Phyre 2 Results for P68398

Email | l.a.kelley@imperial.ac.uk
Description | P68398
Date | Thu Jan 5 12:11:02 GMT 2012
Unique Job ID | b0836fb5cf88052e

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1z3aa1 |
|  | 100.0 | 100 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
2 | c2nx8A_ |
|  | 100.0 | 37 | PDB header:hydrolase Chain: A: PDB Molecule:trna-specific adenosine deaminase; PDBTitle: the crystal structure of the trna-specific adenosine deaminase from2 streptococcus pyogenes
3 | d2b3ja1 |
|  | 100.0 | 44 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
4 | c3ocqA_ |
|  | 100.0 | 92 | PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/adenosine deaminase; PDBTitle: crystal structure of trna-specific adenosine deaminase from salmonella2 enterica
5 | d1wwra1 |
|  | 100.0 | 41 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
6 | c2o7pA_ |
|  | 100.0 | 34 | PDB header:hydrolase, oxidoreductase Chain: A: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: the crystal structure of ribd from escherichia coli in complex with2 the oxidised nadp+ cofactor in the active site of the reductase3 domain
7 | c2d5nB_ |
|  | 100.0 | 38 | PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis
8 | c2hxvA_ |
|  | 100.0 | 34 | PDB header:biosynthetic protein Chain: A: PDB Molecule:diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5- PDBTitle: crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine2 deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828)3 from thermotoga maritima at 1.80 a resolution
9 | d2g84a1 |
|  | 100.0 | 31 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
10 | c3dh1D_ |
|  | 100.0 | 34 | PDB header:hydrolase Chain: D: PDB Molecule:trna-specific adenosine deaminase 2; PDBTitle: crystal structure of human trna-specific adenosine-34 deaminase2 subunit adat2
11 | d2a8na1 |
|  | 100.0 | 42 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
12 | d1wkqa_ |
|  | 100.0 | 29 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
13 | d1p6oa_ |
|  | 100.0 | 29 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
14 | d2hxva2 |
|  | 100.0 | 26 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
15 | d2b3za2 |
|  | 100.0 | 40 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
16 | d1vq2a_ |
|  | 100.0 | 27 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
17 | c2hvwC_ |
|  | 100.0 | 29 | PDB header:hydrolase Chain: C: PDB Molecule:deoxycytidylate deaminase; PDBTitle: crystal structure of dcmp deaminase from streptococcus2 mutans
18 | c2w4lC_ |
|  | 100.0 | 28 | PDB header:hydrolase Chain: C: PDB Molecule:deoxycytidylate deaminase; PDBTitle: human dcmp deaminase
19 | d1uwza_ |
|  | 98.3 | 16 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
20 | d2d30a1 |
|  | 98.3 | 17 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
21 | d1r5ta_ |
| not modelled | 98.2 | 18 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
22 | d1mq0a_ |
| not modelled | 98.2 | 17 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
23 | d2fr5a1 |
| not modelled | 98.2 | 18 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
24 | c3dmoD_ |
| not modelled | 98.2 | 22 | PDB header:hydrolase Chain: D: PDB Molecule:cytidine deaminase; PDBTitle: 1.6 a crystal structure of cytidine deaminase from2 burkholderia pseudomallei
25 | c3ijfX_ |
| not modelled | 98.1 | 17 | PDB header:hydrolase Chain: X: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium2 tuberculosis
26 | c3r2nC_ |
| not modelled | 98.0 | 15 | PDB header:hydrolase Chain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae
27 | c3b8fB_ |
| not modelled | 98.0 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:putative blasticidin s deaminase; PDBTitle: crystal structure of the cytidine deaminase from bacillus anthracis
28 | d1alna1 |
| not modelled | 97.8 | 23 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
29 | d2z3ga1 |
| not modelled | 97.8 | 13 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
30 | c3oj6C_ |
| not modelled | 97.7 | 10 | PDB header:hydrolase Chain: C: PDB Molecule:blasticidin-s deaminase; PDBTitle: crystal structure of blasticidin s deaminase from coccidioides immitis
31 | d1alna2 |
| not modelled | 97.6 | 15 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
32 | c1alnA_ |
| not modelled | 97.5 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase complexed with 3-deazacytidine
33 | c3g8qA_ |
| not modelled | 97.0 | 25 | PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea
34 | c2nytB_ |
| not modelled | 93.6 | 28 | PDB header:hydrolase Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; PDBTitle: the apobec2 crystal structure and functional implications2 for aid
35 | c2kboA_ |
| not modelled | 92.0 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:dna dc->du-editing enzyme apobec-3g; PDBTitle: structure, interaction, and real-time monitoring of the2 enzymatic reaction of wild type apobec3g
36 | c3gxgA_ |
| not modelled | 51.0 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase (duf442); PDBTitle: crystal structure of putative phosphatase (duf442) (yp_001181608.1)2 from shewanella putrefaciens cn-32 at 1.60 a resolution
37 | d1zbfa1 |
| not modelled | 49.7 | 21 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H
38 | c3e9jC_ |
| not modelled | 42.9 | 71 | PDB header:oxidoreductase Chain: C: PDB Molecule:thiol/disulfide oxidoreductase dsbb; PDBTitle: structure of the charge-transfer intermediate of the2 transmembrane redox catalyst dsbb
39 | d2hi7b1 |
| not modelled | 42.9 | 71 | Fold:Bromodomain-like Superfamily:DsbB-like Family:DsbB-like
40 | d2b0va1 |
| not modelled | 30.6 | 14 | Fold:Nudix Superfamily:Nudix Family:MutT-like
41 | c3dkuB_ |
| not modelled | 27.7 | 11 | PDB header:hydrolase Chain: B: PDB Molecule:putative phosphohydrolase; PDBTitle: crystal structure of nudix hydrolase orf153, ymfb, from2 escherichia coli k-1
42 | c3ggmB_ |
| not modelled | 24.8 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bt9727_2919; PDBTitle: crystal structure of bt9727_2919 from bacillus2 thuringiensis subsp. northeast structural genomics target3 bur228b
43 | c2lk2A_ |
| not modelled | 20.9 | 17 | PDB header:transcription Chain: A: PDB Molecule:homeobox protein tgif1; PDBTitle: solution nmr structure of homeobox domain (171-248) of human homeobox2 protein tgif1, northeast structural genomics consortium target3 hr4411b
44 | c3rh7A_ |
| not modelled | 15.7 | 32 | PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical oxidoreductase; PDBTitle: crystal structure of a hypothetical oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution
45 | c3o8sA_ |
| not modelled | 15.3 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:adp-ribose pyrophosphatase; PDBTitle: crystal structure of an adp-ribose pyrophosphatase (ssu98_1448) from2 streptococcus suis 89-1591 at 2.27 a resolution
46 | c3nznA_ |
| not modelled | 14.6 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: the crystal structure of the glutaredoxin from methanosarcina mazei2 go1
47 | c3q4iA_ |
| not modelled | 13.7 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:phosphohydrolase (mutt/nudix family protein); PDBTitle: crystal structure of cdp-chase in complex with gd3+
48 | c3d2oB_ |
| not modelled | 13.5 | 18 | PDB header:hydrolase, biosynthetic protein Chain: B: PDB Molecule:upf0343 protein ngo0387; PDBTitle: crystal structure of manganese-metallated gtp cyclohydrolase2 type ib
49 | d1j9ba_ |
| not modelled | 13.2 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like
50 | c2imrA_ |
| not modelled | 13.0 | 36 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dr_0824; PDBTitle: crystal structure of amidohydrolase dr_0824 from2 deinococcus radiodurans
51 | d1ttza_ |
| not modelled | 12.3 | 40 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
52 | d2fb5a1 |
| not modelled | 11.7 | 29 | Fold:YojJ-like Superfamily:YojJ-like Family:YojJ-like
53 | c3ld0Q_ |
| not modelled | 11.6 | 63 | PDB header:gene regulation Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa; PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions
54 | d1hr6a1 |
| not modelled | 11.4 | 13 | Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like
55 | c3ipzA_ |
| not modelled | 10.7 | 15 | PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic; PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp
56 | d1xdpa4 |
| not modelled | 10.6 | 16 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
57 | d2o8ra4 |
| not modelled | 10.4 | 16 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
58 | c4a1oB_ |
| not modelled | 9.7 | 21 | PDB header:transferase-hydrolase Chain: B: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of mycobacterium tuberculosis purh complexed with2 aicar and a novel nucleotide cfair, at 2.48 a resolution.
59 | c2oodA_ |
| not modelled | 9.7 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:blr3880 protein; PDBTitle: crystal structure of guanine deaminase from bradyrhizobium japonicum
60 | c2klxA_ |
| not modelled | 9.6 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston
61 | c2r5rA_ |
| not modelled | 9.3 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0343 protein ne1163; PDBTitle: the crystal structure of duf198 from nitrosomonas europaea2 atcc 19718
62 | d1zcza2 |
| not modelled | 9.0 | 16 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
63 | c2dmnA_ |
| not modelled | 8.4 | 17 | PDB header:transcription Chain: A: PDB Molecule:homeobox protein tgif2lx; PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein tgif2lx
64 | d1nuia2 |
| not modelled | 8.4 | 27 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:DNA primase zinc finger
65 | c2pq1B_ |
| not modelled | 8.0 | 29 | PDB header:hydrolase Chain: B: PDB Molecule:ap4a hydrolase; PDBTitle: crystal structure of ap4a hydrolase complexed with amp and2 atp (aq_158) from aquifex aeolicus vf5
66 | c2kq2A_ |
| not modelled | 7.6 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h-related protein; PDBTitle: solution nmr structure of the apo form of a ribonuclease h2 domain of protein dsy1790 from desulfitobacterium3 hafniense, northeast structural genomics target dhr1a
67 | d2drpa2 |
| not modelled | 7.2 | 60 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
68 | c2khpA_ |
| not modelled | 7.0 | 32 | PDB header:electron transport Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from brucella melitensis
69 | c3hstD_ |
| not modelled | 6.9 | 15 | PDB header:hydrolase Chain: D: PDB Molecule:protein rv2228c/mt2287; PDBTitle: n-terminal rnase h domain of rv2228c from mycobacterium tuberculosis2 as a fusion protein with maltose binding protein
70 | d1i1qb_ |
| not modelled | 6.8 | 29 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT)
71 | d2akla2 |
| not modelled | 6.4 | 56 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:PhnA zinc-binding domain
72 | c2bx9J_ |
| not modelled | 5.7 | 57 | PDB header:transcription regulation Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
73 | c2xzn5_ |
| not modelled | 5.7 | 70 | PDB header:ribosome Chain: 5: PDB Molecule:ribosomal protein s26e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
74 | d1vdda_ |
| not modelled | 5.5 | 21 | Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR
75 | d2r5yb1 |
| not modelled | 5.4 | 11 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
76 | d2baia1 |
| not modelled | 5.3 | 44 | Fold:Viral leader polypeptide zinc finger Superfamily:Viral leader polypeptide zinc finger Family:Viral leader polypeptide zinc finger
77 | d1k61a_ |
| not modelled | 5.3 | 15 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
78 | d1du6a_ |
| not modelled | 5.2 | 9 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
79 | c2o8rA_ |
| not modelled | 5.1 | 16 | PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis