09/01/2012 17:25:11 : INFO  : Run start: Mon Jan  9 17:25:10 GMT 2012
09/01/2012 17:25:16 : INFO  : Initialised job
09/01/2012 17:25:18 : INFO  : Renaming log file 'phyre2_20120109_172509.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/b0836fb5cf88052e/phyre_20120109_172509.log'
09/01/2012 17:25:19 : INFO  : Initialised job:
Sequence
>batch____
MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEI
MALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDV
LHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD

09/01/2012 17:25:20 : INFO  : Checked sequence
09/01/2012 17:25:22 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 17:25:23 : INFO  : PSI-BLAST 3 iterations
09/01/2012 17:26:43 : INFO  : PSI-BLAST 5 iterations
09/01/2012 17:28:12 : INFO  : Finished PSI-BLAST
09/01/2012 17:28:14 : INFO  : Running Buildali to generate a3m file
09/01/2012 17:35:03 : INFO  : Converting to HMM
09/01/2012 17:35:05 : INFO  : Calibrating HMM
09/01/2012 17:35:15 : INFO  : Searching HMM database
09/01/2012 17:38:35 : INFO  : Finished buildali
09/01/2012 17:38:37 : INFO  : Predicting secondary structure
09/01/2012 17:38:45 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 17:38:46 : INFO  : Predicting Disordered regions
09/01/2012 17:38:50 : INFO  : Predicted Disorder (Disopred)
09/01/2012 17:38:52 : INFO  : Running memsat_svm check
09/01/2012 17:41:35 : INFO  : Globular protein
09/01/2012 17:41:37 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b0836fb5cf88052e'
09/01/2012 17:41:40 : INFO  : Initialising fold library search
09/01/2012 17:41:43 : INFO  : Initialised search input
09/01/2012 17:41:45 : INFO  : Building Ensemble models
09/01/2012 17:41:49 : INFO  : Building hh.d1z3aa1.model.1.pdb
09/01/2012 17:42:04 : INFO  : Building hh.c3ocqA_.model.2.pdb
09/01/2012 17:42:19 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/b0836fb5cf88052e/hh.c3ocqA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/b0836fb5cf88052e/c3ocqA_.4.pdb
09/01/2012 17:42:23 : INFO  : Building d1z3aa1.1.pdb
09/01/2012 17:42:38 : INFO  : Building c2nx8A_.2.pdb
09/01/2012 17:42:52 : INFO  : Building d2b3ja1.3.pdb
09/01/2012 17:43:07 : INFO  : Building c3ocqA_.4.pdb
09/01/2012 17:43:22 : INFO  : Building d1wwra1.5.pdb
09/01/2012 17:43:37 : INFO  : Building c2o7pA_.6.pdb
09/01/2012 17:43:53 : INFO  : Building c2d5nB_.7.pdb
09/01/2012 17:44:08 : INFO  : Building c2hxvA_.8.pdb
09/01/2012 17:44:22 : INFO  : Building d2g84a1.9.pdb
09/01/2012 17:44:37 : INFO  : Building c3dh1D_.10.pdb
09/01/2012 17:44:53 : INFO  : Building d2a8na1.11.pdb
09/01/2012 17:45:08 : INFO  : Building d1wkqa_.12.pdb
09/01/2012 17:45:22 : INFO  : Building d1p6oa_.13.pdb
09/01/2012 17:45:37 : INFO  : Building d2hxva2.14.pdb
09/01/2012 17:45:53 : INFO  : Building d2b3za2.15.pdb
09/01/2012 17:46:08 : INFO  : Building d1vq2a_.16.pdb
09/01/2012 17:46:24 : INFO  : Building c2hvwC_.17.pdb
09/01/2012 17:46:40 : INFO  : Building c2w4lC_.18.pdb
09/01/2012 17:46:55 : INFO  : Building d1uwza_.19.pdb
09/01/2012 17:47:10 : INFO  : Building d2d30a1.20.pdb
09/01/2012 17:47:54 : INFO  : Finished HH model building
09/01/2012 17:47:56 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 17:48:48 : INFO  : html domain output complete ID 'b0836fb5cf88052e'
09/01/2012 18:13:42 : INFO  : Run end  : Mon Jan  9 18:13:41 GMT 2012
