27/01/2012 13:20:18 : INFO  : Run start: Fri Jan 27 13:20:16 GMT 2012
27/01/2012 13:20:24 : INFO  : Initialised job
27/01/2012 13:20:26 : INFO  : Renaming log file 'phyre2_20120127_132015.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/phyre_20120127_132015.log'
27/01/2012 13:20:28 : INFO  : Initialised job:
Sequence
>batch____
MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSS
INGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFS
IPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAI
RHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPP
VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNV
ISDILGAMANPLKHKEWYALR

27/01/2012 13:20:30 : INFO  : Checked sequence
27/01/2012 13:20:34 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 13:20:36 : INFO  : PSI-BLAST 3 iterations
27/01/2012 13:23:30 : INFO  : PSI-BLAST 5 iterations
27/01/2012 13:27:18 : INFO  : Finished PSI-BLAST
27/01/2012 13:27:22 : INFO  : Running Buildali to generate a3m file
27/01/2012 13:54:38 : INFO  : Converting to HMM
27/01/2012 13:54:44 : INFO  : Calibrating HMM
27/01/2012 13:55:07 : INFO  : Searching HMM database
27/01/2012 14:00:45 : INFO  : Finished buildali
27/01/2012 14:00:49 : INFO  : Predicting secondary structure
27/01/2012 14:01:06 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 14:01:10 : INFO  : Predicting Disordered regions
27/01/2012 14:01:19 : INFO  : Predicted Disorder (Disopred)
27/01/2012 14:01:23 : INFO  : Running memsat_svm check
27/01/2012 14:10:00 : INFO  : Globular protein
27/01/2012 14:10:02 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b0d73d6fd323235f'
27/01/2012 14:10:06 : INFO  : Initialising fold library search
27/01/2012 14:10:13 : INFO  : Initialised search input
27/01/2012 14:10:18 : INFO  : Building Ensemble models
27/01/2012 14:10:25 : INFO  : Building hh.d3dhwa1.model.1.pdb
27/01/2012 14:10:55 : INFO  : Building hh.c2onkC_.model.2.pdb
27/01/2012 14:11:22 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/hh.c2onkC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/c2onkC_.2.pdb
27/01/2012 14:11:31 : INFO  : Building hh.d2onkc1.model.3.pdb
27/01/2012 14:11:58 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/hh.d2onkc1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/d2onkc1.3.pdb
27/01/2012 14:12:08 : INFO  : Building hh.c3d31D_.model.4.pdb
27/01/2012 14:12:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/hh.c3d31D_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/c3d31D_.4.pdb
27/01/2012 14:12:44 : INFO  : Building hh.d3d31c1.model.5.pdb
27/01/2012 14:13:11 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/hh.d3d31c1.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b0d73d6fd323235f/d3d31c1.5.pdb
27/01/2012 14:13:20 : INFO  : Building d3dhwa1.1.pdb
27/01/2012 14:13:52 : INFO  : Building c2onkC_.2.pdb
27/01/2012 14:14:25 : INFO  : Building d2onkc1.3.pdb
27/01/2012 14:14:58 : INFO  : Building c3d31D_.4.pdb
27/01/2012 14:15:23 : INFO  : Building d3d31c1.5.pdb
27/01/2012 14:15:52 : INFO  : Building c3fh6F_.6.pdb
27/01/2012 14:16:21 : INFO  : Building d2r6gf2.7.pdb
27/01/2012 14:16:53 : INFO  : Building c2r6gF_.8.pdb
27/01/2012 14:17:25 : INFO  : Building d2r6gg1.9.pdb
27/01/2012 14:17:53 : INFO  : Building c1wz4A_.10.pdb
27/01/2012 14:18:21 : INFO  : Building c1ciiA_.11.pdb
27/01/2012 14:18:48 : INFO  : Building d1ntca_.12.pdb
27/01/2012 14:19:16 : INFO  : Building d1etob_.13.pdb
27/01/2012 14:19:45 : INFO  : Building c2ka2B_.14.pdb
27/01/2012 14:20:14 : INFO  : Building c2ka1A_.15.pdb
27/01/2012 14:20:43 : INFO  : Building c2ka1B_.16.pdb
27/01/2012 14:21:13 : INFO  : Building c2ka2A_.17.pdb
27/01/2012 14:21:43 : INFO  : Building d2auwa1.18.pdb
27/01/2012 14:22:13 : INFO  : Building c2cw1A_.19.pdb
27/01/2012 14:22:42 : INFO  : Building d2jrxa1.20.pdb
27/01/2012 14:25:55 : INFO  : Finished HH model building
27/01/2012 14:25:59 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 14:27:40 : INFO  : html domain output complete ID 'b0d73d6fd323235f'
27/01/2012 14:53:02 : INFO  : Run end  : Fri Jan 27 14:52:59 GMT 2012
