Phyre 2 alignment of P68398 with c1vddC_

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Job Description | P68398
Confidence | 4.62% | Date | Thu Jan 5 12:11:02 GMT 2012
Rank | 86 | Aligned Residues | 29
% Identity | 21% | Template | c1vddC_
PDB info | PDB header:recombination | Chain: C: PDB Molecule:recombination protein recr; | PDBTitle: crystal structure of recombinational repair protein recr
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | A | L | R | Q | G | G | L | V | M | Q | N | Y | R | L | I | D | A | T | L | Y | V | T | L | E | P | C | V | M | C | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | A | L | L | E | A | K | R | D | . | . | L | H | V | C | P | I | C | F | N | I | T | D | A | E | K | C | D | V | C | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | T | T | T |  |  |  |  | S | S | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . |  |  | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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