116 c3sm3A_ Probab=98.42   E-value=1.4e-06  Score=60.04  Aligned_columns=118  Identities=15%

Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHHHCCCHHHHH
Q ss_conf             99999995047882599961568873379999999984432458759999988989998988069987897249989999
Q batch____       103 FPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQ  182 (286)
Q Consensus       103 f~~L~~~ilp~~~~irIWSAgCStGEEpYSLAill~e~~~~~~~~~~I~atDis~~~L~~Ar~G~Y~~~~~r~~~~~~~~  182 (286)
                      +..+++.+.|..   ||.-.||+||.-...+|          ..-.+++|+|+|+.+++.|++-.               
T Consensus         4 ~~~i~~~l~~~~---~VLDiGcG~G~~~~~l~----------~~~~~v~gvD~s~~~~~~a~~~~---------------   55 (212)
T c3sm3A_           4 YPIIHNYLQEDD---EILDIGCGSGKISLELA----------SKGYSVTGIDINSEAIRLAETAA---------------   55 (212)
T ss_dssp             CTTHHHHCCTTC---EEEEETCTTSHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHT---------------
T ss_pred             HHHHHHHCCCCC---EEEEECCCCCHHHHHHH----------HHCCEEEEEECCHHHHHHHHHHH---------------
T ss_conf             688999589997---89998779828999999----------70994999975946757888753---------------


Q ss_pred             HHHHCCCCCCCCEEEECHHHHCCCEEECCCCCCCCCCCCCCCEEEEECCCHHHC-CHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             740036777678389877898017020024555567876672089976124439-899999999999998289828998
Q batch____       183 RYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYF-DQTTQQEILRRFVPLLKPDGLLFA  260 (286)
Q Consensus       183 ryF~~~~~~~~~~~~v~~~ir~~v~F~~~NL~~~~~~~~~~~DlI~CRNVlIYF-~~~~~~~vl~~l~~~L~pgG~L~l  260 (286)
                                  .-...........................+|.+.|-+++.++ +.+...+++..+++.|+|||++++
T Consensus        56 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lkpgG~~~i  122 (212)
T c3sm3A_          56 ------------RSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL  122 (212)
T ss_dssp             ------------TCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ------------HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             ------------3310011122222222222222113356530245440420001024566678999840889728999