLAHFDALTQLPNRML 1114 Query: 263 FRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 + ++ KT A+ +LD DNFK IND +GH+ GD +LIE+A+RL Sbjct: 1115 LSDRMQLAKAQAERSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTCVRAGD 1174 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 RLGGDEF +++ ++ +E + + + PF + T++ SIG + Sbjct: 1175 TVARLGGDEFVLLITNLDDLNECDHAMTRVISALSQPFRVS-AQFVTVSASIGVTLYPHD 1233 Query: 382 A-SAEKLQELADHNMYQAKHQRAEKL 406 ++ L AD +MY AK + + Sbjct: 1234 GSDSDTLLRHADQSMYAAKQEGRNRY 1259 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 130/336 (38%), Gaps = 12/336 (3%) Query: 73 GPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQP 132 A L L +G T E ++ I + K+ N I + + Sbjct: 227 RLNAAAMLDGLHLRGHVQTVEDI-SERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGD 285 Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNI 192 + + + R+++I + +L G + L + + A Sbjct: 286 VTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLA---- 341 Query: 193 TDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHD 252 D + R + S I + ++ E +A ++ A HD Sbjct: 342 ADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSES----RAMALKMAHLAQHD 397 Query: 253 PLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAK 311 LTGL NRA ++ + + K +LFLD D FK+IND+ GHA GD++L ++A+ Sbjct: 398 FLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAE 457 Query: 312 RLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL 371 RL R GGDEF ++L +++ + I L F P + G++ ++L Sbjct: 458 RLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIA-GNELHVSL 516 Query: 372 SIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 SIG ++ + A+ + + AD MY AK Sbjct: 517 SIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNY 552 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 4/192 (2%) Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA- 276 S + + + +++ +L A HD LT L NR + + + + Sbjct: 453 REANKGVTSAVVNIHDIT-QIKESEQKLYYQAHHDTLTNLPNRMLMNTRLEQSIQQATRK 511 Query: 277 RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 A++F+D D FK IND+ GH GD +L ++A+RL + R+ GDEF ++L Sbjct: 512 GDKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARISGDEFVVILE 571 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNM 395 D++ + L + F PF + G MT S+G ++ + L AD M Sbjct: 572 DIKDTQHAGMVVGKLMRTFEEPF-IIEGRTIKMTSSMGLSLFPDDGTDVATLLRNADAAM 630 Query: 396 YQAKHQRAEKLV 407 Y+AK Sbjct: 631 YRAKEDGRNTYC 642 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 30/339 (8%) Query: 88 QFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTA 147 Q S D L + + + L A + I +IG+ ++ Sbjct: 405 QISAIWETDAHGQPLRTLAVLKD-----VTEQKRLALELAAEKERIEVTLHSIGDGVIST 459 Query: 148 RDSSISHFIWFSLAVLTGCILLASGIAIT--LTRHLHNGLVEALKNITD----------- 194 ++ ++ + GC+L + + + L + + Sbjct: 460 DEAGRITYLNPVAEQMVGCLLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGV 519 Query: 195 ---VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALH 251 RS R++ ++S IA L + ++ E + Q ++ A H Sbjct: 520 RESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQ----KMSYLAHH 575 Query: 252 DPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIA 310 D LTGL NR F+ ++ + + A++F+D D+FK++ND+ GHA GD +L +A Sbjct: 576 DGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVA 635 Query: 311 KRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES--EVQQICSALTQIFNLPFDLHNGHQTT 368 +RL RLGGDEF ++L D+ V ++ + + P L G + Sbjct: 636 QRLTGALRASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLG-GTEVN 694 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + S+G A+ + L + AD MY++K + + Sbjct: 695 VGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRY 733 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 7/228 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + L +V+ + S R+S + + ++ ++ E +A Sbjct: 751 MAQALALTGHWSGEVMGQRKQGALASERLSLSLVRRPDGSTQNTIAVFTDLTEQ----KA 806 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGH 299 + + R A DPLT L NR F+ ++ + +D AL FLD D FK INDT GH Sbjct: 807 QEELIWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALFFLDLDRFKPINDTMGH 866 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 GD +L + A+R+ RLGGDEF ++L ++Q+ ++ +I + + PF Sbjct: 867 QAGDELLQKCAERINAAVRSSDTVARLGGDEFTVILPNIQNGQDLSRIAEGIIKTLTEPF 926 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L G + ++ S+G A+ + + E L AD +YQAK + Sbjct: 927 YLKAG-EANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGRNNV 973 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 5/200 (2%) Query: 209 VSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN 268 + + EF L +E L ++ A +D LTGL NR F +N Sbjct: 481 IHVRIVPEFGEQGQVIGVLA--VERDITELMEYRERIHYLAYYDALTGLPNRTLFADRVN 538 Query: 269 TLMNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLG 327 ++ ++ + L+ LD D FK +NDT GH GD +L+ +A+RL RL Sbjct: 539 QVLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLS 598 Query: 328 GDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EK 386 GDEFA++L ++++ ++ I + PF +H+ + ++ SIG A+ + Sbjct: 599 GDEFAILLPELRNPDDLATIARKINDEIAKPFLIHD-KELFISTSIGIAIYPDDGDDRAT 657 Query: 387 LQELADHNMYQAKHQRAEKL 406 L + AD MY AK+ Sbjct: 658 LFKSADVAMYHAKNYGRNNY 677 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 10/233 (4%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 R + + +V + + + +S I + ++ Sbjct: 904 YRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDIS----E 959 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA---RKTSALLFLDGDNFKYIN 294 +A ++ A D LT L NR+ + ++ + ++ ++ A++FLD D FK IN Sbjct: 960 RKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNIN 1019 Query: 295 DTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQI 354 DT GH GD +L+E+A RL RLGGDEF +VL +++ + + Sbjct: 1020 DTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTG-ADALAAERVAGKILKA 1078 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + + + GH T SIG A+ S E L + AD MY AK + Sbjct: 1079 LSRAYQI-EGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNV 1130 >UniRef50_UPI0001698C53 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C53 Length = 457 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 7/228 (3%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 + + + + + ++ + R F ++ + + ++ + ++ Sbjct: 194 FYEAMWSTIRQRGRWQGEIRNRNRDGDIFPAWLTISSVKDDQGEVTNYVGIFSDISP--- 250 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYIND 295 L+ Q+ A HDPLTGL NR F + + + A+LFLD D FK IND Sbjct: 251 -LKHSLEQIEHLANHDPLTGLPNRLLFLDRLKVAVRQARRGGHALAVLFLDIDRFKDIND 309 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GHA GD++L+E+A R+ RLGGDEF +++ DV+S SE + + + Q Sbjct: 310 SLGHAMGDQLLLEMAARVRGQVREEDTVARLGGDEFVILIGDVESASEAELVARKVMQGL 369 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQR 402 +P L + + +S+G ++ SA++L AD MY AK + Sbjct: 370 EVPIRL-ETSEIILRVSMGISLYPNDGESADELIRHADIAMYHAKERG 416 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 116/320 (36%), Gaps = 13/320 (4%) Query: 94 VRDKQQNILASWHYTRKDPGDTFSN----FISHWLFPAPIIQPIRHNGETIGEVRLTARD 149 + Q +L + F +S +F + I V + + Sbjct: 465 FTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQS-SEGIMLLDPNCHIVMVNSAF 523 Query: 150 SSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV 209 + I+ + +L + + + + +V + + + + Sbjct: 524 THITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWL 583 Query: 210 SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINT 269 + + + + ++ + ++ A DPLTGL NR N Sbjct: 584 LIQTMRDSRGTLTHYIGTFTDLT----ERKETEERVQWLAHFDPLTGLPNRTLLHIRSNL 639 Query: 270 LMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGG 328 ++ + + AL+FLD DNFK +ND+ GH GD +L + ++RL + RLGG Sbjct: 640 AISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGG 699 Query: 329 DEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKL 387 DEF +VL + L I +++ H+ +T+SIG AM + + L Sbjct: 700 DEFVLVLPG-TDTDGAAYLAERLLNIAARQYNI-ERHEINLTVSIGIAMYPTDGTDFDTL 757 Query: 388 QELADHNMYQAKHQRAEKLV 407 AD MY+AK Sbjct: 758 WRSADAAMYRAKQSGRNDYC 777 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 3/180 (1%) Query: 230 EMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGD 288 ++E+ L + QL A HD LT L NR F + +N + ALLF+D D Sbjct: 147 DLEKNLKILDEQREQLEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLD 206 Query: 289 NFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQIC 348 +FK IND+ GH GD+VLIE+++R+ RLGGDEF ++L D+ ++ I Sbjct: 207 HFKEINDSLGHGVGDKVLIEVSRRMKNQMRKSDTLSRLGGDEFCIILNDIIDIEDMSDII 266 Query: 349 SALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 ++ + P ++ NGH + +SIG ++ SA L + AD MY+AK Sbjct: 267 TSGMEALKEPMEI-NGHTLYVGMSIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRNTYC 325 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 69/363 (19%), Positives = 137/363 (37%), Gaps = 16/363 (4%) Query: 48 YAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHY 107 Y L + + +AA + A E+ L TA ++ + + Sbjct: 193 YNINAHKLLERELADAKQAAELAN--HALLESHDKLEATVAQRTAALKTSNEQL--KQQM 248 Query: 108 TRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCI 167 ++ + I + E + I+ + + Sbjct: 249 IEREQAQHRLRLTAGVFENTSEAIIITDAANRVME--VNPAFVRITGYPADEVIGRDPGF 306 Query: 168 LLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERI-AEFHRFALDFNS 226 + + + + + + ++ + + + ++ + E Sbjct: 307 MKSHRHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIYPKWLTINAVYDERGHLVNCIG- 365 Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNS-DARKTSALLFL 285 + RL+A +L + A D LT L NRA F+S ++ + + + L+F+ Sbjct: 366 ----IFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKVGLIFI 421 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV- 344 D D+FK+IND+ GH GD++LIE AKR+ R+GGDEF ++L D+ ++V Sbjct: 422 DLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTDTAKVM 481 Query: 345 QQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH-ASAEKLQELADHNMYQAKHQRA 403 + + + F P L + + + S+G A+ + +A L + AD MY+AK Sbjct: 482 TNVALTILESFTHPIVLED-KKLFIGCSLGMAIYPDDSGNAALLIKHADTAMYRAKESGR 540 Query: 404 EKL 406 + Sbjct: 541 NRY 543 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + L + + + + + +S ++ + ++ ++ L+ Sbjct: 526 IDATLSKTGRWQGESIRRKANGEPLPIWLSISALSSTKTEQSSYVAVFSDIS----ELKE 581 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGH 299 +L + A +D LT L NR F I + + + K +ALLF+D D FK +ND GH Sbjct: 582 AEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDRFKQVNDNHGH 641 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 TGD++L+E A+R++ L RLGGDEF ++L ++ VQ I + + PF Sbjct: 642 HTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIARRIQKSLRDPF 701 Query: 360 DLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 L + + + SIG AM + +AE L + AD MY K + Sbjct: 702 RLDD-KEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKERGRN 746 >UniRef50_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT Length = 462 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 17/271 (6%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 + + ++++ + +A IL + + + + L + S Sbjct: 198 ITVNPAFTAMTGYSLSEVAGKNPNILCSGKQSPAFYQRMWQSLADMGH---------WSG 248 Query: 203 RNFSRRVSEERIAEFHRFALDFNS-----LLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 +++R + E AE+ + FN + + + + + R A +D LT L Sbjct: 249 ELWNKRKNGELFAEWLSINVLFNEDGSKRMYVAIFSDVTEKKQADEIIWRQANYDMLTQL 308 Query: 258 ANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF 316 NR F + + + ALLF+D D FK +ND+ GH GD +L+++A+RL Sbjct: 309 PNRRLFCDRLEHEIRGAHRAGCLLALLFIDLDLFKEVNDSLGHEAGDALLVKVAERLTAS 368 Query: 317 GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYA 376 R+GGDEF +L + S +V+++ + + + + PF++ NG ++ S+G A Sbjct: 369 VRESDTVARMGGDEFTAILPQIDSLEDVERVAALIVKALSEPFEV-NGAIVNISASVGVA 427 Query: 377 MTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + A + +L AD MY AK Q Sbjct: 428 IYPRDAKNTTELLSQADSAMYVAKEQGRGCY 458 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 3/175 (1%) Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKY 292 +A ++ R A D LTGL NR + + L+ + + A+LF+D D FK Sbjct: 178 DITERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKE 237 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 +NDT GH TGD++L +++RL RLGGDEF ++L + V I + L Sbjct: 238 VNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLL 297 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 Q P L + + + SIG ++ L + AD MY AK Q Sbjct: 298 QSLCKPVQL-DAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNTY 351 >UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E241_GEOLS Length = 557 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 5/215 (2%) Query: 195 VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 V ++ + + R I+ L F L ++ L+ + A + A D L Sbjct: 331 VSPEIVRTKLYGFRKILLLISSVLIVLLAF--LARQVALNALQREETAALVHAMAFRDAL 388 Query: 255 TGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 TGL NR +N + ++D A+LFLD D+FK +NDT GH GD++L +++ RL Sbjct: 389 TGLPNRRLLEDRLNQSIASADRNAGKVAVLFLDLDHFKAVNDTLGHEVGDQLLKQVSGRL 448 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 E RLGGDEF ++L ++ S +V + + Q + PF + G Q + SI Sbjct: 449 QEAVRKSDTVARLGGDEFILLLLNITSHQDVDSVADKVIQAISRPFSIA-GQQAQVGTSI 507 Query: 374 GYAMTIEH-ASAEKLQELADHNMYQAKHQRAEKLV 407 G A+ E E L AD +Y+AK + V Sbjct: 508 GIALYPEDCTDPESLVAFADKALYKAKQSGRNRYV 542 >UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VEL8_DESVV Length = 926 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%) Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGL 257 V + + R++ A D +L ++E+ + Q A+L R A HD LTGL Sbjct: 447 RVDGEQRWGRQIVTAVRD----VAGDVAFVLAQVEDITEQ-QQTEARLTRMAFHDALTGL 501 Query: 258 ANRAAFRSGINTLMNNSDARK--TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAE 315 NR F + T + + + A+LFLD D FK +ND+ GH GD +L + A+RL Sbjct: 502 PNRVLFLDRVETALRRARRHETYHFAVLFLDLDRFKVVNDSLGHKAGDELLRQFARRLEP 561 Query: 316 FGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGY 375 R GGDEFA++L D+ E I L PF L G + SIG Sbjct: 562 CLREVDTMARFGGDEFAILLDDMSDVDESVNIIERLQAALRQPF-LVQGMEVYTGASIGA 620 Query: 376 AM-TIEHASAEKLQELADHNMYQAKHQRAEKLV 407 + ++ AE + AD MY+AK + V Sbjct: 621 VLRARDYTQAEDILRDADIAMYRAKDSGKGRFV 653 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 22/267 (8%) Query: 151 SISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVS 210 S + + + ++T + + + H ++ L + + +N + V Sbjct: 287 QYSRDMSWLVTIITLSTVAFAIPLLIFLSHFQ--IIRPLNKLHHAFLRLGNNVELIQ-VK 343 Query: 211 EERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTL 270 E + +FN + L+L N ++ A +DPLTGL NR F +N Sbjct: 344 TSGDDELNELGKEFNRM-------SLKLFKSNEKIRELAFNDPLTGLPNRFMFTKHLNLS 396 Query: 271 MNNSD-ARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG---------LR 320 + ++ R A++F+D DNFK+IND+ GH +GD++L EI RL Sbjct: 397 LESAKCDRGQLAVMFIDLDNFKHINDSLGHQSGDQLLHEIGDRLHRNLRSKDFCEHFSDS 456 Query: 321 HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE 380 RLGGDEF + L ++ S + +++ + +I + P L +G ++ SIG A + Sbjct: 457 DMVARLGGDEFTVFLGELPSINIAEKVAKRILEIISQPI-LLSGKSYYISASIGIACYPQ 515 Query: 381 HA-SAEKLQELADHNMYQAKHQRAEKL 406 + + ++L + AD MY AK + Sbjct: 516 NGVTTQELIKNADIAMYHAKKKGKGGY 542 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 127/326 (38%), Gaps = 13/326 (3%) Query: 87 GQFSTAEVRDKQQNILASWHYTRKDPGDTF-SNFISHWLFPAPIIQPIRHNGETIGEVRL 145 + S D ++L R G + + I +++ Sbjct: 541 EEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLRVAAAAFETHEAIMITDAHGTIIKV 600 Query: 146 TARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNF 205 I+ + + IL A + + L + ++ +S + + Sbjct: 601 NQAFQRITGYSQEEVLGENPRILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIY 660 Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 + ++ + + + ++ ++ ++ + + ++ A +D LT L NR Sbjct: 661 PKWMTITAVRDENGKTTEYVAIFSDIT----QRKLAEEEIRNLAFYDALTRLPNRRLLLD 716 Query: 266 GINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 ++ ++ S + A+LFLD D FK +NDT GH GD +LIE+A+R+ Sbjct: 717 RLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVA 776 Query: 325 RLGGDEFAMVLYDVQSESE-----VQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI 379 RLGGDEF +++ ++ + +E + I + ++P+ L H + SIG + Sbjct: 777 RLGGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHH-HSSPSIGVCLYR 835 Query: 380 E-HASAEKLQELADHNMYQAKHQRAE 404 S + L + AD MYQAK Sbjct: 836 GIEESTDDLLKHADMAMYQAKDSGRN 861 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 128/363 (35%), Gaps = 29/363 (7%) Query: 54 ALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPG 113 A + + A+ G + L L + D+ LA Sbjct: 303 RRIARPVQALVAPALAIGRGEPVS--LPPLALEEA-------DEVGRALAQAQELLHQRE 353 Query: 114 DTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGI 173 + A + G V + + + S+ ++ + Sbjct: 354 ADRAQAEEKLALAA-----TALDSAVEGVVIARGGRIATVNRAFTSITGYRSAEVIGQPL 408 Query: 174 AITLTRH-------LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNS 226 AI L + E + +V ++ + S R A Sbjct: 409 AILLAEAEKTHRNDRRRAMCETGQWQGEVHGRRKNGEMYPAWSSISRAA-----YGSDEM 463 Query: 227 LLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFL 285 +L + + A+L A +D LT L NR FR + ++ ++ ALLF+ Sbjct: 464 ILVCVFSDISAAKQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERHGNMLALLFI 523 Query: 286 DGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQ 345 D D FK INDT GHA GD +L +A+RL RLGGDEFA++L +++S E Sbjct: 524 DLDGFKPINDTLGHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDELRSPEEAG 583 Query: 346 QICSALTQIFNLPFDLHNGHQT-TMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRA 403 I + P+ L Q ++ SIG + AE L AD MY+AK + Sbjct: 584 IIARNILDTLERPYILAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAMYRAKQEGK 643 Query: 404 EKL 406 + Sbjct: 644 NRY 646 >UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5Y8_9GAMM Length = 1085 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 134/313 (42%), Gaps = 11/313 (3%) Query: 97 KQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVR-LTARDSSISHF 155 + +L + T + + F S A I +T G + + I+ F Sbjct: 370 DSELLLVVYDITVRKEAEEQLRFSSRVFNQAQEGIIIT---DTSGTITDVNPAFCEITGF 426 Query: 156 IWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIA 215 + IL + + + ++E +V + ++ ++ ++ I Sbjct: 427 SREEVLGKGPDILNSGKHSPEFFSKMWQSIIEHGYWQGEVWNRRKNGELYAELLTISAIT 486 Query: 216 EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSD 275 + + F L ++ + + + L A +D LT L NR F + M +S+ Sbjct: 487 DDDGQSRHFVGLFSDITQT----KQQQETLEMMAHYDVLTKLPNRVLFADRFSQAMAHSN 542 Query: 276 ARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV 334 +T A+ FLD DNFK +NDT+GH GD++LIE+A RL + R GGDEFA++ Sbjct: 543 RTETMLAICFLDLDNFKPVNDTYGHEVGDQLLIEVAVRLRKNVRDEDTISRFGGDEFAIL 602 Query: 335 LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADH 393 D++S+SE + + + + P+++++ ++ S G E+A + L AD Sbjct: 603 FRDIESQSECEFMLRRIHESLAQPYNVNDTR-IDISASSGVTFYPQENADLDTLLRHADQ 661 Query: 394 NMYQAKHQRAEKL 406 MYQAK Sbjct: 662 TMYQAKLAGRNTY 674 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 3/181 (1%) Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLD 286 + E + + L+ + ++L A HD LT L NR+ F I + + AL+ LD Sbjct: 307 ISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLD 366 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQ 346 D FK +ND+ GH GD +L IA RL E RLGGDEF +VL + +V Sbjct: 367 IDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIF 426 Query: 347 ICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + + L + P D+ GH + T+SIG ++ E ++L + AD MY+AK Sbjct: 427 VANKLLATLSRPLDIS-GHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNN 485 Query: 406 L 406 Sbjct: 486 C 486 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 3/172 (1%) Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 + +++ A HD LTGL NR R I ++ + ++ A+LF+D D+FK IND Sbjct: 440 EGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIND 499 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 + GH GD +L +A RL R GGDEF +VL + + ++ + F Sbjct: 500 SLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSF 559 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 LPF +H ++ + SIG A+ + +AE L + +D MY AK Sbjct: 560 ALPFHIHK-NELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNY 610 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 7/266 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 V + ++I+ F + +L + + L ++ + ++ Sbjct: 423 VAVNPAFTTITGFTSEEVIGKNPRVLKSDMHGEEFYGEMWTTLKARGSWHGEIWNRRKNG 482 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 ++ +S I + ++ ++ ++ + ++ K QL HD LTGL NR Sbjct: 483 ESYPEILSISSIRDDDGEIANYVAVFHDISD----MKHKEEQLAHHLYHDGLTGLPNRVL 538 Query: 263 FRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 ++ +++++ A+LFLD DNFK IND++GHA GD +L +A+RL Sbjct: 539 VLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDED 598 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEH 381 R GGDEF +V+ DV E EV + L ++F PF + G + +T SIG + + Sbjct: 599 TVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIK-GQEVFITPSIGVTLYPDD 657 Query: 382 A-SAEKLQELADHNMYQAKHQRAEKL 406 L + AD MYQ+K + Sbjct: 658 GQDPASLVKNADMAMYQSKAKGRNSY 683 >UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC12_KANKD Length = 629 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 9/282 (3%) Query: 133 IRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEA---L 189 + + G V++ + ++ + L S + +HL + + Sbjct: 83 VTMDAGYDGIVQVNSDGIPTAYNDTVLKMLNLTARELQSLSYRKICQHLFKNIKNPEVVI 142 Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEME---EWQLRLQAKNAQLL 246 + + + N ++ R E AL+ + + + L+ K + Sbjct: 143 NQLRKALMKQDDSGNILVEHNDGRFFECKAKALELDGQTQGLVWTIKDITDLKLKEREAR 202 Query: 247 RTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRV 305 A HD LT L NR F + ++ + ++ A++FLD D FK +NDT+GHA GD + Sbjct: 203 YLAYHDELTNLPNRTLFFERLEHALDLAKRKEELLAVIFLDLDEFKTVNDTFGHAQGDLL 262 Query: 306 LIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGH 365 L ++AKR+ RLGGDEF ++L DV+ + + + + P L + Sbjct: 263 LQKVAKRILVALREHDTFARLGGDEFVIMLEDVEDREAIVNVLDRVKHALDTPITLG-TN 321 Query: 366 QTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 Q +T S+G A+ E A+ L + AD MY +K Sbjct: 322 QVYITPSLGVAIYPEDGDDAQDLLKKADMAMYNSKKHGKNTY 363 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 14/233 (6%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + + ++ I + H +F +S I EF + D + +A Sbjct: 198 FIDKIKKSKSIIFERTHTHIKGYDFPVEISISYI-EFEEKTYVLAVMRD-----ISQRKA 251 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGH 299 + + A +D LTGL NR + L++ + AL +LD D FK +ND +GH Sbjct: 252 DEKLIWQQANYDHLTGLPNRRLLLDRLEQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGH 311 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEV-----QQICSALTQI 354 A GD +L ++AKRL + RLGGDEF +++ +++ E + ++I A+ Sbjct: 312 AKGDLLLQDVAKRLTQCVRKSDTVARLGGDEFTIIIAELEDEDKANKITVERIAQAILNA 371 Query: 355 FNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQAKHQRAEKL 406 N PF L N Q ++ SIG E A+ ++ L AD MY AK Q Sbjct: 372 LNRPFKLDN-EQVYISASIGITFYPEDANFSDVLLNAADQAMYAAKKQGKNCF 423 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 90/253 (35%), Gaps = 23/253 (9%) Query: 176 TLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVS--------EERIAEFHRFALDFNSL 227 L R +H +K R+ + AE S Sbjct: 140 ALMRRVHPEDRVTVKKAIFQAFRTGVGYCMDHRIVLDDGVERIVSQHAELLSADDGRTSR 199 Query: 228 LDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLD 286 L ++ A HD LT L NR F + + + A+LFLD Sbjct: 200 LVGTVHDITERTLAEERIRYLAHHDTLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLD 259 Query: 287 GDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHK------------AYRLGGDEFAMV 334 D+FK +NDT GH GDR+L E A RL + R+GGDEF ++ Sbjct: 260 LDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRRSDTLTHASREDASPFISRMGGDEFTIL 319 Query: 335 LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADH 393 L D+ + ++ + + + + GH+ + SIG ++ ++L AD Sbjct: 320 LTDLAHPQDAARVSQRIITALSKRYVIG-GHEVFVGASIGISLFPSDGEDCDQLLRNADT 378 Query: 394 NMYQAKHQRAEKL 406 MY AK Sbjct: 379 AMYHAKELGRNTY 391 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 3/176 (1%) Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKY 292 + +L A HD LT L NR ++ ++ + + ++ A++F+D D FK+ Sbjct: 1068 DVTERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKH 1127 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 IND+ GHA GD +L ++A+RL + R+ GDEF VL D++ + + L Sbjct: 1128 INDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLM 1187 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKLV 407 +F PF L G MT S+G ++ + L AD MY+AK + Sbjct: 1188 TVFEEPFPL-EGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYC 1242 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 3/175 (1%) Query: 234 WQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKY 292 ++L A +D LTGL NRA + I + + + + ALLF+D DNFK Sbjct: 136 DITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKV 195 Query: 293 INDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALT 352 IND+ GH GD++L +A R R GGDEF ++L +++S + + + + Sbjct: 196 INDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDAEAVAQKIL 255 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L F L +G + ++ SIG ++ + L +D MY AK Sbjct: 256 NALQLHF-LIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNC 309 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 8/315 (2%) Query: 95 RDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISH 154 D + + + + + + + + V + + I+ Sbjct: 376 TDSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKITG 435 Query: 155 FIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERI 214 F + IL + I ++ + + +V + +S + ++ I Sbjct: 436 FDRDEVIGKNTRILQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAI 495 Query: 215 A-EFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNN 273 + + + + ++ L+ A+L A +D LT L NR FR + + Sbjct: 496 DFKKGQQPSGYVGVFADITS----LKETEARLDHLAHYDALTELPNRLLFRERLIHSLLM 551 Query: 274 SDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFA 332 S+ +K A+LFLD D FK INDT GH GD +L EIA RL + R+ GDEF Sbjct: 552 SERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFC 611 Query: 333 MVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELA 391 ++L D+Q ++V I + +F+ + N H ++ SIG A++ +++ A+ L + Sbjct: 612 LILEDIQDVTDVVPIVEKILSVFSQTIQI-NSHMLQISASIGVAISPDNSNDADALLSFS 670 Query: 392 DHNMYQAKHQRAEKL 406 D MY+AK Sbjct: 671 DSAMYEAKEAGRNTY 685 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 25/287 (8%) Query: 134 RHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNIT 193 H G + + S + S+ + ++ A+ ++ ++ +V LK + Sbjct: 273 LHEGLLLIGILPKEELLEESQRLGNSVGWIVLGTIVLLIFALLIS--MNVLMVRPLKQLM 330 Query: 194 DVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDP 253 V ++ N + ++ E + L F + +E ++ R A HD Sbjct: 331 GAVREIGRG-NLAPTIALSTSDELGKLGLSFQEMAGNLE-------KSRVRVERLAYHDS 382 Query: 254 LTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKR 312 LTGL NR + +++ + + A+LFLD DNFK +NDT GH GD++L+E+A R Sbjct: 383 LTGLPNRFRAHETLRCMISLAHRESRRMAVLFLDLDNFKRVNDTLGHQVGDQLLMEMAIR 442 Query: 313 LAEFGGLRHKA------------YRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFD 360 L RLGGDEF ++L +V S + ++ S + I LPF Sbjct: 443 LQVVLRAEDVIHQEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFY 502 Query: 361 LHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 N ++ SIG ++ + L + AD MYQAK Q Sbjct: 503 F-NENEIYSGCSIGISLFPSDGSDVDDLIKRADAAMYQAKSQGRNNF 548 >UniRef50_A1ATR3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ATR3_PELPD Length = 754 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 4/189 (2%) Query: 220 FALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK- 278 A F+ + + + A HD LT L N+ F+ + + +S Sbjct: 269 LARCFSGTYGVARDITD-RKIAEETIAFQAFHDHLTHLPNQRLFKDRLEMAITHSKRHGG 327 Query: 279 TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 ++F+D D FK +NDT GHA GD +L +A RL R GGDEF ++L D+ Sbjct: 328 MVGVMFIDLDRFKIVNDTHGHAAGDELLKNVAHRLRHCIRAVDTLARKGGDEFTVLLPDL 387 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQ 397 + I + +PF + G + ++ SIG A+ S + L + AD MY+ Sbjct: 388 MRAEDAALIAEKIMHELGIPFSVA-GQKFHVSASIGIAIVPRDGESIDTLLKSADIAMYR 446 Query: 398 AKHQRAEKL 406 K Sbjct: 447 VKASGKNGY 455 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 9/219 (4%) Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 K + + H + R F VS + F + N + + +L + Sbjct: 281 KQVFETRHQRKDGRIFPVEVSASQ----CLFNNEENHVA--FVRDITIRKKYEKELEHQS 334 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDTWGHATGDRVLIE 308 HD LTGLANR I + +++ ++ +A+ LD D FK IND+ GH+ GD VL+ Sbjct: 335 NHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLA 394 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 +A+RL+ RLGGDEFA+V+ V ++ + + + F PF L N + Sbjct: 395 VAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGN-RELR 453 Query: 369 MTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 +T SIG ++ +E L AD MYQAK Q Sbjct: 454 ITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGF 492 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 2/175 (1%) Query: 233 EWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFK 291 + A + A HD LT L NRA FR ++ + + + A++F+D + FK Sbjct: 259 RDITDRKESEAFINFQAYHDLLTRLPNRALFRDRVDVAIAQAQRQGHPLAVMFIDLNRFK 318 Query: 292 YINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSAL 351 IND+ GH GDR+L +A+RL R GGDEF ++L + + + + Sbjct: 319 VINDSLGHTIGDRLLQAVAQRLLGCIRKGDTLSRFGGDEFTLLLPQISRQEAAVDVAEKI 378 Query: 352 TQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAEK 405 + N PF L H+ + SIG A+ E E L AD MY+ K+ Sbjct: 379 LESLNEPFHLGGDHELYVGASIGIAIYPEGGDTLETLIRHADIAMYREKNTGKNG 433 >UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT0_9GAMM Length = 812 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 108/283 (38%), Gaps = 15/283 (5%) Query: 138 ETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVH 197 + ++ L I F A C + L H + VE L I V Sbjct: 260 NRVPQLILAVNSEGIVLFCNRKFAEFYSCRIDEVAGLSLLQLHNVDHEVEELNQIRRSVE 319 Query: 198 DVRSNRNFSRRVSEERIAEFHRFALDFNSLL-------DEMEEWQLRLQAKNAQLLRTAL 250 ++ + + + + F++ + + + + A Sbjct: 320 VNQTEEAVTDFIWSSQTGKKLHFSITAAPFVYFSEPATLFVATDISEQKMVQDHISYMAN 379 Query: 251 HDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEI 309 HD LTGL NRA + + S AL+F+D D+FK IND+ GH GD +L ++ Sbjct: 380 HDTLTGLPNRALLNDRLEQALAASRRSGDLNALMFIDLDHFKNINDSLGHGVGDLLLKKV 439 Query: 310 AKRLAEFGGLRHKAYRLGGDEFAMVLYDVQS-----ESEVQQICSALTQIFNLPFDLHNG 364 A+ L RLGGDEF ++L QS +V+++C L I + P ++ Sbjct: 440 AEILINEVRSCDTVARLGGDEFVILLQAFQSDVDQVTQDVERVCHKLLTILSQPIEVKQ- 498 Query: 365 HQTTMTLSIGYAMTI-EHASAEKLQELADHNMYQAKHQRAEKL 406 HQ + SIG + + + L AD MY AK Sbjct: 499 HQLRIGASIGVVLFPMADKTLDDLMRFADTAMYHAKENGRNGF 541 Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 88/261 (33%), Gaps = 18/261 (6%) Query: 14 FKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEA----AVV 69 K L LI +L VL Q L T + + + AV Sbjct: 7 IKNRLAFRLAKYTVFIAFLIGFVLGTAQVLEDFQEQDSQLDETIDKILDASKPPAIRAVH 66 Query: 70 FADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWL----- 124 D A E + L Q A++ D+ +LA T + +I+ + Sbjct: 67 TLDQALAQEVVFGLIQYPFIIKAKITDELGEVLAE---QTASVSRTQTKWITEAISEHQK 123 Query: 125 -FPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHN 183 + + P N E + + +D ++ F +LAVL I+ +AI + H Sbjct: 124 QYLLDLKAPEYANIEPGKLLVVIDQDQALQPFYERALAVLLSGIVRNVLLAIFMIAIFHV 183 Query: 184 GLVEALKNITDVVHDVRSNRNFSRRVSEE---RIAEFHRFALDFNSLLDEMEEWQLRLQA 240 L + L + ++ +N + S + E N ++ +++ + + Sbjct: 184 VLTKPLALLAKQFFELDPTKNRGKSFSVPKEHKETELGLLCSSGNEFVETVQQLLIENRE 243 Query: 241 KNAQLLRTALHDPLTGLANRA 261 + L R+ L L NR Sbjct: 244 NHHALERSEN--SLKQLINRV 262 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 8/229 (3%) Query: 181 LHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQA 240 + L E ++ + + F+ + I + + L + SL ++ L+ Sbjct: 356 MWKSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITA----LKK 411 Query: 241 KNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGH 299 + QL + A +D LTGL NR + + + K A+ F D D FK +NDT GH Sbjct: 412 QQQQLEKIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTHGH 471 Query: 300 ATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF 359 + GD++LIE+A+R + RLGGDEF +VL D+ S E + L + + P Sbjct: 472 SIGDKLLIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAISKPI 531 Query: 360 DLHNGHQTTMTLSIGYAMTI--EHASAEKLQELADHNMYQAKHQRAEKL 406 N + ++ SIG + A++L AD MY AK + Sbjct: 532 -FMNHTEICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNRY 579 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 4/214 (1%) Query: 195 VVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPL 254 V +V R V E + + +A A++ R A +D L Sbjct: 516 SVEEVELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQL 575 Query: 255 TGLANRAAFRSGINTLMNNS-DARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 TGL NR+ + + + R A++F D D+FK INDT GH GDR+L+E+A+RL Sbjct: 576 TGLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRL 635 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 RLGGDEF +L D ++ + L + P L + + T+T SI Sbjct: 636 ESVLRGGDTVCRLGGDEFVFLLPD-TDAEGAARVAAKLLEAVAQPLVL-DHQELTVTPSI 693 Query: 374 GYAMTIEHASA-EKLQELADHNMYQAKHQRAEKL 406 G AM + + + L AD MYQAK + Sbjct: 694 GIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGF 727 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 7/209 (3%) Query: 200 RSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN 259 R ++ S I + L + ++ E + ++ A HD LTGL N Sbjct: 277 RHGNEYAIEDSAAPIRDQDGNVLGVVLVFHDVSEA----RNMANKMTYLAEHDYLTGLPN 332 Query: 260 RAAFRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGG 318 R +N + + + AL+FLD D+FK IND+ GH GD++L +A+RL Sbjct: 333 RLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLR 392 Query: 319 LRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMT 378 R GGDEF ++L ++ + ++ L +P+++ + H+ T++ SIG A+ Sbjct: 393 ASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGS-HEITVSASIGIAVF 451 Query: 379 IEHASAEKLQ-ELADHNMYQAKHQRAEKL 406 + +L + AD MY AK Sbjct: 452 PDDGENGELLTKNADAAMYHAKSLGRNNY 480 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%) Query: 201 SNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANR 260 N +++ E +A + D + + + +L+ A HD LTGL NR Sbjct: 224 ERENGAQQSVELFLAPVENESGDVTHFIGVLNDVTA-RTHAEKRLIHQASHDALTGLPNR 282 Query: 261 AAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLR 320 I + S + +A++FLD D FK +ND++GHA GD ++ E+A R++ Sbjct: 283 NLLNDRITHAIARS-RGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAG 341 Query: 321 HKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE 380 RLGGDEF ++L D+ S + ++ + L + + + + ++ SIG A+ Sbjct: 342 DTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGS-LELPLSASIGVALAPR 400 Query: 381 HA-SAEKLQELADHNMYQAKHQRAEKLV 407 E L + AD MY+AK + Sbjct: 401 DGRDPEMLLKNADIAMYRAKERGRNNYC 428 >UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V87_PSEA6 Length = 1524 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 4/188 (2%) Query: 221 ALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KT 279 D +S L + + + L++ A D LTGL NRA ++ + + T Sbjct: 1071 VTDIDSYLIILSDI-SEHKKAQQALIKLANFDALTGLPNRALLLDRVDHAIYQAQRSAST 1129 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 L F+D D FK +ND+ GH GD +L EI+ RL RLGGDEF +++ +V Sbjct: 1130 LGLFFIDLDKFKQVNDSLGHNAGDTLLQEISARLLNLLRKEDTIARLGGDEFVVLIENVH 1189 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQA 398 + ++ + S + +I + P L N H +++ SIG A+ + A A++L + AD MY A Sbjct: 1190 TIDDLTHLASQIIEIIDTPVQLEN-HLVSVSSSIGIALYPDDAQDAQELLQNADIAMYHA 1248 Query: 399 KHQRAEKL 406 K Sbjct: 1249 KENGRSHF 1256 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 3/178 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDN 289 + + QL A +D LTGL NR F ++ +++ T A++F+D D Sbjct: 234 IVRDISESKRTQQQLHFLAHYDTLTGLPNRLLFNESLHQAQTHANRTSDTIAVMFIDLDR 293 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK INDT GH GD++L ++ R++ R+GGDEFA+VL +V+ ES+ + Sbjct: 294 FKNINDTLGHGIGDKLLQQVGNRISLCIRESDTVARMGGDEFAVVLVNVREESDAAVVAE 353 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMT-IEHASAEKLQELADHNMYQAKHQRAEKL 406 + LPF + H+ + SIG + L E AD MY AK + Sbjct: 354 KIIDALRLPFMVGE-HEVFVGASIGITFYRPGQDDRDVLLEKADVAMYHAKERGRNNF 410 >UniRef50_B4S2A8 Intracellular signaling protein (GAF,GGDEF,EAL domains) n=3 Tax=Alteromonadales RepID=B4S2A8_ALTMD Length = 866 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 160/395 (40%), Gaps = 40/395 (10%) Query: 43 LTLKQYAQKNLALTAATMTYSLE-AAVVFADGPA----ATETLAALGQQGQFSTAEVRDK 97 L + ++ + + E AA + D A E LA L + +K Sbjct: 219 LQEEILERQKVESLQQALFEISELAANLEGDMNAFYSSLHEILARLISAPN-CYIAIHNK 277 Query: 98 QQNILA--------SWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARD 149 ++++L + G + F+ I P G++ ++ Sbjct: 278 EKDLLEFPYFSDAKQDQINARPLGLGLTEFVLRTGQAELINPPKVLELAESGDLDVSVAQ 337 Query: 150 SSISHFIWFSLAVLTGCILLASGIAIT--------------LTRHLHNGLVEALKNITDV 195 + ++ + + L +A IA+ L R + + + A++ + Sbjct: 338 NMLNSANSWLGSPLVVDGEIAGVIAVQTYGKHAKYNARDQELLRFVSHHIAVAIERKRNT 397 Query: 196 VHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 R N RV ER AE +R +++ + +L+ A HD LT Sbjct: 398 ESMQRYNVELEERVK-ERTAELNRTNKF-------LKQQIEERKEIELKLIHDAHHDSLT 449 Query: 256 GLANRAAFRSGINTLMNNSDA--RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL 313 L NRA F S + + + A+LF+D D FK INDT GH GD LIE+A+R+ Sbjct: 450 DLPNRAMFTSRLELAIASKQRYSENMFAVLFIDLDRFKVINDTLGHHAGDEFLIEVARRI 509 Query: 314 AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSI 373 A RLGGDEF ++L + + E +V+++ S + + PF L +G + S+ Sbjct: 510 ALCIRGHDLLARLGGDEFVVLLDNFEDEDDVEEVASRIISSISEPF-LLDGREMYSGASV 568 Query: 374 GYA-MTIEHASAEKLQELADHNMYQAKHQRAEKLV 407 G A + + SA+++ AD MYQAK + V Sbjct: 569 GIAHIETYYRSADEVLRDADAAMYQAKTLGRGRFV 603 >UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U2V9_MARAV Length = 908 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 6/232 (2%) Query: 177 LTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQL 236 L R + K + V VR R + A N ++ + + Sbjct: 407 LQRGFEESMASPGKQMPVVRARVRDADGQWRDMEGTFTAMLS--VPGVNGVVLSLRDLT- 463 Query: 237 RLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYIND 295 +L+A ++L R A +DPLTGLANR FR +N ++ S + +AL+FLD D FK IND Sbjct: 464 QLKAAQSELHRLAFYDPLTGLANRQLFRDRLNHVVRRSRRSGEAAALMFLDLDGFKRIND 523 Query: 296 TWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIF 355 T GH GD +L ++A+ L RLGGDEF ++L + ++ + + Sbjct: 524 TLGHDAGDELLRQVAQWLEGCVREEDSVARLGGDEFVVLLSRISGSEAAGKVAENILRRL 583 Query: 356 NLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 L N H+ +T+SIG M + A L + AD MY+AK Sbjct: 584 CQRIRL-NDHEVGVTVSIGITMIPHDSEDAGALMKYADLAMYRAKELGRNTY 634 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 124/311 (39%), Gaps = 9/311 (2%) Query: 98 QQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIW 157 Q I++S + + + + + + I + + S ++ + Sbjct: 577 QGIIISSENISARKQAEEELRLAHTVFEHSSEAMLVTDADNNI--ITINPAFSEMTGYSL 634 Query: 158 FSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEF 217 + IL + + L N L + + ++ + +S ++ ++ I Sbjct: 635 EEVIGKNPKILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSE 694 Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA- 276 +L ++ + +A + A +D LT L NR F + + S Sbjct: 695 DGKLFRRVALFSDIT----EKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHD 750 Query: 277 RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 ALLF+D D FK +NDT GH+ GD +LIE + R+ RLGGDEF +++ Sbjct: 751 HSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIA 810 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAE-KLQELADHNM 395 ++ S + I + P+DL G ++ SIG + E A+ +L + AD M Sbjct: 811 NLPDPSVMTLIAQRVLDALAAPYDL-EGEIVYLSASIGITVFPEDATTSAELLKNADQAM 869 Query: 396 YQAKHQRAEKL 406 Y+AK + Sbjct: 870 YEAKKNGRNRF 880 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 101/248 (40%), Gaps = 8/248 (3%) Query: 166 CILLASGIAITLTRHLHNGLVEALKNITDVVHD-VRSNRNFSRRVSEERIAEFHRFALDF 224 C+LL +H L ++ + + +R R S + A Sbjct: 349 CVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQV 408 Query: 225 ----NSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT- 279 + L M + +LL A HD LTGL NR+ +N + + R Sbjct: 409 PHGDDQALCLMFHDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQM 468 Query: 280 SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQ 339 ALL D DNFK +NDT GH GD++L +A R+ F RLGGDEF +VL ++ Sbjct: 469 VALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLT 528 Query: 340 SESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNMYQA 398 + + + + +PF L G + +T S+G ++ + E L + AD MY Sbjct: 529 RMDDAVTVAESFRNLLAMPFFLG-GREIFITASMGISLFPDDGDTMEALIKKADTAMYHI 587 Query: 399 KHQRAEKL 406 K Sbjct: 588 KESGRNSF 595 >UniRef50_Q3A5N0 Sensory box/GGDEF family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5N0_PELCD Length = 808 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 9/203 (4%) Query: 206 SRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRS 265 R+ R + F ++ ++ + + Q+ + A +D LTGL NR + Sbjct: 568 DVRLWLGR--DQGDAVTHFQGVMLDVSD----RKKAQEQVRQLAFYDALTGLPNRTLLAN 621 Query: 266 GINTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAY 324 ++ + + ALL+LD D FK INDT+GHA GD VL A+RL Sbjct: 622 RLDQSLAQAQRDGRMLALLYLDLDRFKEINDTYGHAAGDMVLQAAAQRLNSCIRRNDTVA 681 Query: 325 RLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS- 383 RLGGDEF ++L +++ + + + ++ +PF + Q +T SIG + EH Sbjct: 682 RLGGDEFVVLLPGLENVDQPTTVAEKILKVMKVPFQV-ESQQLNVTPSIGMVLYPEHGQE 740 Query: 384 AEKLQELADHNMYQAKHQRAEKL 406 L + AD MY AK + Sbjct: 741 LGVLLKRADIAMYAAKSRGRNGY 763 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 63/192 (32%), Gaps = 6/192 (3%) Query: 55 LTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYT-RKDPG 113 L + Y ++A++ D L Q+ + + + Y R Sbjct: 271 LISPLTRYDGKSAILNEDRQ-IQIVAHRLLQKASQLSRRPHSNDEIPVIFEQYPWRHRAE 329 Query: 114 DTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGI 173 + + + + P I + + + ++ ++ L + Sbjct: 330 EPYRAKLVAVTYFEPWDWVIVAGAYRDDYADI---QNRFVDSLSRTVLSISAAALGIVLL 386 Query: 174 AITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEE 233 ++ + ++ G+V L+ + + R R ++ + E + A F+ ++D +++ Sbjct: 387 SLVIGFYVSRGIVRPLERAIALFERIGKGR-LDRHLNMTQGDEIGQLARAFDRMIDNLKD 445 Query: 234 WQLRLQAKNAQL 245 N ++ Sbjct: 446 VTASRNELNREI 457 >UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5T0_9GAMM Length = 1410 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 7/265 (2%) Query: 143 VRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSN 202 V + S I+ + + IL + + + + L E ++ + ++ Sbjct: 754 VDVNPAFSEITGYSREEVIGKNPSILQSDKHSRVFFQEMWTSLEEKGHWQGEIWNLKKNG 813 Query: 203 RNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAA 262 + F+ ++ + + L + L ++ + + + L A +D LT L NR Sbjct: 814 QLFAELLTISTLVDERGETLHYLGLFSDITQS----KEQQHALELMAHYDMLTQLPNRTL 869 Query: 263 FRSGINTLMNNSDARKTS-ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRH 321 F + + +S + A++FLD D FK +ND +GH GD++LIE+A+R+ Sbjct: 870 FADRFHQAIAHSKRNHSLLAVVFLDLDGFKPVNDRYGHDVGDQLLIEVAQRIKASIRQDD 929 Query: 322 KAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-E 380 A RLGGDEF ++L D+ S +++ + + LP+ L +++ S+G + + Sbjct: 930 TASRLGGDEFVLLLNDISSVDHCERLINRIRHAIELPYQLDED-TISLSASLGITIYPLD 988 Query: 381 HASAEKLQELADHNMYQAKHQRAEK 405 A A+ L AD MYQAK ++ Sbjct: 989 DADADTLLRHADQAMYQAKLAGRQR 1013 >UniRef50_Q21VJ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VJ9_RHOFD Length = 735 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Query: 231 MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDN 289 + + + + A HD LT L NR F+ + + + + AL+F+D D Sbjct: 292 VARDITDRKRADELITYQAYHDILTDLPNRVLFKDRLGLAVLQAKRNDASLALMFIDLDR 351 Query: 290 FKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICS 349 FK +NDT GH GD++L + A RL RLGGDEF VL ++ + I Sbjct: 352 FKLVNDTLGHVIGDKLLQQAAIRLKACLRSGDTLARLGGDEFTAVLPELSDRQDAVLIAE 411 Query: 350 ALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEK 405 + PF L G ++ SIG A+ S ++L +D MY K + Sbjct: 412 KFLECLRQPFQLA-GQSVHISASIGIAIYPGDGESTDELIRNSDIAMYHMKAEGKNG 467 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 137/351 (39%), Gaps = 14/351 (3%) Query: 58 ATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFS 117 + + A V+ + L ++ Q AE+ + LA + + ++ + Sbjct: 448 RNLNQVVAAVVLVGNK------LDPEDREQQALIAELGSDMSHALAQFTREAQ-WQESLA 500 Query: 118 NFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITL 177 H + V + + I+ + ++ +L + Sbjct: 501 RTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSETEAVGMSPRLLQSGRHEPAF 560 Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 L N L+ + +V + ++ +++ +S + + H + S+ ++ Sbjct: 561 FTRLWNQLLTHGRWQGEVQNRRKNGELYTQWMSVSTVRDEHDQPTHYVSVFTDITPQ--- 617 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA-RKTSALLFLDGDNFKYINDT 296 + +L A DPLT L NR S + + ++ + A+LF+D DNFK +ND+ Sbjct: 618 -KEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLFIDLDNFKTVNDS 676 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFN 356 GH+ GD +L +A RL RLGGDEF ++L ++ + Q+ L + Sbjct: 677 LGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQDAAQVAQELIGLLE 736 Query: 357 LPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF + G + + SIG ++ + +L AD MYQAK Sbjct: 737 TPFRVA-GQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGRGVY 786 >UniRef50_B3E6U2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E6U2_GEOLS Length = 768 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 4/217 (1%) Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTA 249 + + + + + N + V E+ + F L+ + L+ AQ+ A Sbjct: 390 RQPVRLEYRIMTADNKEKWVLEQGVPVFDTEGS--VQALEGIIVDISELKQIEAQIQHLA 447 Query: 250 LHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTWGHATGDRVLIE 308 +D LT L NRA F I+ + ++ AL F+D D FK IND GH TGD +L Sbjct: 448 SYDNLTSLPNRALFSDRIDRALLSAQRNSSKLALFFIDLDQFKPINDELGHDTGDWLLQA 507 Query: 309 IAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTT 368 A+R+AE R+GGDEFA++L ++ + + + + + N PF +G Sbjct: 508 AAQRMAESVRESDTVARIGGDEFAVLLQNIATAQDARTVAEKIRTTLNRPFITPSGVTLH 567 Query: 369 MTLSIGYAMTIEHASAE-KLQELADHNMYQAKHQRAE 404 ++ SIG A+ E + L AD MY+AK + Sbjct: 568 ISCSIGVALYPEDGDNQRDLLRAADEAMYRAKKRGRN 604 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 120/310 (38%), Gaps = 9/310 (2%) Query: 98 QQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIW 157 +++ T + D + + I I + + I+ + Sbjct: 132 DGSLIVFQDITERKRTDEALRLWASVFANSREGIAITDRNGII--LDVNEAFVRITGYGR 189 Query: 158 FSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEF 217 + IL + + L +A ++ + + + + ++ + + Sbjct: 190 EEVIGQNPRILQSGRHDSAFYAGMWESLYKASNWCGEIWNRRKDGEIYPQWLNISAVRDE 249 Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDAR 277 + S+ ++ ++++ +L A DPLTGLANR + + S Sbjct: 250 ESEVSHYISVFMDLS----QIKSNEKRLELLAYFDPLTGLANRTLLADHMRMAIARSRRE 305 Query: 278 KT-SALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 T AL +LD D FK +ND +GH GD+ L EIAKR+ RLGGDEF +++ Sbjct: 306 STLFALGYLDLDGFKPVNDQFGHEVGDQFLQEIAKRIKSVVRGDDTVARLGGDEFVILVQ 365 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTI-EHASAEKLQELADHNM 395 ++ E L P L NGH T T SIG + + A + L ADH M Sbjct: 366 GLRKPEECHHTFERLLAKLEEPIQL-NGHHLTATGSIGVTLFPCDEADPDTLLRHADHAM 424 Query: 396 YQAKHQRAEK 405 YQAK + Sbjct: 425 YQAKEAGKNR 434 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 7/251 (2%) Query: 158 FSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEF 217 + L+ LLA+ +A L N + + + + F V+ + Sbjct: 377 DEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVHNE 436 Query: 218 HRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA- 276 H F S+ +++ + + A L A HD LTGL NR R + + + Sbjct: 437 HGEIAHFISVFNDVTD----RKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATRE 492 Query: 277 RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLY 336 A+L LD D FK +ND GH GD ++ +A R+++ RLGGDEF ++ Sbjct: 493 HTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILST 552 Query: 337 DVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHAS-AEKLQELADHNM 395 D++ E + L + F + NGH+ + SIG AM + ++L AD M Sbjct: 553 DIRDERAAATLAQKLLRQFRQKVAI-NGHEIIASASIGIAMFPKDGDNGDELFRNADTAM 611 Query: 396 YQAKHQRAEKL 406 Y+AK Sbjct: 612 YRAKDVGRNGF 622 >UniRef50_Q8YXJ4 All1219 protein n=4 Tax=Nostocaceae RepID=Q8YXJ4_ANASP Length = 737 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 3/189 (1%) Query: 220 FALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK- 278 + E+ L+ K L A HD LTGL NR F + +N + Sbjct: 540 MEEELKRTAAELFRSNNELKLKEDHLRYLAYHDALTGLPNRKYFAEQLYESINWAKDNNL 599 Query: 279 TSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDV 338 + LLF+D D FK +ND+ GH GDR+L+ IA+RL+ RLGGDEF ++L + Sbjct: 600 SLGLLFIDLDGFKQVNDSLGHEMGDRLLVVIAQRLSNSLRASDTVARLGGDEFTVILQAI 659 Query: 339 QSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQ 397 + ++ + P L NG +++SIG ++ E + + L + AD MY+ Sbjct: 660 PNVQVAAKVAEKILANITEPIVL-NGCTAKVSVSIGISIYPETSLDPDTLLKKADAAMYR 718 Query: 398 AKHQRAEKL 406 AKH + Sbjct: 719 AKHLGKNRF 727 >UniRef50_C7LQB7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Deltaproteobacteria RepID=C7LQB7_DESBD Length = 556 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 7/223 (3%) Query: 190 KNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQ----L 245 + + VV R + +V + +E + N L + + L Sbjct: 64 EEVLKVVKKALRVRKNAEKVKIDSCSEMETTLREANEKLVVASVNAHMMTEAVERVSVHL 123 Query: 246 LRTALHDPLTGLANRAAFRSGINTLMNNSDAR-KTSALLFLDGDNFKYINDTWGHATGDR 304 A HD LTGL NRA + + + AL+FLD D+FK+IND+ GH GD+ Sbjct: 124 SYMAEHDLLTGLPNRALLTDRLVQSILLAKRHGNKVALMFLDLDHFKHINDSLGHGIGDQ 183 Query: 305 VLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNG 364 +L +AKRL R GGDEF ++L +V+ L P + G Sbjct: 184 LLQSVAKRLQASVRNSDTVSRHGGDEFVVLLPEVEDVQSAAHAAEKLIHSVGEPHFIS-G 242 Query: 365 HQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 + +TLS+G +M + AE L AD MYQAK Sbjct: 243 QELRVTLSVGISMYPDDGVDAEALMRKADMAMYQAKKAGRNSY 285 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 11/235 (4%) Query: 178 TRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLR 237 +H+ L + +++ ++ + V + + + F ++ Sbjct: 911 LKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDIS----E 966 Query: 238 LQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDGDNFKYINDT 296 +A ++ R A +D LT L NR F+ ++T + ++ L+FLD D FK IND+ Sbjct: 967 RKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDS 1026 Query: 297 WGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSES----EVQQICSALT 352 GHA GDR+L E+A RL+ R+GGDEF ++L Q+ + Sbjct: 1027 LGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELIL 1086 Query: 353 QIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L G + +T SIG A++ + L + AD MY AK Sbjct: 1087 GRLARPFTL-EGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNF 1140 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 23/336 (6%) Query: 76 ATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRH 135 T L + + A V + ++ ++D +T + I Sbjct: 139 LTTMLQPVLAH--LAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMITDAKGNI-- 194 Query: 136 NGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDV 195 V + + I+ + + +L + T R + + ++ ++ Sbjct: 195 -------VEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILANGHWEGEI 247 Query: 196 VHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLT 255 ++ + ++ + + L + + ++ + + AQ+ + A +DPLT Sbjct: 248 WDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVT----KRKEAEAQIHQLAFYDPLT 303 Query: 256 GLANRAAFRSGINTLMN-NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLA 314 L NR + + + + A+LFLD DNFK +NDT GH GD++LIE+AKRL Sbjct: 304 ELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLN 363 Query: 315 EFGGLRHKAYRLGGDEFAMVLYDVQSESE-----VQQICSALTQIFNLPFDLHNGHQTTM 369 RLGGDEF +VL + S + + + + P+ L N H Sbjct: 364 SCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQLAN-HVHRT 422 Query: 370 TLSIGYAMTIEHASA-EKLQELADHNMYQAKHQRAE 404 T SIG M H + E++ + AD MYQAK Sbjct: 423 TPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRN 458 >UniRef50_C5V7W9 Diguanylate cyclase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7W9_9PROT Length = 574 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 25/298 (8%) Query: 131 QPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALK 190 P+ G I + + + ++ L +L + + + + +L N + L Sbjct: 269 LPVMGEGRRIATIAVLSSQEAVLKNTRQMLEILGLIAISSLVVILPFAWYLANSISRPLT 328 Query: 191 NITDVVHDVRSNRNFSRR----VSEERIAEFHRFALDFNSLL------------------ 228 ++ V V S R R ++ R E A F ++ Sbjct: 329 LLSRVFRGVASGRGMVNRELAELAGHRGDEMGELAESFFAMSQAVKQKIQQINEINASLE 388 Query: 229 DEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKT-SALLFLDG 287 D + + LQ N +L + A HD LTGL NR + ++ + KT AL+F+D Sbjct: 389 DSVAQRTRELQIANDELTKLATHDALTGLPNRQLVNDRLLQALSAARREKTTMALMFIDL 448 Query: 288 DNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQI 347 D FK +ND +GHA GD +L E A+R+ E R+GGDEF ++L +++E + + Sbjct: 449 DEFKPVNDKYGHAVGDLLLKEAARRIHECLRKSDTVARIGGDEFIVLLPVIETELDACGV 508 Query: 348 CSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAE 404 + NLPF L G Q +++ SIG A+ EH L + AD MYQAK+ Sbjct: 509 AEKIRASLNLPFYLS-GEQLSISSSIGIAIYPEHGLDEHALCQHADIAMYQAKNSGRN 565 >UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWY3_RHORT Length = 683 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 119/290 (41%), Gaps = 15/290 (5%) Query: 127 APIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIA---ITLTRHLHN 183 P+ Q + +G + + + + + A A T +LH Sbjct: 135 EPVSQSALFDHIPLG--VMLSDGLGRIAYANPAFLAEDIAAVRALLGATPQALATGYLHE 192 Query: 184 GLVEALKNITDVVHDVRSNRNFS-----RRVSEERIAEFHRFALDFNSLLDEMEEWQLRL 238 GL L R++ + R S I R + L+ +E Sbjct: 193 GLARTLWEDLLCGRVWRNDVDLPTADGQRTHSRLTIIPLRRDDGAVDRLMTVIEPRSP-- 250 Query: 239 QAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARK-TSALLFLDGDNFKYINDTW 297 A ++Q + HD LTGL NR F+ + T + ++ R A+LF+D D+FK +ND+ Sbjct: 251 -ATDSQAWQQVNHDTLTGLPNRVLFQDRLLTALASARRRNDQLAVLFVDLDHFKTVNDSL 309 Query: 298 GHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNL 357 GH+ GD++L ++A RL++ R+GGDEF + L + + I + + + Sbjct: 310 GHSFGDQLLQQVATRLSQCLRDSDTLARMGGDEFTIALTGDGHQRDYAMIANRILETLRR 369 Query: 358 PFDLHNGHQTTMTLSIGYAMTIEHA-SAEKLQELADHNMYQAKHQRAEKL 406 PF L GH+ + SIG + A + L AD MY+AK Sbjct: 370 PFTLEGGHEVLIGSSIGITLFPNDAEDVDTLLRNADTAMYRAKASGRNAF 419 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.163 0.530 Lambda K H 0.267 0.0503 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,487,136,171 Number of Sequences: 3077464 Number of extensions: 145335578 Number of successful extensions: 503322 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 21912 Number of HSP's successfully gapped in prelim test: 10360 Number of HSP's that attempted gapping in prelim test: 421762 Number of HSP's gapped (non-prelim): 37367 length of query: 408 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 277 effective length of database: 637,248,572 effective search space: 176517854444 effective search space used: 176517854444 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 95 (40.9 bits)