BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (283 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 589 e-167 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 587 e-166 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 365 1e-99 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 313 5e-84 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 278 1e-73 UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=T... 204 3e-51 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 184 4e-45 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 182 1e-44 UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=P... 175 1e-42 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 173 7e-42 UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 160 5e-38 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 157 3e-37 UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family ... 130 6e-29 UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera a... 115 1e-24 UniRef50_B9MP59 Two component transcriptional regulator, AraC fa... 93 9e-18 UniRef50_C6CV61 Two component transcriptional regulator, AraC fa... 92 2e-17 UniRef50_D1N143 Transcriptional regulator, AraC family n=1 Tax=V... 92 2e-17 UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Rumi... 91 5e-17 UniRef50_C6CWB0 Two component transcriptional regulator, AraC fa... 91 7e-17 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 90 1e-16 UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-... 90 1e-16 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 89 1e-16 UniRef50_A3GSD5 Transcriptional regulator (Fragment) n=1 Tax=Vib... 89 2e-16 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 89 2e-16 UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=V... 88 3e-16 UniRef50_UPI0001C368F3 two component transcriptional regulator, ... 88 4e-16 UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. ora... 88 4e-16 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 87 8e-16 UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=O... 87 9e-16 UniRef50_B8I505 Two component transcriptional regulator, AraC fa... 87 1e-15 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 86 1e-15 UniRef50_A4XMG0 Two component transcriptional regulator, AraC fa... 86 1e-15 UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostri... 85 2e-15 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 85 3e-15 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 85 3e-15 UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. ora... 84 4e-15 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 84 4e-15 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 84 5e-15 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 84 6e-15 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 84 6e-15 UniRef50_B8I3I7 Two component transcriptional regulator, AraC fa... 84 6e-15 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 84 6e-15 UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-... 84 7e-15 UniRef50_C5DA17 Two component transcriptional regulator, AraC fa... 84 7e-15 UniRef50_C6LAZ8 DNA-binding response regulator, AraC family n=1 ... 84 8e-15 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 83 8e-15 UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. ora... 83 9e-15 UniRef50_C5EQZ1 Predicted protein n=1 Tax=Clostridiales bacteriu... 83 9e-15 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 83 9e-15 UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecali... 83 9e-15 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 83 1e-14 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 83 1e-14 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 83 1e-14 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 83 1e-14 UniRef50_D0KBE4 Two component transcriptional regulator, AraC fa... 83 1e-14 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 83 1e-14 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 82 1e-14 UniRef50_C6IXH7 Response regulator n=1 Tax=Paenibacillus sp. ora... 82 2e-14 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 82 2e-14 UniRef50_B8HZZ5 Two component transcriptional regulator, AraC fa... 82 2e-14 UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=... 82 2e-14 UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria Rep... 82 2e-14 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 82 3e-14 UniRef50_C6D659 Two component transcriptional regulator, AraC fa... 82 3e-14 UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 ... 82 3e-14 UniRef50_C0D1T3 Putative uncharacterized protein n=1 Tax=Clostri... 82 3e-14 UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostri... 82 3e-14 UniRef50_A5ZA57 Putative uncharacterized protein n=1 Tax=Eubacte... 81 3e-14 UniRef50_UPI0001B9ECC0 two component transcriptional regulator, ... 81 4e-14 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 81 4e-14 UniRef50_UPI0001C363ED two component AraC family transcriptional... 81 4e-14 UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostri... 81 5e-14 UniRef50_C4IBC7 Response regulator receiver protein n=1 Tax=Clos... 81 5e-14 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 81 5e-14 UniRef50_B8I4I1 Two component transcriptional regulator, AraC fa... 81 5e-14 UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protei... 81 5e-14 UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostri... 80 5e-14 UniRef50_C6CTB8 Two component transcriptional regulator, AraC fa... 80 6e-14 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 80 6e-14 UniRef50_Q9KB26 BH2109 protein n=1 Tax=Bacillus halodurans RepID... 80 7e-14 UniRef50_A8RP72 Putative uncharacterized protein n=1 Tax=Clostri... 80 8e-14 UniRef50_B8I947 Two component transcriptional regulator, AraC fa... 80 8e-14 UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C... 80 8e-14 UniRef50_UPI0001787D2D two component transcriptional regulator, ... 80 9e-14 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 80 9e-14 UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=C... 80 9e-14 UniRef50_UPI000178A190 two component transcriptional regulator, ... 80 9e-14 UniRef50_C9XJN0 AraC-family transcriptional regulator n=8 Tax=Cl... 80 9e-14 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 80 1e-13 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 80 1e-13 UniRef50_C6CXK7 Two component transcriptional regulator, AraC fa... 80 1e-13 UniRef50_UPI0001692E78 DNA-binding response regulator, AraC fami... 79 1e-13 UniRef50_C7GHF1 Putative two-component response regulator n=1 Ta... 79 1e-13 UniRef50_A9QDR4 Two component transcriptional regulator, AraC fa... 79 1e-13 UniRef50_C0D5F5 Putative uncharacterized protein n=1 Tax=Clostri... 79 1e-13 UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostri... 79 1e-13 UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Pae... 79 1e-13 UniRef50_C6J5N6 Two component transcriptional regulator n=1 Tax=... 79 1e-13 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 79 2e-13 UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillu... 79 2e-13 UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 79 2e-13 UniRef50_C6CVX2 Two component transcriptional regulator, AraC fa... 79 2e-13 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 79 2e-13 UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=... 79 2e-13 UniRef50_UPI000178A16B two component transcriptional regulator, ... 79 2e-13 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 79 2e-13 UniRef50_C6D214 Transcriptional regulator, AraC family n=1 Tax=P... 79 2e-13 UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminoc... 79 2e-13 UniRef50_A9U7S8 Predicted protein (Fragment) n=1 Tax=Physcomitre... 79 2e-13 UniRef50_C6LB63 Putative response regulator receiver domain prot... 79 3e-13 UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostri... 79 3e-13 UniRef50_C6D416 Two component transcriptional regulator, AraC fa... 78 3e-13 UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=... 78 3e-13 UniRef50_A8VRA4 Response regulator receiver protein n=1 Tax=Baci... 78 3e-13 UniRef50_B0NBQ5 Putative uncharacterized protein n=2 Tax=Clostri... 78 3e-13 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 78 3e-13 UniRef50_C6PAR6 Two component transcriptional regulator, AraC fa... 78 3e-13 UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecali... 78 3e-13 UniRef50_UPI0001788C2F two component transcriptional regulator, ... 78 3e-13 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 78 4e-13 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 78 4e-13 UniRef50_B6FJW1 Putative uncharacterized protein n=1 Tax=Clostri... 78 4e-13 UniRef50_D2EJS9 Transcriptional regulator n=1 Tax=Pediococcus ac... 78 4e-13 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 78 4e-13 UniRef50_C6CVW8 Two component transcriptional regulator, AraC fa... 78 4e-13 UniRef50_C6JC74 Two component transcriptional regulator n=1 Tax=... 78 4e-13 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 78 4e-13 UniRef50_C0BZ09 Putative uncharacterized protein n=1 Tax=Clostri... 77 5e-13 UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococ... 77 5e-13 UniRef50_C6JHI8 Response regulator receiver protein n=1 Tax=Rumi... 77 5e-13 UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=... 77 5e-13 UniRef50_UPI0001788F00 two component transcriptional regulator, ... 77 6e-13 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 77 6e-13 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 77 6e-13 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 77 6e-13 UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=... 77 6e-13 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 77 6e-13 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 77 6e-13 UniRef50_UPI0001788C87 two component transcriptional regulator, ... 77 7e-13 UniRef50_A5ZVU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 77 7e-13 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 77 7e-13 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 77 8e-13 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 77 8e-13 UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6... 77 8e-13 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 77 8e-13 UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostri... 77 8e-13 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 77 8e-13 UniRef50_C6LKL3 Putative response regulator receiver domain prot... 77 9e-13 UniRef50_UPI0001C350B3 two component transcriptional regulator, ... 77 9e-13 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 77 9e-13 UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bactero... 77 9e-13 UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 ... 77 9e-13 UniRef50_UPI0001C35FBC two component transcriptional regulator, ... 77 9e-13 UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostri... 77 9e-13 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 77 1e-12 UniRef50_C5RM76 Two component transcriptional regulator, AraC fa... 77 1e-12 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 77 1e-12 UniRef50_C6CXU8 Two component transcriptional regulator, AraC fa... 77 1e-12 UniRef50_UPI00017884AA transcriptional regulator, AraC family n=... 76 1e-12 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 76 1e-12 UniRef50_A8RP07 Putative uncharacterized protein n=1 Tax=Clostri... 76 1e-12 UniRef50_C9A517 Helix-turn-helix domain-containing protein n=3 T... 76 1e-12 UniRef50_C1I3E9 Response regulator receiver protein n=1 Tax=Clos... 76 1e-12 UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminoc... 76 1e-12 UniRef50_A6LW09 Response regulator receiver protein n=2 Tax=Clos... 76 1e-12 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 76 1e-12 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 76 1e-12 UniRef50_UPI0001C3522D two-component system, response regulator ... 76 2e-12 UniRef50_C6CZ56 Two component transcriptional regulator, AraC fa... 76 2e-12 UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepI... 76 2e-12 UniRef50_D2LWA9 Two component transcriptional regulator, AraC fa... 76 2e-12 UniRef50_C6IZZ6 Transcriptional regulator n=2 Tax=Paenibacillus ... 75 2e-12 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 75 2e-12 UniRef50_UPI0001C3678C two component transcriptional regulator, ... 75 2e-12 UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostri... 75 2e-12 UniRef50_UPI00017885E1 two component transcriptional regulator, ... 75 2e-12 UniRef50_A9U6D3 Predicted protein (Fragment) n=1 Tax=Physcomitre... 75 2e-12 UniRef50_UPI0001C360A5 transcriptional regulator, AraC family pr... 75 2e-12 UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 T... 75 2e-12 UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantell... 75 2e-12 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 75 2e-12 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 75 2e-12 UniRef50_UPI0001C36A4D two component transcriptional regulator, ... 75 2e-12 UniRef50_C6D7J5 Two component transcriptional regulator, AraC fa... 75 2e-12 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 75 3e-12 UniRef50_C6D151 Two component transcriptional regulator, AraC fa... 75 3e-12 UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacte... 75 3e-12 UniRef50_C6CT83 Two component transcriptional regulator, AraC fa... 75 3e-12 UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 T... 75 3e-12 UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=S... 75 3e-12 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 75 3e-12 UniRef50_UPI0001C34E1E two component AraC family transcriptional... 75 3e-12 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 75 3e-12 UniRef50_C5EE52 Two-component response regulator n=1 Tax=Clostri... 75 3e-12 UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=... 75 3e-12 UniRef50_B4AP12 Periplasmic binding protein n=1 Tax=Bacillus pum... 75 3e-12 UniRef50_C6D427 Two component transcriptional regulator, AraC fa... 75 4e-12 UniRef50_C6VNG3 Response regulator n=3 Tax=Lactobacillus plantar... 74 4e-12 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 74 4e-12 UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clos... 74 4e-12 UniRef50_C6CXB6 Two component transcriptional regulator, AraC fa... 74 4e-12 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 74 4e-12 UniRef50_A7B6I0 Putative uncharacterized protein n=1 Tax=Ruminoc... 74 4e-12 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 74 5e-12 UniRef50_C6CV07 Two component transcriptional regulator, AraC fa... 74 5e-12 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 74 5e-12 UniRef50_A8R814 Putative uncharacterized protein n=1 Tax=Eubacte... 74 5e-12 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 74 5e-12 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 74 5e-12 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 74 5e-12 UniRef50_UPI000178A110 transcriptional regulator, AraC family n=... 74 5e-12 UniRef50_UPI0001C36BEF two component AraC family transcriptional... 74 5e-12 UniRef50_C9S103 Two component transcriptional regulator, AraC fa... 74 6e-12 UniRef50_C5D6R8 Transcriptional regulator, AraC family n=7 Tax=B... 74 6e-12 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 74 6e-12 UniRef50_C6D165 Two component transcriptional regulator, AraC fa... 74 6e-12 UniRef50_UPI0001787F48 two component transcriptional regulator, ... 74 6e-12 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 74 6e-12 UniRef50_A6BDK1 Putative uncharacterized protein n=1 Tax=Dorea l... 74 7e-12 UniRef50_Q04H74 Transcriptional regulator, AraC family n=3 Tax=L... 74 7e-12 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 74 7e-12 UniRef50_Q9KBG9 BH1958 protein n=1 Tax=Bacillus halodurans RepID... 74 7e-12 UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Pae... 74 7e-12 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 74 7e-12 UniRef50_UPI0001C36345 two-component system, response regulator ... 74 8e-12 UniRef50_A9KTC8 Two component transcriptional regulator, AraC fa... 74 8e-12 UniRef50_UPI0001C34E2F two component transcriptional regulator, ... 74 8e-12 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 74 8e-12 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 74 8e-12 UniRef50_D1N8N1 Transcriptional regulator, AraC family n=1 Tax=V... 74 8e-12 UniRef50_UPI0001788EF7 two component transcriptional regulator, ... 73 9e-12 UniRef50_B0MFL4 Putative uncharacterized protein n=1 Tax=Anaeros... 73 9e-12 UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=C... 73 9e-12 UniRef50_UPI0001C35B7C two-component system, response regulator ... 73 9e-12 UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobac... 73 9e-12 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 ... 73 1e-11 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 73 1e-11 UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecali... 73 1e-11 UniRef50_C4G7K2 Putative uncharacterized protein n=1 Tax=Abiotro... 73 1e-11 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 73 1e-11 UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacte... 73 1e-11 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 73 1e-11 UniRef50_A9KL59 Two component transcriptional regulator, AraC fa... 73 1e-11 UniRef50_B1QT82 Two component transcriptional regulator, AraC fa... 73 1e-11 UniRef50_C0EGK3 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_Q03HR1 Transcriptional regulator, AraC family n=1 Tax=P... 73 1e-11 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust. Identities = 283/283 (100%), Positives = 283/283 (100%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust. Identities = 282/283 (99%), Positives = 282/283 (99%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYV AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 365 bits (936), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 174/280 (62%), Positives = 206/280 (73%), Gaps = 3/280 (1%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 M +D++ L+ + + ++YFA + QVDFPRL I+L G+ D G Sbjct: 1 MDNDINQLIDSFLKKQNGIGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENA 60 Query: 61 VP---GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 P DVLY+P WN PQWQAP S+LF KQ+L S+ W+GK + K+ RR Sbjct: 61 SPLEANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVEKRQALRR 120 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GSFLLQ LNE++MQPQEQ+TAR IV SLLSHC DLLGSQ QT+SRSQALFEAIR Y Sbjct: 121 GPRVGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTSSRSQALFEAIRQY 180 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 +D YA L+RESVAQAFY+SPNYLSHLFQK G +GFNEYLNH RLE A+ LLKG+D+KV Sbjct: 181 MDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKV 240 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 K++AHACGF DSNYFCRLFRK TERSPSEYRRQYHSQLTE Sbjct: 241 KDIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHSQLTE 280 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 313 bits (802), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 158/276 (57%), Positives = 199/276 (72%), Gaps = 6/276 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTG---AG 57 M D+ +L RLI L Q+ F + VP LA+ V FPRLEIVLEG+ + G A Sbjct: 1 MIEDLPDILHRLIGQKDHL-QVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAA 59 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 +TL VLYV AG W PQW PATT S+LFG+Q+LGFS+ +WDGK KQ V+R Sbjct: 60 STLTTLQVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWDGKCLHT-EKQSVSRL 118 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GS+LL +LNE+ +QP + TARL+VA+LLSHCR+ L SRS+ LF A++DY Sbjct: 119 GPRVGSYLLLSLNEVSLQP-DPLTARLVVAALLSHCREQLVGLEMRVSRSRDLFLAVQDY 177 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ++E + LTRESVA+ F+I+PNYLSH+FQK+G++GFNEYL RLE AK LL+GYDLKV Sbjct: 178 LEENLSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKV 237 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 KE+AH CGFVDSNYFCR+F++ TERSPSEYRR S Sbjct: 238 KEIAHNCGFVDSNYFCRVFKRYTERSPSEYRRHCRS 273 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/277 (51%), Positives = 184/277 (66%), Gaps = 9/277 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV---DTGAG 57 M +++ L+RL L+L ++ FAS+ A PRLEIV+ G + + G Sbjct: 1 MSLEIAPTLARLREASLALGEVLFASAL------AAPAQAPRLEIVIAGSLLRRDEHGRA 54 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 GDVLY+P+G AT S+LF KQ++ ++ QWDG Q Q + +ARR Sbjct: 55 YRQRCGDVLYLPSGEQRQITGDEEATLLSLLFAKQRIVLTLWQWDGAQLQRRQQTQIARR 114 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR G+FLLQ LNE MQP Q TARL V++LLSHC DLL ++TA QAL AIRDY Sbjct: 115 GPRTGTFLLQALNEQAMQPAAQATARLTVSALLSHCSDLLAGHLRTAPHRQALLNAIRDY 174 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ Y AL+R++VA+ F+I+PNYLS LFQ+ GFN YLNH RLE AKTLLK Y++ + Sbjct: 175 IDDHYMDALSRDAVARRFHITPNYLSQLFQRADGGGFNHYLNHVRLEQAKTLLKEYEMTI 234 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 K +AHACG+ DSNYFCRLFR+ TER+PSEYRRQYHSQ Sbjct: 235 KAIAHACGYDDSNYFCRLFRQRTERTPSEYRRQYHSQ 271 >UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFY1_TOLAT Length = 285 Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 112/248 (45%), Positives = 155/248 (62%), Gaps = 9/248 (3%) Query: 36 YQVDF---PRLEIVLEG--EFVDTGAGATLV----PGDVLYVPAGGWNFPQWQAPATTFS 86 ++ DF PRLE ++EG T ++ G VLY P + + S Sbjct: 34 HETDFEACPRLEFMVEGSANIKSTRESEKVITQLNSGSVLYTPVDIQFDFLFNEKSLLLS 93 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIV 146 + F KQQ+ ++ WDG+ L K V RRGPR+G+F+LQ+L E Q +++QTA ++ Sbjct: 94 MGFYKQQIILKLIAWDGEHLNVLEKTSVLRRGPRVGAFILQSLQEAMWQKEDKQTATYLI 153 Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 SLL LL + + T R ++LFE IR+Y+D+ + LTR+SVA+ F IS YLS LF Sbjct: 154 KSLLCSSLYLLQNPLTTQPRRKSLFEEIRNYVDDNFYKDLTRDSVAKEFLISSTYLSRLF 213 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 QK + FNEYLN+ RLE AK++LK +D+KVK+VA CGF DSNYFCRLF++ T+RSPSE Sbjct: 214 QKEADLRFNEYLNYIRLEKAKSMLKRHDVKVKDVARKCGFNDSNYFCRLFKEKTDRSPSE 273 Query: 267 YRRQYHSQ 274 YR QY S+ Sbjct: 274 YRAQYCSK 281 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 99/261 (37%), Positives = 154/261 (59%), Gaps = 15/261 (5%) Query: 21 QIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGAT-------LVPGDVLYVPAGGW 73 Q+ +A P P A+QV FPRLE VL G + + + L G L+VPA W Sbjct: 23 QLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDSQGDKIEQRLTTGQFLFVPANCW 82 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQ--YQNLAKQHVARRGPRIGSFLLQTLNE 131 N P WQ S+LFG++QLG S+V W +Q + ++ K +LQ L Sbjct: 83 NKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDVQKHSYPLSAKSPVHSMLQAL-- 140 Query: 132 MQMQPQEQQTAR---LIVASLLSHCRDLLGS-QIQTASRSQALFEAIRDYIDERYASALT 187 + +Q E QT R L + ++L+ ++LL Q + R+Q++F+ I Y+ E + A++ Sbjct: 141 IDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRAQSVFQRICIYVQENFHKAIS 200 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 RE+VA+ F ISPN+LS LF++ G + F +Y+ + R++ AK +L+ Y + ++E+AH CGF Sbjct: 201 RETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKFMLRRYPMHLEEIAHRCGFR 260 Query: 248 DSNYFCRLFRKNTERSPSEYR 268 D+NYFCR+F+K T R+P+EYR Sbjct: 261 DTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/277 (36%), Positives = 164/277 (59%), Gaps = 15/277 (5%) Query: 1 MYHDVS-YLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF---VDTGA 56 M+H+++ YL++ NG LS + S N P P AYQV+F RLE++L+GE+ VD Sbjct: 1 MHHNIAEYLIN--FNGKLSKVCL---SKNTP-PQGAYQVNFNRLELILDGEYDLIVDART 54 Query: 57 GAT---LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD-GKQYQNLAKQ 112 G L G+++Y+P+ W+ P W++ S+LF K Q+GFS V + G + ++ K Sbjct: 55 GEKKLLLQQGEMVYIPSNAWSKPTWESTCKILSILFSKHQIGFSFVHHEVGNGFVDVQKY 114 Query: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL-GSQIQTASRSQALF 171 + +L LN M + + A + +L+++C +LL G Q + SR + L+ Sbjct: 115 AMPLPTSMAVEHVLDALNSMSDESRSMVMAGHLANALVTYCNELLQGPQQEKVSRREKLY 174 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 ++ Y+ E + +TR SVA F +S ++S LF + G++ + +Y+ + RL+ AK +LK Sbjct: 175 RSMCIYVQENFHKNITRTSVASRFGVSSAHVSRLFNQEGSVRYADYVTYVRLDRAKFMLK 234 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 Y+ KV E+AH CGF D+NYFCR+F++ T ++PSEYR Sbjct: 235 KYNFKVDEIAHRCGFKDTNYFCRVFKQKTGKTPSEYR 271 >UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QGZ7_9ENTR Length = 285 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 89/263 (33%), Positives = 139/263 (52%), Gaps = 20/263 (7%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVP-------------GDVLYV 68 + A+ N P +AY + PR+E++++G + L+P G V Y+ Sbjct: 22 VLVANGNAQPPAMAYHLHVPRIELIVKGTL------SMLLPKGEDKIVKYLRPVGTVTYI 75 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 PA WN P W +P S++F KQ +GFS+ WDG Q++ + K ++ + LL+ Sbjct: 76 PANSWNSPLWGSPVICMSIVFWKQDVGFSISNWDGTQFKEVEKFNLENSSSSVRDRLLEL 135 Query: 129 LNEMQ-MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 + +T IV +LL+ + + A +L + I+ +ID Y + + Sbjct: 136 AESLAWTHNNSGETFAHIVYALLNDLLYQITDGMSNAKGPLSLLDEIKSHIDSHYQADIN 195 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 RESVA+ F ISP YLS LF + + FNEYL R+ +KTLL +LK+ EV+ CGF Sbjct: 196 RESVAETFNISPGYLSRLFSRESDVKFNEYLKLARISRSKTLLTSTNLKINEVSEKCGFT 255 Query: 248 DSNYFCRLFRKNTERSPSEYRRQ 270 D+NYFC++FR + +P EYRR+ Sbjct: 256 DTNYFCKVFRDINDCTPLEYRRK 278 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 162/278 (58%), Gaps = 13/278 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTG----- 55 M+ D L+S ++N S I+FA P+ +YQV+FPRLE+VL+GE+++ Sbjct: 24 MFDD---LISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDR 80 Query: 56 --AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV-QWDGK-QYQNLAK 111 + GD +++P+ WN P W + S+LFG++QLG S+V + G+ + ++ K Sbjct: 81 KVSKIVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEVNFYDIQK 140 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQAL 170 + R +L+ L+ + + ++ L++ +LL + + +L + + Q+ +R Q L Sbjct: 141 HSIQTRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQDL 200 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 ++ I YI E + +TRES+A F IS N+LS LF++ G + +Y+ R++ AK +L Sbjct: 201 YQGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFML 260 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 K Y+ K+ EVA CGF D NYFCR+F+ T R+P++YR Sbjct: 261 KKYNFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 144/270 (53%), Gaps = 8/270 (2%) Query: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDV 65 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 Query: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---HVARRGPRIG 122 L++PA N P P S++F LG S + A+Q +RG G Sbjct: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE--G 133 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDER 181 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + Sbjct: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 YA LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 147/271 (54%), Gaps = 10/271 (3%) Query: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 L S L+ P L +++FA+ +P + +D PRL+IVL GE+ + + LV G++ Sbjct: 16 LFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYGNQLEKSQHRLVEGEM 75 Query: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDG----KQYQNLAKQHVARRGPRI 121 L++PA N P + P S++F G S + + + H +RG Sbjct: 76 LFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPLRRIELPH-PQRGE-- 132 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAIRDYIDE 180 G +L L + PQEQ + +V SLL CR ++ + R++ L+ +I +++ + Sbjct: 133 GEAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAEFLYHSICNWVQD 192 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 YA L+RESVA F I+PN+LS LF + G + F +Y+ R+ A+ +L+ Y L V EV Sbjct: 193 NYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARMILQKYHLSVNEV 252 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A CG+ DS+YFCRLFR+ +P EYR ++ Sbjct: 253 AQRCGYEDSDYFCRLFRRQFGLTPGEYRARF 283 >UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NVM9_CHRVO Length = 272 Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAG---ATLVPGDVLYVP 69 ++ P +L+++ A + +P AYQV FPRLE+VL + + G A+L + L++P Sbjct: 9 LSWPSALQRLCHAPAGKHMPAGAYQVHFPRLELVLSNRYHYSHEGCENASLSAQEALFIP 68 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHV--ARRGPRIGSFLLQ 127 A W P W A +LF ++GFS+V+ + + K+ + A+RG G +L Sbjct: 69 AEHWTLPNWCANGEVLHILFDYARIGFSLVRSGPQGVISTHKESMVLAQRGSLNG--MLD 126 Query: 128 TLNEMQMQPQEQQTARLIVASLL-------SHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 L + + + RL +LL RD SQ Q LF AI YI E Sbjct: 127 VLAGLCRDGADPEVLRLQGQALLALLQSLYDEARD---SQWQQGGN---LFRAICLYISE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + LTRE VA F IS +LS LF++ +GF E+L+H RL+ AK LL+ L + V Sbjct: 181 HLYAPLTREDVALRFSISATHLSRLFRQHLGLGFCEFLSHARLDLAKALLRQGQLPLSRV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A CG+ D NYF R+F++ +P YRR++ Sbjct: 241 AARCGYADVNYFHRVFKQRFAMTPCAYRREF 271 >UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLX0_9BACT Length = 282 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 123/241 (51%), Gaps = 15/241 (6%) Query: 42 RLEIVLEG----EFVDTGAGATLVPG--DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLG 95 RL I L+G + G T+ P ++P WN P W+ P ++LF Sbjct: 41 RLAIPLDGCHRMKIPLNGKIETIYPKRYSATFMPKNSWNLPDWELPVKVVTLLFNDDGFI 100 Query: 96 FSVVQWDGK-QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQE--QQTARLIVASLLSH 152 + V G + L+++ + G + LN ++ P+ Q+ +V +LL + Sbjct: 101 CNYVNTQGGYDHSKLSQKSIYWSGLEGHT----VLNLLKASPKHDLQKPYIHLVNALLFY 156 Query: 153 CRDLLGSQIQTASRSQA--LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 C + +Q++ S S+A F+ I Y++E Y+ +RE VA F ++PNY+SHLF+ Sbjct: 157 CLNSSSNQLENKSSSKAENTFKNIYLYLEENYSLVNSREDVATNFKLTPNYISHLFKSQT 216 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + F+ +L R+ A LLK ++ + E+A CG+ +++YFCR+F+K +PS YR + Sbjct: 217 GMSFSHHLTTIRINQACYLLKKFNQNIDEIARVCGYHETSYFCRVFKKIKGHTPSAYRLK 276 Query: 271 Y 271 + Sbjct: 277 H 277 >UniRef50_B9MP59 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=B9MP59_ANATD Length = 502 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 90 GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASL 149 G+ QL F K Y + ++ RIG L + E I ++ Sbjct: 323 GRYQLDFL------KTYLSFVVVSISSYFSRIGLNLEDEIEWFSSLRLEFSNVEDIEKNM 376 Query: 150 LSHCRDLLGSQIQ-TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 L C +L Q S S + + YI E Y LT +SVAQ FY++P YL LF+K Sbjct: 377 LKFCEGILNKFRQWKTSLSNGIMSELEKYIKENYNKNLTLKSVAQKFYLNPVYLGQLFKK 436 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + FN YL R+E AK LL ++K+ E++ A G+ D++YF + F K +P+++R Sbjct: 437 HYGMYFNSYLQKIRVEEAKRLLMSTNMKIYEISQAVGYNDTDYFIQCFTKFCNMTPNQFR 496 Query: 269 RQYH 272 ++Y Sbjct: 497 KKYR 500 >UniRef50_C6CV61 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV61_PAESJ Length = 532 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 IVA+L + Q+ LFE+I Y+ E + ++RESVA+ Y++P Y+S+ Sbjct: 407 IVATLTDTALKI-ADQLSARKNGNKLFESILAYVHEHFRLDISRESVAREVYVTPGYISY 465 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LF++ F EYL+ R+E+A LLK L++ ++AH G+ D YF ++F+K+T +P Sbjct: 466 LFKQQMQTSFIEYLHRIRIEYASRLLKDPSLRISDIAHESGYQDEKYFFQVFKKHTGMTP 525 Query: 265 SEYR 268 ++YR Sbjct: 526 TQYR 529 >UniRef50_D1N143 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N143_9BACT Length = 277 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Query: 133 QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVA 192 + +P ++ R+ ++ LL L + R + A+ ++++ RYA +T A Sbjct: 135 EFRPALEKLVRVSLSGLLHELYTLRPELLSQPVRDARIL-AVLEFLNARYAERITIRQAA 193 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 + Y+SP+ LSHLF++T + F+EYL RL A LL G DL + E+A CGF D N+F Sbjct: 194 ELVYLSPSRLSHLFRQTCGMDFSEYLLALRLGVACELLAGTDLAIGEIAVRCGFGDQNHF 253 Query: 253 CRLFRKNTERSPSEYRR 269 +FRK T R+ SEYRR Sbjct: 254 SAIFRKRTGRTASEYRR 270 >UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD25_9FIRM Length = 519 Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 64/99 (64%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 R YIDE A ++ S+A++ YI+PNY S LF++ G NEY+ R+E AK+LL+ Sbjct: 420 RHYIDEHLAEDISVSSIAESLYITPNYFSRLFKRITGEGCNEYIVRKRIEKAKSLLETTS 479 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 +K ++A G+ D+NYF F+K+T +SP++YR + + Sbjct: 480 IKTGKIAMMVGYRDTNYFSLAFKKHTGKSPTKYREEMQN 518 >UniRef50_C6CWB0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWB0_PAESJ Length = 530 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 150 LSHCRDLLGSQIQ-TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 L CR+LL + + R Q++ E I I ERY LT E +A+ Y+SPNY+ +F++ Sbjct: 407 LRFCRELLKAAAERDLDRHQSVAEQIMKLIAERYHLPLTVEDIAKEVYLSPNYVRTIFKE 466 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +YL R+ HA LLK LKV+++AH + + +YFC +F+K+ +P+EYR Sbjct: 467 KTGETILDYLTRIRMNHAAELLKDRALKVRDIAHRVSYENVSYFCSVFQKHKGSTPNEYR 526 Query: 269 R 269 + Sbjct: 527 K 527 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 62/100 (62%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +DYID YA LT E VA+ ISP Y S LF++ I F +Y+ + R+E AK L D Sbjct: 414 KDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETD 473 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 +KE+ + G+ D NYF R+F+K T SPSEYR++ ++ Sbjct: 474 QSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2N9_9BACT Length = 354 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/269 (29%), Positives = 113/269 (42%), Gaps = 39/269 (14%) Query: 40 FPRLEIVLEGEFV------DTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 FPR VLEGE+ D A + G++ ++ WN + AP F+V F Sbjct: 76 FPRFIFVLEGEYRVIHDINDRSADRVVRTGELYWIRPNDWNLVRNDAPRVVFAVSFTPDH 135 Query: 94 LGF-----------SVVQWDGKQ-------YQNLAKQHVARRGPRIG-----SFLLQTLN 130 F S V D Y VA R IG + L +L Sbjct: 136 TRFLWYHHKREPENSNVCLDTDNAFHTELWYHTHVPVSVALRYA-IGLIDEATTLDASLG 194 Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ---------TASRSQALFEAIRDYIDER 181 ++ + Q+ +LL+ C L + Q T S S+ F+ I +I ER Sbjct: 195 KLGTDSERQELLHTTGEALLAWCLQELHADAQLAESARFSGTVSPSRRTFDEICAWITER 254 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 L R SVA F +S ++L+ LF+ GF E++ R A+ LL L +KEVA Sbjct: 255 LQHDLERHSVASIFRVSEDHLTRLFRTHAHCGFVEFVRAERFRLAERLLADSRLSIKEVA 314 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 ACGF S YF + FR+ +P+ +RRQ Sbjct: 315 AACGFSLSAYFIKRFRQQHGLTPAAWRRQ 343 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 67/111 (60%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 + RS++L E R Y+ E Y+ ++ + V++ +SP Y S +F++ F EYL + Sbjct: 420 KNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNI 479 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 R+ AK LL+ +L +KE+ G+ D NYF R+F+K+T +P EYR +Y+ Sbjct: 480 RIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRERYY 530 >UniRef50_A3GSD5 Transcriptional regulator (Fragment) n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GSD5_VIBCH Length = 188 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 10/183 (5%) Query: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV------DTGAGATLV 61 L+S ++N S I+FA P+ +YQV+FPRLE+VL GE++ D + Sbjct: 6 LISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLGGEYINEMESHDRKVTKIIA 65 Query: 62 P-GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV-QWDGK-QYQNLAKQHVARRG 118 GD +++PA WN P W + S+LFG++QLG S V + G+ + ++ K + R Sbjct: 66 KAGDAIFIPANCWNKPNWDTDCSVLSMLFGRRQLGLSFVSKRKGEANFYDIQKHSIQTRS 125 Query: 119 PRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDY 177 +L+ L+ + + ++ L++ +LL + + +L + Q +R Q L++ I Y Sbjct: 126 GFAIDNILEALSSLARENYKKPMDELLLQALLQYTQTMLNAPTEQPQNRVQDLYQGICIY 185 Query: 178 IDE 180 I E Sbjct: 186 IQE 188 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 27/228 (11%) Query: 60 LVPGDVLYVPA----GGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA 115 L PGD+ +P P W+A F + F + + S + G++ A H+ Sbjct: 62 LEPGDMTIIPPLEVHKALYEPSWEA--ERFGIYFSRDTVT-SFLSLCGRE----AFGHIF 114 Query: 116 RRGPR-IGSFLLQTLNEM--QMQPQEQQT---ARLIVASLLSHCRDLLGSQIQTASRS-- 167 + R I S + E+ QMQ +E+Q ++ + SLL +LG + Q A R Sbjct: 115 SQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLLHQILVVLG-RCQEARREGH 173 Query: 168 ------QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 +A+ A R Y+++ Y +T VA +SP Y S F+ + + F EYLN+ Sbjct: 174 ALEEAEEAMVRAAR-YMNQHYQEGVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYI 232 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R++ A +L+ DL V VA ACGF D NYF +FR+ T SP EYR+ Sbjct: 233 RVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5H4_9BACT Length = 285 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 7/219 (3%) Query: 62 PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---HVARRG 118 PG+V+ G W W SV+F ++ + + DG + H R Sbjct: 69 PGEVIIGRPGAWIDELWNHGHEMISVVFFEKYVRALYIGHDGLRPPQKGPDVFFHTVRPA 128 Query: 119 PRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAIRDY 177 + + T+ + + + ARL + +LL +LL + +T+ + L+ + DY Sbjct: 129 ---DAAMHATIQALLAAGSDSRAARLNLRALLEMVLELLYRERETSIPEEELLWNRVFDY 185 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 + + + ++RE +A I P LS L + + EYLN RLE+A LL+ L V Sbjct: 186 LQYTFCNDISREDIAAGAGIHPARLSRLVRSRTGLAVREYLNRMRLEYAVQLLRESRLPV 245 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 +E+A CGF +YF RLFR+ SP E+RR+ + T Sbjct: 246 EEIAVQCGFNYPSYFIRLFRRRYRISPGEFRRRKENGFT 284 >UniRef50_UPI0001C368F3 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368F3 Length = 538 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Query: 163 TASRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 T +R L I Y++E + S LT + +A+ Y++P+YLS +F++ + F +YL Sbjct: 423 TDARGNKLIHTILQYLNENLSKSTLTLKKIAEINYVNPSYLSRIFKEVTQMNFVDYLATL 482 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 R+E AK LL+ +L++ E+A + G D NYF +LF+K T +P++Y+ + H Q Sbjct: 483 RIEKAKRLLQTGNLRIYEIAESVGISDPNYFSKLFKKYTNMTPAQYKEEIHRQ 535 >UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXH5_9BACL Length = 524 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 3/136 (2%) Query: 149 LLSHCRD--LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 LL CR+ LL + ++ + + +F+ I+ Y+DE + S L +++A+ F+++P YL +F Sbjct: 386 LLKLCREASLLLAGLRRKNENNTIFQVIQ-YVDEEFRSKLKLQTLAKQFHMNPTYLGQVF 444 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 +K FN+YLN RLE AK LLK +K+ ++A G+ +++YF F+++ PS Sbjct: 445 KKETGKTFNDYLNEKRLEEAKRLLKRTSMKISDIALQVGYPNTDYFISKFKQSIGMLPSV 504 Query: 267 YRRQYHSQLTEKPTTP 282 Y+ ++ +K P Sbjct: 505 YKSEFQHDGPQKVKGP 520 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 62/109 (56%) Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ A L E +YI Y S + + VA I+PNY S LF++ FNEY+NH Sbjct: 403 LKAADNKDWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFKQKTGKSFNEYVNH 462 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R+E AKTLL+ K+ E+A GF + YF +FRK + +P++YR+ Sbjct: 463 MRVEEAKTLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQYRK 511 >UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=Opitutaceae RepID=B1ZXD9_OPITP Length = 430 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 10/140 (7%) Query: 146 VASLLSHCRDLLGSQIQTASR---SQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 +A+ L +LL IQ R S L AI +Y++E A LTRE VA+A +SP++ Sbjct: 296 LATWLCEMLELLIDAIQANRRHPNSVQLARAI-EYMEEHLAGELTREEVARAAGLSPSHF 354 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 SHL + F E L R++ A LL + ++ ++A +CGF D +YF R+FR+ T++ Sbjct: 355 SHLMRDKTGRSFTELLTRLRVDRACHLLARTETELAQIAQSCGFGDQSYFTRVFRRATQQ 414 Query: 263 SPSEYRRQYHSQLTEKPTTP 282 +P E+RR + PT P Sbjct: 415 TPGEFRR------AQTPTAP 428 >UniRef50_B8I505 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I505_CLOCE Length = 534 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 85/150 (56%), Gaps = 8/150 (5%) Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDER 181 G FLL + ++ + + ++ DL+ + ++S+++ + +++YID Sbjct: 390 GDFLLDIF-----KLEKYVDIEVTILGIVEKATDLITEALN--NKSKSIVDEVKNYIDRN 442 Query: 182 YA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Y+ ++LT + VA FYI+ +YLS +F+K I F+EYL R+++AK++LK D K ++ Sbjct: 443 YSDNSLTLKVVADKFYINSSYLSRIFKKGTGITFSEYLTKVRIDNAKSILKSQDYKAYQL 502 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A G D NYF + F+K S +EY+ Q Sbjct: 503 AEMIGIPDPNYFVKCFKKVAGISFAEYKLQ 532 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Query: 162 QTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 + +S + + + + +YI + Y+S +L+ + +A+A Y+SP YL LF+K E++N Sbjct: 325 RNSSEGEGIIDRVVEYIQKNYSSESLSVKEIARASYLSPAYLGQLFKKKMGYSLTEHINK 384 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 R+E AK LL+ + ++ VA GF + +YFC++F+K T SP+EYRR+ S L Sbjct: 385 VRIEQAKLLLRQTEQTIESVAIQTGFKERSYFCKVFKKITGLSPNEYRRKNFSPLV 440 >UniRef50_A4XMG0 Two component transcriptional regulator, AraC family n=2 Tax=Thermoanaerobacterales RepID=A4XMG0_CALS8 Length = 529 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + LI ASLLS + +I+ + +A +I++ Y +T ESVA+ Y++P Sbjct: 398 EKKELIKASLLSFLNATV-DKIEQIENKNLIVKAAISFIEKNYNKNITLESVAKEVYVTP 456 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 YLS LF++ I F +YL+ R++ A+ LLK +LK +VA+ GF D YF ++F+K Sbjct: 457 AYLSILFKRELKINFVDYLHKIRIQKAQELLKNQNLKTYQVANMVGFSDEKYFSQVFKKY 516 Query: 260 TERSPSEYR 268 T +PS++R Sbjct: 517 TGLTPSQFR 525 >UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D484_9CLOT Length = 419 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 74/135 (54%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 +A L + ++L A + + E + YID Y ++ + A++ ISP YLSH+ Sbjct: 281 IAKLRENHKNLPDLPADNADKIKDYVETAKQYIDSNYIRDISLMACAESVGISPYYLSHI 340 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ F EYL R++ AK L + L VK+++ CG++++ YFC++F++N ++ Sbjct: 341 FKEKTGSTFVEYLTAVRMDRAKELCRNQKLTVKDISDRCGYINTTYFCKVFKRNVGKTIG 400 Query: 266 EYRRQYHSQLTEKPT 280 YR + +E+ T Sbjct: 401 AYRMELLRTESERGT 415 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 + Q+L RDY+ + + LT + +A+ +SP Y+S LF++ + F+EY+ R+ Sbjct: 410 TTDEQSLMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRV 469 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EHAK LL +KE+ + G+ D NYF R+F+K T +SPS+YR+ Sbjct: 470 EHAKQLLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRK 515 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 61/98 (62%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 F+ + +YID+ + + +T + VA S +YLS LF+K I FN Y+ R++ AK +L Sbjct: 144 FQEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEIL 203 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++ + E+A + G+ + NYFC++F+K +PSEYR Sbjct: 204 INSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVE2_9BACL Length = 215 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 2/123 (1%) Query: 148 SLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 + LS L+ +++ S + + DYI+E Y LT S+++ F+ +P+YLS F Sbjct: 89 AFLSEVEPLVAARVPLPSDGN--MKLLLDYIEEHYGEPLTLSSLSRHFHFNPSYLSSYFS 146 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 GF+EYLN R+ AK LL+ L + E+ G+ D +YF ++F+K SP EY Sbjct: 147 AHNDEGFSEYLNRVRIAKAKELLRSDGLPISEIGSRVGYSDPSYFTKVFKKQMGLSPREY 206 Query: 268 RRQ 270 RRQ Sbjct: 207 RRQ 209 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 165 SRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 S+++ L + I E Y+ ++ S+A+ YI+PNYLS LF+ + F++YL R+ Sbjct: 257 SKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRI 316 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 E AK LLK +K+ EVA A G+ D +YF ++F+ T +P EYR + Sbjct: 317 EKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Query: 156 LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 +L S++ S S + E I +YI Y +T + +A+ Y+SP YLS+LF+K I F Sbjct: 165 ILDSEMIRIS-SLSSIEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFK 223 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EYL + RL+ +K L++ DL + E++ G D NYF RLF+K SP Y++ Sbjct: 224 EYLINIRLKKSKELIETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 56/95 (58%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI E Y ++ E VA I+P YLS LF + F+ +L R+ HAK LLKG D+ Sbjct: 423 NYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLLKGTDM 482 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 KV E+A G+ D YF R+F++ SP +YR+Q Sbjct: 483 KVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 S ++ + ++YI+ YA ALT ES A+ +SP Y S LF+ + F +++ R+ Sbjct: 419 SHAKDMLYKAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIR 478 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LK L +KE+ ++ G+ D NYF R+F+K+T SP+EYR++ Sbjct: 479 KAKHFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYRKE 524 >UniRef50_B8I3I7 Two component transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=B8I3I7_CLOCE Length = 544 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 67/109 (61%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 + ++R++ L ++DY+D Y+ +T S+++ F IS YLS LF F +YL + Sbjct: 432 KRSNRNEKLLSKVKDYVDRNYSENITLTSISKDFGISSGYLSVLFNDYIGQNFIDYLTNL 491 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+++AK LLK DLK+ E+A G+ D+ YF F+K+ +P++YR + Sbjct: 492 RIQNAKNLLKSTDLKIYEIADRVGYRDAYYFSTAFKKSVGINPTDYREK 540 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 11/180 (6%) Query: 96 FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT-LNEMQMQPQEQQTARLIVASL--LSH 152 S VQ KQ + + +Q V +IG +Q+ ++ M+ +E A V+S + H Sbjct: 248 ISFVQSLLKQLEKVLQQRV-----KIGIGTIQSGVDGMKRSYKEASIAVRYVSSFSRVMH 302 Query: 153 CRDL-LGSQIQ--TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 D+ L +++ T ++ E + ++ E Y +T E VA+ +++P Y S LF+K Sbjct: 303 VDDVPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKE 362 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 F +Y+ H R+E AK L++ L VKE + G+ D NYF R+F+K T +P+EYR+ Sbjct: 363 TGQTFIDYVTHLRIEKAKQLMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQ 422 >UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4T0_9BACT Length = 353 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 41/296 (13%) Query: 3 HDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE----FVDTGAGA 58 H ++ L+ ++ P S R S+ +D PR I L GE G + Sbjct: 61 HCIARLIDSVLRRPASGRVFL---SHEKARHCLTALDCPRFSICLWGEARYHIWQNGVRS 117 Query: 59 T--LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ--WDGK---------- 104 L GDV+Y AG P +A + V+ F V Q W Sbjct: 118 EVRLRRGDVIYASAGCMMEPAPEANYLSLGVVPHAHLTRFLVAQKRWSHANANANGPLPP 177 Query: 105 ------QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG 158 ++Q L H + G L + ++ + E + R + +LL +LL Sbjct: 178 PSPPVTRHQFLVTHHTQKTLDADGRHLCEAIDRCAGRNPEDRWLRALFRALLIRSHELLL 237 Query: 159 SQIQTAS----------RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 + + R QA + IRD++ E L RE+VA + PN++S LF + Sbjct: 238 ADSEPGREGGEEGRSHFRWQAACQFIRDHLHE----PLGRETVASFLQLHPNHISRLFAR 293 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 FN+Y+ R+ A+ LLK L + ++A ACGF D NYF R +RK R+P Sbjct: 294 FSKAPFNQYVMSERIRRARHLLKNPGLNLADIAAACGFSDPNYFSRCYRKVVGRAP 349 >UniRef50_C5DA17 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5DA17_GEOSW Length = 492 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 4/127 (3%) Query: 145 IVASLLSHCRDLL--GSQIQTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNY 201 IV +L LL + + +R+ + + IR YI+E + + LT E VA A SP Y Sbjct: 359 IVQEMLLFLYGLLDRAKEAEEQARADVIEKGIR-YIEEYFRNPDLTLEKVAAAVGRSPAY 417 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 SHL K I F + L TR++ AK LL +L +KE+A+ GF S+YF R+F++ T+ Sbjct: 418 YSHLLMKKYGISFRKLLTQTRIKEAKRLLAQTELSIKEIAYQTGFRTSHYFTRVFKEETK 477 Query: 262 RSPSEYR 268 R+P+EYR Sbjct: 478 RTPTEYR 484 >UniRef50_C6LAZ8 DNA-binding response regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAZ8_9FIRM Length = 531 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 63/104 (60%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L +R Y+D+ L+ S+A FYI+PNYLS L++K G NEY+ R+E A+ L Sbjct: 419 LIPKVRRYVDDHLEEDLSVSSIAARFYITPNYLSKLYKKVTGEGCNEYIVRRRIETAQKL 478 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 L+ +LK ++A G+ D+NYF F+K T SP+ +R ++ + Sbjct: 479 LESTNLKTGKIAAMVGYRDTNYFSVAFKKYTGFSPTVFRSRFRT 522 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Query: 176 DYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 DYI+E Y S L+ + VA+ +++P+YLS LF+K F Y+N +L+ A+ LL+ D Sbjct: 405 DYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVLLRNTD 464 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +K+ E+ GF DS YF +F+K+ + SPSE+R+ + Sbjct: 465 MKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYA1_9BACL Length = 509 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 2/124 (1%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 +V SL++ + +GS +Q A + + +YID YA L+ +++ ++I P YL Sbjct: 385 LVQSLVNLAEETVGSLLQDAK--NPVVHQVLNYIDSHYADELSLKTLGAQYHIHPVYLGQ 442 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LF K + F EY+N R+E AK LK +LKV E+A + G+ + YF + FRK SP Sbjct: 443 LFHKETGMSFAEYINKYRIEKAKQQLKNTNLKVHEIARSVGYWEIGYFYKQFRKYVGISP 502 Query: 265 SEYR 268 ++++ Sbjct: 503 TDFK 506 >UniRef50_C5EQZ1 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQZ1_9FIRM Length = 534 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 58/94 (61%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I + I++ Y + E +A+ F I+P YLS LF + I + Y ++EHAK LL+ Sbjct: 438 ILNIIEKEYKENILVEEMARRFNITPEYLSTLFVRELGIKYTAYCTQVKIEHAKKLLRNS 497 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 ++K+ EVA G++D YFC++F+K T +SP EY Sbjct: 498 NMKIYEVAEQSGYMDVKYFCKVFKKYTGKSPKEY 531 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 DYI E YA +L +A+ F+ +P+YLS F GF +YL+ RLE A LL+ + Sbjct: 425 DYIHEHYAESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKASELLRAGEA 484 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + E++ G+ D +YFC++F+K+T SPS YR+Q Sbjct: 485 SISEISGMVGYSDHSYFCKVFKKHTGLSPSRYRQQ 519 >UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z3_9FIRM Length = 420 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 TA + Q + + +++YI + LT VA F SPNYLS LF K G GF EY+ TR Sbjct: 313 TAGKMQVVAQ-VQEYIQSHLSERLTLADVAAVFNFSPNYLSQLFGKYGDSGFVEYITETR 371 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + AK +L+ DLKV E+A G+ + YF ++F+K T SP EY++ Sbjct: 372 IAAAKEMLEQGDLKVYEIAEKLGYESAFYFSKVFKKVTGLSPREYQQ 418 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 58/104 (55%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S + + I+ YI E YA + ++A Y+SP YLS LF++ + YL + R+EHA Sbjct: 402 SSRIVQEIKRYIQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHA 461 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 K L +DLK+ EVA G+ F R+F+K +P EYR Q Sbjct: 462 KKYLMQFDLKIYEVAELTGYASPKQFIRVFKKEVGVTPGEYRNQ 505 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 63/111 (56%) Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ A + L E +R YI++ YA AL+ +AQ F+ S +Y++H F+ T +YL Sbjct: 164 VRAAGQENMLMERVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKHTTNYAPLQYLRR 223 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 R+ A+TLL DL + EVA GF D NYF R+FR+ P +RR + Sbjct: 224 WRIGKAQTLLIDTDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFRRTW 274 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 17/265 (6%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN 74 + L + Y+ + +L Y + + ++ EGE G VPG ++++PA Sbjct: 19 VHLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDGQDYRPVPGQLVHMPAHVL- 77 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEM-Q 133 Q+ + + K F+ + +Q L + P L + E+ + Sbjct: 78 ----QSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELVE 133 Query: 134 MQPQEQQTARL--------IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + AR+ I+A LSH L + L + I +I+ + A Sbjct: 134 LYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIERL-KQIEAFIEANLSEA 192 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 LT E +A+ ++ PNYL F K A+ +YLN R++ AK+LL DL +KE+A G Sbjct: 193 LTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVG 252 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ 270 F D+N+F + FRK SP+EYR + Sbjct: 253 FPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 63/106 (59%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 S++ L + YI+E Y + E++A +++P+Y S +F+K + F+ YLN R+E Sbjct: 306 SKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIE 365 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +K LLK D + E+A GF D +YF ++F+ T+ +P +YR+ Sbjct: 366 QSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQN 411 >UniRef50_D0KBE4 Two component transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=D0KBE4_PECWW Length = 350 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 +I++ S LT + +A ++SP YLS F+K+ GF+ Y+ ++ AK+LL+ DLK Sbjct: 251 HIEKNILSNLTLDDIAAKSFVSPCYLSRAFKKSMGTGFSSYITSRKISMAKSLLQFSDLK 310 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 V +A + D+NYFCR+F+K SPS+YRR Sbjct: 311 VNTIALELSWQDANYFCRIFKKEAGISPSDYRR 343 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 58/98 (59%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +DYIDE Y LT E VA+ ISP Y S LF+ + F +Y+ R+ AK + + Sbjct: 415 KDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPN 474 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +KE+ G+ D NYF R+F+K+T SP+EYR++ H Sbjct: 475 KSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKLH 512 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 66/100 (66%) Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 +A+ Y+++ Y ALT VA+AF ISP+YLS LF++T F++YLN R++ A+ LL+ Sbjct: 185 QAVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLR 244 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 D + ++A GF + ++F ++F++ + SP YR+QY Sbjct: 245 ESDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQY 284 >UniRef50_C6IXH7 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXH7_9BACL Length = 514 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 2/123 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + +L C D G + A RSQ + + I YI E Y LT + +A+ FY+ P YL L Sbjct: 391 IQALGIECID--GLLMDKAQRSQGVIQDINAYIREHYREPLTIKKLAEVFYLHPVYLGQL 448 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 QK + FNE +++ R+E A LL+ L EVA G+ + F + F K + SP+ Sbjct: 449 LQKKNGVHFNEMIHNYRIEEAVRLLRDGSLNNGEVAERVGYANYGQFLKQFEKRLQMSPN 508 Query: 266 EYR 268 EYR Sbjct: 509 EYR 511 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 62/102 (60%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI + YA +T VA+ F+ + +YLS F GF+EYLN RLE A LL +L Sbjct: 421 EYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELLLTTEL 480 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 + E++ + G+ D +YF ++F+K T SPS++RRQ ++ E Sbjct: 481 TISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQNAREIRE 522 >UniRef50_B8HZZ5 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8HZZ5_CLOCE Length = 519 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 60/99 (60%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + EA +I++R LT ++A+ F+++ NY S LF+K G NEY+ R+E AK L Sbjct: 414 IIEAATVFINKRLTEDLTVFTLAEQFHVARNYFSRLFKKEMGEGCNEYITRKRIEKAKHL 473 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L LK EVA G+ D+NYF F+KNT SP+E+R Sbjct: 474 LTVSRLKTYEVAEQVGYNDTNYFSLAFKKNTGMSPTEFR 512 >UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K9_9BACL Length = 403 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 58/100 (58%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 E YI E Y L+ E VA +++P Y S LF++ +G+ EY+ RLE AK LL Sbjct: 289 IEVALQYIKEHYNEELSLEKVASVVFLNPAYFSQLFKQKVGLGYKEYVTSLRLEQAKQLL 348 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 LK+ E+A G+ D +F ++FRK + +P+EYR+Q Sbjct: 349 LNPKLKIAEIAEYLGYQDIRHFAQMFRKKYQVTPNEYRQQ 388 >UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria RepID=C9A6S2_ENTCA Length = 507 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 2/125 (1%) Query: 147 ASLLSHCRDLLGSQIQTAS--RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 + LL D + Q+ T S L AI+ +I + Y +L+ +A+ F+ S YLS Sbjct: 379 SDLLLATIDDIRQQLTTLSPLDEDDLLVAIQRFIQDNYTKSLSLSELAETFHFSYTYLSA 438 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 + F+EY+ TRL+ AK LL DL + E++ A G+ D +YF R+F+K + +P Sbjct: 439 FLSAKLKMSFSEYVKKTRLDKAKELLTQSDLNLSEISEAVGYSDISYFSRIFKKECQVTP 498 Query: 265 SEYRR 269 S+YRR Sbjct: 499 SKYRR 503 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 1/131 (0%) Query: 138 EQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 +QQ+ + L+ C+D + A+ +A R YI+ +Y LT +++A + Sbjct: 152 QQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAAR-YINLQYREHLTLDAMAAMSNM 210 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 SP Y S F+ + F EY+N+ R++ A LL+ D V +A ACGF D NYF +F+ Sbjct: 211 SPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFK 270 Query: 258 KNTERSPSEYR 268 K T SP EYR Sbjct: 271 KLTGLSPREYR 281 >UniRef50_C6D659 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D659_PAESJ Length = 395 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 2/117 (1%) Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF-QKTGAIGFNEYLNHTR 222 AS S E YI Y + L+ E VA Y++P Y S LF QKTG+ GF EY+ R Sbjct: 279 ASGSDQSIEVALQYIRTHYHADLSLEKVAAIVYLNPVYFSQLFKQKTGS-GFKEYVIGLR 337 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKP 279 LE AK +L LK+ +VA G+ D +F +LFRK +PSE+R+++ EKP Sbjct: 338 LEQAKQMLLNPKLKLADVAERIGYQDMRHFSQLFRKKYGETPSEFRQRHRMDGIEKP 394 >UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P7_RUMHA Length = 549 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 30/235 (12%) Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNL-------------AKQHV 114 V A W + A TF + F K+ L ++VQ D ++ ++ A++ V Sbjct: 316 VEAHFWE--ERHARHDTFDISFLKKDLRQALVQQDKEKVNSVFEELSALFTEFHPAREQV 373 Query: 115 ARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLL------SHCRDLL--GSQI----- 161 + F L + E + +E +++ LL +H R LL GS + Sbjct: 374 VNACANLYYFFLSYVEEDALIKEEMPYPSVVMEILLECFTLKAHTRWLLKFGSWVGNTME 433 Query: 162 --QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 S++ + EA ++Y+ E Y LT ++A IS YLS +F+K N+Y+N Sbjct: 434 NFHRGSKTDKIVEAAKEYVRENYGEKLTLAAIASKIGISQGYLSSVFKKQTGGNLNDYIN 493 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 ++E AK LL+ ++ + E++ GF + YF ++F+K T +PSEY +Q Sbjct: 494 QMKIEKAKELLEKHEYMMYEISDMLGFENPYYFSKVFKKLTGITPSEYEMHRAAQ 548 >UniRef50_C0D1T3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T3_9CLOT Length = 361 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 5/118 (4%) Query: 153 CRDLLGSQIQTASRS-QALFEAIRDYIDERY-ASALTRESVAQAFYISPNYLSHLFQKTG 210 C L+G +T +RS AL ++ + ID Y S T +++A+ +SPNYLS F++ Sbjct: 243 CVRLIG---ETRNRSCSALIKSALEEIDRNYFRSEFTLQTLAETLMVSPNYLSARFKEET 299 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 GF +LN R+E AK LL K+ EVA CG D YF RLF++ +P EYR Sbjct: 300 GTGFVRFLNEKRMERAKGLLADVSRKIYEVACQCGIEDVRYFTRLFKEYAGMTPKEYR 357 >UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4G3_9CLOT Length = 456 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 13/167 (7%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 K + + + H R G I +L P+ ++ L+ A+ S Sbjct: 302 KSLEPVRQSHPGRAG-NISRYLAGAFGLKDGSPEGLKSGLLMAAATFS------------ 348 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 AS +E I YID YA L+ +A + +SPNY S LF+K F YL R+ Sbjct: 349 ASSKDFQYEEITAYIDRHYAEDLSLTGLAGMYGLSPNYFSTLFKKKAGCNFIHYLTSLRI 408 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +K LL +L ++E+A G+ +++F R F+K E +PSEYRR+ Sbjct: 409 AESKRLLLETNLTIREIAERVGYYSASFFIRSFKKAEEITPSEYRRK 455 >UniRef50_A5ZA57 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZA57_9FIRM Length = 516 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 2/108 (1%) Query: 162 QTASRSQALFEAIRDYIDER-YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ R + +A+ DY++ Y L+ + VA YI+ +YLS F+KT + F EY++ Sbjct: 409 RSCKRKNVIKDAL-DYVNRNLYNPELSLKKVASDLYINDSYLSREFKKTYGVSFIEYISQ 467 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 R+E +K LLK +LKV EVA GF DS+YFC F+K T ++ EYR Sbjct: 468 KRIEASKKLLKETELKVYEVAEKIGFKDSHYFCICFKKQTGQTVKEYR 515 >UniRef50_UPI0001B9ECC0 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECC0 Length = 510 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 12/131 (9%) Query: 152 HCRDLLGSQI------------QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 H DL+G + + A SQ + + I DYI + Y LT + +A+ FY+ P Sbjct: 378 HLNDLMGELLRFGEECIELLLKEQARHSQGIIQEINDYIRQHYRENLTIKRLAELFYLHP 437 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 YL L + IGFNE +++ R+E A LLK LK E+A G+ N F + F K Sbjct: 438 VYLGQLLMRKNGIGFNELIHNLRIEEAAALLKQNKLKNSEIAERVGYTHYNQFLKHFEKR 497 Query: 260 TERSPSEYRRQ 270 +P+E++++ Sbjct: 498 WGMAPNEFKKR 508 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 SRS L A+ ++++R+ ++ E A+ +SP Y S LF+ F++YL R+E Sbjct: 415 SRSHVLQRALL-FVNQRFKEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIE 473 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK L+ G L +KE+ + G+ D NYF R+F+K+ +PSEYR+Q Sbjct: 474 EAKRLIAGRSLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQ 519 >UniRef50_UPI0001C363ED two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C363ED Length = 487 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 5/115 (4%) Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASALTR-ESVAQAFYISPNYLSHLFQKTGAIG 213 DL Q +T L +IR+Y+D Y S L E+ A+ F +P Y+S +F+K Sbjct: 373 DLSAGQKKTG----LLVTSIREYLDREYCSNLVSLEATAEHFRKNPAYISKVFKKETGFN 428 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 F++Y+ R+ H+K LL+ LK+ E+A G+ D++ F ++F+K+ SP+EYR Sbjct: 429 FSDYITQKRMAHSKLLLRDMSLKIYEIAEMTGYADASNFIKVFKKHCGMSPNEYR 483 >UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY2_9CLOT Length = 252 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 12/161 (7%) Query: 115 ARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD------LLGSQIQTASRSQ 168 A++ ++G+F + ++P + +++ L H + +LGS S+ Sbjct: 92 AKQAVKLGAF------DYLLKPIPYEELEFVISQALEHSKKSHYQEQVLGSLYPADSQEP 145 Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 + +++ + + + LTRE +A+ +++P+YLSHLF+K + +EY+ RL AK Sbjct: 146 GVVHRVKEIVSQFISHDLTREQIAELVHLAPDYLSHLFKKETGVTLSEYIASQRLTMAKY 205 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 LL L V +A G+ +YF R+F+K +P EYRR Sbjct: 206 LLAQTSLPVSSIADKVGYSYVSYFNRVFKKAYGMTPVEYRR 246 >UniRef50_C4IBC7 Response regulator receiver protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC7_CLOBU Length = 513 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIG 213 D + + +S+ + +I +YI + Y++ L + +++ Y++P Y+ +F+ + Sbjct: 392 DDIALMLNDSSKKNSTVPSILEYIHKNYSNTNLCLDDISKNTYLTPTYICVIFKDQMSKT 451 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 N+Y+ R+E AK LK ++K+ ++A G+ D NYF ++FRK T +PSEYRR + S Sbjct: 452 VNKYITEYRIEKAKAFLKDSNIKMSDIAGKVGYNDPNYFSKIFRKETSYTPSEYRRYFTS 511 Query: 274 QL 275 ++ Sbjct: 512 EI 513 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 8/157 (5%) Query: 130 NEMQMQPQEQQTARLIVASLLSHCRD--------LLGSQIQTASRSQALFEAIRDYIDER 181 +E+ M+P Q+ ++ ++ L G + + + + ++ +YI+E Sbjct: 101 DEILMKPSHQEDVIALIRRYMTFNEKENDKFDSMLDGITAKNSIQDGKVIQSALNYIEEN 160 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y + +T E VA+ +ISP YLS LF+K + F Y+ +++ AK LL+ DL V +A Sbjct: 161 YQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKELLENTDLPVIHIA 220 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 + + NYF ++F+K +PSEYR++ L++K Sbjct: 221 LELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKK 257 >UniRef50_B8I4I1 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I4I1_CLOCE Length = 525 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 +++YI + Y + + VA+ FY++ YL LF+K + FN+YLN+ R+E AK LL+ Sbjct: 426 VKNYIKQNYCKDIKLKEVARHFYMNSVYLGQLFKKVSGVQFNDYLNNVRVEEAKKLLQRT 485 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 D+KV E++ A G+ D YF F+ T PS ++ Sbjct: 486 DMKVSEISSAVGYNDPKYFLSKFKAITSLPPSAFK 520 >UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35CCD Length = 287 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Query: 115 ARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 +R P + S LL M+ P + + +LL S++ I Sbjct: 125 GKRVPLLFSQLLDI--SMRRYPASEYLLHYSLTALLLELAGEFSSRLLAPKEDPLHIYRI 182 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +D+I + A+T +A+ F+ +P+YLS ++K +Y+N R+E AK LL D Sbjct: 183 QDWIRRNFQQAITVAQIAEIFHYNPDYLSSSYKKLTGTTLTQYINSVRIESAKNLLTSTD 242 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +KE+A CGF D YF ++F++ + +PSE++ Sbjct: 243 FTLKEIAFYCGFFDEKYFFKVFKQYEDMTPSEFK 276 >UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J0_9CLOT Length = 544 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 64/106 (60%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 S + L I Y+DE Y+ ++ ++A F+I+P+YLS LF+K + F +Y+ R++ Sbjct: 430 SSGKTLITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKKEMNMKFIDYITDVRIK 489 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A LL+ L V EVA A G+ D+ YF +F K+ ++PS+YR + Sbjct: 490 KALVLLETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQYRME 535 >UniRef50_C6CTB8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTB8_PAESJ Length = 530 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 59/99 (59%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + ++++ Y+ + Y L+ + V+ ++I PNY S F++ I +N+Y+ R+E +K L Sbjct: 431 IIDSVQQYVRQHYNEELSLQWVSDKYFIHPNYFSKRFKQIVGISYNDYVTRVRIERSKEL 490 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 LK LK+ ++ G+ D YFC +F+K T SPS YR Sbjct: 491 LKTTTLKIARISQLVGYEDQGYFCSVFKKVTGVSPSAYR 529 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%) Query: 120 RIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA-LFEAIRDYI 178 R+ F L ++ M+ Q + L S L DL A R++ + E + YI Sbjct: 380 RVFQFCFSHLQKL-MRTQNYRGITLWATSFLEEISDLFAG----AKRNENNIVERVVKYI 434 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 +E + + + ++Q Y++P Y S LF+K + EYL R+E AK L L + Sbjct: 435 NENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEAAKKYLANPSLTIS 494 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 E+A G+ D+NYF ++F+K SPSE+R+ Sbjct: 495 EIARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_Q9KB26 BH2109 protein n=1 Tax=Bacillus halodurans RepID=Q9KB26_BACHD Length = 525 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 ++ YI+ Y ++ +S+A FY++P Y+ LF+KT + F EYL R+ AK LL+ Sbjct: 426 VKTYIENHYHENISLKSIASLFYMNPVYMGQLFKKTFGVYFKEYLLKLRMNEAKKLLRQT 485 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D++V EVA GF ++YF F K + +P+EYR + Sbjct: 486 DMRVYEVAERVGFGSTDYFVTQFEKINKMTPTEYRNK 522 >UniRef50_A8RP72 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RP72_9CLOT Length = 537 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 3/126 (2%) Query: 146 VASLLSHCRDLLGSQIQ--TASRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYL 202 + +S D QI+ ++ L I Y++E S L+ +++ YI+ +YL Sbjct: 405 IEKYISQFTDFTVCQIEEYMNKKNTMLVHRIVQYMNEHMDDSTLSLAKISKINYINNSYL 464 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S F+ I F +YL R+E AK LLKG DL++ EVA + G D NYF + F+K+T+ Sbjct: 465 SRTFKCVMGINFMDYLVSIRIEAAKKLLKGTDLRIYEVARSVGIEDPNYFSKFFKKHTQE 524 Query: 263 SPSEYR 268 +P++YR Sbjct: 525 TPAQYR 530 >UniRef50_B8I947 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I947_CLOCE Length = 539 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 2/125 (1%) Query: 144 LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 L++ L L+ S +T S + + +R I+ER+ ++ ++A+ Y++P YL Sbjct: 408 LLIQKLYFEVATLMSSMSKTYSHT--IINQVRKTIEERFKEQISISTLARDVYLTPTYLC 465 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 LF++ N+YL TRLE AK LL +K+ +V + G++ +YF RLF+K T S Sbjct: 466 VLFKQVTGTTINDYLTLTRLEKAKKLLSDPYIKLYDVCYEVGYLSPSYFSRLFKKYTGIS 525 Query: 264 PSEYR 268 PSEYR Sbjct: 526 PSEYR 530 >UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQC9_CLOCL Length = 275 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK-TLLKG 232 + DYID+ Y +T + +++ ++P YL +F+KT I EY+N+ R++++K +L Sbjct: 175 VLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKKTTGIRVFEYINNIRIKNSKEMILSK 234 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 ++ +KE+A GF D +YFC +F+K + +P+E+R+ Y Sbjct: 235 KNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEFRKLY 273 >UniRef50_UPI0001787D2D two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D2D Length = 535 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 64/106 (60%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 ++++ + + Y+ E Y L+ E VA+ F+ SP Y S F+ ++ F EYL R++ Sbjct: 427 NKNERIIAMCKAYLAEHYMEDLSLELVAKRFFFSPAYFSSFFRSHTSMTFTEYLLKLRMD 486 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A +L+G + K+ E+A + GF D+ YF R+F++ T SP E+R++ Sbjct: 487 KAMQMLEGGNRKISEIALSVGFRDAGYFTRIFKRETGLSPEEFRKK 532 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 10/218 (4%) Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ-WDGKQ-YQNLAKQHVARRGPR 120 GD++ VP+G + + ++ + +Q GK+ +N K V + Sbjct: 57 GDLVIVPSGCLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEK 116 Query: 121 IGSFLLQTLNEMQMQ---PQEQQTARLIVASL-----LSHCRDLLGSQIQTASRSQALFE 172 +++ L+++ + P E A + V + + C++ + I+ + + Sbjct: 117 RRDYVVALLDKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQ 176 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 + YI E YA L+ E VA F +S +YLS F+ GF EY+ + R+++A LL Sbjct: 177 EVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLE 236 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + + ++A CGF DSNYF FRK SP +YR+ Sbjct: 237 TNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF55_CLOCL Length = 292 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I ++I Y +T +A F + +YLS LF+KT ++N TR++ +K+L+ Y Sbjct: 188 IMEWIKANYYKPITISDIAYEFGYNADYLSSLFRKTSGSTLINFINKTRIDISKSLITNY 247 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 D+ +KE A++CGF D YF + F+K +PS+Y++ + ++ Sbjct: 248 DISIKEAAYSCGFTDEKYFLKTFKKFEAMTPSQYKKAFTRKM 289 >UniRef50_UPI000178A190 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A190 Length = 540 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%) Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSH 152 QL +S ++ GK+ Q H G LQ+LN ++ E+ A L+ + H Sbjct: 367 QLVYSYLK--GKEIQ----AHKLYTGKTNDQLFLQSLN--SIEDMEKYMAYLVRTAAEYH 418 Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 A S + E I+ YI Y LTR ++A+ +++P+YL+ +F+K + Sbjct: 419 A---------YAGHSHTVVEEIKHYIGCHYGEELTRTTLAEIVFLNPDYLARVFKKETGV 469 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 Y+ R+ AK LL+ L V ++A G+ + +YF +LF+++T +PS+YRR Sbjct: 470 SLGTYIIQARIRAAKHLLESTPLSVYQIAAKVGYANYSYFSKLFKQDTGWAPSDYRR 526 >UniRef50_C9XJN0 AraC-family transcriptional regulator n=8 Tax=Clostridium RepID=C9XJN0_CLODC Length = 551 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 58/101 (57%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L E I +YI + Y + S++ F+ISPNYLS +F + + EY+N R+E +K Sbjct: 445 LIENINEYIKKYYKENINLNSISDVFFISPNYLSSIFNERNKVSITEYINLLRIEESKKY 504 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 L + + ++ GF +S+YF ++F+K +P+EYR+ Sbjct: 505 LLDRSMSISDICKKVGFNNSSYFSQIFKKFNSITPNEYRKN 545 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 62/105 (59%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S + E I+ YI + YA LT +A FYISP YLS LF+K+ + EY+N R++ A Sbjct: 214 SNHIVEQIQAYIAQHYAEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAA 273 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + L++ + VA GF+ + +F R+F+ T SP +YR+QY Sbjct: 274 QNLIEKSGESISSVAGQTGFMTTAHFRRVFKDATGLSPQQYRQQY 318 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%) Query: 160 QIQTASRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 Q S+ +L + + +YI Y+ + ++ +++ F++SP+YLS LF+K ++++ Sbjct: 425 QKHNQSKMGSLIKKVIEYIKANYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFI 484 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 N R+E AK LL DLK EVA G D +YF R+F++ T SPSEY+ Sbjct: 485 NEYRIEKAKELLATTDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSEYKE 535 >UniRef50_C6CXK7 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CXK7_PAESJ Length = 481 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 20/215 (9%) Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGS 123 D +Y G F +A F Q LG S V + L Q V G I + Sbjct: 276 DEIYRIIQGNRFDDMEAYINGLQAYFKDQHLGMSEVVY-------LWNQAV---GILINA 325 Query: 124 FLLQTLNEMQMQ---PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ------ALFEAI 174 + + L +M+M+ E + SL S D+L S Q SRS + F + Sbjct: 326 YA-EELKDMEMEFLNYSEIKERFEHFESLCSFLHDVLASITQGNSRSLQEGDILSCFNRM 384 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YID Y L + ++ FYI+ Y LF+K F+EY++ R++ A+ LLK D Sbjct: 385 VAYIDSHYEQKLYLKDLSAQFYINQVYCCQLFKKNLGKTFSEYVSELRIKKARELLKKTD 444 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L ++E+A G+V+ YF ++F+K+ +PS++R+ Sbjct: 445 LSIEEIAIQTGYVEYYYFNKVFKKHCGITPSKFRK 479 >UniRef50_UPI0001692E78 DNA-binding response regulator, AraC family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E78 Length = 520 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 8/127 (6%) Query: 153 CRDLLGSQIQT-----ASRSQALFEAIRDYID---ERYASALTRESVAQAFYISPNYLSH 204 RD + S +Q A Q + A+R +D + Y+ ++ ++++ + + PNYL Sbjct: 391 MRDFVDSILQEVIDHLAEEEQEVSPAVRQMLDRVQQSYSEEISLKTLSYSMDMHPNYLGQ 450 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LFQK + F+EY+N R+E AK LL +LK E+A G+ D YF R+F+K SP Sbjct: 451 LFQKEMEMTFSEYVNTFRIEKAKHLLLQTELKTNEIAARVGYTDPTYFYRIFKKYVGVSP 510 Query: 265 SEYRRQY 271 +E R+ Y Sbjct: 511 TELRKMY 517 >UniRef50_C7GHF1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF1_9FIRM Length = 517 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 +++ S I +SR +++ + I YI+ YAS +T E++A F + +YL +F+K F Sbjct: 399 EMIMSSIGNSSR-ESVLDDILHYINHNYASNITLENIAPLFGYNSSYLGKIFRKKMGENF 457 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 N Y++H R++H+ LL +LKV +A G+ + +YF F+K +SP+EYR+++ ++ Sbjct: 458 NSYVDHVRIKHSMELLCSSELKVYAIAEKVGYRNVDYFHIKFKKYVGKSPAEYRKEHKNE 517 >UniRef50_A9QDR4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=A9QDR4_PAESJ Length = 522 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 64/105 (60%) Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 +S+ E I+ YI+ Y ++ +S+A FY++ YL LF+KT I FN++L R+ Sbjct: 413 QSKGGIERIKKYIEANYTENISLKSIAGKFYMNSVYLGQLFRKTYGIYFNDFLLQIRIGE 472 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LL+ DL++ E+A GF +++YF F K + +P++YR + Sbjct: 473 AKKLLRQTDLRMYEIAEKVGFQNADYFVTQFEKLEKVTPTDYRNK 517 >UniRef50_C0D5F5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5F5_9CLOT Length = 540 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 ++ YI+ L VA F +SPNYLS LF+KT IGF+EY+ ++ AKTLL Sbjct: 436 VQKYINSHIEDRLPLNEVAAVFGLSPNYLSALFKKTCNIGFSEYITQKKVARAKTLLLEQ 495 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 D+K+ EVA GF + YF ++F+K SP EY Sbjct: 496 DMKIYEVADQLGFESAFYFSKVFKKVEGISPREY 529 >UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A1_9CLOT Length = 536 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 61/98 (62%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 R +I E Y LT E+V++ +P Y S +F+K F++YL R+E+AK +L + Sbjct: 439 RQFIGENYYLPLTLETVSREIGFNPTYFSGMFKKETGKNFSDYLKEIRIENAKNMLLNTE 498 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +V++++ A G+ D YF RLF+K T +P+E+RR Y+ Sbjct: 499 QQVEDISFAVGYSDIKYFSRLFKKQTGVTPTEFRRLYN 536 >UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2Y7_9BACL Length = 118 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 9/123 (7%) Query: 148 SLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 +LLS L G +I EA+R Y+++ YA + + +A+ F+I PNY S F+ Sbjct: 1 ALLSKHSSLEGKEI---------MEAVRLYLEQHYAEPIQLQMIAERFFIHPNYFSKRFK 51 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + F +YLN R++ A LL +LK++E++ GF D+ YF +FRK +P +Y Sbjct: 52 EKYGESFVDYLNSIRMKEAAALLGETNLKIREISERVGFEDAAYFSSVFRKWYGETPKQY 111 Query: 268 RRQ 270 R + Sbjct: 112 RER 114 >UniRef50_C6J5N6 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5N6_9BACL Length = 540 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 C ++L S+ Q S + + ++DY+ S L+ VA F SPNYLSHLF KT I Sbjct: 417 CCEILSSRKQ--SYKEQIVRNVQDYVKRNLNSKLSLNQVADVFNFSPNYLSHLFSKTAKI 474 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 F EY+ T++ AK ++ + ++ E++ G+ + YF ++F+K SP E+ ++ + Sbjct: 475 NFVEYVTETKIAAAKEMMVRGEGRIYEISQKLGYESAFYFSKVFKKVEGISPREFMQRLN 534 Query: 273 SQL 275 S L Sbjct: 535 SSL 537 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 3/126 (2%) Query: 148 SLLSHCRDLLGSQIQTAS---RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 SL CR+++ Q S L + I YI Y S +T + +A +IS Y+S Sbjct: 389 SLFQVCREMIDETNQVISGRLEKHDLVDQISRYISANYQSNITLQDIADQIHISSAYVSR 448 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LF+ I E +N R++ AK LL + KV E+A GF D+ YF +F K SP Sbjct: 449 LFRNKTGITITEAINRARIDQAKLLLGNPEYKVYEIAQMVGFEDAAYFTSVFTKYVGCSP 508 Query: 265 SEYRRQ 270 SEYR Q Sbjct: 509 SEYRSQ 514 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 162 QTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 QTAS+ + E R +I E YA ++ +VA ISP+Y S +F + + F EYL Sbjct: 436 QTASKYSQVLEEARAFIRENYAKEEISLNTVAARVNISPSYFSSIFSQEMGVTFVEYLTG 495 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 R+E AK LL ++K E+ + G+ DS+YF LF+K +P EYR Sbjct: 496 VRMERAKELLMCSNMKTTEIGYEVGYKDSHYFGYLFKKTVGCTPKEYR 543 >UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BC36_9BACI Length = 515 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 3/130 (2%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 ++A + +LL I +++ + I +Y+ E Y +T A+ F+ +P+YLS Sbjct: 389 VLARFIKEVDELL---IPADNQNGITIKKIIEYMKEHYTEPITLTEAARHFHFNPSYLSS 445 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 F F E LN R+E A LL + + E++ GF D +YFCR+F+K T SP Sbjct: 446 YFSAHNEGSFIEQLNKIRIEEASKLLLEGEATISEISGLVGFSDHSYFCRVFKKRTGLSP 505 Query: 265 SEYRRQYHSQ 274 S+Y+R+Y ++ Sbjct: 506 SQYKRKYFTR 515 >UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D691_9CLOT Length = 253 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Query: 115 ARRGPRIG--SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 R+ ++G +LL+ +N Q ++TA+L+ +S + G + + + Sbjct: 92 TRKAIKLGICDYLLKPVNRFDFLRQLEETAKLMRREAVSDGVEGGGEGAGEGAAAADAVK 151 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 +YID + LT VA+ ++ PNY +LF+K + + YL R+E A+ LL Sbjct: 152 RAMEYIDRYFYQELTLAGVAKEVHMHPNYFGNLFKKKTGVSYLTYLTSVRMEKARELLDN 211 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +LKV EV G+ +F ++F+K+T +P+EYR Sbjct: 212 PNLKVYEVGQIVGYYSPKHFSKVFKKHTNMTPNEYR 247 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Query: 137 QEQQTARLIVASLLSHCRDLLGSQI--QTASRSQALFEAIRDYIDERYASALTRESVAQA 194 Q+ +T L+ SL + DL G ++ Q + + +Y++ Y + ESVA+ Sbjct: 162 QKAETLTLLKRSLYAFFLDL-GKELNCQKEGNGRDIMTDCGEYLENHYMDEINLESVAEK 220 Query: 195 FYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCR 254 ++ +P+Y S LF+ T F+EYL R+E A+ LL + +V+++A G+ D+NYF R Sbjct: 221 YHFNPSYFSTLFKNTYKSTFSEYLIRIRMEKARELLLTTESRVRDIAVLTGYRDANYFVR 280 Query: 255 LFRKNTERSPSEYRR 269 F++ E +P EYR+ Sbjct: 281 AFKRYYEMTPEEYRK 295 >UniRef50_C6CVX2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVX2_PAESJ Length = 492 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 2/99 (2%) Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 E RD +D YA ++ + +AQ +YISPNYLSH+F++ F YL H RLE A +LLK Sbjct: 393 EVTRD-LDRMYAHRISLKEMAQKYYISPNYLSHMFKQEKGQSFIHYLIHKRLEAAVSLLK 451 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D+ + EV G+ D F +LF+K+ SP EYR++ Sbjct: 452 K-DIPLYEVGKLVGYDDYAQFSKLFKKHLGMSPLEYRQR 489 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 21/264 (7%) Query: 24 FASSNGPVPDLAYQV--DFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 + S PVP+ Y DF L + G +++ G TL G VL G ++ ++ Sbjct: 22 WCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFE 81 Query: 80 APATTFSVLFGKQQLG-FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQE 138 A + G L FS V+ K Y ++ ++V L L ++ Q Sbjct: 82 ANTNCRELHIGLTNLNLFSNVK---KDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTY 138 Query: 139 QQTARLIVASLLSHCRDLLGSQIQ-------------TASRSQALFEAIRDYIDERYASA 185 QT+ ++ SL+ LL +I + +AL E+I Y+ E Y Sbjct: 139 NQTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTED 198 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ ++++ Y+SP Y+S +F++ YL RL AK LL L +K +A G Sbjct: 199 ISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVG 258 Query: 246 FVDSNYFCRLFRKNTERSPSEYRR 269 + D YF +L++K SP++ R Sbjct: 259 YSDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM8_9BACL Length = 550 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 2/133 (1%) Query: 148 SLLSHCRDLLGSQIQTASRSQALF--EAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 +LL H + Q++ + + F E I++YID Y + + F++S YL L Sbjct: 418 ALLFHLTEYYHEQVRRSMAAGRPFSVEVIKEYIDHHYFEDIKISMFTERFFLSREYLMKL 477 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ G +EY+ R++ AK LL LK++E++ G+ D NYF + FR SPS Sbjct: 478 FKQQYGCGIHEYVQKVRMDKAKELLDDSSLKIQEISEMLGYKDKNYFSKAFRNYYALSPS 537 Query: 266 EYRRQYHSQLTEK 278 EYR+Q + +K Sbjct: 538 EYRQQQEEERGKK 550 >UniRef50_UPI000178A16B two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A16B Length = 546 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 17/180 (9%) Query: 102 DGKQY-QNLAKQHVARRGPRIGSFLLQT-LNEMQMQPQEQQ-TARLIVASLLSHCRDLLG 158 DG +Y +NL Q V IG L++ + +++ E + T L L R L+ Sbjct: 367 DGLKYGRNLCMQLVLA----IGQLLMELGAGDPELEVMEGELTEALYAKETLKDMRGLIE 422 Query: 159 SQIQTAS---------RSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQK 208 S + T R + E +R YID+ YA+ LT + +A Y+S Y+S LF++ Sbjct: 423 SYLATVGEHIREKRTGRVANVIERVRGYIDQNYANGGLTVADIGKAVYLSSTYVSLLFKQ 482 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 EYL R++ AK LL+ K ++ +A G+ D +YF +LF+K T +PS YR Sbjct: 483 ETGQTVGEYLTKVRVDKAKELLRDPQYKFYDICYAIGYTDPSYFSKLFKKVTGVTPSAYR 542 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 54/93 (58%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 DYI E Y +T VA+ Y+S Y+S +F+K F +YLN R++ AK LLK Sbjct: 442 DYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKELLKDVRY 501 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 K EVA G D +YF +LF+K + +PSEYR Sbjct: 502 KTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYR 534 >UniRef50_C6D214 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D214_PAESJ Length = 746 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 1/110 (0%) Query: 160 QIQTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 ++ + R AL IRDY+ E + L+ ++ F ISP YLS LF+++ + F+++L Sbjct: 626 ELSQSRRHNALMREIRDYVAEHFMDPNLSLTLLSDRFQISPKYLSQLFKESIGLNFSDFL 685 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 R+EHAK LL+ D+ V+ ++ G+ + F R+F+K SP +YR Sbjct: 686 IGLRIEHAKRLLRESDVTVQHISEMMGYANPTSFIRVFKKTVGLSPGQYR 735 >UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZYS8_9FIRM Length = 304 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 67/103 (65%) Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ + L+ ES+A A +S +L+ F+K + NEYL TRL H+KTLLK DL + Sbjct: 199 IDQHFQEPLSLESLAIAAGVSKYHLAREFKKYIGMPPNEYLIVTRLNHSKTLLKYEDLTI 258 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 +E+A++CGF +++ LF+K+ +P ++RR++HS KP+ Sbjct: 259 EEIAYSCGFHQVSHYINLFKKHEGCTPLKFRREWHSNEAVKPS 301 >UniRef50_A9U7S8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7S8_PHYPA Length = 163 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 64/108 (59%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 ++ ++ +AL ++ YI+E Y +T ES A +++P+Y S F+K I F +Y+ Sbjct: 50 ESGNKDKALLAKVKQYIEEHYPEEITLESAAGITFMNPSYFSFFFKKQTGINFKQYVTGI 109 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R++HA LL DL V E+A A G+ ++ +F +FRK P++YR+ Sbjct: 110 RMKHAVRLLLHTDLMVYEIAEAVGYNNARHFSDIFRKTYGSLPNDYRQ 157 >UniRef50_C6LB63 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB63_9FIRM Length = 517 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 7/147 (4%) Query: 127 QTLNEMQMQPQEQQTA----RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERY 182 Q +E M+ + QT R + LL +++ Q R + E R+Y+++ Y Sbjct: 369 QKTDESLMRIYQSQTLERLLRFVYGFLLEIGKNI---NFQKEIRGVDVLEHCREYLEKHY 425 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 +T E +A+ +Y + +Y S +F+ F+ Y+ R++ AK L D K+KE+A Sbjct: 426 MDEITMEMIAEKYYFNASYFSTVFKNYFGKSFSGYMTELRMQKAKEFLISTDWKIKEIAS 485 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRR 269 G+ D+NYF R F+K +P EYR+ Sbjct: 486 KTGYRDANYFIRAFKKFYGYTPEEYRK 512 >UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDZ9_9CLOT Length = 514 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 3/123 (2%) Query: 162 QTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ + SQAL + + Y++ Y L+ + VAQ +++P YLS LF+ + F EY+ H Sbjct: 389 KSLTHSQALVDKAKKYVENHYQDPELSLQEVAQHVFVTPQYLSRLFKGVVKVSFTEYVTH 448 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 R++ A +LL+ + VA G+ DS YF F+K+ SP+E+R+ H + ++P Sbjct: 449 YRMQKAVSLLEDVSSSIHTVASEVGYHDSKYFAVCFKKSIGLSPTEFRKNPHCR--KRPL 506 Query: 281 TPE 283 + E Sbjct: 507 SVE 509 >UniRef50_C6D416 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D416_PAESJ Length = 513 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S + +A+R YI E YA ALT +S+ F+I PNYL LF K F +YLN R++ A Sbjct: 410 SPVIKQALR-YIHEHYAEALTLKSLGLQFHIHPNYLGQLFNKQTGDTFTDYLNKYRIDKA 468 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 K LL LKV E+A G+ ++ YF + F+K+ P +++ Sbjct: 469 KELLADSRLKVNEIARQVGYWETGYFYKQFKKHVGMVPGDFK 510 >UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=Clostridiales RepID=C5ENT8_9FIRM Length = 529 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 6/127 (4%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 I A LLS RDL ++ A+R + Y+ + Y +T E+V + S NY S Sbjct: 408 IQARLLSEARDLRSNE---AARP---IRIAKQYVMQHYQEPITLETVCEDIGFSVNYFST 461 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LF++ GF +YL R+E AKTLL+ L V E+ G+ D +F F K+T +P Sbjct: 462 LFKRETGEGFAKYLTRVRMEEAKTLLRETSLPVAEICEKVGYSDRKHFTHTFHKDTGLNP 521 Query: 265 SEYRRQY 271 +EYR+ Y Sbjct: 522 AEYRKLY 528 >UniRef50_A8VRA4 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRA4_9BACI Length = 229 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I+ YIDE Y LT +++A FY++ YL LF+ T + + +YL R++HA+ LL Sbjct: 127 IKTYIDEHYDQPLTLKAIAGRFYLNHVYLGQLFKDTFGVLYKDYLVTVRVQHARRLLSQT 186 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 D +++E+A GF YF F K T +P+ YR+Q+ + Sbjct: 187 DCRIEEIAERTGFGSPEYFTERFDKVTGMTPARYRKQFRER 227 >UniRef50_B0NBQ5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NBQ5_EUBSP Length = 563 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 4/129 (3%) Query: 149 LLSHCRDLLGSQIQT--ASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHL 205 + CR + G+ IQ + + L E R Y+DE YA A + E++ ++ +ISP Y S + Sbjct: 435 FIQACRQI-GTLIQKERMASGKMLVEKARQYVDENYADAEFSVETLCESLHISPAYFSTI 493 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K I F YL R++ A LL D K +A G+ + NYF F+K SPS Sbjct: 494 FKKEAGINFISYLTDVRMKEAMRLLDETDEKTYMIAAKVGYSEPNYFSYAFKKQVGVSPS 553 Query: 266 EYRRQYHSQ 274 YR+ Q Sbjct: 554 RYRKGLRDQ 562 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 57/98 (58%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI YA L + +A ++S Y+S LF+K + +NEYL R+E AK LLK L Sbjct: 441 EYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMNYNEYLMQVRMEKAKELLKRQTL 500 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 KV + A G+ +++YF +LF+ T SPSEY Q S Sbjct: 501 KVADAAALVGYSNTSYFIKLFKNYTGLSPSEYMEQQRS 538 >UniRef50_C6PAR6 Two component transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAR6_CLOTS Length = 535 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 162 QTASRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 + S L + ++ +I+E + S L+ VA+ FY++P+YLS F+K I F EYL + Sbjct: 421 EQISNINNLIDNVKKFIEENISDSNLSLSYVAKHFYLNPSYLSRTFKKETGINFIEYLTN 480 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R+E A L+K ++K E+A+A G D NYF F+K T + SEY++ Sbjct: 481 KRMEKAINLIKEKNMKSFEIANAVGIQDPNYFSSCFKKYTGLNVSEYKK 529 >UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecalis RepID=C2H3H7_ENTFA Length = 493 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 5/111 (4%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 + S SQA+ + I++ Y L ++VA +++P+YL +F+K F++YLN R Sbjct: 381 SESVSQAV-----ERIEQGYLEELNLKTVADELHLNPSYLGQIFKKETKRSFSQYLNQVR 435 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 +HA+ LL D + E++ GF ++NYF ++F+K +P E+R QY S Sbjct: 436 TKHAQKLLLYTDDTINEISEKVGFNNTNYFSKMFKKLNGITPKEFREQYQS 486 >UniRef50_UPI0001788C2F two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C2F Length = 532 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%) Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 +Q RL L+ +D + + ++ R L E+ + YI+E Y L+ S+A+ + Sbjct: 393 EQAERL----LMQWAQDFVDNLTESGDRDATLIESAKRYIEENYMQELSLTSLAEQYNYH 448 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P Y S +F++ + F +Y+ R++HA LL+ L V ++A GF YF F+K Sbjct: 449 PTYFSEMFKEGAGVSFIQYVTEVRMKHAVRLLQETRLTVWDIAELTGFSSPGYFSSKFKK 508 Query: 259 NTERSPSEYR 268 +SPSE+R Sbjct: 509 MFNQSPSEFR 518 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 EAI+ +ID+R ++ + VA+ +++P+Y S LF++ + F+EYL R++ AK LL Sbjct: 158 EAIQ-FIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAKELLM 216 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 D+ V E+A CG+ + YF LF++ ++PS YR+ Sbjct: 217 TTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRK 254 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 33/170 (19%) Query: 127 QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRD---------- 176 + LNE + P E +R+I ++ DLL ++ + Q F I+D Sbjct: 131 ELLNEFRNVP-EMDYSRVIASA------DLLKLIVENCLKKQLNFVVIKDNPQQSEANKT 183 Query: 177 ----------------YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 YID + L E VA Y+SP Y S LF+K IGFN ++N Sbjct: 184 TRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNR 243 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+ A+ LL D + +A GF ++YFC++FR+ + +P YR+Q Sbjct: 244 QRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQ 293 >UniRef50_B6FJW1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJW1_9CLOT Length = 509 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 ++ YI E Y L +A+ F + +YLS F K GF+ YLN R+E A LL+ Sbjct: 409 MKKYIKEHYQEQLELSEIAENFNFNYHYLSSYFNKHTKEGFSGYLNKIRIEKACELLRKG 468 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D+ + +++ A G+ D +YFCR+F+K +PS Y+RQ Sbjct: 469 DMSISQISAAIGYSDHSYFCRVFKKMIGNTPSSYKRQ 505 >UniRef50_D2EJS9 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJS9_PEDAC Length = 368 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 17/211 (8%) Query: 76 PQWQAPATTFSVLFGKQQLGFSV----------VQWDGKQYQNLAKQHVARRGPRIGSFL 125 P+ + F ++ Q GF++ +Q + NL H A R + + + Sbjct: 64 PEHFGKSIIFPIILNNQVWGFTMCSSAKSSNHRIQVSKEYLSNLFNSHFANRQD-LTAQV 122 Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR------DYID 179 L+ L + Q+ + L + S ++ + ++ S FEAIR +YI Sbjct: 123 LEPLTDEQLTKINYLSTLLQLKSSANNVLPIATAEDPQVRTSTEKFEAIRSIKEATNYIC 182 Query: 180 ERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKE 239 E S LT +VA+ ++SP+YLS +F+K I F Y+N ++ HA+ L + Sbjct: 183 ENLTSQLTLSTVAEHVFLSPSYLSRIFKKYMDINFINYINQQKIAHAQRELILSRKPINL 242 Query: 240 VAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +++ GF ++YF ++F+K T +PS+YR++ Sbjct: 243 ISNIAGFSQTSYFTKIFKKITGTTPSKYRKE 273 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Query: 167 SQALFEAIR---DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 + ALF IR +YI+ YA ++ VA+ +++P+Y S +F+K F +YLN R+ Sbjct: 313 NTALFVPIRKVINYINTYYAEEISLHKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRI 372 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EH K LL + V EVA GF YFC +F+K +P+++R+ Sbjct: 373 EHGKLLLMDTSMTVLEVAIEVGFDTDTYFCTVFKKVVGVTPNQFRK 418 >UniRef50_C6CVW8 Two component transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=C6CVW8_PAESJ Length = 543 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 +A+ SQ + EA + YA +LT +SVA A +++P +LS LF+K F EYL R Sbjct: 431 SATPSQIICEA-EKILQRDYAESLTLQSVASAVHVTPVWLSKLFKKEKRQTFLEYLTDIR 489 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +E AK +L KV ++++ G+ D +F +LF+K +P EYRRQ Sbjct: 490 IEKAKEMLGDIQYKVYQISYQVGYKDPVHFSKLFKKQVGCTPKEYRRQ 537 >UniRef50_C6JC74 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC74_9FIRM Length = 240 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 53/83 (63%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 + I+E Y L +++A+ F+++P YL +LF K I F+ YL R+E AK LL G D+ Sbjct: 143 NVIEESYGMKLQLDAIAEKFHMTPEYLGNLFAKETGITFSNYLRQVRMEKAKELLTGTDM 202 Query: 236 KVKEVAHACGFVDSNYFCRLFRK 258 K+ EVA A G+ D YF ++F++ Sbjct: 203 KIYEVACAVGYPDQKYFSKVFKE 225 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 57/94 (60%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+E ++ L+ +A F+ +P+YLS F++ GF+EYLN R+ AK LK + Sbjct: 408 YIEEHHSEPLSLSQLANYFHFNPSYLSAYFRQHHDEGFSEYLNKVRIRKAKEWLKSSTIP 467 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + E+ G+ D +YFC++F+K T PS YRR+ Sbjct: 468 ISEIYALVGYSDHSYFCKVFKKRTGMPPSRYRRE 501 >UniRef50_C0BZ09 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ09_9CLOT Length = 248 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 63/100 (63%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 E + +YI E A L+ ++++ + SP+YLSHLF + + ++N R+E++ LL Sbjct: 145 IEPVAEYIMEHLAEDLSLRTLSEQVHFSPSYLSHLFHEKRGMTIRHFINQKRIEYSVQLL 204 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + D +KE+A ACGF + ++F R+F+ +T ++P E R++ Sbjct: 205 RHSDKNIKEIASACGFSNISHFNRVFKLHTGKTPVELRKE 244 >UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococcus RepID=C8ZXM2_ENTGA Length = 495 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 ++ L + L Q Q S+ + +A+ I+E Y LT +S A+A ++S YL Sbjct: 362 VLRQLFNEILQLAKDQPQQKRYSEIVQKAV-GMIEEHYTQELTVKSAAEALHVSVVYLGQ 420 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 +F+K + FN+Y+N R++ A+ LL + E+A A G+ ++NYF ++F+K +P Sbjct: 421 VFKKETELSFNQYVNFIRIKKAQQLLLHTGQTINEIADAIGYNNTNYFSKMFKKLNGLTP 480 Query: 265 SEYRRQYH 272 E+R +Y Sbjct: 481 KEFREKYE 488 >UniRef50_C6JHI8 Response regulator receiver protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHI8_9FIRM Length = 522 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 1/118 (0%) Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 I+T+++ Q + I DYI Y L+ +VA++ ++SP+YLS L F + +N Sbjct: 405 IKTSTK-QDIVNKITDYISNHYMEQLSLSTVAKSVFLSPSYLSSLITGETGKNFTDIVNE 463 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 R+ + LLK +++ ++A++ GF + YF +F+K T +P +YR Y S +TE+ Sbjct: 464 IRISKSIELLKNPKMRIADIAYSVGFNEPQYFSSIFKKCTNLTPRDYRDFYLSSVTER 521 >UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1Q8_9BACL Length = 542 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 62/106 (58%) Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 A+ +++ E I+ YI Y LTR +A+ Y++P+YL+ LF+K I Y+ R+ Sbjct: 423 AAEPKSVAEEIKQYIHAHYGDELTRNDLAEVVYLNPDYLARLFKKETGISLGSYVIQVRI 482 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 AK LL+ L V VA+ G+ + +YF +LF++ +P+EY++ Sbjct: 483 SVAKQLLETTKLSVYAVANQVGYANYSYFSKLFKQEVGVTPNEYKK 528 >UniRef50_UPI0001788F00 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F00 Length = 533 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 61/111 (54%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + IR YI+ Y ++ + +A FY++P YL LF+K + FN++L R+ AK LL Sbjct: 422 IQKIRAYIEAHYHENISLKGIAGKFYMNPVYLGQLFKKAYGMYFNDFLLQLRVNEAKRLL 481 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 + DL++ EVA GF + +YF F K +PSEYR + + + T Sbjct: 482 RQTDLRIYEVAERVGFGNPDYFVTQFEKIERMTPSEYRNRLMKEAASEGTN 532 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 ++ SLL RD + Q+Q ++ +A YI + ++ VA ++SP Y S Sbjct: 151 LILSLLVRNRDHI--QLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPTYYSK 208 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 F++ +GF EYL TRL A LL L V E+A CGF D NYF FRK SP Sbjct: 209 KFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEFGLSP 268 Query: 265 SEYRRQ 270 +YR++ Sbjct: 269 LQYRKR 274 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 21/239 (8%) Query: 43 LEIVLEGE-FVDTGAGATLV-PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ 100 + I ++ E F TG +V PG++ Y+ + N A +++LF + + F Sbjct: 50 INITIDNELFTGTGGSFFIVNPGELHYMGSNDLN-------ADYYTILFPLEFISFQSND 102 Query: 101 W-DGKQYQNLAKQHV--------ARRGPRIGSFL--LQTLNEMQMQPQEQQTARLIVASL 149 + + ++ + HV + I S L L +N+ + + Q ++++ + Sbjct: 103 YVENMLFKPMRSSHVILTHSLPYSEIYAEIISLLEKLIYINKYE-KGFYQLDCKILLLEI 161 Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 LS+ + ++ S + + I Y+++ Y +T +A F++S Y+S F+K Sbjct: 162 LSNILSIPDILVKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKH 221 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 I F++Y+NH RL +AK LL ++ + +VA + GF + +YF R F+++ ++P YR Sbjct: 222 FNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 62/112 (55%) Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 +I S + + I+ Y+D+ Y +T + ++ F+I+ YL +F++T I YLN Sbjct: 177 KIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKIFRETYGITIVNYLN 236 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 R+ AK LL+ +L ++E+A G D+NYF R F K PSE+R+ + Sbjct: 237 QKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPSEFRKMW 288 >UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDJ0_9FIRM Length = 517 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 R YI+E Y ++ E +A ++ + +Y S LF++ I F+EYL+ R+E A+ LLK Sbjct: 420 RRYIEEHYQDEISLEQIAALYHFNASYFSTLFKQRFGISFSEYLSDIRMEKAENLLKTSS 479 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 KV+++A G+ D NYF R F+K +P E+R++ Sbjct: 480 DKVRKIALEVGYKDPNYFNRAFKKRHNMTPEEFRKR 515 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 7/224 (3%) Query: 49 GEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQL---GFSVVQWDGKQ 105 GE + G L PGD++ V G + + A A + + G ++ Sbjct: 53 GEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRDFAVPGLPAGCLSQEK 112 Query: 106 YQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ-EQQTARLIVASLLSHCRDLLGSQIQTA 164 Y+ L+ ++ +L + L E Q + Q+ ++ +V++LL L+ + Sbjct: 113 YRVLS---CGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDE 169 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + + I++Y+D+ + S +T +S+++ YIS +YLSHLF++ + +YL R+E Sbjct: 170 AALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRME 229 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 A LL +L V EV+ A G+ + YF ++F++ SP +YR Sbjct: 230 KACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 13/159 (8%) Query: 122 GSFL---LQTLNEMQMQPQEQ--QTARLIVASLLSHCRDLLGSQ--------IQTASRSQ 168 G+FL Q ++E+ Q E Q L++ L+ R L Q +T R + Sbjct: 114 GAFLEKAWQIVHELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKR 173 Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 L Y++ + +T E +A+ Y++P YLS F+ +G YL RL HAK Sbjct: 174 NLVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKE 233 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 LLK L VKEVA G+ D+ +F +LF+K +SPS++ Sbjct: 234 LLKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_UPI0001788C87 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C87 Length = 515 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 4/120 (3%) Query: 158 GSQIQTASR---SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 SQ++ S+ +F+ I+ Y+D Y S L + +A+ F+++ YL LF+K F Sbjct: 395 ASQLEELSKLNEHNTIFQVIQ-YVDREYRSRLQLQDLARHFHMNATYLGQLFKKHAGKPF 453 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 EYLN R+E AK LLK +KV E+A GF +++YF F+ T PS Y+ S+ Sbjct: 454 KEYLNDKRIEEAKLLLKRSGMKVSEIALHVGFPNADYFIHKFKLTTGILPSNYKNHVESK 513 >UniRef50_A5ZVU5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVU5_9FIRM Length = 509 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 62/108 (57%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 ++ S S+ A+++YI + Y L E +A+ Y+S YLS +F+K + N Y+ Sbjct: 393 RSMSSSRNEVAAVKNYIYQHYEEDLNLEMLAEKVYLSSGYLSFIFKKETGMNLNRYIRVF 452 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R+E AK LL ++KV +V+ GF + +YFCR FR+ SP YR+ Sbjct: 453 RMEKAKELLCSTNMKVAQVSERVGFANVSYFCRSFREYYGSSPESYRK 500 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 58/100 (58%) Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + + YI + Y AL+ E +A FY++ YLS +F++ NEY+N R+ A+ LL Sbjct: 184 DEVASYIIDHYDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLS 243 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + + EV+ + G+ YF R+F + T+ SPS YR+QY Sbjct: 244 NTSMSITEVSESVGYETITYFERVFHQYTQTSPSGYRKQY 283 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 3/112 (2%) Query: 158 GSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEY 217 GS + T + + +AI+ YI++ +A+ LT + VA+ ++SP++ LF+KT + F ++ Sbjct: 173 GSMVSTPTNNMD--DAIQ-YINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQF 229 Query: 218 LNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L + R++ LLK ++ ++E A+ G+ D +F LFRK T +P EYRR Sbjct: 230 LQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKKTGVTPREYRR 281 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 56/94 (59%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +DYI + + ++ E VA+ ISP Y S LF++ + F EYL R+E AK LL + Sbjct: 429 QDYIRQNFRKDISLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERE 488 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L +K+V G+ + NYF R+F+K +P+E+R Sbjct: 489 LSIKQVCVDSGYANPNYFSRIFKKWVGITPTEFR 522 >UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6V9_9BACL Length = 517 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 57/101 (56%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L I +YI+ Y +L+ + A F +SPNY+S LF++ G +Y+N R+ AK L Sbjct: 415 LIRNILEYIEHHYQDSLSLKLFADLFQVSPNYVSRLFKEEVGQGLFDYINELRINKAKEL 474 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 LK Y K+ EVA GF + +F +F K T SP +YR + Sbjct: 475 LKDYRYKIYEVAEKVGFSNQAHFAIVFNKYTGVSPKQYRNE 515 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 159 SQIQTASRSQALFEA---IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 + +Q S F+A I DYI + + L+ +S+A+ FYIS YLS F + G N Sbjct: 183 NDVQEGKASGGKFDAVYQISDYISDHFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGIN 242 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EY+N R++ A++LL+ L V E+A GF Y R+F+K +P++YR+ Sbjct: 243 EYINILRVKKAQSLLETTTLSVSEIASRTGFESITYLGRVFKKYQHVTPAQYRK 296 >UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ7_EUBSP Length = 515 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + E +I + A+AL+ E +A+ +IS ++LS F+K EY+N TR+E AK Sbjct: 403 IIENTIKFIHQNLATALSLEVIAEHLHISASHLSRTFKKYCDESLTEYVNKTRIEKAKEY 462 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY--HSQLTEK 278 LK ++ E+A+ G+ D+ YF +F+K T SPSEYR++Y H +E+ Sbjct: 463 LKDSNMLTYEIANQVGYNDATYFSSIFKKYTGFSPSEYRQKYAPHQHFSEQ 513 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 65/126 (51%) Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 L+H + L + + + ++Q L YI Y LTR+ +A +S +YL+H F++ Sbjct: 1076 LAHLQAALERRRRLSDQAQMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQE 1135 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EYLN R+ A+ LL D + +A GF S+YF R+FRK +SP EYRR Sbjct: 1136 LGTTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 Query: 270 QYHSQL 275 S + Sbjct: 1196 LKQSSV 1201 >UniRef50_C6LKL3 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKL3_9FIRM Length = 538 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 57/106 (53%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 Q S + E + YI LT A F ISPNYLS LF+K +GFNEY+ Sbjct: 425 QRKSNVNFMVENVTKYIASNIDKRLTLHDTALTFNISPNYLSQLFKKYRNVGFNEYVTQQ 484 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 ++ AK LL+ L+V E+A GF ++ YF ++F+K SP EY Sbjct: 485 KINAAKELLQQGSLRVYEIADRLGFENAFYFSKVFKKYEGCSPREY 530 >UniRef50_UPI0001C350B3 two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C350B3 Length = 455 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 11/110 (10%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I D+I+ER LT V+ F IS NYLS LF+K IGF+EY+ T++ +K++L Sbjct: 354 INDHIEER----LTLNEVSDVFGISHNYLSVLFKKNCGIGFSEYITQTKIARSKSMLLEE 409 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 +LK+ EVA GF YF ++F+K SP EY L EK PE Sbjct: 410 NLKIYEVADRLGFETPCYFSKVFKKVEGVSPREY-------LQEKTVAPE 452 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 60/108 (55%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 + ++ L + ID Y +T +S++ Y+SPNYL +F+ + ++YL Sbjct: 424 RATDKNAKLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRI 483 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 RLE AK +L LKV+++A G+ ++YF LF KN +P+EYR+ Sbjct: 484 RLEKAKEMLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNEYRK 531 >UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0J9_9BACE Length = 425 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 11/159 (6%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 + +LNE+ Q +R +VA + D+ Q +S A A+ YI+ Y Sbjct: 278 FINSLNELNTLDSLAQWSRELVAHFVD---DIFADLPQVSS---ATTRAV-SYINAHYMD 330 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 LT +A A +++ + LS LF++ F +YLN R+EH+ L++ D + E++ Sbjct: 331 KLTLRDLASALFLNESSLSKLFRQELGTSFTDYLNRIRIEHSTELMRNTDRSLLEISGLV 390 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 GF D +YF ++F+K T +P RQY SQL + T + Sbjct: 391 GFDDQSYFTKIFKKVTGTTP----RQYKSQLNNEKHTSD 425 >UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG6_9CLOT Length = 517 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 6/164 (3%) Query: 109 LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ 168 L+ H+ +I S L Q +++ Q +TA + A L LG + AS S Sbjct: 350 LSSDHIQYAAFKILSSLDQDNDDLFKQAIGLRTADDLFAMLRE-----LGQSPEDASNSD 404 Query: 169 ALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 +L + Y+ + Y +L+ AQ+ Y+SP+YLS +F++ + F +YL R+E AK Sbjct: 405 SLINRVAAYLSQNYPDPSLSLNKAAQSVYVSPSYLSRIFKQKLNLSFTDYLVKLRMEEAK 464 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 L K +LK ++A G+ D++YF F+K +P YR+ Y Sbjct: 465 KLCKQKELKTAQIAAKVGYRDASYFTLCFKKYFGMTPGCYRKTY 508 >UniRef50_UPI0001C35FBC two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35FBC Length = 508 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 53/92 (57%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI E YA L E VA +PNY S +F+ + F EYLNH R+E AK L++ D+ Sbjct: 412 YIQEYYAKDLLVEEVAAYIGKTPNYFSSIFRTEVGVTFREYLNHYRIERAKELIEESDMM 471 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + E+A G+ D YF ++F+K T SP+ R Sbjct: 472 IYEIAEQVGYSDYTYFSQVFKKMTGISPTSMR 503 >UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostridium butyricum RepID=B1QZ71_CLOBU Length = 414 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 66/118 (55%) Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 +++L S + + + + + +DYI Y ++ + VA Y+S NYLS LF+K Sbjct: 294 LKEILNSDLNDVNNNITVIKLAKDYIINNYNKNISLKDVADEVYLSQNYLSELFKKEIGE 353 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 GF ++L+ R++ AK +L +LKV E+A G+ DS F R F+K T +P+ +R Sbjct: 354 GFYDFLSKYRIKKAKEVLLTTNLKVYEIAQMVGYNDSITFGRAFKKITGTTPNNFRNN 411 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 76/154 (49%) Query: 117 RGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRD 176 +G R+ + L + + E++ + + + ++ L L + + + + + + Sbjct: 185 KGLRVSAALARQVTELRTMSLDDRGLQSVLGVFLGLADLLFDVREEQLDEAGSTVQKAIN 244 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+ + +T E A IS YLS +F+KT + F YL R+E AK LL G + Sbjct: 245 YIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELLAGTERS 304 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + +A + D NYFC+ F+K SPSEYRRQ Sbjct: 305 ITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQ 338 >UniRef50_C5RM76 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM76_CLOCL Length = 364 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 60/102 (58%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 SQ + + I +YI ++ L +++A+ FYI+ YLS+ F +GFN+Y+ RL A Sbjct: 259 SQGIIKEICEYILNNPSADLKLKAIAEKFYINNTYLSNNFATKTGVGFNDYVTMVRLARA 318 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + LL LK E+ G+ D NYF +LF+K ++PSEYR Sbjct: 319 RYLLVNTKLKNYEIGSQIGYHDINYFSKLFKKEYGKNPSEYR 360 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 56/91 (61%) Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ Y ++ SVA+ I+P YLS LF K + F +YL R+E AK+LL+ ++K+ Sbjct: 383 IDKSYKEPISLNSVAEQLNITPQYLSRLFMKEMSRSFVDYLTSYRMERAKSLLQDTNMKI 442 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + G+ D+ YFC LF+K T +P++YR Sbjct: 443 NMICVQVGYQDAKYFCTLFKKITGVTPNQYR 473 >UniRef50_C6CXU8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU8_PAESJ Length = 529 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S+ E + YI + YA L+ E VA ++P+Y S LF + I F +YL R+ A Sbjct: 418 SRGNMEKAKSYITDHYADDLSLEVVADYVQLNPHYFSKLFHERCGITFVDYLTQVRISKA 477 Query: 227 KTLLKG-YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 K LL ++ +KE++ G+ D NYF R+F+K T SPSE+ RQ HS Sbjct: 478 KELLAADFEQSLKEISMRVGYRDPNYFSRVFKKLTGLSPSEF-RQTHS 524 >UniRef50_UPI00017884AA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017884AA Length = 404 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 53/96 (55%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I++YID Y ALT +A I P Y LF+KT +YL H R+ HAK L Sbjct: 26 IKEYIDSHYHEALTIGQLAGMANICPKYFVDLFKKTFGQTTIDYLTHVRMNHAKRYLAES 85 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 D +++++A G+ D YF R+F+K SPSEY R Sbjct: 86 DDRLRDIAQKVGYKDEFYFSRIFKKKVGMSPSEYAR 121 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 59/100 (59%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I DY+D Y ++ VA F++ P+YLS LF+ + F EY+ R+E A LL+ Sbjct: 438 IVDYLDAHYFEDISLIDVATRFHLDPSYLSKLFKSVTSENFIEYVTRKRIEKACELLRSS 497 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + K+ E++ G+ + YF ++F+K+T ++PSEYR S Sbjct: 498 ERKISEISELIGYENQRYFSQVFKKSTGQTPSEYREAQQS 537 >UniRef50_A8RP07 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RP07_9CLOT Length = 541 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 5/124 (4%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSH 204 + SL C +L S+ S S + + I Y++ Y + A+ FYI+ +Y+S Sbjct: 412 MFTSLYCICDELKESR----STSDIMLQ-IAQYMELNYTKPFIQSEYAKLFYINKDYMSR 466 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 F T + YLN R+ HA+ LL + LK++++A+A GF D YF + F+K T +P Sbjct: 467 KFTSTFHVNMLTYLNQIRIRHARELLSDFSLKIQDIAYAVGFKDEKYFAKQFKKLTNTTP 526 Query: 265 SEYR 268 +YR Sbjct: 527 GDYR 530 >UniRef50_C9A517 Helix-turn-helix domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9A517_ENTCA Length = 737 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 24/244 (9%) Query: 33 DLAYQVD------FPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFS 86 D+A Q+D +PR E F+D L Y + + P T S Sbjct: 509 DIAAQLDNNAIVQYPREA---ESTFLDAMRSGELATIKASYTEVVREIIHENKNPLTIES 565 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIV 146 LF +L S+VQ Q L H + + R LN+ + EQ + +V Sbjct: 566 ALF---KLINSIVQLG----QLLGADHTSLQNSR--KVYQSVLNQTSLFKVEQIIYQELV 616 Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 ++ +Q +T ++L E + + ++Y L+ +S+A+ + + NYLS++F Sbjct: 617 LPIVE------TTQAKTDREIRSLSEKMVLIVHQQYDQDLSLDSIAEQLHYNANYLSNVF 670 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 +K +I F +YL + RL+ AK L+ D+ +KE+A + +S F R F+K + +P E Sbjct: 671 KKELSINFADYLQNYRLQIAKKWLRETDMTIKEIAANLQYTNSQNFIRFFKKKEQMTPGE 730 Query: 267 YRRQ 270 YR++ Sbjct: 731 YRKR 734 >UniRef50_C1I3E9 Response regulator receiver protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3E9_9CLOT Length = 522 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + ++ +D++ + + + I +YI+E Y L +A+AF + YLS Sbjct: 385 INHIILELKDIISKNVNMEEQR---IKEILEYINEHYDKPLELSDIAKAFNFNYYYLSFY 441 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F GF+EYLN R+E A LLK V E++ G+ D +YFCR+F+K +PS Sbjct: 442 FNNHCKEGFSEYLNRIRVEKACELLKENKAYVSEISSIVGYSDHSYFCRVFKKIVGYTPS 501 Query: 266 EYRR 269 YRR Sbjct: 502 NYRR 505 >UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B093_RUMGN Length = 413 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 9/144 (6%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 +L++L + QQT L +CR + Q + S ++ + Y++ ++ Sbjct: 265 MLESLTSATQCLRAQQTIAL------GYCRIVKEHQHKIHS---SIIRKVVAYLETDLSA 315 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 LT ++AQ ++ +YLS LF K +Y+NH R++HAKTLL D+ +K++A C Sbjct: 316 DLTLNTLAQHLGVNASYLSTLFTKEMGTSLTDYVNHYRIDHAKTLLANTDVPIKDIALRC 375 Query: 245 GFVDSNYFCRLFRKNTERSPSEYR 268 G D +YF RLF++ + +P +R Sbjct: 376 GIGDVHYFTRLFKRISGMTPKAWR 399 >UniRef50_A6LW09 Response regulator receiver protein n=2 Tax=Clostridium RepID=A6LW09_CLOB8 Length = 446 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 64/119 (53%) Query: 157 LGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNE 216 LG + LFE+++ +I E + L + VA F +S Y S F++ + F+E Sbjct: 327 LGKNKNSNKIKMKLFESVKQFIRENIETELELDKVASNFGLSVYYFSRTFKEVTGVNFSE 386 Query: 217 YLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 Y+N R++ AK LL ++ VKEV + G+ D NYF ++F+K SP+ ++ ++ Sbjct: 387 YVNKCRIDVAKELLSTGEMNVKEVCYKVGYNDPNYFSKVFKKYEGVSPANFKGNMEEKI 445 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF-QKTGAIGFNEYLNHTRLE 224 + + + +++Y+ E Y+ +T ++ F+ISP YLS F QKTG N +L R+ Sbjct: 419 KKKDIIAEVKEYVAEHYSEPITLADLSARFFISPYYLSQFFKQKTGDTYVN-FLTRIRIN 477 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LL+ DLKV EV G+ D+ +F R+F K T P +YR++ Sbjct: 478 KAKELLERTDLKVYEVCQMVGYSDTQHFARMFEKLTGYKPRDYRKR 523 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 57/98 (58%) Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 E I YI E YA + + VA YIS NYLS LF++ F +YL R+E AK+++ Sbjct: 301 EFIIQYIHEHYAENIHLQDVADQVYISKNYLSTLFRQFTGETFGDYLTRVRMEKAKSMVL 360 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L + E+A G+ + YF LF+K+T RSP+E+ R Sbjct: 361 EKKLLIAEIAERVGYRNVPYFTTLFKKHTGRSPTEFYR 398 >UniRef50_UPI0001C3522D two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3522D Length = 495 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 60/114 (52%) Query: 157 LGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNE 216 L SQ Q S + IR YI + Y L+ ++ FYISPNYL +F+K + Sbjct: 379 LLSQTQKNQGSCLKSDKIRQYIYQNYTQPLSLNDISSHFYISPNYLCSVFKKETGCNLMK 438 Query: 217 YLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 ++N RLE A LL ++KV ++A GF + +YF + FR SP YR++ Sbjct: 439 FINEYRLEQAAKLLLETEMKVNKIAETVGFSNPSYFSQRFRDYYGESPENYRQK 492 >UniRef50_C6CZ56 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ56_PAESJ Length = 519 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 64/111 (57%) Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ + + LF+ I ++DER +T + VA F +PNYL LF++ F+++LN Sbjct: 407 VKRQKQKRKLFDNIMAFVDERLEQKITLKEVAAHFDFTPNYLGTLFKEETGTLFSDWLNE 466 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 R++ + LL LKV E+A G+ + YF R F++ T +P EYR+++ Sbjct: 467 RRMDRVRELLADPCLKVYEIAERVGYKNIIYFNRQFKQFTGMTPGEYRKKH 517 >UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepID=A8FI25_BACP2 Length = 472 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 11/128 (8%) Query: 150 LSHCR-------DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 L+ CR D+ ++ QT + E + YI + +T E A +SP Y Sbjct: 345 LAECRQCCEHLFDVYEARTQTVND----MERAKRYIKTHFCEQITLEQTAAYVDLSPTYF 400 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 + F+ + F EY+ + RL+ K LLK L +KE+ + G+ D NY R+F+K Sbjct: 401 TKRFKDVTGLTFKEYVTNCRLDKIKKLLKDSSLSLKEITYQAGYTDPNYVSRVFKKMVGC 460 Query: 263 SPSEYRRQ 270 SP EYR+Q Sbjct: 461 SPKEYRKQ 468 >UniRef50_D2LWA9 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWA9_BACS4 Length = 525 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 60/97 (61%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 ++ Y++ Y ++ +S+A+ FY++P Y+ LF+KT + F E++ R++ AK LL+ Sbjct: 425 VKAYVESNYHKNISLKSIARQFYMNPVYMGQLFKKTFGMYFKEFVLKLRMDEAKKLLRQT 484 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D+ V E+A GF ++YF F K + +P+EYR + Sbjct: 485 DMLVYEIAENVGFGSTDYFVTQFEKKCKMTPTEYRNE 521 >UniRef50_C6IZZ6 Transcriptional regulator n=2 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZZ6_9BACL Length = 776 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 S+ QTA R++ L E + + +++A+ ++ E+ A F +P LS LF++ I F +Y+ Sbjct: 664 SEDQTA-RAKPLIEQVTAMLKDQFAAGISLEACAHHFNTTPYTLSRLFKQVTGINFIDYV 722 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+E AK LL+ D+KV E+A G S YF RLF++ + +P +YR + Sbjct: 723 TALRIEKAKELLRDSDMKVNEIAEQVGLQPS-YFIRLFKRFEQITPGQYREK 773 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 23/248 (9%) Query: 33 DLAYQVDFPRLEIVLEGE-FVDTGAGATL-VPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 + Y V + +L +L+GE +V G VPG ++ +PA ++SV+ G Sbjct: 36 EFDYTVSYNKLYFILDGEGWVKIGDEELYPVPGQLVLMPA---------RTRQSYSVISG 86 Query: 91 KQQLG----FSVVQWDGKQYQNLAKQHVAR-RGPRIGSFLLQTLNEMQMQPQEQQTARL- 144 + L FS D + L H G L Q L + + ARL Sbjct: 87 RPYLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQL--VDAHRSDTLAARLR 144 Query: 145 ---IVASLLSHCRDLLGSQIQTAS-RSQALFEAIRDYIDERYASALTRESVAQAFYISPN 200 ++ +LS + QI ++ YI +T E +A ++ PN Sbjct: 145 EKSVMLDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPN 204 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 Y F++ I +YL+ R+E AK +L+ L +KE+A A GF +NYF + FRK Sbjct: 205 YFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEV 264 Query: 261 ERSPSEYR 268 SPSEYR Sbjct: 265 GYSPSEYR 272 >UniRef50_UPI0001C3678C two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3678C Length = 539 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 63/111 (56%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 R + + IRDY+D + L+R+ +++ +++P+YLS LF+K + + YL R Sbjct: 422 VVERPHTIVDTIRDYMDHHFQENLSRDDLSRLVFLNPDYLSRLFKKEMGLSISSYLIQKR 481 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 ++ AK LL V ++ G+ + YF ++F++ T SP+EYR++ S Sbjct: 482 IDLAKELLSTTRTPVSVISSQAGYDNFAYFTKVFKEKTGMSPNEYRKKCQS 532 >UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D789_9CLOT Length = 535 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 + YI E YASALT E V+ +SP YL+ +F+K + F EY++ R++ AK LLK Sbjct: 438 KQYIGEHYASALTLEEVSAVAGLSPAYLATVFKKDTGMTFLEYVSKVRMDMAKQLLKETS 497 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 V ++ G+ D YF + F K + P+EYR+ Y Sbjct: 498 CTVADICEKVGYSDVRYFTKTFTKYSGLKPNEYRKLY 534 >UniRef50_UPI00017885E1 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017885E1 Length = 513 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 5/120 (4%) Query: 155 DLLGSQIQT-----ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 D G I+T ++ L +R ID+ + A+T S++ Y+SPNYL +F++ Sbjct: 392 DYAGHAIRTLEHRFMDKNARLVHQVRTTIDQTFHQAITINSLSDQVYLSPNYLRSIFKEK 451 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + ++YL RL AK LL LKV+++A G+ ++YF LF K+ +P+EYR+ Sbjct: 452 TGMTIHDYLTKIRLNKAKELLADDSLKVQDIAQRVGYESTSYFISLFLKSQGVTPNEYRK 511 >UniRef50_A9U6D3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6D3_PHYPA Length = 514 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 64/113 (56%) Query: 156 LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 L Q Q R+ + + I YI+E + L+ +A+ Y +P+YLS F++ I + Sbjct: 396 FLSKQTQERDRASLIVDRICQYIEEHLSEDLSLVRLAEIHYFNPSYLSRFFKQEKGINLS 455 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++++ R++ AK +L+ DLKV+EV + G+ ++ F R F+K +P EYR Sbjct: 456 DFIDKCRVKKAKEMLRDNDLKVREVGLSVGYEAAHSFTRFFKKAAGLTPQEYR 508 >UniRef50_UPI0001C360A5 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C360A5 Length = 402 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 166 RSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 R+ + + I+DY+ Y S ++ E++A + P Y+S LF+K + F++YL+ R+E Sbjct: 294 RADYVGKYIKDYVQHHYMDSTVSIETIASMLNLVPTYVSTLFKKEAKVSFSQYLSDYRIE 353 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 AK LL+ D KVK++A GF N F R+F+K +P EY+ S Sbjct: 354 QAKYLLEHTDKKVKDIASETGFGTYNNFTRVFKKKLGVTPIEYKNHKQS 402 >UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIX4_BACSK Length = 765 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 6/137 (4%) Query: 136 PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ--ALFEAIRDYIDERYASALTRESVAQ 193 P ++Q V+ L+ D L S + S SQ L E + DYI + Y A+T E A Sbjct: 629 PSQEQMKNWFVSRLI----DPLLSAFKQVSESQFQHLSEKMIDYIHQHYHQAVTLEQCAA 684 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 + + NYLS +F++ A+ F+EYL RL+ AK L VK +A G+ +S F Sbjct: 685 DLHYNANYLSSVFKEGTAMTFSEYLAQYRLKKAKEWLAKTSEPVKTIAEKLGYNNSQNFI 744 Query: 254 RLFRKNTERSPSEYRRQ 270 R F+K T +P +YR+Q Sbjct: 745 RSFKKMTGMTPGQYRQQ 761 >UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW7_9FIRM Length = 504 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 127 QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY--------I 178 Q MQ E+ A + L C +I+ + E IR+Y I Sbjct: 355 QAYRRMQESEIEKTAATALTIKTLEDC---FRREIEIILSEKDKKEDIRNYTIRRAINFI 411 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 E Y ++ E +A+ I+P YLS LF K I F +L R+ HAK LLKG K+ Sbjct: 412 REHYRENISLELLAEHLEITPEYLSTLFNKEVGINFTTFLKRFRISHAKRLLKGSSKKIY 471 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 E++ G+ D YF R+F++ SP +YR Sbjct: 472 EISEEVGYHDPKYFNRVFKEEVGVSPGDYR 501 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 25/245 (10%) Query: 39 DFPRLEIVLEG--EFVDTGAGATLVPGDVLYV-PAGGWNFPQWQAPATTFSVLFGKQQLG 95 DF L IV +G + + L + Y+ P F Q T ++LF K +L Sbjct: 34 DFHELMIVTKGAGQHILNDVPINLAQNYICYISPKDRHLFEQSDNLHLT-NILFQKNKLA 92 Query: 96 FSVV-------QWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVAS 148 +S + + D +Q ++ + + ++ + + Q +E + E +RL+ + Sbjct: 93 YSPLLKSVLPKESDAQQSWYISTETM----KKVCTLMAQIEHESSLHSVE---SRLMTEA 145 Query: 149 LLSH-----CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 L R L SQ AS + L I D+I YA ++ F IS LS Sbjct: 146 LFQQLVVEISRGRLTSQSNNASDNSIL--KIIDWIQNNYAEEFNVGDISDQFEISSRTLS 203 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 ++ + FN Y++ R+ HA LL DL V ++A G+ DSNYF F++ T ++ Sbjct: 204 RRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIAFQVGYKDSNYFSTKFKRFTNKT 263 Query: 264 PSEYR 268 P+E+R Sbjct: 264 PTEFR 268 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 3/118 (2%) Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 C L S+ + A ++ + ++YI+E + ++ + V++ ISP Y S LF++ Sbjct: 415 CTKLENSKEKEAG---SIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGK 471 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 F EYL RL++A+ LL+ L +KE+ G+ D NYF R+F+K +PSE+R + Sbjct: 472 NFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_UPI0001C36A4D two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36A4D Length = 508 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 R+YI++ Y+ LT E +A +++P Y S F+K F +YLN R++HA LL D Sbjct: 409 REYIEKHYSENLTLEVLAGEIHMNPYYFSSFFKKNSGENFKDYLNKVRMKHAIDLLVSTD 468 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 K E+A GF DS F LF + +PS YR++ Sbjct: 469 KKTAEIAADVGFRDSRSFSELFSRIYGETPSNYRKR 504 >UniRef50_C6D7J5 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7J5_PAESJ Length = 544 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 68/125 (54%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 +A + H D+ Q +S+ A+F I+ +I++ L+ + VA F+ +P+YLS L Sbjct: 415 LALWVVHLNDVYSKQTHQSSQENAVFNQIKGFIEKNIDQELSLQMVADHFFYNPSYLSRL 474 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+ + ++ R+++AK LL+ + V +V CG+ +F ++FR +P+ Sbjct: 475 FKSKLNQNYLSFVTEIRIDYAKKLLRDTNRLVTDVCTMCGYKSYKHFVKMFRLVAGTTPT 534 Query: 266 EYRRQ 270 +YRRQ Sbjct: 535 DYRRQ 539 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 + I +S+ Q ++ I DYI + YA +++ + +A FY+S YLS F++ G NEY+ Sbjct: 174 TAIHKSSKYQTIYN-IADYISDHYAESISLDGLAGVFYLSKFYLSRSFKEVTGYGVNEYV 232 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 N R + AK LL+ L V E+A G+ YF ++F+ SP +YR+ + + Sbjct: 233 NILRTKRAKQLLEETTLSVSEIAGTVGYESITYFEKVFKTYMSISPLKYRKTLNGITYKN 292 Query: 279 PTTPE 283 TPE Sbjct: 293 KITPE 297 >UniRef50_C6D151 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D151_PAESJ Length = 545 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%) Query: 127 QTLNEMQMQPQEQQTA-----------------RLIV-ASLLSHCRDLLGSQIQTASRSQ 168 Q L E+ MQ +E ++A RLI+ A LL+ C + +G + + Sbjct: 384 QLLLELNMQSEELESAEAAVWESLLDRETLGEMRLILEAYLLAAC-ERIGEK--RTGKVA 440 Query: 169 ALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 L E +R ID Y++ +LT + + +++P Y+S L+++ EY+ R+E AK Sbjct: 441 NLVERVRAIIDRDYSNGSLTVTDIGREVFLTPTYVSLLYKQETGQTVGEYMTQVRMEKAK 500 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +L+ K ++ +A G+ D +YF +LF+K T +PS YR +Y Sbjct: 501 EMLRDPQYKFYDICYAIGYTDPSYFTKLFKKMTGVTPSGYREKY 544 >UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5Z2_9FIRM Length = 533 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRD---------------YIDERYASALTRES 190 + +L++ R L Q + +F+ + D YI E Y +T E+ Sbjct: 393 IKKILNYSRTLEDYQKNLEHKFDQMFKILADDAEKQNFRPLRKAIKYIKENYDKQITAET 452 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A+ +SP Y SHLF+K +Y+ R+E AK +L D + E+A A GF D Sbjct: 453 LAEVVNLSPVYFSHLFKKQTGKNMTDYITEYRMEIAKKMLFDTDKTIFEIAVAVGFQDQR 512 Query: 251 YFCRLFRKNTERSPSEYRR 269 YF + F++ ++PSEYR+ Sbjct: 513 YFSKRFKQIVGKTPSEYRK 531 >UniRef50_C6CT83 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT83_PAESJ Length = 472 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 A ++ HCR +T +R+ F I Y+ + + L+ + +++ F+++P+Y+S LF Sbjct: 349 ALVVRHCRGGEAHPPETKNRT---FNQILQYVTDHFREELSLQGLSEQFFMNPSYISQLF 405 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLL-KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 +K F Y++ R+ HA LL + D + E+A G+ D YF RLF+K T ++P+ Sbjct: 406 KKEVGETFVGYISQLRIAHACKLLDENDDYSIHEIAEKIGYNDYFYFARLFKKMTGKTPT 465 Query: 266 EYRRQ 270 +YR + Sbjct: 466 QYRSE 470 >UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 Tax=Clostridiales RepID=C7GA03_9FIRM Length = 276 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 62/116 (53%) Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 R A+ E IR YID Y ++ +SVA+ S Y +F++ F YL RLE Sbjct: 157 RMSAVAENIRQYIDMHYKEDISLQSVAEEMNYSDAYFCKIFKQCFDKSFIGYLTEYRLER 216 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 AK LL + VK+++ G+ DSNYF ++F++ +P+EYR + Q+ + T Sbjct: 217 AKQLLADVRINVKDISVNVGYRDSNYFTKVFKRAMGSTPTEYRMEILKQMNKGNTA 272 >UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=A1RF43_SHESW Length = 293 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 63/111 (56%) Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 +++T R QA E I ++I++ ++ L E +A +S Y S F++ GF YL Sbjct: 177 KLETLGRHQATMEMILNHINQNFSDNLNLEQMASKANLSMFYFSRTFKELTGTGFTAYLI 236 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + R+ A LL+ + ++++A + G+ D +YF RLF+K RSPSE+R Sbjct: 237 NKRMTEAHCLLEQTNWSIEKIARSVGYNDVHYFSRLFKKTFNRSPSEFRNH 287 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 8/126 (6%) Query: 148 SLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 +L++ R+L G RS+ + IR YI Y + +A F++SP YLS F Sbjct: 364 ALVTKVRELTG-------RSEIVDNVIR-YIKNHYKEDINLNVLANEFFLSPAYLSRKFS 415 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 +T + YL R+ A LLKG + + E+A G+ D+NYF ++F+K +P E+ Sbjct: 416 QTTGVSIMSYLEDYRINVATDLLKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEF 475 Query: 268 RRQYHS 273 R+ S Sbjct: 476 RKMSKS 481 >UniRef50_UPI0001C34E1E two component AraC family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E1E Length = 534 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Query: 162 QTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 +T S AIR YI++ Y++A L+ S + +SPNYLS L +K F +YL Sbjct: 418 KTKSSMDICDRAIR-YIEDNYSNADLSLMSASTEIGVSPNYLSALIKKRTGNSFVDYLTK 476 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+E AK LL +K++EV+ ACG+ D +YF F+K SP+ RRQ Sbjct: 477 KRMETAKILLLNTAMKIREVSEACGYNDQHYFSYCFKKYEGVSPNMLRRQ 526 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 8/178 (4%) Query: 112 QHVARRGPRIGSFL-LQTLNEMQMQPQEQQTARLIVASL------LSHCRDLLGSQIQTA 164 Q VA+ RI L + NE+ +Q ++ + L+ + + D+L ++ Sbjct: 177 QEVAKAVVRISEELGITDTNELVVQMEKLKIKYLLYNNKHDAYNEIIKMVDILFDKMNIK 236 Query: 165 SR-SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 + S+ +A+ DYI+ ++ E VA IS YLS +F+K + F Y+ ++ Sbjct: 237 GKLSEGGMKAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKM 296 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 + AK +L D+ V +A + ++NYF + F+K T +PSEYR +Y ++ E+ T Sbjct: 297 DLAKEMLVNTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREKYRNRKEEENET 354 >UniRef50_C5EE52 Two-component response regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE52_9FIRM Length = 529 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 5/128 (3%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQ-ALFEAIRDYIDERY-ASALTRESVAQAFYISPNYL 202 IVA L+ RD+ +T + S+ L YI Y S L+ VA+ ++SP YL Sbjct: 401 IVADLI---RDICAGVNETQADSKTVLAHKAETYIRNNYPDSELSLNDVAEELHVSPVYL 457 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S LF+K + F+++L+ R+E A+ L++ LK E+ G+V++NYF LF++ Sbjct: 458 SILFKKIKQVTFSDFLSEIRMEAARELVEHTSLKTYEIGERVGYVNANYFSCLFKRRYHV 517 Query: 263 SPSEYRRQ 270 S SEYR+Q Sbjct: 518 SVSEYRKQ 525 >UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=Bacillaceae RepID=Q638V4_BACCZ Length = 275 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 31/286 (10%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M DV+ L L N P + +Y + N VP FP L G +F G Sbjct: 1 MKLDVNELAEYLANNPFRVEGVYRYAKNPGVPCAESTDSFPGFVFPLAGKTQFQFNGTPY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQW----DGKQYQNLAKQH- 113 L PG V++ GG A T + G+ + +V + ++ QH Sbjct: 61 ILSPGKVIH---GG-------AKMTLAHKMLGEINWEYILVLYRISNSEREDSGFTHQHF 110 Query: 114 --VARRGPRIGSFLLQTLN------EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS 165 + + PR+ L++ + + M E + +LLS + Sbjct: 111 ELLTGQSPRLVEVLMRLWDVYNQRGGISMLQTEMLFREALNEALLSVANR------ENDY 164 Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 S LFE I Y+ E Y +T ++ + ++ N LS++F+K +G EYL + R++ Sbjct: 165 ESHTLFERISSYVREYYYKDITIHTLTEQNNVNRNRLSYVFRKHAGMGPAEYLLNYRIKM 224 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A+ +L + V+++A A G D YF R+F+K SP++YR ++ Sbjct: 225 AQKMLCTSGVSVQQIAQAVGIADPFYFSRVFKKRVGISPTKYREKF 270 >UniRef50_B4AP12 Periplasmic binding protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AP12_BACPU Length = 527 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + I YI E Y LTR+ +A + +Y S F+K+ + +Y+ R++ AK LL Sbjct: 161 IQMILQYIAEHYQQELTRKDLAHKMGFNESYFSTFFKKSVGMSVTDYIAQIRIDEAKKLL 220 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 D +V+ +A G+ DS YF R FR+ T RSPS+YR Sbjct: 221 FKTDEQVQAIAQRVGYTDSLYFSRKFRQKTGRSPSQYR 258 >UniRef50_C6D427 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D427_PAESJ Length = 530 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 63/106 (59%) Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 A + +++ + I+ YI Y LTR S+A+ Y+ P+YL+ LF+K + Y+ R+ Sbjct: 423 AEQPKSVADDIKQYIHAHYGEDLTRISLAEIVYLHPDYLARLFKKETGVSLGTYVISARM 482 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 E AK LL+ +L V VA G+ + +YF ++F++ +P+EY++ Sbjct: 483 EAAKQLLRTTNLSVFAVAKKVGYANYSYFAKVFKQEAGVTPNEYKQ 528 >UniRef50_C6VNG3 Response regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNG3_LACPJ Length = 486 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 A+R I +RY L+ +VA +++ YL LF++ F ++LN R++ A LL+ Sbjct: 384 AMRQIIKKRYPEQLSLAAVASELHLNAVYLGQLFKQEVGRSFAQFLNDYRVDVAVDLLRD 443 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 DL + ++A A G+ +S+YF +LF+K T SP +YR+ Sbjct: 444 SDLDIGQIAEAVGYQNSSYFYKLFKKQTGMSPGDYRK 480 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 88 LFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG--SFLLQTLNEMQMQPQEQQTARLI 145 LFG+ L + V++ L + +A I + Q LN Q E + Sbjct: 338 LFGENNLKYKVIKL---IIMLLLETGIATSDESIDVEKLISQILNSSYEQIVE--IFKKA 392 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 V SL S + I S ++A+ ++I++ Y+ +T ++ F +P Y S L Sbjct: 393 VLSLFSKAKTKHEQIINNDSINKAI-----EFINQNYSEEITLSQISSTFNFNPYYFSKL 447 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K + F YL R++ A LLK +KE++ A GF D NYF + F+K T +PS Sbjct: 448 FKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPS 507 Query: 266 EYR 268 +R Sbjct: 508 AFR 510 >UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2F4_CLOB8 Length = 531 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 154 RDLLGSQIQT-ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 RD + +QT S + + YI++ ++ S+A+ Y++P Y S LF+ + Sbjct: 398 RDFIIQILQTDIGESHEIIRKAKQYINDHLNEDISVYSIAEMLYLTPTYFSKLFKHSTGE 457 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 G N Y+ R++ AK+LL+ +K ++A G+ D+NYF F+K T SP+E+R + Sbjct: 458 GCNNYIIRKRIQKAKSLLETTSMKTGKIATLVGYKDTNYFSLAFKKQTGMSPTEFREK 515 >UniRef50_C6CXB6 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXB6_PAESJ Length = 245 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 51/92 (55%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 Y++E YA + A +++ Y S LF+K + F YL R+E +K LL + LK Sbjct: 149 YLEEHYAEDIDLNKAASLVFMNSTYFSSLFKKMTGVSFIHYLQKIRVEESKKLLLNHQLK 208 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + EVA GF D YF R+F+ T +P+E+R Sbjct: 209 IYEVAEKVGFSDEKYFFRVFKNTTGLTPNEFR 240 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%) Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 R+ +L + YI+ ++ LT E VA+ Y+SP Y S LF++ + F +YL RL+ Sbjct: 434 RNSSLIDRASKYIEANFSQDLTLEEVARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKA 493 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 A+ LL L V E+A G+ D+ YF ++F+K +PS +R+ Sbjct: 494 ARELLLNTKLPVAEIATRVGYRDARYFGQVFKKQEGYTPSVFRK 537 >UniRef50_A7B6I0 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I0_RUMGN Length = 311 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 4/134 (2%) Query: 143 RLIVASLLSHCR--DLLGSQIQ-TASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 ++V +L C ++ G ++ T R+ L E IR YI+E A +T +A+ +S Sbjct: 142 NIMVHDILQSCAYYEMYGDKLALTTKRNSQLSEIIR-YIEEHSAERVTLSDLAKHMQLSA 200 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 +YLSH QK F+E+L +TR +AK LL +L + ++ + CGF D Y F+K Sbjct: 201 SYLSHFIQKNLHRSFSEFLTYTRYLNAKALLMKGELSLIDICYGCGFSDYRYMNNAFKKY 260 Query: 260 TERSPSEYRRQYHS 273 T ++P+E+++ +S Sbjct: 261 TGQTPNEFKKNMNS 274 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 143 RLIVASLLSHCRDLLGSQIQTASRSQAL--FEAIRDYIDERYASALTRESVAQAFYISPN 200 +LIV L SH D + S+ + R +L FE I D I+E+Y +T + +A +S + Sbjct: 156 QLIVLLLRSHI-DKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVNLSAH 214 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 + F++ +++N RL+ A LK DL + E+A CGF NYF RLF++N Sbjct: 215 HFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKRNY 274 Query: 261 ERSPSEYRRQY 271 SP++YR ++ Sbjct: 275 NISPTKYRNEH 285 >UniRef50_C6CV07 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV07_PAESJ Length = 529 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 59/112 (52%) Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 I + S+ + E I+ YI L+R+ +A +SP+Y+ LF+K + ++Y+ Sbjct: 409 DHINKVAASETIIEKIKRYIALNLDQELSRQYIADYVGLSPDYIVKLFKKETGLSVSDYI 468 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+ AK LL D V VA A GF + +YF LF+K +P EYRR+ Sbjct: 469 LTERINLAKELLAKTDTTVSNVALAVGFCNFSYFSTLFKKEVTMTPQEYRRE 520 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 16/160 (10%) Query: 124 FLLQTLNEMQMQPQEQQ--------------TARLIVASLLSHCRDLLGSQIQTASRSQA 169 FL++T + Q+ Q QQ ++ + +LL H L+ ++++ + Sbjct: 110 FLIKTGHNTQIITQVQQLVESYSFPGNMAVFKSKTLFMNLLEHI--LIAAKVKVLDNANE 167 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L E YI E YA ++ +++ F I ++LF++ + ++Y+ R+ AK L Sbjct: 168 LMEQALQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDL 227 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L+ + V E+A G+VD YF R+F+K T SPS YR+ Sbjct: 228 LEYGGIPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_A8R814 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R814_9FIRM Length = 498 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%) Query: 155 DLLGSQIQTASRSQAL--FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 D+L I +AS +Q + ++ YI+E Y +T +VA+ I+P YLS L K G Sbjct: 377 DMLQKSIHSASYTQNVSSYKKALTYIEENYHKPITLVTVAEHLSITPFYLSRLINKHGKE 436 Query: 213 GFNEYLNHTRLEHAKTLL-KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 F E +N R++ AK L+ +GY KE+ + GF +YF ++F+K + SP EY+ ++ Sbjct: 437 SFTEIVNFQRIKKAKQLIEEGYSF--KEITYQVGFTSQSYFTKIFKKLVQMSPGEYKSRF 494 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 18/241 (7%) Query: 42 RLEIVL----EGEF-VDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGF 96 R EI+L G F +DTG PGDVL+ +G + TT LG Sbjct: 7 RAEIILVTGGRGSFNIDTGH-YLASPGDVLFFDSGILH------DETTIDGDLATSCLGV 59 Query: 97 SVVQWDGKQYQNLAKQHVARRGPRIGSF-----LLQTLNEMQMQPQEQQTARLIVASLLS 151 S Q G++ + + A + F L T ++ + + ++L Sbjct: 60 SDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILC 119 Query: 152 HCRDLLGSQIQTASRSQ-ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 + L Q Q +L ++ YID Y ++T +S+A +P YL+H F++ Sbjct: 120 KLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHI 179 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +Y+ R+ A+ LL G D + E+A +CG+ +SNYF +F++ +P +YRR Sbjct: 180 GYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRRD 239 Query: 271 Y 271 + Sbjct: 240 W 240 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 86/214 (40%), Gaps = 37/214 (17%) Query: 72 GWNFPQWQAPATT------FSVLF--GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGS 123 G FP P F LF G Q + VQW G+ Sbjct: 81 GCRFPAGVLPVLKNLMQRDFMPLFEPGAQTALYGPVQWSGR------------------- 121 Query: 124 FLLQTLNEMQMQPQEQQTARLIVASLLSH-----CRDLLGSQIQTASRSQALFEAIRDYI 178 L L MQ E ++ +I +L+ H CR S+ Q E I Y+ Sbjct: 122 -LRTLLGMMQSAESEPESPGMIYLTLILHYVEQECR----SEKQDIRPRNETVEQICAYL 176 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 Y + VA FY+SP YLS LF++ +Y+N R+E A+ LL+ DL + Sbjct: 177 AANYQQKFSLTDVAARFYLSPYYLSRLFRRVTGQSIVDYINGRRIEAAQRLLESTDLNIS 236 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 VA GF + +F R+FR+ P +YR+ + Sbjct: 237 AVAEQTGFASAAHFRRVFRETMGTGPLQYRKSHR 270 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 59/94 (62%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI E Y+ +T ESV++A +S YLS LF+K + F +Y+N ++E AK LL+ D+ Sbjct: 252 YISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQLLENTDMS 311 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + ++ + G+ +S YF ++F+K +PS YR + Sbjct: 312 IINISMSLGYDESGYFSKVFKKVVGVTPSAYRNK 345 >UniRef50_UPI000178A110 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A110 Length = 555 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 10/146 (6%) Query: 135 QPQEQQTARL----IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 +P +Q A+L ++ ++++ C S + QAL E +++YI+E Y LT E Sbjct: 153 EPMKQWRAQLDFQELLYTMMAEC-----SPYAKNDKRQAL-ERVKEYIEEHYDEDLTIEQ 206 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A +SP Y +++KT +YL RL AK L+ G D ++EVAH G+ D Sbjct: 207 LANLSELSPKYFVEVYKKTYGHSAMDYLAGVRLNKAKQLMLGSDSLLREVAHMVGYKDEF 266 Query: 251 YFCRLFRKNTERSPSEYRRQYHSQLT 276 YF R F+K SPS Y + ++L Sbjct: 267 YFSRKFKKAFGISPSAYMKTRKNKLA 292 >UniRef50_UPI0001C36BEF two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEF Length = 533 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI + Y+ ++ E +A+ + NY S LF+K F Y+ R+E AK LL+ DL Sbjct: 437 EYIKKNYSQKISLEEMAEQGGFNMNYFSELFKKETGKTFTAYVTEVRMEEAKKLLRDTDL 496 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 V EVA A G+ DS +F + F KN P EYR+ Y+ Sbjct: 497 PVYEVAEAVGYKDSKFFSQQFVKNVGIKPMEYRKLYY 533 >UniRef50_C9S103 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C9S103_GEOSY Length = 493 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 6/126 (4%) Query: 158 GSQIQTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGAIGFNE 216 Q + +R A+ +R Y++ + +LT E VA A SP Y SHL K + F + Sbjct: 372 AKQAEEDARVDAVERGLR-YMEAHFRDPSLTLERVAAAAGRSPAYFSHLLSKKRGVTFRQ 430 Query: 217 YLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 +L + RLE AK LL+ DL +KE+A GF ++Y R+F+ ++P+ YR + Sbjct: 431 WLTNRRLEEAKRLLRQTDLSIKEIAEQTGFRTAHYLMRVFKAELNQTPTAYRDEQRL--- 487 Query: 277 EKPTTP 282 KP++P Sbjct: 488 -KPSSP 492 >UniRef50_C5D6R8 Transcriptional regulator, AraC family n=7 Tax=Bacillaceae RepID=C5D6R8_GEOSW Length = 287 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 1/148 (0%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 LLQ L E+ + ++ + ++ + L ++ S S+ + YI+ YA Sbjct: 139 LLQQLVELNEERDPDRSLKQLL-YFVEFIWQLQKQELHIPSASEKVCAEAVAYIERHYAE 197 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 +T + +AQ+ P+Y++ QKT + F +YLN+ RL AK L + ++ +A Sbjct: 198 PITIQQLAQSLRFHPDYITRCMQKTIGMSFVQYLNYYRLSKAKKWLAETNETIEAIAKRA 257 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYH 272 G D YF RLF+K +P+EYRR H Sbjct: 258 GIEDGAYFSRLFKKIEGVTPTEYRRTVH 285 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 2/107 (1%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF-QKTGAIGFNEYLNHTRLEHAKT 228 L E +YI + Y + VA IS NY S +F QKTG FNEY+N R+ A+ Sbjct: 259 LIERALEYIRQFYREPIKASEVANVVNISANYFSTIFRQKTGK-TFNEYVNLLRVNEARK 317 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 LL L+V +A+ GF + YF +F+K T +P+EYR Y+ +L Sbjct: 318 LLSETSLRVGVIANNVGFHEYKYFVEVFKKFTGMTPTEYRNLYNREL 364 >UniRef50_C6D165 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D165_PAESJ Length = 535 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 54/92 (58%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 Y++E Y A++ VA Y++PNYLS +F++ + F E+LN R+E AK LL K Sbjct: 440 YMEENYNRAVSLADVAAIVYVTPNYLSRIFKEEIGVNFVEWLNRYRIEKAKLLLSEPGAK 499 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 VA G+ D YF ++F++ + SP EY+ Sbjct: 500 TYAVAEKVGYSDYKYFSQMFKRFADCSPKEYK 531 >UniRef50_UPI0001787F48 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F48 Length = 548 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 + + S L +DYI + L+ ++ A+ F ISP Y S+LF+K I F +++ H Sbjct: 429 ERSDESTKLIYQAKDYICAHLHTNLSLDTCAKQFNISPGYFSNLFKKVLNISFQQFVIHQ 488 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 R+E AK +L D +V+E+A G+ YF +F+K+T +PSE++ Sbjct: 489 RMEKAKEMLID-DYQVQEIAQKLGYEHRRYFSEIFKKHTNMTPSEFK 534 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 23/242 (9%) Query: 45 IVLEGE-FVDTG-AGATLVPGDVLYVPAG--GWNFPQWQAPATTFSVLFGKQQLGF-SVV 99 +V EG +++ G A TL GDV +P G W + P + + +GF V Sbjct: 1 MVQEGRGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETP-------WSYRWIGFEGVS 53 Query: 100 QWDGKQYQNLAKQHVARRG---PRIGSFLLQTLNEMQM----QPQEQQTARLIVASLLSH 152 + + Q R+ ++G ++ Q L Q+ + + L+ A L++ Sbjct: 54 ARECLESAGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITD 113 Query: 153 CRDLLGSQIQTASR----SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 R L + S S E +YI+E Y+ L +A ++ +YL+ FQ+ Sbjct: 114 NRKNLAGMGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQE 173 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 EYL R+E AKTLLK D++V EVA G+ D F ++F+ T RSP EY+ Sbjct: 174 NIGCSPREYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYK 233 Query: 269 RQ 270 + Sbjct: 234 EE 235 >UniRef50_A6BDK1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDK1_9FIRM Length = 550 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 57/94 (60%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 DY Y A+ A+A ++ YLS+LF + IGF YL + R+EHAK LL+ +L Sbjct: 455 DYAARHYREAVGLGDAAEAAGVNSTYLSYLFSQEMGIGFANYLLNLRMEHAKKLLRETNL 514 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 K+ +VA GF D +YF ++F+K SP++YR+ Sbjct: 515 KMWQVAEESGFNDYHYFSKVFKKAEGMSPAQYRK 548 >UniRef50_Q04H74 Transcriptional regulator, AraC family n=3 Tax=Lactobacillales RepID=Q04H74_OENOB Length = 238 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 59/99 (59%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I+++I +S LT +A+ ++P+YL+ +F+K + +YLNH ++E A TLL Sbjct: 99 IKEWIRAHISSTLTVPGIAKQLELNPDYLTRIFKKCTGMTMLQYLNHLKIEVATTLLVRT 158 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 ++ VK+++ F DS F R F + SP+EYR+ YH Sbjct: 159 EMSVKQISSRAYFNDSKVFIRKFHQELGLSPTEYRKSYH 197 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 9/156 (5%) Query: 123 SFLLQTLNEMQMQPQEQQTA-----RLIVASLLSHCRDLLGSQIQTASRS-QALFEAIRD 176 + ++Q LN+M + +E+ + ++++ LL L S A+ S L + I D Sbjct: 127 AIIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITD 186 Query: 177 ---YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 +I YA +T + +++ FYISP YLS +F++ YLN TR+ A+ LL Sbjct: 187 VVKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDT 246 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 DLK+ ++A + GF +F R F+K + S+YR+ Sbjct: 247 DLKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_Q9KBG9 BH1958 protein n=1 Tax=Bacillus halodurans RepID=Q9KBG9_BACHD Length = 516 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L + I YIDE + + ++++Q F + P+YLS +F + I +Y+ RLE K L Sbjct: 405 LAQEIEAYIDEHFPEPINHQTLSQRFGLVPSYLSKIFSRYKGISPAKYIVKLRLEATKEL 464 Query: 230 L-KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 L + L +K++A+ GF D +Y R+F++ T SPSE+R+Q Sbjct: 465 LLENPGLTIKDIAYVVGFEDPSYLSRIFKRETGLSPSEFRKQ 506 >UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3C3_9BACL Length = 295 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%) Query: 139 QQTARLI-VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 Q R I +A +L + LGS ++ + E +R ID YAS L+ S A A ++ Sbjct: 154 QLYGRFIELAVMLERHLERLGSSSAAEPENRMMEEVLRR-IDTDYASRLSARSFAAATHL 212 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S + LF++ F++Y+ + R+E ++ LL L V E+ + G+ D +F LF+ Sbjct: 213 SERHFHRLFRQYAGCTFHDYVRNKRMERSRELLASTRLPVMEIMRSVGYADKKHFLSLFK 272 Query: 258 KNTERSPSEYRRQ 270 ++T SP+EYRRQ Sbjct: 273 QSTGVSPTEYRRQ 285 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 2/163 (1%) Query: 115 ARRGPRIGSFLLQTLNEMQMQPQE-QQTARLIVASLLSHCRDLLGSQIQTASRSQ-ALFE 172 +R P I + + ++E ++ + +R ++ S++ R + +Q S L E Sbjct: 113 SRVFPEIEALMKMIVDESSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAE 172 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 I+DYID + ++ + + + F+++P Y+SH+F+ I Y H R+ A LL Sbjct: 173 QIKDYIDRNFTQNISLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVT 232 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 ++KV EVA G+ + NYF +FR+ T SP+ +R L Sbjct: 233 TEMKVWEVAKLLGYDNPNYFSIIFRRVTGLSPNRFRESNQQNL 275 >UniRef50_UPI0001C36345 two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36345 Length = 412 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 60/99 (60%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 L + + ++ID S L+ ++A F ++P+YLS LF+K ++ Y+N R++ A Sbjct: 305 LVQKVVNHIDLNLVSDLSLRNLAAEFNVNPSYLSSLFKKEMSVTITAYVNQQRMKQAIRY 364 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L +++++ +A G D NYF +LF++ T ++PSEYR Sbjct: 365 LNTTNMQIQNIAADVGISDVNYFSKLFKRATGKTPSEYR 403 >UniRef50_A9KTC8 Two component transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KTC8_CLOPH Length = 253 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 55/96 (57%) Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +Y++E Y LT V+ I+ YLS LF + GF EYLN R++HA + L+ Sbjct: 148 EYMEEYYHKNLTLIEVSNKVGITAGYLSTLFTQNMNCGFVEYLNKIRIKHACSYLEQNYF 207 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 K E+A+ GF D YF ++F+K T +P EYRR + Sbjct: 208 KTYEIAYKVGFKDEKYFSKVFKKETGITPYEYRRDH 243 >UniRef50_UPI0001C34E2F two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E2F Length = 583 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 2/135 (1%) Query: 146 VASLLSHCRDLLG--SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + S + C +L+ S + + R + + I+ I E S ++R +A+ ++P+Y++ Sbjct: 448 MCSWIRRCMELMNRLSFPEGSGRGEEMAGRIKGLIKENLKSGISRREIAEKLNLNPDYVN 507 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 LF+ + EY R++ A+ LLK DL V VA G+ + ++F R+FRK T + Sbjct: 508 RLFKSETGMTVKEYAIKKRMKQAEHLLKHSDLAVSAVAAEVGYDNFSHFIRMFRKETGYT 567 Query: 264 PSEYRRQYHSQLTEK 278 P +YR+++ EK Sbjct: 568 PKQYRKKFREINVEK 582 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 55/96 (57%) Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 + YI++ A LT VA+A S Y +F+K + F EY++ R+E AK LL + Sbjct: 228 KRYIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPN 287 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 L+V EVA GF +F R+F+K +SP+EYR Q Sbjct: 288 LRVSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQ 323 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 6/139 (4%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTA--SRSQALFEAIRDYIDERYASALTRESV 191 + QE + + +C D +IQ SR + + + YI+ YA+ + + Sbjct: 371 LNMQESNNIEKSLIEFVHYCID----KIQNVKESRHKKIIKDAITYIERNYANQIFLSDI 426 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +SPNY +F++ F ++LN R+ AK LL +LK EVA GF D Y Sbjct: 427 AEVCGVSPNYFCKIFKEETGKSFVDFLNELRINKAKELLLSTNLKSYEVAEKVGFNDYKY 486 Query: 252 FCRLFRKNTERSPSEYRRQ 270 F +F+K T SPS+++ + Sbjct: 487 FSMIFKKYTGTSPSKFKEE 505 >UniRef50_D1N8N1 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8N1_9BACT Length = 301 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%) Query: 162 QTASRSQALFEAIRDYIDERYASALTR-ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 QT + F+A ++ ID RY R VA F I+ N+L+ LF + +Y+ Sbjct: 183 QTPESGKLFFKA-KNLIDARYLDGGLRVAGVAAEFQITANHLTKLFHAALGMSVMDYIQT 241 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 R+++++ LL +L V+EVA A GF D NYF R F++ T +PS +RR++ Sbjct: 242 RRVDYSRKLLLESNLTVREVAFASGFNDPNYFTRFFQQKTGMTPSRFRREWE 293 >UniRef50_UPI0001788EF7 two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=UPI0001788EF7 Length = 516 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 54/94 (57%) Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 + Y L+ ++++Q + PNYL LFQ+ F++YLN R+E A LL D K Sbjct: 421 VQHHYPEELSLKTLSQRLQMHPNYLGQLFQQEVGASFSDYLNQYRIEKATQLLLHTDQKT 480 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 ++A + G+ DS+YF R F+K T SP+E R Y Sbjct: 481 ADIAFSVGYTDSSYFYRQFKKYTGVSPTEMRSMY 514 >UniRef50_B0MFL4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL4_9FIRM Length = 531 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI E + + + VA A ++ YLS+LF++ IGF+ +L R+E+AK LLK K Sbjct: 437 YIREHFKEQIGLQEVADAVGLNFAYLSYLFKQEMGIGFSGFLLELRVEYAKDLLKNTSYK 496 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +K+VA GF D +YF + F++ SP+EYRR++ Sbjct: 497 IKDVAVESGFNDYHYFSKAFKRLNGVSPAEYRRKF 531 >UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=Cyanobacteria RepID=B7K731_CYAP7 Length = 309 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 67/131 (51%) Query: 138 EQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 E T L + L +C + + + S I DYI++ A + ++++ I Sbjct: 173 ESLTNALAINLLRDYCVTKISLNLYSGGLSDGQLLLITDYINDNLAGEIKLSNLSELIGI 232 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S + S LF++T I ++YL R+E AK LLK L V EVA +CGF ++F + FR Sbjct: 233 SQFHFSRLFKQTVGISPHQYLMRQRIERAKLLLKNSPLSVVEVALSCGFSSHSHFGKYFR 292 Query: 258 KNTERSPSEYR 268 + T +P EYR Sbjct: 293 QITGLTPKEYR 303 >UniRef50_UPI0001C35B7C two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B7C Length = 411 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 59/101 (58%) Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + + + + I+ S L + +++ F+IS NYLS LF+K I +Y+N R+E A Sbjct: 306 VIQKVINQINLNLTSDLGLKDLSEMFHISANYLSSLFKKEMGITLTDYVNKRRVEQAVFY 365 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 L D++++ +A CG D NYF R+F+K +PS++R Q Sbjct: 366 LNTTDMQIQTIASYCGIQDINYFTRIFKKFIGMTPSKFREQ 406 >UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES65_OCEIH Length = 517 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 12/132 (9%) Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 +Q LI+ L H + I+ A R YI+E + + + + VA +S Sbjct: 392 EQDLELIMKKLAHHKLEKADWLIKQAER----------YINEYFRTTIKVQEVADVINVS 441 Query: 199 PNYLSHLF-QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 NY S LF QKTG FNEY+N R+E AK+LL KV E++ GF + YF +F+ Sbjct: 442 SNYFSTLFKQKTGE-NFNEYVNKLRVEEAKSLLINTPFKVSEISIQVGFQEYKYFVSVFK 500 Query: 258 KNTERSPSEYRR 269 K + +P+ YR+ Sbjct: 501 KFSGLTPTNYRK 512 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 56/98 (57%) Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I++YI E Y+ +T +A +++P YLS +F+K +YL R++ AK +L+ Sbjct: 434 IKEYIGEHYSENITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLIDVRIDKAKEMLRNP 493 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + + E+A G+ D +F +LF K T P+EYRR Y Sbjct: 494 ERTIGEIACMVGYQDERHFSKLFSKMTGVKPTEYRRFY 531 >UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3A6_9CLOT Length = 505 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 53/92 (57%) Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ Y L+ E +A + ++P YLS LF + I F Y R+E AK LL + K+ Sbjct: 411 IDQGYKGELSLEEIAGSLSVTPEYLSTLFIRELGIKFTTYCTQRRIECAKHLLADPNRKI 470 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EVA G+ D YFC++F+K T SP EY++ Sbjct: 471 YEVAGESGYGDVKYFCKVFKKYTGLSPGEYQK 502 >UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 Tax=Enterococcus faecium RepID=C9BAM1_ENTFC Length = 483 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%) Query: 120 RIGSFLL-----QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 R SFLL + L +++ + Q ++ A + + LL S I+ R + + + Sbjct: 321 RYSSFLLFMEIQRELIDLEDEEYLQGIEKIHQAKTVQELQQLLLSFIKKHQRQKKYSDNV 380 Query: 175 RDYI---DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 I + Y LT + V++ +++ YL LF+K F+ YLNH R+E AK LL Sbjct: 381 EKVIVILHQHYQEPLTLKEVSENLHLNVMYLGQLFKKETKKSFSAYLNHLRMEKAKQLLL 440 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + + E+A G+ ++ YF +LF+K RSP EYR Sbjct: 441 HSNQNINEIASEIGYNNTTYFSKLFKKIVGRSPKEYR 477 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 + + + IV+ LL R+ S + +IR+YI++ Y +L +A+ + ++ Sbjct: 3 KDSLKKIVSRLLDGVRN---------KESADVIISIREYIEKNYDDSLNVADLARKYGLN 53 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 +YLS LF++ I Y+ R+E A LL+ + KV EVA G+ +S YF R+F+K Sbjct: 54 VSYLSTLFKERTGINITSYIEGIRMEKAMNLLRETNWKVTEVAFHVGYSNSGYFSRVFKK 113 Query: 259 NTERSPSEY 267 T +P EY Sbjct: 114 YTGVTPGEY 122 >UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAS3_9FIRM Length = 271 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 63/107 (58%) Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 + R+ + + +R Y+++ Y + L+ +SV++ +ISP YLS F+K + F + L R+ Sbjct: 155 SDRNALVMDHVRKYMEDNYMADLSLDSVSEILHISPAYLSAQFKKYQKMNFLDCLTELRI 214 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LL EVA G+ D++YF R F+K T +P++YR++ Sbjct: 215 NAAKELLADPFRSAAEVASMVGYEDASYFARAFKKRTGMTPTQYRKE 261 >UniRef50_C4G7K2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7K2_ABIDE Length = 357 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Query: 149 LLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQ 207 LL C L+ Q + + + E++++Y+ Y+ L E++A S Y+ +F Sbjct: 221 LLRECTKLMERQERMEENAVSFTESVKEYVLRNYSDENLGVETLAAEMGFSAGYIGRIFA 280 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + + E++ TR+ AK LL+ V +A+ CGF D+NYF ++FRK SP E+ Sbjct: 281 RDVGVSLQEFIIQTRMHEAKRLLRETRDTVAVIANRCGFSDANYFSKVFRKRCGSSPKEF 340 Query: 268 R 268 R Sbjct: 341 R 341 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 4/131 (3%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + AR I+ + C +++Q A +S+ + A+ +YI+ YA L+ E VA + Y++P Sbjct: 374 EEARRIMEAFAGQCH---LTELQNAPKSKNIQLAV-EYINAHYAEQLSLEQVAASVYLNP 429 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 +Y S F+ F YL RL + LL+ L+V+ +A G+ +++YF +F+K Sbjct: 430 DYFSRAFKMETGQTFVNYLTDVRLSRSVWLLENTALRVQMIAQQVGYYNASYFSTIFKKK 489 Query: 260 TERSPSEYRRQ 270 SP EYRR+ Sbjct: 490 YGMSPYEYRRK 500 >UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R3_9FIRM Length = 509 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%) Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 ++A S LF Q F+ D +N+ Q + S ++E ++ Sbjct: 315 NFKAAKDVVSTLFSNLQSNFT----DEASVKNICTQIYLISYRLVMSTYNLPMDEKYVKM 370 Query: 137 QEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 + + + S++S + L Q+ Q+ + + E +YI E L+ E +AQ Sbjct: 371 LTESSDIFQLKSIVSDMINDLQIQLTQSVKKYSSFIEESLNYIKEHLEDDLSLEQIAQHI 430 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 +I+ +Y S F+K Y+N+ R+ AK LL +LK E++ A G D YF L Sbjct: 431 HINESYFSRTFKKECGNSVISYINNLRINKAKELLATSNLKTFEISEAVGIHDPAYFSVL 490 Query: 256 FRKNTERSPSEYRRQY 271 F+KNT SP YR Q+ Sbjct: 491 FKKNTGMSPKAYRDQF 506 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 53/94 (56%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+ Y L+ +A F++SP YLSHLF + + Y+N R+E A LL+ +L Sbjct: 189 YINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELP 248 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 V E+A+ G+ +F R+F+K SP YRR+ Sbjct: 249 VTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRRE 282 >UniRef50_A9KL59 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KL59_CLOPH Length = 259 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 54/98 (55%) Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YIDE Y + VA+ Y+S +LS L + F+E LN+ R+E AK LL L+ Sbjct: 162 YIDENYQQKIMLSEVAEHIYVSQWHLSKLLHRHTGQNFSEILNNVRIEKAKELLNNPALR 221 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 + EVA GFVD +F R+F+K S +E+R S+ Sbjct: 222 IGEVAEKVGFVDMAHFSRVFKKIVGISANEFRNTVLSK 259 >UniRef50_B1QT82 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QT82_CLOBU Length = 359 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 57/102 (55%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S + I DYI S L + +A+ FY++ YLS+ F +IGF +Y+ ++ A Sbjct: 249 SDGMINNICDYILNNIDSDLKLKFLAKEFYVNSTYLSNTFAIKTSIGFRDYITIVKMARA 308 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + L LK EVAH GF D NYF +LF++ ++PS+Y+ Sbjct: 309 EYLFVNTKLKTYEVAHKLGFRDINYFSKLFKRYYGKNPSQYK 350 >UniRef50_C0EGK3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGK3_9CLOT Length = 519 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Query: 174 IRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 I+DYI + YA S L+ +++ A +S ++L +F++ + N+YL R+E AK L+ Sbjct: 419 IKDYISKHYADSLLSVKTIGDAVSMSASHLCVVFKRETGVTVNQYLTDLRIERAKQYLQE 478 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 L E+ G+ D++YF R+FRK ++P+EYR +++ Sbjct: 479 TTLSAAEIGARVGYKDNSYFGRIFRKTVGKTPNEYREEWN 518 >UniRef50_Q03HR1 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HR1_PEDPA Length = 282 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 57/105 (54%) Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 S + +R++I + S+A F + +YLS ++K IG + +N R+ A Sbjct: 170 SNLYLQPVREFIRINCFEDIDLGSIATHFNYNKSYLSRKYKKVMGIGIKQQINKFRISRA 229 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + LL L V+E++ GF D YF RLFRKNT +PSEYR+ Y Sbjct: 230 EYLLSNTSLTVQEISSQIGFNDEKYFMRLFRKNTNSTPSEYRKLY 274 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 421 e-116 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 417 e-115 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 345 9e-94 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 298 2e-79 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 280 4e-74 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 257 3e-67 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 250 3e-65 UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 247 4e-64 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 246 5e-64 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 240 4e-62 UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=P... 236 5e-61 UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=T... 220 5e-56 UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family ... 214 3e-54 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 200 6e-50 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 199 7e-50 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 195 1e-48 UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-... 193 4e-48 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 192 9e-48 UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=... 192 1e-47 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 190 4e-47 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 187 5e-46 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 183 5e-45 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 181 2e-44 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 179 1e-43 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 177 4e-43 UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera a... 176 6e-43 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 175 1e-42 UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=V... 173 5e-42 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 173 8e-42 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 170 4e-41 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 170 6e-41 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 170 6e-41 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 169 1e-40 UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacte... 168 2e-40 UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 ... 168 2e-40 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 168 2e-40 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 168 2e-40 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 167 3e-40 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 167 4e-40 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 166 5e-40 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 166 7e-40 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 166 7e-40 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 165 1e-39 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 165 1e-39 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 165 2e-39 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 165 2e-39 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_B9MP59 Two component transcriptional regulator, AraC fa... 165 2e-39 UniRef50_C6CXK7 Two component transcriptional regulator, AraC fa... 164 3e-39 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 164 3e-39 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 164 4e-39 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 163 4e-39 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 163 5e-39 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 163 5e-39 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 163 6e-39 UniRef50_A3DK80 Two component transcriptional regulator, AraC fa... 163 6e-39 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 163 7e-39 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 163 7e-39 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 162 1e-38 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 162 1e-38 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 162 1e-38 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 162 1e-38 UniRef50_C6CT83 Two component transcriptional regulator, AraC fa... 161 2e-38 UniRef50_A6NTA8 Putative uncharacterized protein n=1 Tax=Bactero... 161 2e-38 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 161 2e-38 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 161 2e-38 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 161 2e-38 UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-... 161 2e-38 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 161 2e-38 UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostri... 161 3e-38 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 161 3e-38 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 160 4e-38 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 160 4e-38 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 4e-38 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 160 5e-38 UniRef50_C6LB63 Putative response regulator receiver domain prot... 159 8e-38 UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=... 159 9e-38 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 159 1e-37 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 158 1e-37 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 158 1e-37 UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. ora... 158 2e-37 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 158 2e-37 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 158 2e-37 UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. ora... 158 2e-37 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 158 2e-37 UniRef50_A4XMG0 Two component transcriptional regulator, AraC fa... 158 2e-37 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 158 2e-37 UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_UPI0001C3678C two component transcriptional regulator, ... 158 2e-37 UniRef50_C9A517 Helix-turn-helix domain-containing protein n=3 T... 158 2e-37 UniRef50_C6CWF4 Two component transcriptional regulator, AraC fa... 158 3e-37 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 157 3e-37 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 157 3e-37 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 157 3e-37 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 157 3e-37 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 157 4e-37 UniRef50_UPI0001C35FBC two component transcriptional regulator, ... 157 4e-37 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 157 4e-37 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 157 4e-37 UniRef50_UPI000178A16B two component transcriptional regulator, ... 157 4e-37 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 156 6e-37 UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=... 156 6e-37 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 156 6e-37 UniRef50_UPI000178A190 two component transcriptional regulator, ... 156 6e-37 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 156 7e-37 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 156 7e-37 UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. ora... 156 7e-37 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens ... 156 1e-36 UniRef50_UPI0001788F00 two component transcriptional regulator, ... 155 1e-36 UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostri... 155 1e-36 UniRef50_C6IWJ3 Response regulator n=2 Tax=Bacillales RepID=C6IW... 155 1e-36 UniRef50_C6CXU8 Two component transcriptional regulator, AraC fa... 155 1e-36 UniRef50_C6D4A8 Two component transcriptional regulator, AraC fa... 155 2e-36 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 155 2e-36 UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 ... 155 2e-36 UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=P... 155 2e-36 UniRef50_UPI0001788C2F two component transcriptional regulator, ... 154 3e-36 UniRef50_C6CWB0 Two component transcriptional regulator, AraC fa... 154 3e-36 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 154 3e-36 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 154 3e-36 UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=... 154 3e-36 UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostri... 154 4e-36 UniRef50_C6D416 Two component transcriptional regulator, AraC fa... 153 4e-36 UniRef50_UPI0001C36BEF two component AraC family transcriptional... 153 4e-36 UniRef50_C6D659 Two component transcriptional regulator, AraC fa... 153 5e-36 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 153 5e-36 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 153 5e-36 UniRef50_C6CWQ4 Two component transcriptional regulator, AraC fa... 153 5e-36 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 153 5e-36 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 153 5e-36 UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecali... 153 5e-36 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 153 5e-36 UniRef50_D2EJS9 Transcriptional regulator n=1 Tax=Pediococcus ac... 153 5e-36 UniRef50_C6CV61 Two component transcriptional regulator, AraC fa... 153 6e-36 UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 T... 153 7e-36 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 153 7e-36 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 153 7e-36 UniRef50_UPI0001789664 transcriptional regulator, AraC family n=... 153 8e-36 UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia... 153 8e-36 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 153 8e-36 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 153 8e-36 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 153 9e-36 UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantell... 153 9e-36 UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostri... 153 9e-36 UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=... 153 9e-36 UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecali... 153 9e-36 UniRef50_B1YJP0 Two component transcriptional regulator, AraC fa... 152 9e-36 UniRef50_UPI0001787D2D two component transcriptional regulator, ... 152 1e-35 UniRef50_B0S295 Transcriptional regulator AraC family n=2 Tax=Fi... 152 1e-35 UniRef50_C6CZ56 Two component transcriptional regulator, AraC fa... 152 1e-35 UniRef50_C6CTB8 Two component transcriptional regulator, AraC fa... 152 1e-35 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 152 1e-35 UniRef50_UPI00017899D9 two component transcriptional regulator, ... 152 1e-35 UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 ... 152 2e-35 UniRef50_C6PWF1 Transcriptional regulator, AraC family n=1 Tax=C... 152 2e-35 UniRef50_B8HZZ5 Two component transcriptional regulator, AraC fa... 151 2e-35 UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=C... 151 2e-35 UniRef50_UPI0001C368F3 two component transcriptional regulator, ... 151 2e-35 UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 T... 151 2e-35 UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecali... 151 2e-35 UniRef50_UPI0001788EC5 two component transcriptional regulator, ... 151 2e-35 UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillu... 151 2e-35 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 151 2e-35 UniRef50_UPI0001789951 two component transcriptional regulator, ... 151 2e-35 UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepI... 151 3e-35 UniRef50_D1PQV2 Putative two-component response regulator n=1 Ta... 151 3e-35 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 151 3e-35 UniRef50_C6CY25 Two component transcriptional regulator, AraC fa... 151 3e-35 UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=G... 151 3e-35 UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=... 151 3e-35 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 151 3e-35 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 151 3e-35 UniRef50_A1HM14 Two component transcriptional regulator, AraC fa... 151 3e-35 UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 T... 151 3e-35 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 151 3e-35 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 151 3e-35 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 151 4e-35 UniRef50_UPI0001C36B1C two component transcriptional regulator, ... 150 4e-35 UniRef50_B8I3I7 Two component transcriptional regulator, AraC fa... 150 4e-35 UniRef50_C6D078 Two component transcriptional regulator, AraC fa... 150 4e-35 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 150 4e-35 UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protei... 150 4e-35 UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Rumi... 150 5e-35 UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostri... 150 5e-35 UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostri... 150 5e-35 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 150 5e-35 UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bactero... 150 5e-35 UniRef50_A5N028 Transcriptional regulator n=12 Tax=Clostridiales... 150 5e-35 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 150 6e-35 UniRef50_UPI0001C36A4D two component transcriptional regulator, ... 150 6e-35 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 150 6e-35 Sequences not found previously or not previously below threshold: UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 177 3e-43 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 168 1e-40 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 167 3e-40 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 164 3e-39 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 163 6e-39 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 161 2e-38 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 161 2e-38 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 160 4e-38 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 4e-38 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 160 5e-38 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 157 4e-37 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 156 6e-37 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 156 6e-37 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 156 7e-37 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 156 8e-37 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 156 9e-37 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 156 1e-36 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 155 1e-36 UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=... 155 1e-36 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 155 1e-36 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 155 2e-36 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 155 2e-36 UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus pl... 155 2e-36 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 154 3e-36 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 154 3e-36 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 153 6e-36 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 153 6e-36 UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1... 153 6e-36 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 153 8e-36 UniRef50_C6D3W5 Two component transcriptional regulator, AraC fa... 153 8e-36 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 152 1e-35 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 152 1e-35 UniRef50_UPI00017895AE two component transcriptional regulator, ... 152 1e-35 UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7... 152 1e-35 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 152 1e-35 UniRef50_B0P6G3 Putative uncharacterized protein n=1 Tax=Anaerot... 152 1e-35 UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=... 152 2e-35 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 151 2e-35 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 151 2e-35 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 151 2e-35 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 151 2e-35 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 151 2e-35 UniRef50_C6D5X4 Two component transcriptional regulator, AraC fa... 151 3e-35 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 151 3e-35 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 151 3e-35 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 151 3e-35 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 151 3e-35 UniRef50_UPI000178A031 transcriptional regulator, AraC family n=... 151 3e-35 UniRef50_A6NRT4 Putative uncharacterized protein n=1 Tax=Bactero... 150 4e-35 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 150 4e-35 UniRef50_Q9KDT8 BH1123 protein n=1 Tax=Bacillus halodurans RepID... 150 4e-35 UniRef50_B6FKZ8 Putative uncharacterized protein n=1 Tax=Clostri... 150 4e-35 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 150 5e-35 UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostri... 150 6e-35 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 150 7e-35 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 283/283 (100%), Positives = 283/283 (100%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 282/283 (99%), Positives = 282/283 (99%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYV AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 345 bits (886), Expect = 9e-94, Method: Composition-based stats. Identities = 174/280 (62%), Positives = 206/280 (73%), Gaps = 3/280 (1%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 M +D++ L+ + + ++YFA + QVDFPRL I+L G+ D G Sbjct: 1 MDNDINQLIDSFLKKQNGIGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENA 60 Query: 61 VP---GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 P DVLY+P WN PQWQAP S+LF KQ+L S+ W+GK + K+ RR Sbjct: 61 SPLEANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVEKRQALRR 120 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GSFLLQ LNE++MQPQEQ+TAR IV SLLSHC DLLGSQ QT+SRSQALFEAIR Y Sbjct: 121 GPRVGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTSSRSQALFEAIRQY 180 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 +D YA L+RESVAQAFY+SPNYLSHLFQK G +GFNEYLNH RLE A+ LLKG+D+KV Sbjct: 181 MDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKV 240 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 K++AHACGF DSNYFCRLFRK TERSPSEYRRQYHSQLTE Sbjct: 241 KDIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHSQLTE 280 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 158/276 (57%), Positives = 199/276 (72%), Gaps = 6/276 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTG---AG 57 M D+ +L RLI L Q+ F + VP LA+ V FPRLEIVLEG+ + G A Sbjct: 1 MIEDLPDILHRLIGQKDHL-QVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAA 59 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 +TL VLYV AG W PQW PATT S+LFG+Q+LGFS+ +WDGK KQ V+R Sbjct: 60 STLTTLQVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWDGKCLHT-EKQSVSRL 118 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GS+LL +LNE+ +QP + TARL+VA+LLSHCR+ L SRS+ LF A++DY Sbjct: 119 GPRVGSYLLLSLNEVSLQP-DPLTARLVVAALLSHCREQLVGLEMRVSRSRDLFLAVQDY 177 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ++E + LTRESVA+ F+I+PNYLSH+FQK+G++GFNEYL RLE AK LL+GYDLKV Sbjct: 178 LEENLSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKV 237 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 KE+AH CGFVDSNYFCR+F++ TERSPSEYRR S Sbjct: 238 KEIAHNCGFVDSNYFCRVFKRYTERSPSEYRRHCRS 273 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 280 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 143/277 (51%), Positives = 183/277 (66%), Gaps = 9/277 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV---DTGAG 57 M +++ L+RL L+L ++ FAS+ PRLEIV+ G + + G Sbjct: 1 MSLEIAPTLARLREASLALGEVLFASALAAPAQA------PRLEIVIAGSLLRRDEHGRA 54 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 GDVLY+P+G AT S+LF KQ++ ++ QWDG Q Q + +ARR Sbjct: 55 YRQRCGDVLYLPSGEQRQITGDEEATLLSLLFAKQRIVLTLWQWDGAQLQRRQQTQIARR 114 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR G+FLLQ LNE MQP Q TARL V++LLSHC DLL ++TA QAL AIRDY Sbjct: 115 GPRTGTFLLQALNEQAMQPAAQATARLTVSALLSHCSDLLAGHLRTAPHRQALLNAIRDY 174 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ Y AL+R++VA+ F+I+PNYLS LFQ+ GFN YLNH RLE AKTLLK Y++ + Sbjct: 175 IDDHYMDALSRDAVARRFHITPNYLSQLFQRADGGGFNHYLNHVRLEQAKTLLKEYEMTI 234 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 K +AHACG+ DSNYFCRLFR+ TER+PSEYRRQYHSQ Sbjct: 235 KAIAHACGYDDSNYFCRLFRQRTERTPSEYRRQYHSQ 271 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 94/278 (33%), Positives = 159/278 (57%), Gaps = 13/278 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGA---- 56 M+ D L+S ++N S I+FA P+ +YQV+FPRLE+VL+GE+++ Sbjct: 24 MFDD---LISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDR 80 Query: 57 ---GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQ--YQNLAK 111 GD +++P+ WN P W + S+LFG++QLG S+V + + ++ K Sbjct: 81 KVSKIVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEVNFYDIQK 140 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQAL 170 + R +L+ L+ + + ++ L++ +LL + + +L + + Q+ +R Q L Sbjct: 141 HSIQTRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQDL 200 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 ++ I YI E + +TRES+A F IS N+LS LF++ G + +Y+ R++ AK +L Sbjct: 201 YQGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFML 260 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 K Y+ K+ EVA CGF D NYFCR+F+ T R+P++YR Sbjct: 261 KKYNFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 4/271 (1%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPG 63 + L S L+ P L +++FA+ +P + +D PRL+IVL GE+ + + LV G Sbjct: 14 ADLFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYGNQLEKSQHRLVEG 73 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI-G 122 ++L++PA N P + P S++F G S ++ R G Sbjct: 74 EMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPLRRIELPHPQRGEG 133 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ-TASRSQALFEAIRDYIDER 181 +L L + PQEQ + +V SLL CR ++ + R++ L+ +I +++ + Sbjct: 134 EAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAEFLYHSICNWVQDN 193 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 YA L+RESVA F I+PN+LS LF + G + F +Y+ R+ A+ +L+ Y L V EVA Sbjct: 194 YARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARMILQKYHLSVNEVA 253 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 CG+ DS+YFCRLFR+ +P EYR ++ Sbjct: 254 QRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 4/271 (1%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPG 63 + L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G Sbjct: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG 73 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI-G 122 ++L++PA N P P S++F LG S + A+Q R G Sbjct: 74 EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG 133 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDER 181 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + Sbjct: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 YA LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 95/266 (35%), Positives = 153/266 (57%), Gaps = 11/266 (4%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD-------TGAGATLVPGDVL 66 Q+ +A P P A+QV FPRLE VL G + + L G L Sbjct: 16 ELSEHTHQLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDSQGDKIEQRLTTGQFL 75 Query: 67 YVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQ--YQNLAKQHVARRGPRIGSF 124 +VPA WN P WQ S+LFG++QLG S+V W +Q + ++ K Sbjct: 76 FVPANCWNKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDVQKHSYPLSAKSPVHS 135 Query: 125 LLQTLNEMQMQPQE-QQTARLIVASLLSHCRDLLGS-QIQTASRSQALFEAIRDYIDERY 182 +LQ L ++Q + ++ +L + ++L+ ++LL Q + R+Q++F+ I Y+ E + Sbjct: 136 MLQALIDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRAQSVFQRICIYVQENF 195 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 A++RE+VA+ F ISPN+LS LF++ G + F +Y+ + R++ AK +L+ Y + ++E+AH Sbjct: 196 HKAISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKFMLRRYPMHLEEIAH 255 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYR 268 CGF D+NYFCR+F+K T R+P+EYR Sbjct: 256 RCGFRDTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 160/276 (57%), Gaps = 13/276 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF---VDTGAG 57 M+H+++ LIN L ++ + + P AYQV+F RLE++L+GE+ VD G Sbjct: 1 MHHNIAE---YLINFNGKLSKVCLSKN--TPPQGAYQVNFNRLELILDGEYDLIVDARTG 55 Query: 58 AT---LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD-GKQYQNLAKQH 113 L G+++Y+P+ W+ P W++ S+LF K Q+GFS V + G + ++ K Sbjct: 56 EKKLLLQQGEMVYIPSNAWSKPTWESTCKILSILFSKHQIGFSFVHHEVGNGFVDVQKYA 115 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL-GSQIQTASRSQALFE 172 + +L LN M + + A + +L+++C +LL G Q + SR + L+ Sbjct: 116 MPLPTSMAVEHVLDALNSMSDESRSMVMAGHLANALVTYCNELLQGPQQEKVSRREKLYR 175 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 ++ Y+ E + +TR SVA F +S ++S LF + G++ + +Y+ + RL+ AK +LK Sbjct: 176 SMCIYVQENFHKNITRTSVASRFGVSSAHVSRLFNQEGSVRYADYVTYVRLDRAKFMLKK 235 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 Y+ KV E+AH CGF D+NYFCR+F++ T ++PSEYR Sbjct: 236 YNFKVDEIAHRCGFKDTNYFCRVFKQKTGKTPSEYR 271 >UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QGZ7_9ENTR Length = 285 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 8/280 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV------DT 54 M + +LS + + A+ N P +AY + PR+E++++G + Sbjct: 1 MSAFIQSILSEFSLQCATTESVLVANGNAQPPAMAYHLHVPRIELIVKGTLSMLLPKGED 60 Query: 55 GAGATLVP-GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH 113 L P G V Y+PA WN P W +P S++F KQ +GFS+ WDG Q++ + K + Sbjct: 61 KIVKYLRPVGTVTYIPANSWNSPLWGSPVICMSIVFWKQDVGFSISNWDGTQFKEVEKFN 120 Query: 114 VARRGPRIGSFLLQTLNEMQ-MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 + + LL+ + +T IV +LL+ + + A +L + Sbjct: 121 LENSSSSVRDRLLELAESLAWTHNNSGETFAHIVYALLNDLLYQITDGMSNAKGPLSLLD 180 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 I+ +ID Y + + RESVA+ F ISP YLS LF + + FNEYL R+ +KTLL Sbjct: 181 EIKSHIDSHYQADINRESVAETFNISPGYLSRLFSRESDVKFNEYLKLARISRSKTLLTS 240 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +LK+ EV+ CGF D+NYFC++FR + +P EYRR+ Sbjct: 241 TNLKINEVSEKCGFTDTNYFCKVFRDINDCTPLEYRRKNK 280 >UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFY1_TOLAT Length = 285 Score = 220 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 116/283 (40%), Positives = 162/283 (57%), Gaps = 11/283 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDF---PRLEIVLEGEFVDTGAG 57 M H + +L L ++ + ++ DF PRLE ++EG Sbjct: 1 MSHTIEDILVESTGELYKLDAVFCSQEVSSSSH--HETDFEACPRLEFMVEGSANIKSTR 58 Query: 58 A------TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAK 111 L G VLY P + + S+ F KQQ+ ++ WDG+ L K Sbjct: 59 ESEKVITQLNSGSVLYTPVDIQFDFLFNEKSLLLSMGFYKQQIILKLIAWDGEHLNVLEK 118 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF 171 V RRGPR+G+F+LQ+L E Q +++QTA ++ SLL LL + + T R ++LF Sbjct: 119 TSVLRRGPRVGAFILQSLQEAMWQKEDKQTATYLIKSLLCSSLYLLQNPLTTQPRRKSLF 178 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 E IR+Y+D+ + LTR+SVA+ F IS YLS LFQK + FNEYLN+ RLE AK++LK Sbjct: 179 EEIRNYVDDNFYKDLTRDSVAKEFLISSTYLSRLFQKEADLRFNEYLNYIRLEKAKSMLK 238 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 +D+KVK+VA CGF DSNYFCRLF++ T+RSPSEYR QY S+ Sbjct: 239 RHDVKVKDVARKCGFNDSNYFCRLFKEKTDRSPSEYRAQYCSK 281 >UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NVM9_CHRVO Length = 272 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 140/271 (51%), Gaps = 4/271 (1%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAG---ATLV 61 ++ L S ++ P +L+++ A + +P AYQV FPRLE+VL + + G A+L Sbjct: 1 MTPLPSFRLSWPSALQRLCHAPAGKHMPAGAYQVHFPRLELVLSNRYHYSHEGCENASLS 60 Query: 62 PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI 121 + L++PA W P W A +LF ++GFS+V+ + + K+ + Sbjct: 61 AQEALFIPAEHWTLPNWCANGEVLHILFDYARIGFSLVRSGPQGVISTHKESMVLAQRGS 120 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAIRDYIDE 180 + +L L + + + RL +LL+ + L + + LF AI YI E Sbjct: 121 LNGMLDVLAGLCRDGADPEVLRLQGQALLALLQSLYDEARDSQWQQGGNLFRAICLYISE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + LTRE VA F IS +LS LF++ +GF E+L+H RL+ AK LL+ L + V Sbjct: 181 HLYAPLTREDVALRFSISATHLSRLFRQHLGLGFCEFLSHARLDLAKALLRQGQLPLSRV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A CG+ D NYF R+F++ +P YRR++ Sbjct: 241 AARCGYADVNYFHRVFKQRFAMTPCAYRREF 271 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 9/249 (3%) Query: 26 SSNGPVPDLAYQVDFPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 ++ + DF + V GE + G L PGD++ V G + + A A Sbjct: 28 EDAPNWFNIQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAP 87 Query: 84 TFSVLFGKQQL---GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ-EQ 139 + + G ++Y+ L ++ +L + L E Q + Q Sbjct: 88 LRLIFLAIRDFAVPGLPAGCLSQEKYRVL---SCGEYRYKMDIYLRELLQETSSQIEFYQ 144 Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + ++ +V++LL L+ + + + I++Y+D+ + S +T +S+++ YIS Sbjct: 145 EISQGLVSALLVLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISK 204 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 +YLSHLF++ + +YL R+E A LL +L V EV+ A G+ + YF ++F++ Sbjct: 205 HYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRI 264 Query: 260 TERSPSEYR 268 SP +YR Sbjct: 265 YGISPVKYR 273 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 19/283 (6%) Query: 1 MYHDVSY--LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGA 56 M + +Y L L + + L + Y+ + +L Y + + ++ EGE G Sbjct: 1 MLLNSNYEFLNEMLQHLQVHLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDGQ 60 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 VPG ++++PA Q+ + + K F+ + +Q L + Sbjct: 61 DYRPVPGQLVHMPAHVL-----QSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILD 115 Query: 117 RGPRIGSFLLQTLNEMQM---------QPQEQQTARLIVASLLSHCRDLLGSQIQTASRS 167 P L + E+ + +E+ I+A LSH L Sbjct: 116 ISPDHTDSLTKLFRELVELYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEI 175 Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 + L + I +I+ + ALT E +A+ ++ PNYL F K A+ +YLN R++ AK Sbjct: 176 ERL-KQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAK 234 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +LL DL +KE+A GF D+N+F + FRK SP+EYR + Sbjct: 235 SLLGTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 21/264 (7%) Query: 24 FASSNGPVPDLAYQV--DFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 + S PVP+ Y DF L + G +++ G TL G VL G ++ ++ Sbjct: 22 WCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFE 81 Query: 80 APATTFSVLFGKQQLG-FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQE 138 A + G L FS V+ K Y ++ ++V L L ++ Q Sbjct: 82 ANTNCRELHIGLTNLNLFSNVK---KDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTY 138 Query: 139 QQTARLIVASLLSHCRDLLGSQIQ-------------TASRSQALFEAIRDYIDERYASA 185 QT+ ++ SL+ LL +I + +AL E+I Y+ E Y Sbjct: 139 NQTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTED 198 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ ++++ Y+SP Y+S +F++ YL RL AK LL L +K +A G Sbjct: 199 ISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVG 258 Query: 246 FVDSNYFCRLFRKNTERSPSEYRR 269 + D YF +L++K SP++ R Sbjct: 259 YSDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4T0_9BACT Length = 353 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 118/294 (40%), Gaps = 33/294 (11%) Query: 2 YHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE----FVDTGAG 57 H ++ L+ ++ P S R S+ +D PR I L GE G Sbjct: 60 KHCIARLIDSVLRRPASGRVFL---SHEKARHCLTALDCPRFSICLWGEARYHIWQNGVR 116 Query: 58 A--TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ--WDGK--------- 104 + L GDV+Y AG P +A + V+ F V Q W Sbjct: 117 SEVRLRRGDVIYASAGCMMEPAPEANYLSLGVVPHAHLTRFLVAQKRWSHANANANGPLP 176 Query: 105 -------QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL 157 ++Q L H + G L + ++ + E + R + +LL +LL Sbjct: 177 PPSPPVTRHQFLVTHHTQKTLDADGRHLCEAIDRCAGRNPEDRWLRALFRALLIRSHELL 236 Query: 158 GSQIQTASR------SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGA 211 + + S ++A +I + L RE+VA + PN++S LF + Sbjct: 237 LADSEPGREGGEEGRSHFRWQAACQFIRDHLHEPLGRETVASFLQLHPNHISRLFARFSK 296 Query: 212 IGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 FN+Y+ R+ A+ LLK L + ++A ACGF D NYF R +RK R+P Sbjct: 297 APFNQYVMSERIRRARHLLKNPGLNLADIAAACGFSDPNYFSRCYRKVVGRAPR 350 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 104/265 (39%), Gaps = 11/265 (4%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL--VPGDVLYVP 69 L+N + + + + Y V + +L +L+GE L VPG ++ +P Sbjct: 15 LLNMQVQIWEAERTQCWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPVPGQLVLMP 74 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR-RGPRIGSFLLQT 128 A Q+ + + K FS D + L H G L Q Sbjct: 75 AR-----TRQSYSVISGRPYLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQ 129 Query: 129 LNEMQMQPQEQQTARL--IVASLLSHCRDLLGSQIQTAS-RSQALFEAIRDYIDERYASA 185 L + R ++ +LS + QI ++ YI Sbjct: 130 LVDAHRSDTLAARLREKSVMLDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEE 189 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 +T E +A ++ PNY F++ I +YL+ R+E AK +L+ L +KE+A A G Sbjct: 190 ITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATG 249 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ 270 F +NYF + FRK SPSEYR Sbjct: 250 FESANYFSKTFRKEVGYSPSEYRNN 274 >UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=Bacillaceae RepID=Q638V4_BACCZ Length = 275 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 31/286 (10%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M DV+ L L N P + +Y + N VP FP L G +F G Sbjct: 1 MKLDVNELAEYLANNPFRVEGVYRYAKNPGVPCAESTDSFPGFVFPLAGKTQFQFNGTPY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQW----DGKQYQNLAKQHV 114 L PG V++ A T + G+ + +V + ++ QH Sbjct: 61 ILSPGKVIH----------GGAKMTLAHKMLGEINWEYILVLYRISNSEREDSGFTHQHF 110 Query: 115 AR---RGPRIGSFLLQTLN------EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS 165 + PR+ L++ + + M E + +LLS + Sbjct: 111 ELLTGQSPRLVEVLMRLWDVYNQRGGISMLQTEMLFREALNEALLSVANR------ENDY 164 Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 S LFE I Y+ E Y +T ++ + ++ N LS++F+K +G EYL + R++ Sbjct: 165 ESHTLFERISSYVREYYYKDITIHTLTEQNNVNRNRLSYVFRKHAGMGPAEYLLNYRIKM 224 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A+ +L + V+++A A G D YF R+F+K SP++YR ++ Sbjct: 225 AQKMLCTSGVSVQQIAQAVGIADPFYFSRVFKKRVGISPTKYREKF 270 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 12/270 (4%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPA 70 ++ +++I ++++ A+ F + + GE GD++ VP+ Sbjct: 5 MSKDFDIKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPS 64 Query: 71 GGWNFPQWQAPATTFSVLFGKQQLGFSVVQ--WDGKQYQNLAKQHVARRGPRIGSFLLQT 128 G + + ++ + +Q + +N K V + +++ Sbjct: 65 GCLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVAL 124 Query: 129 LNEMQMQ---PQEQQTARL---IVASLLS--HCRDLLGSQIQTASRSQALFEAIRDYIDE 180 L+++ + P E A + ++ LL C++ + I+ + + + YI E Sbjct: 125 LDKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYE 184 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 YA L+ E VA F +S +YLS F+ GF EY+ + R+++A LL + + ++ Sbjct: 185 HYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDI 244 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A CGF DSNYF FRK SP +YR+ Sbjct: 245 AFECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 16/250 (6%) Query: 22 IYFASS-NGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQW 78 +YFA + P + + + +V+ GE V+ G G V+ VPAG + Sbjct: 7 VYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLN 66 Query: 79 QAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQE 138 TT V+F QQ F + + + + +G R + + ++ + Sbjct: 67 SGRVTTVYVIFEAQQECF-----------DCSARILDVKGDRYAPGWFEQIVSLKTARLD 115 Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 ++ RL+ LLS+ + RS A A+ Y++E Y ++ VA A +S Sbjct: 116 READRLL-GVLLSYLTGRENRLQREGGRSPAAARAM-AYLEENYNRNISVAEVANACGVS 173 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P++L LF++ + LN R+ A+ LL L + E+ CGF +YFCR FRK Sbjct: 174 PSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCRAFRK 233 Query: 259 NTERSPSEYR 268 +P EYR Sbjct: 234 IHGCTPGEYR 243 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 16/240 (6%) Query: 42 RLEIVL----EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFS 97 R EI+L G F PGDVL+ +G + TT LG S Sbjct: 7 RAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDE------TTIDGDLATSCLGVS 60 Query: 98 VVQWDGKQYQNLAKQHVARRGPRIGSF-----LLQTLNEMQMQPQEQQTARLIVASLLSH 152 Q G++ + + A + F L T ++ + + ++L Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILCK 120 Query: 153 CRDLLGSQIQTAS-RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGA 211 + L Q + ++L ++ YID Y ++T +S+A +P YL+H F++ Sbjct: 121 LDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHIG 180 Query: 212 IGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +Y+ R+ A+ LL G D + E+A +CG+ +SNYF +F++ +P +YRR + Sbjct: 181 YSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRRDW 240 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 31/285 (10%) Query: 7 YLLSR--LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVP 62 YL++ L N L I F+ G + + F L V+ GE F + L Sbjct: 6 YLINSEDLQNLNAKLLSIAFSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRR 65 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG 122 GD++ +P + + + G + F + Q D + Q P I Sbjct: 66 GDLVIIPPYTEHTERSSQNHPLEYYVLGIDGISF-LSQKDRECAQVFCN---FEHDPSIH 121 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF----------- 171 Q L E++ QT C+ LL I RSQ L Sbjct: 122 ELFRQMLYEIRTAQYGSQTI----------CQHLLEILILKIIRSQQLIPVSINSIRMTK 171 Query: 172 --EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 I++Y+D YA +T +++ +++ Y+ H F K + +YLN TRL+ A+ L Sbjct: 172 ECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHL 231 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 LK + + ++A + GF +YF ++FRKN +P +YR+++ Sbjct: 232 LKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVKYRQEHAKN 276 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 3/137 (2%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFE--AIRDYIDERYASALTRESVAQAFYI 197 ++A + + L D + + ++ + QA + +DYID YA LT E VA+ I Sbjct: 378 RSAAELKRAALDEL-DRIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGI 436 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 SP Y S LF++ I F +Y+ + R+E AK L D +KE+ + G+ D NYF R+F+ Sbjct: 437 SPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFK 496 Query: 258 KNTERSPSEYRRQYHSQ 274 K T SPSEYR++ ++ Sbjct: 497 KQTGLSPSEYRKKVQAR 513 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 98/269 (36%), Gaps = 2/269 (0%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 L I + G + L L GE F G + P D++ V Sbjct: 15 RESFRLLYISKSRFGGDWNSTTHTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQ 74 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + + ++ G + F + D +++ R + L + Sbjct: 75 VEHTELSLNASPLEYIVLGVASMEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRS 134 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + Q ++ L C + + A I+ Y+D Y ++ + + Sbjct: 135 LDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLL 194 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +++ YL+H FQ+ I YLN R+E +K +L + +++ GF +Y Sbjct: 195 AELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSY 254 Query: 252 FCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 F + FRK +P+EYRRQ PT Sbjct: 255 FSQCFRKAEGMTPNEYRRQTRQGKRPAPT 283 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 98/262 (37%), Gaps = 2/262 (0%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 L I + G + L L GE F+ +G + P D++ V Sbjct: 46 RESFRLLYISKSRFGGDWNSTVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQ 105 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + + ++ G + + D +++ R + L + Sbjct: 106 VEHTELSLNASPLEYIVLGVSGIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRS 165 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + Q ++ L C L ++ I+ Y+D Y ++ +++ Sbjct: 166 LDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTL 225 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +I+ YL+H FQK I YLN R+E +K +L + +++ GF +Y Sbjct: 226 AEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSY 285 Query: 252 FCRLFRKNTERSPSEYRRQYHS 273 F + FRK +P+EYRRQ Sbjct: 286 FSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLX0_9BACT Length = 282 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 11/239 (4%) Query: 42 RLEIVLEG----EFVDTGAGATLVPG--DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLG 95 RL I L+G + G T+ P ++P WN P W+ P ++LF Sbjct: 41 RLAIPLDGCHRMKIPLNGKIETIYPKRYSATFMPKNSWNLPDWELPVKVVTLLFNDDGFI 100 Query: 96 FSVVQWDGK-QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCR 154 + V G + L+++ + G + L L + + Q+ +V +LL +C Sbjct: 101 CNYVNTQGGYDHSKLSQKSIYWSGLEGHTVLN--LLKASPKHDLQKPYIHLVNALLFYCL 158 Query: 155 DLLGSQIQTASRSQA--LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 + +Q++ S S+A F+ I Y++E Y+ +RE VA F ++PNY+SHLF+ + Sbjct: 159 NSSSNQLENKSSSKAENTFKNIYLYLEENYSLVNSREDVATNFKLTPNYISHLFKSQTGM 218 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 F+ +L R+ A LLK ++ + E+A CG+ +++YFCR+F+K +PS YR ++ Sbjct: 219 SFSHHLTTIRINQACYLLKKFNQNIDEIARVCGYHETSYFCRVFKKIKGHTPSAYRLKH 277 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 23/251 (9%) Query: 36 YQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPA----GGWNFPQWQAPATTFSVLF 89 + + + +L G+ L PGD+ +P P W+A F + F Sbjct: 36 HYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAER--FGIYF 93 Query: 90 GKQQLGFSVVQWDGKQ-----YQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARL 144 + + S + G++ + + + P+I L Q +E + Q ++ Sbjct: 94 SRDTVT-SFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDE---EKQGDSYCQI 149 Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFE------AIRDYIDERYASALTRESVAQAFYIS 198 + SLL +LG + AL E Y+++ Y +T VA +S Sbjct: 150 QLCSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMS 209 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P Y S F+ + + F EYLN+ R++ A +L+ DL V VA ACGF D NYF +FR+ Sbjct: 210 PTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRR 269 Query: 259 NTERSPSEYRR 269 T SP EYR+ Sbjct: 270 LTGVSPREYRK 280 >UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5H4_9BACT Length = 285 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 7/269 (2%) Query: 15 GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE----FVDTGAGAT--LVPGDVLYV 68 L + +++FA + R + GE + G T PG+V+ Sbjct: 16 RQLPVERLFFAEPQPEPETWIHLHPCFRFIQPMTGEKEVRYAAGGRIGTRLFHPGEVIIG 75 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 G W W SV+F ++ + + DG + + + T Sbjct: 76 RPGAWIDELWNHGHEMISVVFFEKYVRALYIGHDGLRPPQKGPDVFFHTVRPADAAMHAT 135 Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAIRDYIDERYASALT 187 + + + + ARL + +LL +LL + +T+ + L+ + DY+ + + ++ Sbjct: 136 IQALLAAGSDSRAARLNLRALLEMVLELLYRERETSIPEEELLWNRVFDYLQYTFCNDIS 195 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 RE +A I P LS L + + EYLN RLE+A LL+ L V+E+A CGF Sbjct: 196 REDIAAGAGIHPARLSRLVRSRTGLAVREYLNRMRLEYAVQLLRESRLPVEEIAVQCGFN 255 Query: 248 DSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 +YF RLFR+ SP E+RR+ + T Sbjct: 256 YPSYFIRLFRRRYRISPGEFRRRKENGFT 284 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 L+ + + + ++ C + + + RS++L E R Y+ E Y+ ++ Sbjct: 390 LDTVMALEDYEDIRTWFLEKMMQTCCSI---RDKNEDRSESLVEKARSYMQENYSREISL 446 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + V++ +SP Y S +F++ F EYL + R+ AK LL+ +L +KE+ G+ D Sbjct: 447 DDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTD 506 Query: 249 SNYFCRLFRKNTERSPSEYRRQYH 272 NYF R+F+K+T +P EYR +Y+ Sbjct: 507 PNYFSRIFKKHTGITPREYRERYY 530 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 26/281 (9%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVP 62 ++ +S N +R+ F + D L + GE + + +VP Sbjct: 1 MNGTMSEYFNINKLIREAAFRMDET------HSHDCYELVYLFSGECNILVSHTIYRMVP 54 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD------GKQY--QNLAKQHV 114 G ++ +P G + + + V + L FS+ D GK + NL + Sbjct: 55 GTLVIIPPGEIHKTSYGSN---DKVRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGII 111 Query: 115 A---RRGPRIGSFLLQTLNEMQMQPQEQ----QTARLIVASLLSHCRDLLGSQIQTASRS 167 +R I + + + + E QM + +T + C+ + Sbjct: 112 EVPDKRKEYIENLITRMIYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQ 171 Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 + + + Y+ Y + + VA+ F IS +YLS F++T GF EYL + R++ A Sbjct: 172 NSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEAC 231 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 LL + + ++A ACGF DSNYF FR+ SP++YR Sbjct: 232 RLLLETNHSITDIAFACGFNDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 3/156 (1%) Query: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 V + L +++ ++P Q I+ + + + + + F+ Sbjct: 89 SVYDDFKFVQKALRIKVDDYLLKPIRPQKIVDILNEFIKDNKKRIEESNKNCTEE---FQ 145 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 + +YID+ + + +T + VA S +YLS LF+K I FN Y+ R++ AK +L Sbjct: 146 EVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILIN 205 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++ + E+A + G+ + NYFC++F+K +PSEYR Sbjct: 206 SNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 21/252 (8%) Query: 32 PDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLF 89 P + +F + I+LEGE ++ G G V + Q +A + + Sbjct: 26 PYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEHGEQQKAGTYSHQL-- 83 Query: 90 GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLL----QTLNEMQMQPQEQ--QTAR 143 +G S + +G + + L Q ++E+ Q E Q Sbjct: 84 ---HIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEVESALQIKA 140 Query: 144 LIVASLLSHCRDLLGSQI--------QTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 L++ L+ R L Q +T R + L Y++ + +T E +A+ Sbjct: 141 LVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHDEEITLEQLAEML 200 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 Y++P YLS F+ +G YL RL HAK LLK L VKEVA G+ D+ +F +L Sbjct: 201 YVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDAYHFSKL 260 Query: 256 FRKNTERSPSEY 267 F+K +SPS++ Sbjct: 261 FKKYYGKSPSQF 272 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 18/268 (6%) Query: 21 QIYFASSNGPVPDLAY----QVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN 74 + +A P+ + D + +V G+ F G + GD+L G + Sbjct: 13 HLLYAGKVSDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGVLH 72 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ-----HVARRGPRIGSFLLQTL 129 Q + GFS+ + + + +R P I + + + Sbjct: 73 EEQSSIDNPLIT-----YYCGFSLPKASPSEDWVIPPDVEPVIRSSRVFPEIEALMKMIV 127 Query: 130 NEMQMQPQEQQ-TARLIVASLLSHCRDLLGSQIQTASRSQA-LFEAIRDYIDERYASALT 187 +E ++ + +R ++ S++ R + +Q S L E I+DYID + ++ Sbjct: 128 DESSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQNIS 187 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 + + + F+++P Y+SH+F+ I Y H R+ A LL ++KV EVA G+ Sbjct: 188 LKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGYD 247 Query: 248 DSNYFCRLFRKNTERSPSEYRRQYHSQL 275 + NYF +FR+ T SP+ +R L Sbjct: 248 NPNYFSIIFRRVTGLSPNRFRESNQQNL 275 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 5/270 (1%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLY 67 S + N L I + + + F L V++G EF+ + D + Sbjct: 11 SDIKNLSFRLESITKSKYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVI 70 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + + ++ G Q L FS + + + ++ I +L Sbjct: 71 INPQVEHTEVSSPDSPLEYIVVGIQGLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNA 130 Query: 128 TLNEMQMQPQEQQT---ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 + E Q L + + ++ + S++ I+ Y+ Y Sbjct: 131 MVQEATNQALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRE 190 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ E++A ++S Y+SH F+K + EYL R++ +K LL+ + + +VA Sbjct: 191 SIQLEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIV 250 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 GF YF + FRK T SP++YR +Y + Sbjct: 251 GFTTPTYFSKQFRKITGISPTDYREKYQKE 280 >UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R3_9FIRM Length = 509 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%) Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 ++A S LF Q F+ D +N+ Q + S ++E ++ Sbjct: 315 NFKAAKDVVSTLFSNLQSNFT----DEASVKNICTQIYLISYRLVMSTYNLPMDEKYVKM 370 Query: 137 QEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 + + + S++S + L Q+ Q+ + + E +YI E L+ E +AQ Sbjct: 371 LTESSDIFQLKSIVSDMINDLQIQLTQSVKKYSSFIEESLNYIKEHLEDDLSLEQIAQHI 430 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 +I+ +Y S F+K Y+N+ R+ AK LL +LK E++ A G D YF L Sbjct: 431 HINESYFSRTFKKECGNSVISYINNLRINKAKELLATSNLKTFEISEAVGIHDPAYFSVL 490 Query: 256 FRKNTERSPSEYRRQY 271 F+KNT SP YR Q+ Sbjct: 491 FKKNTGMSPKAYRDQF 506 >UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P7_RUMHA Length = 549 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 28/231 (12%) Query: 65 VLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNL-------------AK 111 VL + + A TF + F K+ L ++VQ D ++ ++ A+ Sbjct: 311 VLVSDVEAHFWEERHARHDTFDISFLKKDLRQALVQQDKEKVNSVFEELSALFTEFHPAR 370 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLS------HCRDLLG------- 158 + V + F L + E + +E +++ LL H R LL Sbjct: 371 EQVVNACANLYYFFLSYVEEDALIKEEMPYPSVVMEILLECFTLKAHTRWLLKFGSWVGN 430 Query: 159 --SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNE 216 S++ + EA ++Y+ E Y LT ++A IS YLS +F+K N+ Sbjct: 431 TMENFHRGSKTDKIVEAAKEYVRENYGEKLTLAAIASKIGISQGYLSSVFKKQTGGNLND 490 Query: 217 YLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 Y+N ++E AK LL+ ++ + E++ GF + YF ++F+K T +PSEY Sbjct: 491 YINQMKIEKAKELLEKHEYMMYEISDMLGFENPYYFSKVFKKLTGITPSEY 541 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 14/250 (5%) Query: 36 YQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFPQWQAPATT-FSVLFGKQ 92 + + + +L G + + LVPGD + +P + + +T LF Sbjct: 30 HYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNSTVKRYNLFFTM 89 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARR-GPRIGSFLLQTLNEMQMQPQEQQTARL------- 144 S+ D K + + + + + + Q + Sbjct: 90 DFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQDSCSQAVIPAYI 149 Query: 145 -IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 ++ SLL RD + Q+Q ++ +A YI + ++ VA ++SP Y S Sbjct: 150 SLILSLLVRNRDHI--QLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPTYYS 207 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 F++ +GF EYL TRL A LL L V E+A CGF D NYF FRK S Sbjct: 208 KKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEFGLS 267 Query: 264 PSEYRRQYHS 273 P +YR++ + Sbjct: 268 PLQYRKRQKN 277 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 17/257 (6%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQA----PATTFS 86 D + D + ++ GE + + GD++ +P + P Sbjct: 28 DGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERIL 87 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ-----QT 141 V F + + + + + Q AK V R + Q L M + ++Q + Sbjct: 88 VNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEY 147 Query: 142 ARLIVASLLSHCRDLLGSQIQTA------SRSQALFEAIRDYIDERYASALTRESVAQAF 195 +L++A LL + + ++ R + YI+ Y L+ +A F Sbjct: 148 CQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRF 207 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 ++SP YLSHLF + + Y+N R+E A LL+ +L V E+A+ G+ +F R+ Sbjct: 208 HLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRV 267 Query: 256 FRKNTERSPSEYRRQYH 272 F+K SP YRR+ Sbjct: 268 FKKAKAVSPQSYRREQR 284 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 3/142 (2%) Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 + E+Q + + + C L S + ++ + ++YI+E + ++ Sbjct: 391 IRELQSCTDIENLKKWFLDKTREICTKLENS---KEKEAGSIIDRAKEYINENFRRDISL 447 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + V++ ISP Y S LF++ F EYL RL++A+ LL+ L +KE+ G+ D Sbjct: 448 DDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSD 507 Query: 249 SNYFCRLFRKNTERSPSEYRRQ 270 NYF R+F+K +PSE+R + Sbjct: 508 PNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGW 73 L + A+S+ + + F L V +G F G + D++ + Sbjct: 17 KAQLLYVTCATSDKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIP 76 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + + G + + F + + + + ++R I +L + E+Q Sbjct: 77 HTEFGNKEQPWEYIALGIEGVQFQY--SEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQ 134 Query: 134 MQPQEQQTA--RLIVASLLSHCR----DLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 Q + QT L+ LLS R + L + Q +R L E YI+E Y +T Sbjct: 135 TQQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVE---QYINEHYHEDIT 191 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 ++++ +I+ YL H F+ + YL R+E A+ LL+ + V ++ GF Sbjct: 192 LDTLSALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFS 251 Query: 248 DSNYFCRLFRKNTERSPSEYRRQ 270 +YF + FR+ T +P+ YR++ Sbjct: 252 SQSYFSQTFRRLTGTTPNAYRKK 274 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 12/145 (8%) Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 +L E++ EQ L H + + + + +DYIDE Y LT Sbjct: 380 SLEELKRTATEQ----------LQHMVHYIQAWRHQQANGK--IGKAKDYIDEHYHHPLT 427 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 E VA+ ISP Y S LF+ + F +Y+ R+ AK + + +KE+ G+ Sbjct: 428 LEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPNKSLKEICFLVGYN 487 Query: 248 DSNYFCRLFRKNTERSPSEYRRQYH 272 D NYF R+F+K+T SP+EYR++ H Sbjct: 488 DPNYFSRVFKKHTGMSPTEYRKKLH 512 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 24/263 (9%) Query: 25 ASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPA 82 SS+ P P ++ + L +L GE + T+ GD++ V + + A Sbjct: 25 GSSSMPRP---HEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLH-----STA 76 Query: 83 TTFSVLFGKQQLGFS--VVQWDGKQYQNLAKQHVAR-------RGPRIGSFLLQTLNEMQ 133 ++ +LF + +GFS ++ NL +R P I L L E Q Sbjct: 77 SSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQ 136 Query: 134 MQPQEQQTA-RLIVASLLSHCRDLLGS-QIQTASRSQALFEAI---RDYIDERYASALTR 188 + + R ++ LL + + Q QT + + I YI + LT Sbjct: 137 TEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTL 196 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 E VA+ FYISP+YLS +F + F EY+ R+ A+ +L V+ ++ GF Sbjct: 197 EQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEH 256 Query: 249 SNYFCRLFRKNTERSPSEYRRQY 271 +F + F+K +P +YR+++ Sbjct: 257 IAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%) Query: 120 RIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYID 179 R+ F L ++ M+ Q + L S L DL + E + YI+ Sbjct: 380 RVFQFCFSHLQKL-MRTQNYRGITLWATSFLEEISDLFAG---AKRNENNIVERVVKYIN 435 Query: 180 ERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKE 239 E + + + ++Q Y++P Y S LF+K + EYL R+E AK L L + E Sbjct: 436 ENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEAAKKYLANPSLTISE 495 Query: 240 VAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +A G+ D+NYF ++F+K SPSE+R+ Sbjct: 496 IARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 19/270 (7%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLY 67 + N + + P+ + DF L IV +G + + L + Y Sbjct: 7 NDFFNNSDATVCTEVRAPQEDFPE--HSHDFHELMIVTKGAGQHILNDVPINLAQNYICY 64 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV-------QWDGKQYQNLAKQHVARRGPR 120 + + + ++LF K +L +S + + D +Q ++ + + + Sbjct: 65 ISPKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPKESDAQQSWYISTETM----KK 120 Query: 121 IGSFLLQTLNEMQMQPQEQQ--TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYI 178 + + + Q +E + E + T L ++ R L SQ AS + L I D+I Sbjct: 121 VCTLMAQIEHESSLHSVESRLMTEALFQQLVVEISRGRLTSQSNNASDNSIL--KIIDWI 178 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 YA ++ F IS LS ++ + FN Y++ R+ HA LL DL V Sbjct: 179 QNNYAEEFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVT 238 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++A G+ DSNYF F++ T ++P+E+R Sbjct: 239 DIAFQVGYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 12/189 (6%) Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG--SFLLQTLNEMQMQPQEQ 139 + LFG+ L + V++ L + +A I + Q LN Q E Sbjct: 332 CKLYIELFGENNLKYKVIKLI---IMLLLETGIATSDESIDVEKLISQILNSSYEQIVE- 387 Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + V SL S + I S ++I++ Y+ +T ++ F +P Sbjct: 388 -IFKKAVLSLFSKAKTKHEQIINNDS-----INKAIEFINQNYSEEITLSQISSTFNFNP 441 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 Y S LF+K + F YL R++ A LLK +KE++ A GF D NYF + F+K Sbjct: 442 YYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKF 501 Query: 260 TERSPSEYR 268 T +PS +R Sbjct: 502 TGMTPSAFR 510 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 11/180 (6%) Query: 96 FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT-LNEMQMQPQEQQTARLIVASL--LSH 152 S VQ KQ + + +Q V +IG +Q+ ++ M+ +E A V+S + H Sbjct: 248 ISFVQSLLKQLEKVLQQRV-----KIGIGTIQSGVDGMKRSYKEASIAVRYVSSFSRVMH 302 Query: 153 CRDL-LGSQIQ--TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 D+ L +++ T ++ E + ++ E Y +T E VA+ +++P Y S LF+K Sbjct: 303 VDDVPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKE 362 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 F +Y+ H R+E AK L++ L VKE + G+ D NYF R+F+K T +P+EYR+ Sbjct: 363 TGQTFIDYVTHLRIEKAKQLMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQ 422 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 8/166 (4%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRD--------LLGSQIQTASRSQALFEAIRD 176 L +E+ M+P Q+ ++ ++ L G + + + + ++ + Sbjct: 96 LEMGADEILMKPSHQEDVIALIRRYMTFNEKENDKFDSMLDGITAKNSIQDGKVIQSALN 155 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+E Y + +T E VA+ +ISP YLS LF+K + F Y+ +++ AK LL+ DL Sbjct: 156 YIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKELLENTDLP 215 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTP 282 V +A + + NYF ++F+K +PSEYR++ L++K Sbjct: 216 VIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKKHNS 261 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 3/152 (1%) Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 + L + E I+ L++ + ++ Q R+ +L + Y Sbjct: 389 PEAVSDLALASSTEFLTLDNLADMRERILERLMALVAQVAETREQ---RNSSLIDRASKY 445 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I+ ++ LT E VA+ Y+SP Y S LF++ + F +YL RL+ A+ LL L V Sbjct: 446 IEANFSQDLTLEEVARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKLPV 505 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 E+A G+ D+ YF ++F+K +PS +R+ Sbjct: 506 AEIATRVGYRDARYFGQVFKKQEGYTPSVFRK 537 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 9/183 (4%) Query: 88 LFGKQQLGFSVVQWDGKQYQNLAKQHVARRG--PRIGSFLLQTLNEMQMQPQEQQTARLI 145 +F Q + + LA++ V +G P LL L + E++TAR Sbjct: 347 VFKNQASALEEEKLQLMEMLLLARRMVQDQGGAPVRDQELLSAL----LAAGEEETAR-- 400 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 ++ +L + + + +DYI + + ++ E VA+ ISP Y S L Sbjct: 401 -QKFVAAMVELAQAVVIKNQEPDGIITRAQDYIRQNFRKDISLEEVARTVGISPYYFSKL 459 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ + F EYL R+E AK LL +L +K+V G+ + NYF R+F+K +P+ Sbjct: 460 FKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYANPNYFSRIFKKWVGITPT 519 Query: 266 EYR 268 E+R Sbjct: 520 EFR 522 >UniRef50_B9MP59 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=B9MP59_ANATD Length = 502 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 90 GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASL 149 G+ QL F K Y + ++ RIG L + E I ++ Sbjct: 323 GRYQLDFL------KTYLSFVVVSISSYFSRIGLNLEDEIEWFSSLRLEFSNVEDIEKNM 376 Query: 150 LSHCRDLLGSQIQ-TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 L C +L Q S S + + YI E Y LT +SVAQ FY++P YL LF+K Sbjct: 377 LKFCEGILNKFRQWKTSLSNGIMSELEKYIKENYNKNLTLKSVAQKFYLNPVYLGQLFKK 436 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + FN YL R+E AK LL ++K+ E++ A G+ D++YF + F K +P+++R Sbjct: 437 HYGMYFNSYLQKIRVEEAKRLLMSTNMKIYEISQAVGYNDTDYFIQCFTKFCNMTPNQFR 496 Query: 269 RQYHS 273 ++Y Sbjct: 497 KKYRK 501 >UniRef50_C6CXK7 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CXK7_PAESJ Length = 481 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 20/215 (9%) Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGS 123 D +Y G F +A F Q LG S V + L Q V G I + Sbjct: 276 DEIYRIIQGNRFDDMEAYINGLQAYFKDQHLGMSEVVY-------LWNQAV---GILINA 325 Query: 124 FLLQTLNEMQMQ---PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ------ALFEAI 174 + + L +M+M+ E + SL S D+L S Q SRS + F + Sbjct: 326 Y-AEELKDMEMEFLNYSEIKERFEHFESLCSFLHDVLASITQGNSRSLQEGDILSCFNRM 384 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YID Y L + ++ FYI+ Y LF+K F+EY++ R++ A+ LLK D Sbjct: 385 VAYIDSHYEQKLYLKDLSAQFYINQVYCCQLFKKNLGKTFSEYVSELRIKKARELLKKTD 444 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L ++E+A G+V+ YF ++F+K+ +PS++R+ Sbjct: 445 LSIEEIAIQTGYVEYYYFNKVFKKHCGITPSKFRK 479 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 23/257 (8%) Query: 36 YQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNF---PQWQAPATTF----- 85 + DF + +L G ++ + GD++ + G + PAT F Sbjct: 33 HSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGLC 92 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI 145 V FG + + + + + L + M ++ ++ R I Sbjct: 93 DVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRYI 152 Query: 146 VAS--LLSHCRDLLGSQIQTAS----------RSQALFEAIRDYIDERYASALTRESVAQ 193 + L+ LL Q + + + + I +Y ++ Y+ ++ + +A+ Sbjct: 153 MLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIAE 212 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY-DLKVKEVAHACGFVDSNYF 252 Y+SP Y+S +F+ +L + RLE AK LL+ D ++EVA G+ D +F Sbjct: 213 NMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYHF 272 Query: 253 CRLFRKNTERSPSEYRR 269 +LF+K PS+ RR Sbjct: 273 SKLFKKRFGMPPSKIRR 289 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 85/178 (47%), Gaps = 7/178 (3%) Query: 100 QWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA----RLIVASLLSHCRD 155 +WD QY + + + P + + Q L ++ R ++ L Sbjct: 364 EWDWIQYHWTENEVKSTQEPVEDAEISQDLPSALPYSEDGMICWDRWREQISGRLYAASR 423 Query: 156 LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 +L Q S+ + I Y+++ Y ++ + +A F++S Y+S F++ + + Sbjct: 424 VLT---QIHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLS 480 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 ++L R+E AKTLL +++ ++A G+ D YF ++F+K +P+EYR+++ + Sbjct: 481 DFLGRIRIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKKHMN 538 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 + +Q + + +G + L +L+ + + ++ + H + + Sbjct: 363 QDFQQMVHYVLQIKGIQAHQLLSDSLSVERFARAGRSAKDALI--WIRHIVGKSLDYMNS 420 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 S ++ E + YI + A ++RE +A Y++P+YL+ +F++ + ++YL RL Sbjct: 421 LEHSPSVVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSISDYLLQQRL 480 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 A LL DL V VA G+ + ++F R+F+K +P EYR+ S+ ++ Sbjct: 481 RIAAELLANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQSQESRQSD 534 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + +LS +L Q + A + YI E YA LT E V+ S +Y S L Sbjct: 409 LRGMLSEAMQVLSEQKRQADTRP--IRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSL 466 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K F EYL+ R+ AK LL+ +L V EV G+ D YF + F+K T P Sbjct: 467 FKKETGQNFLEYLSEVRMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPG 526 Query: 266 EYRRQY 271 E+R+ Y Sbjct: 527 EFRKLY 532 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + + R ++A + + +T S L I DY+D Y ++ VA Sbjct: 400 TEVTDPAELRRLLAGWADAAEEYGADRRETDS--SQLIWHIVDYLDAHYFEDISLIDVAT 457 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 F++ P+YLS LF+ + F EY+ R+E A LL+ + K+ E++ G+ + YF Sbjct: 458 RFHLDPSYLSKLFKSVTSENFIEYVTRKRIEKACELLRSSERKISEISELIGYENQRYFS 517 Query: 254 RLFRKNTERSPSEYRRQYHSQLTEKPTT 281 ++F+K+T ++PSEYR S P Sbjct: 518 QVFKKSTGQTPSEYREAQQSGKAGNPKN 545 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 11/263 (4%) Query: 18 SLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNF 75 L ++ + F L VL G F+ + D++ + + Sbjct: 19 HLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHT 78 Query: 76 PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM- 134 + ++ G L F + D +Y + R+ + L E + Sbjct: 79 EKSSLEDPLEYIVLGVDGLNFVID--DANEYLLFHSDEM---KDRLDFYFRTILEETENS 133 Query: 135 QPQEQQTARLIVASLLSHCRDLLGSQIQT---ASRSQALFEAIRDYIDERYASALTRESV 191 Q ++ + ++ L+ H S ++ + YID + +T + + Sbjct: 134 QKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKL 193 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ I+ Y SH F +T I YL R+ ++ LL D+ + ++A CGF S+Y Sbjct: 194 AEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSY 253 Query: 252 FCRLFRKNTERSPSEYRRQYHSQ 274 F + FRK+ +P+ YR+Q+ Sbjct: 254 FTQCFRKSCGMTPTAYRKQFLRN 276 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 8/267 (2%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVP 69 LIN L + + G + F L V +G F + D + + Sbjct: 14 LINNQARLLYVSSSKYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIIN 73 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + ++ + F + + K Y + A I +L + Sbjct: 74 PNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSLKDYISCN---YANYKNEILFYLNLMV 130 Query: 130 NEMQMQPQ-EQQTARLIVASLLSHCRDL--LGSQIQTASRSQALFEAIRDYIDERYASAL 186 E Q + + + ++ LL + L + + + I++YID Y + Sbjct: 131 KESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEI 190 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T +++A+ +++ YL+H F+ + YL R+ +K LL+ DL + +++ GF Sbjct: 191 TLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGF 250 Query: 247 VDSNYFCRLFRKNTERSPSEYRRQYHS 273 +YF + F+K+T SP +YR+ + Sbjct: 251 SSLSYFAQAFKKSTNFSPLQYRKNHQK 277 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 23/242 (9%) Query: 45 IVLEGE-FVDTGA-GATLVPGDVLYVPAG--GWNFPQWQAPATTFSVLFGKQQLGF-SVV 99 +V EG +++ G TL GDV +P G W + P + + +GF V Sbjct: 1 MVQEGRGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETP-------WSYRWIGFEGVS 53 Query: 100 QWDGKQYQNLAKQHVARRG---PRIGSFLLQTLNEMQMQPQEQQTAR----LIVASLLSH 152 + + Q R+ ++G ++ Q L Q+ + + L+ A L++ Sbjct: 54 ARECLESAGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITD 113 Query: 153 CRDLLGSQIQTASR----SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 R L + S S E +YI+E Y+ L +A ++ +YL+ FQ+ Sbjct: 114 NRKNLAGMGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQE 173 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 EYL R+E AKTLLK D++V EVA G+ D F ++F+ T RSP EY+ Sbjct: 174 NIGCSPREYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYK 233 Query: 269 RQ 270 + Sbjct: 234 EE 235 >UniRef50_A3DK80 Two component transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DK80_CLOTH Length = 544 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 12/189 (6%) Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI 145 + F QL F++ + QY + K + R+ F ++ + + ++ Sbjct: 368 RIAFAANQLVFNISNFIDMQYDFINKLYDFRK------FNNMDFSKFSSKDEIKEFFLSF 421 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 V LL+ ++ +++ L + +Y+ +T ++A IS NY L Sbjct: 422 VTELLNVVKEY------KPAQNNTLIKKACEYVLNHIDQEITLMTIADYLNISKNYFCSL 475 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ F EY+ ++E AK LL+ + K EV+ G+ +++YF RLFRK T+ SP+ Sbjct: 476 FKQETGYNFLEYVTKVKMEWAKKLLREGNYKTYEVSEMLGYREASYFSRLFRKYTKLSPA 535 Query: 266 EYRRQYHSQ 274 EY++ + +Q Sbjct: 536 EYKKNFENQ 544 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 9/262 (3%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 L I + + + F L V+ GE F+ + GD++ +P Sbjct: 15 KLNTRLLSISLVKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPY 74 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + Q + + G ++ F R + Q L E Sbjct: 75 LEHTEQSVKGKSLEYYVIGIDKISFLAENGQTGIQAFCN----FRDQSSVSDIFAQMLYE 130 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE---AIRDYIDERYASALTR 188 M+ + + +L I + S+ + + I++Y+D Y +T Sbjct: 131 MRNDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITL 190 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +++ +++ Y++H F K + +YLN RL+ A TLL+ D V ++A + GF Sbjct: 191 DTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSS 250 Query: 249 SNYFCRLFRKNTERSPSEYRRQ 270 +YF + FRK +P +YR+Q Sbjct: 251 QSYFTQSFRKYYGMTPLQYRQQ 272 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 79/147 (53%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 + + E + A +A + + R+ + +T + + + +YI + YA +T Sbjct: 376 DYFRKIDEARYAGEAIAVVEAFIREAERAIGETNTSVNPNMDRLLEYIQDHYADPITLTG 435 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 VA+ F+ + +YLS F GF+EYLN RLE A LL +L + E++ + G+ D + Sbjct: 436 VARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELLLTTELTISEISASVGYSDQS 495 Query: 251 YFCRLFRKNTERSPSEYRRQYHSQLTE 277 YF ++F+K T SPS++RRQ ++ E Sbjct: 496 YFTKVFKKQTGISPSQFRRQNAREIRE 522 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 16/279 (5%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVD--FPRLEIVLEGE--FVDTGA 56 M ++ ++ +S + + + L + L I G F G Sbjct: 1 MEISLNEIIDYYAKADVSFVGAFGERVSPQLKVLDRHTNPAGGGLVIPFSGSACFTFDGK 60 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 + PG V++ G + + + + + Q + +Y K Sbjct: 61 PYVIEPGMVVHAGPGMRLSKEVIGDRE-----WEYAVIHYHIPQHERDEYPLFHKDFSLA 115 Query: 117 RG--PRIGSFLLQTLNEMQMQPQEQQTAR--LIVASLLSHCRDLLGSQIQTASRSQALFE 172 G ++ + Q L+ +Q P + ++ SLL + Q + L E Sbjct: 116 HGRSAKVPHLVRQILD-IQSIPGAAAKFQTKVLFLSLLQEI--FTAACGQPGQENSKLIE 172 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 YI YA LT + VA F + S+LF++ + YL R+ AK LL Sbjct: 173 EAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRISKAKELLGS 232 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 VK+VA G+ DS YF + F+K T SPSEYR + Sbjct: 233 PGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYREGF 271 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 3/122 (2%) Query: 149 LLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 LL R + + S ++ + ++YI+ YA ALT ES A+ +SP Y S LF+ Sbjct: 406 LLRIVRHVQAWR---NSHAKDMLYKAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKD 462 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + F +++ R+ AK LK L +KE+ ++ G+ D NYF R+F+K+T SP+EYR Sbjct: 463 RFGMTFIDFVTDVRIRKAKHFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYR 522 Query: 269 RQ 270 ++ Sbjct: 523 KE 524 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 13/246 (5%) Query: 36 YQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQAP--ATTFSVLFGK 91 + + + +L G+ L PGD + +P + ++ A + + F K Sbjct: 38 HYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYFTK 97 Query: 92 QQL-GFSVVQWDGKQYQNLAKQHVARRGPR--IGSFLLQTLNEMQMQPQ-----EQQTAR 143 ++ F + +A P LL L+ Q +QQ+ Sbjct: 98 EEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQSLL 157 Query: 144 LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + L+ C+D + A+ +A R YI+ +Y LT +++A +SP Y S Sbjct: 158 FQILVLIGRCQDTQQEKDSLNDSEAAIVKAAR-YINLQYREHLTLDAMAAMSNMSPTYFS 216 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 F+ + F EY+N+ R++ A LL+ D V +A ACGF D NYF +F+K T S Sbjct: 217 RKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTGLS 276 Query: 264 PSEYRR 269 P EYR Sbjct: 277 PREYRN 282 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 16/256 (6%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 + D L +L GE + + GD+++V + ++ Sbjct: 30 SADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLY 89 Query: 91 KQQLGFSVVQWDGKQYQNLAKQ-----HVARRGPRIGSFLLQTLNEMQMQPQEQQ----- 140 F+ + + + L + + R + + + +M + Q Sbjct: 90 INPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGSSW 149 Query: 141 -TARLIVASLLSHCRDLLGSQIQTASRSQALF---EAIRDYIDERYASALTRESVAQAFY 196 V LL R +++A L +A+ Y+++ Y ALT VA+AF Sbjct: 150 LLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEAFR 209 Query: 197 ISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLF 256 ISP+YLS LF++T F++YLN R++ A+ LL+ D + ++A GF + ++F ++F Sbjct: 210 ISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGKMF 269 Query: 257 RKNTERSPSEYRRQYH 272 ++ + SP YR+QY Sbjct: 270 KRTVQLSPRAYRQQYR 285 >UniRef50_C6CT83 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT83_PAESJ Length = 472 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 14/175 (8%) Query: 109 LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR----------LIVASLLSHCRDLLG 158 L+ +H R SFL + + +Q + + A ++ HCR Sbjct: 301 LSTRHAFRVYNMTISFLFKLGQTEETLYSYEQLVQSFGDVFDMLGELQALVVRHCRGGEA 360 Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 +T +R+ F I Y+ + + L+ + +++ F+++P+Y+S LF+K F Y+ Sbjct: 361 HPPETKNRT---FNQILQYVTDHFREELSLQGLSEQFFMNPSYISQLFKKEVGETFVGYI 417 Query: 219 NHTRLEHAKTLL-KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 + R+ HA LL + D + E+A G+ D YF RLF+K T ++P++YR + Sbjct: 418 SQLRIAHACKLLDENDDYSIHEIAEKIGYNDYFYFARLFKKMTGKTPTQYRSERK 472 >UniRef50_A6NTA8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTA8_9BACE Length = 345 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 15/218 (6%) Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 ++ P + L G GF Q+D + ++ AR P G L+ P Sbjct: 108 EYVVPIRSDGTLLGSINAGF--FQFDEGRSIVRIRRTCARHTPLDGEEALRLYRSCIRTP 165 Query: 137 QEQQTARLI-----VASLLSHCRDLLGSQIQTASRSQA--------LFEAIRDYIDERYA 183 + A ++ +A L +L T S+S+ + +YI + Sbjct: 166 EGVAGADILPGLELLADFLGQTYRMLRPTHNTPSQSRRYHNSSEDTILTHAIEYIRLNAS 225 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 +T +++ + S +YLS +F++ I N Y+N R+E AK L + E+A Sbjct: 226 GHITMADLSRFCHCSESYLSRIFKRRTGININVYVNKVRIELAKNHLLLSSENIAEIAAG 285 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 GF D NYF R+F SP+E+RR++ QL P T Sbjct: 286 VGFNDPNYFSRVFTNIIGISPTEFRRRFQGQLPSNPET 323 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 105/262 (40%), Gaps = 11/262 (4%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGW 73 P L ++ + F L VL G F+ + +++ + Sbjct: 2 PYRLLYSSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIR 61 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + + ++ G + L F + K+Y N+ + + L EM Sbjct: 62 HTEVSDKNSPLEYIVLGVEGLNFLIYN--DKEYLNIQ---CEDFSENLDFYFHTILREMD 116 Query: 134 MQPQEQQT-ARLIVASLLSHCRDLLGSQIQTASRSQALFEAI---RDYIDERYASALTRE 189 Q + +T + ++ +L+ GS ++ S+ + + +ID + +T + Sbjct: 117 EQKESYETICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLD 176 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 ++A+ +++ Y +H F + I YL R+ ++ LL DL +A CGF S Sbjct: 177 TLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSS 236 Query: 250 NYFCRLFRKNTERSPSEYRRQY 271 +YF + FRK +P+ YR+Q+ Sbjct: 237 SYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 15/251 (5%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSV--LFG 90 A+ +F + +L G F + G+++ + G + + + + + F Sbjct: 23 AHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERICITFS 82 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVAS-- 148 K L ++ + Q R + +++ + Q T L +AS Sbjct: 83 KSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYLASSH 142 Query: 149 ---LLSHCRDLLGSQIQT------ASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 L+ L Q AS + E YI Y S +T E A +S Sbjct: 143 VYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYCNMST 202 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 Y S F+ GF EYL R+ A LL L + E+A GF DSNYF +F++ Sbjct: 203 TYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVFKRM 262 Query: 260 TERSPSEYRRQ 270 SP +YR+ Sbjct: 263 KGISPCKYRKN 273 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 7/146 (4%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS- 184 + ++E+ + + ++ R I+ + + + S+++ L + I E Y+ Sbjct: 224 WRQISELSTKEKFREWMRNIIEVVCEYV------SLTKNSKNRKLIDEAIKLIQENYSDL 277 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ S+A+ YI+PNYLS LF+ + F++YL R+E AK LLK +K+ EVA A Sbjct: 278 NISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAKELLKDVKVKIYEVAEAV 337 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQ 270 G+ D +YF ++F+ T +P EYR + Sbjct: 338 GYTDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 5/130 (3%) Query: 146 VASLLSHCRDLLGSQIQT-----ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPN 200 + L +L S Q S++ L + YI+E Y + E++A +++P+ Sbjct: 282 IEDLSYWVIHMLDSFTQNVFNFNESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPS 341 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 Y S +F+K + F+ YLN R+E +K LLK D + E+A GF D +YF ++F+ T Sbjct: 342 YFSSIFKKEVGVSFSNYLNKIRIEQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLT 401 Query: 261 ERSPSEYRRQ 270 + +P +YR+ Sbjct: 402 KMTPKQYRQN 411 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 4/178 (2%) Query: 100 QWDGKQYQNLAKQH---VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDL 156 Q D +N+ K+ + + I L + Q + I SL+ Sbjct: 331 QGDKNSIENVYKKLFDLILTKAKEICPVLKDEFAKSMAFSLNMQESNNIEKSLIEFVHYC 390 Query: 157 LGS-QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 + Q SR + + + YI+ YA+ + +A+ +SPNY +F++ F Sbjct: 391 IDKIQNVKESRHKKIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFV 450 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 ++LN R+ AK LL +LK EVA GF D YF +F+K T SPS+++ + Sbjct: 451 DFLNELRINKAKELLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQK 508 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%) Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 P + L + + + ++ + L R+ Q + S + + I+ Y Sbjct: 356 PPVLDDILNEQIFSVNDCSSSEELLEKVKVILQELTRE---DQRTGETGSSRIVQEIKRY 412 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I E YA + ++A Y+SP YLS LF++ + YL + R+EHAK L +DLK+ Sbjct: 413 IQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLKI 472 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 EVA G+ F R+F+K +P EYR Q Sbjct: 473 YEVAELTGYASPKQFIRVFKKEVGVTPGEYRNQ 505 >UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2N9_9BACT Length = 354 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 111/268 (41%), Gaps = 37/268 (13%) Query: 40 FPRLEIVLEGEF------VDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 FPR VLEGE+ D A + G++ ++ WN + AP F+V F Sbjct: 76 FPRFIFVLEGEYRVIHDINDRSADRVVRTGELYWIRPNDWNLVRNDAPRVVFAVSFTPDH 135 Query: 94 LGF-----------SVVQWDGKQ-------YQNLAKQHVARRG----PRIGSFLLQTLNE 131 F S V D Y VA R + L +L + Sbjct: 136 TRFLWYHHKREPENSNVCLDTDNAFHTELWYHTHVPVSVALRYAIGLIDEATTLDASLGK 195 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQ---------TASRSQALFEAIRDYIDERY 182 + + Q+ +LL+ C L + Q T S S+ F+ I +I ER Sbjct: 196 LGTDSERQELLHTTGEALLAWCLQELHADAQLAESARFSGTVSPSRRTFDEICAWITERL 255 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 L R SVA F +S ++L+ LF+ GF E++ R A+ LL L +KEVA Sbjct: 256 QHDLERHSVASIFRVSEDHLTRLFRTHAHCGFVEFVRAERFRLAERLLADSRLSIKEVAA 315 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 ACGF S YF + FR+ +P+ +RRQ Sbjct: 316 ACGFSLSAYFIKRFRQQHGLTPAAWRRQ 343 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 13/172 (7%) Query: 112 QHVARRGPRIGSFLLQTLNEM------QMQP-------QEQQTARLIVASLLSHCRDLLG 158 Q + + + LL T+ E+ QMQ E T R + S L Sbjct: 346 QEIRQAYLKAVYLLLDTIREIDGTAYTQMQNADLLSKCTEAVTLREMEQSYRDGLALLCS 405 Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 + S + +YI E Y ++ E VA I+P YLS LF + F+ +L Sbjct: 406 PRRMKEDISNYTIKRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFL 465 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+ HAK LLKG D+KV E+A G+ D YF R+F++ SP +YR+Q Sbjct: 466 RKFRISHAKRLLKGTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4G3_9CLOT Length = 456 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 12/188 (6%) Query: 83 TTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA 142 T GF++ + +Q R I +L P+ ++ Sbjct: 280 TCLETYGKSDYAGFTLACEALLKSLEPVRQSHPGRAGNISRYLAGAFGLKDGSPEGLKSG 339 Query: 143 RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 L+ A+ S AS +E I YID YA L+ +A + +SPNY Sbjct: 340 LLMAAATFS------------ASSKDFQYEEITAYIDRHYAEDLSLTGLAGMYGLSPNYF 387 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S LF+K F YL R+ +K LL +L ++E+A G+ +++F R F+K E Sbjct: 388 STLFKKKAGCNFIHYLTSLRIAESKRLLLETNLTIREIAERVGYYSASFFIRSFKKAEEI 447 Query: 263 SPSEYRRQ 270 +PSEYRR+ Sbjct: 448 TPSEYRRK 455 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 77/163 (47%) Query: 117 RGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRD 176 +G R+ + L + + E++ + + + ++ L L + + + + + + Sbjct: 185 KGLRVSAALARQVTELRTMSLDDRGLQSVLGVFLGLADLLFDVREEQLDEAGSTVQKAIN 244 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+ + +T E A IS YLS +F+KT + F YL R+E AK LL G + Sbjct: 245 YIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELLAGTERS 304 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKP 279 + +A + D NYFC+ F+K SPSEYRRQ P Sbjct: 305 ITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQAREGQGGAP 347 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 10/175 (5%) Query: 109 LAKQHVARRGPRIGSFL----------LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG 158 + K V R + S L L + E+ ++ +L++ + + + Sbjct: 342 MKKPAVLREAEELLSLLAMFHLPGGPPLPQIREVGKLRSVEEVKKLVLQGFHALREEAMR 401 Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 + ++ + + YI R+ ++ + VA +S NY S LF++ F +Y+ Sbjct: 402 HPVPESTLHERIVLQAVRYIKARFTEPISLQEVADEVAVSRNYFSELFKRVTGHNFIDYV 461 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 RL+ AK LL L+V EVA GF D YF +LF+K +P+EY+ Q+ Sbjct: 462 IDLRLKRAKELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMVGMTPAEYQGQHRK 516 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + DF + I+ +G+ + G L GD+L G ++ + T + G + Sbjct: 29 NHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGMTNAQLHIGFR 88 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL---LQTLNEMQMQ-PQEQQTARLIVAS 148 F++ + + K+ R+ + L Q + E + P + V Sbjct: 89 N--FTLEGYSRNTFPF--KKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLILKAFVMQ 144 Query: 149 LLSH-CRDLLGSQIQT--------ASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 L+ H R+ Q++ + Q L I Y+++ + ++ +++Q YISP Sbjct: 145 LIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISP 204 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 Y+S +F++ YL RL A+ LLK ++ VK+ A+ G+ D+ YF +LF+K Sbjct: 205 AYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKY 264 Query: 260 TERSPSE-YRR 269 PSE +R+ Sbjct: 265 YGFPPSENWRK 275 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 10/252 (3%) Query: 28 NGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF 85 G P + + F L V +G+ F+ + D++ + + + Sbjct: 29 EGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHINHTEISKGSPPLS 88 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT-ARL 144 G L FS + N ++ + + E+ Q + +T Sbjct: 89 YFTVGVDGLCFSFNGHKEYRIFNCREKKT-----DLLFYFNSLFQELDRQSEGYETICSH 143 Query: 145 IVASLLSHCRDLLGSQIQ--TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 ++ L+ R + S + TA I+ Y+D Y +T + +++ +++ YL Sbjct: 144 MLDILILQLRRITDSPFELITAQHPSKECAHIKRYLDSNYGENITLDHLSELSHLNKYYL 203 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 SH F K I YLN R+E K LL+ D + ++AH GF +Y + FRK+ Sbjct: 204 SHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKSCGM 263 Query: 263 SPSEYRRQYHSQ 274 + YR+ + Sbjct: 264 TAGTYRKLKKKR 275 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 S+ D + ++ + E +YI YA L + +A ++S Y+S LF Sbjct: 415 RSVFHQIMDRISARRPQYGEA---VERACEYITLHYAEDLMLQDIADHVHLSRTYISELF 471 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 +K + +NEYL R+E AK LLK LKV + A G+ +++YF +LF+ T SPSE Sbjct: 472 KKETGMNYNEYLMQVRMEKAKELLKRQTLKVADAAALVGYSNTSYFIKLFKNYTGLSPSE 531 Query: 267 YRRQYHS 273 Y Q S Sbjct: 532 YMEQQRS 538 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 10/253 (3%) Query: 28 NGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF 85 P + + F L V EG EF+ ++ D++ V + + + Sbjct: 29 EEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASPLS 88 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ-EQQTARL 144 G + FS D K++Q H ++ + + E+ + ++ + Sbjct: 89 YYTVGVDGISFSF--HDQKEFQIF---HYHQKHADLLFYFHSLFQELDEKNDGYEEICKH 143 Query: 145 IVASLLSHCRDLLGSQIQTASRSQALFEA--IRDYIDERYASALTRESVAQAFYISPNYL 202 +A L+S R S Q E ++ Y+D Y+ + E +A +++ YL Sbjct: 144 TLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLASLSHLNKYYL 203 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 SH F + I YL H R+E K LL+ D ++ ++AH GF +Y + FRK Sbjct: 204 SHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRKYCGM 263 Query: 263 SPSEYRRQYHSQL 275 + EYRR +Q Sbjct: 264 TAGEYRRSKKNQT 276 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 110/266 (41%), Gaps = 11/266 (4%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAG 71 P + +I + N ++ +F + + +G + + + L P + + P Sbjct: 12 GRPFASERIAGVNDNMVR---SHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPF 68 Query: 72 GWN--FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + F + P + F + + + + + K A+ P I + + L Sbjct: 69 VMHHSFEENDVPFRRLLLYFNPEVIRSPQILRTLSERARVYKLPRAQSAP-IYNLMKDIL 127 Query: 130 NEMQMQPQEQ-QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 E + + L+V +L + R++ I +Y+ E + +T Sbjct: 128 QEQERDDLYSRELITLMVNALALQLVRNSDEAARPEQRNR--VTDIINYLHEHFTEDITL 185 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 E +A FY+S +L F++ + +Y+++ R+ HA+ LL+ D + E++ GF + Sbjct: 186 EQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSN 245 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHSQ 274 +F R+++ T SPS+ ++ Y + Sbjct: 246 VTHFNRVYKSVTGMSPSQNKQAYLKR 271 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 12/224 (5%) Query: 47 LEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQY 106 L+ E + + D+L ++ A + F L + Q Sbjct: 323 LKNEIISNVRYGNISNIDILLSE---LEETLKKSKADKQYI-FNLYYLMLIEINMIKAQV 378 Query: 107 QNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR 166 + + Q+ + FL + L + + + ++ + + Q S+ Sbjct: 379 LSSSSQYEQEDKLQDIEFLSEIL-KCKSISELNGVLKMSIQKTIEEV------QKHNQSK 431 Query: 167 SQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 +L + + +YI Y+ + ++ +++ F++SP+YLS LF+K ++++N R+E Sbjct: 432 MGSLIKKVIEYIKANYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFINEYRIEK 491 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 AK LL DLK EVA G D +YF R+F++ T SPSEY+ Sbjct: 492 AKELLATTDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSEYKE 535 >UniRef50_C6LB63 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB63_9FIRM Length = 517 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%) Query: 103 GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGS-QI 161 + L Q V + + Q +E M+ + QT ++ + ++ + Sbjct: 345 CRAVMLLLFQIVKALDSMMSEEMKQKTDESLMRIYQSQTLERLLRFVYGFLLEIGKNINF 404 Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 Q R + E R+Y+++ Y +T E +A+ +Y + +Y S +F+ F+ Y+ Sbjct: 405 QKEIRGVDVLEHCREYLEKHYMDEITMEMIAEKYYFNASYFSTVFKNYFGKSFSGYMTEL 464 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R++ AK L D K+KE+A G+ D+NYF R F+K +P EYR+ Sbjct: 465 RMQKAKEFLISTDWKIKEIASKTGYRDANYFIRAFKKFYGYTPEEYRK 512 >UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1Q8_9BACL Length = 542 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 29/273 (10%) Query: 3 HDVSYLLSRLINGPLSL----RQIYFASSNGPVPDLAYQV-DFPRLEIVLEGEFVDTGAG 57 + ++L +L+ SL + Y+A + Y + RLE +L + A Sbjct: 281 ESIGHVLHQLLAMNESLTKTRNRTYWAERDDLKKQTVYHPPNLTRLEELL---HQNDSAS 337 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 L + QL ++ ++ G + H Sbjct: 338 FLAETARYL---RDCLDRKTLDTSCLAL-FRLDIVQLVYAFLKLKGIE------AHKLYA 387 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 L Q+L+ ++ + +++ + + A+ +++ E I+ Y Sbjct: 388 ARANEQLLAQSLHSIED-----------MQEYVTYLVNTAMAYRDFAAEPKSVAEEIKQY 436 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I Y LTR +A+ Y++P+YL+ LF+K I Y+ R+ AK LL+ L V Sbjct: 437 IHAHYGDELTRNDLAEVVYLNPDYLARLFKKETGISLGSYVIQVRISVAKQLLETTKLSV 496 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 VA+ G+ + +YF +LF++ +P+EY++ Sbjct: 497 YAVANQVGYANYSYFSKLFKQEVGVTPNEYKKN 529 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 5/207 (2%) Query: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL 125 L + + + F V+ Q + + L Sbjct: 299 LIISGDLQALHDYFEKVGGQAGSLQLTDGKFLVINHSLALDQISEVLGLFSHQGKSAESL 358 Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERY-AS 184 LQT++++ P + A+ L Q A+ + DYI+E Y S Sbjct: 359 LQTIDQL---PGSMELKSWFKAAC-QDFETRLDRWKQQANPYVNSIQQAIDYIEEHYLDS 414 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 L+ + VA+ +++P+YLS LF+K F Y+N +L+ A+ LL+ D+K+ E+ Sbjct: 415 DLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVLLRNTDMKISEICQTV 474 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQY 271 GF DS YF +F+K+ + SPSE+R+ + Sbjct: 475 GFEDSTYFSSVFKKHFQISPSEFRQNH 501 Score = 40.3 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Query: 217 YLNHTRLEHAKTLLKG----YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 Y+N ++ A ++ DL +K+VA ++ +Y LF+K T + + Y + Sbjct: 396 YVNS--IQQAIDYIEEHYLDSDLSIKQVAENIH-LNPSYLSTLFKKETGETFTGYVNKLK 452 Query: 273 SQLTE 277 Q + Sbjct: 453 LQKAQ 457 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 14/199 (7%) Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL--LQTLNE 131 F + +A + Q L + ++ L + R + QTL Sbjct: 337 IFRKMEARSGMSPTDLQLQCLNILLSSVRKMSFRQLQQNDFLGRHILSLEGMSRFQTLES 396 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + E+ A++I ++ Q + + + +++Y+ E Y+ +T + Sbjct: 397 L-----EEWMAQVIRKIIVF-------KQEHNIPKKKDIIAEVKEYVAEHYSEPITLADL 444 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 + F+ISP YLS F++ + +L R+ AK LL+ DLKV EV G+ D+ + Sbjct: 445 SARFFISPYYLSQFFKQKTGDTYVNFLTRIRINKAKELLERTDLKVYEVCQMVGYSDTQH 504 Query: 252 FCRLFRKNTERSPSEYRRQ 270 F R+F K T P +YR++ Sbjct: 505 FARMFEKLTGYKPRDYRKR 523 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQA-LFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + L + + RS++ + + ++++R+ ++ E A+ +SP Y S Sbjct: 393 LRERALHRLGGWIDGLRERKERSRSHVLQRALLFVNQRFKEEISMEQTAEYVNLSPYYFS 452 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 LF+ F++YL R+E AK L+ G L +KE+ + G+ D NYF R+F+K+ + Sbjct: 453 KLFKLQTGENFSDYLTRLRIEEAKRLIAGRSLSLKEICYEVGYKDPNYFSRVFKKSVGIT 512 Query: 264 PSEYRRQ 270 PSEYR+Q Sbjct: 513 PSEYRQQ 519 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 171 FEAIRDYIDERYASALTRESVAQAFYI-SPNYLSHLFQKTGAIGFNEYLNHTRLE 224 E + I R +L+ + + PNY S +F+K+ I +EY +E Sbjct: 472 IEEAKRLIAGR---SLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQIEIE 523 >UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYA1_9BACL Length = 509 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 2/131 (1%) Query: 141 TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPN 200 + + +V SL++ + +GS +Q A + + +YID YA L+ +++ ++I P Sbjct: 381 SFQELVQSLVNLAEETVGSLLQDAKN--PVVHQVLNYIDSHYADELSLKTLGAQYHIHPV 438 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 YL LF K + F EY+N R+E AK LK +LKV E+A + G+ + YF + FRK Sbjct: 439 YLGQLFHKETGMSFAEYINKYRIEKAKQQLKNTNLKVHEIARSVGYWEIGYFYKQFRKYV 498 Query: 261 ERSPSEYRRQY 271 SP++++ + Sbjct: 499 GISPTDFKALH 509 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 9/171 (5%) Query: 110 AKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA 169 G I + + ++ Q AR +AS I++A Sbjct: 364 QNTSCRETGNGIQELICRIISMKSRHRI-QDIAREYLAS--------TAPLIESAKSRSP 414 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + + YI E Y+ +T +S+A+ Y+ P YLS LF++ F EYL H R+E AK Sbjct: 415 VIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEMAKDY 474 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 L+ +L++ ++ G+ YF R+F++ T +P +R + + + Sbjct: 475 LRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFREELAGKGEKHEK 525 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 3/187 (1%) Query: 96 FSVVQWDGKQYQNLAKQHVARRG-PRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCR 154 ++ ++ N A+ ++ + P LL+T+ MQ Q+ + ++ + + + Sbjct: 87 YTDFEYAKAAIANGARGYILKPVEPEEMYQLLKTVKAEWMQSQKHRKKVQLMETEIRKLK 146 Query: 155 -DLLGSQIQTASRS-QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 + L + S + +Y+++ Y ++ ES+++ +++ NY S LF+K Sbjct: 147 AEHLTDDMPVDSNGCSRVIRKALNYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGK 206 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 F +YL RLE AK LL K EVA GF +++YF +F+K +P EY H Sbjct: 207 SFVQYLTEYRLEKAKLLLAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKEYSESLH 266 Query: 273 SQLTEKP 279 E Sbjct: 267 QAEKEDK 273 >UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXH5_9BACL Length = 524 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 3/136 (2%) Query: 149 LLSHCRD--LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 LL CR+ LL + ++ + + +F+ I Y+DE + S L +++A+ F+++P YL +F Sbjct: 386 LLKLCREASLLLAGLRRKNENNTIFQVI-QYVDEEFRSKLKLQTLAKQFHMNPTYLGQVF 444 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 +K FN+YLN RLE AK LLK +K+ ++A G+ +++YF F+++ PS Sbjct: 445 KKETGKTFNDYLNEKRLEEAKRLLKRTSMKISDIALQVGYPNTDYFISKFKQSIGMLPSV 504 Query: 267 YRRQYHSQLTEKPTTP 282 Y+ ++ +K P Sbjct: 505 YKSEFQHDGPQKVKGP 520 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 5/160 (3%) Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS---RSQAL 170 V RR I ++ T +M+ + + + + SL CR+++ Q S L Sbjct: 357 VFRRFGEI--YVSDTAEDMESRFYLRISQSTTLYSLFQVCREMIDETNQVISGRLEKHDL 414 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + I YI Y S +T + +A +IS Y+S LF+ I E +N R++ AK LL Sbjct: 415 VDQISRYISANYQSNITLQDIADQIHISSAYVSRLFRNKTGITITEAINRARIDQAKLLL 474 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + KV E+A GF D+ YF +F K SPSEYR Q Sbjct: 475 GNPEYKVYEIAQMVGFEDAAYFTSVFTKYVGCSPSEYRSQ 514 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCR-DLLGSQIQTASRSQALFEAIRDYIDERYA 183 L + + +M M +E + + SL+ +L QTAS+ + E R +I E YA Sbjct: 398 LPEGVADMDMVLKESHSITALKESLIRLFEGTMLLRDSQTASKYSQVLEEARAFIRENYA 457 Query: 184 -SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 ++ +VA ISP+Y S +F + + F EYL R+E AK LL ++K E+ + Sbjct: 458 KEEISLNTVAARVNISPSYFSSIFSQEMGVTFVEYLTGVRMERAKELLMCSNMKTTEIGY 517 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 G+ DS+YF LF+K +P EYR +L Sbjct: 518 EVGYKDSHYFGYLFKKTVGCTPKEYRAGSRERL 550 >UniRef50_A4XMG0 Two component transcriptional regulator, AraC family n=2 Tax=Thermoanaerobacterales RepID=A4XMG0_CALS8 Length = 529 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + LI ASLLS + +I+ + +A +I++ Y +T ESVA+ Y++P Sbjct: 398 EKKELIKASLLSFL-NATVDKIEQIENKNLIVKAAISFIEKNYNKNITLESVAKEVYVTP 456 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 YLS LF++ I F +YL+ R++ A+ LLK +LK +VA+ GF D YF ++F+K Sbjct: 457 AYLSILFKRELKINFVDYLHKIRIQKAQELLKNQNLKTYQVANMVGFSDEKYFSQVFKKY 516 Query: 260 TERSPSEYRR 269 T +PS++R Sbjct: 517 TGLTPSQFRE 526 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%) Query: 35 AYQVDFPRLEIVLEGE---FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 + DF + ++LEGE + + + G V+ G + + + Sbjct: 29 MHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHCELQPKGTRSHQL---- 84 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLL----QTLNEMQMQPQEQQTAR--LI 145 +G + +G + +H + +L Q + E + E Q + ++ Sbjct: 85 -HIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRESSEERDEFQLMQKAVL 143 Query: 146 VASLLSHCRDLLGSQI-------QTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 + L+ R L I ++ R Q + Y++ Y +T E +AQ ++S Sbjct: 144 MEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFLS 203 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P YLS +F++ + YL RL+ AK +LK +L +KEVA A G+ D+ +F + F+K Sbjct: 204 PTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFKK 263 Query: 259 NTERSPS 265 SPS Sbjct: 264 LYGVSPS 270 >UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D691_9CLOT Length = 253 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 77/152 (50%) Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 I +LL+ +N Q ++TA+L+ +S + G + + + +YID Sbjct: 100 ICDYLLKPVNRFDFLRQLEETAKLMRREAVSDGVEGGGEGAGEGAAAADAVKRAMEYIDR 159 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + LT VA+ ++ PNY +LF+K + + YL R+E A+ LL +LKV EV Sbjct: 160 YFYQELTLAGVAKEVHMHPNYFGNLFKKKTGVSYLTYLTSVRMEKARELLDNPNLKVYEV 219 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 G+ +F ++F+K+T +P+EYR + Sbjct: 220 GQIVGYYSPKHFSKVFKKHTNMTPNEYRDRNK 251 >UniRef50_UPI0001C3678C two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3678C Length = 539 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 149 LLSHCRDLLGSQIQTAS---RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 +L + LL ++ R + + IRDY+D + L+R+ +++ +++P+YLS L Sbjct: 405 MLQYLEYLLSKAMEYKDVVERPHTIVDTIRDYMDHHFQENLSRDDLSRLVFLNPDYLSRL 464 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K + + YL R++ AK LL V ++ G+ + YF ++F++ T SP+ Sbjct: 465 FKKEMGLSISSYLIQKRIDLAKELLSTTRTPVSVISSQAGYDNFAYFTKVFKEKTGMSPN 524 Query: 266 EYRRQYHS 273 EYR++ S Sbjct: 525 EYRKKCQS 532 >UniRef50_C9A517 Helix-turn-helix domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9A517_ENTCA Length = 737 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 18/251 (7%) Query: 20 RQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 I F D V +PR E F+D L Y + + Sbjct: 502 EVIIFFDDIAAQLDNNAIVQYPREA---ESTFLDAMRSGELATIKASYTEVVREIIHENK 558 Query: 80 APATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ 139 P T S LF + Q G + +L + LN+ + EQ Sbjct: 559 NPLTIESALFKLINSIVQLGQLLGADHTSLQNSRKVYQ---------SVLNQTSLFKVEQ 609 Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + +V ++ +Q +T ++L E + + ++Y L+ +S+A+ + + Sbjct: 610 IIYQELVLPIVE------TTQAKTDREIRSLSEKMVLIVHQQYDQDLSLDSIAEQLHYNA 663 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 NYLS++F+K +I F +YL + RL+ AK L+ D+ +KE+A + +S F R F+K Sbjct: 664 NYLSNVFKKELSINFADYLQNYRLQIAKKWLRETDMTIKEIAANLQYTNSQNFIRFFKKK 723 Query: 260 TERSPSEYRRQ 270 + +P EYR++ Sbjct: 724 EQMTPGEYRKR 734 >UniRef50_C6CWF4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF4_PAESJ Length = 451 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 7/139 (5%) Query: 133 QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVA 192 + + + R V S L R+ Q ++ + + + YI + L+ E A Sbjct: 317 SDEHSDSEDQRSYVISALQRIRE------QREQQTINVMDKAKQYIGLHFTEELSLEETA 370 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD-LKVKEVAHACGFVDSNY 251 + +++P+Y S +F++ F +YL R+E AK L+ D L +KEV G+ D NY Sbjct: 371 EHVHLNPHYFSKVFKQQVGATFIDYLTGLRIEKAKQLISSADELALKEVCFEVGYKDPNY 430 Query: 252 FCRLFRKNTERSPSEYRRQ 270 F R+F++ T +P+EYR Q Sbjct: 431 FSRVFKRVTGLTPTEYRSQ 449 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 19/269 (7%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAP 81 F N + + + L ++ G + PGD++ + + Sbjct: 24 FYHWNRSIRTMHQHENCIELNFMISGNGTHIVGNEICHTQPGDIIIYDSKVMHDE----- 78 Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQYQNLAK---------QHVARRGPRIGSFLLQTLNEM 132 + L + + ++ G + L Q +A+ + + ++L + Sbjct: 79 SLMLDSLTDACCIAVTGLKRPGARPNALLPPGLHPCIPCQSIAQELCTLYHIIERSLAKP 138 Query: 133 QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVA 192 P A+ IV + + ++ A + L E +R YI++ YA AL+ +A Sbjct: 139 HGYPAANAAAQTIVHLVWQQISE---RAVRAAGQENMLMERVRSYIEQHYAEALSIRDIA 195 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 Q F+ S +Y++H F+ T +YL R+ A+TLL DL + EVA GF D NYF Sbjct: 196 QEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTLLIDTDLSLTEVASRVGFDDPNYF 255 Query: 253 CRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 R+FR+ P +RR + + ++ Sbjct: 256 SRVFRQVIGMPPGTFRRTWRAAQRKQQRA 284 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 18/265 (6%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW--QAP 81 +P F + + G + GA + G V+ + + +P Sbjct: 57 DKGPDMPSFHIHHKF-EIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIHKTASLGDSP 115 Query: 82 ATTFSVLFGKQQLG--------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLN-EM 132 ++ V F ++ L + + +L ++ I S L Q L+ E Sbjct: 116 SSRIVVNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAITVKQQNHIQSILQQMLDLEG 175 Query: 133 QMQPQEQQTARLIVASLLSHCRDLLGSQI----QTASRSQALFEAIRDYIDERYASALTR 188 + P++Q +++A+LL + L Q + S + E I+ YI + YA LT Sbjct: 176 ETSPEDQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNHIVEQIQAYIAQHYAEKLTL 235 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +A FYISP YLS LF+K+ + EY+N R++ A+ L++ + VA GF+ Sbjct: 236 TGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISSVAGQTGFMT 295 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHS 273 + +F R+F+ T SP +YR+QY Sbjct: 296 TAHFRRVFKDATGLSPQQYRQQYKR 320 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 65/126 (51%) Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 L+H + L + + + ++Q L YI Y LTR+ +A +S +YL+H F++ Sbjct: 1076 LAHLQAALERRRRLSDQAQMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQE 1135 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 EYLN R+ A+ LL D + +A GF S+YF R+FRK +SP EYRR Sbjct: 1136 LGTTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 Query: 270 QYHSQL 275 S + Sbjct: 1196 LKQSSV 1201 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 18/275 (6%) Query: 4 DVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPR---LEIVLEGE--FVDTGAGA 58 D+ YL+ + + F P + P + + L G F G Sbjct: 2 DIKYLIDYFAQASVKFTDV-FTKRMEPGEVDLGRTTAPEKCGIIVPLAGSAIFSLNGTPY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 + PG +++ T ++ + +++ + Y L +QH + Sbjct: 61 VMEPGVIVHAGPQMPIEVN-----VTSQKVWEYAVVHYNLPMEETALY-PLVEQHFLIKT 114 Query: 119 PRIGSFL--LQTLNEMQMQPQEQQT--ARLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 + +Q L E P ++ + +LL H L+ ++++ + L E Sbjct: 115 GHNTQIITQVQQLVESYSFPGNMAVFKSKTLFMNLLEHI--LIAAKVKVLDNANELMEQA 172 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YI E YA ++ +++ F I ++LF++ + ++Y+ R+ AK LL+ Sbjct: 173 LQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYGG 232 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + V E+A G+VD YF R+F+K T SPS YR+ Sbjct: 233 IPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%) Query: 127 QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASAL 186 L E + + AR I+ + C +++Q A +S+ + + +YI+ YA L Sbjct: 361 DILREQMEECISLEEARRIMEAFAGQCH---LTELQNAPKSKNI-QLAVEYINAHYAEQL 416 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 + E VA + Y++P+Y S F+ F YL RL + LL+ L+V+ +A G+ Sbjct: 417 SLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVRLSRSVWLLENTALRVQMIAQQVGY 476 Query: 247 VDSNYFCRLFRKNTERSPSEYRRQ 270 +++YF +F+K SP EYRR+ Sbjct: 477 YNASYFSTIFKKKYGMSPYEYRRK 500 >UniRef50_UPI0001C35FBC two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35FBC Length = 508 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 12/205 (5%) Query: 71 GGWNFPQWQA---PATTFSVLFGKQQLGFSVVQW---DGKQYQNLAKQHVARRGPRIGSF 124 G P++++ +L G + + D ++ +NL + R +G Sbjct: 304 GLHLPPEYESGLKKHELEEILDAIDHFGAELSKQEITDQRRVKNLMINGIVRLAQEMGQN 363 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS-RSQALFEAIRDYIDERYA 183 + + ++ + CR ++ S ++ + A YI E YA Sbjct: 364 -----TDCSREWEDVWWLTDCLCLWKEECRRIVNSYEESRNGHYSANIRKALAYIQEYYA 418 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 L E VA +PNY S +F+ + F EYLNH R+E AK L++ D+ + E+A Sbjct: 419 KDLLVEEVAAYIGKTPNYFSSIFRTEVGVTFREYLNHYRIERAKELIEESDMMIYEIAEQ 478 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYR 268 G+ D YF ++F+K T SP+ R Sbjct: 479 VGYSDYTYFSQVFKKMTGISPTSMR 503 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 E + EQ+ ++ L+ D L + + +++ +ID+R ++ + Sbjct: 119 ERAIHVSEQKERERVMKQLID---DKLINALDRHPQTREPIREAIQFIDQRLKDDISLKD 175 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 VA+ +++P+Y S LF++ + F+EYL R++ AK LL D+ V E+A CG+ + Sbjct: 176 VAEHVHLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAKELLMTTDMTVAEIAEECGYRTAK 235 Query: 251 YFCRLFRKNTERSPSEYRRQYHSQ 274 YF LF++ ++PS YR+ + Sbjct: 236 YFIHLFKEMEGKTPSSYRKSQKGK 259 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 20/254 (7%) Query: 35 AYQVDFPRLEIVL--EG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 Q LE + G G TL PG+ ++ +G + + P+ +++F Sbjct: 32 VSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHEIKSGGPSLHHAIVFN 91 Query: 91 KQQLGFSVVQWDGKQYQN-------LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR 143 L F++ + + + P +L + E+ + Sbjct: 92 PDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCA 151 Query: 144 --------LIVASLLSHCRDLLGSQIQTASR-SQALFEAIRDYIDERYASALTRESVAQA 194 L + L L + I + + SQ + + +YI E YA ++ +A+ Sbjct: 152 SLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKI 211 Query: 195 FYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCR 254 ++SPNY H F++ ++N R++ A +L +L V +VA + GF + +YF R Sbjct: 212 CFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIR 271 Query: 255 LFRKNTERSPSEYR 268 FR+ +P+EYR Sbjct: 272 KFREYKNVTPTEYR 285 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 58/112 (51%) Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 Q Q I++YI E Y+ +T +A +++P YLS +F+K +YL Sbjct: 420 QRQKDGMGSRPVRMIKEYIGEHYSENITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLI 479 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 R++ AK +L+ + + E+A G+ D +F +LF K T P+EYRR Y Sbjct: 480 DVRIDKAKEMLRNPERTIGEIACMVGYQDERHFSKLFSKMTGVKPTEYRRFY 531 >UniRef50_UPI000178A16B two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A16B Length = 546 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 13/184 (7%) Query: 96 FSVVQWDGKQY-QNLAKQHVARRGPRIGSF---------LLQTLNEMQMQPQEQQTARLI 145 S + DG +Y +NL Q V G + + L E + + R + Sbjct: 361 LSYTRPDGLKYGRNLCMQLVLAIGQLLMELGAGDPELEVMEGELTEALYAKETLKDMRGL 420 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSH 204 + S L+ + + + + R + E +R YID+ YA+ LT + +A Y+S Y+S Sbjct: 421 IESYLATVGEHI--REKRTGRVANVIERVRGYIDQNYANGGLTVADIGKAVYLSSTYVSL 478 Query: 205 LFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSP 264 LF++ EYL R++ AK LL+ K ++ +A G+ D +YF +LF+K T +P Sbjct: 479 LFKQETGQTVGEYLTKVRVDKAKELLRDPQYKFYDICYAIGYTDPSYFSKLFKKVTGVTP 538 Query: 265 SEYR 268 S YR Sbjct: 539 SAYR 542 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 21/276 (7%) Query: 22 IYFASSNGPVPDLAYQV--DFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFP- 76 ++FAS AY DF L +L G + + GD++ G ++ Sbjct: 17 VFFASKMRVTKRTAYHAHQDFTELTYILSGTSKYRIDDIYYDVKAGDMIVCNPGVFHQNM 76 Query: 77 --QWQAPATTFSVLFGKQQLGF---SVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + P F F Q + +Q + + R R+ +L NE Sbjct: 77 LLDGEEPLVEFCTGFTDFQFKNMPENTIQLSNQGHIVHLSSEAKRETSRLCYDMLAE-NE 135 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQ--------IQTASRSQALFEAIRDYIDERYA 183 + ++ L+ R+++ + +T S+S A + I +Y+ E Y Sbjct: 136 AGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFETYSKSYA-VKRIINYLMENYE 194 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD-LKVKEVAH 242 ++ + +A Y+SP Y+S +F++ YL RLE AK +L + +K +A+ Sbjct: 195 HKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEILSEREGGSIKNIAN 254 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 G+ D +F +LF+K SP YR+ +Q T + Sbjct: 255 EIGYDDVYHFSKLFKKYFGISPQNYRKSLIAQRTTE 290 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%) Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL-LQTLNEMQMQPQEQQTARL 144 SV ++ + ++ + Q VA+ RI L + NE+ +Q ++ + L Sbjct: 151 SVDILREYIDQLYLEEHDVNIISKRLQEVAKAVVRISEELGITDTNELVVQMEKLKIKYL 210 Query: 145 IVA-------SLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 + ++ L S+ +A+ DYI+ ++ E VA I Sbjct: 211 LYNNKHDAYNEIIKMVDILFDKMNIKGKLSEGGMKAVIDYIERNLKKGISLEDVANHVNI 270 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S YLS +F+K + F Y+ +++ AK +L D+ V +A + ++NYF + F+ Sbjct: 271 STYYLSKIFKKEMGVNFITYVTDRKMDLAKEMLVNTDIPVLNIALDLAYNEANYFSKAFK 330 Query: 258 KNTERSPSEYRRQYHSQLTEKPTT 281 K T +PSEYR +Y ++ E+ T Sbjct: 331 KKTGLTPSEYREKYRNRKEEENET 354 >UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=Clostridiales RepID=C5ENT8_9FIRM Length = 529 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%) Query: 142 ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + I A LLS RDL ++ + + Y+ + Y +T E+V + S NY Sbjct: 405 LKQIQARLLSEARDL------RSNEAARPIRIAKQYVMQHYQEPITLETVCEDIGFSVNY 458 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 S LF++ GF +YL R+E AKTLL+ L V E+ G+ D +F F K+T Sbjct: 459 FSTLFKRETGEGFAKYLTRVRMEEAKTLLRETSLPVAEICEKVGYSDRKHFTHTFHKDTG 518 Query: 262 RSPSEYRRQY 271 +P+EYR+ Y Sbjct: 519 LNPAEYRKLY 528 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 18/254 (7%) Query: 36 YQVDFPRLEIVLEGEFVDTGAGATLVP---GDVLYVPAGGWNFPQWQAPAT-------TF 85 +Q D L V+ G+ + AG TL P GDV+ +P + ++ A +T Sbjct: 34 HQHDAWELYYVVHGQ-GNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYL 92 Query: 86 SVLFGKQQLGFSVVQWDG--KQYQNLAKQHVARRG----PRIGSFLLQTLNEMQMQPQEQ 139 V F L + + + + A + RI +L +NEM + Sbjct: 93 MVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLS 152 Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 RL+ S L G ++ R + I Y+ + Y ++ + +A+ ++ Sbjct: 153 AMFRLLPVIFTSSDYTLAGKPMR-IERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNR 211 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 + F++ + F++++ RL A LLK V E+ + GF D +F R+F Sbjct: 212 SAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNT 271 Query: 260 TERSPSEYRRQYHS 273 SP++YR+QY + Sbjct: 272 MGMSPTKYRKQYKN 285 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 VA L + + ++ ++ S + E I Y+D Y + +A +++ P Sbjct: 394 SALHAYVAELSAAIEAHIRARASSSDASNPMSE-IVAYLDGHYFEDVGLIDMATRYHMDP 452 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 +YLS F+ + F EY+ R+E A LL+ D KV ++A G+ + YF ++F+K Sbjct: 453 SYLSRQFKAATGVNFIEYVTRKRMEKACELLRESDRKVSDIAELVGYENQRYFSQVFKKF 512 Query: 260 TERSPSEYRR 269 T ++PSE+R Sbjct: 513 TGQTPSEFRE 522 >UniRef50_UPI000178A190 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A190 Length = 540 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%) Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSH 152 QL +S ++ GK+ Q H G LQ+LN ++ E+ A L+ + H Sbjct: 367 QLVYSYLK--GKEIQA----HKLYTGKTNDQLFLQSLN--SIEDMEKYMAYLVRTAAEYH 418 Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 A S + E I+ YI Y LTR ++A+ +++P+YL+ +F+K + Sbjct: 419 AY---------AGHSHTVVEEIKHYIGCHYGEELTRTTLAEIVFLNPDYLARVFKKETGV 469 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 Y+ R+ AK LL+ L V ++A G+ + +YF +LF+++T +PS+YRR Sbjct: 470 SLGTYIIQARIRAAKHLLESTPLSVYQIAAKVGYANYSYFSKLFKQDTGWAPSDYRR 526 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQA--LFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + SLL + S++ + + + DYI E Y +T VA+ Y+S Y+S Sbjct: 410 LNSLLEEVAVRIASKVNSFNNKSIKLILRKAIDYIQEHYNEQVTLNEVAENIYVSTFYIS 469 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 +F+K F +YLN R++ AK LLK K EVA G D +YF +LF+K + + Sbjct: 470 RMFKKELGKSFVDYLNDVRIDKAKELLKDVRYKTYEVAEKVGISDPHYFSKLFKKYSGMT 529 Query: 264 PSEYR 268 PSEYR Sbjct: 530 PSEYR 534 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 17/282 (6%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVP 62 V + S +I++ N + + + + +E + G ++P Sbjct: 25 VVDSFETISFQKDSTIRIWYNEQNQNYDT--HWHNAIEIILPVENHYDVEASGQAYHILP 82 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQL----GFSVVQWDGKQYQNLAKQHVARRG 118 ++L +P+G + F LF + G++ +Q ++ K + Sbjct: 83 SEILIIPSGEMHALYAPESGKRFIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTTYPQIY 142 Query: 119 PRIGSFLLQTLNEMQMQPQ--EQQTARLIVASLLSHCRDLLG-------SQIQTASRSQA 169 + L+Q NE + E ++ +S R+ + ++ Sbjct: 143 NDVYQLLVQMRNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEYLQ 202 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 F + DYID Y LT +++A S + + LF++ F +YL + R++ A+ L Sbjct: 203 KFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEEL 262 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 L +L + E+A GF + F R+F++ +PSEYR Y Sbjct: 263 LANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYRSLY 304 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 9/167 (5%) Query: 103 GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ 162 + ++ + Q + R F L ++ ++Q V ++ + Sbjct: 120 QEVFKKIKDQPLDIEAARRSFFNLTHIDHEKLQS---------VLDMMHIVAKYILDSEM 170 Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 S + E I +YI Y +T + +A+ Y+SP YLS+LF+K I F EYL + R Sbjct: 171 IRISSLSSIEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIR 230 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 L+ +K L++ DL + E++ G D NYF RLF+K SP Y++ Sbjct: 231 LKKSKELIETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVE2_9BACL Length = 215 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 2/141 (1%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + ++ A + LS L+ +++ S + + DYI+E Y LT S+++ Sbjct: 75 DEARDAAGALQAFNAFLSEVEPLVAARVPLPSDGN--MKLLLDYIEEHYGEPLTLSSLSR 132 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 F+ +P+YLS F GF+EYLN R+ AK LL+ L + E+ G+ D +YF Sbjct: 133 HFHFNPSYLSSYFSAHNDEGFSEYLNRVRIAKAKELLRSDGLPISEIGSRVGYSDPSYFT 192 Query: 254 RLFRKNTERSPSEYRRQYHSQ 274 ++F+K SP EYRRQ ++ Sbjct: 193 KVFKKQMGLSPREYRRQQLAK 213 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 109/281 (38%), Gaps = 21/281 (7%) Query: 2 YHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG----EFVDTGAG 57 HD++ L+RL L I + + + F L V+ G F D Sbjct: 4 KHDLTKRLNRL-----KLLYIDSSRFDSDWHSTLHSHPFAELMYVVRGSGYFRFADN-LK 57 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 + D++ + + A ++ G + F + + ++ + Sbjct: 58 LPIQADDLIIINPNVLHTECSDAEGGLEYIVLGIDGVEFY---TEQNAHPGVSIHNYEDY 114 Query: 118 GPRIGSFLLQTL------NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF 171 I ++ L +EM E R++V + + LL + T ++ Sbjct: 115 KHEILFYIKAILEAGKTHDEMSELIVEN-LLRVLVLNTMRRTTSLLDVETSTGGDNKDCI 173 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + Y++ Y +T + +A +++ YLSH+F++ + +YL R+ AK LL Sbjct: 174 -FLEHYLNLHYRENITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLI 232 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 DL + +++ GF +YF + F+ SPS +R ++ Sbjct: 233 NTDLSITQISDIVGFRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 115/283 (40%), Gaps = 10/283 (3%) Query: 1 MYHDVSYLLSRLIN-GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAG 57 M ++V + N P+ L I + + + F L + +G F+ Sbjct: 1 MSNEVYEIPQFQRNHLPVKLLYITKSKYDKDWHSTIHAHHFTELLYITKGKGTFIFYKEE 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 + +++ V + + + G Q L FS + + + + + Sbjct: 61 IPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQGLSFSSI----ENPSPVTIHNYKQD 116 Query: 118 GPRIGSFLLQTLNEMQMQPQEQ-QTARLIVASLLSHCRDLLGSQIQTAS--RSQALFEAI 174 +L Q + E++ ++ + I+ LL ++ S + E I Sbjct: 117 QKNFLFYLQQLVEEVENHQEDYDLIIQNILEILLLKMMRKKSFNVEKTSTQKINKDIEFI 176 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 ++YI + + ++ +++A +I+ YLSH F+K + EYL TR+ +K LL+ + Sbjct: 177 KNYIKQHFHENISLDTLASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTN 236 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 + ++ GF ++F + F++ T SPS+YR +S + Sbjct: 237 YSISNISTITGFSSQSFFAQSFKRETNLSPSQYRNAINSSKNK 279 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 7/143 (4%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 LL+ L+ + R V +L RD S A + Y+D Y Sbjct: 375 LLRELDSLAEGEINSWAFRS-VNYVLKSVRD------NQDENSFAAIRKVLRYVDTHYDE 427 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 +T E VA ISP Y S +F++ + + +YL + R++ A+ L D ++E+ + Sbjct: 428 DITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIKKAQEWLIYSDKNIQEICYMV 487 Query: 245 GFVDSNYFCRLFRKNTERSPSEY 267 G+ D NYF R+F+K +P ++ Sbjct: 488 GYKDPNYFSRVFKKTVGVTPKQF 510 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 70/136 (51%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + Q + + L LL+ ++ ++ I Y+++ Y +T + +++ Sbjct: 401 LDEQGRLSLELCRRELLNGLTAFAALTGAGGNKEHSIMRDIARYMEQNYNREVTLQDISE 460 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 FY+S Y+S F++ +YL R+E AK LL+ +LK+ ++A G+ D YF Sbjct: 461 RFYLSREYISRRFKQEMGENVFDYLGRIRVEKAKLLLQNPNLKIAQIAEMVGYDDDKYFS 520 Query: 254 RLFRKNTERSPSEYRR 269 ++F+K +SP++YR+ Sbjct: 521 KVFKKFEGQSPNQYRK 536 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 94/260 (36%), Gaps = 11/260 (4%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGW 73 +L I + P + F L +V G EF L GD + V Sbjct: 17 KSNLIYITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNAS 76 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + + + ++ + + + P I ++ L E + Sbjct: 77 HTEKSDEKNPLEYIAVAVDNFSLNLTDTNHLMFN------CISKNPNIIKYMDSMLAEQE 130 Query: 134 MQPQEQQ-TARLIVASLLSHCRDLLGSQIQTASRSQALFE--AIRDYIDERYASALTRES 190 + I+ +L + S I T A E ++ Y+D YAS +T + Sbjct: 131 GNKAYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDD 190 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A+ ++ YL H F K YL R+ AK LL+ D + +++ + GF + Sbjct: 191 LAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQS 250 Query: 251 YFCRLFRKNTERSPSEYRRQ 270 YF + F K+ SP YR + Sbjct: 251 YFTQCFIKSCGLSPKAYRNR 270 >UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6B0_PHYPA Length = 404 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 11/246 (4%) Query: 43 LEIVLEGEFVDTGAGATLV--PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ 100 L + + G + L PG + +P G + V F + F + Sbjct: 62 LALPITGSVSLNASDGCLQAGPGHMYCIPPGSKHTYTVDK-----GVPFRCYWVRFELDA 116 Query: 101 WDGKQYQNLAKQ-HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHC--RDLL 157 + +++L A P + L + ++ AR I+ L++ R L Sbjct: 117 GSTEFFKSLQLPLSAAVDEPDQLEARYRRLISLSGNITDELRARAIIMELIAVYLQRGLE 176 Query: 158 GSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEY 217 G + +LF I +YI++ A L+ + +A+ Y+ PNY LF+ +Y Sbjct: 177 GHSSAAVASELSLFSEILEYIEQHPAENLSVDDLARQMYLHPNYFISLFRSFTGCTPIQY 236 Query: 218 LNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 +N ++EHA+ LL+ L V+++A G YF R+F++ SP YR+ Sbjct: 237 VNQRKMEHARKLLEESTLPVRDIASEVGLTGP-YFSRMFKQLIGTSPRRYRQLMEETRLL 295 Query: 278 KPTTPE 283 K P+ Sbjct: 296 KMENPD 301 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 101/254 (39%), Gaps = 14/254 (5%) Query: 28 NGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF 85 + ++ D +L ++LEGE GD+++VP G N + AT Sbjct: 19 SKDWGEVNEHPDVNKLYLILEGEGSVTCNKTEYYPEVGDIMFVPKGSLN-----SYATNK 73 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR-RGPRIGSFLLQTLNEMQMQPQEQQTARL 144 + K F L+ + + +I L L ++ + + Sbjct: 74 DKPYKKYWCHFDADILSTDIAVYLSFPLLVKNANKKISYKLFAKL--VKYHESKNPIDAI 131 Query: 145 IVASLLSHCRDLLGSQIQTAS----RSQALFEAIRDYIDERYASALTRESVAQAFYISPN 200 +LL S+ + +Q + + YIDE +T +A+ +++ N Sbjct: 132 YAKALLLRIIHFYFSECEFVKINDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNAN 191 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 YL LF T EY+ + ++E AK LL+ ++E+++ GF YF +F+K Sbjct: 192 YLCTLFSSTFGQTPIEYITNKKIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRI 251 Query: 261 ERSPSEYRRQYHSQ 274 SPS++R+ + Sbjct: 252 GYSPSQFRQSRMGK 265 >UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA9D Length = 277 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 104/284 (36%), Gaps = 18/284 (6%) Query: 1 MYHDVSYLL-SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAG 57 M + L+ + L N L L + + + L + EGE Sbjct: 1 MDINHLKLIQNYLANANLRLSIAKVDKVSQNWRFFNMRPSYNALYFIREGEGWIKIDDQE 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 PG ++ +PAG + T + K F+ +Q + HV Sbjct: 61 YRPSPGQIVLMPAGSLHSISVVNDNT-----YRKFWCHFTAKVDTLNLFQLIHLPHVLDV 115 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQT-----ARLIVASLLSHCRDLLGSQIQTAS--RSQAL 170 S++ Q E+ + I+ L+ H D++ + + S Sbjct: 116 PDE--SYMEQLFKELIDAYRSSAWTAPLQRNEILMKLVRHYLDIVPDRQISLSMLPDMQK 173 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + YI+E ++ E +A + +PNY F+ + +Y+ R+E K LL Sbjct: 174 LNTVFQYIEEHINDNVSVEQLAGLIHYNPNYFIRFFKSKMKMTPVQYIIKVRIEKTKGLL 233 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 DL ++E+ G +Y CR+F++ T SP E+R Q S Sbjct: 234 MTTDLTLEEIGRQVGME-VHYLCRVFKQFTNMSPGEFRNQIMSN 276 >UniRef50_UPI0001788F00 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F00 Length = 533 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 2/156 (1%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 L+ + E + Q + + + +G + + + + IR YI+ Y Sbjct: 379 LEPMTEWHDRNLSLQGLKRLFTDFAIESANYIGQLRK--EQHKGGIQKIRAYIEAHYHEN 436 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ + +A FY++P YL LF+K + FN++L R+ AK LL+ DL++ EVA G Sbjct: 437 ISLKGIAGKFYMNPVYLGQLFKKAYGMYFNDFLLQLRVNEAKRLLRQTDLRIYEVAERVG 496 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 F + +YF F K +PSEYR + + + T Sbjct: 497 FGNPDYFVTQFEKIERMTPSEYRNRLMKEAASEGTN 532 >UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D484_9CLOT Length = 419 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 77/141 (54%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 ++ + +A L + ++L A + + E + YID Y ++ + A++ ISP Sbjct: 275 RSYQESIAKLRENHKNLPDLPADNADKIKDYVETAKQYIDSNYIRDISLMACAESVGISP 334 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 YLSH+F++ F EYL R++ AK L + L VK+++ CG++++ YFC++F++N Sbjct: 335 YYLSHIFKEKTGSTFVEYLTAVRMDRAKELCRNQKLTVKDISDRCGYINTTYFCKVFKRN 394 Query: 260 TERSPSEYRRQYHSQLTEKPT 280 ++ YR + +E+ T Sbjct: 395 VGKTIGAYRMELLRTESERGT 415 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 106/274 (38%), Gaps = 16/274 (5%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLY 67 + P S+ I A + +P + D + V G +G GD Sbjct: 24 HGTKDNPFSIYHIENAGRSFQIP--VHWHDEFEIIYVKSGLLTVSISGESYIGKAGDAFV 81 Query: 68 VPAGGWNFPQWQ-APATTFSVLFGKQQLGF-SVVQWDGKQYQNLAKQH------VARRGP 119 V G + Q F+ LF + + F + D K + L H V Sbjct: 82 VSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAK 141 Query: 120 RIGSFLLQTL----NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 + L+ +E + + Q ++I+ + S + + + Sbjct: 142 ELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVEKEMV 201 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 YI + + ++ + + F++S Y+S F++ I ++Y+ + RLE+AK LL+ DL Sbjct: 202 SYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDL 261 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 V E A G+ + +YF R F+K SP +YR Sbjct: 262 SVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRN 295 >UniRef50_C6IWJ3 Response regulator n=2 Tax=Bacillales RepID=C6IWJ3_9BACL Length = 539 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 136 PQEQQTARLIVASLLSHCRDLLGSQI---------QTASRSQALFEAIRDYIDERYASAL 186 P+EQ T L+ + L + L +I + S+ + + + + YI E YA + Sbjct: 397 PEEQITKELVGLTGLEQLTEWLSDKITLICSSRQWRGNSKHRQVVDYMTGYIHEHYAEDI 456 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T +++ YIS N+LS +F+ FN YL R+E A+ LL ++ V EVA G+ Sbjct: 457 TLAELSEKLYISRNHLSIIFKNITGETFNNYLTRVRIEKARELLLQRNMLVYEVAEQVGY 516 Query: 247 VDSNYFCRLFRKNTERSPSE 266 + YF LF+K T SP++ Sbjct: 517 KNVPYFSTLFKKITGMSPTD 536 >UniRef50_C6CXU8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU8_PAESJ Length = 529 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 8/161 (4%) Query: 119 PRIGSFLLQTLNEMQMQ-----PQEQQTARLIVASLLSHCRDLLGSQIQTASR--SQALF 171 ++ F++Q LNE E + ++ + LL +Q+ S+ Sbjct: 363 EKLFDFIVQMLNESGFSMHHVGDLEHLHSEQLIREFAKYQIVLLINQVTNWYNLDSRGNM 422 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL- 230 E + YI + YA L+ E VA ++P+Y S LF + I F +YL R+ AK LL Sbjct: 423 EKAKSYITDHYADDLSLEVVADYVQLNPHYFSKLFHERCGITFVDYLTQVRISKAKELLA 482 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 ++ +KE++ G+ D NYF R+F+K T SPSE+R+ + Sbjct: 483 ADFEQSLKEISMRVGYRDPNYFSRVFKKLTGLSPSEFRQTH 523 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 96/270 (35%), Gaps = 11/270 (4%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLV--PGDVLYVPA 70 + L I + L + + + +G +L D++ V + Sbjct: 16 MGRRPHLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHTDDLILVNS 75 Query: 71 GGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLA------KQHVARRGPRIGSF 124 + + + T F++ G L K L +H+ R Sbjct: 76 DTLHDFKTSSSFTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHIFLRQLLKEVK 135 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF-EAIRDYIDERYA 183 LL L + E + +L+ L I++YID Y Sbjct: 136 LLAALKGEDDERCE--IGAALAQALVISVTALAEEDAGNEENPSFTMGTRIKEYIDAHYL 193 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 L +A+A +I+ YLSH F+ +Y+ R+E A+TLL ++ + ++A Sbjct: 194 EDLKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLTTNMTITDIAMQ 253 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 CG+ +SNYF +F P +YR+ + Sbjct: 254 CGYNNSNYFQSVFSNIVGMPPGKYRKAWAQ 283 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 10/218 (4%) Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDG-KQYQNLAKQHVARRGPR- 120 G+++ +PA QW + S+ Q + +++ L V R Sbjct: 96 GELMIIPAHTPQQCQWHQAVSFLSLSLEPQFFETAAYDLTQVNRFELLPNIAVQDRLIYD 155 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ------ALFEAI 174 IG+ L Q LN ++ + +V +L H +Q+ S AL Sbjct: 156 IGTALRQELNTLEF--TDHLYIDSLVTALSIHLMKRYCTQVPRLKDSSDQGLPPALLNRA 213 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +YI++ L +AQ +S Y S LF+K+ + ++Y R++ AK LL+ + Sbjct: 214 LEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGLLRQTN 273 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 + +A CGF + ++ + FR+ T +P +R QY Sbjct: 274 TPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_C6D4A8 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D4A8_PAESJ Length = 504 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 2/136 (1%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + P+ + + A L + D Q S ++A + I+ Y+ + Y + + +A Sbjct: 366 IAPESFEDWQAFAAQLRADMSDRFHKLEQGRSENKA-VDTIKAYLQKHYTEEIELQRLAD 424 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY-DLKVKEVAHACGFVDSNYF 252 Y++P+YLS LF+ +YL R+E AK LL+ LK V G+ D YF Sbjct: 425 LVYLTPSYLSKLFKTETGETITDYLTSERIEQAKRLLRDGHGLKTYMVGEMVGYADPAYF 484 Query: 253 CRLFRKNTERSPSEYR 268 ++F+K T ++P EYR Sbjct: 485 TKVFKKMTGKTPKEYR 500 >UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNH1_LACPJ Length = 275 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 101/259 (38%), Gaps = 19/259 (7%) Query: 24 FASSNGPVPDLAY-QVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQA 80 F N AY Q DF L I+LEG ++ G +V G L G + Sbjct: 15 FPFRNEHPGTYAYHQHDFLELSIMLEGYSDYNVEGQWRRVVAGQALLFNPGIHHQETQPP 74 Query: 81 PATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQ 140 + + G + + + +++ R + + Q + +P Sbjct: 75 HTQSLQLHIGFRHIALPGQVPNHLPFKDALISLDDYRAEFMANA--QRIVAESQRPTVFG 132 Query: 141 TARLIVASLLSHCRDLLGSQIQTA--------------SRSQALFEAIRDYIDERYASAL 186 A LI A ++ LL S + + QAL A Y+D Y L Sbjct: 133 HALLIQAMVIEQLCWLLRSLPENSVSNDYTELHQGNVSRDQQALVNAATYYLDVHYNEDL 192 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T +VA + ++S YLS F+ YL R++ AK LL + V++VAHA G+ Sbjct: 193 TLGTVAASLHVSAAYLSRTFKAIQGETPISYLTRLRMQRAKQLLMQEAITVRQVAHAVGY 252 Query: 247 VDSNYFCRLFRKNTERSPS 265 D YF ++F++ +P+ Sbjct: 253 QDPYYFSKVFKRYFGAAPT 271 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 20/268 (7%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNF--PQ 77 Y+ +Q D+ V+ G + GD++ + AG + + Sbjct: 23 AYYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLIVE 82 Query: 78 WQAPATTFSVLFGKQ---QLGFSVVQWDG------KQYQNLAKQHVARRGPRIGSFLLQT 128 +P +V FG Q + S+ Q K + V R I L Sbjct: 83 SGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNL 142 Query: 129 LNEMQMQPQEQQTAR-----LIVASLLSHCRDLLGSQIQTASRSQA--LFEAIRDYIDER 181 + E+ + + ++ R L+++ LL L+ + + ++ Q +YI + Sbjct: 143 VFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYIHQY 202 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y +A+ + +A A + P YL +F+ NEYL R++ AK LL D+ + EVA Sbjct: 203 YDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVA 262 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRR 269 G YF LF+K T SP+EYR+ Sbjct: 263 DHIGLNSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG6_9CLOT Length = 517 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%) Query: 109 LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ 168 L+ H+ +I S L Q +++ Q +TA + A L LG + AS S Sbjct: 350 LSSDHIQYAAFKILSSLDQDNDDLFKQAIGLRTADDLFAMLRE-----LGQSPEDASNSD 404 Query: 169 ALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 +L + Y+ + Y L+ AQ+ Y+SP+YLS +F++ + F +YL R+E AK Sbjct: 405 SLINRVAAYLSQNYPDPSLSLNKAAQSVYVSPSYLSRIFKQKLNLSFTDYLVKLRMEEAK 464 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 L K +LK ++A G+ D++YF F+K +P YR+ Y Sbjct: 465 KLCKQKELKTAQIAAKVGYRDASYFTLCFKKYFGMTPGCYRKTY 508 >UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D708_PAESJ Length = 766 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 7/211 (3%) Query: 65 VLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF 124 +L G + T K + Q G+ + K V RG F Sbjct: 556 LLQTDKGQCFDTLREITGTAIDKKLSKANIQQLFFQLSGE----IVKTLVQSRGDIAAVF 611 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQAL-FEAIRDYIDERYA 183 + + E T + + L+ C ++ + S+ + + DY+D + Sbjct: 612 GSRAAYADLIARAE--TLKDMEKCLIEMCDRIIDYHREKRSKMTDVTLQLAIDYMDANFN 669 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 + ++ ++VA+ S +YLS +F+++ + N+YL R+ A LL +L ++E+ H Sbjct: 670 NNISVDTVAEYVERSSSYLSRIFKESMGMTINDYLIQLRIRRATELLGQVNLSIEEICHE 729 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 G+ + +YF ++F+ T +P +YR+Q+ ++ Sbjct: 730 IGYANVSYFNKIFKARTGLTPGQYRQQHAAE 760 >UniRef50_UPI0001788C2F two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C2F Length = 532 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 66/129 (51%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 +T L+ +D + + ++ R L E+ + YI+E Y L+ S+A+ + P Sbjct: 390 ETPEQAERLLMQWAQDFVDNLTESGDRDATLIESAKRYIEENYMQELSLTSLAEQYNYHP 449 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 Y S +F++ + F +Y+ R++HA LL+ L V ++A GF YF F+K Sbjct: 450 TYFSEMFKEGAGVSFIQYVTEVRMKHAVRLLQETRLTVWDIAELTGFSSPGYFSSKFKKM 509 Query: 260 TERSPSEYR 268 +SPSE+R Sbjct: 510 FNQSPSEFR 518 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 19/246 (7%) Query: 36 YQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 + D+ ++IVL G +++ + G+++ + G + + +G Sbjct: 32 HTHDYTEVKIVLSGYFKYIIDDKLYEVAKGNIIIINPGVQHEKIIPSGVKVEEFNYGLTN 91 Query: 94 LGFSVVQWD-GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSH 152 + F + + + +L + P I + +T+NE Q + + L + S + Sbjct: 92 IHFKELPENFLIEPSSLPVFTLPLYQPEIIKCINETINE---QEKNEPYCDLFIKSSIMK 148 Query: 153 CRDLLGSQIQ-------------TASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 LL + S + I +Y+ Y ++ +A Y+SP Sbjct: 149 LTALLHRGMTANKERTEKTRLDIQTSEKTNIVNDILEYLSTNYMEQISLYRIAHNMYLSP 208 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 Y+S +F++ +L RL A+ LL ++ +K VA + G+ D+ YF +L++K Sbjct: 209 VYISKIFKEETGESPINHLIRIRLTKARELLMSGNMPIKTVARSVGYEDAFYFSKLYKKY 268 Query: 260 TERSPS 265 PS Sbjct: 269 YGIPPS 274 >UniRef50_C6CWB0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWB0_PAESJ Length = 530 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 7/168 (4%) Query: 105 QYQNLAKQHVARR--GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ 162 Q ++ +QH A GP L E+ P T A L CR+LL + + Sbjct: 364 QLLSVLEQHFASLMLGPLRDQLLADHWKELSSLP----TIAHYHAYALRFCRELLKAAAE 419 Query: 163 TA-SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 R Q++ E I I ERY LT E +A+ Y+SPNY+ +F++ +YL Sbjct: 420 RDLDRHQSVAEQIMKLIAERYHLPLTVEDIAKEVYLSPNYVRTIFKEKTGETILDYLTRI 479 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R+ HA LLK LKV+++AH + + +YFC +F+K+ +P+EYR+ Sbjct: 480 RMNHAAELLKDRALKVRDIAHRVSYENVSYFCSVFQKHKGSTPNEYRK 527 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 109/279 (39%), Gaps = 20/279 (7%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQ-VDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPA 70 P+ +Y + P L D L +V EG F L G+ ++V + Sbjct: 13 GNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNS 72 Query: 71 GGWN-------FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNL-AKQHVARRGPRIG 122 G + P S LF + + ++ + RR P G Sbjct: 73 GELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPG 132 Query: 123 SFLLQTLNE-MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA--------LFEA 173 LL L++ ++ EQ + L + LL L S + + R + + Sbjct: 133 MELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKT 192 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 + +YI++ YA + + +A+ +S +Y F++ EY+N R++ A + L+ Sbjct: 193 VIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQT 252 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 D K+ EVA GF +YF +FR+ +P EYR + Sbjct: 253 DAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 19/238 (7%) Query: 43 LEIVLEGE-FVDTGAGATLV-PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGF-SVV 99 + I ++ E F TG +V PG++ Y+ + N A +++LF + + F S Sbjct: 50 INITIDNELFTGTGGSFFIVNPGELHYMGSNDLN-------ADYYTILFPLEFISFQSND 102 Query: 100 QWDGKQYQNLAKQHV----ARRGPRIGSFLLQTLNEM-----QMQPQEQQTARLIVASLL 150 + ++ + HV + I + ++ L ++ + Q ++++ +L Sbjct: 103 YVENMLFKPMRSSHVILTHSLPYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEIL 162 Query: 151 SHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 S+ + ++ S + + I Y+++ Y +T +A F++S Y+S F+K Sbjct: 163 SNILSIPDILVKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHF 222 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 I F++Y+NH RL +AK LL ++ + +VA + GF + +YF R F+++ ++P YR Sbjct: 223 NITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 6/169 (3%) Query: 103 GKQYQNLAKQHVARRGPRIGSFL--LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ 160 G Q + + G ++ L E+ + QQ + + CR ++ Sbjct: 233 GTQLIAILSFTLYDSGHKLDDELPPADLSKELGLIENAQQWKAWVAEKVKRICRRFTPNE 292 Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 + + E I YI E YA + + VA YIS NYLS LF++ F +YL Sbjct: 293 ---NLKHKETVEFIIQYIHEHYAENIHLQDVADQVYISKNYLSTLFRQFTGETFGDYLTR 349 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE-YR 268 R+E AK+++ L + E+A G+ + YF LF+K+T RSP+E YR Sbjct: 350 VRMEKAKSMVLEKKLLIAEIAERVGYRNVPYFTTLFKKHTGRSPTEFYR 398 >UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM Length = 527 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%) Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASL------LSHCRDLLGSQIQTAS---RSQALF 171 + S+L + E ++ LI SL ++ R L+ ++ S ++ Sbjct: 369 VFSYLHKNGIEAHTLFSSEERDELITKSLDAVPYMFNYLRYLIQRAVEYNSFINEKDSVV 428 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + + +YI + Y+ ++R +A Y++P+YL+ LF+K Y+ RLE AK LL Sbjct: 429 DIVLNYIHQHYSEDISRTMLADMVYLNPDYLARLFKKQTQTSIINYITTYRLEKAKELLL 488 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D+ V VA G+ + +YF +LF+ +P+EYR++ Sbjct: 489 NPDIPVGTVALKVGYGNYSYFSKLFKDVVGCTPNEYRKK 527 >UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J0_9CLOT Length = 544 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 4/180 (2%) Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF--LLQTLNEMQMQPQEQQTARLIVAS 148 K+ L ++ V+ LA + +A +G + +L+ L+ ++ + R + Sbjct: 356 KEGLTYTNVKIMCLDIYMLAAKLLAEKGKDTETAVKMLERLDRQAVKNTALEEFRKYLEQ 415 Query: 149 LLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 L + S + L I Y+DE Y+ ++ ++A F+I+P+YLS LF+K Sbjct: 416 TLCVISRQFDDR--KKSSGKTLITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKK 473 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + F +Y+ R++ A LL+ L V EVA A G+ D+ YF +F K+ ++PS+YR Sbjct: 474 EMNMKFIDYITDVRIKKALVLLETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQYR 533 >UniRef50_C6D416 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D416_PAESJ Length = 513 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 56/102 (54%) Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 + + YI E YA ALT +S+ F+I PNYL LF K F +YLN R++ AK Sbjct: 410 SPVIKQALRYIHEHYAEALTLKSLGLQFHIHPNYLGQLFNKQTGDTFTDYLNKYRIDKAK 469 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 LL LKV E+A G+ ++ YF + F+K+ P +++ Sbjct: 470 ELLADSRLKVNEIARQVGYWETGYFYKQFKKHVGMVPGDFKE 511 >UniRef50_UPI0001C36BEF two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEF Length = 533 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 5/147 (3%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQI-----QTASRSQALFEAIRDYIDERYASA 185 EM+ + E V++L + + + + + + + +YI + Y+ Sbjct: 387 EMRERWSEGAGNCSSVSALTEYVTEQITADLMECVEANREKERRPVLNAAEYIKKNYSQK 446 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ E +A+ + NY S LF+K F Y+ R+E AK LL+ DL V EVA A G Sbjct: 447 ISLEEMAEQGGFNMNYFSELFKKETGKTFTAYVTEVRMEEAKKLLRDTDLPVYEVAEAVG 506 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYH 272 + DS +F + F KN P EYR+ Y+ Sbjct: 507 YKDSKFFSQQFVKNVGIKPMEYRKLYY 533 >UniRef50_C6D659 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D659_PAESJ Length = 395 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 45/118 (38%), Positives = 63/118 (53%) Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 AS S E YI Y + L+ E VA Y++P Y S LF++ GF EY+ Sbjct: 277 HYASGSDQSIEVALQYIRTHYHADLSLEKVAAIVYLNPVYFSQLFKQKTGSGFKEYVIGL 336 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKP 279 RLE AK +L LK+ +VA G+ D +F +LFRK +PSE+R+++ EKP Sbjct: 337 RLEQAKQMLLNPKLKLADVAERIGYQDMRHFSQLFRKKYGETPSEFRQRHRMDGIEKP 394 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 1/175 (0%) Query: 96 FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD 155 FS ++ Q + I + N Q+ +T L+ SL + D Sbjct: 121 FSPPVLLKQRVIFALFQIMRNFEVLISGNFKKEANLQISSLQKAETLTLLKRSLYAFFLD 180 Query: 156 LLGSQI-QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 L Q + + +Y++ Y + ESVA+ ++ +P+Y S LF+ T F Sbjct: 181 LGKELNCQKEGNGRDIMTDCGEYLENHYMDEINLESVAEKYHFNPSYFSTLFKNTYKSTF 240 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +EYL R+E A+ LL + +V+++A G+ D+NYF R F++ E +P EYR+ Sbjct: 241 SEYLIRIRMEKARELLLTTESRVRDIAVLTGYRDANYFVRAFKRYYEMTPEEYRK 295 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 6/140 (4%) Query: 135 QPQEQQTARLIVASLLSHCRDLLGSQIQTASRS------QALFEAIRDYIDERYASALTR 188 Q + ++ A + R + S +T L + ID+ Y ++ Sbjct: 334 QAYLEAVNQMAAARTMHEIRTCIDSYYETCKGRPASAGYSPLIQKALHVIDKSYKEPISL 393 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 SVA+ I+P YLS LF K + F +YL R+E AK+LL+ ++K+ + G+ D Sbjct: 394 NSVAEQLNITPQYLSRLFMKEMSRSFVDYLTSYRMERAKSLLQDTNMKINMICVQVGYQD 453 Query: 249 SNYFCRLFRKNTERSPSEYR 268 + YFC LF+K T +P++YR Sbjct: 454 AKYFCTLFKKITGVTPNQYR 473 >UniRef50_C6CWQ4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWQ4_PAESJ Length = 538 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 1/133 (0%) Query: 144 LIVASLLSHCRDLLGSQIQTASRSQAL-FEAIRDYIDERYASALTRESVAQAFYISPNYL 202 +++ +L ++ S S L E +I YA LT E A+ F+ +P+Y Sbjct: 400 MLIELMLGRLAEVHKSLTDRKQGSGELAVEQCLGWIQGHYAEDLTLEMAAEQFHFNPSYF 459 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S L + F+++L R+ AK LL G K+ E+A CG+ D+ YF R+F++ Sbjct: 460 STLMKSRTGRSFSDHLTEARIRAAKELLAGGRFKIYEIAEQCGYRDTKYFTRIFKRQVGL 519 Query: 263 SPSEYRRQYHSQL 275 SP Y+ Q Sbjct: 520 SPEAYKHTLRPQT 532 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 1/149 (0%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASL-LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYA 183 L L MQ E ++ +I +L L + S+ Q E I Y+ Y Sbjct: 122 LRTLLGMMQSAESEPESPGMIYLTLILHYVEQECRSEKQDIRPRNETVEQICAYLAANYQ 181 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 + VA FY+SP YLS LF++ +Y+N R+E A+ LL+ DL + VA Sbjct: 182 QKFSLTDVAARFYLSPYYLSRLFRRVTGQSIVDYINGRRIEAAQRLLESTDLNISAVAEQ 241 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 GF + +F R+FR+ P +YR+ + Sbjct: 242 TGFASAAHFRRVFRETMGTGPLQYRKSHR 270 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 62/110 (56%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + + + I +Y+ + Y + + +A FY+S Y+S F++ +YL R+E Sbjct: 415 QKEKNSMQRIEEYLQKNYQEDINLQEIADRFYLSREYISRKFKQDYDATITDYLTSIRME 474 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 AK LLK LK+ EVA+ G+ + YF ++F+K+ +P+EYR+ Y ++ Sbjct: 475 KAKNLLKNPYLKIYEVAYGVGYQNEKYFSKVFKKHEGVTPNEYRQSYSTK 524 >UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z3_9FIRM Length = 420 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 59/101 (58%) Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 + +++YI + LT VA F SPNYLS LF K G GF EY+ TR+ AK Sbjct: 318 QVVAQVQEYIQSHLSERLTLADVAAVFNFSPNYLSQLFGKYGDSGFVEYITETRIAAAKE 377 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +L+ DLKV E+A G+ + YF ++F+K T SP EY++ Sbjct: 378 MLEQGDLKVYEIAEKLGYESAFYFSKVFKKVTGLSPREYQQ 418 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 13/248 (5%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVL--FG 90 + D + +L GE + + G ++ + + VL F Sbjct: 31 NHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFS 90 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT-----ARLI 145 K L S + +V ++ L++M + + Q T + + Sbjct: 91 KDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQVALQAL 150 Query: 146 VASLLSHCRDLLGSQIQ----TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + LL + + S S+ I YI+ Y + LT SVAQ F++S Y Sbjct: 151 LMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQYY 210 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LS F++ F EY+N+ R+ A+ LL+ + KV +++ A GF ++F R+F++ T Sbjct: 211 LSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEVTR 270 Query: 262 RSPSEYRR 269 SP YRR Sbjct: 271 FSPLNYRR 278 >UniRef50_D2EJS9 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJS9_PEDAC Length = 368 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 17/212 (8%) Query: 75 FPQWQAPATTFSVLFGKQQLGFSV----------VQWDGKQYQNLAKQHVARRGPRIGSF 124 P+ + F ++ Q GF++ +Q + NL H A R + + Sbjct: 63 DPEHFGKSIIFPIILNNQVWGFTMCSSAKSSNHRIQVSKEYLSNLFNSHFANRQD-LTAQ 121 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR------DYI 178 +L+ L + Q+ + L + S ++ + ++ S FEAIR +YI Sbjct: 122 VLEPLTDEQLTKINYLSTLLQLKSSANNVLPIATAEDPQVRTSTEKFEAIRSIKEATNYI 181 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 E S LT +VA+ ++SP+YLS +F+K I F Y+N ++ HA+ L + Sbjct: 182 CENLTSQLTLSTVAEHVFLSPSYLSRIFKKYMDINFINYINQQKIAHAQRELILSRKPIN 241 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +++ GF ++YF ++F+K T +PS+YR++ Sbjct: 242 LISNIAGFSQTSYFTKIFKKITGTTPSKYRKE 273 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQAL--FEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + + ++ ++ + ++ E + YI + Y L+ E V++ ISP Y S Sbjct: 404 LRLWFAERIEIACRNVENKKKVTSISTVEKAKLYIRDNYQKDLSLEEVSRQVDISPYYFS 463 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 +F++ F +YL R+ AK LL + +KE+ G+ D NYF R F+KN + Sbjct: 464 KVFKEETGTNFIDYLTELRMSVAKQLLLESERSMKEIGIMVGYSDPNYFSRSFKKNIGIT 523 Query: 264 PSEYRR 269 P+EY+ Sbjct: 524 PTEYKE 529 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 105/284 (36%), Gaps = 27/284 (9%) Query: 9 LSRLINGPLSL--RQIYFASSNGPVPDLAYQVD-FPRLEIVLEG--EFVDTGAGATLVPG 63 +S + P SL + P ++ + F L +V EG FV G + PG Sbjct: 3 VSSRVLSPASLIGGSEFNCHEASPFQHPLHRHETFSELLLVEEGRGTFVVDGKPYEVGPG 62 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFS------VVQWDGKQYQNLAKQHVARR 117 VL G W+ +W + F + L + D L + Sbjct: 63 TVLLYHRGIWH-EEWSTHYPFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELG-----EK 116 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE----- 172 S + + L E+ E + A L L + S + + + Sbjct: 117 TDETASLVRECLAELHSGLAESRAAA---NHLFGLLLARLARLVPGESTERRIVKPAEAA 173 Query: 173 --AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 R YI+E Y +T E +A+ ++S YLSHLFQ+ I ++L R+E AK L Sbjct: 174 VIKARGYIEENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYL 233 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 VKE+ G+ F LF+K T +P ++R + Sbjct: 234 IMTGRPVKEIGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KE68_BACHD Length = 278 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 108/277 (38%), Gaps = 13/277 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFP----RLEIVLEGE--FVDT 54 M D++ L + +G L++ +Y + L + +P L+GE FV Sbjct: 1 MDVDLNELAGQFASGFLTVDGVYRTTLEAG-RVLGHTRAYPTPKSGFLFALKGEASFVFN 59 Query: 55 GAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHV 114 G L PG V++ PA L S D + L Sbjct: 60 GTAYHLSPGKVVHGGKN-MELIVKVGPAAFEYCLIHYTLHTRSNHPNDTDSHFLLEPGEN 118 Query: 115 ARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 + L L+ ++ P + L+ ++ + SQ + E + Sbjct: 119 LAITEK-----LDLLHRIKSTPGNFPEIQAKALFYTIFHDMLICARNRLNRESQLVIEQV 173 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +YI Y +T + +A + S+LF+K + +YL RL+ AK LL + Sbjct: 174 VEYIHHHYMEPMTVKKLADMSGMGVKPFSYLFKKYIGMFPIDYLIQYRLKRAKNLLVSSN 233 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + ++A + G++D+ YF RLF+K+ SP+ +R Q Sbjct: 234 SSIADIAESIGYLDALYFSRLFKKHIGCSPTAFRAQM 270 >UniRef50_C6CV61 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV61_PAESJ Length = 532 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 15/238 (6%) Query: 33 DLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + A + DF LE E +V G+ + +F P ++ K+ Sbjct: 309 EAAEEEDFTHTSYPLESE---KAVLQAIVKGEEALIRGSLQDFLASLQPESS-----SKE 360 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSH 152 + S+ Y++ +++V GS L + M E A L +L Sbjct: 361 NVSNSIYALYFALYRDCIERNV-NVMEVFGSGLNEIPRMMARSGLEHIVATLTDTAL--- 416 Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 + Q+ LFE+I Y+ E + ++RESVA+ Y++P Y+S+LF++ Sbjct: 417 ---KIADQLSARKNGNKLFESILAYVHEHFRLDISRESVAREVYVTPGYISYLFKQQMQT 473 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 F EYL+ R+E+A LLK L++ ++AH G+ D YF ++F+K+T +P++YR Sbjct: 474 SFIEYLHRIRIEYASRLLKDPSLRISDIAHESGYQDEKYFFQVFKKHTGMTPTQYRNN 531 >UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIX4_BACSK Length = 765 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%) Query: 99 VQWDGKQYQNLAKQHVARRGPRIGSFLL----QTLNEMQMQPQEQQTARLIVASLLSHCR 154 V+ + N Q + G R +L E P ++Q V+ L+ Sbjct: 588 VRVSFMRLLNRMLQLYQQSGLRHDQGVLLPEGTLYQECLTIPSQEQMKNWFVSRLIDPLL 647 Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 + S+ Q L E + DYI + Y A+T E A + + NYLS +F++ A+ F Sbjct: 648 SAFKQVSE--SQFQHLSEKMIDYIHQHYHQAVTLEQCAADLHYNANYLSSVFKEGTAMTF 705 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +EYL RL+ AK L VK +A G+ +S F R F+K T +P +YR+Q Sbjct: 706 SEYLAQYRLKKAKEWLAKTSEPVKTIAEKLGYNNSQNFIRSFKKMTGMTPGQYRQQKQ 763 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%) Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 +L L+ + + + + + +I E +L+ + VA+ +++PNY S +F Sbjct: 393 EKVLVDSLGLIMKEYRDMVSTTSPVQRAISFIHEHLGQSLSLQQVAKHVHMNPNYFSEMF 452 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 +K + E++ +L A LL+ K+ E+A+ G+ D YF RLF+K T +PSE Sbjct: 453 KKETGQNYIEFVTQAKLRKAMHLLRETPAKISEIANEIGYEDIKYFNRLFKKWTGLTPSE 512 Query: 267 YR 268 YR Sbjct: 513 YR 514 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 153 CRDLLGSQIQTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYISPNYLSHLFQKTGA 211 + Q+ SR + R YI + ++ LT ESVA+ +SP YLS + ++ Sbjct: 278 AYEKCKEQMVEESRLSPIVRRARQYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELG 337 Query: 212 IGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 I F L R+E A LL +L + E+A G+ +YF F+K SP++YRR Sbjct: 338 ISFIHLLTKIRMEKAAELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQYRR 395 >UniRef50_UPI0001789664 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789664 Length = 259 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 26/249 (10%) Query: 42 RLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV 99 RL + G+ + G + G++L +PAG + + P T + + VV Sbjct: 27 RLSVTTYGKCVYWVNGNKQIMEKGELLLIPAGVPYYGKS-IPTVTHTQM---------VV 76 Query: 100 QWDGK---QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR-LIVASLLSHCRD 155 QW G+ L ++ + P + + L + Q +E+ + +++ +LL+ Sbjct: 77 QWTGEPPTALSALEREEALKHKPGCYELIHERLKAIHQQWRERPSYYAMMIEALLTEVLI 136 Query: 156 LLGSQIQT---ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 + ++ E ++ YI+ Y +T+E + A +PNY + LF+ Sbjct: 137 YISRELDRGVITPEKHLHAERMKSYIERHYRERITKEELGDAIGKTPNYAAALFKSVTGQ 196 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 ++Y++ R++ A LL L V+E+A G+ D +YF R++++ T +PSE Sbjct: 197 TISQYVHAQRMKRAAYLLTESQLTVQEIAVFLGYQDLSYFYRIYKRFTGSAPSEL----- 251 Query: 273 SQLTEKPTT 281 L E+P T Sbjct: 252 --LHERPRT 258 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN--FPQWQAPATTFSVLFG 90 ++ DF L +LEGE + G L D + P + + + P + F Sbjct: 30 SHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVLYFS 89 Query: 91 KQQLGFSVVQW--DGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM--QPQEQQTARLIV 146 + + K+ + + ++ + I S LL +E+ + + + + Sbjct: 90 PDLIANDTICQLLSEKELLFVNEGYIPNQ---ILSLLLSLTHEIDVPGKYHDAYICNQLN 146 Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 LL+ R + A DYI Y ++ +A+ Y+SP +L H F Sbjct: 147 GLLLNMLRLDFEAVKSIPKTRSA---KAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEF 203 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 + +YLN TR+ HA+ L+ D + +++ GF + +F R F+K T +P E Sbjct: 204 KNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPRE 263 Query: 267 YRRQYHS 273 ++ Y Sbjct: 264 KKKLYQK 270 >UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGQ4_9FIRM Length = 535 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 1/192 (0%) Query: 83 TTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA 142 F + S V ++ L K + + + G + Q Q Q + Sbjct: 344 LHLQEDFSNDTISPSSVIDLCAKFLELLKDQIRNQYQKAGIDYDFPKKQYQAQIQNASSK 403 Query: 143 RLIVASLLSHCRDLLGS-QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 ++++L + + Q ++ ++YI + +T VA+ YI+P+Y Sbjct: 404 EDLISTLKHMIIGEISAFQKLQYTKDSRYISQAKEYIHDHLDQNITLNEVAEMLYINPSY 463 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 S LF+K F+ Y+ TR+ +K LL+ + E++ G+ DS YF ++F+K Sbjct: 464 FSTLFKKETGETFSNYITQTRIGRSKELLRDLKYSISEISAMVGYQDSKYFSKVFQKTVG 523 Query: 262 RSPSEYRRQYHS 273 PS++R+ Y + Sbjct: 524 IKPSKFRKLYTN 535 >UniRef50_C6D3W5 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3W5_PAESJ Length = 421 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 54/106 (50%) Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + + + + +Y+ YA +T E +A YIS NYL+ LF+K F Y+ R+E Sbjct: 316 EKHRKAVQYMIEYVHTHYAEDITLEQLASQLYISKNYLNQLFKKVTGETFTNYVIRVRIE 375 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LL + EV+ G+ + YF LF+K +PSE +Q Sbjct: 376 KAKVLLLEGKHLIYEVSEMVGYQNVPYFTTLFKKYCGVTPSELMKQ 421 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 +T + Q + +L R L + + Q+L RDY+ + + Sbjct: 375 WETAQDFARFSTVHQVTEHGKSEILHIVRTLQEWRT---TDEQSLMLLARDYVHDHFREP 431 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 LT + +A+ +SP Y+S LF++ + F+EY+ R+EHAK LL +KE+ + G Sbjct: 432 LTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEHAKQLLSLTQKSLKEITYEIG 491 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 + D NYF R+F+K T +SPS+YR+ + ++ T Sbjct: 492 YKDPNYFSRVFKKLTGKSPSDYRKSINGLGPKEDT 526 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 88 LFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ----QTAR 143 +F + + V++ + + + G + G + L++++++ ++ + A Sbjct: 251 IFIQSKGQLEVIKGRSLELLSFLIRTSTEYGVKFGEVIH--LSDLKLREIDEADTVEKAV 308 Query: 144 LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYL 202 L + ++ + +L+ + +S + + + + +YI + Y+ +L+ + +A+A Y+SP YL Sbjct: 309 LWLLAVGNAFIELIAER--NSSEGEGIIDRVVEYIQKNYSSESLSVKEIARASYLSPAYL 366 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 LF+K E++N R+E AK LL+ + ++ VA GF + +YFC++F+K T Sbjct: 367 GQLFKKKMGYSLTEHINKVRIEQAKLLLRQTEQTIESVAIQTGFKERSYFCKVFKKITGL 426 Query: 263 SPSEYRRQYHSQL 275 SP+EYRR+ S L Sbjct: 427 SPNEYRRKNFSPL 439 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 124 FLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYA 183 + + + E + TA ++ + + + + + + + + + + DYI E YA Sbjct: 379 YYFKAIEESRNAN----TAAELLTAFIGEAKLCIAEKAEQSGNAN--MKRLLDYIHEHYA 432 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 +L +A+ F+ +P+YLS F GF +YL+ RLE A LL+ + + E++ Sbjct: 433 ESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKASELLRAGEASISEISGM 492 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQ 270 G+ D +YFC++F+K+T SPS YR+Q Sbjct: 493 VGYSDHSYFCKVFKKHTGLSPSRYRQQ 519 >UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW7_9FIRM Length = 504 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 5/148 (3%) Query: 127 QTLNEMQMQPQEQQTARLIVASLLSHCRD-----LLGSQIQTASRSQALFEAIRDYIDER 181 Q MQ E+ A + L C +L + + ++I E Sbjct: 355 QAYRRMQESEIEKTAATALTIKTLEDCFRREIEIILSEKDKKEDIRNYTIRRAINFIREH 414 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y ++ E +A+ I+P YLS LF K I F +L R+ HAK LLKG K+ E++ Sbjct: 415 YRENISLELLAEHLEITPEYLSTLFNKEVGINFTTFLKRFRISHAKRLLKGSSKKIYEIS 474 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRR 269 G+ D YF R+F++ SP +YR+ Sbjct: 475 EEVGYHDPKYFNRVFKEEVGVSPGDYRQ 502 >UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ7_EUBSP Length = 515 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 3/140 (2%) Query: 144 LIVASLLSHCRDLLGSQIQTASRSQ-ALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 I+ + ++ +Q ++ +Q + E +I + A+AL+ E +A+ +IS ++L Sbjct: 376 FILENTVNELFQYTKNQFNGSNGTQNRIIENTIKFIHQNLATALSLEVIAEHLHISASHL 435 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S F+K EY+N TR+E AK LK ++ E+A+ G+ D+ YF +F+K T Sbjct: 436 SRTFKKYCDESLTEYVNKTRIEKAKEYLKDSNMLTYEIANQVGYNDATYFSSIFKKYTGF 495 Query: 263 SPSEYRRQY--HSQLTEKPT 280 SPSEYR++Y H +E+ Sbjct: 496 SPSEYRQKYAPHQHFSEQNK 515 >UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM8_9BACL Length = 550 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 2/136 (1%) Query: 145 IVASLLSHCRDLLGSQIQTASRSQA--LFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 +LL H + Q++ + + E I++YID Y + + F++S YL Sbjct: 415 QFEALLFHLTEYYHEQVRRSMAAGRPFSVEVIKEYIDHHYFEDIKISMFTERFFLSREYL 474 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 LF++ G +EY+ R++ AK LL LK++E++ G+ D NYF + FR Sbjct: 475 MKLFKQQYGCGIHEYVQKVRMDKAKELLDDSSLKIQEISEMLGYKDKNYFSKAFRNYYAL 534 Query: 263 SPSEYRRQYHSQLTEK 278 SPSEYR+Q + +K Sbjct: 535 SPSEYRQQQEEERGKK 550 >UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAS3_9FIRM Length = 271 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 63/108 (58%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 + R+ + + +R Y+++ Y + L+ +SV++ +ISP YLS F+K + F + L R Sbjct: 154 ESDRNALVMDHVRKYMEDNYMADLSLDSVSEILHISPAYLSAQFKKYQKMNFLDCLTELR 213 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + AK LL EVA G+ D++YF R F+K T +P++YR++ Sbjct: 214 INAAKELLADPFRSAAEVASMVGYEDASYFARAFKKRTGMTPTQYRKE 261 >UniRef50_B1YJP0 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=B1YJP0_EXIS2 Length = 234 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 6/175 (3%) Query: 95 GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCR 154 G S+++W + + + G +++ + + + I+ L Sbjct: 62 GLSLLEWTKNHHPKVVT--IVLTGYDDYTYMRRAILHQSFDYLLKPIDPDILNDALGRAM 119 Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 +L+G + + I YI YA LT + +++ FY+S Y+S F++ ++ Sbjct: 120 ELIGPVQEQGEA----IDQIAKYISTHYAEELTLQLMSERFYLSREYISRRFKQRFSVNL 175 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 ++Y+ RL AK LL D ++ E+A G+ D YF ++F+K +P+E+R Sbjct: 176 SDYIQTIRLNRAKELLGETDARIYEIALEVGYHDDKYFRKVFKKQFGMTPNEFRE 230 >UniRef50_UPI0001787D2D two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D2D Length = 535 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGS-QIQTASRSQALFEAIRDYIDERYASALT 187 ++EM+ Q T + + ++ S + + ++++ + + Y+ E Y L+ Sbjct: 390 VSEMEFQIPACATLDEVEEKAGYYLNRIIDSIENRRNNKNERIIAMCKAYLAEHYMEDLS 449 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 E VA+ F+ SP Y S F+ ++ F EYL R++ A +L+G + K+ E+A + GF Sbjct: 450 LELVAKRFFFSPAYFSSFFRSHTSMTFTEYLLKLRMDKAMQMLEGGNRKISEIALSVGFR 509 Query: 248 DSNYFCRLFRKNTERSPSEYRRQ 270 D+ YF R+F++ T SP E+R++ Sbjct: 510 DAGYFTRIFKRETGLSPEEFRKK 532 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 103/284 (36%), Gaps = 20/284 (7%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDF---------PRLEIVLEGEFVDTGA 56 S L+S LR P+ + Q RLE +L+G Sbjct: 27 SPLVSSYHAQWQGLRLDVHQQPGHETPEHSPQQHVLTVSLDQQIVRLERILDGRLQY--- 83 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPA-----TTFSVLFGKQQLGFSVVQWDGKQYQNLAK 111 + GDV +PA + +WQ+ + F + + +Q + + A Sbjct: 84 -ENIAKGDVAIIPAQTHHISRWQSETKFLVLSVEPAFFTRMVIEAGDLQKIEIKPRFAAP 142 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD--LLGSQIQTASRSQA 169 + ++ L++ ++ E T L + L +C + S Sbjct: 143 DPLVQQIGLALQTELESEHKGSSIYIESLTTTLCIHLLKHYCVTGGTILDDHHHKGLSHW 202 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 YI E LT ++ A +S Y S F+++ ++Y+ + R+E AK L Sbjct: 203 KLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCRIERAKKL 262 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 L + ++++ GF ++F +FRK +P YR Q + Sbjct: 263 LGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQVKT 306 >UniRef50_B0S295 Transcriptional regulator AraC family n=2 Tax=Finegoldia magna RepID=B0S295_FINM2 Length = 281 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 6/236 (2%) Query: 38 VDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLG 95 + F ++ L+G F+ ++P DVL V G ++ + F L ++ Sbjct: 37 LPFHQMYYCLKGNGTFIVNDKKIEILPFDVLIVNQGSKITEISKSESFEFYTL-AISEVS 95 Query: 96 FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP-QEQQTARLIVASLLSHCR 154 F Q D K ++ H+ R I ++ + L E + + + Q+ +++ L++ + Sbjct: 96 FDTEQKD-KAVLSIKHNHINDRDMVILYYINKILEEAKYKRFRYQRVCSCLISILITEIQ 154 Query: 155 DLLGSQIQTASRSQALF-EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIG 213 + +Q F + + DYI E + +T +S+++ F IS ++L H F+ Sbjct: 155 RRGDLKFTMDDPAQDSFTKHVHDYIYENFNQEITLDSISEKFMISKSHLIHEFKNNYGKT 214 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 ++L + R+E A LLK + + ++A CGF +YF + FR+ + +P++YR Sbjct: 215 PMQFLLNRRMESAMLLLKTSNKPINDIAKLCGFNSQSYFDQAFRRVVKVTPNDYRN 270 >UniRef50_C6CZ56 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ56_PAESJ Length = 519 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 11/170 (6%) Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLI------VASLLSHCRDLLGSQ-----IQ 162 + R ++ + LLQ + + + + +LS R ++ Sbjct: 349 IIRVTSKLHADLLQRNENLYELLKWDAQKAAVLFQFETIDDILSWLRRRFFELSELLYVK 408 Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 + + LF+ I ++DER +T + VA F +PNYL LF++ F+++LN R Sbjct: 409 RQKQKRKLFDNIMAFVDERLEQKITLKEVAAHFDFTPNYLGTLFKEETGTLFSDWLNERR 468 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 ++ + LL LKV E+A G+ + YF R F++ T +P EYR+++ Sbjct: 469 MDRVRELLADPCLKVYEIAERVGYKNIIYFNRQFKQFTGMTPGEYRKKHK 518 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 18/251 (7%) Query: 36 YQVDFPRLEIVLEGEF-----VDTGAGATLVPGDVLYVPAGGWNF--PQWQAPATTFSVL 88 + D + V++G+ D L GD + + AG + + ++ Sbjct: 36 HTHDRVEIMYVIDGQCEIDVATDNVNNLKLKKGDFILLDAGTVHRLIVLGEKSCRMLNIE 95 Query: 89 FGKQ---------QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ 139 F +L V+ ++ + + I L + ++ M+ +E Sbjct: 96 FSFIEDSDILTSIRLLIEKVKSIALLFEMRCPFLLLKDNNDIYHSLKNIVIQLGMESEEN 155 Query: 140 Q-TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 Q + +L+ LL + S + S S + +I Y +T + ++ I+ Sbjct: 156 QFSIQLLFYELLLKISKVAMSN-ENTSTSNIYINKAKHFISMNYDKDITIKDISSYVNIN 214 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 +YL+ +F+K EY+ R+E AK LL D+ + ++ G YF ++F+K Sbjct: 215 EDYLNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKK 274 Query: 259 NTERSPSEYRR 269 T SP +YR+ Sbjct: 275 CTGISPYKYRK 285 >UniRef50_C6CTB8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTB8_PAESJ Length = 530 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 143 RLIVASLLSHCRDLLGSQIQTASRS-QALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 R I++ + + L A RS + ++++ Y+ + Y L+ + V+ ++I PNY Sbjct: 403 RQIISVIEQQLKRLSSVLDGGAERSCDDIIDSVQQYVRQHYNEELSLQWVSDKYFIHPNY 462 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 S F++ I +N+Y+ R+E +K LLK LK+ ++ G+ D YFC +F+K T Sbjct: 463 FSKRFKQIVGISYNDYVTRVRIERSKELLKTTTLKIARISQLVGYEDQGYFCSVFKKVTG 522 Query: 262 RSPSEYR 268 SPS YR Sbjct: 523 VSPSAYR 529 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 3/170 (1%) Query: 105 QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA 164 +Y ++ + G L E Q + R + L+ Sbjct: 182 RYAHMLISELLSALEERGLMLNMDTGEEQWAQDDPLACRRQTEDKVKEMLALIKGSRNLG 241 Query: 165 SRSQALFEAIRDYIDERYA-SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 SR + + +I+E YA L+ + VA + +S YLS F+ + F +YL R+ Sbjct: 242 SRHN--IQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVRM 299 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 E A+ LL +L +E A+ GF D +F + F+K +PS YR+Q + Sbjct: 300 EKARELLAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQCKA 349 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 15/249 (6%) Query: 36 YQVDFPRLEIVLEGEFVDTG--AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 ++ + L ++EGE + + G++L +P + TF V+F + Sbjct: 21 HRHNGTELVYIVEGECENRIPFRDRKIAAGELLIIPPELEHRQIDLGFVRTFYVVFEAK- 79 Query: 94 LGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHC 153 ++N + R + S++ Q + Q Q +Q RL++ +LL+ Sbjct: 80 ---------PGVFRNDLRSIDVRSDRFVRSWMEQLVLLYQEQALDQ--CRLLLPALLARI 128 Query: 154 RDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIG 213 L GS TA L AIR +I + L +A + +SP+Y + LF K + Sbjct: 129 TRLEGSIDGTAEIPAGLAAAIR-FITYHFHRELAIREIAASNGMSPSYFNALFHKHMQVS 187 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 EY+ R+ HA+ LL+ L + E+ CG+ ++ YFCR+FRK +P EYR Sbjct: 188 PAEYIKKLRMGHARQLLRNSRLTISEIGEQCGYRNAYYFCRIFRKVHGCTPGEYRALPRR 247 Query: 274 QLTEKPTTP 282 + K P Sbjct: 248 EYDVKFLAP 256 >UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7M7_9BACL Length = 531 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%) Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 L E+Q + L+ A+ + + Q Q + ++YI Y L+ Sbjct: 389 LLQELQSLGTLSEMIGLLKANFGRWISE--SRESQIKDNVQNVIAKTQEYILSNYHKDLS 446 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 E VA+ +S ++ LF++ F EYL R+E AK +LK +KV +VA G+ Sbjct: 447 MEEVAERADLSISHFCLLFKQVTGYTFLEYLTECRIEKAKYILKNSQVKVYQVAPMVGYQ 506 Query: 248 DSNYFCRLFRKNTERSPSEYRR 269 D YF ++F+K T +P+EYR Sbjct: 507 DPRYFTQVFKKVTGMTPTEYRE 528 >UniRef50_UPI00017899D9 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017899D9 Length = 503 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Query: 146 VASLLSHCRDLLGSQIQTASR--SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + L+ +D +G + + + + + I ++I Y L+ + + ++I P YL Sbjct: 376 IDDLIKAVKDGVGGLVDSLNNDVKSPVIQQILNHIQHHYNEDLSLKVLGANYHIHPVYLG 435 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 HLF K F EY+N R+E AK LL+ KV+++A G+ ++ YF + F+K S Sbjct: 436 HLFHKETGENFTEYINRYRIERAKELLRNSSTKVQDIAKNVGYWETGYFYKQFKKFVGVS 495 Query: 264 PSEYR 268 P ++R Sbjct: 496 PRDFR 500 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 55/107 (51%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 TA S ++ + YI E ++RE VA ++P YLS LF+K +YL T+ Sbjct: 422 TALESDSVVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETK 481 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + A+ LL + V +A G+ + ++F ++F+K +P EYR Sbjct: 482 MARARQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRN 528 >UniRef50_B0P6G3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6G3_9FIRM Length = 532 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 + LA+ + G +L ++ ARL + L +L+ + Sbjct: 363 AELVRLARAYQLDTADVFGPDFAASLRLEAFDSLDELKARL--SELCLRISELIRRERSN 420 Query: 164 ASRSQALFEAIRDYIDERYASA-LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 ++R + E + +I E ++ ++ E + ++SP Y S LF+K + F +L + R Sbjct: 421 STR--GIAEGAKQFIAEHFSDPDISVEMLCDHLHVSPAYFSTLFKKETGMSFVAWLTNVR 478 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++ A LL + K E++ G+ + NYF +F+K SP++YR Sbjct: 479 MDEAVKLLSTTEDKTYEISLKVGYTEPNYFSYVFKKQFGMSPTKYR 524 >UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 Tax=Enterococcus faecium RepID=C9BAM1_ENTFC Length = 483 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 8/173 (4%) Query: 106 YQNLAKQHVARRGPRIGSFLL-----QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ 160 ++ + R SFLL + L +++ + Q ++ A + + LL S Sbjct: 307 FEQFQLAAMMPEDIRYSSFLLFMEIQRELIDLEDEEYLQGIEKIHQAKTVQELQQLLLSF 366 Query: 161 IQTASRSQAL---FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEY 217 I+ R + E + + + Y LT + V++ +++ YL LF+K F+ Y Sbjct: 367 IKKHQRQKKYSDNVEKVIVILHQHYQEPLTLKEVSENLHLNVMYLGQLFKKETKKSFSAY 426 Query: 218 LNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 LNH R+E AK LL + + E+A G+ ++ YF +LF+K RSP EYR Sbjct: 427 LNHLRMEKAKQLLLHSNQNINEIASEIGYNNTTYFSKLFKKIVGRSPKEYREN 479 >UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYL2_9BACL Length = 530 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 58/108 (53%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 + ++ EA+++ I+ Y + L +A+ ++ + +YLS LF+ F +YL R Sbjct: 419 STREEPSIVEAMKEMIELNYMNDLNLSQIAEQYHYNLSYLSDLFKTKTGKSFLQYLTDVR 478 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + A LL L + ++A GF +++YF F+K SPSEYR++ Sbjct: 479 MNKAVQLLDETPLSLSDIAELTGFSNASYFSTKFKKVFGISPSEYRQK 526 >UniRef50_C6PWF1 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWF1_9CLOT Length = 278 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 21/258 (8%) Query: 27 SNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN--FPQWQAPA 82 +A +++ L +V G+ + G + Y+ ++ P P Sbjct: 23 KQKHKKKIARKINHHELFLVTGGKGYISTENREFFVEKGMLFYLKPDVFHSIEPNLSEPL 82 Query: 83 TTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF--------LLQTLNEMQM 134 T SV F + F +W NL+ + + P + F + + L E Sbjct: 83 TFLSVHFSFICVNFCNDKW------NLSTEIEYLKFPTMQKFKNHYPLFHIFKKLVETWS 136 Query: 135 Q--PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVA 192 P + + R+I+ LL D L Q T S E I Y+ E ++T + ++ Sbjct: 137 TKLPDYEFSCRMILEELLLEIHDNLKRQ-DTNYSSTLKVEKIIKYLHENINKSITLKELS 195 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 SP+YLS F+ T E+ N +++ A+ L+ D K+KE++ GF D YF Sbjct: 196 DLVSFSPSYLSRTFKDTTGYSIIEFFNKMKIDKAEALIMVGDKKIKEISELLGFKDEFYF 255 Query: 253 CRLFRKNTERSPSEYRRQ 270 RLF+K SP E+ + Sbjct: 256 SRLFKKIKGISPKEFYNK 273 >UniRef50_B8HZZ5 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8HZZ5_CLOCE Length = 519 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 64/111 (57%) Query: 163 TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTR 222 + + EA +I++R LT ++A+ F+++ NY S LF+K G NEY+ R Sbjct: 407 NKKQMHEIIEAATVFINKRLTEDLTVFTLAEQFHVARNYFSRLFKKEMGEGCNEYITRKR 466 Query: 223 LEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 +E AK LL LK EVA G+ D+NYF F+KNT SP+E+R + ++ Sbjct: 467 IEKAKHLLTVSRLKTYEVAEQVGYNDTNYFSLAFKKNTGMSPTEFRDRQNN 517 >UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU Length = 284 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 21/251 (8%) Query: 36 YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 + DF V+ G + + +L AG ++ + + + Sbjct: 32 HCHDFIEFSYVVSGNVNYKIDDKFYLIKEKTLLPFNAGVYHHEYFTKGINSN---LKELH 88 Query: 94 LGFSVVQWDGKQYQNLAKQH--VARRGPRIGSFLLQT-LNEMQMQPQEQQTARLIVASLL 150 +GF ++ DG ++ K V + + G + L ++ + L++ SL+ Sbjct: 89 VGFRNLKIDGLPLNHILKNSSTVPMQFNQYGEDFHKCCLEIIEEHECSEIGKELVLKSLV 148 Query: 151 SHCRDLLGSQIQTASRSQAL-------------FEAIRDYIDERYASALTRESVAQAFYI 197 L + ++ + E I DY ++ Y + ++ +++ YI Sbjct: 149 MKLIALFLKETNYVKNTKKIKQYSLPFYDKSNIVEIIIDYFEKNYMNNISLNDISKNMYI 208 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S Y+S F++ YL + RL+ AK LL ++ VK +A + G+ D+ YF +LF+ Sbjct: 209 SSVYISKTFKEKTGESPINYLINLRLQKAKDLLLETEMPVKIIAQSVGYSDAYYFSKLFK 268 Query: 258 KNTERSPSEYR 268 K E SP++YR Sbjct: 269 KYYEYSPNKYR 279 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 10/249 (4%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 + L + +G + G TL GD+ A Sbjct: 28 YCVPGHTWGPGVRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLI-----TYAA 82 Query: 84 TFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR 143 + + +GF+ + Q + + + L + + + Sbjct: 83 DETDPWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCE 142 Query: 144 LIVASLL-----SHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 ++ L ++ + S S + YI Y+ ++ + +A+A +S Sbjct: 143 ALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVS 202 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 ++L +F +YL + R+ A +LLK +L + E+A + GF D YF R+F+K Sbjct: 203 RSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKK 262 Query: 259 NTERSPSEY 267 PS+Y Sbjct: 263 VKGVPPSKY 271 >UniRef50_UPI0001C368F3 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368F3 Length = 538 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 81/142 (57%), Gaps = 3/142 (2%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA-LTRESVA 192 ++ +++ R V ++ L + T +R L I Y++E + + LT + +A Sbjct: 396 LKLTDEKDIRQYVLQMVRF--TLYQVNLYTDARGNKLIHTILQYLNENLSKSTLTLKKIA 453 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 + Y++P+YLS +F++ + F +YL R+E AK LL+ +L++ E+A + G D NYF Sbjct: 454 EINYVNPSYLSRIFKEVTQMNFVDYLATLRIEKAKRLLQTGNLRIYEIAESVGISDPNYF 513 Query: 253 CRLFRKNTERSPSEYRRQYHSQ 274 +LF+K T +P++Y+ + H Q Sbjct: 514 SKLFKKYTNMTPAQYKEEIHRQ 535 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 6/176 (3%) Query: 109 LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA---RLIVASLLSHCRDLLGSQIQTAS 165 ++ V + LL+ + Q TA R + +L +L ++ Sbjct: 377 VSAVSVLEKSGYTSENLLEQYKDAQKMEIFLGTAGQAREYIKNLFGAVIELREQGME--R 434 Query: 166 RSQALFEAIRDYIDERY-ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 R L + + YI++ Y ++ VA +S ++ S +F + + F EYL R++ Sbjct: 435 RYDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRMD 494 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 AK LL+ K E+A GF D++YF LF+K +P EYR + E+ Sbjct: 495 KAKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNRSDRPEQEQEK 550 >UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 Tax=Clostridiales RepID=C7GA03_9FIRM Length = 276 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 62/116 (53%) Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 R A+ E IR YID Y ++ +SVA+ S Y +F++ F YL RLE Sbjct: 157 RMSAVAENIRQYIDMHYKEDISLQSVAEEMNYSDAYFCKIFKQCFDKSFIGYLTEYRLER 216 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 AK LL + VK+++ G+ DSNYF ++F++ +P+EYR + Q+ + T Sbjct: 217 AKQLLADVRINVKDISVNVGYRDSNYFTKVFKRAMGSTPTEYRMEILKQMNKGNTA 272 >UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecalis RepID=C2H3H7_ENTFA Length = 493 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 5/171 (2%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 + L ++R+ P + + + E T ++ +L+ ++ Sbjct: 322 RYVVFLLFSDISRQYPTVLEENYEKIVEEIRASNNLNTLYALMQQVLAEVKN-----KPK 376 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 + + I++ Y L ++VA +++P+YL +F+K F++YLN R Sbjct: 377 IKKYSESVSQAVERIEQGYLEELNLKTVADELHLNPSYLGQIFKKETKRSFSQYLNQVRT 436 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 +HA+ LL D + E++ GF ++NYF ++F+K +P E+R QY S Sbjct: 437 KHAQKLLLYTDDTINEISEKVGFNNTNYFSKMFKKLNGITPKEFREQYQSN 487 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 25/255 (9%) Query: 36 YQVDFPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 + DF +++ +G+F G + GD + + G ++ + A + Sbjct: 33 HAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHR----SKAGYSKEGLKECY 88 Query: 94 LGFSVVQWDGKQY----QNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR-LIVAS 148 + FS V + G + + + R+ + Q M + +E R ++ + Sbjct: 89 IAFSGVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKA 148 Query: 149 LLSHCRDLLGSQIQ-------------TASRSQALFEAIRDYIDERYASALTRESVAQAF 195 L L+ + + ++ + + + I Y++E Y ++ E +A Sbjct: 149 YLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANM 208 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK-GYDLKVKEVAHACGFVDSNYFCR 254 Y+S Y++ +F+ YL R+E AK +L+ + +KEVA A G+ D+ +F + Sbjct: 209 YLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSK 268 Query: 255 LFRKNTERSPSEYRR 269 LF+K+ SP Y++ Sbjct: 269 LFKKHYGISPLYYKK 283 >UniRef50_UPI0001788EC5 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EC5 Length = 524 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 12/158 (7%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGS------------QIQTASRSQALFEA 173 LQ +NE + + L + D+ + + ++++ L E Sbjct: 366 LQAMNEELYRMAGLELKNLDILLQFETMDDIFSWLRMKAMEISEMLKNRKSTKNGRLVEE 425 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 I + I R +T +A F SPNYL LF++ F++Y+ R+E A+ LLK Sbjct: 426 IIENIQARMHENITLRDMANRFSFSPNYLGVLFKEETGHNFSDYVIKLRMERARDLLKTT 485 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 LK+ E+A G+ YF R F++ +P EYRR++ Sbjct: 486 KLKIYEIASQTGYQYLPYFSRQFKEMYGMTPLEYRRKH 523 >UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BC36_9BACI Length = 515 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 73/144 (50%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 E ++ TA + L +++ I +++ + I +Y+ E Y +T Sbjct: 372 EYFKAVEDAGTASEALDVLARFIKEVDELLIPADNQNGITIKKIIEYMKEHYTEPITLTE 431 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 A+ F+ +P+YLS F F E LN R+E A LL + + E++ GF D + Sbjct: 432 AARHFHFNPSYLSSYFSAHNEGSFIEQLNKIRIEEASKLLLEGEATISEISGLVGFSDHS 491 Query: 251 YFCRLFRKNTERSPSEYRRQYHSQ 274 YFCR+F+K T SPS+Y+R+Y ++ Sbjct: 492 YFCRVFKKRTGLSPSQYKRKYFTR 515 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 3/164 (1%) Query: 105 QYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA 164 + + K++++ + L E+ + + + +L + ++ + Sbjct: 364 EIIGVIKRNLSYYAEDENFIENRELEEILKINDVDKIKFIFINTLKNLFENI---KTINK 420 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + I +I++ + +T + VA+ +S +Y S F+ F +YL + R+ Sbjct: 421 EKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTNLRVT 480 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 AK LL+ + +KEV + G+ D NYF ++F+K T +P+EYR Sbjct: 481 KAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYR 524 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 100/260 (38%), Gaps = 9/260 (3%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN 74 LR I + G + F L V+ G+ F ++ D++ + + Sbjct: 18 FKLRYISISKYEGDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEH 77 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDG---KQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + + ++FG + L F + K Y +++ N Sbjct: 78 TEKTMSNDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEFN- 136 Query: 132 MQMQPQEQQTARLIVASLLSHCRD--LLGSQIQTASRSQALFEAIRDYIDERYASALTRE 189 +P + ++ LL + L T + + YID YA +T + Sbjct: 137 -ARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLD 195 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 +A+ +I+ YLSH F + YL TRL +K LL + EVA + GF Sbjct: 196 LLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQ 255 Query: 250 NYFCRLFRKNTERSPSEYRR 269 +YF ++FRKNT SP +YR+ Sbjct: 256 SYFSQIFRKNTGMSPLQYRK 275 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 5/238 (2%) Query: 37 QVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQL 94 L +V +G ++ G T G+++ + + + + + L Sbjct: 4 HDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAIGGL 63 Query: 95 GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCR 154 + D R+ L + + + A + +L++ Sbjct: 64 RIDGLPADHLLPDGYCPVQPLRQHFAEVQSLFDAIEKEA--KSHAEIANYLTMALITKLA 121 Query: 155 DLLGSQ-IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIG 213 L + +Q ++ L R +ID+ Y A+ +A A + + YLSHLF+ + Sbjct: 122 AFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKAEIGLS 181 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +Y+ R+ A+ LL D+ + ++A G+ +SNYF +F+ + +P EYRR++ Sbjct: 182 PMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYRRKW 239 >UniRef50_UPI0001789951 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789951 Length = 539 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 5/163 (3%) Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLI--VASLLSHCRDLLGSQIQTASR--SQA 169 V + IGS + + + + + + R + + L+ + + + +++ Sbjct: 370 VLQTLMEIGSNGNELIGKEKRLLSDLYSFRSLDEIERWLNEVCEQALRDVAKTRKDIARS 429 Query: 170 LFEAIRDYIDERY-ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 D+I Y L+ ++V ++S +Y S LF+ F EY+ R+E AK Sbjct: 430 QMLEAVDFIQRHYEDEELSIKTVCSRIFMSTSYFSALFKSHTGKTFVEYVTEVRMEKAKE 489 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 LLK LK E+A G+ D YF LF+K+T +P+EYR + Sbjct: 490 LLKHSLLKTYEIAAKTGYQDPQYFSVLFKKHTGDTPTEYRNKM 532 >UniRef50_C6D5X4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5X4_PAESJ Length = 533 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT--ASRSQAL-------FEAIR 175 L L Q E+ ++ L + +Q+Q+ A+R +AL R Sbjct: 380 LHAMLFASQTLTAEKLHKEIVYFDSLWGLFEWFHTQLQSYIAAREEALPVSKRREVSEAR 439 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 Y+ ++ E VA +++P+Y S F+K + F EY+ ++E AK LL + Sbjct: 440 KYVSMNLGKRISLEEVAAHLHMNPSYFSRFFKKETGLTFIEYVTDQKIERAKELLDQTNY 499 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 V E+ G+ + +YF + F+ T +P+EYR Sbjct: 500 YVSEICEMLGYDNQSYFIKTFKAQTGLTPTEYR 532 >UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepID=A8FI25_BACP2 Length = 472 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 59/120 (49%) Query: 151 SHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 C + L + +++ E + YI + +T E A +SP Y + F+ Sbjct: 349 RQCCEHLFDVYEARTQTVNDMERAKRYIKTHFCEQITLEQTAAYVDLSPTYFTKRFKDVT 408 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + F EY+ + RL+ K LLK L +KE+ + G+ D NY R+F+K SP EYR+Q Sbjct: 409 GLTFKEYVTNCRLDKIKKLLKDSSLSLKEITYQAGYTDPNYVSRVFKKMVGCSPKEYRKQ 468 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 8/188 (4%) Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT 141 + +FG+ L + +++ + I + + LN + E T Sbjct: 333 HKLYVEVFGENNLKYKMIKLIIMLLLETGAINKEESFD-IEKVITEILNADAHRILE--T 389 Query: 142 ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 ++ + +L + + I S D+I++ Y ++ ++ F +P Y Sbjct: 390 SKRAILALFGNAKVTHEQIIHNDS-----INKAIDFINQNYNQEISLAQISAIFNFNPYY 444 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 S LF+K + + YL R++ A LLK +KE+A GF D NYF + F+K Sbjct: 445 FSKLFKKYTGVSYKTYLTKLRIQKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVG 504 Query: 262 RSPSEYRR 269 +PS +R Sbjct: 505 VTPSFFRN 512 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 4/160 (2%) Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT--ASRSQALFEAIRDYIDE 180 +L + + +TA + A L+ D + + + + + +Y+ Sbjct: 262 DTILDMNSRCFSESDHLRTAEEL-ALWLTRMTDRFTDTVFSLVEVKHRDIICKAIEYLKR 320 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 +T E A +SP+Y S +F++ FN YL R+ + +L D + E+ Sbjct: 321 NCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGRAMLLDTDASIAEI 380 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYR-RQYHSQLTEKP 279 CGF D +YF ++FRK T +P +R R+ + E+P Sbjct: 381 CDRCGFDDQSYFTKVFRKYTGVTPGRFRARRGRPENGEEP 420 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 97/257 (37%), Gaps = 26/257 (10%) Query: 36 YQVDFPRLEIVLEGEFVDTGAGATLVP---GDVLYVPAGGWNFPQW-------QAPATTF 85 ++ D L V+ G + AG TL P GDV +P + ++ Sbjct: 34 HRHDAWELYYVVHG-YGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVRYL 92 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI--------GSFLLQTLNEMQMQPQ 137 V F S+V+ + L + P + + L++M + Sbjct: 93 MVAFSH-----SLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDE 147 Query: 138 EQQTARL--IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 + + ++ ++ + + R + I Y+ Y ++ + +A Sbjct: 148 LGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEV 207 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 ++ + F++ + F++Y+ RL A LLK +V E+ GF D +F R+ Sbjct: 208 GMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRV 267 Query: 256 FRKNTERSPSEYRRQYH 272 F+ SPS+YRR++ Sbjct: 268 FKNTLGMSPSKYRRRFQ 284 >UniRef50_D1PQV2 Putative two-component response regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQV2_9FIRM Length = 530 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 57/118 (48%) Query: 155 DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGF 214 +L Q + +Y+ + YA +T E VA +P Y S +F++ F Sbjct: 413 ELQTLHEQQLRQEDRPIRVAMEYVQKHYAEHITLEDVAAMSGFNPTYFSDVFKRKSGKNF 472 Query: 215 NEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 ++YL R+ AK +L+ V EVA A G+ D+ YF + F + P+EYR+ Y+ Sbjct: 473 SDYLTEVRMAAAKEMLRNTRKTVYEVAEAAGYKDAKYFSQQFARYAGMKPTEYRKLYY 530 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 3/140 (2%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 E+ + +E+ + + L + ++ A + Y++E +T Sbjct: 117 ELAFRKEEELNR---IERMERFVDTKLLETTEQETQYSAPVKEAIQYLEEHLHEPVTMRD 173 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A +++ +Y S LF++ + F++YL R++ AK LL L + E+A G+ + Sbjct: 174 IADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRAKELLTNTRLSINEIAEKAGYQTAK 233 Query: 251 YFCRLFRKNTERSPSEYRRQ 270 YF ++FR + SP +YR+ Sbjct: 234 YFVKVFRSHEGVSPGQYRKN 253 >UniRef50_C6CY25 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY25_PAESJ Length = 535 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 8/156 (5%) Query: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 H + + L++++ Q ++ A LL H + S + Sbjct: 371 HDQQHVVHLKKQYFDQLSKLETIEQSRRWFLQAFAELLEHMIRIYNSDRNS-------II 423 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 +I + Y ++ +S++ ++S NY ++LF+K F EY+ R+E AK LL G Sbjct: 424 KATQFIQQHYQQEISLQSISHFVHLSKNYFANLFKKEVGESFLEYVTRVRIEKAKALLAG 483 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++K +V G D YF ++F+K T +PSEYR Sbjct: 484 -EMKAVDVGQMVGIQDPKYFSKVFKKITGATPSEYR 518 >UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSM7_9BACI Length = 550 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 105/270 (38%), Gaps = 14/270 (5%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLE---GEFVDTGAGATLVPGDVLYVPAGGW 73 L LR + F NG + Q+ + IV++ G L P V G Sbjct: 22 LRLRDMQFIKGNGNWR-MEQQLTVSHVLIVVKSGQGRLTLDHDEYQLRPDTVYVCAPGET 80 Query: 74 NFPQWQAPATTFSVLFGKQQL-----GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 + + + LF G+ VQ K+ K + L Sbjct: 81 YGIEAEKASQLKLFLFKFDVFQVTEQGYERVQGIKKERLFPLKGEIQISPAGQLVSLCDA 140 Query: 129 LNEMQMQPQ--EQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASAL 186 + + E+ ++ LL + + ++ A S+ E ++Y++ + L Sbjct: 141 IYDHWRSEDGLERFYSQFAFQELLYYI---MKNRRLQAKESRTSLELAKEYMERYFNENL 197 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T E +A+ ISP Y LF+KT I +YL R+ AK L+ D K++++AH G+ Sbjct: 198 TIEQLARIANISPKYFVDLFKKTYGISAIDYLTELRINKAKQLMAQSDAKLRDIAHQVGY 257 Query: 247 VDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 D YF R F+K +P+ Y + ++ Sbjct: 258 NDEFYFSRKFKKKVGVTPTVYMKSRRRKIA 287 >UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDJ0_9FIRM Length = 517 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 75/145 (51%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 L LN + + E Q + ++++ + S+ + R YI+E Y Sbjct: 371 LSELNALDNRLIESQWYSELKKRSAELIKNIIAFREIADSQETDPLDESRRYIEEHYQDE 430 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ E +A ++ + +Y S LF++ I F+EYL+ R+E A+ LLK KV+++A G Sbjct: 431 ISLEQIAALYHFNASYFSTLFKQRFGISFSEYLSDIRMEKAENLLKTSSDKVRKIALEVG 490 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ 270 + D NYF R F+K +P E+R++ Sbjct: 491 YKDPNYFNRAFKKRHNMTPEEFRKR 515 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Query: 42 RLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVL--FGKQQLGFS 97 + ++ GE + ++ GD++ + + ++ F LG Sbjct: 41 EIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGDPEHERIVINFSDSFLGKG 100 Query: 98 -VVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQ-----TARLIVASLLS 151 + G + + R + ++Q LN+M + +E+ ++++ LL Sbjct: 101 HPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADEIRERSASYEHMLQVLLTELLI 160 Query: 152 HCRDLLGSQIQTASRS-QALFEAIRD---YIDERYASALTRESVAQAFYISPNYLSHLFQ 207 L S A+ S L + I D +I YA +T + +++ FYISP YLS +F+ Sbjct: 161 KTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKITLQGLSETFYISPFYLSRIFK 220 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + YLN TR+ A+ LL DLK+ ++A + GF +F R F+K + S+Y Sbjct: 221 EITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGFESLTHFDRTFKKIMNMTASQY 280 Query: 268 RR 269 R+ Sbjct: 281 RK 282 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 13/250 (5%) Query: 36 YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVL--FGK 91 + + L +L GE + + T G ++ + + +L F Sbjct: 30 HVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINFSH 89 Query: 92 QQLGFSVVQWDGKQYQNLAKQHV----ARRGPRIGSFLLQTLNEMQMQPQ--EQQTARLI 145 + + + Q+ R + L++ E +++ + E L+ Sbjct: 90 DFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVRALL 149 Query: 146 VASLLSHCRDLLG---SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 L + R L G +Q + I YI+ + +T + +A FYISP+YL Sbjct: 150 FQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPSYL 209 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S +F+K EY+ H R+ AK L+ D K+ ++A GF ++F ++F++ Sbjct: 210 SRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIVGI 269 Query: 263 SPSEYRRQYH 272 P +YR++ Sbjct: 270 PPLQYRKKSR 279 >UniRef50_A1HM14 Two component transcriptional regulator, AraC family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM14_9FIRM Length = 247 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 76/150 (50%) Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 I + + Q + + ++P E + + + L R + ++ + + + Y+ E Sbjct: 91 IQNAIRQGVCDYLLKPVELPAMKECLENWLQRRRREAAAAAGPEEQALSPIQQVLRYMAE 150 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + A+ +++P+YLS LF++ + F +Y+ +++ AK LL L++ E+ Sbjct: 151 TPLGDINLTDAARRVHMNPSYLSQLFKQEMQVCFVDYVTDLKMKEAKRLLATTTLRISEI 210 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A G+ D YF +F+K+T SPSEYR+Q Sbjct: 211 ADRLGYADLAYFSNIFKKHTACSPSEYRKQ 240 >UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 Tax=Ruminococcaceae RepID=C6JAN7_9FIRM Length = 291 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 14/234 (5%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ 107 EGE + G +L GD +++ L+ + F + Sbjct: 64 EGELICEGRTYSLRTGDCVFIDCRKQYAHSSSEK------LWSLSWIHFYGPNMTAIYDK 117 Query: 108 NLAKQHVARRGPRIGSFLLQTLNEM-QMQPQEQQTARLIVASLLSHCRDLL-------GS 159 L + A P S L+ + + ++ + + + S L++ LL G Sbjct: 118 YLERGGRAVFHPVSVSGFLEICHRIYELADSDDYIRDMKINSELNYLLTLLMNESWHPGE 177 Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 + + A + ++ Y+DE Y ++ + +A+ F+IS YL+ +F++ + + YL Sbjct: 178 KHRDADLKKQNVLPVKQYLDEHYQEKISLDFLAEHFFISKYYLTRVFREQFGVSISSYLM 237 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + R+ AK +L+ + K+K + + CG + +YF R+FR+ SP EYR ++ Sbjct: 238 NRRVTKAKYMLRFSNEKIKTIGYKCGLGEPHYFSRVFRQMEGMSPLEYREKWEK 291 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 2/148 (1%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGS--QIQTASRSQALFEAIRDYIDERY 182 L Q + ++ Q A + + + + L+ + +Q + + + YI++ Sbjct: 176 LRQAYFDTKVVSTRQHEAIVSLLEIFAQHISLVSNWVLVQERNAEPPVIARAKRYIEDNQ 235 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 A LT VA+A S Y +F+K + F EY++ R+E AK LL +L+V EVA Sbjct: 236 AEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPNLRVSEVAF 295 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 GF +F R+F+K +SP+EYR Q Sbjct: 296 EVGFQSLTHFNRVFKKIVGQSPTEYREQ 323 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 114/279 (40%), Gaps = 14/279 (5%) Query: 4 DVSYLLSRLINGPLSLRQIYFASS--NGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGAT 59 ++ YL+ + +Y S A+ F + + EG F + Sbjct: 3 NIRYLIDDKNFSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVN 62 Query: 60 LVPGDVLYVPAGGWNFPQWQ-APATTFSVLFGKQQLGFSVVQWDGKQYQ--NLAKQHVAR 116 + D++ + + + + ++ G + + +++ + HV Sbjct: 63 VKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVIN 122 Query: 117 RGPRIGSFLLQ---TLNEMQMQPQEQQTARLIVASL--LSHCRDLLGSQIQTASRSQALF 171 L Q ++E++++ + + A + SL L+ R + I + Sbjct: 123 LKKNSSIILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNL 182 Query: 172 E--AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 E I++Y+D Y+ +T E+++ Y++ L H F K + YL R+ AK+L Sbjct: 183 ECAKIKNYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSL 242 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L+ + +K++ GF +S+YF ++F+K T SP +Y+ Sbjct: 243 LETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_UPI000178A031 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A031 Length = 260 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 10/248 (4%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 ++ F L V+EG + G + GD++YVP G + Sbjct: 20 KCYPDWKIQKSRIGFHDLTFVVEGRANYYINGKKFAVEAGDLIYVPGGSVREAHTCKESP 79 Query: 84 TFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ-TLNEMQMQPQEQQTA 142 + F + + + K+ + + I S++ + L M QP A Sbjct: 80 MHAYPFNFFWAE--PHNYIRLPFGVVTKKLITK---EILSYIREFNLVWMNKQPFYMIHA 134 Query: 143 RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 R + +L + Q + + +I+E YA LT A+ + P YL Sbjct: 135 RALFELILHRLLRCMHRQTTML--MDPRIKKLTAFIEEHYAEDLTLNDFAEQLNLHPVYL 192 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 LF+ + EYL R+ +A+ +L + V E A CGF D +YF ++F+++ Sbjct: 193 GKLFKLNTGSTYKEYLQRVRVNNAEIMLATGNCTVTEAAECCGFYDLSYFSKVFKESKGY 252 Query: 263 SPSEYRRQ 270 PS +R Sbjct: 253 PPSAIKRH 260 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 98/247 (39%), Gaps = 36/247 (14%) Query: 53 DTGAGATLVPGDVLY---------------VPAGGWNFPQW-----QAPATTFSVLFGKQ 92 L PG +L P W +A A L + Sbjct: 293 LRDERFFLGPGQILVAGDVKPGYRYGTLPPFPEQAWLEALQQLRSEEAEAMLHDYLINVR 352 Query: 93 QLGF---SVVQWDGKQYQNLAKQH-----VARRGPRIGSFLLQTLNEMQ-MQPQEQQTAR 143 QL V +W L +Q + P + L Q++ + Q +Q E R Sbjct: 353 QLRIDKSLVYEWAIDLLDRLEEQIHSPSLNGQAEPVKRAALYQSVYDCQTLQEIEAAIWR 412 Query: 144 LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 +H +LL + ++ L + ID Y +T +S++ Y+SPNYL Sbjct: 413 AA-----AHYLELL--MERATDKNAKLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLR 465 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 +F+ + ++YL RLE AK +L LKV+++A G+ ++YF LF KN + Sbjct: 466 SIFRDKTGMTIHDYLTRIRLEKAKEMLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVT 525 Query: 264 PSEYRRQ 270 P+EYR+ Sbjct: 526 PNEYRKN 532 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 56/123 (45%) Query: 151 SHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 C + S + +A DYI A L+ +A +S +LSHLF+K Sbjct: 208 ESCETETPRLEPSKSPRSRIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEM 267 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + ++ RL+ A+ LL L V E+A+ GF D NYF + FR PSEYR Sbjct: 268 GMTLTAFIKSLRLKKARELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYRSH 327 Query: 271 YHS 273 HS Sbjct: 328 RHS 330 >UniRef50_UPI0001C36B1C two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B1C Length = 505 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 +T R IV L H ++ ++ RS + E + YI + Y L E++A+ F + Sbjct: 368 RTLREIVNFLTEHITGII--RMVHEVRSDNIIEKLCGYIGKNYRQPLKIETLAEVFGYNG 425 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 +YL LF++ F+ YL+ R+E AK LL D ++ VA CGF + YF F+K Sbjct: 426 SYLGKLFKQETGESFHSYLDRVRIEKAKKLL-ETDARIYSVASECGFQSNEYFSNKFKKY 484 Query: 260 TERSPSEYRR 269 SP YR+ Sbjct: 485 VGVSPQAYRK 494 >UniRef50_B8I3I7 Two component transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=B8I3I7_CLOCE Length = 544 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 2/127 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + S + + + ++R++ L ++DY+D Y+ +T S+++ F IS YLS L Sbjct: 418 LLSFFYKVNEYINR--KRSNRNEKLLSKVKDYVDRNYSENITLTSISKDFGISSGYLSVL 475 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F F +YL + R+++AK LLK DLK+ E+A G+ D+ YF F+K+ +P+ Sbjct: 476 FNDYIGQNFIDYLTNLRIQNAKNLLKSTDLKIYEIADRVGYRDAYYFSTAFKKSVGINPT 535 Query: 266 EYRRQYH 272 +YR + + Sbjct: 536 DYREKLN 542 >UniRef50_A6NRT4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRT4_9BACE Length = 534 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%) Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS-ALTRESVAQAFYI 197 ++ R ++ L R+LLG Q + E + +I YA L+ ES+ ++ Sbjct: 402 EELGRWLLERCL-KLRELLGR--QRTDSAWKTVEQAKAFIAANYADCDLSVESMCAHLHL 458 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S Y S LF++ F Y+ R++ A +L+ D K +A G+ D NYF +F+ Sbjct: 459 SATYFSALFKRETGQSFTAYVTELRMDQAARMLRDTDEKTYLIAEKTGYTDPNYFSYVFK 518 Query: 258 KNTERSPSEYR 268 ++ +PS+YR Sbjct: 519 RHFGVTPSKYR 529 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 38 VDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ--- 92 D L V +G EF L GD+L + + + ++ G Sbjct: 31 HDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAEFIVMGFYLKP 90 Query: 93 ---------QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR 143 + + ++ H+ R+ + L L E + + Sbjct: 91 ESKSKIEALKEIYGFLESLENISSPFYFIHI-RKRSNVFFCLESILQEAKENKKGLLLYI 149 Query: 144 LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 + + R++ +I+ + + I+DYID+ Y + +A+ ++S + +S Sbjct: 150 KSIELFIYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAKKLFMSESSIS 209 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 LF+ I EYL R+E AK L +LK+ E+A CGF F +F+K T S Sbjct: 210 RLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFNDIFKKYTGCS 269 Query: 264 PSEYRR 269 P+ YR+ Sbjct: 270 PTHYRK 275 >UniRef50_Q9KDT8 BH1123 protein n=1 Tax=Bacillus halodurans RepID=Q9KDT8_BACHD Length = 526 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 6/167 (3%) Query: 103 GKQYQNLAKQHVARRGPRIGSFLLQTLN---EMQMQPQEQQTARLIVASLLSHCRDLLGS 159 G + + + G I + + + Q Q+ R + + C Sbjct: 358 GIEIWTIITYSLYDIGILIQEMFDEDFDLAQHLTKQGNWQEWIRFLCEQIEHIC---YHQ 414 Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 Q + + L E + YI++ A +T + +A YIS NYL +F+K F Y+ Sbjct: 415 QWDENIKHKQLIEQVMIYIEKHLAENITLQDIADELYISRNYLGQIFKKVVGESFKNYVT 474 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 R+E AK +++ + + EV+ G+V+ YF +F+K T +P + Sbjct: 475 RLRMEKAKKMIQEGNFLIYEVSEKVGYVNPAYFTTMFKKYTGYTPRD 521 >UniRef50_C6D078 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D078_PAESJ Length = 544 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 12/182 (6%) Query: 99 VQWDGKQYQNLAKQHVARR---GPRIGSFLLQ------TLNEMQMQPQEQQTARLIVASL 149 +Q G + ++ +R IG Q ++ + +E++ + + + Sbjct: 356 LQMHGAELRSFCMHLTSRAYQVASDIGEANRQFGSEQKLWEQLLLCREERELLQETIR-I 414 Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 + + + + S +Q + + +Y+ Y L+ SVA++ ++SPNYL LF+ Sbjct: 415 IKEISEFIADR--RMSHAQIVVQKAIEYMCAHYKENLSLRSVAESVFLSPNYLGALFRTE 472 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 F + L R++ AK +LK + K+ EVA G+ + YF LF++ T SP EYR Sbjct: 473 LGESFTDQLIRIRIQRAKDMLKNPEFKLYEVADQIGYQNMGYFTGLFKRMTGLSPKEYRD 532 Query: 270 QY 271 + Sbjct: 533 LH 534 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 20/251 (7%) Query: 36 YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN--FPQWQAPATTFSVLFGK 91 + DF + V EG + GD+ +P G + P Q + Sbjct: 34 HTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIFR 93 Query: 92 QQLG---FSVVQWDGKQYQNLAKQH-------VARRGPRIGSFLLQTLNEMQMQPQEQQ- 140 L SV+ K + L + + S + E + + Sbjct: 94 TCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYEF 153 Query: 141 --TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 +LI + + GS + T + + + YI++ +A+ LT + VA+ ++S Sbjct: 154 LMMGQLIQVLAMLQRYECDGSMVSTPTNN---MDDAIQYINDHFATNLTVQQVAERSFMS 210 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P++ LF+KT + F ++L + R++ LLK ++ ++E A+ G+ D +F LFRK Sbjct: 211 PSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRK 270 Query: 259 NTERSPSEYRR 269 T +P EYRR Sbjct: 271 KTGVTPREYRR 281 >UniRef50_B6FKZ8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ8_9CLOT Length = 540 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 3/145 (2%) Query: 127 QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYA-SA 185 + L +M + + V LL+ +L ++ R L A + I+ Y Sbjct: 395 EELQKMMQKIHSLSEIKKYVVRLLNEAIEL--RDAESGRRYSDLIAAAKKEIENHYMTEE 452 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ +VA + +SP+Y S +F K F EYL R+E AK L +K E+ + G Sbjct: 453 ISLNTVAISVGMSPSYFSSIFSKEAGKTFVEYLTEVRIEKAKEFLMCSSMKTSEIGYEVG 512 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ 270 + D +YF +F+K SP EYR + Sbjct: 513 YKDPHYFSYIFKKVQGCSPKEYRAR 537 >UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35CCD Length = 287 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 15/246 (6%) Query: 43 LEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ 100 L +L+G + G L P + + A ++ WQ + + + V Sbjct: 38 LIYILKGTLNISQYGVQYRLEPNQFILLHAETEHYG-WQESSEYLHYYWVHFHVPEPPVY 96 Query: 101 WDGKQYQN-----------LAKQHVARRGPRIGSFLLQTLN-EMQMQPQEQQTARLIVAS 148 + +Y + + + G R+ Q L+ M+ P + + + Sbjct: 97 INQTEYPSEISQALPEKYIVPETGTLTHGKRVPLLFSQLLDISMRRYPASEYLLHYSLTA 156 Query: 149 LLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQK 208 LL S++ I+D+I + A+T +A+ F+ +P+YLS ++K Sbjct: 157 LLLELAGEFSSRLLAPKEDPLHIYRIQDWIRRNFQQAITVAQIAEIFHYNPDYLSSSYKK 216 Query: 209 TGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +Y+N R+E AK LL D +KE+A CGF D YF ++F++ + +PSE++ Sbjct: 217 LTGTTLTQYINSVRIESAKNLLTSTDFTLKEIAFYCGFFDEKYFFKVFKQYEDMTPSEFK 276 Query: 269 RQYHSQ 274 + + Sbjct: 277 GAFFKK 282 >UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD25_9FIRM Length = 519 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 10/134 (7%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 + R+ + L+ R YIDE A ++ S+A++ YI+P Sbjct: 395 EITRMFIEQLIE----------NDEEDVHYTISNARHYIDEHLAEDISVSSIAESLYITP 444 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 NY S LF++ G NEY+ R+E AK+LL+ +K ++A G+ D+NYF F+K+ Sbjct: 445 NYFSRLFKRITGEGCNEYIVRKRIEKAKSLLETTSIKTGKIAMMVGYRDTNYFSLAFKKH 504 Query: 260 TERSPSEYRRQYHS 273 T +SP++YR + + Sbjct: 505 TGKSPTKYREEMQN 518 >UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIR6_9CLOT Length = 370 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%) Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 +L S D + S +++ S+ YI Y L+ +SVA +S YLS LF Sbjct: 240 QTLTSIVLDAI-SLLESGDVSRVYVNKAIQYIQAHYNENLSLDSVANEIELSSPYLSSLF 298 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 + F Y+ R++ AK LL G +KV E+A+ G+ D YF ++FRK +PS+ Sbjct: 299 SRILGTTFVNYIQSVRIQKAKELLCGTTMKVYEIAYCIGYDDEKYFSQVFRKTEGITPSQ 358 Query: 267 YRRQYHS 273 +R Q S Sbjct: 359 FRAQSSS 365 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 98/241 (40%), Gaps = 17/241 (7%) Query: 51 FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLA 110 F G A + P D++ + + ++ + ++ + + Q+ +N Sbjct: 60 FEIAGYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFL 119 Query: 111 K-----------QHVARRGPRIGSFLLQTLNEMQMQPQEQQTA-RLIVASLLSHCRDLLG 158 + I L + L E + + L+V L L Sbjct: 120 DFVSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALK 179 Query: 159 SQIQTASRSQA-----LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIG 213 + + + ++++ L +A +YI+ Y ++ + +A+ ++S +Y + F++ I Sbjct: 180 MEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGIS 239 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 YL R+E AK LLK D ++ ++A + GF + F +F+K + +P +YR+ Sbjct: 240 PINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQV 299 Query: 274 Q 274 + Sbjct: 300 K 300 >UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A1_9CLOT Length = 536 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 3/169 (1%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 K+ L I + L +++ + A + ++ + + Sbjct: 371 KEVLTLFYFGTHNYNIEIPDQYPELLKHLEVLGTIHEAAGYLKRYMVHSLMHWIEEKKYV 430 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 SR R +I E Y LT E+V++ +P Y S +F+K F++YL R+ Sbjct: 431 ESRP---IRLARQFIGENYYLPLTLETVSREIGFNPTYFSGMFKKETGKNFSDYLKEIRI 487 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 E+AK +L + +V++++ A G+ D YF RLF+K T +P+E+RR Y+ Sbjct: 488 ENAKNMLLNTEQQVEDISFAVGYSDIKYFSRLFKKQTGVTPTEFRRLYN 536 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 12/231 (5%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDG--KQ 105 G G L G ++++ + L+ + F+ + K+ Sbjct: 63 SGTLEYNGQKYMLQAGGMVFIDCLKPYAHESSEDD-----LWTLRWCHFNGIGMTEVYKK 117 Query: 106 YQNLAKQHVAR--RGPRIGSFLLQT--LNEMQMQPQEQQTARLIVASLLSHCRDLLG-SQ 160 Y Q V R + +++ + E Q ++ + + L+ D + Sbjct: 118 YLERGGQPVFRSAKFDLYAKLMMELHRIAEGQDYVRDMKINAALSQLLILLMEDAWNPDK 177 Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 I S + + I+ Y+D+ Y +T + ++ F+I+ YL +F++T I YLN Sbjct: 178 IPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKIFRETYGITIVNYLNQ 237 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 R+ AK LL+ +L ++E+A G D+NYF R F K PSE+R+ + Sbjct: 238 KRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPSEFRKMW 288 >UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0J9_9BACE Length = 425 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 12/212 (5%) Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 ++ F +L F + + + F+ +LNE Sbjct: 226 ACLDDLFEELVLVEGGNFDSIKLHFFELYISLARMSTERGASLRNIFGLDFKFIN-SLNE 284 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + Q +R +VA D+ Q +S + YI+ Y LT + Sbjct: 285 LNTLDSLAQWSRELVA---HFVDDIFADLPQVSSAT----TRAVSYINAHYMDKLTLRDL 337 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A A +++ + LS LF++ F +YLN R+EH+ L++ D + E++ GF D +Y Sbjct: 338 ASALFLNESSLSKLFRQELGTSFTDYLNRIRIEHSTELMRNTDRSLLEISGLVGFDDQSY 397 Query: 252 FCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 F ++F+K T +P RQY SQL + T + Sbjct: 398 FTKIFKKVTGTTP----RQYKSQLNNEKHTSD 425 >UniRef50_A5N028 Transcriptional regulator n=12 Tax=Clostridiales RepID=A5N028_CLOK5 Length = 283 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 108/281 (38%), Gaps = 16/281 (5%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M ++ L+ ++ ++ +Y FP + G +F Sbjct: 1 MEIKLNELVEHFVHSCFRVQGVYHYKIEPGTARWQKSTPFPGFIFPMGGKAQFHFNDTPY 60 Query: 59 TLVPGDVLYVPAGG--WNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 G++++ A SVL+ Q + + ++ Q Sbjct: 61 LAGVGNIIHGGANMSLHKRVVGNGKWQYISVLYDIQD-----SKQEKICLRDAHFQINIG 115 Query: 117 RGPRIGSFLLQ---TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 + PR+ L + T NE P Q + L + S+ QT + +Q LF+ Sbjct: 116 QSPRLTELLWRLWKTFNEPGALPAFQ--TETLFRCTLEEV--FICSRNQTNNSAQTLFQQ 171 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 + YI + Y LT +A+ ++ N L ++F K +G +Y+ RL K LL Sbjct: 172 VSAYIHDHYMDILTVRGLAEQNGVNENRLFYVFSKYAGMGPGDYIMAYRLNRGKELLITS 231 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 V+EVA + G+ D+ YF R FRK SPS R ++ + Sbjct: 232 SAPVREVAKSVGYPDALYFSRSFRKRFGISPSGLREKFRNN 272 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 10/157 (6%) Query: 124 FLLQTLNEMQMQPQEQQ----------TARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 LL+ + E+ M P+EQ+ + + S++ + S + ++ L + Sbjct: 374 HLLREMRELHMLPREQEEGLWKRLREPMSLKELLSIIVSLIEHARSSLSAKKSTELLMMS 433 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 ++YI E +A IS +Y LF+ F EYL R+E AK LL+ Sbjct: 434 AQNYIQNHLGRDFGIEDIADYLGISSSYFCLLFKNHFGETFVEYLTKQRMEMAKCLLRTS 493 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + + ++ + G+ + YF ++F+K T +PS+YR++ Sbjct: 494 ERSIAQIGSSIGYQERRYFTKVFQKYTGMTPSDYRQK 530 >UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX83_9CLOT Length = 539 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 3/132 (2%) Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA-LTRESVAQAFYIS 198 + A + L+ + ++ + +L +++I + Y L+ VA +S Sbjct: 408 EKAAEYIEELIIQAIRMRNERL--GKKHSSLITEAKEFIVKNYQEETLSLSDVADQVGLS 465 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 ++ S F++ F E+L R++ AK +L D+K ++++ G+ D +YF LF+K Sbjct: 466 SSHFSTTFKQETGESFVEFLTSVRMDKAKEMLCFTDMKASQISYEVGYKDPHYFSYLFKK 525 Query: 259 NTERSPSEYRRQ 270 +PSEYR + Sbjct: 526 TQGCTPSEYRSR 537 >UniRef50_UPI0001C36A4D two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36A4D Length = 508 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + + E Q + ++ + +D + + ++ + + R+YI++ Y+ Sbjct: 362 FKDILEQARQSESYESLTDLFEGYFKEYKDRIKRAVVSSEKKDII--HAREYIEKHYSEN 419 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 LT E +A +++P Y S F+K F +YLN R++HA LL D K E+A G Sbjct: 420 LTLEVLAGEIHMNPYYFSSFFKKNSGENFKDYLNKVRMKHAIDLLVSTDKKTAEIAADVG 479 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYH 272 F DS F LF + +PS YR++ Sbjct: 480 FRDSRSFSELFSRIYGETPSNYRKRVK 506 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%) Query: 149 LLSHCRDLLGS-QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 LL + ++ A L E +YI Y S + + VA I+PNY S LF+ Sbjct: 390 LLQDIERAIHVFNLKAADNKDWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFK 449 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + FNEY+NH R+E AKTLL+ K+ E+A GF + YF +FRK + +P++Y Sbjct: 450 QKTGKSFNEYVNHMRVEEAKTLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQY 509 Query: 268 RR 269 R+ Sbjct: 510 RK 511 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 9/263 (3%) Query: 7 YLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGD 64 L + +++IY ++ + + + GE G L PG Sbjct: 44 QLADLFASHSFHIQEIYRLVIQPHSTLSEFKTESAGFLLSIRGEARLNINGKSYDLQPGS 103 Query: 65 VLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF 124 V++V G Q S + F + D + + A + PRI Sbjct: 104 VMHVTPGC------QLALQVISQSEYEYHSLFYHLNCDKESDCDTAFKLETGANPRIIE- 156 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 LL L++ P R+ L + L+G + + +S ++ + E YI +Y + Sbjct: 157 LLTMLHQNVHAPGGMGKLRVKELFLRILYQMLMGCKQKESSPNERIIEEAVAYIRGQYMN 216 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 LT + +A+ ++P S+ F K + +Y+ R+E A+ +LK ++ +++V+ Sbjct: 217 PLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMERAREILKAGNIPIRDVSMTV 276 Query: 245 GFVDSNYFCRLFRKNTERSPSEY 267 G+ + YF RLF+K PS Y Sbjct: 277 GYPNPLYFSRLFKKKFGVPPSAY 299 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 326 7e-88 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 322 7e-87 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 277 4e-73 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 237 2e-61 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 235 2e-60 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 227 3e-58 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 223 4e-57 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 223 6e-57 UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 216 6e-55 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 215 1e-54 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 214 3e-54 UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=P... 212 1e-53 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 210 5e-53 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 208 2e-52 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 207 3e-52 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 207 4e-52 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 206 6e-52 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 205 1e-51 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 205 1e-51 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 205 2e-51 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 202 1e-50 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 202 2e-50 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 200 4e-50 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 9e-50 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 197 3e-49 UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=T... 196 5e-49 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 196 8e-49 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 194 3e-48 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 193 4e-48 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 193 5e-48 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 193 6e-48 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 193 7e-48 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 1e-47 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 192 1e-47 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 191 2e-47 UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family ... 191 3e-47 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 190 3e-47 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 189 8e-47 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 189 1e-46 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 189 1e-46 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 188 1e-46 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 188 2e-46 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 188 2e-46 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 188 2e-46 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 188 3e-46 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 187 3e-46 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 187 3e-46 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 187 4e-46 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 187 4e-46 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 187 4e-46 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 186 5e-46 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 186 5e-46 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 186 6e-46 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 186 7e-46 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 186 7e-46 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 186 9e-46 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 185 2e-45 UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=... 185 2e-45 UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=... 184 3e-45 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 184 3e-45 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 184 3e-45 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 184 3e-45 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 183 4e-45 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 183 5e-45 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 183 7e-45 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 183 8e-45 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 183 8e-45 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 182 9e-45 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 182 1e-44 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 182 1e-44 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 182 1e-44 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 182 1e-44 UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=V... 181 2e-44 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 181 2e-44 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 181 2e-44 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 181 2e-44 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 181 2e-44 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 181 3e-44 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 181 3e-44 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 180 4e-44 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 180 4e-44 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 180 4e-44 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 180 5e-44 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 180 5e-44 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 180 6e-44 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 180 6e-44 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 179 9e-44 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 178 1e-43 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 178 1e-43 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 178 2e-43 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 178 2e-43 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 177 3e-43 UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bactero... 177 4e-43 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 177 5e-43 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 176 5e-43 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 176 7e-43 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 176 7e-43 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 176 7e-43 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 176 9e-43 UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1... 176 9e-43 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 176 9e-43 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 176 1e-42 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 175 1e-42 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 175 1e-42 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 175 1e-42 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 175 2e-42 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 175 2e-42 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 175 2e-42 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 175 2e-42 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 175 2e-42 UniRef50_A5N028 Transcriptional regulator n=12 Tax=Clostridiales... 174 4e-42 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 173 4e-42 UniRef50_C6D132 Transcriptional regulator, AraC family n=1 Tax=P... 173 5e-42 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 173 5e-42 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 173 5e-42 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 173 6e-42 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 173 6e-42 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 173 8e-42 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 173 8e-42 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 172 9e-42 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 172 1e-41 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 172 1e-41 UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostri... 172 1e-41 UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens ... 171 2e-41 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 171 2e-41 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 171 2e-41 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 171 2e-41 UniRef50_UPI0001C35596 transcriptional regulator, AraC family pr... 171 2e-41 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 171 2e-41 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 171 2e-41 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 171 2e-41 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 171 3e-41 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 171 3e-41 UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus pl... 171 3e-41 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 170 4e-41 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 170 4e-41 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 170 4e-41 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 170 4e-41 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 170 5e-41 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 170 6e-41 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 170 6e-41 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 170 7e-41 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 170 7e-41 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 170 7e-41 UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=G... 170 7e-41 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 169 9e-41 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 169 9e-41 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 169 9e-41 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 169 1e-40 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 169 1e-40 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 169 1e-40 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 169 1e-40 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 168 1e-40 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 168 1e-40 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 168 1e-40 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 168 2e-40 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 168 2e-40 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 168 2e-40 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 168 2e-40 UniRef50_UPI0001C36187 helix-turn-helix domain-containing protei... 168 2e-40 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 168 2e-40 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 168 2e-40 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 168 2e-40 UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P... 168 2e-40 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 168 3e-40 UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=An... 168 3e-40 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 167 3e-40 UniRef50_C6D7A2 Transcriptional regulator, AraC family n=1 Tax=P... 167 5e-40 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 166 5e-40 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 166 7e-40 UniRef50_UPI000178A031 transcriptional regulator, AraC family n=... 166 7e-40 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 166 7e-40 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 166 7e-40 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 166 8e-40 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 166 8e-40 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 166 8e-40 UniRef50_A8MKK7 Transcriptional regulator, AraC family n=1 Tax=A... 166 9e-40 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 166 9e-40 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 166 1e-39 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 166 1e-39 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 165 1e-39 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 165 1e-39 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 165 1e-39 UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 165 2e-39 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 165 2e-39 UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lac... 165 2e-39 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 165 2e-39 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 164 2e-39 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 164 3e-39 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 164 3e-39 UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 T... 164 3e-39 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 164 3e-39 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 164 3e-39 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 164 4e-39 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 163 5e-39 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 163 5e-39 UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=C... 163 5e-39 UniRef50_UPI000178819A transcriptional regulator, AraC family n=... 163 6e-39 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 163 6e-39 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 163 6e-39 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 163 6e-39 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 163 7e-39 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 163 7e-39 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 163 7e-39 UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P... 163 7e-39 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 163 8e-39 UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=... 163 8e-39 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 163 9e-39 Sequences not found previously or not previously below threshold: UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 178 2e-43 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 177 4e-43 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 177 5e-43 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 176 5e-43 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 176 6e-43 UniRef50_P77402 Uncharacterized HTH-type transcriptional regulat... 175 1e-42 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 175 2e-42 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 174 3e-42 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 173 7e-42 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 172 2e-41 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 171 2e-41 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 170 4e-41 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 170 4e-41 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 170 5e-41 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 169 1e-40 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 168 1e-40 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 168 2e-40 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 168 2e-40 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 168 2e-40 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 168 3e-40 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 167 3e-40 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 166 7e-40 UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=P... 166 9e-40 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 166 1e-39 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 165 2e-39 UniRef50_Q9RC93 Orf1 protein n=1 Tax=Bacillus sp. GL1 RepID=Q9RC... 165 2e-39 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 164 3e-39 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 164 3e-39 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 163 5e-39 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 163 7e-39 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 163 7e-39 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 163 8e-39 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 326 bits (835), Expect = 7e-88, Method: Composition-based stats. Identities = 283/283 (100%), Positives = 283/283 (100%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 322 bits (827), Expect = 7e-87, Method: Composition-based stats. Identities = 282/283 (99%), Positives = 282/283 (99%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL Sbjct: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL 60 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 VPGDVLYV AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR Sbjct: 61 VPGDVLYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE Sbjct: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV Sbjct: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE Sbjct: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 277 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 172/280 (61%), Positives = 205/280 (73%), Gaps = 3/280 (1%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF---VDTGAG 57 M +D++ L+ + + ++YFA + QVDFPRL I+L G+ Sbjct: 1 MDNDINQLIDSFLKKQNGIGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENA 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 + L DVLY+P WN PQWQAP S+LF KQ+L S+ W+GK + K+ RR Sbjct: 61 SPLEANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVEKRQALRR 120 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GSFLLQ LNE++MQPQEQ+TAR IV SLLSHC DLLGSQ QT+SRSQALFEAIR Y Sbjct: 121 GPRVGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTSSRSQALFEAIRQY 180 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 +D YA L+RESVAQAFY+SPNYLSHLFQK G +GFNEYLNH RLE A+ LLKG+D+KV Sbjct: 181 MDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKV 240 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 K++AHACGF DSNYFCRLFRK TERSPSEYRRQYHSQLTE Sbjct: 241 KDIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHSQLTE 280 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 158/276 (57%), Positives = 200/276 (72%), Gaps = 6/276 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTG---AG 57 M D+ +L RLI L Q+ F + VP LA+ V FPRLEIVLEG+ + G A Sbjct: 1 MIEDLPDILHRLIGQKDHL-QVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAA 59 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 +TL VLYV AG W PQW PATT S+LFG+Q+LGFS+ +WDGK + KQ V+R Sbjct: 60 STLTTLQVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWDGKCL-HTEKQSVSRL 118 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR+GS+LL +LNE+ +QP + TARL+VA+LLSHCR+ L SRS+ LF A++DY Sbjct: 119 GPRVGSYLLLSLNEVSLQP-DPLTARLVVAALLSHCREQLVGLEMRVSRSRDLFLAVQDY 177 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ++E + LTRESVA+ F+I+PNYLSH+FQK+G++GFNEYL RLE AK LL+GYDLKV Sbjct: 178 LEENLSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKV 237 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 KE+AH CGFVDSNYFCR+F++ TERSPSEYRR S Sbjct: 238 KEIAHNCGFVDSNYFCRVFKRYTERSPSEYRRHCRS 273 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 143/279 (51%), Positives = 183/279 (65%), Gaps = 9/279 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV---DTGAG 57 M +++ L+RL L+L ++ FAS+ PRLEIV+ G + + G Sbjct: 1 MSLEIAPTLARLREASLALGEVLFASALAAPAQA------PRLEIVIAGSLLRRDEHGRA 54 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 GDVLY+P+G AT S+LF KQ++ ++ QWDG Q Q + +ARR Sbjct: 55 YRQRCGDVLYLPSGEQRQITGDEEATLLSLLFAKQRIVLTLWQWDGAQLQRRQQTQIARR 114 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 GPR G+FLLQ LNE MQP Q TARL V++LLSHC DLL ++TA QAL AIRDY Sbjct: 115 GPRTGTFLLQALNEQAMQPAAQATARLTVSALLSHCSDLLAGHLRTAPHRQALLNAIRDY 174 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 ID+ Y AL+R++VA+ F+I+PNYLS LFQ+ GFN YLNH RLE AKTLLK Y++ + Sbjct: 175 IDDHYMDALSRDAVARRFHITPNYLSQLFQRADGGGFNHYLNHVRLEQAKTLLKEYEMTI 234 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 K +AHACG+ DSNYFCRLFR+ TER+PSEYRRQYHSQ Sbjct: 235 KAIAHACGYDDSNYFCRLFRQRTERTPSEYRRQYHSQSP 273 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 98/269 (36%), Gaps = 2/269 (0%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 L I + G + L L GE F G + P D++ V Sbjct: 15 RESFRLLYISKSRFGGDWNSTTHTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQ 74 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + + ++ G + F + D +++ R + L + Sbjct: 75 VEHTELSLNASPLEYIVLGVASMEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRS 134 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + Q ++ L C + + A I+ Y+D Y ++ + + Sbjct: 135 LDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLL 194 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +++ YL+H FQ+ I YLN R+E +K +L + +++ GF +Y Sbjct: 195 AELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSY 254 Query: 252 FCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 F + FRK +P+EYRRQ PT Sbjct: 255 FSQCFRKAEGMTPNEYRRQTRQGKRPAPT 283 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 5/273 (1%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFA--SSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGA 56 M H+ Y+ + IY ++ + DF + V G E + G Sbjct: 1 MAHEHFYVKRSERESLVQPELIYTGLLEDAPNWFNIQHSHDFCEILYVAGGAGEAILEGK 60 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 L PGD++ V G + + A A + + + + Sbjct: 61 KFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRDFAVPGLPAGCLSQEKYRVLSCGE 120 Query: 117 RGPRIGSFLLQTLNEMQMQPQ-EQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 ++ +L + L E Q + Q+ ++ +V++LL L+ + + + I+ Sbjct: 121 YRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQECQKIK 180 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +Y+D+ + S +T +S+++ YIS +YLSHLF++ + +YL R+E A LL +L Sbjct: 181 EYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETEL 240 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 V EV+ A G+ + YF ++F++ SP +YR Sbjct: 241 PVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 2/268 (0%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 L I + G + L L GE F+ +G + P D++ V Sbjct: 46 RESFRLLYISKSRFGGDWNSTVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQ 105 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNE 131 + + ++ G + + D +++ R + L + Sbjct: 106 VEHTELSLNASPLEYIVLGVSGIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRS 165 Query: 132 MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 + Q ++ L C L ++ I+ Y+D Y ++ +++ Sbjct: 166 LDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTL 225 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +I+ YL+H FQK I YLN R+E +K +L + +++ GF +Y Sbjct: 226 AEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSY 285 Query: 252 FCRLFRKNTERSPSEYRRQYHSQLTEKP 279 F + FRK +P+EYRRQ P Sbjct: 286 FSQCFRKAEGLTPNEYRRQVRQGQRPAP 313 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVP 62 + L S L+ P L +++FA+ +P + +D PRL+IVL GE+ + LV Sbjct: 13 FADLFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYGNQLEKSQHRLVE 72 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR-I 121 G++L++PA N P + P S++F G S ++ R Sbjct: 73 GEMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPLRRIELPHPQRGE 132 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ-TASRSQALFEAIRDYIDE 180 G +L L + PQEQ + +V SLL CR ++ + R++ L+ +I +++ + Sbjct: 133 GEAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAEFLYHSICNWVQD 192 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 YA L+RESVA F I+PN+LS LF + G + F +Y+ R+ A+ +L+ Y L V EV Sbjct: 193 NYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARMILQKYHLSVNEV 252 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 A CG+ DS+YFCRLFR+ +P EYR ++ Sbjct: 253 AQRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 95/272 (34%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVP 62 + L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV Sbjct: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR-I 121 G++L++PA N P P S++F LG S + A+Q R Sbjct: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE 132 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDE 180 G +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + Sbjct: 133 GEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQD 192 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 YA LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EV Sbjct: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 A CGF DS+YFCR+FR+ +P EY ++ Sbjct: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 5/270 (1%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVL--EGEFVDTGAGATLVPGDVLY 67 S + N L I + + + F L V+ +GEF+ + D + Sbjct: 11 SDIKNLSFRLESITKSKYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVI 70 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + + ++ G Q L FS + + + ++ I +L Sbjct: 71 INPQVEHTEVSSPDSPLEYIVVGIQGLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNA 130 Query: 128 TLNEMQMQPQEQQT---ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 + E Q L + + ++ + S++ I+ Y+ Y Sbjct: 131 MVQEATNQALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRE 190 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ E++A ++S Y+SH F+K + EYL R++ +K LL+ + + +VA Sbjct: 191 SIQLEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIV 250 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 GF YF + FRK T SP++YR +Y + Sbjct: 251 GFTTPTYFSKQFRKITGISPTDYREKYQKE 280 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 156/274 (56%), Gaps = 10/274 (3%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGA------ 58 L+S ++N S I+FA P+ +YQV+FPRLE+VL+GE+++ Sbjct: 25 FDDLISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDRKVSK 84 Query: 59 -TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQ--YQNLAKQHVA 115 GD +++P+ WN P W + S+LFG++QLG S+V + + ++ K + Sbjct: 85 IVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEVNFYDIQKHSIQ 144 Query: 116 RRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAI 174 R +L+ L+ + + ++ L++ +LL + + +L + ++ + +R Q L++ I Sbjct: 145 TRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQDLYQGI 204 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YI E + +TRES+A F IS N+LS LF++ G + +Y+ R++ AK +LK Y+ Sbjct: 205 CIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLKKYN 264 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 K+ EVA CGF D NYFCR+F+ T R+P++YR Sbjct: 265 FKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QGZ7_9ENTR Length = 285 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 92/280 (32%), Positives = 143/280 (51%), Gaps = 8/280 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD------T 54 M + +LS + + A+ N P +AY + PR+E++++G Sbjct: 1 MSAFIQSILSEFSLQCATTESVLVANGNAQPPAMAYHLHVPRIELIVKGTLSMLLPKGED 60 Query: 55 GAGATLVP-GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH 113 L P G V Y+PA WN P W +P S++F KQ +GFS+ WDG Q++ + K + Sbjct: 61 KIVKYLRPVGTVTYIPANSWNSPLWGSPVICMSIVFWKQDVGFSISNWDGTQFKEVEKFN 120 Query: 114 VARRGPRIGSFLLQTLNEM-QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 + + LL+ + +T IV +LL+ + + A +L + Sbjct: 121 LENSSSSVRDRLLELAESLAWTHNNSGETFAHIVYALLNDLLYQITDGMSNAKGPLSLLD 180 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 I+ +ID Y + + RESVA+ F ISP YLS LF + + FNEYL R+ +KTLL Sbjct: 181 EIKSHIDSHYQADINRESVAETFNISPGYLSRLFSRESDVKFNEYLKLARISRSKTLLTS 240 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +LK+ EV+ CGF D+NYFC++FR + +P EYRR+ Sbjct: 241 TNLKINEVSEKCGFTDTNYFCKVFRDINDCTPLEYRRKNK 280 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 7/268 (2%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLY 67 S L + A+S+ + + F L V +G F G + D++ Sbjct: 11 SDSDFLKAQLLYVTCATSDKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLIL 70 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + + G + + F + + + + ++R I +L Sbjct: 71 INPNIPHTEFGNKEQPWEYIALGIEGVQFQY--SEKEAPYSYSVFSLSREHREIPWYLST 128 Query: 128 TLNEMQMQPQEQQT-ARLIVASLLSHCRDLLGSQ--IQTASRSQALFEAIRDYIDERYAS 184 + E+Q Q + QT + ++ +L + ++ + YI+E Y Sbjct: 129 LVKEIQTQQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHE 188 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 +T ++++ +I+ YL H F+ + YL R+E A+ LL+ + V ++ Sbjct: 189 DITLDTLSALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEIS 248 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYH 272 GF +YF + FR+ T +P+ YR++ Sbjct: 249 GFSSQSYFSQTFRRLTGTTPNAYRKKKK 276 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 158/281 (56%), Gaps = 13/281 (4%) Query: 1 MYHDVSYLLSRLING--PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD----- 53 M + S + Q+ +A P P A+QV FPRLE VL G + + Sbjct: 1 MQQVFQDIFSVITEEELSEHTHQLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDS 60 Query: 54 --TGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQ--YQNL 109 L G L+VPA WN P WQ S+LFG++QLG S+V W +Q + ++ Sbjct: 61 QGDKIEQRLTTGQFLFVPANCWNKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDV 120 Query: 110 AKQHVARRGPRIGSFLLQTLNEMQ-MQPQEQQTARLIVASLLSHCRDLLGS-QIQTASRS 167 K +LQ L ++Q + Q ++ +L + ++L+ ++LL Q + R+ Sbjct: 121 QKHSYPLSAKSPVHSMLQALIDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRA 180 Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 Q++F+ I Y+ E + A++RE+VA+ F ISPN+LS LF++ G + F +Y+ + R++ AK Sbjct: 181 QSVFQRICIYVQENFHKAISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAK 240 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +L+ Y + ++E+AH CGF D+NYFCR+F+K T R+P+EYR Sbjct: 241 FMLRRYPMHLEEIAHRCGFRDTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 17/257 (6%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQA----PATTFS 86 D + D + ++ GE + + GD++ +P + P Sbjct: 28 DGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERIL 87 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ-----EQQT 141 V F + + + + + Q AK V R + Q L M + + ++ Sbjct: 88 VNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEY 147 Query: 142 ARLIVASLLSHCRDLLGSQIQTA------SRSQALFEAIRDYIDERYASALTRESVAQAF 195 +L++A LL + + ++ R + YI+ Y L+ +A F Sbjct: 148 CQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRF 207 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 ++SP YLSHLF + + Y+N R+E A LL+ +L V E+A+ G+ +F R+ Sbjct: 208 HLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRV 267 Query: 256 FRKNTERSPSEYRRQYH 272 F+K SP YRR+ Sbjct: 268 FKKAKAVSPQSYRREQR 284 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 12/270 (4%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPA 70 ++ +++I ++++ A+ F + + GE GD++ VP+ Sbjct: 5 MSKDFDIKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPS 64 Query: 71 GGWNFPQWQAPATTFSVLFGKQQLGFSVVQ--WDGKQYQNLAKQHVARRGPRIGSFLLQT 128 G + + ++ + +Q + +N K V + +++ Sbjct: 65 GCLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVAL 124 Query: 129 LNEMQMQPQEQQTAR--------LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 L+++ + + + + C++ + I+ + + + YI E Sbjct: 125 LDKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYE 184 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 YA L+ E VA F +S +YLS F+ GF EY+ + R+++A LL + + ++ Sbjct: 185 HYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDI 244 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A CGF DSNYF FRK SP +YR+ Sbjct: 245 AFECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 156/276 (56%), Gaps = 13/276 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD------T 54 M+H+++ LIN L ++ + + P AYQV+F RLE++L+GE+ Sbjct: 1 MHHNIAE---YLINFNGKLSKVCLSKNTP--PQGAYQVNFNRLELILDGEYDLIVDARTG 55 Query: 55 GAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD-GKQYQNLAKQH 113 L G+++Y+P+ W+ P W++ S+LF K Q+GFS V + G + ++ K Sbjct: 56 EKKLLLQQGEMVYIPSNAWSKPTWESTCKILSILFSKHQIGFSFVHHEVGNGFVDVQKYA 115 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG-SQIQTASRSQALFE 172 + +L LN M + + A + +L+++C +LL Q + SR + L+ Sbjct: 116 MPLPTSMAVEHVLDALNSMSDESRSMVMAGHLANALVTYCNELLQGPQQEKVSRREKLYR 175 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 ++ Y+ E + +TR SVA F +S ++S LF + G++ + +Y+ + RL+ AK +LK Sbjct: 176 SMCIYVQENFHKNITRTSVASRFGVSSAHVSRLFNQEGSVRYADYVTYVRLDRAKFMLKK 235 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 Y+ KV E+AH CGF D+NYFCR+F++ T ++PSEYR Sbjct: 236 YNFKVDEIAHRCGFKDTNYFCRVFKQKTGKTPSEYR 271 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 9/270 (3%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLY 67 L N L I F+ G + + F L V+ GE F + L GD++ Sbjct: 11 EDLQNLNAKLLSIAFSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVI 70 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 +P + + + G + F + +H P I Q Sbjct: 71 IPPYTEHTERSSQNHPLEYYVLGIDGISFLSQKDRECAQVFCNFEH----DPSIHELFRQ 126 Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQ---TASRSQALFEAIRDYIDERYAS 184 L E++ QT + +L I + R I++Y+D YA Sbjct: 127 MLYEIRTAQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAE 186 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 +T +++ +++ Y+ H F K + +YLN TRL+ A+ LLK + + ++A + Sbjct: 187 HITLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASST 246 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 GF +YF ++FRKN +P +YR+++ Sbjct: 247 GFSSQSYFTQIFRKNFNMTPVKYRQEHAKN 276 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 11/263 (4%) Query: 18 SLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNF 75 L ++ + F L VL G F+ + D++ + + Sbjct: 19 HLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHT 78 Query: 76 PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM- 134 + ++ G L F + + H R+ + L E + Sbjct: 79 EKSSLEDPLEYIVLGVDGLNFVIDDANEYLL-----FHSDEMKDRLDFYFRTILEETENS 133 Query: 135 QPQEQQTARLIVASLLSHCRDLLGSQIQ---TASRSQALFEAIRDYIDERYASALTRESV 191 Q ++ + ++ L+ H S ++ + YID + +T + + Sbjct: 134 QKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKL 193 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ I+ Y SH F +T I YL R+ ++ LL D+ + ++A CGF S+Y Sbjct: 194 AEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSY 253 Query: 252 FCRLFRKNTERSPSEYRRQYHSQ 274 F + FRK+ +P+ YR+Q+ Sbjct: 254 FTQCFRKSCGMTPTAYRKQFLRN 276 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 8/267 (2%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVP 69 LIN L + + G + F L V +G F + D + + Sbjct: 14 LINNQARLLYVSSSKYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIIN 73 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + ++ + F + + K Y + + A I +L + Sbjct: 74 PNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSLKDYISC---NYANYKNEILFYLNLMV 130 Query: 130 NEMQMQPQ-EQQTARLIVASLLSHCRDL--LGSQIQTASRSQALFEAIRDYIDERYASAL 186 E Q + + + ++ LL + L + + + I++YID Y + Sbjct: 131 KESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEI 190 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T +++A+ +++ YL+H F+ + YL R+ +K LL+ DL + +++ GF Sbjct: 191 TLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGF 250 Query: 247 VDSNYFCRLFRKNTERSPSEYRRQYHS 273 +YF + F+K+T SP +YR+ + Sbjct: 251 SSLSYFAQAFKKSTNFSPLQYRKNHQK 277 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 104/245 (42%), Gaps = 8/245 (3%) Query: 35 AYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWN--FPQWQAPATTFSVLFG 90 ++ +F + + +G + + + L P + + P + F + P + F Sbjct: 30 SHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRRLLLYFN 89 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ-QTARLIVASL 149 + + + + + K A+ P I + + L E + + L+V +L Sbjct: 90 PEVIRSPQILRTLSERARVYKLPRAQSAP-IYNLMKDILQEQERDDLYSRELITLMVNAL 148 Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 + R++ I +Y+ E + +T E +A FY+S +L F++ Sbjct: 149 ALQLVRNSDEAARPEQRNR--VTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRY 206 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + +Y+++ R+ HA+ LL+ D + E++ GF + +F R+++ T SPS+ ++ Sbjct: 207 TSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQ 266 Query: 270 QYHSQ 274 Y + Sbjct: 267 AYLKR 271 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 11/263 (4%) Query: 15 GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGG 72 P L ++ + F L VL G F+ + +++ + Sbjct: 1 MPYRLLYSSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSI 60 Query: 73 WNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEM 132 + + ++ G + L F + K+Y N+ + + L EM Sbjct: 61 RHTEVSDKNSPLEYIVLGVEGLNFLIYN--DKEYLNIQ---CEDFSENLDFYFHTILREM 115 Query: 133 QMQPQEQQT-ARLIVASLLSHCRDLLGSQIQTASRSQALFEA---IRDYIDERYASALTR 188 Q + +T + ++ +L+ GS ++ S+ + + +ID + +T Sbjct: 116 DEQKESYETICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITL 175 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +++A+ +++ Y +H F + I YL R+ ++ LL DL +A CGF Sbjct: 176 DTLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSS 235 Query: 249 SNYFCRLFRKNTERSPSEYRRQY 271 S+YF + FRK +P+ YR+Q+ Sbjct: 236 SSYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 10/277 (3%) Query: 1 MYHDVSYLLS-RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAG 57 M + + + L I + + + F L V+ GE F+ Sbjct: 1 MSYRHYSIKDTDIPKLNTRLLSISLVKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNET 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 + GD++ +P + Q + + G ++ F R Sbjct: 61 HHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGIDKISFLAENGQTGIQAFCN----FRD 116 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTA---RLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 + Q L EM+ + L + L L + R I Sbjct: 117 QSSVSDIFAQMLYEMRNDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQI 176 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 ++Y+D Y +T +++ +++ Y++H F K + +YLN RL+ A TLL+ D Sbjct: 177 KEYLDTNYTERITLDTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTD 236 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 V ++A + GF +YF + FRK +P +YR+Q Sbjct: 237 HSVSDIASSTGFSSQSYFTQSFRKYYGMTPLQYRQQN 273 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 10/267 (3%) Query: 15 GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGG 72 ++L + G P + + F L V +G+ F+ + D++ + Sbjct: 16 QNITLLNTSSSRYEGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHI 75 Query: 73 WNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEM 132 + + G L FS + N + + + E+ Sbjct: 76 NHTEISKGSPPLSYFTVGVDGLCFSFNGHKEYRIFNCR-----EKKTDLLFYFNSLFQEL 130 Query: 133 QMQPQEQQT-ARLIVASLLSHCRDLLGSQIQ--TASRSQALFEAIRDYIDERYASALTRE 189 Q + +T ++ L+ R + S + TA I+ Y+D Y +T + Sbjct: 131 DRQSEGYETICSHMLDILILQLRRITDSPFELITAQHPSKECAHIKRYLDSNYGENITLD 190 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 +++ +++ YLSH F K I YLN R+E K LL+ D + ++AH GF Sbjct: 191 HLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQ 250 Query: 250 NYFCRLFRKNTERSPSEYRRQYHSQLT 276 +Y + FRK+ + YR+ + Sbjct: 251 SYLSQSFRKSCGMTAGTYRKLKKKRKD 277 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 11/246 (4%) Query: 35 AYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFS--VLFG 90 + + + +L G+ L PGD+ +P + ++ + F Sbjct: 35 PHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFS 94 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ-MQPQEQQTARLIVASL 149 + + + + + ++ Q + + L +MQ + Q ++ + SL Sbjct: 95 RDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSL 154 Query: 150 LSHCRDLLGSQIQTASRSQAL------FEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 L +LG + AL Y+++ Y +T VA +SP Y S Sbjct: 155 LHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFS 214 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 F+ + + F EYLN+ R++ A +L+ DL V VA ACGF D NYF +FR+ T S Sbjct: 215 KKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVS 274 Query: 264 PSEYRR 269 P EYR+ Sbjct: 275 PREYRK 280 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 5/261 (1%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN 74 LR I + G + F L V+ G+ F ++ D++ + + Sbjct: 18 FKLRYISISKYEGDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEH 77 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ- 133 + + ++FG + L F + + + + +F + E Sbjct: 78 TEKTMSNDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEFNA 137 Query: 134 MQPQEQQTARLIVASLLSHCRD--LLGSQIQTASRSQALFEAIRDYIDERYASALTRESV 191 +P + ++ LL + L T + + YID YA +T + + Sbjct: 138 RKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLDLL 197 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A+ +I+ YLSH F + YL TRL +K LL + EVA + GF +Y Sbjct: 198 AEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSY 257 Query: 252 FCRLFRKNTERSPSEYRRQYH 272 F ++FRKNT SP +YR+ Sbjct: 258 FSQIFRKNTGMSPLQYRKLKQ 278 >UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFY1_TOLAT Length = 285 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 116/286 (40%), Positives = 163/286 (56%), Gaps = 11/286 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDF---PRLEIVLEGEFVD---- 53 M H + +L L ++ + ++ DF PRLE ++EG Sbjct: 1 MSHTIEDILVESTGELYKLDAVFCSQEVSS--SSHHETDFEACPRLEFMVEGSANIKSTR 58 Query: 54 --TGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAK 111 L G VLY P + + S+ F KQQ+ ++ WDG+ L K Sbjct: 59 ESEKVITQLNSGSVLYTPVDIQFDFLFNEKSLLLSMGFYKQQIILKLIAWDGEHLNVLEK 118 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF 171 V RRGPR+G+F+LQ+L E Q +++QTA ++ SLL LL + + T R ++LF Sbjct: 119 TSVLRRGPRVGAFILQSLQEAMWQKEDKQTATYLIKSLLCSSLYLLQNPLTTQPRRKSLF 178 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 E IR+Y+D+ + LTR+SVA+ F IS YLS LFQK + FNEYLN+ RLE AK++LK Sbjct: 179 EEIRNYVDDNFYKDLTRDSVAKEFLISSTYLSRLFQKEADLRFNEYLNYIRLEKAKSMLK 238 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 +D+KVK+VA CGF DSNYFCRLF++ T+RSPSEYR QY S+ + Sbjct: 239 RHDVKVKDVARKCGFNDSNYFCRLFKEKTDRSPSEYRAQYCSKHGD 284 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 11/257 (4%) Query: 19 LRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFP 76 L I + P + F L +V G EF L GD + V + Sbjct: 20 LIYITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTE 79 Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 + + ++ + + + + P I ++ L E + Sbjct: 80 KSDEKNPLEYIAVAVDNFSLNLTDTNHLMF------NCISKNPNIIKYMDSMLAEQEGNK 133 Query: 137 QEQQTA---RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 L + + + + ++ Y+D YAS +T + +A+ Sbjct: 134 AYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAK 193 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 ++ YL H F K YL R+ AK LL+ D + +++ + GF +YF Sbjct: 194 LSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFT 253 Query: 254 RLFRKNTERSPSEYRRQ 270 + F K+ SP YR + Sbjct: 254 QCFIKSCGLSPKAYRNR 270 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 94/241 (39%), Gaps = 5/241 (2%) Query: 35 AYQV-DFPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 +Q D + +V G F PGDVL+ +G + + G Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETT-IDGDLATSCLGV 59 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLS 151 + + + A Q L T ++ + + ++L Sbjct: 60 SDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILC 119 Query: 152 HCRDLLGSQIQTASRSQALF-EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 + L Q Q ++ YID Y ++T +S+A +P YL+H F++ Sbjct: 120 KLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHI 179 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +Y+ R+ A+ LL G D + E+A +CG+ +SNYF +F++ +P +YRR Sbjct: 180 GYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRRD 239 Query: 271 Y 271 + Sbjct: 240 W 240 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVD-FPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGG 72 L S +++ D + +V G+ F G + GD+L G Sbjct: 11 QSHLLYAGKVSDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGV 70 Query: 73 WNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA-----RRGPRIGSFLLQ 127 + Q + GFS+ + + + R P I + + Sbjct: 71 LHEEQSSIDNPLIT-----YYCGFSLPKASPSEDWVIPPDVEPVIRSSRVFPEIEALMKM 125 Query: 128 TLNEMQMQPQEQQ-TARLIVASLLSHCRDLLGSQIQTASRSQA-LFEAIRDYIDERYASA 185 ++E ++ + +R ++ S++ R + +Q S L E I+DYID + Sbjct: 126 IVDESSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQN 185 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ + + + F+++P Y+SH+F+ I Y H R+ A LL ++KV EVA G Sbjct: 186 ISLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLG 245 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 + + NYF +FR+ T SP+ +R L Sbjct: 246 YDNPNYFSIIFRRVTGLSPNRFRESNQQNL 275 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 107/279 (38%), Gaps = 17/279 (6%) Query: 2 YHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD---TGAGA 58 HD++ L+RL L I + + + F L V+ G Sbjct: 4 KHDLTKRLNRL-----KLLYIDSSRFDSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKL 58 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 + D++ + + A ++ G + F + + ++ + Sbjct: 59 PIQADDLIIINPNVLHTECSDAEGGLEYIVLGIDGVEF---YTEQNAHPGVSIHNYEDYK 115 Query: 119 PRIGSFLLQTL-----NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 I ++ L ++ + + R++V + + LL + T ++ Sbjct: 116 HEILFYIKAILEAGKTHDEMSELIVENLLRVLVLNTMRRTTSLLDVETSTGGDNKDCI-F 174 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 + Y++ Y +T + +A +++ YLSH+F++ + +YL R+ AK LL Sbjct: 175 LEHYLNLHYRENITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINT 234 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 DL + +++ GF +YF + F+ SPS +R ++ Sbjct: 235 DLSITQISDIVGFRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 96/285 (33%), Gaps = 19/285 (6%) Query: 1 MYHDVSYLLSRLIN--------GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVL--EGE 50 M H LS N ++L + + L + +F + G+ Sbjct: 18 MIHKEDSTLSYTFNPDGKQGNQVHVTLLYVAISKYGTDWKSLPHSHNFAEFFYITNGSGQ 77 Query: 51 FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLA 110 F + D++ + + ++ G + + F + Sbjct: 78 FSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEYIVLGIEGIKFQAEDQGYILLNS-- 135 Query: 111 KQHVARRGPRIGSFLLQTLNEM-QMQPQEQQTARLIVASLLSHCRD--LLGSQIQTASRS 167 + + + +EM QP + ++ + + I + + Sbjct: 136 ----SAHKSDLHLYFNSLAHEMKSEQPYRNFVCQNLLNIIFTMILRNDAFKISIVSGPKL 191 Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 + YI+E Y +T E+++ +++ Y H F+K YL R+E + Sbjct: 192 TRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVHNFKKQFGTSPINYLIKRRIEESM 251 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 LL + + ++ GF +YF + F++ T +P EY++ Y Sbjct: 252 HLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITPQEYKKMYK 296 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 114/283 (40%), Gaps = 10/283 (3%) Query: 1 MYHDVSYLLSRLING-PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAG 57 M ++V + N P+ L I + + + F L + +G F+ Sbjct: 1 MSNEVYEIPQFQRNHLPVKLLYITKSKYDKDWHSTIHAHHFTELLYITKGKGTFIFYKEE 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 + +++ V + + + G Q L FS + + + + + Sbjct: 61 IPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQGLSFSSI----ENPSPVTIHNYKQD 116 Query: 118 GPRIGSFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRDLLGSQIQTAS--RSQALFEAI 174 +L Q + E++ Q + I+ LL ++ S + E I Sbjct: 117 QKNFLFYLQQLVEEVENHQEDYDLIIQNILEILLLKMMRKKSFNVEKTSTQKINKDIEFI 176 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 ++YI + + ++ +++A +I+ YLSH F+K + EYL TR+ +K LL+ + Sbjct: 177 KNYIKQHFHENISLDTLASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTN 236 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTE 277 + ++ GF ++F + F++ T SPS+YR +S + Sbjct: 237 YSISNISTITGFSSQSFFAQSFKRETNLSPSQYRNAINSSKNK 279 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 10/261 (3%) Query: 19 LRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFP 76 L + P + + F L V EG EF+ ++ D++ V + Sbjct: 20 LVNASSSHYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTE 79 Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 + + G + FS H ++ + + E+ + Sbjct: 80 ISLSASPLSYYTVGVDGISFSFHDQKE-----FQIFHYHQKHADLLFYFHSLFQELDEKN 134 Query: 137 Q-EQQTARLIVASLLSHCRDLLGSQIQ--TASRSQALFEAIRDYIDERYASALTRESVAQ 193 ++ + +A L+S R S Q + ++ Y+D Y+ + E +A Sbjct: 135 DGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLAS 194 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 +++ YLSH F + I YL H R+E K LL+ D ++ ++AH GF +Y Sbjct: 195 LSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLA 254 Query: 254 RLFRKNTERSPSEYRRQYHSQ 274 + FRK + EYRR +Q Sbjct: 255 QSFRKYCGMTAGEYRRSKKNQ 275 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 16/256 (6%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 + D L +L GE + + GD+++V + ++ Sbjct: 30 SADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLY 89 Query: 91 KQQLGFSVVQWDGKQYQNLAKQ-----HVARRGPRIGSFLLQTLNEMQMQPQEQQ----- 140 F+ + + + L + + R + + + +M + Q Sbjct: 90 INPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGSSW 149 Query: 141 -TARLIVASLLSHCRDLLGSQIQTASRS---QALFEAIRDYIDERYASALTRESVAQAFY 196 V LL R +++A +A+ Y+++ Y ALT VA+AF Sbjct: 150 LLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEAFR 209 Query: 197 ISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLF 256 ISP+YLS LF++T F++YLN R++ A+ LL+ D + ++A GF + ++F ++F Sbjct: 210 ISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGKMF 269 Query: 257 RKNTERSPSEYRRQYH 272 ++ + SP YR+QY Sbjct: 270 KRTVQLSPRAYRQQYR 285 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 19/283 (6%) Query: 1 MYHDVSY--LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGA 56 M + +Y L L + + L + Y+ + +L Y + + ++ EGE G Sbjct: 1 MLLNSNYEFLNEMLQHLQVHLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDGQ 60 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 VPG ++++PA + K F+ + +Q L + Sbjct: 61 DYRPVPGQLVHMPAHVLQSYSAVSDRPY-----SKYWCHFTATMGEMDLFQWLEIPPILD 115 Query: 117 RGPRIGSFLLQTLNEMQMQPQ---------EQQTARLIVASLLSHCRDLLGSQIQTASRS 167 P L + E+ Q E+ I+A LSH L Sbjct: 116 ISPDHTDSLTKLFRELVELYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEI 175 Query: 168 QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAK 227 + L + I +I+ + ALT E +A+ ++ PNYL F K A+ +YLN R++ AK Sbjct: 176 ERL-KQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAK 234 Query: 228 TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +LL DL +KE+A GF D+N+F + FRK SP+EYR + Sbjct: 235 SLLGTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 104/284 (36%), Gaps = 17/284 (5%) Query: 1 MYHDVSY-LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAG 57 MY ++ + P S+ I A + +P + D + V G +G Sbjct: 14 MYFELKENKPHGTKDNPFSIYHIENAGRSFQIPV--HWHDEFEIIYVKSGLLTVSISGES 71 Query: 58 ATLVPGDVLYVPAGGWN-FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH--- 113 GD V G + F+ LF + + F + Sbjct: 72 YIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLM 131 Query: 114 ----VARRGPRIGSFLLQTL----NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS 165 V + L+ +E + + Q ++I+ + S Sbjct: 132 INPRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTS 191 Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 + + + YI + + ++ + + F++S Y+S F++ I ++Y+ + RLE+ Sbjct: 192 GRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLEN 251 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 AK LL+ DL V E A G+ + +YF R F+K SP +YR Sbjct: 252 AKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRN 295 >UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NVM9_CHRVO Length = 272 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 138/271 (50%), Gaps = 4/271 (1%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGAT---LV 61 ++ L S ++ P +L+++ A + +P AYQV FPRLE+VL + + G L Sbjct: 1 MTPLPSFRLSWPSALQRLCHAPAGKHMPAGAYQVHFPRLELVLSNRYHYSHEGCENASLS 60 Query: 62 PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI 121 + L++PA W P W A +LF ++GFS+V+ + + K+ + Sbjct: 61 AQEALFIPAEHWTLPNWCANGEVLHILFDYARIGFSLVRSGPQGVISTHKESMVLAQRGS 120 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFEAIRDYIDE 180 + +L L + + + RL +LL+ + L + + LF AI YI E Sbjct: 121 LNGMLDVLAGLCRDGADPEVLRLQGQALLALLQSLYDEARDSQWQQGGNLFRAICLYISE 180 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + LTRE VA F IS +LS LF++ +GF E+L+H RL+ AK LL+ L + V Sbjct: 181 HLYAPLTREDVALRFSISATHLSRLFRQHLGLGFCEFLSHARLDLAKALLRQGQLPLSRV 240 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A CG+ D NYF R+F++ +P YRR++ Sbjct: 241 AARCGYADVNYFHRVFKQRFAMTPCAYRREF 271 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 103/274 (37%), Gaps = 11/274 (4%) Query: 3 HDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATL 60 ++ + L+N + + + + Y V + +L +L+GE Sbjct: 6 NEHEAIQQMLLNMQVQIWEAERTQCWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYP 65 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR-RGP 119 VPG ++ +PA + K FS D + L H G Sbjct: 66 VPGQLVLMPARTRQSYSVISGRPYL-----KYWSHFSATVGDSDVFSWLNVPHCYDLSGN 120 Query: 120 RIGSFLLQTLNEMQMQPQEQQTARL--IVASLLSHCRDLLGSQIQTASRSQA-LFEAIRD 176 L Q L + R ++ +LS + QI ++ Sbjct: 121 AEMPALFQQLVDAHRSDTLAARLREKSVMLDILSRVFEHQQPQIHADKMEDMGRLHKVQQ 180 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI +T E +A ++ PNY F++ I +YL+ R+E AK +L+ L Sbjct: 181 YIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLS 240 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +KE+A A GF +NYF + FRK SPSEYR Sbjct: 241 IKEIADATGFESANYFSKTFRKEVGYSPSEYRNN 274 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 20/278 (7%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVP 62 ++ +S N +R+ F + D L + GE + +VP Sbjct: 1 MNGTMSEYFNINKLIREAAFRMDET------HSHDCYELVYLFSGECNILVSHTIYRMVP 54 Query: 63 GDVLYVPAGGWNFPQWQAPATTFS----VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 G ++ +P G + + + + F + + ++ + Sbjct: 55 GTLVIIPPGEIHKTSYGSNDKVRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVP 114 Query: 119 PRIGSFLLQTLNEMQMQPQEQ--------QTARLIVASLLSHCRDLLGSQIQTASRSQAL 170 + ++ + M + Q +T + C+ + + Sbjct: 115 DKRKEYIENLITRMIYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNST 174 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + + Y+ Y + + VA+ F IS +YLS F++T GF EYL + R++ A LL Sbjct: 175 IQDVATYVYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLL 234 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + + ++A ACGF DSNYF FR+ SP++YR Sbjct: 235 LETNHSITDIAFACGFNDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 16/265 (6%) Query: 22 IYFA-SSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQW 78 +YFA + P + + + +V+ GE V+ G G V+ VPAG + Sbjct: 7 VYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLN 66 Query: 79 QAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQE 138 TT V+F QQ F + + + + +G R + + ++ + Sbjct: 67 SGRVTTVYVIFEAQQECF-----------DCSARILDVKGDRYAPGWFEQIVSLKTARLD 115 Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 ++ R ++ LLS+ +++Q Y++E Y ++ VA A +S Sbjct: 116 READR-LLGVLLSYLTGR-ENRLQREGGRSPAAARAMAYLEENYNRNISVAEVANACGVS 173 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P++L LF++ + LN R+ A+ LL L + E+ CGF +YFCR FRK Sbjct: 174 PSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCRAFRK 233 Query: 259 NTERSPSEYRRQYHSQLTEKPTTPE 283 +P EYR + +K + + Sbjct: 234 IHGCTPGEYRVALNRDHDKKVLSGD 258 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 15/277 (5%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDL-AYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVL 66 L++ + +I FA + + + + +L G + + LVPGD + Sbjct: 3 EILLSDKIKDYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFV 62 Query: 67 YVPAGGWNFPQWQAPATT--FSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF 124 +P + + +T +++ F ++L V + Sbjct: 63 LIPQSAMHRFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGN 122 Query: 125 LLQTLNEMQMQPQEQQTARL--------IVASLLSHCRDLLGSQIQTASRSQALFEAIRD 176 + + + + Q + ++ SLL RD + Q+Q ++ +A Sbjct: 123 ATRLFDTLYQETVGQDSCSQAVIPAYISLILSLLVRNRDHI--QLQDLDSAENAIQASAR 180 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI + ++ VA ++SP Y S F++ +GF EYL TRL A LL L Sbjct: 181 YISTHFQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLN 240 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 V E+A CGF D NYF FRK SP +YR++ + Sbjct: 241 VTEIAIRCGFNDGNYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 19/263 (7%) Query: 24 FASSNGPVPDLA-YQV-DFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 + S PVP+ + DF L + G ++ G TL G VL G ++ ++ Sbjct: 22 WCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFE 81 Query: 80 APATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ 139 A + G L ++ K Y ++ ++V L L ++ Q Sbjct: 82 ANTNCRELHIGLTNL--NLFSNVKKDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTYN 139 Query: 140 QTARLIVASLLSHCRDLLGSQIQ-------------TASRSQALFEAIRDYIDERYASAL 186 QT+ ++ SL+ LL +I + +AL E+I Y+ E Y + Sbjct: 140 QTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDI 199 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 + ++++ Y+SP Y+S +F++ YL RL AK LL L +K +A G+ Sbjct: 200 SLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGY 259 Query: 247 VDSNYFCRLFRKNTERSPSEYRR 269 D YF +L++K SP++ R Sbjct: 260 SDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 116/279 (41%), Gaps = 14/279 (5%) Query: 4 DVSYLLSR--LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGAT 59 ++ YL+ + L I + A+ F + + EG F + Sbjct: 3 NIRYLIDDKNFSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVN 62 Query: 60 LVPGDVLYVPAGGWNFPQWQAP-ATTFSVLFGKQQLGFSVVQWDGKQYQ-----NLAKQH 113 + D++ + + + + ++ G + + +++ N + Sbjct: 63 VKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVIN 122 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQT-ARLIVASLLSHCRDLLGSQIQTASRSQAL-- 170 + + I + L ++E++++ + + + +++ + + + S + + L Sbjct: 123 LKKNSSIILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNL 182 Query: 171 -FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 I++Y+D Y+ +T E+++ Y++ L H F K + YL R+ AK+L Sbjct: 183 ECAKIKNYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSL 242 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L+ + +K++ GF +S+YF ++F+K T SP +Y+ Sbjct: 243 LETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 108/285 (37%), Gaps = 17/285 (5%) Query: 1 MYHDVSY-LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAG 57 MY ++ + P S I A + +P + D + V G +G Sbjct: 1 MYFELKENKPHGTKDDPFSTYHIENAGQSFQIPV--HWHDEFEIIYVKSGFLTVNISGEN 58 Query: 58 ATLVPGDVLYVPAGGWNF-PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 PGD V G +F F+ LF + + F + Sbjct: 59 YIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLM 118 Query: 117 RGPRIGSFLLQTLNEMQMQPQEQQTARLI-----------VASLLSHCRDLLGSQIQTAS 165 P + + + ++ + +++ R + + + + S Sbjct: 119 ISPSVKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTS 178 Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 + + + YI + + ++ + + F++S Y+S F++ I ++Y+ + RLE+ Sbjct: 179 GRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEY 238 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 AK LL+ D+ V E A G+ + +YF R F+K SP +YR++ Sbjct: 239 AKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 109/279 (39%), Gaps = 13/279 (4%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAG--ATLVPGDVLYVPAGGWN 74 + + Y+ + + VL G L G ++++ AG + Sbjct: 14 YPVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRH 73 Query: 75 FPQWQAPATTFSVLFGKQQLG-----FSVVQWDGKQYQNLAKQH----VARRGPRIGSFL 125 F+V F +Q F + + + N+ + + L Sbjct: 74 RLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQCL 133 Query: 126 LQTLNEMQMQPQE-QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 + + E+ + ++ +L+++ L +L +++ + QA + YI + Y Sbjct: 134 RRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQ-QAYVKRALAYIHQNYDR 192 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ +A + ++ P YL +F+ +E+L R+ AK +LK D+ + ++ H Sbjct: 193 EVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYI 252 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 G YF F+K+ + +PSEYR+++ + + + Sbjct: 253 GMNSQQYFSTTFKKHVKCTPSEYRKRHQYNDNLRRKSED 291 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 111/264 (42%), Gaps = 7/264 (2%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYV 68 L I + + + + + V +G + D++ V Sbjct: 25 DFNKARPKLLYITESKFDHEWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIV 84 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 + + ++ G + + + + D +Q ++A + + + +L Sbjct: 85 NPLISHTERGIENVNFEYIVMGIEGVTYFSKEEDEEQGCSIANYYEYKH--EVLFYLKTI 142 Query: 129 LNEMQMQPQEQQT-ARLIVASLLSHCRDLLGSQIQTA--SRSQALFEAIRDYIDERYASA 185 L E++ + E Q+ + ++ LL + ++++ +++ I YID + Sbjct: 143 LFEVKTKDTEYQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKED 202 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 +T +++++ +++ ++ H F++ I Y+ RLE AK LL +L++ E+A+ G Sbjct: 203 ITLDTLSELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVG 262 Query: 246 FVDSNYFCRLFRKNTERSPSEYRR 269 F +YF + F+K T SP +YR+ Sbjct: 263 FTSQSYFAQAFKKATLTSPLQYRK 286 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 90/246 (36%), Gaps = 10/246 (4%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 ++ ++ + + +GE + + PG+++ + + ++ Sbjct: 42 SHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIVL--- 98 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ-----EQQTARLIVA 147 S V + R L + L E+ Q + + R ++ Sbjct: 99 YFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTLLN 158 Query: 148 SLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 L + I YI Y +T E +AQ FY+S YL F+ Sbjct: 159 MFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLCREFK 218 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + +Y+N TR+ +A+ L D + E++ GF + +F R+F+ T +PS Y Sbjct: 219 RYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTTPSGY 278 Query: 268 RRQYHS 273 R+ + + Sbjct: 279 RKHHQN 284 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 99/274 (36%), Gaps = 10/274 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVD--FPRLEIVLEGE--FVDTGA 56 M ++ ++ +S + + + L + L I G F G Sbjct: 1 MEISLNEIIDYYAKADVSFVGAFGERVSPQLKVLDRHTNPAGGGLVIPFSGSACFTFDGK 60 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 + PG V++ G + + + + + Q + +Y K Sbjct: 61 PYVIEPGMVVHAGPGMRLSKEVIGDREWEYAV-----IHYHIPQHERDEYPLFHKDFSLA 115 Query: 117 RGPRIG-SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 G L++ + ++Q P + V L + Q + L E Sbjct: 116 HGRSAKVPHLVRQILDIQSIPGAAAKFQTKVLFLSLLQEIFTAACGQPGQENSKLIEEAM 175 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 YI YA LT + VA F + S+LF++ + YL R+ AK LL Sbjct: 176 GYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRISKAKELLGSPGC 235 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 VK+VA G+ DS YF + F+K T SPSEYR Sbjct: 236 SVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYRE 269 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 3/261 (1%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAP 81 F N + + + L ++ G + PGD++ + + Sbjct: 24 FYHWNRSIRTMHQHENCIELNFMISGNGTHIVGNEICHTQPGDIIIYDSKVMHDESLMLD 83 Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT 141 + T + L + + L + + L + +P Sbjct: 84 SLTDACCIAVTGLKRPGARPNALLPPGLHPCIPCQSIAQELCTLYHIIERSLAKPHGYPA 143 Query: 142 ARLIVASLLSHCRDLLGSQ-IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPN 200 A +++ + + ++ A + L E +R YI++ YA AL+ +AQ F+ S + Sbjct: 144 ANAAAQTIVHLVWQQISERAVRAAGQENMLMERVRSYIEQHYAEALSIRDIAQEFHASRD 203 Query: 201 YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNT 260 Y++H F+ T +YL R+ A+TLL DL + EVA GF D NYF R+FR+ Sbjct: 204 YIAHAFKHTTNYAPLQYLRRWRIGKAQTLLIDTDLSLTEVASRVGFDDPNYFSRVFRQVI 263 Query: 261 ERSPSEYRRQYHSQLTEKPTT 281 P +RR + + ++ Sbjct: 264 GMPPGTFRRTWRAAQRKQQRA 284 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 20/279 (7%) Query: 14 NGPLSLRQIYFASSNGPVPDL-AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPA 70 P+ +Y + P L + D L +V EG F L G+ ++V + Sbjct: 13 GNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNS 72 Query: 71 GGWNFPQ--WQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA------RRGPRIG 122 G + P + +V+F + + +Y + + RR P G Sbjct: 73 GELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPG 132 Query: 123 SFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA--------LFEA 173 LL L+++ EQ + L + LL L S + + R + + Sbjct: 133 MELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKT 192 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 + +YI++ YA + + +A+ +S +Y F++ EY+N R++ A + L+ Sbjct: 193 VIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQT 252 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 D K+ EVA GF +YF +FR+ +P EYR + Sbjct: 253 DAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 23/257 (8%) Query: 36 YQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT--------TF 85 + DF + +L G ++ + GD++ + G + P+ Sbjct: 33 HSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGLC 92 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI 145 V FG + + + + + L + M ++ ++ R I Sbjct: 93 DVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRYI 152 Query: 146 VAS--LLSHCRDLLGSQIQTAS----------RSQALFEAIRDYIDERYASALTRESVAQ 193 + L+ LL Q + + + + I +Y ++ Y+ ++ + +A+ Sbjct: 153 MLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIAE 212 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY-DLKVKEVAHACGFVDSNYF 252 Y+SP Y+S +F+ +L + RLE AK LL+ D ++EVA G+ D +F Sbjct: 213 NMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYHF 272 Query: 253 CRLFRKNTERSPSEYRR 269 +LF+K PS+ RR Sbjct: 273 SKLFKKRFGMPPSKIRR 289 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 98/272 (36%), Gaps = 16/272 (5%) Query: 15 GPLSLRQIYFASSNGPVPDL-AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 P +I + A+ +F + +L G F + G+++ + G Sbjct: 2 DPNQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEG 61 Query: 72 GWNFPQWQAPATTFSVL--FGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + + + + F K L ++ + Q R + + Sbjct: 62 ALHRTTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLI 121 Query: 130 NEMQMQPQEQQTARLIVAS-----LLSHCRDLLGSQIQT------ASRSQALFEAIRDYI 178 ++ + Q T L +AS L+ L Q AS + E YI Sbjct: 122 SKAHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYI 181 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 Y S +T E A +S Y S F+ GF EYL R+ A LL L + Sbjct: 182 CSNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPIT 241 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 E+A GF DSNYF +F++ SP +YR+ Sbjct: 242 EIALLSGFNDSNYFGDVFKRMKGISPCKYRKN 273 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 13/276 (4%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVP 62 + + +I+ + Y N + ++ DF L +LEGE + G L Sbjct: 1 MLDTAAIIISQGKKIAYAYAEGVNDNM-TQSHFHDFFELYYLLEGERMHMIEGEIYHLTA 59 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVL--FGKQQLGFSVVQ--WDGKQYQNLAKQHVARRG 118 D + P + + ++ F + + K+ + + ++ + Sbjct: 60 NDFVLFPPHIMHHSYGEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQ- 118 Query: 119 PRIGSFLLQTLNEMQMQPQEQQTAR-LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDY 177 I S LL +E+ + + + LL + L +++ ++++ DY Sbjct: 119 --ILSLLLSLTHEIDVPGKYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRS--AKAVDY 174 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I Y ++ +A+ Y+SP +L H F+ +YLN TR+ HA+ L+ D + Sbjct: 175 IHNHYMEDISVNQLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNI 234 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 +++ GF + +F R F+K T +P E ++ Y Sbjct: 235 TQISREVGFSNLTHFNRTFKKITGVAPREKKKLYQK 270 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 11/246 (4%) Query: 35 AYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFPQWQAP--ATTFSVLFG 90 + + + +L G+ L PGD + +P + ++ A + + F Sbjct: 37 PHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYFT 96 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP-QEQQTARLIVASL 149 K++ + ++ + + + L+ + + QE + + SL Sbjct: 97 KEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQSL 156 Query: 150 LSHCRDLLGSQIQTASRSQAL------FEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 L L+G T +L YI+ +Y LT +++A +SP Y S Sbjct: 157 LFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTYFS 216 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 F+ + F EY+N+ R++ A LL+ D V +A ACGF D NYF +F+K T S Sbjct: 217 RKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTGLS 276 Query: 264 PSEYRR 269 P EYR Sbjct: 277 PREYRN 282 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 ++ D+ L + EGE + + PG+ L + Q V F Sbjct: 21 SKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQEN-----VPFK 75 Query: 91 KQQLGFSVVQWDGKQYQNLAKQH--VARRGPRIGSFLLQTLNEM-QMQPQEQQTARLIVA 147 + + FS + D Q + ++ V + R + + L+++ + Q Q + Sbjct: 76 RLLVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIH 135 Query: 148 SLLSHCRDLLGSQIQT--ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 +LL+ + IQT + + YI + Y ++ + +AQ Y+SP YL Sbjct: 136 TLLNMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCRE 195 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ +Y+N TR+ +A+ + + + E++ GF + +F R+F+ +PS Sbjct: 196 FKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPS 255 Query: 266 EYRRQYHSQ 274 +R+ Y ++ Sbjct: 256 NFRKMYKTE 264 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 91/248 (36%), Gaps = 11/248 (4%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 ++ + L +L GE + T+ GD++ V + VL G Sbjct: 32 PHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLFERVLIGFS 91 Query: 93 QLGFSVVQWDGKQYQN----LAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA-RLIVA 147 + + + + P I L L E Q + + R ++ Sbjct: 92 RTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYSSLVRSLMN 151 Query: 148 SLLSHCRD----LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 LL L + I YI + LT E VA+ FYISP+YLS Sbjct: 152 ELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAKQFYISPSYLS 211 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 +F + F EY+ R+ A+ +L V+ ++ GF +F + F+K + Sbjct: 212 RVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKTFKKIAGTT 271 Query: 264 PSEYRRQY 271 P +YR+++ Sbjct: 272 PLQYRKRH 279 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 7/166 (4%) Query: 116 RRGPRIGSFLLQTLNEMQMQPQ------EQQTARLIVASLLSHCRDLLGSQIQ-TASRSQ 168 R+ +L + L+E+ ++ + ++A + + L + ++ Sbjct: 348 RKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDELDRIAADLEVWRQQQAY 407 Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 +DYID YA LT E VA+ ISP Y S LF++ I F +Y+ + R+E AK Sbjct: 408 GKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKE 467 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 L D +KE+ + G+ D NYF R+F+K T SPSEYR++ ++ Sbjct: 468 ALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 7/268 (2%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPA 70 + L I + L + + + +G L D++ V + Sbjct: 16 MGRRPHLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHTDDLILVNS 75 Query: 71 GGWNFPQWQAPATTFSVLFGKQQL-GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ-- 127 + + + T F++ G L G + + + R + L + Sbjct: 76 DTLHDFKTSSSFTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHIFLRQLLKEVK 135 Query: 128 TLNEMQMQPQEQ-QTARLIVASLLSHCRDLLGSQIQTASRSQALF-EAIRDYIDERYASA 185 L ++ + E+ + + +L+ L I++YID Y Sbjct: 136 LLAALKGEDDERCEIGAALAQALVISVTALAEEDAGNEENPSFTMGTRIKEYIDAHYLED 195 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 L +A+A +I+ YLSH F+ +Y+ R+E A+TLL ++ + ++A CG Sbjct: 196 LKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLTTNMTITDIAMQCG 255 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + +SNYF +F P +YR+ + Sbjct: 256 YNNSNYFQSVFSNIVGMPPGKYRKAWAQ 283 >UniRef50_Q638V4 Transcriptional regulator, AraC family n=55 Tax=Bacillaceae RepID=Q638V4_BACCZ Length = 275 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 11/279 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M DV+ L L N P + +Y + N VP FP L G +F G Sbjct: 1 MKLDVNELAEYLANNPFRVEGVYRYAKNPGVPCAESTDSFPGFVFPLAGKTQFQFNGTPY 60 Query: 59 TLVPGDVLYVPAGGW--NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 L PG V++ A + + VL+ + + ++ L Q Sbjct: 61 ILSPGKVIHGGAKMTLAHKMLGEINWEYILVLYRISNSEREDSGFTHQHFELLTGQS--- 117 Query: 117 RGPRIGSFLLQTLNEMQMQP-QEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 PR+ L++ + + ++ L+ L + + S LFE I Sbjct: 118 --PRLVEVLMRLWDVYNQRGGISMLQTEMLFREALNEAL-LSVANRENDYESHTLFERIS 174 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 Y+ E Y +T ++ + ++ N LS++F+K +G EYL + R++ A+ +L + Sbjct: 175 SYVREYYYKDITIHTLTEQNNVNRNRLSYVFRKHAGMGPAEYLLNYRIKMAQKMLCTSGV 234 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 V+++A A G D YF R+F+K SP++YR ++ + Sbjct: 235 SVQQIAQAVGIADPFYFSRVFKKRVGISPTKYREKFINN 273 >UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA9D Length = 277 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 102/284 (35%), Gaps = 18/284 (6%) Query: 1 MYHDVSYLL-SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAG 57 M + L+ + L N L L + + + L + EGE Sbjct: 1 MDINHLKLIQNYLANANLRLSIAKVDKVSQNWRFFNMRPSYNALYFIREGEGWIKIDDQE 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 PG ++ +PAG + T F+ +Q + HV Sbjct: 61 YRPSPGQIVLMPAGSLHSISVVNDNTYRKF-----WCHFTAKVDTLNLFQLIHLPHVLDV 115 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQT-----ARLIVASLLSHCRDLLGSQIQTAS--RSQAL 170 S++ Q E+ + I+ L+ H D++ + + S Sbjct: 116 PDE--SYMEQLFKELIDAYRSSAWTAPLQRNEILMKLVRHYLDIVPDRQISLSMLPDMQK 173 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + YI+E ++ E +A + +PNY F+ + +Y+ R+E K LL Sbjct: 174 LNTVFQYIEEHINDNVSVEQLAGLIHYNPNYFIRFFKSKMKMTPVQYIIKVRIEKTKGLL 233 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 DL ++E+ G +Y CR+F++ T SP E+R Q S Sbjct: 234 MTTDLTLEEIGRQVGME-VHYLCRVFKQFTNMSPGEFRNQIMSN 276 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 13/250 (5%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVL--FG 90 + D + +L GE + + G ++ + + VL F Sbjct: 31 NHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFS 90 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT-----ARLI 145 K L S + +V ++ L++M + + Q T + + Sbjct: 91 KDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQVALQAL 150 Query: 146 VASLLSHCRDLLGSQIQ----TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + LL + + S S+ I YI+ Y + LT SVAQ F++S Y Sbjct: 151 LMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQYY 210 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LS F++ F EY+N+ R+ A+ LL+ + KV +++ A GF ++F R+F++ T Sbjct: 211 LSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEVTR 270 Query: 262 RSPSEYRRQY 271 SP YRR Sbjct: 271 FSPLNYRRLN 280 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 10/261 (3%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 + L + +G + G TL GD+ Sbjct: 28 YCVPGHTWGPGVRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADETDP 87 Query: 84 TFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTAR 143 +GF+ + Q + + + L + + + Sbjct: 88 WEY-----YWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCE 142 Query: 144 LIVASLLSHCRDLLGSQIQTA-----SRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 ++ L L + + A S S + YI Y+ ++ + +A+A +S Sbjct: 143 ALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVS 202 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 ++L +F +YL + R+ A +LLK +L + E+A + GF D YF R+F+K Sbjct: 203 RSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKK 262 Query: 259 NTERSPSEYRRQYHSQLTEKP 279 PS+Y + ++ P Sbjct: 263 VKGVPPSKYLATLEKEQSKLP 283 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 105/249 (42%), Gaps = 12/249 (4%) Query: 34 LAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 L + D + + +G F G L P L+V G + + + ++++F Sbjct: 35 LPHWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSL 94 Query: 92 QQLGFSVVQWDG-KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVAS-- 148 L K Q+++++ + + + ++ + +E+ ++ Sbjct: 95 SMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGY 154 Query: 149 LLSHCRDLLGSQIQTASRSQA-------LFEAIRDYIDERYASALTRESVAQAFYISPNY 201 L L + TAS + ++ D+I+ Y+S + + +A+ +S Y Sbjct: 155 LFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFY 214 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LF++ + +Y+N R+E A L+K +L + E+A GF + +YF ++F++ Sbjct: 215 FCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVG 274 Query: 262 RSPSEYRRQ 270 +P +Y++ Sbjct: 275 VTPFKYKKN 283 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 20/267 (7%) Query: 23 YFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNF--PQW 78 Y+ +Q D+ V+ G + GD++ + AG + + Sbjct: 24 YYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLIVES 83 Query: 79 QAPATTFSVLFGKQ---QLGFSVVQWDG------KQYQNLAKQHVARRGPRIGSFLLQTL 129 +P +V FG Q + S+ Q K + V R I L + Sbjct: 84 GSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNLV 143 Query: 130 NEMQMQPQEQQTAR-----LIVASLLSHCRDLLGSQIQTASRS--QALFEAIRDYIDERY 182 E+ + + ++ R L+++ LL L+ + + ++ +YI + Y Sbjct: 144 FELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYIHQYY 203 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 +A+ + +A A + P YL +F+ NEYL R++ AK LL D+ + EVA Sbjct: 204 DTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVAD 263 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRR 269 G YF LF+K T SP+EYR+ Sbjct: 264 HIGLNSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 105/289 (36%), Gaps = 22/289 (7%) Query: 1 MYHDVSY-LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAG 57 MY ++ P S I +P + D + V +G+ +G Sbjct: 1 MYFELKENRPHGTPENPFSQYHISDVKRAFQIPV--HWHDELEIIYVKQGKLHVTISGEN 58 Query: 58 ATLVPGDVLYVPAGGWN-FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---- 112 P D V G + A ++ LF + + F K + K+ Sbjct: 59 YIGSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLM 118 Query: 113 ---HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI---------VASLLSHCRDLLGSQ 160 + I L++ ++ + E+ A I + + Sbjct: 119 ISPQINDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLIL 178 Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 + + + + YI + Y ++ + F++S Y+S F++ I ++Y+NH Sbjct: 179 ENGTNGTNTTEKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNH 238 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 RLEHA+ LL+ V EVA G+ + +YF R F+K SP +YR Sbjct: 239 LRLEHARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 105/276 (38%), Gaps = 20/276 (7%) Query: 18 SLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNF 75 L Y A P ++ F V G+F L V+ + + Sbjct: 53 HLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVDSESLVLGQDQVILLNPNQVHA 112 Query: 76 PQWQAPATT--------------FSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI 121 P + + F+ L + + F + + R PR+ Sbjct: 113 PYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFYNYIYGISGASNYLMVDRTPRV 172 Query: 122 GSFLLQTLNEM-QMQPQEQQTARLIVASLLSHCRDLLGSQ--IQTASRSQALFEAIRDYI 178 + + E + +P +Q+ + +L + + + Q A ++ I +I Sbjct: 173 DQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSERKTNQPARPAKPGMAEIIGFI 232 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 E YA +T A+ F SP+YLS+L +K F E + R+E A LK L ++ Sbjct: 233 RENYA-TVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIVRDFRIESACNFLKNTQLTLE 291 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 +++ GF DS Y ++F++ SPSEYR++ Q Sbjct: 292 QISEILGFQDSFYIAKVFKQRYGISPSEYRKRSRQQ 327 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 92/264 (34%), Gaps = 21/264 (7%) Query: 34 LAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLF-- 89 + D L + G F PGD+++V G + Sbjct: 34 HLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNKGMIHTGFADDEHQVEYYALVF 93 Query: 90 ----------GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQ 139 G + + GK++ + I + Q + E + Q Sbjct: 94 HSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGY 153 Query: 140 QTA-RLIVASLLSHCRDLLGSQIQTASRSQ------ALFEAIRDYIDERYASALTRESVA 192 Q A + ++ LL H T S F+ + +++ Y LT + A Sbjct: 154 QVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFKELIAFVERHYPEKLTVQQAA 213 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 +S + F+K F EY+N R+ A+ LL + E+A GF NYF Sbjct: 214 GIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHSSDPITEIAFKVGFGSVNYF 273 Query: 253 CRLFRKNTERSPSEYRRQYHSQLT 276 ++FR+ SPS+ R++Y L+ Sbjct: 274 SQMFRQYKRHSPSQCRKRYARGLS 297 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 105/275 (38%), Gaps = 10/275 (3%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFP-RLEIVLEG--EFVDTGAGATLVPGDV 65 S N P + SNGP + L ++ EG E+ + GD+ Sbjct: 7 PSERENKPQLAYVSQVSESNGPYVRFMHMHPQTVELILITEGDGEYFIGDRIYPVRKGDL 66 Query: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH-VARRGPRIGSF 124 + + + ++ ++ G + ++ + ++ + + Sbjct: 67 VIYNSQVVHDEYLESGRPIGTICCGINNISCPGLRENALIPDDIVPVIPLYHHYATVEKL 126 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRD---LLGSQIQTASRSQALFEAIRDYIDER 181 + + E ++ ++ + LL + R + L ++I+ YID Sbjct: 127 MSSVFTVINQHAVEGPAMAQLLTQVVLKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRN 186 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG---YDLKVK 238 + + +++A F +SP Y+SH F++ +YL RL A++LL K+ Sbjct: 187 FYEPIRLDTLATKFNVSPYYVSHEFKRRYGYSPMDYLIKRRLGEAQSLLTTDKGGREKIT 246 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 +A+ GF + ++F F+ ++P +YR+ Y Sbjct: 247 SIAYRVGFSNLSHFQNYFKNKVGKTPGQYRKDYRK 281 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 102/263 (38%), Gaps = 14/263 (5%) Query: 21 QIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW 78 + P + + ++ GE + ++ GD++ + + Sbjct: 20 YYHRIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSG 79 Query: 79 QAPATTFSVLFGKQQLGF---SVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQ 135 ++ + G + + R + ++Q LN+M + Sbjct: 80 HGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADE 139 Query: 136 PQE-----QQTARLIVASLLSHCRDLLGSQIQTASRS----QALFEAIRDYIDERYASAL 186 +E + ++++ LL L S A+ S + +I YA + Sbjct: 140 IRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKI 199 Query: 187 TRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGF 246 T + +++ FYISP YLS +F++ YLN TR+ A+ LL DLK+ ++A + GF Sbjct: 200 TLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGF 259 Query: 247 VDSNYFCRLFRKNTERSPSEYRR 269 +F R F+K + S+YR+ Sbjct: 260 ESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 18/270 (6%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWN 74 L+ +G + + G G TL PG+ ++ +G + Sbjct: 16 FPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELH 75 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ-------NLAKQHVARRGPRIGSFLLQ 127 + P+ +++F L F++ + + + P +L Sbjct: 76 EIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILF 135 Query: 128 TLNEMQMQPQEQQTAR---------LIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYI 178 + E+ + I+ L + SQ + + +YI Sbjct: 136 HMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYI 195 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 E YA ++ +A+ ++SPNY H F++ ++N R++ A +L +L V Sbjct: 196 HENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVS 255 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 +VA + GF + +YF R FR+ +P+EYR Sbjct: 256 QVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 96/271 (35%), Gaps = 16/271 (5%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLY 67 + P + + +P + + L ++ G F VPGD+L Sbjct: 12 HGTADFPAGYYHVTESHPQYAMPY--HWHEELELIHIISGTFHVTINETTRNAVPGDILL 69 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR-----IG 122 V +GG + ++F L + + + P I Sbjct: 70 VNSGGLHGGT-PYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIH 128 Query: 123 SFLLQTLNEMQMQPQEQQT----ARLIVASLLSHCRDLLGSQIQTASRSQAL--FEAIRD 176 S L + MQ + + LL R S S + + + + + Sbjct: 129 SLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLN 188 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI+ Y +T +A+ +S Y H F + +Y+N+ R+E A LL G Sbjct: 189 YIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHS 248 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + ++A CGF D +YF R F+K SP +Y Sbjct: 249 ITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 108/289 (37%), Gaps = 14/289 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGA 58 M + R + L + D + + GE F + Sbjct: 1 MTITSLPNILRFGSISEPLWIEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ-------NLAK 111 + GD++ V + + ++ F + + + + Sbjct: 61 QIQSGDLILVNTNDVHRTSELSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPII 120 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQ-----TARLIVASLLSHCRDLLGSQIQTASR 166 + + + + L E+Q P Q A I+ H + Sbjct: 121 KLNLQERMHLEALFESLLRELQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTP 180 Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 Q I +I++ + L + +A+ F+IS +LS +F++ GF++Y+N TR++ A Sbjct: 181 VQQKVTDIIRHINQHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEA 240 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 + LLK D + +++ CGF + ++F ++F++ + SP +YR+ +Q Sbjct: 241 ELLLKETDWSITQISERCGFENFSHFGKVFKELSGLSPRDYRKLEQNQK 289 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 28 NGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF 85 + + + + + G+ F G A + P D++ + + ++ + Sbjct: 35 DTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSESGCE 94 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQ-----------HVARRGPRIGSFLLQTLNEMQM 134 ++ + + Q+ +N + I L + L E + Sbjct: 95 FIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRILKEREN 154 Query: 135 QPQEQQTA-RLIVASLLSHCRDLLG-----SQIQTASRSQALFEAIRDYIDERYASALTR 188 + L+V L L S + + + L +A +YI+ Y ++ Sbjct: 155 PDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISL 214 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + +A+ ++S +Y + F++ I YL R+E AK LLK D ++ ++A + GF + Sbjct: 215 KDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSN 274 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHSQLT 276 F +F+K + +P +YR+ + Sbjct: 275 QQRFNDIFKKYVKLTPLQYRKNVQVKKH 302 >UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5H4_9BACT Length = 285 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 8/284 (2%) Query: 1 MYHDVSYLLSRLIN-GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE----FVDTG 55 M + + L L + +++FA + R + GE + G Sbjct: 1 MIASLEQMTEFLERARQLPVERLFFAEPQPEPETWIHLHPCFRFIQPMTGEKEVRYAAGG 60 Query: 56 AGAT--LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH 113 T PG+V+ G W W SV+F ++ + + DG + Sbjct: 61 RIGTRLFHPGEVIIGRPGAWIDELWNHGHEMISVVFFEKYVRALYIGHDGLRPPQKGPDV 120 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-SRSQALFE 172 + + T+ + + + ARL + +LL +LL + +T+ + L+ Sbjct: 121 FFHTVRPADAAMHATIQALLAAGSDSRAARLNLRALLEMVLELLYRERETSIPEEELLWN 180 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 + DY+ + + ++RE +A I P LS L + + EYLN RLE+A LL+ Sbjct: 181 RVFDYLQYTFCNDISREDIAAGAGIHPARLSRLVRSRTGLAVREYLNRMRLEYAVQLLRE 240 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 L V+E+A CGF +YF RLFR+ SP E+RR+ + T Sbjct: 241 SRLPVEEIAVQCGFNYPSYFIRLFRRRYRISPGEFRRRKENGFT 284 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 8/274 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQV---DFPRLEIVL--EGEFVDTG 55 M + Y++S IN +Y +P Y D + +L +G+F G Sbjct: 1 MMINERYIISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFHANG 60 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA 115 LV GD + F + V G + + + N+ Sbjct: 61 KIYELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIK--AAAYLESANLNMNNLIFN 118 Query: 116 RRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG-SQIQTASRSQALFEAI 174 + + + +N + + ++ +LS D+ + T S Sbjct: 119 CTSEILKEYFFKIMNANLYSSGYELRLQGYLSIILSELIDISAMDILDTNKHSDIYVRKA 178 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YI+ Y+ + + ++VA+A ++ NY S +F+K I EY+ ++ A LK Sbjct: 179 LQYIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNS 238 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 L + E++ + G+ D F ++F+ SP YR Sbjct: 239 LTISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 105/271 (38%), Gaps = 13/271 (4%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYV 68 + NG + Y + + +P ++ + ++ G EF + GD++ + Sbjct: 5 QYDNGEGTFSVSYRKARSHNMPV-SHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVII 63 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHV-----ARRGPRIGS 123 + ++ + + + + ++++ + I + Sbjct: 64 SPNILHRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIET 123 Query: 124 FLLQTLNEMQMQPQEQQTARLIVASL-----LSHCRDLLGSQIQTASRSQALFEAIRDYI 178 L + EM + + L +A H + +++ S + Y+ Sbjct: 124 MLQTMIAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYM 183 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 + Y + L+ +A+ FY+SP YLS F++ F EYLN R++ AK LL+ +KV Sbjct: 184 NSHYMNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVN 243 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +A GF +F R+F+ T P YR+ Sbjct: 244 LIAKRVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 102/291 (35%), Gaps = 21/291 (7%) Query: 1 MYHDVSY-LLSRLINGPLSLR-QIYFASSNGPVPDL-AYQVDFPRLEIVLEGE--FVDTG 55 M L ++G Y+ + ++ + V+EGE F Sbjct: 1 MDQSFRQSLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDS 60 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAP--ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH 113 + G+ +++ G + Q + +++F L S + ++ Sbjct: 61 EYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQER 120 Query: 114 VARRGPRI----GSFLLQTLNEMQMQPQEQQTARLIV---ASLLSHCRDLLGSQIQTASR 166 A R+ LL+ + EM + + + L + ++ SR Sbjct: 121 RAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSR 180 Query: 167 SQ-------ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 S+ + + YI Y + +A +S F+ +Y+N Sbjct: 181 SEAADMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMN 240 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 R+ A LL+ D K+ ++A GF +YF R+FRK +PSEYR++ Sbjct: 241 SYRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 10/262 (3%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGW 73 L I + + F + + +G + + ++ + A Sbjct: 17 HFRLLSISASKFENDWTSFPHSHHFTEIFFIKDGTGRMLIENESLPVSSNSLVVIGAQVT 76 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + + G + L + + + + P I L EM Sbjct: 77 HTEFSDPENPLDYYVLGVEGLKLNTDKEPEYIHVPASANS-----PFIRQCFENILREMH 131 Query: 134 M-QPQEQQTARLIVASLLSHC--RDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 Q + + + + L+ + +D + ++ A S ++ +I+ Y S ++ +S Sbjct: 132 NKQDRYAEICQHYLDILILYFCRKDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDS 191 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A+ +S YLSH F + YLN RL A+ LL + ++E+A GF ++ Sbjct: 192 LAENCSLSKYYLSHRFAELYGKSPIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTS 251 Query: 251 YFCRLFRKNTERSPSEYRRQYH 272 YF + F+KN SP ++R+ + Sbjct: 252 YFSQSFQKNFHESPQQFRKSHR 273 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 11/246 (4%) Query: 35 AYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFPQWQAP--ATTFSVLFG 90 ++ + G + PGD++++ G + + + ++ F Sbjct: 19 SHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVTISFD 78 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVA--- 147 + L + + + + S + + + ++ + Q ++ Sbjct: 79 GEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLMKKGC 138 Query: 148 --SLLSHCRDLLGSQIQTASRS--QALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 LL ++ + EA YI + Y + +T E VA+ ++SP Y S Sbjct: 139 FYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMSPAYFS 198 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 F+ G+ EYL + R+ A LL V E+A CGF D NYF FRK S Sbjct: 199 RKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKAKGVS 258 Query: 264 PSEYRR 269 P +R+ Sbjct: 259 PRAFRK 264 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 18/265 (6%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 +P + + + G + GA + G V+ + + + Sbjct: 57 DKGPDMPSF-HIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIHKTASLGDSP 115 Query: 84 TFSVL--FGKQQLG--------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + ++ F ++ L + + +L ++ I S L Q L+ Sbjct: 116 SSRIVVNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAITVKQQNHIQSILQQMLDLEG 175 Query: 134 MQPQEQQTARLIVASLLSH-----CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 E Q R ++ + L C + S + E I+ YI + YA LT Sbjct: 176 ETSPEDQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNHIVEQIQAYIAQHYAEKLTL 235 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +A FYISP YLS LF+K+ + EY+N R++ A+ L++ + VA GF+ Sbjct: 236 TGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISSVAGQTGFMT 295 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHS 273 + +F R+F+ T SP +YR+QY Sbjct: 296 TAHFRRVFKDATGLSPQQYRQQYKR 320 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 15/275 (5%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVP 62 ++Y SR N + + + P + +F + I+LEGE ++ G Sbjct: 1 MNYTNSRTFN--PEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATA 58 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG 122 G V + Q +A + + G L + + ++ G + Sbjct: 59 GTVFLFNPRTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLE 118 Query: 123 SFLLQTLNEMQMQPQEQQT-ARLIVASLLSHCRDLLG---------SQIQTASRSQALFE 172 Q ++E+ Q E + +V LL + L +T R + L Sbjct: 119 KA-WQIVHELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVN 177 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 Y++ + +T E +A+ Y++P YLS F+ +G YL RL HAK LLK Sbjct: 178 HTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKN 237 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 L VKEVA G+ D+ +F +LF+K +SPS++ Sbjct: 238 DSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 6/241 (2%) Query: 35 AYQVDFP-RLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 ++ D L +V +G ++ G T G+++ + + + + + Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAI 60 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLS 151 L + D R+ L + + + A + +L++ Sbjct: 61 GGLRIDGLPADHLLPDGYCPVQPLRQHFAEVQSLFDAIEK--EAKSHAEIANYLTMALIT 118 Query: 152 HCRDLLGSQ-IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 L + +Q ++ L R +ID+ Y A+ +A A + + YLSHLF+ Sbjct: 119 KLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKAEI 178 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 + +Y+ R+ A+ LL D+ + ++A G+ +SNYF +F+ + +P EYRR+ Sbjct: 179 GLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYRRK 238 Query: 271 Y 271 + Sbjct: 239 W 239 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 13/251 (5%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVL--FG 90 + + L +L GE + + T G ++ + + +L F Sbjct: 29 PHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINFS 88 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQ-----PQEQQTARLI 145 + + + Q+ R + + L EM+ + + R + Sbjct: 89 HDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVRAL 148 Query: 146 VASLLSHCRDLLG----SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + LL L +Q + I YI+ + +T + +A FYISP+Y Sbjct: 149 LFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPSY 208 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LS +F+K EY+ H R+ AK L+ D K+ ++A GF ++F ++F++ Sbjct: 209 LSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIVG 268 Query: 262 RSPSEYRRQYH 272 P +YR++ Sbjct: 269 IPPLQYRKKSR 279 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 14/248 (5%) Query: 36 YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN--FPQWQAPATTFSVLFGK 91 + DF + V EG + GD+ +P G + P Q + Sbjct: 34 HTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIFR 93 Query: 92 QQLG---FSVVQWDGKQYQNLAKQH-------VARRGPRIGSFLLQTLNEMQMQPQEQQT 141 L SV+ K + L + + S + E + + Sbjct: 94 TCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYEF 153 Query: 142 ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + + S + YI++ +A+ LT + VA+ ++SP++ Sbjct: 154 LMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFMSPSH 213 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LF+KT + F ++L + R++ LLK ++ ++E A+ G+ D +F LFRK T Sbjct: 214 FQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKKTG 273 Query: 262 RSPSEYRR 269 +P EYRR Sbjct: 274 VTPREYRR 281 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 105/265 (39%), Gaps = 13/265 (4%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAG 71 N +L Y N + D+ ++IVL G +++ + G+++ + G Sbjct: 10 NFNPTLLYAYINMVNSESHVTLHTHDYTEVKIVLSGYFKYIIDDKLYEVAKGNIIIINPG 69 Query: 72 GWNFPQWQAPATTFSVLFGKQQLGF-SVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLN 130 + + +G + F + + + +L + P I + +T+N Sbjct: 70 VQHEKIIPSGVKVEEFNYGLTNIHFKELPENFLIEPSSLPVFTLPLYQPEIIKCINETIN 129 Query: 131 EMQMQPQEQ----QTARLIVASLLSHCRDLLGSQIQTA------SRSQALFEAIRDYIDE 180 E + +++ + + +LL + + S + I +Y+ Sbjct: 130 EQEKNEPYCDLFIKSSIMKLTALLHRGMTANKERTEKTRLDIQTSEKTNIVNDILEYLST 189 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 Y ++ +A Y+SP Y+S +F++ +L RL A+ LL ++ +K V Sbjct: 190 NYMEQISLYRIAHNMYLSPVYISKIFKEETGESPINHLIRIRLTKARELLMSGNMPIKTV 249 Query: 241 AHACGFVDSNYFCRLFRKNTERSPS 265 A + G+ D+ YF +L++K PS Sbjct: 250 ARSVGYEDAFYFSKLYKKYYGIPPS 274 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 97/277 (35%), Gaps = 7/277 (2%) Query: 3 HDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATL 60 + +++ + + + S + + +F + L+G + + Sbjct: 5 YTITHKPEEVSQNHFQVLSVNIVSYDANWHSTMHHHNFAEIFYCLDGSGYLLTEFGRTPI 64 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 +L V + + ++ G + + + + Sbjct: 65 HKHSLLLVNPFIEHTEHTSLISPLKYLVIGIKGPEIILPSHATDNGLFSFEDSNHQFYRL 124 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRS--QALFEAIRDYI 178 I + + QP Q ++ SL+ +L SQ+ A + A + YI Sbjct: 125 IREVMTEC---ELNQPYSSQIIDHLINSLILRLNNLANSQLAMARETPLSASVSLAKHYI 181 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 D ++ + E + + ++S +L+H F++ + YLN RL A+ LL + V Sbjct: 182 DNHFSKNINLEQLEERAHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQELLLTTNYTVL 241 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 ++ GF +YF F + +P YR + S L Sbjct: 242 QITEMVGFNSVSYFSNKFHEAVGMTPRAYRNLHASSL 278 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 102/284 (35%), Gaps = 27/284 (9%) Query: 9 LSRLINGPLSL--RQIYFASSNGPVPDLAYQVD-FPRLEIVLEG--EFVDTGAGATLVPG 63 +S + P SL + P ++ + F L +V EG FV G + PG Sbjct: 3 VSSRVLSPASLIGGSEFNCHEASPFQHPLHRHETFSELLLVEEGRGTFVVDGKPYEVGPG 62 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ------HVARR 117 VL G W+ F F +Q G + + Sbjct: 63 TVLLYHRGIWHEEWSTHY------PFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELGEK 116 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE----- 172 S + + L E+ E + A L L + S + + + Sbjct: 117 TDETASLVRECLAELHSGLAESRAAA---NHLFGLLLARLARLVPGESTERRIVKPAEAA 173 Query: 173 --AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 R YI+E Y +T E +A+ ++S YLSHLFQ+ I ++L R+E AK L Sbjct: 174 VIKARGYIEENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYL 233 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 VKE+ G+ F LF+K T +P ++R + Sbjct: 234 IMTGRPVKEIGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 101/272 (37%), Gaps = 26/272 (9%) Query: 25 ASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNF--PQWQA 80 + D+ ++ V +G F + GD+ +P + Sbjct: 36 YKLTYQQSLWTHCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDE 95 Query: 81 PATTFSVLFGKQQLG--FSVVQWDGKQYQNLAKQHVARR--------------GPRIGSF 124 + F + F D + ++ R+ + + Sbjct: 96 DIEIYGCEFMPSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNV 155 Query: 125 LLQTLNEMQMQ-PQEQQTARLIVASLLSHCR-----DLLGSQIQTASRSQALFEAIRDYI 178 L L E + + P Q + + + LLS +LL + + + + + + D+I Sbjct: 156 LKDMLIEYERRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHI 215 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 Y + + +S + LF++ FN YL R+ A +LK +L V Sbjct: 216 HNHYQEDMNLNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVT 275 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 +V ++ GF + +YFCR+F+K T SP+++R+Q Sbjct: 276 DVCYSTGFNELSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 17/282 (6%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVP 62 V + S +I++ N + + + + +E + G ++P Sbjct: 25 VVDSFETISFQKDSTIRIWYNEQNQNYDT--HWHNAIEIILPVENHYDVEASGQAYHILP 82 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQL----GFSVVQWDGKQYQNLAKQHVARRG 118 ++L +P+G + F LF + G++ +Q ++ K + Sbjct: 83 SEILIIPSGEMHALYAPESGKRFIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTTYPQIY 142 Query: 119 PRIGSFLLQTLNEMQMQPQ--EQQTARLIVASLLSHCRDLLGS-------QIQTASRSQA 169 + L+Q NE + E ++ +S R+ + + + Sbjct: 143 NDVYQLLVQMRNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEYLQ 202 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 F + DYID Y LT +++A S + + LF++ F +YL + R++ A+ L Sbjct: 203 KFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEEL 262 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 L +L + E+A GF + F R+F++ +PSEYR Y Sbjct: 263 LANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYRSLY 304 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 20/270 (7%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGW 73 + + +N + DF + I+ +G+ + G L GD+L G Sbjct: 10 NPQILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVK 69 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL---LQTLN 130 ++ + T + G + + K+ R+ + L Q + Sbjct: 70 HYDITEPGMTNAQLHIGFRNFTLEGYSRNT----FPFKKAFLRKKEEDSAILSISKQIIE 125 Query: 131 EMQMQPQEQQTARL--IVASLLSHCRDLLGSQIQT--------ASRSQALFEAIRDYIDE 180 E + ++ ++ R+ Q++ + Q L I Y+++ Sbjct: 126 EKDAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEK 185 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 + ++ +++Q YISP Y+S +F++ YL RL A+ LLK ++ VK+ Sbjct: 186 HHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQA 245 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSE-YRR 269 A+ G+ D+ YF +LF+K PSE +R+ Sbjct: 246 ANMVGYNDAYYFSKLFKKYYGFPPSENWRK 275 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 16/254 (6%) Query: 35 AYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 +Q D L V+ G+ GDV+ +P + ++ A +T Sbjct: 33 LHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYL 92 Query: 93 QLGFS--VVQWDGKQYQNLAKQHVARRGP-----------RIGSFLLQTLNEMQMQPQEQ 139 + FS +++ + + L + + P RI +L +NEM + Sbjct: 93 MVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLS 152 Query: 140 QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 R ++ + + L + R + I Y+ + Y ++ + +A+ ++ Sbjct: 153 AMFR-LLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNR 211 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 + F++ + F++++ RL A LLK V E+ + GF D +F R+F Sbjct: 212 SAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNT 271 Query: 260 TERSPSEYRRQYHS 273 SP++YR+QY + Sbjct: 272 MGMSPTKYRKQYKN 285 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 94/280 (33%), Gaps = 21/280 (7%) Query: 14 NGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAG 71 N ++ G + D LEGE F + G+ +++ G Sbjct: 17 NERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGG 76 Query: 72 GWNFPQWQAP--ATTFSVLFGKQQLGFSVVQWDGKQYQNL-------AKQHVARRGPRIG 122 + FS++F Q L + + +H+ R Sbjct: 77 DIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADL 136 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ----------ALFE 172 S L + M+ E V L + + + +RS + Sbjct: 137 SLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLK 196 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 + +I Y+ + +A +S F+ +Y+N R+ A LL+ Sbjct: 197 TVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLRE 256 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 + K+ ++A GF + +YF R+FRK SPSE+R++ Sbjct: 257 PERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 12/249 (4%) Query: 35 AYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATT-FSVLFGK 91 + + + + G +F G L G+ L+V +G + + ++++F Sbjct: 38 PHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFDL 97 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPR-----IGSFLLQTLNEMQMQPQEQQT-ARLI 145 + L + +Y I + + + + + + + + + Sbjct: 98 RLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKSL 157 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRD---YIDERYASALTRESVAQAFYISPNYL 202 + + + R E I+D YI++ Y L+ + +++ +S YL Sbjct: 158 LFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYL 217 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 LF+++ + EY+N R++ A LL D+ V E+A CGF + +YF ++F+K Sbjct: 218 CRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHT 277 Query: 263 SPSEYRRQY 271 +P ++R+Q Sbjct: 278 TPLKFRKQN 286 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 112/279 (40%), Gaps = 19/279 (6%) Query: 22 IYFASS-NGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN--FP 76 +Y NG V + + GE F T+ G+ L++P+G + +P Sbjct: 21 VYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYP 80 Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI------GSFLLQTLN 130 P + ++ + + +Y + K ++ S +L L Sbjct: 81 VSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQ 140 Query: 131 EMQMQPQEQQTARLIV--ASLLSHCRDLLGSQIQTASRSQ------ALFEAIRDYIDERY 182 Q Q+++ +V A+LL +L+ +T + + + +IDE Y Sbjct: 141 ATISQFQQKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHY 200 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 LT + +A +S + S F+ + EY++ RL A LL+ D + +++ Sbjct: 201 DEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISM 260 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 + GF +YF +LF+++ +PSE+RR +E T Sbjct: 261 SVGFDHPSYFIKLFKRHKRCTPSEFRRIGLPTFSENMKT 299 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 109/290 (37%), Gaps = 28/290 (9%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVL--EGEFVDTGAGA 58 M ++ + +N + + + DF +++ +G+F G Sbjct: 1 MCKEMYDITEGDLNPEFLFTCVSTRTEEEQ---NYHAHDFIEFAVIMGGKGKFYIDGKDY 57 Query: 59 TLVPGDVLYVPAGGWNF---PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH-V 114 + GD + + G ++ + + F G S + + + Sbjct: 58 EVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFS----GVSFKGCKSGYFPSFKGNGKI 113 Query: 115 ARRGPRIGSFLLQTLNEMQMQPQE-----QQTARLIVASLLSHCRDLLGSQIQ------- 162 + R+ + Q M + +E + + +L + Q Sbjct: 114 IKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGY 173 Query: 163 --TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 ++ + + + I Y++E Y ++ E +A Y+S Y++ +F+ YL Sbjct: 174 IFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIR 233 Query: 221 TRLEHAKTLLK-GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 R+E AK +L+ + +KEVA A G+ D+ +F +LF+K+ SP Y++ Sbjct: 234 LRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 98/266 (36%), Gaps = 17/266 (6%) Query: 22 IYFASSNGPVPDLA-YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW 78 IY S + + + + V +G G+ + V G + Sbjct: 69 IYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQ 128 Query: 79 --QAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ-------HVARRGPRIGSFLLQTL 129 +++F L + + + H+ P G+F+ Sbjct: 129 CGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIG 188 Query: 130 NEMQMQPQEQQTARLIVASLLSHCRDLLG-----SQIQTASRSQALFEAIRDYIDERYAS 184 Q+ ++ ++ V L L+ +S+ + + +Y++E Y Sbjct: 189 ILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGE 248 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 +T E A+ + S ++ F++ + F +YLN RLE A +L V VA C Sbjct: 249 KITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRC 308 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQ 270 GF + +YF RLFR+ ++P EYR+ Sbjct: 309 GFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSG8_9BACE Length = 281 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 103/280 (36%), Gaps = 17/280 (6%) Query: 1 MYHDVSYLLSRLINGPL-SLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAG 57 M H L P L + + + + + ++ G F+ G Sbjct: 1 MAHSQYPLHQFDAFPPQGRLLYLSTSVYEEDWASVVHSHPIAEIFYIINGRGVFMVDGVH 60 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 ++ D L + + + V+ G L S ++ Sbjct: 61 RSVKQYDCLIIAPNTPHTEKAFPGQPMEYVVLGVDGLTLS------DEHGKYFLDTFEEY 114 Query: 118 GPRIGSFLLQTLNEMQMQPQEQ-QTARLIVASLLSHCRD----LLGSQIQTASRSQAL-- 170 + ++L L E Q + + +++ LL L + IQ S++Q + Sbjct: 115 NDELLNYLNLMLKESQHEQFGSTAICQHLLSVLLLLVHRKSGLHLVADIQPTSKAQEVPP 174 Query: 171 -FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 +++YID Y+ +T +A+ YLSH F K + YL RL+ AK L Sbjct: 175 ECGRVKNYIDYYYSDNITLALLARIAGWDRFYLSHAFTKAYGLSPMNYLIKKRLDCAKEL 234 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 LK D + E++ GF NYF + F++ + +EYR+ Sbjct: 235 LKNSDHTIAEISQMLGFSSQNYFTQTFKRKVGITATEYRK 274 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 13/266 (4%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAP 81 + + L + +G F G + GD+ + Sbjct: 26 LERCAPGQTWGPGIRDHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQ 85 Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM----QPQ 137 +GF+ Q + L + QPQ Sbjct: 86 QPWEY-----SWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQ 140 Query: 138 EQQTARLIVASLLS-HCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFY 196 ++ + ++ R+ + TAS S YI Y+ ++ + VA++ Sbjct: 141 DEAAMVGYLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVG 200 Query: 197 ISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLF 256 +S ++L +F +YL R+ A LL+ +L + EVA + GF D YF R+F Sbjct: 201 VSRSHLYRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVF 260 Query: 257 RKNTERSPSEYRRQYHSQLTEKPTTP 282 ++ PS+Y + +Q P +P Sbjct: 261 KRAKGVPPSKY---FAAQQDADPASP 283 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 17/252 (6%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPA--TTFSVLFG 90 + + L ++ +G+ T+ GDV++V G + + + ++LF Sbjct: 38 LHWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFK 97 Query: 91 KQQLGFSVVQWDGKQYQ------NLAKQHVARRGPRIGSFLLQTLNEM-QMQPQEQQTAR 143 L S ++ NL V L +NE+ ++ + + Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 144 LIVASLLSHCRDLL------GSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 L V S L LL + ++ + I Y+ E + ++ E +A + Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S +Y F++T + F +YLN RLE A LL + +A GF + +YF R F+ Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 258 KNTERSPSEYRR 269 K +P +YR+ Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 18/279 (6%) Query: 10 SRLINGPLSL-RQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVL 66 R +G L + Y + + D L + G + GD++ Sbjct: 3 ERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELIYIESGSGLVRLNKEILRVKAGDLI 62 Query: 67 YVPAGGWNFPQWQAPATTF--SVLFGKQQLGFSVVQWDGKQYQNLA------KQHVARRG 118 V G + + + S++F L ++ +L H+ R Sbjct: 63 IVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRS 122 Query: 119 PRIGSFLLQTLNEMQMQPQEQQ-----TARLIVASLLSHCR--DLLGSQIQTASRSQALF 171 + + + +E++ + + S + + + ++S A Sbjct: 123 DDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLASI 182 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + I DYI+ Y+ LT + S Y LF++ Y+N R+E AK +L Sbjct: 183 KKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLL 242 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 D V E+A GF +++YF + F++ T SP ++RR Sbjct: 243 HSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRN 281 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 18/265 (6%) Query: 23 YFASSNGP-VPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 Y + N P + + + + V G E G + G + G + + Sbjct: 22 YRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPK 81 Query: 80 APATTFSVLF-------GKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEM 132 ++F Q + + + + + ++ + + Sbjct: 82 DNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAVIDAM--L 139 Query: 133 QMQPQEQQTARLIVASLLSHC-----RDLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 + +P + T + +L H G + + F+ + YI++ Y +T Sbjct: 140 EKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNIT 199 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 E +A ++ NY F++ EYLN+ R+E A L+ D K+ ++A CGF Sbjct: 200 LEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFN 259 Query: 248 DSNYFCRLFRKNTERSPSEY-RRQY 271 D +YF ++F+ +P +Y RR + Sbjct: 260 DYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 95/255 (37%), Gaps = 20/255 (7%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW---QAPATTFSVLF 89 + + L V GE + G PGD+L+V +G + P T ++++F Sbjct: 33 LHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVF 92 Query: 90 GKQQLGFS--------VVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT 141 LG +G + P + L+ E + +P+ + Sbjct: 93 NPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYEL 152 Query: 142 ARLIVASLLSH-------CRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQA 194 A LL +++ F+ + ++ A +T E A Sbjct: 153 AVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASF 212 Query: 195 FYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCR 254 ++SP + +F+K F +Y+N R+ A+ LLK + V ++A G N F + Sbjct: 213 VHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSK 272 Query: 255 LFRKNTERSPSEYRR 269 LFR+ SP + R+ Sbjct: 273 LFRQLRGVSPRDLRK 287 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 13/248 (5%) Query: 35 AYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQ-WQAPATTFSVLFGK 91 + D + V +G G T G V G + P F+ +F Sbjct: 34 VHWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPL 93 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF-----LLQTLNEMQMQPQEQQTARLI- 145 + + F + + H P + L+ L+E+ + + T R I Sbjct: 94 EFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELVEENGKMGTHRQIQ 153 Query: 146 ----VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNY 201 + ++ + + T + S L + I YI + Y + +++ F++S Y Sbjct: 154 VRIRLLQMMDLLVEYSQLEELTRNASGELEKEILLYIQDNYHDNIGLAELSEHFHLSEKY 213 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 +S LF + + +Y+N+ RL +A+ LL+ DL V E+A G+ + +YF R F Sbjct: 214 MSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMG 273 Query: 262 RSPSEYRR 269 SP YR Sbjct: 274 ESPLRYRN 281 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 105/270 (38%), Gaps = 25/270 (9%) Query: 34 LAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW--QAPATTFSVLF 89 + + + ++ +G F PGDVL+VPAG + + + ++++ Sbjct: 38 YLHWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVY 97 Query: 90 GKQQLG----------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ-MQPQE 138 + + +G+ + + L Q +E + QP Sbjct: 98 NSSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAY 157 Query: 139 QQTARLIVASLLSHCRDLLGSQIQTASRSQALF------EAIRDYIDERYASALTRESVA 192 Q + + LL+ + +A+ +YI+ +A T A Sbjct: 158 QLMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAA 217 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 + ++ ++ +F+K F +Y+N R+ A+ LL DL + E+A G +SNYF Sbjct: 218 RRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYF 277 Query: 253 CRLFRKNTERSPSEYRRQYHSQLTEKPTTP 282 ++++K +PS+ R+Q LT+ P Sbjct: 278 TKMYKKYKGVAPSQLRKQ----LTDTNKIP 303 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 18/254 (7%) Query: 36 YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 + + + +LEG+ + + G ++++ + P + +L Q Sbjct: 30 HLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGPGSHERILISLDQ 89 Query: 94 LGFSVVQWDGKQYQ---NLAKQHVARRGPRIGSFLLQTL-----NEMQMQPQEQQTARLI 145 FS + + + G L + L E+ + + + Sbjct: 90 NPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELHEKKPGFRHITMS 149 Query: 146 VASLLSHCRD--------LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYI 197 S L L + + + YI + Y AL+ E +A FY+ Sbjct: 150 KLSQLFILAQRHMSGPSSLSADLPLSTQPKHRKVDEVASYIIDHYDKALSLEIIAAHFYV 209 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 + YLS +F++ NEY+N R+ A+ LL + + EV+ + G+ YF R+F Sbjct: 210 NKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVSESVGYETITYFERVFH 269 Query: 258 KNTERSPSEYRRQY 271 + T+ SPS YR+QY Sbjct: 270 QYTQTSPSGYRKQY 283 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 23 YFASSNGPVPDLAYQVDFPRLEIVLEGEFVD-----TGAGATLVPGDVLYVPAGGWNFPQ 77 Y+ + D + V++G+ L GD + + AG + Sbjct: 23 YYFRQWINYKMDYHTHDRVEIMYVIDGQCEIDVATDNVNNLKLKKGDFILLDAGTVHRLI 82 Query: 78 --WQAPATTFSVLFGKQ---------QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLL 126 + ++ F +L V+ ++ + + I L Sbjct: 83 VLGEKSCRMLNIEFSFIEDSDILTSIRLLIEKVKSIALLFEMRCPFLLLKDNNDIYHSLK 142 Query: 127 QTLNEMQMQPQEQQ-TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + ++ M+ +E Q + +L+ LL + S + S S + +I Y Sbjct: 143 NIVIQLGMESEENQFSIQLLFYELLLKISKVAMS-NENTSTSNIYINKAKHFISMNYDKD 201 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 +T + ++ I+ +YL+ +F+K EY+ R+E AK LL D+ + ++ G Sbjct: 202 ITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVG 261 Query: 246 FVDSNYFCRLFRKNTERSPSEYRR 269 YF ++F+K T SP +YR+ Sbjct: 262 INSRQYFSQVFKKCTGISPYKYRK 285 >UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KE68_BACHD Length = 278 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 106/276 (38%), Gaps = 11/276 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPV---PDLAYQVDFPRLEIVLEGE--FVDTG 55 M D++ L + +G L++ +Y + AY L+GE FV G Sbjct: 1 MDVDLNELAGQFASGFLTVDGVYRTTLEAGRVLGHTRAYPTPKSGFLFALKGEASFVFNG 60 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA 115 L PG V++ PA L S D + L Sbjct: 61 TAYHLSPGKVVHGGKNME-LIVKVGPAAFEYCLIHYTLHTRSNHPNDTDSHFLLEPGENL 119 Query: 116 RRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 + L L+ ++ P + L+ ++ + SQ + E + Sbjct: 120 AITEK-----LDLLHRIKSTPGNFPEIQAKALFYTIFHDMLICARNRLNRESQLVIEQVV 174 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI Y +T + +A + S+LF+K + +YL RL+ AK LL + Sbjct: 175 EYIHHHYMEPMTVKKLADMSGMGVKPFSYLFKKYIGMFPIDYLIQYRLKRAKNLLVSSNS 234 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + ++A + G++D+ YF RLF+K+ SP+ +R Q Sbjct: 235 SIADIAESIGYLDALYFSRLFKKHIGCSPTAFRAQM 270 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 100/274 (36%), Gaps = 17/274 (6%) Query: 22 IYFASSNGPVPDLAYQ-V-DFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNF-- 75 ++FAS AY DF L +L G + + GD++ G ++ Sbjct: 17 VFFASKMRVTKRTAYHAHQDFTELTYILSGTSKYRIDDIYYDVKAGDMIVCNPGVFHQNM 76 Query: 76 -PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM 134 + P F F Q Q + L E + Sbjct: 77 LLDGEEPLVEFCTGFTDFQFKNMPENTIQLSNQGHIVHLSSEAKRETSRLCYDMLAENEA 136 Query: 135 QPQEQQ--TARLIVASLLSHCRDLLGSQIQTAS-------RSQALFEAIRDYIDERYASA 185 + ++ L+ R+++ + T + I +Y+ E Y Sbjct: 137 GQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFETYSKSYAVKRIINYLMENYEHK 196 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD-LKVKEVAHAC 244 ++ + +A Y+SP Y+S +F++ YL RLE AK +L + +K +A+ Sbjct: 197 ISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEILSEREGGSIKNIANEI 256 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 G+ D +F +LF+K SP YR+ +Q T + Sbjct: 257 GYDDVYHFSKLFKKYFGISPQNYRKSLIAQRTTE 290 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 105/296 (35%), Gaps = 21/296 (7%) Query: 4 DVSYLLSRLING-PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATL 60 D +L+ N P L + + + L + ++ V G + Sbjct: 20 DFKHLIDFDDNLLPFRLTETKVENGRPDI--LFHWHPELEIQYVYGGTARYHIDYDYFDS 77 Query: 61 VPGDVLYVPAGGWNF--PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 GD+ + G + P P T ++ F LG S+V +Y + + Sbjct: 78 QAGDIFLIRPNGLHSIHPVDNQPHHTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFK 137 Query: 119 P----------RIGSFLLQTLNEMQMQPQEQQTARLIVAS----LLSHCRDLLGSQIQTA 164 I L + ++ + + + LL R + Sbjct: 138 QCLRPSDEGYTEIKDLLFKIFKMIRQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDH 197 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 R I DYI++ YA LT E +++ S + +F++ E++ RL Sbjct: 198 YRKNEKIREIIDYINQHYAENLTIEKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLN 257 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 A L+ V E+A GF + + F R F+ +++PS+YR+ + ++ K + Sbjct: 258 AACEELRNSVKPVLEIATTVGFNNLSNFNRQFKHYYDQTPSQYRKTHSNKKKTKKS 313 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 116/292 (39%), Gaps = 20/292 (6%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPG 63 +++ P+ I+ A N P + D + VLEG+ + + L G Sbjct: 3 YEIINYDEKLPIK---IFVAKLNNYPP---HWHDEIEIVKVLEGKIKVSISESVCFLEKG 56 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVL-----FGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 ++ + + Q + ++ F + N++K Sbjct: 57 EMAIIKHKEIHQIQSLENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVA 116 Query: 119 PRIGSFLLQTLNEMQMQPQEQQ-----TARLIVASLLSHCRDLLGSQIQTASRSQ--ALF 171 + + + +N + ++ Q + + S++S+ + ++ + + Sbjct: 117 SNLKQLINEMINYLSVRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRM 176 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + I +YI++ Y + + ++A+ +++ Y++H F+K + +Y+ + R+ A LL Sbjct: 177 KKIIEYIEQNYMNEININTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLI 236 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 + + + +CGF + YF ++FR+ + SP EY+ + +K E Sbjct: 237 KNEDSITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQERSNKKVHESE 288 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 15/256 (5%) Query: 28 NGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF 85 + D L V +G EF L GD+L + + + Sbjct: 21 DSSWKMDYNVHDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAE 80 Query: 86 SVLFGKQQ------------LGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 ++ G + ++ H+ R+ + L L E + Sbjct: 81 FIVMGFYLKPESKSKIEALKEIYGFLESLENISSPFYFIHI-RKRSNVFFCLESILQEAK 139 Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + + + R++ +I+ + + I+DYID+ Y + +A+ Sbjct: 140 ENKKGLLLYIKSIELFIYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAK 199 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 ++S + +S LF+ I EYL R+E AK L +LK+ E+A CGF F Sbjct: 200 KLFMSESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFN 259 Query: 254 RLFRKNTERSPSEYRR 269 +F+K T SP+ YR+ Sbjct: 260 DIFKKYTGCSPTHYRK 275 >UniRef50_P77402 Uncharacterized HTH-type transcriptional regulator ydiP n=52 Tax=Enterobacteriaceae RepID=YDIP_ECOLI Length = 303 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 101/275 (36%), Gaps = 10/275 (3%) Query: 18 SLRQIYFASSNGPVPDLAYQVD-FPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWN 74 L + F+ + + D L V +G F + D++ + G + Sbjct: 21 RLSRFAFS-DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM 134 + F + + + A +G + L L+ + Sbjct: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 Query: 135 QPQEQQTARLI------VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 Q + QT+ L +A L Q + L + I Y++ Y +T Sbjct: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 E +++ F S +Y+ H F K I Y+ R+ AK L +L E++ G+ + Sbjct: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 ++F +LF ++ SPS+YRRQ+ + E+ E Sbjct: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 92/251 (36%), Gaps = 15/251 (5%) Query: 35 AYQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLF-GK 91 + + + + GE T GD++ + ++ Q+ + L Sbjct: 35 HHWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLSQSDHLFYYALIADF 94 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF-----LLQTLNEMQMQPQEQQTARLIV 146 L + ++ Q+ RI +L + E++ Q + A Sbjct: 95 SLLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKELERQEFGYELAIKSE 154 Query: 147 ASLLSHCRD-------LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISP 199 L L + ++ F I YI+E Y L+ E ++ +S Sbjct: 155 LYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSR 214 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 + S LF++ EY+N TRL A LL+ L V E+A A GF D YF R F+K Sbjct: 215 FHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKY 274 Query: 260 TERSPSEYRRQ 270 +PS R++ Sbjct: 275 KRMAPSALRKK 285 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 95/251 (37%), Gaps = 17/251 (6%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPA--TTFSVLFG 90 + D + ++ +G ++ GD+++V G + + ++LF Sbjct: 43 LHWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFK 102 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF----------LLQTLNEMQMQPQEQQ 140 L S ++ P I + + + + ++P Q Sbjct: 103 SSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQ 162 Query: 141 --TARLIVASLLSHCRDLLGSQIQTASRSQ-ALFEAIRDYIDERYASALTRESVAQAFYI 197 + L + + ++I+ ++ + I YI + + E +A + Sbjct: 163 LSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFY 222 Query: 198 SPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFR 257 S +Y F++T + F +YLN RLE A LL + ++A A GF + +YF R F+ Sbjct: 223 SKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFK 282 Query: 258 KNTERSPSEYR 268 K SP +YR Sbjct: 283 KKYGVSPRKYR 293 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 14/259 (5%) Query: 28 NGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQW------- 78 + ++ D L V+ G + + GDV +P + ++ Sbjct: 26 TTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADD 85 Query: 79 QAPATTFSVLFGKQQLGFSVVQWDGKQYQNL---AKQHVARRGPRIGSFLLQTLNEMQMQ 135 V F + + + + + + + G + + L++M Sbjct: 86 DGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDM 145 Query: 136 PQEQQTARL--IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + + + ++ ++ + + R + I Y+ Y ++ + +A Sbjct: 146 DELGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAA 205 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 ++ + F++ + F++Y+ RL A LLK +V E+ GF D +F Sbjct: 206 EVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFV 265 Query: 254 RLFRKNTERSPSEYRRQYH 272 R+F+ SPS+YRR++ Sbjct: 266 RVFKNTLGMSPSKYRRRFQ 284 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 14/259 (5%) Query: 28 NGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQAPA--- 82 + ++ D L V+ G+ GDV +P + ++ A + Sbjct: 26 EPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEYAADSADE 85 Query: 83 ----TTFSVLFGKQQLGFS---VVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQ 135 V F + S + + + + GP + +TL+EM Sbjct: 86 DGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKTLSEMNGM 145 Query: 136 PQEQQTARL--IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + + + + ++ + + + + ++ + I Y+ + Y ++ + +A Sbjct: 146 DELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSIALDDIAA 205 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 ++ + F++ + F++++ RL A LLK V E+ + GF D +F Sbjct: 206 EVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGFNDLPHFV 265 Query: 254 RLFRKNTERSPSEYRRQYH 272 R+F PS+YR+Q+ Sbjct: 266 RVFTSTMGMPPSKYRKQFK 284 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 100/293 (34%), Gaps = 19/293 (6%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLA-YQVDFPRLEIVLEGE--FVDTGAGATLV 61 + + L + + PD+ + + V EG + Sbjct: 6 LETTPNEEQRKHLLPYRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQ 65 Query: 62 PGDVLYVPAGGWNF--PQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR-- 117 GD++ + G + P + T + F LG SVV Y + V + Sbjct: 66 AGDIILIRPNGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVH 125 Query: 118 --------GPRIGSFLLQTLNEMQMQPQEQQTARLI----VASLLSHCRDLLGSQIQTAS 165 I + L + + + + + LL R ++ Sbjct: 126 CIKPHMPGYDDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTY 185 Query: 166 RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEH 225 R + DYI+ Y+ LT + ++Q S + +F++ E++ RL Sbjct: 186 RKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSK 245 Query: 226 AKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 A LL + E+A+ GF + + F R F++ +PS+YR++Y + Sbjct: 246 ACELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTKPKESR 298 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 115/272 (42%), Gaps = 15/272 (5%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLY 67 + P S ++ + P + D + + G T G Sbjct: 11 HGTKDYPYSQYHVFNQQTAFQFP--IHWHDELEIIYIRNGSINITIDNELFTGTGGSFFI 68 Query: 68 VPAGGWNF-PQWQAPATTFSVLFGKQQLGF-SVVQWDGKQYQNLAKQHVARRGP----RI 121 V G ++ A +++LF + + F S + ++ + HV I Sbjct: 69 VNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEI 128 Query: 122 GSFLLQTLNEM-----QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRD 176 + ++ L ++ + Q ++++ +LS+ + ++ S + + I Sbjct: 129 YAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMRREIIT 188 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 Y+++ Y +T +A F++S Y+S F+K I F++Y+NH RL +AK LL ++ Sbjct: 189 YVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNIS 248 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 + +VA + GF + +YF R F+++ ++P YR Sbjct: 249 ITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 100/286 (34%), Gaps = 20/286 (6%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVP 62 + P SL +Y + + + D+ + V G F + + P Sbjct: 4 IHKRFEETDKFPFSL--VYRDTKSPQRELPDHLHDWYEIVFVYSGTGTFFINHSFYEMNP 61 Query: 63 GDVLYVPAGGWNFPQWQA--PATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGP- 119 GD +P + P T+ ++ F + + + + ++ Sbjct: 62 GDAFLIPGNTVHRAFPDEFSPVTSSAIFFAPRFIQPMEFGESHSLLRCFEQARKSKSYKL 121 Query: 120 -------RIGSFLLQTLNE--MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQ-- 168 S L+ +NE + P + + + L + ++ + S Sbjct: 122 ETSPDKREAFSGLIDVMNEEWLNRLPSYRAAIAVRLYDFLIALNRMALTETEHTRSSSAE 181 Query: 169 -ALFEAIRDYIDERY-ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 + I DYID + ++ ++ ++ + S +F++ + +EY+ ++ A Sbjct: 182 PSWIRTILDYIDAHIGSQEMSLADLSSKASVTYAHFSRVFKQHTGMNVSEYILIKKIMLA 241 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 K L + V ACGF +YF + F+ T +P EYRR Sbjct: 242 KEKLMLTGDTIASVCLACGFESESYFYKKFKLITGMTPVEYRRSCR 287 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 89/247 (36%), Gaps = 12/247 (4%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + L + G + G GD++++ + + ++F Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPS 115 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP-----QEQQTARLIVA 147 L + ++D R + L + L M + R + Sbjct: 116 LLSIDL-KFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 148 SLLSHCRDLLGSQIQT----ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLS 203 LS L S Q R + + ++ T + ++ ++SP+ S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFS 234 Query: 204 HLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERS 263 LFQ+ + YL RL HA LL+ D K+ E+A CGF + + F RLF+++ S Sbjct: 235 ALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGAS 294 Query: 264 PSEYRRQ 270 PSE R + Sbjct: 295 PSEIRER 301 >UniRef50_A5N028 Transcriptional regulator n=12 Tax=Clostridiales RepID=A5N028_CLOK5 Length = 283 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 12/279 (4%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M ++ L+ ++ ++ +Y FP + G +F Sbjct: 1 MEIKLNELVEHFVHSCFRVQGVYHYKIEPGTARWQKSTPFPGFIFPMGGKAQFHFNDTPY 60 Query: 59 TLVPGDVLYVPAGG-WN-FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 G++++ A + SVL+ Q + + ++ Q Sbjct: 61 LAGVGNIIHGGANMSLHKRVVGNGKWQYISVLYDIQD-----SKQEKICLRDAHFQINIG 115 Query: 117 RGPRIGSFLLQTLNEMQMQPQEQQ-TARLIVASLLSHCRDLLGSQIQTASRSQALFEAIR 175 + PR+ L + + L + S+ QT + +Q LF+ + Sbjct: 116 QSPRLTELLWRLWKTFNEPGALPAFQTETLFRCTLEEV--FICSRNQTNNSAQTLFQQVS 173 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 YI + Y LT +A+ ++ N L ++F K +G +Y+ RL K LL Sbjct: 174 AYIHDHYMDILTVRGLAEQNGVNENRLFYVFSKYAGMGPGDYIMAYRLNRGKELLITSSA 233 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 V+EVA + G+ D+ YF R FRK SPS R ++ + Sbjct: 234 PVREVAKSVGYPDALYFSRSFRKRFGISPSGLREKFRNN 272 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 13/243 (5%) Query: 35 AYQVDFPRLEIVLEGE---FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 + DF + ++LEGE + + + G V+ G + + + G Sbjct: 29 MHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHCELQPKGTRSHQLHIGL 88 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARL--IVASL 149 + + + + ++ + + + ++ Q + E + E Q + ++ L Sbjct: 89 KNISLEGFKRNFFPNKHPLLE-LGKYHHQVLEKAWQLVRESSEERDEFQLMQKAVLMEML 147 Query: 150 LSHCRDLLGSQI-------QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 + R L I ++ R Q + Y++ Y +T E +AQ ++SP YL Sbjct: 148 VYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFLSPTYL 207 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 S +F++ + YL RL+ AK +LK +L +KEVA A G+ D+ +F + F+K Sbjct: 208 SKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFKKLYGV 267 Query: 263 SPS 265 SPS Sbjct: 268 SPS 270 >UniRef50_C6D132 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D132_PAESJ Length = 289 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 96/270 (35%), Gaps = 25/270 (9%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQWQAP 81 F + P VD L I+ GE G L GDV + + + Sbjct: 17 FVAYTSPWIHFKRNVDEYILYIIKSGELHIEENGERYVLRRGDVFMLEPNLDHEGFEKHV 76 Query: 82 ATTFSVLFGKQQLG--------------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + F + F Q + +H + S Sbjct: 77 CDYYYIHFKHPDIQTVHIEDMESYARSFFLEDQEPEAGCSHGFPKHFNLANVNVRSQAYN 136 Query: 128 TLNEMQMQPQEQ---------QTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYI 178 LNEM + + A L V ++ + L S + ++ +A + DYI Sbjct: 137 HLNEMGQLYLRKNYNRSMTALKLAELFVQLSRAYLAEHLQSARKRTTKGEATAYELLDYI 196 Query: 179 DERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVK 238 + Y +T + F + +YL+ +F K Y+N R+ A+ LL+ + + Sbjct: 197 HQHYPDKITGSDIEARFDCNFDYLNRIFNKITGCSITHYVNKVRVNRARELLEKTHMTIG 256 Query: 239 EVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 EVA GF D YF ++F+K SP+ Y+ Sbjct: 257 EVAELVGFSDIYYFSKVFKKYVGLSPAYYK 286 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 91/245 (37%), Gaps = 10/245 (4%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 ++ ++ L + G+ + L G+ + P + + V F + Sbjct: 22 SHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSG-----VSFKRL 76 Query: 93 QLGFSVVQWDGKQYQNLAKQH---VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASL 149 L F+ ++ QH LL+ L + Q L Sbjct: 77 VLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFILN 136 Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 L S Q+ +I Y+ E Y +T +A+ FY+SP YL F+K Sbjct: 137 QILILLLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKY 196 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +Y+N R+ HA+ L D V E++ GF + +F R++R T SPS+ R+ Sbjct: 197 TNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRK 256 Query: 270 QYHSQ 274 Q + Sbjct: 257 QAKER 261 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 93/234 (39%), Gaps = 7/234 (2%) Query: 41 PRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSV 98 +L + G EFV GA T+ G+++ G + + +F G+ Sbjct: 49 YQLLYIASGKAEFVLNGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPE--VFWVHFTGYEA 106 Query: 99 VQWDGKQYQNLAKQHVARRG--PRIGSFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRD 155 + +L + R G R L + E+Q+ +P + L LL Sbjct: 107 ADLLSRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFKELLLTVER 166 Query: 156 LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 + + + Q E + E +++ + A + ++S + F++ + Sbjct: 167 QIAEGGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQYVGVPPL 226 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +YL R+ AK LL+ D V E+ G+ + YF R+F+K T SP+ YR+ Sbjct: 227 QYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 106/283 (37%), Gaps = 29/283 (10%) Query: 23 YFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQA 80 Y S + + + D L + +GEF + + ++ + +F + Sbjct: 23 YTESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDKHVVHEETICFINSEELHFIKSNH 82 Query: 81 PATTFSVLFGKQQLGFSVVQWDGKQYQ------NLAKQHVARRGPRIGSFLLQTLNEMQM 134 P +++F + L F + L H + + G +L+ +E+ Sbjct: 83 PCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFKKDKHGEEILKEYSEILE 142 Query: 135 QPQEQ---------------------QTARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 + + + L + ++L L+ + + Sbjct: 143 AYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLLIKENNKNKDYRVEYIKT 202 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 YI Y+ + + +++ ++ Y F++ EY+N R++ AK LL+ Sbjct: 203 AISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYVNEYRIKKAKELLRET 262 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 + +V ++ CGF + F ++F+K+T +P +YR+ + ++ + Sbjct: 263 NRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFINKKS 305 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 92/251 (36%), Gaps = 14/251 (5%) Query: 36 YQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ 93 + L+ EG G PGD + + + + V Sbjct: 29 HCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTLIRNSDCKLLGVQMDLSV 88 Query: 94 L--GFSVVQWDGKQYQNLAKQHVARRGPRI--GSFLLQTLNEMQMQPQ------EQQTAR 143 L FS + +R R+ GS L L+E+ ++ Q E Sbjct: 89 LDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSEILVEYQKKQPGYEMYIKG 148 Query: 144 LIVASLLSHCRDLLGSQIQTASRSQAL--FEAIRDYIDERYASALTRESVAQAFYISPNY 201 I+ R + + Q L + + DY+++ + L+ + A+ +S + Sbjct: 149 DILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIETELSVAAAAKIACMSYYH 208 Query: 202 LSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTE 261 LF+K F EY N R+ A+ LL D + +A GF YF R+F+K T Sbjct: 209 FCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAFETGFGSVAYFNRVFKKETG 268 Query: 262 RSPSEYRRQYH 272 ++P+ YR++ Sbjct: 269 QAPANYRKKMR 279 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 19/267 (7%) Query: 21 QIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT------GAGATLVPGDVLYVPAGGWN 74 Y+ +Q D + ++ G L G+ + + AG + Sbjct: 20 YAYYYKQWMNYEMPYHQHDSTEIMYMISGVCRIDVKAGDTEKSVILKKGEFMVLDAGVPH 79 Query: 75 FPQWQ--APATTFSVLFGKQQLGFSVVQWDGK---------QYQNLAKQHVARRGPRIGS 123 A +V FG + + + V + Sbjct: 80 RLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLLKRPFRYLVLADQEEVYP 139 Query: 124 FLLQTLNEMQMQPQEQQTA--RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDER 181 L + E+ + + + L + L+ R + +S + DY+ + Sbjct: 140 VLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERERSDMQQSDFYIKRSVDYLHQN 199 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y + + VA + P YL +F++ EYL R+E AK LL+ D+ + E++ Sbjct: 200 YDRQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIRMEKAKMLLEQTDIPIHEIS 259 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYR 268 G YF LF+K T +P EYR Sbjct: 260 DYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 107/283 (37%), Gaps = 18/283 (6%) Query: 10 SRLINGPLSLRQIYFASSNGPVP-DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVL 66 L + + G + + L + GE + + GD++ Sbjct: 6 ELFYGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLV 65 Query: 67 YVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQN-------LAKQHVARRGP 119 +PA + ++ + F + + + + Sbjct: 66 LIPANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERL 125 Query: 120 RIGSFLLQTLNEMQMQP--QEQQTARLIVASLLSHCRDLLGSQIQTA------SRSQALF 171 R L L E+Q +P E + +LL R + ++ + S + A Sbjct: 126 RFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKA 185 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 I Y+ + + LT +S+++ F++S +YLS F+K G EY+ TR++ A+ L+ Sbjct: 186 MEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLR 245 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 D ++ E+A GF + F R+F+ + SP +YR QY + Sbjct: 246 ETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 97/267 (36%), Gaps = 14/267 (5%) Query: 29 GPVPDLAYQVDFPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF- 85 +Q L V+ G + + G+V+ +P + ++ T Sbjct: 18 PDEQIGLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIPPEIPHCWYFEDDDTDEQ 77 Query: 86 ------SVLFGKQQL---GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 +V F L + + G + K + ++ L EM Q Sbjct: 78 GRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDKEKSEAIIDLLEEMCNQS 137 Query: 137 QEQQTARLIVASLLSHCR--DLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQA 194 + ++ A +I L+ + + + Q + I+ Y+ +T + VA+ Sbjct: 138 EAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTYVICNAKRDITLDDVARY 197 Query: 195 FYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCR 254 ++ F+K F YLN R+ A LLK + V E+ + GF + YF R Sbjct: 198 VGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTVSEICYNVGFNNVPYFNR 257 Query: 255 LFRKNTERSPSEYRRQYHSQLTEKPTT 281 F+++ SP EY++ + EK T Sbjct: 258 TFKRHKGVSPCEYKQGGKADANEKKNT 284 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 100/280 (35%), Gaps = 10/280 (3%) Query: 2 YHDVSYLLSRLINGPLSLRQIYFAS-SNGPVPDLAYQV-DFPRLEIVLEGE--FVDTGAG 57 + +Y L +Y A +P ++ D ++ EG + G Sbjct: 3 FISSNYKPVFTSEAMPRLVTLYRAETPYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQR 62 Query: 58 ATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ----WDGKQYQNLAKQH 113 GD+L + + A + L + L + Sbjct: 63 YYTQKGDLLLIGQDVVHDESSPANRNLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKTEG 122 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 + + F+ + P+E + ++ +LL ++ + L Sbjct: 123 LFPDFCHLLEFMYRGAQGKGCHPEE--SINHLLCALLLLVMEVTSRSVVLPPEEHHLLAG 180 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 +R +D Y +T +AQ F++S +L+H F+ +Y+ R+ A+TLL Sbjct: 181 VRSRLDAAYDETITLAGLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDT 240 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 L + E+A G+ S+YF + F K T SP +YR+ Y Sbjct: 241 ALPITEIAIRTGYNSSSYFNKAFHKITGMSPRDYRKTYRK 280 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 19/263 (7%) Query: 27 SNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT- 83 N L ++ F L V G T+ G++L + + P+ Sbjct: 63 ENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQDC 122 Query: 84 TFSVLFGKQQLGFSVVQW--DGKQYQNLAKQHVARRGPRIGSFLL-------QTLNEMQM 134 F+++F + +S+ D + + + + + T+ + + Sbjct: 123 VFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASADTIERLIV 182 Query: 135 QPQEQQTARLIV-ASLLSHCRDLLGSQIQT-----ASRSQALFEAIRDYIDERYASALTR 188 + E+Q+ + SLL L + + L I YI E A +T Sbjct: 183 ECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQESPAE-ITL 241 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + V++ F S YLS + ++ F+E + RL AK L+ L + ++A G+ D Sbjct: 242 QKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYND 301 Query: 249 SNYFCRLFRKNTERSPSEYRRQY 271 ++F ++F++ +P+EYR+ Y Sbjct: 302 VSHFYKVFKQEIGCTPTEYRKHY 324 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 108/295 (36%), Gaps = 27/295 (9%) Query: 8 LLSRLINGPLSLRQIYFASSNG--PVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPG 63 L +R ++ I + ++ DF L V+ G V G L G Sbjct: 74 LDNRFLSRNFRPSDILINAHIPFFNRSPQPHKHDFFELVYVVRGSMKNVVDGRRILLEQG 133 Query: 64 DVLYVPAGGWNFPQWQAPATTFSVLFGKQQL---GFSVVQWDGKQYQNLAKQHVARRGPR 120 D + + + K++L F + + + + N + + + Sbjct: 134 DFCLMNPNAVHQVETDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNK 193 Query: 121 ---------------IGSFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRDLLGSQIQTA 164 I +LLQ E + Q Q+ ++ L +++ Sbjct: 194 QNYLVFSARHLEEPIISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFE 253 Query: 165 SRSQ---ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 S I Y+ E Y +A T ++ A+ F P YL +L +K F+E + Sbjct: 254 SLQDLPGGNISKIISYLSENYRTA-TLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQF 312 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 RL HA LLK +L + +VA G+ + YF ++F++ SP++YR Q + Sbjct: 313 RLAHACELLKQTELPISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQAPRP 367 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + +LS +L Q + A + YI E YA LT E V+ S +Y S L Sbjct: 409 LRGMLSEAMQVLSEQKRQADTRP--IRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSL 466 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K F EYL+ R+ AK LL+ +L V EV G+ D YF + F+K T P Sbjct: 467 FKKETGQNFLEYLSEVRMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPG 526 Query: 266 EYRRQY 271 E+R+ Y Sbjct: 527 EFRKLY 532 >UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FW59_9FIRM Length = 292 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 110/288 (38%), Gaps = 19/288 (6%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M ++ S +IY+ + + D+ LEG G Sbjct: 1 MAKNLQTKFSTRQYMLSRDFEIYYYNEPASEKVSIHSHDYYEFYFFLEGDVSIWIEGEQY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAP-ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 L GD++ +P G + +F + + Y L + + ++ Sbjct: 61 PLKYGDMVLIPPGIKHMAMVHGNEIPYRRFVFWISVEYCNQLMEVSSSYGYLMQNVLVKK 120 Query: 118 ----------GPRIGSFLLQTLNEMQMQPQEQQTARLI-VASLLSHCRDLLGSQ--IQTA 164 I + Q + E++ + ++ + V L+ ++ Q ++ Sbjct: 121 KYIFHNDLITFNTIQYRIFQLIEEIKSERFGKEAKVSLCVNDLVLQLNRIVYEQQNPKSE 180 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 Q L++ I YID+ L+ E +A F++S +++H+F++ + ++Y+ R++ Sbjct: 181 KEEQNLYQNIIYYIDDHLDEELSLEQLAGQFFVSKYHIAHIFKEQMGLSVHQYILKKRMQ 240 Query: 225 HAK-TLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +K +L + +V GF D + F R F+K SP EY+ + Sbjct: 241 ASKAAILGET--SITDVYTMFGFKDYSSFYRAFKKEFGVSPKEYKEVH 286 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 103/275 (37%), Gaps = 8/275 (2%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVP 69 + N L R F +G + L +VLEG F TL P D + V Sbjct: 9 IPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVN 68 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR-RGPRIGSFLLQT 128 + + P +++ F D + K + R + + + +T Sbjct: 69 PNEIHSIECPDPN--ITIVLQIPMKSFEGYMSDESRITFADKDESQKARLVALVTAMYRT 126 Query: 129 LNEMQ---MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + + + Q + + + + R + Y+ E Y Sbjct: 127 YEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYMKENYDKE 186 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 L+ E VA F +P+YLSH+F++ G+ YL R+++A L D V ++A G Sbjct: 187 LSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALDHG 246 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 F D+ F + F+K PS+YR+Q + + + Sbjct: 247 FADARAFAKAFKKRYGCLPSQYRKQMNQKQVNQKQ 281 >UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6B0_PHYPA Length = 404 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 13/251 (5%) Query: 38 VDFPRLEIVLEGEFVDTGAGATLV--PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLG 95 L + + G + L PG + +P G + V F + Sbjct: 59 HHC--LALPITGSVSLNASDGCLQAGPGHMYCIPPGSKHTYTVDKG-----VPFRCYWVR 111 Query: 96 FSVVQWDGKQYQNLAKQ-HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHC- 153 F + + +++L A P + L + ++ AR I+ L++ Sbjct: 112 FELDAGSTEFFKSLQLPLSAAVDEPDQLEARYRRLISLSGNITDELRARAIIMELIAVYL 171 Query: 154 -RDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAI 212 R L G + +LF I +YI++ A L+ + +A+ Y+ PNY LF+ Sbjct: 172 QRGLEGHSSAAVASELSLFSEILEYIEQHPAENLSVDDLARQMYLHPNYFISLFRSFTGC 231 Query: 213 GFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +Y+N ++EHA+ LL+ L V+++A G YF R+F++ SP YR+ Sbjct: 232 TPIQYVNQRKMEHARKLLEESTLPVRDIASEVGLTGP-YFSRMFKQLIGTSPRRYRQLME 290 Query: 273 SQLTEKPTTPE 283 K P+ Sbjct: 291 ETRLLKMENPD 301 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 9/267 (3%) Query: 3 HDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATL 60 + L + +++IY ++ + + + GE G L Sbjct: 40 INRDQLADLFASHSFHIQEIYRLVIQPHSTLSEFKTESAGFLLSIRGEARLNINGKSYDL 99 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 PG V++V G Q + + F + D + + A + PR Sbjct: 100 QPGSVMHVTPGCQLALQVISQSEYEY------HSLFYHLNCDKESDCDTAFKLETGANPR 153 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 I LL L++ P R+ L + L+G + + +S ++ + E YI Sbjct: 154 IIE-LLTMLHQNVHAPGGMGKLRVKELFLRILYQMLMGCKQKESSPNERIIEEAVAYIRG 212 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 +Y + LT + +A+ ++P S+ F K + +Y+ R+E A+ +LK ++ +++V Sbjct: 213 QYMNPLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMERAREILKAGNIPIRDV 272 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEY 267 + G+ + YF RLF+K PS Y Sbjct: 273 SMTVGYPNPLYFSRLFKKKFGVPPSAY 299 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 102/269 (37%), Gaps = 16/269 (5%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLY 67 P +L ++ + VP + D + +G + + + Sbjct: 14 HGTSLFPCALYEVCEEKNWSGVPH--HWHDEMEILYFSKGSYTLFVNMEQFQIEEKCFYF 71 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + G + + +T +++F LGF K + K P + + Sbjct: 72 IYPGELHAIVPHSDSTESALVFHPSLLGFEY-----KLFPQCLKPSNPAFSPFEKEY-RK 125 Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLG---SQIQTASRSQALFEAIR---DYIDER 181 + P++ +ARL + S + +L S +QT ++ E I+ D++ Sbjct: 126 VFHIFHQFPEDSLSARLFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTALDFLHSH 185 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y L +A ++ Y F+K YLN R++ A LL+ DL + EV Sbjct: 186 YQEKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVG 245 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 CGF F + F+K TE +P +YR++ Sbjct: 246 MDCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 86/259 (33%), Gaps = 14/259 (5%) Query: 29 GPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTF- 85 A+ + + L G TL ++ + + + F Sbjct: 25 ENTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFL 84 Query: 86 SVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQ----- 140 + K+QL + + L Q +++ E + Sbjct: 85 CIHVDKKQLSVYCPDL-ELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAM 143 Query: 141 ----TARLIVASLLSHCRDL-LGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 TA L++A L+ + L +S + I Y++E Y L+ E VA Sbjct: 144 RSDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQV 203 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 S Y F++ I F YLN R+ HA +L D + EV GF + F RL Sbjct: 204 GFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRL 263 Query: 256 FRKNTERSPSEYRRQYHSQ 274 F++ +P + R Y Sbjct: 264 FKEIYGMTPRQARNSYAEN 282 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 94/299 (31%), Gaps = 24/299 (8%) Query: 4 DVSYLLSRLINGPLSLR-QIYFASSNGPVPDL---AYQVDFPRLEIVLEGE--FVDTGAG 57 + +LL +G + + Y + +V G Sbjct: 46 EAVHLLEHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSER 105 Query: 58 ATLVPGDVLYVPAGGWNFPQ--WQAPATTFSVLFGKQQLGFSVVQWDGKQYQN------L 109 L GDV + G + + P+ +++FG L + Y + L Sbjct: 106 HVLADGDVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKL 165 Query: 110 AKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIV----------ASLLSHCRDLLGS 159 + +L L E+ +EQ + + Sbjct: 166 LLPGAIAHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSP 225 Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 + + R +A+ YID + L +A+ +S + F++ +Y+N Sbjct: 226 RREMDDRRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVN 285 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 R+ A LLK + + + GF D +YF ++FR +P YR+ + + Sbjct: 286 ERRVARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKKPPRR 344 >UniRef50_UPI0001C35596 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35596 Length = 279 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 97/270 (35%), Gaps = 11/270 (4%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYV 68 N L + + F + V++G E+ G + GD++ + Sbjct: 4 DFNNMIPELHYYIHRKCTPNWKIEPHVIPFIDITYVIDGKAEYNIGGRTYIVKKGDLICI 63 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 P + F Q+ + Y + PR+ S + Sbjct: 64 PQNTFRSAVNIPEDLMEC----YSTNIFLRNQFGQEAYLPVPIISHIGIIPRLISRFHEI 119 Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 E + + L+ + L S+ ++ Y+ YA LT Sbjct: 120 HEEWVQKDFGYMLKIRGILCLILYQISNLILNENHLSQEDPRIKSSIRYMSLHYAEPLTI 179 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + +A+ F++ P Y LF++ + F +YL RL +A+ +LK + V EVA CGF D Sbjct: 180 DRMAEQFHLHPVYYGSLFREAMGMTFKQYLISLRLNYAENMLKSGEYSVSEVALQCGFSD 239 Query: 249 SNYFCRLFRKNTERSPS-----EYRRQYHS 273 YF +LF++ PS E R++ Sbjct: 240 IFYFSKLFKEKKGIPPSGMFPPERRKKKKE 269 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 20/253 (7%) Query: 36 YQV-DFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + DF L IV+ G + + GDV + + + + ++++ + Sbjct: 31 HTHTDFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNTCHGYENAKDFRICNIMYRSE 90 Query: 93 QLGFSVVQWDGKQ--------YQNLAKQHVARR--------GPRIGSFLLQTLNEMQMQP 136 L + K+H + +I L L+E + Sbjct: 91 NLLLADYDIKKNAGFHALFVIEPYFTKEHSFKSNLTLKPLDFEKIHILLDSLLSEYMTKT 150 Query: 137 QEQQTARLIVASLLSHCRDLLGSQIQTASRSQAL-FEAIRDYIDERYASALTRESVAQAF 195 +T+ + LL L ++ + + YI+ Y ++ + +A+ Sbjct: 151 DGWKTSTKALFMLLVVTLARLYDFGNSSEKVDVINIAKSISYIENHYTEDISIDLLAKIS 210 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 + SP + + +F +T + Y+ R+ A +LLK L + +A CGF DSNYF R+ Sbjct: 211 HYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETTLPISTIAIQCGFSDSNYFSRI 270 Query: 256 FRKNTERSPSEYR 268 F+KN +P +YR Sbjct: 271 FKKNLYLTPKQYR 283 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 95/281 (33%), Gaps = 20/281 (7%) Query: 8 LLSRLINGPLS---LRQIYFASSNGPVPDLAYQV---DFPRLEIVLEGE--FVDTGAGAT 59 + + P + + P ++ D ++ + G G Sbjct: 4 IFHYNPDRPFRESPDLYLCYWGKERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFE 63 Query: 60 LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ--HVARR 117 L G F Q + +GF+ Q + V Sbjct: 64 LTGGQAFLAYPERVIFYQADEVDP-----WTYSWIGFNGEQVAEILSRTRLTPASPVLPM 118 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQT-ARLIVASLLSHCRDLL----GSQIQTASRSQALFE 172 + L + LNE + + + ++ ++ +L+ + A Sbjct: 119 DTHLMPQLYELLNEAEESNTTRDLRLQTLLYEFMTLLVELVPASGDADSTRTQAKDAYIH 178 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 D++ Y+ ++ +A + YLS LF++ + +YL R+E A LL+ Sbjct: 179 RCLDFLHSHYSEEMSVGQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRN 238 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + EVA + G+ D+ F ++F+K SPS+YR Q+ Sbjct: 239 GHYSIAEVARSVGYQDALLFSKMFKKTVGTSPSDYREQWQK 279 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 108/270 (40%), Gaps = 23/270 (8%) Query: 22 IYFASSNGPVPDLA---YQVDFPRLEIVLEGEF--VDTGAGATLVPGDVLYVPAGGWNFP 76 I F + P + + ++ GEF G L GD+ ++ AG + Sbjct: 19 IAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGG 78 Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG---------PRIGSFLLQ 127 ++F + L V KQ Q++ + ++L + Sbjct: 79 T-PIDCVYECIVFDMKSL-LKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFE 136 Query: 128 TL--NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEA---IRDYIDERY 182 ++ ++ + Q + ++ +L H L + + S++Q + I+++Y Sbjct: 137 SMAQKKLGYELVTQGSLYHLLGIILEH--RLYSTPKEATSKNQQRINQFKNVLSLIEQQY 194 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 LT E +++A ++P Y F+ +YLN+ R+E + L + + E+A Sbjct: 195 PDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIAL 254 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 CGF D +YF + F+K +P +Y + YH Sbjct: 255 NCGFNDISYFIKTFKKYKGVTPKQYLKDYH 284 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 106/287 (36%), Gaps = 14/287 (4%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQ-----VDFPRLEIVL--EGEFVDTGAGA 58 ++S L PLS + +Y +Q D L L EGE V G Sbjct: 20 RRVISELALHPLS-QGLYPLGMGYYRQASGHQMERQEHDDNLLIYCLDGEGEAVIDGQKT 78 Query: 59 TLVPGDVLYVPAGGWNFPQ--WQAPATTFSVLFGKQQ---LGFSVVQWDGKQYQNLAKQH 113 + GD+L +P G + Q + P T + V F + Q + Q + + Sbjct: 79 RIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAEDFAQHLQQRESNQRRYVMPIG 138 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEA 173 + R LL+ E A + +LSH L Q SR E Sbjct: 139 IHSRLASDFEALLEA-RESTYNLNAYICAANQLRQILSHIALLQPLAKQKQSRGGLDIER 197 Query: 174 IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGY 233 + + L +++A++ +S + +++ + ++E A LL Sbjct: 198 VHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTTPINHFIQLKIERACHLLDTT 257 Query: 234 DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 + + EVA A G+ D+ YF R+F+K SPS+YR+ K Sbjct: 258 NNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRKMRTGAFPYKSE 304 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%) Query: 134 MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQ 193 + + R ++A + + +T S L I DY+D Y ++ VA Sbjct: 400 TEVTDPAELRRLLAGWADAAEEYGADRRETDS--SQLIWHIVDYLDAHYFEDISLIDVAT 457 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 F++ P+YLS LF+ + F EY+ R+E A LL+ + K+ E++ G+ + YF Sbjct: 458 RFHLDPSYLSKLFKSVTSENFIEYVTRKRIEKACELLRSSERKISEISELIGYENQRYFS 517 Query: 254 RLFRKNTERSPSEYRRQYHSQLTEKPTT 281 ++F+K+T ++PSEYR S P Sbjct: 518 QVFKKSTGQTPSEYREAQQSGKAGNPKN 545 >UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNH1_LACPJ Length = 275 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 18/271 (6%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYV 68 +L + + + P +Q DF L I+LEG ++ G +V G L Sbjct: 3 QLSEFEPEVLYAFPFRNEHPGTYAYHQHDFLELSIMLEGYSDYNVEGQWRRVVAGQALLF 62 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQT 128 G + + + G + + + +++ R + + Q Sbjct: 63 NPGIHHQETQPPHTQSLQLHIGFRHIALPGQVPNHLPFKDALISLDDYRAEFMANA--QR 120 Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA--------------SRSQALFEAI 174 + +P A LI A ++ LL S + + QAL A Sbjct: 121 IVAESQRPTVFGHALLIQAMVIEQLCWLLRSLPENSVSNDYTELHQGNVSRDQQALVNAA 180 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 Y+D Y LT +VA + ++S YLS F+ YL R++ AK LL Sbjct: 181 TYYLDVHYNEDLTLGTVAASLHVSAAYLSRTFKAIQGETPISYLTRLRMQRAKQLLMQEA 240 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 + V++VAHA G+ D YF ++F++ +P+ Sbjct: 241 ITVRQVAHAVGYQDPYYFSKVFKRYFGAAPT 271 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 106/283 (37%), Gaps = 16/283 (5%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGA 58 M + +Y + + S+ + + ++ + G+ Sbjct: 1 MKNKENYYCEDMPDRNFSVDIGLSKIWELGTNFKEHWHEHLQVFYFINGKGFLRCNTKSF 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFS-------VLFGKQQLGFSVVQWDGKQYQNLAK 111 ++ GDV+ + + ++ + F LF Q + Sbjct: 61 NIIQGDVIIINSRDLHYLESLNNDLRFYLIRIDLPFLFSDQVDLCQTKYLSPLSENLILF 120 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTA-----RLIVASLLSHCRD--LLGSQIQTA 164 +++ R I + + E + + A +V L+ + D + Q+ Sbjct: 121 KNLIRNDDEIVRCIKTIIKEYNKKEIGYELAVKANLYNLVVLLIRNYIDKFVTKRQLAFK 180 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + F + +++ + ++ +++ ++SP Y +F++ EY+N RL+ Sbjct: 181 INNDERFYKVFEFVHSNFNKKISTLNLSNIAHVSPYYFCRIFKQITGKTTTEYINEVRLK 240 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 + LLK ++ + EVA CGF D NYF RLF+K SP+++ Sbjct: 241 KSIELLKNSNMNITEVAINCGFNDVNYFSRLFKKKYGVSPTKF 283 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 L+ + + + ++ C + + + RS++L E R Y+ E Y+ ++ Sbjct: 390 LDTVMALEDYEDIRTWFLEKMMQTCCSI---RDKNEDRSESLVEKARSYMQENYSREISL 446 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 + V++ +SP Y S +F++ F EYL + R+ AK LL+ +L +KE+ G+ D Sbjct: 447 DDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTD 506 Query: 249 SNYFCRLFRKNTERSPSEYRRQY 271 NYF R+F+K+T +P EYR +Y Sbjct: 507 PNYFSRIFKKHTGITPREYRERY 529 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 40 FPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFS 97 F + VLEGE F GA L G + V FG + Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDEHHPWRYVWFGFSG-RCA 98 Query: 98 VVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL 157 G ++ ++ L + ++ LS + Sbjct: 99 HDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHYRLMGMLYLALSVIANAQ 158 Query: 158 GSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEY 217 +++ S A YI Y+ + E ++ I+ +Y S LF++ + +Y Sbjct: 159 KDKLEAPS-GNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYTGMSPVKY 217 Query: 218 LNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR-----RQYH 272 L + R+ A+ +L +L V+ +A +CG+ + F ++FRK T SP+ YR R Sbjct: 218 LQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYRLGKRQRTLS 277 Query: 273 SQLTEKPTTPE 283 SQ T P+ Sbjct: 278 SQETMNNNRPD 288 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 90/270 (33%), Gaps = 19/270 (7%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 I + P + +F + I+ G+ + LV GD + + Sbjct: 21 IVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDRPHDYLNM 80 Query: 80 APATTFSVLFGKQQLGFSVVQWDGKQYQNLAK----------------QHVARRGPRIGS 123 + ++LF +L S+ + Q Sbjct: 81 DQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNPAELIETLR 140 Query: 124 FLLQTLNEMQMQPQEQQTARLI-VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERY 182 ++ E++ + +T + + L++ S+ +I + Sbjct: 141 YVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEAISHIQRHF 200 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 ++ + + + +S F+ T +YL R++ A LL+ D + ++A Sbjct: 201 DRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTDRSITDIAF 260 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 GF DSNYF R FR + SP EYR+Q Sbjct: 261 DVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 19/257 (7%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + +F + + +G+ + GD++ + G + + Sbjct: 38 LHWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFS 97 Query: 93 QLGFSVVQWDGKQYQNLAK--------QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARL 144 F D + + + + + L LN + E Sbjct: 98 VDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYH 157 Query: 145 I---------VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 + L ++ + + SR + I YIDE Y A++ +A Sbjct: 158 LALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYC 217 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 S ++ F+ T + F YLN RL A LL D V VA CGF + +YF R+ Sbjct: 218 GFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRM 277 Query: 256 FRKNTERSPSEYRRQYH 272 F+K +PS YR ++ Sbjct: 278 FKKKYGVTPSRYRETHN 294 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 18/275 (6%) Query: 4 DVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPR---LEIVLEGE--FVDTGAGA 58 D+ YL+ + + F P + P + + L G F G Sbjct: 2 DIKYLIDYFAQASVKFTDV-FTKRMEPGEVDLGRTTAPEKCGIIVPLAGSAIFSLNGTPY 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG 118 + PG +++ + ++ + +++ + Y L +QH + Sbjct: 61 VMEPGVIVHAGPQMPIEVNVTS-----QKVWEYAVVHYNLPMEETALYP-LVEQHFLIKT 114 Query: 119 PRIGSFL--LQTLNEMQMQPQEQQTARL--IVASLLSHCRDLLGSQIQTASRSQALFEAI 174 + +Q L E P + + +LL H L+ ++++ + L E Sbjct: 115 GHNTQIITQVQQLVESYSFPGNMAVFKSKTLFMNLLEHI--LIAAKVKVLDNANELMEQA 172 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 YI E YA ++ +++ F I ++LF++ + ++Y+ R+ AK LL+ Sbjct: 173 LQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYGG 232 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + V E+A G+VD YF R+F+K T SPS YR+ Sbjct: 233 IPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 97/273 (35%), Gaps = 19/273 (6%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWN 74 + +Y + + + D L V +G F GD+ +P + Sbjct: 14 FPMEMVYRTKKSPQLELPHHLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIH 73 Query: 75 --FPQWQAPATTFSVLFGKQQL----GFSVVQWDGKQYQNLAKQHVARRG--PRIGSFLL 126 FP P + ++ F + G + ++ K R +++ Sbjct: 74 SSFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIE 133 Query: 127 QTLNEMQMQPQEQQT-ARLIVASLLSHCRDLLGSQIQTASRSQALFEAI--------RDY 177 L + + + Q R + L + I T S Q I + Sbjct: 134 DMLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQW 193 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I E + +++ + P + S +F+K + Y++ R+ AK LL+ ++ V Sbjct: 194 IHEHLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASV 253 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 ++A CG+ +F R F+K T +P YRRQ Sbjct: 254 GQIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 7/261 (2%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYV 68 + + + + + + V+EG E L G+V Sbjct: 4 FFEANKSGDQNFFSSKILENFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSIC 63 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQL-GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + +F F ++ D +++ G S LL Sbjct: 64 FPNDIHTFNSDGFSKIILFIFSPDLTRSFFGIRMDKTLENPFMSKNIVDDGI---SSLLY 120 Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALT 187 L++ + + ++ ++L + ++++ + + + YI+ Y ++ Sbjct: 121 MLHDEYKSVNNKYVIKGLLYTILGKLDSHFTFK-KSSTFYNSTMQNLLKYIEIHYHEKIS 179 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 +S+A+ S YLS +F FN+Y+N R+ A+ LL DL V +A CGF Sbjct: 180 LDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFE 239 Query: 248 DSNYFCRLFRKNTERSPSEYR 268 F R+F++ T +P+++R Sbjct: 240 SQRNFNRIFKELTALTPTKFR 260 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 5/234 (2%) Query: 43 LEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFP--QWQAPATTFSVLFGKQQLGFSV 98 L EGE + T+ D + AG + P + + + F +Q Sbjct: 60 LIYCHEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSHLFS 119 Query: 99 VQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG 158 ++ Y + + ++ + +L L EM + + L + LL R + Sbjct: 120 ELFNRTIYIDDSPTARFNDRIQLFNEILVNL-EMGYSIENLEYITLCLWYLLGSFRYIPQ 178 Query: 159 SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL 218 + ++Q + + +Y+ LT E +A++ SP YLS LF + + Y Sbjct: 179 FREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYF 238 Query: 219 NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 N +++ A LL D K KE+A F D YF ++F K SP EYR + Sbjct: 239 NQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKK 292 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 104/264 (39%), Gaps = 7/264 (2%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLY 67 + N + + P+ + DF L IV +G + + L + Y Sbjct: 7 NDFFNNSDATVCTEVRAPQEDFPE--HSHDFHELMIVTKGAGQHILNDVPINLAQNYICY 64 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGP---RIGSF 124 + + + ++LF K +L +S + ++ A+Q ++ + Sbjct: 65 ISPKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPKESDAQQSWYISTETMKKVCTL 124 Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS 184 + Q +E + E + + L Q+ + S I D+I YA Sbjct: 125 MAQIEHESSLHSVESRLMTEALFQQLVVEISRGRLTSQSNNASDNSILKIIDWIQNNYAE 184 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ F IS LS ++ + FN Y++ R+ HA LL DL V ++A Sbjct: 185 EFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIAFQV 244 Query: 245 GFVDSNYFCRLFRKNTERSPSEYR 268 G+ DSNYF F++ T ++P+E+R Sbjct: 245 GYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 111/288 (38%), Gaps = 10/288 (3%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDL---AYQVDFPRLEIVLEGE--FVDTG 55 MY + + S S + F+ + P D+ + V+ G+ F+ G Sbjct: 1 MYRETYTVASNSDPDSASYITVLFSGESQTRPGHQIGPRLCDYYLMHHVISGKGIFMYRG 60 Query: 56 AGATLVPGDVLYVPAGGW--NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH 113 L GD + P V F + + ++ + + + Sbjct: 61 KELELKAGDTFLIEPEELVRYEADQVNPWMYRWVAFQGKGVPEALEKTGFSSSRCIVHTR 120 Query: 114 VARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVA--SLLSHCRDLLGSQIQTASRSQALF 171 + + S +L L + + ++ L V L G ++T+S S Sbjct: 121 DNQNVSELFSTILSVLQDKKEGAHQKALGYLYVLFGELCEAIYPKTGIGMRTSSESGRTV 180 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + Y+ +YA ++ E++A + YLS +F++ + +L R++ A+ LL+ Sbjct: 181 QKAIHYLSTQYAEDISIETMADNLGYNRAYLSRIFKQETGLTPVTFLLKLRIDKARFLLR 240 Query: 232 GY-DLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 +L ++++A + GF D YF + F++ + +P+EYR E Sbjct: 241 QRMELTIEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRDSIKHIRKEN 288 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 4/239 (1%) Query: 43 LEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ 100 L IVLEG+ FV L G + F Q A G G Sbjct: 38 LHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADAKNPWKYFWIGFDGEGAEK-Y 96 Query: 101 WDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ 160 + + S L + L + E+ + + S + + Sbjct: 97 LRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKLQGLFYEFFSLIVEENSIE 156 Query: 161 IQTASRS-QALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 + + I YI Y + ++ + ++ +YLS LF+K I EYL Sbjct: 157 EKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSYLSTLFKKNMGITIQEYLT 216 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 RL A LL + ++ VA++CG+ D F + ++K +P+++R++ + E Sbjct: 217 VFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYGVTPTQHRKKDRKEAKEN 275 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 16/268 (5%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGW 73 P I + + +LEG T V DV++V +G Sbjct: 18 PFEFHHIDHTH--PRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGIL 75 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDG-----KQYQNLAKQHVARRGPRIGSFLLQT 128 + ++F + + + H + P+I + + Sbjct: 76 HSGIPH-DCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVL 134 Query: 129 LNEMQMQPQEQQTA----RLIVASLLSHCRDLLGSQIQTASRSQALFE--AIRDYIDERY 182 + M + + L+ + + +T + + + + ++I++ Y Sbjct: 135 FDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKNY 194 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 A+ +T + ++ + +SP Y F + +YLN R+E A L D + E+A+ Sbjct: 195 ANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAY 254 Query: 243 ACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 GF D +YF R F+K +P +Y+R+ Sbjct: 255 RNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSM7_9BACI Length = 550 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 97/267 (36%), Gaps = 8/267 (2%) Query: 17 LSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN 74 L LR + F NG L +V G+ L P V G Sbjct: 22 LRLRDMQFIKGNGNWRMEQQLTVSHVLIVVKSGQGRLTLDHDEYQLRPDTVYVCAPGETY 81 Query: 75 FPQWQAPATTFSVLFGKQQL-----GFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + + LF G+ VQ K+ K + L + Sbjct: 82 GIEAEKASQLKLFLFKFDVFQVTEQGYERVQGIKKERLFPLKGEIQISPAGQLVSLCDAI 141 Query: 130 NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRE 189 + + + ++ ++ A S+ E ++Y++ + LT E Sbjct: 142 YDHWRSEDGLERFYSQF-AFQELLYYIMKNRRLQAKESRTSLELAKEYMERYFNENLTIE 200 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 +A+ ISP Y LF+KT I +YL R+ AK L+ D K++++AH G+ D Sbjct: 201 QLARIANISPKYFVDLFKKTYGISAIDYLTELRINKAKQLMAQSDAKLRDIAHQVGYNDE 260 Query: 250 NYFCRLFRKNTERSPSEYRRQYHSQLT 276 YF R F+K +P+ Y + ++ Sbjct: 261 FYFSRKFKKKVGVTPTVYMKSRRRKIA 287 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 24/260 (9%) Query: 34 LAYQVDFPRLEIVLEGEFVD---TGAGATLVPGDVLYVPAGGWNFPQWQ-APATTFSVLF 89 L + + L V G V+ L GD+L + + P F+++ Sbjct: 70 LMHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVL 129 Query: 90 GKQQLGFSVVQW--DGKQYQNLAKQHVARRGP-------------RIGSFLLQTLNEMQM 134 + S++ D + N ++ R RI + + E+ Sbjct: 130 KPKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYS 189 Query: 135 QPQ-EQQTARLIVASLLSHCRDLLGSQIQTA---SRSQALFEAIRDYIDERYASALTRES 190 + ++ A + L + + Q+ I Y+DE ++ A T +S Sbjct: 190 KEMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVKNKQVTDIITYMDENFSQA-TLQS 248 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 VA F S +YLS + +K F+E ++ +LE+A T L+ D+ ++E+A GF D++ Sbjct: 249 VADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDAS 308 Query: 251 YFCRLFRKNTERSPSEYRRQ 270 YF ++F++ +SP+EYR+Q Sbjct: 309 YFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 21/257 (8%) Query: 34 LAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFP-QWQAPATTFSVLFG 90 + +F L V G G L G + + +T ++L Sbjct: 107 HLHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLR 166 Query: 91 KQQLGFSVVQW--DGKQYQNLAKQHVARR-------------GPRIGSFLLQTLNEMQMQ 135 K +++ D + + + + G I ++ + + E Q Sbjct: 167 KSTFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQ 226 Query: 136 PQE-QQTARLIVASLLSHCRDLLGSQIQTASRSQAL-FEAIRDYIDERYASALTRESVAQ 193 Q +L++++LL+ + +T ++ ++ I YI + Y +T +S A+ Sbjct: 227 SNYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYT-DVTLKSTAE 285 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 F+ SP+Y+S K F EY+ +L A+ LL L +++VA G+ + F Sbjct: 286 HFHYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFD 345 Query: 254 RLFRKNTERSPSEYRRQ 270 R F+K+ +PS YR Q Sbjct: 346 REFKKHYSLTPSRYRSQ 362 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 94/271 (34%), Gaps = 12/271 (4%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDVL 66 +S + P+ + + P L + F + + G F++ L PG Sbjct: 12 ISSVDLYPIQFGKEKCDPWHHYGPTLTHNYLFHYI-LSGRGSFLENERHEAIQLGPGQGF 70 Query: 67 YVPAGGW--NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSF 124 +P P T + F G + + N P I S Sbjct: 71 LMPPNTVCSYTADQDDPWTYCWIEFN----GLKAANFMRQAGLNANNLIFTPHKPMIISS 126 Query: 125 LLQTLN-EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR--SQALFEAIRDYIDER 181 + TL ++ Q + + L+ H Q YI + Sbjct: 127 IKDTLETIIRNHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIREAIHYIQDH 186 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y + + +A +++ NY + LF++ + ++++ R+ + LL + ++++A Sbjct: 187 YMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLASTNRSIRDIA 246 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 G+ + F F++ +P E+RR+Y Sbjct: 247 DQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 102/293 (34%), Gaps = 24/293 (8%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLE--GEFVDTGAGA 58 M ++ L + P+ R + P + + V + G Sbjct: 17 MRQIINEQLQISESNPIKARYYDYDRFTYPW----HFHSQYEIIYVKKSCGRCFVGDCIE 72 Query: 59 TLVPGDVLYVPAGGWNFPQWQ----APATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHV 114 GDV+ ++ + V Q + +Q+ Y + V Sbjct: 73 CFSEGDVVLFGPSLPHYMRSDDAYHGDNPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRV 132 Query: 115 ARRGPRIG-----------SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ--- 160 + R G ++ E++ Q L+ A +S R +L S Sbjct: 133 LLKEARRGVVFHTADAGAVRDMVSAFPELKGFGQITGLLDLLQALAVSVPRRMLASPCYY 192 Query: 161 IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNH 220 + + + I +I+ Y +L + +A+ ++ + F+ F +Y+ Sbjct: 193 EKFPTAGNKRIDKIISFINSNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVAD 252 Query: 221 TRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 R+ +A LL D+++ ++A CGF +F R F++ T +P++YR Q Sbjct: 253 MRIGYACKLLTIGDMEISQIAVECGFDSIPHFNRTFKQLTGLTPTQYRNQIMK 305 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 96/254 (37%), Gaps = 16/254 (6%) Query: 36 YQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQWQAPATTFS------- 86 + + ++ + G + D++ V ++ + + F Sbjct: 34 HWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIRFEPS 93 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA---- 142 LF + ++ + + + + L E + + A Sbjct: 94 FLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYELAIKGY 153 Query: 143 -RLIVASLLSHCRDLLGSQIQTASRSQALF--EAIRDYIDERYASALTRESVAQAFYISP 199 +V +LL + + +Q + + L + + I+++Y +T +A +S Sbjct: 154 IYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANTVGLSV 213 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 ++ F++ +Y+N+ RL+ + LK D + E+A CGF + NYF R+F+K Sbjct: 214 HHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSRIFKKY 273 Query: 260 TERSPSEYRRQYHS 273 SPS+YR Y + Sbjct: 274 HSTSPSQYRNLYKN 287 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 104/253 (41%), Gaps = 12/253 (4%) Query: 35 AYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 ++ + L + EG + G+++ P + + A + F + Sbjct: 29 SHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMH----HSYAPSEDQAFQRI 84 Query: 93 QLGFSVVQWDGKQYQNLAKQ--HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI-VASL 149 + F+ + + R+ + L M M+ E I + ++ Sbjct: 85 VVYFTEKAIGDLTLIEKMRHAGGLYHPDRRMSHQIHGLLGMMLMEQSETDDLHDITMETI 144 Query: 150 LSHCRDLLGSQIQTASR--SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ 207 L LL ++T + +++ + +YI + Y L + +A FY+S YL F+ Sbjct: 145 LRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLDELAGRFYVSQYYLCREFK 204 Query: 208 KTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEY 267 K + N+Y+N TR+ +A+ + + +VA CGF S +F R+FR T +P+ + Sbjct: 205 KYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRVFRSVTGMTPTAF 264 Query: 268 RRQY-HSQLTEKP 279 R+ Q+TE+ Sbjct: 265 RKSCSQRQVTERK 277 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 103/270 (38%), Gaps = 17/270 (6%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGW 73 P L S + +P + ++ + +V +G F L GD++ VP Sbjct: 15 PFQLVHNKTKSCDDELPH--HLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSI 72 Query: 74 NFPQWQA--PATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGS-----FLL 126 + TT ++ F L + + ++ FL Sbjct: 73 HCSLLDKGKTVTTSALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLA 132 Query: 127 QTLNEMQMQ------PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE 180 +E+ + + A LI +++ R+ +Q + + A + YID Sbjct: 133 GLFDEIAKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDA 192 Query: 181 RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV 240 L + +A + P+Y S F+ + + + E+L RL AK LLK DL ++ + Sbjct: 193 HLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAI 252 Query: 241 AHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 A ACG+ +F R FR T +P+ YR+ Sbjct: 253 AEACGYHSMPHFYRTFRAATGTTPAAYRKN 282 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 2/178 (1%) Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT 163 + +Q + + +G + L +L+ + + ++ + H + + Sbjct: 363 QDFQQMVHYVLQIKGIQAHQLLSDSLSVERFARAGRSAKDALI--WIRHIVGKSLDYMNS 420 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 S ++ E + YI + A ++RE +A Y++P+YL+ +F++ + ++YL RL Sbjct: 421 LEHSPSVVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSISDYLLQQRL 480 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 A LL DL V VA G+ + ++F R+F+K +P EYR+ S+ ++ + Sbjct: 481 RIAAELLANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQSQESRQSDSVKS 538 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPG 63 + +++ + + + Y DF + VLEG EF G L G Sbjct: 11 NPVITYNEHMNVLFAGESQTKPSHQRGPKVY--DFYLMHTVLEGKGEFTCGGKSYPLQAG 68 Query: 64 DVLYVPAGGWNFPQW--QAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRI 121 D + P V F Q +A+ RR + Sbjct: 69 DTFLIEPEALVSYISNADEPWLYRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVL 128 Query: 122 GSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTA-----SRSQALFEAIRD 176 + + + P A + LL+ + A + L + + Sbjct: 129 YNHIFSIFRK--NDPAAHLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIH 186 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD-L 235 Y+ +YA ++ E +A++F + YLS +F++ +L R++ A+ +++ + L Sbjct: 187 YLSTQYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGL 246 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 ++++A + G DS YF + FR+ SPS YR Sbjct: 247 TIEQIAASVGLQDSLYFSKQFRRFYGLSPSAYRESMRQ 284 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 3/139 (2%) Query: 131 EMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRES 190 E I+ L++ + ++ Q R+ +L + YI+ ++ LT E Sbjct: 402 EFLTLDNLADMRERILERLMALVAQVAETREQ---RNSSLIDRASKYIEANFSQDLTLEE 458 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 VA+ Y+SP Y S LF++ + F +YL RL+ A+ LL L V E+A G+ D+ Sbjct: 459 VARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKLPVAEIATRVGYRDAR 518 Query: 251 YFCRLFRKNTERSPSEYRR 269 YF ++F+K +PS +R+ Sbjct: 519 YFGQVFKKQEGYTPSVFRK 537 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 20/271 (7%) Query: 33 DLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFG 90 + + + + EGE F + G ++ V + TT Sbjct: 27 RSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTRII 86 Query: 91 KQQLGFSVVQWDGKQYQ------NLAKQHVARRGPRIGSFLLQTLNEMQMQ--PQEQQTA 142 F + Q+D K V + L ++ + + + Sbjct: 87 LYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRSYK 146 Query: 143 RLIVASLLSHCRDLLGSQIQ----------TASRSQALFEAIRDYIDERYASALTRESVA 192 LI ++ + D + + S I DYI + YA +++ + +A Sbjct: 147 ALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDGLA 206 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 FY+S YLS F++ G NEY+N R + AK LL+ L V E+A G+ YF Sbjct: 207 GVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESITYF 266 Query: 253 CRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 ++F+ SP +YR+ + + TPE Sbjct: 267 EKVFKTYMSISPLKYRKTLNGITYKNKITPE 297 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 103/275 (37%), Gaps = 18/275 (6%) Query: 15 GPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF---VDTGAGATLVPGDVLYVPAG 71 L ++ I+ S + + + + + VL G+ G T GD++ + + Sbjct: 12 DNLPIKIIFHTSDDAQL-VPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSN 70 Query: 72 GWNFPQ--WQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + + L + D + ++ +I + L + L Sbjct: 71 AIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENL 130 Query: 130 NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQT------------ASRSQALFEAIRDY 177 + + + L ++ +L+ ++ + I +Y Sbjct: 131 DSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNY 190 Query: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237 I E Y+ L+ + ++ F +SP YLS F+K + + Y+N RLE + L D + Sbjct: 191 IKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSI 250 Query: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 E+A GF + F ++F+ +P++YR++ Sbjct: 251 TEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIK 285 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 92/269 (34%), Gaps = 19/269 (7%) Query: 27 SNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNF--PQWQAPA 82 N + + + ++ G + ++ GD+L + + Sbjct: 2 PNSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSM 61 Query: 83 TTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGP----------RIGSFLLQTLNEM 132 + S++F LG+ V ++ N + R P + + L Sbjct: 62 VSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECF 121 Query: 133 QMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRS-----QALFEAIRDYIDERYASALT 187 + + + L G + + + + YI Y LT Sbjct: 122 NGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLT 181 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 E ++ + S + + F++ + EY+NH R+ A L + +V ++A GF Sbjct: 182 IEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFR 241 Query: 248 DSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 + +YF ++F++ +P YR+ L+ Sbjct: 242 NISYFNKVFKERFGVTPGSYRKNSRENLS 270 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 94/264 (35%), Gaps = 17/264 (6%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWN----- 74 +Y + + +F + V EG G + G + ++P G + Sbjct: 22 LYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPK 81 Query: 75 FPQWQAPATTFSVLFGKQQL-----GFSVVQWDGKQYQN--LAKQHVARRGPRIGSFLLQ 127 P+ P ++ L L GF + + L+ V + + Sbjct: 82 TPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRE 141 Query: 128 TLNEMQMQP-QEQQTARLIVASLLSHCRDLLGSQIQTASRSQA--LFEAIRDYIDERYAS 184 E +P +V +L+ I A + +ID YAS Sbjct: 142 LYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYAS 201 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 L +A +S S LF++ + EY+ R++ A LL V+++A A Sbjct: 202 ELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAV 261 Query: 245 GFVDSNYFCRLFRKNTERSPSEYR 268 G+ D +F RLF+K T +P +YR Sbjct: 262 GYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 107/268 (39%), Gaps = 18/268 (6%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 +P + D + +LEGE + + G +++V G + + Sbjct: 21 DYEYNMPT-KHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSY 79 Query: 84 TFSVLFGKQQLGF--SVVQWDGKQYQNLAKQHV------ARRGPRIGSFLLQTLNEMQMQ 135 +L ++ F + ++ +H + RI L E+Q + Sbjct: 80 HDRILIELKEEPFASFFSFFGDLSLKDFFSKHYGVLELEEKDQRRIERLLTSISTEIQNK 139 Query: 136 PQEQQTARLIVASLLSHCRDLLGSQIQT-------ASRSQALFEAIRDYIDERYASALTR 188 + + ++ + L + T + + + YI + ++ Sbjct: 140 SIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPISL 199 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +++++ F++S YLS +F++ NEY+N R++ A+ LL + + E++ GF Sbjct: 200 DALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGFES 259 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHSQLT 276 YF R+F+K TE SP +YR+Q ++ Sbjct: 260 ITYFERVFKKYTESSPLKYRKQNRKEIQ 287 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 18/269 (6%) Query: 21 QIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQW 78 +++F P + + + ++EG L GD+L + G + Sbjct: 17 RLFFNDGYSNTPH--HWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFK 74 Query: 79 QAPATTFSVLFGKQQL--GFSVVQWDGKQYQNLAKQHV-ARRGPRIGSFLLQTLNEMQMQ 135 + + +V+ + + F D K + + Q + G I + + + +NE+ + Sbjct: 75 EKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINE 134 Query: 136 PQE-QQTARLIVASLLSHCRDLLGSQIQTASRSQ----------ALFEAIRDYIDERYAS 184 + ++ +LI+ + L +L + S S +++ Y+D Y Sbjct: 135 YSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQE 194 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 + + ++++ S Y + F++ + F +YLN+ R++ A+ + D + E+A+ C Sbjct: 195 RIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNC 254 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 GF F RLF+ +P +YRR + Sbjct: 255 GFNSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 26/282 (9%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVL 66 + + ++ + + + V+ GE G + Sbjct: 19 IEEHFHNQFP---VFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLY 75 Query: 67 YVPAGGWNFPQWQAPAT---TFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGS 123 +P G + + A +++ +G + W + ++ HV P Sbjct: 76 IIPIGTSHIFRPNGTANRLLVYNLCIRPDWIG-ELGVWLSQYCRDTDVLHVLDGNPGTYL 134 Query: 124 FLLQT-------LNEMQMQPQEQQTARLI-----VASLLSHCRDLLGSQIQTASR----- 166 FL T ++ + E+ + LL+ L +Q T + Sbjct: 135 FLRDTPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGDQTTGST 194 Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 + F +I ++I+ A L E +A IS + LF++ +GF+EY+ + R+E A Sbjct: 195 RHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELA 254 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 LL G V ++A G+ D +F +FRK +PS+YR Sbjct: 255 CQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 6/242 (2%) Query: 36 YQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQW-QAPATTFSVLFGKQ 92 + D + IVLEG+ V GA + P DV + G + + T F++ + Sbjct: 35 HVHDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHTYFTICVEPE 94 Query: 93 QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSH 152 L Q K + +A + + S + + + +Q + +++ L + Sbjct: 95 ALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISILSTA 154 Query: 153 CRDLLGSQIQ--TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTG 210 + + S R+YI YA LT + +A +SP Y LF + Sbjct: 155 ILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLFLENV 214 Query: 211 AIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 I +++L R++ A+ +L + + A GF D ++F R F++ T SP Y R Sbjct: 215 GISPHDFLIQYRIKKAREMLDQGS-SLADAALDVGFTDQSHFTRAFKRVTGISPGRYIRN 273 Query: 271 YH 272 Sbjct: 274 LQ 275 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 6/201 (2%) Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 AG N + ++ + +++ + + ++ L Sbjct: 335 AGAMNCAEGFFEWMHSQQTVTREDIEIKILEMVMNAERRAFFAGTLKYNVNSRRSYIREL 394 Query: 130 NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRE 189 ++ + + + + ++ + ++YI+E + ++ + Sbjct: 395 QSCTDIENLKKWFLDKTREICTKL------ENSKEKEAGSIIDRAKEYINENFRRDISLD 448 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 V++ ISP Y S LF++ F EYL RL++A+ LL+ L +KE+ G+ D Sbjct: 449 DVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDP 508 Query: 250 NYFCRLFRKNTERSPSEYRRQ 270 NYF R+F+K +PSE+R + Sbjct: 509 NYFSRIFKKYEGVTPSEFRER 529 >UniRef50_UPI0001C36187 helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36187 Length = 301 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 17/290 (5%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGA 58 M ++ S +IY+ + + D+ LEG Sbjct: 1 MKKNLQTKFSTRQYMLSEDFEIYYYKEHYLSKVELHTHDYYEFYFFLEGNISMKIEEKQY 60 Query: 59 TLVPGDVLYVPAGGWNFPQ-WQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARR 117 L GD++ +P + +F + + + + Y L + R+ Sbjct: 61 PLQYGDLVLIPPEIRHRAVVHDEETPYRRFVFWISREYCNQLVELCRDYGYLMQYVTVRK 120 Query: 118 ----------GPRIGSFLLQTLNEMQMQPQEQQTARLI-VASLLSHCRDLLGSQ--IQTA 164 I S + + E+ Q + + V L+ H ++ Q ++ Sbjct: 121 EYIFHNDVIAFNTIQSKVFHLIEEIHSQRFGKTAKIPLCVNDLILHLNRVVYEQNHPKSP 180 Query: 165 SRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 + L+E + DYI+E LT E +A+ FY++ ++SH F+ + ++Y+ R+ Sbjct: 181 KEERDLYEKLIDYIEEHLDEELTLERLAREFYVNKYHISHAFKDNMGLSVHQYITKKRVA 240 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 + L +K+ EV GF D + F R F+K SP EYR S+ Sbjct: 241 ACREALLN-HVKISEVYPMFGFQDYSGFYRAFKKEYGISPQEYRETKKSK 289 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 11/278 (3%) Query: 2 YHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGAT 59 + SY++ LS+ + F S + D + ++ G+ + G+ T Sbjct: 4 KYKNSYIVKEKELVSLSVYNVGFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTVNGSVHT 63 Query: 60 LVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDG-KQYQNLAKQHVARRG 118 L PGD V Q A +GF+ + + K H Sbjct: 64 LTPGDAFLVYPNTEVIYQADAQDPWEY-----TWVGFTGSDAATILRATDFTKAHPYIHS 118 Query: 119 PRIGSFL-LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRS--QALFEAIR 175 G+ + Q ++ + E + A + L + + + ++ + + Sbjct: 119 VSNGNEIKRQLMHIYDARGTEFENALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGI 178 Query: 176 DYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDL 235 +YI Y+ +T E +A +S ++L FQ + EYL R++ A LLK L Sbjct: 179 EYISANYSYPITVEDIASYIGLSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSL 238 Query: 236 KVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + +A + GF +S YF + F K SP EYR +Y Sbjct: 239 SITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYRSKYKK 276 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 99/271 (36%), Gaps = 22/271 (8%) Query: 33 DLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQW---QAPATTFSV 87 + + ++L G + G+++ V +G + V Sbjct: 38 RYNHFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSIVGDPETEYERV 97 Query: 88 LFGKQQLGFSVVQ--WDGKQYQNLAKQHV------ARRGPRIGSFLLQTLNEMQMQPQEQ 139 + + V + + +H ++ LQ + E+ Sbjct: 98 ILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQIMEELDKAEPMS 157 Query: 140 QTARLIVASLLSHCRDLLGSQI---------QTASRSQALFEAIRDYIDERYASALTRES 190 QTA L L Q+ + + I DYI + + L+ +S Sbjct: 158 QTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYISDHFQERLSLDS 217 Query: 191 VAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN 250 +A+ FYIS YLS F + G NEY+N R++ A++LL+ L V E+A GF Sbjct: 218 LAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSEIASRTGFESIT 277 Query: 251 YFCRLFRKNTERSPSEYRRQYHSQLTEKPTT 281 Y R+F+K +P++YR+ S + T Sbjct: 278 YLGRVFKKYQHVTPAQYRKSLTSTAEKNNTN 308 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 16/266 (6%) Query: 20 RQIYFASSNGPVPDLA-YQVDFPRLEIVLEGEFVDTG--AGATLVPGDVLYVPAGGWNFP 76 + +A + ++ + L ++EGE + + G++L +P + Sbjct: 4 VEFSYAGFHASTRSTPLHRHNGTELVYIVEGECENRIPFRDRKIAAGELLIIPPELEHRQ 63 Query: 77 QWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 TF V+F + ++N + R + S++ Q + Q Q Sbjct: 64 IDLGFVRTFYVVF----------EAKPGVFRNDLRSIDVRSDRFVRSWMEQLVLLYQEQA 113 Query: 137 QEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFY 196 +Q L L I + A A +I + L +A + Sbjct: 114 LDQCRLLLPAL---LARITRLEGSIDGTAEIPAGLAAAIRFITYHFHRELAIREIAASNG 170 Query: 197 ISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLF 256 +SP+Y + LF K + EY+ R+ HA+ LL+ L + E+ CG+ ++ YFCR+F Sbjct: 171 MSPSYFNALFHKHMQVSPAEYIKKLRMGHARQLLRNSRLTISEIGEQCGYRNAYYFCRIF 230 Query: 257 RKNTERSPSEYRRQYHSQLTEKPTTP 282 RK +P EYR + K P Sbjct: 231 RKVHGCTPGEYRALPRREYDVKFLAP 256 >UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVZ4_PAESJ Length = 288 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 10/276 (3%) Query: 3 HDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQV-----DFPRLEIVLEGEFVDT--G 55 H+ + + N L ++ + + Y V + VL G + G Sbjct: 6 HEFADIFYYTPNEFEKLGGLWPLRTGRNIAKANYSVGPRVIECFSFHFVLNGSVTLSSMG 65 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGK-QYQNLAKQHV 114 L G + + + + + L F+ Q + + L + Sbjct: 66 ETVILPKGSMFCLFPDVKHSYWITQYDS--ASPLKMHWLAFTGSQAEMLVRRIGLTEHKP 123 Query: 115 ARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI 174 R Q M+ Q+ L + +L ++L + AS + +A Sbjct: 124 YLRSRLTTELANQLQACMERMKNWQKDGDLQLQMMLYQLFEMLSRPLPEASEEKDWLKAC 183 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 Y+ YA ++ +A+ + ++LS F+++ I EYL R+E A +L+ Sbjct: 184 LQYMQTHYAEGISVTDLAEWSGMHRSHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRT 243 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQ 270 L + +++ + G+ D F R F T SPS YR + Sbjct: 244 LSITDISLSLGYTDLYTFSRAFSTYTGMSPSNYRSK 279 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 15/274 (5%) Query: 16 PLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGW 73 Y S + + + + +L G F T+ GD+L++ +G Sbjct: 16 KFPFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAI 75 Query: 74 NFPQWQAPATTFSVLFGKQQL--GFSVVQWDGKQYQNLAKQHVARRGPR---IGSFLLQT 128 + T ++F L S+V + + K+ + + L Q Sbjct: 76 HSGIPV-DCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQM 134 Query: 129 LNEMQMQPQEQQTARL----IVASLLSHCRDLLGSQIQTA--SRSQALFEAIRDYIDERY 182 M+ + Q L+ + + +A +S + + + +I+ +Y Sbjct: 135 FEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKVLFFIETKY 194 Query: 183 ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAH 242 ++ E +A+ ++ Y F++ EYLNH R+E A +K +D + +VA+ Sbjct: 195 MENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAY 254 Query: 243 ACGFVDSNYFCRLFRKNT-ERSPSEYRRQYHSQL 275 CGF D++YF ++F+K +P EY + Y + Sbjct: 255 DCGFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=Anaerococcus RepID=C2BII1_9FIRM Length = 282 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 111/283 (39%), Gaps = 13/283 (4%) Query: 1 MYHDVSYLLS---RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTG 55 M + ++ L N + + ++ + F + EG Sbjct: 1 MEKNNEQIIEEENSLNNLEIKILDAQKNINDSKISSRIQFHPFTYFYYLDEGFGRLTIEN 60 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAP-ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHV 114 + GD++ + + + + + FG + + + + D + N Sbjct: 61 DNIEVNAGDLIIINSNVGHTLHLDKSISNVKYLGFGIESVSIAGLDDDESKSINYFHIDN 120 Query: 115 ARRGPRIGSFLLQTLNEMQM-----QPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA 169 + R + E + + TA +V +LL R + I+ + Sbjct: 121 RNKALRFEDYFEDIHREYKSNDIFARSLANATATTLVINLLRKYRKDIT--IKRDKKVNR 178 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + I+ YID Y+ + E ++ Y++ +L F+++ I EYL R+E AK+L Sbjct: 179 QIDYIKSYIDSNYSEDIKLEDLSAMAYMNKFHLISEFKQSYRITPIEYLILKRIEIAKSL 238 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 L + ++E++ GF +YF ++F+K ++PS++RR++ Sbjct: 239 LISTNHSMEEISAMVGFNSQSYFNQVFKKKAGQTPSQFRRKHR 281 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 8/244 (3%) Query: 34 LAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGK 91 ++ D L + G ++ GDV + + + + T +++LF + Sbjct: 28 GLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTHCYEMASSCTFYNILFRR 87 Query: 92 QQLGFS------VVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI 145 + L + W+ + + L + F + + P + R + Sbjct: 88 ELLQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEIIVELKKRLPGYEAAVRAL 147 Query: 146 VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 A L + + + +YI+ S ++ +A +S + Sbjct: 148 FAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTISLRELAGVAGMSTPAFAGA 207 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F++ ++ R+ A+ LL+ L + E+A GF D+ +F R+FRK T SP Sbjct: 208 FRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFYDTCHFSRVFRKKTGLSPR 267 Query: 266 EYRR 269 EYR+ Sbjct: 268 EYRQ 271 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 106/278 (38%), Gaps = 19/278 (6%) Query: 22 IYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQ 79 I + + + + ++ +EG F+ + PG ++ + + Sbjct: 18 IDRSRRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSG 77 Query: 80 APATTFSVLFGKQQLGFSVVQWD---GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQP 136 VL + F + + L + + P S++ L ++ + Sbjct: 78 KYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEV 137 Query: 137 QEQQTARL-----------IVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 ++ I + + R L ++ + L I +I YAS Sbjct: 138 IHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYASI 197 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 + E +A +FY+ +YL +F++ EY N R+ ++ LL+ D + E+A G Sbjct: 198 HSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKSG 257 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ---YHSQLTEKPT 280 + + Y+ R+F+K TE SP +YR++ Y L EK Sbjct: 258 YSNITYYNRVFKKYTETSPLQYRKKQIAYKESLREKNN 295 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 96/304 (31%), Gaps = 35/304 (11%) Query: 1 MYH-DVSYLLSRLINGPLSLRQIYFASSNGPVPDL------AYQVDFPRLEIVLEGEFV- 52 M H D++ L ++G + + + + P + + + +G F Sbjct: 1 MKHSDITPLKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHL 60 Query: 53 -DTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAK 111 + + +G ++ + + +F L ++ Sbjct: 61 EINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAFVFSLSMLRAFAADPVQEKLVQPLA 120 Query: 112 QH-------VARRGP---RIGSFLLQTLN---------------EMQMQPQEQQTARLIV 146 + + R+ P + LQ + + PQ + ++ Sbjct: 121 EGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASLL 180 Query: 147 ASLLSHCRD-LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHL 205 + LL A R + Y+ E +T + +A ++ Y Sbjct: 181 NIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCRF 240 Query: 206 FQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPS 265 F+K YLN R+ +A LLK D V E+A GF + F R FR +P Sbjct: 241 FKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPL 300 Query: 266 EYRR 269 +YR+ Sbjct: 301 QYRK 304 >UniRef50_C6D7A2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7A2_PAESJ Length = 281 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 11/276 (3%) Query: 9 LSRLINGPLSLRQI-YFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 S ++ P++L F + + + L I G L GD Sbjct: 4 FSFRVDRPVTLVMTGKFVAPTPEWRHMHRMLHEFELFIQTRGTLYIAKDNERHILNEGDF 63 Query: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ---NLAKQHVARRGPRIG 122 L +P G ++ + + + F Q G+ + D + ++ R ++ Sbjct: 64 LLMPPGAEQAGYRESDCSFYWLHFAVQD-GYQLEDHDPGYEPGKVWIPEKGTLRSQDKLI 122 Query: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD---LLGSQIQTASRSQALFEAIRDYID 179 L Q L + +EQ + +L + + +Q + Q L+ I DYI Sbjct: 123 VLLKQ-LQDSVRSYREQTLNNYLTTGILCELYNQLYFIQNQSGKKLKQQQLYNDIVDYIK 181 Query: 180 ERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKE 239 +L +A+ F + YLS LF + + +++ +++ AK+LL + +KE Sbjct: 182 WNRQESLKVSQLAEHFGYNAKYLSFLFSEIAGVPLKQFMLQEKMDAAKSLLADTNQSIKE 241 Query: 240 VAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 ++ G+ DS+ F F++ T +P++YR Y ++L Sbjct: 242 ISQQLGYPDSHQFMHSFKRITGLTPTDYRNAYANRL 277 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 17/260 (6%) Query: 29 GPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFS 86 + + + + G ++ G GDVL + + + Sbjct: 32 TSPYQKLHWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLLINSNDLHCAYETKDLVMTV 91 Query: 87 VLFGKQQLG---------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQ 137 + F FS + GK Y NL + G + Q Sbjct: 92 ISFDSTWFIHNLRFDPELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRS 151 Query: 138 EQQTARLIVASLLSHCRDLLGSQIQTASRSQ------ALFEAIRDYIDERYASALTRESV 191 ++ L+ + + S + +++ +A T E + Sbjct: 152 YATVVYSLLLQFLATVNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEEL 211 Query: 192 AQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNY 251 A Y+SP+ S +F++ + YL H RLE A T+L+G +KV +VA CGF Sbjct: 212 ASLVYLSPSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTN 271 Query: 252 FCRLFRKNTERSPSEYRRQY 271 F RLF+K+ +P ++Q+ Sbjct: 272 FNRLFKKHIGMTPKASQKQH 291 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 20/283 (7%) Query: 6 SYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFP---------RLEIVLEGEFVDTGA 56 S L+S LR P+ + Q RLE +L+G Sbjct: 27 SPLVSSYHAQWQGLRLDVHQQPGHETPEHSPQQHVLTVSLDQQIVRLERILDGRLQYEN- 85 Query: 57 GATLVPGDVLYVPAGGWNFPQWQAPATTFSV-----LFGKQQLGFSVVQWDGKQYQNLAK 111 + GDV +PA + +WQ+ + F + + +Q + + A Sbjct: 86 ---IAKGDVAIIPAQTHHISRWQSETKFLVLSVEPAFFTRMVIEAGDLQKIEIKPRFAAP 142 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD--LLGSQIQTASRSQA 169 + ++ L++ ++ E T L + L +C + S Sbjct: 143 DPLVQQIGLALQTELESEHKGSSIYIESLTTTLCIHLLKHYCVTGGTILDDHHHKGLSHW 202 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 YI E LT ++ A +S Y S F+++ ++Y+ + R+E AK L Sbjct: 203 KLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCRIERAKKL 262 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 L + ++++ GF ++F +FRK +P YR Q Sbjct: 263 LGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQVK 305 >UniRef50_UPI000178A031 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A031 Length = 260 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 10/248 (4%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPAT 83 ++ F L V+EG + G + GD++YVP G + Sbjct: 20 KCYPDWKIQKSRIGFHDLTFVVEGRANYYINGKKFAVEAGDLIYVPGGSVREAHTCKESP 79 Query: 84 TFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ-TLNEMQMQPQEQQTA 142 + F + + + K+ + + I S++ + L M QP A Sbjct: 80 MHAYPFNFFWAE--PHNYIRLPFGVVTKKLITK---EILSYIREFNLVWMNKQPFYMIHA 134 Query: 143 RLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYL 202 R + +L + QT + + +I+E YA LT A+ + P YL Sbjct: 135 RALFELILHRLLRCMHR--QTTMLMDPRIKKLTAFIEEHYAEDLTLNDFAEQLNLHPVYL 192 Query: 203 SHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTER 262 LF+ + EYL R+ +A+ +L + V E A CGF D +YF ++F+++ Sbjct: 193 GKLFKLNTGSTYKEYLQRVRVNNAEIMLATGNCTVTEAAECCGFYDLSYFSKVFKESKGY 252 Query: 263 SPSEYRRQ 270 PS +R Sbjct: 253 PPSAIKRH 260 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 11/183 (6%) Query: 99 VQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG 158 + + + + V ++ L + L + ++T L + Sbjct: 332 LSYIEEIAFHHPFPIVKQKMEETFILLGRMLTDFG--ISYERTTTFHSCGSLEELKRTAT 389 Query: 159 SQIQ---------TASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 Q+Q ++ +DYIDE Y LT E VA+ ISP Y S LF+ Sbjct: 390 EQLQHMVHYIQAWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDR 449 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 + F +Y+ R+ AK + + +KE+ G+ D NYF R+F+K+T SP+EYR+ Sbjct: 450 FGMTFIDYVTEVRIARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRK 509 Query: 270 QYH 272 + H Sbjct: 510 KLH 512 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 104/254 (40%), Gaps = 19/254 (7%) Query: 35 AYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWNFPQW--QAPATTFSVLFG 90 + D ++ IV +G EF+ L G +++ + + +++F Sbjct: 42 LHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIYHAIMFN 101 Query: 91 KQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG----------SFLLQTLNEMQMQPQEQQ 140 + L ++Y + I ++ +N +Q + + Sbjct: 102 AKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDIIQDKGYE 161 Query: 141 TARLI-----VASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAF 195 I L+ + +D+ +++ ++ + + +I + Y++ +T + +A A Sbjct: 162 LKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQDIADAV 221 Query: 196 YISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRL 255 ++S F+K+ + +YL + R+ + LLK L + +++ GF + +++ ++ Sbjct: 222 FVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNNVSHYIQI 281 Query: 256 FRKNTERSPSEYRR 269 F+K T ++P EYR Sbjct: 282 FKKKTGQTPLEYRN 295 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 16/263 (6%) Query: 22 IYFASSNGPVPDLA-YQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQW 78 IY + G P +A + + V +G GD+ +P G + Sbjct: 106 IYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLHAIYA 165 Query: 79 QA--PATTFSVLFGKQQLG----------FSVVQWDGKQYQNLAKQHVARRGPRIGSFLL 126 A +++F + LG + V G+ Q V +I + L Sbjct: 166 AAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISACLR 225 Query: 127 QTLNEMQMQPQEQQT-ARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + + + + + + LL + + + + + + I++ YA Sbjct: 226 RAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYAKP 285 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 LT +A S ++ F++ YLN RL A L+ D K+ +A G Sbjct: 286 LTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAENAG 345 Query: 246 FVDSNYFCRLFRKNTERSPSEYR 268 F + + F R F+K +P YR Sbjct: 346 FENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 19/281 (6%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVP 62 + ++ + + L + P + L + E + L Sbjct: 8 LHETVNYRKDMQIRLHNNDVCENYPP-----HWHTPFELIMPTESGYSVHCGEKEYVLDE 62 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQN---LAKQHVARRGP 119 GD++ + G + L Q+ + ++ + + Sbjct: 63 GDIIIICPGVIHELFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHA 122 Query: 120 RIGSFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRDLLGSQIQ-----TASRSQALFEA 173 +I +L+ +E P + + +L Q ++ Q E Sbjct: 123 QIHRLMLEIRDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEK 182 Query: 174 ---IRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 I +YI+E YA L+ E VA S + + LF++ F +YLN R+ HAK LL Sbjct: 183 FLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLL 242 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 +L V +++ CGF + + F R+FRK T +P+E R+ Y Sbjct: 243 VDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR-SQALFEAIRDYIDERYA 183 L LNE + ++ ++ + ++L +T S + + I+ YI E YA Sbjct: 359 LDDILNEQIFSVNDCSSSEELLEKVKVILQELTREDQRTGETGSSRIVQEIKRYIQEHYA 418 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 + ++A Y+SP YLS LF++ + YL + R+EHAK L +DLK+ EVA Sbjct: 419 ENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLKIYEVAEL 478 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQ 270 G+ F R+F+K +P EYR Q Sbjct: 479 TGYASPKQFIRVFKKEVGVTPGEYRNQ 505 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 25/273 (9%) Query: 25 ASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQWQAPA 82 + N L + ++ L V GE V L GD + + ++ + P Sbjct: 62 YNPNYQDERLFHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQ 121 Query: 83 TT-FSVLFGKQ-----------------QLGFSVVQWDGKQYQNLAKQHVARRGPR-IGS 123 F+++ K+ K +L H + + Sbjct: 122 DVVFNIMLSKEIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIK 181 Query: 124 FLLQTLNEMQMQPQE--QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDER 181 +++ E + + + A L R+ S +Q + I + + Sbjct: 182 LMVEEFIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYH-MQQH 240 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 L+ ES+A+AF+ SP+++S LF+ + E LN R++ AK+LL+ L + E+A Sbjct: 241 LRQ-LSLESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIA 299 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 + G D++Y ++F+K +P +YR+Q+ + Sbjct: 300 DSIGVNDTSYLNKIFKKKYGLTPLQYRKQFQQE 332 >UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEI2_9ENTR Length = 289 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 13/262 (4%) Query: 18 SLRQIYFASS-NGPVPDLAYQVD-FPRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGW 73 L I A +P + ++ D L + G + G G + GD+L A Sbjct: 22 RLTFICKAEGIEAAIPRVMHKHDDRFELMFIRAGSGIYNIDGRGYQVQRGDLLLFNANVL 81 Query: 74 NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQ 133 + + PA + +L + V+ + Q + Q ++M Sbjct: 82 HD---ENPAPSDDLLIFSCGVEQLKVEGLPQNVLTTRHQVAVMPSGEFYDEICQLFDQMW 138 Query: 134 MQPQEQQTARL-----IVASLLSHCRDLLGSQIQTASRSQALF-EAIRDYIDERYASALT 187 ++ +++ LL CR++ Q + L + I+DYID+ Y + Sbjct: 139 SHVSSKRLFSSEVGDNLISILLLLCRNIWIENKQDQQNNHTLLGQRIKDYIDDHYKDEIA 198 Query: 188 RESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFV 247 +S+ A ++ YL+H+F+ +Y R+ A++LL +L V EVA+A G+ Sbjct: 199 LKSITAALNMNQFYLAHVFKAYSGYSPKQYQTRRRIGEAQSLLLSTNLGVTEVANAVGYD 258 Query: 248 DSNYFCRLFRKNTERSPSEYRR 269 + N F R+F P+ Y++ Sbjct: 259 NVNNFHRIFLNLIGIPPARYKK 280 >UniRef50_A8MKK7 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MKK7_ALKOO Length = 275 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 99/276 (35%), Gaps = 11/276 (3%) Query: 4 DVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLV 61 + + L I ++ I D Y I ++GE F+ L Sbjct: 7 EANKLAEIFIKASPTVVDIRKIRIEPGQADYGYITSLYAFIIPVKGEAKFIFNDIPYHLN 66 Query: 62 PGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQW-DGKQYQNLAKQHVARRGPR 120 PG V++ ++ + +S+ + + + R + Sbjct: 67 PGKVIHAGPNI-----KVNKRVVGDSIWEYYLIHYSLKNTALEDDFVEIPYELTIGRNIK 121 Query: 121 IGSFLLQTLNEMQ-MQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYID 179 + L + P + + +LL Q + R + E +YI Sbjct: 122 VLEMLKSMNKAWRISDPISSLKVQSLFYNLLYEIFKSHHDQAKEEDR--WIVEEAMNYIH 179 Query: 180 ERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKE 239 Y +T + +A+ + + N S LF + YL R++ A LL + V+E Sbjct: 180 AYYMEPITLKDLAKRYDLDKNRFSRLFNRYAGARPMNYLISYRMKRASELLLTSNFSVRE 239 Query: 240 VAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 V+ G+ + +YF +LF+K + PS YRR+++ L Sbjct: 240 VSENVGYTNVSYFTKLFKKYNGQLPSTYRRKFYETL 275 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 90/267 (33%), Gaps = 13/267 (4%) Query: 19 LRQIYFASSNGP--VPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVPAGGWN 74 L+ ++F + ++ +F L +VL G + L PG V + G + Sbjct: 31 LKSVHFMNDWEKELSHTQYHKHNFYELAVVLRGAGTHLTDSQKLPLRPGSVFLLHPGESH 90 Query: 75 FPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGP---------RIGSFL 125 ++ P T + +F Q L G L R + L Sbjct: 91 AYEYSEPLTLMNFMFDSQILRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILL 150 Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 E + + + + L R + ++ Y Sbjct: 151 HAMAMESRQRSAGAELLLISHLLNLLVLVLRKSCSYVERERFNSDIGIAVAFMRRNYQEE 210 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 ++ +A+ +S + F++ ++L + R+ A L D+ + E+A A G Sbjct: 211 ISLPKLARLANLSESSFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATG 270 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYH 272 F DS YF R FR+ SP YR Q H Sbjct: 271 FSDSLYFSRQFRRQVGVSPKNYRSQAH 297 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 10/269 (3%) Query: 11 RLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYV 68 N ++L + ++ D +L ++LEGE GD+++V Sbjct: 2 YYSNLRVNLITATCGYVSKDWGEVNEHPDVNKLYLILEGEGSVTCNKTEYYPEVGDIMFV 61 Query: 69 PAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR-RGPRIGSFLLQ 127 P G N K F L+ + + +I L Sbjct: 62 PKGSLNSYATNKDKPY-----KKYWCHFDADILSTDIAVYLSFPLLVKNANKKISYKLFA 116 Query: 128 TLNEMQMQ--PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 L + P + A+ ++ ++ +Q + + YIDE Sbjct: 117 KLVKYHESKNPIDAIYAKALLLRIIHFYFSECEFVKINDVPNQTVMGKLVKYIDENLERK 176 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 +T +A+ +++ NYL LF T EY+ + ++E AK LL+ ++E+++ G Sbjct: 177 ITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNKKIEKAKILLRTTTDTIEEISNTLG 236 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 F YF +F+K SPS++R+ + Sbjct: 237 FSSPFYFSAVFKKRIGYSPSQFRQSRMGK 265 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 106/282 (37%), Gaps = 18/282 (6%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGA 58 M + + ++ F N L + + + +G G+ Sbjct: 1 MDLTNASNFEHISFNDITFPFNCFYIKNSN--TLPHWHNHFEMVFSQKGSCMVYINGSSF 58 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQY------QNLAKQ 112 + ++ +P G + Q + +++ G+ V + Sbjct: 59 LVSENQLIIIPPGSLHSIFPQGSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPP 118 Query: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQT-----ARLIVASLLSHCRDLLGSQIQTASR- 166 R+ ++E+Q + +++ + + L S ++ L S+ ++ Sbjct: 119 LHLSEKDRVFKKCFLLVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKNKL 178 Query: 167 --SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 S L + DY+ Y+ +T ++ ++S + S LF+ F EYL RLE Sbjct: 179 PDSTRLIKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLE 238 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 A+ +L G D+ + ++ GF +SNYFCRL++K PS+ Sbjct: 239 KARKILIGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSK 280 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 12/239 (5%) Query: 41 PRLEIVL--EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSV 98 +L + +G F + G ++ G +QA T ++ G+S Sbjct: 67 FQLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAEDGTE--VYWIHFTGYSA 124 Query: 99 VQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG 158 + + H + + + + E+ + +V + L LLG Sbjct: 125 YDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQEL---NSHRPLGSHMVNAYLLEMLTLLG 181 Query: 159 SQIQTASR-----SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIG 213 ++QTA + +I E+Y+ +L+ +A +S H F++ + Sbjct: 182 RRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEVTGMT 241 Query: 214 FNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 +Y+ R+ AK LL L VKEVA G+ + YF R+FR PSEY++Q+ Sbjct: 242 PMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYKKQFQ 300 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 7 YLLSRLINGPLSL-RQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPG 63 L ++ +G + L ++Y ++ D +L G E ++ G Sbjct: 8 QLKEQVNHGNMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTG 67 Query: 64 DVLYVPAGGWNFPQWQAPATTFSV--LFGKQQLGFSVVQWDGKQYQN------LAKQHVA 115 D + +P G ++ + + V +F + + + + + N L +++ Sbjct: 68 DFIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNII 127 Query: 116 RR----GPRIGSFLLQTLNEMQMQPQEQQTARL--IVASLLSHCRDLLGSQIQTASRSQA 169 R +I + + + Q + + + ++ S + Sbjct: 128 RTSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSD 187 Query: 170 LFE-----AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 L + + YI Y + ++ + +A S + F+ +Y+N+ R++ Sbjct: 188 LIKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQ 247 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 A LL +L + E+A+ GF D +YF + F+K SP++YR+ Sbjct: 248 KATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKSN 294 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 81/223 (36%), Gaps = 2/223 (0%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ 107 G L G V + + + + ++ + W+ Q Sbjct: 64 SGRLDIGEKSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGSQATECWEYIQAN 123 Query: 108 NLAKQHVARRGPRIGSFLLQTLNE-MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR 166 + ++ LL+ E + + + + + C + + + + Sbjct: 124 GGPVLSIPPEA-KLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRFMKNIDNPSKQ 182 Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 +I Y ++ +A A +S YL +LF++ +Y+ R+E A Sbjct: 183 VPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQYITKLRIEKA 242 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 LL +L V ++A A G+ ++NYF ++F+K SP ++R Sbjct: 243 MDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRE 285 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 3/160 (1%) Query: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFE 172 V + L +++ ++P Q I+ + + + + + F+ Sbjct: 89 SVYDDFKFVQKALRIKVDDYLLKPIRPQKIVDILNEFIKDNKKRIEESNKNCTEE---FQ 145 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 + +YID+ + + +T + VA S +YLS LF+K I FN Y+ R++ AK +L Sbjct: 146 EVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILIN 205 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 ++ + E+A + G+ + NYFC++F+K +PSEYR Sbjct: 206 SNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYRTNSR 245 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 100/286 (34%), Gaps = 23/286 (8%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVL 66 G I + + +F + V G G L GD+L Sbjct: 42 AEMFFRGDNRFSVILHPKL--AIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLL 99 Query: 67 YVPAGGWNFPQWQA-PATTFSVLFGKQQLGFSVVQW--DGKQYQNLAKQHVARRGPRIGS 123 ++ + + F++L L S+ + + N + + R Sbjct: 100 FLNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKY 159 Query: 124 FLLQT-------------LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTAS--RSQ 168 L Q + ++ P + +L+S Q T + Sbjct: 160 LLFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGK 219 Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 A I ++ YA A T +S A+ F+ + +YLS L ++ F + ++ A+ Sbjct: 220 AFVPEILQWLSNHYAGA-TLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAER 278 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 LK L V+ ++ G+ D+ YFCR+F+ T +PSEYRR Sbjct: 279 YLKETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQEN 324 >UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8H9_9CLOT Length = 358 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 27/295 (9%) Query: 8 LLSRLINGPLSLRQIYFASSNGP-----VPDLAYQVDFPRLEIVLEGEFVD---TGAGAT 59 L+S N + A P P L + DF L V G+F++ Sbjct: 62 LISEKENFYPGSDVVVHAHRTPPGEPQRKPKLGHYHDFYELAFVYRGKFINEFPNHDRIE 121 Query: 60 LVPGDVLYVPAGGWNFPQWQAPATT-FSVLFGKQQLGFSVVQW--DGKQYQNLAKQHVA- 115 + ++ + + P Q P F++L K + +V D K + N + Sbjct: 122 IDESSLILLNPYAVHLPYTQTPDDIVFNILLRKSFVENKLVNMISDNKIFFNFFLDSIYG 181 Query: 116 ----------RRGPRIGSFLLQTLNEMQMQPQEQQ----TARLIVASLLSHCRDLLGSQI 161 + + + +L + E+ + + + + + ++L S+ Sbjct: 182 NEHITNFLVFKNNQEVSNLILSLIMELCDRQLYFEQVVNSYLVALFAILVRIHQQEFSEA 241 Query: 162 QTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHT 221 I YI Y+ ++ VA+ F S Y+S L ++ ++ F+E +++ Sbjct: 242 MDGLAKNRTIADILSYIRYNYSH-VSLAEVAEHFNYSIGYMSRLIKQETSMSFSEIVSNY 300 Query: 222 RLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT 276 RLE A LK ++ +++ G+ D++YF + F+K SP +YR+++ L Sbjct: 301 RLEIACNYLKNSNISTEKITEIIGYSDTSYFYKAFKKQQGFSPIDYRKRFQKNLA 355 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 98/280 (35%), Gaps = 23/280 (8%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDF---------PRLEIVLEGEFVDTGAGATL 60 S G L P + +E L GE G Sbjct: 38 SSQAAGWDGLILKEHHQPAHTTPVHKFTHHVLILSPLDNVFEVEYQL-GELSFQGPYGH- 95 Query: 61 VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGP- 119 G+++ +PA QW + S+ Q + L + Sbjct: 96 --GELMIIPAHTPQQCQWHQAVSFLSLSLEPQFFETAAYDLTQVNRFELLPNIAVQDRLI 153 Query: 120 -RIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA------LFE 172 IG+ L Q LN ++ + +V +L H +Q+ S L Sbjct: 154 YDIGTALRQELNTLEF--TDHLYIDSLVTALSIHLMKRYCTQVPRLKDSSDQGLPPALLN 211 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 +YI++ L +AQ +S Y S LF+K+ + ++Y R++ AK LL+ Sbjct: 212 RALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGLLRQ 271 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 + + +A CGF + ++ + FR+ T +P +R QY Sbjct: 272 TNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 20/258 (7%) Query: 33 DLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQW-QAPATTFSVLF 89 + D + V +GE G L G+ L++ +G + +F Sbjct: 54 HDVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMF 113 Query: 90 GKQQLGFSVVQWDGKQYQNLAKQH-------VARRGPRIGSFLLQT--LNEMQMQPQ--- 137 ++ LGF + Y + + R L L E+ + Sbjct: 114 PEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVT 173 Query: 138 --EQQTARLIVASLLSHCRDLLGSQIQTAS---RSQALFEAIRDYIDERYASALTRESVA 192 E + A + A L R++ + + + + Q + + YI E Y A+T + +A Sbjct: 174 AFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIA 233 Query: 193 QAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYF 252 ++ IS F+ YL+ R+ LL+ DL + ++A GF DS+YF Sbjct: 234 ESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYF 293 Query: 253 CRLFRKNTERSPSEYRRQ 270 + F+K +P +YR Sbjct: 294 IQAFKKKNGMTPKQYRNH 311 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 17/259 (6%) Query: 35 AYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQ 92 + D+ + L GE ++ + GD++ + G ++ + VL G + Sbjct: 29 EHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLINKGVFHKTTYAGAINYERVLVGFK 88 Query: 93 ---------QLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTA- 142 Q F+ + ++ ++ + + + ++E + +T Sbjct: 89 EHILKDIIPQEEFTELLSTFEKDISIINLSIQNQH-TFEVLFTKLIHENNNRLSSYETYS 147 Query: 143 RLIVASLLSHCRDLLG----SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYIS 198 +L++ LL + L S ++ S I YI + L + +A F IS Sbjct: 148 KLLLVELLININRHLEKGHVSYLEFPSALHKKVSEIAQYITDNCDKVLNLDILAHKFLIS 207 Query: 199 PNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRK 258 P YLS +F+ +++N R++ ++ LL L + E+ GF + +F R+F Sbjct: 208 PYYLSRVFKDVTGFNLIQFINSERIKKSQYLLIETSLPIYEICEVVGFNSTIHFTRVFNS 267 Query: 259 NTERSPSEYRRQYHSQLTE 277 T SPS+YR+ Q Sbjct: 268 FTSMSPSKYRKLNSKQKDN 286 >UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lachnospiraceae RepID=C7G9P1_9FIRM Length = 291 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 107/290 (36%), Gaps = 17/290 (5%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGA 58 M + + +IY+ + N + D+ LEG Sbjct: 1 MRRQLQSPFNERQYMLSKDFEIYYYNDNHFYGVTDHTHDYYEFYFFLEGNVTISIEKEHH 60 Query: 59 TLVPGDVLYVPAGGWNFPQWQAPA-TTFSVLFGKQQLGFSVVQWDGKQY----------Q 107 L PGD++++P G + +F Q ++ K Y Sbjct: 61 HLKPGDMVFIPPGIHHHVSSVGETLPYQRFVFWISQDYCQKLKELSKDYVYLIEHAQDTH 120 Query: 108 NLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI-VASLLSHCRDLLGSQIQTASR 166 + + + + + + + E+ + + V L+ H + A+R Sbjct: 121 HFIYHYDVVAFNALSAKIFRLIEEIHADRFGKAAKIELCVNDLMLHINRAVYEAEHPAAR 180 Query: 167 SQA--LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLE 224 A L++ I YI+ L+ +S+++AF++S ++SH+F+ I ++Y+ RL Sbjct: 181 KDASGLYDGILQYIESHLDEDLSLDSLSKAFFVSKYHISHIFKDNFGISVHQYITKKRLS 240 Query: 225 HAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQ 274 + + + + ++ GF D F R F+K SP EY+ Y + Sbjct: 241 MCRDAIL-SNENITKIYLMYGFKDYTSFFRAFKKEYGISPKEYKELYAQK 289 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 106/288 (36%), Gaps = 22/288 (7%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVL 66 + +N + I+ N +Q + + + +E + L PG++L Sbjct: 24 VDYYLNSNIR---IWHNIQNEGY--ALHQHNAIEILVPIENSYTVLANNHTYQLEPGNIL 78 Query: 67 YVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLL 126 ++P + F +F L + R P I + Sbjct: 79 FIPGLTLHEIMKPDWGERFIFMFNMDPLTSFHDYSSLEPVLLDPCFLTKRTTPGIYEHIY 138 Query: 127 QTLNEMQMQP-------QEQQTARLIVASLLSHCRDLLG-------SQIQTASRSQALFE 172 L E+ +E ++ L + R+ + + + F Sbjct: 139 SRLMEISTLYFSSSITFREYSIYANLIDILTTIGREYYDALFAGTENTAEKSYDYYQKFN 198 Query: 173 AIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG 232 ++ YI++ +A LT E +A S + + LF++ F +YL+ R++ A+TLL Sbjct: 199 SLLSYINDHFAEPLTLEKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRIQAAQTLL-T 257 Query: 233 YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 D + +A GF +S F R F+K T SPSEYR ++ + T Sbjct: 258 TDASITSIAFQTGFNNSTSFTRCFKKYTNYSPSEYRTKFIEDVPGNVT 305 >UniRef50_Q9RC93 Orf1 protein n=1 Tax=Bacillus sp. GL1 RepID=Q9RC93_BACGL Length = 297 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 20/288 (6%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVP 69 L GP + Y ++N + L V EG E + A + PG +L Sbjct: 10 LNLGPDAFFSSYRQTTNDEDWLAFHAHQGIELLYVHEGNGEAMTEDARYPIRPGTLLLFL 69 Query: 70 AGGWNFPQWQA----PATTFSVLFGKQQLG--FSVVQWDGKQYQNLAKQHVARRGPRIG- 122 + + + P V F + + + + + L + ++ +G Sbjct: 70 PYQLHKVEVPSVPGAPYVRSLVKFDPRIVEPYLTPYPALARWFLRLKRGLLSSSFCDLGT 129 Query: 123 -SFLLQTLNEMQMQ-----PQEQQTARLIVASLLSHCRDLLGSQ-----IQTASRSQALF 171 L L + + P +++ L + SLL R + A Sbjct: 130 SERLPGLLRDFHERCGAVGPAKEEERSLFLVSLLHELRHRAFPEAGRDGSPEAEGRSLHI 189 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + + D+I+ERYA +S++ ++SP YLSHLF++ +Y+ R+ A LL Sbjct: 190 DRMMDWIEERYARPFDLQSLSGELHLSPYYLSHLFKEYTGSSIRDYITARRIREACRLLS 249 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKP 279 ++ +A G +++FC+LF+K SP +RR + P Sbjct: 250 STSDSIRSIAEQVGGFGASHFCQLFKKCKGVSPETFRRTVQQGFSAHP 297 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 10/200 (5%) Query: 71 GGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRG--PRIGSFLLQT 128 G + + +A +F Q + + LA++ V +G P LL Sbjct: 331 GMEHEARQEATVFAGW-VFKNQASALEEEKLQLMEMLLLARRMVQDQGGAPVRDQELLSA 389 Query: 129 LNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 L + E++TAR ++ +L + + + +DYI + + ++ Sbjct: 390 L----LAAGEEETAR---QKFVAAMVELAQAVVIKNQEPDGIITRAQDYIRQNFRKDISL 442 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 E VA+ ISP Y S LF++ + F EYL R+E AK LL +L +K+V G+ + Sbjct: 443 EEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYAN 502 Query: 249 SNYFCRLFRKNTERSPSEYR 268 NYF R+F+K +P+E+R Sbjct: 503 PNYFSRIFKKWVGITPTEFR 522 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 9/262 (3%) Query: 12 LINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG--EFVDTGAGATLVPGDVLYVP 69 +Y ++ P + + I +G E G L D++ Sbjct: 4 FYENKSRTFNLYQGTNMTFPP---HLHKEIEILICQKGVVEATCNGQTLLLEESDIMIAL 60 Query: 70 AGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL 129 + + + + L + + + + + ++ L Sbjct: 61 PNTIHSYETKEYCEYILCILSPSTLPLFKPYFQKE----FTTPFLQMDQTKKITPFVRML 116 Query: 130 NEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRE 189 E + Q+ ++ + S + S + + +I Y+DE Y + E Sbjct: 117 LEEWENDRNQELMISYLSVIFSLILKNTTFTEKATSTYEDILPSILLYVDEHYLEQFSLE 176 Query: 190 SVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDS 249 +A +P+Y+S LF + Y+ R+ +AK LL+ + + E+A+ CGF Sbjct: 177 DLASHLGFNPSYVSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQ 236 Query: 250 NYFCRLFRKNTERSPSEYRRQY 271 F R+F + +P EYR+ Y Sbjct: 237 RSFNRVFLQLVNTTPREYRKTY 258 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 105/299 (35%), Gaps = 26/299 (8%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEF--VDTGAGATLVP 62 ++ ++ + L + P + + + + + + L Sbjct: 8 MTETINYRNSMDFRL---FHNVDYEDYPT--HWHVGIEILMPVTEIYGVIVDQKKYVLQE 62 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIG 122 GD+L V +G + + + F L P + Sbjct: 63 GDILIVNSGVPHALEAPPTGERIILQFDPALLYSLKEMETLLLLFPPVFYITPENEPDLY 122 Query: 123 SFLLQTLNEMQMQPQEQQTAR--LIVASLLSH-----------------CRDLLGSQIQT 163 + + E+ + QQ L+ ASL+ D+ S+ Sbjct: 123 PLVKAKMEEIIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSKQDR 182 Query: 164 ASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRL 223 Q + +YI++ Y LT E A+ S + + +F+K + F EYLN R+ Sbjct: 183 QWEYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRV 242 Query: 224 EHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTP 282 + A+ LL ++ + +VA GF + F R F+ + SPSE+R ++ EK T+ Sbjct: 243 KCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFRGAILDRIREKGTSS 301 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 99/284 (34%), Gaps = 7/284 (2%) Query: 1 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQV---DFPRLEIVLEG--EFVDTG 55 M + + L N +Y P ++ D + ++EG F+ G Sbjct: 1 MKNSMEMLCFPTYNRESRDLLVYQCGREECTPSHSFGPAIRDHFLIHYIIEGSGTFLVNG 60 Query: 56 AGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVA 115 L + + + G + + Sbjct: 61 KLYKLHKNQGFIIFPDDITYYEADNHTPWIYKWVGFKGIKAEY-YLQCAGLTKENPIFEY 119 Query: 116 RRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQAL-FEAI 174 + + +++ + + +++ LS +L + + + + Sbjct: 120 SNDKFLEECFDNMIKASKLKYASELKLQGLLSIFLSELIELSSIDSSSDYYYKDVYIKKC 179 Query: 175 RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYD 234 +YI+ Y+ L +A ++ Y S +F+++ + +Y+ R+ A L+K + Sbjct: 180 LNYIEMNYSRKLLISEIAALLGLNTKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFK 239 Query: 235 LKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEK 278 L + +++ + G+ DS F ++F+K SP +YR Q+ + ++ Sbjct: 240 LSICDISRSVGYDDSLAFSKIFKKQKGMSPKKYREQFINSNSKN 283 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 97/276 (35%), Gaps = 9/276 (3%) Query: 13 INGPLSLRQIYFASSNGPVPDLAYQVD---FPRLEIVLEG--EFVDTGAGATLVPGDVLY 67 S Q+ + VP Y + L +V G G L G+ Sbjct: 29 AENKASDLQLMYCGKERCVPGHRYGPNKRNLYLLHVVYSGVGTLFVNGEYYHLSKGNAFL 88 Query: 68 VPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQ 127 + + + G + + + + + + + ++ + Sbjct: 89 LYPHVEAWYEADLTEPWSYFWIGVRGVDADSF-FTEVGFSKEKPVGIVHQMDNLLLYINK 147 Query: 128 TLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQAL---FEAIRDYIDERYAS 184 L + +EQ + + ++ + + L +R Y+DE Y Sbjct: 148 ILQKQDYTIEEQLSRSAYMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHE 207 Query: 185 ALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHAC 244 ++ ++A+ I +L + F+K EYL + R+++AK +L+ + E+A+ Sbjct: 208 DISISALAKEMGIHRAHLFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMV 267 Query: 245 GFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 G+ D F ++FR+ SP +YR L + T Sbjct: 268 GYHDPLSFSKIFRQKIGVSPLQYRNMKEEMLYNRET 303 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 103/267 (38%), Gaps = 25/267 (9%) Query: 28 NGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQAP-ATT 84 N P+ ++ DF L V +G + L GD+ + A + T Sbjct: 69 NIPMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTV 128 Query: 85 FSVLFGKQQLG--FSVVQWDGKQYQNLAKQHVARRG---------------PRIGSFLLQ 127 +++L + F + + + + + ++ +++ + Sbjct: 129 YNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHR 188 Query: 128 TLNE--MQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRS--QALFEAIRDYIDERYA 183 + E + + +V + R Q Q +S + I YI + Y Sbjct: 189 LIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY- 247 Query: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 ++ + VA F PNYLS L +K F+E L + R AK L+ D+ + E+ + Sbjct: 248 KDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYM 307 Query: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQ 270 G+ + ++F R F++ +P++YR+Q Sbjct: 308 VGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 1/165 (0%) Query: 110 AKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGS-QIQTASRSQ 168 + + I L + Q + I SL+ + Q SR + Sbjct: 344 LFDLILTKAKEICPVLKDEFAKSMAFSLNMQESNNIEKSLIEFVHYCIDKIQNVKESRHK 403 Query: 169 ALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKT 228 + + YI+ YA+ + +A+ +SPNY +F++ F ++LN R+ AK Sbjct: 404 KIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRINKAKE 463 Query: 229 LLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 LL +LK EVA GF D YF +F+K T SPS+++ + Sbjct: 464 LLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQK 508 >UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 Tax=Ruminococcaceae RepID=C6JAN7_9FIRM Length = 291 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 14/234 (5%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ 107 EGE + G +L GD +++ L+ + F + Sbjct: 64 EGELICEGRTYSLRTGDCVFIDCRKQYAHSSSEK------LWSLSWIHFYGPNMTAIYDK 117 Query: 108 NLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI--------VASLLSHCRDLLGS 159 L + A P S L+ + + R + + +LL + G Sbjct: 118 YLERGGRAVFHPVSVSGFLEICHRIYELADSDDYIRDMKINSELNYLLTLLMNESWHPGE 177 Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 + + A + ++ Y+DE Y ++ + +A+ F+IS YL+ +F++ + + YL Sbjct: 178 KHRDADLKKQNVLPVKQYLDEHYQEKISLDFLAEHFFISKYYLTRVFREQFGVSISSYLM 237 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + R+ AK +L+ + K+K + + CG + +YF R+FR+ SP EYR ++ Sbjct: 238 NRRVTKAKYMLRFSNEKIKTIGYKCGLGEPHYFSRVFRQMEGMSPLEYREKWEK 291 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 17/245 (6%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV----QWDG 103 G A TL GDV +P G + + + + +GF V + Sbjct: 6 RGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETP-----WSYRWIGFEGVSARECLES 60 Query: 104 KQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRD-------- 155 + R ++G ++ Q L Q+ + + ++ + + Sbjct: 61 AGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120 Query: 156 LLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFN 215 + + S E +YI+E Y+ L +A ++ +YL+ FQ+ Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180 Query: 216 EYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 EYL R+E AKTLLK D++V EVA G+ D F ++F+ T RSP EY+ + + Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSRLV 240 Query: 276 TEKPT 280 K Sbjct: 241 VGKKK 245 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 96/282 (34%), Gaps = 22/282 (7%) Query: 14 NGPLSLRQIYFASSNGPVPDLA-YQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPA 70 N IY S + + +LEG + L GD L+V + Sbjct: 19 NYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVNQNLYQLGKGDCLFVNS 78 Query: 71 GGWNFPQWQAPATTFSVL--FGKQQL-GFSVVQWDGKQYQNLAK-----QHVARRGPRIG 122 + ++ F + G+ D L V R G Sbjct: 79 NALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNFTSFVFRDGADGN 138 Query: 123 SFLLQTLNEMQMQPQEQQTARLI-VASLLSHCRDLLGSQIQTAS----------RSQALF 171 + + EM E+ + + S L LL + Q + + + Sbjct: 139 ETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSGAGLAEAKQISRL 198 Query: 172 EAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231 + +I Y +T + +A++ + S + +F+KT EYL R++ + LL Sbjct: 199 KNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQKSLPLLV 258 Query: 232 GYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 + E+A GF S+Y+ +FRK SP EY++ + Sbjct: 259 TDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNLMN 300 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%) Query: 43 LEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ 100 + V +G + DV+ + G + + F+ Q Sbjct: 36 IFYVNKGAGICHSEYEQHEIKKRDVIILNPGT--TITLDPIRKIDWICIALSGVVFTSSQ 93 Query: 101 WDGKQYQNLAKQHVARRGPRIGSFL-LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGS 159 Q H P + +L L + E + ++ ++ H Sbjct: 94 EANSSSQLFVASHP---NPTLKYYLDLALIEESNRFRGSDLIMKKLIECVMIHLLRHNEL 150 Query: 160 QIQTAS--RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEY 217 I+ AS + +++YI + Y+ +T E ++ I+ YL LF++ + +Y Sbjct: 151 SIKDASLQAKHNEIDVLQNYIRKNYSKKITLEELSDLVDINKYYLIRLFKQQTGLSPIDY 210 Query: 218 LNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 L H RLE A+ LL ++ V +++ GF ++F + F++N +PS+YR++Y Sbjct: 211 LIHVRLEEAEKLLAKSNITVSDISDRVGFHSPSHFSKTFKENNHCTPSQYRKRY 264 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 18/243 (7%) Query: 42 RLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGF----- 96 R+ +V G F + G+ L V G + + LG Sbjct: 34 RIILVSGGSFTL------VRGGESLLVNPGCVLLLGPGGGLLQQAGHIAPELLGCRFPAG 87 Query: 97 ------SVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLI-VASL 149 +++Q D Q + L L MQ E ++ +I + + Sbjct: 88 VLPVLKNLMQRDFMPLFEPGAQTALYGPVQWSGRLRTLLGMMQSAESEPESPGMIYLTLI 147 Query: 150 LSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKT 209 L + S+ Q E I Y+ Y + VA FY+SP YLS LF++ Sbjct: 148 LHYVEQECRSEKQDIRPRNETVEQICAYLAANYQQKFSLTDVAARFYLSPYYLSRLFRRV 207 Query: 210 GAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRR 269 +Y+N R+E A+ LL+ DL + VA GF + +F R+FR+ P +YR+ Sbjct: 208 TGQSIVDYINGRRIEAAQRLLESTDLNISAVAEQTGFASAAHFRRVFRETMGTGPLQYRK 267 Query: 270 QYH 272 + Sbjct: 268 SHR 270 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 105/283 (37%), Gaps = 20/283 (7%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVL 66 L P I + + +P+ + DF L IVL G + + GDV Sbjct: 6 LHYFTQDPSFPFFIQYGFHDDAMPEHFH-HDFFELVIVLNGTATHIVNSEEFFIKKGDVF 64 Query: 67 YVPAGGWNFPQWQAPATTFSVLFGKQQLG---------------FSVVQWDGKQYQNLAK 111 + + ++++ ++L F + + K+Y Sbjct: 65 VFNMDLSHGYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNT 124 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQ--EQQTARLIVASLLSHCRDLLGSQIQTASRSQA 169 ++ + L +NE + Q ++ + + + + Sbjct: 125 LSLSISSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFV 184 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 ++++ Y + + E +A ++S + + +F++ + H R+ HA +L Sbjct: 185 HLAKAILFLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSL 244 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 LK +L + ++A GF DSNYF R F+K T +P EYR +Y Sbjct: 245 LKNSNLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 100/257 (38%), Gaps = 9/257 (3%) Query: 35 AYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQWQ-APATTFSVLFGK 91 A+ +L+G F G T G ++++ + Q + A + +V F Sbjct: 44 AHWHAAAEFICILKGSFAIGVDGNSKTYHSGGMVFLAPNKIHSLQSKTANSRLLTVQFSP 103 Query: 92 QQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARL-IVASLL 150 Y + +H + + + +L +E + + ++ LL Sbjct: 104 LLFQQLTGDVSFN-YGVKSFEHQSEKDRSVWDAMLDLASEYVTDLDTISFSHMSLIYRLL 162 Query: 151 SHCRDLLG----SQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 ++ + +Q L + YID Y LT +A+ +S +Y+S +F Sbjct: 163 ANIERVSEVINLTQNSVRDNDDELIKTCLTYIDSHYMEPLTLTDIAERSGLSYHYVSRMF 222 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 ++ F +YL R+ A LL + ++AH CGF + FRK +++P+ Sbjct: 223 KRVCGFNFKDYLTFIRVSKALPLLCDTTFPITDIAHKCGFSEHKLLIAAFRKYYDQTPTA 282 Query: 267 YRRQYHSQLTEKPTTPE 283 +R++Y+ + + + Sbjct: 283 FRKKYNGGYNDTSSNLD 299 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 16/254 (6%) Query: 36 YQVDFPRLEIVLEGEFVDT--GAGATLVPGDVLYVPAGGWNFPQWQAPATTFS------- 86 + + ++ ++G +VPG+++ + ++ + + F Sbjct: 34 HWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKFYSIRIEPT 93 Query: 87 VLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQT----- 141 LF Q ++ ++ + I + L+E + + Sbjct: 94 FLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYELSIKAN 153 Query: 142 ARLIVASLLSHCRDLLGSQIQTASRSQAL--FEAIRDYIDERYASALTRESVAQAFYISP 199 ++ LL D + S+ + R +L FE I D I+E+Y +T + +A +S Sbjct: 154 IYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVNLSA 213 Query: 200 NYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKN 259 ++ F++ +++N RL+ A LK DL + E+A CGF NYF RLF++N Sbjct: 214 HHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKRN 273 Query: 260 TERSPSEYRRQYHS 273 SP++YR ++ Sbjct: 274 YNISPTKYRNEHRE 287 >UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU Length = 284 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 22/278 (7%) Query: 9 LSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVL 66 +S P L IY +S+ + DF V+ G + + +L Sbjct: 6 ISIEKFNPEVLYSIYCTTSDT-FEGNYHCHDFIEFSYVVSGNVNYKIDDKFYLIKEKTLL 64 Query: 67 YVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQH------VARRGPR 120 AG ++ + + + +GF ++ DG ++ K + G Sbjct: 65 PFNAGVYHHEYFTKG---INSNLKELHVGFRNLKIDGLPLNHILKNSSTVPMQFNQYGED 121 Query: 121 IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR----------SQAL 170 L+ + E + ++ + L + ++ + + Sbjct: 122 FHKCCLEIIEEHECSEIGKELVLKSLVMKLIALFLKETNYVKNTKKIKQYSLPFYDKSNI 181 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 E I DY ++ Y + ++ +++ YIS Y+S F++ YL + RL+ AK LL Sbjct: 182 VEIIIDYFEKNYMNNISLNDISKNMYISSVYISKTFKEKTGESPINYLINLRLQKAKDLL 241 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 ++ VK +A + G+ D+ YF +LF+K E SP++YR Sbjct: 242 LETEMPVKIIAQSVGYSDAYYFSKLFKKYYEYSPNKYR 279 >UniRef50_UPI000178819A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178819A Length = 298 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 98/279 (35%), Gaps = 27/279 (9%) Query: 24 FASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDVLYVPAGGWNFPQWQAP 81 F S P L V GE G L GD+L + + + P Sbjct: 20 FVSYKNPWIHFKRNTHEHILYFVKSGELHMRENGESHVLRKGDMLVLEPHLDHEGTQKHP 79 Query: 82 ATTFSVLFGKQQLGFSVVQWDGKQY-----------------QNLAKQHVARRGPRIGSF 124 + + F + + + + + Sbjct: 80 CDYYYIHFEHPDIQQAPERPLSLLAKQWIMSENQPAGKDDGRPLYFPKTCTLTQRKSLHH 139 Query: 125 LLQTLNEMQMQPQEQ-----QTARLIVASLLSHCRDLLGSQIQTAS---RSQALFEAIRD 176 + L+EM + + TA + L+ R+ L +++ S +S A+ D Sbjct: 140 MYHALSEMLQLYRRKHFNRSLTALKFMEMLIELSRESLFDELEKNSPHTKSYMKVHALLD 199 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 YI E YA + + Q F + +Y++ +F K Y+N R+ HAK L++ L Sbjct: 200 YIHEHYAEKIISSDIEQRFECNYDYINRVFAKLTGHTIMRYVNQVRINHAKELIEATHLS 259 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQL 275 E+ + G D YF ++F+K SP++Y +Q + Sbjct: 260 FGEIGYLTGLDDPFYFSKVFKKYVGMSPNQYYKQVRDKE 298 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 100/255 (39%), Gaps = 20/255 (7%) Query: 34 LAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNFPQWQAP--ATTFSVLF 89 +A+ + L +VL GEF T GD++ + +G ++ + +T S++F Sbjct: 34 IAHWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVF 93 Query: 90 GKQQLGFSVVQWDGKQYQ------NLAKQHVARRGPRIGSFL-LQTLNEMQMQPQEQQTA 142 QL +++ + + + I + L LN + + Sbjct: 94 NMDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGF 153 Query: 143 RLIVASLLSHCRDLLGSQIQTASRSQAL---------FEAIRDYIDERYASALTRESVAQ 193 L + SL+ LL ++ + + +YI E Y + ++ Sbjct: 154 ELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSA 213 Query: 194 AFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFC 253 + + ++ F+K +++ + RLE A +L+ DL + E++ GF + +YF Sbjct: 214 ICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFI 273 Query: 254 RLFRKNTERSPSEYR 268 R F++ +P ++ Sbjct: 274 RSFKEKYNTTPKGFK 288 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 3/145 (2%) Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASA 185 + + E+ LL R + + S ++ + ++YI+ YA A Sbjct: 383 YRQVPELSDYHDSAVLFEQGKNHLLRIVRHVQAWR---NSHAKDMLYKAKEYIEAHYAEA 439 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 LT ES A+ +SP Y S LF+ + F +++ R+ AK LK L +KE+ ++ G Sbjct: 440 LTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIRKAKHFLKEGSLSLKEICYSIG 499 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQ 270 + D NYF R+F+K+T SP+EYR++ Sbjct: 500 YKDPNYFSRVFKKHTGLSPTEYRKE 524 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 1/187 (0%) Query: 88 LFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTL-NEMQMQPQEQQTARLIV 146 L + L +WD QY + + + P + + Q L + + Sbjct: 352 LVSPEHLMRWNSEWDWIQYHWTENEVKSTQEPVEDAEISQDLPSALPYSEDGMICWDRWR 411 Query: 147 ASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLF 206 + Q S+ + I Y+++ Y ++ + +A F++S Y+S F Sbjct: 412 EQISGRLYAASRVLTQIHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKF 471 Query: 207 QKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSE 266 ++ + +++L R+E AKTLL +++ ++A G+ D YF ++F+K +P+E Sbjct: 472 KQEFGVTLSDFLGRIRIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNE 531 Query: 267 YRRQYHS 273 YR+++ + Sbjct: 532 YRKKHMN 538 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 9/183 (4%) Query: 109 LAKQHVARRGPRIGSFLLQT-LNEMQMQPQEQQTARLIVASLLSHCRD--------LLGS 159 + G I L+ +E+ M+P Q+ ++ ++ L G Sbjct: 79 ILLSGYDLFGSEILQRALEMGADEILMKPSHQEDVIALIRRYMTFNEKENDKFDSMLDGI 138 Query: 160 QIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLN 219 + + + + ++ +YI+E Y + +T E VA+ +ISP YLS LF+K + F Y+ Sbjct: 139 TAKNSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVT 198 Query: 220 HTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKP 279 +++ AK LL+ DL V +A + + NYF ++F+K +PSEYR++ L++K Sbjct: 199 EKKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKK 258 Query: 280 TTP 282 Sbjct: 259 HNS 261 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%) Query: 54 TGAGATLVPGDV--LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAK 111 V ++ L + + + F V+ Q Sbjct: 285 KHQAVEAVKNEIMSLIISGDLQALHDYFEKVGGQAGSLQLTDGKFLVINHSLALDQISEV 344 Query: 112 QHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALF 171 + + LLQT++++ + + L Q A+ Sbjct: 345 LGLFSHQGKSAESLLQTIDQL----PGSMELKSWFKAACQDFETRLDRWKQQANPYVNSI 400 Query: 172 EAIRDYIDERY-ASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 + DYI+E Y S L+ + VA+ +++P+YLS LF+K F Y+N +L+ A+ LL Sbjct: 401 QQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVLL 460 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 + D+K+ E+ GF DS YF +F+K+ + SPSE+R+ + Sbjct: 461 RNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 17/267 (6%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLYVPAGGWNFPQW--QAP 81 S + + ++L G+ + G L G +++ + ++ + Sbjct: 31 SDYPTMAAANHWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSD 90 Query: 82 ATTFSVLFGKQQLGF-------SVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQM 134 +LF + ++ H R LL+ + E+ Sbjct: 91 CNFICILFPPSLISSITRIKETYILPVCEDTSNPFFILHPEITWQRNLIELLKNVYELCN 150 Query: 135 QPQE------QQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTR 188 + ++ I SL ++ +D + Q + + YI + Y +T Sbjct: 151 EEKDGFELHVMSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNYQKRITL 210 Query: 189 ESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVD 248 +A A + + +F+ YL RLE + LLK L V E+A CGF Sbjct: 211 NEIAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTG 270 Query: 249 SNYFCRLFRKNTERSPSEYRRQYHSQL 275 S+YF +F K +PS+YRR+ + L Sbjct: 271 SSYFTEIFHKTLGCTPSQYRRKKFNNL 297 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 105/283 (37%), Gaps = 12/283 (4%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEG-EFVDTGAGA-TLVP 62 V + +N + ++F P +L + G G L Sbjct: 16 VDDTVDLRVNSAGHYKLVHFPRFETTRPTGR---PDYQLLYIASGIAHFQKGETYVPLPA 72 Query: 63 GDVLYVPAGGWNFPQWQAP--ATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR 120 G + F + A + + + F ++ + W + R Sbjct: 73 GSAVLYHPNHTQFYYYSAEDSSEVYWIHFTGNRVSQYLSDWG----VPDNDFYNVGINSR 128 Query: 121 IGSFLLQTLNEMQMQPQ-EQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYID 179 SF ++E Q++ + + + + +L + + ++ Y+ Sbjct: 129 YISFFNHIIHEQQLKKENYMELCKYYLIQILILMNRGMKEASAPYNNHVSIINKTVTYLH 188 Query: 180 ERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKE 239 E Y ++ +A+ +++PN+ +H FQ+ + YL + R++ AK L Y L + + Sbjct: 189 EHYNEPISIIDLAKENHLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISD 248 Query: 240 VAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTP 282 VA G+ D+ YF R+F++ T SP +YR+ E +P Sbjct: 249 VALLTGYSDAFYFSRIFKRKTGLSPQQYRKNCMVFEEEHSYSP 291 >UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K3_PAESJ Length = 296 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 48 EGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQ 107 EG + + G G + + + +S +F + + W+ + + Sbjct: 62 EGIYERGTETLRIQAGQAFMTEIPGDHRYYFPPDGSHWSFIFVLIRPSLILPNWEEVK-K 120 Query: 108 NLAKQHVARRGPRIGSFLLQTLNEMQM-QPQEQQTARLIVASLLSHCRDLLGSQIQTASR 166 L G R L E + +E TA V +S + + A Sbjct: 121 QLGDTPFLPAGSRPIRLLQSMYEEAHAGRVKEPYTASSYVYQFISELCRFALAPQEDAKE 180 Query: 167 SQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHA 226 + YID Y + ++ + +A +S +L LF +T + N+YLN R++ A Sbjct: 181 WPLKVKEAVSYIDAHYENMISLDQLADQLSLSKYHLLRLFTRTVGMSPNDYLNQVRIKEA 240 Query: 227 KTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268 LLK D V+ +A G+ +YF + FRK T +P +R Sbjct: 241 IRLLKESDWSVERIAEQVGYSGGSYFIKWFRKITGETPGSFR 282 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 92/267 (34%), Gaps = 21/267 (7%) Query: 26 SSNGPVPDLAYQVDFPRLEIVLEGEFV--DTGAGATLVPGDVLYVPAGGWNF-PQWQAPA 82 + + + +F L V G G L G + + Sbjct: 85 KTKSHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRT 144 Query: 83 TTFSVLFGKQQLGFSVVQW--DGKQYQNLAKQHVARRGPRIGS-------------FLLQ 127 ++L K +++ D + + + ++ + Sbjct: 145 NLVNILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFK 204 Query: 128 TLNEMQMQ-PQEQQTARLIVASLLSHCRDLLGSQIQTASRSQAL-FEAIRDYIDERYASA 185 + E + P Q + + LL+ + R L + YI + Y A Sbjct: 205 IIEEYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIA 264 Query: 186 LTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACG 245 T +S A+ F+ +P+YLS K F+EYL +LE A LL L ++ VA G Sbjct: 265 -TLQSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTG 323 Query: 246 FVDSNYFCRLFRKNTERSPSEYRRQYH 272 + + + F + F+K + +P +YR Q Sbjct: 324 YSERSAFDKAFKKFSGLTPRQYRSQKQ 350 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 8/215 (3%) Query: 59 TLVPGDVLYVPAGGW--NFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR 116 T GD ++ G + + P + F + + + H Sbjct: 84 TAHAGDCFFLDCSGEYTHISTDEDPWELLWIHFNGPEARAYYTYFRDHHNWHFRSAHFTE 143 Query: 117 RGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRD 176 I S + NE + TA+ I+ L C + + + I Sbjct: 144 LINAIESIIR--YNEEPTDDTDLLTAQQIIHILTLICTE----SNEKNELLSDKLKTILH 197 Query: 177 YIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLK 236 Y+DE Y ++ + +A+ F+IS YLS F+K +Y+ R+ +AK LL+ + Sbjct: 198 YLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLAKRINNAKELLRYSNSS 257 Query: 237 VKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQY 271 ++E+AH CG D++YF ++FRK + SEYR+++ Sbjct: 258 IEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKRW 292 >UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A1A9 Length = 309 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 17/293 (5%) Query: 5 VSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVL--EGEFVDTGAGATLVP 62 ++ LSR+ LS+R Y+ + ++ F VL G +++ L P Sbjct: 19 LNRTLSRIEQQELSIRIHYWGFMPRHYDNTEHKHSFFEACYVLTGNGTYIEGEREFHLYP 78 Query: 63 GDVLYVPAGGWNFPQWQAPATTFSVLFGKQQ-----LGFSVVQWDGKQYQNLAKQHVARR 117 G + G + + + V F ++ + + KQ + + + Sbjct: 79 GTLFLSRPGVQHQIRSKDGLALCYVAFEPEETATGEFYAAAFRLLAKQGNPVVTEGARQA 138 Query: 118 GPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLG-------SQIQTASRSQAL 170 + LL + + Q + ASL+ + G S + ++ Sbjct: 139 SGLLWLSLLSLFHTGSGKQHPPQMLNSLAASLIVSFLTVHGPGFHHEPSGAEANDEGTSM 198 Query: 171 FEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLL 230 F +I + L+ E VA +I+ +L+ LF+K G F Y+ R++ AK +L Sbjct: 199 FHQAELFIKDNLNEPLSLERVAGHLHITTRHLTRLFRKYGHQSFVHYVQEQRVQQAKHML 258 Query: 231 KGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE 283 D ++KE+A CGF +YF R+F +P+ +R HSQ +E E Sbjct: 259 LHTDRQIKEIAVCCGFESVHYFTRVFTSKLGVTPARFR---HSQFSEGRYDSE 308 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 99/268 (36%), Gaps = 11/268 (4%) Query: 10 SRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE--FVDTGAGATLVPGDVLY 67 S + +SL Y + + IV +G+ F G L G Sbjct: 45 SYMWGTAISLDYCGREDCIKGWKFGPYVRESYVIHIVKKGKGVFTIGGKSYELEAGQAFI 104 Query: 68 VPAG--GWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFL 125 + G P + V F + + K+ + K + + + Sbjct: 105 IRPGEETIYKADDDDPWSYMWVGFHGYRAEDFIESMGYKKDSPIIK---IEQMDTCATCI 161 Query: 126 LQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASR----SQALFEAIRDYIDER 181 L Q+ + + + L + + S Q S+ +A D+I E+ Sbjct: 162 NNMLEYSQITRINEVKRQSALMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEK 221 Query: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Y + + + +A IS ++L+ F+K + EYL + RLE A +LL+ ++ +A Sbjct: 222 YMNKIKIDDIADFIGISRSHLTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIA 281 Query: 242 HACGFVDSNYFCRLFRKNTERSPSEYRR 269 + CG+ DS F + F++ SP +R Sbjct: 282 YQCGYEDSLSFSKAFKQKFGMSPKSFRN 309 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 9/171 (5%) Query: 110 AKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQA 169 G I + + ++ + + I++A Sbjct: 364 QNTSCRETGNGIQELICRIISMKSRHR---------IQDIAREYLASTAPLIESAKSRSP 414 Query: 170 LFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTL 229 + + YI E Y+ +T +S+A+ Y+ P YLS LF++ F EYL H R+E AK Sbjct: 415 VIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEMAKDY 474 Query: 230 LKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPT 280 L+ +L++ ++ G+ YF R+F++ T +P +R + + + Sbjct: 475 LRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFREELAGKGEKHEK 525 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.155 0.474 Lambda K H 0.267 0.0473 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,904,815,548 Number of Sequences: 3077464 Number of extensions: 113262977 Number of successful extensions: 358941 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 18839 Number of HSP's successfully gapped in prelim test: 2826 Number of HSP's that attempted gapping in prelim test: 307006 Number of HSP's gapped (non-prelim): 27230 length of query: 283 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 156 effective length of database: 649,558,428 effective search space: 101331114768 effective search space used: 101331114768 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 93 (40.2 bits)