BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (750 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacter... 1542 0.0 UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, puta... 804 0.0 UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=... 763 0.0 UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 T... 594 e-168 UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacterac... 591 e-167 UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 586 e-165 UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protei... 579 e-163 UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 T... 573 e-162 UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 T... 572 e-161 UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 T... 566 e-159 UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobac... 555 e-156 UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 T... 554 e-156 UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 T... 553 e-156 UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogen... 547 e-154 UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 T... 538 e-151 UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 ... 536 e-150 UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH 535 e-150 UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bact... 529 e-148 UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 T... 525 e-147 UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus... 523 e-147 UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 ... 517 e-145 UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 T... 510 e-143 UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 T... 506 e-141 UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 T... 504 e-141 UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 ... 503 e-141 UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 ... 502 e-140 UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 T... 501 e-140 UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 T... 498 e-139 UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 T... 490 e-137 UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 T... 488 e-136 UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteri... 488 e-136 UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 T... 488 e-136 UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 T... 488 e-136 UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia i... 488 e-136 UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 T... 487 e-136 UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 T... 486 e-136 UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis ... 486 e-135 UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Ta... 484 e-135 UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legi... 483 e-135 UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophu... 483 e-135 UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 T... 483 e-134 UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 T... 478 e-133 UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 T... 478 e-133 UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 T... 475 e-132 UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 T... 471 e-131 UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 T... 471 e-131 UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobac... 468 e-130 UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 T... 466 e-129 UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legi... 466 e-129 UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 T... 466 e-129 UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 T... 465 e-129 UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collins... 465 e-129 UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory prot... 464 e-129 UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 T... 464 e-129 UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 T... 462 e-128 UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 T... 462 e-128 UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 T... 462 e-128 UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shew... 460 e-128 UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 T... 458 e-127 UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2... 458 e-127 UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 T... 457 e-127 UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein Hyp... 456 e-126 UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vi... 455 e-126 UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 455 e-126 UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncu... 454 e-126 UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Prot... 453 e-125 UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carb... 453 e-125 UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Meth... 452 e-125 UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales R... 451 e-125 UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 T... 451 e-125 UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemm... 451 e-125 UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 451 e-125 UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM 449 e-124 UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 ... 449 e-124 UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 T... 449 e-124 UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 T... 448 e-124 UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 T... 447 e-124 UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 T... 447 e-124 UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein Hyp... 446 e-123 UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clo... 446 e-123 UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 T... 446 e-123 UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Ta... 446 e-123 UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Stre... 446 e-123 UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 T... 445 e-123 UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfo... 442 e-122 UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria... 442 e-122 UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 T... 442 e-122 UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein Hyp... 442 e-122 UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 T... 441 e-122 UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 T... 441 e-122 UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosa... 441 e-122 UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 T... 441 e-122 UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 T... 437 e-121 UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridi... 437 e-121 UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Nept... 437 e-121 UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 T... 437 e-121 UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 T... 437 e-121 UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=... 437 e-121 UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Fran... 437 e-120 UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Eury... 437 e-120 UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 T... 436 e-120 UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyr... 433 e-119 UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 T... 432 e-119 UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 T... 432 e-119 UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protei... 431 e-119 UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 T... 430 e-119 UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=... 429 e-118 UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protei... 429 e-118 UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 T... 428 e-118 UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Phot... 428 e-118 UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulf... 427 e-118 UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostri... 426 e-117 UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=... 425 e-117 UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 T... 424 e-117 UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 T... 422 e-116 UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=... 422 e-116 UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 T... 421 e-116 UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 T... 420 e-116 UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein Hyp... 420 e-116 UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 ... 420 e-115 UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 T... 420 e-115 UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 T... 419 e-115 UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 T... 418 e-115 UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 T... 417 e-115 UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroida... 412 e-113 UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 T... 411 e-113 UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sora... 411 e-113 UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psyc... 409 e-112 UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 T... 409 e-112 UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST 408 e-112 UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 T... 408 e-112 UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alte... 406 e-111 UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitr... 404 e-111 UniRef50_O28905 Hydrogenase expression/formation regulatory prot... 401 e-110 UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Acti... 400 e-110 UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 T... 397 e-108 UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobac... 395 e-108 UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota ... 395 e-108 UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax... 394 e-108 UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 T... 394 e-108 UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 T... 393 e-107 UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 T... 392 e-107 UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 T... 390 e-106 UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Phot... 388 e-106 UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncu... 380 e-104 UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomy... 380 e-103 UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 T... 377 e-103 UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 T... 376 e-102 UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax... 375 e-102 UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protei... 375 e-102 UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 T... 372 e-101 UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alph... 367 e-100 UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 T... 367 e-99 UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 T... 365 3e-99 UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Heli... 364 7e-99 UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 T... 363 1e-98 UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 T... 360 2e-97 UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 T... 358 6e-97 UniRef50_UPI000197837F transcriptional regulatory protein HypF n... 353 1e-95 UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 T... 353 1e-95 UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 T... 353 2e-95 UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea R... 352 2e-95 UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 T... 352 3e-95 UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 T... 345 4e-93 UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=... 345 4e-93 UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 T... 342 3e-92 UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter ... 337 7e-91 UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phyma... 337 1e-90 UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n... 332 4e-89 UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 T... 307 9e-82 UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collins... 296 2e-78 UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 T... 274 8e-72 UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 T... 273 2e-71 UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 T... 264 8e-69 UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax... 258 9e-67 UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mari... 206 2e-51 UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=... 184 1e-44 UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomy... 177 1e-42 UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Bur... 149 4e-34 UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum ... 132 4e-29 UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Mag... 130 2e-28 UniRef50_C0AQL5 Putative uncharacterized protein n=1 Tax=Proteus... 114 2e-23 UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thau... 113 2e-23 UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=... 97 2e-18 UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina ... 91 1e-16 UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium ... 80 4e-13 UniRef50_C4V235 Putative uncharacterized protein (Fragment) n=1 ... 74 2e-11 UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synecho... 71 2e-10 UniRef50_A6Q3L8 Putative uncharacterized protein n=1 Tax=Nitrati... 67 2e-09 UniRef50_A6QAV0 Putative uncharacterized protein n=1 Tax=Sulfuro... 63 4e-08 UniRef50_Q8TXM7 Translation factor (SUA5) n=1 Tax=Methanopyrus k... 62 6e-08 UniRef50_A8MC09 Acylphosphatase n=1 Tax=Caldivirga maquilingensi... 59 6e-07 UniRef50_A8RF90 Putative uncharacterized protein n=2 Tax=Erysipe... 55 8e-06 UniRef50_Q3A498 Translation factor SUA5 n=6 Tax=Deltaproteobacte... 55 1e-05 UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacte... 55 1e-05 UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archa... 55 1e-05 UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macroco... 54 2e-05 UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinace... 53 3e-05 UniRef50_B9JMA7 Acylphosphatase protein n=1 Tax=Agrobacterium ra... 53 3e-05 UniRef50_Q3AQA5 Translation factor SUA5 n=12 Tax=Chlorobiaceae R... 53 5e-05 UniRef50_Q1MFT8 Acylphosphatase n=3 Tax=Rhizobium RepID=ACYP_RHIL3 51 1e-04 UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paeni... 51 2e-04 UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Br... 51 2e-04 UniRef50_D0MJN8 Acylphosphatase n=2 Tax=Rhodothermus marinus Rep... 50 3e-04 UniRef50_C9RL80 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fibro... 50 3e-04 UniRef50_D0N186 Putative uncharacterized protein n=1 Tax=Phytoph... 50 3e-04 UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC ... 50 4e-04 UniRef50_D1RB88 Putative uncharacterized protein n=1 Tax=Parachl... 50 4e-04 UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Rumin... 50 4e-04 UniRef50_C8NEC0 Acylphosphatase n=1 Tax=Granulicatella adiacens ... 50 4e-04 UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6... 50 4e-04 UniRef50_Q0VTD8 Putative ribosome maturation factor rimN n=3 Tax... 50 5e-04 UniRef50_A8F4E8 Acylphosphatase n=1 Tax=Thermotoga lettingae TMO... 49 5e-04 UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacte... 49 5e-04 UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firm... 49 5e-04 UniRef50_Q65UA8 Acylphosphatase n=4 Tax=Pasteurellaceae RepID=AC... 49 6e-04 UniRef50_Q2S263 SUA5 protein n=2 Tax=Rhodothermaceae RepID=Q2S26... 49 7e-04 UniRef50_A3EWE3 Putative acylphosphatase n=2 Tax=Leptospirillum ... 49 7e-04 UniRef50_UPI0000E87FE5 Putative translation factor n=1 Tax=Methy... 49 8e-04 UniRef50_Q73PK2 Acylphosphatase n=1 Tax=Treponema denticola RepI... 49 8e-04 UniRef50_C5VE15 Sua5/YciO/YrdC/YwlC family protein n=16 Tax=Acti... 49 9e-04 UniRef50_D2RP50 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acida... 49 0.001 UniRef50_Q08A23 Putative ribosome maturation factor rimN n=14 Ta... 49 0.001 UniRef50_C2ME81 Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Bacte... 48 0.001 UniRef50_A6P084 Putative uncharacterized protein n=1 Tax=Bactero... 48 0.001 UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3... 48 0.001 UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostri... 48 0.001 UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halot... 48 0.001 UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales... 48 0.002 UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clost... 48 0.002 UniRef50_B8FG73 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desul... 48 0.002 UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular ... 48 0.002 UniRef50_B4S388 Acylphosphatase n=1 Tax=Prosthecochloris aestuar... 47 0.002 UniRef50_C4XRP1 Acylphosphatase n=2 Tax=Desulfovibrio RepID=C4XR... 47 0.002 UniRef50_Q26EU1 SUA5/YciO/YrdC/YwlC domain protein n=1 Tax=Flavo... 47 0.003 UniRef50_C5NXQ4 SUA5 domain protein n=1 Tax=Gemella haemolysans ... 47 0.003 UniRef50_A7BDQ1 Putative uncharacterized protein n=1 Tax=Actinom... 47 0.003 UniRef50_A5GS00 Acylphosphatase n=2 Tax=Synechococcus RepID=ACYP... 47 0.003 UniRef50_UPI00015B545B PREDICTED: similar to conserved hypotheti... 47 0.003 UniRef50_A3CYL0 Putative ribosome maturation factor rimN n=9 Tax... 47 0.004 UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cell... 47 0.004 UniRef50_Q86U90 YrdC domain-containing protein, mitochondrial n=... 46 0.004 UniRef50_A4IG71 Zgc:162301 protein n=1 Tax=Danio rerio RepID=A4I... 46 0.004 UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Therm... 46 0.005 UniRef50_C8QXS3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desul... 46 0.006 UniRef50_O27727 Conserved protein n=1 Tax=Methanothermobacter th... 46 0.007 UniRef50_A2SSU7 Translation factor SUA5 n=5 Tax=Methanomicrobial... 45 0.007 UniRef50_Q2LR93 Sua5/yciO/yrdC/ywlC family protein n=1 Tax=Syntr... 45 0.007 UniRef50_B1L6Z2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Candi... 45 0.008 UniRef50_C1BLI9 Putative uncharacterized protein YWLC n=1 Tax=Os... 45 0.009 >UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacteriaceae RepID=HYPF_ECOLI Length = 750 Score = 1542 bits (3992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 750/750 (100%), Positives = 750/750 (100%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ Sbjct: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG Sbjct: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA Sbjct: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR Sbjct: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 Query: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM Sbjct: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD Sbjct: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 Query: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG Sbjct: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA Sbjct: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD Sbjct: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA Sbjct: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP Sbjct: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 Query: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP Sbjct: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 Query: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG Sbjct: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 >UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, putative n=65 Tax=Gammaproteobacteria RepID=C5B8Z2_EDWI9 Length = 774 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/755 (59%), Positives = 523/755 (69%), Gaps = 31/755 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGV--EVRLREDPETFLVQLYQHCP 66 + LRI+GKVQGVGFRP+VWQ+AQ L LHG+V ND GV VRL D +T + +LY CP Sbjct: 6 IALRIKGKVQGVGFRPYVWQIAQTLGLHGEVSNDAGGVWLVVRLPADLDTLIQRLYADCP 65 Query: 67 PLARIDSVEREPFIWSQLPTE-FTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PLA ID++ER P W++ P + F I S G M+TQIVPDAATCP CLAEM P RRY Sbjct: 66 PLAHIDTIERHP--WAETPADGFRIVDSRQGAMDTQIVPDAATCPRCLAEMRDPANRRYG 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCTHCGPRFTIIR MPYDRPFT MA FPLCPAC +EY DP DRRFHAQP AC CG Sbjct: 124 YPFINCTHCGPRFTIIRRMPYDRPFTAMADFPLCPACAREYHDPADRRFHAQPTACALCG 183 Query: 186 PHLEWVSHGEHA---EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 P + W + A E EAA QA L G IVA+KG+GGFHLACDA N A+A LR R Sbjct: 184 PTM-WSCGADGADRREGEAAWQAVTRSLDAGHIVAVKGLGGFHLACDAENDAAIARLRER 242 Query: 243 KHRPAKPLAVMLPVADGL-------PDAARQ-LLTTPAAPIVLVD-KKYVPELCDDIAPD 293 K RP KPLA+MLP L PDA Q LL++PAAPIVLV VP +AP Sbjct: 243 KRRPGKPLALMLPDLSWLARYCRAAPDAGLQALLSSPAAPIVLVPASDAVPA---QVAPG 299 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L+EVGVMLP PL HLL+ + PLVMTSGN SG+PPA+ N QALADL GIAD +L+HNR Sbjct: 300 LDEVGVMLPGTPLHHLLMAHIGRPLVMTSGNASGQPPALDNAQALADLAGIADLWLLHNR 359 Query: 354 DIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 DIVQR DDS+VR E EMLRR+RGYVPD +ALP F +P V +G DLKNTFCL++ Sbjct: 360 DIVQRADDSLVRYAPEGSEMLRRARGYVPDTIALPASFSMLPDVAAVGGDLKNTFCLLQR 419 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM---- 466 +A+LSQHLGDL + IQ Q+ + +L+ Y F+P+ + D HPGY S + A++ Sbjct: 420 GRALLSQHLGDLGEARIQQQFLQTWQLLLQTYQFSPRAIACDRHPGYHSHRLAQQQADVR 479 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 LP V HHHAH AAC+AEH +I L LDGIG GE+G LWGGECLRV+YR Sbjct: 480 GLPLIAVQHHHAHLAACMAEHGIAPQDTPLIGLALDGIGYGESGELWGGECLRVDYRGYT 539 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 LGGLPAVALPGGDLAA+QPWRNLLAQ L FVP+W Y ET +Q +NW +LARAI+R + Sbjct: 540 RLGGLPAVALPGGDLAARQPWRNLLAQLLCFVPDWPRYPETQRIQAKNWPLLARAIDREL 599 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N P ASSCGR FDA AAAL +S+EGEAAC LEA A PVT+ ++D Q + Sbjct: 600 NCPRASSCGRLFDAAAAALDICHEQISFEGEAACRLEAQAWQAWPQETPVTL-KIDEQGE 658 Query: 647 LAT--FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 LA FW+ WL+WQ V RA AFH A+A G AAL+R A G TLV SGGV+HNRLL Sbjct: 659 LAMGDFWRDWLSWQTSVPLRALAFHRAIADGLAALLRYHAEREGCQTLVLSGGVLHNRLL 718 Query: 705 RARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 R L LAD+ LL P+ LPAGDG L+LGQ +IAA Sbjct: 719 RQLLLARLADYRLLLPERLPAGDGALALGQAIIAA 753 >UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=Q65SA7_MANSM Length = 770 Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/766 (53%), Positives = 502/766 (65%), Gaps = 42/766 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE----DPETFLVQLYQH 64 ++LRI+GKVQGVGFRPFVW LA Q L GDV NDG GV +R E + FL L Sbjct: 9 IELRIKGKVQGVGFRPFVWLLANQYGLKGDVNNDGQGVLIRFIEPDCASLQQFLRDLQNK 68 Query: 65 CPPLARIDSVEREPFIWSQLP--TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLA+I ++ I LP ++FTIR+S ++TQIVPDAATCPACL E+ P R Sbjct: 69 LPPLAQITEIQETTKIGENLPHFSDFTIRESENNAVDTQIVPDAATCPACLKELFAPRNR 128 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ YPF NCTHCGPRFTII+++PYDRP T MA FP CP C++EY++P DRRFHAQP ACP Sbjct: 129 RFHYPFTNCTHCGPRFTIIKSIPYDRPNTSMANFPFCPECEREYKNPADRRFHAQPNACP 188 Query: 183 ECGPHLEWV--SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGPH+ W+ H + A+ EAAL + L GKI+AIKGIGGFHLACDA N V LR Sbjct: 189 VCGPHI-WLQNQHTKIADHEAALIQTLHLLNEGKIIAIKGIGGFHLACDATNRQTVQLLR 247 Query: 241 ARKHRPAKPLAVMLP---VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 +RK RP KPLA+M+P L A +LLT+ AAPIVL+ K VP + + IAP LNE+ Sbjct: 248 SRKRRPTKPLAIMVPDLQFLTALSRAETKLLTSSAAPIVLLSKHKVPAVDELIAPHLNEI 307 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVMLP+NPLQHLLL+ + PLVMTS N SG+PP + NE A+ LQ +AD +L HNRDI+Q Sbjct: 308 GVMLPSNPLQHLLLKAINKPLVMTSANPSGQPPVLDNESAVKFLQNLADFYLCHNRDILQ 367 Query: 358 RMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R DDS+VR + E LRR+RGYVPD ++L N +L LG+DLKNTFCL++ +AV Sbjct: 368 RADDSLVRIAFDGLETLRRARGYVPDEISL--NISNNKNILALGSDLKNTFCLLKRNKAV 425 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPT 470 +SQH+GD +D+ ++ Q E L L Q+IY F + D+H GY SS R++ +P Sbjct: 426 VSQHIGDTADEKVRSQLEENLALFQHIYQFKADLIAVDSHTGYFSSATGRQIAQCQQIPV 485 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 +LHHHAH A +AEH VI + LDGIGMGEN LWGGECL +N E +HLGG Sbjct: 486 MEILHHHAHIRAVMAEHNC---NEKVIGIALDGIGMGENQQLWGGECLLINRTEVKHLGG 542 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 LPAVALPGGDLAA QPWRN LA +FV WQ + S ++ NW L+RAIE+ IN P Sbjct: 543 LPAVALPGGDLAATQPWRNWLAHIHQFVENWQELA-AKSCEKYNWQSLSRAIEQKINCPT 601 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-----GVTHPVTMPRVDNQ- 644 SS GR FDAVA +L AP LS+EGEAAC LEALA V +P ++ Sbjct: 602 ISSAGRLFDAVAYSLNIAPENLSWEGEAACRLEALAGQSQFTEKSAVKIRQILPEFADEL 661 Query: 645 -----------LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 L+LA FWQ W N++A +A+AFH ALA GFA L R+QA T+V Sbjct: 662 IWTNDKNNKTFLNLAKFWQSWRNYKAQKADKAFAFHLALAAGFAELARQQANKYQCRTIV 721 Query: 694 FSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 SGGV+HNRLLR L L +F +L P GDGGLSLGQ IAA Sbjct: 722 LSGGVMHNRLLRRLLKENLQEFNVLSAHQFPMGDGGLSLGQAAIAA 767 >UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W4C2_9CYAN Length = 847 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 344/826 (41%), Positives = 471/826 (57%), Gaps = 95/826 (11%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++R+RG VQGVGFRP V++LA+ NL G+VCNDG GV + + E F+ +L CP Sbjct: 14 EIRVRGTVQGVGFRPTVYRLAKACNLVGEVCNDGQGVLIYVSGTTEAIADFVQRLQIDCP 73 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA+I+S++R P+ + +FTI QS T+ TQI PDAATCP C AE R Y Y Sbjct: 74 PLAKIESIDRTPYPGDRTFHDFTITQSVNSTVQTQIPPDAATCPQCQAETFDSRSRWYNY 133 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF NCTHCGPR +IIR++PYDR T MA F +CP C +EY +RRFHAQP+ACP CGP Sbjct: 134 PFTNCTHCGPRLSIIRSIPYDRKHTSMADFAMCPDCAREYLAIENRRFHAQPIACPVCGP 193 Query: 187 HLEWV--SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 + W+ ++GE + + LK G+IVAIKG+GG HLACDA N V LR+RK Sbjct: 194 KV-WLERANGEKMDTSDPIDTVCTLLKQGEIVAIKGLGGIHLACDATNETTVQQLRSRKQ 252 Query: 245 RPAKPLAVM---LPVAD---GLPDAARQLLTTPAAPIVLVD-------------KKYVPE 285 R KP A+M L V + L D ++L +P APIVL+D + + Sbjct: 253 RYHKPFALMARDLEVIEQYCTLNDQEKELFQSPPAPIVLIDVIPNRANCRDAPWRVSTAK 312 Query: 286 LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 + D +AP +G MLP PL HL++Q L P+++TSGNLS +P I N+ A L IA Sbjct: 313 IADSVAPGQTTLGFMLPYTPLHHLIMQRLDYPIILTSGNLSDEPQCIDNQDASLKLGKIA 372 Query: 346 DGFLIHNRDIVQRMDDSVVR-----------ESG-------------------------- 368 D L+HNRDIV R+DDSVVR + G Sbjct: 373 DYLLLHNRDIVNRVDDSVVRVIQSKRQLQNFDGGGFSHIRVTKNDNCETRPYRGTMARHI 432 Query: 369 --EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 + LRR+RGY P + LPPGF+ PP+L +G++LKNTFCL+R QA+LSQHLGDL + Sbjct: 433 HIQTLRRARGYAPKPINLPPGFEKCPPILAMGSELKNTFCLLRDGQAILSQHLGDLENAA 492 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAA 482 +++ L L N++D P + D HP Y+S++ +E+ +L + HHHAH AA Sbjct: 493 AFNAYQDTLNLYLNLFDHKPSAIATDKHPEYLSTKLGQELATANHLSLHPIQHHHAHIAA 552 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLA 542 CLAE+ PL+ ++ + LDG+G GE+G +WGGE L +Y+ + LG +A+ GG+ A Sbjct: 553 CLAENNIPLNTPPILGIALDGLGYGEDGTIWGGEFLLADYQGFKRLGKFKPIAMIGGEQA 612 Query: 543 AKQPWRNLLAQCLRFVPEW------QNYSETASVQ---QQNWSVLARAIERGINAPLASS 593 QPWRN A + W Q YS+ +Q Q+ +L + IE+GIN+PLASS Sbjct: 613 IYQPWRNTYAH---LIAAWDWNKLKQEYSDLDLIQFLDQKPHPLLNQLIEKGINSPLASS 669 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAA--SCHGVT----HPVTMPRVDNQ--- 644 GR FDAVAAALG A SYEG+AA +EAL S + V +P + ++D + Sbjct: 670 VGRLFDAVAAALGICRADCSYEGQAAIEMEALVTPDSLNYVKEVGAYPFNIGKLDQETEL 729 Query: 645 -LDLATFWQQWL-NWQAPVNQR--AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 LD W L + Q V++ A FH LA A ++++ ++ +GGV Sbjct: 730 ILDPYPLWLALLDDLQQDVSKSLIAAKFHQGLADAIATMVQQLRPDLISNQVILTGGVFQ 789 Query: 701 NRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 NR+L ++ L +L +P DGGLSLGQ VIAAA+ L+ Sbjct: 790 NRILLTQVRENLERMGMEVLTHSRVPPNDGGLSLGQAVIAAAQSLS 835 >UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacteraceae RepID=HYPF_RHOCA Length = 739 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 340/748 (45%), Positives = 441/748 (58%), Gaps = 33/748 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLA 69 ++R+RG+VQGVGFRPFVWQLA+ L G V ND +GV +R+ D F L PPLA Sbjct: 5 RIRVRGQVQGVGFRPFVWQLARARGLRGVVLNDAEGVLIRVAGDLGDFAAALRDQAPPLA 64 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 R+D+VE + LP F I S T++ PDAATCP CLAE+ G RR Y F Sbjct: 65 RVDAVEVTAAVCDDLPEGFQIAASGAAGAETRVTPDAATCPDCLAEIRGEGRRRG-YAFT 123 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 NCTHCGPRF+I++++PYDR T MA F +CPAC EY DP DRRFHAQP+ACP+CGP L Sbjct: 124 NCTHCGPRFSILQSLPYDRARTTMAPFAMCPACRAEYEDPADRRFHAQPIACPDCGPRL- 182 Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKP 249 W+ G A+ A A+LK G+I+A+KG+GGFHLACDA N++AV LRARK RPAKP Sbjct: 183 WLEAGGAELPGDAIGLAAARLKAGEILAVKGLGGFHLACDATNADAVDLLRARKRRPAKP 242 Query: 250 LAVMLPVAD-----GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 A+M D + AA L PAAPIVL+ + L + +AP + E+GVMLP Sbjct: 243 FALMAREEDLARIVAVSPAALAALRDPAAPIVLMPARG--SLPETLAPGMAELGVMLPYT 300 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 PL HLLL LVMTSGNLSG P I N++A L AD FL+H+R I +R+DDSVV Sbjct: 301 PLHHLLLDAFGGVLVMTSGNLSGAPQVIGNDEAREKLSAFADAFLMHDRAIARRLDDSVV 360 Query: 365 RESGEM-LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLS 423 R M LRR+RG VP L LPPGF+ P ++ G +K CL++ QA+L HLG+L Sbjct: 361 RVDPPMVLRRARGQVPGTLPLPPGFETAPQIVAYGGQMKAALCLIKTGQALLGHHLGELD 420 Query: 424 DDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAH 479 + + +A ++D PQ V D HP + +S+ A + +P V HHHAH Sbjct: 421 EALTWEAFLQADADYAALFDHRPQAVAVDLHPDFRASRHGAARAGRLGVPLIAVQHHHAH 480 Query: 480 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGG 539 AACL E+ WP DGG V + LDG+G+G +G +WGGE L +Y+ E + L L GG Sbjct: 481 LAACLGENLWPKDGGKVAVIVLDGLGLGPDGTVWGGELLLGDYKGFERVAWLKPAPLIGG 540 Query: 540 DLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIER-----GINAPLASSC 594 D A +PWRN L + + + + + + + R + R GINAPL+SS Sbjct: 541 DRAQIEPWRNALVRL--------DAAGLSDLADRLFPAAPRDLARQLAAKGINAPLSSSA 592 Query: 595 GRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV-TMPRVDNQLDLATFWQQ 653 GR FDAVAA LG P SYEGEAA LE+LAA T PV +P V +D A +Q Sbjct: 593 GRLFDAVAACLGICPMRQSYEGEAAMRLESLAAD----TGPVPDLPCVGGAIDPAPLFQL 648 Query: 654 WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 + P ++ A A H +LAQ FAA R + +GG N L ++LA Sbjct: 649 LAAGERP-DRVAHALHASLAQAFAAEARRLIEAGQAEAVALTGGCFQNSRLATMTRNFLA 707 Query: 714 DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 D +L +PA DGGL+LGQ ++AAA+ Sbjct: 708 DQGILTQGRIPANDGGLALGQALVAAAK 735 >UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5I7_9RHOB Length = 773 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 345/774 (44%), Positives = 450/774 (58%), Gaps = 43/774 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQL 61 T +RI+G VQGVGFRPFVW LA++ L G V ND DGV + + + FL +L Sbjct: 2 TVTATHVRIKGLVQGVGFRPFVWHLAREEGLTGHVLNDADGVLAEIFGAADRQQRFLERL 61 Query: 62 YQHCPPLARIDSVEREPFI--WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTP 119 PPL+ I SVE +S P +F I +S G T IVPDAATCPAC+A++ P Sbjct: 62 RCEAPPLSEIVSVETAVLAGPFSPPPQDFQIVESVEGPATTGIVPDAATCPACVADIFDP 121 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RR+ Y F NCTHCGPR +I+ ++PYDR T MAAF +CP C EY DP DRRFHAQP Sbjct: 122 ANRRHGYAFTNCTHCGPRLSIVTSIPYDRASTSMAAFKMCPECQSEYDDPADRRFHAQPN 181 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 ACP CGP L + G E ++ A ++L G+I+A+KG+GGFHLA DA N AVA L Sbjct: 182 ACPACGPQLWAEAEGTRIETADPIRWAASRLAAGEIIALKGLGGFHLAVDATNDAAVARL 241 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLV----DKKYVPELCDD 289 R +K RP KPLAVM+ + + D L+ AAPIVL+ P L Sbjct: 242 REKKKRPHKPLAVMVRDLEQARTICHVSDREAALMEDRAAPIVLLRLRAKSAEKPALSGH 301 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +AP L++ G+MLPA PL HLL+ + PLVMTSGN S P I+NE A +L IADGFL Sbjct: 302 LAPGLDQCGLMLPATPLHHLLIAAVPGPLVMTSGNRSEDPQVITNEDARRNLGQIADGFL 361 Query: 350 IHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 +H+R+IV R+DDSV+R +LRR+RG+ P LAL GF+ P VL +G +LK+TFC Sbjct: 362 MHDREIVNRLDDSVMRADRGGPVILRRARGHAPAPLALNNGFQTCPSVLAMGGELKSTFC 421 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-- 464 +R AV+SQH+GDL + + + L L + +YDF P + D HP +VS+Q R Sbjct: 422 QLRQASAVVSQHMGDLESRPVLEDYEKTLTLYRQLYDFEPDRIAVDLHPDFVSTQAGRRL 481 Query: 465 --EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 ++++P V HHHAH AAC+AEH P D V+ + LDG G+G +G +WGGE L Y Sbjct: 482 AADLHIPLIEVQHHHAHLAACMAEHGLPPDSDPVLGVVLDGSGLGSDGTIWGGEFLFGGY 541 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR--FVPEWQNYSETASVQQ----QNWS 576 + E G +ALPGG AA++PWRNL+A LR F +W S ++S+ + S Sbjct: 542 KGFERAGHFLPIALPGGAAAAREPWRNLVAH-LRAAFGTDWSPSSASSSLSPIFTGKTVS 600 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS--CHGVTH 634 V+ I+ G+N P+ASS GR FDAVAAALG SYEG+ LEALA + Sbjct: 601 VIEHLIDSGLNTPMASSAGRLFDAVAAALGICATRQSYEGQTGVLLEALARPYLSQATAY 660 Query: 635 PVTMPR-VDNQLDLATFWQQWLN----WQAP--VNQRAWAFHDALAQGFAALMREQATMR 687 PV + L W+ L AP ++ R FH L + + + A R Sbjct: 661 PVDISSGTPGMLSWEVMWEALLGDLKRGTAPGLISAR---FHLGLIKAISEMATHIAGDR 717 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 I T+ SGGV+ N +L L L+ F +L P LPA DGGLSLGQ IAA Sbjct: 718 NIRTIALSGGVLQNAILAGGLYEQLSAQGFDVLVPGKLPANDGGLSLGQAAIAA 771 >UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAG7_VIBHO Length = 794 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 342/798 (42%), Positives = 465/798 (58%), Gaps = 66/798 (8%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 G ++RIRG VQGVGFRP VW++A+ L+L G V NDG+GV V L E F+ L Sbjct: 3 GYRIRIRGVVQGVGFRPTVWRVARGLSLKGFVLNDGEGVIVALWCNYELASRFVEVLKHE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLA I SV + P +F I +S +N I DAA C C E P RR Sbjct: 63 QPPLASISSVHLQFAALGAPPDDFFIAESDDTAQINAGIPVDAAMCAECAEETLNPASRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCTHCGPR TII+A+PYDRP T MAAFPLCP C++EY++P DRRFHAQPVACP Sbjct: 123 YRYPFTNCTHCGPRLTIIKALPYDRPKTSMAAFPLCPQCEREYQNPADRRFHAQPVACPA 182 Query: 184 CGPHLEWVSHGEHAEQEA-------ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 CGP + W+ E E A+QAA+ ++ GKI+A+KG+GGFHL CDA N + V Sbjct: 183 CGPTV-WLCDAEGQEISPSKIGAIDAIQAAVHYIRQGKILAVKGLGGFHLVCDATNQDVV 241 Query: 237 ATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPE----- 285 TLR RK RP KP AVM+ A+ + AA ++L + ++P+V++ + V Sbjct: 242 DTLRRRKQRPDKPFAVMMKDAEQVGLYCQPSPAALEMLQSVSSPVVIMPTRNVTASLNTE 301 Query: 286 ----LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 + +AP+L E+G+MLPA P+ LL ++ PLVMTS NLSG P N +AL DL Sbjct: 302 GCGVIATAVAPNLGELGIMLPATPMHLLLCHDVALPLVMTSANLSGNPQCTDNREALEDL 361 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLG 398 +GIAD +++HNRDIV R DDSV R++ ++LRR+RG P + LPPGF+ +L +G Sbjct: 362 KGIADIWVLHNRDIVTRADDSVFRQTDQGLQILRRARGIAPSPIELPPGFEGTSSILAMG 421 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 ++KN FCL+ A++SQ++GDL + ++ L Q +Y FTP V D+HP Y+ Sbjct: 422 GEVKNAFCLLTSHGAIVSQYIGDLERVRVWEDFQRMLSHYQALYRFTPDRVAIDSHPEYL 481 Query: 459 SSQWAREM--NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE 516 +S++A+ + + + HHHAH AAC+ ++Q P+D +V+ + DG+G GENG LWGGE Sbjct: 482 ASKFAKSVYDDQIITEIQHHHAHVAACMGDNQLPIDHENVLGVVFDGLGYGENGTLWGGE 541 Query: 517 CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS----------- 565 L +Y + +G L VALPG A QPWRNL+ W +S Sbjct: 542 FLLADYHTFKRIGHLETVALPGASKAIVQPWRNLIV--------WLQHSGIDATDKRAVF 593 Query: 566 ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 E ++ S + I+ G+N+P +SS GR FDAV+A L SYEG+AA LE L Sbjct: 594 EALGIKPNVASTILSMIQTGLNSPNSSSVGRLFDAVSALLSVCIHEQSYEGQAAIELETL 653 Query: 626 AAS-CHGVT--HPVTMPR-VDNQLDLATFWQ----QWLNWQAPVNQRAWAFHDALAQGF- 676 AA+ VT +P T+ + +LD A WQ L++Q P A+ FH +LA+ Sbjct: 654 AATGASDVTDIYPFTIRDGLPARLDPAPMWQAIVRDVLSFQEP-GFIAYKFHVSLAKAIG 712 Query: 677 ---AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLS 731 A L + G+ +V SGGV NRLL L F +L Q +PA DGGL+ Sbjct: 713 DMVAHLCQHFHVSSGLPKIVLSGGVFQNRLLLKMTVKILNQQGFNVLNHQQVPANDGGLA 772 Query: 732 LGQGVIAAARWLAGEVQN 749 GQ +IAAA L+G Q+ Sbjct: 773 FGQALIAAAASLSGNKQS 790 >UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Acidithiobacillus RepID=B5EP19_ACIF5 Length = 803 Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust. Identities = 350/773 (45%), Positives = 449/773 (58%), Gaps = 42/773 (5%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLV 59 + + G ++R+RG VQGVGFRP VW++A+ L GDVCNDG+GV +R+ + + FL Sbjct: 7 RVATLGEEVRVRGLVQGVGFRPAVWRIARDCGLSGDVCNDGEGVLIRIWGPATERDRFLT 66 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTP 119 +L PPLARID V R F I S G ++T VPDAATCPACL E+ P Sbjct: 67 RLRDEHPPLARIDEVVRGSLREDPPEGPFGISTSRSGHVHTGAVPDAATCPACLGEIFDP 126 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRYRYPF NCTHCGPRF+I+ +PYDR T M FPLC C EY +P DRRFHAQPV Sbjct: 127 FHRRYRYPFTNCTHCGPRFSILEDIPYDRAHTSMGVFPLCRDCRAEYENPEDRRFHAQPV 186 Query: 180 ACPECGPHLEWVSHGEHA------EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AC CGP V HA Q A+ AA LK G+IV IKG+GGFHLACDA N Sbjct: 187 ACHACGPKARLVRLDGHAVSADRYTQLDAVDAATNLLKCGEIVLIKGLGGFHLACDATND 246 Query: 234 NAVATLRARKHRPAKPLAVM---LPVADGLPDAAR---QLLTTPAAPIVLVDKKYVPELC 287 AV+ LR RKHRP KPLA+M L V +R +LL + APIVL+++ L Sbjct: 247 RAVSGLRLRKHRPHKPLALMARDLEVVRRYAHVSRAEEKLLQSHQAPIVLLNRLDNDSLA 306 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 IAP + +G MLP PL HLL++ + P+V+TSGNLS P + A+ L+G+ D Sbjct: 307 PGIAPGMRRLGFMLPYTPLHHLLMRRMDRPIVLTSGNLSDAPQVTDDAAAVRALRGVTDW 366 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L H+R I+ R+DDSVV+ +G+ +LRR RGY P++L LP GF P +L LG +LKNT Sbjct: 367 MLTHDRAIINRVDDSVVQMAGDDTMILRRGRGYAPESLPLPAGFGASPDLLALGGELKNT 426 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 FCL++ QA+LSQH+GDL + L L ++ P+ VV D HP Y+S +W Sbjct: 427 FCLIKDGQAILSQHMGDLEQAAVWDDTVRNLALYARLFQHVPKAVVVDRHPEYLSRKWGV 486 Query: 465 EM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 EM +LP +V HHHAH AA +AEH PL+ VIAL LDG+G+G+ GA WG ECL+V Sbjct: 487 EMAEEGDLPLISVQHHHAHIAAVMAEHGLPLEHPPVIALALDGMGLGDGGAWWGCECLQV 546 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNL---LAQCLRFVPEWQNYSETASVQ---QQN 574 +YRE HLGGL ALPGG LA ++PWRN LA + Q +++ A V+ ++ Sbjct: 547 SYREVRHLGGLRPSALPGGGLAMREPWRNAFVQLADAFGWSVARQRFADLAIVEYLVEKP 606 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA-----LAASC 629 + L +R I PL SS GR FDAV+A G +S+EG+AA LEA + Sbjct: 607 VAQLLHMRDRNICTPLCSSAGRLFDAVSAVCGLCMDRVSHEGQAAMLLEACVDPSIMGDA 666 Query: 630 HGVTHPVTMPRVDN---QLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQ 683 +P + + Q+D T WQ L PV A FH A G A L+RE Sbjct: 667 SEPGYPFGIAESEKGFIQMDPRTLWQPLLGDLQGGVPVATVAARFHKGFAAGLAQLLREA 726 Query: 684 -ATMRGITTLVFSGGVIHN-RLLRA-RLAHYLADFTLLFPQSLPAGDGGLSLG 733 +T+ SGGV N LLRA R A +L P +PA DGGL+ G Sbjct: 727 LGATPWTSTVALSGGVFQNLTLLRATREALESQGLEVLIPHLIPANDGGLAFG 779 >UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGK3_RHOVA Length = 823 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 363/818 (44%), Positives = 458/818 (55%), Gaps = 90/818 (11%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 GV +R+RG VQGVGFRP VW++A++L L GDV ND +GV +R R + F+ L Sbjct: 9 GVSIRVRGLVQGVGFRPHVWRIARELWLTGDVLNDAEGVLIRAFGPRAALDAFIAALADR 68 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLAR++ +E P + P F I +S G + T IVPDAATCPACLA++ P RRY Sbjct: 69 APPLARVECIETAP-LNGPAPDMFRIVESGAGDVTTGIVPDAATCPACLADIRDPENRRY 127 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPF NCTHCGPR +I+RA+PYDR T MAAF +CPAC EY DP DRRFHAQP ACP C Sbjct: 128 RYPFTNCTHCGPRLSIVRAIPYDRATTSMAAFEMCPACRAEYEDPADRRFHAQPNACPVC 187 Query: 185 GPHLEWVSHGEHAE-----QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 GP L W+ + A ++AA A ++ G IVAIKGIGGFHLACDA N +AV L Sbjct: 188 GPRL-WLEGADGAALPLRGARDEIEAAAALIRDGAIVAIKGIGGFHLACDAANEDAVTRL 246 Query: 240 RARKHRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKY-VPELCDDIAP 292 RA K R KPLA+M + A R L + AAPIVL+ ++ P L IAP Sbjct: 247 RAGKRRSGKPLALMARNVAMVTRYAHIAPPERAALESAAAPIVLLSRRADAPPLASSIAP 306 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 +G MLP PL HLL++ L P+V+TSGN+S +P +I+N+ A L IAD FL+H+ Sbjct: 307 GQTTLGFMLPYTPLHHLLMEALPGPIVLTSGNVSDEPQSIANDDARERLSEIADAFLMHD 366 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDIV R+DDSVVR + +RR+RG A P F+ P VL +GA+LK+TFCL Sbjct: 367 RDIVNRLDDSVVRLAAGRVRTVRRARGLA-PAPLPLPLFQGAPAVLAMGAELKSTFCLAS 425 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G +A++SQH+GDL D R L L + ++ F P V DAHP Y +++ A E Sbjct: 426 GGRAIVSQHIGDLEDAATHADCRANLALYKRLFRFAPDVVAVDAHPDYHATRLGEALAAE 485 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN---------------- 509 LP VLHHHAH AA +AEH PLD V+ + DG+GMG++ Sbjct: 486 RGLPIARVLHHHAHVAAVMAEHGEPLDATPVLGIAFDGLGMGDDVPDQPALEAPHLSTGK 545 Query: 510 ----------------GALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ 553 LWGGE L +YR C + V L GG A ++PWRNLLA Sbjct: 546 LIDNKGERSDAFQRTHRPLWGGEFLVADYRACRRVASFAPVPLIGGAKAMREPWRNLLAH 605 Query: 554 CLRFVPEWQNYSETASVQQQNWSVLAR-----------AIERGINAPLASSCGRFFDAVA 602 L W + AS + + S+L R + RG+NAP ASS GR FDAVA Sbjct: 606 -LDVALGW----DEASARFGDLSILRRLAAKPVAPALQMMARGVNAPPASSAGRLFDAVA 660 Query: 603 AALGCAPATLSYEGEAACALEALAAS--CHGVTH-PVTMPRVDN----------QLDLAT 649 AALG +YEG+AA LEALAAS C P+ ++ + +L Sbjct: 661 AALGICFDEATYEGQAAVELEALAASVRCRDFGRWPIAARKLPSRGMGEDGGPIRLGWGE 720 Query: 650 FWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 WQ L+ AP A FH LA A R A G+ +V GGV HNRLL Sbjct: 721 LWQAVLDDLARDAPPAIVAARFHAFLADTVADTARALARRDGLRRIVLCGGVFHNRLLLE 780 Query: 707 RLAHYLA-DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + LA DF +L P PAGDG +SLGQ VIAAAR + Sbjct: 781 GVLERLAGDFEVLAPALCPAGDGAISLGQAVIAAARAI 818 >UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomonas intermedia K12 RepID=C7I132_THIIN Length = 787 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 351/762 (46%), Positives = 453/762 (59%), Gaps = 31/762 (4%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF---LVQLYQHCPPL 68 R+RG VQGVGFRP VW+LA+ L+L G V ND DGV + P+ +L HCPPL Sbjct: 21 RVRGVVQGVGFRPMVWRLARDLDLSGTVRNDADGVLIAAWGTPDALDALPARLRAHCPPL 80 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 ARID+++ P + P +FTI S GG T++ PDAA+CPACLA++N P +RR+R+ F Sbjct: 81 ARIDAIDVVPLAPGEAPDDFTIVPSQGGHAATEVTPDAASCPACLADVNNPADRRWRHAF 140 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 NCTHCGPR +I+ A+PYDR T MA F +CP C EY DP DRRFHAQP+ACP+CGP L Sbjct: 141 ANCTHCGPRLSIVSAVPYDRASTAMADFAMCPRCATEYADPADRRFHAQPIACPDCGPTL 200 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +GE + + A+ L+ G+I+AIKGIG FHL DA ++AVA LRARK RP K Sbjct: 201 WLEQNGERIVGD-PIATAVDLLRAGRILAIKGIGSFHLVVDATAADAVARLRARKRRPHK 259 Query: 249 PLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 PLA+M D L + L+ PAAP+VL++ L IAPD +G MLP Sbjct: 260 PLALMARDLDVVRRYAALTSDDERALSGPAAPVVLLEATEPHALPYAIAPDTRLLGFMLP 319 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +PL HLLL PLV TSGN SG PP I N +AL L IAD +L+H+R I+ R+DDS Sbjct: 320 MSPLHHLLLASFDTPLVFTSGNASGAPPCIDNAEALDRLDDIADAYLLHDRPILNRLDDS 379 Query: 363 VVRE-SGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 V+R +G + LRRSRGY P AL LP GF + P V LGA+LKNT CL+ G +A+LSQH Sbjct: 380 VLRRIAGTLQPLRRSRGYAPGALPLPHGFGDAPAVTALGAELKNTACLLAGGRAILSQHF 439 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLH 475 GDL + L + ++D P + D HPGY +++ RE+ L V H Sbjct: 440 GDLGGTSAAAEAARGLERLSQLFDHDPDIIAVDLHPGYHATRQGRELAARDGLGLAEVQH 499 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH AAC+A+H PL+G ++ L LDG+G+G++G LWGGE LRV+Y L L VA Sbjct: 500 HHAHIAACMADHGHPLNGPPILGLALDGLGLGDDGMLWGGELLRVDYTTSTRLASLRPVA 559 Query: 536 LPGGDLAAKQPWRNLLAQCL------RFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 LPGGD A++QPWRNL AQ L + + ++ + LAR + G +AP Sbjct: 560 LPGGDAASRQPWRNLAAQLLALPAASELLARHADLPAVRHLRGKPLDTLARMVSTGAHAP 619 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDN--QLD 646 LASS GR FDAVAAALG ++EG+AA LE+LA +S + + VD +LD Sbjct: 620 LASSTGRLFDAVAAALGLHAEAQTFEGQAAMTLESLATSSTDAGAYAFALTEVDGLLRLD 679 Query: 647 LATFWQQWL-NWQAPV--NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 A W L + Q V A F + L +A + A + SGGV N L Sbjct: 680 PAPLWPALLADLQRGVAPGTVARRFLNGLTAAWAEAIAAVAGNGPFAAIALSGGVFQNAL 739 Query: 704 LRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWL 743 + L L DF L + +PA DGGL+LGQ VIAAAR L Sbjct: 740 ISQLLHDRLCDFDLPVWMHRRVPANDGGLALGQAVIAAARAL 781 >UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobacteraceae RepID=A6E4D3_9RHOB Length = 737 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 337/740 (45%), Positives = 431/740 (58%), Gaps = 30/740 (4%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCP 66 G ++R+RG+VQGVGFRP++WQLA+Q+ L G V ND +GV + F+ + + P Sbjct: 4 GWRIRVRGQVQGVGFRPYIWQLARQMGLRGRVFNDPEGVLIEAAGAQLAAFVAAIPERAP 63 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LAR+D+V E ++ LP F I S G T++ PDAA+CP C+AE+ PG RR Y Sbjct: 64 VLARVDAVLHEVAVFD-LPEGFEIAPSRGVGAETRVTPDAASCPDCVAEVFAPG-RRQGY 121 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F NCTHCGPRFTI++ +PYDR T MAAFP+C AC EY DP DRRFHAQPVACPECGP Sbjct: 122 AFTNCTHCGPRFTILQGLPYDRARTTMAAFPMCAACRAEYEDPADRRFHAQPVACPECGP 181 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + W+ G A+ A+A L+ G +A+KG+GGFHLACDA + AVA LRARK RP Sbjct: 182 RV-WLEPG----GGDAVAGAVAVLRAGGSIAVKGLGGFHLACDAGSGEAVARLRARKRRP 236 Query: 247 AKPLAVMLPVAD-----GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 KP A+M +A + + LL PAAPIVL+ +K L D +AP +G ML Sbjct: 237 GKPFALMGTLAMIRAVCAVSEEEAALLRDPAAPIVLL-RKRAEVLPDVVAPGQAVLGWML 295 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P PL HLL+ E PLVMTSGNLSG+P I NE+A L G D FL+H+R I +R+DD Sbjct: 296 PYTPLHHLLIAEFGGPLVMTSGNLSGEPQVIGNEEAREKLGGFVDAFLMHDRVIARRLDD 355 Query: 362 SVVRESGEM-LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 SV R M LRR+RG VP L LP GF+ P VL G +K CLV+ QA+L HLG Sbjct: 356 SVERAHPPMVLRRARGRVPGTLPLPVGFEGAPQVLAYGGQMKAALCLVKSGQALLGHHLG 415 Query: 421 DLSDDGIQMQWREALRLMQN---IYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHH 477 +L + + W L + ++D P+ V D HPGY ++Q A +P V HHH Sbjct: 416 ELDE---ALTWEAFLAAEADYAALFDHRPEVVACDPHPGYRATQAAHARGVPVIEVQHHH 472 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALP 537 AH AAC+AE+ WPL G V + LDG+G+G +G +WGGE L +Y E G L VA+P Sbjct: 473 AHMAACMAENGWPLAAGRVAGIVLDGVGLGPDGTIWGGEVLLGDYLGFERRGWLTPVAMP 532 Query: 538 GGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 GGD A+++PWR LAQ + + +VL +AI G+NAPL SS GR Sbjct: 533 GGDRASREPWRVALAQ---LDAAGLGHLADELFGTRPLAVLRQAIRAGVNAPLTSSAGRL 589 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW 657 FDA AAALG A +YEGEAA LEA A +P+ V+ ++ A WQ W Sbjct: 590 FDAFAAALGFEGAQ-TYEGEAAMGLEARAVLGDVGAYPLG--GVEGVIETAPLWQAWAQD 646 Query: 658 QAPV---NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD 714 +A A F LA+GFAA R + SGG N LL L D Sbjct: 647 RAAGVAPEVMAGRFQAGLARGFAARARALIASGEAQAVALSGGCFQNALLLDLTLAALGD 706 Query: 715 FTLLFPQSLPAGDGGLSLGQ 734 +L + PA DGGL+LGQ Sbjct: 707 VPVLIHRGTPANDGGLALGQ 726 >UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Rhizobiales RepID=Q20XQ9_RHOPB Length = 785 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 350/773 (45%), Positives = 441/773 (57%), Gaps = 54/773 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLY 62 S G ++R+RG VQGVGFRPFV LAQ+L L G V ND +GV + + R E + + Sbjct: 13 SVGERIRVRGLVQGVGFRPFVHALAQRLALLGSVHNDSEGVLIHVAGERAAIEALVAAIS 72 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNTP 119 P LA + ++ER P+ F I S GG +VPDA C AC AE++TP Sbjct: 73 DEAPALAHVVTIERAPWSAPSGLVTFAIASSPAEHGGRNTAGVVPDARICAACAAEIDTP 132 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 GERRYRY F +CT CGPRF+II A+PYDRP T M F LC C EY P DRRFHAQP+ Sbjct: 133 GERRYRYAFASCTACGPRFSIIDAIPYDRPNTTMRDFALCAPCRSEYDSPADRRFHAQPI 192 Query: 180 ACPECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 ACP+CGP L W+ + G + L AA+ L+ GKI+A+KG+GGFHLACDA + AV Sbjct: 193 ACPDCGPQL-WLENAAGARVAADDPLTAAVDALRQGKILALKGLGGFHLACDAGSEAAVD 251 Query: 238 TLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIA 291 LRARK RPAKP A+M + + R LL +PAAPIVL+ ++ L +A Sbjct: 252 ALRARKRRPAKPFALMAADLEAIRRFCRADAQEAALLLSPAAPIVLLPWRHHEGLAAAVA 311 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P+ + +G MLP PL HLLL E LVMTSGN+SG+P I N A L G AD FL+H Sbjct: 312 PNQSLLGFMLPTTPLHHLLLNEFGGALVMTSGNVSGEPQVIDNADAQRKLGGFADCFLMH 371 Query: 352 NRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 +R I +R+DDSV R G +LR +RGY P LPPGF PPVL LG ++K CL Sbjct: 372 DRRIARRLDDSVARVVGGETRLLRHARGYAPAPRTLPPGFAAAPPVLALGGEMKGAICLT 431 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQN---IYDFTPQYVVHDAHPGYVSSQWAR- 464 R ++A+LS HLGDL + + +RE +R + + ++D P + D HP Y SS WA Sbjct: 432 RNDEALLSHHLGDLEE---PLTYREFVRAIDDYAQLFDHRPSLLAADLHPAYRSSAWAEQ 488 Query: 465 ---EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 E LP V HHHAH A+ +AE WP DGG V+ + LDGIG G +G +WGGE L + Sbjct: 489 AAAERALPLARVQHHHAHIASAMAERGWPRDGGRVVGIALDGIGYGSDGTVWGGEILLCD 548 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ------------CLRFVPEWQNYSETAS 569 Y + + L V LPGG A QPWRNLLAQ CL +P A Sbjct: 549 YMDFTRMAHLKPVPLPGGARAVTQPWRNLLAQLDAAFGTEGTAACLPALP------GGAI 602 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL---A 626 + Q VL +A+ RGIN+P +SSCGR FDAVAAAL APA LS+EGEAA ALEAL + Sbjct: 603 LAAQQLGVLRQAMARGINSPPSSSCGRLFDAVAAALALAPAQLSFEGEAAMALEALASGS 662 Query: 627 ASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQ 683 A G + +D A W+ L+ A P+ A FH LA F + Sbjct: 663 ADTRGYPFALDTATTPWSIDPAPMWRALLDDLAAGVPIAAIAARFHFGLADAFCDCALKI 722 Query: 684 ATMRGITTLVFSGGVIHNR-LLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQ 734 A + GGV N LL+A LA A +L P +PA DGGL+ GQ Sbjct: 723 AKANDAQAIALGGGVFQNGLLLQACLARLSASSLPVLSPAQIPANDGGLAYGQ 775 >UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 Tax=Nostocaceae RepID=UPI0001C1650F Length = 803 Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust. Identities = 319/794 (40%), Positives = 436/794 (54%), Gaps = 65/794 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 Q+R+RG VQGVGFRP V++LA+ L GDVCNDGDGV +R+ E F+ QLY CP Sbjct: 5 QIRVRGTVQGVGFRPTVYRLAKNAGLKGDVCNDGDGVLIRIVGSEEKITAFVQQLYDQCP 64 Query: 67 PLARIDSVEREPFIWSQ-----LPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 PLA I + R P S EF I S + T+I PDAATC C E+ P Sbjct: 65 PLAHIHELIRSPLYGSNDFHTDELIEFIIAPSMETPVKTEIAPDAATCGECQQEIFDPFS 124 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 R +RYPF NCTHCGPR +I++A+PYDR T M FP+C C++EY D +RRFHAQPVAC Sbjct: 125 RYFRYPFTNCTHCGPRLSIMQAIPYDRNNTSMVDFPMCGECNREYEDVNNRRFHAQPVAC 184 Query: 182 PECGPHLEWVSH-------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP W+ G+ + A L+ G+IVAIKG+GGFHLACDA Sbjct: 185 FRCGPR-AWLERADGQPISGDMFSMLDEVDAVCTLLQKGEIVAIKGLGGFHLACDATQET 243 Query: 235 AVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVD---KKYVPE 285 V LR RK R KP A+M + + D + LLT+PAAPIVL+ + +P Sbjct: 244 VVEKLRQRKKRYHKPFALMARDINIISQYCQISDLEKDLLTSPAAPIVLLKINPQNNLPH 303 Query: 286 ----------LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE 335 + IAP N +G MLP PL HL+L+ ++ P+V+TSGN++ +P I N Sbjct: 304 NSIKSQIGNPIARAIAPGQNTLGFMLPYTPLHHLILRRMKVPIVLTSGNIADEPQCIDNS 363 Query: 336 QAL-ADLQGIADGFLIHNRDIVQ---RMDDSVVRESGEMLRRSRGYVPDALALPPGFKNV 391 + L IAD FL HNRDI+ VV + ++LRR+RGY P + LPPGF+ Sbjct: 364 DDIKKKLVSIADLFLFHNRDIINRVDDSVVRVVNQKVQILRRARGYAPAPIILPPGFEKT 423 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 PP+L +G +LKNTFCL+R +A+LS+HLGDL + ++E L L N++ P + Sbjct: 424 PPILAMGGELKNTFCLLRSGEAILSEHLGDLENPSAFTNYQETLNLYLNLFAHKPAIIAI 483 Query: 452 DAHPGYVSSQWAREMNLPTQTVL----HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP Y+SS+ R++ + + L HHHAH AACL E++ PL+ V+ + DG+G G Sbjct: 484 DKHPEYLSSKLGRQLAVNNEIELHEIPHHHAHIAACLGENKIPLNSQPVLGVAFDGLGYG 543 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE- 566 E+ WGGE L +Y C+ L V + GG + QPWRN A L WQ E Sbjct: 544 EDSTFWGGEFLLADYSNCQRLATFKPVPMIGGKQSIYQPWRNTYAH-LNSALNWQEVQEQ 602 Query: 567 ------TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAAC 620 +QQQ +L + +E+ IN+PL SS GR FDAVAAA+G +YEG+AA Sbjct: 603 YPSLEIVQFLQQQPLKLLDQMVEKNINSPLVSSVGRLFDAVAAAIGICREECTYEGQAAI 662 Query: 621 ALEALAASCHGVTHPVTMPRVDN--QLD------LATFWQ---QWLNWQAPVNQRAWAFH 669 +E+ + S + + P N +LD A W+ + +N Q + + A FH Sbjct: 663 EMES-SISTEILNDISSYPSHQNIEKLDGMYYIHTAPIWKGILEDINQQVGMGEIAAKFH 721 Query: 670 DALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGD 727 LA ++ + + +GGV NR+L + L + + L ++P D Sbjct: 722 LTLANLIIETVKLLSREYKTNQVALTGGVFQNRILLQQTTKLLQNMGMEVLTHSNVPPND 781 Query: 728 GGLSLGQGVIAAAR 741 GG+SLGQ +I AAR Sbjct: 782 GGISLGQAMIMAAR 795 >UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogenase maturation protein n=12 Tax=Bacteria RepID=A5E9B2_BRASB Length = 824 Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust. Identities = 328/789 (41%), Positives = 450/789 (57%), Gaps = 54/789 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 VQ+R+RG+VQGVGFRP VW+ A+++ L G+V NDG+GV +R R +D ET + +L Sbjct: 21 VQIRVRGRVQGVGFRPTVWRHAREVGLDGEVLNDGEGVLIRARGQGKDIETLVRRLRDEA 80 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 P LA I+++E EPF +L F I +S T+I PDAA CPAC AE+ P ERR+R Sbjct: 81 PLLAAIEAIEVEPFT-GRLAPGFRIIESNRSEARTEISPDAAICPACAAEVLDPFERRFR 139 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y F NCTHCGPRFTIIR++PYDR T MAAFP+C C EY DP +RRFHA+P+AC CG Sbjct: 140 YAFTNCTHCGPRFTIIRSIPYDRSATTMAAFPVCAECAAEYGDPANRRFHAEPIACHACG 199 Query: 186 PHLEWVSHGEHA---EQEAA---LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P + V A EQ + + AA++ ++ G+IVA+K +GG+ LACDA + V L Sbjct: 200 PKAQLVRFDGRALTYEQHSMFDDVDAAMSLIQKGEIVAVKALGGYQLACDATRLDTVERL 259 Query: 240 RARKHRPAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 R K R KP A+M D + PD + L +PAAPIVL+D L + +AP Sbjct: 260 RLLKRREVKPFALMARDLDVIRRFCAVSPD-EEEALCSPAAPIVLLDAAGPERLPEAVAP 318 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +G MLP+ PL L+ + + P++MTSGNLS +P AI + +A L I L+H+ Sbjct: 319 GMRMLGFMLPSTPLHVLMFRRMPRPVIMTSGNLSDEPQAIGDAEAARKLGTITPYALVHD 378 Query: 353 RDIVQRMDDSVVR-ESGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I R+DDSV+R G M LRR+RGY P +++LP GF++ P +L G ++K TFCLV+ Sbjct: 379 REIANRVDDSVMRVMDGRMRLLRRARGYAPASISLPKGFEDSPDILAYGPEMKATFCLVK 438 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----E 465 +AVLSQH GDL D +R+ L L ++++ PQ + D HP Y+S++ AR E Sbjct: 439 EGRAVLSQHQGDLQDAATWDDYRKNLALFRDLFAHDPQALACDMHPEYLSAKLARKRASE 498 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +L V HHHAH AACL E+ LD V+ + LDG+G G + +WGGE L +YR Sbjct: 499 DSLALIEVQHHHAHIAACLTENARALDAPRVLGIALDGLGYGTDDTIWGGEFLLCDYRGF 558 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCL------RFVPEWQNYSETASVQQQNWSVLA 579 + +G VA+ GG A+++PWRNL A F ++ + + +VL Sbjct: 559 QRVGTFRPVAMVGGAAASREPWRNLYAHLTAQMGWAAFAMNFRQLPLFERLAAKPRAVLD 618 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA------LAASCHGVT 633 I IN+PLASSCGR FDAVAAAL +YEGEAA LEA LA + Sbjct: 619 TMIHDHINSPLASSCGRLFDAVAAALDVCFERQAYEGEAAARLEAIACPKTLAEEDDSLC 678 Query: 634 HPVTMPRVDNQ----LDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALM------ 680 +P+ +P + ++ W L P A FH ALA+ + Sbjct: 679 YPMPIPVLKGSGLPYIEPLAMWNAILGDLILGTPQPIIAARFHKALARSIVTMAIQLARR 738 Query: 681 -REQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVI 737 E A R T+ SGG NR+L + L + F +L +PA DGG++LGQ I Sbjct: 739 DDEDAQPR-FDTVALSGGCFQNRILLEQTVRRLEEKKFKVLTHAKVPANDGGVALGQATI 797 Query: 738 AAARWLAGE 746 AAA + E Sbjct: 798 AAAHLIDAE 806 >UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Thermoanaerobacterales RepID=B7R9R7_9THEO Length = 751 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 303/752 (40%), Positives = 428/752 (56%), Gaps = 42/752 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 Q+ I G VQGVGFRPFV+ +AQ+ NL G V N+ G+ + + +D E F+ ++ ++ P Sbjct: 13 QINIFGIVQGVGFRPFVFNIAQKYNLKGIVYNNSSGLYIEVEGEEKDIEAFIREIKENPP 72 Query: 67 PLARIDSVE-REPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 L+ ID ++ RE + + + GG + + PD C CL E+ P +RRYR Sbjct: 73 SLSVIDEIQVREVEVKEYKDFKIVGSKEDGGFV--PVSPDMGVCEDCLRELKDPKDRRYR 130 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPRF+II +PYDR T M FP+C C +EY DP DRRFHAQPVAC +CG Sbjct: 131 YPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFDCG 190 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P L +V G ++ ++ LK GKIVAIKGIGGFHLA +A + AVATLR RK R Sbjct: 191 PSLSFVGEGCFDDE---IKCVAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRRRKKR 247 Query: 246 PAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 KP AVM+ + + P+ R LL + PIVL+ KK +L IA DL+ +G Sbjct: 248 YGKPFAVMMRDVEEVKKYCIVSPEEER-LLLSQRRPIVLLKKK-GEKLAKGIADDLDTLG 305 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 VMLP P+ +LL++E+ P+VMTSGN+S +P NE+AL L+ IAD FL++NRDIV R Sbjct: 306 VMLPYAPIHYLLMEEIDFPIVMTSGNVSEEPICKDNEEALEKLKDIADVFLLNNRDIVNR 365 Query: 359 MDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DDSV + ++RR+RGY P + L K +L +G KNTFC+ +G A + Sbjct: 366 IDDSVTSFNAGAERIIRRARGYAPQPILLKKEVK--ASILAVGGFYKNTFCMTKGHYAFI 423 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLH 475 S H+GDL ++ + E + + ++ P+ V HD H GY+S+Q+A+ ++LP V H Sbjct: 424 SHHIGDLDNEKAFNYYIEQIERYKKLFRVDPEVVAHDMHKGYLSTQYAKSLDLPKIEVQH 483 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH A+C+AEH LD VI + DG G G +G +WG E L + + E + L Sbjct: 484 HHAHIASCMAEHN--LD-EKVIGIAYDGTGYGTDGNVWGAEILVCDLKSFERIAHLKYKP 540 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 LPG +LA K+ +R L + ++N+ E V + ++ + I+R IN SS G Sbjct: 541 LPGNELAIKKIYRTALGFIFDNISFYKNFVE--QVDSRELDIILKQIDRKINTAYVSSMG 598 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR----VDNQLDLATFW 651 RFFDAVAA +G L +EG+AA LE+L A + +D +L L + Sbjct: 599 RFFDAVAALIGVRKEVL-FEGQAAMELESLMAESEEYYEYEILKEDGYVIDPELILRQIY 657 Query: 652 QQWLNWQAPVNQRAWAFHDALAQ---GFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 + ++ A FH+ + A L+R++ GI +V SGG NR L RL Sbjct: 658 EDYMKGFEKSYISA-KFHNTVVNFTYDLANLIRKET---GINKVVLSGGSFQNRYLLRRL 713 Query: 709 AHY--LADFTLLFPQSLPAGDGGLSLGQGVIA 738 L+ F + +P DGG+SLGQ VIA Sbjct: 714 IEKLSLSGFEVYSNSKVPCNDGGISLGQAVIA 745 >UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 Tax=Desulfotalea psychrophila RepID=Q6AQR7_DESPS Length = 782 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 305/782 (39%), Positives = 425/782 (54%), Gaps = 46/782 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 GV++ IRG VQGVGFRPF++ LA+Q L G VCN GDGV + +E+ E F+ + Sbjct: 3 GVEIFIRGTVQGVGFRPFIYNLARQHGLSGTVCNTGDGVAIHTSCSKEELEAFIGAVRSK 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 PPL+RI S+E P FTI +S+G + + I PD A C CL+EM P + R Sbjct: 63 APPLSRIQSIEHGPKEIEIEDGRFTISKSSGTSSADASIPPDIALCADCLSEMQDPNDPR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YPFINCT+CGPRFTI+ +PYDR T M FP+C AC ++Y DP +RRFHAQP ACP Sbjct: 123 FAYPFINCTNCGPRFTIVEKIPYDRQQTSMKVFPMCEACTRDYEDPGNRRFHAQPNACPL 182 Query: 184 CGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + W G E ++ L L K+VAI+G+GGFHL+C+A AVA LR R Sbjct: 183 CGPQVSWHDQAGNKIETKSPLTDTAVALAANKLVAIRGLGGFHLSCNALEEKAVAQLRER 242 Query: 243 KHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP KPLA+M+ D + + LL++ PIVL+ K+ +L +AP + E Sbjct: 243 KRRPHKPLAIMVQSIDIAKKYCFISEQEIALLSSIEHPIVLLQKRPDTDLAQGLAPHITE 302 Query: 297 VGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 +G+ML PL HLL QE CP LVMTSGN SG P N +A+ L I D FL+HNRD Sbjct: 303 LGIMLAYTPLHHLLFQESTCPQALVMTSGNSSGTPICTGNAEAIDRLGPIVDNFLLHNRD 362 Query: 355 IVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV R+DDSV R SG+ +LRR+RGYVP + +P + G LK+TFCL + Sbjct: 363 IVTRIDDSVTRVSGKKPLILRRARGYVPSPIHCK---WTLPATIGCGGGLKSTFCLGKKN 419 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 SQH+GDLS+ ++E++ ++ ++D P+ V D HP Y+S+ +A+ + +P Sbjct: 420 SLFTSQHIGDLSNLESYDFFQESIEHLKKVFDIEPEIAVCDLHPDYLSTHYAKALGIPLY 479 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAHA A +AEH VIA+ LDG G G++G WGGE L+ + L L Sbjct: 480 QVQHHHAHATAVMAEHGLK---DPVIAIILDGTGYGDDGTSWGGEILQADLTSFTRLAHL 536 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS----VQQQNWSVLARAIERGIN 587 + LPGGD AA +PWR ++ + + + +++ L + N Sbjct: 537 SHLRLPGGDKAATEPWRMGISALHSLYGDGLSDKNIPTALRQIERDKREPLLSMLNNNFN 596 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD----- 642 +PL SSCGR FD V++ LG +SYEG+AA LE A C T + D Sbjct: 597 SPLTSSCGRLFDTVSSLLGIC-QKMSYEGQAAMELEDRARRCLNSTWKNDLISEDYDQFP 655 Query: 643 ------------NQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 N L L + + A FH L + AL + T G+ Sbjct: 656 FLLDDRGITWEINSLQLIKTVLDDIQMGKKTPEIALRFHLLLIKNITALTLQLCTQTGLN 715 Query: 691 TLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 +V SGG + N ++ L H +A + ++ +++P DGG+SLGQ + + ++ Sbjct: 716 QVVLSGGCMQNAIILEGLRHTMATHNISVFTGENIPINDGGISLGQTITGGLQHVSRNSH 775 Query: 749 NG 750 G Sbjct: 776 EG 777 >UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH Length = 796 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 353/781 (45%), Positives = 444/781 (56%), Gaps = 50/781 (6%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLA 69 +RG VQGVGFRP VW+LA L G V ND DGV++R D + F+ +L CPPLA Sbjct: 1 MRGMVQGVGFRPTVWRLAHDCGLSGSVRNDSDGVQIRAWGDAVALDRFIARLRDECPPLA 60 Query: 70 RIDSVEREPFIWSQLPTE---FTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 RID++ER + F I S GG + T +VPDA C AC+A++ P RRYRY Sbjct: 61 RIDAIERRVLAQDAEGADLGGFRIVASVGGPVRTGVVPDAVVCSACIADIGDPLNRRYRY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF NCTHCGPR +I+RA+PYDR T MAAFP+CPAC EY DP DRRFHAQP+AC CGP Sbjct: 121 PFANCTHCGPRLSIVRAIPYDRANTAMAAFPMCPACLAEYEDPADRRFHAQPLACAACGP 180 Query: 187 HLEWVSHGE---HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 H+ W+ H A + A++AA A L+ G IVAIKGIGGF LACDA N AVA LR RK Sbjct: 181 HV-WLEHTGGPLAAGPDDAIRAAWALLRDGGIVAIKGIGGFQLACDACNPVAVARLRQRK 239 Query: 244 HRPAKPLAVM---LPVADGL--PDAAR-QLLTTPAAPIVLV----DKKYVPELCDDIAPD 293 R KP A+M L V P AA LL +PAAPIV+V D++ P L D+AP Sbjct: 240 RRERKPFALMARDLAVIRQYSEPTAAECGLLQSPAAPIVIVQTRSDRQGAP-LAPDVAPG 298 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + +G MLP PL LL+ P+V+TSGN S +P N A L IAD FL+H+R Sbjct: 299 IAALGFMLPGTPLHWLLMAMADRPIVLTSGNASDEPQCTENADARMRLGAIADAFLMHDR 358 Query: 354 DIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 D+V+R+DDSV R + ++RRSRGY P L LPPGF PVL +G +LKNTFCL+R Sbjct: 359 DVVRRVDDSVARVVLDVPRVMRRSRGYAPAPLPLPPGFAAAAPVLAMGGELKNTFCLMRA 418 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM---- 466 +A+LS H+GDL D +R AL +++ P V D HP Y+S + R++ Sbjct: 419 GEAILSHHMGDLEDALTHADYRRALTQYMALFEHGPHLVAVDMHPEYLSGKIGRDLARQG 478 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 LP V HHHAH AAC+AE++ L G V+ + LDGIG G +G+LWGGE L +YR+ Sbjct: 479 QLPVAQVQHHHAHIAACMAENRVALAAGPVLGVALDGIGYGVDGSLWGGEFLLADYRDFT 538 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNW------SVLAR 580 L V +PGG+ A QPWRN A V + AS+ + VL Sbjct: 539 RLACFKPVGMPGGERAIHQPWRNTYAHLAAAVGWDTLIARHASLALVRFLATRPREVLDA 598 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA------ASCHGVTH 634 + R IN+PLASS GR FDAVAAA G P YEG+AA EALA G + Sbjct: 599 MLTRSINSPLASSAGRLFDAVAAAAGVCPERACYEGQAAMEFEALADRRTLSEEDDGRAY 658 Query: 635 PVTM-PRVDNQLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMRG-- 688 P + P L+ W L A P + FH LA A+++ A G Sbjct: 659 PFAIVPGTPACLEPGPMWVALLADLARATPAPLISARFHKGLAIAIASMVAYLADCPGAG 718 Query: 689 --ITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 + SGGV NR+L ++A L+ +L +PA DGGLS GQ IAAAR L Sbjct: 719 CRAVPVALSGGVFQNRILLEQVATRLSAQGRRVLTHSQVPANDGGLSFGQAAIAAARSLG 778 Query: 745 G 745 G Sbjct: 779 G 779 >UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=Q13HK4_BURXL Length = 812 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 319/777 (41%), Positives = 439/777 (56%), Gaps = 54/777 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQH 64 G +R+RG VQGVGFRP VW+LA + G VCNDG+GV +R D E F+ L+ Sbjct: 20 GEAIRVRGLVQGVGFRPAVWRLAHDCGVSGTVCNDGEGVLIRAWADRPVLERFVAGLHGR 79 Query: 65 CPPLARIDSVEREPF-IWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 CPPL RIDSVER + P EFTI +S GG +T +VPDA TC ACL E P RR Sbjct: 80 CPPLGRIDSVERRAVPDVAPAPGEFTIVESGGGPAHTGVVPDAVTCRACLDETLDPSGRR 139 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCTHCGPR +I+ A+PYDR T MAAFPLC AC +EY DP DRRFHAQ VACP Sbjct: 140 YRYPFTNCTHCGPRLSIVGAIPYDRCATTMAAFPLCGACRREYDDPGDRRFHAQAVACPA 199 Query: 184 CGPHLEWVSHGEHA-EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + W+ + + E+ L+ A L++G IVAIKG+GGF LAC A AV LR Sbjct: 200 CGPRI-WIEQADGSRERGDPLEVACRYLRLGGIVAIKGLGGFQLACMATAQAAVTKLRVL 258 Query: 243 KHRPAKPLAVM---LPVAD---GLPDAARQLLTTPAAPIVL---VDKKYVPELCDDIAPD 293 KHR KP A++ + +A+ + +A LL + A PIV+ + + +L +AP Sbjct: 259 KHRARKPFALLARDVTMAERYCSVSNADAALLRSAAGPIVIMPAIGRTTAADL-SGVAPG 317 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 +G MLP+ PL HL+++ L P+V+TSGN++ +P +N+ A L G+AD FL+H+R Sbjct: 318 TATLGFMLPSTPLHHLIMRALDAPIVLTSGNVADEPQCTANDDARIRLAGMADVFLMHDR 377 Query: 354 DIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +I R+DDSV R +LR SRGY P L +P F PPVL +GA KN FCL+R Sbjct: 378 EIASRIDDSVARVLHGVPRLLRSSRGYAPAPLRMPHDFAAAPPVLAMGAQQKNAFCLLRE 437 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREM 466 +A++S H+G+L + ++ +L + ++ + V D HP Y+S + AR+ Sbjct: 438 GEALVSHHIGELENGETYRDYKASLARYEKLFGHDARVVAVDLHPEYLSRKLGIDIARQR 497 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 +LP + HHHAH AACLAE+ L +++ + LDG GMG + LWGGE L Y +C Sbjct: 498 SLPLAEIQHHHAHFAACLAENDIGL-ASNILGVVLDGHGMGTDRRLWGGEFLLGGYVDCT 556 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQ---QQNWSVLA 579 + L VALPGG A +PWRN A LR W+ Y++ V+ + ++L Sbjct: 557 RVASLTPVALPGGMRAVLEPWRNTYAH-LRASLGWEWVARRYAKLDLVRFLAGRPLALLE 615 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASCH----GVT 633 + IE G+N+P++SS GR FDAVAAA G + YEG+AA EAL + H + Sbjct: 616 QMIEGGVNSPVSSSAGRLFDAVAAAAGVCRERVQYEGQAAIEFEALIDRRTLHDEDDALA 675 Query: 634 HPVTMPRVDNQ-----LDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQAT 685 +P + + +D W L+ P A FH +++ Sbjct: 676 YPFRIGEASDAAYPLLIDAKPMWLALLDDLMRATPAPVIAARFHKGFTIAIVQMVKRALG 735 Query: 686 MR------GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQ 734 R + T+ SGGV+ N L +L+ LA +L + +PA DGG++LGQ Sbjct: 736 SRLHGSAPAVRTVALSGGVMQNAALFEQLSERLAACGLVVLAHRQVPANDGGIALGQ 792 >UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=A1ASQ9_PELPD Length = 780 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 324/765 (42%), Positives = 423/765 (55%), Gaps = 45/765 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETFLVQLYQHC 65 +++ + G VQGVGFRPF+++LA + + G V N GV + R FL + Sbjct: 11 IRVEVEGIVQGVGFRPFIYRLAARYGISGWVRNTPAGVLLEGEGERSHLSAFLRDISAQA 70 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA I SV E I F+I S+GG + QI PD C CL E+ P +RRY Sbjct: 71 PPLAAISSVHSET-ISVTGEGGFSILPSSGGENSAQISPDCDVCEDCLRELFDPRDRRYL 129 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR++II A+PYDR FT M F +C C EY DP +RRFHAQP ACP CG Sbjct: 130 YPFINCTNCGPRYSIITAIPYDRRFTTMERFAMCADCRAEYEDPANRRFHAQPNACPVCG 189 Query: 186 PHL-------EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 P + V G L AA+ L+ G ++A+KGIGG+HLA DA N AVA Sbjct: 190 PRIALLDSSGREVMQGGGGRGHDVLLAAVNLLQRGGVLAVKGIGGYHLAVDACNEEAVAN 249 Query: 239 LRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK R KP A+M P + AR +LL P PIVL+ K+ + +AP Sbjct: 250 LRRRKQRDEKPFAIMAPDLARIDSFARCSETEQRLLGGPERPIVLLPKREATPIASLVAP 309 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 D GVMLP+ PL HLLL+ LVMTSGN S +P A + +A L GIAD FL H+ Sbjct: 310 DNGYFGVMLPSTPLHHLLLRNNFIALVMTSGNQSDEPIAYRDSEAREQLAGIADLFLAHD 369 Query: 353 RDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I R DDS++R S LRRSRGYVP + LP P VL +G +LK T CL R Sbjct: 370 REIHVRSDDSIIRVFHGSPLFLRRSRGYVPRGIRLP---AEQPSVLAVGGELKATVCLTR 426 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NL 468 ++A LSQH+GDL + E + ++ I + P V HD HP Y+S+ +A ++ +L Sbjct: 427 NDRAFLSQHIGDLKNSATLRSLEECVAHLEKILEIRPALVAHDLHPDYLSTAYAVDLPDL 486 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH A+C+AE+ G+ I + DG G G +G +WGGE L YRE Sbjct: 487 PRVAVQHHHAHMASCMAENSLE---GEAIGVIFDGTGYGLDGTVWGGEFLVGGYREFRRQ 543 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCL----RFVPEWQNYSETASVQQQNWSVLARAIER 584 G + VALPGGD A ++P+R L+ R Q S V Q +L R +ER Sbjct: 544 GHMRLVALPGGDAAVREPYRMALSYLFDAGERDFAALQ-LSCLGDVSAQERHLLQRMLER 602 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT---HPVTMPRV 641 GINAPL SSCGR FDAV+A L + ++YEG+AA LEALA S VT +P ++ Sbjct: 603 GINAPLTSSCGRLFDAVSALLDVR-SRITYEGQAAIELEALAES--AVTDREYPFSVEEF 659 Query: 642 DNQ--LDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + LD+ + L A P A FH+++A A + G+ +V SG Sbjct: 660 AGRLILDMRPALVELLKDLALGVPRAIMARCFHNSMAAATAGMCERIRCRNGLNRVVLSG 719 Query: 697 GVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 GV N+LL + LA DF + + +P GDGGL+LGQ VIA Sbjct: 720 GVFQNKLLVEGTLNRLAELDFQVFTHRLVPPGDGGLALGQAVIAG 764 >UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus cereus group RepID=A0RG62_BACAH Length = 793 Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust. Identities = 289/768 (37%), Positives = 432/768 (56%), Gaps = 43/768 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 + +++G VQGVGFRPFV+++A++ +L+G V ND +GV + + + + F+ + + P Sbjct: 28 KYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIHDIEFNSP 87 Query: 67 PLARIDSVER-EPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRY 124 LA + V+ E + + F I S + T I PD C CL E+ P RR+ Sbjct: 88 ELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRF 147 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPR++II+ +PYDRP+T M FP+C CDKEY+D LDRRFHAQP AC +C Sbjct: 148 RYPFINCTNCGPRYSIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKC 207 Query: 185 GPHLEW-VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP ++ + G + + ++ I LK GKI+AIKG+GG+HL D N AV LR RK Sbjct: 208 GPQVQLKTADGTNVPTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNHEAVKELRKRK 267 Query: 244 HRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP A+M D + + A LL + PIVL++KK + D+AP+ N Sbjct: 268 KRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDVAPNNNTY 327 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVML PL HL+L+ L+ TS N+S +P + A+ L+GIAD +L+HNR+I Sbjct: 328 GVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFT 387 Query: 358 RMDDSVVR--------ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+DDS+VR +++RR+RGYVP+ + G N VL LGA+LKNT CL + Sbjct: 388 RVDDSIVRGIDLDDEITKIQIIRRARGYVPNPIDFKEGSTN---VLALGAELKNTICLTK 444 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-REMNL 468 GE+A +S H+GDL + I ++ + +Q I++ +P + D HP + S+++A + L Sbjct: 445 GEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKYAFDQKTL 504 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH A+C+ ++Q LDG V+ + LDG G G++G +WGGE L ++ + Sbjct: 505 PVVQVQHHHAHMASCMVDNQ--LDGP-VLGVILDGTGYGDDGNIWGGEFLIGDFLNYQRA 561 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQN---WSVLARAIERG 585 + LPGGD A K+P+R L + E + ++N VL + I++G Sbjct: 562 AYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKG 621 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-- 643 IN+PL SS GR FDAV++ LG T+ YEG+AA LE A + ++P+ + Sbjct: 622 INSPLTSSMGRLFDAVSSLLGVR-ETVQYEGQAAIELEQ-AIDINNSSNPLLSYEIVTSN 679 Query: 644 ---QLDLATFWQQW----LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 ++D+ +++ L + + ++ FH + Q ++ GI LV SG Sbjct: 680 GIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVLSG 739 Query: 697 GVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 GV N+ L L F + + +P DGG+SLGQ IAA R+ Sbjct: 740 GVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRY 787 >UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 Tax=Desulfovibrionales RepID=Q726N9_DESVH Length = 839 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 323/779 (41%), Positives = 433/779 (55%), Gaps = 74/779 (9%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLA 69 + G+VQGVGFRPFV+++A L G V N +GV + ++ E E F L PPLA Sbjct: 65 VSGQVQGVGFRPFVFRIATGHALTGTVSNTSEGVFIEVQGPHEAVEAFGDDLVGKLPPLA 124 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRYPF 128 ++ S E E T+F I S+GG + ++ PD A C CLA+M P RRYRYPF Sbjct: 125 QVVSCEHEDLPLVAGETDFIIVASSGGHGHQVLISPDMAVCDDCLADMRDPAGRRYRYPF 184 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 NCT+CGPR+TI R++PYDR T MA FPLCPAC EY DP+DRRFHAQP ACP CGP L Sbjct: 185 TNCTNCGPRYTITRSIPYDRDKTSMACFPLCPACRAEYEDPMDRRFHAQPNACPVCGPRL 244 Query: 189 EWVSHGEH---AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 W++ + AE + A+ L G+I AIKG+GGFHLACDA + AV TLR RK R Sbjct: 245 -WLTARDGTTLAEGDYAITVTAHVLNTGRIAAIKGLGGFHLACDATDDAAVTTLRERKRR 303 Query: 246 PAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 P KPLAVM+P D + PD R +L+ PIVL + L ++PD + VG Sbjct: 304 PHKPLAVMVPDMDTVRRIAAPTPDEERLILSQ-ERPIVLCRARDDGPLASAVSPDTDHVG 362 Query: 299 VMLPANPLQHLLLQELQ-------------------CPLVMTSGNLSGKPPAISNEQALA 339 VMLP PL H+L L C LVMTSGN S +P + N ++L Sbjct: 363 VMLPYTPLHHVLFDTLADLRREGGTSSRRTPSASDVCALVMTSGNASNEPICLGNRESLR 422 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVR----ESGEM-LRRSRGYVPDALALPPGFKNVPPV 394 L IAD FL+H+RDI+ R DDSVVR E G + +RR+RG+VP + LP + P V Sbjct: 423 RLAHIADAFLLHDRDILIRTDDSVVRAVQGEDGPLFMRRARGFVPRPVRLP---DSGPCV 479 Query: 395 LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAH 454 L G +LKNT C+ R + A +SQH+GD+ + +RE + +I P+ VV D H Sbjct: 480 LATGPELKNTLCITRNDMAFVSQHIGDMHNLETLGFFREIAAHLADILQVEPEAVVRDLH 539 Query: 455 PGYVSSQWAREMNLPTQTVLHHHAHAAACLAE--HQWPLDGGDVIALTLDGIGMGENGAL 512 P Y++++WA + LP + HH+AHA + LAE H+ P + +TLDG G G++G + Sbjct: 540 PDYMTTRWAEDCGLPVLALQHHYAHAYSVLAENGHEGP-----ALCVTLDGTGYGDDGTI 594 Query: 513 WGGECLRVNYRECEH--LGGLPAVALPGGDLAAKQPWRNLLAQCLR---FVPE-----WQ 562 WGGE L V+ E EH L + LPGG+ A ++PWR R F P+ W Sbjct: 595 WGGEFLYVDSLELEHERLAHFSRLPLPGGETAIREPWRIAQGALWRLGMFEPDSRVWPWL 654 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + E AS ++ +++G+N P+ASSCGR FDAV+A LG +++YEG+AA L Sbjct: 655 PHREEAS------RMVGLMLDKGVNTPMASSCGRLFDAVSAMLGLC-ESITYEGQAAILL 707 Query: 623 EALAASCHGVTHPVTMPRVDNQLDLAT---FWQQWLNW--QAPVNQRAWAFHDALAQGFA 677 E + +P + + L T F +++W + P A FH L QG A Sbjct: 708 ERIQDMSETTPYPCPLKDGVQPMVLDTAQLFLHAYVDWAMETPPGIIARRFHLGLIQGVA 767 Query: 678 ALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQ 734 L G+TT+ SGGV+ N L A L L L L ++LP DG +SLGQ Sbjct: 768 DLAASLCGAMGLTTVGLSGGVMQNLTLAAGLPEALRARGLVPLVHRTLPPNDGCISLGQ 826 >UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYI7_CHLT3 Length = 781 Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust. Identities = 307/763 (40%), Positives = 418/763 (54%), Gaps = 38/763 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ ++G VQGVGFRPFV+ LA+ L G V N GVE+ + + FL +L P Sbjct: 29 KVLVKGIVQGVGFRPFVYNLAESKGLSGFVTNSAAGVEIEVEGKSAELSAFLRELENFAP 88 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PLA I + E I ++ + F I S G + T I PD A C CL E+ P +RRYR Sbjct: 89 PLASITEMRVEK-IPAKGASGFKILASKQGEKIATLISPDVALCGDCLKELLDPSDRRYR 147 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR+TII +PYDRP T M FPLC CD+EY P +RRFHAQP ACP+CG Sbjct: 148 YPFINCTNCGPRYTIIDNIPYDRPNTSMKHFPLCSDCDREYHAPENRRFHAQPNACPDCG 207 Query: 186 PHLEWVSHGEHAEQEAA--LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L + + +E A + + LK+G IVAIKG+GGFHLACDA N AV LRARK Sbjct: 208 PKLS-LHKPDRSEILTADPISEIVRLLKLGHIVAIKGLGGFHLACDAENDEAVKRLRARK 266 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 HR KPLAVM+ + D + L + +PI+L+ KK L + IAP +++ Sbjct: 267 HRDEKPLAVMVQDLSSAQKFCQISDEEARALCSAQSPILLL-KKNGTGLPESIAPGNSQL 325 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G++LP P+ HLL+Q VMTS NLS +P AI N++A L IAD FLIHNR+I Sbjct: 326 GILLPYTPVHHLLMQSQLQAAVMTSANLSDEPIAIDNDEAFERLGQIADYFLIHNREIYL 385 Query: 358 RMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R DDSV ++RRSRGY P + + + VL +G +LKNT CL++ QA Sbjct: 386 RCDDSVAAFWAGKLRLIRRSRGYAPRPILVQSKGET---VLAVGGELKNTVCLLKENQAF 442 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NLPTQTV 473 LSQH+GDL + +++ +Q I++ P+ +VHD HPGY+SS W E + + V Sbjct: 443 LSQHIGDLENLDAYNHFQKTSAHLQRIFEAKPELLVHDLHPGYLSSHWVSEQPEMASLAV 502 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HHHAH AAC+AEH+ G+VI T+DG G G +G +WGGE N Sbjct: 503 QHHHAHMAACIAEHRLQ---GEVIGFTMDGTGYGTDGTIWGGEVFIGNECHAVRFASFEP 559 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASS 593 + LPGGD A K PWR ++ ++ E + + N ++ + R N+PL SS Sbjct: 560 MPLPGGDAAIKAPWRTGISYLMKSFD--GKLPELPFLPEHNTEMVCDMVRRKFNSPLTSS 617 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQ 653 GRFFDAVA+ G ++ YEG+AA A + +V + L Sbjct: 618 AGRFFDAVASICG-EKKSVRYEGQAAIEFMQKADGLDVPPFEIDFGKV-GHVRLMMIQPV 675 Query: 654 WLNWQAPVNQRAWA------FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 ++ + + A FH L F A+ E + GI T+V SGGV N +L Sbjct: 676 IVSLVKAIREGESASRLSSRFHKTLVAYFTAMANEARSETGIKTVVLSGGVFQNYILLEG 735 Query: 708 LAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 L L F + + +P DGG+SLGQ +I A +L G+ + Sbjct: 736 LVSALLKQGFEVFSHEQVPTNDGGISLGQALIGRA-YLKGDYR 777 >UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Hydrogenothermaceae RepID=C0QP96_PERMH Length = 747 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 294/750 (39%), Positives = 412/750 (54%), Gaps = 35/750 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 +++ + G VQGVGFRPFV+ A + NL G V ND GV + + +D FL+ L Sbjct: 5 LKIHLTGAVQGVGFRPFVYNTALRHNLKGYVINDTHGVVIEVEGEEDDINRFLISLNTEK 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRY 124 PPLA I S E E S EFTI++S I+PD + C CL+EMN +RRY Sbjct: 65 PPLAHIFSQEIEELPLSGF-EEFTIKKSESKGKKEVFILPDISVCDQCLSEMNNKKDRRY 123 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPRF+II +PYDRP T M F +CP C++EY+DP DRRFHAQP ACP C Sbjct: 124 RYPFINCTNCGPRFSIIERLPYDRPNTTMKKFRMCPDCEREYKDPSDRRFHAQPNACPVC 183 Query: 185 GPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GPHL S AE+E AL+ A+ L GKI+A+KGIGGFHL CDA + A+ LR R Sbjct: 184 GPHLSLYSSDRKFIAEREEALKIAVELLGKGKILAVKGIGGFHLVCDATDDKAIDLLRER 243 Query: 243 KHRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K R KP AVM D + D A ++ +P PIV+V K L +AP L+ Sbjct: 244 KRRGEKPFAVMFRDIDQIKDYAEITPFEEAVILSPERPIVIVRSKKETGLSKGVAPYLDR 303 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GV LP +PL HLLL + PLVMTS NLS +P N++A L D L+HNRDI Sbjct: 304 IGVFLPYSPLHHLLLNDYGKPLVMTSANLSDEPIVKDNDEAFEKLSVFTDYILVHNRDIR 363 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R+DDSVVR + +RRSRGY P + LP + VL +G KNT + ++A Sbjct: 364 NRVDDSVVRIIDKKISFIRRSRGYAPLPVKLPLRLER--KVLAVGGHQKNTIAIGFDDKA 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLP 469 LSQH+GDL + E + ++Y F P VV D HP Y S++WA + ++P Sbjct: 422 FLSQHIGDLETLDACRNFEEIINRFFDLYSFQPDVVVSDMHPAYHSTRWAEDYTEKNSIP 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AHA + +AE + G ++++ DG G G +G +WGGE L +Y + E + Sbjct: 482 LIQVQHHYAHALSLMAESG--IREGKFLSVSWDGTGYGTDGNIWGGEFLLCDYEDFERVY 539 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCL----RFVPEWQNYSETASVQQQNWSVLARAIERG 585 L GG+ A K+P R L+ + + S+ + ++ R E+G Sbjct: 540 HFDYFRLLGGEKAVKEPRRVALSILFDMYGKDIYRLSEVQTLKSLTDKEMEIMFRVWEKG 599 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +N+PL+SS GR FDA A+ +G TLSYEG++ +E +PV + D + Sbjct: 600 VNSPLSSSAGRLFDAAASIIGIR-QTLSYEGQSGMIMENYYRWDIEDHYPVDLR--DGVI 656 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM-RGITTLVFSGGVIHNRLL 704 D + +N ++ ++ + F ++L + ++ E + + G+T VF + ++L Sbjct: 657 DWRPLFDALINDRSEIDIKITRFINSLGKVVLRIVDEYSDIPSGLTGGVFQNRFLTEKIL 716 Query: 705 RARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 R L FT + +P DGG+SLGQ Sbjct: 717 RMAEKRGLKIFT---HKKVPPNDGGISLGQ 743 >UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QQX5_9BACI Length = 758 Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust. Identities = 304/763 (39%), Positives = 420/763 (55%), Gaps = 41/763 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQH 64 +++ ++G+VQGVGFRPFV+QLA + ++ G V N+ DGV V ++ ++FL+ L Sbjct: 4 SIKVTVKGRVQGVGFRPFVFQLAHRYHIKGTVQNNMDGVTVFAEGEEKELQSFLLSLQTE 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 P L+RID ++ + +F+I +S ++ ++P D A C CL EMN P R Sbjct: 64 APRLSRIDQLDVMEADYQGF-EQFSIIESERKGASSLVIPIDTAVCDDCLQEMNDPNNHR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT CGPR+TII +PYDRP+T M +F +C C KEY DPL+RR HAQP+ACP Sbjct: 123 YRYPFINCTQCGPRYTIIEQLPYDRPYTSMKSFSMCEHCQKEYEDPLNRRHHAQPIACPV 182 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGPH+ V A+ A L G IVAIKG+GG+HLACDA N AV LR RK Sbjct: 183 CGPHVALVDRNGRTLDGDAIDKAKQLLLSGAIVAIKGLGGYHLACDATNEQAVQQLRTRK 242 Query: 244 HRPAKPLAVM---LPVADGL---PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP +PLAVM L V + D +++LT+P APIV++ +K L +AP L V Sbjct: 243 QRPTRPLAVMAASLSVVKQMCEVNDEEKRVLTSPEAPIVVLKRKTTYPLAPSLAPGLKTV 302 Query: 298 GVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP PL HLLL E P LVMTS N SG P +EQAL DL+ IAD FL+HNR IV Sbjct: 303 GVMLPYTPLHHLLLDEEHIPVLVMTSANRSGVPILYKDEQALQDLKSIADYFLVHNRPIV 362 Query: 357 QRMDDSVVR-ESG--EMLRRSRGYVPDALALPPGF--KNVPPVLCLGADLKNTFCLVRGE 411 +DDSVV+ ++G + LRR+RG+VPD P F +V + LG KN F R E Sbjct: 363 HPIDDSVVQIQNGNVDFLRRARGFVPD-----PFFTTSDVHEIAALGGQQKNVFAFGRNE 417 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 Q L H+GDL + ++ ++ P+ V D HP Y + +E ++ Sbjct: 418 QIFLGPHIGDLQNMESIEHFQREYEHLRTWMGVEPKAVAVDMHPNYETWNIVKEWDVSVI 477 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH +C+ ++ L LDG G GE+G +WG E L + + LG L Sbjct: 478 PVQHHHAHMVSCMEDNGIK---NSCFGLILDGTGYGEDGHIWGFELLYGDASHYKRLGHL 534 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSETASVQQQNWSVLARAIERGINAP 589 LP G+ K+PWR + ++ E ++ E +Q +L + +E+ I+AP Sbjct: 535 TYTPLPSGERCIKEPWRTAVGMLGYYLGEKGYKLAIERFPDKQYEIHILKQMVEKDIHAP 594 Query: 590 LASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QL 645 A +CGR FDAV+A L C +T YEGEAA L L H + P +N ++ Sbjct: 595 KAGTCGRLFDAVSAFLHVCTHST--YEGEAAIRLAELVDEGH-IYEPYPFELKENNIMEI 651 Query: 646 DLATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMRE--QATMRGITTLVFSGGVIH 700 D+A W + + V A FH + A++R+ + + +V SGG +H Sbjct: 652 DVAAMWVAIAEDVKRNINVETIAGRFHQTVVSAAIAMIRKAVEEHPQYHREIVLSGGSMH 711 Query: 701 NRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 NR L L L F + +++P DGGL+LGQ +IAA R Sbjct: 712 NRYLVKHLTTNLRRLGFNVYTHRNVPCSDGGLALGQLIIAANR 754 >UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 Tax=Bacteria RepID=B7KHW8_CYAP7 Length = 780 Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust. Identities = 310/792 (39%), Positives = 430/792 (54%), Gaps = 68/792 (8%) Query: 1 MAKNTSCG-VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---T 56 MA NT+ + L IRG VQGVGFRPF+++LA +L+L G V N GV + + D + T Sbjct: 1 MADNTTKQRLSLIIRGAVQGVGFRPFIYRLATELDLVGWVNNSSVGVFIEVEGDKDQLDT 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLP--TEFTIRQSTGGTMNTQIVPDAATCPACLA 114 FL ++ PP ++I ++E + W L F IR S G ++PD ATCP CL Sbjct: 61 FLRRVQTENPPRSQIQAIETQ---WLDLTGYKTFEIRHSVSGEKTAVVLPDLATCPDCLQ 117 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 ++ P RRYRYPF NCT+CGPR+TII A+PYDR T M F LCP C EY +PLDRRF Sbjct: 118 DIFDPHNRRYRYPFTNCTNCGPRYTIIEALPYDRCHTTMKGFKLCPQCQAEYENPLDRRF 177 Query: 175 HAQPVACPECGPHLE-WVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 HAQP ACP+CGPHLE W G+ E E+AL A ++ GKIVAIKG+GGFHL DARN Sbjct: 178 HAQPNACPKCGPHLELWDQQGQILETHESALMATATAIREGKIVAIKGLGGFHLVVDARN 237 Query: 233 SNAVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLV-------- 278 + AV LR RK RP KP AVM P + L + LL + PIVL+ Sbjct: 238 TTAVQELRKRKQRPDKPFAVMYPSLNLLKEHCLVTPTEEALLNSAECPIVLLKVLSSNFR 297 Query: 279 ----------DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGK 328 + + E+ +AP+ +GVMLP PL HLLL EL P+V TSGN+S + Sbjct: 298 SPLTPLYKGGNIRKEGEISPAVAPNNPYLGVMLPYTPLHHLLLAELGFPIVATSGNISDE 357 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG--EM-LRRSRGYVPDALALP 385 P I +AL L IAD FLIHNR I + +DDS+VR G EM +RR+RGY P + + Sbjct: 358 PICIDELEALQKLNQIADLFLIHNRPIFRPVDDSIVRMMGGREMVMRRARGYAPFPIMIK 417 Query: 386 PG-FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF 444 + P +L +G LKNT + R Q LSQH+GDL +++ + ++ +YDF Sbjct: 418 SSPTHSQPSILAVGGHLKNTIAIARPPQIFLSQHIGDLETPAAFEYFQQVIASLRGLYDF 477 Query: 445 TPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGI 504 PQ + DAHP Y+SSQ+A+E NLP V HH+AH +C+AEH V+ + DG Sbjct: 478 NPQLIARDAHPDYISSQFAQEQNLPLIKVQHHYAHVLSCMAEHGLE---PPVLGVAWDGT 534 Query: 505 GMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY 564 G GE+ +WGGE + V + + LPGG+ A K+P R+ L + E N Sbjct: 535 GYGEDETIWGGEFIYVTEDHYQRVAHFRPWRLPGGEKAVKEPRRSALG-----LLEAINL 589 Query: 565 SETA---SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 +T+ + Q +L +++ +N+PL SS GR FD VA+ L S+EG+AA Sbjct: 590 PKTSIEKAFTPQELVLLQTILKKHLNSPLTSSVGRLFDGVASLLNIRHQA-SFEGQAAME 648 Query: 622 L-----EALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALA 673 L E + + + P V +D + + LN + Q + FH+ L Sbjct: 649 LEFIIGETITDKYYDFLLSSSTPTV---IDWSPIIKAILNDIFCNISLGQISVKFHNTLV 705 Query: 674 QGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLS 731 + +++ + +V +GG NR L R L + + QS+P DGG++ Sbjct: 706 KIILEIVKRFPAHQ----IVLTGGCFQNRYLTERAIEQLQQHHYRPYWHQSIPPNDGGIA 761 Query: 732 LGQGVIAAARWL 743 LGQ + ++ + Sbjct: 762 LGQVIATLSKRM 773 >UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 Tax=Bacteria RepID=A7NKB8_ROSCS Length = 779 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 329/763 (43%), Positives = 419/763 (54%), Gaps = 51/763 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP----ETFLVQLYQHC 65 +L +RG VQGVGFRPFV+ LAQ+L L G V ND DGV + + E P + F L Sbjct: 18 RLMVRGMVQGVGFRPFVYNLAQRLGLGGFVLNDSDGVTLEI-EGPASALDAFEQTLRTSP 76 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERRY 124 PPLARID++ EP + S+ T F I S T+ NT I PD ATC CL E+ P +RR+ Sbjct: 77 PPLARIDAIGAEP-VASRGETHFRIETSRAATVRNTLISPDVATCDDCLRELFDPADRRF 135 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPFINCT+CGPRFTI+ +PYDR T M FP+CPAC EY DPLDRRFHAQP AC C Sbjct: 136 GYPFINCTNCGPRFTIVLDVPYDRAQTTMRVFPMCPACRSEYDDPLDRRFHAQPNACAVC 195 Query: 185 GPHL--EWVSHGEHAE---QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 GP L W S + L A A L G I+AIKG+GG+HLACDA +S AVA L Sbjct: 196 GPSLAFHWWSTEFRPRLPVHASPLDQAAAALAQGAILAIKGLGGYHLACDALDSAAVARL 255 Query: 240 RARKHRPAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 R RK R AKP A+M P + + PD LL + PIVL+D + +AP Sbjct: 256 RVRKQREAKPFALMAPDLEAIQRLCSVNPD-EEALLESRRRPIVLLDALPNVPVAPSVAP 314 Query: 293 DLNEVGVMLPANPLQHLLLQEL--QCP-----LVMTSGNLSGKPPAISNEQALADLQGIA 345 +G+MLP PL HLLL+ + P LVMTSGNLS +P A ++ A+A L IA Sbjct: 315 GYATLGIMLPYTPLHHLLLRAYAKEAPGRPAVLVMTSGNLSDEPIAYRDDDAVARLASIA 374 Query: 346 DGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 DG L HNRDI R DDSV R ++LRRSRGY P+ + L F P+L +G LK Sbjct: 375 DGMLTHNRDIHMRCDDSVARIVAGGVQLLRRSRGYAPEPVTLTLHFPR--PLLAVGGHLK 432 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFCL + A LS H+GDL + +RE +R ++D P+ V +D HP Y++++ Sbjct: 433 NTFCLAKEHDAFLSHHIGDLENLETLTSFREGVRHFARLFDCEPEVVAYDLHPEYLATKE 492 Query: 463 AREMNLPTQT-VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 A ++P + V HHHAH A+ LAEH VI + DG G G +G++WG E L + Sbjct: 493 ALASDIPLKIGVQHHHAHIASVLAEHGIE---DPVIGVAADGTGYGIDGSIWGCEVLIAD 549 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 RE L + LPGGD A +Q WR L + + +++Q W+++ Sbjct: 550 LREFTRFAHLAYIPLPGGDAAVRQVWRIGATYLQRAFGDAFLDLDIPFVQRIRRQQWTLI 609 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 AR IERGINAPL SS GR FDAVAA G L YEG+AA LE +AA +P + Sbjct: 610 ARMIERGINAPLTSSLGRLFDAVAAIAGIRDHAL-YEGQAAIELETVAAQ-DDRPYPFAL 667 Query: 639 ----PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 P + L + L APV + FH +A+ A + Sbjct: 668 LDGAPLRIDALPTIRAIVEDLRAGAPVALVSGRFHSTVAEALAQACERARATGAPAVVAL 727 Query: 695 SGGVIHNR----LLRARLAHYLADFTLLFPQSLPAGDGGLSLG 733 SGGV NR LL ARL F +L + +P DGGL LG Sbjct: 728 SGGVFQNRRLTELLVARLER--TGFRVLLNRRVPPNDGGLCLG 768 >UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridium RepID=B8I6F2_CLOCE Length = 790 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 293/789 (37%), Positives = 418/789 (52%), Gaps = 66/789 (8%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 G ++ I G VQGVGFRPF++ LA++ + G V N V + + D + F+ ++ + Sbjct: 3 GYRIIITGIVQGVGFRPFIFNLAERFGMKGWVGNTDSNVIIEIDSDFQKVVDFINEIKKS 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERR 123 P L+RI S+E + ++ F IR S + I PD ATC CL EM +RR Sbjct: 63 APVLSRIKSIEYKDIVYQGFKN-FEIRHSQKNSKGPVFISPDVATCCDCLREMKDKSDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT+CGPRFTII+ +PYDR T M F +C C +EY P DRR+H QPV+C E Sbjct: 122 YRYPFINCTNCGPRFTIIKNIPYDRDNTTMKYFEMCENCRQEYTKPSDRRYHTQPVSCHE 181 Query: 184 CGPHLEWVSHG-----EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CGPHL E + +K G IVA+KGIGG+HLACD N AV Sbjct: 182 CGPHLSIADETGKIMREIQSSRECITFTADLVKKGNIVAVKGIGGYHLACDGLNKKAVDR 241 Query: 239 LRARKHRPAKPLAVM---LPVAD---GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RKHR KP AVM L A+ + + +LT+ A+PIVL++KK L + +A Sbjct: 242 LRTRKHRDDKPFAVMAKDLRTAEKYCKINYVEKNILTSTASPIVLLEKKDGVILPESLAH 301 Query: 293 DLNEVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 +GVMLP P+ HLL +E P LVMTSGNLS +P +E+A+ LQGIAD +L Sbjct: 302 LNRYLGVMLPYTPVHHLLFEEKGFPELLVMTSGNLSNEPIFYKDEEAVEGLQGIADAYLT 361 Query: 351 HNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALP-------PGFKNVPPVLCLGAD 400 +NR+I R DDSV R ++RR+RG+VP+ +++ +P VL G + Sbjct: 362 NNREIYIRTDDSVTRVFNAKEYIIRRARGHVPNPVSINVHELLDMDKTIEIPSVLACGGE 421 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 LKN FCL +G+ LS H+GDL ++ + +R + + ++D +PQ + +D HP Y SS Sbjct: 422 LKNVFCLNKGKNFYLSHHIGDLENESTNIAFRNGIEHFKRLFDISPQLIAYDLHPNYYSS 481 Query: 461 QWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 Q+A ++ + ++ HH AH A+C+AE++ GDVI ++ DG G GE+G +WGGE Sbjct: 482 QYALKQRYVEKVSIQHHKAHIASCMAENKLK---GDVIGVSFDGTGYGEDGNIWGGEFFT 538 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPE-----WQNYSETASVQ 571 Y G L V +PG D A + PWR + L ++ VP+ Sbjct: 539 GGYYGFRRAGHLAYVMMPGSDSAVRHPWRMALSYLYASVQGVPDKVMEITNKLPAFMDRS 598 Query: 572 QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCH 630 ++ + +E+ IN+P SS GRFFDAV+A LG +SYEG+AA LE A SC Sbjct: 599 KEEIIFTIKMLEKRINSPFTSSMGRFFDAVSALLGI-KTNISYEGQAAIELEYYADLSC- 656 Query: 631 GVTHPVTMPRVDNQLDLATFWQQW-LNWQAPVNQ-------------RAWAFHDALAQGF 676 T P ++ F + + +N + Q + FH +A Sbjct: 657 --TDPYLF-----DIEKTVFEESFTINTGCTIKQIVDDILAGKGLGYISSRFHTTIAHIV 709 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 + +G+ +V SGGV N L L F + +P+ DGG+SLGQ Sbjct: 710 LEGCLNIRSRKGLKNVVLSGGVFQNITLLKMTVDSLEKQGFKVFIHSEVPSNDGGISLGQ 769 Query: 735 GVIAAARWL 743 ++A A+ + Sbjct: 770 SIMAIAQMI 778 >UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YU2_SOLUE Length = 725 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 319/757 (42%), Positives = 416/757 (54%), Gaps = 62/757 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 +++R++G VQGVGFRPFV+ LA +L L G V ND G+ V +P F+ L Sbjct: 4 IRIRVQGIVQGVGFRPFVYNLALRLPLAGHVFNDSSGLVVEAEGEPHALAAFVAALRTEH 63 Query: 66 PPLARIDSVEREPFIWSQLP---TEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGE 121 PPLA + R+ I P T FTI S T +V PD ATC CLAE+ P Sbjct: 64 PPLAWV----RDLSITELSPIGTTGFTILPSVAETGKFALVSPDVATCAECLAEIFDPVN 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPF NCT+CGPR+TIIR +PYDRP T MAAF +CP C EY DP DRRFHAQP AC Sbjct: 120 RRYRYPFTNCTNCGPRYTIIRDIPYDRPSTTMAAFAMCPLCRAEYEDPADRRFHAQPNAC 179 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 P CGP L A + +L G+I+AIKG+GGFHLACDARNS AV LRA Sbjct: 180 PACGPAL-----------SAGIPETQRRLAAGEILAIKGLGGFHLACDARNSAAVDALRA 228 Query: 242 RKHRPAKPLAVMLPVADGLPDAARQL----------LTTPAAPIVLVDKKYVPELCDDIA 291 RK R KP A+M V D DAAR+L LT P PIV++ ++ L +A Sbjct: 229 RKRRSDKPFALM--VRD--LDAARELCVVDHVAARALTGPRHPIVILLRRDGVPLPGAVA 284 Query: 292 PDLNEVGVMLPANPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P +G+MLP PL HLL LVMTSGNLS +P + N A L ++D L+ Sbjct: 285 PGNPTLGIMLPYTPLHHLLFAGAPFSALVMTSGNLSEEPIVVENADARQRLGPVSDWQLL 344 Query: 351 HNRDIVQRMDDSVVR--ESGE-MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+RDI R DDSVVR E E ++RRSRGY P L L + +P +L G +LKNTFCL Sbjct: 345 HDRDIYMRADDSVVRIFEGAERVMRRSRGYAPQTLDLG---RELPELLASGGELKNTFCL 401 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-REM 466 +G A+LSQH+GDL + + + E L ++ ++ TP+ V +D HPGY+S+++A + Sbjct: 402 TKGTHAILSQHVGDLENYETLLFFEETLANLKKLFRVTPRAVAYDLHPGYLSTKFALAQT 461 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 + V HHHAH A+C+AE+ LD G VI + DG G G +GA+WGGE L Y + E Sbjct: 462 GIQQIGVQHHHAHIASCMAENH--LD-GRVIGVAFDGTGYGLDGAIWGGEFLLAGYADFE 518 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 L V L GGD A ++PWR+ L + E A + + + I G Sbjct: 519 RRAHLRYVPLAGGDAAVREPWRSALGYGV----------EVAGIPESRLRAVRSMIATGT 568 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N SSCGR FDAVAA +G +++EG+AA LEA+A +P + V ++LD Sbjct: 569 NTVPTSSCGRLFDAVAAIIGLR-HEVTFEGQAAIELEAIADPTCTTRYPFDI--VGDELD 625 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN-RLLR 705 + + A FH+ LA + + + SGG N RLL Sbjct: 626 FRPMIECIVREHERPPTVAARFHNTLAAAIHEVCVRLRDEAAVNRVCLSGGTFQNMRLLG 685 Query: 706 ARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 +A A F + + +P DGGL+LGQ IAA R Sbjct: 686 LTVAQLRASAFEVYLHREVPPNDGGLALGQAAIAAER 722 >UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1S1_HALOH Length = 751 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 289/755 (38%), Positives = 413/755 (54%), Gaps = 34/755 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 +QL I G VQGVGFRPF+++LA++ NL+G V N GV V + + +T F+ Q+ + Sbjct: 6 LQLEIEGIVQGVGFRPFIYRLARENNLNGWVLNTSGGVLVEVEGNQKTLEMFIRQIDEES 65 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRY 124 PPLA+I +++ + + + F I+ S Q+ PD A C CL ++ P RRY Sbjct: 66 PPLAQITTIKSRE-VSVREDSSFVIKDSRKTYYTQVQLPPDIAICNDCLHDIMDPTNRRY 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPF +C +CGPRF II+++PYDRP T M F +CP C+ EY +PLDRRFHAQP ACP C Sbjct: 125 RYPFTSCVNCGPRFKIIKSLPYDRPRTTMKKFKMCPECNTEYNNPLDRRFHAQPNACPLC 184 Query: 185 GPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP L W+ GE + I LK G I+AIKGIGGFHL CDA S+ +A LR R Sbjct: 185 GPQL-WLKKMSGEKCLTRDPIGLTIDLLKKGNIIAIKGIGGFHLMCDATESDVIANLRTR 243 Query: 243 KHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP KPLA+M+ + ++LT PIVL+DKK +L +IAP + Sbjct: 244 KRRPDKPLALMMNKLTTVRKYCNVGSMEEEILTGIRRPIVLLDKK-GEKLPRNIAPGIRY 302 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP PL +LL + L+ TSGN+SG P N +L+GIAD L HNR+I Sbjct: 303 YGVMLPYTPLHYLLFDKGIEVLIATSGNVSGNPLEYQNGGVFENLKGIADYVLGHNREIY 362 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 +DDSVVR G ++RR+RGYVP L + G N L LG D KNTFC R + A Sbjct: 363 VPVDDSVVRVVGGKKRVIRRARGYVPQPLMV-GGLDN---GLALGGDQKNTFCFARNKYA 418 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 +SQ+LGDL + ++ + + +Y P +VVHD HP Y ++ +A V Sbjct: 419 FISQYLGDLGNIDNYNNFKLMIDHFKELYKIKPDFVVHDLHPDYQTTYYASFYG-DKIGV 477 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HHHAH A+C+AE+ VI L DG G+G +G +WGGE L ++++ + G L Sbjct: 478 QHHHAHIASCMAENNID---EKVIGLAFDGTGLGNDGNIWGGEFLICDFKDFKRGGHLNY 534 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASS 593 + +PGGD+A K+PWR ++ R + + + + ++ + + +G N P SS Sbjct: 535 MKMPGGDMAIKEPWRLAVSYLNRLRYDKADIINLLRIDEVEADIILKMLNKGFNCPETSS 594 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT--FW 651 GR FD VAA +G ++Y+ +AA LE++A + + V++ + + T Sbjct: 595 MGRLFDTVAALIGLR-KRITYQAQAALELESIADNNTEEIYHVSIEEKGQKYVVNTDPMM 653 Query: 652 QQWLNWQAPVNQRAW---AFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 ++ +R+ FH+ + + R GI ++ SGGV N+LL L Sbjct: 654 GGIISDHKKGVKRSIISSKFHNTVIAFTLEMCRLIRHKYGINSVALSGGVFQNKLLLEML 713 Query: 709 AHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L + F + +P D GLSLGQ IA+ R Sbjct: 714 CAGLKEQNFKVYSQAKIPCNDSGLSLGQLAIASNR 748 >UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Dictyoglomus RepID=B5YB71_DICT6 Length = 742 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 285/752 (37%), Positives = 417/752 (55%), Gaps = 39/752 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 +LR+ G VQGVGFRPF+++LA+ LNL G + N V++ ++ +D E F+ L + P Sbjct: 5 KLRVWGIVQGVGFRPFIYRLAKSLNLRGWILNSTGSVQILIQGEEKDLEKFMELLLKEAP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PL+RI+ +E+E I + ++F I +S I PD A C CL EM P +RRY Y Sbjct: 65 PLSRIEGIEKEE-IEVEEISDFKILESKEDIGFNFISPDIAICEDCLREMRDPKDRRYNY 123 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TII +PYDR T M F +C C KEY DP RRFHAQP++C CGP Sbjct: 124 PFINCTNCGPRYTIIEDLPYDRDKTTMKIFEMCEECYKEYHDPSSRRFHAQPISCYNCGP 183 Query: 187 HLEWVSHGEHAEQEAALQAAIAQ-LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + W+ + E+ L I++ L GKI+AIKGIGGFHLACDA + V LR RK R Sbjct: 184 QI-WI----YGEESKDLFKRISEYLDEGKILAIKGIGGFHLACDATQDDTVRKLRERKKR 238 Query: 246 PAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P+KP A+M+ + + + ++L + +PIVL+ K + ++ +AP N +GV Sbjct: 239 PSKPFALMMKDIETIKEYCFVSEEEEKILKSKQSPIVLLRIKDLKDISPLVAPGNNYLGV 298 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 MLP P HL+ + PL+MTSGNLS +P NE+A+ L+ IAD F+ HNR+I R+ Sbjct: 299 MLPYAPYHHLIFDHFKKPLIMTSGNLSDEPIVKDNEEAMERLKNIADIFVFHNREIKHRI 358 Query: 360 DDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSVV + +++RR+RGY PD + +P K P L LG +LKNTF L + +S Sbjct: 359 DDSVVFVENKEVQIIRRARGYAPDPVKIPIKLK---PTLALGGELKNTFSLGKENYVFMS 415 Query: 417 QHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--LPTQTVL 474 H+GDL D + E ++ ++ P+ +VHD HP Y+S+ A+ + + + Sbjct: 416 PHIGDLKDKETLEVYEETIQEYIRLFKIEPEILVHDLHPQYLSTDLAQRFKKYMEVRAIQ 475 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH AH + L + + D+I T DG G GE+G +WGGE N E + + Sbjct: 476 HHKAHFYSLLLDREIT---EDIICFTFDGTGYGEDGKVWGGEVFVGNIEEIKRVAHFKYF 532 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSC 594 + GGD+A + P + L+ L+ PE + ++ + +V +ER N SSC Sbjct: 533 PIVGGDIAIENPRKIALSYILKNFPEDTD-KILPNIDELEKNVTKILLEREENVFYTSSC 591 Query: 595 GRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDN---QLDLATF 650 GR FD V+A LG + YEG+AA LE A S +P + V+N ++D+ Sbjct: 592 GRIFDLVSALLGIR-ERIDYEGQAAIELEMHAMESKEESYYPFRL--VENEILEIDILPS 648 Query: 651 WQQWLNWQAPVNQR--AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 ++ + + ++R A FH+ ++Q AL I + FSGGV NRLL Sbjct: 649 IEKIIKEKNKKDKRDIARKFHNTVSQIIIALSEIFREEYKINKIGFSGGVFQNRLLLETT 708 Query: 709 AHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 L + F + Q +P DGG+SLGQ ++ Sbjct: 709 IPILKERKFEVYTHQKVPTNDGGISLGQMIMG 740 >UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteria RepID=HYPF2_RALEH Length = 807 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 327/798 (40%), Positives = 432/798 (54%), Gaps = 85/798 (10%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARI 71 G VQGVGFRPFV++LA++L L G V NDG GV++ + + +L + PPLAR+ Sbjct: 21 GVVQGVGFRPFVYRLARELGLAGWVRNDGAGVDIEAQGSAAALVELRERLRRDAPPLARV 80 Query: 72 DSVEREPFIWSQLPTEFTIRQST--GGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 D + E F I +S+ ++T I D A CP CLAE+ P RRYRY FI Sbjct: 81 DEIGEERCAAQVDADGFAILESSRSDAAVHTAIGHDTAVCPDCLAELFDPANRRYRYAFI 140 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 NCT CGPR+T+ A+PYDR T MA FP C C EY P RRFHA+P ACP+CGP L Sbjct: 141 NCTQCGPRYTLTWALPYDRATTSMAPFPQCRPCLDEYNAPEHRRFHAEPNACPDCGPSLA 200 Query: 190 WV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + + G E + +A+L+ G+IVAIKG+GGFHLACDA N++AVA LR+RK R K Sbjct: 201 LLNAQGMPVEDVDPIAETVARLQRGEIVAIKGLGGFHLACDAHNADAVARLRSRKQREEK 260 Query: 249 PLAVMLPVADGLPDAAR---------QLLTTPAAPIVLVDKKY-VPELCDDIAPDLNEVG 298 P AVM+ L AA+ LLT PIVL+ K+ V +AP L +G Sbjct: 261 PFAVMVA---NLATAAQWGDIGSGEAALLTASERPIVLLRKRSGVDGRFAGVAPGLVWLG 317 Query: 299 VMLPANPLQHLLLQE----------LQCP----LVMTSGNLSGKPPAISNEQALADLQGI 344 VMLP PLQ+LL E L P LVMTS N G+P N++A L GI Sbjct: 318 VMLPYTPLQYLLFHEAAGRPEGLGWLAQPQSLVLVMTSANPGGEPLVTGNDEAAQRLTGI 377 Query: 345 ADGFLIHNRDIVQRMDDSVVRESGE------MLRRSRGYVPDALALPPGFKNVPPVLCLG 398 AD FL+H+R+I+ R DDSVVR GE +RR+RGY P A+ L ++ P VL LG Sbjct: 378 ADAFLLHDREILVRCDDSVVRGDGEPAPHVQFIRRARGYTPRAIKLA---RSGPSVLALG 434 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 KNT CL RG++A +SQH+GDL + EA+ +Q + + PQ V HD HP + Sbjct: 435 GSFKNTVCLTRGDEAFVSQHVGDLGNAATCEALIEAVAHLQRVLEIRPQLVAHDLHPDFF 494 Query: 459 SSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGD--VIALTLDGIGMGENGAL 512 S++ A E+ +P V HHHAH AA LAEH G D I L LDG+G+G++G Sbjct: 495 STRHAAELAAQWGVPAVAVQHHHAHIAAVLAEH-----GSDEPAIGLALDGVGLGDDGQA 549 Query: 513 WGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ 572 WGGE L V+ C+ LG L + LPGGD AA++PWR + A L + + E +Q Sbjct: 550 WGGELLLVDGGACKRLGHLRELPLPGGDRAAREPWR-MAAAALHAMGRGEEI-EGRFPRQ 607 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC--- 629 ++ R + + +NAPL+SS GR+FDA A LG T++YEG+AA LE LA S Sbjct: 608 PGAPMVNRMLAQRLNAPLSSSMGRWFDAAAGLLGTR-ETMAYEGQAAMLLEGLAESWGEQ 666 Query: 630 ------HGVTHPVT-MPRVD----NQLDLATFWQ-------------QWLNWQAPVNQRA 665 V H + +PR L L W+ + L+ + + A Sbjct: 667 PSPGRPKTVAHSLGGVPRSGGGTYKALALPDAWRIDAGNTLDLLPLLEALSAETNAARGA 726 Query: 666 WAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSL 723 FH L A + G+ T+VF GG N +L L LA T+L + L Sbjct: 727 AQFHATLVAALEAWTVATVQVTGVRTVVFGGGCFLNHILARNLCRRLAARGLTVLTARQL 786 Query: 724 PAGDGGLSLGQGVIAAAR 741 P DGG++LGQ +A R Sbjct: 787 PPNDGGIALGQVWVALQR 804 >UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Synergistaceae RepID=C1TMC9_9BACT Length = 753 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 296/759 (38%), Positives = 420/759 (55%), Gaps = 38/759 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ + G VQGVGFRPF +LA L L G V N DGV + LR + ++ L P Sbjct: 5 EILVTGVVQGVGFRPFCAKLASSLGLGGSVINSSDGVVIVLRGTERSIDNYIKNLKDTKP 64 Query: 67 PLARIDSVE--REPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 A I S+ E LP F I +S ++P D TC CLAEM P +RR Sbjct: 65 DPADIHSITIISERKTDGDLPGAFVIGKSRRTERQRVLIPPDIGTCDRCLAEMRDPSDRR 124 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT CGPRF+I+ +PYDRP T M+ FP+C C+ EY D +RR+HAQP AC + Sbjct: 125 YRYPFINCTDCGPRFSIVSGLPYDRPKTTMSIFPMCDRCNGEYTDQENRRYHAQPNACAD 184 Query: 184 CGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + + + GE +E + LK GK+VAIKG+GGFHLACD V+TLR R Sbjct: 185 CGPSVWFQTELGEPYLREDGIGRCREYLKAGKVVAIKGLGGFHLACDPFEDTPVSTLRHR 244 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP KPLA+M + + + +LL + PIVL +KK + + +AP N Sbjct: 245 KGRPDKPLAIMAESLESAREIALISEEEARLLKSSRRPIVLCEKK-TGSVAESVAPGQNS 303 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 VG+MLP PL HL+L+ ++ LVMTS N + P NE+AL+ L +ADGFL+HNRDI Sbjct: 304 VGIMLPYTPLHHLILEGMRA-LVMTSANPTDSPLISDNEEALSRLAHVADGFLMHNRDIC 362 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 ++DDS+V SG+ MLRR RGYVP+ + L ++P +L GA++K+TF L + Sbjct: 363 MKVDDSLVALSGDRTVMLRRGRGYVPNPIDLS---ISMPHILAAGAEMKSTFSLTQEGLI 419 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ-- 471 SQ+LGD +R+ L +Y+ P+ + +DAHP Y+S+Q A + + Sbjct: 420 FPSQYLGDAKQMDTLGYYRQTLDHFTELYNIRPKALAYDAHPLYLSTQTALKALGEVERS 479 Query: 472 -TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAH AACLAE+ I + +DG G G +G +WGGE L ++ LG Sbjct: 480 MAVQHHHAHLAACLAEYDI---NEPTIGVIMDGTGYGSDGTIWGGEFLLGDWSGYRRLGH 536 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN-AP 589 LPGGD + +PWR L+ + E + E + + Q+ S A+ I + +N +P Sbjct: 537 FKTAGLPGGDRSVLEPWRYSLSLLTEALGEEEAIKEASRIWQER-SEKAKIIVKTMNSSP 595 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT 649 L SSCGR FD V+A LG +SY+G+AA LEA ++ + PV M +++ + Sbjct: 596 LTSSCGRLFDGVSAILG-GRDRVSYDGQAAMELEARSSYTDEI--PVDMGIWNDEDGIIL 652 Query: 650 FWQQWLNW----QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 W+ ++ W + ++Q AFH +LA+ + + A G+ + SGGV NR+L Sbjct: 653 DWRPFIRWLVEEKPTLDQGGSAFHASLAKSISEICTNIAKDTGVKKVALSGGVWQNRMLL 712 Query: 706 ARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 + L F++L + L D +S+GQ IA RW Sbjct: 713 RQTVVRLEGRGFSVLTHRRLSPNDESVSVGQAAIAGWRW 751 >UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCQ3_PELPB Length = 849 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 314/833 (37%), Positives = 424/833 (50%), Gaps = 105/833 (12%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 +LR+ G VQGVGFRPFV++LA +L G +CN GV + ++ F +L P Sbjct: 25 RLRVNGMVQGVGFRPFVYRLAVACDLKGFICNTASGVLIEVQGQLSLLNEFSRRLLGERP 84 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA I+++E +G + T I PD A C C E+ P RR+RY Sbjct: 85 PLAFIETIEEMSLPCVSEEAFLIGNSGSGVGVETLIPPDIALCSDCRRELLDPANRRFRY 144 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TI+ +PYDRPFT M F +C AC++EY DPLDRRFHAQP ACP CGP Sbjct: 145 PFINCTNCGPRYTIVDRLPYDRPFTSMHGFTMCEACEREYHDPLDRRFHAQPNACPVCGP 204 Query: 187 HLEW-------------VSHG-----EHAEQEAALQ-----------AAIAQLKMGKIVA 217 L V H HA+ + AL A+A L+ G IVA Sbjct: 205 TLSLFDASGTLLLGESVVEHNPVDGTSHAQPKTALSCAHTLSGDVVAEAVAFLRRGMIVA 264 Query: 218 IKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML---PVADG---LPDAARQLLTTP 271 +KG+GGFHLA DARN AV LR RK R AKP AVM+ + G + + L+ Sbjct: 265 LKGLGGFHLAVDARNEAAVRRLRERKGREAKPFAVMIRDRSLVHGYCEVSETEMAALSAA 324 Query: 272 AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPA 331 APIVL+ KK L IAP +GVMLP PL LL E LVMTS N S +P A Sbjct: 325 QAPIVLLKKKKSSNLAPSIAPGNERLGVMLPYTPLHTLLFDETLDILVMTSANFSEEPIA 384 Query: 332 ISNEQALADLQGIADGFLIHNRDIVQRMDDSV-VRESGEM--LRRSRGYVPDALALPPGF 388 NE+AL L+GIAD FL+HNR I + DDSV + SG + LRRSRGYVP + L Sbjct: 385 SENEEALLRLKGIADAFLVHNRPIYLKCDDSVTIALSGTLRQLRRSRGYVPAPIYLR--- 441 Query: 389 KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQY 448 ++ P VL G +LKNT +++G A++SQH+GD+ + + + + +Q+++ P+ Sbjct: 442 EDGPVVLAAGGELKNTITILKGSHALMSQHIGDMKNYEAYRHFVQVVAHLQHLFQAVPKL 501 Query: 449 VVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 +VHD HP Y+++QWA N+P V HHHAH +CLAE++ + G I L LDG G G Sbjct: 502 LVHDLHPAYMTTQWAMMQNIPLLGVQHHHAHLVSCLAENR---EEGPAIGLILDGTGYGT 558 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 +G +WGGE L + L + LPGG+ A PWR L R P+ + Sbjct: 559 DGTIWGGEVLIGDAAGAARFASLELMPLPGGEAAVMHPWRAALGYLHRSCPDLPDLP--- 615 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 ++ ++ + +++ + SSCGR FDAV AAL +SYEGEAA AL A Sbjct: 616 FMKGRSIEPVLELLQKRVTIVETSSCGRLFDAV-AALCALRGEISYEGEAAIALMHEAGG 674 Query: 629 CHG----------------------------------VTHPVTMPR--VDNQLDLATFWQ 652 G + PR + N+ DL + Sbjct: 675 SMGSKSFRYGLHYEQKPALAPVQSAGGTIGTNDIPAVTERLINTPRGTIANKHDLLHEEK 734 Query: 653 -QWLNWQAPV--------------NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 +W +P+ + + FH L F ++ + + GITT+ SGG Sbjct: 735 GRWTMLVSPIIRDVVTALQTGMAAGEISRRFHRTLVNCFYEIIGKASKATGITTVALSGG 794 Query: 698 VIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 V N LL L L A + +L +P+ DGGLSLGQ +I +L G Q Sbjct: 795 VFQNALLFEALVTELQRAGYKVLTQALVPSNDGGLSLGQALIGRT-YLNGNYQ 846 >UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQG6_LAWIP Length = 796 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 295/781 (37%), Positives = 425/781 (54%), Gaps = 61/781 (7%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPPLA 69 I+G+VQGVGFRPFV+ A +L L G V N GV + ++ D F + P +A Sbjct: 19 IKGRVQGVGFRPFVYCTATKLGLTGKVKNTIYGVWIEVQGDDSKLNIFKEMITNEKPSIA 78 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRYPF 128 + S+ + + TEF I +S+ G T ++ PD ATC C+ E+NT + RY+YPF Sbjct: 79 QFTSITMQSLGFQDKETEFLIEESSDGIQYTSLISPDIATCEYCVKELNTTTDHRYQYPF 138 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+CT CGPR+TII PYDR T M++FP C C+KEY + LDRRFHAQ ACP CGP L Sbjct: 139 ISCTLCGPRYTIIHKAPYDRHHTSMSSFPFCFTCEKEYNNSLDRRFHAQSNACPTCGPQL 198 Query: 189 EWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 H A+ AI + GKI+A+KGIGGFHL CDA N++ V TLR RK+RP Sbjct: 199 WLTDHDNRYITYNSEAILLAIEYIYKGKIIAMKGIGGFHLICDATNADVVNTLRYRKNRP 258 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVP-ELCDDIAPDLNEVGV 299 KPLAVM+P + + + Q + +P PIV++ K +P L +IAPD++ +G+ Sbjct: 259 DKPLAVMVPNINIARQIAYISEVEIQKMQSPECPIVIL--KAIPHSLPKNIAPDVSTIGL 316 Query: 300 MLPANPLQHLL---------LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 MLP PL H+L L+ + LVMTS N+SG +N+ AL L I D FL Sbjct: 317 MLPYTPLHHILCNTLTKVAELERIIPALVMTSANVSGGTIIYNNDDALIRLNTITDFFLF 376 Query: 351 HNRDIVQRMDDSVV--RESG-------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 HNR+I+ +DDSVV RE +RR+RGY P + + N P ++ LGA+ Sbjct: 377 HNRNIIVPVDDSVVCLREDNIGQSPNWHFIRRARGYAPLPITVKTLKDNTPCIIALGAEH 436 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K+TFC RG+ LSQH+GDLS+ + + + ++ + ++ F+P+ VV D HP Y +++ Sbjct: 437 KSTFCFTRGQDIFLSQHIGDLSEPETEWSFCQTVKHISQLFGFSPEVVVCDLHPDYFTTR 496 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV- 520 +A E LP + HH AH + LAEH + LTLDG G G +G +WGGE + Sbjct: 497 YAAEFGLPILQLQHHIAHGYSVLAEHG---HKEPALVLTLDGTGYGMDGTIWGGELFYLY 553 Query: 521 -------NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ- 572 +Y + E L L + LPGG+ A +PWR LL+ L + + + V+Q Sbjct: 554 PEAVKGKSYEQGERLARLSLLPLPGGEKAIHEPWR-LLSGFLALLKIHELEGVDSLVRQL 612 Query: 573 -----QNWSVLA--RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 + W++ + R + L SSCGR FD V+ G ++YEG+AA LE Sbjct: 613 WKNSPERWTIHSAIREMVSKDKVKLTSSCGRLFDTVSTLFGLCDY-ITYEGQAAIRLEHQ 671 Query: 626 A-ASCH-GVTHPVTMPRVDNQLDLATFWQ---QWLNWQAPVNQRAWAFHDALAQGFAALM 680 SC+ +T + +LD F + + L + V+ A FH L +G A L Sbjct: 672 QDMSCNESLTISIVEKDSIYELDTTVFLKELIELLQQKISVSILARRFHIGLVEGLADLA 731 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 + G+ T+ SGGV++N+ + + L L T L +++P+GDGG+S GQ A Sbjct: 732 LIGSENTGVKTVGLSGGVLNNQTISSLLPKALRYRGLTPLMHKNVPSGDGGISFGQAYWA 791 Query: 739 A 739 + Sbjct: 792 S 792 >UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Chroococcales RepID=C7QNJ8_CYAP0 Length = 780 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 305/786 (38%), Positives = 418/786 (53%), Gaps = 63/786 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 ++L I G VQGVGFRPF+++LA +L L G V N GV + + E+ E FL+++ Sbjct: 6 LKLVISGAVQGVGFRPFIYRLATELKLTGWVNNSASGVFIEVEGSLENLENFLLKIPTEK 65 Query: 66 PPLARIDSVEREPFIWSQLP--TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP ++I S+E W F IR S G ++PD ATC CL E+ P RR Sbjct: 66 PPRSQIQSIET---TWLDCIGYNSFEIRYSVSGEKTAIVLPDLATCSDCLNEIFDPNNRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NCT+CGPR++II A+PYDR T M F +C C +EY +P DRRFHAQP ACP Sbjct: 123 YGYPFTNCTNCGPRYSIIEALPYDRSQTTMKGFMMCCECQQEYENPRDRRFHAQPNACPC 182 Query: 184 CGPHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L W +HGE A Q AL+ A +K GKI+AIKG+GGFHL D N AV LR Sbjct: 183 CGPQLALWNAHGEVLANQNLALKMAANAIKEGKILAIKGLGGFHLMVDGSNHTAVEELRQ 242 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKK-YVPELCDDIAPDL 294 RK RP KP A+M P D + QLLT+P APIVL+ +K + L +AP+ Sbjct: 243 RKRRPHKPFALMYPSLDSAKSHCEISLLEEQLLTSPEAPIVLLKRKPHTINLWPFVAPNN 302 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 GVMLP PL HLLL +L PLV TSGNLS +P I +AL L IAD FL+HNR Sbjct: 303 PYWGVMLPYTPLHHLLLSDLNFPLVATSGNLSDEPICIEEGEALQRLSPIADLFLVHNRP 362 Query: 355 IVQRMDDSVVRESG--EM-LRRSRGYVPDALALPPGFKN------------------VPP 393 I++ +DDSVVR G EM LRR+RGY P + + P Sbjct: 363 ILRPVDDSVVRIMGGREMILRRARGYAPFPIMKSESRRKKLISLPTLPLTPSPPHPLSPS 422 Query: 394 VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDA 453 +L G LKNT ++R Q +SQH+GDLS + + + ++ +YDF PQ +V DA Sbjct: 423 LLATGGHLKNTVAILRDNQVFISQHIGDLSTSEALGAFYQVMDSLKGLYDFEPQIIVCDA 482 Query: 454 HPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALW 513 HP Y+SSQ+A+ +LP V HH+AH +C+ E V+ + DG G G++G +W Sbjct: 483 HPDYLSSQFAQSQSLPVIKVQHHYAHILSCMTEQGVK---SPVLGVAWDGTGYGDDGTIW 539 Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASV 570 GGE L + + + LPGGD A K+P R LA + + +N Sbjct: 540 GGEFLLITEGNYQRVAHFQPFKLPGGDRAVKEPRRIALALIYQIFESFDGLENLPLFDHF 599 Query: 571 QQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH 630 + +++ + + R +N P+ SS GR FD VA+ LG +S+EG+ A ALE + Sbjct: 600 SIRELNLIKQMLSRNLNTPITSSVGRLFDGVASLLGIC-QDISFEGQGAIALEYVIGDLQ 658 Query: 631 -GVTHPVTMPRVDNQLDLATFWQQ--------WLNWQAPVNQRAWAFHDALAQGFAALMR 681 +P + ++ L L W+ L+ P + + FH+ L + + Sbjct: 659 TNAIYPYEI--LEETLPLVINWESIVRGILADLLDNLKP-GEISAKFHNTLVEIIINIAE 715 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 + + + I T GG N+ L R L +FT ++ Q +P DGG+SLGQ + A Sbjct: 716 KISQKKVIVT----GGCFQNKYLTERAIKRLIQENFTPVWHQKVPPNDGGISLGQIMAAV 771 Query: 740 ARWLAG 745 R G Sbjct: 772 TRLELG 777 >UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 Tax=Chlorobiaceae RepID=B4S9J1_PROA2 Length = 778 Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust. Identities = 307/755 (40%), Positives = 423/755 (56%), Gaps = 36/755 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDP---ETFLVQLYQH 64 ++L + G VQGVGFRP+V++LA L L G + N GV + ++ E P E F+ +L Sbjct: 20 LRLAVNGIVQGVGFRPYVYRLATSLGLSGSIRNTASGVLIEVQAETPLLLERFVQELGSE 79 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERR 123 PPLA I SV + I +Q F I S G + T I PD A C C +E+ P +RR Sbjct: 80 APPLAEIFSVVADE-IPAQSGNGFVILSSDDGEDVETLIPPDIALCDDCRSELLDPLDRR 138 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRY FINCT+CGPRF+I+ +PYDRP T M F +C C +EY +PLDRRFHAQP ACP+ Sbjct: 139 YRYAFINCTNCGPRFSIVERLPYDRPLTSMKGFTMCEKCGREYGNPLDRRFHAQPNACPD 198 Query: 184 CGPHLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP L+ + + GE L A+ +LK G IVA+KG+GGFHLA DA + +AV LR R Sbjct: 199 CGPALQLLDAGGEPINAPDPLSLALQKLKDGDIVAVKGVGGFHLAVDATDQSAVMNLRER 258 Query: 243 KHRPAKPLAVM---LPVADG---LPDAARQLLTTPAAPIVLVDKKYVPE-LCDDIAPDLN 295 K R KP AVM L A+ + D R L + AP+VL+ KK L D+AP + Sbjct: 259 KGRERKPFAVMARSLGSAEKVAQVSDEERVALRSLQAPVVLMHKKASASLLAPDVAPAND 318 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +G+MLP +PL L+++E LVMTS N S +P A+ N++A++ LQGIAD FL+HNR I Sbjct: 319 RIGLMLPYSPLHVLMMEEGPEFLVMTSANSSEEPIALENDEAVSRLQGIADYFLVHNRPI 378 Query: 356 VQRMDDSVVR-ESGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 R DDSV SG + +RR RGY P + L + P VL G ++KNT C+++G Q Sbjct: 379 HLRCDDSVTMVMSGALRQIRRGRGYAPLPVLLS---SDGPSVLAAGGEMKNTVCVLQGSQ 435 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-EMNLPTQ 471 A+LSQH+GDL + +++ MQ+I+ P+ ++ D HP Y+S+QWA+ + ++P Sbjct: 436 ALLSQHIGDLKNYVAYEHFQQVAEHMQHIFQVRPEAIISDMHPSYLSTQWAQNQSDIPVL 495 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH +CLAE+++ G + + LDG G G +G +WGGE L + L Sbjct: 496 HVQHHHAHLVSCLAENRF---DGQAVGIILDGTGYGTDGTVWGGEVLIGDASGFFRFASL 552 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 V +PGGD AA PW+ A + + E A+ + +A + R +NAP A Sbjct: 553 EPVRMPGGDRAALFPWK---AAAGYLFHTYGHIPEIAAFEGCFVEGIADLLARQVNAPPA 609 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG--VTHPVTMPRVDN-QLDLA 648 SSCGR FDAV+A G +SYEG+AA L A G V D L +A Sbjct: 610 SSCGRLFDAVSALCGLC-REISYEGQAAIELMHAAGIAEGKPFAWEVVSAGSDRWHLSVA 668 Query: 649 TFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 Q L V+ + FH + + F+ + G+T++ SGGV N L+ Sbjct: 669 PMVQDIVTALGSAMSVSDISRRFHVTIVKMFSDIALRACRFSGLTSVALSGGVFQNPLVF 728 Query: 706 ARLAH--YLADFTLLFPQSLPAGDGGLSLGQGVIA 738 L L +L +P+ DGGLSLGQ VI Sbjct: 729 EGLVSDLQLHGIEVLTHSQVPSNDGGLSLGQAVIG 763 >UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis sp. PCC 6803 RepID=HYPF_SYNY3 Length = 767 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 315/768 (41%), Positives = 426/768 (55%), Gaps = 59/768 (7%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 V ++++G+VQGVGFRPFV+ LAQ++ L+G V N G V + D + F +L + Sbjct: 5 VAIQVQGRVQGVGFRPFVYTLAQEMGLNGWVNNSTQGATVVITADEKAIADFTERLTKTL 64 Query: 66 PPLARIDSVEREPFIWSQLP----TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 PP I+ + E QLP T FTIR S+ G I+PD +TC ACL E+ P + Sbjct: 65 PPPGLIEQLAVE-----QLPLESFTNFTIRPSSDGPKTASILPDLSTCSACLTELFDPSD 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPFINCTHCGPR+TII A+PYDR T MA F C C++EY+ P DRRFHAQP AC Sbjct: 120 RRYLYPFINCTHCGPRYTIIEALPYDRCRTTMARFRQCTDCEREYKQPGDRRFHAQPNAC 179 Query: 182 PECGPHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P CGP L W G+ AE AL A+ LK+G I+AIKG+GGFHL CDA + AV L Sbjct: 180 PRCGPQLAFWNRQGQVIAEANEALNFAVDNLKVGNIIAIKGLGGFHLCCDATDFEAVEKL 239 Query: 240 RARKHRPAKPLAVMLP-----VADGLPDAAR-QLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHRP KPLAVM V P+ +LL + AAPIVL++KK L ++IAP Sbjct: 240 RLRKHRPDKPLAVMYGNLGQIVEHYQPNNLEVELLQSAAAPIVLLNKKKQLILVENIAPG 299 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 VGVML PL HLLL++L+ P+V TSGNL+G+ I N AL LQ IADGFL+H+R Sbjct: 300 NPRVGVMLAYTPLHHLLLKKLKKPMVATSGNLAGEQICIDNIDALTRLQNIADGFLVHDR 359 Query: 354 DIVQRMDDSVVR-ESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 IV +DDSVV+ +G+ LRR+RGY P + LP + +L +G KNT + + Sbjct: 360 PIVCPVDDSVVQIVAGKPLFLRRARGYAPQPITLPKPTQK--KLLAMGGHYKNTVAIAKQ 417 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 QA +SQHLGDL+ + EA+ + +YDF+PQ +V D HP Y S Q+A LP Sbjct: 418 NQAYVSQHLGDLNSAPTYQNFEEAIAHLSQLYDFSPQEIVADLHPDYFSHQYAENQALPV 477 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH+AH A +AEH + V+ + DG G G +G +WGGE L++ + + Sbjct: 478 TFVQHHYAHILAVMAEHG--VMEESVLGIAWDGTGYGMDGTIWGGEFLKITQGTWQRIAH 535 Query: 531 LPAVALPGGDLAAKQPWR----------------NLLAQCLRFVPEWQNYSETASVQQQN 574 L L G A K P R + L L F ++N + Q N Sbjct: 536 LQPFHLLGNQQAIKYPHRIALALLWPTFGDDFSADSLGNWLNFNNGFKNKINSRLNQDLN 595 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA-LAASCHGVT 633 L + +RG APL SS GR FD +A +G +++EG+AA ALEA + + Sbjct: 596 NKNLRQLWQRG-QAPLTSSMGRLFDGIATLIGLI-NEVTFEGQAAIALEAQIMPNLTEEY 653 Query: 634 HPVTMPRVDNQLDLATFWQQWLNW-----QAPVNQRAWAFHDALAQGFAALMREQATMRG 688 +P+T+ + + LA W+ + ++ N A FH++L + ++Q G Sbjct: 654 YPLTLNNKEKK--LAVDWRPLIKAITTEDRSKTNLIATKFHNSLVNLIITIAQQQ----G 707 Query: 689 ITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 I + GG N L A L A F+ L+P+ LP DG + +GQ Sbjct: 708 IEKVALGGGCFQNCYLLASTITALKKAGFSPLWPRELPPNDGAICMGQ 755 >UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Tax=Cyanobacteria RepID=A8ZNU8_ACAM1 Length = 834 Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust. Identities = 311/808 (38%), Positives = 444/808 (54%), Gaps = 83/808 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHC 65 +QL I+G VQGVGFRPF+++LA +L L G V ND GV + + PE FL QL + Sbjct: 16 LQLTIQGAVQGVGFRPFIFRLATRLKLRGWVSNDTQGVVIEVEGGPERLNQFLAQLQANP 75 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 P LA I++++++ I FTIR S G T ++PD ATC CL E+ P +RRYR Sbjct: 76 PVLAEIETIKQK-CIPPLGEHTFTIRPSQNGPKTTLLLPDVATCADCLRELFNPSDRRYR 134 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCTHCGPR++IIRA+PYDR T MA+F +CP C EY++PL RRFHAQP+ACP CG Sbjct: 135 YPFINCTHCGPRYSIIRALPYDRGNTAMASFHMCPDCLSEYQNPLSRRFHAQPIACPTCG 194 Query: 186 PHLE--------WVSH--------------GEHAEQEAALQAAIAQLKMGKIVAIKGIGG 223 P +E WVS+ E E A+ A L+ G IVA+KG+GG Sbjct: 195 PIVEVGYWQKERWVSNQLQGQAVQQNQEGIAEKTEGLGAIGLAAVALRQGLIVAVKGVGG 254 Query: 224 FHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVL 277 FHL DARNS+AV LR RK RP KP A+M P + + +LL +P APIVL Sbjct: 255 FHLLVDARNSDAVKRLRTRKKRPNKPFALMYPSLERVKHTCEVSELEAELLQSPKAPIVL 314 Query: 278 VDKKYVP---ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN 334 + ++++ + D++AP + +GV+LP P+ HLL+ +L P+V TSGNL+G P + + Sbjct: 315 LQRRHLSLADPIADEVAPGCSHLGVLLPYTPIHHLLMADLDFPIVATSGNLNGAPISFNG 374 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALAL------- 384 E+AL DL+ IAD FLI NR I+ +DDSVV+ ++ RR+RGY P L++ Sbjct: 375 EKALDDLKSIADLFLIQNRPILHPIDDSVVQVINGQTQLRRRARGYAPLPLSVTFPSHHS 434 Query: 385 -PPGFKNV---------PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREA 434 P G P +L +G+ LKNT L + +SQHLGDL ++++ Sbjct: 435 SPKGLSATPQSTRPPKRPTILAVGSHLKNTIALSLDDHVFMSQHLGDLDTVPSIDRFQQT 494 Query: 435 LRLMQNIYDFTPQYVVHDAHPGY----VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWP 490 L+ + +Y+ P V DAHP Y + A++ +P +V HH+AH AC+AE Sbjct: 495 LQALLQLYECQPNLVACDAHPDYASTQAAQALAQQWQVPLLSVQHHYAHVLACMAEQHL- 553 Query: 491 LDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRN- 549 V+ + DG G G + +WGGE L++ E +G LPGGD AA++P R Sbjct: 554 --AAPVLGIAWDGAGYGLDETVWGGEFLQITPTGFERVGYWRPFFLPGGDQAAREPRRTA 611 Query: 550 --LLAQCL-RFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG 606 LL C + EW+ + + Q + VL ++R +N PL SS GRFFDA+ A+L Sbjct: 612 MGLLYTCFGGEIFEWEGLAPLKAFSQPSAQVLQSMLDRSLNTPLTSSVGRFFDAI-ASLT 670 Query: 607 CAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWL-NWQAPVNQ-- 663 T +EG+AA ALE++ T + + L W+ L A ++Q Sbjct: 671 DLMQTTHFEGQAAMALESILGRV--ATEDDYPFHLSSSLPFVMDWEPMLIAILADIDQGV 728 Query: 664 -RAW---AFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTL 717 +W FH+ L + ++ + A G +V +GG N+ L + H L + + Sbjct: 729 DTSWISTKFHNTLVE----IIVQIAHQIGEPYIVLTGGCFQNQYLSEKAIHRLRENQYRP 784 Query: 718 LFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + Q +P DGG++LGQ ++AA R AG Sbjct: 785 YWHQQVPTNDGGIALGQ-IMAAHRHYAG 811 >UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legionella pneumophila RepID=A5IEY4_LEGPC Length = 741 Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 299/771 (38%), Positives = 425/771 (55%), Gaps = 74/771 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP-ETFLVQLYQHCPP 67 VQ+ I+G VQGVGFRP V++LA+Q+ L G V N+ GV + ++ + F+ +L + PP Sbjct: 6 VQISIQGLVQGVGFRPCVYKLAKQMELTGFVQNNASGVLIEIQGNYLSQFIPKLREQLPP 65 Query: 68 LARIDSVEREPFIWSQLPT-----EFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 LA I ++E ++ LP F I S G +NT I PD C CL E+ P R Sbjct: 66 LAAIHNLE-----FTSLPIVPNERAFEILDSQQGKINTVITPDVCICSECLGELFDPQSR 120 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 YRYPF+NCTHCGPRFTI R +PYDR T M+ FPLC +C +Y +P +RR+HAQP AC Sbjct: 121 YYRYPFLNCTHCGPRFTITRNLPYDRCQTSMSQFPLCQSCQSDYLNPDNRRYHAQPTACS 180 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 +CGP L ++ +++ G+I+A+KG+GG+ L CDARN A++ LR R Sbjct: 181 QCGPQLAL-----------SVDKVAQRIRDGEIIALKGLGGYQLICDARNEGAISQLRLR 229 Query: 243 KHRPAKPLAVML-------PVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 K R AKP A+M+ +A+ P AR +L + PIVL+ KK L D IAP LN Sbjct: 230 KSREAKPFALMVVNAKSAEKIAEVSPQ-ARLVLESRERPIVLLRKKKA-LLPDGIAPGLN 287 Query: 296 EVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAISNEQALADL 341 G+MLP+ PL +LL LV+TS N+ G+P I +++A L Sbjct: 288 HFGIMLPSTPLHYLLFNSFLGNPDYCQWLDEYHSMVLVVTSANIGGEPLIIDDKKAEQGL 347 Query: 342 QGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLG 398 IAD + H+R+I+ R DDSVVR ++ ++RR+RGYVP L LP +PP + LG Sbjct: 348 ISIADKIISHDREIITRTDDSVVRMVNDTSVLIRRARGYVPAPLRLP---YEIPPTVALG 404 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 LKNTFC+ RGE+A +SQH+G L++ + E+L + P+ + HD HP + Sbjct: 405 GHLKNTFCITRGEEAFVSQHIGSLNNKATIEYFHESLNHLLKFLAVKPERIAHDWHPDFY 464 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGE 516 +S+ A++ ++P V HHHAH A+ +AEH Q P V+ L LDG G G +G WGGE Sbjct: 465 TSRLAQKYDIPVYGVQHHHAHLASVVAEHGIQEP-----VLGLVLDGYGFGSDGEAWGGE 519 Query: 517 CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWS 576 L + E + +G + PGG+LAA++PWR + A L + S+ Q Q+ Sbjct: 520 LLLLEKAEFKRVGHFFPIPQPGGELAAREPWR-MAAGILHILGRGDEISQRFKEQPQS-P 577 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 L + +E+ I+ PL +SCGR FDAV+A LG + +EG AA LE++ VTHP Sbjct: 578 FLLQLLEKKIHCPLTTSCGRLFDAVSALLGVEFLS-RFEGHAAMRLESM------VTHPQ 630 Query: 637 TMPR----VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + + DN D+ Q N A FH L G + + +GI L Sbjct: 631 VLNKGWTINDNVFDMRPTLQFIAN-TTEQQLGANLFHGTLIAGLSEWVTGICREKGIHML 689 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + SGG N++L L + L + L P+ LP DGG++LGQ I + Sbjct: 690 LLSGGCFLNQVLAEGLINSLIKSGIKPLLPKLLPPNDGGIALGQAWIVGIK 740 >UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVY1_SYNAS Length = 778 Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 305/758 (40%), Positives = 419/758 (55%), Gaps = 42/758 (5%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLARI 71 G VQGVGFRP+++++A +L G VCN +GV + E FL + + PP A + Sbjct: 26 GIVQGVGFRPYIYRMATNYSLGGFVCNIPEGVVAEVEGTAPQIEAFLSAVPKELPPAAAL 85 Query: 72 DSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFIN 130 ++ + TEF I S G I PD A C CL E PG+RRYRYPFIN Sbjct: 86 TALSNTD-VSLLGETEFQIISSRAEGNKAVLIAPDIAVCENCLREFRDPGDRRYRYPFIN 144 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW 190 CT CGPR TIIR +PYDR T MA FPLCP C EY +P +RRFHA+P ACP CGP L W Sbjct: 145 CTDCGPRLTIIRDVPYDREKTSMACFPLCPQCRAEYENPANRRFHAEPNACPSCGPKL-W 203 Query: 191 VSHGEHA----EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 ++ + + AI L GKI+A+KG+GGFHLA DA + AV LR+RK+R Sbjct: 204 LTDENGTPFSDDFNDPIAKAIELLSKGKILAVKGLGGFHLAVDATDEGAVRRLRSRKYRE 263 Query: 247 AKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 KPLAVM+ + + D R+LL +P PIVL K+ E+ +AP + + G+M Sbjct: 264 EKPLAVMVRDLEAASKIAEIGDRERKLLFSPQRPIVLCRKRGAKEIAPSVAPGVPDRGIM 323 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL +LLL+ LVMTS N S +P I N +AL L+GIAD +L+HNRDI+ R D Sbjct: 324 LPYTPLHYLLLENTLSALVMTSANQSDEPICIGNREALKRLKGIADAYLLHNRDILVRCD 383 Query: 361 DS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DS V + M+RRSRGY P + P ++ P VL LG LK T C+++G A LS Sbjct: 384 DSVATVTQGKTFMIRRSRGYAPKPI---PLLRSCPNVLALGPQLKTTLCILKGNLAYLSP 440 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL--- 474 H+GD+ + +E+L+LM+ I P + D HP Y +++ A E LP +TVL Sbjct: 441 HIGDMDTPEARKFHQESLQLMERIAQCRPDVLACDLHPAYYTTRLAEE--LPHRTVLRIQ 498 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HHHAH + +AE+ G VI L +DG G G +G WG E L + + + G L Sbjct: 499 HHHAHIVSAMAENGL---TGKVIGLAMDGTGYGTDGTAWGCEFLLADEVDFQRAGHLRPY 555 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPE-WQNYSETASVQQQ--NWSVLARAIERGINAPLA 591 LPG D A ++PWR ++ E W+ + ++ ++ +L + + G+N+P Sbjct: 556 PLPGSDRAVREPWRAAVSLLRESYGEFWREIAGNLPLKDHAPHFELLDKMMAHGLNSPPT 615 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-QLDL--- 647 SS GR FDAVAA LG +++EG+AA ALEA+A++ T+ + D LDL Sbjct: 616 SSLGRVFDAVAALLGIR-QVVNFEGQAAMALEAMASAPAEKTYTFDIFEGDRIVLDLRPL 674 Query: 648 -ATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 Q+ L+ + P + A FH L++ AA+ + GI V SGG NR+L Sbjct: 675 IRAIVQEQLSGREP-QKIASDFHRTLSRALAAVTAKIRMRTGIEKAVLSGGCFQNRILLD 733 Query: 707 RLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAARW 742 +A L F + + LP DG ++LGQ V AAAR Sbjct: 734 SVARELEQEGFAVYLHRDLPPNDGCIALGQAVAAAARM 771 >UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V377_9PROT Length = 772 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 322/784 (41%), Positives = 419/784 (53%), Gaps = 69/784 (8%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFL 58 A T C ++R+ G+VQGVGFRPFV++LA +L L G V ND GVE+ + RE + Sbjct: 7 AGMTVCA-KIRVSGQVQGVGFRPFVYRLAHELALAGWVRNDSCGVEICVEGERERILNLI 65 Query: 59 VQLYQHCPPLARIDSVERE--PFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEM 116 +L P LARI+ V E P ++ F+I S GG M T I PD A CP CLAE+ Sbjct: 66 ARLQSEPPKLARIEQVSYELTPQVFDV--QGFSILASRGGVMQTSIAPDMAICPDCLAEL 123 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RRYR+ FINC HCGPR+T+ R MPYDR T M F CPAC +EY DP RRFHA Sbjct: 124 FNPADRRYRHAFINCIHCGPRYTLTRRMPYDRANTSMDKFVQCPACQREYDDPETRRFHA 183 Query: 177 QPVACPECGPHLE-WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 QP ACP CGP L+ + + + E L + L+ G+IVA+KG+GGFHL C A N A Sbjct: 184 QPNACPACGPTLQLYDADFQPVETADPLVQTASLLRAGQIVALKGVGGFHLVCMADNQAA 243 Query: 236 VATLRARKHRPAKPLAVMLPVAD-----GLPDAARQ-LLTTPAAPIVLVDKKYVPELCDD 289 V LRA K R KP AVM+ G+ A LL T PIVL+ K CD+ Sbjct: 244 VNRLRALKQRDEKPFAVMVLNTRSAQHYGVVSADEAFLLETGERPIVLLGKH---PACDE 300 Query: 290 ----IAPDLNEVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPA 331 +APDL+ +G++LP PL +LL EL + LVMTS N G+P Sbjct: 301 DLPCVAPDLSHIGLLLPYTPLHYLLFHELLGHPDGINWLQQATKIALVMTSANAGGEPLV 360 Query: 332 ISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR-----ESGEMLRRSRGYVPDALALPP 386 I++++A A +ADG+L H+RDI+ R DDSV+R + +RR+RGY P + LP Sbjct: 361 INDDEARASR--LADGYLTHDRDILHRCDDSVMRVVPQAPKFQFIRRARGYTPRRILLPF 418 Query: 387 GFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 P VL LG LKNT C+ RG +A +SQH+GDL G + E + + +I+D P Sbjct: 419 A---APSVLALGGGLKNTVCVTRGNEAFVSQHIGDLDHAGARAMLDETVTHLCDIFDVEP 475 Query: 447 QYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 Q V HD HP +SQ+A +P V HHHAH A AE+ V+ L LD Sbjct: 476 QCVAHDLHPDCYTSQYAARFAAARGVPMIAVQHHHAHINAICAEYAVT---QPVLGLALD 532 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF---VP 559 G G G +G WGGE LRV+ + E LG L AVALPGGD AA +PWR A Sbjct: 533 GAGWGTDGTSWGGELLRVSGAQFERLGHLAAVALPGGDRAACEPWRMASAALFEMGKGAE 592 Query: 560 EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAA 619 Q +S Q +A + RG++ P +SS GR FD A LG + YEG+AA Sbjct: 593 ILQRFS-----NQPAAPTVAAMLARGLHCPQSSSMGRLFDIAAGLLGVSQIQ-HYEGQAA 646 Query: 620 CALEALAASCHGVTHPVT---MPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGF 676 LEALA G P+ + LD + +Q + P + A FH ++ G Sbjct: 647 MHLEALAVR-QGEVKPLDGGYRLAENGVLDFQSLLRQLASCNDP-SFGAALFHATISGGL 704 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 A + + A GI + GG + N LL L L+ +L Q LP DGG+SLGQ Sbjct: 705 IAWVSDAAQKTGIGCVALGGGCLLNSLLSEALTSGLSKQGLQVLSAQLLPPNDGGISLGQ 764 Query: 735 GVIA 738 +A Sbjct: 765 AWVA 768 >UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Dehalococcoides RepID=Q3ZYW4_DEHSC Length = 763 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 300/763 (39%), Positives = 418/763 (54%), Gaps = 54/763 (7%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLA 69 + G VQGVGFRPFV+QLA + L+G V N GVE+ + + F +L PP + Sbjct: 14 LSGVVQGVGFRPFVYQLAAKHRLNGWVRNTSAGVEIEAEGAGQALDAFSEELTSLNPPQS 73 Query: 70 RIDSVEREPFIWSQLPTE----FTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRY 124 I + F +++P F I+ S Q+V PD ATC C ++ P RRY Sbjct: 74 VIKT-----FKQTEIPLTGEEGFEIKPSQSLAGRFQLVSPDIATCTECQKDIFAPRNRRY 128 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPF NCT+CGPRFTII +PYDRP T M F +CP C EY +PL+RRFHAQP ACP C Sbjct: 129 RYPFTNCTNCGPRFTIIEDIPYDRPLTTMKNFKMCPDCQAEYDNPLNRRFHAQPNACPIC 188 Query: 185 GPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP L W++ G + A L+ G+I+A++G+GGF LA DA N AVATLR R Sbjct: 189 GPRL-WLADKTGTELSNTDTIAEAAKLLQDGQILAVRGLGGFLLAADATNPQAVATLRNR 247 Query: 243 KHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP+KP AVML + + LL +PAAPIVL +C + AP N Sbjct: 248 KRRPSKPFAVMLANLEEARKYCSISKEEEHLLVSPAAPIVLCRWNKESPVCPETAPGQNY 307 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ML PL HLLL+E+ PLVMTSGNLS +P A N++AL L IAD FL+HNR I Sbjct: 308 LGIMLSYTPLHHLLLKEINKPLVMTSGNLSEEPIAKDNDEALKRLCNIADYFLLHNRPIY 367 Query: 357 QRMDDSVV-RESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVV E+GE +LRR+RGY P + FK VL +G KNTFCL++ A Sbjct: 368 SRYDDSVVMYEAGEKRVLRRARGYAP--YPVQTHFKG-KEVLAMGPQEKNTFCLLKDGYA 424 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLP 469 +SQH+GD+ + + E L + ++ P+ + D HPGY+++ +W+ +++P Sbjct: 425 FVSQHIGDMQNPETLDSFEETLAVYLKLFRSKPEIIAADLHPGYIATALAEEWSDRLDIP 484 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC----LRVNYREC 525 V HHHAH A+CLAEH +VI + LDG G G +G +WGGE ++ + Sbjct: 485 LVKVQHHHAHIASCLAEHGC---DDEVIGVALDGTGYGLDGNIWGGEFFCGGIKQGFSRQ 541 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 HL LP LPGG+ A K+P+R ++ + E + + + ++ + + Sbjct: 542 AHLEYLP---LPGGEAAIKKPYRTAVSYVYTLLGE-EGLGFFKDIDPEKLDIIKSQLNKK 597 Query: 586 INAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVT-HP--VTMPRV 641 +N+PL SS GR FDAVAA G C A +Y+ + A LEA A +P + + + Sbjct: 598 LNSPLTSSTGRLFDAVAALCGICRVA--NYDSQPAIELEAEAKDTEFAQFYPFELDLDKG 655 Query: 642 DNQLDLATFWQQWLNWQAPVNQRAW---AFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + L + L+ A+ FH+ ++Q R+ + G+T + SGGV Sbjct: 656 IYLIRLKGILEGVLSNIKSGKTAAYISVKFHNTVSQIVLDTCRKLSAESGLTKVALSGGV 715 Query: 699 IHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAA 739 NR L ++ L F +L + +P+ DG +SLGQ VIAA Sbjct: 716 FQNRRLFRQVIQQLETEGFKVLTHKEIPSNDGCISLGQAVIAA 758 >UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A573_RHILW Length = 784 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 300/774 (38%), Positives = 419/774 (54%), Gaps = 47/774 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 +++R++G VQGVGFRPFV+ LA + L G V ND GV + ++ E F+ L Sbjct: 12 LEVRVQGIVQGVGFRPFVYTLANRYELSGWVANDTTGVTISVQGPHASVEAFMEDLTCKL 71 Query: 66 PPLARIDSVE---REPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGE 121 P ARIDSV+ R+ I P FTIRQS+ G NT I PD CP C AE+ P Sbjct: 72 PTAARIDSVDVRSRQACIPPASP-HFTIRQSSVTGQKNTLITPDLHVCPDCEAELFDPNN 130 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCT+CGPR++II PYDRP T M+ F +CPAC EYR+PLDRR+HAQP+AC Sbjct: 131 RRYRYPFINCTNCGPRYSIILDTPYDRPNTTMSRFQMCPACLAEYRNPLDRRYHAQPIAC 190 Query: 182 PECGPHLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 +CGP L + G+ E A++AA +L G+I+A+KGIGGFHL D RN AVATLR Sbjct: 191 GDCGPTLRLTDTAGQPIPAEDAIEAARDRLADGQILAVKGIGGFHLIVDPRNPAAVATLR 250 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +RK R KPLA+M ++ + + L + PIVL+DK L D++ Sbjct: 251 SRKRRYKKPLALMCRDSETASKFVSMGAFEKATLESAPRPIVLLDKLAPNPLAPDVSAGT 310 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + G+ML P+ HLLL L++TS NLS P N++A+ +L IAD FL+H+RD Sbjct: 311 MQHGMMLAYTPIHHLLLDGRFDALIVTSANLSDDPIEFRNDEAIENLSAIADAFLVHDRD 370 Query: 355 IVQRMDDSVV-----RESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 I R+DDSV+ +G +RR+RGY PD + LP +++PP+L LGA+LKNT C Sbjct: 371 IHARVDDSVLLCWTSDHTGPKTMPVRRARGYAPDFVPLP---QSLPPILALGAELKNTIC 427 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-E 465 + RG QA LS H+GDL + + + + + TP+ +V D HP ++S+++A + Sbjct: 428 VNRGNQAFLSPHVGDLKRGKVLTAFHQTIAETVRQHGVTPELMVCDLHPQFLSTEYANSQ 487 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +LP V HHHAH AA + E+ L I + DG G+GE+G WGGE +Y Sbjct: 488 SDLPILQVQHHHAHMAAVMGENG--LCDRPTIGVVFDGFGLGEDGNNWGGEFFVGSYASV 545 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ---QQNWSVLARAI 582 + +G LPGGD A ++ R + E + ++ ++ +L I Sbjct: 546 QRVGHFSNFKLPGGDRATREIDRIAIGFLFDLYGENAFNLDLPVMRTRPEEELRILQTMI 605 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP--- 639 R + PL SS GR FDAVAA G + + YE +AA LEALA G +P Sbjct: 606 GRSVRTPLTSSVGRLFDAVAALTGVR-SEIQYEAQAAIELEALAGR-GGFRRDACLPVVL 663 Query: 640 --------RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 VD +A Q + + + + FH + + GI+ Sbjct: 664 RSDSQGRILVDTHALMAEIAQLAVLPVKSLQEISHRFHATVVLSICEVCGRLRDRFGISN 723 Query: 692 LVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 +V SGGV NR + ++ LA F + + L GDGG+S GQ ++ L Sbjct: 724 VVLSGGVFLNRFILSQTTDELARRGFDVFSHRQLSPGDGGISYGQLLVGGYSLL 777 >UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B9L1W3_THERP Length = 758 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 313/757 (41%), Positives = 425/757 (56%), Gaps = 54/757 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE----TFLVQLYQHC 65 +R+ G VQGVGFRPFV++LA +L L G V N GVE+ + E PE TFL +L + Sbjct: 14 SIRVTGVVQGVGFRPFVYRLATRLGLGGWVLNTEQGVEIVV-EGPEPALATFLSELESNP 72 Query: 66 PPLARIDSV---EREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGE 121 PP ARI S+ + P ++Q FTIR+S G T++ PD ATC ACL E+ P + Sbjct: 73 PPAARIASLSVQQTRPIGFAQ----FTIRESAQGDRPTTRVSPDLATCDACLRELFDPAD 128 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YP+INCT+CGPR++II ++PYDRP T M + LCP CD+EY DP DRRFHAQP+AC Sbjct: 129 RRFHYPYINCTNCGPRYSIILSLPYDRPRTTMKDWSLCPDCDREYHDPGDRRFHAQPIAC 188 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P CGP + + A E A++ A + L GKI+A+KGIGG+HLACDARN+ AV L Sbjct: 189 PLCGPQYQLCTATGQLVARGEDAVRLAASWLVAGKILAVKGIGGYHLACDARNAAAVWAL 248 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RK R KP A+M+ D L DAA LL +PA PI+L+ + EL +AP+ Sbjct: 249 RERKFRKEKPFALMVRDLDTAAQLVELDDAASALLGSPARPILLLPARI--EL-PGVAPE 305 Query: 294 LNEVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 + G+MLP PL H LL P LVMTS N S +P A ++ A A L GIAD FL+ Sbjct: 306 NRDFGIMLPYAPL-HYLLFAFGAPAVLVMTSANRSDEPIAFCDDDAFARLSGIADAFLVG 364 Query: 352 NRDIVQRMDDSVVRE--SGEML-RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 R I +R+DDSV+R SG +L RR+RG P +A P + P+L +GADLKNT LV Sbjct: 365 ERPIARRIDDSVIRHGPSGSILVRRARGLAPAVVATLPTTR---PILAVGADLKNTVTLV 421 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD--FTPQYVVHDAHPGYVSSQWAREM 466 QA +SQH+GDL + + +R + +Y+ +VHDAHP YVS++ A+E+ Sbjct: 422 VAGQAFVSQHIGDLEHWPVVEAFSTTIRDLCAMYEVNLDEALIVHDAHPEYVSTRLAQEL 481 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 V HH AH A+ LAEH+ D V+ DG G G++ ++WGGE + Sbjct: 482 PGTHVAVQHHRAHIASVLAEHECWDD--SVVGFAFDGTGYGDDSSIWGGEVFVGSL---- 535 Query: 527 HLGGLPAVA------LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 +GGL VA LPGGD AA+ P + A L +PE + + + + Sbjct: 536 -VGGLRRVASLRPVLLPGGDAAARWPVQA-AAGFLAMLPELPDLHASPFAFPKRYDEACT 593 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 + R + +S GR FD VAA G +++EG+AA LE LA G P P Sbjct: 594 VLRRRVRCHPTTSMGRLFDTVAALCGFT-RPITFEGQAAIWLEHLARQA-GEVAPYPFPF 651 Query: 641 VDNQLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 V+++LD + + + A AFH+A+A ++ GI +V SGG Sbjct: 652 VNHELDFRPLLAAVIRDRQRGRDIAAIARAFHEAVAHAICSVAAYCREAYGIRHVVLSGG 711 Query: 698 VIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 V N LL R+ L T+ + +P DGG+SLGQ Sbjct: 712 VFQNMLLLTRVQQLLGQTTVWVNRMVPPNDGGISLGQ 748 >UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHS1_9SPHI Length = 778 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 312/767 (40%), Positives = 407/767 (53%), Gaps = 60/767 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCP 66 L + G+VQGVGFRPFVWQLA+ + L G V N DGV + + D +T V ++ P Sbjct: 4 HLHLTGQVQGVGFRPFVWQLARSMKLKGTVSNGADGVHIYVNADLQTVRVLTRRIRAEAP 63 Query: 67 PLARIDSV---EREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGER 122 LARI SV E EP + +FTI +S G + + PD A C AC AE++ P R Sbjct: 64 ALARIQSVKLAEVEPIDFG----DFTIVESQAVGQASLLLTPDLALCDACRAEISDPANR 119 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ Y F CTHCGPR++I+R +PYDRP T MA F +C C++EY DP +RRF+AQ +CP Sbjct: 120 RFGYAFTTCTHCGPRYSILRRLPYDRPTTTMAPFGMCADCEREYHDPSNRRFYAQTNSCP 179 Query: 183 ECGPHLE-WVSHGE--HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 C L +++ G+ +Q +Q +I L G+ +A+KGIGGF L CDA N++A+ L Sbjct: 180 NCLVELSLFLASGQCITRDQSNIIQQSIDVLASGRTIAVKGIGGFLLLCDATNADAIHQL 239 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPEL-----CD 288 R RKHRP KPLAV+ P D L D R LLT+PA+PIV +DK+ PEL D Sbjct: 240 RERKHRPTKPLAVLYPNIDQLQQDCFLADDERALLTSPASPIVALDKR--PELPSGLVAD 297 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 IAP LN++GVMLP PL LL PLV TSGN SG P +NEQAL L +AD Sbjct: 298 QIAPGLNQLGVMLPYTPLLALLADAFGKPLVATSGNRSGSPICYTNEQALDQLSAVADLI 357 Query: 349 LIHNRDIVQRMDDSVVRESGE-----MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 + HNRDIV DDSVVR S +LRRSRG P + N VL LGA LK+ Sbjct: 358 VTHNRDIVVPQDDSVVRLSPVFRQPIILRRSRGLAPTVMMTDIPHSNA-NVLALGASLKS 416 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 TF +SQ+LGDL Q +R L ++D P V+ D H GY S+Q A Sbjct: 417 TFAWQLRGNTYVSQYLGDLESYDTQTSFRATLDHFLTLFDAKPDAVLADQHEGYFSTQLA 476 Query: 464 REM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 E+ +P ++ HH AH AA LAE++ V+ + DG G G +G +WGGE ++ Sbjct: 477 HELANIWGIPLVSIQHHEAHLAAVLAENKLMEQAEPVLGVIWDGTGYGTDGQIWGGEFIK 536 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 + E +G GD ++P L A L F + ++ W++ Sbjct: 537 YQHGGFERVGHFAYFDALLGDKMPREP--RLSALSLAFNIPGADELLRPKFTEKEWNLYT 594 Query: 580 RAIERGINAPL-ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----------S 628 + G+ L SS GR FDAVAA LG A +SYEGEAA LE+ AA S Sbjct: 595 KV---GVQNKLKTSSVGRLFDAVAALLGLAD-KVSYEGEAALLLESCAARYVRVNGYTTS 650 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 H + + +V Q +A L PV Q A FH L Q AA+ R+ G Sbjct: 651 QHYLPETLLKAQVPTQAIVAGVVND-LQAGLPVGQIAATFHYTLVQAVAAVARQM----G 705 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQ 734 + L FSGGV N LL L + L + L F Q L D +S GQ Sbjct: 706 VQQLAFSGGVFQNALLVDWLRYELEPAYQLHFHQQLSPNDECISFGQ 752 >UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LXR8_CLOB8 Length = 766 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 273/773 (35%), Positives = 412/773 (53%), Gaps = 59/773 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPP 67 ++I G VQGVGFRPFV++ A+ + G V N G V + RE+ + F+ + + P Sbjct: 5 IKIYGIVQGVGFRPFVYEKARDFKIRGSVQNIGGAVVIDCLGERENIKRFMFNVIKRPPS 64 Query: 68 LARIDSVE----------------REPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCP 110 +A+I+ VE E I + +F I++S + V PD A C Sbjct: 65 IAKIERVECTLIKKDLSTISCLDENEFIIKENIDKKFVIKESAEQKNEMRFVSPDIAVCD 124 Query: 111 ACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPL 170 CL ++ + G RY+Y F NCT CGPR++II+A+PYDR T M F +C C EY +PL Sbjct: 125 ECLEDIRSKGNLRYKYAFTNCTQCGPRYSIIKALPYDRQNTTMKEFYMCEECKDEYENPL 184 Query: 171 DRRFHAQPVACPECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACD 229 RRFHAQP C +CGP L ++ G+ + E ++ I+ ++ GKI+AIKGIGGFHL CD Sbjct: 185 SRRFHAQPNCCEKCGPKLFLTNNRGDQVKCEDPIKETISLIEEGKILAIKGIGGFHLVCD 244 Query: 230 ARNSNAVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYV 283 RN A+ LR+RK R KPLA+M + + D +++++ PIV++ KKY Sbjct: 245 GRNEQAINLLRSRKQRKDKPLALMAKDIGVIKEICYISDKEEEVISSNKRPIVILKKKYP 304 Query: 284 PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 L + IAP N +GVMLP PL +LL E LVMTSGN+S P NE+AL L Sbjct: 305 FVLPEAIAPKQNSLGVMLPYTPLHYLLFNEKLDLLVMTSGNISSMPMEYKNEEALKHLNT 364 Query: 344 IADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 +AD FL+++R I ++DDSVV+ G+ ++R SRGY P +L G KN ++ +G Sbjct: 365 VADYFLMNDRAIYVQVDDSVVKVIGQVEKVIRGSRGYRP--YSLKAGVKN--EIIAVGGQ 420 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 K+T C+ + A LSQ+LGDL + ++ L+ + N++D + +D HP Y S+ Sbjct: 421 QKSTICVSKNGYAYLSQYLGDLGEFNCYKNFKYVLKHICNLFDINSDVLAYDMHPAYSST 480 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 ++A+E + V HHHAH +C+AEH VI + DG G G +GA+WGGE L Sbjct: 481 KYAKEKKMRKIEVQHHHAHMVSCMAEHSIY---DSVIGIIFDGTGFGLDGAVWGGEFLVG 537 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 N R + G L V L GG+ A K+PWR A + + V + V+ + Sbjct: 538 NRRVFKRAGQLKYVNLQGGEQAIKEPWR--CASSYLYALGYDPEKIIQGVDNEKIKVVKQ 595 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 A++ IN ++SS GR FD VAA G ++SY+G+AA LE + + + + Sbjct: 596 ALDSKINCFVSSSVGRLFDTVAALCG-IRNSISYDGQAAIELENI------IDYKIKESY 648 Query: 641 V-DNQLDLATFWQQW----------LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 D + + F Q+ + + +++ + FH++L + L+ + I Sbjct: 649 SWDIKEENGIFNIQYKSIIEGILGDIQKKELISKISSKFHNSLIKASCDLVCKLREKEHI 708 Query: 690 TTLVFSGGVIHNR-LLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAA 740 +V SGGV N LL+ + + F + + + +P D G+S GQ +A A Sbjct: 709 DKVVLSGGVFENHYLLKGIYVNLIKQGFKVFYNEQIPTNDEGISFGQLHVANA 761 >UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobacteria RepID=HYPF_AZOCH Length = 776 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 315/773 (40%), Positives = 415/773 (53%), Gaps = 53/773 (6%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G VCN G+GV + L+ P F Sbjct: 1 MNEAAKAGVRLLLRGRVQGVGMRPGVHRLATSLGLAGAVCNTGEGVRIDLQGPPAALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTI---RQSTGGTMNTQIVPDAATCPACLA 114 +L PPLAR+D+++RE F I R GG + PDAA CPACL Sbjct: 61 ERRLPAELPPLARLDALQRENLPAGAHFAGFAIVPSRDEAGGALAPP--PDAAVCPACLE 118 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E+ P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C EY DP DRRF Sbjct: 119 ELFDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRAQTSLAGFALCPDCRHEYEDPADRRF 178 Query: 175 HAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 HAQP+ACP CGP L + ++ A+A L+ G+IVA++G+GGFHLACDARN+ Sbjct: 179 HAQPIACPACGPRLWCEDAAGNRLPGEPVELALATLRRGEIVALRGVGGFHLACDARNAG 238 Query: 235 AVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPE--L 286 AVA LR RK RPAKP A+M L L + L+ PAAP+VL+ ++ + L Sbjct: 239 AVALLRRRKRRPAKPFALMAANPASLEALVELNETGLNELSAPAAPVVLLRRRPAADGLL 298 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAI 332 ++APDL +GVMLP +PL LL E LVMTS NLSG+P Sbjct: 299 AAEVAPDLAWLGVMLPHSPLHWLLFHEAAGRPAGTAWTAAPQDLVLVMTSANLSGEPLIT 358 Query: 333 SNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFK 389 N +A L GI D +L+H+R+I+ R+DDS+V G ++R RG P + L + Sbjct: 359 GNLEAREKLAGITDLWLLHDREILNRVDDSLVNALGRAPVVIRSGRGLAPQEIRLA---R 415 Query: 390 NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYV 449 + P VL LG LKN CL +G++A LS H+GDL + + P+ + Sbjct: 416 SGPSVLALGGQLKNAICLTQGDRAWLSPHIGDLHSADACRSLERTVAQFGELLGVRPERI 475 Query: 450 VHDAHPGYVSSQWARE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIG 505 D HP + +S++ARE LP V HHHAH AA LAEH V+ L LDG G Sbjct: 476 ACDLHPDFFASRFAREHAERHGLPLYPVQHHHAHIAAVLAEHGL---AEPVLGLALDGFG 532 Query: 506 MGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS 565 +G +G L GGE L+V C LG L + LPGGD AA++PWR + A L + + Sbjct: 533 LGADGRLRGGELLKVAVDGCAWLGELNPLPLPGGDQAAREPWR-MAAGALHALGRGGEIA 591 Query: 566 ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 T + + +AR +ERG N P +SS GR FDA A LG YE EAA LE+ Sbjct: 592 -TRFAAEPGSAAIARMLERGFNCPPSSSAGRLFDAAAGLLGLGERQ-RYEAEAALRLESR 649 Query: 626 AASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWA--FHDALAQGFAALMREQ 683 S P+ DN+LDL+ + + + R A FH L A + Sbjct: 650 IGSLPEAVPPLWRIGDDNRLDLSPLLARLADTH---DSRVGAELFHAVLIAALTAWVVRA 706 Query: 684 ATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 A G+ + GG N +LR L L A L P+ P DGGL+LGQ Sbjct: 707 AAATGLRRIALGGGCFLNTVLRDGLCTRLQAAGLEPLLPRRAPVNDGGLALGQ 759 >UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLE4_CLOCL Length = 773 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 279/776 (35%), Positives = 410/776 (52%), Gaps = 58/776 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 + RI+G VQGVGFRPF+ ++ + L G V ND +GV V ++ D ++F+ + CP Sbjct: 5 RYRIKGIVQGVGFRPFIHKITAKYELKGWVLNDSEGVVVEVQGKQRDIDSFIDDVKISCP 64 Query: 67 PLARIDSVEREPFIWSQLP-TEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGERRY 124 P+A+I + P SQ +F I++S NT I PDA C C+ E+ RRY Sbjct: 65 PMAKIQDIIEIPVSKSQKRYADFIIKRSIQRRETNTFIPPDAYVCKECVDELLDKNNRRY 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +YPFINCT+CGPR+TII+ MPYDR T M F +CP C KEY+D RR+HAQP ACP C Sbjct: 125 KYPFINCTNCGPRYTIIKEMPYDRISTTMKEFKMCPDCQKEYKDINSRRYHAQPNACPIC 184 Query: 185 GPHLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP LE +GE + + +L GKI AIK IGGFHLA +A + V LR K Sbjct: 185 GPQLELRDKNGEVVIATDVISFSKERLLEGKIFAIKSIGGFHLAANALDEKIVKKLRLLK 244 Query: 244 HRPAKPLAVML---PVADG---LPDAARQLLTTPAAPIVLVDKKYVPELC-DDIAPDLNE 296 R +KP A+M+ +A+ + + ++LL PIVL+ KK P + D IAP+ Sbjct: 245 KRDSKPFAIMVNDTKMAEKYMEVSEEEKKLLNGVERPIVLLKKK--PHMLPDAIAPNNPS 302 Query: 297 VGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 GVMLP+ PL +LLL++ + L+MTSGN+SG+P N +A+ L IAD F+++NRDI Sbjct: 303 YGVMLPSAPLHYLLLEDGRLEALIMTSGNISGEPIVYENNEAIKQLNSIADYFILNNRDI 362 Query: 356 VQRMDDSVVRESG---------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 R+DDS+VR S ++RR+RG+ P + + K V ++ LG++LK T Sbjct: 363 YTRVDDSIVRYSNSNSLRKPITSIIRRARGFAPYPIIID---KKVTSIVALGSELKATVA 419 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-RE 465 + +SQH+GD+ +D I A+ ++ + P+ +V D HP + SS A + Sbjct: 420 TSKCNTVFISQHIGDVKNDKIFESLFNAVEHLKKLLTIEPKVLVCDLHPNFKSSLKAMSQ 479 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 LP V HHHAH AAC+AE+ D I + DG G G +G +WGGE L +Y Sbjct: 480 SELPVIKVQHHHAHMAACMAENNLE---EDTIGIIFDGTGYGHDGTIWGGEFLVGDYNSV 536 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF---------VPEWQNYSETASVQQQNWS 576 + +G L + L GGD A K+P+R L R +P Y+E Q Sbjct: 537 KRVGSLDSFYLLGGDKAIKEPFRVALDILYRTYGEGMLQLGLPFLSKYTE------QEMK 590 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 + + E+ INA +S GR FD V+ + ++ YEG+AA LE L + Sbjct: 591 IYYKMSEKKINAFETTSMGRLFDGVSVLINLC-TSIEYEGQAAIELEGLLNRDFTLDKSF 649 Query: 637 T---MPRVDNQL-DLATFWQQWLNW----QAPVNQRAWAFHDALAQGFAALMREQATMRG 688 + R D + D ++ +N + ++ + FH + ++ Sbjct: 650 NYEILQRDDRYIFDYRAMIREIVNLVSEKEYDISNLSRRFHSTIISALVSITNRIRKDYK 709 Query: 689 ITTLVFSGGVIHNR--LLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 I +V SGGV N L+ + +A +F + + +P DGG+SLGQ ++A A + Sbjct: 710 INNVVLSGGVFMNEYLLVNSIIALENLNFNVFYHSKVPTNDGGISLGQVMVADAIY 765 >UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legionella RepID=C6N6M1_9GAMM Length = 744 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 289/770 (37%), Positives = 414/770 (53%), Gaps = 62/770 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE-TFLVQLYQHCPP 67 +QL I+G+VQGVGFRP V+++A QL L G V N+ GV + ++ F+ L ++ PP Sbjct: 6 LQLIIQGQVQGVGFRPCVYRVANQLRLTGWVQNNASGVLIEVQGTLACEFIPHLKENLPP 65 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LA+I +++ + F I +S G NT I PD C CL E+ P R YRYP Sbjct: 66 LAKISTIQLKTIPLKINEVFFEIIESAKGKANTIISPDTCICSECLQELFDPQSRYYRYP 125 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F+NCTHCGPRF+I + +PYDR T M FPLC C+ +Y +P +RR+HAQP AC CGP Sbjct: 126 FLNCTHCGPRFSITQTLPYDRCQTSMGLFPLCQDCNADYTNPDNRRYHAQPTACANCGPQ 185 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 L ++ ++ G+I+A+KG+GG+ L CDARN + LR RK+R Sbjct: 186 LSL-----------PVENIAQRILQGEIIALKGLGGYQLICDARNEITLLKLRERKNRAT 234 Query: 248 KPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKY-VPELCDDIAPDLNEVGVM 300 KPLA+M+ + + + A+ LL PA PIVL+ KK V D IAP L+ +GVM Sbjct: 235 KPLALMVANSKSAEQIVAISEQAQILLERPARPIVLLQKKNGVSRSIDKIAPGLSHLGVM 294 Query: 301 LPANPLQHLL-------------LQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIAD 346 LP PL +LL L ELQ LV+TS N +G+P I + +A +++ AD Sbjct: 295 LPYTPLHYLLFNAFAENVDGCGWLDELQSMILVVTSANSAGEPIVIEDHRAKIEIKTQAD 354 Query: 347 GFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 + +NR I+ R DDSV R ++RRSRG+VP + LP +PP L +G LKN Sbjct: 355 KIVSYNRRIITREDDSVARLINNKPMLIRRSRGFVPTPIQLP---YTIPPTLAVGGHLKN 411 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 TF + RG +A +SQH+G L++ + E+L + N D P+ + HD HP + ++++A Sbjct: 412 TFSITRGNEAFVSQHIGSLNNKATIDFFHESLTHLLNFLDVKPERIAHDMHPDFYTTRFA 471 Query: 464 REMNLP---TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 + +P Q H A AA Q V+ L LDG G G NG WGGE + + Sbjct: 472 QHYGVPAFAIQHHHAHLAAVAAEHGIQQ------RVLGLALDGYGYGLNGEAWGGELMLL 525 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 CE LG + PGG++AA++PWR + A L + + S+ S Q ++ + Sbjct: 526 EQASCERLGSFYPLPQPGGEIAAREPWR-MAASVLHRLGRGKEISKRFSGCTQAKAI-HQ 583 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 +++ IN+PL SSCGR FDA +A LG + YEG+AA LE+L H P Sbjct: 584 LLDKKINSPLTSSCGRLFDAASALLGVQLMS-QYEGQAAMRLESLVTQLH--IAPNGWRI 640 Query: 641 VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 DN D+ + L+ P+ A FH L G + ++ +R I +V SGG Sbjct: 641 KDNNFDMLPTLELLLDIACPI-AGANLFHGTLIAGLSTWIKGMCRVRRIDMVVLSGGCFL 699 Query: 701 NRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 N++L L L + + P+ LP DGG+SLGQ W+AG +Q Sbjct: 700 NQILAEGLTKALCESGIKSFLPRDLPPNDGGISLGQA------WIAGIIQ 743 >UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q1_SLAHD Length = 785 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 302/797 (37%), Positives = 413/797 (51%), Gaps = 81/797 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHC 65 + + + G VQGVGFRPFV++ A++ + G V N GV + + + +F+++L ++ Sbjct: 5 LDIEVHGVVQGVGFRPFVYKAARRNLISGWVLNATSGVFIHAEGESDHVNSFVMELSENA 64 Query: 66 PPLARIDSVEREPFIWSQLP----TEFTIRQSTGGTM--NTQIVPDAATCPACLAEMNTP 119 P A + + + ++P T F IR S + T + PD ATC C+AE+ P Sbjct: 65 PAAANVKEI-----LLKEVPLEGFTTFEIRFSEEEDVPETTLVSPDLATCDDCVAELFDP 119 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRY YPFINCT+CGPRFTII +PYDR T MA FP+CP C +EY DP DRRFHAQP Sbjct: 120 ANRRYHYPFINCTNCGPRFTIINGLPYDRAATSMAGFPMCPDCAREYADPEDRRFHAQPD 179 Query: 180 ACPECGPHLEWVSHGEH--------AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDAR 231 AC +CGPH+ W + G A +A ++ A L+ G+I+AIKG+GGFHLACDA Sbjct: 180 ACFDCGPHIYWRASGSDEREWGLDLASSDAIVERAAQCLRQGRILAIKGLGGFHLACDAA 239 Query: 232 NSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKK---- 281 N A+A LR RK R K AVM+P D + A LLT PIVL+ K+ Sbjct: 240 NPEALAELRRRKRREGKAFAVMVPNLDAVRAVCHVSKAEEDLLTGSVRPIVLLKKRAEAT 299 Query: 282 YVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 + P LCD L E+G+MLP PLQHLLL LVMTSGNL +P +E+A A L Sbjct: 300 FAPGLCD----KLPELGIMLPYTPLQHLLLAAFGGMLVMTSGNLHDEPIQTDDEEAFAKL 355 Query: 342 QGIADGFLIHNRDIVQRMDDSVVR--------ESGEMLRRSRGYVPDALALP---PGFKN 390 GIAD F+ ++R IV R DDSVVR ++ +M+RR+RGY P + L + Sbjct: 356 GGIADAFIGNDRPIVTRFDDSVVRVIQVGTAGDALQMVRRARGYAPMPVPLKRHAAEGQK 415 Query: 391 VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV 450 + V G + KNTFCL+RGE A +SQH+GD+ + W +A + ++ TP + Sbjct: 416 LDTVFAAGPEQKNTFCLLRGEDAFVSQHIGDMENAETFDAWLDAKARFERLFQATPDRIA 475 Query: 451 HDAHPGYVSSQWAREM---NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 +D HP Y++S+WA E + V HHHAH + +AE+ VI + DG G G Sbjct: 476 YDLHPEYLASKWALEQAAAGAAAEPVQHHHAHIVSVMAENDLT---DAVIGVAFDGTGYG 532 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRN----LLAQCLRFVPEWQN 563 +G +WGGE + N ++ E V +PGG A K P R L L P Q Sbjct: 533 VDGRIWGGEVMMANRQDFERFANFAYVPMPGGAAAVKHPDRMAYGFLWTYDLLEHPAAQP 592 Query: 564 YSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE 623 E Q + + I+RG+N P+ SS GR FDA++A G L YEGEAA E Sbjct: 593 MLEAMGQQAELCGTM---IDRGLNTPMTSSVGRMFDALSAICGVCTEPL-YEGEAAILFE 648 Query: 624 ALAASCHGVTHPVTMPRVDNQ--------------LDLATFWQQWLNWQAP---VNQRAW 666 A A + + V N D ++ L+ A V + Sbjct: 649 A-AMNGVQTDEAYAIDVVKNTAGEGSTAHNTSVVLFDAEPLFRGVLDDLAAGVGVETISA 707 Query: 667 AFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLP 724 H+AL + G++T+ +GGV NR L L A FT+ + LP Sbjct: 708 KAHNALVAAVLQICLVANAAYGVSTVALAGGVFMNRYLIEHTTAALESAGFTIAINRELP 767 Query: 725 AGDGGLSLGQGVIAAAR 741 DGG++ GQ AAAR Sbjct: 768 PNDGGIAYGQAAAAAAR 784 >UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Arthrospira RepID=B5VUX7_SPIMA Length = 796 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 308/787 (39%), Positives = 423/787 (53%), Gaps = 75/787 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 + L IRG VQGVGFRPFV++LA QLNL G V N GV + + E E F +L Sbjct: 12 LSLTIRGAVQGVGFRPFVYRLATQLNLKGWVNNSVGGVFIEVEGCSESLERFQQRLQIEK 71 Query: 66 PPLARIDSVEREPFIWSQLP--TEFTIRQSTG---GTMNTQIVPDAATCPACLAEMNTPG 120 PP++ I S+E +W L + F IR S G + ++PD ATCP CL ++ P Sbjct: 72 PPISHIHSLEA---VWLPLAGYSHFEIRASQSTIQGAKSAIVLPDLATCPQCLQDIFDPH 128 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RR+RYPF NCT+CGPR++II+ +PYDR T MAAFP+CP CD+EY P DRRFHAQP A Sbjct: 129 NRRFRYPFTNCTNCGPRYSIIKTLPYDRENTTMAAFPMCPNCDREYHHPGDRRFHAQPNA 188 Query: 181 CPECGPHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP CGP LE W G+ A + AL A A + G+IVA+KG+GGF L DA N+ AV Sbjct: 189 CPVCGPILELWNHQGQVLANRHHALLQAAAAMGRGQIVAMKGLGGFQLLVDATNAAAVEQ 248 Query: 239 LRARKHRPAKPLAVML-------PVADGLPDAARQLLTTPAAPIVLVDK-KYVPELCDDI 290 LR RKHRP KP AVM V D + A Q L +P APIVL+ + L D++ Sbjct: 249 LRVRKHRPHKPFAVMYRSIQQIAQVCD-ISAAEEQWLRSPQAPIVLLSRLPGASALADNV 307 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP +GVMLP PL HLL+ EL P+V TSGN S +P +AL L IAD FL+ Sbjct: 308 APGNPNLGVMLPYTPLHHLLMAELDFPIVATSGNFSNEPICTDQTEALHRLGKIADIFLV 367 Query: 351 HNRDIVQRMDDSVVRES-GE--MLRRSRGYVP---------------DALALPPGFKN-- 390 HNR I + +DDSVVR GE ++RR+RGY P D++ L N Sbjct: 368 HNRPIARPVDDSVVRSVLGEQMVIRRARGYAPLPVTILDRDSHHTTHDSI-LSQSISNCQ 426 Query: 391 VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV 450 P +L +G LKNT + +Q +SQ++G+L ++EA+ + NIYDF P + Sbjct: 427 YPYILAVGGHLKNTIAIAVEKQVFISQYIGNLQSPQAFQAFKEAINSLSNIYDFKPDVIA 486 Query: 451 HDAHPGYVSSQWAREM----------NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 DAHP Y+S+Q+A ++ +P V HH+AH A +AEHQ V+ + Sbjct: 487 CDAHPDYISTQFAYQLAADIWQQEKRQVPVIPVQHHYAHVLAVMAEHQLSF---PVLGVA 543 Query: 501 LDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE 560 DG G G + +WGGE L +N + +G LPGGD A +P R L E Sbjct: 544 WDGTGYGLDETIWGGEFLLINKIGFQRVGHWRNFPLPGGDKAVLEPRRLGLGLLYELWGE 603 Query: 561 --WQNYSETASVQQQNW---SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYE 615 W +Y + N+ ++ + + R +N P SS GR FDA+A +G +S+E Sbjct: 604 QLW-DYLNKQKISLGNFPQLKLILQMLNRKVNTPRTSSVGRLFDAIAFLVGHR-DNISFE 661 Query: 616 GEAACALE-ALAASCHGVTHPVTMPRVDNQ--LDLATFWQQWL---NWQAPVNQRAWAFH 669 G+AA LE A+ +P+ + + + LD +Q L N PV+ + FH Sbjct: 662 GQAAMDLEFAIGDVITDEHYPINLHQSSGKIILDWEPMVKQVLKDFNNHVPVSLISAKFH 721 Query: 670 DALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLL--FPQSLPAGD 727 + L +G + ++ + LV +GG NR L + L ++ + + +P D Sbjct: 722 NTLIEGIIMVSQKFPEV----PLVLTGGCFQNRYLLEKTIQRLTSEGIIHYWSKQVPTND 777 Query: 728 GGLSLGQ 734 GGL+LGQ Sbjct: 778 GGLALGQ 784 >UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA36_9ACTN Length = 823 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 330/816 (40%), Positives = 420/816 (51%), Gaps = 86/816 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 V + + G VQGVG RPFV++ A + G V N GDGV + + + F+ L +H Sbjct: 4 VHIHVTGIVQGVGMRPFVYREAMAHGICGWVLNAGDGVHIEAHAPADALDAFVAALSEHA 63 Query: 66 PPLARIDSVEREPFI---WSQLPTE-FTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPG 120 P AR++ VE W + F I S T +T +V PD ATC CL E+ P Sbjct: 64 PAAARVEYVEVVDLAANGWDAANEQGFRIVASQDQTAHTTLVSPDIATCNDCLRELFDPA 123 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRY YPFINCT+CGPRFTIIR++PYDR T M FP+CP C EY DPLDRRFHAQP A Sbjct: 124 DRRYHYPFINCTNCGPRFTIIRSLPYDRAATSMDCFPMCPRCAAEYADPLDRRFHAQPDA 183 Query: 181 CPECGPHLEW--VSHGE--------------HAEQEAALQAAIAQLKMGKIVAIKGIGGF 224 C +CGPH+ W +G+ +A ++ + L G IVAIKG+GGF Sbjct: 184 CFDCGPHITWREAVNGDACGNSSATPAVGTTREASDAIIERCVELLASGGIVAIKGLGGF 243 Query: 225 HLACDARNSNAVATLRARKHRPAKPLAVML-PVADG-----LPDAARQLLTTPAAPIVLV 278 HLACDA N AVA LR RK R KPLAVM+ +AD + DA R+LL PIVL+ Sbjct: 244 HLACDAANEQAVAELRRRKRRSNKPLAVMVRSLADAGRLCHIDDAERELLAGSIRPIVLL 303 Query: 279 DKKYVPE----------LCDDIAPDLNEVGVMLPANPLQHLLLQELQC----PLVMTSGN 324 ++ V E L +A DL E+GVMLP PLQHLLL + LVMTSGN Sbjct: 304 RRRAVCESNGGSPDAFALAPSVAHDLPELGVMLPYTPLQHLLLAAAEACGMHALVMTSGN 363 Query: 325 LSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVR-ESGEML--RRSRGYVP 379 LS +P ++ A L GIAD L ++R I+ R DDSVVR G ++ RR+RGY P Sbjct: 364 LSEEPIETDDDLAWEHLVAAGIADALLGNDRAILSRYDDSVVRVVDGAIMPVRRARGYAP 423 Query: 380 DALALPPGFKNVPPVLCLGADLKNTFCLVR----GEQ-AVLSQHLGDLSDDGIQMQWREA 434 L LP VL G K T L R GE +SQH+GD+ + G W A Sbjct: 424 QPLPLPALDGAPSCVLACGPQQKATIALAREGTNGEAPCFVSQHIGDVENGGTFDAWNAA 483 Query: 435 LRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEH--- 487 +++++D P + D HP Y+S QWARE NLP V HHHAH A+ +AE Sbjct: 484 RTRLEDLFDLAPAALACDVHPSYLSGQWAREQARKCNLPLVEVQHHHAHIASVMAEAIAA 543 Query: 488 -QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQP 546 Q D V+ + DG G G +G +WGGE L + E L ALPGG + + Sbjct: 544 GQLTTD-ARVLGIAFDGTGAGADGTIWGGEFLVASLGGFERAAHLRTWALPGGAASVRDA 602 Query: 547 WRNLLA--QCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 RN A L + S+ +Q SV A IERGIN+P SS GR FDA AA Sbjct: 603 RRNAFALLSELGLLEHPGAARLLDSLDEQTRSVTATMIERGINSPRTSSMGRLFDAAAAI 662 Query: 605 LG-CAPATLSYEGEAACALEALA--------------ASCHGVTHP--VTMPRVDNQLDL 647 LG C AT YEGE A LEA A + + + P + P V +Q L Sbjct: 663 LGICDKAT--YEGEPAIELEAAAWRALDNEIARFPDDNAGYFASGPSWLDGPYVLDQKAL 720 Query: 648 ATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 + A ++ A FH A+A+ A + E GI T+ SGGV NRLL Sbjct: 721 FEALLGGIEAGASADRLALDFHVAVARSSARIASEICVHEGIDTVALSGGVFMNRLLLQL 780 Query: 708 LAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L L T+L P S+P DG ++ GQ +A R Sbjct: 781 LTRELKSMGLTVLVPHSVPVNDGCIAYGQAAVARTR 816 >UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory protein n=6 Tax=Euryarchaeota RepID=Q8U3B1_PYRFU Length = 779 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 288/771 (37%), Positives = 406/771 (52%), Gaps = 46/771 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLR---EDPETFLVQLYQHC 65 ++ ++G VQ VGFRPFV+++A NL G V N GD GVE+ + ED E F+ LY+ Sbjct: 11 RIHVQGIVQAVGFRPFVYRIAHAHNLRGYVRNLGDAGVEIVVEGREEDIEAFIKDLYKKK 70 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQST--GGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLARID VERE + + ST G ++ I PD A C CL E+ P ++R Sbjct: 71 PPLARIDKVEREEIPLQGFDRFYIEKSSTEKKGEGDSIIPPDIAICEDCLRELFNPTDKR 130 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFI CT+CGPRFTII +PYDR T M FP+C C EY DPL+RR+HA+PVACP Sbjct: 131 YMYPFIVCTNCGPRFTIIEDLPYDRENTAMREFPMCEFCRSEYEDPLNRRYHAEPVACPT 190 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + + L+ A + G IVAIKGIGG HLACDA + VA LR R Sbjct: 191 CGPSYRLYTSDGNEIIGDPLRKAAKLIDKGYIVAIKGIGGIHLACDATREDVVAELRKRI 250 Query: 244 HRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP KP A+M + + A + LT+ PIV + KK L +++AP L+ + Sbjct: 251 FRPQKPFAIMAKDLETVRTFAYISPEEEEELTSYRRPIVALKKKEPFPLPENLAPGLHTI 310 Query: 298 GVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP ++L + P+ VMTS N G P NE+A L+ +AD L+HNR I Sbjct: 311 GVMLPYAGTHYILFHWSKTPVYVMTSANFPGMPMIKDNEEAFEKLRDVADYLLLHNRRIP 370 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVVR ++RRSRG+VP + +P +K L +GA+L N F +V+ + Sbjct: 371 NRADDSVVRFVDGRRAVIRRSRGFVPLGIEIPFEYKG----LAVGAELMNAFGVVKNGKV 426 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQW----AREMNL 468 SQ++GD S + REA+R I VV D HP Y +++ A E Sbjct: 427 YPSQYIGDTSKIEVLEFMREAVRHFFKILRVDNLDLVVADLHPSYNTTKLGMEIAEEFGA 486 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HH+AH A+ +AEH +V+ + LDG+G G +G WGGE + ++Y + E L Sbjct: 487 EFLQVQHHYAHVASVMAEHNLE----EVVGIALDGVGYGTDGKTWGGEVIYLSYEDVERL 542 Query: 529 GGLPAVALPGGDLAAKQPWRNL---------LAQCLRFVPEW-QNYSETASVQQQNWSVL 578 + LPGGDLA+ P R L L + + + E+ N ++ + + V+ Sbjct: 543 AHIEYYPLPGGDLASYYPLRALIGILSLNHDLEEVEKIIREFCPNAIKSLKYGETEFRVI 602 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 R + GIN ASS GR DA + L + YEGE A LE+ A +T Sbjct: 603 MRQLSSGINVAYASSTGRVLDAFSVLLNVS-YRRHYEGEPAMKLESFAYQGKN-DLKLTA 660 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQR--AWAFHDALAQGFAALMREQATMRGITTLVFSG 696 P ++ ++ +++ L N + A++ H ALA+ FA + E+A G T+V G Sbjct: 661 PIEGEEIKVSELFEEVLELMGKANPKDIAYSVHLALARAFAEVSVEKAKEFGAKTVVLGG 720 Query: 697 GVIHNRLLRARLAHYLADFTLLF--PQSLPAGDGGLSLGQGVIAAARWLAG 745 GV +N L+ + + L F +P GD G+++GQ + +L G Sbjct: 721 GVGYNELIVKTIRKIVEGRGLRFLTTYEVPRGDNGINVGQAFLGGL-YLEG 770 >UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Anaeromyxobacter RepID=A7H7N6_ANADF Length = 781 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 319/775 (41%), Positives = 413/775 (53%), Gaps = 53/775 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQH 64 G ++R+ G VQGVGFRPFV++L+ L G V ND GV + + F L Sbjct: 16 GRRVRVTGTVQGVGFRPFVYRLSHAHGLSGRVWNDASGVTIEAFGSAGALDRFERALRTD 75 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERR 123 PP A ++++ EP I + F I +S + I PD ATCPAC E+ P +RR Sbjct: 76 HPPAAVVETLRSEP-IAGEPSVGFEIVESGASSERRAAIPPDLATCPACERELRDPHDRR 134 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YPF NCT CGPRFTI PYDRP T MA+F +C AC +EY DPLDRRFHAQP ACP Sbjct: 135 HGYPFTNCTDCGPRFTIAHGAPYDRPATTMASFVMCEACAREYADPLDRRFHAQPNACPA 194 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGK------IVAIKGIGGFHLACDARNSNAVA 237 CGP + V A A ++AA +G+ I A+KGIGGFHLACDA +S AVA Sbjct: 195 CGPRVRVV-----ARDGAPVEAADPIGHVGRALAAGAIAAVKGIGGFHLACDATSSAAVA 249 Query: 238 TLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE------ 285 TLRARK R KPLAVM+ D + +A LL + PIVL ++ PE Sbjct: 250 TLRARKRREEKPLAVMVRDLDEARRLAEIGEAEAALLASVERPIVLCRRR--PEARFDGL 307 Query: 286 -----LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 L ++APD VG++LP PL HLLL PLVMTSGNLS +P A +++AL Sbjct: 308 TVSGSLAPEVAPDSPLVGLLLPYAPLHHLLLGAAARPLVMTSGNLSEEPIAFEDDEALRR 367 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCL 397 L GIAD FL+H+R I R DDSV R ++RRSRGYVP + + F PVL + Sbjct: 368 LGGIADLFLVHDRPIASRCDDSVARTVAGRPLVMRRSRGYVPRPVIVHRRFAR--PVLGV 425 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA LKNTFCL RG++AVL H+GDL + + A+ ++ P+ V D HP Y Sbjct: 426 GAQLKNTFCLARGDEAVLGPHVGDLDNLETYAAYEGAIARLEGFLALRPEVVACDLHPLY 485 Query: 458 VSSQWARE--MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 +S+++ARE L V H HA A A + LD G V+AL DG G+G +GA WGG Sbjct: 486 LSTRYARERAAALGVPLVEVQHHHAHAAAAMAEHGLD-GPVLALAWDGTGLGTDGAAWGG 544 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETASVQQ 572 E L V E L + L GGD A ++PWR LA L E + +V Sbjct: 545 ELLLVERDRFERLATFRPLPLAGGDRAIREPWRIALAAVLDAFGEDAPLEALPLFRAVPP 604 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 +V+ R + G+NAP A GR FDA A AL YEG+ A AL+ A Sbjct: 605 AELAVVRRLLATGLNAPPAHGAGRAFDA-AGALALGRGVSRYEGQVALALDNAATGAAEA 663 Query: 633 THPVTM--PRVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMR 687 +P + R +LDL W+ + AP + FH ALA+ A L+R + Sbjct: 664 PYPFDLDTSRPVTELDLRPLWRALVADVIAGAPPAAVSSRFHAALARAGAELVRRASRTT 723 Query: 688 GITTLVFSGGVIHN-RLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 G +V +GG N RL L F + +P GDGG++LGQ ++A AR Sbjct: 724 GRLPIVLTGGCFQNARLAEGILGELSLSFEVYPHGQVPPGDGGIALGQALVADAR 778 >UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4L8_ACIC5 Length = 781 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 306/765 (40%), Positives = 420/765 (54%), Gaps = 45/765 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 + L +RG VQGVGFRP+++ LAQ+ L G V N G GV + + +F+ L Sbjct: 15 ISLTLRGIVQGVGFRPYIYNLAQRHQLSGYVLNTGAGVTIEVEGAAASLHSFIHTLPAQI 74 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRY 124 PPLARID ++ I F IR+S + +VP D C ACLA+ RR Sbjct: 75 PPLARIDDLQLA-IIEVIGERNFVIRESDRSQSSFALVPSDICLCDACLADTRDSTNRRN 133 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPF NCT+CGPR++I+ +PYDRPFT MA F +CP C +EY DP +RRFHA+P ACP C Sbjct: 134 WYPFTNCTNCGPRYSIVIDLPYDRPFTTMAEFSMCPDCRREYNDPTNRRFHAEPNACPVC 193 Query: 185 GPHLEW---VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 GP L + + A L QL G+I+A KG+GG+ LACDA +AV+TLR Sbjct: 194 GPKLSLSPATAEIPDGDSRAILTYIARQLISGRIIAWKGLGGYQLACDATREDAVSTLRR 253 Query: 242 RKHRPAKPLAVM---LPVADGLPDAA---RQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RKHR KP A+M + A+ L + R L + PIVL+ +K L ++P Sbjct: 254 RKHRSEKPFAIMVAGITAAEQLCVVSPLERTALLSSQRPIVLLRRKTAANLAASVSPGNP 313 Query: 296 EVGVMLPANPLQHLL---LQEL---QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 GVMLP+ P+ LL L+EL PLVMTSGNLS +P A+ N++A A L +AD F+ Sbjct: 314 TTGVMLPSTPMHDLLFLALRELAGASIPLVMTSGNLSEEPIAVDNDEAEAKLADVADLFV 373 Query: 350 IHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 HNR I R+DDSVVR + +RR+RG+ P + L G V VL GA KNT C Sbjct: 374 HHNRRIHTRVDDSVVRVIDDEVLPIRRARGFAPQPVWL--GMGEV-QVLACGAQQKNTLC 430 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-RE 465 L + A SQH+GDL + + + + M ++ P+ + HD HPGY+S+QWA R+ Sbjct: 431 LTKSGFAFPSQHMGDLENYETLEFFEQTRKRMCRLFHIEPEVIAHDLHPGYLSTQWALRQ 490 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + V HHHAH AAC+AEHQ VI + DG G+G + +WGGE L + R Sbjct: 491 SGIRHIPVQHHHAHIAACMAEHQL---RNPVIGVAWDGTGLGTDNTIWGGEFLIADLRSF 547 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCL-RFVPEWQNYSETASVQQQNWSVLARAIER 584 + L V L GGD A ++PWR + L F+ + A + Q+ V+ + + Sbjct: 548 QRAAHLRTVHLAGGDTAVREPWRVAYSYLLDTFIDQPPAPPSFAQLPQERTRVVDTMLRQ 607 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP--RVD 642 ++ SS GR FDAVAA +G AT+SYEG+AA ALEA+AA + +T P P +D Sbjct: 608 HLHTVPTSSAGRLFDAVAALIGIH-ATVSYEGQAAVALEAIAADAN-LTEPEPYPFNLID 665 Query: 643 N---QLD----LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + QLD +A ++ L+ + P A FH L + R+ I + S Sbjct: 666 DASMQLDFRPMIAALIEEVLSNE-PKQLMAARFHATLVCAIVRVCRKIRETTHINQVCLS 724 Query: 696 GGVIHNRLLR--ARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 GG N+LL +R + F + FP+++PA DGG+SLGQ IA Sbjct: 725 GGCFQNQLLLRGSRNTLRASGFEVYFPRAVPANDGGISLGQAAIA 769 >UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfitobacterium hafniense RepID=B8FQW6_DESHD Length = 758 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 307/770 (39%), Positives = 423/770 (54%), Gaps = 59/770 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCPPLA 69 + + G VQGVGFRP+V++LA ++ + G V N GV + F +L Q PPLA Sbjct: 7 IHLNGIVQGVGFRPYVYRLAHEMGIKGWVNNSSHGVYIHAEGLQVPVFYRRLLQEVPPLA 66 Query: 70 RIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 +I E + +F I QS G + I PD ATC CLAE+ + RYRYPF Sbjct: 67 KITHEEYREVAFGNY-ADFAILQSREEGQADVLISPDIATCGDCLAELRDVQDLRYRYPF 125 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 INCT+CGPR+TII+ +PYDR T M +FP+CP C +EY DPL+RRFHAQPVAC +CGP + Sbjct: 126 INCTNCGPRYTIIQDVPYDRAQTTMQSFPMCPVCAQEYADPLNRRFHAQPVACSQCGPAV 185 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + ++ A+ + I Q+ G+I+AIKG+GGFHL CD N AV LR RK R AK Sbjct: 186 QLLN----AQGDFCAGLGIEQIARGEIIAIKGLGGFHLVCDGGNPTAVQRLRQRKERGAK 241 Query: 249 PLAVM---LPVADGLPDAA---RQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLNEVGVM 300 P A+M L V + +LL + AAPIV++++K L D++AP L+ +GVM Sbjct: 242 PFALMARNLEVIRRYLKVSLKEEELLKSSAAPIVILERKKESGNVLPDELAPGLHTLGVM 301 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL LL LVMTSGNLSG+P +NE+A+ +L+GIAD FL+HNRDI D Sbjct: 302 LPYTPLHALLFDGAFDFLVMTSGNLSGRPLIYTNEEAVRELKGIADYFLLHNRDIFHPCD 361 Query: 361 DSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ G+ + RR+RGYVP P K +L +G +LKN FCL ++A SQ Sbjct: 362 DSVVQVIGDEAVLHRRARGYVPLPQKCPQDLK--ASILGVGGELKNAFCLGAKDRAFTSQ 419 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ-TVLHH 476 ++GD+ ++R+ L Q + P+ V +DAHP + ++Q+A P + V HH Sbjct: 420 YIGDMEGYENFQRFRQELASFQKVVQIVPEVVAYDAHPDFQTTQFALAGPWPQKIKVQHH 479 Query: 477 HAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN---YRECEHLGGLPA 533 HAH + L EH + + DG G GE+ +WG E L+ N YR HL LP Sbjct: 480 HAHLVSVLGEHGIT---APALGVVCDGTGWGEDRRIWGFEFLKGNAEGYRRLAHLEYLP- 535 Query: 534 VALPGGDLAAKQPWRNLLA--QCLRFVPEW----QNYSETASVQQQNWSVLARAIERGIN 587 LPGGD AK P R A + L EW + + A +Q+ +L + +E+ + Sbjct: 536 --LPGGDAGAKHPLRIAYAYGKSLLSEREWLMTERLWERLAGAEQK---ILDQQLEKRLQ 590 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM-PR-----V 641 SS GR FDAV+A LG +++YEG+AA LE+ AA G + PR Sbjct: 591 IFETSSGGRLFDAVSALLGIC-TSVTYEGQAAIELESKAALWSGKNSEDALEPRYLIEWA 649 Query: 642 DNQLDL-----ATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 +N L +W Q L+ + P A+ FHD+LA G + E G LV Sbjct: 650 ENGECLILKVKELYWGIIQDVLDGKEPAFI-AYHFHDSLAHGIVRTVLELQVGEG--PLV 706 Query: 694 FSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAAR 741 +GGV N+LL ++ F + + + LP GDGGL+LGQ +I R Sbjct: 707 LTGGVFQNKLLTEKVLVLCKAFGIQVIRAKELPPGDGGLALGQILIGNER 756 >UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NVI5_HALUD Length = 766 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 304/770 (39%), Positives = 413/770 (53%), Gaps = 50/770 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP---ETFLVQLYQH 64 V + + G VQGVGFRPFV++ A +L G V N GDG VE+ L + E+FL L Sbjct: 7 VTVSVTGVVQGVGFRPFVYRTATGNDLAGRVKNTGDGRVEIVLEGEARGIESFLSTLRTD 66 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERR 123 PPLARI++V E + L T F I ST + + I PD A C ACLA++ R Sbjct: 67 PPPLARIENVTVEDGEPTALDT-FEIVASTDSSGGSGTIPPDTAMCDACLADLRDSSSRF 125 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + Y C CGPR+T+IR +PYDRP T MAAFP+C C +Y +P DRR+HAQ +ACPE Sbjct: 126 HGYWATACVDCGPRYTVIRELPYDRPTTSMAAFPMCDDCRADYGEPSDRRYHAQTIACPE 185 Query: 184 CGPHLEWVSHGEHAEQ--EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L + +A + A+ A +L G++VAIKGIGG HLACDA + V TLR Sbjct: 186 CGPTLSLLDGDGNARAGGDDAIAKAGDRLADGELVAIKGIGGTHLACDATDPAVVETLRE 245 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVD--KKYVPELCDDIAPD 293 R RP KP A+M P + + D R L PI+L+D ++ P+ D ++P Sbjct: 246 RTGRPEKPFALMAPDLEAVESVAQISDTERDALEDTRRPILLLDGRRENRPDWFDTVSPG 305 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L VGVMLP + L H L + ++ PLVMTS N+ G P A LADL G+ D L+H+R Sbjct: 306 LKTVGVMLPYSGLHHRLFEHIEGPLVMTSANMPGVPMATDRASILADLDGVIDAALVHDR 365 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +IV R DDSV R SG +RRSRG+VP++L LP + VL LGA+ T L + Sbjct: 366 EIVMRCDDSVARFSGGQRRFVRRSRGWVPESLPLPSPAETAEDVLALGAEFDATVALTQD 425 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE----- 465 V SQ++GD+ + RE + ++++ P V DAHP +++++ ARE Sbjct: 426 GAVVPSQYVGDVDNPETVEYLRETVEHLRDLLGTDPDVVACDAHPDFLTTREAREYAERE 485 Query: 466 -MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 M P Q V HHHAHAA+ LAE + + + DG G G +G++WGGE L + Sbjct: 486 GMAGPVQ-VQHHHAHAASLLAERERER----AVVIAADGTGYGPDGSIWGGEVLDATLAD 540 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN--YSETASVQQQNWSVLARAI 582 E +GGL +LPGG A +QP R LLA L + A Q+ + + + + Sbjct: 541 FERVGGLSTFSLPGGTAAIEQPAR-LLASLLDGGDRIDELLLARGAVDSQRAAATVRQQV 599 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP--- 639 +GIN P +S GR DAV+A LG P SYEGE A LE AA+ G +P Sbjct: 600 SQGINTPETTSAGRLLDAVSALLGVCPER-SYEGEPAMKLE--AAAVDGAVLDYDIPFGT 656 Query: 640 ----RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 RV + L + A ++ A ALA G A + A RG+ + F+ Sbjct: 657 RDGARVVDARQLVRDLDALADDHA-ISDVAATAQWALAGGLADVAVAVAEDRGVDAVGFT 715 Query: 696 GGVIHN----RLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GGV +N R +R R+ DF L +P GDGG++ GQ +AA R Sbjct: 716 GGVAYNDAITRTIRDRVVAAGLDF--LGHDRVPPGDGGIAYGQVAVAATR 763 >UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shewanella RepID=B8CMI9_SHEPW Length = 798 Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust. Identities = 292/793 (36%), Positives = 406/793 (51%), Gaps = 62/793 (7%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF--LVQLYQHCP 66 V+++I G VQGVGFRPFV++LA L L G V N+ +GV + + T L P Sbjct: 8 VEIKITGIVQGVGFRPFVYRLAHDLALSGSVLNNSEGVTIEAQASEYTIEQFKLLLTSPP 67 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PLARIDS E + + +F I S + D TC C A+++ P R +R Sbjct: 68 PLARIDSFETKQIPVEKAQEQFCIIHSQNNADAIVAVSADKCTCADCFADISNPKSRYFR 127 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPF NCT+CGPR+TII +PYDR T MA F +C C+KEY+DPL+RR+HAQPV+CP CG Sbjct: 128 YPFTNCTNCGPRYTIINNLPYDRVNTSMATFVMCTTCEKEYQDPLNRRYHAQPVSCPNCG 187 Query: 186 PHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L + ++ + + L AI +K GKI+AIKG+GGFHL CDA N ++V LR RK Sbjct: 188 PQLSFRNLNLSITSSESDPLVQAIEAIKSGKILAIKGLGGFHLVCDATNHDSVKALRQRK 247 Query: 244 HRPAKPLAVMLP---VADGL---PDAARQLLTTPAAPIVLVDKKYVPEL--CDDIAPDLN 295 +RPAKPLA+M+ VA L D Q L + PI ++ K+ PEL IAPD++ Sbjct: 248 NRPAKPLAIMVENSQVAKKLVTGNDTEWQTLNSNERPITVMQKRQKPELEISSIIAPDID 307 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GV LP PL +L++ + PLVMTS NLSG+P ++E ++ L I D L HNR I Sbjct: 308 RLGVFLPYTPLHQMLMERVARPLVMTSANLSGEPIITASEDIVSKLGHIVDHILDHNRPI 367 Query: 356 VQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 + DDSVV+ ++LR +RGY P ++ P + P L LGA KNT C G Sbjct: 368 LNGCDDSVVQVINNRLQILRLARGYAPLSIYSPQHIEK--PTLGLGAQQKNTLCFAFGHN 425 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 LS H+GDL + + + L +Y F + +VHD HP Y +SQWA + +T Sbjct: 426 LFLSPHIGDLVSVEAERYFHDTLSTFSRLYHFEAKLLVHDRHPNYFTSQWAADEEEAFKT 485 Query: 473 -VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HH+AH + LAE++ V+A T DG G+GE+ LWGGE L + + E + L Sbjct: 486 EVQHHYAHVLSVLAENK---TTEQVLAFTFDGTGLGEDHTLWGGEVLLADAYKFERIAHL 542 Query: 532 PAVALPGGDLAAKQPWRNLLAQCL-RFVPEW---QNYSETASVQQQNWSVLARAIERGIN 587 L GG+ A KQP R L++ L ++ PE ++ + + S L + + Sbjct: 543 TPFKLIGGEQAIKQPVRLLISILLEKYSPEEIAAMKLPAIDNLSRTHLSNLCKVWHKTSP 602 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC---------HG-VTHPVT 637 SS GR FD VA L + YEG+A LE A S HG + Sbjct: 603 NSQTSSIGRLFDVVAVLLNLVD-IIQYEGQAGILLETAANSVIPSDDMNNYHGKAKEDLK 661 Query: 638 MPRVDNQLDLATFWQQWLNWQ-------------------APVNQRAWAFHDALAQGFAA 678 ++ Q D + WQ VN A AF D +A Sbjct: 662 ANNIEIQCDFKLHLTERNQWQPIELIEQILTEIHKMPLTTDRVNFIARAFMDCIAN---- 717 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 ++ + A T +V +GGV NR L R L ++ P+ +P D G++LGQ Sbjct: 718 MVCDIALGFKSTPIVLTGGVFQNRYLLERCERQLTAQANKIMQPKFVPINDAGIALGQAW 777 Query: 737 IAAARWLAGEVQN 749 A + + N Sbjct: 778 FAINNNIETTIDN 790 >UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL9_9BACT Length = 774 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 296/759 (38%), Positives = 425/759 (55%), Gaps = 51/759 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETFLVQLYQHC 65 +Q+ I G VQGVGFRP V++LA+ LNL G V N+ GV + L D E FL +L Sbjct: 15 LQVFIHGAVQGVGFRPHVYRLARDLNLVGWVINNSQGVRIEVEGLAFDLEQFLDRLKSEK 74 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLA++ S+E ++ ++F +R S + G I+PD ATCP C AE+ P +RRY Sbjct: 75 PPLAQVTSIESR-YVKPVGFSDFRVRHSDSNGEKTALILPDIATCPECQAELFDPKDRRY 133 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPRF+I+ +PYDRP T M FPLCP C KEY P RRFHAQP+AC C Sbjct: 134 RYPFINCTNCGPRFSIVETLPYDRPNTTMKRFPLCPLCQKEYDAPEHRRFHAQPIACSTC 193 Query: 185 GPHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP LE+ + G A + AL+ A + G ++A+KG+GGF L DARN++A+A LR Sbjct: 194 GPTLEFWNKATGPCAHGDEALKMAEHLVSSGHVLALKGVGGFQLIVDARNADAIARLRKC 253 Query: 243 KHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K R KPLA+M P L R+LL +PA+PIVL+ K+ D +AP + + Sbjct: 254 KGRGPKPLAIMCPDLGYTRSICHLSALERKLLLSPASPIVLLKKR--SRAFDAVAPGMRD 311 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP +PL HLL+++L P+V TSGN S +P I NE+A+ L IAD FL+H+R I Sbjct: 312 YGVMLPCSPLHHLLMRDLGYPIVATSGNRSEEPICIENEEAIERLSDIADAFLMHDRPIA 371 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFK-NVPPVLCLGADLKNTFCLVRGEQ 412 + +DDS+ R ++LRR+RGY P LP +P + LGA LKN+ +V + Sbjct: 372 RHVDDSIARVILGDVQILRRARGYAP----LPINVDLEIPSCIALGAHLKNSVAIVAQNK 427 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 +SQH+G+L + R + +YD P +V HD HP YVS+ +AR L + Sbjct: 428 IFISQHIGNLETAESYRAFETTARDLPILYDCQPTFVAHDKHPDYVSTFYARGTPLERIS 487 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH AH +C+A++Q V+ ++ DG G G++ ++WGGE + + + Sbjct: 488 VQHHLAHVYSCMADNQL---QAPVLGISWDGTGYGDDKSVWGGESFLIEDSAERRVSSIT 544 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPE-WQNYSETASVQ---QQNWSVLARAIERGINA 588 L GGD+AA QP R LA P+ +Y++ +++ + +L + + N Sbjct: 545 QFPLLGGDIAALQPRRVALALLQASFPKSLGDYAKLPALRAFTASEYRILEQITLKHRN- 603 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC--HGVTHPVTMPRVDNQLD 646 PL SS GR FD V++ LG T +EG+AA LE LAA+ + + +P + +Q Sbjct: 604 PLTSSIGRLFDGVSSILGIC-QTNRFEGQAAALLEFLAATAPKNQLPYPYIL---HDQGG 659 Query: 647 LATF-WQQWL-----NWQAPVNQRAWA--FHDALAQGFAALMREQATMRGITTLVFSGGV 698 TF W+ + + VN A FH Q AA + A+ G+ ++ +GG Sbjct: 660 FTTFDWKPMIRAIVEEYTNGVNPPIIAARFH----QTLAAYAVDIASRHGVPSIALTGGC 715 Query: 699 IHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQG 735 + NRLL +A L + F + +P DGG+ +GQ Sbjct: 716 MQNRLLCELIAETLKENGFNPFIHRRVPPNDGGICVGQA 754 >UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLW6_DESAH Length = 733 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 297/737 (40%), Positives = 409/737 (55%), Gaps = 51/737 (6%) Query: 41 NDGDGVEVRLREDPETF---LVQLYQHCPPLARIDSVEREPF-IWSQLPTEFTIRQSTGG 96 N GV + L DP+ ++ + PPLA + +V EP + S+ Sbjct: 3 NTAQGVTLILEGDPDNIAPCCKKIKESGPPLAIVSTVNVEPTGVRGYDDFRIITSASSNQ 62 Query: 97 TMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAF 156 + I PD + C ACL EMN P RR+ YPFINCT+CGPR+TII+ +PYDR T MA F Sbjct: 63 PRSALISPDVSVCQACLDEMNDPTNRRHGYPFINCTNCGPRYTIIKDLPYDRAKTSMAEF 122 Query: 157 PLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVS--HGEHAEQEAALQAAIAQLKMGK 214 +CP C EY DPL+RRFHAQP AC CGPH+ W++ G + A+ AA L G Sbjct: 123 TMCPDCQAEYDDPLNRRFHAQPNACEVCGPHV-WLTDNRGVVLLNKGAITAAGEHLNQGA 181 Query: 215 IVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAAR------QLL 268 IVA+KG+GGFHL +A + AV LR RK+RP KP A+M + L + LL Sbjct: 182 IVAVKGLGGFHLGVNAFDEAAVMALRTRKNRPHKPFALMARDLETLRKYTKVTQPEEALL 241 Query: 269 TTPAAPIVLVDKKYVPE-----LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSG 323 T PIVL++K + L +AP +G+MLP PL HLL + LVMTSG Sbjct: 242 TAFHRPIVLLEKYKCTDPGGRPLASGLAPGNRRLGIMLPYTPLHHLLFETGPEMLVMTSG 301 Query: 324 NLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV--RESGEMLRRSRGYVPDA 381 N SG+P +I N+ AL+ IAD FL+HNR+I R DDS+V ++ LRRSRGY P Sbjct: 302 NRSGQPLSIDNDDALSAFAHIADFFLLHNREIYFRADDSIVQYQKGTRFLRRSRGYAP-- 359 Query: 382 LALPPGFKN-VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQN 440 LP K+ +P VL G LK+T CLV+ +A LSQH+GDL D+ +++++ ++ Sbjct: 360 --LPVSLKHRIPQVLACGGGLKSTVCLVKENRAFLSQHIGDLDDEKSFEFYKKSVDHLKT 417 Query: 441 IYDFTPQYVVHDAHPGYVSSQWAREMN-LPTQTVLHHHAHAAACLAEHQWPLDGGD--VI 497 I D P V HD HPGY+S+ +AR + + T V HHHAHAAAC+AE +G D V+ Sbjct: 418 ILDIRPGIVAHDLHPGYMSTTYARALKGVETIGVQHHHAHAAACMAE-----NGLDEPVV 472 Query: 498 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWR---NLLAQC 554 A+TLDG G+G + +WGGE L E L +V +PGGD AA +PWR + L C Sbjct: 473 AVTLDGTGLGTDNTIWGGEILTCTLDRFERRAHLLSVPMPGGDKAATEPWRMGISWLYHC 532 Query: 555 LRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSY 614 L + ++ + + L + ++R IN P+ SSCGR FDAVAA LG +++ Sbjct: 533 LGPGVADLDTPLVRTIDPEKIAFLIQMMDRRINCPMTSSCGRLFDAVAAILGLG-HHVTF 591 Query: 615 EGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN------WQAPVNQRAWAF 668 E +AA ALEAL+ + + + + + + + F + L + F Sbjct: 592 ESQAAMALEALSTAEDDKGYKIDIQTDETGMLVMDFSRAILGIVDDLALGLSIPNLGSKF 651 Query: 669 HDALAQGF---AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSL 723 H+ + F AA + EQA ITT V SGGV +NR++ ++ L D FT+ + Sbjct: 652 HNTVVDSFVRSAARVGEQAH---ITTAVLSGGVFNNRIILRKMTDGLRDLGFTVYSHTRV 708 Query: 724 PAGDGGLSLGQGVIAAA 740 P GDGG+SLGQ V+A A Sbjct: 709 PCGDGGISLGQAVVAGA 725 >UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Clostridium botulinum RepID=B2TM80_CLOBB Length = 783 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 264/781 (33%), Positives = 416/781 (53%), Gaps = 69/781 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETFLVQLYQHCPPLA 69 + G+VQGVGFRPFV+++A + N+ G V N +GV++ L E+ ++F++ L CP + Sbjct: 9 VNGRVQGVGFRPFVYRIACKNNIKGYVKNTCNGVQIDVEGLEENIKSFIMDLDSKCPKVC 68 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEM-NTPGERRYRYP 127 +I+ ++ + +F I +S T I PD A C C E+ N ERRY Y Sbjct: 69 KINEIDINDIKYMNYYNDFQILESDNNYKGETLISPDIAICDECYKELFNISEERRYLYS 128 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPRFTII+ +PYDR T M F + C EY D L+RRFHA+P C CGP Sbjct: 129 FINCTNCGPRFTIIKKLPYDRCNTTMKKFVMYNKCRSEYYDKLNRRFHAEPTCCVNCGPK 188 Query: 188 LEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L+ V G + + L+ LK G+I+A+KGIGGF+L CD +N +++ LR RK+RP Sbjct: 189 LKLVDRFGRKIKCDDVLRITRQYLKEGRIIALKGIGGFNLICDGKNKSSIDVLRKRKNRP 248 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 KPLA+M+ D + + ++L PI+L++K+ L +I N++G++ Sbjct: 249 QKPLALMMRDIDVVNKYCFVNEKENEILQGSKKPIILLNKR-ENNLPKNIVFKNNKLGIV 307 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP +PL LL LV TSGN++ P N++A +L IAD FLIH+R+I +D Sbjct: 308 LPYSPLHVLLFDNELEVLVFTSGNINQMPIEYKNDEAFNNLNDIADYFLIHDREINASID 367 Query: 361 DSVVR--ESGEMLRRS-RGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ + E++ RS RGY P ++ VL LG+ LKNT + G +S Sbjct: 368 DSVVKVFMNKELVIRSGRGYAPISIRSNSE----EGVLALGSQLKNTLSISSGNNIFISP 423 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW---------AREMNL 468 ++GD+ + +++ L+L++++YD + +D HP Y ++ + +E N+ Sbjct: 424 YVGDMENLETIDRFKRNLKLIRSLYDIKINTICYDMHPNYFNNYFLEDNLNDMDIKESNM 483 Query: 469 PTQT--VLHHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 + + HHHAH A+C+ ++ Q P VI + DG G GE+ +WGGE L +Y++ Sbjct: 484 KFKKIGIYHHHAHIASCMFDNDIQEP-----VIGIAFDGTGYGEDKKIWGGEFLICDYKK 538 Query: 525 CEHLGGLPAVALPGGDLAAKQPWR------------NLLAQCLRFVPEWQNYSETASVQQ 572 + +G L + LPG D K PW+ N++++ L ++NY+ Sbjct: 539 FKRVGCLKYMNLPGNDGGIKMPWKMGMSLLKGALKNNIVSKNLNI---FKNYNLPDCFNL 595 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----- 627 +N+ ++++ I+R IN SS GR FD VA+ LG ++YEGEAA LE +A+ Sbjct: 596 ENYELISKIIDRNINTSETSSMGRLFDGVASLLG-FTNNVTYEGEAAIYLENIASTYIIN 654 Query: 628 ---SCHGVTHPVTMPRVDNQ--LDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAAL 679 S + +++ + D + +DL + L + + + FH+ + + L Sbjct: 655 SVESVYKLSYSYNLKFNDEKYIIDLDEMILEILEDLKNEESLGLISIKFHNTITEFSIDL 714 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVI 737 ++ I + SGGV N +L L L DF +L +P D G+SLGQ +I Sbjct: 715 CKKLRKQYNINKVALSGGVFQNDILLKNLYLKLEENDFNVLIHGEIPCNDSGISLGQLII 774 Query: 738 A 738 A Sbjct: 775 A 775 >UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein HypF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A6B Length = 818 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 310/810 (38%), Positives = 412/810 (50%), Gaps = 91/810 (11%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPET--FLVQLYQHCPP 67 +R+ G VQGVGFRP+V++LA++L L G V ND GV + ED FL L + PP Sbjct: 1 MRVEGVVQGVGFRPYVFRLAEELGLAGFVLNDVHGVLAEVEGEDAAVARFLALLPERAPP 60 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LAR++ V F I +S GGT + ++ PD ATC CLAE++ P +RR+RY Sbjct: 61 LARVEGVAVRDLDPVGDGGAFAIVESVAGGTPDARVSPDTATCDDCLAELSDPADRRFRY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF+NCT+CGPRFTI+R +PYDRP T MA+F +C AC EY DP DRRFHAQP ACP CGP Sbjct: 121 PFLNCTNCGPRFTIVRGVPYDRPATTMASFAMCAACRAEYDDPRDRRFHAQPNACPACGP 180 Query: 187 HLEWV-SHGEHAEQEAALQAAIA----------------QLKMGKIVAIKGIGGFHLACD 229 + + G A A+ +L G+IVA+KG+GG+HLAC Sbjct: 181 RARLLDAEGREIADAPASPDAVGPADAPAFPDAVAAAAAELLAGRIVAVKGVGGYHLACR 240 Query: 230 ARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVL-----V 278 A VA LRARK R +P A+M+ L +A +LL + A PIVL Sbjct: 241 ADEERVVAALRARKRREQRPFALMVASVAAARALVELGEAEERLLCSRARPIVLAARRAD 300 Query: 279 DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQA 337 + D +AP E+G+MLP PL LLL + PLVMTSGN+S +P A + +A Sbjct: 301 GGAAGARVADAVAPGAPELGLMLPYTPLHQLLLTDAGGVPLVMTSGNVSDEPIAFDDAEA 360 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVR-------ESGEMLRRSRGYVPDALALPPGFKN 390 L L IAD L+H+R I R DDSV+R LRRSRG+VPD +ALP Sbjct: 361 LRRLGAIADLLLVHDRPIATRTDDSVMRVVEVAGARRPLPLRRSRGFVPDGIALP--LTA 418 Query: 391 VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV 450 P+L GA+LK+TFCL +G A + H+GDL + + +R+ + + ++ TPQ V Sbjct: 419 TRPILACGAELKSTFCLAKGTTAWVGHHIGDLQNYATERSFRDGIAHFERLFAVTPQLVA 478 Query: 451 HDAHPGYVSSQWAREMN-LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN 509 HD HP Y S+ +A E + T V HHHAH AACLAEH + G + DG G+G + Sbjct: 479 HDLHPDYRSTAYALEREGVETVAVQHHHAHLAACLAEHG---ETGTAVGAIYDGTGLGTD 535 Query: 510 GALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE--- 566 G +WGGE L + +G LP V+LPGGD AA++PWR A + + + Sbjct: 536 GTVWGGELLLGDLTGFARVGSLPPVSLPGGDRAAREPWRMACAWLIAAREDAAPPAAAPP 595 Query: 567 -------------------------------TASVQQQNWSVLARAIERGINAPLASSCG 595 + + W+ +AR G +P +S G Sbjct: 596 AAAPPAAAPPAAAPPAAAPPAAAPPPIPPALAGRIAPERWAAIARMAASGFASPPTTSMG 655 Query: 596 RFFDAVAAALGC-APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW 654 R FDAVAA G A +YEG+AA LEA+A + + + + Sbjct: 656 RLFDAVAALCGMRAAVAATYEGQAAIELEAIADRAERGAYELPLAPAPPGAPPLLLYAHV 715 Query: 655 LNWQAPVNQRAWA--------FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 Q + A FH ALA A + A+ G +V SGGV NRLL Sbjct: 716 TIRQVVADLAAGTQTGVVSARFHRALATATATACAQVASDAGTDLVVLSGGVFQNRLLLE 775 Query: 707 RLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 A L A +L P LP DGG+S GQ Sbjct: 776 ETAARLQAAGLHVLVPLQLPPNDGGISYGQ 805 >UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vinelandii RepID=HYPF_AZOVI Length = 776 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 314/776 (40%), Positives = 410/776 (52%), Gaps = 59/776 (7%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G+V N G GV + L P+ F Sbjct: 1 MNQPAEAGVRLLLRGRVQGVGMRPCVHRLATSLGLAGEVRNTGAGVRIDLLGPPQALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTI---RQSTGGTMNTQIVPDAATCPACLA 114 +L PPLAR+D+++REP F I R G + PDAA CPACL Sbjct: 61 ERRLPDELPPLARLDAIQREPLPAGTRFAGFAIAASRDERRGALAPP--PDAAVCPACLE 118 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E+ P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C +EY DP DRRF Sbjct: 119 ELFDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRVQTSLAGFELCPECRREYEDPADRRF 178 Query: 175 HAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 HAQP+ACP CGP L ++ A+A L G+I+A++G+GGFHLACDARN+ Sbjct: 179 HAQPIACPACGPRLCCEDASGRRLSGDPIERALAALARGEILALRGVGGFHLACDARNAG 238 Query: 235 AVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPE--L 286 AVA LR RK RPAKP A+M L L + L+ PAAP+VL+ K+ + L Sbjct: 239 AVAELRRRKRRPAKPFALMAANPASLQALVELNENGLAELSGPAAPVVLLRKRPAADDLL 298 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAI 332 +APDL +G MLP +PL LL E LVMTS NLSG PP Sbjct: 299 AAGVAPDLAWLGAMLPHSPLHWLLFHEAAGRPAGTGWAAAPQDLLLVMTSANLSGAPPIT 358 Query: 333 SNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFK 389 N +A L GIAD +L+H+R+I+ R DDSVV G ++R RG P + P + Sbjct: 359 GNAEARERLAGIADLWLLHDREILNRCDDSVVSALGRAPLVIRSGRGLAPLEI---PLAR 415 Query: 390 NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYV 449 P +L LG LKN CL RG++A LS H GDL D + + + P+ V Sbjct: 416 GGPSILALGGQLKNAVCLTRGDRAWLSPHNGDLDDADTCRALERTVARLGELLGIRPERV 475 Query: 450 VHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIG 505 D HP + +S++AR+ LP + HHHAH AA +AEH V+ L LDG G Sbjct: 476 ACDLHPDFFASRFARDYAERHGLPLHPIQHHHAHIAATMAEHGL---AEPVLGLALDGFG 532 Query: 506 MGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS 565 +G +G L GGE LRV C LG L + LPGGD A+++PWR + A L + + Sbjct: 533 LGADGRLRGGELLRVAADGCAWLGELNPLPLPGGDQASREPWR-MAAGALHALGRGGEIA 591 Query: 566 ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 + + N + +AR +ERG N P +SS GR FDA A LG YE EAA LE+ Sbjct: 592 TRFAAEPGN-AAIARMLERGFNCPPSSSAGRLFDAAAGLLGLG-GRQRYEAEAALRLESR 649 Query: 626 AASCHGVTHPVTMP---RVDNQLDLATFWQQWLNWQAPVNQRAWA--FHDALAQGFAALM 680 V P +P R+D+ + + RA A FH L + A Sbjct: 650 V-----VGLPERVPALWRIDDD-NRLDLLPLLARLADMRDTRAGAELFHGVLIEALAIWA 703 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 A G+ + GG N +LR L L A T L + P DGGL+LGQ Sbjct: 704 ARAAEATGLHRVALGGGCFLNTVLRDGLCARLRAAGLTPLLARRAPLNDGGLALGQ 759 >UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5I7_9EURY Length = 725 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 283/748 (37%), Positives = 412/748 (55%), Gaps = 53/748 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP-ETFLVQLYQHCPPL 68 ++R+ G VQGVGFRPF++ LA+ NL G V N G VE+ + D E+F+ + + P L Sbjct: 3 RIRVEGIVQGVGFRPFIYNLAKSYNLKGYVKNCGTYVEIVVSGDNIESFIKDIERKKPEL 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 A+I+ + E F ++ ++F I +S G N+ I PD A C CL EM +RRYRYPF Sbjct: 63 AKINKIVVEDFEGNEF-SDFYILESDGFGGNSAIPPDIAICNLCLKEMFDKKDRRYRYPF 121 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+C +CGPRFTI +P+DR T M FPLC C KEY DP DRRFHAQ CP+CGP + Sbjct: 122 ISCINCGPRFTITEKLPFDRENTSMKDFPLCEECLKEYEDPRDRRFHAQTTCCPKCGPRV 181 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 E + A++ AI L+ GKI+AIKGIGG+HL C A V LR +RP++ Sbjct: 182 FL----NDKEGDEAIKEAIKLLEKGKILAIKGIGGYHLFCRADRDEPVLRLREILNRPSQ 237 Query: 249 PLAVMLPVADG-----LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P AVM + + L LLT+ PIV++ K L + ++ +L+ VGVMLP Sbjct: 238 PFAVMSLIEEVKKFAILSKEEEILLTSRERPIVVLKKSKDYYLSEYVS-NLDTVGVMLPY 296 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 L +LL ++ V TS NL G P AI +E + L+ DG+L+HNR I+ R DDSV Sbjct: 297 TGLHYLLFNKVPA-YVATSANLPGLPMAI-DEGEIVKLK--VDGYLMHNRRIINRCDDSV 352 Query: 364 VRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 V+ LRRSRGYVP+ + + KN LC+GA+L +T CLV+G + LSQH+G Sbjct: 353 VKYIAGRAIFLRRSRGYVPEPIEVE--IKNDFTFLCVGAELNSTVCLVKGNKFYLSQHIG 410 Query: 421 DLSDDGIQMQWREAL-RLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLH 475 + S + +EA+ RLM+ ++V D HP Y S++ A E+ N+P V H Sbjct: 411 NTSKYETFLFLKEAIKRLMELTNTDKIDFIVSDLHPLYNSTKLAEELSEKFNVPLIKVQH 470 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AH + L ++ + + I L LDG+G G +G +WGGE L+ + + + +G L Sbjct: 471 HFAHGYSLLGDNNY---FDECIILALDGLGYGLDGKIWGGEILKFDSGKFKRVGHLEEQY 527 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 PGGDLA K P+R LL+ + + + E V + +L I++ IN+P+ +S G Sbjct: 528 QPGGDLAVKYPFRMLLSILYKAIGD--EVFEKFEVNK----ILEMQIKKRINSPITTSTG 581 Query: 596 RFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT-FWQQ 653 R DA+++ L C T YEGE A LE A + P++ N + L T ++ Sbjct: 582 RVLDAISSLLDICQEKT--YEGEPAIRLEGRAKEFNIEVE----PKIKNNILLTTPLVEE 635 Query: 654 WLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 N + P+ + A+ LA G + ++ + GIT GGV +N+++ R+ Sbjct: 636 CYNMLINKEPIEKIAYYSLIYLADGLFEIAKKFSDTIGIT-----GGVSYNKIIVERIKE 690 Query: 711 YLAD--FTLLFPQSLPAGDGGLSLGQGV 736 + L+ +P GDGG+S GQG+ Sbjct: 691 RCEEEKIKFLYHSRVPNGDGGISFGQGL 718 >UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BTW9_9ACTO Length = 774 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 299/764 (39%), Positives = 402/764 (52%), Gaps = 57/764 (7%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPPLA 69 +RG VQGVGFRP V ++A Q + G V ND + V + RE + F+ + PPLA Sbjct: 17 LRGVVQGVGFRPHVAKVAAQYPITGFVGNDDESVFIEAQGAREAVDGFMETMLATLPPLA 76 Query: 70 RIDSVEREPFIWSQLPTEFTI---RQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 + + TEF I R+ G T I PD ATCP C AEM P RRYRY Sbjct: 77 SVLHSSSTDLPEQKGETEFRIVPSRRRPGA--RTLIPPDTATCPDCQAEMADPTNRRYRY 134 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT+CGPR TI+ +PYDR T M FP+CPAC +EY +P +RR+HAQPV+C +CGP Sbjct: 135 PFTTCTNCGPRATIMVDLPYDRDTTTMVKFPMCPACHQEYTNPTNRRYHAQPVSCYDCGP 194 Query: 187 HLEWVSHGEHAEQ-----------EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 L WVS + + AAL A +L+ G+I+A+KGIGGFHL CDARN A Sbjct: 195 VL-WVSPADAPDLWPPEGDRRPLIAAALDEARQRLRAGQILAVKGIGGFHLMCDARNEAA 253 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDA------ARQL--LTTPAAPIVLVDKKYVPELC 287 VA LR RK R KP AVM VAD + A A QL L T A PIV+ +L Sbjct: 254 VARLRKRKDRGDKPFAVM--VADAVTAARLARLDADQLRTLQTAARPIVIAPFGQEYDLA 311 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQC---PLVMTSGNLSGKPPAISNEQALADLQGI 344 +AP L +VG++LP PL HL L +C LV TSGNL+G+P +N+ A L GI Sbjct: 312 PAVAPGLGDVGILLPYAPL-HLELLSGECAQMALVATSGNLAGEPLCFTNQDAAERLAGI 370 Query: 345 ADGFLIHNRDIVQRMDDSVVRESGEML---RRSRGYVPDALALPPGFKNVPPVLCLGADL 401 D F+ H+RDI M+DSV + ++ RRSRGY P +AL P+L +G +L Sbjct: 371 VDAFVFHDRDIHLPMEDSVFLANAQVTIPSRRSRGYAPLPVALSQ--PATVPILAVGGEL 428 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNTFCL G A +S H+GD+ Q + A+ + N P+ VV D HP Y + Sbjct: 429 KNTFCLAHGSWAHISGHIGDMGTLASQEAFDRAVTQLLNFQRQRPEKVVCDLHPNYSTVS 488 Query: 462 WAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 WA ++ V HH AHA + LAEH LD + +++DG G G +G +WGGE Sbjct: 489 WAERFAASHDIELTQVQHHVAHAYSLLAEHSC-LD--PAVVVSVDGTGYGTDGTIWGGEV 545 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ---- 573 L + + + +P +L GGD A + PWR L + +W +A + Q Sbjct: 546 LDIRGAQWQRSAHVPTFSLVGGDRAVRYPWRVALGIAHDWGMDWITEKISAEIGSQPGKS 605 Query: 574 -NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 ++ + G +SCGR FDA AA LG ++YE +AA LE +A S Sbjct: 606 TELELVKSQLASGFGVSATTSCGRLFDAAAAILGIR-TEVTYEAQAAMELEHVATSWANA 664 Query: 633 THPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 ++P+V + +L ++ PV +RAWAFH LAQ + A T+ Sbjct: 665 HPEASLPQVGSYQELV---EKLGEVDRPVGERAWAFHVGLAQLLGEQACQVAEQADTKTV 721 Query: 693 VFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 +GGV NR+ +L + +L Q++P DGGLSLGQ Sbjct: 722 GLTGGVALNRMFTRHFVSFLGEGGCRVLTHQNVPPNDGGLSLGQ 765 >UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q1NVR2_9DELT Length = 820 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 319/815 (39%), Positives = 410/815 (50%), Gaps = 96/815 (11%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLARI 71 RI G VQGVGFRPFV++LA++ L G V ND GV + E P L P A Sbjct: 20 RIGGVVQGVGFRPFVYRLAREHALAGRVYNDAAGVVIEA-EGPAAALAAFGAALPAQAPP 78 Query: 72 -----DSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 D V E + Q + F I S G + PD ATC C E+ P +RRY Sbjct: 79 AAVLADLVSEE--MAPQGGSAFRIEVSRQAGVPLAGVAPDLATCADCRRELFDPADRRYL 136 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR+TII +PYDRP T M F +CPAC EY +P +RRFHAQP ACP CG Sbjct: 137 YPFINCTNCGPRYTIIEKIPYDRPHTSMGRFTMCPACQAEYDEPANRRFHAQPNACPHCG 196 Query: 186 PHLEWV------------------SHGEHAEQEAA--LQAAIAQLKMGKIVAIKGIGGFH 225 PHL+ + + G ++ ++ AA L+ GKIVAIKGIGGFH Sbjct: 197 PHLQLLLAQKMGTDLFFEPAALSTTDGVASKNKSVPIFAAARQLLRQGKIVAIKGIGGFH 256 Query: 226 LACDARNSNAVATLRARKHRPAKPLAVMLPVAD--------GLPDAARQLLTTPAAPIVL 277 LA DA N AVA LR RK R KPLA+M V D L + A + L +PA PI+L Sbjct: 257 LAVDAANQEAVANLRRRKGRQHKPLALM--VGDLATARRLVQLDERAERELCSPARPILL 314 Query: 278 VDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQA 337 ++ L +AP GVML PL HLLL + LVMTS N +P I + +A Sbjct: 315 ALQQPEHGLAPAVAPGHGRFGVMLAYTPLHHLLLTDQLPVLVMTSANPGSEPLCIDDREA 374 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVRESGE----------------MLRRSRGYVPDA 381 + L GIAD + H+R IV+ DDSV+ S +RR RG+ P Sbjct: 375 IDRLAGIADAIVGHDRPIVRSNDDSVLFFSQPPAVDATAPLEPVAAPVFIRRGRGFAPQV 434 Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 L L P +L +GA+LKNT CL ++AVLSQHLGDL + ++ + + ++ Sbjct: 435 LPLA---GEGPALLGVGAELKNTVCLATADKAVLSQHLGDLQNLATYELFKRTIGDLASL 491 Query: 442 YDFTPQYVVHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 497 +PQ V D HP Y+SS QWARE LP V HHHAH AACLAEH P G I Sbjct: 492 LAISPQAVACDLHPDYLSSRWARQWAREHRLPLLPVPHHHAHLAACLAEHHHP---GPAI 548 Query: 498 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC--- 554 L LDG G G +G +WGGE L + G L + LPGGD A +PWR LA Sbjct: 549 GLILDGTGYGPDGTIWGGEILLGDVAASTRFGHLETMPLPGGDAAVAEPWRTGLAYLQQA 608 Query: 555 -------LRFVPEWQNYSETASVQQ-------QNWSVLARAIERGINAPLASSCGRFFDA 600 L F+ E +T V Q Q ++ + + IN PL SSCGR FDA Sbjct: 609 FADKIPDLPFLNESGENGDTIPVFQTGIPTYCQRQQMVLAMLAKKINCPLTSSCGRLFDA 668 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ--------LDLATFWQ 652 VAA G + YE +AA L LA G+ P +++++ L Sbjct: 669 VAAICGVC-HRIDYEAQAAIELMELAG---GLASPAFSYQIESRPAGIVLAIRPLVRDIA 724 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 Q + V + FH L + F+A +R A G T+ +GGV+ N +L L L Sbjct: 725 QAMAAGGDVATISRRFHYTLVELFSAGVRRAAAASGHQTVALAGGVMQNMVLLQGLRQSL 784 Query: 713 --ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + T+L PQ LP DG ++ GQ +A R +G Sbjct: 785 QASGLTVLVPQKLPPNDGAIAYGQVAVARQRIKSG 819 >UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABW2_CARHZ Length = 754 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 279/760 (36%), Positives = 403/760 (53%), Gaps = 48/760 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ + G VQG+GFRPF+W++A++ + G V N GVE+ E+ FL + + P Sbjct: 6 KIVVSGLVQGIGFRPFIWRIARKWEIKGWVKNSLAGVEILAEGEEENVNKFLAAIKKEKP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYR 125 PLA I+ + P S F I +S IVP D C CL E+ +RRY+ Sbjct: 66 PLAVIEKISVIPLNLSGNFETFEIIESQRDRKGVLIVPADLPVCGDCLQELRDSSDRRYQ 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR+TII +PYDRP T M FPLCP C KEYR+P DRRFHA+PVACP CG Sbjct: 126 YPFINCTNCGPRYTIIEKLPYDRPHTSMKIFPLCPECAKEYRNPEDRRFHAEPVACPACG 185 Query: 186 PHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L ++ A+ + LK G IVA+KG+GG+HLA D N V LR RK Sbjct: 186 PRLFLYDKEKNLLAKDGEVIHKTQELLKKGFIVALKGLGGYHLAADPFNVKTVLLLRQRK 245 Query: 244 HRPAKPLAVM---LPVADG---LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 HR AKP A+M L VA + A +LLT+ PIVL KK ++ +++PD + + Sbjct: 246 HREAKPFALMVKNLTVAKKHVYISKAEEKLLTSNVCPIVLCRKKKSSKIVKEVSPDNDYL 305 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G+MLP P +LLL+ + L+MTS NLS +P +++ L+ IAD F+++NR I++ Sbjct: 306 GIMLPYTPFHYLLLEHFEA-LIMTSANLSEEPIVYQDDEVFLKLKDIADFFVVNNRPILR 364 Query: 358 RMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 +DDSV ++S +LRR+RG P L + G K +L LG LKN+F + + Sbjct: 365 PVDDSVAMVYKKSPVILRRARGLAPLPLKV-RGMKE--GILALGGQLKNSFAITKDNYVY 421 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM--NLPTQT 472 LSQ+ GDL + ++ + + + ++FTPQ V +D HPGY SS+ E L Sbjct: 422 LSQYFGDLDNLPSRLAYMKGIDDFCRFFEFTPQIVAYDLHPGYFSSELVEEKYSKLKKCP 481 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV----NYRECEHL 528 + HH AH AA +AE + + + DG G GE+G +WGGE +Y+ HL Sbjct: 482 IQHHKAHLAAVVAEKRIK---APFMGVIFDGTGYGEDGMIWGGEFFVAFTPEDYQRIAHL 538 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIER-GIN 587 P L GD A K+PW++ L+ + E Q Q L A +R Sbjct: 539 KYFP---LLDGDEAIKKPWKSALS----LLNEVQVDVANLIFQDIERMELEFAQKRLAKQ 591 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA----ASCHGVTHPVTMPRVDN 643 SS GR FD ++A LG T+SYEG+AA LE +A C+ T + ++ Sbjct: 592 KIFTSSVGRLFDGISALLGLK-TTISYEGQAAILLETIADRSERGCYDFT--ILQEKIPY 648 Query: 644 QLDLATFWQQWL-NWQAPVNQRAWA--FHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 ++D L + + VN++ + FH+ + + A L + GI ++ +GGV Sbjct: 649 EIDFRPLLLDVLADLKKGVNKKVISGKFHNTIVEMIAGLGKIVNKQYGIQKVILAGGVFQ 708 Query: 701 NRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIA 738 NR+L + L L + P +P D G++LGQ +A Sbjct: 709 NRVLLEKTFISLKRLGLKPIIPSYIPINDQGIALGQAYLA 748 >UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Methanococcales RepID=HYPF_METJA Length = 766 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 278/768 (36%), Positives = 415/768 (54%), Gaps = 61/768 (7%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHC 65 V+++++G VQGVGFRPFV+++A++ NL G V N G+ VE+ + +ED F+ L Sbjct: 12 VRIKVKGIVQGVGFRPFVYRIAKKNNLKGYVKNMGNYVEILIEGKKEDIRNFINDLKNKK 71 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ--IVPDAATCPACLAEMNTPGERR 123 PPL+RID ++ E + +F I +S + I D A C CL EM +RR Sbjct: 72 PPLSRIDKLDIEEIKGIEEFDDFYIIKSENAKDEEEGTIPADVAICDDCLKEMLDKNDRR 131 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFI CT+CGPRFTI+ +PYDR T M FPLC C +EY++PLDRRFHAQ CP Sbjct: 132 YRYPFIACTNCGPRFTIVEKLPYDRENTSMRDFPLCEKCLEEYKNPLDRRFHAQATCCPI 191 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + ++S G+ AE++ A++ + L+ G I+AIKGIGG HLAC + V LR Sbjct: 192 CGPKV-FLSDGKEIIAEKDEAIRETVKLLEEGHILAIKGIGGTHLACKVGEDDVVLELRK 250 Query: 242 RKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 R RP +P AVM + A+ D LL+ +VL + + +L+ Sbjct: 251 RLGRPTQPFAVMSKIEYTELFAEFDEDEKNALLSLRRPIVVLKKSQDYDKYFSKYVSNLD 310 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVM P + L +LL + + VMTS NL G P N++ L L GIAD FL+HNR I Sbjct: 311 TIGVMFPYSGLHYLLFDK-EIAYVMTSANLPGLPMVKDNDEILKKLNGIADYFLLHNRRI 369 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V R DDSVV++ + LRRSRG+ P+ + + N +LC+GA+L +T C+V+ ++ Sbjct: 370 VNRCDDSVVKKVADRLVFLRRSRGFAPEPVKVNI--NNNKNILCVGAELNSTACIVKRDK 427 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP----QYVVHDAHPGYVSSQWAREMN- 467 L+Q++G+ S R+A+ NI T +V D HP + S++ A E++ Sbjct: 428 FYLTQYIGNTSKYETFCYLRDAI---NNILRLTNTNKIDAIVCDLHPQFNSTKLAEELSE 484 Query: 468 ---LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 V HH AHA + L ++ + D I L+LDG+G G +G +WGGE L + Sbjct: 485 KFGAEIFRVQHHFAHAYSLLGDNNY---FDDAIILSLDGVGYGLDGNIWGGEVLLFKDGK 541 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLA--------QCLRFVPEWQNYSETASVQQQNWS 576 E +G L GGDLA K P R LL+ + F+ + +SE + Sbjct: 542 MERVGHLEEQYQLGGDLATKYPLRMLLSILYKAIGEEAFDFIKRYNFFSE------KELR 595 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHP 635 +L +E+ +N P+ +S GR DAV+A LG C T Y+GE + LE +A G + Sbjct: 596 LLKFQLEKKLNCPITTSTGRVLDAVSALLGICFEKT--YDGEPSIRLEPVANRFKGDIN- 652 Query: 636 VTMPRVDNQLDLATFWQQWLNWQAPVNQR-----AWAFHDALAQGFAALMREQATMRGIT 690 P++ N + L T + +++ +N A H +A G + ++ + GI Sbjct: 653 -IEPKIKNNI-LNTTELIYKSYEMLLNNENKEKIAHFAHIYIADGLFEIAKKISNKFGIN 710 Query: 691 TLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 T+ +GGV +N+++ R+ + F ++ Q +P GDGG+S GQGV Sbjct: 711 TIGITGGVSYNKIITERIMNNAKREGFNFIYHQRVPNGDGGISFGQGV 758 >UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales RepID=HYPF_RHILV Length = 759 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 304/752 (40%), Positives = 395/752 (52%), Gaps = 68/752 (9%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCPPLARIDS 73 G VQGVGFRPF ++LA+ + L G V ND GV + + D F + PPLARIDS Sbjct: 22 GAVQGVGFRPFAYRLARAMRLSGFVLNDSAGVLIEIEGRDANHFPEAVRTQAPPLARIDS 81 Query: 74 VEREPFIWSQLPT---EFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFIN 130 ++ + +P F I +S GG T+I DAATC C E+ P R + YPF+N Sbjct: 82 ID----VLELVPAGGERFEILESLGGRSATRIGADAATCDGCRRELTDPASRFFGYPFVN 137 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW 190 CTHCGPRFTI RA+PYDR T MA+FP+C C +Y DP +RRFHA+PVACP CGP L Sbjct: 138 CTHCGPRFTITRALPYDRAHTSMASFPMCRTCAADYVDPENRRFHAEPVACPNCGPRL-- 195 Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPL 250 H +E + A+L+ G IVA+KG+GGFHL CDARN A+ LR RK KP Sbjct: 196 ----SHPIKEIS-----ARLEGGAIVALKGVGGFHLLCDARNDGAIGLLRLRKAGDQKPF 246 Query: 251 AVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 AVM+ + AR LL +PA PIVLV + EL IAP L VG+ML Sbjct: 247 AVMVRDIEAARQLARPNEAEEALLISPARPIVLVAAR-AGELSGLIAPGLTRVGLMLAYA 305 Query: 305 PLQHLLLQEL-------QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 P+ HLLL EL LV TS N G+P N+ A L IAD + H+RDIV Sbjct: 306 PVHHLLLDELSRSSPHCHAALVATSANPGGEPLVADNDDAGRRLVAIADLVVTHDRDIVV 365 Query: 358 RMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R DDS V+ + +RR+RG+VP+ + L + P V+ GADLKNT C+ RG +A Sbjct: 366 RADDSVMQVIDGAPAFIRRARGFVPEPVDLG---ADGPSVIATGADLKNTICVTRGREAF 422 Query: 415 LSQHLGDLSD-DGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 LSQH+G L + + I+ Q RE + + +I D P++ D HP + S + A +NLP V Sbjct: 423 LSQHIGGLDNAEAIRFQ-REVIAHLCSILDVKPEFAACDLHPDFRSVRTAEGLNLPIVPV 481 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH AH AA +A+ + G V+ L LDG G G +G WGGE + +++ + G L Sbjct: 482 QHHLAHVAAVVADDRL---SGPVLGLALDGHGFGTDGTSWGGEIVVIDHHRWQRAGSLMP 538 Query: 534 VALPGGDLAAKQPWRNLLAQC-----LRFVPE-WQNYSETASVQQQNWSVLARAIERGIN 587 + LP GD AA++PWR +A + P+ W +S V Q L + Sbjct: 539 LPLPSGDRAAREPWRMGVAALQAAGRIDLAPQLWPGHS---GVTQ-----LTAMFSGSMP 590 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL--AASCHGVTHPVTMPRVDNQL 645 P+ SS GR FDA AA G YEG+AA EAL A C + + D L Sbjct: 591 TPVTSSLGRLFDAAAAIAGVR-LVQDYEGQAAMEFEALVRAPRCLAGGYSIG----DGTL 645 Query: 646 DLATFWQQWLNWQAPVNQRAW-AFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 D P A FH L G A A RG + GG + NR+L Sbjct: 646 DFRPLILHLAEQGRPCGADAADVFHGTLIAGLADWAARGAAARGTRQVALGGGCMMNRVL 705 Query: 705 RARLAHYLADFTL--LFPQSLPAGDGGLSLGQ 734 A LA L + L P+ PA DGG++LGQ Sbjct: 706 AAGLARALRERGLEPSLPRLAPANDGGIALGQ 737 >UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Clostridiales RepID=C9LW94_9FIRM Length = 787 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 300/796 (37%), Positives = 403/796 (50%), Gaps = 74/796 (9%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETF 57 MAK + +I G VQGVGFRPFV + A+ L + GDVCN G VEVR ++ + F Sbjct: 1 MAKKVLQTSRFKIFGIVQGVGFRPFVSRTAKALGITGDVCNKGSYVEVRAQGTKDALQDF 60 Query: 58 LVQLYQHCPPLARI-----DSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPAC 112 +L + P A I DS E+ PF +F I +S + + + PD A CP C Sbjct: 61 RKKLEKEPPERAVILKILQDSTEKAPFFH-----DFQIIESAHESGDVFVSPDIAICPKC 115 Query: 113 LAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDR 172 +E+ +RRY +PFINCT CGPR TI+ AMPYDR T M AFP+CPAC EY R Sbjct: 116 QSELFDKSDRRYLHPFINCTSCGPRLTILDAMPYDRERTSMGAFPMCPACRYEYTHAETR 175 Query: 173 RFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 R+ AQPV C +CGPH+ + G AA+ A L+ G IVA+KGIGGFHLACDARN Sbjct: 176 RYDAQPVCCNDCGPHVYLL--GGEERDHAAITRARHVLQAGGIVAVKGIGGFHLACDARN 233 Query: 233 SNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPEL 286 AV LR K RP KP AVML D L DA L PI+L++K ++ Sbjct: 234 EAAVQRLREHKSRPQKPFAVMLRGLDAVRRECRLSDAQEAHLDNHQKPIILLEKSGSGKI 293 Query: 287 CDDIAPDLNEVGVMLPANPLQHLL------LQELQCPLVMTSGNLSGKPPAISNEQALAD 340 +AP + +GVMLP PL LL L + LVMTSGN SG P +E AL Sbjct: 294 AASVAPAMPSLGVMLPYTPLHLLLFSLPDELADFTDCLVMTSGNPSGAPICRMDEDALDA 353 Query: 341 LQGIADGFLIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L IAD L H+R+I R DDSV+ + M+RRSRGY P L L F++ VL + Sbjct: 354 LSSIADLILSHDREIRLRADDSVMDFYDGAPYMIRRSRGYAPLPLMLSADFQD--SVLGI 411 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G +LKNTFCL + S +LGD+SD R+ L M+ + TP V D HP Y Sbjct: 412 GGELKNTFCLAKNSLFYPSPYLGDMSDLRTLRALRQTLPRMERLLAITPAAVAADLHPRY 471 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAE--HQWPLDGGDVIALTLDGIGMGENGALWGG 515 +S++A + LP V HHHAH + +AE H P VI ++ DG G G +G +WGG Sbjct: 472 ETSRFAETLGLPIFKVQHHHAHVLSVMAENDHLSP-----VIGVSFDGTGYGTDGTIWGG 526 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA----QCLRFVPEWQNYSETASVQ 571 E + R+ + L L GGDLAA++ WR ++ C R + + + Sbjct: 527 EIMLATTRDFQRLASLAPFFHAGGDLAAREGWRLAVSLLHLYCGREDALLHSKKLGLATE 586 Query: 572 QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG 631 ++ SV+ + +E G++ +++S GR FDAV+A LG + +YEGEAA L+ A + Sbjct: 587 KEAASVIFQ-LENGLHTTISTSAGRLFDAVSALLGIRRIS-TYEGEAAVYLQFAAEAAEK 644 Query: 632 VTHPVTMP------RVDNQL---------------------DLATFWQQWLNWQAPVNQR 664 + + D L DL Q+ + Sbjct: 645 AGNSAQADALLARWKADGTLQATPAESAITITDGRFLLTSNDLFCHLLQYRLQNVSSDLL 704 Query: 665 AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQS 722 A AFH LA + M G +T +GGV N LL + L F +L Sbjct: 705 ALAFHRGLAAAIRDACKNAREMTGCSTAALTGGVFQNTLLLRLTQNALKKDGFHVLHHSI 764 Query: 723 LPAGDGGLSLGQGVIA 738 +P DGG+++GQ + A Sbjct: 765 IPPNDGGIAVGQALFA 780 >UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5F1_GEMAT Length = 859 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 317/836 (37%), Positives = 413/836 (49%), Gaps = 121/836 (14%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHC 65 V +R+RG VQGVGFRPFV +LA +L G+V N GDGV V L +P E FL L + Sbjct: 19 VVVRLRGTVQGVGFRPFVHRLAIRLGARGEVRNVGDGVLVELEGEPGVIEQFLAALSREA 78 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ----------------IVPDAATC 109 P ARI+S+E + ++ P + G + + + PD ATC Sbjct: 79 PRAARIESME----VHAEQPQGVKGFRIAGSRTHDEAMPGNGKVLAFARVAAVPPDLATC 134 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 C E + P +RRYRYPF+NCT CGPRFTI+ +PYDR T M F +C AC +EY DP Sbjct: 135 SDCWREFHNPADRRYRYPFLNCTQCGPRFTIVIGVPYDRALTTMRRFTMCVACQREYDDP 194 Query: 170 LDRRFHAQPVACPECGPHLEW----------------VSHGEHAEQEAALQAAIAQLKMG 213 RRFHA+P AC +CGP + W V H A E AL+AA+ L+ G Sbjct: 195 THRRFHAEPNACADCGPQVAWSVVRRADTDMREPALPVVHATDARNENALRAALTVLRAG 254 Query: 214 KIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPD------AARQL 267 IVA KGIGG+HL CDARN++AVA LR RK RP KPLAV++ L +A Sbjct: 255 GIVAAKGIGGYHLLCDARNADAVARLRLRKDRPHKPLAVLVDTLSTLRTFADVRASAVVS 314 Query: 268 LTTPAAPIVLV--DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNL 325 L +PA PIVLV K L ++AP L+ VGVMLPA PL LL + PLV TSGNL Sbjct: 315 LESPAHPIVLVPTSKGAAQPLAHNVAPGLDSVGVMLPAFPLHALLAAD--GPLVCTSGNL 372 Query: 326 SGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR--ESG--EMLRRSRGY---- 377 S +P A + AL L +ADGFL HNR+IV DDSVV + G + +RRSRGY Sbjct: 373 SDEPIAWRDVDALRRLAVLADGFLTHNREIVLPCDDSVVSIGDDGHEQPVRRSRGYAPYP 432 Query: 378 VPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRL 437 +P A +LP + VL +GA+LK+T + +Q LS H+GD+ A Sbjct: 433 IPVAASLPASIRASASVLAVGAELKSTAAWLAADQVTLSSHIGDVGSPETLEALTLATGQ 492 Query: 438 MQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL----HHHAHAAACLAEHQWPLDG 493 ++ ++ + D HP Y SS+WA E + L HHHAH AA +AEH P Sbjct: 493 LEAMHHGRADVIACDLHPEYHSSRWAAERARQSGATLVRVQHHHAHLAALMAEHGLP-GS 551 Query: 494 GDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ 553 ++A T DG G G +G +WGGE L + + L L GGD A +QP R L Sbjct: 552 TPILACTFDGTGWGTDGTVWGGEMLLGDCTGFTRVASLTPFPLAGGDAAVRQPLRGALGL 611 Query: 554 CLRFVPEWQNYSETASVQQQNWSVLAR-----AIERGINAPLASSCGRFFDAVAAALGCA 608 R + + + + + AR +ERGI SS GRF DA A G Sbjct: 612 LHRHGHDVSDNAIAPMLHHTELTSEARRLMIQQLERGIACVETSSMGRFLDACAVLCG-G 670 Query: 609 PATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDL--------------------- 647 PA +SYEG+AA LE LA +P T R +D+ Sbjct: 671 PAKVSYEGQAAILLEVLARQ-----YPGTRMRAGYNIDVHEGPASSVNRDGVHAPRWLMN 725 Query: 648 ------ATFWQQ----------------WLNWQAPVNQRAWAFHDALAQGFAALMREQAT 685 A W W + AP+ AW HDA+A+ + Sbjct: 726 PAPMLQALLWDMQAEVSASRSLNRTQDAWADAIAPI---AWHVHDAVARVVVDIALRVRR 782 Query: 686 MRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAA 739 G + +GGV N+LL A L F +L + +P DGGL+LGQ +IAA Sbjct: 783 DHGTNHIGLTGGVFQNQLLSTLTARALETDGFEVLQHRRVPCNDGGLALGQALIAA 838 >UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D517_LARHH Length = 794 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 302/776 (38%), Positives = 413/776 (53%), Gaps = 59/776 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 Q +RG VQGVGFRPFVWQLA++L + G + N G+GVE+ + P F L++ P Sbjct: 25 QWLLRGLVQGVGFRPFVWQLARRLGIQGQIRNTGEGVEILAQGQPARLAAFERALHEERP 84 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA + R+ +F+I S I PD ATCP CL E+ TP +RR+RY Sbjct: 85 PLAEFELTARQSLPADPALGDFSIGSSQESGHGATIPPDIATCPECLRELFTPADRRHRY 144 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCTHCGPR+TI R +PYDR T MAAF LCP C EY DP RRFHA+P+ACP CGP Sbjct: 145 PFINCTHCGPRYTITRQLPYDRAQTSMAAFGLCPLCQHEYLDPSSRRFHAEPIACPVCGP 204 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + L+MG+ VAIKG+GGFHLAC+AR++ AVA LR KHRP Sbjct: 205 QLRLTDRFAVPLKGDPVTGTLQFLRMGRCVAIKGLGGFHLACNARSAEAVARLRMLKHRP 264 Query: 247 AKPLAVM---LPVADGL----PDAARQLLTTPAAPIVLVDKK-----YVPELCDDIAPDL 294 ++PLAVM L + P+ A LL +P PIVL+ K+ Y+P IAP + Sbjct: 265 SRPLAVMALNLASVETFCHVSPEEA-ALLQSPKRPIVLLQKRAEADQYLP----GIAPGM 319 Query: 295 NEVGVMLPANPLQHLLLQE----------LQCPL----VMTSGNLSGKPPAISNEQALAD 340 N VGVMLP P+ L+ E ++ P VMTS NLSG+P N+ A Sbjct: 320 NTVGVMLPYTPIHWLMFHESLRRPAGLDWMEAPCADVWVMTSANLSGEPIVTDNDDARHR 379 Query: 341 LQGIADGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L +AD FLIHNR + R DDS+ + +LRR+RG+ P LAL + VL + Sbjct: 380 LNTVADAFLIHNRQVAARCDDSLMMMIDHEPHLLRRARGFAPAPLAL---RHDGATVLAV 436 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G KNT L+RG QA++S H+G L A+R ++ + P + D P Sbjct: 437 GGPDKNTVTLLRGTQALVSPHIGGLDHPLTCETHNSAIRHLERWANAEPGCIACDLDPDN 496 Query: 458 VSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALW 513 +SQ A ++ LP + HHA +A LAEH + V+ L +DG G G +G W Sbjct: 497 HASQHAEQLAGLRQLPLLRIQRHHALVSAVLAEHDVDV---PVLGLVMDGGGTGADGNEW 553 Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ 573 GGE LRV+ E L LP + LPGG+ A+++PWR +R + + ++ Sbjct: 554 GGELLRVHGVSMERLAHLPHIPLPGGERASREPWRVAAGWLIRN--GLGDEAARRYGREP 611 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 ++ L+ + + P +SS R+FDA+A+ G + S+ EA LEALA V Sbjct: 612 SFVELSEQVTHQLRCPDSSSSSRWFDAIASLAGLC-SRQSFSSEARLRLEALARP---VA 667 Query: 634 HPVTMPRVDN--QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 R+D+ QLD + L + A +H + A A + A + I Sbjct: 668 PLAGGWRLDDNGQLDWSPVVHHLLTL-TDAEEIASLWHASCAAAVAEWVIRHARQQQIDH 726 Query: 692 LVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 +V +G NR+L+ L +L A TLL + LP+G G LSLGQ + A +WLAG Sbjct: 727 VVLAGSSCSNRVLQQALHRHLLQAGLTLLESRQLPSGAGALSLGQACV-ARQWLAG 781 >UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM Length = 860 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 320/861 (37%), Positives = 422/861 (49%), Gaps = 142/861 (16%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 + + G+VQGVGFRPFV+++A L G V N GV + ++ + F L P Sbjct: 17 KFTVSGQVQGVGFRPFVYRIAADHALTGTVSNTAAGVFIEVQGPAASVDGFGHDLTHKLP 76 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV--PDAATCPACLAEMNTPGERRY 124 PLAR+ S + ++ F I S G +++ D ATC CLA+M+ P RR+ Sbjct: 77 PLARVVSCTHQDIPVAEGEDGFRIVASGDGGAGHEVLISADVATCDDCLADMSDPANRRH 136 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPF NCT+CGPR+TI R +PYDR T MA FPLCPAC EY +PLDRRFHAQP ACP C Sbjct: 137 LYPFTNCTNCGPRYTITRFIPYDRDKTSMACFPLCPACAAEYENPLDRRFHAQPNACPVC 196 Query: 185 GPHLEWVS-------------------------------HGE-HAEQEAALQAAIAQLKM 212 GP + +V HG A+QA L Sbjct: 197 GPRVWYVDGAPDGPAADTGYDAAPGSGRGDEPGCAPASDHGAGRPTGTPAIQALAEALAA 256 Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPA 272 G+I A+KG+GGFHLACDA + AV LR RKHRP KPLA+M+P L A R + +P Sbjct: 257 GRIAAVKGLGGFHLACDAASDAAVGELRRRKHRPHKPLAIMVP---DLAAARRIVHVSPE 313 Query: 273 APIVLVDKKYVPELC------------------------DDIAP---------------- 292 +L ++ LC D AP Sbjct: 314 EEALLAGRERPIVLCRALDGLAGGMHGVARPGDGSPLVLDPDAPRTPPPISPLISPLISP 373 Query: 293 DLNEVGVMLPANPLQHLLLQ-------ELQCP-LVMTSGNLSGKPPAISNEQALADLQGI 344 D VGVMLP PL H+LL+ E + P LVMTSGN G+P + N +AL L I Sbjct: 374 DTPFVGVMLPYTPLHHVLLRLYGALLPEDRVPALVMTSGNAGGEPICLGNREALRRLSSI 433 Query: 345 ADGFLIHNRDIVQRMDDSVVR-----ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 AD FL+H+RDI+ R DDSV R + + LRR+RG+ P + L + P VL +G Sbjct: 434 ADVFLLHDRDILIRTDDSVTRVNPATGAPQFLRRARGFTPRPVFLE---GDGPCVLAMGP 490 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 +LKNT C+ RG++A +SQH+GD+ + RE + I TPQ VV D HP Y++ Sbjct: 491 ELKNTLCVTRGDKAFVSQHIGDMHNLETLGFHREIAAHLPRILQVTPQAVVRDLHPDYMT 550 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 + A + LP T+ HH AH A LAE++ G + L LDG G G++G +WGGE L Sbjct: 551 TAEAEQSGLPVLTLQHHFAHIHAVLAENRH---DGPALGLALDGTGHGDDGTVWGGELLY 607 Query: 520 VNYRECEH--LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-NYSETASVQQQNW- 575 V+ +H LG L + LPGG+ A ++PWR +AQ L W E + + W Sbjct: 608 VDNVALDHQRLGRLARIPLPGGEAAIREPWR--IAQGLL----WHLGLHEPVTDGARPWP 661 Query: 576 ---------SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE--- 623 ++L R +ERG+N PL SSCGR FDAV+A LG T++YEG+AA LE Sbjct: 662 WLRDHAQAAALLPRLLERGVNTPLTSSCGRLFDAVSALLGLC-TTVTYEGQAAIRLEHAQ 720 Query: 624 ALAASCHG-----VTHPVTMPR-----------VDNQLDLATFWQQWLNWQAPVNQRAWA 667 + C G TH P +D W P + A Sbjct: 721 DAVSPCGGSHDAFFTHAYPCPLRGARDGSDTLVLDTHALFRAVHDDWARGTPP-GEVARR 779 Query: 668 FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPA 725 FH + G A + A + + + SGG + N L L LA T+L LP Sbjct: 780 FHAGVVAGLADMAAAVAGVMDVPVVALSGGAMQNLTLSVHLPQALAARGLTVLTHAELPP 839 Query: 726 GDGGLSLGQGVIAAARWLAGE 746 GDG +SLGQ A R LAG Sbjct: 840 GDGCISLGQAAW-ARRELAGR 859 >UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 Tax=Bacteria RepID=Q2JBM2_FRASC Length = 816 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 322/784 (41%), Positives = 413/784 (52%), Gaps = 68/784 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLA 69 ++G VQGVGFRPFV A +L L G V ND GV + P E F +L PPLA Sbjct: 39 VQGLVQGVGFRPFVHAAATELALTGWVRNDTGGVVAEVEGTPGAVEDFARRLRCDVPPLA 98 Query: 70 RIDSVEREPFIWSQLP----TEFTI---RQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 ++ V + ++LP + F I R + GG T PD ATCP CL E+ P +R Sbjct: 99 MVERV-----VTTELPPCGGSGFAIVRSRPAAGG--RTAAAPDVATCPDCLRELADPADR 151 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYR+PFI CT+CGPRFTII +PYDRP T MA F +CP C++EY DP DRRFHAQP+ACP Sbjct: 152 RYRHPFITCTNCGPRFTIITDLPYDRPATTMARFAMCPVCEREYSDPADRRFHAQPIACP 211 Query: 183 ECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP LE+VS G E AL AA L G ++A+KG+GG+HLAC A + AV TLR Sbjct: 212 ACGPRLEFVSPLGAPRTGEDALAAARRLLADGGVLAVKGVGGYHLACVATDPTAVTTLRR 271 Query: 242 RKHRPAKPLAVM---LPVADGLPDAARQ---LLTTPAAPIVLVDKKY--VPELCDDIAPD 293 RK R KP AVM L A L + LLT PA PIVLV ++ P L D +APD Sbjct: 272 RKRRGGKPFAVMVHDLAAARALAHVDEREAALLTDPARPIVLVRRRRDGRPALADSVAPD 331 Query: 294 LNEVGVMLPANPLQHLLL--------------QELQCPLVMTSGNLSGKPPAISNEQALA 339 ++G++LP P+ HLLL PLVMTSGNL G+P A + AL Sbjct: 332 NPDLGLLLPYTPVHHLLLGLPGEPVPLHRTVGTAGWPPLVMTSGNLGGEPIAAEDTDALR 391 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLC 396 L + DG+L H+R I DDSVVR + +RRSRGY P + LP VPP L Sbjct: 392 RLAPLVDGWLRHDRPIRVPCDDSVVRVVDGAPSPVRRSRGYAPLPVPLP---FEVPPTLA 448 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +GADLKNT L G A LS H+GD+ D + A R ++++ TP+ +V DAHPG Sbjct: 449 VGADLKNTCGLGAGRSAWLSGHIGDMDDLATLRAFDAAERHLEHLTGVTPRQLVTDAHPG 508 Query: 457 YVSSQWA--REMNLPTQTVLHHHAHAAACLAEHQWPLDGGD-VIALTLDGIGMGENGALW 513 Y S QWA P +TV HHHAH AA +AEH LDG V+ DG G G + A+W Sbjct: 509 YRSRQWAVRHAAGRPIRTVQHHHAHVAALMAEHG--LDGTRPVVGFAFDGTGYGPDRAVW 566 Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-NYSETASVQQ 572 GGE L +YR L V L GGD A ++P R LA W + Q Sbjct: 567 GGEVLIADYRGFRRFAHLGYVPLAGGDAAVRRPCRMALAHLHAAGVRWDPTLPPVVACPQ 626 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG- 631 VL + G+ SS GR FDAV++ LG + +E +AA LEA A + G Sbjct: 627 PERRVLTHQLASGLGCVPTSSMGRLFDAVSSLLGIR-HEVDFEAQAAIELEARARTAAGG 685 Query: 632 -----VTHPVTM-------PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAAL 679 H + P + + + + L+ V+ A FH A+ L Sbjct: 686 GADDRERHAFALRGQGLGRPLIIDPAPVIRAMVRDLSAGLAVDIAAVRFHTAVVAMIVDL 745 Query: 680 MREQATMRGITTLVFSGGVIHNRLLR--ARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI 737 R G+ + +GGV N +L A A + FT+L +P DGG++LGQ ++ Sbjct: 746 ARRARGEVGLDLVGLTGGVFQNAVLTTAASRALHAGGFTVLRHARVPPNDGGIALGQLLV 805 Query: 738 AAAR 741 AAAR Sbjct: 806 AAAR 809 >UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B2JXA8_BURP8 Length = 791 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 298/775 (38%), Positives = 411/775 (53%), Gaps = 51/775 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++R+ G VQGVGFRPFV+++A L G V ND DGV + + F L P Sbjct: 22 RVRVTGVVQGVGFRPFVYRIATSRALRGWVLNDADGVLIEVEGDAHALADFAAALRSELP 81 Query: 67 PLARIDSVEREPFIWSQLPTE-FTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PLAR+ S++ TE F IR S G+ Q+ D+ C ACL EM P RRY Sbjct: 82 PLARVASLQSHCVAPLLDATERFVIRDSERSGSNLAQLPADSHVCDACLGEMADPANRRY 141 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPRF++I+A+PYDR T M AF +C C+ EYRDP +RR+HAQP ACPEC Sbjct: 142 RYPFINCTNCGPRFSLIKAIPYDRINTTMRAFTMCTRCEAEYRDPSNRRYHAQPNACPEC 201 Query: 185 GPHLEWVSHGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP +E + + AL+AAI L+ G VA+K +GGFHL DARN +AVA LR RK Sbjct: 202 GPRVELYDADRMLSAGDDALRAAIDALRTGLTVAVKSVGGFHLVVDARNPDAVARLRDRK 261 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R +KP A+M+ + + Q L +P PIVL+ K L +++AP + Sbjct: 262 RRNSKPFALMMASVETARRWTDCSELEAQWLRSPGRPIVLLRKLNGVGLAENVAPRNPNL 321 Query: 298 GVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP+ PL +LLL + P LVMTSGN+S P A NE+AL L ++D L+++RDI Sbjct: 322 GVMLPSAPLHYLLLSDPDLPALVMTSGNVSEFPIAYRNEEALVRLFEVSDLVLLNDRDIA 381 Query: 357 QRMDDSVVRESG---------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 R+DDSV+R S RR+RG+ P + + +++ PV+ GA+LK T L Sbjct: 382 IRIDDSVIRCSNHPQLPEPQISFFRRARGFAPYVIEVG---RSMAPVVAYGAELKTTVAL 438 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 E+ +SQH+GDL +D + + ++Y P D HP + S++ A + + Sbjct: 439 ADRERIYVSQHIGDLGNDDTFRSHQTIASHLADLYRVKPTVAACDLHPSFRSTRLASDTH 498 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 + Q V HHHAH A+CLA++ LD G I + LDG G G +G WGGE + R + Sbjct: 499 VSRQQVQHHHAHMASCLADNG--LD-GPAIGVILDGAGYGIDGTTWGGEFFIGDARAVQR 555 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY----SETASVQQQNWSVLARAIE 583 G L ++L GGD A +P R LA L + A++ + V A Sbjct: 556 AGHLRYLSLLGGDKAVHEPVRTALALALESFDGDEGMLACVPALAALGHEARHVYATMWR 615 Query: 584 RGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTM---P 639 +GIN ASS GR FD VAA G C+ A YE E L A +T P P Sbjct: 616 KGINVTRASSMGRLFDGVAALAGVCSRA--EYEAHGPIEFEGLLARDLAMTEPYRYAFDP 673 Query: 640 RVDN--QLDLATFWQQWLNWQAPVNQRAWA---FHDALAQGFAALMREQATMRGITTLVF 694 D +LD +Q ++ A + A FH + A+L + + T+V Sbjct: 674 SADAPIELDYRPLVRQVVSDTAGSVELATISRRFHSTIVLAIASLCDLLRSRHALDTVVL 733 Query: 695 SGGVIHNRLLRARLAHYLAD-----FTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 SGGV N L L + L + F + + +P DGG++LGQ V+A+AR A Sbjct: 734 SGGVFLNEFL---LVNALVELRRRGFDVHAHRDVPTNDGGIALGQAVVASARITA 785 >UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Shewanella RepID=A8FUJ1_SHESH Length = 783 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 288/785 (36%), Positives = 413/785 (52%), Gaps = 79/785 (10%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQ 60 N++ V++ + G VQGVGFRPFV++ A+ L G V N+G GV + ++ + E+F+ + Sbjct: 16 NSAVRVEIIVTGIVQGVGFRPFVYRYAKDEELCGFVLNNGQGVTIEVQGKWRNIESFIAR 75 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTP 119 PPLARID++ +P +F I S G T V PD + C ACL E+N P Sbjct: 76 FDTSPPPLARIDTLSSKPIAIVDDCQDFIIVASDGNTSAVVAVSPDKSCCSACLEEINAP 135 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 R YRYPF NCT+CGPR+T+I+A+PYDR T MA+F +C C+ Y DP+DRR+HAQPV Sbjct: 136 DNRHYRYPFTNCTNCGPRYTLIKALPYDRKHTSMASFAMCSRCEASYLDPMDRRYHAQPV 195 Query: 180 ACPECGPHLEWVSHG----EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 +CP+CGP L +S HA+ AL + +L G+IVAIKG+GGFHL CDA N +A Sbjct: 196 SCPQCGPQLSLLSSDGDIVSHADM--ALTETVQRLLQGEIVAIKGLGGFHLVCDATNHDA 253 Query: 236 VATLRARKHRPAKPLAVM---LPVADGLPDAAR---QLLTTPAAPIVLVDKKY--VPELC 287 V LR RK RP KPLAVM L +A + ++ LT+ PI ++ K L Sbjct: 254 VQRLRERKRRPGKPLAVMVSSLEMAKSIVTGSQFEWDQLTSIERPITIMTKNRSNTVNLS 313 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 IAP ++++GV LP PL LLL+EL P+V TS N SG+P ++ +A L + D Sbjct: 314 PAIAPGIDKLGVFLPYTPLHSLLLKELDIPIVATSANRSGEPIICDGKEIIAQLSEVVDS 373 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L HNR I+ DDSV++ G+ +LR +RG+ P ++ P G + L +GA KN+ Sbjct: 374 ILDHNRPIINACDDSVIQCIGDEVQVLRLARGFAPLSIRNPTG--SASHQLAVGAQQKNS 431 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 ++ VLS H+GDL + + L + +Y F+P+ V+ D HP Y S+WA+ Sbjct: 432 IAFGFADKMVLSPHIGDLFSLEAESYFEHTLATFKRLYQFSPKTVIRDKHPDYAPSKWAQ 491 Query: 465 ---EMN--LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 E+N + + HHHAH + +A +Q V+ + DG G+G++ +LWGGE L Sbjct: 492 RFIELNEGVKQLEIQHHHAHILSVMAVNQVK---DKVLGFSFDGTGLGDDQSLWGGEALI 548 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS--ETASVQ------ 571 + E + + L GG+ A K P R LLA +Q YS E ++ Sbjct: 549 ADVNGFERVCHIKPFMLIGGEQAIKDPKRLLLAIL------FQQYSLEELGALSLPILTK 602 Query: 572 ---------QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + W +R IE SS GR FDAVA LG +EG+A L Sbjct: 603 TDPRLIENLHKIWQSKSRCIE-------TSSIGRIFDAVAVLLGLIEKN-QFEGQAGMLL 654 Query: 623 EALAASC--HGVTHPV--TMPRVDNQLDLATFWQQWLN---WQAPVNQRAWA----FHDA 671 EA A H T ++P +D L T ++Q ++ + QR A F ++ Sbjct: 655 EAAANRFDDHIATEEFCYSLPVIDGMWHLDTLFKQLVSSVTQETLTEQRVCAIARGFMNS 714 Query: 672 LAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGG 729 L A L ++ + + +V SGGV NR L L + L P +P DGG Sbjct: 715 LGDAVAKLAKQHSPL----PVVLSGGVFQNRYLSELCITKLNEQGSKRLMPHHVPINDGG 770 Query: 730 LSLGQ 734 ++LGQ Sbjct: 771 IALGQ 775 >UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDY6_9ACTO Length = 764 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 302/767 (39%), Positives = 400/767 (52%), Gaps = 52/767 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 V++ + G VQGVGFRPFV++LA + L+G V N G V + R F+ +L Sbjct: 12 VRVTVSGLVQGVGFRPFVYRLANEHRLNGHVANTGGQVAITARGPAAALAEFIARLSTEA 71 Query: 66 PPLARIDSVEREPFIWSQLP-TEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 P + +++V + P F I S G PD ATC AC E+ P +RR Sbjct: 72 PVQSHVENVAVADLEPTPGPGAGFRIVNSARSGDPRRYPPPDLATCAACARELFDPDDRR 131 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT CGPR +II +PYDR T M F +C C EY DP DRRFHA+P+AC + Sbjct: 132 YRYPFINCTACGPRISIIDDLPYDRARTTMRTFHMCDRCRGEYLDPGDRRFHAEPIACAD 191 Query: 184 CGPHLEW----VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGP L W + HG EAAL AIA L+ G ++A+KG+GG+ L DA + AV L Sbjct: 192 CGPRLTWWGDGIGHG-----EAALSQAIAVLETGGLIAMKGVGGYQLVTDAGDDTAVRRL 246 Query: 240 RARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R K+RP KPLAVM+ D L +LLT PAAPIV+ ++ L +AP Sbjct: 247 RHVKNRPGKPLAVMVGTLDRARRLADLDTDEAKLLTAPAAPIVVCHSPHLETLSSLVAPR 306 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L+ VGV LP +PL HLLL L PLV+TSGNL G+P I +E A L + DG L H+R Sbjct: 307 LSHVGVFLPYSPLHHLLLAALDRPLVVTSGNLGGEPIIIGDEAARDRLGPMVDGVLGHDR 366 Query: 354 DIVQRMDDSVVR-ESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I +R DDSVVR GE LRR+RGY P LP +L GA K+ + Sbjct: 367 PIRERHDDSVVRVVDGETLTLRRARGYAPSPSRLP--IPTDRTILAAGAQSKSALAVTGD 424 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 ++ +L +LGDL + + + ++ P + HD H GY S+++AR+ L Sbjct: 425 DRVILGPYLGDLDSAEAMDGYATGVDRLCGMHAVQPNLIAHDLHDGYASTRFARDSGLDR 484 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGD--VIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HHHAH A AE G D I + DG+GMG++G LWGGE + +YR+ L Sbjct: 485 VGVQHHHAHVVATAAER-----GVDEPFIGVAYDGLGMGDDGTLWGGEIMLADYRDFRRL 539 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE------WQNYSETASVQQQNWSVLARAI 582 G LPGG A + P R +A R+ E ++ + + R I Sbjct: 540 GRFGYAPLPGGAAAIRNPAR--MALGYRYGAEDLGGGTFRAPELEKRLGPAQTDTIRRMI 597 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP-RV 641 ERG+N P ASS GR FDAVAA LG T SYEGEAA LE A+C GV +P R+ Sbjct: 598 ERGVNCPKASSAGRLFDAVAALLGITD-TSSYEGEAAVLLE---AACEGVADAFPLPWRL 653 Query: 642 DNQLDLATF-----WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + +A + + + A FH + + AL+R+ A T+ G Sbjct: 654 ARRDGIAVYDPIPTLRAITETDEATSLTAARFHTTIVEVTVALVRDAARHGYPKTVCLGG 713 Query: 697 GVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GV NR L + L FT+ + +P DGG++ GQ VIAAAR Sbjct: 714 GVFQNRRLVRGVREALGQEGFTVHISRDIPVNDGGIAYGQAVIAAAR 760 >UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQ64_OPITP Length = 788 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 315/765 (41%), Positives = 415/765 (54%), Gaps = 50/765 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPP 67 L I G VQG+GFRPFV +LA++L + G V N+ G +R+ P+ FL++L P Sbjct: 29 LEITGTVQGIGFRPFVARLAKELRIRGWVRNNPRGAALRIAGAPDRLDEFLLRLRAELPA 88 Query: 68 LARIDSVEREPF-IWSQLP----TEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGE 121 +IDS+E+ P + + LP F I S T + + PD A C CLAE+ +P + Sbjct: 89 AGKIDSLEQPPAGVRADLPPCPAAGFEIIASATTEPPTSAVTPDLAICADCLAELGSPRD 148 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPFINCTHCGPR+TI+RA+PYDRP T MA F +C C +EY DP +RR HAQP AC Sbjct: 149 RRHGYPFINCTHCGPRYTILRALPYDRPNTTMAEFVMCHDCAREYGDPRNRRHHAQPNAC 208 Query: 182 PECGPH--LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGPH LE + AE++ A+ AA A L G IVA+KGIGGFHL D N AVA L Sbjct: 209 SVCGPHVTLEDPPGKKLAERDEAIAAAAASLLHGNIVAVKGIGGFHLLADGTNETAVAEL 268 Query: 240 RARKHRPAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 R RKHR KPLAVM P + + RQ LT+ AAPIVLV ++ L IAP Sbjct: 269 RRRKHREEKPLAVMFPSLAAVREMAELSEEEERQ-LTSAAAPIVLVRRRPGAALAVSIAP 327 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 VG LP PL LLL PLV TSGNL+ +P N +A L IAD FL HN Sbjct: 328 GNPCVGAFLPYTPLHKLLLDACARPLVATSGNLAEEPLCTGNVEARERLGRIADLFLTHN 387 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I + +DDSV+R + + +LRR+RG+ P L LP + PP+LC+G +LK+T + Sbjct: 388 RAIARPIDDSVIRVARDGPVLLRRARGFAPTPLPLPADCRCRPPLLCVGGELKSTIAVTT 447 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 VLS H+GDL + +R + L +++++ T + V DAHP Y S+ +A + LP Sbjct: 448 DTNLVLSPHIGDLESPLARAAFRHTIDLFRSLHELTFRAVGCDAHPDYASTIFAESLGLP 507 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGG--DVIALTLDGIGMGENGALWGGECLRVNYR--EC 525 V HH AH ACL EH GG V+ + DG G G +G +WGGE + V+ R Sbjct: 508 VVRVQHHLAHLLACLLEH----GGGPERVLGVAWDGTGYGSDGTIWGGEFIVVDRRAHTA 563 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 +G L LPGG+ A + PWR L P+ T + V A ++ G Sbjct: 564 RRVGHLRPFRLPGGEAAIRAPWRTALGLLHALSPDASTALNTLPNTPEAQQVRA-LLDGG 622 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH----GVTHPVTMPRV 641 +AP+ +S GR FD VAA LG +++EG+AA +EA+A G P+ Sbjct: 623 RHAPITTSAGRLFDGVAAMLGLR-QQVTFEGQAAMDVEAIATDAEPNITGWPMPIGTSEQ 681 Query: 642 DNQLDLATFWQQWLN------WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 +L+L W+ L PV A FH LA G AAL A GI +V S Sbjct: 682 TGRLELD--WRPALAALTRELAHTPVPTLAARFHATLAAGIAAL----AERVGIEDVVLS 735 Query: 696 GGVIHN-RLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIA 738 GG N RLL A A F +L + LP DGG++ GQ + A Sbjct: 736 GGCFQNVRLLELTTAALQAKGFRVLRHRMLPPNDGGIAAGQALGA 780 >UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein HypF n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000187434E Length = 802 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 304/790 (38%), Positives = 410/790 (51%), Gaps = 65/790 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 ++ RI G VQGVGFRPFV +A++ L G ND GV + + + F QL+ Sbjct: 18 IRWRIEGIVQGVGFRPFVATIARRAGLVGFCGNDEQGVFIEVEGTSDALAAFCSQLFTEL 77 Query: 66 PPLARIDSVEREPFIWSQLPTEFTI---RQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 P LARI + EP EFTI R S G + PD A CP C E P Sbjct: 78 PALARIINHSAEPVAVLGHEHEFTIVPSRHSYSG--RALLPPDTALCPDCRREFFDPTNP 135 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFI+CT+CGPR +II +PYDRP T MAAFP+C C++EY DP DRR+HAQP++C Sbjct: 136 RYLYPFISCTNCGPRLSIITELPYDRPRTTMAAFPMCTPCEREYTDPTDRRYHAQPISCF 195 Query: 183 ECGPHLEWVSHGE------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +CGP L W G+ E A + A A L G ++A+KGIGGFHL CDA N A Sbjct: 196 DCGPRLSWHDAGDTTTATSREEVLALFRRAHALLDDGALLAVKGIGGFHLVCDATNDAAC 255 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR RK RP KPLAVM P D L + ++ L +P APIV+ K+ L + I Sbjct: 256 EKLRLRKRRPDKPLAVMAPTVDTAAQLVELTEQEKRFLDSPEAPIVIAPKQRSGPLSNLI 315 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP L+ G+MLP + + HLLL + PLV+TSGNLSG+P N AL L IAD F++ Sbjct: 316 APGLDSFGIMLPYSGI-HLLLCDR--PLVVTSGNLSGEPVCTDNADALKKLGHIADAFIL 372 Query: 351 HNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALP-----------------PGFK---- 389 H+R+I ++DSV + RRSRG+ P +++ PG Sbjct: 373 HDREIHVPVEDSVFIGTAPS-RRSRGFAPIPVSITATDSRSHTSTGPGSATGPGISVRCT 431 Query: 390 NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYV 449 + P + G +LKNTF + G+ A +S H+GD+ Q ++ A+ + ++ D TP+ V Sbjct: 432 SQPTIFATGGELKNTFAIAHGDLAHVSAHIGDMGSWASQKAYQRAVDQLLSMRDATPELV 491 Query: 450 VHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGD-VIALTLDGI 504 V D HPGY ++ ++A E ++ V HH AHA + LAEH+ D + TLDG Sbjct: 492 VCDLHPGYATTAFAERFAAEHDIELLAVQHHFAHALSLLAEHRLLSPNADRAVVATLDGT 551 Query: 505 GMGENGALWGGECLRVNYREC--EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G G +G++WGGE L ++ E P L GGD A PWR LA L E Sbjct: 552 GYGTDGSIWGGEILTLSRSSANWERTWHCPTFPLVGGDRAVTHPWR--LALGLTHAWELD 609 Query: 563 NYSETASVQQQNWSVLARA-IERGINAPLASSCGRFFDAVAAAL---GCAPATLSYEGEA 618 + ++ + L ++ + G+ SS GR FDA AA L +SYE +A Sbjct: 610 DDHLLRNLSNEREVALVKSQLATGVGTVQTSSLGRIFDAAAALLLPRWRGGGAISYEAQA 669 Query: 619 ACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP--VNQRAWAFHDALAQGF 676 A LEA AA+ + +H + V ++ + A V Q A+ FH +A Sbjct: 670 AMELEA-AATRYVRSHAEALGAVSSETKSEHLQEVIREAVASPDVEQAAFVFHSGVAGLV 728 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 + + A G + SGG +N LL L H +A FTLL Q +P GDGGLSLGQ Sbjct: 729 GKRLVQAAEKSGTDVVGVSGGCANNALLMELLRHEVATEGFTLLQHQIVPPGDGGLSLGQ 788 Query: 735 GVIAAARWLA 744 V A R LA Sbjct: 789 AV--AGRLLA 796 >UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clostridium acetobutylicum RepID=Q97KV6_CLOAB Length = 762 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 267/760 (35%), Positives = 398/760 (52%), Gaps = 47/760 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPP 67 L+I G VQGVGFRPFV++ A L L G V N+ GV + + + F+ +L P Sbjct: 7 LKIEGIVQGVGFRPFVYRQASLLGLKGWVSNNSAGVYIDVEGESSNLYEFIDKLKYDKPF 66 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRY 126 L RI+++ E + F I++S T ++ PD C C+ ++ P +RY+Y Sbjct: 67 LCRIENIAIEEKTAVNYRS-FKIKRSEDKYNKTTLISPDIGICEKCIEDITNPSSKRYKY 125 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF +CT+CGPRF+I++A+PYDR T M F LC ACDKEY D +RRF+A+ +C CGP Sbjct: 126 PFASCTNCGPRFSILKAIPYDRKNTTMNKFKLCSACDKEYNDYNNRRFYAETNSCKICGP 185 Query: 187 HLEWVS--HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 H+ W+ +G E + L +LK GKI AIKG+GGF L CDA N A+ LR +K+ Sbjct: 186 HI-WIENHNGVKIEVDDELNWTRKKLKEGKIFAIKGLGGFQLVCDAENEEAIKKLRQKKN 244 Query: 245 RPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 R KP AVM+ + + +LL + PIV++++ ++ IAP +G Sbjct: 245 RQHKPFAVMVKDIETAKKYCSVNYKEEKLLKSKVKPIVILNRSNYNKIPKVIAPYQKTLG 304 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 VMLP PL +LL + L+MTS N G P NE A+ L IAD FL HNRDI Sbjct: 305 VMLPYTPLHYLLFSDDIEVLIMTSANAHGLPLEYKNESAIDKLGNIADYFLQHNRDINVP 364 Query: 359 MDDSVVR-ESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DDS+VR +G+ ++RR+RGY P+ P NV +L G+++KNTFC+ + L Sbjct: 365 IDDSIVRVVNGQECVIRRARGYTPN----PIKSDNVREILACGSNMKNTFCIAKNNFMFL 420 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLH 475 SQ+ GDL + ++ +R + I+ FTP Y+ D HP Y+S + LP V H Sbjct: 421 SQYNGDLENVETIDRYINNIRHFEKIFKFTPGYIACDMHPNYLSIIYDNYSKLPKIEVQH 480 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH +CL E++ G VI + DG G G + +WGGE + ++ L L V Sbjct: 481 HHAHIVSCLTENKVK---GKVIGIAYDGTGYGTDKKVWGGEFFICDTKKFIRLAHLKYVK 537 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ------QNWSVLARAIERGINAP 589 +PG ++A ++ WR +A + V E Y+E ++ + L I+ IN P Sbjct: 538 MPGAEMAIRENWRMAVAY-IYSVFESGKYNEKHLLKTIMKLYGEKAIKLIDIIKANINCP 596 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEA-LAASCHGVTHPVTMPRVDNQLD-- 646 SS GR FDA A+ +G ++YEG+AA LEA + C + DN + Sbjct: 597 ETSSMGRLFDAAASLIGVRD-NITYEGQAASELEAVIELKCKQYYEYDIRFKDDNYIIEG 655 Query: 647 ---LATFWQQWLNWQAPVNQRAWAFHDAL---AQGFAALMREQATMRGITTLVFSGGVIH 700 + Q ++ + + + FH+ + ++ L+R++ I + SGGV Sbjct: 656 DKVIKGIIQDKISG-VTMGEMSSKFHNTVVEFSKDVCKLLRKKT---AINQVALSGGVFQ 711 Query: 701 NRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 N L L L F + + +P DGG++LGQ ++A Sbjct: 712 NSYLLKNLVDSLKKEAFIVYTNKEIPTNDGGIALGQIIVA 751 >UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Frankia sp. EuI1c RepID=D1VJK4_9ACTO Length = 807 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 301/815 (36%), Positives = 413/815 (50%), Gaps = 100/815 (12%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLARI 71 G +G PFV+ LA + +L G+V N GV + + F++ L PPLA + Sbjct: 4 GSCRGWVSAPFVYALASREHLVGEVANSPAGVHIEASGSAAALDAFVIALRDEAPPLAVV 63 Query: 72 DSV-----------------------EREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAA 107 + V R P + F I S G +T + D A Sbjct: 64 EDVVVRRRPPPDGRRASGPGGADGGGTRAPRPGAPTAAGFRITASDPAGERSTLVSADCA 123 Query: 108 TCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYR 167 TC CLAE+ P +RRYRYPFINCT+CGPRFTIIR +PYDRP T MA F +CPAC EY Sbjct: 124 TCADCLAELADPADRRYRYPFINCTNCGPRFTIIRDVPYDRPATTMAGFAMCPACAAEYH 183 Query: 168 DPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 DP +RRFHAQPV CPECGP L + ++ + L+ G ++A+KG+GG+HLA Sbjct: 184 DPGNRRFHAQPVCCPECGPRLRLLDRAGRPLDADPIERSAELLRAGAVLAMKGLGGYHLA 243 Query: 228 CDARNSNAVATLRARKHRPAKPLAVMLPVAD--------GLPDAARQLLTTPAAPIVLVD 279 DAR+ A A LR RKHR KP AVM V+D + A +LLT PIVL+D Sbjct: 244 VDARSDAAAARLRGRKHRADKPFAVM--VSDVAAARELCAVGPVAERLLTGRRRPIVLLD 301 Query: 280 -KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQAL 338 P + +AP ++G+M P P HLLL PLV+TSGN+S +P +++A Sbjct: 302 LLPGGPGVARSVAPGTRQLGLMTPYTPAHHLLLAAFSGPLVLTSGNVSDEPIVYRDDEAF 361 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVR--------------------------------- 365 L IAD FL+H+R I R DDSVVR Sbjct: 362 GRLGPIADYFLVHDRPIHVRADDSVVRVLPSWPGEPRRERPPAGEPSRRPTNKPGSPAAG 421 Query: 366 ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDD 425 E +++RR+RGY P+ LA+ G++ PVL GA+LK+TFCL RG A +SQH+GDL + Sbjct: 422 EREQLVRRARGYAPEPLAM--GWETPRPVLACGAELKSTFCLTRGRYAFVSQHIGDLENY 479 Query: 426 GIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAA 481 + + + ++D P+ + HD HP Y+S+++ A + L V HHHAH A Sbjct: 480 ETFRAFTAGVAHYERLFDVRPEVIAHDLHPEYLSTKYALDRAEDDGLGVVGVQHHHAHIA 539 Query: 482 ACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDL 541 +CLA+++ G V+ L DG+G G +G LWGGE L + L L VA+PGG Sbjct: 540 SCLADNR---HSGPVLGLAFDGLGYGTDGTLWGGEVLLADLTRFTRLAHLDPVAMPGGAA 596 Query: 542 AAKQPWRNLLAQCLRFVPEWQNYSETASVQQQN---WSVLARAIERGINAPLASSCGRFF 598 A + PWR A ++ + +V+++N W + +RG+ APL SS GR F Sbjct: 597 AIRSPWRMAAA----YLSAAGVDTAGLAVRERNAAHWESVVAMADRGVAAPLTSSAGRLF 652 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV------TMPRVD----NQLDLA 648 DAVAA L T++YEG+AA LE LA ++P+ P VD DL Sbjct: 653 DAVAAILDVRD-TVNYEGQAAIELEQLADQAERESYPLPGIVRPPRPAVDPGRIQGTDLV 711 Query: 649 TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 + L + A FH LA+ + A G+ SGGV N+ L + Sbjct: 712 AAVVEDLRAGTDRARVAARFHATLARTIVTVCECLAEQTGVRAAALSGGVFANQRLLNEV 771 Query: 709 AHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L A T+L +P DGG+SLGQ +A+A+ Sbjct: 772 GAGLRAAGLTVLTHSRVPTNDGGISLGQAAVASAQ 806 >UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C4206D Length = 815 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 276/811 (34%), Positives = 418/811 (51%), Gaps = 81/811 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 +++ + G VQGVGFRPFV+++A +L L G V N G+ VE+ L+ F+ +L Sbjct: 3 SIKVLVEGIVQGVGFRPFVYRIATELELVGYVRNLGNVVEIILQGTDNQLADFIYKLQNE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 PP+A+I+++ E T+FTI++S+ T ++P D A C CL E+N P RR Sbjct: 63 LPPIAKINNLRTEDIEIDSPYTDFTIKESSDSFSGTSVIPPDLAICDKCLEEINDPQNRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y+YPF CT CGPRFT+I +PYDR T M FPLC C+ EY++PLDRR+HA+ C Sbjct: 123 YKYPFNACTDCGPRFTVIENVPYDRDKTTMDDFPLCDECEIEYKNPLDRRYHAEASCCEV 182 Query: 184 CGPHLEWVSH---------GEHAEQEAALQAAIAQ------------LKMGKIVAIKGIG 222 CGP L+ + + E E +A + AI L GKI AIKGIG Sbjct: 183 CGPSLKLMKNETEEGISTDKEGNEIKAMKRTAIDTESNDPLKDTARLLDEGKIFAIKGIG 242 Query: 223 GFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIV 276 G HL + ++ AV+TLR R R + AVM P + + D + L + PIV Sbjct: 243 GTHLVANVKDEKAVSTLRERLGRKNQAFAVMSPDIETVRTFAIVSDEEEKTLLSKERPIV 302 Query: 277 LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNE 335 ++ K + + ++P L+ +GVMLP PL HLL E P +MTS N+ G+P I+NE Sbjct: 303 ILKKSKDYDFAESVSPRLHNIGVMLPYAPLHHLLFNETDSPAYIMTSANVPGEPMMITNE 362 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSVVR-ESGEM--LRRSRGYVPDALALPPGFKNVP 392 + L +L IAD +LIHNR I+ R DDSV R + E+ +RRSRGY P+ L + ++ Sbjct: 363 EILQNLDEIADYYLIHNRRILNRCDDSVARFRNNELAFIRRSRGYTPEPYDLKGKYTDIN 422 Query: 393 P------VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 P +L LG +L TF +++ +A +SQH+G+ + +EA++ M I T Sbjct: 423 PDFDNLNILALGPELDVTFTILKNSKAYVSQHIGNTNKYRTYEFLQEAIKHMMRITK-TD 481 Query: 447 QY--VVHDAHPGYVSSQWARE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 + + D HP + +++ A+E + P V HHHAH + L +H D ++I + Sbjct: 482 SFDAIACDLHPQFFTTRLAKEYAEKYDCPLIPVQHHHAHGISLLNDHYDDNDLNEMIIIA 541 Query: 501 LDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL----- 555 DG+G G +G WGGE L + + E + L +PGGDL K P R ++A L Sbjct: 542 ADGVGYGADGNSWGGEILYTDIKGFERMASLMPQKMPGGDLCTKYPAR-MMASILSNPES 600 Query: 556 -----RFVPEW------QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 ++ E+ NY ++ L R +E +N + +S GR D+V+ A Sbjct: 601 DYENEKYTKEYIEELLNNNYLDSFKHGSVEIKSLFRQMETNLNVGINTSTGRVLDSVSTA 660 Query: 605 LGCAPATLSYEGEAACALEALAASCHGV----THPVTMPRVDNQ------LDLATFWQQW 654 L SYEGEA+ LE+ A G P+ + +++ LD + Sbjct: 661 LHICDER-SYEGEASMKLESYAFEYKGEGSLDDFPIIVKEYEDENGKRLILDTTAILRYI 719 Query: 655 LNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 ++ +++ A A A++ G A L E A +GITT+ +GGV +N + + Y Sbjct: 720 IDKIEEGEDLHKIAAAGQKAVSIGLAKLAIESAKEKGITTIGATGGVFYNEAITDYIKTY 779 Query: 712 LADFTLLFPQSLPA--GDGGLSLGQGVIAAA 740 + F Q + + GDG +SLGQ ++A Sbjct: 780 IEKEGFDFIQHINSCPGDGSVSLGQAIVAGT 810 >UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H2J5_STRCL Length = 771 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 301/771 (39%), Positives = 413/771 (53%), Gaps = 54/771 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPP 67 + + G VQGVGFRP V++LA Q L G V ND GV + + RE + F L + P Sbjct: 12 VEVTGFVQGVGFRPHVYRLATQHLLGGWVRNDARGVTICVEGPREAADLFGEALLKRLPG 71 Query: 68 LARIDS---VEREPFI-WSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGER 122 LAR+D+ V EP W+ + FT+R ST + + PD+ C C E+ P +R Sbjct: 72 LARVDTCAVVAEEPVRDWT---SSFTVRHSTAESGAGALVTPDSHVCADCARELFDPADR 128 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+RYP +NCT CGPR++IIR +PYDRP T MA F +CP C EY P DRRFHAQP AC Sbjct: 129 RHRYPLLNCTDCGPRYSIIRGLPYDRPKTTMADFAMCPECRAEYESPADRRFHAQPTACW 188 Query: 183 ECGPHLE-WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + + G A + A L+ G I+A+K +GG+ L D R+ A A LRA Sbjct: 189 SCGPQVRLLLPDGSDAGTADPVATAAGLLRDGHILAVKALGGYQLMADPRSPAATAELRA 248 Query: 242 RKHRPAKPLAVMLPVADG--------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 RK R +KP A++ V D L D R+LL +P PIVL+ + L +AP Sbjct: 249 RKERSSKPFALL--VRDSATAAEYTVLDDRERRLLESPGRPIVLLRARPDSSLAPGVAPG 306 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 +G+MLPA PLQHLLL L+ TS N +P A + E+AL L+G+AD FL+H+R Sbjct: 307 SATLGLMLPATPLQHLLLAAAGPVLIATSANAPDEPMARTEEEALRGLRGLADAFLVHDR 366 Query: 354 DIVQRMDDSVVR-------ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 +I R+DDS+ R +RR+RGYVPD + VPPVL LGA+LKNT C Sbjct: 367 EIHMRVDDSIARVVHSTVEPKVTFVRRARGYVPDPVPA---PFPVPPVLALGAELKNTVC 423 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE- 465 L G+ +SQH+GDL G Q + + + +++++ TP+YV HD HP + S+++A Sbjct: 424 LGSGDNLYVSQHIGDLKSLGNQRFFADTIAHLRSVFGVTPRYVAHDLHPDFHSTRYAASC 483 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGD--VIALTLDGIGMGENGALWGGECLRVNYR 523 ++ V HHHAH A+C+A+ +G D VI + DG G G +G +WGGE L +YR Sbjct: 484 QDVRLVGVQHHHAHMASCMAD-----NGLDRPVIGVVFDGTGYGTDGTIWGGEFLIGDYR 538 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 E L LPGGD A ++P R LLAQ VL + Sbjct: 539 GFERKAHLARFRLPGGDKAVREPDRVAIGLLAQHFGADAATLPLDLLRRRDPFEVGVLMK 598 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH--PVTM 638 RG+NAP SS GR FDA +A LG + YEG+AA LE L A H PV + Sbjct: 599 MATRGVNAPETSSMGRLFDACSALLGVC-GRVGYEGQAAIELEQLIAWDHTPVEPWPVRL 657 Query: 639 PRVDNQLDLATF-WQQWL--NWQAPVNQRA---WAFHDALAQGFAALMREQATMRGITTL 692 D++L + W + + + P A FH+++ + + + G+T Sbjct: 658 REEDDRLVIDHGPWLEGMVSDLSGPGGSAARVSRTFHESVVRAVVEVCLRLSHSSGVTDT 717 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 V SGGV N+ L R+ L A + +P DGGLS+GQ ++AAAR Sbjct: 718 VLSGGVFLNQHLLVRVEEELTRAGLGVYTHSRIPTNDGGLSVGQAMVAAAR 768 >UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4U0_DESDA Length = 978 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 319/885 (36%), Positives = 428/885 (48%), Gaps = 171/885 (19%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLARI 71 G+VQGVGFRPFV++LA + L G V N DGV + ++ E+ E F ++L + PPLAR+ Sbjct: 86 GQVQGVGFRPFVYRLAHEGGLTGTVGNTSDGVRMEVQGMPEEVERFGMRLQKELPPLARL 145 Query: 72 DSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRYPFIN 130 ++ E F I S G ++ +V PD C CL++M P R+ Y F N Sbjct: 146 TALRHEDMAAVPGEAAFAIVASDGHAGHSVLVSPDVGICADCLSDMTDPENPRHNYAFTN 205 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW 190 CT+CGPR+TI R++PYDR T M+ FPLCP C EY DP DRRFHAQP+ACP+CGP L + Sbjct: 206 CTNCGPRYTITRSIPYDRAVTSMSCFPLCPRCAAEYGDPADRRFHAQPIACPDCGPRLWF 265 Query: 191 VSHG---------EHAEQEAALQAAIAQ-------------------------------- 209 V EH + L A A Sbjct: 266 VDRAAAVAGRTGVEHFRADCGLAGAEADSGPDVDNADAHDRADAARQRCLPGAETAAREA 325 Query: 210 -------LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM---LPVADG 259 L G I+A KG+GGF LACDARN A+A LR RK+RP KPLA+M L Sbjct: 326 IRRAGRVLLDGGILAFKGLGGFQLACDARNERALALLRERKNRPHKPLALMADCLETVRA 385 Query: 260 LPDAARQ---LLTTPAAPIVL----------------------------VDKKYVPELCD 288 D + + LLT+P PIVL D PEL Sbjct: 386 FCDLSPEHEALLTSPEKPIVLCPLRTGKARGPYATNGVDGLNGPAGKADADTPGRPELPF 445 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQC------PLVMTSGNLSGKPPAISNEQALADLQ 342 +APD +VGVMLP PL +L LQ LVMTS N G+P + N +A+A L Sbjct: 446 LVAPDAGQVGVMLPNTPLHSVLFAWLQVHAPLPPVLVMTSANAGGEPICLGNREAIARLA 505 Query: 343 GIADGFLIHNRDIVQRMDDSV---------VRESGE-------MLRRSRGYVPDALALP- 385 G+AD +L+H+RDI+ R+DDSV V ESG RR+RGYVP + L Sbjct: 506 GLADAWLLHDRDILVRVDDSVISLRPRADVVDESGPPHRAAPFFYRRARGYVPRPVFLAD 565 Query: 386 ------------PGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWRE 433 G + V GA+LK T CL RG +A + QH+GDL + + E Sbjct: 566 DGEKAGGRQPCASGRSDAACVFGAGAELKATICLTRGNEAFVGQHIGDLENPATLAFYEE 625 Query: 434 ALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQW 489 M+ + + P +V D HP ++S+++A ++P + HH AHAA+ LAE+ Sbjct: 626 VAAHMEKLLEVRPSALVCDLHPDFLSTRYAEARAARDSIPLWRLQHHAAHAASVLAENAC 685 Query: 490 PLDGGDVIALTLDGIGMGENGALWGGECL--RVNYRECEHLGGLPAVALPGGDLAAKQPW 547 G +AL LDG G+G++G +WGGE L +++ E + +G L A ALPGGD A ++PW Sbjct: 686 ---FGPALALCLDGTGLGDDGTIWGGELLLMQLDTPEWQRVGCLSAFALPGGDAAVREPW 742 Query: 548 RNLLA---------QCLRFVPE-WQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 R +A CL PE + + A + + R IN P SSCGR Sbjct: 743 RIAMALGRQAADAGHCL---PEDIEAAAPWADGHAAAARAVEEMLVRQINCPATSSCGRL 799 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-------------- 643 FDAV+A LG ++YEG+AA LE A G RV++ Sbjct: 800 FDAVSARLGLC-LCITYEGQAAIRLEDAALRAGGALGGAMTGRVEDLRRVAELVWPVGMA 858 Query: 644 ------QLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 LD A + + + P A FH +LA FA++ A RG+ Sbjct: 859 LRDGLLTLDSAGLYARVVQAALGGMPAEDIAARFHLSLAAAFASMTGRAARKRGVGVAAL 918 Query: 695 SGGVIHNRLLRARLAHYLAD---FTLLFPQSLPAGDGGLSLGQGV 736 SGGV+ N ++ ARL +L + +L LP GDGGLSLGQ V Sbjct: 919 SGGVMQNGIM-ARLLPFLLERQGLKVLCHHELPPGDGGLSLGQAV 962 >UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUH9_9DELT Length = 845 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 331/833 (39%), Positives = 440/833 (52%), Gaps = 108/833 (12%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPPLARI 71 G+VQGVGFRPF+++LA + L G V N DGV + ++ PE F V+L + PPLAR+ Sbjct: 13 GQVQGVGFRPFIYRLAVEGGLSGSVGNTSDGVRIEVQGPPEQVDAFAVRLRRELPPLARL 72 Query: 72 DSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRYPFIN 130 +E TEF I S G ++ +V PD C CL +M+TPG R+ Y F N Sbjct: 73 TRLEVTDLPTVDGETEFVIVASHGHAGHSVLVSPDVGICEDCLRDMHTPGNPRFGYAFTN 132 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW 190 CT+CGPR+TI R++PYDR T MA FP CP C+ EYRDPLDRRFHAQPVACP+CGPHL Sbjct: 133 CTNCGPRYTITRSIPYDRATTSMACFPFCPRCEAEYRDPLDRRFHAQPVACPQCGPHLWL 192 Query: 191 VSH--------------------GEHAEQEAALQ----AAIAQLKMGKIVAIKGIGGFHL 226 V + E EA+++ A A L+ +++A+KG+GGF L Sbjct: 193 VDNPLLPPGGTLPPDSAPAGWPGPETLPSEASMRDAVARAAALLRDDRLLALKGLGGFQL 252 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLP-------VADGLPDAARQLLTTPAAPIVLVD 279 ACDAR++ +V+ LR RK RP KPLA+M+P + D LP LL P PIVL Sbjct: 253 ACDARSARSVSLLRLRKRRPHKPLALMVPDLATARELCD-LPPEHEALLLCPEKPIVLCP 311 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL---------QCP-LVMTSGNLSGKP 329 + L IAPD +G+MLP PL +L EL P LVMTS N SG+P Sbjct: 312 ARKG-CLPPSIAPDTAAIGIMLPYTPLHAVLFDELVRLTAAAGEPAPVLVMTSANASGEP 370 Query: 330 PAISNEQALADLQGIADGFLIHNRDIVQRMDDSV-----VRESGE-------MLRRSRGY 377 + N +AL L +AD +L+H+RDI+ R+DDSV + GE RR+RGY Sbjct: 371 ICLGNREALRRLAHLADAWLLHDRDILVRVDDSVAGVRPLPADGEQPAATPFFYRRARGY 430 Query: 378 VPDALALPPGF-KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALR 436 VP + LP + ++P VL G +LK T CL RG +A +SQH+GDL + + E R Sbjct: 431 VPRPVMLPEAWGSDLPCVLGAGGELKATLCLTRGNEAFVSQHVGDLENAPTFGFYEEVAR 490 Query: 437 LMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLD 492 +Q++ + P VV D HP ++S++ A E+ LP + HH AHAA+ L EH Sbjct: 491 HLQDLLEVRPAAVVCDLHPDFLSTRHATELARREGLPLWHLQHHAAHAASVLTEHG---H 547 Query: 493 GGDVIALTLDGIGMGENGALWGGECL--RVNYRECEHLGGLPAVALPGGDLAAKQPWRNL 550 G +AL LDG G+G + ++WGGE L ++ + LG L LPGG+ A ++PWR Sbjct: 548 TGPALALALDGTGLGTDKSIWGGELLFMELDAPRWQRLGRLAPFRLPGGEAAIREPWRIA 607 Query: 551 LAQCLR--FVPE-----WQNYSETA-----SVQQQNWSVLARAIERGINAPLASSCGRFF 598 L L+ PE W E+ + Q + ++ RG+N P SS GR F Sbjct: 608 LGLALQTGMAPEVLTGIWTAGGESGDDVRRAPQAMAVTAVSEMWRRGLNCPSTSSAGRLF 667 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASC--------------------HGVTH--PV 636 DAV+AALG ++YEG+AA LE AA H + P+ Sbjct: 668 DAVSAALGLC-THITYEGQAAIRLEDAAARSPLPEQWWRMGPEELRAPQPQHELLSALPL 726 Query: 637 TMPRVDNQLDLATFWQQWL--NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 T QLD + L + PV A FH LAQGFAAL A G+ + Sbjct: 727 TEEGGLWQLDGPALFAAVLAQRHRLPVEDLAARFHWQLAQGFAALAVRAAGPTGVRVVGL 786 Query: 695 SGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 SGGV+ N LL L LA T L Q +P GDGG++LGQ A A AG Sbjct: 787 SGGVMQNALLARLLPLLLAAHGLTPLCQQEVPPGDGGIALGQAAWAQACLRAG 839 >UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria RepID=A5EUI8_BRASB Length = 755 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 292/757 (38%), Positives = 404/757 (53%), Gaps = 40/757 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQH 64 G + + G+VQGVGFRPFV +LA+QL L G V N V++ +R D + F + L Sbjct: 12 GRSIEVVGRVQGVGFRPFVQRLAKQLGLAGWVRNYSGHVQILVRGDRGSLDQFAMDLIAK 71 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 P AR P + + +GG ++ PD + C CLAE++ P RRY Sbjct: 72 APAFARPQIESIVPTYTDEFDDFLIVESGSGGLSAVELAPDQSICEDCLAEIHDPTARRY 131 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPF NCT CGPR+TIIR +PYDR T MA F LC C EY DP DRRFHA+P+ACP+C Sbjct: 132 RYPFANCTQCGPRYTIIRKLPYDRANTTMADFALCRRCRGEYADPNDRRFHAEPIACPDC 191 Query: 185 GPHLEWV-SHGEHA-EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP L +V + G+ A E + AL AA+ L+ G VA+KGIGG+HL CDA +AVA LR Sbjct: 192 GPRLRFVAADGDLAVENDDALAAAVDLLRRGLTVAVKGIGGYHLLCDATRESAVARLRQS 251 Query: 243 KHRPAKPLAVMLPVADGLPDAARQL----------LTTPAAPIVLVDKKYVPELCDDIAP 292 K+RP KP AVM+P D L A R+L L P+ PIVLV K+ L +A Sbjct: 252 KNRPHKPFAVMVPTDDKL--AWRRLAAIDVVEEAALLDPSRPIVLVRKRPESPLAPAVAS 309 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + VG+MLP +PL HLLL + P+V TS N+SG+P L DGFL H+ Sbjct: 310 GMAYVGLMLPYSPLHHLLLDAFEKPVVATSANISGEPVLTDAADVERRLARCCDGFLHHD 369 Query: 353 RDIVQRMDDSVVRE-SGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I + DD VV+ +G+M LR RG P + P + P+L G LK T L Sbjct: 370 RAIERPADDPVVQVIAGQMKSLRLGRGTAPLTIKTP--YLLPEPILACGGQLKTTVALAF 427 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 G++ V+S H+GD+ + + +A +Q++Y +++VHDAHP + S++W L Sbjct: 428 GDRIVISPHIGDMGNMRSLRVFEQAANGLQSLYGTVARHIVHDAHPDFTSTRWTSRQRLK 487 Query: 470 TQTVLHHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 + + HH AHA+A EH + P+ + DG+G G++G WGGE L + Sbjct: 488 SAAIQHHLAHASALAGEHGREAPM-----LVFAWDGLGFGQDGTSWGGETLMGSPGRWRR 542 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 +G + + L GGD A +PWR+ + C +W N+ ++ W + +E Sbjct: 543 VGTIRPIRLVGGDRVALEPWRSACSVCWEAGIDWGNHRPEFVDVRRVWETKSGTLE---- 598 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH-PVTMPRVDNQLD 646 S+ GR FDA AA LG A +SY+G A +E++A S + PV +D Sbjct: 599 ---TSAVGRLFDAAAALLGLA-EAVSYDGHAPALVESIAGSLPDASPLPVLEAGDLRIMD 654 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 L + PV++RA AFH ALA A R + ++ G ++ +GGV NRLL Sbjct: 655 WTPLVPLLLEAEVPVSRRAAAFHAALAATILADARYRRSVDGTNSVGLTGGVFQNRLLTE 714 Query: 707 RLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 R L F +L + +P DGGLS GQ V AAR Sbjct: 715 RAVALLKCDGFEILLHERVPPNDGGLSFGQAVEFAAR 751 >UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TVE0_SHEHH Length = 795 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 287/791 (36%), Positives = 400/791 (50%), Gaps = 63/791 (7%) Query: 1 MAKN-TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET--- 56 M KN +QL+I G VQGVGFRPFV++LA +LNL G V N+ +GV + + P Sbjct: 1 MTKNLEKSRLQLKITGIVQGVGFRPFVYRLAHELNLTGTVLNNSEGVTIEAQGRPAELAL 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAE 115 F PPLARID++ P F+I S ++ V D TC C + Sbjct: 61 FEAAFSNQAPPLARIDNINVTPLPVIDDCDLFSIVHSEKESLAVVAVSSDKCTCEDCFKD 120 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 +N R +RYPF NCT+CGPR+++I A+PYDRP T MA F +CP C++ Y DP+DRR+H Sbjct: 121 INDINNRHFRYPFTNCTNCGPRYSLINALPYDRPNTAMADFDMCPDCERAYLDPMDRRYH 180 Query: 176 AQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQPV+CP+CGP L + S + +E AL+ AI L GKI+AIKGIGGFHL CDA N+ Sbjct: 181 AQPVSCPKCGPQLSFKSADLTLLSSKETALEDAINSLIEGKILAIKGIGGFHLVCDATNN 240 Query: 234 NAVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDK----KYV 283 +V LR RK+RPAKP AVM+ D A Q+L++ PI L+ K Sbjct: 241 QSVELLRQRKNRPAKPFAVMVENIDAAKRLVTGNTAEWQVLSSAERPITLMRKIDAHDVE 300 Query: 284 PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 P L D +AP ++ +G+ LP PL LLL ++ PLVMTS NLSG+P + L Sbjct: 301 PSLSDLVAPQIDRLGIFLPYTPLHQLLLNGVKRPLVMTSANLSGEPIITDSVAINCKLAN 360 Query: 344 IADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 + D L HNR I+ DDSVV+ + ++LR +RGY P + + +L LGA Sbjct: 361 VIDNILDHNRPILNGCDDSVVQVINDKLQVLRLARGYAPLSFYSEQPLEE--SILALGAQ 418 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KN+ C LS H+GDL + + L +Y F +VHD+HP Y +S Sbjct: 419 QKNSICFGIEHNLFLSPHIGDLVSIEAEEYFHHTLNTFSRLYGFKASQLVHDSHPDYATS 478 Query: 461 QWAREMNL-PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 +WA + T +V HH+AH + +A ++ V+ + DG G+G++ LWGGE LR Sbjct: 479 RWALSQAINNTSSVQHHYAHVLSVMAANKI---TTPVLGFSFDGTGLGDDDTLWGGELLR 535 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL-RFVPEWQNYSETASVQQQNWSVL 578 + + + L L AL GG+ A KQP R LL+ L + PE + +++ + ++ Sbjct: 536 CDVHQYQRLSHLSTFALIGGEQAIKQPVRILLSILLEKHSPEVIYKLDIPALKALSPTMF 595 Query: 579 ARAIE--RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT--- 633 ++ + + SS GR FDAVA ALG T YEG+A +E A S + Sbjct: 596 TNLVKLWQTNTSIKTSSIGRLFDAVAVALGMISDT-QYEGQAGILIETAANSLSSASELN 654 Query: 634 --------HPVTMPRVDN--------QLDLATFWQQWLNWQ---APVNQ---------RA 665 P+ P + + D+ QW + + V Q RA Sbjct: 655 HFDGQFKLQPLLCPAPETIAEHHEPIRFDIKQSNGQWDSSELLGQIVEQITLMPLTPLRA 714 Query: 666 WAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSL 723 A L+ E A T +V GGV NR L R L LL + Sbjct: 715 ALIAKAFMDALCNLVCECAKDHLDTPIVLCGGVFQNRYLLERCEKQLNAQGNQLLSSNKV 774 Query: 724 PAGDGGLSLGQ 734 P D G++LGQ Sbjct: 775 PINDAGIALGQ 785 >UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCDBC7 Length = 780 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 302/770 (39%), Positives = 399/770 (51%), Gaps = 48/770 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPP 67 R+ G VQGVGFRPFV++LA +L+L G V ND GV + P ++F L P Sbjct: 20 FRVSGIVQGVGFRPFVYRLAVRLSLGGWVLNDSAGVGIEAEGTPAALDSFGEALRTQAPL 79 Query: 68 LARIDSVEREPFIWSQLPTEFTIR---QSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 A + +V + + + E R G T + PD A C C E+ + +RR Sbjct: 80 AAAVTAVT---YTETAILGEVLFRILPSPAGEPARTLVSPDLAVCADCRREILSETDRRQ 136 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 Y F NCT+CGPR++IIR +PYDRP T MAAF +CPAC EY DP DRRFHAQP AC C Sbjct: 137 GYAFTNCTNCGPRYSIIRGVPYDRPLTSMAAFHMCPACQHEYDDPADRRFHAQPNACAAC 196 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 GP + ++ G A+ L+ A + G IVAIKGIGG+HLACDAR+ AV LR RK Sbjct: 197 GPSYQLLAEGAAADGNP-LEKAREIIAAGGIVAIKGIGGYHLACDARSDEAVTRLRRRKR 255 Query: 245 RPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE-- 296 R AK LAVM + + + + L +PAAPIVL+ ++ P+ D +AP + Sbjct: 256 REAKALAVMAGALETVRRLCAVSEEEERWLASPAAPIVLLQRR--PDAEDAVAPSVAPGN 313 Query: 297 --VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 +GVMLP P+ LLL VMTS NLSG+P + A L IAD L+HNR+ Sbjct: 314 PCLGVMLPYAPIHFLLLAPDDL-WVMTSANLSGEPIIYDDAAAEQGLAEIADAILMHNRE 372 Query: 355 IVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV R+DDSV+R +++RRSRG+ P LALP F VL GA+LK+TFCL RG Sbjct: 373 IVHRVDDSVLRMMAGGRQIVRRSRGFAPTPLALP--FAPQASVLAGGAELKSTFCLTRGN 430 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMN 467 +A LS+H+GDL+ + + E + + ++ P+ + D HP Y+S + A Sbjct: 431 EAFLSEHIGDLTHRSVLASYEETIAHYEQFFETKPELLAADLHPAYLSGRCLAARAEREG 490 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HHHAH AA LAEH V+ LDG G G++G WGGE L + E Sbjct: 491 IPLVRVQHHHAHIAAVLAEHACH---ERVLGAALDGTGWGDDGTAWGGEFLAADMAGYER 547 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ--QNWSVLARAIERG 585 L + LPGGD AA++PWR L E Q W +L +A G Sbjct: 548 LAHFACIPLPGGDRAAEEPWRLALWVLYGLHGERLAMHAPGFAAQLPAGWQLLMQATAAG 607 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE--ALAASCHGVTHPVTMPRVDN 643 ++APL SS GR FDA AA LG YEG+AA LE A A G P + Sbjct: 608 VSAPLTSSAGRLFDAAAALLGVCLVN-RYEGQAAIELELRARTAQREGRILPYVLRGAPG 666 Query: 644 QL--DLATFWQQWLNWQAPVNQ-----RAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + D + ++ RA FH +A A ++ A G+ T +G Sbjct: 667 AMTADFLPVLNALADGAEQISAEERAGRALDFHVTMAAAVAEVLGVLAVHTGLRTAALAG 726 Query: 697 GVIHNRLLRAR-LAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 GV N LL + LA D+ +L P P DGG++ GQ A AR G Sbjct: 727 GVFQNALLLEQVLARIGGDYRVLLPHLAPPNDGGIAYGQAAAALARMKNG 776 >UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DZ8_THICR Length = 775 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 289/778 (37%), Positives = 407/778 (52%), Gaps = 57/778 (7%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 M + S ++L+I G+VQGVGFRPF++QLAQ L LHG V N+ GV V+L+ P+ +Q Sbjct: 1 MTLDASIQLRLQIFGRVQGVGFRPFIFQLAQSLGLHGSVANNTQGVVVQLQGSPQA--IQ 58 Query: 61 LYQHC---------PPLARIDSVEREPF--IWSQLPTEFTIRQSTG---GTMNTQIVPDA 106 +Q C P A +D +E +P ++ F+I S+ G QI PD Sbjct: 59 QFQQCLTTQKPAFFPKQAVVDRIESDPVPSAEQEVFQSFSIMDSSSDDQGAQAIQISPDL 118 Query: 107 ATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEY 166 A C CL E + P RRY PFINC+ CGPR++I+ PYDR + M F +C AC EY Sbjct: 119 AVCDRCLQEFHDPNSRRYHDPFINCSDCGPRYSIVSQSPYDRLHSSMQPFSMCEACATEY 178 Query: 167 RDPLDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGF 224 DP +RRFH Q + C +CGP + + AE E A+Q +LK +VA KG+GGF Sbjct: 179 HDPNNRRFHTQGICCQDCGPTIRLFDALQTPLAEGEDAIQQIAQRLKTSGLVAFKGVGGF 238 Query: 225 HLACDARNSNAVATLRARKHRPAKPLAVM---LPVADGLPDAA---RQLLTTPAAPIVLV 278 HL CDA +S V LR +KHR KPLAV+ L +A L A +LLT+ PIVLV Sbjct: 239 HLLCDATDSETVTRLRQKKHRATKPLAVLCANLEMAQQLAHLAPHEIELLTSEVKPIVLV 298 Query: 279 DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQAL 338 +K+ LCD IAP++N++GV L PL HLL Q + PLV TS NLSG+P + Sbjct: 299 EKRSDTALCDAIAPNINQLGVFLAYTPLHHLLFQYIDFPLVATSANLSGEPILYEVSRVF 358 Query: 339 ADL----QGIADGFLIHNRDIVQRMDDSVVRE-SGE--MLRRSRGYVPDALALPPGFKN- 390 L + + + L +R+IV DDS+V+ +G+ +LR RG P L N Sbjct: 359 EKLCHPDRALVEAVLDFDREIVNPSDDSIVQSINGKPMILRLGRGLAPYYQPLLHQETNE 418 Query: 391 VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV 450 VL +GA K+ G++A+LS +LG+L ++++ + ++ TP VV Sbjct: 419 SQTVLAVGAQQKSAMACADGKRAMLSPYLGELGTLAAFHRFQQTFQNFTTLHHLTPNQVV 478 Query: 451 HDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 506 D H GY S QW A++ LP TV HH+AHA AC+AEHQ V+A DG+G+ Sbjct: 479 SDLHSGYASHQWAADYAQQNALPYTTVQHHYAHALACMAEHQLE---SSVLAFCWDGMGL 535 Query: 507 GENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ-----CLRFVPEW 561 G++ A+WGGE L + E + + L GGD A++QP R LA L V E+ Sbjct: 536 GDDNAIWGGEVLVADTAGYERVLHVKPFKLLGGDQASRQPRRVALAMLFDHYSLEAVLEF 595 Query: 562 QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 + + QQ L ++ +N+P +SS GR FD VA+ G TL YEG++ Sbjct: 596 -DLPTVQAFSQQEIEQLYCLYQQNVNSPFSSSMGRVFDTVASLCGIV-QTLDYEGQSGLW 653 Query: 622 LEALAASCHGVTHPVTMPRVDNQLDLATFWQQW-LNWQ--APVNQRAWAFHDALAQGFAA 678 LEAL + VT Q+D +Q L+ Q ++ R F +AL Sbjct: 654 LEALYDA--AVTDAYDCRIEQQQIDFEPMIEQLILDHQQGVAISTRVSRFLNALVNVIDT 711 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQ 734 + + ++ +V +GGV N+ L L + AD F Q P DG ++LGQ Sbjct: 712 ISDQFKSL----PVVVTGGVFQNKTLMTILENRFADKAQPFYFQQRTPLNDGSIALGQ 765 >UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B205_SULD5 Length = 744 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 271/744 (36%), Positives = 388/744 (52%), Gaps = 44/744 (5%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLA 69 I G VQGVGFRPFV+ LA + L G V N+ GV + + E+F L+ P LA Sbjct: 11 IEGIVQGVGFRPFVYTLALRYGLFGFVLNNEKGVVIEVEGSFMSLESFESALFHELPSLA 70 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPGERRYRYPF 128 RID +E I Q F I ST G+ + I+PD + C ACL E++ P RRY Y F Sbjct: 71 RIDFFTKEE-IPPQYEKSFEIAHSTKGSHKSSLILPDMSLCDACLKELHDPNNRRYHYFF 129 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP-- 186 NCT+CGPR++I++ +PYDRP T M F +C AC KEY +PLDRR+HAQP++C ECGP Sbjct: 130 TNCTNCGPRYSIVKTVPYDRPNTSMHPFCMCEACQKEYTNPLDRRYHAQPISCIECGPTL 189 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + A EAAL A ++ G IVA+KG+GGFHL CDA N V LR RK R Sbjct: 190 FLRSIEGKIVATNEAALHHLAALIRAGNIVAMKGMGGFHLVCDASNEKVVHRLRERKKRA 249 Query: 247 AKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCD-DIAPDLNEVGV 299 +KP AVM + + ++ +T+ PIVLV + L +AP L+ +GV Sbjct: 250 SKPFAVMFKTIEAIEAVCEVGIKEKEAITSLLRPIVLVKHQTKNTLIAPSVAPRLDRLGV 309 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP PL +L + L+ P+V TS NLSG+P +Q + L + D +L +NR+IV Sbjct: 310 FLPYTPLHVMLFEYLKNPMVATSANLSGEPILYDAKQVVEKLSHVIDYYLDYNREIVNSS 369 Query: 360 DDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSVV+ G+ ++R SRG P + ++ +LC+GA KN + Q V+S Sbjct: 370 DDSVVQFVGDARILMRSSRGIAPQSFRFVG--EDERKILCVGAHQKNAIAIYWNHQMVIS 427 Query: 417 QHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHH 476 ++GDL + L + Y+F P+ +V D HP Y S+QWA++ +P V HH Sbjct: 428 PYIGDLDTLASCELFEAMLERFKRFYNFEPELIVADKHPRYFSTQWAQKQGIPYVLVQHH 487 Query: 477 HAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVAL 536 +AH + + EH+ V+ + DG G GE+G +WGGE L + + E + AL Sbjct: 488 YAHILSAMCEHKL---NETVLGIAWDGTGYGEDGTIWGGEFLVCDREKYERVAYFEPFAL 544 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS-VQQQNWSVLA-----RAIERGINAPL 590 GGD + K R +LA L W E A+ V + + LA + + IN+PL Sbjct: 545 LGGDASIKDIKR-ILASLL-----WDALGEDANAVLLEYFDALALKRLHQVYHKKINSPL 598 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 SS GR FDAVA G +SY+GE+ +E L + T+ + ++ Sbjct: 599 CSSVGRLFDAVAVLCGL-EGEVSYDGESGLLIEGLFNP--SIREHYTVTFREKEIGYKVM 655 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + + + + P + A F + L F + T + V +GGV NR L +L Sbjct: 656 FIEMIQDKEP-SLIASKFLNTLVYIF-----NEVTQKYPYKKVVAGGVFQNRTLLEQLLE 709 Query: 711 YLADFTLLFPQSLPAGDGGLSLGQ 734 + L FP ++ DGG+ +GQ Sbjct: 710 KREE-KLYFPHNIAINDGGICVGQ 732 >UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosarcina RepID=Q46FH7_METBF Length = 767 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 276/762 (36%), Positives = 406/762 (53%), Gaps = 44/762 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPP 67 L I G VQGVGFRPF+ QLA+ L G V N G+ VE+ + +E + F+ ++ + PP Sbjct: 8 LHITGTVQGVGFRPFISQLAKVHGLFGYVKNLGNYVEILVEGNKESLDNFIKEIPEKKPP 67 Query: 68 LARIDSVERE--PFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRY 124 LA++ ++ + PF ++F I S G I+P D A C C +E+ P R + Sbjct: 68 LAKVKEIKTKNTPFFGY---SKFIIVPSESGVFENSIIPPDTAICEQCRSEIFDPSSRYF 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPF CT+CGPR+T +R +PYDR T MA FPLCP C+ EY DPL+RR+HAQPV CP+C Sbjct: 125 HYPFTVCTNCGPRYTTVRTLPYDRENTTMADFPLCPECETEYTDPLNRRYHAQPVCCPKC 184 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQ---LKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 GP + W+S E +A I L+ G I+AIKG GGFH+ACDAR V LR Sbjct: 185 GPEI-WLSDSEGNVLVKGYEAIIHASDLLQQGSILAIKGFGGFHIACDARKEMPVNELRR 243 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 R RP +P AVM A+ L R+ LT+ PI ++ L + + L+ Sbjct: 244 RLRRPEQPFAVMAKNAEVAETFAELEGVGREYLTSYRRPITVLPSSRESGLAESVTSGLH 303 Query: 296 EVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 +GVMLP Q+LL + VMTS NL G+P + N++AL L+GI D +L+HNR Sbjct: 304 NIGVMLPYTGTQNLLFDRVPDAVYVMTSANLPGRPMVVENKEALEKLKGIVDYYLLHNRV 363 Query: 355 IVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I R DD+V+R +RRSRG+VP+ + LP V + +GA++ +T + +G+ Sbjct: 364 IANRNDDTVIRVVNGKAAFIRRSRGFVPEPVELP---FEVKASIGVGAEMNSTVTVAKGK 420 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NLPT 470 A +SQ++G+ S E +R + + P Y D HP + ++++A +M T Sbjct: 421 LAYVSQYIGNTSHVETFRYHSEVVRHLIQLTGIEPLYWGCDLHPAFNTTRFALKMGGEDT 480 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH AH A +A++ PLD ++ + LDG+G G +G +WGGE +Y E +G Sbjct: 481 LQVQHHQAHMLALMADNSLPLD-SRILGIALDGVGYGTDGTVWGGELFESSYFGYERIGH 539 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFV--PEWQNYSETASVQQQNWSVLARAIERGINA 588 L +PGGDLA++ P R +L + E + + +S + + +E G+N Sbjct: 540 LFPQPMPGGDLASRIPSRMVLGILFEKLGRAELEKLPLSFPKGAMEFSTVMKQLETGVNV 599 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-SCHGVTHPVT--------MP 639 +SS GR DA AA LG +YEGE A LE+ A S H V P+ +P Sbjct: 600 IRSSSTGRVLDAAAALLGIC-EIRTYEGEPAMKLESAATKSTHSVDLPIIFTNDNDSGVP 658 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 +D L ++ L+ + P A+A ++ A G + L A RG+ + SGGV Sbjct: 659 LLDTTELLLGAYE--LSGKYPPVDLAFAVEESFATGISELAISLAAKRGLEKIGLSGGVA 716 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 +N + + +A + A F L + +P GDG +S GQ + A Sbjct: 717 YNNHITSCIARTVTEAGFEFLVHRQVPCGDGCISFGQALAAG 758 >UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q2Y8F5_NITMU Length = 770 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 302/750 (40%), Positives = 404/750 (53%), Gaps = 39/750 (5%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPPLA 69 I G+VQGVGFRPFV++LAQ+ L G V N V + ++ + F V L PPLA Sbjct: 21 IGGRVQGVGFRPFVYRLAQRFRLTGHVQNTSGQVVIEAAGKKKLLDVFGVALLAEAPPLA 80 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 + + V E + + ++ S + I PD C C EM TPG+RRYRYPFI Sbjct: 81 QPEMVHVEKIPYLERDGFEILQSSDNSSGRIHIPPDYFLCDDCKREMQTPGDRRYRYPFI 140 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 NCT CGPR+T+I +PYDRP TVM +F LC C +EY DP DRRFHA+PVACP CGP L Sbjct: 141 NCTQCGPRYTLITKLPYDRPNTVMTSFELCSQCLREYEDPGDRRFHAEPVACPTCGPQLC 200 Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKP 249 + AAL A++ L+ G+IVA+KGIGG+HL CDARN A+ LR KHRP KP Sbjct: 201 LSAPEGRINGPAALTASVTALRRGEIVAVKGIGGYHLMCDARNETAIGQLRTNKHRPHKP 260 Query: 250 LAVMLPVA--DGLP--------DAARQ-LLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 LA+M P DGL DA Q LL PA PIVL+ ++ L I P + E+G Sbjct: 261 LALMFPWCGDDGLAQVRDELEIDAQGQALLRAPARPIVLLRRRRDSMLPRSITPGIREIG 320 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 VMLP +PL HLLL EL P+V TSGN+SG+P +N +A L + FL HNR I + Sbjct: 321 VMLPYSPLHHLLLHELDKPVVATSGNVSGEPVLTANAEAETRLARVTRVFLHHNRPIARP 380 Query: 359 MDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 DD VVR ++R RG P LP F V P+L +G +KN+ L +A+L Sbjct: 381 ADDPVVRVIAGKPRLVRVGRGVGPVEFDLPGLF--VQPLLAVGGHMKNSIALGWNGRAIL 438 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLH 475 S H+GDL + + + +Q +Y PQ +V DAH GY SS+WA LP V H Sbjct: 439 SPHIGDLDAPRSMAVFEQVISDLQRLYGAFPQAIVCDAHKGYASSRWADRQGLPLIPVWH 498 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAHA+A AEH L + T DG+G+GE+ LWGGE L + L Sbjct: 499 HHAHASALAAEHSREL---TWLTFTWDGVGLGEDNTLWGGEALLGRPGVWRRVARLCPFR 555 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 LPGG+ A ++PWR+ A C W++ E ++ + +L +A ++G+N+ + ++ G Sbjct: 556 LPGGERAGREPWRSAAALC------WESGIEPPAMGIR-LELLKKAWKKGLNSRVTTAGG 608 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH--PVTMPRVDNQLDLATF-WQ 652 R FD A+ LG SYEG+A LE +A +C + + +P + L T W+ Sbjct: 609 RLFDGAASLLGLLRHA-SYEGQAGMYLENIADACDSESEVDVIDLPLFQSATGLLTADWK 667 Query: 653 ----QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 LN PV +RA FH +LA + + +GGV N+LL Sbjct: 668 PLLPALLNEAIPVARRAMQFHLSLANSIMVQAQRIHASTPFDRVGLTGGVFQNKLLAELA 727 Query: 709 AHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 L A F P+ P DGG++LGQ V Sbjct: 728 VSQLTAAGFEAYLPERTPCNDGGIALGQLV 757 >UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 Tax=Heliobacteriaceae RepID=B0TCN1_HELMI Length = 844 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 277/661 (41%), Positives = 368/661 (55%), Gaps = 51/661 (7%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 +N + + I G VQGVGFRPFV++LA +L L G V N GVEVRL E FL Sbjct: 4 GENANQARMVLITGTVQGVGFRPFVYRLATRLGLAGWVQNGAKGVEVRLEGALGSIEAFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTE----FTIRQS-----TGGTMNTQIVPDAATC 109 L PPL+RID ++ + P E F+I S T + ++ PD A C Sbjct: 64 QALKAEAPPLSRIDRIQ-----VREAPVEGLRLFSIAVSDAPDRTADVAHARVPPDVALC 118 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 P C EM+ P +R Y YPF NCT+CGPRFTIIR +PYDR T MAAFP+CPAC ++Y DP Sbjct: 119 PECRREMDDPADRHYGYPFTNCTNCGPRFTIIRQVPYDRAQTSMAAFPMCPACRRDYDDP 178 Query: 170 LDRRFHAQPVACPECGPHLEWVSHGEHAEQEAA-LQAAIAQLKMGKIVAIKGIGGFHLAC 228 LDRRFHAQP ACP CGP + W + + E ++ ++ G IVA+KG+GGFHL C Sbjct: 179 LDRRFHAQPTACPLCGPRV-WFAGSDGQEVIGDWVRLFRDSIRQGNIVALKGLGGFHLVC 237 Query: 229 DARNSNAVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKY 282 D RN+ A+A LR RK RPAK LAVM L + D L+ P APIV+++++ Sbjct: 238 DGRNATAIAELRRRKRRPAKALAVMGRDLTTLRRICRISDREAAALSGPEAPIVVLERRE 297 Query: 283 VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ 342 L ++AP + +G MLP PL HLL E LVMTSGN G P N AL L Sbjct: 298 DAALPSNLAPGTHTLGAMLPYTPLHHLLFDESLDLLVMTSGNPGGLPLVRDNRLALTQLS 357 Query: 343 GIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALP-PGFKNVPPVLCLG 398 GIAD F+ H+R+IV R DDSVVR ++ + RRSRGYVP+ + +P P K +L +G Sbjct: 358 GIADAFVFHDREIVSRADDSVVRVIDDTLQFYRRSRGYVPEGIPIPWPEGKKDRTLLAVG 417 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 A++KN F L A LSQH+GD+ + + E+LR ++ + D +PQ V D HP Y Sbjct: 418 AEMKNAFALFGRGAAYLSQHIGDVDTCEGRDNYLESLRNLERLLDLSPQRVARDCHPQYR 477 Query: 459 SSQWAREM--------------NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGI 504 + A E+ LP + HHHAH AA LA++ + G I + LDG Sbjct: 478 MTALAEEIAFGDGAPTGRSEISALPIDDIQHHHAHLAAVLADNG---ETGPAIGVILDGT 534 Query: 505 GMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY 564 G GE+G + G E L + R+ L V LPGG+ A ++PW A E + Sbjct: 535 GFGEDGMIRGFEILTGDLRDYRRHFWLRPVPLPGGEAAIRRPWLTAAAFLGEAFGE-AGW 593 Query: 565 SETASVQQQNWSVLARA---IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 S+ ++ +++ +A E+ +N L SS GR FDAVAA LG SY+G+AA Sbjct: 594 SQAKALFPDRAAMVEKARRMAEKRLNTTLVSSAGRLFDAVAALLGLCWEN-SYDGQAAIE 652 Query: 622 L 622 L Sbjct: 653 L 653 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Query: 660 PVNQRAWAFHDA---LAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--D 714 PV A FH+ +A+ A+++RE++ GI + GGV N L L Sbjct: 759 PVEVMASRFHNTIARMAEAAASVLREES---GIQRVALGGGVFQNPYLFTLTRRLLVRRG 815 Query: 715 FTLLFPQSLPAGDGGLSLGQGVIA 738 F +L P+ +PA DGGL+LGQG I+ Sbjct: 816 FFVLVPRHVPANDGGLALGQGAIS 839 >UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridium RepID=A5I2V8_CLOBH Length = 812 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 264/789 (33%), Positives = 416/789 (52%), Gaps = 71/789 (8%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPP 67 ++I G VQGVGFRPFV+ A + NL G V N G VEV L +E+ ++F+++L + P Sbjct: 17 IKIEGIVQGVGFRPFVYNRATEFNLKGYVKNKGGMVEVDLEGYKENIKSFILELIKSPPI 76 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYRY 126 +A+I+ + + F+ +FTI++S+ + + + PD A C C+ E+N +RY Y Sbjct: 77 MAKIEDL-KCKFLKPIDYKDFTIKKSSNEKNSVKFISPDVALCKNCIKELNLSTNKRYEY 135 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 FINCT CGPR++II+++PYDR T M F +C +C +EY P +RRFHA+P C CGP Sbjct: 136 GFINCTDCGPRYSIIKSLPYDRENTTMKKFTMCNSCKEEYNIPDNRRFHAEPNCCSLCGP 195 Query: 187 -----------------------------------HLEWVSHGEHAEQEAALQAAIAQLK 211 H +++ + ++ + AI +K Sbjct: 196 SLILLDNKKQVICTNSKKEYINNTSNNNYYNENKIHESYINVANLSYKKHPIYTAIELIK 255 Query: 212 MGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM---LPVADGLPDAAR--- 265 G IVA+KGIGGFHL CD +N A+ LR RK RP KPLA+M L + L ++ Sbjct: 256 KGYIVAVKGIGGFHLVCDGKNKKAIENLRIRKKRPHKPLAIMCKDLKIVKELCYVSKLEE 315 Query: 266 QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNL 325 Q+L PI+++ KK L D+I+P +GVMLP +PL +LL +E ++ TSGN+ Sbjct: 316 QILEGTKKPILILKKKATNILPDNISPFNKHLGVMLPYSPLHYLLFKEGLDIIIATSGNV 375 Query: 326 SGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDAL 382 SG+P N +A+ +L+ IAD FLIHNRDI +DDSVV+ + ++R RGY P L Sbjct: 376 SGRPMEYKNCEAIENLKTIADYFLIHNRDIHTPIDDSVVKVINKKESLIRIGRGYAPYTL 435 Query: 383 ALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIY 442 + K +L GA+ KNTFCL + +SQ++GDL + + + +Q + Sbjct: 436 NI----KTKNELLAKGAEEKNTFCLSQKGYVYMSQYIGDLKNIDCYNRHLNTIEHLQTLL 491 Query: 443 DFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 D P+ + D HP + ++ + + + V HHHAH +C+ EH VIA+ D Sbjct: 492 DTNPKISMEDLHPNFNTNYENKNYDRIIK-VQHHHAHMVSCMVEHSL---FDRVIAVVFD 547 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G G G++ ++WGGE L + E +G L V + GGD + K+PWR L+ + ++ Sbjct: 548 GTGFGKDNSIWGGEFLIGDRTYFEKVGHLKKVKIQGGDKSIKEPWRCALSYL--YSINYE 605 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 S +V+++ ++ +A+ IN +SS GRFFDAV + +G +SY+G+A L Sbjct: 606 ESSIIKNVEEEKIKIIKKALYNNINCYTSSSMGRFFDAVTSLIG-IRNMVSYDGQAPIEL 664 Query: 623 EALAASCHGVTHPVTMPRVDN--QLDLATFWQ---QWLNWQAPVNQRAWAFHDALAQ--- 674 E + + + ++ ++DN Q+D + L ++ + FH+ + Sbjct: 665 ENIIDEPISLYYNYSINKIDNVFQIDYKDIILGIIKDLKENKDLSTISSKFHNTVIDFTC 724 Query: 675 GFAALMREQATMR-GITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLS 731 +++ M+ + +V SGGV N L + L D F + F + +P D G+S Sbjct: 725 NLVCKIKKTYEMKCKLDNVVLSGGVFQNNYLLKGVYRTLKDNGFKVFFNEKVPINDEGIS 784 Query: 732 LGQGVIAAA 740 LGQ I + Sbjct: 785 LGQLAIGDS 793 >UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN41_9GAMM Length = 782 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 298/766 (38%), Positives = 408/766 (53%), Gaps = 45/766 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFL-----VQLYQH 64 Q+ I G+VQGVGFRPFV+ LA +L + G V N +GV + + +Q Sbjct: 7 QIEIHGQVQGVGFRPFVFNLANRLGIVGHVANGPEGVSIFAQGSSSQLTDLLESLQTAHE 66 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 P +A++ S+ + F I +S G ++ + PDAA C CL E+ P +RRY Sbjct: 67 QPTMAKVHSLVATHAEAVRGLDTFEIVKSAEGEVDLAVTPDAAVCQDCLEELFDPNDRRY 126 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPFINCT+CGPR+++I+++PYDR T MA F LC CD+EY+ P +RRFHAQP AC C Sbjct: 127 LYPFINCTNCGPRYSLIKSLPYDRANTTMAPFTLCSPCDQEYKHPENRRFHAQPTACASC 186 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 GP L++ + + + AA+A ++ GKIVAIKGIGGFHL CDA+N AV LR RK Sbjct: 187 GPSLKFRGVDGKTDPD-PIGAALALMQQGKIVAIKGIGGFHLVCDAQNPEAVQRLRDRKQ 245 Query: 245 RPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 RP KP AVM L L A + L API L K L D +AP LN +G Sbjct: 246 RPEKPFAVMGANLESLRSIAELSRAREERLKGHDAPICLC-PKVEDALPDVVAPGLNWLG 304 Query: 299 VMLPANPLQHLL-------------LQELQC-PLVMTSGNLSGKPPAISNEQALADLQGI 344 +MLP P+ +LL L+E Q LVMTS NLSG P +E+AL L I Sbjct: 305 IMLPHTPIHYLLFHRAAQQPTGTAWLKEQQTLTLVMTSANLSGNPLITQDEEALKQLAHI 364 Query: 345 ADGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNV-PPVLCLGAD 400 ADGFL+HNR I R DDSV V ++R RG P + LP K + VL +GA Sbjct: 365 ADGFLLHNRAIETRCDDSVISMVSSQASIVRSGRGLAPTRVKLPDSLKGLGKSVLAVGAF 424 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KNT CL +G+ A +SQ++GDL + E + + ++ D P VV D HP + SS Sbjct: 425 FKNTICLTKGDSAYVSQYIGDLDNPECCRNLSETVAHLCSLLDIRPDLVVADLHPDFYSS 484 Query: 461 QWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE 516 ++ARE +P V HHHAH AA + EH+ GD++ + LDG+G+G++G LWGGE Sbjct: 485 RFAREYAQANQIPLMQVQHHHAHVAAVVCEHEI---DGDLLGVALDGLGLGDDGQLWGGE 541 Query: 517 CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWS 576 L+V+ E + + +PGGD AA++PWR A E + + + ++ Sbjct: 542 LLKVSGHRSERIAHFSKLKMPGGDRAAREPWRIASAALHELNIESEQVIHLK--ENEGYA 599 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHP 635 V+ + +E+ +N P SS GR FDAVAA L + YE AA LE+ A P Sbjct: 600 VVQQLLEKNLNCPETSSAGRLFDAVAALLDIKQRS-DYEAHAAMLLESAAWQYLKSNPWP 658 Query: 636 VTMPRVDNQLDLATFWQ--QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 P + + + W Q L A FH L G + + + +TT+ Sbjct: 659 QESPLLKTEGNELVIWPLLQRLTECEDKGYAAALFHRQLVDGLVSWVTQAGERYNLTTVA 718 Query: 694 FSGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIA 738 +GG N+LL + L LA+ +L Q LP DG +SLGQ IA Sbjct: 719 LAGGCFLNQLLLSELQAVLAEQMQVLVAQKLPCNDGAISLGQAHIA 764 >UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KXU6_9GAMM Length = 771 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 296/759 (38%), Positives = 408/759 (53%), Gaps = 42/759 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHC 65 ++ I G VQGVGFRPFV++ A+ + G V N GDGV V P E F L Sbjct: 15 LRFEIGGAVQGVGFRPFVFRTARHFGVTGHVANTGDGVIVEAEGAPCALEAFAQALQGSA 74 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERRY 124 P A++ S R I + ++F I ST G + ++PD ATC CL ++ P RRY Sbjct: 75 PAPAQLRSF-RCQSIALRGDSDFVIGDSTVGVQRDAVLLPDLATCRLCLEDIFDPENRRY 133 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPF NCT CGPR++I+ +PYDR T M+ F +C C +EY DP DRRFHA+P+AC C Sbjct: 134 LYPFTNCTACGPRYSILCELPYDRANTTMSGFSMCAECAREYADPQDRRFHAEPIACDTC 193 Query: 185 GPHLE-WVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP + W HG+ + + AL A A ++ G I A+KG+GGFHL DARN+ AV TLR+R Sbjct: 194 GPQIALWDRHGDRIKVRGEALDGAAAIIRSGGIAAVKGLGGFHLLTDARNAEAVRTLRSR 253 Query: 243 KHRPAKPLAVMLP---VADGL---PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP KP A+M+P VA+ L + LL + APIVL+ ++ V + +D+AP L E Sbjct: 254 KRRPNKPFALMVPSLEVAEHLCFVNADEKSLLASSEAPIVLLRQRAVTGVTEDVAPGLCE 313 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+MLP PL HLLL L P+V+TS NLSG+P + ++ALA L +AD FLIH+R I Sbjct: 314 LGLMLPYTPLHHLLLHRLGFPIVVTSANLSGEPIVANEDEALARLGHLADVFLIHDRPIA 373 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPP---GFKNVPPVLCLGADLKNTFCLVRG 410 Q +DSV+R E+ + +R RG P LALP G N VL LG K L+ Sbjct: 374 QASEDSVMRVILEAPQAIRCGRGRAP--LALPVDSLGLGNHLSVLALGGHFKTAATLLIN 431 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 ++A + QH+GDLS + EA ++ + + D HP Y +++ A M P Sbjct: 432 DKATVGQHIGDLSTLAAEHTLAEAAGTLEALRGSKAAVIACDQHPDYATTRLAERMGRPV 491 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH AH + +AEH G V+ + DG G+G +G +WGGE L+V Sbjct: 492 VPVQHHVAHVVSVMAEHGL---SGPVLGIAWDGTGLGPDGTIWGGEFLQVRNDSWMRKAH 548 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRF-----VPEWQNYSETASVQQQNWSVLARAIERG 585 L LPG + A ++P R+ + V E + + A+ + +L + +ERG Sbjct: 549 LRPFRLPGAETAIREPRRSAVGMLYEAFGACGVVENTHLACIAAFSEPEREILCQMLERG 608 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL--AASC----HGVTHPVTMP 639 I +P SS GR FDA AA LG P + S+EGEA LEAL A+SC + P P Sbjct: 609 IQSPWTSSAGRLFDAFAAILGLTPVS-SHEGEAPMRLEALADASSCAPYPFDINAPQGCP 667 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 V + + Q + A V R A + FAA+M + T+ +GG Sbjct: 668 LVIDWFPMVHAVLQ--DLAADVRNRTIAGR--IHGTFAAMMLAIVESTDVGTIALTGGCF 723 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 NRLL A + A ++ ++LP DGGLSLGQ V Sbjct: 724 QNRLLTELAARQIEQAGRQVVLARALPPHDGGLSLGQAV 762 >UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU85_PSYIN Length = 762 Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust. Identities = 279/756 (36%), Positives = 405/756 (53%), Gaps = 46/756 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCP 66 Q+ ++G+VQGVGFRPFV A LNL G V N V + ++ +P + FL QL P Sbjct: 6 QISVQGRVQGVGFRPFVAVTAANLNLTGWVRNIRQSVLIEIQGEPFETQKFLQQLQSKAP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERRYR 125 LA+I+ + + I + T F I +S+G I PD C C E+ RRYR Sbjct: 66 ALAKIEQLNHQQ-IDNNDQTGFHILESSGKNEGVVSISPDIGICEHCQKELFYEENRRYR 124 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFI+CT CGPR++I++ +P+DR T + AFP+C C EY++ DRRFHAQ + C +CG Sbjct: 125 YPFISCTQCGPRYSILQKLPFDRCHTTLNAFPMCEDCLAEYKNLKDRRFHAQGINCAKCG 184 Query: 186 PHLEWVSH-GEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P + +++H GE AE+EAAL AI L+ GKI+A+KG+ GFH+ DA N AV LRARK Sbjct: 185 PQVSFINHKGERIAEKEAALTLAINALQAGKILAVKGLTGFHIMVDACNHQAVLRLRARK 244 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVP-ELCDDIAPDLNE 296 RP KP A+M P L + + LL + APIVL++ K+ L IAP+ Sbjct: 245 QRPEKPFALMYPQLSMVKSDCLLGEQEKLLLCSAIAPIVLLENKHSNLSLSPAIAPNNPY 304 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVML PL L+ + + PLV+TS N SG+P NEQAL L + DGF++H+R+I Sbjct: 305 LGVMLAYTPLHQLICRAINKPLVVTSANRSGEPVCCDNEQALEQLSQLVDGFVMHDREIY 364 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 Q +DDS+V+ +LRR+RGYVPD L L + P ++ LG LKN+ + +G++ Sbjct: 365 QGLDDSIVKFVNHEPMLLRRARGYVPDYLTLDTEY---PSIVALGGQLKNSIAISKGKRL 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 LSQ++G L + + + ++M + T V D HP YV++Q A++ +LP + Sbjct: 422 YLSQYIGSLDNIASVNRHQRTQKIMSRLMGVTADCVACDLHPDYVTTQLAKKQHLPIIST 481 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH AH A + EHQ +D A+ DG G GE+G LWGGE + V + + + Sbjct: 482 QHHLAHLYAAMLEHQI-ID--QAFAVVWDGNGYGEDGTLWGGEFIAVTADKPQRVATFLP 538 Query: 534 VALPGGDLAAKQPWRNLLAQCL----RFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 LPGG A K+P R +A + + + + + L + I IN+P Sbjct: 539 FKLPGGAAAIKEPRRVAVALLYEVYGKKIASNEVLKSLSPFELSTIKQLLKMISNNINSP 598 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH---PVTMPRVDNQLD 646 L SS GR FD +++ L + S+EGEAA LE A + PV N +D Sbjct: 599 LTSSAGRLFDGISSLLNLGQIS-SFEGEAAMRLEFAAKTSKDKGSYPVPVDFAVTPNIID 657 Query: 647 ----LATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 LA N A + +R FH++ A ++ + A G+T ++ +GG Sbjct: 658 WRPMLAAIITDIGNHVSSAIIARR---FHNSA----AIIILKIAQHYGVTQILLTGGCFQ 710 Query: 701 NRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 N LL L + +L+ + LPA D L +GQ Sbjct: 711 NSLLIEITFALLQEQGIAVLWHKKLPANDASLCVGQ 746 >UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBV8_9PROT Length = 727 Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust. Identities = 259/755 (34%), Positives = 386/755 (51%), Gaps = 67/755 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCPPLARI 71 I G VQGVGFRP V+++A LNL G V N DGV + + ++ + FL +L + PPLA+I Sbjct: 7 INGIVQGVGFRPTVYKIATSLNLKGYVLNSSDGVIIEIEGKNRDKFLNELKNNLPPLAKI 66 Query: 72 DSVEREPFIWSQLP----TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 + +E +LP +F I+ S T T I PD + C CL EM RRY YP Sbjct: 67 EKIE-----CFKLPLKNYKDFEIKYSINTTKTTSISPDISVCEDCLKEMRDKNNRRYLYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPR+TII +PYDR T M F +C C KEY +P++RRFHA+P++C ECGP Sbjct: 122 FINCTNCGPRYTIIENIPYDRVNTSMKKFKMCENCKKEYENPIERRFHAEPISCYECGPK 181 Query: 188 LE---WVSHGEHAEQE-----AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 L + +G+ A ++ ++ ++K GKIVAIKG+GGFHL CDA N +V L Sbjct: 182 LSVKFKIENGKWAVKDFNREIKKIEFIANKIKEGKIVAIKGLGGFHLVCDATNEKSVYEL 241 Query: 240 RARKHRPAKPLAVML-------PVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 R RK+RP KP A+M AD + + ++L+ + PIV+V KK EL IA Sbjct: 242 RKRKNRPLKPFAMMFRDIEMIKKYAD-ISNKEKELILSKERPIVIVKKK--KEL-KGIAD 297 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 ++ GV LP P+ +LL L P+V TS N+S +P ++++ + L + D L +N Sbjct: 298 KIDRYGVFLPYTPIHYLLFDFLDFPIVATSANISDEPIIRNSKELIEKLGSVVDFILDNN 357 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDI+ DDSVV+ E +R SRG+ P + + K P +L LGA+ KNT L Sbjct: 358 RDIINACDDSVVQVVNEERLFMRLSRGFAPKSFYIDK--KTSPNILALGANQKNTISLYF 415 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 ++ +LS H+GDL G + + + +Y+F ++ D HP Y S++WA N Sbjct: 416 NQKVILSPHIGDLKTLGSIEFFERTINTFRRLYEFKEDVIICDKHPYYESTKWALSQNKE 475 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 + HH +HA + + E+ LD G+ +A DG G G++G++WGGE RV E + Sbjct: 476 VIQIQHHFSHALSVMFENS--LD-GEFLAFLFDGTGYGDDGSIWGGEVFRVTKHNYERIH 532 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQC-LRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 + L G + K P ++ + ++NY +Q + Sbjct: 533 YIKPFKLIGSEKGVKNPSNYAISLIDEQLAKNFKNYEIIKKLQNGPF------------- 579 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 PL SS GR FDAVA G YEG + +E + + + + +LD Sbjct: 580 PLTSSMGRVFDAVAFLSGMIDRN-EYEGISGLIIEKFYN--ENIKGFIDIG-IKKELDFK 635 Query: 649 TFWQ-QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 + +LN + + F ++L L + ++ SGGV N+ L Sbjct: 636 EIFNFAYLN-RGKFELVSSIFINSLVNLVVKLSKYYN-----LPVILSGGVFQNKTL--- 686 Query: 708 LAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 L L + + + +P DGG+S+GQ +A W Sbjct: 687 LGKILKNIYAYYNKEIPINDGGISIGQ--VAYGIW 719 >UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Francisella philomiragia RepID=B0TWC6_FRAP2 Length = 751 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 267/770 (34%), Positives = 389/770 (50%), Gaps = 56/770 (7%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 ++ + G VQGVGFRPF++ LA+ +NL G V N +GVE+ L+ D T F+ + Sbjct: 6 TKILVNGIVQGVGFRPFIYCLAKDMNLCGSVQNTPNGVEILLQCDESTVDSFINDMEAKL 65 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA I+++++ + T+F+I ++ G+ T+I D A C CL ++ P R Y Sbjct: 66 PPLASIETIQKTIYQTESEFTDFSILETQQGSSATKIPADTAICDLCLDDIFNPQSRYYL 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YP+ +CTHCGPRF+ I+ +PYDR T FPLC C Y +PLDR +HAQ VAC CG Sbjct: 126 YPYTSCTHCGPRFSTIQNLPYDRDKTTYKDFPLCDGCHDSYTNPLDRHYHAQTVACSSCG 185 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P L SH AE A++A GKI+AIK GF L DA N+ AV LR RKHR Sbjct: 186 PKL---SHS-FAEISQAIRA-------GKIIAIKSQNGFKLVVDATNTEAVEKLRRRKHR 234 Query: 246 PAKPLAVML----PVADGLPDAARQ---LLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 P KP A+M + + + Q LL T PIVL+ + + IAP +N++G Sbjct: 235 PNKPFALMALNTQSIQEHFAEVTTQQDELLNTTIRPIVLLKRHSTSTISSSIAPHINQLG 294 Query: 299 VMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAISNEQALADLQGI 344 MLP ++L L L++TS N+SG+ +N++A L+ I Sbjct: 295 FMLPTTGSDYILFYHLLNQPNSSSWLNEAYNLALIVTSANISGESIIANNDEAHEKLKDI 354 Query: 345 ADGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 AD + NRDI + DDSV V + +RRSRG VP ++ L + +P +L G L Sbjct: 355 ADLIVTDNRDIAIKSDDSVFHTVIDKNLPIRRSRGLVPQSIQLS---ETLPNILATGTFL 411 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNTFC ++ QA +SQH+GD++ + ++L Q ++ + D HP ++ Sbjct: 412 KNTFCFIKDNQAFVSQHIGDMNSQANIEFFEQSLEHFQKMFGLKFDGIACDLHPDIYTTY 471 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR-- 519 +A++ +LP + HH AH AA + EH G I L LDG G+GE+G GGE Sbjct: 472 FAQKFDLPIYQIQHHQAHLAAVITEHNLQ---GHAIGLVLDGFGLGEDGIARGGELYHCD 528 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 ++ E +G L + GGD AK+PWR LA C ++ E N+ + Q S++ Sbjct: 529 IDNLEFNRIGELDPIEYIGGDKVAKEPWRMALAVCHKYDLEIPNHLKEFP---QAESLIK 585 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + +S GR FDAV++ L +YE +AA LE+L A + + Sbjct: 586 LLQNDSLPKGKTTSMGRLFDAVSSLLNVCHIN-TYEAQAAIELESL-ADISNIQYDTKSV 643 Query: 640 RVDNQLDLATFWQQWLNW-QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 L+L + + V W H LA A + A R I ++ SGG Sbjct: 644 SFKTNLNLKKLLKSIIKCDNISVASNLW--HSTLAYALAQWISNSAQPRNIKNIILSGGC 701 Query: 699 IHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 N+LL L DF + + +P DGG+SLGQ + A ++ GE Sbjct: 702 FQNKLLLTETYRQLKEMDFNIYISEKVPLNDGGVSLGQAWLGAKKYKKGE 751 >UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Euryarchaeota RepID=B6YT84_THEON Length = 813 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 276/771 (35%), Positives = 409/771 (53%), Gaps = 49/771 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLREDPET----FLVQLYQH 64 +L ++G VQ VGFRPFV+++A + L G V N GD GVE+ + E PE FL+ L + Sbjct: 48 RLHVQGIVQAVGFRPFVYRIAHEHGLRGYVKNLGDAGVEIVV-EGPEKDIGAFLLDLREK 106 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 PPLA+I+ +++ + + S GG+ I+P D A C CL E+ P +R Sbjct: 107 LPPLAKIEKIKKREIPIQGFDRFYIEKSSQGGSGGDSIIPPDIAICEDCLRELFDPTNKR 166 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFI CT+CGPRFTII +PYDR T M FP+C C+ EY+DPL+RR+HA+PV CP Sbjct: 167 YMYPFIVCTNCGPRFTIIEDLPYDRVNTTMREFPMCDFCESEYKDPLNRRYHAEPVCCPV 226 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP ++ L+ A + G IVAIKGIGG HLACDA + VA LR R Sbjct: 227 CGPSYRLYTNDGEELIGDPLKKAAELIDNGYIVAIKGIGGIHLACDATREDVVAELRKRI 286 Query: 244 HRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 HRP KP A+M + + + A + L + PI+ + KK L +++AP L+ + Sbjct: 287 HRPQKPFAIMAKDVETIEEFAFISPEELEELKSYRRPIMTLRKKEPFPLPENLAPGLHTI 346 Query: 298 GVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP ++L + P+ VMTS N G P NE+A +L+ +AD FL+HNR I+ Sbjct: 347 GVMLPYAGTHYILFHYSKTPVYVMTSANYPGMPMVKDNERAFEELKDVADYFLLHNRKIL 406 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVVR ++RRSRG+VP + +P ++ L +GA+L N F + + + Sbjct: 407 NRADDSVVRFVNGRRAVIRRSRGFVPLPIEIPFDYRG----LAVGAELMNAFGVTKNGKI 462 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIY---DFTPQYVVHDAHPGYVSSQWAREM---- 466 SQ++G+ S + REA+ + I DF +V D HPGY +++ A EM Sbjct: 463 YPSQYIGNTSKVEVLEFMREAVEHFKRILRVRDF--DLIVADLHPGYNTTKLAMEMANEL 520 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 + V HH+AH A+ +AEH LD +++ + +DG+G G +G WGGE + ++Y + E Sbjct: 521 GVEFLQVQHHYAHIASIMAEHN--LD--EIVGIAVDGVGYGTDGHTWGGEVIYLSYEDVE 576 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRF--VPEWQNY--------SETASVQQQNWS 576 L + LPGGDLA+ P R L+ + + E + E+ + ++ Sbjct: 577 RLAHIDYYPLPGGDLASYYPLRALMGILSKVYGIEELEEVIEKCCPKAIESLRYGKVEFN 636 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 V+ + + +N ASS GR DA + L A YEGE A LE+ A Sbjct: 637 VVLTQLAKEVNTSYASSTGRVLDAFSVLLNVA-YRRHYEGEPAMKLESFAIRGKN-DLGF 694 Query: 637 TMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 ++P + + +QQ L A A++ H AL + FA + E+A G+ + SG Sbjct: 695 SVPVEGELIKVEELFQQALEINASPADVAYSVHLALGRAFAEIAVEKAKEFGVKNVGISG 754 Query: 697 GVIHNRLLRARLAHYLADFTLLFPQS--LPAGDGGLSLGQGVIAAARWLAG 745 GV N L+ + + L F + +P GD G+++GQ + +L G Sbjct: 755 GVAFNELIVKTVRKIVEANGLRFYSTYEVPRGDNGINVGQAFLGGL-YLEG 804 >UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBC6_ELUMP Length = 736 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 279/752 (37%), Positives = 396/752 (52%), Gaps = 52/752 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 ++ I G VQGVGFRPF+++ A + L G V N GV +E+ F++ + Q+CP Sbjct: 5 RILINGVVQGVGFRPFIYKSALKFRLSGFVQNTSAGVITEAQGSKENINKFILFIKQNCP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYR 125 P A+I+ ++ I + F I S + T +P D A C C E+ P +RR+ Sbjct: 65 PQAKIEDLKITD-IKEKKEKGFLIIASKKDNIQTVFLPPDLAMCKDCGKEILNPKDRRFL 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YP NCT+CGPR +I + +PYDR T M+ F +CPAC KEY P RRFHAQP ACP CG Sbjct: 124 YPLTNCTNCGPRLSITKTLPYDRKATTMSKFKMCPACQKEYESPNSRRFHAQPNACPVCG 183 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P + + ++ + AL+ A L GKI A+K IGG+HLACDA+N AV +LR K R Sbjct: 184 PQVFFKFKNKNFKGLKALKTAAVFLDKGKITAVKSIGGYHLACDAKNPKAVTSLRLSKKR 243 Query: 246 PAKPLAVM---LPVADGL----PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 P KPLA+M L A AR LL +PAAPIV+V KK +L D +LN G Sbjct: 244 PYKPLAIMFKDLKTAKKYCFINKIEARALL-SPAAPIVIVKKKKELKLISD---NLNNYG 299 Query: 299 VMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 +MLP PL +L L+ LVMTSGN G + +A L IADGFL H R+I Sbjct: 300 IMLPYTPLHKILFSLLKTDVLVMTSGNAKGGALCSGDGEAFKKLSKIADGFLYHEREIYN 359 Query: 358 RMDDSVVRES-GEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 ++DDS++ E+ G+M +RR+RG+ P L K +L LGAD FCLV+ +A Sbjct: 360 KVDDSIMFEALGKMRFIRRARGFAPLPATLAKKAKK--SILALGADKTAAFCLVKENKAY 417 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV- 473 LSQ++GDL+ + AL + + PQ + D HPGY +++ LP + V Sbjct: 418 LSQYIGDLNKKENGGFYLTALEKNKRLLGINPQVTIADLHPGYFTNK------LPFKNVN 471 Query: 474 --LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 HH AHA + AEH G +A+ LDG G+G +GA+WGGE L N + + Sbjct: 472 KIQHHAAHALSVAAEHNLK---GRFLAVNLDGSGLGSDGAIWGGEFLAFNNKNWKRAAYF 528 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLR-FVPEWQNYSET-ASVQQQNWSVLARAIERGINAP 589 + LP GD + + W L + + +W NY +V +Q + + + I+ GIN Sbjct: 529 EPLPLPAGDESVSEIWLLTLGAIKKIYGKDWTNYKYLFKNVPRQKFRLALKLIDNGINVY 588 Query: 590 LASSCGRFFDAVA-AALGCAPATLSYEGEAACALEALAASCHGVTHP--VTMPRVDNQLD 646 +SS GR FD V+ ALG T Y+ +AA LE A C + P V M + + Sbjct: 589 NSSSAGRVFDIVSHIALGITKTT--YQAQAAMELE---AKCLRLKSPYKVVMEKQNGCYI 643 Query: 647 LAT--FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 + T ++ L++ + + FH + ++ L E A + + SGGV N++L Sbjct: 644 IKTGEMLKEILSYSRSAEEISARFHAYMV--YSVL--ETAKKLKLKNICLSGGVFQNKVL 699 Query: 705 RARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 + L A F + + P DGGL+LGQ Sbjct: 700 LKGTVNVLKRAGFNVYLNEQTPCNDGGLALGQ 731 >UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyrus kandleri RepID=Q8TXL4_METKA Length = 762 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 300/766 (39%), Positives = 402/766 (52%), Gaps = 50/766 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++R+RG VQGVGFRPFV++L ++ L G V N G VE+ ++ ++ E + +L + P Sbjct: 5 KIRVRGIVQGVGFRPFVYRLCTEMELDGHVRNLGSEVEIVVKATCDELEELIRRLKEEHP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLAR+ V E P + + QI PDA C CL E+ P RRY Y Sbjct: 65 PLARVREVHAEETEEDVGPGFRIVESEESEDVELQIPPDAPVCEECLEEIFDPKSRRYLY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT+CGPRFTII +PYDR T M FPLC C +E+ DP DRR+HAQ V CP CGP Sbjct: 125 PFTGCTNCGPRFTIIEGIPYDRENTTMVDFPLCEECRREFEDPEDRRYHAQVVCCPRCGP 184 Query: 187 H---LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 L+ E+ A++ A ++ GKIVAIKGIGGFHLAC VA LR R Sbjct: 185 RYRLLDADGEVVEGEELEAIREACELIEEGKIVAIKGIGGFHLACKTTEDEPVAKLRERL 244 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP +P AVM D + A LLT P PIV++ KK L + +AP L+ V Sbjct: 245 GRPQQPFAVMSGSLDDVRTFAEVDGTAEDLLTGPVRPIVVLPKKEPFPLSELVAPGLHTV 304 Query: 298 GVMLPANPLQHLLLQEL--QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 GVMLP L H++ + + +VMTS N G+P AI N AL L+GIAD +L+H+R I Sbjct: 305 GVMLPYTGLHHIMFERFLDEPAIVMTSANPPGEPMAIRNSDALRHLRGIADYYLVHDRRI 364 Query: 356 VQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 R DDSVVR LRRSRGYVP+ + L ++ V+ +G +L T C++ + Sbjct: 365 AARCDDSVVRVLDGRPRSLRRSRGYVPEPIELEWAPDDL-TVVAVGPELDVTACVLHRGK 423 Query: 413 AVLSQHLGDLSD----DGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAR 464 A +QH+G+ S D +Q LRL++ ++ V D HP + ++ +WA Sbjct: 424 AYPTQHIGNTSRAQTLDFLQETVERFLRLLRLDWNDV-DAVACDLHPSFATTGLARRWAE 482 Query: 465 EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 E +L V HHHAHA ACLAEH IA +DG G G++G+ WGGE L V+ E Sbjct: 483 EHDLELVRVQHHHAHALACLAEHGLDPAEEPAIAAAMDGYGYGDDGSAWGGEILYVDGNE 542 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIER 584 E +G L V++PGGD A +P R A + E + + W + ER Sbjct: 543 YERIGHLEPVSMPGGDAATYRPLRMTAAHLHAAGWSEEEIREFLLRRLEEWPHALKHGER 602 Query: 585 GINAPL---------ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 + L +S GRF DAV+AALG +YEGE A LEA+A V H Sbjct: 603 EVEVILHQIEHPTIETTSAGRFLDAVSAALGVCHER-TYEGEPAMKLEAVAVR---VDH- 657 Query: 636 VTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAF--HDALAQGFAALMREQATMRGITTLV 693 P VD + + + + A +A H AL +GFA ++ E R + Sbjct: 658 APEPDVDVR-NGSVRVSSVVARAAETGDLRYALTAHHALIEGFAEVIDEH---RDGEPVA 713 Query: 694 FSGGVIHNRLL-RARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 +GGV +N L+ R Y AD LL +PAGDGG+SLGQ V A Sbjct: 714 ITGGVFNNELITRGFRELYGAD--LLEHHEVPAGDGGVSLGQVVAA 757 >UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Mycobacterium RepID=A1T7M3_MYCVP Length = 777 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 302/763 (39%), Positives = 410/763 (53%), Gaps = 52/763 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP----ETFLVQLYQH 64 V+L I G VQGVGFRP V ++A Q L G V ND V L E P + + L Sbjct: 3 VRLTITGVVQGVGFRPAVARIAAQNRLAGFVLNDARAVRCEL-EGPGPRVDAAVRTLRDG 61 Query: 65 CPPLARIDSVEREPFIWSQLP----TEFTIRQSTGGTMN---TQIVPDAATCPACLAEMN 117 PPLA +DS F+ P T F I ST N T + PD ATC CL E+ Sbjct: 62 PPPLACVDS-----FVTEMRPALGETVFRILDSTPSGDNGDRTLVSPDIATCADCLRELF 116 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RR+R+PFI CT+CGPR+T+I +PYDRP T MA F +CP+C EY DP DRR+HAQ Sbjct: 117 DPADRRHRHPFITCTNCGPRYTVITDVPYDRPTTTMAGFAMCPSCAAEYGDPADRRYHAQ 176 Query: 178 PVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 +ACPECGP L W G H A+++A A L+ G IVA+KG+GG+HLAC A + +AVA Sbjct: 177 TIACPECGPTLSWHGPGPHG---GAVESAAAALRAGLIVAVKGVGGYHLACRADDDDAVA 233 Query: 238 TLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR RK+RPAKP AVM + + DAA + LT+ AAPIVL+ + + +A Sbjct: 234 RLRRRKNRPAKPFAVMAADIEAARRICHVDDAAARSLTSAAAPIVLLPAR-AGAVSVHVA 292 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P+L ++GVML +P+ HLL E P LVMTS N G P + + L + G+AD L Sbjct: 293 PNLTDLGVMLAYSPVHHLLFAEPDMPALVMTSANQGGS-PIVFRDGDLDWIDGLADAVLT 351 Query: 351 HNRDIVQRMDDSVVR---ESGEM-LRRSRGYVPDALALPPGFKNVPP-------VLCLGA 399 H+R I +DSVV + E+ LRRSRGY P +++ G + +L G Sbjct: 352 HDRPIHVPCEDSVVSIDDDGNEVPLRRSRGYAPLPVSVGAGAGDGDGDGDDPAVILATGG 411 Query: 400 DLKNTFCLV-RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 D+K TF L R +A LS HLGD++D Q + A+ + + P + HD HP Y Sbjct: 412 DIKTTFALTGRYGRAHLSSHLGDMADPRTQACFAAAVDHLGFLTGSAPTVLAHDLHPQYA 471 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 +++WA+ V HHHAHA + LAEH+ G +IA+T DG G G +G +WGGE L Sbjct: 472 TTRWAQRRGERLLAVQHHHAHAVSLLAEHRRL--GEPIIAVTYDGTGFGTDGTIWGGELL 529 Query: 519 RV-NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQNWS 576 V + +G L ALPGG+ A +QP R L R + + A++ Sbjct: 530 AVRDPARFTRVGHLAPFALPGGEGAVRQPARIALDLLDRAGIEASDDLPPVAALGAAGLH 589 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC---HGVT 633 +L + + RG+ +S GR FDAV++ LG + YEG+AA LE A + V Sbjct: 590 ILTQQLRRGVGCVPTTSMGRLFDAVSSLLGVC-QQVGYEGQAAIELEHRARAGRPWRAVD 648 Query: 634 HPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 VT +D + T + P A AFHDA+ + + A G++T+ Sbjct: 649 FEVTAGVLDPA-PVITALVDGVRRGVPSADLAMAFHDAVVRATVRAAGDAAVAAGVSTIG 707 Query: 694 FSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 +GGV NR L A +AH L +L + +P DGGL+LGQ Sbjct: 708 LTGGVFANRRLLAGIAHGLRVRGLEVLTHRVVPCNDGGLALGQ 750 >UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Coriobacteriaceae RepID=C7MLP5_CRYCD Length = 848 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 303/848 (35%), Positives = 408/848 (48%), Gaps = 126/848 (14%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 + + + G VQGVGFRPFV++LA++ +L G V N DGV + + D + F + + Sbjct: 4 ALNIHVTGIVQGVGFRPFVYRLARKHHLCGWVLNGVDGVRIHAEGSQSDLDHFALAIADE 63 Query: 65 CPPLARIDSVEREPFIWSQLPT-EFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 P A+++ V +P T E T T T + PD ATC CL E+ P +RR Sbjct: 64 APAAAKVERVLLDPASVESFETFEIRFSDDTDTTSTTLVSPDLATCDDCLYELFDPADRR 123 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YPFINCT+CGPRFTI R +PYDR T M F +CP C EY DP DRRFHAQP AC E Sbjct: 124 FHYPFINCTNCGPRFTITRELPYDRANTSMGPFKMCPDCAAEYADPADRRFHAQPDACFE 183 Query: 184 CGPHLE-WVS-------HGEHAEQE--------------------------AALQAAIAQ 209 CGPH+ WVS G A QE A + A IA Sbjct: 184 CGPHISWWVSPSATDRVAGMLANQESWASDASDWAPTYDQRKIGRNQVQSDAIIAACIAV 243 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDA 263 L G IVAIKG+GGFHLACDA N A+A LR RK RP KPLA M+ D Sbjct: 244 LTAGGIVAIKGLGGFHLACDATNEQAIAELRRRKRRPGKPLACMVATLDKARALCQTTQE 303 Query: 264 ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSG 323 LL++PA PIVL+ K+ ++ L+E+G+MLPA PLQHL+L+ LVMTSG Sbjct: 304 EEALLSSPARPIVLLRKRSDVSFATGLSDGLSEMGLMLPATPLQHLILRAFGGMLVMTSG 363 Query: 324 NLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG--------EMLRRSR 375 N+ +P + +A L +AD F+ ++R I++R DDSVVR + +M+RR+R Sbjct: 364 NVHDEPIQTDDARAAHVLADVADAFVGNDRPILERYDDSVVRVAFIDADDSIVQMIRRAR 423 Query: 376 GYVPDALALPPGFKNVPP--VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWRE 433 G+ P + LP K+ P V G + KNT L R +A +SQH+GD+ + W E Sbjct: 424 GFAPQPVPLP---KDTPDECVFATGPEQKNTLALTRPGEAFVSQHIGDMENAQTNDAWLE 480 Query: 434 ALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDG 493 A + ++ TP V+ D HP Y++S+WA +LP V HHHAH A+ LAE+ Sbjct: 481 AAAAFKRLFHLTPSRVICDMHPEYLTSKWALAQDLPVVRVQHHHAHIASVLAENALE--- 537 Query: 494 GDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ 553 G + DG G G +GA+WGGE L + E LP G A P R Sbjct: 538 GPALGFAFDGTGYGVDGAIWGGEVLLADLSSFERFANFSYFPLPSGAGAITHPPRCAYGV 597 Query: 554 CLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG-CAPAT 611 F + + + S + + A+ I+RG+N P SS GR FDA +A LG C A Sbjct: 598 LWAFDLLDHPGAASALSALGETADLCAQMIDRGVNCPQTSSVGRLFDAASALLGLCTEA- 656 Query: 612 LSYEGEAACALEA-----------------LAASC------------------------- 629 YEGE AC LEA A++C Sbjct: 657 -RYEGEGACLLEAAIDYSADDAVVDSVVRRAASNCDTPDLDSAHANAVVNSAVDSTAEAD 715 Query: 630 -HGVTHPVTMPRVDNQ--------------LDLATFWQQWLN---WQAPVNQRAWAFHDA 671 +TH + V N LD A ++ L+ Q A FHDA Sbjct: 716 KSAITHRYRVDIVKNAATEQSTAQDTAVLLLDAAPLFRALLDDKQAQVATGVIARRFHDA 775 Query: 672 LAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGG 729 + + + + + G+ SGGV NR L + L A + + + LP DG Sbjct: 776 IVRAIVQMAQLGEALYGVRQTALSGGVFMNRYLLEQTVSALSAAGYAVALNRDLPPNDGC 835 Query: 730 LSLGQGVI 737 +S GQ V+ Sbjct: 836 ISYGQAVV 843 >UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PDU4_VIBFU Length = 766 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 294/776 (37%), Positives = 404/776 (52%), Gaps = 76/776 (9%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPP 67 + I+G+VQGVGFRPFV++LA + L G V ND GV + ++ + + F +L PP Sbjct: 6 IEIKGQVQGVGFRPFVYRLAIEHQLKGWVINDARGVRIDVQGEQRQFDAFYRELLIQTPP 65 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQ----STGGTMNTQIVPDAATCPACLAEMNTPGERR 123 LAR+D+V P PT+F Q S ++ + PD A C C E+ P R Sbjct: 66 LARVDNVALRPLD----PTDFAAFQILSSSDDAEISVSVPPDQAICMDCRRELFDPNSRF 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCT+CGPRFTII+A+PYDR T MA F LCPAC + Y++P+DRR+HAQPV+C Sbjct: 122 YHYPFINCTNCGPRFTIIKALPYDRHQTSMADFKLCPACARAYQNPMDRRYHAQPVSCAH 181 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + +S + A+ AA++ A QL G ++A+KG+GGFHL CDA + AVA LR Sbjct: 182 CGPSVTLLSPQQTCIAKAHAAIERAAEQLIAGGVIALKGLGGFHLVCDATSLQAVARLRE 241 Query: 242 RKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPE-----LCDDI 290 KHR KPLAVM+ + Q L + A+PIVL+ K + + D++ Sbjct: 242 LKHRARKPLAVMVSDVAQAKHYVQGEALEWQTLKSQASPIVLMHKAEHTDAGRAPVADNV 301 Query: 291 APDLNEVGVMLPANPLQHLLLQELQ-----CPLVMTSGNLSGKPPAISNEQALADLQGIA 345 APD++ +GVML PL LL+ LQ PLVMTS N+SG P A +Q A Sbjct: 302 APDVDCLGVMLAYTPLHLLLIDALQQRGCFAPLVMTSANVSGLPLATEAQQVFAMFGASL 361 Query: 346 DGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L HNR IV DDS+V+ S +LR +RGY P + P P L +GA K Sbjct: 362 DSVLDHNRPIVHACDDSLVQLAAGSMRVLRMARGYAPLSF---PLANRAPATLAVGAQQK 418 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 +T Q LS +LGDL+D Q ++ +A ++Y + + V DAHPGY S+QW Sbjct: 419 STVAFAVRNQWFLSPYLGDLTDLDTQQRFVDATHYFPHLYQASTERWVADAHPGYFSTQW 478 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL---R 519 E V HH+AH + +AE Q G V+ ++ DG G G++G +WGGE + R Sbjct: 479 VNEQTSSALHVQHHYAHILSVMAESQL---NGPVLGVSFDGTGAGDDGTVWGGEVMIADR 535 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF----------VPEWQNYSETAS 569 + Y+ HL L GG+ A ++P R L A L +P + +S++ Sbjct: 536 LGYQRIAHLRPF---RLIGGEQAIREPERVLYALLLELMTPAEIQQLHLPAFAAWSDS-- 590 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 + QN L R ER +PL SS GR FDA A LG T YEGE+ +E A Sbjct: 591 -RFQNLFHLWRNAER---SPLCSSVGRLFDAWACLLGFV-TTPDYEGESGLQMENAARQA 645 Query: 630 HGVTHPVTMPRVDNQLDLATFWQQWLNW---QAPVNQRAW------AFHDALAQGFAALM 680 +++P D QLD A QQ L ++ + W AF ALA+ + Sbjct: 646 GEHQVALSLPWRDQQLDWAPALQQSLERGLASDDISAKRWACVCSDAFIGALAKAVIDIA 705 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLF--PQSLPAGDGGLSLGQ 734 ++ A + LV SGGV NR L + D F +P D G++ GQ Sbjct: 706 QQHANL----PLVLSGGVFQNRCLLDAIDAMYPDSACPFITGSHIPVNDSGIAAGQ 757 >UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT71_ACIBL Length = 740 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 303/755 (40%), Positives = 401/755 (53%), Gaps = 53/755 (7%) Query: 17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDP--ETFLVQLYQHCPPLARIDS 73 VQGVGFRPFV++LAQ +L G V N GVE+ L +P E F+ +L PP A I Sbjct: 2 VQGVGFRPFVYRLAQTHHLAGWVRNGEQGVEIFLEGAEPSVERFVEELETEAPPAASISQ 61 Query: 74 VEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERRYRYPFINCT 132 VE +P +F IR+S T ++ PD C CL E+ P +RRY YP+INCT Sbjct: 62 VEVDPAKPEGF-LDFAIRESERIDRPTVRVSPDLPVCDECLRELFDPADRRYLYPYINCT 120 Query: 133 HCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVS 192 +CGPR+T++ +PYDRP T M +PL C EY DP +RRFHAQPVAC ECGP Sbjct: 121 NCGPRYTVVLGLPYDRPKTTMKDWPLDAYCRGEYGDPANRRFHAQPVACAECGPTYFLQI 180 Query: 193 HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAV 252 E AA++ L+ GKI+A+KG+GG+HLACDARN NAV LR RK+R KP AV Sbjct: 181 GDERIFGAAAIERTAEILRDGKILAVKGLGGYHLACDARNGNAVRALRERKYRKEKPFAV 240 Query: 253 MLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 M + L + R+LLT A PIVL K + +AP+ +E+GVMLP PL Sbjct: 241 MARDVEIAAQIVELSNETRELLTGIARPIVLARAK---QQFPGVAPENHELGVMLPYTPL 297 Query: 307 QHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 HLL P LVMTS N S +P A + A+ L GIAD FLI +R I +R+DDSV Sbjct: 298 HHLLFAS-GAPEVLVMTSANRSSEPIAYEDADAIESLVGIADAFLIGDRPIARRVDDSVA 356 Query: 365 RESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGD 421 R +LRR+RGY P A+A P + P+L LGADLKN LV QA +SQH+GD Sbjct: 357 RVGAYGPAILRRARGYAPGAVATIPCER---PILALGADLKNALTLVVDGQAFVSQHIGD 413 Query: 422 LSDDGIQMQWREALRLMQNIYDFTPQYV--VHDAHPGYVSSQWAREMNLPTQT-VLHHHA 478 L + E +R + +Y+ V VHDAHP Y ++ A ++ + V HH A Sbjct: 414 LEHYTAFQAFEETIRDLLAMYEVKMDEVLLVHDAHPQYRTTLHAAQIAAKKKVAVQHHRA 473 Query: 479 HAAACLAEH-QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE-CEHLGGLPAVAL 536 H A+ LAE +W V+ ++ DG G G++G +WGGE + E E + L L Sbjct: 474 HIASVLAERGEW---NRCVVGVSFDGTGWGDDGTVWGGEIFAGSVHEGFERVAHLRPAVL 530 Query: 537 PGGDLAAKQPWR---NLLAQCLRFVPEW----QNYSETASVQQQNWSVLARAIERGINAP 589 PGGD AA+ P + LAQ L +P+ N+ E ++ + + + Sbjct: 531 PGGDAAAEFPVQAAAGFLAQ-LGDLPDLCAAPFNFPERFRAARE-------LVTKNVRCF 582 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA---ASCHGVTHPVTMPRVDNQLD 646 +S GR FD AA +G T +YEG+AA +E LA A G P T +D + Sbjct: 583 GTTSMGRLFDTAAALIGFTRET-TYEGQAAIWVEQLARRTAHRDGFEFPYTDGELDFRPL 641 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 L Q L A + A F +A G + +R +G T+V SGGV N LL Sbjct: 642 LTAVIQSRLTGVA-LETIARRFQVGVAHGISECLRTICKEQGAKTVVLSGGVFQNELLLG 700 Query: 707 RLAHYLADFTLLF--PQSLPAGDGGLSLGQGVIAA 739 L L L + +P DGG+SLGQ +AA Sbjct: 701 DLKPQLDVLGLEVWTNRMVPTNDGGISLGQAAMAA 735 >UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=Campylobacterales RepID=A8EUQ4_ARCB4 Length = 749 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/751 (32%), Positives = 383/751 (50%), Gaps = 39/751 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETFLVQLYQHCP 66 ++ I G VQGVGFRPF++ LA + ++ G V ND +GVE+ +E+ E F+ ++ + P Sbjct: 6 KISIFGIVQGVGFRPFIYNLAIKYDIKGWVKNDENGVEIEAYSTQENIENFINEIKSNPP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGERRYR 125 LA+I +++ E + F I QS+ T I+ PD A C C+ ++N G RY Sbjct: 66 VLAKITNIKIEKNNQIKEYKNFEIIQSSSSKDKTTIISPDIAICDDCIKDVNDIGNFRYN 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y NCT+CGPR++II+ +PYDR T M F LC C+ EY++PL+RR+HAQPVAC +CG Sbjct: 126 YSLTNCTNCGPRYSIIKTVPYDRANTSMNEFKLCKKCEDEYKNPLNRRYHAQPVACEDCG 185 Query: 186 PHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P++ +++ + A++ +K G ++A+KGIGGFH+ CDA N V LR K Sbjct: 186 PNMTLYNINNSILSYNIKAIEQTANLIKDGYVIAVKGIGGFHIVCDATNDKVVNKLREIK 245 Query: 244 HRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 +RP KP AVM + + ++LT+ PIVLV K+ L IAP+++++ Sbjct: 246 NRPNKPFAVMFNNINSIKQYTNMNYQEEEILTSKEKPIVLVKKRPNTNLSSYIAPNISKL 305 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G + + HLL + LQ P+V TS NL +P S ++ + L I D L +NRDIV Sbjct: 306 GCFIANCGIHHLLFKYLQNPIVATSANLKDEPIIRSKDEIIGKLGNIVDFVLDYNRDIVN 365 Query: 358 RMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 DDS+++ LR +RGY P + + KN VLCLGA+ K+T L + Sbjct: 366 SSDDSIIQNVENYKIKLRNARGYAPTHIKIEKDLKN--KVLCLGANQKSTIALGFKNNFI 423 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-----NLP 469 LS ++GDL+ + + +N YDF P VV D HP Y S+++A ++ N+ Sbjct: 424 LSPYIGDLNSISSMEYFNRTINSFKNFYDFVPDTVVCDLHPKYESTKYAFKLLQDNPNIK 483 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AH + +AE+ +V+ DG G G++G +WGGE + +E + + Sbjct: 484 LIQVQHHYAHILSVMAENGLE---DEVLGFAFDGTGYGDDGNIWGGEVFIASRKEYKRIN 540 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASV----QQQNWSVLARAIERG 585 + L GG++A K+P R L+ + + + V ++ L ++G Sbjct: 541 HIKYFRLLGGEMAIKEPKRVALSLLFDIFTLDEILALDSFVVKAFSKEEIKTLYTMWQKG 600 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +NAP SS GR FDA+ ++ T ++EGE +E + + +D + Sbjct: 601 LNAPFCSSIGRLFDAI-SSFANILHTQTFEGETGLLIE--ENYDNSIKDNYEYKILDENI 657 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D+ Q + ++ ++ E + +VFSGGV N+ L Sbjct: 658 DITPMISQIIE-----DKDKKVISSKFINTLVNIIIEISNKDKNLPVVFSGGVFQNKTLL 712 Query: 706 ARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 L + F +P D G+S+GQ Sbjct: 713 ELLIKKFKEQGRVFYFNIDVPTNDEGISIGQ 743 >UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3I5_LISDA Length = 786 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 287/790 (36%), Positives = 409/790 (51%), Gaps = 84/790 (10%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPP 67 + + G VQGVGFRPFV+QLA + L G V ND +GV++ + E F+ QL + PP Sbjct: 7 IHVTGIVQGVGFRPFVYQLALEYQLLGWVINDSEGVKIDAQGTVEQLTQFVEQLERQAPP 66 Query: 68 LARIDSVEREPF-IWS--QLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERR 123 L+RID +E W+ Q PTEF I++S + + I PD C ACLA++ P R Sbjct: 67 LSRIDHIEITVLPSWNKAQCPTEFAIQESCERESTSVSISPDQGVCQACLADLEDPRSRY 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NCTHCGPR++II+A+PYDR T MA F C C++ Y++PLDRR+HAQP++C Sbjct: 127 YHYPFTNCTHCGPRYSIIKALPYDRCHTSMANFQFCQPCEQAYKNPLDRRYHAQPISCEH 186 Query: 184 CGPHLEWVSHGEHAEQ---EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + W H E A+++ Q+ G +VA+KG+GGFHL CDA ++ AV LR Sbjct: 187 CGPWVSWHQHSTAETDSVGEQAIESLAKQILAGGVVALKGLGGFHLICDASDNVAVERLR 246 Query: 241 ARKHRPAKPLAVMLP-------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 KHRP KPLA+M+ A G D Q L PIVL+ K L ++AP+ Sbjct: 247 QYKHRPKKPLAIMVQSLSDARVFAQGC-DKEWQTLDEQKRPIVLLKKNRESILAPNLAPN 305 Query: 294 LNEVGVMLPANPLQHLLLQEL-----QCP--LVMTSGNLSGKPPAISNEQALADLQGIAD 346 + +G+MLP PL LL +L P LVMTS N SG P A E+ +A D Sbjct: 306 VPYLGIMLPYTPLHFLLFAKLAELKPHTPHALVMTSANRSGLPIATCFEEVIAQFGTELD 365 Query: 347 GFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNV--PPVLCLGADL 401 G L HNR I+ DDS V+ + +LR +RGY P + F + L +GA Sbjct: 366 GILNHNRPILHACDDSLVHVIDDKVHVLRMARGYAPFS-----RFADTHNQATLAMGAQQ 420 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K + L +Q +LS +GDL + +M+++EA++ ++Y +PQ +V D HPGY S++ Sbjct: 421 KASIGLALPQQWMLSPFIGDLDNVDNEMRYQEAIKTFTSLYHVSPQRIVCDYHPGYRSTE 480 Query: 462 WAREM-----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE 516 A+ M ++ + HHHAH A +AEH V+ T DG G GE+ +WGGE Sbjct: 481 LAQRMVTDDSSISLTQIQHHHAHVLAVMAEHNLT---EQVLGFTFDGTGYGEDETVWGGE 537 Query: 517 CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ--- 573 L + + + L + L GG+ A K+P R LLA L F+ + + S+Q++ Sbjct: 538 VLLADTHNFKRVASLRSFRLLGGEQAIKEPARLLLAILLEFM----SIEQVCSLQEKLFP 593 Query: 574 NWSV-----LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-A 627 W+ L + + G +P SS GR DA+A LG +SYEGEA LE A Sbjct: 594 QWTSATLENLYQLWQSGSRSPYTSSMGRLIDAMAYLLGVL-ERVSYEGEAGLLLEQAALN 652 Query: 628 SCHGVTHP---VTMPRVDNQLDLATF-WQQWLNW-----------QAPVNQRAWAFHDAL 672 S + + +P +++ ++ Q D WQ Q N+ A AF + Sbjct: 653 SQYELLYPLPELSLVSLNAQSDFTVIDWQPCFESVLSCRLSVAFNQMLQNRLAHAFLRNI 712 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHNRLL--------RARLAHYLADFTLLFPQSLP 724 AQ L + LV SGGV NR++ AR + + + +P Sbjct: 713 AQSIFTLAENYPAL----PLVLSGGVFQNRIILQSAYTLASARDSALQQKQPIYSGELIP 768 Query: 725 AGDGGLSLGQ 734 DGG++ GQ Sbjct: 769 VNDGGIAAGQ 778 >UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM01_9BACT Length = 745 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 271/752 (36%), Positives = 389/752 (51%), Gaps = 50/752 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 ++++G VQGVGFRPF+++LA L G V N GVE+ + ++ E F + CP Sbjct: 5 NIKVKGIVQGVGFRPFIFRLAGTHGLKGFVTNSSSGVEIEVNGEKQQIEDFASDIQTKCP 64 Query: 67 PLARIDSVERE--PFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PLA I V E PF ++ F+I S + T + PD A C C EM+ P +RRY Sbjct: 65 PLAHIIEVTIECIPFREFEM---FSIEPSKITSGITLVPPDTALCDECAKEMDDPADRRY 121 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPF NCT+CGPR++II+ MPYDRP T M+ F +CP+C KEY DP DRRFHAQP ACP C Sbjct: 122 NYPFTNCTNCGPRYSIIKKMPYDRPDTTMSKFRMCPSCQKEYDDPADRRFHAQPNACPVC 181 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 GP V G++A Q+A AA + G I+A+KG+GG+HL CDA V TLR K Sbjct: 182 GP---MVYLGKNAGQDAIDHAA-EIIDSGGIIAVKGLGGYHLICDATQDIPVKTLRNLKK 237 Query: 245 RPAKPLAVMLP---VADGLPDA-ARQLLTTPAAPIVLVDKKYVP--ELCDDIAPDLNEVG 298 RP KPLAVM + DA + +L +P APIV++ +P + ++P+ VG Sbjct: 238 RPDKPLAVMCSYETIQKYCDDAPSLKLFCSPQAPIVIMKVPDLPVSAFANPMSPN---VG 294 Query: 299 VMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 + P PL +L++ + L+ TSGN +P A +A L FL H R I Sbjct: 295 CIAPYTPLHRVLMKTCKSDFLIATSGNRKDEPIAKDEREAEKALSEFTSHFLHHTRPIHN 354 Query: 358 RMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R+DDS+V M +RR+RG+ P + LP VL LGA LKNT + + A Sbjct: 355 RVDDSLVSVVDGMPYVMRRARGFAPYPVMLPSAVNGC--VLALGAHLKNTITIAKDNYAF 412 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 +SQ++GDL + + E + M+ +Y P VV D HP Y S+ +A + LP Q V Sbjct: 413 VSQYIGDLDNPDTCEFFEETIDKMKMLYGLEPDSVVCDMHPNYHSTGFAESLGLPVQRVQ 472 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH +H AC+AE+ +V+ + LDG G+G +G +WGGE L + R+ LP V Sbjct: 473 HHISHMMACMAENGL---KDNVLGVVLDGTGLGTDGTIWGGEFLLMKNRKISRPQHLPKV 529 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS----VQQQNWSVLARAIERGINAPL 590 PG D AK P R L++ F + Y ET + + +++ + IE+ IN Sbjct: 530 MQPGMDGGAKNPGRMLISYLHHF-GILERYMETLTKKLFIPEKDIKLTVSMIEKNINCIP 588 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 +S GR F+++ AA+ L +E +A +E LA S H VT D F Sbjct: 589 TTSAGRLFESLGAAVTGVTKNL-FEAHSAMKMEGLAHSADRKYHKVT------DTDSDDF 641 Query: 651 WQQWLNW-----QAPVNQRAWA--FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 ++ + QA N + A H + ++ + + +V SGGV N Sbjct: 642 YRNVFEYTLNSVQANENPQIIAADIHSNFVKHIIFCIKNICNIEEVGDVVLSGGVFQNLF 701 Query: 704 LRARLAHYLADFTLLFPQSLPAGDGGLSLGQG 735 L L ++ + +++P D +SLGQ Sbjct: 702 LTKELTK-VSRLNIHRHKAVPPNDSCISLGQA 732 >UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Photobacterium RepID=Q1ZUD0_PHOAS Length = 796 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 294/795 (36%), Positives = 407/795 (51%), Gaps = 87/795 (10%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPP 67 + I G VQGVGFRPFV+QLA Q L G V ND +GV++ ++ +T F QL PP Sbjct: 10 IHITGIVQGVGFRPFVYQLATQHALVGSVINDSEGVKIDVQGSLDTLTIFTSQLIDQAPP 69 Query: 68 LARIDSVE-REPFIWSQL--PTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERR 123 L+RID V R +WS+L P F I QS T I PD C AC +++ P R Sbjct: 70 LSRIDDVAIRTLSLWSELEKPNTFGIEQSQCRESTTVSISPDQGLCDACKRDISNPDSRY 129 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 ++Y F NCTHCGPR++II+A+PYDR T M F LCP C + Y++P+DRR+HAQP++C Sbjct: 130 FQYSFTNCTHCGPRYSIIKALPYDRAVTSMQDFLLCPDCAEAYQNPVDRRYHAQPISCDC 189 Query: 184 CGPHLEWVSHGEHAEQEAAL------QAAIAQL----KMGKIVAIKGIGGFHLACDARNS 233 CGP + + + A L Q AI QL K G+IVA+KGIGGFHLACDA N+ Sbjct: 190 CGPWVTLYDAQQRVKSSAELPLVATKQTAIEQLAQKIKDGEIVAVKGIGGFHLACDATNA 249 Query: 234 NAVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKK--YVPE 285 AVA+LR K+R +KPLA+M D DA + L A PIVL++K+ V E Sbjct: 250 QAVASLRKLKYRQSKPLAIMAASDDIAQQFVEGCDAEWKALAAQARPIVLMNKRLDIVAE 309 Query: 286 --------LCDDIAPDLNEVGVMLPANPLQHLLLQELQC-----PLVMTSGNLSGKPPAI 332 L +++AP++ +G+MLP PL +LL EL+ LVMTS NLSG P A Sbjct: 310 EVTRTGGVLAENVAPNVPYLGIMLPYTPLHYLLFDELKAIGATSTLVMTSANLSGMPIAT 369 Query: 333 SNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFK 389 Q G G L HNR IV DDS+V +G +LR +RGY P + + + Sbjct: 370 ELAQVCTQFSGKISGILDHNRPIVSACDDSLVHYAGGKIRVLRMARGYAPVSHFVTGSKQ 429 Query: 390 NVPPV-LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQY 448 + + L LGA+ K+T L +Q ++S ++GDL D +++++E + +Y+ PQ Sbjct: 430 STGNITLALGAEQKSTIGLALPQQWLISPYIGDLDDLDTELRYQETFNHLTTLYNVKPQQ 489 Query: 449 VVHDAHPGYVSSQWAREMN------LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 +V D HP Y SSQ+A + P V HHHAH A +AEH V+ T D Sbjct: 490 LVCDKHPNYHSSQFAEKYQAKAHLITPLLKVQHHHAHVLAVMAEHNLT---EQVLGFTFD 546 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP--- 559 G G G++ +WGGE L + + +G L L GG+ A K+P R L A L Sbjct: 547 GTGWGDDHTVWGGEVLLSTPQSYQRVGHLRQFRLIGGEKAIKEPARLLFALLLECYSVDA 606 Query: 560 ----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYE 615 + + E + V N L + G +P SS GR DA + LG + YE Sbjct: 607 IKAMQLSAFKEWSDVYFNN---LYQLWLTGSQSPYTSSMGRLIDAWTSLLGLVD-RVDYE 662 Query: 616 GEAACALE--ALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPV-----NQRAWAF 668 GE LE A+ CH P++ N + WQ + P+ + A+ Sbjct: 663 GECGLKLEQAAMKDRCH---QPISFAVDANGV---IDWQPLFEYALPLLSLVADDYRPAW 716 Query: 669 HDALAQGFAALMREQATMRGITT----LVFSGGVIHNRLLRARL-----AHYLADFTLLF 719 + LA F + + + G T +V GGV NR+L + AH L +L Sbjct: 717 RNCLAHSFISAIADVIVTIGQTYKPLPIVLGGGVFQNRVLVDEVFEKASAHSL---SLFC 773 Query: 720 PQSLPAGDGGLSLGQ 734 ++LPA D +S GQ Sbjct: 774 GEALPANDASISAGQ 788 >UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAU9_SULNB Length = 740 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 276/754 (36%), Positives = 385/754 (51%), Gaps = 53/754 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 ++ I G VQGVGFRPF++ LA + NL G V N GVE+ + D + FL + P Sbjct: 5 KIEIEGTVQGVGFRPFIYSLAARFNLKGSVLNGTQGVEIVINATSADLDNFLQAIKNELP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA ID + Q I GG +I PD + C AC E+ P +RRY Y Sbjct: 65 PLASIDHIRTTELPLEQFQDFQIIATEDGGEKTVRIPPDVSICKACEKELFDPTDRRYGY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI CTHCG R++II +PYDR T M F +C C KEY DPLDRR+HAQP+ C +CGP Sbjct: 125 PFITCTHCGVRYSIIYDLPYDRKNTSMKFFEMCEMCTKEYNDPLDRRYHAQPIGCYQCGP 184 Query: 187 HLEWVSHGEHA---EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 L + + A ++ + A L G I+A+KG+GG+HL CDA N AVA LR RK Sbjct: 185 GLSLLDNQCSALSVKRSEIIDMASQLLLDGNILAVKGVGGYHLMCDATNEEAVAKLRERK 244 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP+KP AVM+ D + LL + PIVL++ K L +AP+++ + Sbjct: 245 RRPSKPFAVMVKNMDMAHQLAVISSKEEALLESKERPIVLLNAKR-QTLNAHVAPNISRI 303 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G+ LP PL LLL L PLV TS N++ + P ++ ++L L + D L HNR IV Sbjct: 304 GLFLPYTPLHLLLLHTLNRPLVATSANVTDE-PICTDRESLEKLSDVYDYVLDHNRKIVN 362 Query: 358 RMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 DDS VVRE LRR+RGY P ++ LP FK VL +GA+ K+T + +Q + Sbjct: 363 GCDDSVVMVVREQKVTLRRARGYAPSSVKLP--FKLSKRVLSMGANQKSTVAIGFDDQVI 420 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT-- 472 LS H+GDL G +++ + ++ IY F P+ +VHD HP Y S++ A ++ T Sbjct: 421 LSPHIGDLDSIGSVEYYKKNIGTLERIYGFEPEVIVHDKHPQYESTKVALSLSAQRSTLN 480 Query: 473 ---VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AH +AE G V+ + DG G G++G LWGGE L +Y E + Sbjct: 481 AVAVQHHYAHILGVMAEKGIE---GKVLGVAFDGTGYGDDGNLWGGEFLVCDYEGYERVA 537 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ---------NWSVLAR 580 L L GG A K+P R L+ ++ Y + A Q Sbjct: 538 HLNYFKLLGGAKAIKEPRRMALSLL------FELYGKEALALQHPVLDAFSPSELRTYYI 591 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 A E+G+N PL+SS GR FDAV A+L +S+EGE+ LE L +P Sbjct: 592 AWEKGLNGPLSSSAGRLFDAV-ASLTDVCHVMSFEGESGMLLEELYDGSVEGYYPFGYD- 649 Query: 641 VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 D ++D+ ++ + + FH L + + + LV SGGV Sbjct: 650 -DGRIDILPMIKEIVKESDRTVAVSKFFH-TLVEIIMTIHKAFG-----LPLVLSGGVFQ 702 Query: 701 NRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 NR+L + + D + F P DGG++LGQ Sbjct: 703 NRILLNLMMERVPD--IYFLNRFPPNDGGIALGQ 734 >UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZMU3_9FIRM Length = 802 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 281/798 (35%), Positives = 391/798 (48%), Gaps = 75/798 (9%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 Q+R+ G VQGVGFRP V + A +HG+VCN G VE+ + E F+ + P Sbjct: 8 QIRVYGIVQGVGFRPTVSRHAAARGIHGNVCNKGPYVEIYAQGPEEAVSGFISDIENRPP 67 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 A I + E S+ T+F I +S + PD A C C EM P RRY + Sbjct: 68 KRAAILKINVENIENSERYTQFDIIESEKTKGEIFVSPDIAICEECKEEMFDPKNRRYLH 127 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT CGPR TI+ ++PYDR T M FP+CP C KEY P RR+ AQPV C ECGP Sbjct: 128 PFINCTCCGPRLTILDSLPYDRERTSMKEFPMCPDCAKEYNAPATRRYDAQPVCCNECGP 187 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + + E + A+ A + G IVAIKGIGGFHL CDA N AV LR K RP Sbjct: 188 EVYLIGREERGRE--AITYARKTIAGGGIVAIKGIGGFHLCCDASNETAVRKLRQLKRRP 245 Query: 247 AKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPE-LCDDIAPDLNEVGV 299 KP AVM + + ++L PI+L+DKK + LC +AP +VGV Sbjct: 246 MKPFAVMAKNLEAVRKECEVSAEQTRILDGHQKPILLLDKKKEAKILCPSVAPGNPKVGV 305 Query: 300 MLPANPLQHLLLQ-----ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 MLP P+Q L+ E+ LVMTSGN SG P +++A A+L G D L H+R Sbjct: 306 MLPYAPVQLLIFTYDDGIEMPEFLVMTSGNTSGAPICRDDQEAEAELSGFCDCMLSHDRK 365 Query: 355 IVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I R DDSV+ + M+RRSRGY P + ++ VL +G +LKN+FC+ Sbjct: 366 IRIRADDSVMDFYEDRPYMIRRSRGYAPLPFMVSTPYRG--QVLAIGGELKNSFCIGVDN 423 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 + S ++GDL D RE + M+ + + P+ V D HP Y S A E+ LP Sbjct: 424 RFYPSPYVGDLEDLRTVKALRETVGRMETLLEVEPEIVCCDMHPKYNSVMVAEELGLPVV 483 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HH+AH +C+AE+ VI ++ DG G G +G +WGGE L + +G + Sbjct: 484 KVQHHYAHILSCMAENDC---AEQVIGVSFDGTGYGTDGTIWGGEILLSDLDGFTRVGSV 540 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS----VQQQNWSVLARAIERGIN 587 GGD ++K+ WR ++ + + +E +Q +V +R IN Sbjct: 541 MPFLQVGGDASSKEGWRIAVSLIYGMTGDRKKAAEITEKLELCTKQEANVQFTMADRKIN 600 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--------------------- 626 A +++S GR FD V+A LG + ++EGEA+ ALE A Sbjct: 601 AVISTSAGRLFDGVSAMLGIRRKS-TFEGEASMALEFAAEEYRETMLEKSKQQIQETEKY 659 Query: 627 ----------ASCHGVTHPVTMPRVDNQ---------LDLATFWQQWLNWQ---APVNQR 664 + ++ + R+D++ L+ + ++ LN Q + Sbjct: 660 GYDKEDTDTLSRNENLSETEEIKRMDDKLISAGDRLLLNTESLIKEILNRQLNGEDPGKL 719 Query: 665 AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQS 722 A+ FH LA A + + G SGGV NRLL H L + F +L Q Sbjct: 720 AYFFHRELACQITAACVKIRELSGCNKAALSGGVFQNRLLLELTDHMLLEQGFEVLKHQL 779 Query: 723 LPAGDGGLSLGQGVIAAA 740 LP DGG++LGQ V A A Sbjct: 780 LPPNDGGIALGQAVYAMA 797 >UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=Wolinella succinogenes RepID=Q7M9N8_WOLSU Length = 713 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 266/715 (37%), Positives = 376/715 (52%), Gaps = 44/715 (6%) Query: 55 ETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACL 113 E F+ + Q+ P A+IDS + E T F IR S I+P D + CP CL Sbjct: 12 EEFIQAIRQNKPRNAKIDSFKVESDEKLVGYTSFEIRDSVNMGGKCAILPADTSICPDCL 71 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 EM+ P +RRY YPFINCT+CGPR+TII+ +PYDRP T MAAF +CP C KEY DP RR Sbjct: 72 REMHDPKDRRYLYPFINCTNCGPRYTIIKELPYDRPKTSMAAFEMCPECQKEYNDPTSRR 131 Query: 174 FHAQPVACPECGPHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDAR 231 FHA+P +CP CGP L + S+G AE A++ +K G IVA+KGIGGFHL CDA Sbjct: 132 FHAEPNSCPHCGPKLTLYRSNGTPLAEGAKAIETLCKLIKKGHIVAVKGIGGFHLVCDAT 191 Query: 232 NSNAVATLRARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYVPE 285 + V LR RK RP KP AVM L + +P PIVL+ K+ Sbjct: 192 KNRVVMELRERKKRPTKPFAVMFRSVFEIGKCTELSPIEEATILSPERPIVLISKRRPHR 251 Query: 286 L------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 L CD +AP + +GV LP +PL LL+++ + PLV TS NLSG+P ++ Sbjct: 252 LEKFLISCDGVAPRVGTMGVFLPYSPLHSLLMEQAKIPLVFTSANLSGEPLIRDFKELCE 311 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLC 396 L G+ D +L H+R+I+ DDSVV +++RR+RGY P + LP F+ VL Sbjct: 312 KLSGVFDYYLDHDREILNPCDDSVVTIQNNKFQVIRRARGYAPSNVLLP--FELEEGVLA 369 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 LGA K+T L G A+LS H+GDL + + + + ++Q IY+FTP+ +V D HP Sbjct: 370 LGAQQKSTLALAFGSNAILSPHIGDLDNPSSESYFHQTREVLQGIYEFTPKIIVSDKHPD 429 Query: 457 YVSSQWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 Y S++WA ++ + V HH+AH + L+EH+ ++ + DG G G++G +WGG Sbjct: 430 YESTRWALKQKDSQVLQVQHHYAHMLSLLSEHKVK---EKILGVIWDGTGYGDDGRIWGG 486 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV---PEWQNYSE--TASV 570 E ++ E G L GG+ A K+P + LA L F E N S Sbjct: 487 EFFVGDFHGYERAGHFKEFRLLGGESAIKEPKK--LALSLMFDLYGKEALNLKHPVVNSF 544 Query: 571 QQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-SC 629 L + ++GIN+PL+SS GR FDA+AA +G +++EGE LE L Sbjct: 545 SHDELETLYKMHQKGINSPLSSSVGRLFDAMAAMIGVV-DRVTFEGECGMVLEGLYNPDF 603 Query: 630 HGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 +P + + +D+ L + A F + LA + R G Sbjct: 604 EAERYPYLVQ--EGVVDIHPMLLAILEGGEEASLVATKFINTLAHIALEVARIHRLPVG- 660 Query: 690 TTLVFSGGVIHNRLLRARLAHYLADFTLLF--PQSLPAGDGGLSLGQGVIAAARW 742 FSGGV NR L ++ + L + + +P DGG++LGQ +A A++ Sbjct: 661 ----FSGGVFQNRELCTKIERLFQNEGLPYYMHEKIPCNDGGIALGQ--VAFAKF 709 >UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y917_COPPD Length = 764 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 284/753 (37%), Positives = 395/753 (52%), Gaps = 60/753 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ------- 63 RI G VQGVGFRPFV ++A+QLNL G V N G GV + ++ E LV++++ Sbjct: 6 FRINGIVQGVGFRPFVARIAKQLNLTGFVLNSGHGVYIEVQ--GEEHLVKVFEEKLNNEK 63 Query: 64 -HCPPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGE 121 H D+ E E Q +F I S T + T I PD ATC C+ E+ TP Sbjct: 64 PHESIYIEFDTWECEEI---QDEKDFVILASETNADVFTFIPPDLATCHDCVEEILTPSN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YP NCT+CGPR+T+I +PYDRP T M FPLC C +EY +P DRR+HAQPVAC Sbjct: 121 RRYLYPLTNCTNCGPRYTVIEKLPYDRPNTSMKPFPLCAECYREYTNPKDRRYHAQPVAC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 P+CGP VS + L+ + LK GK+VAIK +GG+ LACDA N AV LR Sbjct: 181 PDCGPQTYIVSKDGGMIADPDLRKTVDILKDGKVVAIKSLGGYLLACDALNETAVNRLRK 240 Query: 242 RKHRPAKPLAVM--LPVADG---LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP +P A+M LP + + A + LL +PAAPIVL+ KK L + +AP N Sbjct: 241 LKRRPQEPFALMSTLPNIENFCYVNSAEKDLLESPAAPIVLLQKKPYGSLPEVVAPGQNY 300 Query: 297 VGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +G MLP +PL H++ + LVMTS NL G+ E L L +AD L H+R I Sbjct: 301 LGFMLPYSPLHHIIFYHWPEAVLVMTSANLHGE-VIYYEESDLPKLLEMADYVLTHDRAI 359 Query: 356 VQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V +DDSVV+ + ++RRSRGYVP + L K P+L G D K T L + Sbjct: 360 VTHVDDSVVQMLSDGPHLIRRSRGYVPLPIKLSNQCK--VPILATGGDEKATPALAKNGY 417 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 A+L Q++GDL + + + + ++ +++ PQ VV D HPGY+S ++A LP Sbjct: 418 AILGQYVGDLKNVRTMDTYLKVIDHLKELFEIEPQVVVTDKHPGYLSHRFAYSTGLPVIE 477 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 + HH AHA + + E+Q IA+ DG G G++G LWG E L V + + L Sbjct: 478 LQHHVAHALSVMEENQL----SKAIAIVYDGTGYGDDGTLWGSEVLLVENADYQRLFHFD 533 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 + L GG+ A ++PWR L A L+ + + E +N ++L +G PLA Sbjct: 534 YMPLVGGEKAIEEPWR-LAASLLQIDQAERFFGERG----RNIALLG---AKG-RFPLAC 584 Query: 593 SCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASC--------HGVTHPVTMPRVDN 643 GR FDAV+A LG C+ AT YEGE A L+ +A + + H T+ + Sbjct: 585 GMGRIFDAVSALLGVCSMAT--YEGEPAQKLQMIAENSLEKGNFADNITIHESTV----S 638 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 D+ + LN +N + FH+ +A+ L +V SGG N + Sbjct: 639 TRDIIQNIVELLNKGYEINDISRIFHNTVAE----LTVRMVIKFDWENVVLSGGSFQNNI 694 Query: 704 LRARLAHYLADFTL--LFPQSLPAGDGGLSLGQ 734 L + L L + +P D G++LGQ Sbjct: 695 LYKSVRDRLEKLGLKVFRNRQVPMNDNGIALGQ 727 >UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMW1_9PROT Length = 733 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 261/761 (34%), Positives = 392/761 (51%), Gaps = 64/761 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETF 57 M+ T+ +I G+VQGVGFRPF++++A +LN++G V N GV++ L + E F Sbjct: 1 MSYFTTKRFGFKIFGQVQGVGFRPFIYKIATELNINGFVKNSEKGVDLELEGEILQIEEF 60 Query: 58 LVQL-YQHCPPLARIDSV---EREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACL 113 + L PPLARID + E +P Q + G+ ++PD A C CL Sbjct: 61 MNVLNSDRLPPLARIDKIQQIEIKPLYREQFEIIHSTLSVNNGSKVALVIPDTAICEECL 120 Query: 114 AEMNTPGE-RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDR 172 + ++P + + Y Y CT+CGPR++II+ +PYDR T M+ F +C +C++EY +PL+R Sbjct: 121 FDTDSPYKLKYYDYFATTCTNCGPRYSIIQTVPYDRENTSMSKFKMCTSCEEEYTNPLNR 180 Query: 173 RFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 R+HAQP++C +CGP L + E+ A +K GKIVA+KG+GGFH+ CDA N Sbjct: 181 RYHAQPISCNDCGPTL-----TDTIEKTAEF------IKNGKIVAMKGLGGFHIVCDATN 229 Query: 233 SNAVATLRARKHRPAKPLAVM---LPVADGLPDAA---RQLLTTPAAPIVLVDKKYVP-- 284 + LR K+RP KPLA+M L L A+ ++LL + APIV+++K Sbjct: 230 DEVIERLRVHKNRPTKPLAIMCKDLEQVKLLASASTKEQELLASKEAPIVILNKALDAKI 289 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 ++ D +AP+++ +G LP L HLL ++L+ P+V TS NL +P I E L + Sbjct: 290 KISDKVAPNIDRIGCFLPYTALHHLLFKQLKNPIVATSANLGSEPIIIKAEDIKEKLPFV 349 Query: 345 ADGFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 D L +RDIV +DDS VV + +MLR SRG+ P + L GFK+ +L +GA+ Sbjct: 350 -DFVLDFDRDIVNGVDDSLVQVVNGNTQMLRLSRGFAPKVIKL--GFKSEKKILAVGANA 406 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KN V + +LS H+GDL + + ++ YDF P +VHD HP Y +++ Sbjct: 407 KNAIAFVIEDNIILSPHIGDLGSLKAFEFFERTIETFKSFYDFEPDVIVHDMHPNYETTK 466 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 WA+ V HH AH AC AE + GD + + DG G G +G LWGGE + Sbjct: 467 WAKAQGKELVEVQHHLAHIYACKAEFEL---SGDYLGFSFDGTGYGSDGQLWGGEIFVGD 523 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASV----QQQNWSV 577 R+ ++ L GG+ A K+P R L+ + S A V ++ + Sbjct: 524 VRKY----SFKSLKLLGGEKAIKEPRRVALSMLFDKYSLDEVLSLDAEVVKSFKESEIKI 579 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 L ++ + +NAPL+SS GR FDA+A+ SYEGEA E VT + Sbjct: 580 LHQSHTKNLNAPLSSSVGRLFDAMASFSNLLQFQ-SYEGEAGLICE--ENYKQDVTQTLE 636 Query: 638 MPRVDNQLDLA-TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 VD +D+ F+ + + F + LAQ + + + ++ SG Sbjct: 637 YKIVDGIIDIEFDFFDKNI---------VSKFINTLAQIVLDISKIEK-----MEVILSG 682 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQG 735 GV N+ L A L AD + DGG++LGQ Sbjct: 683 GVFQNKTLLELAASKLKDADIKYFYQSETAINDGGIALGQA 723 >UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NIU7_CORDI Length = 744 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 293/765 (38%), Positives = 392/765 (51%), Gaps = 68/765 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD---GVEVR-LREDP-ETFLVQLYQHCPP 67 +RG VQGVGFRP V +A + + G +C + D VE + L ED + F+ + PP Sbjct: 8 LRGVVQGVGFRPHVAAVAARHRITG-LCGNNDLEVFVEAQALSEDILDAFISDVLATLPP 66 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LA + +V + T+F I S T I PD ATCP CLA+M P RRYRY Sbjct: 67 LAHVVTVTQSSCPPISHETDFRIVASEHLPGARTLIPPDVATCPDCLADMADPNNRRYRY 126 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CTHCGPR +II +PYDRP T M FP+CP C KEY DP DRR+HAQP++CP+CGP Sbjct: 127 PFTTCTHCGPRLSIIEDLPYDRPLTTMKHFPMCPQCAKEYSDPHDRRYHAQPISCPDCGP 186 Query: 187 HLEWVSHGE-------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 L WV E + + + GKIVA+KG+GGFHL CDA N AV TL Sbjct: 187 SL-WVEATETPGRPPLRLRVDDPIAYCRDAISKGKIVAVKGLGGFHLMCDATNDEAVRTL 245 Query: 240 RARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLV--DKKYVPELCDDIA 291 R RKHRP KPLAVM+P + + AR +LT PA PIVLV K +L IA Sbjct: 246 RERKHRPTKPLAVMIPDVEKARELARLDADTTAVLTDPAHPIVLVPTTSKQRLKLSLLIA 305 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P L+ VG++LP PL LL+ P+V TS N SG+P N+ A +L +AD FL+H Sbjct: 306 PGLDYVGLVLPYTPLHTLLVDS---PVVATSANNSGEPLCWDNDVARENLTHLADVFLMH 362 Query: 352 NRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPP---VLCLGADLKNTF 405 +R I ++DSVV S +RRSRG+ P L +P + P L +G +LKNTF Sbjct: 363 DRPIHIPVEDSVVVPSAHGIVPIRRSRGFAPLPLTIPTFAEAGQPALSTLAVGGELKNTF 422 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE 465 L + A +S H+GD+ Q + A+ M ++ P +V D HP Y ++ WA+ Sbjct: 423 TLAHEDYAHISSHIGDMGSWPSQQAFHRAVDQMLSMQRTRPDLLVCDLHPSYATTAWAQR 482 Query: 466 M----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 ++P V HH AHA A LAEH+ G + L DG G G + +WGGE L + Sbjct: 483 YSESNDIPLVQVQHHEAHAMALLAEHR--ACGTPAVILAADGTGYGHDNTIWGGELLSYH 540 Query: 522 YRE-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWS---V 577 E +P L GGD A + PWR + +W E++ + + + + Sbjct: 541 PDTGFERTWHVPTFELVGGDRAVQHPWRIAAGIAHAWGLDWDCGKESSILSHTSAAEIEL 600 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 + + G SS GR FDA AA +G P S+E E+A EA A +C Sbjct: 601 VESQLSSGFGVVRTSSLGRVFDAAAAIVGIHPP--SFEAESAMLFEAAARNCEK------ 652 Query: 638 MPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 R + + L + P W FH A+AQ + E A G++T +GG Sbjct: 653 --RESEATSFPEAFAELLETRNP-----WTFHHAVAQILQHHIDEAAV--GMST-GLTGG 702 Query: 698 VIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 N+LL + L + Q +P DGGLSLGQ V+ RW Sbjct: 703 CALNQLLSSMLR------VDMRHQIVPPNDGGLSLGQAVL--GRW 739 >UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U668_HYDS0 Length = 736 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/742 (33%), Positives = 372/742 (50%), Gaps = 39/742 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCPPL 68 +L I+G VQGVGFRPFV+ LA L G V N+ DGV + + D + F+ L PPL Sbjct: 9 RLLIKGTVQGVGFRPFVYNLATSLGAKGFVLNNADGVTIEIENVDIDKFIYLLKAKKPPL 68 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 + I+ + + W +F I +S G + PD C CL E N +RRY+YP Sbjct: 69 SEIEDITIKTLDWFGFE-DFKIEESEAFGDKTPSVPPDMGICEDCLKEFNDLNDRRYKYP 127 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPR++I+ +PYDR T M F +C C KEY D +RRFHA+ ++CP CGP Sbjct: 128 FINCTNCGPRYSIVLDIPYDRKNTTMNVFEMCEDCKKEYEDKTNRRFHAEAISCPNCGP- 186 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 + W + +E + LK KI+A+KG+GGFHL C+A + AV TLR RK R + Sbjct: 187 IYWYEKDGNIYKENIFELMAKDLKDSKIIALKGLGGFHLICNALDEKAVRTLRERKKRSS 246 Query: 248 KPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKK--YVPELCDDIAPDLNEVGV 299 KP +M + + + + LT+ PIVL+ +K Y E C L+ VG Sbjct: 247 KPFGIMFKSLEEVLKYLEPKEDEIKALTSVQKPIVLIKRKSPYFEEAC----KGLSSVGA 302 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 L + L + P++ TSGN+S P N++A + L+ IADGF +HNRDI + + Sbjct: 303 FLAYTGIHLRLFDFIDFPIIATSGNISDTPICKDNDKAKSKLKDIADGFFMHNRDIKRPI 362 Query: 360 DDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSV++ ++R +R Y P + K + L +GA LK+T + + VLS Sbjct: 363 DDSVIKLIDNDVSIIRLARSYTPKPIYTNTHAKAIS--LGMGAFLKSTISIFKNNTIVLS 420 Query: 417 QHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHH 476 H+GDL ++ L YD P VV D HP + SS +A+ M T+ HH Sbjct: 421 PHIGDLESIDTIEHYKNTLEDFLRFYDVKPDIVVCDMHPNFFSSIYAKSMFSNIITLQHH 480 Query: 477 HAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVAL 536 AH + +AE+ +D +++ + DG G GE+G +WGGE + + + L Sbjct: 481 KAHILSVIAENNISID-QEILGIAWDGTGYGEDGTIWGGEFFVGDAYNLKRAFYIKPYKL 539 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYS----ETASVQQQNWSVLARAIERGINAPLAS 592 G + A K P R +L+ + E + Y E +++ L + E IN S Sbjct: 540 IGNEKAIKDPRRIVLSFLFELLKE-KAYKHPLIEKLHFEEKELKTLYKMWENDINTTKTS 598 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 S GR FD VA +G + YE + A +E + + N + +F Sbjct: 599 SIGRLFDMVAYLMGLTDV-IDYEAKGAMMVEDRYID----SKEYYDFHISNNEIIISF-- 651 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 + + + +++ A F + L + ++++ + +V SGGV +NR L +L L Sbjct: 652 EDILGEKEIDKMASKFINTLFEIIVSIIK----LLKAKNVVVSGGVFYNRPLMRKLKA-L 706 Query: 713 ADFTLLFPQSLPAGDGGLSLGQ 734 L + + +P GDGG+S+GQ Sbjct: 707 DGINLFYNKKIPTGDGGISVGQ 728 >UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=cellular organisms RepID=A8TDR5_METVO Length = 830 Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust. Identities = 271/834 (32%), Positives = 417/834 (50%), Gaps = 123/834 (14%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ + G VQGVGFRPFV+ +A++ NL G V N G+ VE+ + +D FL+ L + P Sbjct: 4 KIFVSGIVQGVGFRPFVYNIAKKNNLKGYVKNKGNFVEIVVNGNLKDINNFLINLKEEKP 63 Query: 67 PLARIDSVEREPFI---------------WSQLPTEFTI--RQSTGGTMNTQIVPDAATC 109 L++I+ +E E +L EF I Q+ + I PD A C Sbjct: 64 VLSKINKLEIEDIDTNNDLDNDLNNKLDGLEELNKEFHIYSSQNVNNEVAGTIPPDIALC 123 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 C+ E+ + RY YPFI C +CGPRFT+I+ +PYDR T M FPLC C+KEY++P Sbjct: 124 DDCIKELKDKKDIRYEYPFIACVNCGPRFTVIKKLPYDRENTSMDKFPLCENCEKEYKNP 183 Query: 170 LDRRFHAQPVACPECGPHLEWV-SHGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 DRRFHAQ C +CGP + S+G E+E+A++ A+ L+ GKI+AIKGIGG HL Sbjct: 184 NDRRFHAQANCCDKCGPKVFLTDSNGNKLLEKESAIKKAVELLEDGKILAIKGIGGTHLV 243 Query: 228 CDARNSNAVATLRARKHRPAKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKK- 281 CDA N +A+ LR R +RP + A+M P+ + L + PIV + KK Sbjct: 244 CDANNDDAILELRKRLNRPTQAFAIMSTEEKYPLFSKFTKIEEEALNSYRRPIVALKKKE 303 Query: 282 --YVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQAL 338 Y + ++I+ +L+ VGVMLP + L +LL +C VMTS NL G P AI+N++ + Sbjct: 304 NGYNKYISENIS-NLDTVGVMLPYSGLHYLLFG--KCTAYVMTSANLPGLPMAITNDKII 360 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALAL----------P 385 L+ IAD FL+HNRDIV R DDSV++ +LRRSRGY P+ + + Sbjct: 361 ESLKDIADYFLLHNRDIVNRCDDSVLKLISNRMMILRRSRGYAPEPIEIDFSKMAEFENK 420 Query: 386 PGFKNV--------------------PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDD 425 +KN ++ +GA+L + CL +G + ++Q++G+ S Sbjct: 421 NKYKNKDENENENKEIINELNNKKIEKNIISVGAELNSVACLTKGNKFYMTQYIGNTSKY 480 Query: 426 GIQMQWREALRLMQNIYDFTP----QYVVHDAHPGYVSSQWA----REMNLPTQTVLHHH 477 ++A+ NI T +V D HP + S ++A +E + P + HH Sbjct: 481 ETYNYLKDAV---HNILRLTNTNKLDTIVCDLHPQFNSKKFANELTKEYDAPMFEIQHHA 537 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLGGLPAVA 535 AH + + ++ + I + LDG+G G++G +WGGE L NY E +G L Sbjct: 538 AHVYSLMGDNGFFEPN---ITIALDGLGYGKDGNIWGGELLYCDKNY-EIHRIGHLEEQL 593 Query: 536 LPGGDLAAKQPWRNL---------LAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 GGDL+ K P R L L + FV ++ + + ++ ++ I+ G+ Sbjct: 594 QLGGDLSTKYPLRMLFSILSKKMSLDESFEFVKKY--IGKYPELTEKELKLIKMQIKSGL 651 Query: 587 NAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 N + +S GR D+VAA L C T Y+GE + LEA A SC + V+N Sbjct: 652 NTAITTSTGRVLDSVAALLSVCFKKT--YDGEPSIRLEAFANSCDEKEKKQILEFVENMD 709 Query: 646 DLATFWQQWLNWQAPVNQR---------------------AWAFHDALAQGFAALMREQA 684 ++ + + ++++ + + A+ H LA + A Sbjct: 710 NIR--YSRLIDYENNIIKTSEIVYDCYTLLQNEVFSKKGIAYYAHLVLANCLCIISENSA 767 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGV 736 I TL +GGV +NR++ + L + F +L ++P GDGG++ GQ V Sbjct: 768 KKLNINTLGLTGGVSYNRIITEYMVIKLKNKGFNILLHNNVPNGDGGIAFGQSV 821 >UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein HypF n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4296C Length = 779 Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust. Identities = 273/779 (35%), Positives = 419/779 (53%), Gaps = 55/779 (7%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQ 60 T V++++ G+VQGVGFRP+V+ LA++ L+G + N+ D V + + + E FL Sbjct: 8 KTYKAVKIKVGGRVQGVGFRPYVFSLAKRWQLNGTIQNNSDKVIIHVEGEEYSIEHFLHH 67 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTP 119 L + P LA+I ++E +P ++ +F+I +S G+ I D+A C CL E+N P Sbjct: 68 LKESPPLLAKITNLEHQPTVYKSY-QQFSILESDLTGSPLPAISADSAVCQDCLNELNDP 126 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRY YPFINCT CGPR+TI+ +PYDR T M +F +C C +EY DP++RR HAQP Sbjct: 127 SNRRYHYPFINCTQCGPRYTILEKLPYDRKHTTMHSFMMCEDCLEEYGDPMNRRHHAQPT 186 Query: 180 ACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 C +CGP L V+ AE E+A++ I L G+I++IKG+GG+HLACD + A+ Sbjct: 187 CCAKCGPSLSLVNQKREVIAEGESAIRGTIDALTEGRIISIKGLGGYHLACDMKQPYAIT 246 Query: 238 TLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR K RP +PLAVM+ + + +LLT+P PIV++ +K L +++A Sbjct: 247 HLREIKSRPTRPLAVMMRSLEIVKQYCHVSLKEEELLTSPIMPIVVLKQKINRSLPNELA 306 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P L +GVMLP PL +LL + +V+TS N SG P +++ L + G+++ L Sbjct: 307 PGLTTLGVMLPYTPLHYLLFKLGGLEGIVLTSANSSGLPIKY-HDKDLFEKGGLSEFSLT 365 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I +DDSVV +G LR++RG+VP+ + + ++ LG KNTF + Sbjct: 366 HNRVIKNPLDDSVVEVNGLDETYLRKARGFVPEPIKTTI---DTSGIVALGGQQKNTFSI 422 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 GE ++S H+G++ ++ + + + + + + I + +V D H GY ++ A++++ Sbjct: 423 GIGEHILMSPHIGEVDNEEMLDHFIQQIGVYKRIVNIDMDHVAIDKHLGYSVNKLAKDLS 482 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDV---IALTLDGIGMGENGALWGGECLRVNYRE 524 TV HHHAH AC+ D G V + + LDG G GE+G +WG E L + Sbjct: 483 PNVVTVGHHHAHHVACME------DNGVVDPCVGIILDGTGYGEDGHIWGFEFLYGDAAA 536 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP-EWQNYSETASVQQQ-NWSVLARAI 582 + L + LPGG++A K+PWR L P E Q +E ++ S+L + + Sbjct: 537 YKRLAHMCYCPLPGGEMAVKEPWRTASGMILHHWPKEGQEMAERLFPDKKAEISILKKMV 596 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL-------AASCHGVTHP 635 + IN+P+A +CGR FD V+A LG + SYEGEAA L A S V Sbjct: 597 KLKINSPMAGTCGRLFDTVSAILGVCLKS-SYEGEAAIKLAGYMNENYLNARSIEKVAQS 655 Query: 636 VTMPRVDN-----QLDLATFWQQWL--NWQAPVNQRAWAFHDAL----AQGFAALMREQA 684 + + QLD + Q + Q + + + FH + + AL +E+A Sbjct: 656 YPFKIIQSAKGPFQLDFSPMISQIIQEKEQLQLEEIIYKFHQTVVLSCVEMILALYKEKA 715 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + +V SGG N L L++ L F + Q +P DGGLS GQ +IAA + Sbjct: 716 WLP--KRIVLSGGSFQNGYLSRELSNSLKQKGFKVYAHQQIPCHDGGLSFGQLIIAAHK 772 >UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 Tax=Shewanella RepID=Q0HUQ7_SHESR Length = 840 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 289/810 (35%), Positives = 406/810 (50%), Gaps = 98/810 (12%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 QL I G VQGVGFRPFV++ A +L L G V N+ +GV + L+ ++F+ +L + P Sbjct: 30 QLHITGIVQGVGFRPFVYRWASELKLTGTVLNNANGVMIELQGPTAHLDSFVRELTTNPP 89 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-------------IVPDAATCPACL 113 PLARID + + P + T F I QS + + + D + C CL Sbjct: 90 PLARIDQMTQSPLAVNLEETSFDIIQSDSQSDDQSDESGEHHLAALVAVSADKSICQDCL 149 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 ++M+ P +R Y Y F NCT+CGPR+TII A+PYDR T MA F +CP C K Y+DPL+RR Sbjct: 150 SDMHNPQDRHYGYAFTNCTNCGPRYTIINALPYDRHHTAMADFAMCPDCAKAYQDPLNRR 209 Query: 174 FHAQPVACPECGPHLEWVS-HGE-------HAEQE---AALQAAIAQLKMGKIVAIKGIG 222 +HAQPV+CP+CGP L S GE A Q+ A L AA +L G+I+AIKG+G Sbjct: 210 YHAQPVSCPKCGPQLSLKSPQGELLAPNSLSALQDNSLAVLSAAAEKLAQGQILAIKGLG 269 Query: 223 GFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIV 276 GFHL CDA N+ AV LR RK R AKPLAVM+P + A Q L++ PIV Sbjct: 270 GFHLMCDATNTLAVNQLRQRKQRKAKPLAVMMPSIEVAKRYVTGTQAEWQTLSSQERPIV 329 Query: 277 LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQ 336 L+ L IAP++ ++G+ LP PL HLLL + PLV TS N+SG+P ++ Sbjct: 330 LMQALDKHNLSHQIAPNIPKLGIFLPYTPLHHLLLGQFNGPLVATSANVSGEPIITDCDE 389 Query: 337 ALADLQGIADGFLIHNRDIVQRMDDSVVR---------ESGEMLRRSRGYVPDALALPPG 387 ++ L + D + HNR I+ DDSVV+ ++LR +RGY P + LP Sbjct: 390 LISQLGHVVDAIVDHNRPILNGCDDSVVQLIQPPNGCAPQVQVLRLARGYAPLSFPLPKP 449 Query: 388 FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 + +L +GA KN L G LS H+GDL + + L +Y F P+ Sbjct: 450 LSH--SILAVGAQQKNAIALGFGSNVFLSPHIGDLFSVSAEQYFERTLATFARLYHFNPE 507 Query: 448 YVVHDAHPGYVSSQWA---REMNLPTQ----------TVLHHHAHAAACLAEHQWPLDGG 494 +VHD HP Y S+WA ++ +L TQ +V HHHAH + +A +Q+ Sbjct: 508 LIVHDKHPDYAPSRWAETQQQHSLDTQSQDTRPIQTLSVQHHHAHVLSVMAINQY---QE 564 Query: 495 DVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC 554 V+ + DG G+G +G+LWGGE L E L A+ L GG+ A KQP R LLA Sbjct: 565 PVLGFSFDGTGLGNDGSLWGGEVLLTTLNGAERLAHFEAIPLLGGEQAIKQPVRLLLALL 624 Query: 555 LRFVPEWQNYSETASVQQQNWSVLARAIER------GINAPLASSCGRFFDAVAAALGCA 608 + + + + T + + + R GIN +SS GR FDA+A ALG Sbjct: 625 FQQMSLEEVQTLTLPILTILSPITLSNLHRIWQNGHGIN---SSSVGRLFDALACALGFI 681 Query: 609 PATLSYEGEAACALEALAASCHGVTHPVTMPRV---------DNQLDLATFWQQ------ 653 T +EG+A +EA A P M + D+ + W+ Sbjct: 682 DTT-QFEGQAGMLIEAAARRADAKQLPTLMLDLPLEISDMPSDSSMHEPHIWRSSQLFKQ 740 Query: 654 --WLNWQAPVN-----QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 L +AP+ Q A AF ++ T+ + GGV N+ L Sbjct: 741 IITLITEAPLTDVLQAQIARAFLHSVGDAICGYAARYPTL----PVALCGGVFQNQYLLE 796 Query: 707 RLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 + L T+L + +P DGG++LGQ Sbjct: 797 YCLNKLHQQGNTVLPNKHIPVNDGGIALGQ 826 >UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Nautilia profundicola AmH RepID=B9L8N7_NAUPA Length = 759 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 259/778 (33%), Positives = 386/778 (49%), Gaps = 81/778 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCPP 67 ++ +I G VQGVGFRP V+++A++L+L G V N DGV + + E+ F+ L + PP Sbjct: 3 IKYKINGIVQGVGFRPTVYKIAKELDLKGYVLNSSDGVIIEIEGENQNKFIETLKNNLPP 62 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LARID++E+E + + T+F I +S T T I PD A C CL EM RRY +P Sbjct: 63 LARIDTIEKE-ILERKNYTDFEIIESKQTTKTTSISPDIAICDECLKEMFDKNNRRYLFP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPR+TII+ +PYDR T MA F +C C +EY +PLDRR+HA+P C ECGP Sbjct: 122 FINCTNCGPRYTIIKDIPYDRKNTSMAKFKMCEKCYEEYTNPLDRRYHAEPTCCFECGPE 181 Query: 188 L--EW-----------VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 L +W + +GE ++ L A ++K GKIVAIKG+GGFHL C+A N Sbjct: 182 LNVKWKMENGTWKELRIENGEWRIKKIELIA--EKIKEGKIVAIKGLGGFHLVCNATNEE 239 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKY-VPELC 287 AV LR RK RP KP A+M D + + +L+T+ PIVLV K+ +P++ Sbjct: 240 AVKELRRRKQRPTKPFAMMFKDLDTIKEYCDLSAKDTELITSKEKPIVLVKKRVDLPQIA 299 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 D I + GV LP P+ +LL + + P+V TS N+S +P + + + L + D Sbjct: 300 DGI----DRYGVFLPYTPVHYLLFEYIDFPIVATSANISDEPIIRDSNELVEKLGNVVDY 355 Query: 348 FLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVP------------ 392 L ++RDI+ DDSVV+ +R +RGY P + N Sbjct: 356 ILDNDRDIINACDDSVVQAVEFEYITMRCARGYAPLMKNVKFKMDNGKWTMENEKDKIDR 415 Query: 393 -------------PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQ 439 +L +GA+ KNT L ++ +LS H+GDL G + + + Sbjct: 416 NNNSQFSILNSQLNILGVGANQKNTISLSFKDKFILSPHIGDLGTIGSIEYFERTIDTFR 475 Query: 440 NIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 +YDF ++ D HP Y S++WA + N + HH+AHA A + E+ GD +A Sbjct: 476 RLYDFEEDVIICDKHPYYESTKWALKQNKKIYQIQHHYAHALATMFEYDLE---GDYLAF 532 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 DG G G++G +WGGE N E + L GG+ A K P N+ L Sbjct: 533 IFDGTGYGDDGTIWGGEVFIANRHTYERVHYFKQFKLIGGEKAVKNP-ANMAVALL---- 587 Query: 560 EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAA 619 + ++ LA+ + +G + PL SS GR FD VA G +EG + Sbjct: 588 ------DDEIAEKFKNRKLAKNLSKG-SFPLTSSMGRIFDMVAYLAGMIERN-EWEGMSG 639 Query: 620 CALEALAASCHGVTHPVTMPR---VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGF 676 +E + R V ++D + LN+ A Sbjct: 640 LLIEKYYNPEIAEYISLADSRGCGVKKEIDFV----ELLNFAAKNRGDFELVSSVFINSI 695 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 A + E + M + ++ GGV N+ L + + ++ + F +++P DGG+S+GQ Sbjct: 696 ANCVVEISEMYDL-DVILGGGVFQNKTLLSEILK-RSNKKIYFNKTIPINDGGISVGQ 751 >UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Aeromonas RepID=A0KL72_AERHH Length = 812 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 302/783 (38%), Positives = 408/783 (52%), Gaps = 73/783 (9%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 + I G VQGVGFRPFV+ LA + + G V ND +GV + PE F +L + P Sbjct: 21 EFHIDGIVQGVGFRPFVYGLALRHGIAGYVLNDANGVTIGAEGSPEQLAAFARELRELAP 80 Query: 67 PLARIDSV-ERE------PFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNT 118 PL+RID +RE P +F I+ S + T I PD C AC ++ Sbjct: 81 PLSRIDHFSDRELPLAHGPDYDGHFHGQFRIKASQQQSSATVAISPDQGMCEACANDVAN 140 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P +R +RYPF NCTHCGPR+TIIR +PYDRP T MA F +CP C Y +PLDRR+HAQP Sbjct: 141 PNDRHHRYPFTNCTHCGPRYTIIRRLPYDRPHTAMAGFAMCPRCAAAYENPLDRRYHAQP 200 Query: 179 VACPECGPHLEWVS-HGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 V+CPECGPHL W S G+ AE+E ALQAA + L+ G ++A+KG+GG+HL CDARN +V Sbjct: 201 VSCPECGPHLSWRSGRGDALAEREDALQAAASALQAGALIAVKGMGGYHLVCDARNKQSV 260 Query: 237 ATLRARKHRPAKPLAVML-PVADGLP-----DAARQLLTTPAAPIVLVDKKYVPE----- 285 A LR K R KPLAVM+ +A+ +A QLL + A PI L+ K+ + Sbjct: 261 ARLRTLKRRERKPLAVMMGSLAEAKLHVTGCEAEWQLLASQARPITLLRKRKNDDRPSKS 320 Query: 286 ------LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 L + IAP + +GVMLP PL LLL PLV TS N G P I E + Sbjct: 321 QLTTAPLAEGIAPGIPYLGVMLPYTPLHQLLLDACAIPLVATSANGRGSPILIECEAVIR 380 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLC 396 +L DG L HNR I+ DDS+V+ +G + LR +RGY P +L P+L Sbjct: 381 ELGSEIDGILDHNRPILHPCDDSLVQWAGRRRQTLRLARGYAPCTPSLQEAVNL--PLLA 438 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +GA KN L G Q + S ++GDL +Q + + L +++YD P+ +V D HPG Sbjct: 439 VGAQQKNQLALAFGRQRIYSPYIGDLHSLPMQSHFEQTLATFRDLYDLKPELLVSDRHPG 498 Query: 457 YVSSQWA----REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 Y+S QWA R+ V HHHAH +AEH G V+ + DG G+G++G L Sbjct: 499 YLSHQWAKSYCRDQGAIHLEVQHHHAHLLGVMAEHDIT---GPVLGVAFDGTGLGDDGTL 555 Query: 513 WGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR-FVPEWQNYSETASVQ 571 WGGE L + + + L L GG+ A ++P R LL +V + + + +++ Sbjct: 556 WGGELLLADVKGFTRVAHLKPFKLIGGEAAIREPVRQLLGLLFESYVVDETSALDIPAIK 615 Query: 572 Q---QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 Q + L + + G NAP SS GR FDAVAA LG T YEGEA LEA A Sbjct: 616 QLPAERIRNLHQLWQLGRNAPYTSSIGRLFDAVAALLGVI-DTPDYEGEAGLLLEAAALQ 674 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPV--NQRAWAFHDALAQGFAALMREQATM 686 P + +Q QW + +R + +LA GF + Sbjct: 675 LAPDEVPFPLAFDLSQSAEGPLQIQWAELINTLVSERRKGSSTASLAAGF---------I 725 Query: 687 RGITTLVFS-------------GGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLS 731 R I+ LV + GGV NR+L +L L A +L ++LP DGG++ Sbjct: 726 RAISNLVIALAERFPGYPVALGGGVFQNRVLMDQLVPALEAAGRQVLTSETLPLNDGGIA 785 Query: 732 LGQ 734 GQ Sbjct: 786 AGQ 788 >UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKV0_AKKM8 Length = 775 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 292/782 (37%), Positives = 389/782 (49%), Gaps = 57/782 (7%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLV 59 + + ++ I G VQGVGFRP V++LA + L G V N GVE+ + +P E F Sbjct: 7 EQAAAALKFEIAGMVQGVGFRPHVYRLAVRHGLKGFVRNTESGVEIHVEGEPGAPERFWT 66 Query: 60 QLYQHCPPLARIDSVER---EPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEM 116 L P AR+ VER EP + + E + ST G + ++PD A CP CL EM Sbjct: 67 ALMDGLPEHARVYGVERTVCEPAGFEEFRIEES--DSTPGGVPV-MLPDLAPCPECLEEM 123 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 + P RRY YPF NCTHCGPR++II MPYDR T M F +CP C +EY+D DRRFHA Sbjct: 124 HDPSSRRYHYPFTNCTHCGPRYSIIETMPYDRARTSMKGFRMCPECRREYQDVEDRRFHA 183 Query: 177 QPVACPECGPHLEWV-SHGE-----HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDA 230 QP+ CP CGP ++ + S G H A Q A L G IVA+ G+GGF L DA Sbjct: 184 QPIGCPSCGPSVKVLFSDGSELGFGHGFDTPAAQVAWV-LADGLIVALLGVGGFQLLADA 242 Query: 231 RNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVP 284 + AV LR K R AKP AVM+P L + R+LLT+PAAPIVL Sbjct: 243 SSEAAVRRLRRLKERDAKPFAVMVPDVAAAERLCRLSEEERRLLTSPAAPIVLARGGKDV 302 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 +L + VG+MLP++PL LL+ PLV+TSGNLSG+P +S E+ L L + Sbjct: 303 DLAPSVCMFSRFVGIMLPSSPLHALLMDVWGKPLVVTSGNLSGEPLCVSVEEGLEKLGHV 362 Query: 345 ADGFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 AD FL+H+R +V+ +DDSVVR + M+RR+RGY P + P +L LGA L Sbjct: 363 ADVFLVHDRPVVRPVDDSVVRVTDGRAMMVRRARGYAPRPVWRTSA--AAPDMLALGAGL 420 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG----Y 457 KNT C ++ AV+SQHLGDLS + + + D PQ + DAHP Sbjct: 421 KNTICWLKRGVAVMSQHLGDLSSAASLNAFERTVEALGRTLDAVPQVIAVDAHPDGPTFA 480 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 + + AR+ N V HH AH AC E++ P + + DG G G +G +WGGE Sbjct: 481 LGRRLARKWNATVVPVQHHQAHVLACAVENETPFP---ALGIAWDGTGFGTDGTVWGGEF 537 Query: 518 LRVNYR-ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ---- 572 + E + L LPGGD A ++P R + + P W+ Y +++ Sbjct: 538 FVLEEEGEPRRVARLRPFLLPGGDEAVREPSRCACSLARQMGP-WRTYGLDKRLERGMPV 596 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 + VL + R I+ P +SS GR FDAVA G A EG AA LE+ AA G Sbjct: 597 RKREVLEAMMARNIHCPSSSSMGRLFDAVAFWCGFDGAA-GCEGHAAMMLESWAAEASGE 655 Query: 633 THPVTMPRVDNQLDLATFWQQWLNWQAPVNQR----------AWAFHDALAQGFAALMRE 682 P + W V++ A FH++L L+ + Sbjct: 656 KMPGDAYEWVMHEEGGLLELDWRPLMKSVDEDLLEGVSRGCIARKFHESLVN----LVFD 711 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAA 740 A + LV GG N L LA L PQ +P DGG+SLGQ Sbjct: 712 VAERFCLDRLVLGGGCFQNAFLLEGLAGMAQSRRCQLSLPQRVPCNDGGISLGQVAAVVR 771 Query: 741 RW 742 +W Sbjct: 772 QW 773 >UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YF85_METS5 Length = 743 Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust. Identities = 261/740 (35%), Positives = 396/740 (53%), Gaps = 37/740 (5%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCN-DGDGVEVRLREDPET---FLVQLYQHCPPLAR 70 G VQGVGFRPFV++ A + + G V N G VE+ ++ ++ F + + PP +R Sbjct: 10 GIVQGVGFRPFVFRTALKSGVSGFVRNLSGSEVEIVIQGSQDSISKFFSLFFLNLPPQSR 69 Query: 71 IDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFIN 130 ++ + P L ++ +QI PD + C C+ E+ PG RRYRYPF + Sbjct: 70 LEQITITPLEGDILQGFKILKSEKMRYEASQIPPDFSVCSECIREVLDPGNRRYRYPFNS 129 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP-LDRRFHAQPVACPECGPHLE 189 C +CGPRF+++R +PYDR T M FPLC C +EY DP +RRF AQ ++CP+CGP L Sbjct: 130 CVNCGPRFSMMRKVPYDRENTAMVEFPLCDECAQEYNDPDNERRFDAQGISCPKCGPRLY 189 Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKP 249 + + ++ A L GKI+AIKGIGGFH+ACD + + V TLRARK RP+KP Sbjct: 190 IEDMRGNRLEGDPIKLAGKLLTEGKIIAIKGIGGFHIACDPFDDDVVLTLRARKGRPSKP 249 Query: 250 LAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 AVM +D + + A + +L +P PIVL+ K+ + ++P L+ G L Sbjct: 250 FAVMSISSDIISNFAEINPLEKDILESPERPIVLLKKREDSPISKHVSPGLDREGFFLYY 309 Query: 304 NPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 PL ++LL E++ LVMTS N G P + L GI D L H+R+IV R+DDS Sbjct: 310 TPLHYMLLSEVKGNTLVMTSANRHGYPMCTTESCVKEKLSGIVDYMLYHDREIVNRVDDS 369 Query: 363 VVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 V++ +G +LRR RGY P + + FK P + LGA+L+N L+ ++ +L+Q++ Sbjct: 370 VIKFAGNRLHILRRGRGYAPLWIRMKSKFKT--PAIALGAELQNAGALMFDDKVILTQYV 427 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG----YVSSQWAREMNLPTQTVLH 475 GD + + L + + YD P+ ++ D +PG YV+++ + + + V H Sbjct: 428 GDTDKLENLQEMEKMLNFLMSTYDVRPRVILVDKNPGYQTRYVANRLSEKFSAEIVEVQH 487 Query: 476 HHAHAAACLAEHQWPLDGGDV-IALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 H AHA + A+H G D +A+ +DG+G G++G WGGE L E E L V Sbjct: 488 HFAHALSVAADH-----GSDEGVAIAIDGVGYGDDGNAWGGEILLFTGSEYERSYHLKYV 542 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSC 594 PGGD+ A +P R +LA L V + + A + +N ++ R+ RG N SS Sbjct: 543 PYPGGDVNALRP-RRMLAIFLSQVMTLEEAGKIAGL-NENEVIMLRSSLRG-NRIYTSST 599 Query: 595 GRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW 654 GRF DAV+A LG +YEGE A LEA A+ +G + +P V N++D ++ Sbjct: 600 GRFLDAVSAFLGVCDRR-TYEGEPAIRLEASAS--NGKLLDLDIPVVGNEIDTLKAFEWL 656 Query: 655 LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD 714 ++ + VN A L + AL + + LV G ++ +LR L Sbjct: 657 ISEEGKVNDIALTVQYRLGE---ALAKAALKLNPQVILVSGGAAVNEYILRG-LRENSEG 712 Query: 715 FTLLFPQSLPAGDGGLSLGQ 734 ++ P+ +P+ DGG++LGQ Sbjct: 713 IEVITPRRVPSNDGGIALGQ 732 >UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroidales RepID=A6LCY2_PARD8 Length = 760 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 289/779 (37%), Positives = 409/779 (52%), Gaps = 61/779 (7%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETF 57 MAKN L I+G VQGVGFRPF++++A+ L + G V N +GV + + +D + Sbjct: 1 MAKNKVYA--LIIQGLVQGVGFRPFIYRIAKDLGMKGCVENMNNGVRILVAATPDDRDLL 58 Query: 58 LVQLYQHCPPLA---RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLA 114 + ++ P +A RI E T S + TQ+ PD A C C+ Sbjct: 59 ISRIRTEHPRVAYIHRISYTSTEMDEDDFDDFTITPSHSESDEV-TQVSPDIAVCADCMR 117 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 + T R YPFINCTHCGPRF+IIR +PYDR T M F +CP C+KEY + +DRRF Sbjct: 118 DRTTQ-PHRIGYPFINCTHCGPRFSIIRDLPYDRSQTTMGGFLMCPDCEKEYTNVIDRRF 176 Query: 175 HAQPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 HAQPVAC CGP + E + + E L+ L G+++A KGIGG+HL CDA N Sbjct: 177 HAQPVACNHCGPTYYATYNEETYIDYETLLKLTSRLLLGGEVIAAKGIGGYHLICDASNE 236 Query: 234 NAVATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELC 287 AVA LR K R KP AVM L V + L + PIVL+ ++ L Sbjct: 237 RAVARLREIKQRDTKPFAVMFRDLEHLQVYTATEPMEERCLVSWRRPIVLLRQR--SRLA 294 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIAD 346 I P ++ +G ML P+ + P LVMTSGNLS P AI+ E A A L G Sbjct: 295 SGINPGMHTLGCMLSYMPIHYDWFARTGIPALVMTSGNLSDLPIAITPEDAEAQLAGKVA 354 Query: 347 GFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGF--KNVPPVLCLGADL 401 L HNR I R+DDSV++ G ++RRSRGYVP+ P F NV ++ GA+ Sbjct: 355 ILLHHNRPIHNRVDDSVLQVCGGQPCLIRRSRGYVPE-----PFFTDTNVEGIMAFGAEK 409 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 NTF L +GE + SQ++GDL + + E++ ++++ F Q +V D HP Y+SSQ Sbjct: 410 VNTFALGKGETILQSQYIGDLKNWETFRFYTESMERFRHLFRFNLQRLVCDLHPDYLSSQ 469 Query: 462 WA----REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE- 516 A + ++LP V HHHAHAAAC+ EH V+A+ +DG G+G++G +WGGE Sbjct: 470 EAERISKSLSLPLLKVQHHHAHAAACMLEHGL---NEPVLAIVMDGTGLGDDGKVWGGEF 526 Query: 517 --CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-------VPEWQNYSET 567 C R YR H +P LPGGD AA++PWR ++A + +P ++ E Sbjct: 527 FFCDRAKYRRLSHFEYVP---LPGGDKAAEEPWRMVVAYLWHYFKDEPSGIPYPADFVE- 582 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE-ALA 626 + + ++L R +E+G+N P SS GR FDAVA+ LG + S++ EA LE A Sbjct: 583 -RIGTERIAMLERMMEKGVNTPYTSSAGRLFDAVASLLGICDVS-SHQAEAPVLLEQAAM 640 Query: 627 ASCHGVTHPVTMPRVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQ 683 + +PV+ ++ + ++ L+ + PV+ + FH LA F R Sbjct: 641 GERNAYAYPVSAE--GEEISFYSLFEALLHDKTNEVPVSLISARFHTTLASLFVQKARLL 698 Query: 684 ATMRGITTLVFSGGVIHNRLL--RARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 T +V SGG N+LL R +A + P +P DGG+++GQ IA+ Sbjct: 699 IKRTKATQVVISGGCFQNKLLTESMRRQFIMAGVPVYIPSRIPCNDGGIAVGQLTIASV 757 >UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK63_9FIRM Length = 782 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 278/781 (35%), Positives = 400/781 (51%), Gaps = 60/781 (7%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHC 65 + ++I G VQGVGFRPFV +LA + G VCN G VEV + + F+ + + Sbjct: 4 LNIKIYGIVQGVGFRPFVSRLADACQIRGTVCNKGPYVEVFAEGNDAALQQFVEGIPKKA 63 Query: 66 PPLARIDSVEREPFIWSQLP-TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 P A I V+ + P +F I +S + + PD ATC C AE+ P +RRY Sbjct: 64 PERAAILKVDVHEVTDAAPPYADFAIIESAKERGDIFVSPDIATCDKCRAELFDPKDRRY 123 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +PFINCT CGPR TI+ +MPYDR T M FP+C AC KEY P RR+ AQPV C C Sbjct: 124 LHPFINCTACGPRLTILESMPYDRERTSMKEFPMCAACHKEYVSPESRRYDAQPVCCNAC 183 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 GP + + H E A++A L G I AIKGIGGFHLACDA + AV LR KH Sbjct: 184 GPQVYLLGH-EDVRGADAIRAVRRVLASGGIAAIKGIGGFHLACDATDEAAVHRLRTLKH 242 Query: 245 RPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 RP KP AVM+ + L +++T PI+L+ ++ L +AP +VG Sbjct: 243 RPQKPFAVMMRDEETARRACHLEPGEAEMMTGHQKPILLLRRREDSPLAPSVAPGNPKVG 302 Query: 299 VMLPANPLQHLLLQ--------ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 VMLP P+Q L+ E+ LVMTSGN SG P ++E+A L + D L Sbjct: 303 VMLPYAPVQMLIFDYPEDHETPEVPAMLVMTSGNPSGAPICHNDEEAEETLAPLCDVILS 362 Query: 351 HNRDIVQRMDDSVVR-ESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I R DDSV+ +G M+RRSRG+ P L + VL +G +LKNTFCL Sbjct: 363 HDRRIRLRADDSVMDWFAGRPYMVRRSRGFAPLPFMLSAPLQG--QVLGIGGELKNTFCL 420 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY----VSSQWA 463 S ++GD+SD + +++++LM+++ + P+ + D HP Y V+ A Sbjct: 421 ASSHLFYPSPYIGDMSDLRTVLALKDSVQLMESLLENRPEAIACDLHPRYNTSAVAEALA 480 Query: 464 REMNLPTQTVLHHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 +E +P V HH+AH +C+AE+ Q P VI ++ DG G G + +WGGE L + Sbjct: 481 KEAGVPLFKVQHHYAHILSCMAENDQQAP-----VIGVSFDGTGYGTDSTIWGGEFLLAD 535 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPEWQNYSETASV-------- 570 Y+ LG + + GGD ++++ WR +LL L ++ +E +V Sbjct: 536 YKGFRRLGSIEPFSQAGGDKSSREGWRIAVSLLRDTLVRTMAGRSAAEVDAVWKEQCLAL 595 Query: 571 ---QQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 ++ ++ + + + +N ++S GR FD V+A LG + ++EGEA+ AL+ A Sbjct: 596 GLCDEKEFAAQSFMLRQHVNCIESTSAGRLFDGVSALLGLRRES-TFEGEASMALQFAAE 654 Query: 628 SCHGVTHPVTMP---RVDNQLDLAT---FWQQWLNWQA--PVNQRAWAFHDALAQGFAAL 679 S G + +P D + L T F + Q + A+ FH ALA+ A Sbjct: 655 SAEGTDGSLDLPLHEAADGRFLLPTTALFGALYARHQQGRAAEELAYRFHQALAEMIVAG 714 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 G++T+ SGGV N LL + L A F L LP DGG+ +GQ Sbjct: 715 CERARRETGLSTVALSGGVFQNLLLTRLVKDSLEAAGFQPLLHSLLPPNDGGICVGQAAF 774 Query: 738 A 738 A Sbjct: 775 A 775 >UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F9D0_SORC5 Length = 783 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 305/788 (38%), Positives = 405/788 (51%), Gaps = 72/788 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE----TFLVQLYQH 64 + LR+ G VQGVGFRPFV++ A L L G V N GVE+ + + PE F+ L + Sbjct: 4 LALRVYGIVQGVGFRPFVYRRASALGLGGWVRNRPGGVEIEV-QGPERSLHAFVAGLTRE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 AR++ +E E Q F I S G VP D A C C E+++ RR Sbjct: 63 PSAPARVERIEIE-RRAEQDAGPFQILGSEAGNGARPSVPADLAVCEECAREVDSETGRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 RYPF +C CGPR+TI+ +PYDR T M FP+CPAC EY DP DRRFHA+P+ACP Sbjct: 122 RRYPFTSCARCGPRYTILSGLPYDRARTTMDRFPMCPACAAEYADPSDRRFHAEPIACPA 181 Query: 184 CGPHLEWVSHGE---------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP ++ V+ + AL+ A A + GK+VA+KG+GGFHL DA + + Sbjct: 182 CGPRVQLVAAARDPMDPGIRSSGSPDGALREAAAAVLAGKVVAVKGLGGFHLLVDATSPD 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVP---- 284 AVA LR RK R AKP AVM D + A R L P APIVL+ ++ P Sbjct: 242 AVALLRRRKRRDAKPFAVMFGSLDAVRGACRVSAAEADALRGPEAPIVLL-RRLSPAAAR 300 Query: 285 -ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 + D +AP +G +LP PL L+L+ + P+V TSGNLS +P AL L G Sbjct: 301 VAIADAVAPGTPRLGALLPYTPLHRLVLELVGRPVVCTSGNLSDEPICTDASDALERLGG 360 Query: 344 IADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 IAD FL+H+R IV+ +DDSV R E+LRR+RG+ P L L + PP+L LG Sbjct: 361 IADLFLVHDRPIVRPLDDSVARVGHAGVELLRRARGFTPLPLPL---RIDAPPILALGGH 417 Query: 401 LKNTFCLVRGEQAVLSQHLGDL-SDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 LK+T L Q V+SQHLGD + +G + R AL L + ++ P+ + D HP Y Sbjct: 418 LKSTTALFFDGQVVVSQHLGDAHTAEGAALIERTALDLTR-LFRVRPERIACDLHPDYAG 476 Query: 460 SQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 S+ A ++ P V HHHAH AAC+AEH LD G V+ L DG G G +GALWGG Sbjct: 477 SRIAEQLAAAFRAPLVRVQHHHAHVAACVAEHG--LD-GPVLGLAWDGAGYGLDGALWGG 533 Query: 516 ECLRVN---YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ 572 E L V+ +R HL P LPGG+ A ++P R+ L + E A + Sbjct: 534 EALVVDGASFRRAAHLRSFP---LPGGERAMREPRRSALGLLWELLGEGARDHARAWFRD 590 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHG 631 L + RG +P +S GR FD VAA G S+EG+AA LE LA A+ Sbjct: 591 AELGPLFSMLARGTGSPRTTSVGRLFDGVAALAGLR-GAASFEGQAAMELECLAEAAGER 649 Query: 632 VTHPV-------TMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGF----AALM 680 +P+ MP V +D L ++R +A F A + Sbjct: 650 AGYPLPLRASAAGMPAV---IDFGPLLDAVLG-----DRRDGVSPGVIAARFHAALADVA 701 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 A G+ +V +GG N LL A + L + P+ P GDGGLSLGQ ++A Sbjct: 702 EALAAASGLGRVVLAGGCFQNALLAASIRERLTARGVEVFTPRLYPPGDGGLSLGQVLVA 761 Query: 739 AARWLAGE 746 A R E Sbjct: 762 ARRGTDAE 769 >UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGN1_9GAMM Length = 842 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 284/825 (34%), Positives = 402/825 (48%), Gaps = 102/825 (12%) Query: 1 MAKNTSCGVQLR----IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---ED 53 M+K + +Q R + G VQGVGFRPF++ LA+Q L G V N GV + ++ + Sbjct: 1 MSKKEAPKLQTRRLIEVCGIVQGVGFRPFIYLLAKQHQLQGWVLNHPQGVHIDVQGPENE 60 Query: 54 PETFLVQLYQHCPPLARIDSVEREPFIWSQL-----PTEFTIRQST---------GGTMN 99 + F+ + Q PPL++IDS+ + L P F+IRQS+ + Sbjct: 61 LDIFIKNIRQQAPPLSQIDSITCKSSAVHSLDDMPKPGVFSIRQSSLSLAKNKSNDTQFS 120 Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I D + C ACL ++ P R YRYP NCTHCGPRF+II A+PYDR T MA F +C Sbjct: 121 THISADFSICNACLDDIRDPNSRYYRYPLTNCTHCGPRFSIINALPYDRKNTSMADFVMC 180 Query: 160 PACDKEYRDPLDRRFHAQPVACPECGPHLEW-VSHGE---HAEQEAALQAAIAQLKMGKI 215 P C + Y DP +RR+HAQP++CP CGP ++W +S G ++ LQ A + ++ GKI Sbjct: 181 PECLQAYEDPANRRYHAQPISCPRCGPQIQWRMSDGSTSPSSDSMQVLQKAASAIRAGKI 240 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLP--------VADGLPDAARQL 267 +AIKGIGGFHL CDA N AV LR K+RP KPLA+M+ V G +A L Sbjct: 241 IAIKGIGGFHLVCDASNQKAVNKLRISKNRPLKPLAIMVKDRTQAQHYVQGG--EAEWAL 298 Query: 268 LTTPAAPIVLVDK-------------KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 L + PI L+ K + +L +IA ++ +G+MLP PL +LL + Sbjct: 299 LGSQQRPITLLQKHDALSLQSVSNKHNKILDLASNIAENVPYLGIMLPYTPLHYLLFDHI 358 Query: 315 QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EML 371 + LV TS N SG+P I + Q GF+ H R IV DDS+V SG +ML Sbjct: 359 ESALVFTSANYSGQPILIEGDDVATKFQHCIAGFIDHPRKIVNSCDDSLVHFSGGQRQML 418 Query: 372 RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL-----VRGEQAVLSQHLGDLSDDG 426 R RG+ P ALP PVL GA K +F L + QA++S ++GDL++ Sbjct: 419 RLGRGFAPYYFALPNTLTQ--PVLATGAQQKVSFALGAPQNEKQSQALISPYIGDLNNLE 476 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAA 482 +Q ++ + + ++ + D HP Y + +WA + + TV HH+AH + Sbjct: 477 MQQDYQHRVMSLTLLHQIKVAHYCCDKHPRYATHRWAHQQVNDNSADISTVPHHYAHVLS 536 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGE---------------NGALWGGECLRVNYRECEH 527 +AE+Q V+ + DG G+G+ N LWGGE L + + Sbjct: 537 VMAEYQLQ---QRVLGFSFDGTGLGDIDSTQHAHNPLTPSKNCTLWGGEVLIADIKNSHR 593 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-------NYSETASVQQQNWSVLAR 580 L A L GG+ A P R L A L + Q + + + Q +NW VL Sbjct: 594 CYSLKAFRLIGGEQAITSPARLLFALLLEYYSIKQIQMMHLSAFEKLGAHQLENWHVLW- 652 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 E+GIN+P SS GRF DA A L T+S+EGE LE LA + + Sbjct: 653 --EKGINSPYTSSIGRFIDAYCALLS-GLETISFEGECGLLLEQLALNEGNKNALSKREK 709 Query: 641 VDNQLDLATFWQQWLNWQAPVNQRAWAFHD-ALAQGFAALMREQATMRGITT-------- 691 L +L V +R A +L Q A+L+ Q + IT Sbjct: 710 SAPLFTLNAGEFDFLPLLKHVIERLTADKSTSLYQQGASLLFTQLSALIITISDQYPTLP 769 Query: 692 LVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQ 734 +V GGV NR+L + L T Q++P DGG++ GQ Sbjct: 770 IVLCGGVFQNRVLMDCVLSQLKRRKKTYYVSQTIPLNDGGIAAGQ 814 >UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Synechococcus elongatus RepID=Q31K38_SYNE7 Length = 770 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 299/773 (38%), Positives = 408/773 (52%), Gaps = 69/773 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 +LR++G VQG+GFRPFVW+LA++L L G V ND G ++ + + F +L P Sbjct: 13 RLRVQGVVQGIGFRPFVWRLARELGLTGWVNNDAAGAQIEVEGAIAQLQQFQQRLLVELP 72 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERRYR 125 R D +++E Q EF I S +T Q+ PD A C ACL E+ +RRYR Sbjct: 73 AAGRCDRLQQERLT-LQGDREFVIATSMASEQSTAQLPPDRAPCSACLRELWDLRDRRYR 131 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPF+NCT CGPR +I+R +PYDR T +A FPLCP C +EY+DP DRRFHAQP+ACP CG Sbjct: 132 YPFLNCTVCGPRASIVRQLPYDRNRTTLATFPLCPDCQREYQDPSDRRFHAQPIACPTCG 191 Query: 186 PHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L+ W + G+ A+++ +L AIA L+ GKI+A+KG+GGF L DA ++AV LR RK Sbjct: 192 PQLQLWDAQGQVLADRDRSLTEAIAALQQGKILALKGLGGFQLLVDACQTDAVQRLRDRK 251 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP KPLA++LP + + A +LL +PAAPIVL+ IAPD E+ Sbjct: 252 SRPHKPLALLLPDLEAVRQLCQISAAEAELLQSPAAPIVLLRAIASEPWLAAIAPDCCEL 311 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G+MLPA PL HLL ++ PLV TSGN SG P AL L IAD +L+H+R I Sbjct: 312 GLMLPATPLHHLLSRDFGQPLVATSGNRSGDPLCWDEVDALESLSAIADLWLVHDRPIAL 371 Query: 358 RMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 MDDSV R ++LRR+RGYVP +A+ P+L LG+ KNT + Q Sbjct: 372 PMDDSVTRIIDGQIQVLRRARGYVPTPIAIA---TPAEPLLILGSWQKNTPAIAADGQLQ 428 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT-- 472 L+ ++GDL + + ++ + +Q + P V DAHP + PT+T Sbjct: 429 LAPYVGDLESLAARDRRQQVIEHLQTVMGLQPTAWVADAHPDA-------PLLAPTETRS 481 Query: 473 ---VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE---CLRVNYRECE 526 V HH AH A AEHQ + L DG G G + +WG E C ++ Sbjct: 482 GWHVQHHLAHVLAVAAEHQLQ---PPFLGLAWDGSGWGLDQTVWGSEALICQTEGWQRWR 538 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-------VPEWQN-YSETASVQQQNWSVL 578 HL P L GGD AAK+P R+ LA + +PE Q +S T Q W L Sbjct: 539 HLQLWP---LLGGDRAAKEPRRSALALLWQLEGDRCWDLPELQTVFSPTERSLLQAW--L 593 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 +R +RG+ SS GR F+A+A +YEG+ A LE +P+++ Sbjct: 594 SR--DRGLK---TSSMGRLFEAIAWICRWQ-GDQTYEGQVATWLENQCDPQIVGDYPLSL 647 Query: 639 PRVDNQLDLATFWQQ-WLNWQAPVNQRAWA--FHDALAQGFAALMREQATMRGITTLVFS 695 + +D + Q W + QA ++ A FH +L Q AL A G+ ++ S Sbjct: 648 --TETGIDWRSLLQAVWCDRQADLSTAILATRFHRSLIQLVVAL----AQQAGLEPVILS 701 Query: 696 GGVIHNRLLR--ARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 GG NR L A A A F + Q LP DGG++ GQ + A W G Sbjct: 702 GGCFQNRFLLEGAIAALRSAGFQPYWAQQLPPNDGGIAAGQ--VLAVHWYGGS 752 >UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST Length = 770 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 251/768 (32%), Positives = 397/768 (51%), Gaps = 47/768 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 L + G VQGVGFRP +++LA+ + L+G V N G+ VE+ ++ +D + F+ Q+ +H P Sbjct: 7 NLLVDGIVQGVGFRPTIYRLAKVMKLNGYVRNMGNIVEIVVQGTYDDIKLFIDQIQEHKP 66 Query: 67 PLARIDSVEREPFIWSQLP---TEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGER 122 + I+++ + I Q +FTI S+ T ++P D + C CL E+ + Sbjct: 67 IRSEINNIHVD--IHEQTTPKYNDFTIVNSSNEISGTAVIPPDMSICDECLDEILDTNNQ 124 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 Y YPF CT+CGPRFTII +PYDR T M FPLC C++EY +PLDRR+HA+ CP Sbjct: 125 HYYYPFTACTNCGPRFTIIDEVPYDRKNTTMKKFPLCKHCNQEYTNPLDRRYHAEATCCP 184 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 +CGP + G+ ++ Q + + G I+AIKGIGG HL C +A+ LR R Sbjct: 185 DCGPEVYLYKDGKIPTRDPIRQTS-QLIDEGNIIAIKGIGGTHLVCKTSTDDAIEKLRER 243 Query: 243 KHRPAKPLAVMLP------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 R +P A M P + +++L + A PIV+++K L ++P+L+ Sbjct: 244 LGRKTQPFACMTPDIQTASLFVTYTQQEKEVLQSVAKPIVVLNKSPEYNLSPQLSPNLHN 303 Query: 297 VGVMLPANPLQHLLLQ-ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 GVMLP L HLL + L+ VMTS N+ G P I N++ L+ IAD +L+H+R I Sbjct: 304 QGVMLPYTGLHHLLFKYTLEPAYVMTSANMPGNPMLIDNKEITTKLEDIADYYLLHDRKI 363 Query: 356 VQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 + R DDSV+R +RRSRGYVP +L LG +L TF +++ + Sbjct: 364 LNRCDDSVIRFRNNKPSFIRRSRGYVPKPFDFTK-INTTKNILALGPELDVTFSILKEGK 422 Query: 413 AVLSQHLGDLSDDGIQMQWREALR-LMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 SQH+G+ S ++A++ L++ Y+V D HP + +++ A+E++ Sbjct: 423 CYPSQHIGNTSKYKTLEFMKDAIKHLLKLTRTDKIDYIVADMHPEFNTTKLAKELSKKYN 482 Query: 472 T----VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECE 526 T V HHHAHAA+ ++EHQ LD +++A+T DG+G GE+G +WGGE L +N E + Sbjct: 483 TELIQVQHHHAHAASLMSEHQ--LD--EMVAITADGVGYGEDGNIWGGEVLYLNNTGEYK 538 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV--PEWQN-----YSETASVQQQNWSVLA 579 + GGL +PGGDL+ K P R + + E +N YS+ ++ + Sbjct: 539 NHGGLTLQPMPGGDLSTKYPIRMAMGILYNIMDTEELRNLMKTDYSDYFKYGEKEVDITL 598 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + +E N SS GR D+++ LG + YEGE + LE++A + + Sbjct: 599 KQLENNFNTAQTSSMGRVLDSISVLLGIS-KNRGYEGECSMKLESVAREGFDLLKIEPIY 657 Query: 640 RVDNQLDLATFWQ------QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 + N L + + + +++ A A LA+ + + A + Sbjct: 658 EIKNNKTLINTSKLLYEVVKLMKSGVGIDEIACAAQRTLAEALSKIAINTAKAYNTKIIG 717 Query: 694 FSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAA 739 +GGV +N + + L + +T + + GDG +S+GQ IA Sbjct: 718 VTGGVFYNEYISKVVKETLTNEGYTYIQHKQTCPGDGSVSMGQCAIAG 765 >UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Veillonella RepID=D1BLR7_VEIPT Length = 759 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 263/754 (34%), Positives = 378/754 (50%), Gaps = 45/754 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP----ETFLVQLYQHCP 66 +R G VQGVGFRP V A L L G V ND GV V + + P + FL + P Sbjct: 14 IRYTGIVQGVGFRPLVSMCAHSLGLTGFVYNDSRGVYVEI-QGPLGALQLFLDAVQAEQP 72 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 L RI S + +F + S G +++T I D A C C+ E+ +RR Sbjct: 73 RLCRITSQTVQHLTVKGDEIDFIVAPSPLGESVSTFISADTAPCDDCIKELQQD-KRRRD 131 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR+TII+++PYDR T M FP+C C EY D RR+ A+P AC CG Sbjct: 132 YPFINCTNCGPRYTIIKSLPYDRERTTMNEFPMCEDCKAEYEDIEGRRYRAEPNACSRCG 191 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQL-KMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 P A + +L G I+AIKG+GG+HL CDARN AV LR RK+ Sbjct: 192 PQYTLYKPDRKAVDTVNIWNTTRELINEGSIIAIKGVGGYHLVCDARNDAAVQRLRKRKN 251 Query: 245 RPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLNE 296 RP KPLA+M+ D + D +LT PIVL++K + L +APD Sbjct: 252 RPHKPLAIMVGTLDMAIELVHINDVELDILTGMERPIVLLEKNHNSSVHLSSYVAPDNRM 311 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVMLP +P+ +LL +MTSGN SG +++QA +L +AD FL+HNR+I Sbjct: 312 LGVMLPYSPMHEVLL-PFDAAWIMTSGNKSGDSVLYNDDQAFNELGEVADYFLVHNREIY 370 Query: 357 QRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 +DDSVV +RRSRGYVP+ + G + +L +G+DLKN F + +G + Sbjct: 371 APLDDSVVVVINNKPRFIRRSRGYVPEPIHC-DGLEQT-SILAMGSDLKNAFAMNKGSEV 428 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLP 469 ++ H+GDL + ++ ++++ P ++ D+HP + SS+ ++ +L Sbjct: 429 LVGPHIGDLENISTHETLEWTIKRYKSLFSVQPDKIIIDSHPQFFSSRLGEKIGESFHLS 488 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAH A+ +AEH G V+ + +DG G G +G +WGGE L + + L Sbjct: 489 VVPVQHHHAHIASVMAEHNLR---GLVLGIAMDGTGYGPDGTIWGGEFLLCKGNQYQRLA 545 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN------YSETASVQQQNWSVLARAIE 583 + A LPGG+ A +PWR Q L ++ + Y E + W +L +A++ Sbjct: 546 HIHAAPLPGGEKAVSEPWR----QALWYIRNYYGDDIPFVYQEWMKELPKGWEILDKALQ 601 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN 643 + A+SCGR FD V A LG SY+ + A ALE L G +T + Sbjct: 602 SRMPMIQATSCGRLFDTVGALLGLG-MVHSYDAQIAIALETLCGDEKGSL--LTYHYDGH 658 Query: 644 QLDLATFWQQWLNWQAPVNQRAW---AFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 LD Q ++ RA +FH +A + I+ SGGV Sbjct: 659 ILDFTPTVQSIMDGVVRGECRAHLAASFHKTIAIALCETAADLMERYNISDAAMSGGVFQ 718 Query: 701 NRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 NR L + L +++P+ DGGL+LGQ Sbjct: 719 NRKLLEFIYRTWHIGNLYMNEAVPSNDGGLALGQ 752 >UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S327_ALTMD Length = 768 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 270/761 (35%), Positives = 402/761 (52%), Gaps = 43/761 (5%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVR---LREDPETFLV 59 K+ + +L I G +QGVGFRP V+ LA + ++ G V ND V + D E F+ Sbjct: 13 KSKTIAYELNITGVIQGVGFRPLVYCLAYEKSIVGWVQNDCGCVRIHAEGTELDVEQFVF 72 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM--NTQIVPDAATCPACLAEMN 117 L + L I +E++ S + + FTI++S I D C AC AE+ Sbjct: 73 DLLNN-GSLVSISLLEKKQVKLSNVDS-FTIKESGHDIACGAISIPKDVYLCGACKAELL 130 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 + RR Y FI C+ CGPRF+++RAMPYDR M+AFP+C C KEY+ P DRRFHAQ Sbjct: 131 SNTNRRGTYSFIACSKCGPRFSMLRAMPYDRKNMSMSAFPMCELCRKEYQSPTDRRFHAQ 190 Query: 178 PVACPECGPHLEWVSHGEHAEQEAALQAAIAQ---LKMGKIVAIKGIGGFHLACDARNSN 234 P++C CGP + + G + + L GKIVA+K IGG+HL CDA+++ Sbjct: 191 PISCRVCGPEVFCSTVGGRVVSQGDVDVVATVVAYLNQGKIVALKSIGGYHLLCDAQSTE 250 Query: 235 AVATLRARKHRPAKPLAVMLPV--AD-----------GLPDAARQLLTTPAAPIVLVDKK 281 AV LR RK+RP KP AVMLP AD + R LL +P PI+L K+ Sbjct: 251 AVDLLRQRKNRPDKPFAVMLPEPRADETSEDWLDKCVAVDSHQRALLLSPVRPILLAKKQ 310 Query: 282 YVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 + D++AP L ++GVMLP + L L++Q+ P+V TSGN+ G+P S A L Sbjct: 311 SNVPIADNVAPMLRDLGVMLPCSGLHLLIMQQFNRPMVATSGNIYGEPMVTSTSSAQQHL 370 Query: 342 QGIADGFLIHNRDIVQRMDDSVVR--ESGEM-LRRSRGYVPDALALPPGFKNVPPVLCLG 398 +AD F+ HNRDI ++DDSV+R +SG + +R RG P L+LP + P+L +G Sbjct: 371 SMLADIFVHHNRDIFHKLDDSVLRTLKSGTIPIRLGRGISPIELSLP--YTVQEPMLAVG 428 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 A+ KNT + + +++ H+GDL +Q + + + Q +Y PQ ++ D+HPGY+ Sbjct: 429 ANQKNTVAIALNNRLIVTPHIGDLDSPIMQAHFEKCISDFQALYHVHPQRILCDSHPGYI 488 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 SS+WA+ LPT VLHHHAHA+A + + DG G+GENG +WGGE Sbjct: 489 SSRWAKGSELPTTKVLHHHAHASAWALAAEISTPS---LVFVWDGTGLGENGEMWGGEVF 545 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 + + L + L GG+ QPWR+ A L + + QQ + Sbjct: 546 CGTPGNWKRVASLAPMKLQGGNKVPNQPWRS--AASLVWGTNFTGIDFKPFDPQQ---LS 600 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 A + +N ++SS GR FDA A A C + +SYEG+A LE++A++ V P+T+ Sbjct: 601 YNAWQNELNCHVSSSMGRLFDAAAFAC-CEQSEVSYEGQAPMMLESVASTPSKVM-PLTL 658 Query: 639 PRVDN---QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + ++ Q+D T + +++ RA FH +L + + + + Sbjct: 659 VQKNDEFIQMDWRTLVPELFDFKVSPQTRAANFHASLIETVWEVTLHCRKKFNFDHIGLA 718 Query: 696 GGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 GGV NR+L ++ +D ++ P SLP D +S+GQ Sbjct: 719 GGVFQNRILCDGISQRFLQSDIPVVIPSSLPLNDAAISVGQ 759 >UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3M0_NITSB Length = 703 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 255/741 (34%), Positives = 376/741 (50%), Gaps = 62/741 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCPP 67 +++ ++G VQGVGFRPFV++LA +L L G + N DGVE+ + E+ E FL L + PP Sbjct: 1 MRIFVKGIVQGVGFRPFVYKLANELGLAGFIRNCSDGVEIVIEGENEELFLEHLQSNLPP 60 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LA+I S++ + Q FTI +S G T + PD + C ACL ++ P RRYRYP Sbjct: 61 LAKIFSLKIQS-TPKQNFQSFTIIKSQEGQKETFLSPDISICDACLQDLFDPQSRRYRYP 119 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 INCT+CGPRFTII+ +PYDR T MA FP+C C +EY DP R FHAQP+ C CGP Sbjct: 120 LINCTNCGPRFTIIKDLPYDRKHTSMAKFPMCQECQREYHDPNSRFFHAQPIGCNSCGPE 179 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 L + E A+ A + + G+IVAIKG+GG+HL C +++ LR K RP Sbjct: 180 LFY----ESLSGYEAIGAVVKDILTGEIVAIKGVGGYHLVCLPKSA---YKLRQIKRRPK 232 Query: 248 KPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 KP A+M + + L+T+ PIV+V K ++ D+APD++ +GV L Sbjct: 233 KPFALMFKSIGKIKEVCHINEYEENLVTSKERPIVIVKAK---KIFADVAPDIDRLGVFL 289 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P +P+ +LL + PLV+TS N+S +P E +++ L +NR+IV+ DD Sbjct: 290 PYSPIYYLLFSLIDSPLVVTSANISDEPIVKDEE----NIKRFTQKVLYYNREIVRSCDD 345 Query: 362 SV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQH 418 SV + R SRGY P + L K +P +L +GA KNT L +LS H Sbjct: 346 SVLVGIDNRPLFYRLSRGYGPKSFYLS---KQLPAILAVGARQKNTISLGFANNVILSPH 402 Query: 419 LGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHA 478 +GD+ + + + + + IYDF+P+ VV D HPGY ++Q+A+ +++ T V HH A Sbjct: 403 IGDIKNIQSYNYFIQVIEDFKKIYDFSPEVVVCDKHPGYETTQYAKSLDITTVEVQHHLA 462 Query: 479 HAAACLAEHQW---PLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H A AE + PL + + DG G G++G +WGGE + R+ + Sbjct: 463 HIYAAKAEMELTHHPLSQNLFLGFSWDGTGYGDDGKVWGGEVFVGDERKYH----FDYLK 518 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 + GG+ A K L+A L + Y V+ + + + A E+ IN SS G Sbjct: 519 IAGGEKAIKDI--RLIAWSL-----LKKYG--FEVEDKLFHL---AYEKNINCFETSSVG 566 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWL 655 R FDAVA G YEG +E + R+ + Sbjct: 567 RLFDAVAFLAGLCTYQ-EYEGYTGLLVEKAYQAREDRYEFYIHDRMIT-----------I 614 Query: 656 NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADF 715 ++ + + + A++ E A R ++ SGGV N+ L L Sbjct: 615 DFLSLIKDKKADIPAKFLNTLTAIIVEIAK-REKLPVILSGGVFQNKTLLENTIKKLQQN 673 Query: 716 TL--LFPQSLPAGDGGLSLGQ 734 ++ FP +P DGG+SLGQ Sbjct: 674 SIPYFFPTQIPINDGGISLGQ 694 >UniRef50_O28905 Hydrogenase expression/formation regulatory protein (HypF) n=1 Tax=Archaeoglobus fulgidus RepID=O28905_ARCFU Length = 740 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 280/778 (35%), Positives = 414/778 (53%), Gaps = 82/778 (10%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPPL 68 ++ +RG VQGVGFRPFV ++A ++ L G V N GDG VE+ + +PE FL L + PPL Sbjct: 3 KITVRGVVQGVGFRPFVHRIASRMGLRGYVRNTGDGSVEIVVDRNPEEFLNILLKERPPL 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 I+ ++P F I +S G ++ + PD A C CL E+ RRY YPF Sbjct: 63 VVIEDFSVAK-TNGEIPETFRIVESGGKSLLSLPPPDVAVCDKCLEEVLDSKNRRYLYPF 121 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 +CT CGPRFTI +++P+DR T +A FPLCP C KEY D DRR+ AQ +ACP CGP Sbjct: 122 TSCTDCGPRFTISKSLPFDRENTSLADFPLCPDCRKEYGDIKDRRYFAQTIACPRCGPQY 181 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +V G E + A L GKI+AIKGIGG+H+AC + + V LR +RP + Sbjct: 182 RFVWKG----GEGGIGDAANALDSGKIIAIKGIGGYHIACLTED-DVVLRLRKLLNRPQQ 236 Query: 249 PLAVML-------PVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 P AVM+ VA+ L + R L +PA PIV+V KK +P + +AP+L+ +G+ML Sbjct: 237 PFAVMVRDLSSAERVAE-LSNEERAELLSPARPIVVVRKK-LP--FEAVAPELDTIGIML 292 Query: 302 PANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P PL HLL QEL+ LVMTS NL G+P I +E + ++ DGFL+HN +I R+D Sbjct: 293 PYTPLHHLLFQELKADYLVMTSANLPGEPMYI-DESIMEKME--LDGFLVHNLEIANRVD 349 Query: 361 DSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ G ++RRSRG+VP + + GF + +GA+L N+ L++ +AV+SQ Sbjct: 350 DSVVKYVGGRRLLIRRSRGFVPQPIKIDIGFN----AIAVGAELYNSIALLKEGKAVVSQ 405 Query: 418 HLGDLSDDGIQMQ-WREALRLMQNIYDFTP-QYVVHDAHPGYVSSQWA----REMNLPTQ 471 ++G+ ++ + ++ A++ + Y++ D HP + ++ +A +E++ Sbjct: 406 YIGNTANFRTYNEFFKRAVKFFARYMNLEKIDYIISDMHPLFNTTNFAEKLSKELSCRHI 465 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE--CEHLG 529 V HH AHA + +AE +A+T+DG+G G +G +WGGE L ++ + E G Sbjct: 466 KVQHHFAHALSVMAEKGLE----RAVAITVDGVGYGMDGKVWGGEVLLIDLEKGRFERRG 521 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 L L GGD A +P R + L+ ++Y + V++ L +A+ + Sbjct: 522 RLETFGLIGGDAATYRPLR-IAVSLLKRHELLEHYCKYEDVER-----LIKALPLAVK-- 573 Query: 590 LASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMPR-------- 640 +S GRF DAV+A L C T YEGE A LEA AA H V + R Sbjct: 574 -TTSVGRFLDAVSAMLEVCLERT--YEGEPAMKLEA-AAEPHEVEVKPEIERRRETCVYN 629 Query: 641 --VDNQ--------LDLATFWQQWLNWQAPVNQRAWAFHDAL---AQGFAALMREQATMR 687 D + L L F+ + + R ++A+ A+G + + A R Sbjct: 630 SPFDTEGRQGEIKVLMLRDFFTRCMERYLEGEGRGKIAYEAIAYVARGLGEIALDAA--R 687 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L+ SGGV +NR + + ++ P P GD G+SLGQ I A + L G Sbjct: 688 NCKILI-SGGVGYNRYFLREVERVCGE--IVVPSLYPLGDNGISLGQ--IYALKALEG 740 >UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Actinomycetales RepID=Q0RPQ5_FRAAA Length = 824 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 314/802 (39%), Positives = 397/802 (49%), Gaps = 86/802 (10%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLARI 71 G VQGVGFRP V +LA L L G V ND V + DP FL +L PPLARI Sbjct: 27 GIVQGVGFRPHVHRLASGLGLTGFVGNDSASVFAEVDGDPADVAEFLRRLAPSAPPLARI 86 Query: 72 DSVEREPFIWSQLPTEFTIR---QSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 D + + P R T + PDAA C CL E+ P +RR+R+PF Sbjct: 87 DGITVTDVPGTPRPGGAGFRIVASRAAAGARTLVPPDAAVCADCLRELFDPADRRHRHPF 146 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I CT+CGPRFTII A+PYDR T MA FP+C C EY DP DRRFHA+P+ACP+CGP L Sbjct: 147 ITCTNCGPRFTIIEALPYDRAATTMARFPMCARCTAEYTDPADRRFHAEPIACPDCGPRL 206 Query: 189 EWVSHGEH---AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 W S + +AAL AA L G +VA+KG+GG+HLAC A + + LR RK+R Sbjct: 207 -WFSPLDGPAVTGTDAALAAAQRALAAGAVVAVKGVGGYHLACRAEDDEGLTRLRGRKNR 265 Query: 246 PAKPLAVMLPVADGLPDAAR---------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 P +P AVM A L AAR LL+ PAAPIVL + L +AP Sbjct: 266 PDQPFAVM---ARDLATAARVGTVSPAVAALLSGPAAPIVLTGRAPGAPLSALVAPGSPL 322 Query: 297 VGVMLPANPLQHLLLQELQCP------LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 VG++LP PL HLL LVMTS N SG+P + +A L G+AD FL Sbjct: 323 VGLLLPYTPLHHLLFAPAPGGGPPPRLLVMTSANRSGEPICFDDREARTRLAGLADAFLT 382 Query: 351 HNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I+ DDSV+R E LRR+RG+VP + LP + V PVL +G +LKNT CL Sbjct: 383 HDRPILAPCDDSVLRCDAEQVVPLRRARGHVPLPVDLP---RPVGPVLAVGGELKNTLCL 439 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM- 466 G +A+LSQH GDL + + + +Y P + D HPGY + WAR Sbjct: 440 TTGRRAILSQHHGDLGSLAAMAAFERSGARLARLYGIEPAVLAADPHPGYATRAWARRTA 499 Query: 467 --NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NY 522 P + V HHHAH AA LAEH G V+ + DG G G++G +WGGE L V + Sbjct: 500 GAERPLRLVQHHHAHVAALLAEHGR--LGEPVVGVAFDGTGYGDDGTIWGGEVLLVGSDV 557 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-NYSETASVQQQNWSVLARA 581 E + L V LPGGD A + P R LA W + + + S + A Sbjct: 558 TRAERVAHLRPVGLPGGDAAVRNPCRVALAHLAAAGLAWSADLAPVRACSAAELSTVRTA 617 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL----------EALAASCHG 631 ++RG+ +SS GR FDAVAA LG T +Y +AA L E LAA G Sbjct: 618 LDRGVACTPSSSMGRLFDAVAALLGVRQRT-TYAAQAAVELEALAAEAPTAEGLAAGRSG 676 Query: 632 VTH-------------------PVTMPRVDNQLDLATFWQ---QWLNWQAPVNQRAWAFH 669 T P+ D L+ A L A AFH Sbjct: 677 DTGGPSAGTAAAGRAAAGVGAWPLVFGLADGVLEPAPVLAGLVDGLRAGMAAGTLAGAFH 736 Query: 670 DALAQGFA-----ALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLP 724 A+A A R + G+T VF+ V+ A F +L Q +P Sbjct: 737 VAVADAVTRVAEVARRRHGVGLVGLTGGVFANVVLLRACR---ARLAAAGFDVLVHQEVP 793 Query: 725 AGDGGLSLGQGVIAAARWLAGE 746 AGDGGL+LGQ V+AA LAG+ Sbjct: 794 AGDGGLALGQAVVAA---LAGD 812 >UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Clostridium thermocellum RepID=A3DJT3_CLOTH Length = 753 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 259/768 (33%), Positives = 378/768 (49%), Gaps = 46/768 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FL 58 K+ S ++ + G VQGVGFRPFV +A++ + G V N G VE+ L+ E FL Sbjct: 4 GKSKSITKRITVSGIVQGVGFRPFVHNIAKKHGIPGTVRNIGGLVEIILQSSEEKYNEFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 L + P + I ++E E + F I +S + I PD C +C E+ T Sbjct: 64 QDLKANAPVGSEITNIETEDIKEREFDG-FRIIESKDDEEISIIPPDLPVCESCERELFT 122 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 +RR+ PFI+C CG R+TII +PYDR T M F +CPAC +EY P +RRFHAQ Sbjct: 123 GTDRRFLNPFISCMSCGARYTIIEELPYDRHNTTMRDFDMCPACREEYTSPRNRRFHAQT 182 Query: 179 VACPECGPHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 ++C +CGP+L + ++ G ++ A AA ++ G I+A+KGIGG+H AC + V Sbjct: 183 ISCNDCGPYLIFNDLTGGSELTEKDAFHAAANIIESGGIIAVKGIGGYHFACSPFLEDTV 242 Query: 237 ATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLV---DKKYVPELC 287 LR K R AKP A+M D + + +LL + A PIVL+ + P C Sbjct: 243 LRLRELKGREAKPFAIMFESVDSIRKYCVVSEKEEELLKSKARPIVLLYLKNNSMAPSAC 302 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 G LP PL H+LL + PL+MTS N+S KP + + L+ + +G Sbjct: 303 QGSI----YCGAFLPYTPL-HMLLVKRCGPLIMTSANISDKPIIKDDSEMLSLKSPLLNG 357 Query: 348 FLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L + R IV+ +DDS VV S +++RRSRGYVP + L K++ + G+DLK Sbjct: 358 VLYNKRRIVRSVDDSVAKVVANSPQLIRRSRGYVPYPVFLKNRKKDL-QIFAAGSDLKAA 416 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 FCL + AV+SQ+ GDL + + +++ + R + ++ TP V D HP Y SS++A Sbjct: 417 FCLYKNGNAVMSQYFGDLEEKTVLERYKASFRDLCHLLKITPDIAVCDMHPNYHSSRFAE 476 Query: 465 EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 + +P V HHHAH A+ +AEH VI + DG G G +G +WGGE L E Sbjct: 477 NLGIPLTYVQHHHAHVASVMAEHHLK---EQVIGVAFDGTGYGTDGKIWGGEFLICEGAE 533 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIER 584 + + L + + GGD + + + A C Y V+ + ++ A++ Sbjct: 534 FKRVAHLRYIPVLGGDSSMRDAAKT--AACFLLNLGLDQY-----VKDERKDIIKAALKN 586 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL--EALAASCHGVTHPVTMPRVD 642 IN SS GR FDAV++ L YEGE A L EA+ A H + + Sbjct: 587 NINTVPTSSMGRLFDAVSSLLEIQYEN-RYEGECAAMLEKEAVLALRHKIEPKKLAFEIK 645 Query: 643 NQLDLATFWQQ-------WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + DL + L + A FH A+A + + I T+ S Sbjct: 646 RKSDLIEIDPKPMLKSMCHLQNKDDTGSLALGFHYAVADMILEVCEIIRAEQKINTVALS 705 Query: 696 GGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GGV N LL R L D F + + S+P DG + LGQ I R Sbjct: 706 GGVFQNTLLMERTLKILRDRHFNVYYNMSVPPNDGSIGLGQTFIGLVR 753 >UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F0N3_9HELI Length = 770 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 254/773 (32%), Positives = 395/773 (51%), Gaps = 68/773 (8%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPP 67 L + G +QGVGFRPFV+++A + L G V N+ GV++ ++ E + FL +L ++ P Sbjct: 6 LNLTGTIQGVGFRPFVYKIATKYFLKGYVLNNNQGVKILIQGNQESIQNFLKEL-KNPPS 64 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRY 126 A+I S+ ++ ++ ++F I++S ++ T +P D A C C+ E+ P +RR+ Y Sbjct: 65 AAKITSITQKKIPNKKIFSDFEIQKSQTHSIKTATIPADLALCQECINELFNPKDRRFLY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI+CT+CG R+++I ++PYDR T MA F +C C +EY + RRFH++ CP CGP Sbjct: 125 PFISCTNCGGRYSLIHSLPYDRQNTAMANFKMCKICQQEYTNSNSRRFHSEINCCPNCGP 184 Query: 187 HLEWVSHGEHAEQEAA--------------LQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 + + +H + ++ ++ AIA LK GKI+A+KGIGG+ L CDA N Sbjct: 185 QVFFTTHLNYNDKPLLDSQIIPFLKTTPNPIKNAIAALKNGKILALKGIGGYALICDATN 244 Query: 233 SNAVATLRARKHRPAKPLAVM---LPVA---DGLPDAARQLLTTPAAPIVLVDKKYVPEL 286 ++ LR RK+RP KP A+M L +A L + LLT+ APIVL K +L Sbjct: 245 QESIQILRDRKNRPKKPFAIMCKDLKMAMSFASLNKKEKNLLTSQIAPIVLSYAKTKNKL 304 Query: 287 -CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 IAP+L +G++LP PL +L+ E++ PL+ TS N+SG+P LQGI Sbjct: 305 PLHLIAPNLATLGIILPYAPLHYLIFNEIEFPLIFTSANISGEPIIKDFYTITQKLQGIC 364 Query: 346 DGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDA-LALPPGFKNVPPVLCLGADL 401 DG L++NRDI +DDS++R + ++LRR+RGY+ D + P KN + LGA Sbjct: 365 DGVLLYNRDIFNPIDDSLIRILNKKTQILRRARGYLSDIPFSTPHTQKN---FIALGAQQ 421 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K+TFCL + +LS HLGDL++ + +++ L L Y D HP Y + Sbjct: 422 KSTFCLKFHNKLLLSPHLGDLNNLESFLNFKQNLNLFTQQYQAKIDTFCADLHPNYAYKE 481 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 N T + HH AH + +AE++ +V+ + DG G G +G +WGGE L N Sbjct: 482 LLPSKN--THFIQHHFAHLLSNIAENRI---SSEVLGVIFDGTGYGLDGNIWGGEFLFYN 536 Query: 522 YRE---CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE------TASVQQ 572 ++ + + L GG++A K R L + L FV ++Y + + Sbjct: 537 PKKPLTFQRIASFAPFYLLGGEVAIKD-IRRLGIEAL-FVAFKEHYKTLKLPLLESLKKD 594 Query: 573 QNWSVLARAIERGINAP--LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA--- 627 +L ++ N +S GR FD VA+ T SYEGE LE+LA Sbjct: 595 YGKDILTFFYKQHQNTQNYTCNSVGRIFDMVASLCNLTQKT-SYEGEGGMLLESLAYKAQ 653 Query: 628 --SCHGVTHPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMRE 682 +++ + + N + T Q+ L + P+ A FH LA ++ + Sbjct: 654 KNKIQAISYSFAIKK--NIILWDTMIQEIYYDLQNRIPIENIALNFHFTLANIIKHIVNQ 711 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQG 735 T+ SGG N +L L + + Q +P DGG+S GQ Sbjct: 712 YE------TIALSGGCFQNAVLTQLTLQILKNKKVFLNQEIPCNDGGISFGQA 758 >UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota RepID=D1YUL8_METPS Length = 747 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/758 (35%), Positives = 395/758 (52%), Gaps = 50/758 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 V++ RG VQGVGFRPFV LA +L G V N G VEV D + F V+ + Sbjct: 4 VRILARGIVQGVGFRPFVHNLAVAHSLSGHVKNLGTSVEVVAEGKDADVDAF-VEGMRRG 62 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 P L+RIDS++ +S +F I +S+ I PD C CL +M GE R++ Sbjct: 63 PKLSRIDSLDVSEEPYSGDYRDFRIEKSSASGFGGFIPPDTGICNNCLEDMR--GESRFK 120 Query: 126 -YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 Y +C CGPR+ I+ +PYDR T M FP C C ++Y+DP +RR+HAQ +CP+C Sbjct: 121 DYWAASCVDCGPRYAIMDTLPYDRDNTTMTDFPFCEDCLRDYKDPKNRRYHAQGFSCPKC 180 Query: 185 GPHLEWVSHGEHAEQEA-ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP L +GE + A ++ I L G+I+AIKG+GGFHL C + LR R+ Sbjct: 181 GPRLYL--YGEDRKPLAPPVEETIRLLNEGRILAIKGVGGFHLCC---KMDVTPLLRQRR 235 Query: 244 HRPAKPLAVM--LPVADG---LPDAARQLLTTPAAPIVLVDKKY-VPELCDDIAPDLNEV 297 +RP +P A+M LPV + + + R LL + PIVL+ +K+ VPE +AP L+ V Sbjct: 236 NRPEQPFALMAPLPVIEKYAHVNEGERGLLDSMQRPIVLLRRKHGVPE---SVAPGLHTV 292 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G M P HLL +++ PL+MTS NL +P NE+A L+GIAD +L+H+R I+ Sbjct: 293 GFMTPYTGFHHLLFKDIGEPLIMTSANLPSEPMVKDNEEAFRRLKGIADYYLLHDRRILN 352 Query: 358 RMDDSVVRESGEML--RRSRGYVPDALALPPGFKNVPP-VLCLGADLKNTFCLVRGEQAV 414 R DDSV+R + M R +RGY P A+ P K+ P +L +G +L ++ + + Sbjct: 353 RCDDSVLRYNDGMFFTRMARGYAP---AMFPMKKSSPKAILAMGPELNSSVSIYKDNLCY 409 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPT 470 S HLG +++ RE + + + TP+ VV D HP ++SS+ RE+ Sbjct: 410 TSHHLGHINNPLALDFLRETVDRLLKMTKVTPEIVVTDMHPSFLSSRLGRELAQQFKADV 469 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 TV HH AH + + E ++ DV+ + +DG+G GE+G +WGGE + H G Sbjct: 470 VTVQHHRAHIGSLVVEG---VELEDVVGVAMDGVGYGEDGTVWGGEI----FHGGAHPAG 522 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS-ETASVQQQNWSVLARAIERGINAP 589 L V +PGGDLA K P R + V E + A++ V+ + +ER +N Sbjct: 523 LLPVPMPGGDLATKFPMRMVAGILYGSVDEGRLLRIMEANMGPTEAQVILKQVERKVNVA 582 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASCHGVTHPVTMPRVD--NQL 645 +SS GR D+VAA LG +YEGE A LE+ A + V P + R+D N + Sbjct: 583 YSSSAGRVLDSVAALLGVC-YRRTYEGEPAMKLESFAFPGDANKVDLPCDIIRMDGRNVV 641 Query: 646 DLATFWQQWLNWQAPVNQR---AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 D + + ++ R A + +LA+ FA A G + SGGV N Sbjct: 642 DSRSLLRAVVDAMDEGKNRHDIAASAQVSLARAFAEQACRAAKKSGAPVVGLSGGVAVNA 701 Query: 703 LLRARLAHYLADFTLLF--PQSLPAGDGGLSLGQGVIA 738 + + Y+ L F LP GDGG+S GQ V+A Sbjct: 702 AIGRTIEDYVKSEGLKFVTNHKLPCGDGGVSFGQAVLA 739 >UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax=Campylobacter RepID=B9KGD4_CAMLR Length = 732 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 244/760 (32%), Positives = 361/760 (47%), Gaps = 70/760 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQH 64 G ++ I+G VQGVGFRPFV+ +A++LNL G+V N+ GV + L ++ E F +L+ + Sbjct: 5 GYEIHIKGLVQGVGFRPFVFNIAKELNLKGEVYNNSLGVVIILECSNDELEIFKEKLFAN 64 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLARID + EF+I S + I+ D A C C E R+ Sbjct: 65 LPPLARIDDFNFSYKKLQKTYNEFSISTSQDSEKFSPILSDFALCEDCYNEFYDEKNPRF 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +YPFI CT+CGPRF+II+ +PYDR T M F +C C EY DP +RRFHAQP++CP+C Sbjct: 125 KYPFITCTNCGPRFSIIKKLPYDRVNTTMNEFKMCSFCQSEYDDPTNRRFHAQPLSCPKC 184 Query: 185 GPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 + ++ A+ E A L+ GKI+A KG+GGFHL CD+ N NA+ LR R Sbjct: 185 KITIFLKDKNQNILAKDEKAFILLAKLLEEGKIIAFKGMGGFHLICDSTNKNAINELRIR 244 Query: 243 KHRPAKPLAVM---LPVADGLP---DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K+RP KP A+M L +A L +A +LLT+ PIV+++ K + + +APD N+ Sbjct: 245 KNRPKKPFAIMVKDLKMAQELAFINEAEAKLLTSNLKPIVILNSKNIHK---SLAPDTNK 301 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ML +L + + P++ TS NLS + + L L + D +L ++R I Sbjct: 302 IGIMLAYMGTHLMLFEHFKKPIIATSANLSSQSIIYEETKLLEQLSDVFDFYLDYDRAIY 361 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 DDS+ + G+ LR SRG P + F +L LG++LKN F Q Sbjct: 362 NSSDDSIAQVIGKEVMFLRTSRGLNPLYINTAGIFNAKENILALGSELKNEFACFFKNQI 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NLPTQT 472 +S ++GD+ IQ ++ + L QN Y ++ D HP + + +E + Sbjct: 422 FISPYIGDMKSLDIQERFFKILTFFQNSYKLNFDQILSDKHPQF---NYVKEFKDYKNFR 478 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH+AH ACL EH+ + DV+A DG G G++G +WGGE R N + E L Sbjct: 479 VQHHYAHLCACLFEHK--IYKNDVLAFVFDGTGYGDDGKIWGGEIFRANLKSYERLNHFK 536 Query: 533 AVALPGGDLAAKQPWRNL-LAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 L D+ + NL LA F E + A Q + L + + + Sbjct: 537 NFKLINADI---KNIANLALALIFDFNLESKASEFLAKFSQVKLNNLKKIHTQS--SLYT 591 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW 651 SS GR DA A L YE + +E D LD Sbjct: 592 SSLGRIIDAF-GAFAFDMQKLDYEAQIGLLME---------------KYYDKNLD----- 630 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQAT---MRGITTLVFS------------G 696 N++ + ++ F +A Q + + + + GI L+ G Sbjct: 631 ---YNYKFDIYEKEICFKNAFLQALEDKDKVKISTGLLNGIANLIIEYSKDFKEEVLLCG 687 Query: 697 GVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 GV N+ L L +F P D ++LGQ V Sbjct: 688 GVFQNKTLLEILVR--KNFAYKTSLQFPCNDSSIALGQLV 725 >UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU5_KOSOT Length = 747 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 261/762 (34%), Positives = 385/762 (50%), Gaps = 69/762 (9%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGV-------EVRLREDPETFLVQLY 62 ++ I G VQGVGFRPFV LA+ L LHG V N GV E +LRE F+ L Sbjct: 8 EIMINGIVQGVGFRPFVATLAEDLGLHGYVENCESGVRIVLDCDETKLRE----FIEILN 63 Query: 63 QHCPPLARID--SVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 + P A+I S ++ +++ I G +NT I PD A C C+ EM + G Sbjct: 64 ERKPMPAKIRELSFSKKAVKTNKIRGFRIINSKKTGKINTSIPPDIAMCDKCIGEMFSKG 123 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRY YPF NC CGPRF+I +PYDR T M F +C C+ EY + D R+HAQ Sbjct: 124 NRRYLYPFTNCARCGPRFSIAYVLPYDRDKTSMDDFSMCHDCNTEYTNLRDWRYHAQTNC 183 Query: 181 CPECGPHLEWVSH------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 C +CGP W+ H E A++ AI ++ G VAIKGIGG HL C + + Sbjct: 184 CEDCGPKY-WIVEIIKNEIVSHFSGEEAVKQAIGIIRAGGTVAIKGIGGIHLVCKP-DPD 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCD 288 A+ LR K RP KP A+M + + A +LL +PA PIVL+ K+ ++ Sbjct: 242 AIKKLRNLKDRPRKPFAIMAKDLETVKKFAYVGEVEERLLLSPARPIVLLRKR--GDIFY 299 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 D++P + +GVMLP + +LLL++ LVMTSGN+SG+ N +AL L ++DG Sbjct: 300 DVSPGFHTIGVMLPYTGIHYLLLEDFFV-LVMTSGNISGEMLCADNFEALTKLSKLSDGL 358 Query: 349 LIHNRDIVQRMDDSVVRE-SGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L+H+R IV R DDSV++ +G+ +R+SRG++P+ + +P + P +L GADLK++F Sbjct: 359 LLHDRKIVNRCDDSVIKVLAGKPVFVRKSRGFIPEVIKIPLRNRKHPEILATGADLKSSF 418 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----Q 461 R E SQ+LGDLS Q+Q+++ L+ + ++D + VV D HP Y S + Sbjct: 419 GFFREESFYGSQYLGDLSYYINQVQYQKMLKRFEKLFDLHARVVVTDLHPDYFSKTLGEE 478 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 +A + + HH AH + +AE I + DG G G +G +WGGE ++ Sbjct: 479 YAENRDCEIYSCQHHVAHIYSVMAEKALK----KCIGVAFDGTGYGFDGKIWGGEFFSID 534 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARA 581 +C L + +P G+LA ++P L+A E A + + Sbjct: 535 NSKCMRFAHLRYIPMPSGELAIEKP--ELMAYAYLIDSGVDLKDEKAHLLYE-------- 584 Query: 582 IERGINAPL-ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----SCHGVTHPV 636 NAP+ SS GR FDA AA L ++EGEA LE++A S V Sbjct: 585 -----NAPVKTSSAGRLFDAAAAVLDVCKEN-TFEGEAPMKLESVAKRHSESFSWVLDKS 638 Query: 637 TMPRVDNQLDLATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 +P Q+D ++ + + +++ A FH LA+ + + E + G + Sbjct: 639 ALPW---QIDFRKMIRELYSEKDKNSISELASKFHRTLAEAISVVCGEIKKLTGEKNVCL 695 Query: 695 SGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 SGGV N+LL L F + F + + D G++ GQ Sbjct: 696 SGGVFQNKLLLEVAVALLEKKGFNVWFNEKVSPNDEGIAFGQ 737 >UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Campylobacter RepID=A0RPH2_CAMFF Length = 741 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 238/759 (31%), Positives = 377/759 (49%), Gaps = 40/759 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 +++ I G VQGVGFRPF++ LA++ + G V ND GV++++ D E F ++ Sbjct: 3 SLKIEIYGLVQGVGFRPFIYYLAKKFGIFGRVFNDSQGVKIQIYADDEACDKFCKAIFDE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLARID + +S +F I +S I+PD A C C E +RR+ Sbjct: 63 LPPLARIDDFKVTG--YSFKFDDFKIIESKQALKTAPILPDFAICDECKREFYDKDDRRF 120 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +PFINCT+CGPRF+II+++PYDR T M++F +C C EY +P +RR+HAQP++C C Sbjct: 121 HHPFINCTNCGPRFSIIKSLPYDRKNTTMSSFAMCDECKNEYSNPYNRRYHAQPISCKTC 180 Query: 185 GPHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP + + + A E A++ +LK GKI+AIKGIGGFHL CDA N A+++LR R Sbjct: 181 GPKVSFKNLDGIVLANDEEAIRLCANELKSGKIIAIKGIGGFHLVCDATNQKAISSLRER 240 Query: 243 KHRPAKPLAVMLP------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K+RP KP A+M + + + LT+ PI+L+ K + L ++A +L + Sbjct: 241 KNRPDKPFAIMCKDIQMASLVAYINEFEEDALTSNIKPIILLKSKEI--LPANLALNLKK 298 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ LP L LL + + P++ TS N+SG+P I E L + DG L ++RDI+ Sbjct: 299 IGIFLPPTSLHLLLFEYIDFPIIATSANISGEPIIIDFESISKKLIKVCDGALDNDRDIL 358 Query: 357 QRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 DDS V + LR SRG P + F L +G++LKN F + + Sbjct: 359 NPSDDSIAFVYQSYLAWLRTSRGIKPKIIH--SKFDKKGCFLAIGSELKNQFAIYKDGLI 416 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 S ++GDL + ++ L + Y+F ++V+ D HP ++ ++ + V Sbjct: 417 FSSAYIGDLKNKATFDRFLMVLDMFVRTYEFKFEFVIADKHPYFLHTKHFAKQGFTVHKV 476 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH+AH + E+ V+ DG G G++ +WGGE + + E + Sbjct: 477 QHHYAHILCVMLENDIT---DSVLGFGFDGTGYGDDSHIWGGEVFICDTKNYERVAKFDD 533 Query: 534 VALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 L GGD A K + + ++ + + YS+ Q N L + ++ GIN S Sbjct: 534 FDLIGGDNAIKNIYYLTYSILCKYNIDAPKFYSKFEQNQLLN---LDKVMKSGINIIKTS 590 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 S GR FDA A L +SY+ +AA LE+L +++ + + ++ + Sbjct: 591 SLGRIFDAF-ACLVLGINKVSYDAQAAMELESLYDDTIDISYDFCIND-----GIISYKE 644 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 +L + A G A L+ E A + +V GGV N L R+ L Sbjct: 645 PFLRALSDSPSVAAT---GFINGIANLILELAELYK-KPVVLGGGVFQNEALLKRVILNL 700 Query: 713 ADFTLLF--PQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 ++ F P+ P D +++GQ + ++L N Sbjct: 701 NKNSIFFYLPKDEPVNDSSIAMGQ-IYFGLKFLGYNANN 738 >UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXT8_9CORY Length = 760 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 285/765 (37%), Positives = 384/765 (50%), Gaps = 83/765 (10%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF---LVQLYQHCP 66 +L I G VQGVGFRP Q A+ + G V N GV V + P+ L + P Sbjct: 32 RLTIYGVVQGVGFRPHAVQKARLHAVTGWVTNTDAGVIVEAQGAPDEVDRALADITTDLP 91 Query: 67 PLARID--SVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PLA I +V+ I + + I GT T + PD C C E + P RRY Sbjct: 92 PLAFISYTNVQSITPINGENSSFSVIPSHRDGTAKTLLPPDTTMCEDCRREFHDPENRRY 151 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPFI CT+CGPR TIIR +PYDRP T MA FPLCP C++EY DP +RR+HAQP++C EC Sbjct: 152 HYPFITCTNCGPRLTIIRDLPYDRPRTTMAEFPLCPDCEREYTDPDNRRYHAQPISCYEC 211 Query: 185 GPHLEWVSHGE--------HAEQEAALQAAIAQL-KMGKIVAIKGIGGFHLACDARNSNA 235 GP W+ + E E L+ +++L G IVA+KGIGGFHL CDARN Sbjct: 212 GP-TAWLEYDEPNLAPEKLTRENVETLKEKVSKLFDSGAIVAVKGIGGFHLMCDARNEET 270 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 V LR RK RP KP AVM+P P A AAPI LV+ P L + P L+ Sbjct: 271 VEKLRQRKQRPDKPFAVMVPRTSE-PQTA-------AAPIELVNDFDEP-LAPSVNPRLS 321 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQAL-----ADLQGIADGFLI 350 VG+ P +PL L+ PLV TSGNLS +P +N+ A A + +AD L+ Sbjct: 322 RVGIFSPYSPLHELICDR---PLVATSGNLSSEPLITTNDDARRFLGPAARRPLADALLL 378 Query: 351 HNRDIVQRMDDSVVRESGEM-LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 H+R I ++DSVV G + +RRSRG+ P + L PG + VL +G D+KNTF L Sbjct: 379 HDRPIHLPVEDSVVL--GRLPIRRSRGFAPLPVQL-PGTRR---VLAVGGDMKNTFTLTT 432 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNL- 468 A +S H+G++ + +R +L ++ + P+ +V D HP + ++ A E+ L Sbjct: 433 SSFAHVSPHIGEMHSLAARKAFRTSLAQLRALTGADPELIVCDMHPDFATADIADELALS 492 Query: 469 ---PTQTVLHHHAHAAACLAEHQ--WPLDGG------DVIALTLDGIGMGENGALWGGEC 517 P V HHHAHA + LAE+ + D G V TLDG G G + +WGGE Sbjct: 493 LGVPLVAVQHHHAHALSLLAENPALYRADSGPQTPTPTVAVATLDGTGYGTDATIWGGEI 552 Query: 518 L-----RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ 572 L R + H LP L GGD A K P R L C +W + A + Q Sbjct: 553 LLLGPDRTTFTRAWH---LPTFRLVGGDAAVKSPHRIALGLCR----DW-GLASPAPIPQ 604 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG- 631 S ++R I SS GR FDA A +G ++YEG+AA EALA + Sbjct: 605 VELS-----LDRDIGTVRTSSLGRLFDACAYLIGLVQDHVTYEGQAAMEFEALALTNKKQ 659 Query: 632 VTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 V+ T P+ T Q+ L P + A FH A+ + ++ ++ G Sbjct: 660 VSTCATTPK--------TAVQELLADPNPA-RAAARFHLAIGR----IIGKELKATGADV 706 Query: 692 LVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 SGG N+LL + + + L+ +P GDGGLSLGQ + Sbjct: 707 FGVSGGCAANQLLVSAIKDEVGTENLITHHIVPPGDGGLSLGQAL 751 >UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S736_FERPL Length = 745 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 257/761 (33%), Positives = 387/761 (50%), Gaps = 62/761 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPPL 68 ++ + G VQGVGFRPFV++LA+++ L G V N GDG VE+ + + E F+ +L + P Sbjct: 3 RIIVSGVVQGVGFRPFVYRLAKEMKLRGYVKNCGDGTVEIVIDREVEEFVERLKKEIPDR 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYP 127 A+I+++ E F +F I +S G T + P D A C CL E+ +RRY YP Sbjct: 63 AKIENIRIEKF--EGFFDDFKIIESGGKTGILSLPPPDIAVCEDCLKEVFDEKDRRYLYP 120 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F CT CG RF++ +P+DR T +A FPLC C +EY +P DRRF+AQ +ACP CGP+ Sbjct: 121 FTTCTSCGQRFSVSERLPFDRENTTLAEFPLCEDCRREYENPDDRRFYAQSIACPACGPN 180 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 E + G + A++ A + G VAIKGIGG HL+C N V LR RP Sbjct: 181 YELLPKGVFGVE--AVKEAARMIDSGSFVAIKGIGGIHLSCLTEN-EIVWKLRKILRRPQ 237 Query: 248 KPLAVMLPVADGLPDAARQLLTTPAAPI-----VLVDKKYVPELCDDIAPDLNEVGVMLP 302 +P AVM+ + + A +LV KK V + +AP L+ +G+MLP Sbjct: 238 QPFAVMVRDIEAAKNLAELSEEEIEELKSFRRPILVCKKRVD--LEAVAPKLDTIGIMLP 295 Query: 303 ANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 PL ++L + L+ +VMTS N +P A S E+ L+ D FL HN I R+DD Sbjct: 296 YTPLHYILFKFLKAEAVVMTSANFPSEPMATSFEE----LKVPYDAFLNHNMRIANRVDD 351 Query: 362 SVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQH 418 SVV+ ++RRSRG+VP+ + L + V +GA+L N+ C ++ +AV+SQ+ Sbjct: 352 SVVKFVNGRRMIIRRSRGFVPEPIELDIKSEAV----AVGAELYNSLCFLKEGKAVMSQY 407 Query: 419 LGDLSD-DGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLPTQTV 473 +G+ ++ ++ AL +N D P++VV D HP Y +S ++ E+ V Sbjct: 408 IGNTANFKTFNEFFKRALFHFKNYLDLKPEFVVADMHPLYNTSIFAEKFGEEIGAEVLKV 467 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY--RECEHLGGL 531 HH AHA + +AE + + IA+ +DG+G G +G +WGGE L +N E E +G L Sbjct: 468 QHHFAHAFSVMAEKKID----EAIAIAVDGVGYGMDGKIWGGEVLYINLDSMEFERVGRL 523 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ--NYSETASVQQQNWSVLARAIERGINAP 589 + L GGDLA ++P R L + W+ Y E + +++ +++ I Sbjct: 524 ETIHLLGGDLAVERPLRVLFSIIYSQTGSWEELKYYEKYLKKGESFETFEELLKKRIGVV 583 Query: 590 LASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 ASS GR DA +A L C T YEGE A LEA+A P+ + + Sbjct: 584 EASSAGRVLDAASAMLEICFERT--YEGEPAMKLEAVAEESENYYDPIIETSWEISKFSS 641 Query: 649 TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM-------RGITT--------LV 693 F + + V + F DAL + + R + RG++ L+ Sbjct: 642 PFDGRGRRGEVKVLKIGEVFEDALKRYLSGERRGKIAYQIMSYLARGLSEIASEFEAPLI 701 Query: 694 FSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 SGGV +N + + + + + GD G+SLGQ Sbjct: 702 VSGGVAYNSIFQKEIGR-----NFYTNELVACGDNGISLGQ 737 >UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z839_PHOPR Length = 745 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 275/754 (36%), Positives = 393/754 (52%), Gaps = 74/754 (9%) Query: 35 LHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIR 91 + G V ND +GV++ ++ E+ + F+ L PPL+RID V P Q+ T F I+ Sbjct: 1 MAGSVINDSEGVKIDVQGKLEELDVFISDLTLQAPPLSRIDQVAVWPRPLHQV-TSFCIK 59 Query: 92 QSTGGTMNTQ-IVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPF 150 QS G + + + PD C C A++ R YRYPF NCTHCGPR+TI+ A+PYDR Sbjct: 60 QSKGRALTSVCLSPDQGICKECRADIADSASRYYRYPFTNCTHCGPRYTIVEALPYDRAV 119 Query: 151 TVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIA 208 T M +F LC C + Y++PLDRR+HAQP++C CGP + +VS A Q A+ Sbjct: 120 TGMRSFSLCQPCQQAYQNPLDRRYHAQPISCEHCGPSVRYVSGSGKVLAHQALAIDKTAK 179 Query: 209 QLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQL- 267 L+ G IVAIKG+GGFHLAC+A NS+AV LR K R KP A+M VADG +AA+QL Sbjct: 180 TLQRGGIVAIKGLGGFHLACNASNSDAVTRLRQIKRRQRKPFAIM--VADG--NAAKQLV 235 Query: 268 ---------LTTPAAPIVLVDKKYVPE--LCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 L + +PIVL+ KK VP+ L ++AP + +GV+LP PL LLL+ L Sbjct: 236 WGEAKEWDMLHSQPSPIVLMKKKAVPQSYLAANVAPSVPYLGVILPYTPLHVLLLEHLDQ 295 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRR 373 +V+TS N SG P A ++ G+ DG L HNR IVQ DDSVV +G +LR Sbjct: 296 AIVLTSANGSGMPIATEYDEVYDQFDGLIDGVLDHNRPIVQACDDSVVHFAGGKRRVLRM 355 Query: 374 SRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWRE 433 +RGY P + A G + P+L +GA K L +Q +LS +GD+ D Q ++ + Sbjct: 356 ARGYAPYSQA---GNGSEWPILAMGAQQKAAIGLSLAQQWILSPFIGDIDDLDTQHRYLD 412 Query: 434 ALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE-MNLPTQTVL-----HHHAHAAACLAEH 487 +R +++Y P ++ D HPGYVS+Q+A E L +Q + HHHAH A +AEH Sbjct: 413 VIRHFESLYQVEPTQIICDRHPGYVSTQYAIERQQLASQAITLHQVQHHHAHVLAVMAEH 472 Query: 488 QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPW 547 + V+ DG G G++G +WGGE L + + E + L L GGD A K P Sbjct: 473 KI---NQTVLGFAFDGTGWGDDGTVWGGEVLLSSSQHFERVFHLRPFRLLGGDRAIKSPA 529 Query: 548 RNLLAQCLRFVP-------EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 R + A L E + + + N +L ++ G ++P SS GR DA Sbjct: 530 RIVFAMLLECYSLNDIKRMELAVFKRWSESKMDNLFLLWQS---GNSSPYTSSMGRLIDA 586 Query: 601 VAAALGCAPATLSYEGEAACALE--------ALAASCHGVTHPVT--MPRVDNQL----- 645 A+ LG ++ YEGE LE ++A H + P +DN L Sbjct: 587 WASLLGLVD-SVDYEGECGLLLEQAALAATGSVAMEFHLTKTNMIDWQPLLDNALSLIAA 645 Query: 646 ---DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 DL++ Q W V + +A+A ++ A +V SGGV NR Sbjct: 646 APSDLSSDTQSG-TWSLLVTFLSRGLFEAIAHN----IKMVAATFPAYPVVLSGGVFQNR 700 Query: 703 LLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQ 734 +L + L+ T + +++P DGG++ GQ Sbjct: 701 VLLDLVYQQLSTLTNSIYCGETVPVNDGGIAAGQ 734 >UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncus mulieris RepID=C2KSY0_9ACTO Length = 872 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 301/872 (34%), Positives = 399/872 (45%), Gaps = 152/872 (17%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLN--LHGDVCNDGDGVEVRLREDPET---FL 58 NT + + G VQGVGFRP V ++A + L G ND V + + + F+ Sbjct: 3 NTVVRRRWILTGIVQGVGFRPHVARVASRFGAGLTGFCGNDSLSVFIEAQGELSVLRAFI 62 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMN 117 + PPL+ + + EF I S GG T I PD + C ACLA++ Sbjct: 63 AAVVDEAPPLSYVMRCQETTIDVVDSENEFRIVASRGGVGARTLIPPDVSLCAACLADIR 122 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 PG RRY Y F CT+CGPR +II +PYDRP T M FPLC AC EYRDP DRRFHAQ Sbjct: 123 DPGNRRYGYAFTTCTNCGPRLSIIEDLPYDRPQTTMRDFPLCAACAAEYRDPGDRRFHAQ 182 Query: 178 PVACPECGPHLEWVSHGE---------------------------HAEQEAALQAAIAQL 210 P++C +CGPHL V+ E AEQ+A L AA A L Sbjct: 183 PISCYDCGPHLWLVAASELPTGLADPFSSQDLGVDLVDGSRGGRSPAEQDAVLDAAAADL 242 Query: 211 KMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML---PVADGLPDA---- 263 + GKIVA+KG+GGFHL DA N AV+ LR RKHR KPLAVM+ A L D Sbjct: 243 RSGKIVAVKGLGGFHLLVDATNETAVSRLRRRKHRDGKPLAVMVADFAAARALVDIDTPE 302 Query: 264 --ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMT 321 QLL +PA PIVL ++ + +AP L+ +GVML PL LLL+ + P+V T Sbjct: 303 NPIAQLLLSPAHPIVLA-VRHGAAIAPSVAPGLDNLGVMLAYTPLHLLLLERVGRPVVAT 361 Query: 322 SGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML---------- 371 SGNLS +P +N AL L IAD FL+HNR I ++DSV+ + L Sbjct: 362 SGNLSSEPLCYTNADALRRLGSIADTFLLHNRGIAVPVEDSVIMAAPLTLPSSLSLKTAF 421 Query: 372 ---RRSRGYVPDALALPP------------GFKNVPPV-LCLGADLKNTFCLVRGEQAVL 415 RRSRGYVP LP V PV L +G +LKNTF LVR A Sbjct: 422 LPVRRSRGYVPLPFPLPEKPSRDPASQPCISVNQVNPVILGVGGELKNTFTLVRDGLAFT 481 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM--------- 466 S HLGD+ Q+ + +A+ + I+ P V+ D HP Y ++ WA Sbjct: 482 SAHLGDMGSLASQLAYEKAIGQLTKIHREHPTIVIRDLHPNYATTAWAERYVASARDSGR 541 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 L + HH AHA + LAE + P I + +DG G G++ +WG E V+ Sbjct: 542 TLRLLALQHHRAHALSLLAETRVP----RAIVIAVDGTGYGDDAKIWGSEVFLVDTSRVA 597 Query: 527 --------HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNW-SV 577 L LP LPG DLA ++PWR +A LR + S T + W S Sbjct: 598 AQGEAGVPRLAHLPYFPLPGADLAVREPWRQAVA-LLRSL----GLSATGLPLESRWCSS 652 Query: 578 LARAIERGIN---APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-------- 626 L + + ++ +P + + GR+FDAVAA LG + S+E A A++ A Sbjct: 653 LGQTVLSQVDSGSSPWSCALGRYFDAVAALLGLCEIS-SHEAAAPVAVQTAARRWQAENP 711 Query: 627 ------------------------------------ASCHGVTHPV---TMPRVDNQLDL 647 SC T+P +L + Sbjct: 712 LAAAQIVHSYLFQLGSALSDGPVVAQWTASPPPQTGVSCEAAASQSGIGTVPPAARELPM 771 Query: 648 ATFWQQWL-NWQAPVNQRAWAF--HDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 A + + +A + AF H +A+ FA A +GG N LL Sbjct: 772 AGIITELVAGIKAGICPGELAFRFHVVVAKLFATTTCALAAEYECAAAGITGGSALNSLL 831 Query: 705 RARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 + + + T L Q +PA DGGLSLGQ Sbjct: 832 TELIGAAVKEHGLTWLTHQRIPANDGGLSLGQ 863 >UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C225_9PLAN Length = 765 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 266/760 (35%), Positives = 393/760 (51%), Gaps = 47/760 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET----FLVQLYQH 64 +++ + G+VQG+G RP V + A++L L G +CN +G+E+++ E PE F L + Sbjct: 16 IRITLSGRVQGIGLRPAVARRARELRLAGSICNTTEGIELQI-EGPEKVVEEFERDLENY 74 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 P I RE I + T G + ++ D A C CLAE+ P + R+ Sbjct: 75 LPDETIIHQKTRETTKNCGSERFDIIEKQTSGPLAARVPADIAVCQDCLAELADPADHRF 134 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 Y F++CT CGPR++++ +MPY+R T M+ + LC C +EY P+D RFHAQ +ACP+C Sbjct: 135 GYAFLSCTRCGPRYSLLHSMPYERGQTGMSKYDLCSHCQREYDSPVDCRFHAQTIACPQC 194 Query: 185 GPHLEWVSH--GEHAEQEA-ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 GP + W + GE + + A+Q+A L+ G IV +KG+GG+ L DA + AV LR Sbjct: 195 GPRV-WCTSTTGETNDSDTEAIQSAARALQQGAIVGLKGLGGYQLLVDATSEAAVQMLRE 253 Query: 242 RKHRPAKPLAVM---LPVADGLP---DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 +K R KPLAVM L A L DA + L +PAAPIVL+ + ++ P LN Sbjct: 254 KKQRLGKPLAVMVTDLIAARKLAMMNDAEAETLASPAAPIVLLQAHENSPIAGNVNPGLN 313 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 VGVMLP PL LLLQ+ PLV+TS N G+P + + +AD +L H+R I Sbjct: 314 TVGVMLPTTPLHWLLLQQCDFPLVVTSANREGEPLFYQDRSHSEKINTLADCWLEHDRPI 373 Query: 356 VQRMDDSVVR-ESGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 + +DDSVVR +G + +R +RG P +L L ++ P + LG K L G Q Sbjct: 374 ERPIDDSVVRWMAGRLVTIRLARGLAPLSLDL----EHPQPAIALGGHQKAAVALNNGAQ 429 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 +VL+ H+GDL + ++ E L +Q +Y + + D HP Y +S A + + Sbjct: 430 SVLAPHIGDLESLAVCERYEEQLESLQQLYAVSQADYICDEHPDYFTSNRASQPVSRVER 489 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HHHAH A + E W LD V+ + DG G G++ +WGGE L + +G L Sbjct: 490 VQHHHAHIVAGMLEQGW-LD-RQVLGVAFDGTGRGDDQTIWGGEFLLSTAAQYTRVGHLK 547 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 LPGG+ A ++P+R +A L + ++ + + + I+ +P S Sbjct: 548 PFLLPGGEAAVREPYR--VAVSLMTETLGSEAALNTGIKTELVRPVLQIIKSKRLSPRTS 605 Query: 593 SCGRFFDAVAA-ALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR-VDNQLDLATF 650 S GR FD VAA LG + YEG+AA LEA ++ + + + QLD Sbjct: 606 SVGRLFDGVAALVLGVTHS--EYEGQAAMLLEASCDLAEAGSYEMPLSQGAPFQLD---- 659 Query: 651 WQQWL-----NWQAPVNQRAWA--FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 W+ + + +A V+ A FH LA+G A L R+ + ++V GGV NR Sbjct: 660 WRPCIAAILRDRKAGVSTGVMAMRFHRGLARGTARLCRQFMPL----SVVLGGGVFQNRC 715 Query: 704 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L LA L D L P +P DGGL+ GQ +A R Sbjct: 716 LVELLAEELRQNDQPLGLPGRIPPNDGGLAAGQLAVAIVR 755 >UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GIZ7_METPE Length = 750 Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust. Identities = 263/775 (33%), Positives = 384/775 (49%), Gaps = 71/775 (9%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCP 66 CG +R+RG VQGVGFRP+V+ A LN+ G V N G VE+ D V +H P Sbjct: 5 CGT-IRVRGIVQGVGFRPYVYAAAVALNIRGTVKNIGSEVEILAIGDHFDQFVAAIRHGP 63 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 A IDSV P I F+I S+ G + I PD A C CLA++ P R YRY Sbjct: 64 TRAVIDSVTVTPLIGPAPFNNFSILTSSEGARSGMIPPDIAICDECLADITNPESRYYRY 123 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 +C +CGPR++I+ +PYDR T M FP+C C EY +P RR HAQ +ACP CGP Sbjct: 124 WATSCVNCGPRYSILDQLPYDRQRTTMDTFPVCEDCRAEYSNPASRRHHAQTIACPTCGP 183 Query: 187 HLE-WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + + +G+ +E + A A+L G+IVA+KGIGGFH+AC A L+ R R Sbjct: 184 GVRLYDRNGDEIGEEEPIDEAAARLAAGEIVALKGIGGFHIAC---TEAAAPQLKERLGR 240 Query: 246 PAKPLAVMLPVADG-----LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P AVM+ A + + +Q LT PIV++ K+ L +L+ +G M Sbjct: 241 TKQPFAVMVTPARADRIAQINEGEQQALTGIEHPIVVLVKRDRNALKG--ISNLHTIGCM 298 Query: 301 LPANPLQHLLLQELQCP----LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 LP L HLL L LVMTS N+ G P +A+ L G+AD FL H+R IV Sbjct: 299 LPYTGLHHLLFSALADHATDLLVMTSANMPGYPMITDLSEAVTHLSGVADCFLSHDRRIV 358 Query: 357 QRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 R DDSV+R+ G ++R SRGY P +P G + +L +GA+L + R A+ S Sbjct: 359 NRCDDSVIRD-GYLIRLSRGYAPLRTRIPLGDRC---ILGVGAELNVNATIYRDGFAITS 414 Query: 417 QHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQT 472 H+G++ + + + + + +VHD HP ++S+++A E+ Sbjct: 415 PHIGNVRNPKTLQYLEQTIETLGGLLGAEYDLIVHDLHPRFLSTRFAERLGDELGAEVIA 474 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH AH AA E + + +DG+G G++ +WGGE + +G L Sbjct: 475 VQHHRAHIAATTQE--------PCVGIAIDGVGYGDDRTIWGGEIFAGETLHLDRVGHLE 526 Query: 533 AVALPGGDLAAKQPWRNLLA-----QCLRFVPE--WQNYSETASVQQQNWSVLARAIERG 585 +V++PGGDLA + P R L L + E W E ++QQQ + + Sbjct: 527 SVSMPGGDLATRFPERMLYGLLPDDTVLDLLDERGWSEV-ERRALQQQ--------VAKQ 577 Query: 586 INAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTMP-RVDN 643 IN PL SS GR DA+AA LG C T Y+GE A LE++AA G H + R ++ Sbjct: 578 INTPLTSSTGRVLDAMAALLGICRERT--YDGEPAMVLESVAA--EGTPHSWDLEYRTED 633 Query: 644 QLDLATF-------WQQWLNWQAPVNQR--------AWAFHDALAQGFAALMREQATMRG 688 ++ + + ++ + P + A + LA+G A + A +G Sbjct: 634 GAEVLSTRALVRKAFNEYRSLDRPGTRSGQQQRADLAASIQFNLARGIAGMAVRAADEQG 693 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQS--LPAGDGGLSLGQGVIAAAR 741 ++ + SGGV N ++R + + L F + P GDG +S GQ V + Sbjct: 694 LSVVALSGGVAINAMIRETIHTIVCKHGLTFRMNDRYPPGDGCVSFGQVVYGGKK 748 >UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RDT6_ARCPR Length = 753 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 266/780 (34%), Positives = 403/780 (51%), Gaps = 86/780 (11%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPPL 68 ++ +RG VQGVGFRPFV++LA+ +NL G V N G G VE+ + + + F+ +L + PP+ Sbjct: 3 RITVRGIVQGVGFRPFVYRLAKSMNLKGYVKNTGTGCVEIVIDRNVDEFIRRLKEEKPPI 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYP 127 A I VE E +F I +S G + P D A C CL E+ P RRY YP Sbjct: 63 AEIHEVEVEEIPDLNF-NDFVIEKSGGKKGGLSLPPPDVALCKFCLKELFDPKNRRYLYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FI+CT CGPRF++ +PYDR T FPLC C KEY + LDRR++AQ +ACP+CGP Sbjct: 122 FISCTDCGPRFSVAIKLPYDRENTTFNEFPLCDECQKEYWNVLDRRYYAQSIACPKCGPQ 181 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 E + G + A+ A + G++VAIKGIGG+H+AC + + V LR + RP Sbjct: 182 YELIYGGRIIKGLDAIIRAAELIDEGRMVAIKGIGGYHIAC-ITDDDVVFKLRDKLGRPQ 240 Query: 248 KPLAVML-------PVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P A+M VA D R+ +T+ PI ++ KK P +AP LN +GVM Sbjct: 241 QPFAIMARNLEVVRKVAYVSEDEERE-MTSYIRPITVL-KKRNPNEFFAVAPYLNTIGVM 298 Query: 301 LPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP +PL ++L L+ +VMTS N G+P I + +L D +L HN I R+ Sbjct: 299 LPYSPLHYILFNYLKSDFIVMTSANKPGEPMYIDDGVFSLEL----DAYLRHNLKIHNRV 354 Query: 360 DDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSV++ G ++RRSRG+VP + L K L +GA+L N+ LV+ +A++S Sbjct: 355 DDSVIKFVGRRRLIIRRSRGFVPKVIEL----KGCLDGLAVGAELYNSITLVKDGKAIVS 410 Query: 417 QHLGDLSD-DGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA----REMNLPTQ 471 Q++G+ ++ ++ A+ N D P+Y+ D HP Y ++ +A R++N+P Sbjct: 411 QYIGNTANFKTFNEFFKRAVDFFTNFIDLKPKYIACDLHPLYNTTNFAERLSRKLNIPLY 470 Query: 472 TVLHHHAHAAACLAEHQWPLDGGD-VIALTLDGIGMGENGALWGGECLRVNYRE--CEHL 528 V HH AHA + +AE G D IA+T+DG+G G +G +WGGE L +++ + + Sbjct: 471 KVQHHFAHALSVMAER-----GIDKAIAITVDGVGYGFDGTIWGGEVLLIDFERGTFKRV 525 Query: 529 GGLPAVALPGGDLAAKQPWRNLL-----AQCLRFVPEWQNYSETASVQQQNWSVLARAIE 583 G L L GGDLA K P R L A+ L + ++ Y + +++ + E Sbjct: 526 GRLERFRLIGGDLATKYPLRVLFSLLYNAKRLDLLDGYEKYLR----KGESFEIFESFHE 581 Query: 584 RGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHP------- 635 GI +S GR DAV+A L C T YEGE A LE++ P Sbjct: 582 TGI---ATTSMGRVLDAVSAMLKICFERT--YEGEPAMKLESVVEPFECEVKPRIDVVRE 636 Query: 636 ---VTMPRVDNQLD--------------LATFWQQWLNWQAPVNQRAWAFHDALAQGFAA 678 + P VD + + +A +++L ++ ++ A+ LA+GFA Sbjct: 637 DSVYSKPYVDEEFNVKSGDVRVIRISDFIANCMEEYLEGESK-SKIAYKVMKYLAEGFAE 695 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 ++++ +V SGGV N + ++ + + + GD G+S GQ I Sbjct: 696 IVKDYN-----YPVVASGGVCFNSYFIPLIEEHVDVYV---NEKVACGDNGISFGQAYIG 747 >UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z0U0_9SYNE Length = 798 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 306/796 (38%), Positives = 403/796 (50%), Gaps = 82/796 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHC 65 +QL I G VQGVGFRP V +LA++L L G V N G GV + L+ E T L +L Q Sbjct: 5 LQLEIEGLVQGVGFRPLVARLARELGLSGQVFNTGAGVLLELQGPAEAIATLLQRLRQQL 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIR----QSTGGTMNTQ------IVPDAATCPACLAE 115 P +RID + R + F I+ +S GG I PD A CPAC AE Sbjct: 65 PAHSRIDRIRRHRRPLVEGEAGFEIQAAPMESPGGKREDTSVRWALIQPDLAPCPACRAE 124 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 ++ P RR Y I+C HCGPR++++ A+P+DR T +AAF LCPAC EY DP DRR H Sbjct: 125 LHDPDNRRCGYALISCVHCGPRYSLMGALPFDRAHTSLAAFALCPACQAEYDDPSDRRCH 184 Query: 176 AQPVACPECGPHLEWVSHGEH----------AEQEAALQAAIAQLKMGKIVAIKGIGGFH 225 AQ +ACP CGP L W G + LQAA A LK + VA+KG+GGF Sbjct: 185 AQTIACPRCGPRLSWWDTGGQRLSDPRRPHPSGPSPCLQAAAAALKANRTVALKGVGGFQ 244 Query: 226 LACDARNSNAVATLRARKHRPAKPLAVMLP--------VADGLPDAARQLLTTPAAPIVL 277 L AR AV LR RK RP KPLAVM P P+A QLL +PAAPIVL Sbjct: 245 LLVRARCQAAVTELRRRKGRPEKPLAVMAPDLAWVRRHCHLNRPEA--QLLGSPAAPIVL 302 Query: 278 VDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQA 337 + ++ +CD +AP +GVMLP++PL LLL+ L PLV TSGN SG+P + +A Sbjct: 303 LRRRGEAGVCDAVAPGNPWLGVMLPSSPLHLLLLELLGEPLVATSGNRSGEPLSHDETKA 362 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVR-ESGE--MLRRSRGYVPDALALPPGFK-NVPP 393 L +L G+ADGFL+H+R I+ +DDS+ + GE +LR +RGY P A+ LP G + V P Sbjct: 363 LQELAGLADGFLVHDRPIINPVDDSIAQVVCGEPMLLRHARGYAPTAVDLPCGGEPGVDP 422 Query: 394 -------VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 + +G LK+ L G +A+L HLGDL + R +L + P Sbjct: 423 QTQAPTGEVAMGGQLKSALALGWGRRALLGPHLGDLDSAAGEAHLRRSLDAALARHGLHP 482 Query: 447 QYVVHDAHPGYVSSQWAREM----NLPTQT-VLHHHAHAAACLAEHQWPLDGGDVIALTL 501 D H Y S + E+ P V HHHAH ACLAEH + + Sbjct: 483 AGYAVDQHRSYRSHRIGLELAAAHGCPVPLGVQHHHAHLLACLAEHGL---APPQVGVAW 539 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLL-----AQCLR 556 DG G G +G LWGGE LR+ L LPG + A ++P R L A+ Sbjct: 540 DGAGQGSDGTLWGGEVLRLEQSGFRAEARLRPFPLPGAERAMREPRRAALGLLFAARGSE 599 Query: 557 FVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + A+ + VL+R +++G+ +P SS GR FDAVA+ LG S+EG Sbjct: 600 GLDRATGTLSMAAFSAEERQVLSRMLQQGLQSPWCSSVGRLFDAVASLLGLQ-QRCSFEG 658 Query: 617 EAACALEALAASCHGVTHPVTMPRVDNQLDLATFW------QQW-LNWQAPV-----NQR 664 +AA LEA A +H T R L L T + W L+W + +QR Sbjct: 659 QAALKLEAAA------SHAGTAGRRRYALVLRTHTEPGSGSEPWLLDWHPLLQDLIKDQR 712 Query: 665 AWAFHDALAQGF----AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLL 718 +A+A F A + A + L+ GG NRLL A L A L Sbjct: 713 RGVAPEAIALAFHQALADALVALAVQLDLERLLLGGGCFQNRLLLALAVKGLRRAGIEPL 772 Query: 719 FPQSLPAGDGGLSLGQ 734 +P+ +P DGGL+LGQ Sbjct: 773 WPRRIPCNDGGLALGQ 788 >UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXE2_METI4 Length = 790 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 272/794 (34%), Positives = 388/794 (48%), Gaps = 108/794 (13%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 + ++++GKVQGVGFRP+V++LA+ +L G V N DGV + + +E E F L + Sbjct: 14 AIHIQLKGKVQGVGFRPYVYRLARSYDLKGWVSNGTDGVHIHVEGQKEILERFYRDLLRD 73 Query: 65 CPPLARI-DSVERE-PFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEMNTPGE 121 PPLA + +S RE PF+ + F +++S ++ IV PD C +C E+ Sbjct: 74 YPPLALLTESFCREAPFLGLE---GFIVKESIEEKEHSVIVLPDLDVCESCKEELYCSSN 130 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+RYPFI CT CGPR++II ++PYDR T M FP+C C +EY +P DRRF++Q +C Sbjct: 131 RRFRYPFITCTECGPRYSIIYSLPYDRSKTTMNIFPMCKDCLEEYENPSDRRFYSQTNSC 190 Query: 182 PECGPHL-------EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 ECG + E ++ GE A +E A AIA+ G+IVA+KGIGG+ L DA N Sbjct: 191 KECGIRVYLYGKQKEEIAQGEEAIKEGAW--AIAE---GQIVAVKGIGGYLLMADALNPA 245 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPE-LC 287 A+ LR RK R +KP A+M L + + L + PI+++ +K + Sbjct: 246 AILKLRERKRRASKPFALMFNDIQEVEKEVYLSEKEKSWLISRQKPILILQRKKTQSPIA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 D +AP + +G+MLP PL LLL L+ PLV TS N+SG P L + D Sbjct: 306 DLVAPAQDTLGIMLPYTPLHILLLDYLKRPLVATSANISGLPIVFEEGMLFLKLGHVFDK 365 Query: 348 FLIHNRDIVQRMDDSVVRES-----GEMLRRSRGYVP---DALALPPGFKNVPPVLCLGA 399 L HNRDIV DDSV+R S LRRSR + P +L +P G L LGA Sbjct: 366 VLTHNRDIVVPQDDSVIRVSFFFKQTIFLRRSRSFAPFLNASLRVPKG----ECYLALGA 421 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY-- 457 + K+T C LSQ+LGDL + +++ L N++ F PQ ++ D HP Y Sbjct: 422 EKKSTVCFCHEGNIFLSQYLGDLDCFEAEENFKKTLSHFFNLWGFKPQKIILDLHPLYRS 481 Query: 458 --VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 + + E N+ HH AH A LAE + V+ + DG G GE+GA+WGG Sbjct: 482 RLIGEAMSEEKNIERIYFQHHKAHFWAILAEKKLLGLEEPVLGVIWDGTGYGEDGAVWGG 541 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPW----------RNLLAQCL--RFVP-EWQ 562 E E + L GD A ++P R ++ L +F P EW+ Sbjct: 542 EFFLYYKGRMERVNHFEYFPLLLGDKAVREPRISALGIFRKERKIVEDFLKPKFNPWEWK 601 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACA 621 Y +++ W+ S GR FDA+A+ LG C A S+EGEAA A Sbjct: 602 TYRALLD-RKKYWA--------------CCSVGRLFDALASLLGLCDRA--SFEGEAAIA 644 Query: 622 LEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQ------- 674 L+ LA+S V + DL +W + +AP+ +R + + L Sbjct: 645 LQRLASSS-----------VQSLSDLEKIPLRWFDEKAPL-RRPISLENLLKSIEKSIVE 692 Query: 675 ---------GF----AALMREQATMRGITTLVFSGGVIHNRLLRARLA-HYLADFTLLFP 720 GF + L+ + A G + FSGGV N LL L + F L F Sbjct: 693 EIPKEEISLGFHFWLSKLIGKLAENTGARKIAFSGGVFQNSLLVDLLYLQWAGRFDLFFH 752 Query: 721 QSLPAGDGGLSLGQ 734 + D +S GQ Sbjct: 753 DEISPNDENISFGQ 766 >UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCZ2_FLAJ1 Length = 756 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 245/764 (32%), Positives = 378/764 (49%), Gaps = 61/764 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 Q+ I G VQGVGFRPFV+ A Q NL G V N+ GV V ++E+ +T F+ QL + P Sbjct: 6 QITISGIVQGVGFRPFVYNTAIQFNLKGFVSNNEFGVVVIVQEEEKTIREFVAQLKKRHP 65 Query: 67 PLARIDSVEREPFIWSQLPTE-----FTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPG 120 A I++++ S++ TE F I+ + G ++N + PD A C C E+ P Sbjct: 66 KKAIINTIQ-----VSEIETEERFDLFFIKPTEKGISINAPLTPDFAICKNCKEEILDPQ 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RR+ YPF +CT CGPR+ I P++R T M+ F +C C +EY +P D RFH+Q + Sbjct: 121 NRRFYYPFTSCTSCGPRYAIAEKFPFERENTSMSPFKMCQTCLEEYLNPNDIRFHSQTNS 180 Query: 181 CPECGPHLEWVSHGE---HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 CPECG + + + + ++ +L G+I+A+K G+ L CD N+ V Sbjct: 181 CPECGIQIVFTDNNGTLISGTNKEIFESISEKLNQGQIIAVKNTSGYLLLCDGSNNQTVQ 240 Query: 238 TLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPEL-CDDI 290 LR RK R AKP AV+ + ++LL + APIV++ K +L ++I Sbjct: 241 ELRNRKRRSAKPFAVLFSDFKQIKKHLLHDKTEKKLLKSTQAPIVILPIKNQKKLAVNEI 300 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP++ +G MLP + + HL+ Q PLV TSGN +G P + +A+ L IAD +L Sbjct: 301 APNMKTIGAMLPNSGILHLISNLFQKPLVATSGNFNGSPLFFNQNEAVQSLNSIADYYLH 360 Query: 351 HNRDIVQRMDDSVVRESGE-----MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 HN +I DDSV+R S + +LRR+RG P+ +LCLGA LKNT Sbjct: 361 HNLEIQNSQDDSVIRFSRKNKQKIVLRRARGLAPNIDNFHLN-NTSDKILCLGAALKNTI 419 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY----VSSQ 461 + +Q S+++G++ + ++ ++ Q+ +DF PQ +V+D HP Y + S Sbjct: 420 T-ISNQQIYQSEYIGNVLNYDTYKRFENRIQNYQHFFDFVPQTIVYDQHPSYDNNKIVSD 478 Query: 462 WAREMN-LPTQTVLHHHAHAAACLAEHQ-WPLDGGDVIALTLDGIGMGENGALWGGECLR 519 + +E L T V HH AH AA L E + W ++ + DG G G ++GGE + Sbjct: 479 FLKENPLLKTIKVQHHEAHFAAILGEKKLWK--KSKILGVIWDGSGFGNENEIYGGEFFK 536 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 N E +G L GD A P + L+ + + +Y ++ + +V + Sbjct: 537 YNRDEITRIGHLEYFPWILGDKMALNPKMSALS-----ISQNDDYFQSF-FNKNELTVYS 590 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-----ASCHGVTH 634 + IE + SS GR FDAVA LG +S+EG+ LE LA S + Sbjct: 591 KLIENSVIK--TSSIGRLFDAVAFTLGFK-GNISFEGQTGMFLENLAQKAFYKSNVKLKD 647 Query: 635 PVTMPRVDNQLDLATFWQQWLN-WQAPV--NQRAWAFHDALAQGFAALMREQATMRGITT 691 + + N + Q + +Q + N A FH L + + + A Sbjct: 648 YLKDENITNIIPSKKLLVQIVKAFQNNIDCNVIALNFHHTLVK----CIEKTALFSKSKE 703 Query: 692 LVFSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQ 734 + FSGGV N +L + +L ++ L F ++L D +S GQ Sbjct: 704 IAFSGGVFQNSVLVDLIIDHLQPNYKLHFHETLSPNDENISFGQ 747 >UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alphaproteobacteria RepID=Q2RXN2_RHORT Length = 768 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 296/776 (38%), Positives = 390/776 (50%), Gaps = 77/776 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQH-CPP 67 ++L +RG VQGVGFRP V++LA L L G V N G GV + + ++ +H PP Sbjct: 23 LRLSVRGLVQGVGFRPTVYRLATGLGLRGFVLNTGAGVVIEVEGARAGEFAEILRHGAPP 82 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 A I+++E S F I S T T+I PD A CP+CL+E+ P +RRYR+ Sbjct: 83 RAHIEALETHRLAASGRDEGFRIIDSDTAAPGTTRIGPDTAPCPSCLSELFDPADRRYRH 142 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI C CGPR TI A+PYDR T M F LC AC +Y DP RRFHA+ ACP+CGP Sbjct: 143 PFIACCDCGPRHTIAGALPYDRARTAMGGFALCAACAADYADPASRRFHAELTACPDCGP 202 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + A+ + +++ G IVA+KG+GGF L CDA V LR K R Sbjct: 203 RLTL----DPAD-------ILREIRAGAIVALKGLGGFQLICDASQPAPVERLRRGKRRD 251 Query: 247 AKPLAVM---LPVADGLPD---AARQLLTTPAAPIVLVDKK--YVPELCDDIAPDLNEVG 298 AKP A++ L A L D A + LT+P PIVL+ ++ P L IAP L+ +G Sbjct: 252 AKPFALLVASLTDARALCDVRSAEAEALTSPERPIVLLHRRADARPPLAAAIAPGLDTLG 311 Query: 299 VMLPANPLQHLLLQE----------LQCP----LVMTSGNLSGKPPAISNEQALADLQGI 344 VMLP PLQ+L+ E L P LV TS N +G P + + A+L Sbjct: 312 VMLPVTPLQYLIFHEAAGRPAGTAWLDQPTPLVLVATSANRAGAPLILEGAEVAAELGAD 371 Query: 345 ADGFLIHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 D H+R I+ R DD VVR G+ +RR RG P+ + L + +PPVL LGA Sbjct: 372 VDVLADHDRPILARADDGVVRVLGDQARSVRRGRGQTPEPIVL---GRALPPVLALGAQW 428 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KN+ C+ RG++A LSQH+GDL R A+ + D P V HD HP + SS+ Sbjct: 429 KNSVCVTRGDRAFLSQHIGDLDSRATLAFQRAAIDQLMRFVDTRPVVVAHDLHPDFASSR 488 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 A M LP T+ H HA + +D G ++ L LDG G+G++G WGGE LR++ Sbjct: 489 LAEAMGLP--TIAIQHHHAHLAAVAAEHHID-GPLVGLALDGFGLGDDGGAWGGELLRLD 545 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWR---NLLAQCLR---FVPEWQNYSETASVQQQNW 575 LG L +ALPGGD AA+QPWR + LA+ R V + + E + Sbjct: 546 GDGFVRLGHLAPLALPGGDAAARQPWRMAASALARLGRGDEIVRRFAHRPEAGQIA---- 601 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 ++LAR G +SCGR+FDA A LG + YEGEAA LEALAAS Sbjct: 602 ALLARPDTLGQT----TSCGRWFDAAAGLLGLCD-EVRYEGEAAMRLEALAAS------- 649 Query: 636 VTMPRVD------NQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 PR+ +Q L + A FH L Sbjct: 650 ---PRIAAEGWRISQGVLDLLPLLDRLSRLDAGAGAGLFHGTLVAALVDWALPAIHACPG 706 Query: 690 TTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + +GG + NR L L A T L P+ PA DGGL+LGQ +A RWL Sbjct: 707 ARVALAGGCLINRSLAEGLITTFAARGITALLPRQSPANDGGLALGQAYLAGLRWL 762 >UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 Tax=Bacteria RepID=Q2JE38_FRASC Length = 848 Score = 367 bits (942), Expect = e-99, Method: Compositional matrix adjust. Identities = 308/825 (37%), Positives = 400/825 (48%), Gaps = 128/825 (15%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLARIDSVEREP 78 FRP+V +LA L L G V ND V + D FL +L PPLARI+ V Sbjct: 31 FRPYVHRLAGTLGLAGFVGNDSTSVFAEVEGDEVAVAEFLRRLEPQAPPLARIERVTVTS 90 Query: 79 FIWSQLPTEFTIRQSTGGTM--NTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCG 135 S + R G T+ + +VP D A C CL EM P +RR+R+PFI CT+CG Sbjct: 91 VTRST-AGDAGFRIVAGATVPGDRTLVPADTAVCADCLREMFDPTDRRHRHPFITCTNCG 149 Query: 136 PRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGE 195 PR+TII A+PYDR T MA FP+C C EY DP DRRFHA+PVACP CGP L W S + Sbjct: 150 PRYTIISALPYDRAATTMARFPMCARCAAEYADPADRRFHAEPVACPSCGPKL-WFSPAD 208 Query: 196 HAEQEA-----ALQAAIAQLKMGKIVAIKGIGGFHLACDARN-------SNAVATLRARK 243 E AL AA L G +VA+KG+GG+HLAC A N A+A LRARK Sbjct: 209 GTGPEVHGTDAALAAAQRALADGAVVAVKGVGGYHLACSAENDPGDTAGDTALARLRARK 268 Query: 244 HRPAKPLAVMLP-------VADGLPDAARQLLTTPAAPIVLVDK------KYVPELCDDI 290 RP KP AVM+ VAD L A LL +PAAPIVLV + + + + Sbjct: 269 DRPDKPFAVMVRDLATAALVAD-LSSAEAALLASPAAPIVLVRRSPAAGMSGISGMSRLV 327 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCP-------LVMTSGNLSGKPPAISNEQALADLQG 343 AP VG++LP P+ HLL + LVMTSGN SG+P +++ A L G Sbjct: 328 APGTPLVGLLLPYTPVHHLLFAPVPGGGPRPPRMLVMTSGNRSGEPICFADDDARDRLAG 387 Query: 344 IADGFLIHNRDIVQRMDDSVVRESGEM---------LRRSRGYVPDALALPPGFKNVPPV 394 +AD FL H+R I+ DDSVVR +RRSRGYVP + L + V V Sbjct: 388 LADAFLRHDRPILLPCDDSVVRCGYGDDGDDGQVLPVRRSRGYVPLPVDLG---RPVRSV 444 Query: 395 LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAH 454 L +G + K+TFCL +A +SQHLGD+ + + + ++Y P+ + D H Sbjct: 445 LAVGGEGKSTFCLTTDRRAFVSQHLGDMGSLAALRAFERSAAHLTDLYGVAPETLAADLH 504 Query: 455 PGYVSSQWA----------------------------REMNLPTQTVLHHHAHAAACLAE 486 PGYV+ WA R V HHHAH AA LAE Sbjct: 505 PGYVTRAWAERAAATGTEQAAAGDPAAGANQTSTHGSRSAGRLPHLVQHHHAHVAALLAE 564 Query: 487 HQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLGGLPAVALPGGDLAAK 544 H G ++ + DG G G +G +WGGE L V + E + L + LPGGD A + Sbjct: 565 HGRL--GDTILGVAFDGTGYGLDGTIWGGEVLLVGPDVARAERVAHLRPIGLPGGDAAVR 622 Query: 545 QPWRNLLAQCLRFVPEWQ-NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAA 603 P+R LA +W + + + L A++RG+ +S GR FDAVA+ Sbjct: 623 NPYRVALAHLAAADLDWTADLAPVRACSVAELRTLRTALDRGVACVPCTSMGRLFDAVAS 682 Query: 604 ALGCAPATLSYEGEAACALEALAAS------------------------CHGVTHPVTMP 639 LG ++YE +AA LEALAA+ +GV PV + Sbjct: 683 LLGVR-HRITYEAQAAVELEALAAAEFGGAGLGGAGLGGAGACRLSFGLANGVLDPVGV- 740 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFH---DALAQGFAALMREQATMR--GITTLVF 694 LA L V A AFH A L R + +R G+T VF Sbjct: 741 -------LAGIV-AGLRAGVAVPVLAGAFHLAVADAVAEVAGLARRRYGVRLVGLTGGVF 792 Query: 695 SGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 + V+ R RARLA A F +L + +P GDGGL+LGQ +AA Sbjct: 793 A-NVVLTRACRARLA--TAGFDVLVHRVVPPGDGGLALGQAAVAA 834 >UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Methanomicrobiales RepID=A2STT5_METLZ Length = 742 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 258/769 (33%), Positives = 380/769 (49%), Gaps = 62/769 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLA 69 ++ +RG VQGVGFRPFV+ AQ+ + G V N G VE+ + + + P ++ Sbjct: 5 KIILRGIVQGVGFRPFVYAQAQRFGIKGTVINHGSEVEIDAAGEEFDAFCREIRKGPKMS 64 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 IDSV EP P +FTI +S G + D ATC CL ++ P R + Y Sbjct: 65 VIDSVSVEPLHDWNPPADFTILKSQDGARTGFVPADIATCEHCLHDIMDPNSRYFGYWAT 124 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 +CT CGPR++II+++PYDR T M FP CP C K+Y +P +RR HAQ + C ECGP L Sbjct: 125 SCTDCGPRYSIIKSVPYDRERTSMDEFPACPDCLKDYENPGNRRHHAQTITCRECGPKLS 184 Query: 190 WVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + GE+ E + AA L G IVA++G+GGFH+ C + + L+ RP + Sbjct: 185 LLKGTGENIEGADPISAAAELLDAGNIVAVRGVGGFHICCVEKTAE---RLKQNLGRPNQ 241 Query: 249 PLAVMLP---VADGLPDAARQ---LLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 LAVM+ + D + + ++ LL P PI+++D K PE ++ L+ +GVMLP Sbjct: 242 SLAVMMKPETMRDFVVEPTKEEWDLLKGPVHPIMILD-KIDPESHRALS-QLHNLGVMLP 299 Query: 303 ANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 L HLL +L+ P L+MTS N G P + + + + D L H+R+IV R DD Sbjct: 300 YTGLHHLLFAKLKSPLLIMTSANAPGTPMITETKIIIEKMGRVVDYILTHDREIVNRCDD 359 Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGD 421 SVVR+ G ++R SRG+ P + G + +L +G +L + +G + S H+G+ Sbjct: 360 SVVRD-GYLIRMSRGFAPLRTRMDLGDRQ---ILGVGPELNANATIYKGGFLITSPHIGN 415 Query: 422 LSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL----HHH 477 + + E + + ++ P+ + HD HP ++S++ A+E+ L HH Sbjct: 416 IRNPPTVAYLEETIEKLTSLTGSMPKIIAHDLHPQFLSTRVAQELAERYGATLCPVQHHC 475 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN----YRECEHLGGLPA 533 AH A+ E +V+ + +DG+G GE+ +WGGE L + Y H L Sbjct: 476 AHIASVTTE--------EVVGIAIDGVGYGEDATIWGGEILAGSPGNGYMRTGH---LEP 524 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWS-----VLARAIERGINA 588 V +PGGDLA K P R L +P S +Q + W+ +LA+ E+ N Sbjct: 525 VLMPGGDLATKFPERMLYG----ILPTKDTLS---LLQNRGWNDTALRILAQQTEKRFNT 577 Query: 589 PLASSCGRFFDAVAAALG-CAPATLSYEGEAACALEALAASCHGVTHPVTM---PRVDNQ 644 P+ +S GR DA AA LG C T Y+GE + LEA AA GV P+ + R Sbjct: 578 PVTTSTGRVLDAAAALLGICRERT--YDGEPSMMLEAYAA--RGVAQPMEISIESREGRD 633 Query: 645 LDLATFW----QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 + L + + L+ V A + LA+G A GI T SGGV Sbjct: 634 VLLTSSILREGMEMLSDGISVEDIAASIQTTLAKGIADTALAGIEKTGIHTAALSGGVAI 693 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 NR +R + L A L P GDG +S GQ V A G + Sbjct: 694 NRSIRETIIETLKEAGVACLTNPRYPFGDGCISCGQVVTAGILAKEGRI 742 >UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Helicobacter RepID=C3XM42_9HELI Length = 778 Score = 364 bits (935), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 257/779 (32%), Positives = 373/779 (47%), Gaps = 72/779 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF--LVQLYQHCP 66 V + G VQGVGFRPFV+++A++ + G V N GV + + E + Q P Sbjct: 7 VTYALEGVVQGVGFRPFVYKIAKKCGIVGYVRNTTSGVTILAQGTNEALECFEKALQTPP 66 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYR 125 +A+I + + ++ +F I QST + +VP D A C CL EM P RR+ Sbjct: 67 KVAKITKITKTESKKTESFLDFKILQSTQESALNAVVPADIALCKECLEEMWNPKNRRFH 126 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFI+CT+CG R+++I A+PYDR T MA F +C C +EY +P RRFH++ C +CG Sbjct: 127 YPFISCTNCGGRYSLIHALPYDRKSTAMAQFRMCKECLEEYENPDSRRFHSEINCCEKCG 186 Query: 186 PHLEWVSH-GEHAEQEAA------------------LQAAIAQLKMGKIVAIKGIGGFHL 226 P L + + G E E + L A+ LK GKI+A+KGIGG+ L Sbjct: 187 PKLFFTGNLGFFKELEISQSDFALCQKFIKEFTQNPLDKAVEFLKQGKILAVKGIGGYAL 246 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVM---LPVADG---LPDAARQLLTTPAAPIVLVD- 279 C+ N+ A+ LR RK+RP KP A+M L +A+ L +++L + API+L D Sbjct: 247 VCNGLNTEAIMVLRMRKNRPRKPFALMCKDLKMAESYVHLSAFQKEILDSNIAPILLCDF 306 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 K P IAP+L +GV+LP PL +LL + + PL+ TS NLSG+P + Sbjct: 307 KDKSPLPHSVIAPNLETLGVILPYAPLHYLLFEAIDFPLIFTSANLSGEPIIKDFSGIVE 366 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVR-------ESGEMLRRSRGYVPDALALPPGFKNVP 392 +L + DG L+++R+I+ +DDS+VR E ++LRR+RG++ D L LP FK+ Sbjct: 367 NLGDVCDGVLLYDREILNPIDDSLVRTILYNGKEQMQVLRRARGFLCD-LNLP--FKSKQ 423 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 L LGA K TFCL ++ +LS HLGDL + +L Y + V D Sbjct: 424 DFLALGAQQKATFCLKTQDRVLLSPHLGDLDSVASVENFLNTQKLFIERYQSALKDFVLD 483 Query: 453 AHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 HP Y ++ N Q V HH AH + + E++ V+ + DG G GENG + Sbjct: 484 LHPNYTQREFIEGSN-KAQRVQHHFAHLLSNITENEI---NEPVLGVIFDGTGYGENGKI 539 Query: 513 WGGECLRVNYR---ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET-- 567 WGGE L N + E + + L GG+ A K+ R L L F + + E Sbjct: 540 WGGEFLSWNPKMPLEFKRVAHFDDFTLLGGEKAIKEIKR--LGLSLVFESFKEGHKELDL 597 Query: 568 ---ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALE 623 +++ + E L +S GR FD V+A G C A SYEGE LE Sbjct: 598 PLFREFSKEHLEIFYNLKESA--KVLCNSAGRLFDGVSALCGVCLQA--SYEGEGGMVLE 653 Query: 624 ALAASCHGVTHPVTMPRVDNQLDLATFWQQ--------WLNWQAPVNQRAWAFHDALAQG 675 +LA + ++ Q L + A FH LA Sbjct: 654 SLALKAFKKLESQNLGAYSYEIKEGVINYQPMIRGICKELELGVEACEIALRFHITLASV 713 Query: 676 FAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 A + + + SGG N LL L + + +P DGG+S+GQ Sbjct: 714 IAKVAEDYPCV------ALSGGCFQNALLTQLTLEKLKGKKVYLNKKIPCNDGGISIGQ 766 >UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridia RepID=A4XJQ0_CALS8 Length = 757 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 244/754 (32%), Positives = 368/754 (48%), Gaps = 49/754 (6%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLY--QHCPPLA 69 RG VQGVGFRPF++ LA+ L L G V N G+GV + E T + Y + P A Sbjct: 10 FRGLVQGVGFRPFIYNLAKDLGLVGFVKNIGEGVLAEFQGELKSTAAIDEYIEKKLPRNA 69 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 +I+++E+ + +F I S+ G ++T + D C C E G R + PFI Sbjct: 70 KIETIEKYEIEPNFNEDDFYILDSSKGKISTIVPYDLGLCEECKREFYDKGHRHFMNPFI 129 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 +C +CGPR+TII ++PYDR T M F C C KEY P +RRF+AQ CP CGP L Sbjct: 130 SCINCGPRYTIIESLPYDRDRTSMKEFEFCCDCKKEYYTPDNRRFNAQSTTCPVCGPRLF 189 Query: 190 WVSHGEHAEQEAA----LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 S E + + L +++ GKI+AIKGIGGFHL D N +V L K+R Sbjct: 190 LYSFVEKKHIDGSNLELLDRVCYEIEKGKIIAIKGIGGFHLVVDPYNKESVERLFRSKNR 249 Query: 246 PAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 KPLA++ + + +A ++ +P PI+L ++K L + L+ +G+ Sbjct: 250 EGKPLALVCKDIETVKKYCDVSEAEEEIFNSPRCPIILFERKTDHFL--HVNAGLHTLGI 307 Query: 300 MLPANP-LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 M P L ++L + + L+ TS NLSG P I ++AL L IAD L HNR IV+R Sbjct: 308 MRAYTPILDYILTKTNRDLLIATSANLSGIPMIIDEDEALEKLCDIADFVLYHNRKIVRR 367 Query: 359 MDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPP-VLCLGADLKNTFCLVRGEQAV 414 DDS V+++ ++R RG+ P L K V +L LG K T L + ++ + Sbjct: 368 CDDSVGFVLKDKFVLIRSGRGFAPITFKLKE--KAVDKNILALGGHEKTTIALKKEDEVI 425 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLPT 470 LSQ+LGDL + +L + ++YDF Y+ D H Y ++ + A++ N Sbjct: 426 LSQYLGDLDTKEYIDFYEGSLIDLISLYDFDFDYIACDYHKDYYTTSLAQKIAKDQNKEV 485 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH AH +C+ E I DG G+G +G +WG E ++ E + + Sbjct: 486 VFVQHHLAHIYSCMLEKNLQ----SCIGFAFDGTGLGLDGKIWGSEGFVIDGLEAKRVFH 541 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIERGINAP 589 L L GG A K+P R PE+ +++ Q + + N P Sbjct: 542 LQYYPLVGGQKAIKKPVRLAYYFSKIISPEFAESFFGGNEFLHQIFKT-----AQTFNYP 596 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP-RVDNQLDLA 648 L SS GR FD V LGC S+E + LE +A + M + + ++++ Sbjct: 597 LTSSMGRLFDIVGVLLGCGEKN-SFEAQIPMLLETIADRNENGFYIFLMNFKHEIEINIV 655 Query: 649 TFWQQWL-NWQAPVNQRAWA--FHDALAQ---GFAALMREQATMRGITTLVFSGGVIHNR 702 QQ + + + V++R + FH+ +A+ A ++RE +V SGGV N+ Sbjct: 656 DILQQIIHDIKRNVDRRIISAKFHNTVAKIVVEVAKVLRENYNK---DIVVLSGGVFQNK 712 Query: 703 LLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQ 734 LL ++ L + F + F P DGG+S GQ Sbjct: 713 LLLSKTVSLLEEEGFKVFFNTVFPINDGGISAGQ 746 >UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS78_CLOPH Length = 792 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 255/804 (31%), Positives = 370/804 (46%), Gaps = 95/804 (11%) Query: 17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ------HCPPLAR 70 VQGVGFRP V+ +A++ ++ G V N G VE+ FL + + + + + Sbjct: 2 VQGVGFRPLVYYIAKKHHIKGYVRNVGGYVEIMAVSSAADFLYFITELQMDHGNGSEIVK 61 Query: 71 ID--------------SVEREPFIWSQLPTE----FTIRQSTGGTMNTQIVPDAATCPAC 112 +D S+E E TE F I S + + PD CP C Sbjct: 62 LDIETLSANVESVNNVSMENESMENVSHTTEAYEDFVIIHSESSEEISILPPDLPVCPNC 121 Query: 113 LAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDR 172 E+N P +RY PFI+C CGPR+TII +PYDR T M + LC C +EY P R Sbjct: 122 QRELNDPANKRYHNPFISCVACGPRYTIIEELPYDRDNTTMVDYRLCEDCYEEYTSPDSR 181 Query: 173 RFHAQPVACPECGPHL--------------EWVSHGEHAEQEA---------------AL 203 R HAQ ++C +CGP+L + + +H +++ AL Sbjct: 182 RHHAQTISCNDCGPYLILQDNTDLILQDNTDLNKNNKHILKDSLGPIAEDNHRLINQQAL 241 Query: 204 QAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGL--- 260 A +K G I+A+KGIGG+H C AV LR K R KP AVM D + Sbjct: 242 HQAAEIIKSGGILAVKGIGGYHFVCSPFKEEAVVNLRRLKGREEKPFAVMFETIDSIREY 301 Query: 261 ---PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE----VGVMLPANPLQHLLLQE 313 + +LL T A PIVL+ Y+ D +AP N+ G LP PLQ LL ++ Sbjct: 302 CNVSEEEEKLLMTKARPIVLL---YMHR--DVMAPSTNKGSIYCGTFLPYTPLQILLTRD 356 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR---ESGEM 370 PL+MTSGN+SG P +E+ L+ G L + R IV+ +DDSV + ++ Sbjct: 357 CG-PLIMTSGNISGSPIIREDEKMLSLRSPYLQGVLYNTRRIVRSVDDSVAKIIDHKPQL 415 Query: 371 LRRSRGYVPDALALPPGFKNVPPVL-CLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQM 429 +RRSRG+VP + LP K PV+ G DLK +CL + AV+SQ+ GDL ++ + Sbjct: 416 IRRSRGFVPYPVFLPLEEKKASPVIFAAGGDLKAAYCLYKKGAAVVSQYFGDLEEESVLK 475 Query: 430 QWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQW 489 ++ + + + P V D HP Y S+ +A + LP V HHHAH A+ +AEH Sbjct: 476 EYIHSREDVSGLLKMKPTLAVCDMHPNYHSAHYAEALGLPLFKVQHHHAHIASVMAEHGL 535 Query: 490 PLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRN 549 VI + DG G G +G +WGGE L + L + GGD + K + Sbjct: 536 ---NDKVIGIAFDGTGYGTDGNIWGGEFLVCEGAQFTRAAHLSYTQVLGGDQSMKDARKT 592 Query: 550 LLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAP 609 A C + Y + + V+ A+E +N L SS GR FDAVA+ L Sbjct: 593 --ATCYLLKSGLEGY-----ITDERTEVIRAALEHKVNTVLTSSMGRLFDAVASLLDIGQ 645 Query: 610 ATLSYEGEAACALE-----ALAASCHG--VTHPVTMPRVDNQLDLATFWQQWLNWQAPVN 662 YEGE A LE A+ + G +T +T ++D + +A + Sbjct: 646 VN-RYEGECAANLEREAVLAIRENIKGTELTFAITPKGEIIEVDSDPLLRAICEQKAVTD 704 Query: 663 QRAWA--FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLL 718 RA A FH A+A + + SGGV N +L + L + FT+ Sbjct: 705 ARALALGFHYAVADMILNVCLRLRERYHTDRIAISGGVFQNSVLTEQTCRLLRENGFTVY 764 Query: 719 FPQSLPAGDGGLSLGQGVIAAARW 742 + ++P DG +SLGQ + ++ Sbjct: 765 YNLAVPPNDGCISLGQTYVGLMQY 788 >UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAA4_IGNH4 Length = 736 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 275/758 (36%), Positives = 372/758 (49%), Gaps = 54/758 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCN-DGDGVEVRLREDPETF--LVQLYQHCP 66 ++ +RG VQGVGFRP V +LA+ L L G V N G E+ + + E + L + P Sbjct: 5 RIVVRGLVQGVGFRPQVARLARGLKLKGYVKNVAGGAAEIYVIGEDEKISKFINLLKKLP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 P R++ ++ E ++ ++QI PD C CL EM P RRY Y Sbjct: 65 PPIRVEDLQAEDAEEMSFDDFIILKSDKSSYKHSQIPPDLGICEDCLREMLNPFSRRYMY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P I+C CGPRF++IR++PYDR T MA FP C C++EYRDP D R+H Q AC +CGP Sbjct: 125 PLISCAKCGPRFSMIRSLPYDRENTSMAEFPFCAECEREYRDPWDPRYHVQGFACAKCGP 184 Query: 187 HLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + + S G ++ A L G I+A+KG+GG+HLA A VA LR RK R Sbjct: 185 KVRLLDSEGRTVLVRDPIKEAAKLLDEGFIIAVKGMGGYHLAAKATEDEVVAELRRRKGR 244 Query: 246 PAKPLAVM---------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 P KP A+M + V D +L +P APIVL K+ L + +AP Sbjct: 245 PRKPFALMALNSEVANRIVVVDD-----EELFNSPEAPIVLFRKREDGPLSELVAPGHAL 299 Query: 297 VGVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 VGVM L +LLL +MTS N SGKP I+ E AL G+AD L H+R+I Sbjct: 300 VGVMRAYTGLHYLLLNYTADKFSIMTSANPSGKPTCITKECAL----GMADYVLEHDREI 355 Query: 356 VQRMDDSVVRES-GE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V R+DDSVVR S GE LRRSRGY P L + V GA+L+N + + Sbjct: 356 VHRVDDSVVRRSAGERLFLRRSRGYAPAWLEADEELLSGASV---GAELQNAGGISFSNK 412 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNL 468 VL+Q++GD + E LR + Y TP++V D HP Y S A E Sbjct: 413 VVLTQYIGDTDEYDNLRFMEEELRWLLKQYSVTPEFVAADLHPRYSSKLLALSLAEEFGA 472 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HHHAHAA+ +AE + A+ +DG G G +G WGGE LRVN + E + Sbjct: 473 ELVEVQHHHAHAASVMAEARLEE----AAAIVVDGTGYGLDGNSWGGEVLRVNREDFERV 528 Query: 529 GGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPEWQ-NYSETASVQQQNWSVLARAIER 584 L LPGGD A K P R LL + +W+ + + + V + + R Sbjct: 529 AHLEYFPLPGGDRAVKYPARALMGLLYAAGEDLEKWKGKLARALPGGEGEFEVARKVLGR 588 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT-MPRVDN 643 + L SS GR DA AA LG A SYEGE A LE AAS G P+T + +D Sbjct: 589 SV---LTSSLGRTLDAFAALLGVAYER-SYEGEPAMLLE--AASLGG--KPLTKLDLIDG 640 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 + T +W ++ + M +A G+ +V SGG N Sbjct: 641 NVIKVTELLRWAVEALDSGKKLRDVAFTIQYNLGYNMALKAAELGLPVVV-SGGAAVNEP 699 Query: 704 LRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + + L P +P GDGG++LGQ +IA+ + Sbjct: 700 FLLGVKEVVKP---LLPHKVPPGDGGIALGQLIIASRK 734 >UniRef50_UPI000197837F transcriptional regulatory protein HypF n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197837F Length = 827 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 259/820 (31%), Positives = 394/820 (48%), Gaps = 96/820 (11%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCPP 67 + + G +QGVGFRPFV+Q+A LNL G V N + + + L E FL ++ Q+ PP Sbjct: 22 IELFGIIQGVGFRPFVYQVATSLNLKGYVQNRYNSLYIYLESTLIQSEQFLQEILQNPPP 81 Query: 68 LARID--SVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEM-------- 116 A I ++ + PF+ + ST + +P D A C ACL +M Sbjct: 82 NAVIHAHTMHQVPFVTPPYSDFRILASSTEKQDDKLFLPQDVAICQACLQDMGCNTGQDI 141 Query: 117 ------NTPGERRYR-YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 N+ R++ Y F C++CG R +II A+PYDR T M F C C++EY P Sbjct: 142 KQDTKQNSRQNPRFQDYAFTTCSYCGARHSIIHALPYDRTNTSMREFKKCKDCEREYHTP 201 Query: 170 LDRRFHAQPVACPECG-------PHLE--WVSHGEHAEQEAALQAAIAQLKM-GKIVAIK 219 +RRFHAQP++C +C P L+ ++ A + L A +AQ M GKI+AIK Sbjct: 202 TNRRFHAQPISCNQCAIRMRLIIPSLKQSYIFAYPKATSDILLLALVAQKIMEGKIIAIK 261 Query: 220 GIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLP-------VADGLPDAARQLLTTPA 272 GIGGF+L A N A+ +L+ RK+R KP A+M VA+ + ++ RQ L +P Sbjct: 262 GIGGFNLIASATNIQAIMSLKKRKNRSKKPFAIMFKNLQDIASVAE-INESERQALLSPQ 320 Query: 273 APIVLVDKKY-----------------VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQ 315 APIVL++K + + + IAP ++ +G +LP N + HLL + L Sbjct: 321 APIVLLNKHFHNRQHNRSHNKRENAILSSQALELIAPQVSSIGAILPYNGIMHLLFRFLN 380 Query: 316 CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR-ESGEM--LR 372 PL+ TS N+SG P ++ + L G+ D L ++R+I +DDS++R +GE+ LR Sbjct: 381 TPLIFTSANVSGTPIITKLDELMEKLSGVFDMVLDYDREITHALDDSIMRFMAGELRPLR 440 Query: 373 RSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWR 432 SRG+ P L LP G K + L LGA K++ +V + ++S + GDL + ++ Sbjct: 441 LSRGFTP--LFLPFGSKKL--CLSLGAQQKSSLSIVY-KNTLISPYFGDLHNVDSICRYE 495 Query: 433 EALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL------------------ 474 + L+ ++Y P+ +V D HP Y S+ A+ NL T L Sbjct: 496 KELQFFLSLYVNKPKVIVSDLHPQYASTHLAK--NLTNNTALLDSATDSATSLDSPQFLQ 553 Query: 475 --HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN--YRECEHLGG 530 HH AH A LAE + G + DG G+GE+G +WGGE + ++ + Sbjct: 554 ISHHKAHFYAILAESNALNNDG--FGIIWDGTGLGEDGGIWGGEGFIYDSKHKSMSRIFS 611 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 L AL GG+ + K+ R L + + QN + +++N S+L A E + Sbjct: 612 LKPFALLGGEGSIKEIGRLALGLLWSYGIQTQNLATKNIEKRENISLLQNAFESKVFLQ- 670 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 SS GR D VA LG SYEG++ LE+ A P + ++D Sbjct: 671 TSSMGRLIDCVACLLGILEVQ-SYEGQSGALLESYALRERAEVSPYPFKIDNGEIDCKAM 729 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 ++ L Q + A F + LA A M E+ + FSGGV N+ L R+ Sbjct: 730 IEEILKTQDKA-KGAKRFLETLAY-MALEMSEKVLKTKRVRVYFSGGVFQNKFLCDRIHT 787 Query: 711 YLADFTLLF--PQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 + + F + LP D +S GQ V + G+V+ Sbjct: 788 LFKEHNIPFYMHKILPCNDFSISFGQAVCGSMEQNKGDVK 827 >UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR00_9FIRM Length = 769 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 254/764 (33%), Positives = 388/764 (50%), Gaps = 66/764 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 +L + G+VQGVGFRP V ++A++L L G V N G VE+ + RE + FL L Q Sbjct: 8 RLSVAGRVQGVGFRPSVCRMAKELKLTGTVQNLGGEVEIYITGTREKIDAFLCGLKQMER 67 Query: 67 PLARIDSVERE--PFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 P A ++ V+RE P T R+S N + P D + C ACL EM T G RR Sbjct: 68 P-ALVECVKREERPLTPFSAFTSIPSRESE----NKILAPADISVCSACLKEMKTQGNRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YP+I+CT CGPR+T+++ +PYDR T A+PLC C +EYRD +RR H + +AC + Sbjct: 123 CHYPYISCTACGPRYTVLKKLPYDRENTAFDAYPLCDKCYEEYRDMNNRRCHGETIACHD 182 Query: 184 CGPHLEWVSHGEHA----EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGP L G + QE LQ+A L G+I+ +K +GG++L C +AV L Sbjct: 183 CGPRLLAKMRGSLSAGPWSQEELLQSAKDLLFHGEIIMVKSVGGYNLVCRGDRDDAVQRL 242 Query: 240 RARKHRPAKPLAVMLPV---ADGLPDAAR---QLLTTPAAPIVLVD--KKYVPELCDDIA 291 R K R KP A+++ A+ L +R +LL +P PIVL+ KK +P + + Sbjct: 243 RVLKQRRDKPFALLVATVGEAEKLCHISREEKELLESPQKPIVLLKRRKKSMPLISPAVT 302 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG--IADGFL 349 +GV LP L + LL E++ PLV+TS N +G+P A A + Sbjct: 303 ELTESLGVFLPPFGL-YALLAEIKIPLVVTSCNFTGEPIIYKQADAFAFYESHESISALF 361 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 R+I++ DDSV R + ++LRR+RGY+P+ +A+ K VL LG +++ +F Sbjct: 362 YDEREILRPADDSVTRIAAGAVQILRRTRGYMPEPVAVE---KKGMRVLALGGEVEPSFA 418 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV----SSQW 462 L +Q DL+ + +R + + + +P +V D HP Y S + Sbjct: 419 LSVNNLIYSAQVPSDLTLEKSSAFYRRLVADWEELLHISPDILVCDLHPCYTTAEESRKL 478 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A+++++P V HHH HA + +AEH LD G +A+ DG G G +G +WGGE L Sbjct: 479 AKKLDVPVLEVQHHHGHALSVMAEHH--LD-GKCLAVIFDGTGFGTDGTVWGGEFLLCED 535 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQNWSVLARA 581 R +G + +++ D + +Q W++LL + +P + +V+ A Sbjct: 536 RSFIRVGAVKPISMISSDESVRQAWKSLLCHLVHSGIPS----------DDKRAAVVKAA 585 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE---ALAASCHGVTHPVTM 638 + G+N +SS GR FDAV+AALG A +Y+G A LE ALA + ++ Sbjct: 586 VAGGLNTVKSSSMGRLFDAVSAALGLADYN-TYQGRCAMLLENQAALAKRERKIPTELSF 644 Query: 639 PR--VDNQLDLATFWQQWLNWQAPVNQR----AWAFHDALAQGFAALMREQATMRGITTL 692 V+ + TF+ W+ + A FH+A+ + ++ + G+ T+ Sbjct: 645 NEEVVETENGSVTFFDPAPLWEKVTGEDKAAAALGFHEAVIR----IVERMSEKTGVETV 700 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 + SGG NRLL L + + Q+LP GDGGL+ GQ Sbjct: 701 ILSGGCFANRLLLEGCVEALKGKGHAVYWNQALPPGDGGLAFGQ 744 >UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Thermoproteaceae RepID=A1RR07_PYRIL Length = 748 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 271/751 (36%), Positives = 382/751 (50%), Gaps = 45/751 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLR-EDPETFLVQLYQHCPPL 68 + I G VQGVGFRP+V LA QL L G V N G G VE+ + E FL L P Sbjct: 7 IHIIGIVQGVGFRPYVKILADQLGLSGYVKNLGGGEVEIYVEGERSREFLDSLLNGRPKA 66 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYP 127 I+ + R + + FTI +S+ ++P D A C CL E+ ERR RYP Sbjct: 67 IYIEDI-RVIEVAPRGVRGFTIEKSSQEVETVSMIPPDLAICDECLREVLEGDERRRRYP 125 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPL---DRRFHAQPVACPEC 184 F +C+ CGPRF+II+ +PYDR T AFPLC C +EY DP RRF+ Q ++C Sbjct: 126 FNSCSFCGPRFSIIKKLPYDRENTSWTAFPLCDKCTREYNDPKVGGIRRFYYQGISCKND 185 Query: 185 GPHLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP ++ + S GE + + A + G IVA+KG+GGFH+ A + + VA LR RK Sbjct: 186 GPQVKLLDSTGEPIDVGDPISEASRLINEGYIVAVKGVGGFHIFALASDDDVVAKLRKRK 245 Query: 244 HRPAKPLAVM---LPVADGLP---DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP +P A+M L A L A +LLT+P PIVL+ K+ ++P L++ Sbjct: 246 KRPTQPFAIMALDLETAGRLAVVNKTAAELLTSPQRPIVLLFKREDSPASPLVSPGLDKE 305 Query: 298 GVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 G+ LP LQ+LLL E++ + TSGN+ G+ P ++ + +A L G+AD L H +IV Sbjct: 306 GIFLPYTALQYLLLSEIRDKFAIATSGNIHGE-PMCTDWRCVAKL-GVADYILDHTLEIV 363 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R+DDSVVR + +LRR RGY P + P + + GADL+ + G++A Sbjct: 364 HRVDDSVVRFTAGRPTLLRRGRGYAPVWIKTP--LRLGRAAVAFGADLQTAGGVGIGDKA 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS----SQWAREMNLP 469 +L+Q++GDL LR + Y +V D + Y S +WA E N Sbjct: 422 ILTQYIGDLDSFKALEDLDRELRWLVQTYRLREFVLVCDLNQTYNSHRLCREWAEEFNAE 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAHA A A+ +A+ +DG+G+GE+GA WGGE L V+ E + Sbjct: 482 IYMVQHHHAHALATAADVGV---AEPFVAVAIDGVGLGEDGAAWGGEVLYVDGARYERVR 538 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ------NWSVLARAIE 583 L V +PGGDLAA +P R LA ++ E + E + ++ ++AR ++ Sbjct: 539 HLAYVPMPGGDLAALRPARMALAYLFKYFGEDWDLVERLKLAERLPGGLSEAQIVAREVK 598 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN 643 + + SS GRF DAVAAALG A +YEGE A LEA AA + ++ Sbjct: 599 K--SRLYTSSVGRFLDAVAAALGVAWER-TYEGEPAIRLEATAAGGR-----LIELEAED 650 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 Q++L + A V A+ L Q E A +G+ +V GG N Sbjct: 651 QVELFGQLIELYLKGADVKDLAYTAQYKLGQILGKWACETAERKGVRHIVVGGGAAVNDY 710 Query: 704 LRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 + A L L P P GDGG++LGQ Sbjct: 711 IIAGLESVCGRAAL--PSKTPPGDGGIALGQ 739 >UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea RepID=A2BKU6_HYPBU Length = 771 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 274/771 (35%), Positives = 396/771 (51%), Gaps = 46/771 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCN-DGDGVEVRLREDPET---FLVQLYQH 64 +++R+ G VQGVGFRPFV +LA++L L G V N G VE+ + P++ F+ L + Sbjct: 7 LRVRVVGLVQGVGFRPFVHRLAERLGLAGYVRNMGGSEVEILVEGPPDSLRLFVSLLEKE 66 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERR 123 PP A I+ + EP L T F I +S+ ++P D C C E+ PG R Sbjct: 67 KPPPAIIEEMRVEPVPARGL-TVFRIEKSSRSRKERSMIPPDFGICDWCAREVLEPGTRF 125 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVACP 182 YRYP+ +C CGPRF+++ +PYDR T M FP C C ++Y D + RR+HAQ +CP Sbjct: 126 YRYPWTSCAWCGPRFSMMYDIPYDRENTAMREFPFCEECRRDYEDMGNIRRYHAQGFSCP 185 Query: 183 ECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + GE + E + A + G IVA+KG+GGFH+A A + VA +R Sbjct: 186 RCGPKTILLDGRGEPLDVEDPVAEAARLIDEGHIVAVKGVGGFHIASLATDDEVVARVRR 245 Query: 242 RKHRPAKPLAVML---PVADGLP--DA-ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 K RP +PLA+M VA GL DA A QLL +P PI+L+ K+ + +AP L+ Sbjct: 246 IKSRPTQPLALMARDCSVAAGLVALDAHACQLLRSPRRPILLLPKRDDAPVSPLVAPGLD 305 Query: 296 EVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 +G+MLP L LLL ++ LVMTSGN G P + E L L G D L HNR+ Sbjct: 306 TLGIMLPYTGLHLLLLHMVRDGFLVMTSGNRHGMPMCRTVECILDQLGGEIDYILTHNRE 365 Query: 355 IVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV R+DDSVVR + +LRR+RGY P+ + + ++V + +GADL+ + + Sbjct: 366 IVHRVDDSVVRFTAGKPVLLRRARGYAPEWIRIS---RSVGEHVAVGADLQTAGAVSFDD 422 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--LP 469 + VL+Q++GDL + G + E L+ + +Y P V D HP Y S + A +++ L Sbjct: 423 KVVLTQYIGDLDEPGQLEELEEELKWLIRVYGLRPSSVALDMHPAYESRRLAAKLSEELD 482 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVI-ALTLDGIGMGENGALWGGECLRVNYRECEHL 528 + V H HA A A LD D + A+T+DG G G +G +WGGE + E Sbjct: 483 AEPVEVQHHHAHAVAAAADAGLDPWDYVPAVTVDGAGYGVDGVIWGGEAMIAGAEGFERT 542 Query: 529 GGLPAVALPGGDLAAKQPWRNL---------LAQCLRFVPEWQNYSETASVQQQNWSVLA 579 G + LPGGD A K+P R L L + L+ + + + + S ++ +V + Sbjct: 543 GTIKPFPLPGGDTATKRPLRILIGILSQGWGLDEILQLLEKMGHLGKGISEEE---AVTS 599 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + R PLASS GR DAV+A LG +YEGE A LEA A G P P Sbjct: 600 YKLARSNRTPLASSAGRLLDAVSALLGLR-YRRTYEGEPAIVLEAYARRHGGKPLPDEPP 658 Query: 640 RVDNQLDLATFWQQWLNWQA-PVNQRAWAFHDA------LAQGFAALMREQATMRGITTL 692 + A + L W + + +H A + + A + E L Sbjct: 659 ATSYKGLSALDPLRVLEWVVEKLEEGVEPWHLAATVMYWVGRHLAETVLENYDGARDKPL 718 Query: 693 VFSGGVIHNRLLRARLAHYLADF--TLLFPQSLPAGDGGLSLGQGVIAAAR 741 + SGG N + A + T+ P +P GDGG++LGQ ++AAA+ Sbjct: 719 LISGGAAVNDYIYMGAADAAKAYGRTVHIPGKVPPGDGGIALGQIIVAAAK 769 >UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfurococcaceae RepID=A3DKG9_STAMF Length = 778 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 260/778 (33%), Positives = 385/778 (49%), Gaps = 68/778 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCN-DGDGVEVRLREDPET---FLVQLYQHCPPL 68 I G VQGVGFRPF+ +LA + L G V N G VEV + PE+ F+ LY PP Sbjct: 9 IIGLVQGVGFRPFIHRLAVKHGLKGYVRNIGGSEVEVWVEGSPESIDKFIEDLYVEKPPP 68 Query: 69 ARIDSVEREPFIWSQLPTEFT----IRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 A I+ V FI P + ++ S + I PD A C CL E+ P +RRY Sbjct: 69 AIIEDV----FIEDVEPRGYVDFHILKSSREAVKRSNIPPDLAICKDCLREILDPNDRRY 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVACPE 183 RY F +C CGPRF++I +PYDR T M+ + LC C+KEY D + RR+HAQ ++C Sbjct: 125 RYAFNSCAWCGPRFSMIYRVPYDRSNTSMSKYILCSECEKEYHDIRNVRRYHAQGISCSV 184 Query: 184 CGPHLE-WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP L + + E+ E + + G IV +KG+GG+H+A A + V LR R Sbjct: 185 DGPKLYLYTNDWEYVETRDPIIETAKLIDEGYIVGVKGLGGYHIAALATSDGVVLKLRKR 244 Query: 243 KHRPAKPLAVM---LPVADGL---PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 KHRP KP A+M + V + L + AR +L +P API+L+ K+ + ++P L+ Sbjct: 245 KHRPTKPFAIMGLDISVLERLVYIDEEARSILESPQAPILLLPKREDSPVSKYVSPGLSH 304 Query: 297 VGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 GV + L +LLL E + L+MTSGN++G+P I+ E A L + D FLIH+R+I Sbjct: 305 EGVFVAYTGLHYLLLMETRDKFLIMTSGNVTGEPMCINEECAREKLSRVVDYFLIHDREI 364 Query: 356 VQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V R+DDSV+R + LRRSRGY P + + + GADL NT L ++ Sbjct: 365 VNRVDDSVLRNTNGKWVFLRRSRGYAPMWIRIRSDLDG--EYIAFGADLNNTGALGFEDK 422 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIY--DFTPQYVVHDAHPGYVSS----QWAREM 466 VL+Q++GDL Q + + + Y + V+ D HP Y S ++A + Sbjct: 423 VVLTQYIGDLDSFNAQRELLKYIGFFIENYRINLDKTIVIVDKHPSYHSRRLGMEFAEKH 482 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL-----RVN 521 LP V HH+AH ++ G+V+ + +DG+G G++ +WGGE L + + Sbjct: 483 RLPIIEVQHHYAHVLGTAYDNGLE---GEVLGIAMDGLGWGDDNTIWGGEILVFNTDKYD 539 Query: 522 YRECEHLGGLPAVA---------LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ 572 Y+ H+ LP + + G L+++ + + ++ V E ++ A ++ Sbjct: 540 YKRLGHIEKLPLTSDRDTIYPLRILAGYLSSRGHVFEEIHKLIKNVLENIDHRLVAEMEL 599 Query: 573 QNWSVLA-RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASC 629 + V A R IE ASS GRF D ++A LG SYEGE A LEA+A A Sbjct: 600 VHKLVKAGRYIE-------ASSTGRFLDMISAILGVCLYR-SYEGEPAIKLEAVADKAKS 651 Query: 630 HGVTHPVTMPRVDN--QLDLATFWQQWLNWQAPVNQRAWAFHDAL-AQGF--AALMREQA 684 H + + + L+ + + N A L + G+ L + Sbjct: 652 HKLLEHFHISTHNGLYVLEYKDLIEHLIYNNVRDNSVAETAKSILYSYGYWMGKLAHKLI 711 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAA 740 R I +V SGG N + L L + L L P+ +P D G+S GQ VIA + Sbjct: 712 KGRRIDHIVVSGGAAVNTYIIKGLEDSLGEHDLEPLLPRRIPPNDEGISFGQ-VIAGS 768 >UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPB6_9CHRO Length = 837 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 292/810 (36%), Positives = 395/810 (48%), Gaps = 97/810 (11%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDP--ETFLVQLYQHCPP 67 L RG VQGVGFRPFV +LA+ L+L G+V N V V L+ E P E FL +L P Sbjct: 8 LHCRGTVQGVGFRPFVHRLARALDLVGEVENVAGAVRVDLQGERPALEQFLGRLGSELPA 67 Query: 68 LARIDSVE-REPFIWSQLPTEFTI-----RQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 AR++ ++ R S+ P I R G + +V D A CPACLAE+ P + Sbjct: 68 PARLEPLQPRWLPPLSRPPRAVRIAAAAPRPLGAGLIAQALVADRAPCPACLAELADPTD 127 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPFI+C CGPR++I A P+ R T +AAFPLC AC E+ DP DRRFHA+ + C Sbjct: 128 RRHGYPFISCAACGPRYSIATAEPFARAHTTLAAFPLCAACRSEFEDPADRRFHAETIGC 187 Query: 182 PECGPHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P CGP L+ ++ + AA L+ G I+A++G+GGF L +A AV L Sbjct: 188 PACGPRLQLLAAAPDTLPAGRDPIAAAADLLRAGGILALQGVGGFQLLVEATRQEAVQRL 247 Query: 240 RARKHRPAKPLAVMLPVADG--------LPDAARQLLTTPAAPIVLVDKKYVPELCDD-- 289 R RK RPAKP A++ VAD + +A +LL +PAAPIVL+ +++ P+ Sbjct: 248 RRRKSRPAKPFALL--VADPAWLEPQVRIGEAEIRLLRSPAAPIVLLRRRHDPQALQGPA 305 Query: 290 -------IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ 342 +AP +GVMLPA+PL LL+ + PLV TSGN SG+P I +A L Sbjct: 306 AMVVAEAVAPGSPALGVMLPASPLHRLLVAAVGRPLVATSGNPSGEPLCIDPLEARQRLA 365 Query: 343 GIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPP-----V 394 GIAD FL+HNR I + +DDS+V+ +LRR+RG+ P AL LP +PP Sbjct: 366 GIADAFLLHNRPIARPLDDSLVQLIDGRPVLLRRARGHAPAALDLP-----LPPPADHAA 420 Query: 395 LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREAL-RLMQNI------------ 441 L LG DLK L RG Q ++ + GDL+ Q + L L+Q + Sbjct: 421 LALGGDLKAAPALARGGQIWVAPYQGDLAGARQQRAVEQGLDELLQTLGLGGAPPDGDSP 480 Query: 442 YDFTPQYVVHDAHPGYV----SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 497 + +V DAHPGYV +++ A+ Q V HH AH A AEH G ++ Sbjct: 481 VGASAPLLVADAHPGYVGTALAARLAQRYGTALQHVQHHRAHGLAVAAEHGL---AGPLL 537 Query: 498 ALTLDGIGMGENGA--LWGGECLRVN-YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC 554 DG+G G LWGGE L ++ + L L LPGG+ A ++ R L Sbjct: 538 VWAADGLGYGPGPGPQLWGGELLLLDGAGAAQRLACLRPWPLPGGERAMRECRRTALGLL 597 Query: 555 LRFVPEWQNYSETASVQ----QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPA 610 L P ++ A+ + +LA A+ G NAP ++ GR FDAVA+ L Sbjct: 598 LAADPALLHHPGAAACRGAFSPAERQLLAAAVAGGCNAPRTTALGRLFDAVASLLDVL-Q 656 Query: 611 TLSYEGEAACALEALAAS--------CHGVTHPV--TMPRVD-NQLDLATFWQQWLNWQA 659 SYEGEA LE LA PV +P V + WL+W+ Sbjct: 657 EQSYEGEAGLRLEGLARRRDQAAENPSLAAEEPVGALLPLVPVPPAEAPDLPLGWLDWEP 716 Query: 660 PV-------------NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 + A FH AL A A + G + +GG N LL Sbjct: 717 LLRRLLDALAAEAAPESLASGFHHALTASLVAAAARAAELSGCRRVALAGGCFQNALLLE 776 Query: 707 RLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 L A + + LP DGGL+LGQ Sbjct: 777 GCIAGLRRAGLQPCWSEQLPCNDGGLALGQ 806 >UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter hepaticus RepID=Q7VJB7_HELHP Length = 807 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 257/794 (32%), Positives = 376/794 (47%), Gaps = 72/794 (9%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGV----EVRLREDPETFLVQLYQHCP 66 + + G +QGVGFRPFV++LA ++ L G V N + + EV R + F+ + P Sbjct: 6 IELFGIIQGVGFRPFVYRLAHKMGLKGYVQNRYNTLFICLEVPTRAILDEFITHILSSPP 65 Query: 67 PLARIDSVEREPFIWSQLPTE-FTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERR 123 P A I P + ++ F IR+S + + T + D C CL +M ER Sbjct: 66 PNAHIVQHSVTPISTPHILSDYFEIRESISYSTSLPTSLPLDTRICEQCLDDMKGK-ERF 124 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y F CT CG R++II+A+PYDR T M+ F LC C EY +PL+RRFHAQP +C + Sbjct: 125 LNYAFTTCTECGARYSIIKALPYDRIHTSMSDFALCKDCQSEYDNPLNRRFHAQPNSCHQ 184 Query: 184 CGPHLEWV-------SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 C + + S + + L+ + ++K GKIVAIKG+GGF+L +A N + Sbjct: 185 CAIQMRVIDECGTIHSFSQSQDDIKLLKLIVQKIKAGKIVAIKGVGGFNLVANASNVQVI 244 Query: 237 ATLRARKHRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKY-----VPE 285 TLR RK+RP KP AVM + A ++ L +P APIVL+++ + + E Sbjct: 245 KTLRNRKNRPHKPFAVMFKNLQDISSVAHINEEEKRALLSPQAPIVLLERHFKSEGIINE 304 Query: 286 LCDD-IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE---QALADL 341 C + IAP + VG +LP N + HLL L PL+ TS NLSG+P + Q L Sbjct: 305 ECFNLIAPQIQSVGAILPYNGIMHLLFTLLDMPLIFTSANLSGEPIITHAQELRQKLGGA 364 Query: 342 QGIADGFLIHNRDIVQRMDDSVVR-ESGEM--LRRSRGYVPDALALPPGFKNVP------ 392 + D L +NRDI +DDS+VR +G+M LR +RGY P +L K+ Sbjct: 365 NAVYDVMLDYNRDICNPIDDSIVRFMAGKMRILRLARGYAPASLGFKAPLKDTSLLAQEE 424 Query: 393 ----PVLCLGADLKNTFCLVR-----GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD 443 ++ +GA K+T + QAV+S ++GDL ++++ +Y Sbjct: 425 VQNGIIVGVGAQQKSTLSFINISWNADYQAVISPYIGDLHSVDSLIRYKLHYDFFTRLYM 484 Query: 444 FTPQYVVHDAHPGYVSSQWAREMNLP-TQTVL--HHHAHAAACLAEHQWPLDGGDVIALT 500 + V D HP Y S+ +A E+ Q L HH AH A LAE + G I + Sbjct: 485 QEIKAVGCDLHPSYASTHFATELEAQGAQKYLLSHHKAHFYAILAESNALEESG--IGII 542 Query: 501 LDGIGMGENGALWGGECLRVNYREC----EHLGGLPAVALPGGDLAAKQPWRNLLAQCLR 556 DG G+GE+ +WGGEC C E + L GG+ A K + LA L Sbjct: 543 WDGTGLGEDKHIWGGECFIYQPDMCVGTMERVWHFEEFTLLGGESAIKDIGK--LALSLM 600 Query: 557 FVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + +N ++L + + GI P SS GR FDAVA LG +YEG Sbjct: 601 WHYGLENVQNRVHFSPAELALLQNSFKSGI-YPQTSSVGRIFDAVAYLLGLLEVQ-TYEG 658 Query: 617 EA-----ACALEALAASCHGV-THPVTMPRVDNQLDLATFWQQWLNWQAP--VNQRAWAF 668 ++ +CAL A GV P + + L Q ++ + V + A F Sbjct: 659 QSGAIIESCALRDYAKCTEGVDIEPYSFELAKGVISLRGIIQGVIDEREKQGVERAAHRF 718 Query: 669 HDALAQGFAALMREQATMRGI-TTLVFSGGVIHNRLLRARLAHYLADFTLLF--PQSLPA 725 LA AL ++ + + I + FSGGV N+ L R+ A + F + +P Sbjct: 719 LHTLAHIALALAQKCSQHKNIPLKVYFSGGVFQNKFLCDRIHTLFAKNHIPFYMHEKMPC 778 Query: 726 GDGGLSLGQGVIAA 739 D +S Q V A Sbjct: 779 NDASISFAQAVFCA 792 >UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE4_9FIRM Length = 634 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 225/531 (42%), Positives = 287/531 (54%), Gaps = 39/531 (7%) Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 M P RRYRYPFINCT CGPRF+IIR +PYDRP T MA F +CP C EY D RR+H Sbjct: 1 MQDPHGRRYRYPFINCTDCGPRFSIIRRLPYDRPATTMAGFAMCPDCAAEYGDIRSRRYH 60 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 AQP CP CGP + + A L GKIVA+KG GG HLAC A + +A Sbjct: 61 AQPNCCPVCGPRAIYRDAAGKPVAGDPIALAQKALAAGKIVAVKGTGGIHLACRADSPDA 120 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDAAR---------QLLTTPAAPIVLVDKKYVPEL 286 VA LR RKHRP KPLA+M A L AAR LL +P PI+L+ KK Sbjct: 121 VARLRRRKHRPEKPLALM---ARDLSTAARFCRYTEEEAALLQSPRRPILLLAKK--DPT 175 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQ-ELQCP--LVMTSGNLSGKPPAISNEQALADLQG 343 +GVMLP PL LLL P LVMTS N SG P + NE A++ LQG Sbjct: 176 GQTWLSATTRLGVMLPYTPLHILLLDGTFGGPDLLVMTSANRSGCPVLLDNEDAVSALQG 235 Query: 344 IADGFLIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 IADGFL+H+R I R DDS+ R + RRSRGY P L L ++V VL GA+ Sbjct: 236 IADGFLLHDRPIANRCDDSLAMVWRGAPVFFRRSRGYAPQPLLLD---RDVTGVLAFGAE 292 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 K +F RG A +SQ++GDL + + AL +++ P +V D HP Y S+ Sbjct: 293 QKGSFAAGRGRHAFVSQYIGDLKNAETLDHYCTALTGTLSLFGLQPTVLVCDLHPDYAST 352 Query: 461 QWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGE 516 + A EM +LP + V HH AH AAC+A+++ G V L DG G+GE+G++WGGE Sbjct: 353 REAEEMAARQHLPLRRVQHHWAHMAACMADNRLE---GPVFGLIWDGTGLGEDGSIWGGE 409 Query: 517 CLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQNW 575 L +Y+ +G L VALPGGD R L+ L PE + A +++ Sbjct: 410 YLVGDYQHYHRVGSLRPVALPGGDACIAGIGRTALSLALDAGCPE----AAPAFARREGV 465 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 + L ++ R + +S GR FD V + L Y+G+A LEALA Sbjct: 466 TALLKSGYRCVQ---SSGMGRLFDGVYSLL-TGRTDADYDGQAPALLEALA 512 >UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter RepID=Q1CVB1_HELPH Length = 769 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 243/756 (32%), Positives = 370/756 (48%), Gaps = 45/756 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL-REDPETFLVQLYQHCPPL 68 ++ + G VQGVG RPF++ LAQ+L L G V N +E+ L E+FL L + PPL Sbjct: 22 KITLFGVVQGVGMRPFIYTLAQKLELVGFVRNTQAALEIILPAHQTESFLNALKKGLPPL 81 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERRYRY 126 A ++ + P+ + F I +S +N +QI D C CL E+ + Y Sbjct: 82 ALVEKITISPYDKALHFNGFRILESKNHPLNLLSQIPKDLGVCKDCLHEIRDKNSPYFHY 141 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F +C CG R++++ A+PYDR + + F LC C Y+DP ++RFH Q ++C +CG Sbjct: 142 AFNSCAKCGARYSLLNALPYDRENSALKPFKLCEFCASIYQDPTNKRFHIQGISCKKCGI 201 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + + AL ++ GKI+A+KG+GGF L CDARN + LR K+RP Sbjct: 202 VLNY----KRFKNDDALLECAKDIQKGKIIALKGLGGFALLCDARNFQTIERLRLLKNRP 257 Query: 247 AKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 KP A+M + + A + L++ +API+L KK +L +IA + + GV+ Sbjct: 258 LKPFALMFKDLNSVKQHAFLNALECESLSSISAPILLARKKPDTQLAPNIAKNSSFYGVI 317 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD-LQGIADGFLIHNRDIVQRM 359 LP PL LLL L P+V TS N S P ++N++A D L I D L HNR I+ R+ Sbjct: 318 LPYTPLHALLLDLLDFPIVFTSANFSSLP--LANDEAEIDALSFIFDFKLTHNRAIIHRI 375 Query: 360 DDSV---VRESGEMLRRSRGYVPDALALPPGFK-NVPPVLCLGADLKNTFCLVRGEQA-- 413 DDS+ + + +R +RG+ P L LP + +L LGA+ K F L+ E + Sbjct: 376 DDSIAQCIDNAIRPMRLARGFAPLYLTLPKRSNGSQKKILALGAEQKGHFSLLDSETSTL 435 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 +LS GDLS + ++E L YDF P + D H Y +++ A + N P V Sbjct: 436 LLSPFCGDLSVLENEKHFKETLNFFLKTYDFKPTLLACDKHKNYTTTKMAFDFNTPLLQV 495 Query: 474 LHHHAHAAACL--AEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 HHHAH A + A Q P I + DG G EN ++G EC + E + Sbjct: 496 QHHHAHFLASILDALLQDPHLNHPFIGIVWDGSGAYEN-KIYGAECFVGDLERIEEMARF 554 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 L GG A K+P R +L L+ ++ + + ++ I + Sbjct: 555 EEFLLLGGQKAIKEPKRLVLEIALKHQLNKLLKRVQKHFKEDELEIFQQMHDKKIQSIAT 614 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPVTMPRVDNQLDLATF 650 +S GR FD VA +L T+S+E E+ LE LA + +P T+ ++ + L F Sbjct: 615 NSIGRLFDIVAFSLDLT-GTISFEAESGQVLENLALQSDEIAFYPFTIK--NSVVCLKDF 671 Query: 651 WQQW---LNWQAPVNQRAWAFHDALAQGFAALM---REQATMRGITTLVFSGGVIHNRLL 704 +Q + L P A F ++L + AL+ +E +V SGGV N+LL Sbjct: 672 YQAFEKDLGVLEP-KHIAKKFFNSLVEIITALIAPFKEH-------VVVCSGGVFCNQLL 723 Query: 705 RARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIA 738 +LA L F + P D + +GQ ++A Sbjct: 724 CEQLAKRLRGLKRQYFFHKHFPPNDSSIPIGQALMA 759 >UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phymatum STM815 RepID=B2JX90_BURP8 Length = 769 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 272/773 (35%), Positives = 362/773 (46%), Gaps = 70/773 (9%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ + G VQGVGFR FV +LA+ NL +VC +GV + +R + + F L + P Sbjct: 6 RVEVSGIVQGVGFRSFVRRLARHFNLSVEVCKGTNGVPIDIRGEGRNLDAFRAALAEQPP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPD-AATCPACLAEMNTPGERRYR 125 LA ID+ R S F I +ST + +P +A C+ E+ T G RR+R Sbjct: 66 LLAHIDAARRTAGTPSPAMRYFCIAESTEAVTSQSCIPAYSALRDMCIDELFTEGGRRWR 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 +PFI CT CGPR +I PY R T M AF LC C EY D DRRFHA+ +AC ECG Sbjct: 126 HPFICCTDCGPRDALIHRTPYHRAHTSMTAFALCERCAAEYSDLADRRFHAETMACTECG 185 Query: 186 PHLEW---VSHGEHAEQEAA----LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 P L + + G A + + + A A + G+IVA+K + GF L C A N AV Sbjct: 186 PTLRFRPPSARGYAAPRSGSPMDPVARAWATIARGEIVAVKRLDGFQLICHATNPAAVER 245 Query: 239 LRARKHRPAKPLAVMLP-VADG-----LPDAAR-QLLTTPAAPIVLVDKKYVPELCDDIA 291 LR RK RP KPLA+++P VA L DA+ +LL + PIV+ + Sbjct: 246 LRERKRRPTKPLALLVPKVASAAQWVDLGDASNAKLLASAIRPIVVSRR----------- 294 Query: 292 PDLNEVGVMLPANPLQHLLLQELQ--------------CPLVMTSGNLSGKPPAISNEQA 337 LN +G MLP+ P+Q+LL Q V S NLSG+P + Sbjct: 295 --LNRLGPMLPSTPIQYLLFHRAQGLPSGTRWLGEAQPTIRVPASANLSGEPLLSDSADV 352 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVRESGEM----LRRSRGYVPDALALPPGFKNVPP 393 L IA+ L H+R+IV R DDSVV + + LRR+ VP + LP + P Sbjct: 353 GEALADIANAVLDHDREIVSRCDDSVVLAAHPLPAITLRRACRSVPKPVPLP---TDGPS 409 Query: 394 VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDA 453 VL LGA +K+T L G A + +LGDL G+ E ++ TP + D Sbjct: 410 VLALGAQMKSTVTLTGGRLADVLPYLGDLRSLGVCELLEETVKHHVFRMHVTPAAIACDL 469 Query: 454 HPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN 509 P S++ A + ++P + HHHAH AA LAE+ G + L LDG G G++ Sbjct: 470 QPDLYSTRLAETLVDCWSVPLLGIQHHHAHVAAVLAENA---HTGPALGLALDGFGWGDD 526 Query: 510 GALWGGECLRVNY-RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 G WGGE LRV + LG L + LPG D A WR A PE + S Sbjct: 527 GNAWGGELLRVESGGRAQRLGHLSRLPLPGADAADHASWRMAAALLHTLKPEARRLSP-- 584 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 + L IERG N P + GR+FDA+A G P TL +EGEAA LEAL Sbjct: 585 ATDSPTTVRLYLQIERGFNCPTRTCLGRWFDAIAGLAGICP-TLHHEGEAAMTLEAL--W 641 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVN-QRAWAFHDALAQGFAALMREQATMR 687 C + L+L ++ + PV R+W H LA A +R Sbjct: 642 CTATSRADGWHIDGPNLNLLPLARRLAALRDPVEIARSW--HATLATALADWLRHAMCTT 699 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIA 738 I T + RLA A L + SLP GD LS GQ A Sbjct: 700 DIDTDRRPWWLPRESRADVRLARCPAQRALHAVRAHSLPPGDDALSYGQAWTA 752 >UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYA9_9DELT Length = 734 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 265/749 (35%), Positives = 365/749 (48%), Gaps = 55/749 (7%) Query: 20 VGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARIDSVER 76 +GFRPFV LA+ L L G V N G V V + +L + P A+I++ R Sbjct: 1 MGFRPFVAGLARGLGLRGHVENRGGEVIVAIEGSAAALDAFAARLPEEAPEAAQIEAA-R 59 Query: 77 EPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCG 135 + L F IR S G I PD C ACLAE+ P +RR+ Y CT CG Sbjct: 60 WMEVEGGLGDGFVIRASEARGEGVLAIGPDLRVCEACLAEVGDPEDRRFGYGLNACTACG 119 Query: 136 PRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP--HLEWVSH 193 PR TI P+ R + MA+FP CPAC E+ DP DRR+HA+ +ACP+CGP LE + Sbjct: 120 PRLTITARSPWARADSAMASFPACPACQGEFEDPEDRRWHAEAIACPDCGPRLRLEALDG 179 Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM 253 A E A+++A L+ G+++ +KG+GGF L DAR+ AV TLRARK RP K LAVM Sbjct: 180 RGLAGPEGAIESAAELLRRGQVLGLKGVGGFQLLVDARSEAAVETLRARKRRPHKALAVM 239 Query: 254 LPVAD--------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 VAD L A L +PA PIVL+ ++ P+ + +AP +G+MLP Sbjct: 240 --VADLRAAAELVDLTGPAAAALDSPAGPIVLLPRRG-PQAAEGVAPGQPRLGLMLPTTA 296 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR 365 LL P+V TSGN+ G+P A + ++A A L G+AD L+H+R I++R DDSVV+ Sbjct: 297 AHARLLAAFGGPIVATSGNVHGRPMARTLDEARAQLTGVADALLVHDRAILRRCDDSVVQ 356 Query: 366 ---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDL 422 LR RG P L PG + +L LG L++T A++ ++GDL Sbjct: 357 VVEGRPRALRLGRGLAPARFEL-PGSADA-SLLALGGHLQHTPAYAGEGLALVWPYVGDL 414 Query: 423 SDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-----REMNLPTQTVLHHH 477 + ++ E L + P VV DAHP Y +++WA R+ +L V HHH Sbjct: 415 DEAETRVAMGEGLADLCATIGRAPTRVVCDAHPDYATTRWAEAAQRRDPSLRVDRVWHHH 474 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN---YRECEHLGGLPAV 534 AH AA LAEH + ++ DG G+G + + WGGE L V +R HL P Sbjct: 475 AHVAAVLAEHGR----AAALGVSWDGAGLGTDRSSWGGEFLLVEGARFRRLAHLRPFP-- 528 Query: 535 ALPGGDLAAKQPWR---NLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 LPG D AA+ R +LA P + A + + +AR R +P + Sbjct: 529 -LPGADAAARDGLRVLAGMLAAAELPAPRLGGEQDEALAR---FLSIAR---RPRLSPSS 581 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW 651 S+ GR FDA AA +G + A A AA +P +LD Sbjct: 582 SAVGRLFDAFAALVGLRRRSRYQAEAACALEHAAAAHGPAPAYPFGFD--GARLDWRPAL 639 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 ++ +A A H L A++ T+ SGG N LL A + Sbjct: 640 VGAIDERARPGLVAARVHATLISMILAVVARHRP----RTVALSGGCFANALLLAGASEA 695 Query: 712 L--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 L +L P+ LP GDGGL+LGQ +A Sbjct: 696 LRGGGVEVLSPERLPPGDGGLALGQAWVA 724 >UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJD2_EGGLE Length = 920 Score = 307 bits (787), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 237/740 (32%), Positives = 327/740 (44%), Gaps = 135/740 (18%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQH 64 + ++++G VQGVGFRPFV++LA++ + G V N DGV + + + F+++L ++ Sbjct: 4 ALDIQVKGIVQGVGFRPFVYRLAKKYLIDGWVLNATDGVFIHAEGETKLLDEFVIELSEN 63 Query: 65 CPPLARIDSVEREPFIWSQLPTE----FTIRQSTGGTM--NTQIVPDAAT---------- 108 P +R++ V ++P E F IR S G + T + PD AT Sbjct: 64 PPAASRVEEV-----TLKEVPLEDFDSFEIRFSDAGAVEKTTLVSPDLATCDDCARELFN 118 Query: 109 ----------------------------------------CPACLAEMNTPGERRYRYPF 128 C C E P +RR+ Sbjct: 119 PNDRRYRYPFINCTNCGPRFTIIEKLPYDRKSTSMKDFPMCERCAREYGDPLDRRFHAQP 178 Query: 129 INCTHCGPRFT------IIRAMPYDRPFTVMAAFPLCP-------ACDKEYRDPLDRRFH 175 C CGP + + A+ V A P P A + Sbjct: 179 DACFECGPHISWREHEGMPGALAGVHAPGVSADVPAAPDVPAGASASHAAQTNVSRETLC 238 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 A GP + W + E E +A L A+ L GKI+A+KG+GGFHL CDA N A Sbjct: 239 ASDAIDAPLGP-IAWGTTRE--ESDAILARAVELLLAGKILAVKGLGGFHLVCDASNPEA 295 Query: 236 VATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LRARK R K AVM+ + + +A +LT PIVL+ K+ Sbjct: 296 VALLRARKRREGKAFAVMMADMEAVRAYCEAGEAEEGILTATQRPIVLLRKRPDAVFAPG 355 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQ----CP-------------------LVMTSGNLS 326 +A L E+GVMLP PLQHLLL + C LVMTSGN+ Sbjct: 356 LADALPELGVMLPYTPLQHLLLHDFAKASGCAERSSQREAEGSRAATAVPMLVMTSGNIH 415 Query: 327 GKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR--------ESGEMLRRSRGYV 378 +P I +E A L +AD FL H+R I R DDSVVR E+ + +RR+RGY Sbjct: 416 DEPIVIDDEDAYEKLFAVADAFLGHDRAIRARYDDSVVRVIEAGSAGEAVQFIRRARGYA 475 Query: 379 PDALALPPGFKNVPPV-------------LCLGADLKNTFCLVRGEQAVLSQHLGDLSDD 425 P LA+P + V G + KNTF L R +A +SQH+GDL + Sbjct: 476 PLPLAMPAKAREGEDVSRETSVREQGCSIFATGPEQKNTFALTRDAEAFVSQHIGDLENA 535 Query: 426 GIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLA 485 W +A + +++ P + D HP Y++S+WA E +LP V HHHAH + +A Sbjct: 536 ETYDAWLQAKDRYETLFEIEPDRIACDLHPEYLTSKWAHEQSLPVTEVQHHHAHVVSVMA 595 Query: 486 EHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQ 545 EH G V + DG G G +GA+WGGE L N E V +PGG A K Sbjct: 596 EHGL---AGPVCGIAFDGTGYGMDGAIWGGEVLLTNLTAFERFANFAYVPMPGGAAAVKH 652 Query: 546 PWRNLLAQCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 P R F + + + + +V + I+RGIN P+ SS GR FDA +A Sbjct: 653 PLRMAYGVLWAFDLLDHPGAAAALEALGEQAAVCDQMIDRGINTPMTSSVGRLFDAASAL 712 Query: 605 LGCAPATLSYEGEAACALEA 624 LG A +YEGE A LEA Sbjct: 713 LGIC-AEPAYEGEPAILLEA 731 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 660 PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL-----AD 714 PV A FHDA Q ++ GITTL SGGV NR L L H L A Sbjct: 827 PVGIIARCFHDAFVQAIVTAAELVRSLYGITTLALSGGVFMNRYL---LEHALAALEQAG 883 Query: 715 FTLLFPQSLPAGDGGLSLGQGVIA 738 FT+ + LP DG +S GQ V+A Sbjct: 884 FTVAVNRDLPPNDGCISFGQAVVA 907 >UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9X9_9ACTN Length = 1042 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 190/440 (43%), Positives = 235/440 (53%), Gaps = 64/440 (14%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCP 66 ++ I G VQGVG RPFV++ A + + G V N GDGV + + E F+ L P Sbjct: 5 RIHITGIVQGVGMRPFVYRQATEHGVTGWVLNAGDGVHIEAHAEGGALEAFVHSLRDQAP 64 Query: 67 PLARIDSVE-------REPFIWSQLPT---------------------EFTIRQSTGGTM 98 A++D+V+ EP + T F I S T Sbjct: 65 AAAQVDTVDVAFFDKAEEPIVEPDASTLEPAADVRPGAEAVHPLQAEPRFRIIASQDETE 124 Query: 99 NTQIV-PDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFP 157 ++ +V PD ATC CL E+ P +RRY YPFINCT+CGPRFTIIR +PYDR T M AFP Sbjct: 125 HSTLVSPDIATCDDCLRELFDPSDRRYHYPFINCTNCGPRFTIIRGLPYDRAQTSMGAFP 184 Query: 158 LCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA-------EQEAALQAAIAQL 210 +CPAC EY DPLDRRFHAQP AC CGPH+ W G E A+ A A+L Sbjct: 185 MCPACASEYADPLDRRFHAQPDACFACGPHITWQERGGREALVGATRETSDAIIARCAEL 244 Query: 211 KMGK-IVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDA 263 IVAIKG+GGFHLAC A + AV LRARK R KPLA+M D + Sbjct: 245 IASDGIVAIKGLGGFHLACRADSERAVRELRARKRRSNKPLAIMARDLDAAGALCHVGPK 304 Query: 264 ARQLLTTPAAPIVLVDKK---------YVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 R LL PIVL+ ++ L +A DL E+G+MLP PLQHLL+ E Sbjct: 305 ERDLLYGSIKPIVLLQRRGSMSGENPPSSSGLASSVAFDLPELGIMLPYTPLQHLLMAEC 364 Query: 315 QC----PLVMTSGNLSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVRESG 368 + LVMTSGNLS +P + N A A L GIAD L ++R I+ R DDSVVR Sbjct: 365 RVRGIDALVMTSGNLSEEPIEMDNGAAWARLVESGIADALLGNDRAILSRFDDSVVRAVN 424 Query: 369 ---EMLRRSRGYVPDALALP 385 + +RR+RGY P LALP Sbjct: 425 GQVQFVRRARGYAPRPLALP 444 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 63/126 (50%), Gaps = 12/126 (9%) Query: 394 VLCLGADLKNTFCLVR-----GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQY 448 VL G + K T L R G Q +SQH+GDL + W+ A M+ ++D P Sbjct: 523 VLACGPEQKATLALTREDGTGGAQCFISQHIGDLENAETFDAWQSARARMEGLFDLRPSA 582 Query: 449 VVHDAHPGYVSSQWARE----MNLPTQTVLHHHAHAAACLAEHQWPLD---GGDVIALTL 501 + D HPGY+SSQWARE LP V HHHAH AA +AE + VI + Sbjct: 583 LTCDVHPGYLSSQWAREQARATGLPLVQVQHHHAHIAAVIAEAAARGEIEANARVIGIAF 642 Query: 502 DGIGMG 507 DG G G Sbjct: 643 DGTGAG 648 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 9/123 (7%) Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 +G +WGGE L + + L LPGG + + P RN A + + ++ A Sbjct: 724 DGTIWGGEVLLASLSSFDRAAHLEPWPLPGGAASVRDPRRNAFALLKHY--DLLDHPGAA 781 Query: 569 ----SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG-CAPATLSYEGEAACALE 623 ++Q + +R IERGIN PL SS GR DAV+A LG C AT YEGE A LE Sbjct: 782 PLLDTLQPDEKELASRMIERGINCPLTSSMGRLLDAVSAILGICHSAT--YEGEPAILLE 839 Query: 624 ALA 626 A A Sbjct: 840 AAA 842 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 662 NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLF 719 Q AW H A+ + A E + G+ T SGGV NRLL ++ L A T+L Sbjct: 956 EQLAWDTHRAIVEITARTAVEISNSTGVRTAALSGGVFMNRLLLEGISVELERAGLTVLT 1015 Query: 720 PQSLPAGDGGLSLGQGVIAAA 740 P+ LP DGG++ GQ +A A Sbjct: 1016 PRDLPCNDGGIAYGQAAVARA 1036 >UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV7_9DELT Length = 861 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 177/380 (46%), Positives = 217/380 (57%), Gaps = 27/380 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE----TFLVQLYQHC 65 L + G VQGVGFRPFV++LA+Q L G VCN GVE+ L E P FL L + Sbjct: 6 SLALGGLVQGVGFRPFVYRLARQHALAGRVCNSAAGVEIEL-EGPRPRLVAFLDDLQRQA 64 Query: 66 PPLARIDSVERE--PFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGER 122 PP A I+ +ER P + Q F I + GG +VPD A C CLAEM P +R Sbjct: 65 PPAAVIEHLERRELPPVGEQ---GFVIADTQCGGPPVAGVVPDLAVCADCLAEMLDPADR 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFINCT+CGPR+TII +PYDRP T M F +C C EY DP RRFHAQP ACP Sbjct: 122 RYLYPFINCTNCGPRYTIIEKIPYDRPHTTMRVFTMCRRCQAEYDDPASRRFHAQPNACP 181 Query: 183 ECGPHLEWVSHGEHAEQE-----AALQAAIAQ----LKMGKIVAIKGIGGFHLACDARNS 233 +CGP L VS + + + AA +A+A+ L G+IVAIKGIGGFHLA + + Sbjct: 182 DCGPALALVSLNQQRQDKAPPPLAAGPSAVAETRRRLLAGEIVAIKGIGGFHLAVNGADQ 241 Query: 234 NAVATLRARKHRPAKPLAVM---LPVADGLPDAA---RQLLTTPAAPIVLVDKKYVPELC 287 AV LR RK RP KPLA+M L A GL LL +PA PIVL ++ Sbjct: 242 AAVKRLRRRKGRPDKPLALMVRDLATARGLVQLGPMEENLLVSPARPIVLALRQAAALPV 301 Query: 288 DDIAPDLN-EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 N +G+ML PL HLLL LVMTS N S +P I N++A L IAD Sbjct: 302 AAAVAPGNRRLGLMLAYAPLHHLLLDSELPLLVMTSANPSSEPLCIDNDEACRRLSSIAD 361 Query: 347 GFLIHNRDIVQRMDDSVVRE 366 L+H+R IV+ DDSV+ + Sbjct: 362 AVLLHDRAIVRGNDDSVIMQ 381 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 149/397 (37%), Positives = 200/397 (50%), Gaps = 35/397 (8%) Query: 370 MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQM 429 ++RR RGY P L P VL +G +LKNT CL +AV+SQHLGDL + Sbjct: 462 VIRRGRGYAPGLL---PFSHRGAAVLAVGGELKNTVCLAADGRAVISQHLGDLQNLESYR 518 Query: 430 QWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLHHHAHAAACLA 485 + + + + ++ PQ V +D HP Y++S+WAR E LP V HHHAH AACLA Sbjct: 519 VFGQTIADLSQLFAIQPQVVAYDLHPDYLASRWARQWAAEQGLPAVAVQHHHAHLAACLA 578 Query: 486 EHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQ 545 E++ G + L LDG G G +G++WGGE L + G L + LPGGDLA +Q Sbjct: 579 ENE---HQGPALGLILDGTGYGPDGSIWGGEILLGDAGGFSRWGHLETMPLPGGDLAVRQ 635 Query: 546 PWRNLLAQCLRF----VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAV 601 PWR L + +P +E + + +W L + + IN P SSCGR FDAV Sbjct: 636 PWRAALGFLYQAFAGDIPPLPFLAELQAADKVDWQALLPPLRQNINCPRTSSCGRLFDAV 695 Query: 602 AA-ALGCAPATLSYEGEAACALEALAASCHG-----------VT----HPVTMPRVDNQL 645 AA A GC +SYE +AA L A G VT H P V QL Sbjct: 696 AAMAGGC--QKISYEAQAAVELMQAADGLQGPPFAYRLIENKVTEYGFHGAGGPGVLMQL 753 Query: 646 D-LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 L ++ A + + + FH L F A + AT GI T+ +GGV+ N +L Sbjct: 754 SPLVCEVAAAVSAGAGLTEISRRFHATLVDMFTAALVTAATATGIKTVALAGGVMQNEVL 813 Query: 705 RARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAA 739 A L LA L + P+ LP+ DGGL+ GQ V+AA Sbjct: 814 LAGLKDSLAQAGLAAMLPRRLPSNDGGLAYGQAVVAA 850 >UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK99_THEYD Length = 830 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 145/312 (46%), Positives = 188/312 (60%), Gaps = 10/312 (3%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR-EDPETFLVQLYQHCPP 67 + + I+G VQGVGFRPFV+ LAQ LNL G V N GV + + E E F+ +L + PP Sbjct: 4 LHIEIKGVVQGVGFRPFVYNLAQHLNLKGFVTNTSKGVTIEIEGERVEEFISKLQNNPPP 63 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LA+I S+++ + T F I +S T T + D + C CL E+ TP +RRY YP Sbjct: 64 LAKIYSIKKTELSPNNYKT-FEIIESIDETGFTHVSEDVSICEDCLRELFTPTDRRYLYP 122 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPR+TI +PYDRP T MA F +CP C EY+DP +RRFHAQP ACP CGP Sbjct: 123 FINCTNCGPRYTITMKVPYDRPNTTMAVFKMCPECLSEYKDPSNRRFHAQPNACPVCGPQ 182 Query: 188 LE-WVSHGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + +V G E E + AI +K GKI+AI+G+GGFHL CDARN AV LR RK R Sbjct: 183 VRLFVKEGSALNEIENPIPEAIRVIKEGKILAIRGLGGFHLCCDARNEEAVKELRKRKKR 242 Query: 246 PAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 KP A+M P + + D R++L + PIVL+ KK L + +A +G Sbjct: 243 SNKPFALMSPSVEAIEKFCFVSDEERKILISLMRPIVLLRKKPQCNLPEALALKNAYLGF 302 Query: 300 MLPANPLQHLLL 311 MLP PL +LL Sbjct: 303 MLPYTPLHYLLF 314 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 145/465 (31%), Positives = 227/465 (48%), Gaps = 55/465 (11%) Query: 318 LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE-SGEM--LRRS 374 LVMTSGN+S +P NE+AL L +AD FLIHNR+I R+DDSVVRE G++ +RR+ Sbjct: 377 LVMTSGNISEEPIITKNEEALEKLNNVADAFLIHNREIFMRVDDSVVRELEGKIYFIRRT 436 Query: 375 RGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREA 434 RG+VP A+ L + +P V+ GADLKNTF L++ + A++SQH+GD+ + + E Sbjct: 437 RGFVPKAIPLT---EELPEVMGAGADLKNTFTLIKSDYAIMSQHIGDMENLETIEFYEEV 493 Query: 435 LRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWP 490 L ++++Y P V HD HP Y S+ WA+E +P + HH+ H A+ +AE+ Sbjct: 494 LNNLKSVYRTEPSAVGHDLHPMYFSTSWAKEYAEKKCIPAFALQHHYCHIASLMAEYGL- 552 Query: 491 LDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNL 550 ++ + DG G G +G +WG E L ++ + L L ++LPGG+ A K+ R Sbjct: 553 ---NELFGIAFDGTGYGTDGTIWGSEFLYCTVKDFQRLAYLKPISLPGGENAIKECSRIA 609 Query: 551 LA----------QCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 L+ ++ +P ++ SE Q L + +PL+S GR FD Sbjct: 610 LSLIDDTFGEDMDLIKKLPLYKVVSEEKIRQILKIKRLFQF------SPLSSGMGRLFDG 663 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR------------VDNQLDLA 648 V++ +G ++E EAA ALE+L + P +D + + Sbjct: 664 VSSLIGVCHYN-THEAEAAVALESLIEQGTEFSERDCYPFELVNSLEGEALVIDYKPMIR 722 Query: 649 TFWQQWLNWQA-PVNQR---------AWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + +L +A P+ +W FH+ + + L G + SGGV Sbjct: 723 EIVKDFLKSEAKPIGHSERKRGISFISWKFHNTIVKIILELTEHFRAKFGFDAVGLSGGV 782 Query: 699 IHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAAR 741 N L L + L+ ++P+ D +SLGQ I R Sbjct: 783 FQNAYLIRETIKALKKLGIKPLYHVNVPSNDACISLGQAYIVGKR 827 >UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Proteobacteria RepID=A7I1N9_CAMHC Length = 1124 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 148/432 (34%), Positives = 216/432 (50%), Gaps = 80/432 (18%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHC 65 ++ I G+VQGVGFRPF++++A + L G V NDG+GV++ D E F L+ Sbjct: 3 LKFEIAGRVQGVGFRPFIYRIATRFGLKGVVFNDGEGVKIFASADKLKIEKFKKALFAEL 62 Query: 66 PPLARIDSVEREPFIWSQLP---TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLA+I+ ++ I LP T+F I +S + T I+PD A C C E Sbjct: 63 PPLAKIEKIK----ITETLPQNFTDFKIVKSENSQIFTPILPDFAICDDCKMEFYDTKNE 118 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ YPFINCT+CGPR +II+A+PYDR T M F +C C+ EY++PL+RR+HA+P++C Sbjct: 119 RFHYPFINCTNCGPRLSIIKALPYDRKNTTMNVFKMCEKCEDEYKNPLNRRYHAEPISCR 178 Query: 183 ECGPHLEWVSHGEH---AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 +CGP L ++ + + A E ++ A L GKIVA+KG+GGFH+ DA N AV TL Sbjct: 179 KCGPEL-FLKNMQGKILASGEDGVKKATELLYAGKIVAVKGMGGFHIMADACNFEAVKTL 237 Query: 240 RARKHRPAKPLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELC------ 287 R RKHRP KP AVM + A ++L + PI+++ K Sbjct: 238 RERKHRPNKPFAVMCKDENMAKKIAFISPFESKILNSNIKPILILKMKNSQNFMQNDTNN 297 Query: 288 ----DDIAPDLNE----------------------------------------------- 296 +I P+ NE Sbjct: 298 FTENSEILPNFNENSENLKKNKNFKASSNLQQNENFKINSQDSWQIGEDYIKLAQNIAPN 357 Query: 297 ---VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 +G+ LP L LL + PL+ TS N+SG+P + + L L + D +L +NR Sbjct: 358 LDKIGIFLPNTGLHLLLFEYFSNPLIATSANISGEPIIFNEDVLLKKLFNVVDFYLDNNR 417 Query: 354 DIVQRMDDSVVR 365 +I+ DDS+ + Sbjct: 418 EILTPSDDSIAQ 429 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/380 (22%), Positives = 166/380 (43%), Gaps = 23/380 (6%) Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 ++S+ + + LR SRG P FK L LG++LKN F + + +S ++ Sbjct: 752 ENSIFNQKVQFLRTSRGLNPKIFI--SDFKCKGTFLALGSELKNQFAIYKDGLIFISPYI 809 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAH 479 GDL + ++ + L++ + Y ++ D HP ++ +++ + HH +H Sbjct: 810 GDLKNIATFDRFLKLLQIFTDTYKLKFDCIIGDLHPNFLHTKYFEKQGFKVIKFQHHFSH 869 Query: 480 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGG 539 LAE+ G + + DG G G +G +WGGE + + + +L GG Sbjct: 870 LVCALAENSLLKSGKKFLGFSFDGTGYGLDGHIWGGEVMIFDEFCFTRVTKFEEFSLIGG 929 Query: 540 DLAAKQPWRNLLAQCLRFVPEWQN---YSETASVQQQNWSVLARAIERGINAPLASSCGR 596 D A K ++ ++ +F E + ++ + +N +L + + SS GR Sbjct: 930 DNAIKNIYKIAISLIFKFGIEKKAAKFLTKFDKNEVRNLKILEKK------SIKTSSLGR 983 Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN 656 FDA A + C ++Y+GE+ LE L + + + + ++ ++Q + Sbjct: 984 IFDAFACVI-CHLDKITYDGESGMNLEKLYIQNYVKFYEFELK--NGEIKFGKVFEQIFS 1040 Query: 657 WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT 716 + V A F + +A+ + + ++ +V SGGV N+ L R++ A Sbjct: 1041 DEPCV--AATKFINGIAE-----LISKIALKYENDVVLSGGVFQNKTLMNRISKNFAKIG 1093 Query: 717 LLFPQSL--PAGDGGLSLGQ 734 F +L P D G++ GQ Sbjct: 1094 RKFYANLENPTNDSGIAYGQ 1113 >UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CGN1_9FLAO Length = 577 Score = 258 bits (658), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 199/580 (34%), Positives = 289/580 (49%), Gaps = 50/580 (8%) Query: 190 WVSHGEHAE--QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 W + G+ E + A+ I + GKI+AIKGIGG+ L CDA N A+ TLR RKHRP+ Sbjct: 4 WNNKGQKIEANTQLAIDKIIRFWEEGKIIAIKGIGGYLLTCDATNPKAIQTLRKRKHRPS 63 Query: 248 KPLAVMLPVADGLP------DAARQLLTTPAAPIVLVD--KKYVPELCDDIAPDLNEVGV 299 KP A M P + + +Q+LT API+L+ KK V DIAP LN++GV Sbjct: 64 KPFACMYPNINKIEQDCYVDSTEQQMLTGEVAPILLLQLRKKSVDIALSDIAPGLNQIGV 123 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 MLP PL LL+Q P+V TSGNLS +++ ++L GI D L ++R+IV Sbjct: 124 MLPYTPLYLLLMQAFGKPIVATSGNLSNASIVFEDKKIFSELSGIWDFALTNDREIVTPQ 183 Query: 360 DDSVVRESGE-----MLRRSRGYVPDAL--ALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 DDSV+R S ++RRSRG P+ +P K +L LGA K+ F L+ G Sbjct: 184 DDSVMRFSPFKKQPILIRRSRGVAPNYFWPDIPTEQKT---ILALGASQKSAFGLLFGGL 240 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 LSQ+LGDL+ + + N+ + P+ ++ D HP Y S+++ + + +T Sbjct: 241 FYLSQYLGDLTYLESAENLKRTIEHFVNLLNCKPEVILVDKHPDYYSTEYGKHLRDANRT 300 Query: 473 VL----HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 L HH AH A L+EH V+ + DG G G + +WGGE L ++ + L Sbjct: 301 KLVYIQHHFAHFAGVLSEHSLLQKSKRVLGIVWDGAGYGNDRNIWGGEFLVYENKKIKRL 360 Query: 529 GGLPAVALPGGDLAAKQPWRNLLA---QCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 + V L GD A +P + L+ Q +P ++ T + W + R +++ Sbjct: 361 SHIAYVPLILGDKMAGEPRLSALSHSGQNPAILPLLKDKFST-----KEWKIYQRLLDK- 414 Query: 586 INAPL-ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ 644 PL SS GR FDAVA LG T +YEGEAA LE +A + D Q Sbjct: 415 -TPPLKTSSMGRLFDAVACLLGIMD-TQTYEGEAALRLETMAQTYFDRHEDTLDSGYDTQ 472 Query: 645 LD----LATF-----WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + ++T + LN ++ A+ FH +L + ++ E A I + FS Sbjct: 473 ISYLDGISTMPIIEGVVKDLNNGTAKDEIAFKFHYSLVK----MVEEIALENTIEKIAFS 528 Query: 696 GGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQ 734 GGV N LL L +L + F L F Q + D G++LGQ Sbjct: 529 GGVFQNGLLVDLLMMHLENRFQLYFHQQVSPNDEGIALGQ 568 >UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZV5_9PROT Length = 391 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 139/389 (35%), Positives = 197/389 (50%), Gaps = 28/389 (7%) Query: 381 ALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQN 440 ++ALP GF+ L LG +LK++ CL+R A LS +GDL + I +R L ++ Sbjct: 8 SVALPAGFEAAAETLALGGELKSSICLIRHGTAGLSVAIGDLEQEDI---YRHFLASAES 64 Query: 441 IYDF-TPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGD 495 + + + D HP Y+S+++ A E++LP Q V HHHAH AA +A++ PLD Sbjct: 65 VLTACKAEQIAIDRHPDYLSTKYGQQLADELSLPLQQVQHHHAHIAAVMADNNLPLDCKS 124 Query: 496 VIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL 555 V+ + LDG+G GE+G +WGGE L +YR + +G VA+PGG A +PWRN LA L Sbjct: 125 VLGIALDGLGFGEDGTIWGGEFLLADYRGFQRVGRFQPVAMPGGAAAIHEPWRNTLAHLL 184 Query: 556 RFVPEWQNYSETAS-------VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCA 608 P W S T S + + +++ + G+NAPLASSCGR FDAVAAA+G Sbjct: 185 ---PLWDTVSTTFSDTDIIRFLNNKPVAMMHSMLASGLNAPLASSCGRLFDAVAAAVGLY 241 Query: 609 PATLSYEGEAACALEALAASCHG-VTHPVTMPRVDNQLDLATFWQ-QWLNWQAPVNQR-- 664 + E +AA ALE A++C T D L W+ WL + Sbjct: 242 RDRVDCEAQAAIALEQAASTCFDRETARYNYQTSDENGCLQLNWRPMWLELLGDIQNGTD 301 Query: 665 ----AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--FTLL 718 A FH + + T+ SGGV NRL+ L L ++L Sbjct: 302 TGVIAARFHRTIIDALHVTAVSLCRTHRVDTIALSGGVFQNRLISTHLPQALQQDGLSVL 361 Query: 719 FPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +PA DGG+ LGQ V+AAA L +V Sbjct: 362 QHHQVPAHDGGICLGQAVVAAAIRLKEKV 390 >UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGS6_9HELI Length = 490 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 50/409 (12%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---------REDPE 55 T + + G +QGVGFRPFV LA L+LHG V N + L RE Sbjct: 35 TQYSIHAEVFGMIQGVGFRPFVATLAHVLHLHGFVYNQSGSTLIALHISTQKECKRESIL 94 Query: 56 TFLVQLYQHC-----PPLARIDSVEREPFIWSQLPT---------EFTIRQSTGGTMNTQ 101 F L C P + +++ I T TI T T Sbjct: 95 LFYTALLLACKYTINPGTQDLSIIQKASSILEHTHTPKQAYITSLHITIHTDTAHTQGFH 154 Query: 102 IVP--------------DAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYD 147 I+ D C +CL +M R Y YPF+ C +CG R++I+ +PYD Sbjct: 155 ILESNVTQHAIQAHIPLDTKVCESCLKDMRDENSRFYNYPFVACVNCGARYSILHQLPYD 214 Query: 148 RPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQE--AALQA 205 R T M+ LC CDK+Y++ ++RRFH +P++C C +E+ + H + A++ Sbjct: 215 RKNTSMSDMALCIDCDKDYKNLVNRRFHTEPLSCNNCAIKVEFYRYNHHEKHYDLDAIKT 274 Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM-----LPVADGL 260 L IV KG+GGF +AR+ A+ +R+ K+R KP VM L L Sbjct: 275 LAKALMQNNIVLFKGLGGFAYIANARSKEALQKIRSIKNRLHKPFVVMANIPTLRTISLL 334 Query: 261 PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQ--CPL 318 LLT+ APIV+V K L ++++ L +GV++P + LL L + Sbjct: 335 TPQLESLLTSKEAPIVIVPKHPQYNLSNEVSS-LQTIGVVIPYTAMLTLLFSYLSPDFAM 393 Query: 319 VMTSGNLSGKPPAIS-NEQALADLQGIADGFLI--HNRDIVQRMDDSVV 364 + TS N G+ A + + AL + IA+ I +NR+I+ +DDS++ Sbjct: 394 IYTSANNKGEMIATTLHNLALDRIVDIAESLYILDYNREILNCVDDSIL 442 >UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H082_STRCL Length = 286 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/212 (44%), Positives = 121/212 (57%), Gaps = 27/212 (12%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++ ++G VQGVGFRPFV+ LA L L G V N GDGV + P+ F ++ P Sbjct: 15 RVAVQGLVQGVGFRPFVFALATGLGLSGHVTNTGDGVLAEVEGPPDAVDAFCRRIVSDAP 74 Query: 67 PLARIDSVEREP--------FIWSQLPTEFTIRQSTGGT----------------MNTQI 102 PLA + +V +E F + T R + GT T I Sbjct: 75 PLADVAAVRQEEIRATGARGFAIAPSSRAGTGRGTDRGTDRGGGRDPDGAGGRGAGRTLI 134 Query: 103 VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPAC 162 PD ATC ACLAE+ P +RR+R+PFI CT CGPRFTI+ A+PYDR T MA FP+C AC Sbjct: 135 PPDTATCAACLAELRNPADRRFRHPFITCTDCGPRFTIVTALPYDRAHTTMAGFPMCRAC 194 Query: 163 DKEYRDPLDRRFHAQPVACPECGPHLEWVSHG 194 +EY DP DRRFHAQPV+C +CGP L ++ G Sbjct: 195 AREYADPADRRFHAQPVSCHDCGPRLTLIAPG 226 >UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Burkholderiales RepID=HYPF1_RALEH Length = 394 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 126/373 (33%), Positives = 177/373 (47%), Gaps = 22/373 (5%) Query: 384 LPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD 443 LP G + P VL GA LKN CL+RG + + S GDL D +++ + + Sbjct: 6 LPAGSDHAP-VLACGAWLKNAACLLRGAEVLWSPIHGDLGDPANCDALDQSVEQLLDSAH 64 Query: 444 FTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 Q V HD HP + S+Q A+ + +P V HHHAH AA +AE+ VI L Sbjct: 65 GQVQAVAHDLHPDFYSTQLAQRLAARLCVPAVAVQHHHAHIAALMAEYDLR---EPVIGL 121 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 LDG+G+G +G WGGE L V+ E LG L ++ LPGGD+AA++PWR + A L + Sbjct: 122 ALDGVGLGTDGTAWGGELLWVSPSEWCRLGHLQSLPLPGGDVAAREPWR-MAAAALHVLD 180 Query: 560 EWQNYSET--ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGE 617 A V +Q +A +ER +N P +SS GR+FDA A ALG + + Sbjct: 181 RTGEIGRRYGAVVGEQAARTVAAMLERQLNCPRSSSAGRWFDAAAGALGVSVRQQAEAQA 240 Query: 618 AACALEALAASCHGVTHPVTMPRV----DNQLDLATFWQQWLNW-----QAPVNQRAWAF 668 A A ++ P + D LDL +Q + A F Sbjct: 241 AIALEALAADYLSALSPPECVGTYVVDQDGVLDLRGLLEQLFALADEGQAGQAARGAALF 300 Query: 669 HDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAG 726 H ALA+ + A G+ T+ GG N +L A + LA L L P+++ G Sbjct: 301 HVALAEALVGWAADAAQGHGLKTVALGGGCFMNGILSASVQAGLAARGLQALLPRAVSCG 360 Query: 727 DGGLSLGQGVIAA 739 D GL+LGQ +AA Sbjct: 361 DAGLALGQAWVAA 373 >UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum RepID=Q97TF8_CLOAB Length = 477 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 14/207 (6%) Query: 158 LCPACDK-EYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKI 215 LC C K ++++PL+R FH + + C P L V + +A ++ A LK I Sbjct: 8 LCDRCLKNKHKNPLNRLFHIEEICLKNCIPPLTLVDNKYNAINSLNIIEKAYKLLKSANI 67 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLT 269 +AIK GGF+L C+ ++ A+ TLR RK R +KP AVM+ + + +++L Sbjct: 68 LAIKDTGGFYLICNGKSRAAINTLRRRKMRQSKPFAVMMKDIYTVREFCEVHSEEKKVLE 127 Query: 270 TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ-ELQCPLVMTSGNLSGK 328 + PIV++DKK L ++I+P+L +GVMLP +P+ L+LQ +L ++ S N+ K Sbjct: 128 SSERPIVILDKKPSLNLPNNISPNLKSIGVMLPFSPISRLMLQKDLDVLIITKSSNIELK 187 Query: 329 PPAISNEQALADLQGIADGFLIHNRDI 355 NE A +L+ IAD FLIHNR+I Sbjct: 188 -----NETAFKNLKNIADYFLIHNREI 209 >UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Magnetospirillum RepID=Q2W6T0_MAGSA Length = 358 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 130/367 (35%), Positives = 175/367 (47%), Gaps = 28/367 (7%) Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 +ALP + VPPVL +GA LKN C+ RG +A++S + GDL + + + Sbjct: 9 VALP---RAVPPVLAVGAFLKNAVCVTRGAEALISANHGDLGTPEAIAAFEACVEALVAE 65 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 TP V HD HP + +++A+ ++LP V HHHAHAAA AEH G VI ++ Sbjct: 66 AGVTPVRVAHDLHPDFHCTRYAQSLDLPQVPVQHHHAHAAAIAAEHGIE---GPVIGVSF 122 Query: 502 DGIGMGENGALWGGECL---RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV 558 DG G+G WGGE L +YR HL LP PGGD AA++PWR + A L + Sbjct: 123 DGFGLGPGNQSWGGELLLAEGAHYRRLGHLALLPQ---PGGDRAAREPWR-MAASVLHKL 178 Query: 559 PEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEA 618 +E ++L + ++R +N+P SS GR FDA LG P +E +A Sbjct: 179 GRGPEIAERFK-DIPAAAMLGQMLDRRLNSPETSSAGRLFDAACGLLGLHPIA-EFESQA 236 Query: 619 ACALEALAASCHGVTHPVTMPR----VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQ 674 ALEAL VT P +P D LDL + PV + A FH L Sbjct: 237 PMALEAL------VTAPEVLPTGWILQDGVLDLLPLLACLAHCTDPV-RGANLFHGTLIA 289 Query: 675 GFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSL 732 A + + A G + GG N++L L L L L + GD GLSL Sbjct: 290 AMAKWIGDVAATAGTPYVTLGGGCFLNKVLTGGLVDRLTALGLRPLTAAKVSPGDAGLSL 349 Query: 733 GQGVIAA 739 GQ IAA Sbjct: 350 GQAWIAA 356 >UniRef50_C0AQL5 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AQL5_9ENTR Length = 158 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 7/149 (4%) Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT-------MPRVDNQLDLAT 649 FFDAV+A+LG AP +S+EGEAAC L+ A +CH MP ++ LDL Sbjct: 4 FFDAVSASLGLAPKEISWEGEAACYLQTAALACHKEKQSEIIERYGHLMPVKNSVLDLGV 63 Query: 650 FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 FW QW + + V+++AW FH LA+ + + A I T+V +GGV++N LL+ Sbjct: 64 FWSQWESIKLNVSEKAWLFHYLLAESLGNIALQYADEHQIDTVVLTGGVLNNTLLKHMFK 123 Query: 710 HYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 L + +L P LP GDGG++LGQ +IA Sbjct: 124 KKLNNKKVLTPMMLPVGDGGIALGQALIA 152 >UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thauera sp. MZ1T RepID=C4KD95_THASP Length = 447 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 99/268 (36%), Positives = 130/268 (48%), Gaps = 17/268 (6%) Query: 381 ALALPP----GFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALR 436 AL LP G P+L LGA K+ CL+ +A +LGDL D+ + E Sbjct: 29 ALGLPSVGAGGLPEALPILALGAWFKHAACLLEDGRAQFGPNLGDL-DNADACRAVEPAA 87 Query: 437 LMQNIYDFTP-QYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAACLAEHQWPL 491 L TP + + HD HP + S++ A + +P V HHHAH A LAEH Sbjct: 88 LALLARAATPVRAIAHDLHPDFHSTRVACALAARLGVPAIGVQHHHAHVGAVLAEHGR-F 146 Query: 492 DGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLL 551 D V+ L LDG+G+G +G WGGE L V E LG L + LPGGD AA++PWR + Sbjct: 147 DARPVLGLALDGVGLGTDGEAWGGELLWVAGGEFVRLGHLRPLRLPGGDRAAREPWR--M 204 Query: 552 AQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPAT 611 A L + Q ++LA+ + R +P +SS GR FDA A LG Sbjct: 205 AAALLHASGRGDEIARRFPGQPAAALLAQVLARPALSPPSSSLGRHFDAAAGLLGLC-EV 263 Query: 612 LSYEGEAACALEALAASCHGVTHPVTMP 639 + E EAA ALE LA+ G P P Sbjct: 264 MHNEAEAAIALERLAS---GTAAPEVTP 288 >UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHI7_9HELI Length = 542 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/381 (26%), Positives = 160/381 (41%), Gaps = 67/381 (17%) Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 GA K++ ++S ++GDL +R+ Y TPQ ++ D H Sbjct: 178 FGAMQKSSIAFGFHNHIIVSPYMGDLFTPYNVANFRKTYDYFSTNYG-TPQALIADIHNQ 236 Query: 457 YVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 Y+S+Q A+E+ +P V HHHAH A L E + GG + + DG GMG++G L Sbjct: 237 YISTQIAKEIAKDSKIPLFQVAHHHAHFNALLLES--SMKGG--VGVIFDGSGMGDDGTL 292 Query: 513 WGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWR--------NLLAQCLRFVPEWQNY 564 WGGE L + ++ E + + GG+ K R N +A F+ + Sbjct: 293 WGGEFLCGDSKQVERILHFKPFRILGGEKHIKDCKRLAYSYAICNDIAPLKAFIESSYDE 352 Query: 565 SETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA 624 +E ++Q + + G N+PL SS GR FD LG LSYE ++ E Sbjct: 353 NERKALQALH--------DTGFNSPLCSSVGRLFDIAGFILGL--ERLSYEAQSG---EL 399 Query: 625 LAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDA-----LAQGFAAL 679 +A++ + + + + + ++ T Q + N P N + FH +++ + Sbjct: 400 IASNTLKLAYDI-LTHKNQTINYNTLMQTFSNM--PYN--PYPFHITQNMIDMSECIEMM 454 Query: 680 MREQAT--------MRGITTL----------------VFSGGVIHNRLLRARLAHYLADF 715 ++Q T R I TL F GGV N L R+ L Sbjct: 455 FKDQQTSKNSDMIAARFIDTLAYCILESLKRIGTDYAFFGGGVFANYALCIRVKKLLHTH 514 Query: 716 TL--LFPQSLPAGDGGLSLGQ 734 + FP+ LP D +S+GQ Sbjct: 515 NIKAFFPK-LPCSDYSISIGQ 534 >UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina EX-H1 RepID=C0QPN6_PERMH Length = 709 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 22/279 (7%) Query: 99 NTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFP 157 + I+P + + C CL E P +RR+ YPFI+C +CG ++ + P++R TV F Sbjct: 93 DLNIIPLNRSVCINCLEESLNPTDRRFFYPFISCNYCGSQYAFLFEYPFEREKTVFKFFH 152 Query: 158 LCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH------AEQEAALQAAIAQLK 211 C C KEY + R+ + ++CP+C + + S + E+E A + Sbjct: 153 PCENCKKEYENSSSFRYRYELISCPDCFAPVFYRSKSKERIAFTPEEREKLFNAIAGLVS 212 Query: 212 MGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAAR------ 265 GK V +K G+ + N + +R + KP+ V++ L D A Sbjct: 213 EGKPVKVKTANGYKVIGTIHEEN-IKKIREIEKTGRKPVTVLITDISKLDDIAYVNDTQI 271 Query: 266 QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL---LQELQCPLV--- 319 + L++ P+V + K L D+ V L +P+ + L+E P + Sbjct: 272 KALSSQERPVVKLQAKDAF-LERDLVSQTGFVNFKLVDDPVLSFIAFFLKERGIPYIFIH 330 Query: 320 -MTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 ++ NL + ++ + ++Q + F + +R +++ Sbjct: 331 DISEDNLDKINDGLDHDVPIVNIQKDTEVFTVGDRILIK 369 >UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUF6_SULAA Length = 658 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 15/213 (7%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRL--REDP-ETFLVQLYQHCPPLARIDSVEREP 78 F P + ++ ++ + G V +G+++ + ED +TF+ L P + E Sbjct: 19 FLPLIKRIGEKEGIKGYVERTLEGIKIVISSNEDKVKTFMEVLGSKLPVSFFMSDASVEI 78 Query: 79 FIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCGPR 137 +F I+ T I+P + CP+C E+ P +RY YPFI+C+ CG + Sbjct: 79 SEEEITNEDFFIKNET-----LNILPVNYGLCPSCTQELLNPNSKRYLYPFISCSFCGFQ 133 Query: 138 FTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA 197 ++ + P+DR T+ F +C C +EY R+ +C EC + + E Sbjct: 134 YSYLFYYPFDRKNTIFKYFQMCDNCQQEYDSKFSFRYKYPLTSCYECFIPVSFYEDNEEV 193 Query: 198 -----EQEAALQAAIAQ-LKMGKIVAIKGIGGF 224 + + +A+ ++ GK + +K + G+ Sbjct: 194 LSLNPQSNLNILLKVAEYIENGKDILLKTLNGY 226 >UniRef50_C4V235 Putative uncharacterized protein (Fragment) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V235_9FIRM Length = 211 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 9/176 (5%) Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH--G 631 W +L +A G++APL SS GR FDA AA LG A +YEG+A LE LA + G Sbjct: 30 GWELLMQATAAGLSAPLTSSAGRLFDAAAALLGVAYRN-AYEGQAPIELERLARTARRAG 88 Query: 632 VTHPVTM---PRVDNQLDLATFWQQWLNWQAPVNQ---RAWAFHDALAQGFAALMREQAT 685 P T+ R+ + A + V + RA FH +A A ++ + Sbjct: 89 RVLPYTVAEGARLTVDVLPALYALADGAEALTVEERAGRALDFHVTMAAAVAEVLGILSV 148 Query: 686 MRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 G+ T+ +GGV N LL L + + +L P +P DGG++ GQ +A AR Sbjct: 149 RTGLRTVALAGGVFQNALLLEELLPRIGGYHVLLPHRVPPNDGGIAYGQAAVALAR 204 >UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNN4_9SYNE Length = 295 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 29/250 (11%) Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH+AH +C+A+HQ V+ + DG G G+N LWGGE L+ ++ G V Sbjct: 43 HHYAHILSCMAKHQLK---APVLGVAWDGNGAGKNSTLWGGEFLQPTQDGTQY--GFERV 97 Query: 535 A------LPGGDLAAKQPWRN---LLAQCL-RFVPEWQNYSETASVQQQNWSVLARAIER 584 A LPGG+ + +P R+ LL C E + + + + L + + + Sbjct: 98 AHFLPYYLPGGESCSLEPRRSALGLLYGCYGEAAFEMTDLAPIQFFTKSQLTTLQKTLTQ 157 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE-ALAASCHGVTHPVTMP-RVD 642 +N SS GR FD VA+ L + +EG+AA LE A S +P T+ Sbjct: 158 KVNVSATSSVGRMFDGVASLLNLH-HYVGFEGQAALTLEFAATQSSTRSVYPFTVTDTYP 216 Query: 643 NQLDLATFWQQWLN-----WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 N +D +Q + PV A FH+ L + ++ E + + +V +G Sbjct: 217 NIIDWRETFQSIVEDCRNAVMTPV--IAAKFHNTLVE----IVVEISHRTNNSQIVLAGS 270 Query: 698 VIHNRLLRAR 707 N++L R Sbjct: 271 CFQNKILIER 280 >UniRef50_A6Q3L8 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3L8_NITSB Length = 337 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 11/134 (8%) Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I A CP C+ EM P RR+ YPF +C CG + + P++RP T++ F C Sbjct: 80 TYIPSSIALCPNCIKEMLDPESRRFYYPFTSCNSCGYQSGFLFHYPFERPNTLLNFFKPC 139 Query: 160 PACDKEYR-DPLDRRFHAQPVACPECGPHLEWVSH--------GEHAEQEAALQAAIAQL 210 C +E + +P R + + C EC L+ E E + A L Sbjct: 140 NECQEELKTNPF--RENYPLITCTECNIPLKLSDKKGSKVLFANEKEEYKQIFDIAANAL 197 Query: 211 KMGKIVAIKGIGGF 224 K GK V IK G+ Sbjct: 198 KDGKRVRIKTFRGY 211 >UniRef50_A6QAV0 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAV0_SULNB Length = 641 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 9/127 (7%) Query: 105 DAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDK 164 + + CP+C EM RRY YPF +C C + + A PY R + M C AC + Sbjct: 93 NISLCPSCQKEMFDVSSRRYYYPFTSCNSCASQHPFMTAYPYKRANSTMKFLVPCDACHQ 152 Query: 165 EYR-DPLDRRFHAQPVACPECGPHLEWVS------HGEHAEQEAALQAAIAQLKMGKIVA 217 E + +PL + + ++C +CG L+ + + + A +K GK V Sbjct: 153 EMKNNPLRKDYPL--ISCVDCGISLKMNDGKSERYANDKGSYRKLFEVSAAAIKKGKSVL 210 Query: 218 IKGIGGF 224 +K G+ Sbjct: 211 MKTANGY 217 >UniRef50_Q8TXM7 Translation factor (SUA5) n=1 Tax=Methanopyrus kandleri RepID=Q8TXM7_METKA Length = 212 Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 8/152 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV---- 252 E A++ + L+ GK+VAI + L+CDA NS AV L A K RP KP++V Sbjct: 8 EDPHAVKHVVRALRAGKLVAIPCDTVYSLSCDATNSEAVRRLYAAKERPKDKPVSVAVHS 67 Query: 253 ---MLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 L + + +P L T P+ +V + + ++A +GV +P +P Sbjct: 68 PEKALELLEPVPRLEAALETLTPGPVTIVAPRRPGVVAPEVAAGRRTLGVRIPDHPFFLR 127 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 +++ P+V TS N+SG+P ++ L Sbjct: 128 VVRRFGKPIVTTSANVSGRPAPTDPDEVFEQL 159 >UniRef50_A8MC09 Acylphosphatase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=ACYP_CALMQ Length = 95 Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 6/90 (6%) Query: 8 GVQLRI--RGKVQGVGFRPFVWQLAQQLNLHGDVCN--DGDGVEVRLR--EDPETFLVQL 61 GV++R+ +G VQGVGFR F+ + A L L G V N DG+ VE+ + ED L++L Sbjct: 4 GVRVRVIVKGIVQGVGFRSFIRRHATALGLTGYVRNLPDGESVEIVVSGPEDRVNELIKL 63 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIR 91 + PP A +DSVE EP+ + T F++R Sbjct: 64 AKRGPPAAVVDSVEVEPYEGVEDFTGFSVR 93 >UniRef50_A8RF90 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RF90_9FIRM Length = 202 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 24/163 (14%) Query: 203 LQAAIAQLKMGKIVA-----IKGIGGFHLACDARNSNAVATLRARKHRPA-KP------- 249 +QA + QLK K++A + G+G + + A+A L+ K RP KP Sbjct: 11 IQAVVKQLKQKKVIAFPTDTVYGLGVIY------DEEALAALKYSKGRPENKPIPTMVGS 64 Query: 250 LAVMLPVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 LA M +A L + A++L P A +++ KK + D + + +G+ +P + Sbjct: 65 LAQMEEIAV-LNEEAKKLAAAFMPGAFTMILKKK--DSVADFVTNGMETIGIRMPQDDFV 121 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 LL+++ P+++TS NLSG+ + + Q L+ L G DG ++ Sbjct: 122 LELLRQVGSPMLVTSANLSGEATGLVDVQVLSQLDGRIDGIVL 164 >UniRef50_Q3A498 Translation factor SUA5 n=6 Tax=Deltaproteobacteria RepID=Q3A498_PELCD Length = 204 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 32/198 (16%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA---TLRARKHRPAKPLAVMLP 255 Q+ + + +K G IVA + L CD N + ++ R HR KP + + Sbjct: 11 QKRLISRVVECIKQGGIVAYPTDTIYGLGCDIFNRKGIKRIYQIKERVHR--KPFSFI-- 66 Query: 256 VADGLPDAARQLLTTPAAPIVLVDKKYVPE------LCDDIAPDL-----NEVGVMLPAN 304 AD L D A + A ++ K+Y+P + PDL VG+ +P+N Sbjct: 67 CAD-LSDVANYAQVSNFAFKIM--KRYLPGPYTFVLEATRVVPDLLVTKQKTVGIRIPSN 123 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKP----PAISNEQALADLQGIADGFLIHNR--DIVQR 358 P+ +++EL PLV TS NLSG+ P++ E+ + + DG +I ++ Sbjct: 124 PISLAIVRELGHPLVTTSANLSGEEPCCDPSLIEEELGKQINMVVDGGIIKGEASTVISL 183 Query: 359 MDDSVVRESGEMLRRSRG 376 +DD++ E+LR+ G Sbjct: 184 IDDNI-----EVLRQGAG 196 >UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacteria RepID=B0TI69_HELMI Length = 422 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 27/219 (12%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGLP 261 L+ A A L+ G +VA + L DA + AVA + K RP+ PL V + D Sbjct: 23 LREAAACLQAGGLVAFPTETVYGLGADALQAEAVAAIFTAKGRPSDNPLIVHIADRD--- 79 Query: 262 DAARQLLTTPA-----------APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 D AR + PA P+ LV P++ + L V V +P++P+ L Sbjct: 80 DVARLTVGFPALARRLAERFWPGPLTLV-LPASPQIPAVVTAGLATVAVRMPSHPVARAL 138 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 + E P+ S N SG+P + DL G DG ++ D ++ +VV +G++ Sbjct: 139 IGEAGTPVAAPSANRSGRPSPTTAAHVWEDLGGRIDG-IVDGGDCDLGLESTVVDATGDV 197 Query: 371 LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 A+ L PG + LG ++ F R Sbjct: 198 ----------AVILRPGGVTREMIEALGLPVRTAFAAER 226 >UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFV3_ARCPR Length = 289 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 34/227 (14%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD 258 E+ L+ +K GK+VA + L +A + NAV L K RP KP++V++ D Sbjct: 13 DESVLREVAHMIKEGKLVAYPTETVYGLGTNALDENAVKRLFEVKGRPKKPVSVVVSDLD 72 Query: 259 GL-----PDAARQLLTTPAAP----IVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 + P+ L P I++ KK +P + + +++G+ LP + Sbjct: 73 HVERIAEPNETALKLMEKFFPGPITIIVKKKKVIPPI---VTAGTDKIGIRLPDYKIPLK 129 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 L + P+ TS N+SGKP E + D G D L ++GE Sbjct: 130 LAEFSGVPVTSTSANVSGKPSPTKPEHIMVDFMGKIDAIL----------------DAGE 173 Query: 370 MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 + V D PP VL +GA N V GE VL Sbjct: 174 TPLKIESTVIDTTTEPPR------VLRVGALPLNEIEKVVGEVEVLD 214 >UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8F9_MACCJ Length = 334 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 16/185 (8%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLP------ 255 +Q I K G+ +AI + LA DA N AVA + K RP PL V + Sbjct: 21 VQEIITGFKAGETIAIPTETVYGLAADATNREAVAAIFKAKGRPQDNPLIVHIHHLSQLE 80 Query: 256 -VADGLPDAARQLLTT----PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + AA +L+ P + IV V + L + + LN V V +PA+ + H L Sbjct: 81 WFTHDIHAAAYKLMDYFWPGPISFIVPVKQGI---LAESVTAGLNTVAVRMPAHKVAHQL 137 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 ++ L S N SGKP E + D++G G ++ + + ++ +VV S Sbjct: 138 IEMTDLLLAAPSANTSGKPSPTKAEHVIHDMEGKIFG-IVQSEQVEVGIESTVVDCSQYP 196 Query: 371 LRRSR 375 R +R Sbjct: 197 FRIAR 201 >UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinaceae RepID=Q46E17_METBF Length = 367 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 22/165 (13%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL-RARKHRPAKPLAVML---- 254 ++ L+ A A +K G VA + L D N AV + A+K P PL++++ Sbjct: 22 DSVLERASAIIKRGGTVAFPTETVYGLGADGLNPEAVMKIFEAKKRPPGNPLSLLVHSRE 81 Query: 255 ---PVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPD-----LNEVGVMLPAN 304 VA +P++A +L+ P ++++K +DI PD L +GV +P + Sbjct: 82 DVEKVARNIPESAFRLMNAFWPGPLTIILEK-------NDIVPDITSGRLKSIGVRMPDH 134 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 + L++ PL S NLSGKP ++DL G D L Sbjct: 135 RVPLDLIKRAGTPLAAPSANLSGKPSPSLAAHVISDLTGRIDAIL 179 >UniRef50_B9JMA7 Acylphosphatase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMA7_AGRRK Length = 97 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQL--- 61 T C ++I GKVQGVG+R + A QL L G V N+ DG L T + + Sbjct: 4 TQCAFLVKITGKVQGVGYRAWTRSQALQLGLTGWVRNEPDGSVTALIAGSSTAITSMLEW 63 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTI 90 + P + + VE P I ++LP +FTI Sbjct: 64 FWSGPAGSSVSGVEPRPTILNELPGDFTI 92 >UniRef50_Q3AQA5 Translation factor SUA5 n=12 Tax=Chlorobiaceae RepID=Q3AQA5_CHLCH Length = 324 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 10/153 (6%) Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML-------PVA 257 A A L GKIVA + L +S A+ + K RP+ PL + + VA Sbjct: 20 AAALLNGGKIVAFPTETVYGLGATINHSEALKQIFVAKGRPSDNPLILHIAHPDNIGKVA 79 Query: 258 DGLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 +P A + + P+ LV K P++ + + L VGV PA+P+ LL + Sbjct: 80 ATVPRYAERFIEKFFPGPLTLVLPKQ-PQVPELVTAGLQSVGVRCPAHPMAQALLALVNS 138 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 P+ S N SGKP A S E DL G DG L Sbjct: 139 PVAAPSANRSGKPSATSWETVYDDLNGRIDGLL 171 >UniRef50_Q1MFT8 Acylphosphatase n=3 Tax=Rhizobium RepID=ACYP_RHIL3 Length = 94 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 V++RI GKVQGVGFR + A +L L G V N+ DG V + P+ + +++ ++ Sbjct: 7 AVRVRISGKVQGVGFRYWTRDEAVRLGLTGWVRNEEDGAVVAVIAGPDSAISTMIERFRR 66 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTI 90 P A + SVE E + PT+F I Sbjct: 67 GPSGASVSSVETEATQLEKNPTDFRI 92 >UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paenibacillus RepID=C6D5G7_PAESJ Length = 356 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 19/207 (9%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGL- 260 L+ A + L+ G++VA + L DARN+ AV + K RP+ PL V + + L Sbjct: 22 LEEAASLLRDGELVAFPTETVYGLGADARNTTAVEGIFKAKGRPSDNPLIVHIADENQLA 81 Query: 261 ------PDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P+ A +L+ P+ +V + + L VG+ +P +P L+++ Sbjct: 82 ELVLPYPELAGRLMKELWPGPLTIVLPVRTGAVSPLVTAGLTTVGIRMPDHPAALALIRQ 141 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL------IHNRDIVQRMDDS----V 363 CP+ S N SG+P L DL G G + + V + DS + Sbjct: 142 SGCPVAAPSANRSGRPSPTLAAHVLEDLAGKISGIVDGGATGVGLESTVIELPDSNTIRI 201 Query: 364 VRESGEMLRRSRGYVPDALALPPGFKN 390 +R G + R P+A+ P N Sbjct: 202 LRPGGITAEQLRSAAPEAVIDAPAAAN 228 >UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z824_BREBN Length = 359 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 12/150 (8%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML-------PVADGLP 261 L+ G +VA + L +A ++ AV + K RP+ PL V + VA +P Sbjct: 32 LREGAVVAFPTETVYGLGANALSNEAVEKIFTAKGRPSDNPLIVHIGAWDQLSTVASEVP 91 Query: 262 DAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLV 319 + ++L+ P V++ K ++ + L+ VGV +P +P+ L++E P+ Sbjct: 92 EKGKKLMEAFWPGPLTVILPK--TDQVASLVTAGLDSVGVRMPDHPIALALIKEAGVPIA 149 Query: 320 MTSGNLSGKPPAISNEQALADLQGIADGFL 349 S N SG+P + LADL G G + Sbjct: 150 APSANRSGRPSPTTAAHVLADLDGRVAGVV 179 >UniRef50_D0MJN8 Acylphosphatase n=2 Tax=Rhodothermus marinus RepID=D0MJN8_RHOM4 Length = 97 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQL-- 61 + ++ R+ G+VQGVGFR FV A++L L G V N+ DG + E P L QL Sbjct: 5 DAQARLEARVTGRVQGVGFRQFVRYHARRLGLTGWVRNEPDGSVYLVAEGPRELLEQLLD 64 Query: 62 -YQHCPPLARIDSVE 75 + PP AR+D V+ Sbjct: 65 AVRQGPPAARVDDVQ 79 >UniRef50_C9RL80 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL80_FIBSS Length = 331 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 20/154 (12%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV-------MLPVADGLP 261 LK G++VAI + LA +A A+A + A K RP PL V + +A +P Sbjct: 28 LKEGEVVAIPTETVYGLAGNAFEPKALAKIFAAKERPTFDPLIVHIADIAQLTDIAKDIP 87 Query: 262 DAARQLLTT----PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP 317 D+A +L P I+L K +P+LC P V V P++P+ +++E P Sbjct: 88 DSAYRLAEAYWPGPMT-IILPKKDCIPDLCTSALP---SVAVRFPSHPIAQAIIKESGLP 143 Query: 318 LVMTSGNLSGKPPAISNEQALADL----QGIADG 347 L S NL + E A L GI DG Sbjct: 144 LAAPSANLFKHVSPTTAEHVAAQLADRIAGIVDG 177 >UniRef50_D0N186 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0N186_PHYIN Length = 363 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 19/151 (12%) Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLPDAA 264 A QL++G++VA + L +A NS AV + K RP PL V +P D DA Sbjct: 15 AAQQLRLGQLVAFPTETVYGLGANALNSEAVLAIFEAKARPLTDPLIVHVPALD---DAV 71 Query: 265 RQLLTTPAA--------------PIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + + TP P+ L+ K VPEL ++ + VG+ P +P+ L Sbjct: 72 KLVDMTPTGRQAFECLGRAFWPGPLTLI-AKAVPELPLMLSANTGFVGLRCPKHPIAQAL 130 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADL 341 L+E + P+ S N G + + + DL Sbjct: 131 LKEAKVPVAAPSANRFGHVSPTTAKHVMDDL 161 >UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX04_9FIRM Length = 377 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 14/154 (9%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPL-------AV 252 AA++ A+ L+ G++VA + L + ++ A A + K RP+ PL A+ Sbjct: 14 AAIEEAVHLLRAGEVVAFPTETVYGLGANGFDAAACAKIYEAKGRPSDNPLILHIAHRAM 73 Query: 253 MLPVADGLPDAARQLLTTPA-APIVLVDKK--YVPELCDDIAPDLNEVGVMLPANPLQHL 309 + VA +P+ A LL A P+ LV ++ VP D I L VGV +P N Sbjct: 74 LDEVALDVPEMAEHLLAAFAPGPLTLVLRRCAAVP---DRITGGLATVGVRMPENDAALA 130 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 L++ PL S N SG+P + E L DL G Sbjct: 131 LIRAAGFPLAAPSANTSGRPSPTTAETVLEDLAG 164 >UniRef50_D1RB88 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB88_9CHLA Length = 314 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 16/151 (10%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV-------ML 254 L+ A L G++VA+ + LA R+ NA+ + A K+RPA PL + + Sbjct: 5 LEKACELLSQGEVVALPTETVYGLAASLRHPNAIENIFALKNRPANNPLIIHVSHYEQIY 64 Query: 255 PVADGLP----DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 P A +P A+ P ++ + +P + + DL +P +PL + Sbjct: 65 PYAQSIPPYFVKLAQHFWPGPLTLVLPIQPATIP---NTVRADLTTAAFRIPQHPLSQAV 121 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADL 341 ++++ P+VM S NLSG+P A + D Sbjct: 122 IKQV-GPVVMPSANLSGRPSATQASRVEEDF 151 >UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Ruminococcaceae RepID=D1PKX4_9FIRM Length = 339 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGL----PDAA 264 L+ G++VA+ + +A DARN +AV + K RP PL V + D L + Sbjct: 20 LRQGELVALPTETVYGIAADARNGDAVRKIFEAKGRPQDNPLIVHICGMDMLQGIVSEVP 79 Query: 265 RQLLTTPAA----PIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 + L AA P+ +V + E+ + L+ VGV +P++P+ +++ Sbjct: 80 ERALKLAAAFWPGPLTMVMPRGA-EVSEVTCAGLDTVGVRMPSHPVVQAVIKASGVAFAA 138 Query: 321 TSGNLSGKPPAISNEQALADLQG 343 S NLSGKP + + LAD+ G Sbjct: 139 PSANLSGKPSPTNAQDTLADMHG 161 >UniRef50_C8NEC0 Acylphosphatase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NEC0_9LACT Length = 90 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPET---FLVQLYQHC 65 Q+R+ G+VQGVGFR F QLA QL + G V N DG + + + +P F+ ++ Sbjct: 5 QIRVWGRVQGVGFRFFTQQLAIQLEITGTVQNKMDGSVLAVAQGEPNAVNRFIERVKAST 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTI 90 P R+D E + + L T+F I Sbjct: 65 SPYGRVDRYEECSLMDAPLFTKFEI 89 >UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6_LISW6 Length = 345 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 9/159 (5%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV------ 252 ++ Q A L+ G+ VA + L DA N A+ + K RP+ PL V Sbjct: 15 QSIYQEAAKLLQKGECVAFPTETVYGLGADATNQAAIQKIYTAKGRPSDNPLIVHIARRE 74 Query: 253 -MLPVADGLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 M + P A QL+ P+ L+ L +++ L+ VGV +P +P+ L Sbjct: 75 QMDQFVESYPPKAIQLMEKFWPGPLTLILPLIKDSLAANVSAGLSTVGVRMPEHPVSLDL 134 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 ++ P+ S N SGKP + + DL G G + Sbjct: 135 IKTANIPVAAPSANRSGKPSPTTAAHVIEDLDGKIAGII 173 >UniRef50_Q0VTD8 Putative ribosome maturation factor rimN n=3 Tax=Gammaproteobacteria RepID=RIMN_ALCBS Length = 182 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 11/179 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA--------KPLAVML 254 L +A ++ G +VA + L CD N NAV L A KHRP + LA + Sbjct: 5 LLSAAQIIQEGGVVAYPTESVYGLGCDPFNRNAVMQLLAIKHRPVSKGLILIGESLAQLA 64 Query: 255 PVADGLPDAARQLLTTPAAPIV-LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P + QL API LVD L + + +V V +P +PL L Q Sbjct: 65 PYLHLNEQQSAQLEKKWPAPITYLVDAS--DRLPAWVRGEHRKVAVRVPDHPLARQLCQL 122 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLR 372 P++ TS N+SG+P A + Q L D + D + + ESG +LR Sbjct: 123 AGQPIISTSANISGRPAARNRYQVARQLGNQLDFIVSGACDRAAKPSTIIDLESGRILR 181 >UniRef50_A8F4E8 Acylphosphatase n=1 Tax=Thermotoga lettingae TMO RepID=ACYP_THELT Length = 89 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHC---P 66 ++I G+V GVGFR F ++LA ++ + G V N DG VE+ E PE LV+ + P Sbjct: 6 IKISGRVHGVGFRYFTYKLANKMKIKGYVRNAEDGSVEIH-AEAPEEILVEFLKAVSIGP 64 Query: 67 PLARIDSVERE 77 P+A + SV+ E Sbjct: 65 PMATVISVKYE 75 >UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ3_9FIRM Length = 337 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 18/153 (11%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGLPDAARQLL 268 +K G++VAI + LA DA N +A A + K RP PL + + D L ++ +++ Sbjct: 20 IKKGEVVAIPTETVYGLAADAYNPDACAKIFKAKGRPQDNPLIIHICDLDMLKNSVKEI- 78 Query: 269 TTPAAPIVLVDKKYVPELC-----DDIAPD-----LNEVGVMLPANPLQHLLLQELQCPL 318 P + L + + L DI PD L+ V V +P N L++ PL Sbjct: 79 --PPLALTLAEHFWSGSLTMIFPKKDIVPDTTSGGLDTVAVRMPDNEDTLNLIKMCGVPL 136 Query: 319 VMTSGNLSGKPPAISNEQALADLQG----IADG 347 S NLSG P + + AD+ G I DG Sbjct: 137 AAPSANLSGSPSPTTAQHVYADMNGRIPLIIDG 169 >UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firmicutes RepID=B8I564_CLOCE Length = 359 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 14/156 (8%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML--- 254 E AL+ A LK G VA + L +A + AV+ + K RP+ PL V + Sbjct: 14 NENALKPAAEALKQGMTVAFPTETVYGLGANALDGIAVSKIFKAKGRPSDNPLIVHIADR 73 Query: 255 ----PVADGLPDAARQLLTTP-AAPIVLVDKK--YVPELCDDIAPDLNEVGVMLPANPLQ 307 + +PD A L+ P+ LV KK +P+ +I L+ VG+ +P +P+ Sbjct: 74 EKVSELTSFIPDKAVALMDKLWPGPLTLVMKKSSVIPK---EITAGLDTVGIRMPEHPVA 130 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 L++ P+ S N+SGKP + + L DL G Sbjct: 131 LELIKLAGIPVAAPSANVSGKPSPTAAQHVLDDLDG 166 >UniRef50_Q65UA8 Acylphosphatase n=4 Tax=Pasteurellaceae RepID=ACYP_MANSM Length = 90 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQL---YQHCP 66 Q + G VQGVGFR F W+ A ++ L+G V N DG L E + + H P Sbjct: 5 QFVVYGIVQGVGFRYFTWKKATEIGLNGIVKNQRDGSVYILAEGSASQIDSFRDWLSHGP 64 Query: 67 PLARIDSVEREPF 79 P AR+D VE + Sbjct: 65 PSARVDRVEENDY 77 >UniRef50_Q2S263 SUA5 protein n=2 Tax=Rhodothermaceae RepID=Q2S263_SALRD Length = 330 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 10/157 (6%) Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML-------PVA 257 A +L+ G++VA + L DA +AV + K RPA PL V L VA Sbjct: 27 AADRLRRGELVAFPTETVYGLGADAFQPDAVRRIFEAKGRPADNPLIVHLRRRDQIGQVA 86 Query: 258 DGLPDAARQLLTTPA-APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 +P A+ LL A P+ L+ K+ +L + L VGV +P PL L+ Sbjct: 87 ARVPSVAQHLLDAFAPGPLTLILPKH-EDLPSVVTAGLETVGVRVPRLPLTQSFLEACDT 145 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 P+ S N SG+P S E DL G D L R Sbjct: 146 PVPAPSANRSGRPSPTSWEAVEHDLAGRIDCILQGGR 182 >UniRef50_A3EWE3 Putative acylphosphatase n=2 Tax=Leptospirillum sp. Group II RepID=A3EWE3_9BACT Length = 99 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG---VEVRLREDPETFLVQLYQHCPPLA 69 + G+VQGVGFR +V A++++L G V N DG +EV E LV+L + PP + Sbjct: 15 VTGRVQGVGFRAYVQHFAKRMHLSGFVENRPDGSVYLEVTGSESDVDSLVRLVKKGPPAS 74 Query: 70 RIDSVEREPFIWSQLPTE--FTIRQS 93 + VER+ + S +P F IR+S Sbjct: 75 EVSGVERKR-LSSGVPHRGPFEIRRS 99 >UniRef50_UPI0000E87FE5 Putative translation factor n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FE5 Length = 324 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 16/165 (9%) Query: 197 AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL-RARKHRPAKPLAVMLP 255 A + A+ LK GK+V + + LA DA +++A+ + R +K P PL + LP Sbjct: 8 ATDSDCINQAVTLLKDGKLVGLPTETVYGLAADATHTSAIQEIFRVKKRPPNHPLILHLP 67 Query: 256 V-------ADGLPDA----ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 A +PD A+Q + P + VL+ K P + + I N++ + +P + Sbjct: 68 DLSDLSQWAINIPDITYALAKQFM--PGSLSVLLHKN--PSVSNAITGGSNKICIRIPHH 123 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +++ L P+V S N+ G+ S E + DL G D + Sbjct: 124 ETTLKIIERLGSPIVAPSANIFGRISPTSAEHVMQDLFGEIDAVV 168 >UniRef50_Q73PK2 Acylphosphatase n=1 Tax=Treponema denticola RepID=ACYP_TREDE Length = 94 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLREDPETF-- 57 M K T + + ++G+VQGVGFR + LA+ LN+ G V N D VE+ D +T Sbjct: 1 MDKETLRALHVIVKGRVQGVGFRYWTRSLAKSLNVKGRVRNLADYSVEIIAEADTDTLGE 60 Query: 58 LVQLYQHCPPLARIDSVERE 77 V +H P AR++S+ E Sbjct: 61 FVYALKHEHPYARVESLNSE 80 >UniRef50_C5VE15 Sua5/YciO/YrdC/YwlC family protein n=16 Tax=Actinomycetales RepID=C5VE15_9CORY Length = 227 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 15/188 (7%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR-PAKPLAVML---PVAD 258 ++AA+ +K G++V + + L CDA +++AVA L A K R P P+ V++ A Sbjct: 18 IKAAVGAVKSGRLVVLPTDTLYGLGCDAFDNDAVARLLAAKDRGPDMPVPVLVGSWDTAR 77 Query: 259 GL----PDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ 312 GL D R L+ P ++V + P L ++ V + +P +P+ LL+ Sbjct: 78 GLVHSYNDQLRTLIEAFWPGGLSIVVPQA--PSLMWNLGDTRGTVMLRMPLHPVAIELLR 135 Query: 313 ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLR 372 E P+ ++S N+SG+PPA + A L + +L V + S++ SG+ R Sbjct: 136 E-TGPMAVSSANISGQPPATTAAMAEEQLGDKVNVYLDGGETSVG-VASSIIDVSGDQPR 193 Query: 373 RSR-GYVP 379 R G +P Sbjct: 194 LLREGAIP 201 >UniRef50_D2RP50 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RP50_ACIFE Length = 368 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 14/153 (9%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV------ 252 EA L A L+ G++VA + L D N A + A K RPA PL + Sbjct: 15 EAQLAPAARLLQQGEVVAFPTETVYGLGADGLNGEACRKIFAAKGRPADNPLILHISEKE 74 Query: 253 -MLPVADGLPDAARQLLTT--PAAPIVLVDKK-YVPELCDDIAPDLNEVGVMLPANPLQH 308 +LP+ GL A +L+ P ++V K +PE+ + V V P+NP+ Sbjct: 75 EILPLTSGLSPMAEKLMEAFWPGPMTLIVPKSDRIPEV---VTAGQETVAVRFPSNPVAR 131 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 L++ PL S N SGKP + + L D+ Sbjct: 132 ALIRLTGRPLAAPSANKSGKPSPTNAQDVLQDM 164 >UniRef50_Q08A23 Putative ribosome maturation factor rimN n=14 Tax=Shewanella RepID=RIMN_SHEFN Length = 188 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 18/182 (9%) Query: 205 AAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP--------AKPLAVMLPV 256 A ++ G ++A F L CD N +A+ L K RP A +LP Sbjct: 8 AVATTIQQGGVIAYPTEAVFGLGCDPDNDSAIEKLLVVKQRPWQKGLILVASSFEQLLPY 67 Query: 257 ADGLPDAARQLLTTPAA-----PIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 D +QL + V+ + +V +L + + + + V + A+P+ L Sbjct: 68 LDITQLTEQQLQFAQSKWPGPFTFVMPIQSHVSKL---LCGEFDSIAVRVSAHPVVRELC 124 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR-ESGEM 370 L PLV TS NL+G+ P + + + D D LI + QR +++ SG++ Sbjct: 125 DTLNKPLVSTSANLAGEQPVVDAQHIITDFSDKIDA-LILGKLGEQRQPSTIIDARSGQI 183 Query: 371 LR 372 LR Sbjct: 184 LR 185 >UniRef50_C2ME81 Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Bacteria RepID=C2ME81_9PORP Length = 230 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 15/141 (10%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVA 257 E +A + A+ L+ G I+ + L CDA N AV L A K RP +ML + Sbjct: 44 ETLSAAREAVDVLQRGGIILYPTDTIWGLGCDATNEEAVDRLSALKGRPTGKPMLMLVDS 103 Query: 258 D--------GLPDAARQLLTTPAAPIVLV---DKKYVPELCDDIAPDLNEVGVMLPANPL 306 D +P A QL+ P+ ++ + P+L +A D +G+ + ++ L Sbjct: 104 DMRIPSYVRTVPSMAYQLIDVAVRPLTIIYPGGRNVAPQL---LAED-GSIGIRIASDTL 159 Query: 307 QHLLLQELQCPLVMTSGNLSG 327 + + L+ PLV TS NL+G Sbjct: 160 CQEICRLLRRPLVSTSANLAG 180 >UniRef50_A6P084 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P084_9BACE Length = 341 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 12/157 (7%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVAD--- 258 +Q A LK G ++ I + L + AVA + A K RP PL + +P AD Sbjct: 11 IQEAAEILKRGGLLGIPTETVYGLGASGLDPEAVAHIFAAKGRPQDNPLILHVPSADWLE 70 Query: 259 ----GLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ 312 +PDAA L P +++ +K P + D + L+ VG+ P + + ++ Sbjct: 71 RYCEDIPDAAYALAERFWPGPMTMILRRK--PIVPDAVTAGLDTVGMRCPDHGVTRAIIA 128 Query: 313 ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 P+ SGN SG+P S L D+ G DG + Sbjct: 129 AAGVPVAAPSGNTSGRPSPTSAADMLEDMDGKIDGIV 165 >UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3T1_9PLAN Length = 325 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 14/137 (10%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 +QAA +++G++VA + L +A N AVA + A K RP PL V + L Sbjct: 9 IQAAANLIRLGELVAFATETVYGLGANALNPEAVAQIFAVKQRPHFDPLIVHIASTGQLD 68 Query: 262 DAARQLLTTPA--------APIVLV--DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 + + +T P+ LV KK VP+L + L+ V + +PA+P+ LL Sbjct: 69 ELTTEFSSTAEKLASTFWPGPLTLVLPKKKVVPDL---VTSGLDSVAIRIPAHPVARKLL 125 Query: 312 QELQCPLVMTSGNLSGK 328 + Q P+ S N G+ Sbjct: 126 EITQLPIAAPSANKFGR 142 >UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostridium RepID=C9XS85_CLODC Length = 353 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 24/167 (14%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV----- 252 +E +QA + L+ GK V + L +A + NAV + K RP+ PL V Sbjct: 23 EEIKIQAKL--LREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEK 80 Query: 253 --MLPVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAP-----DLNEVGVMLPA 303 + +A + D A+ ++ P ++++KK DI P L+ V + +P+ Sbjct: 81 EEVYDLAKDISDKAKLVIEKLWPGPITIILNKK-------DIIPYKTSGGLDTVAIRMPS 133 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 N + +++E P+ S N+SG+P + ++ G DG ++ Sbjct: 134 NVIARAIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVL 180 >UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ25_HALOH Length = 364 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPV 256 ++ A++ + L+ G++VA + L DA + +AV + K RP PL V + Sbjct: 26 KENDAIREGASLLQKGEVVAFPTETVYGLGADATSESAVKKIFKAKGRPRDNPLIVHIGE 85 Query: 257 ADGLPDAARQLLTTPA---------APIVLV--DKKYVPELCDDIAPDLNEVGVMLPANP 305 D L D + L+ P+ L+ K+ +P + L V V P NP Sbjct: 86 MDQLYDIIKNPLSDTTRRLIKHFWPGPLTLIFEKKETIPGVT---TAGLESVAVRFPDNP 142 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG----IADG 347 + L+ P+ S NLSG P E DL+G I DG Sbjct: 143 VARALIGLSSVPVAAPSANLSGSPSPTRAEHVFKDLKGRIPFIIDG 188 >UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales RepID=A5VIP8_LACRD Length = 342 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 20/168 (11%) Query: 193 HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA----- 247 HGE A+ AA+ K G++VA + L DA N AV + K RP+ Sbjct: 8 HGEIAQAAAAI-------KRGELVAFPTETVYGLGADATNEKAVKNVYLAKGRPSDNPLI 60 Query: 248 ---KPLAVMLPVADGLPDAARQLLTT--PAA-PIVLVDKKYVPELCDDIAPDLNEVGVML 301 +A++ A +PD AR+L+ P + I+L KK L + L V Sbjct: 61 VHVNSIAMVEKYAAEIPDNARKLMDAFWPGSLTIILKIKKGA--LSKTVTGGLKTVAFRY 118 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 P L++E P+V S N SGKP + + DL G G + Sbjct: 119 PDCQPTLDLIEEAGVPMVGPSANTSGKPSPTTAQHVYHDLHGKISGIV 166 >UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RH22_ANAPD Length = 344 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 18/167 (10%) Query: 195 EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPL--- 250 E+ +++ +AA+ L+ G++VAI + L + + A + K+RPA PL Sbjct: 11 ENIDEDIIKRAAVL-LRRGELVAIPTETVYGLGANGLDEKACLNIFKTKNRPADNPLILH 69 Query: 251 ----AVMLPVADGLPDAARQLLTTPAAPIVLVDKK--YVPELCDDIAPDLNEVGVMLPAN 304 ++ + + + D A++L+T P+ ++ KK +PE+ + + V V P + Sbjct: 70 ISNKEMLYNLVEDVSDDAKKLMTLWPGPLTMIFKKSEIIPEV---VTAGGDTVAVRFPVD 126 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG----IADG 347 + +++E P+ S N+SG+P + DL G I DG Sbjct: 127 EIARRIIEEANIPIAAPSANISGRPSPTNASDCYYDLNGKIPLIIDG 173 >UniRef50_B8FG73 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FG73_DESAA Length = 214 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 14/141 (9%) Query: 202 ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGL 260 A+ A+ LK G +V G + LA A + AVA + K RP KPL +++ D + Sbjct: 16 AINQAVRILKEGGVVVFPTTGLYGLAAKASDPQAVAEVFRIKGRPDDKPLLILVDSIDQV 75 Query: 261 PDAARQLLTTPAAPIVLVDKKY------VPELCDDIAPDL----NEVGVMLPANPLQHLL 310 R++ P + +L++K + V D + P L ++G+ + A+P+ L Sbjct: 76 KPLVREV---PESGRLLMEKLWPGGITLVFCASDLLPPSLLGGKKKIGIRMAAHPVARAL 132 Query: 311 LQELQCPLVMTSGNLSGKPPA 331 ++ L P+ TS NLSG+P A Sbjct: 133 VKGLGEPITGTSANLSGEPGA 153 >UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular organisms RepID=YWLC_BACSU Length = 346 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 195 EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVM 253 E + + + A A L+ ++VA + L +A+N++AV + K RP+ PL V Sbjct: 13 ELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVH 72 Query: 254 LPVADGL-------PDAARQLLTT--PAAPIVLVDKKYVPE-LCDDIAPDLNEVGVMLPA 303 + L P+ A+ L+ P A +++ K P+ L + L V + +P Sbjct: 73 IADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCK--PDALSPRVTAGLETVAIRMPD 130 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ----GIADG 347 +PL L++E P+ S NLSGKP E DL GI DG Sbjct: 131 HPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDG 178 >UniRef50_B4S388 Acylphosphatase n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S388_PROA2 Length = 91 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG---VEVRLREDPETFLVQLYQHC 65 V+ + G+VQGVGFR F++Q A +L L G V N +G ++V+ E+ T L++ Sbjct: 5 VRAEVSGRVQGVGFRMFIFQKAIRLGLVGQVGNLDNGNVAIDVQGSEELVTKLLEAAHSG 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIR 91 PP A + + +P LP + +R Sbjct: 65 PPAATVSDITVQP-----LPLDMAVR 85 >UniRef50_C4XRP1 Acylphosphatase n=2 Tax=Desulfovibrio RepID=C4XRP1_DESMR Length = 96 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCP---PL 68 + GKVQGV FR +V+ A L L G V N DG VEV + DPE L L + P PL Sbjct: 14 VSGKVQGVYFRAWVYDQAASLGLRGWVRNLADGQVEVLAQGDPEA-LAALKERLPQGSPL 72 Query: 69 ARIDSVEREPFIWSQLPTEFTIR 91 +R+D+V + F IR Sbjct: 73 SRVDAVAATMIDHDKAYDAFAIR 95 >UniRef50_Q26EU1 SUA5/YciO/YrdC/YwlC domain protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26EU1_9BACT Length = 216 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 9/134 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL-RARKHRPAKPLAVMLPVADGL- 260 ++ A+ LK GK++ + + CDA N +A+ L + +K +K L +++ + L Sbjct: 35 VREAVTALKKGKVILYPTDTIYGIGCDATNYDAIEELYKIKKRDRSKSLIILVDSFEMLD 94 Query: 261 ------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 P+ A Q+L P+ ++ + + IA D N + + + +P+ L++ L Sbjct: 95 RYIEEVPEMAWQVLKLNKKPLTIIYDRPKAVAENLIAAD-NTLAIRVTNDPVCRALIRGL 153 Query: 315 QCPLVMTSGNLSGK 328 + P+V TS NLSG+ Sbjct: 154 RKPIVSTSANLSGE 167 >UniRef50_C5NXQ4 SUA5 domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXQ4_9BACL Length = 343 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 10/168 (5%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA- 247 E ++ + +E K GK+VAI + L+ +A + AV+ + K RP+ Sbjct: 4 EIINISKSESKEEIYSKLTEYYKRGKLVAIPTETVYGLSANAMDDEAVSKIYEAKGRPSD 63 Query: 248 KPLAVML-------PVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVG 298 PL V + D + ++L+ P ++++ K + + LN + Sbjct: 64 NPLIVHFYEMSQLDEIVDYSDENVKKLIDKFWPGPMTLILNVKENNGISKKVTAGLNTLA 123 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 V +P+N +L+E + L S N SGKP E DL G D Sbjct: 124 VRMPSNVTARGILKETEILLAAPSANTSGKPSPTKFEHVYHDLNGKID 171 >UniRef50_A7BDQ1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDQ1_9ACTO Length = 224 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 13/150 (8%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK-PLAVMLPVA 257 EA L A +L+ G ++ + + + DA N AVA + A K R + P V++ Sbjct: 17 SEADLARAQRELRDGHLLVVPTDTVYGIGADAANPEAVAAVLAAKGRGRQMPPPVLVASV 76 Query: 258 DGL-------PDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 D + P+AAR L P +++ + P+L D+ +GV +P Sbjct: 77 DAIDLLCVDIPEAARALARAFWPGGLTLILRAR--PDLGWDLGETGGTIGVRMPNQAALL 134 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQAL 338 LL + P+ +TS NL+G+PPA S EQA+ Sbjct: 135 RLLHDF-GPMAVTSANLTGQPPATSVEQAV 163 >UniRef50_A5GS00 Acylphosphatase n=2 Tax=Synechococcus RepID=ACYP_SYNR3 Length = 117 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 5/70 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHC--- 65 + RIRG VQGVG+R + AQ+L L G V N DG VEV+ E E L +L C Sbjct: 23 RFRIRGLVQGVGYRAGCCRRAQELGLAGWVRNCSDGSVEVQA-EGDEQRLTELRVWCEGG 81 Query: 66 PPLARIDSVE 75 PP AR+DSV+ Sbjct: 82 PPGARVDSVD 91 >UniRef50_UPI00015B545B PREDICTED: similar to conserved hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B545B Length = 266 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR-PAKPLAVMLPVADG--------- 259 L+ GKIVA+ + LA A+N +VA L K R +KPLA+ L D Sbjct: 39 LRNGKIVAMPTDTIYGLAGLAQNDASVARLYEIKKRDESKPLAICLWDVDDIENWAHVED 98 Query: 260 LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLV 319 LPD Q L +VL K L + P + VG+ +P +++ L P+ Sbjct: 99 LPDGLLQALLPGPTTLVLKRKS---SLNPHLNPGVENVGIRIPKYDFIRSVVKMLNQPIA 155 Query: 320 MTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVP 379 +TS N S P ++ E+ L DG ++M+ ++ES RG Sbjct: 156 LTSANESNAPSSLHPEE-FQSLWPELDGVF------YEKMNLGTIKESWR-----RGSTV 203 Query: 380 DALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 L + F +L G + TF ++R Q ++ +++ G Sbjct: 204 VDLTVAGQFS----ILRRGIGYQTTFRVLREHQLTYQKNTKNVAGQG 246 >UniRef50_A3CYL0 Putative ribosome maturation factor rimN n=9 Tax=Gammaproteobacteria RepID=RIMN_SHEB5 Length = 188 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRP--------AKPLAVMLPVADGLPDAA 264 G ++A + L CD N A+ L A K RP A +L D A Sbjct: 16 GGVIAYPTEAVYGLGCDPDNDTAIQKLLAVKQRPWQKGLILVASDFQQLLAYVDESQLTA 75 Query: 265 RQL---LTTPAAPIVLV--DKKYVPE-LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPL 318 QL + P V K +V + LC + + + V + A+ L + L PL Sbjct: 76 EQLEFAFSKWPGPFTFVMPIKAHVSKYLCGE----FDSIAVRVSAHAGVQALCRALNKPL 131 Query: 319 VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR-ESGEMLRRSR 375 V TS NL+G+ PA++ + LAD G D ++ QR +++ SG++LR + Sbjct: 132 VSTSANLAGEDPALTAAEILADFTGKIDALVLGELG-EQRQPSTIIDARSGKILRNGQ 188 >UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cellular organisms RepID=A6TK48_ALKMQ Length = 356 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 14/151 (9%) Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLP-------VADGLP 261 ++ GK VA + L +A +S A+ + K RP+ PL V + + +P Sbjct: 28 IREGKTVAFPTETVYGLGANALDSKAINKIFVAKGRPSDNPLIVHVAHRVEVDALVRVIP 87 Query: 262 DAARQLLTTP-AAPIVLVDKKY--VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPL 318 + A++L+ P+ LV +K +P +I+ L+ V + +P +P+ L+++ P+ Sbjct: 88 EKAKKLMAHFWPGPLTLVMEKSHGIP---GEISAGLSTVAIRMPVHPIARTLIEKAGVPV 144 Query: 319 VMTSGNLSGKPPAISNEQALADLQGIADGFL 349 S N SGKP + DL+G D + Sbjct: 145 AAPSANTSGKPSPTRAAHVIQDLRGKVDAII 175 >UniRef50_Q86U90 YrdC domain-containing protein, mitochondrial n=28 Tax=Eumetazoa RepID=YRDC_HUMAN Length = 279 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 16/153 (10%) Query: 195 EHAEQEAALQAAIAQLKMGKIVAIKG---IGGFHLACDARNSNAVATLRARKHRPAKPLA 251 E A AL+AA+A+L+ G +VA+ G A + AV L+ R AKPLA Sbjct: 62 ERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSE--AKPLA 119 Query: 252 VMLP-VAD-------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 V L VAD +P+ + L P+ LV ++ EL D+ P VG+ +P Sbjct: 120 VCLGRVADVYRYCRVRVPEGLLKDLLP--GPVTLVMERS-EELNKDLNPFTPLVGIRIPD 176 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQ 336 + L Q + PL +TS NLS + +++ E+ Sbjct: 177 HAFMQDLAQMFEGPLALTSANLSSQASSLNVEE 209 >UniRef50_A4IG71 Zgc:162301 protein n=1 Tax=Danio rerio RepID=A4IG71_DANRE Length = 235 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 20/152 (13%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAV---- 252 E L + LK G++VA+ + LAC A+NS A+ + K R KPLA+ Sbjct: 26 EWTEILSCTVNALKAGQVVAVPTDTIYGLACVAQNSEAIRRVYDIKGRNGDKPLAICVGE 85 Query: 253 --------MLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + V D L R LL P+ LV ++ L D+ P +GV +P + Sbjct: 86 IHDIYKYCKVSVKDRL---LRDLL---PGPVTLVLERSA-TLNGDLNPFTKLIGVRIPDH 138 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQ 336 P L Q PL +TS N+S + ++ + Sbjct: 139 PFMRRLCQMCDTPLALTSANVSTQSSTVAANE 170 >UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Thermotogaceae RepID=A8F706_THELT Length = 338 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 10/157 (6%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVA 257 E L+ A +K G +VA + L D N +AV + K+RPA PL + + Sbjct: 13 NEGILRKAAQTIKEGGVVAFPTETVYGLGADCFNISAVLKIFQIKNRPADNPLIIHIYDK 72 Query: 258 DGLPDAARQLLTTPA--------APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 L + + + P+ + +K + ++ L V + +P++P+ + Sbjct: 73 KQLEELVEGDIEQNSYVMDVFWPGPVTFIFRKKA-NVPKEVTGGLETVAIRMPSHPVAQV 131 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 L+ P+ S NLSGKP E +ADL G D Sbjct: 132 FLRLSGTPVAAPSANLSGKPSPTRAEHVIADLYGSVD 168 >UniRef50_C8QXS3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXS3_9DELT Length = 221 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%) Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR-PAKPL 250 +H E A L+ A A ++ G IVA + LA D N A++ L A K R P KP+ Sbjct: 5 NHPEAVVTPAELEQAAAIIRRGGIVAFPTETYYGLAVDPFNREALSRLFALKRRAPDKPI 64 Query: 251 AVMLP-------VADGLPDAARQLLTTP-AAPIVLV--DKKYVPELCDDIAPDLNEVGVM 300 ++P +AD +P + L+ P+ L+ ++ VP + VGV Sbjct: 65 LCLVPDREHLFSLADSIPPSYEPLMEAFWPGPLTLIFTAREEVPVSLTGYS---GTVGVR 121 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA----DLQGIADG 347 L ++P+ L Q + TS N SG P A++ + A D+ I DG Sbjct: 122 LSSHPVAARLAQIYGGAITATSANFSGHPAAVNAAEVGAQLGPDVDYILDG 172 >UniRef50_O27727 Conserved protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27727_METTH Length = 208 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 17/153 (11%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL-RARKHRPAKPLAVMLPVADGLP 261 L+ AI+ ++ G IV + L +A + +AV L R + P KP+++ + D +P Sbjct: 16 LEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIP 75 Query: 262 DAAR----------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 +R ++L P +VL + +P D I + VG+ +P + + + Sbjct: 76 RFSRPSGDAMELMERILPGPYT-VVLERNELIP---DVITGGSSRVGIRVPDDEICRRIA 131 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 P+ TS N+SGKPP+ E+ + DL + Sbjct: 132 ARF--PVTATSANISGKPPSPRLEEIVRDLDAV 162 >UniRef50_A2SSU7 Translation factor SUA5 n=5 Tax=Methanomicrobiales RepID=A2SSU7_METLZ Length = 198 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 15/149 (10%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLP-- 255 +E+ ++ A+ L +V + L DA + AV + K RP KP++V + Sbjct: 6 EESRIEKAVRVLSRDGLVVYPTETVYGLGADALSDTAVIKVYEAKQRPLGKPISVAVSDI 65 Query: 256 -----VADGLPDAAR---QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 +AD P A R + L P IVL K +P D++ +G+ P + L Sbjct: 66 EMIYGIADVSPFAERFISKFLPGPVT-IVLPVKNCLP---GDLSGGTGTIGIRYPDHTLA 121 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQ 336 L+ CP+ TS N+SG+ +S +Q Sbjct: 122 LELISMFDCPITATSANISGEISPVSVDQ 150 >UniRef50_Q2LR93 Sua5/yciO/yrdC/ywlC family protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LR93_SYNAS Length = 217 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 16/163 (9%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA---TLRARKHRPAKPLAV--- 252 + A LQ L+ G++VA + L DA N A+ +++ R+ PL + Sbjct: 15 EPALLQHVAENLRKGRVVAYPTETFYGLGADAGNERAIEKIFSIKGRQFNNPIPLIIGDR 74 Query: 253 --MLPVADGLPDAARQLLTT----PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 + + +P+AA++L+ P + K P L + +G+ + ++P+ Sbjct: 75 DELDSLVTAIPEAAQRLIHVFWPGPLTLVFRASKNVSPRL----TANTGLIGIRISSHPI 130 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 L + L PL TS N SG+ + + + L + DG + Sbjct: 131 ARSLARSLGAPLTATSANFSGQKESTTAHEVARTLGSLIDGIV 173 >UniRef50_B1L6Z2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6Z2_KORCO Length = 209 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 17/195 (8%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKP---------- 249 E+ + + L+ GK++ + L DA N +AV + K RP + Sbjct: 11 ESTIDEVVDALRKGKLIIYPTDTVYGLGADAENIDAVRRVYEVKGRPEEKRLTIAVSDID 70 Query: 250 LAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 +A V D + + +L VP++ + A +G+ +P P+ Sbjct: 71 MAERYAVVDEISRRLMEKFLPGKVTFILKKTSRVPDIVNPEA-----IGIRIPNIPIILR 125 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 +++E + TS N SG PP + E+A +++ AD L + R R V GE Sbjct: 126 IIREFGGAITATSANKSGSPPKLDPEEAAMEIE--ADLLLDYGRLPPSRPSTIVDLTRGE 183 Query: 370 MLRRSRGYVPDALAL 384 + G VP +L + Sbjct: 184 PVLVREGDVPFSLVM 198 >UniRef50_C1BLI9 Putative uncharacterized protein YWLC n=1 Tax=Osmerus mordax RepID=C1BLI9_OSMMO Length = 268 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML 254 H + L A + LK G++VA+ + LAC A+NS+A+ + K R KPLA+ + Sbjct: 57 HPDGAEILDATVQSLKEGQVVALPTDTIYGLACLAQNSDAIKRVYEIKGRNGQKPLAICV 116 Query: 255 PVADGL---------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 + + ++LL P+ LV ++ L D+ P VGV +P +P Sbjct: 117 GEIQDIYKYCKVSVKEELLKELL---PGPVTLVLQRST-VLNTDLNPFTPLVGVRIPNHP 172 Query: 306 LQHLLLQELQCPLVMTSGNLS 326 L Q PL +TS N+S Sbjct: 173 FMRRLCQLCAEPLALTSANIS 193 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacter... 1174 0.0 UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus... 1012 0.0 UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 ... 1009 0.0 UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 T... 1008 0.0 UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 T... 1006 0.0 UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 T... 1005 0.0 UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 T... 1004 0.0 UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 T... 987 0.0 UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 T... 986 0.0 UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 T... 985 0.0 UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 T... 985 0.0 UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 ... 982 0.0 UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 968 0.0 UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 T... 966 0.0 UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 T... 964 0.0 UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophu... 962 0.0 UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 T... 961 0.0 UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 T... 959 0.0 UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 ... 959 0.0 UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, puta... 952 0.0 UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 T... 949 0.0 UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 T... 947 0.0 UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 T... 946 0.0 UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protei... 945 0.0 UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=... 944 0.0 UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis ... 942 0.0 UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 T... 940 0.0 UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 T... 939 0.0 UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Ta... 933 0.0 UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 T... 933 0.0 UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 ... 931 0.0 UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogen... 927 0.0 UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 T... 926 0.0 UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 T... 926 0.0 UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 T... 925 0.0 UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carb... 923 0.0 UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 T... 921 0.0 UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clo... 920 0.0 UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulf... 918 0.0 UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 T... 916 0.0 UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacterac... 914 0.0 UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 T... 914 0.0 UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=... 914 0.0 UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteri... 914 0.0 UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 T... 912 0.0 UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory prot... 911 0.0 UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 T... 906 0.0 UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legi... 906 0.0 UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shew... 905 0.0 UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 T... 905 0.0 UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 T... 904 0.0 UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Stre... 904 0.0 UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 T... 901 0.0 UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostri... 901 0.0 UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 T... 901 0.0 UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 T... 899 0.0 UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia i... 898 0.0 UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 T... 897 0.0 UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 T... 897 0.0 UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Eury... 896 0.0 UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 T... 895 0.0 UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 T... 893 0.0 UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 T... 890 0.0 UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Meth... 890 0.0 UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein Hyp... 886 0.0 UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 T... 885 0.0 UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collins... 885 0.0 UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legi... 884 0.0 UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=... 884 0.0 UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=... 884 0.0 UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobac... 882 0.0 UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protei... 882 0.0 UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 T... 882 0.0 UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bact... 882 0.0 UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Phot... 881 0.0 UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 T... 881 0.0 UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 T... 880 0.0 UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 T... 879 0.0 UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 T... 879 0.0 UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 T... 879 0.0 UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH 878 0.0 UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 T... 876 0.0 UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 ... 876 0.0 UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 T... 876 0.0 UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 875 0.0 UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 T... 875 0.0 UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 T... 875 0.0 UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM 873 0.0 UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Prot... 873 0.0 UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protei... 872 0.0 UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 T... 870 0.0 UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 T... 870 0.0 UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2... 870 0.0 UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncu... 869 0.0 UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Ta... 869 0.0 UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitr... 867 0.0 UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 T... 866 0.0 UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosa... 864 0.0 UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 T... 863 0.0 UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 T... 862 0.0 UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridi... 862 0.0 UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein Hyp... 861 0.0 UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemm... 860 0.0 UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 T... 859 0.0 UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 T... 856 0.0 UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroida... 856 0.0 UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Fran... 856 0.0 UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 ... 855 0.0 UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 T... 854 0.0 UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyr... 852 0.0 UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria... 852 0.0 UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 T... 852 0.0 UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 T... 851 0.0 UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobac... 851 0.0 UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Nept... 850 0.0 UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 849 0.0 UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 T... 849 0.0 UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST 846 0.0 UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 T... 846 0.0 UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 T... 844 0.0 UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 T... 843 0.0 UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 T... 843 0.0 UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 T... 843 0.0 UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein Hyp... 841 0.0 UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 T... 841 0.0 UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 T... 840 0.0 UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Heli... 839 0.0 UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protei... 838 0.0 UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=... 836 0.0 UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales R... 835 0.0 UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobac... 834 0.0 UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sora... 834 0.0 UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein Hyp... 833 0.0 UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfo... 831 0.0 UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 T... 828 0.0 UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psyc... 825 0.0 UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 T... 818 0.0 UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vi... 817 0.0 UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomy... 815 0.0 UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 T... 813 0.0 UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 T... 812 0.0 UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota ... 808 0.0 UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 T... 808 0.0 UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax... 805 0.0 UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 T... 804 0.0 UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 T... 799 0.0 UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 T... 795 0.0 UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 T... 795 0.0 UniRef50_O28905 Hydrogenase expression/formation regulatory prot... 791 0.0 UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncu... 788 0.0 UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Acti... 786 0.0 UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 T... 779 0.0 UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Phot... 778 0.0 UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alte... 776 0.0 UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 T... 775 0.0 UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 T... 770 0.0 UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 T... 769 0.0 UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=... 768 0.0 UniRef50_UPI000197837F transcriptional regulatory protein HypF n... 760 0.0 UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 T... 757 0.0 UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea R... 756 0.0 UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter ... 754 0.0 UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 T... 751 0.0 UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax... 746 0.0 UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 T... 743 0.0 UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 T... 742 0.0 UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n... 718 0.0 UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phyma... 713 0.0 UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 T... 713 0.0 UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alph... 712 0.0 UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 T... 689 0.0 UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax... 558 e-157 UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collins... 507 e-142 UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 T... 474 e-132 UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 T... 413 e-113 UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mari... 408 e-112 UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=... 378 e-103 UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Bur... 351 5e-95 UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Mag... 320 2e-85 UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thau... 307 1e-81 UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=... 295 5e-78 UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomy... 278 5e-73 UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina ... 253 2e-65 UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synecho... 249 4e-64 UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum ... 226 2e-57 UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium ... 202 4e-50 UniRef50_C4V235 Putative uncharacterized protein (Fragment) n=1 ... 179 4e-43 UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archa... 157 1e-36 UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paeni... 157 1e-36 UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6... 156 2e-36 UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular ... 156 3e-36 UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacte... 156 3e-36 UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Br... 155 7e-36 UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firm... 151 1e-34 UniRef50_A6QAV0 Putative uncharacterized protein n=1 Tax=Sulfuro... 149 3e-34 UniRef50_A6Q3L8 Putative uncharacterized protein n=1 Tax=Nitrati... 149 4e-34 UniRef50_Q8TXM7 Translation factor (SUA5) n=1 Tax=Methanopyrus k... 148 8e-34 UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales... 145 7e-33 UniRef50_Q2S263 SUA5 protein n=2 Tax=Rhodothermaceae RepID=Q2S26... 145 7e-33 UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clost... 143 2e-32 UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinace... 142 3e-32 UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macroco... 142 4e-32 UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Rumin... 142 6e-32 UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC ... 141 7e-32 UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halot... 141 7e-32 UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacte... 140 2e-31 UniRef50_UPI0000E87FE5 Putative translation factor n=1 Tax=Methy... 139 5e-31 UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostri... 137 2e-30 UniRef50_A6P084 Putative uncharacterized protein n=1 Tax=Bactero... 135 5e-30 UniRef50_Q3AQA5 Translation factor SUA5 n=12 Tax=Chlorobiaceae R... 135 6e-30 UniRef50_C0AQL5 Putative uncharacterized protein n=1 Tax=Proteus... 135 7e-30 UniRef50_C9RL80 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fibro... 134 1e-29 UniRef50_D2RP50 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acida... 134 2e-29 UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3... 132 4e-29 Sequences not found previously or not previously below threshold: UniRef50_C7GYT3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Eubac... 149 6e-34 UniRef50_A7HKY2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fervi... 148 8e-34 UniRef50_B3DXI5 Putative translation factor SUA5 n=1 Tax=Methyla... 146 3e-33 UniRef50_A4XJN5 Translation factor SUA5 n=2 Tax=Clostridia RepID... 145 5e-33 UniRef50_C4KYV0 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacil... 145 7e-33 UniRef50_A7VH00 Putative uncharacterized protein n=1 Tax=Clostri... 144 2e-32 UniRef50_C9KMA3 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Veill... 143 2e-32 UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cell... 143 2e-32 UniRef50_Q03EK3 Translation factor SUA5 n=78 Tax=Lactobacillales... 142 3e-32 UniRef50_Q0SQY3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=Clos... 142 4e-32 UniRef50_A9BIX5 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Petro... 142 5e-32 UniRef50_C8WUG5 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Alicy... 141 8e-32 UniRef50_A6UX18 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Eurya... 141 9e-32 UniRef50_C9RAD4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Ammon... 141 1e-31 UniRef50_B8E005 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Dicty... 140 2e-31 UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Therm... 140 2e-31 UniRef50_C1TLJ1 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Syner... 139 3e-31 UniRef50_C5CGY8 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Kosmo... 138 7e-31 UniRef50_A7NRM0 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Bacte... 137 1e-30 UniRef50_C3NRT1 Sua5 YciO YrdC YwlC family protein n=35 Tax=Gamm... 137 2e-30 UniRef50_A8RQH7 Putative uncharacterized protein n=1 Tax=Clostri... 136 3e-30 UniRef50_D0BMJ6 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Granu... 136 4e-30 UniRef50_C4FU51 Putative uncharacterized protein n=1 Tax=Catonel... 135 5e-30 UniRef50_O29477 Putative uncharacterized protein n=1 Tax=Archaeo... 134 9e-30 UniRef50_B7IFU2 Universally conserved protein n=1 Tax=Thermosiph... 134 1e-29 UniRef50_A7E7K5 Putative uncharacterized protein n=1 Tax=Sclerot... 134 2e-29 UniRef50_B1CAL3 Putative uncharacterized protein n=1 Tax=Anaerof... 133 2e-29 UniRef50_A4SZW0 Translation factor SUA5 n=1 Tax=Polynucleobacter... 133 2e-29 UniRef50_A1R0F9 Sua5/YciO/YrdC/YwlC family protein n=24 Tax=Borr... 133 2e-29 UniRef50_A8MAU3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=cell... 133 2e-29 UniRef50_C2KZL7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Firmi... 133 3e-29 UniRef50_B8D397 Putative translation factor n=1 Tax=Desulfurococ... 133 3e-29 UniRef50_B0EKC6 Sua5, putative n=3 Tax=Entamoeba RepID=B0EKC6_ENTDI 132 4e-29 UniRef50_UPI00016C0B40 hypothetical protein Epulo_03232 n=1 Tax=... 132 7e-29 UniRef50_B2A977 Predicted CDS Pa_1_8670 n=1 Tax=Podospora anseri... 131 8e-29 UniRef50_D1VRM2 Protein Sua5 n=1 Tax=Peptoniphilus lacrimalis 31... 131 1e-28 >UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacteriaceae RepID=HYPF_ECOLI Length = 750 Score = 1174 bits (3038), Expect = 0.0, Method: Composition-based stats. Identities = 750/750 (100%), Positives = 750/750 (100%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ Sbjct: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG Sbjct: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA Sbjct: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR Sbjct: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 Query: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM Sbjct: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD Sbjct: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 Query: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG Sbjct: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA Sbjct: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD Sbjct: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA Sbjct: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP Sbjct: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 Query: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP Sbjct: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 Query: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG Sbjct: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 >UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus cereus group RepID=A0RG62_BACAH Length = 793 Score = 1012 bits (2618), Expect = 0.0, Method: Composition-based stats. Identities = 284/769 (36%), Positives = 425/769 (55%), Gaps = 41/769 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 + +++G VQGVGFRPFV+++A++ +L+G V ND +GV + + + F+ + + P Sbjct: 28 KYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIHDIEFNSP 87 Query: 67 PLARIDSVE-REPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRY 124 LA + V+ E + + F I S + T I PD C CL E+ P RR+ Sbjct: 88 ELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRF 147 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPR++II+ +PYDRP+T M FP+C CDKEY+D LDRRFHAQP AC +C Sbjct: 148 RYPFINCTNCGPRYSIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKC 207 Query: 185 GPHLEW-VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP ++ + G + + ++ I LK GKI+AIKG+GG+HL D N AV LR RK Sbjct: 208 GPQVQLKTADGTNVPTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNHEAVKELRKRK 267 Query: 244 HRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP A+M D + + LL + PIVL++KK + D+AP+ N Sbjct: 268 KRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDVAPNNNTY 327 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVML PL HL+L+ L+ TS N+S +P + A+ L+GIAD +L+HNR+I Sbjct: 328 GVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFT 387 Query: 358 RMDDSVVRE--------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+DDS+VR +++RR+RGYVP+ + G N VL LGA+LKNT CL + Sbjct: 388 RVDDSIVRGIDLDDEITKIQIIRRARGYVPNPIDFKEGSTN---VLALGAELKNTICLTK 444 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN-L 468 GE+A +S H+GDL + I ++ + +Q I++ +P + D HP + S+++A + L Sbjct: 445 GEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKYAFDQKTL 504 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH A+C+ ++Q G V+ + LDG G G++G +WGGE L ++ + Sbjct: 505 PVVQVQHHHAHMASCMVDNQLD---GPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYQRA 561 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ---NWSVLARAIERG 585 + LPGGD A K+P+R L + E + ++ VL + I++G Sbjct: 562 AYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKG 621 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----SCHGVTHPVTMPRV 641 IN+PL SS GR FDAV++ LG T+ YEG+AA LE S +++ + Sbjct: 622 INSPLTSSMGRLFDAVSSLLGVR-ETVQYEGQAAIELEQAIDINNSSNPLLSYEIVTSNG 680 Query: 642 DNQLDLATFWQQ----WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 ++D+ +++ L + + ++ FH + Q ++ GI LV SGG Sbjct: 681 IRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVLSGG 740 Query: 698 VIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 V N+ L L F + + +P DGG+SLGQ IAA R+ Sbjct: 741 VFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKD 789 >UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 Tax=Bacteria RepID=B7KHW8_CYAP7 Length = 780 Score = 1009 bits (2610), Expect = 0.0, Method: Composition-based stats. Identities = 299/777 (38%), Positives = 411/777 (52%), Gaps = 52/777 (6%) Query: 1 MAKNTSC-GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PET 56 MA NT+ + L IRG VQGVGFRPF+++LA +L+L G V N GV + + D +T Sbjct: 1 MADNTTKQRLSLIIRGAVQGVGFRPFIYRLATELDLVGWVNNSSVGVFIEVEGDKDQLDT 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEM 116 FL ++ PP ++I ++E + + F IR S G ++PD ATCP CL ++ Sbjct: 61 FLRRVQTENPPRSQIQAIETQWLDLT-GYKTFEIRHSVSGEKTAVVLPDLATCPDCLQDI 119 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P RRYRYPF NCT+CGPR+TII A+PYDR T M F LCP C EY +PLDRRFHA Sbjct: 120 FDPHNRRYRYPFTNCTNCGPRYTIIEALPYDRCHTTMKGFKLCPQCQAEYENPLDRRFHA 179 Query: 177 QPVACPECGPHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 QP ACP+CGPHLE E+AL A ++ GKIVAIKG+GGFHL DARN+ Sbjct: 180 QPNACPKCGPHLELWDQQGQILETHESALMATATAIREGKIVAIKGLGGFHLVVDARNTT 239 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVD--------- 279 AV LR RK RP KP AVM P + L + LL + PIVL+ Sbjct: 240 AVQELRKRKQRPDKPFAVMYPSLNLLKEHCLVTPTEEALLNSAECPIVLLKVLSSNFRSP 299 Query: 280 ---------KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPP 330 + E+ +AP+ +GVMLP PL HLLL EL P+V TSGN+S +P Sbjct: 300 LTPLYKGGNIRKEGEISPAVAPNNPYLGVMLPYTPLHHLLLAELGFPIVATSGNISDEPI 359 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALP-P 386 I +AL L IAD FLIHNR I + +DDS+VR G ++RR+RGY P + + Sbjct: 360 CIDELEALQKLNQIADLFLIHNRPIFRPVDDSIVRMMGGREMVMRRARGYAPFPIMIKSS 419 Query: 387 GFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 + P +L +G LKNT + R Q LSQH+GDL +++ + ++ +YDF P Sbjct: 420 PTHSQPSILAVGGHLKNTIAIARPPQIFLSQHIGDLETPAAFEYFQQVIASLRGLYDFNP 479 Query: 447 QYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 506 Q + DAHP Y+SSQ+A+E NLP V HH+AH +C+AEH V+ + DG G Sbjct: 480 QLIARDAHPDYISSQFAQEQNLPLIKVQHHYAHVLSCMAEHGLEP---PVLGVAWDGTGY 536 Query: 507 GENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE 566 GE+ +WGGE + V + + LPGG+ A K+P R+ L S Sbjct: 537 GEDETIWGGEFIYVTEDHYQRVAHFRPWRLPGGEKAVKEPRRSALGLLEAI--NLPKTSI 594 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 + Q +L +++ +N+PL SS GR FD VA+ L S+EG+AA LE + Sbjct: 595 EKAFTPQELVLLQTILKKHLNSPLTSSVGRLFDGVASLLNIR-HQASFEGQAAMELEFII 653 Query: 627 ASC-HGVTHPVTM-PRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMR 681 + + +D + + LN + Q + FH+ L + +++ Sbjct: 654 GETITDKYYDFLLSSSTPTVIDWSPIIKAILNDIFCNISLGQISVKFHNTLVKIILEIVK 713 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGV 736 +V +GG NR L R L + QS+P DGG++LGQ + Sbjct: 714 RFPAH----QIVLTGGCFQNRYLTERAIEQLQQHHYRPYWHQSIPPNDGGIALGQVI 766 >UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W4C2_9CYAN Length = 847 Score = 1008 bits (2607), Expect = 0.0, Method: Composition-based stats. Identities = 332/824 (40%), Positives = 456/824 (55%), Gaps = 87/824 (10%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++R+RG VQGVGFRP V++LA+ NL G+VCNDG GV + + E F+ +L CP Sbjct: 14 EIRVRGTVQGVGFRPTVYRLAKACNLVGEVCNDGQGVLIYVSGTTEAIADFVQRLQIDCP 73 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA+I+S++R P+ + +FTI QS T+ TQI PDAATCP C AE R Y Y Sbjct: 74 PLAKIESIDRTPYPGDRTFHDFTITQSVNSTVQTQIPPDAATCPQCQAETFDSRSRWYNY 133 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF NCTHCGPR +IIR++PYDR T MA F +CP C +EY +RRFHAQP+ACP CGP Sbjct: 134 PFTNCTHCGPRLSIIRSIPYDRKHTSMADFAMCPDCAREYLAIENRRFHAQPIACPVCGP 193 Query: 187 HLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + ++GE + + LK G+IVAIKG+GG HLACDA N V LR+RK R Sbjct: 194 KVWLERANGEKMDTSDPIDTVCTLLKQGEIVAIKGLGGIHLACDATNETTVQQLRSRKQR 253 Query: 246 PAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVD-------------KKYVPEL 286 KP A+M + L D ++L +P APIVL+D + ++ Sbjct: 254 YHKPFALMARDLEVIEQYCTLNDQEKELFQSPPAPIVLIDVIPNRANCRDAPWRVSTAKI 313 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 D +AP +G MLP PL HL++Q L P+++TSGNLS +P I N+ A L IAD Sbjct: 314 ADSVAPGQTTLGFMLPYTPLHHLIMQRLDYPIILTSGNLSDEPQCIDNQDASLKLGKIAD 373 Query: 347 GFLIHNRDIVQRMDDSVVRESG-------------------------------------- 368 L+HNRDIV R+DDSVVR Sbjct: 374 YLLLHNRDIVNRVDDSVVRVIQSKRQLQNFDGGGFSHIRVTKNDNCETRPYRGTMARHIH 433 Query: 369 -EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGI 427 + LRR+RGY P + LPPGF+ PP+L +G++LKNTFCL+R QA+LSQHLGDL + Sbjct: 434 IQTLRRARGYAPKPINLPPGFEKCPPILAMGSELKNTFCLLRDGQAILSQHLGDLENAAA 493 Query: 428 QMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAAC 483 +++ L L N++D P + D HP Y+S++ +E+ +L + HHHAH AAC Sbjct: 494 FNAYQDTLNLYLNLFDHKPSAIATDKHPEYLSTKLGQELATANHLSLHPIQHHHAHIAAC 553 Query: 484 LAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAA 543 LAE+ PL+ ++ + LDG+G GE+G +WGGE L +Y+ + LG +A+ GG+ A Sbjct: 554 LAENNIPLNTPPILGIALDGLGYGEDGTIWGGEFLLADYQGFKRLGKFKPIAMIGGEQAI 613 Query: 544 KQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 QPWRN A + E+ + + Q+ +L + IE+GIN+PLASS GR Sbjct: 614 YQPWRNTYAHLIAAWDWNKLKQEYSDLDLIQFLDQKPHPLLNQLIEKGINSPLASSVGRL 673 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASC------HGVTHPVTMPRVDNQ----LDL 647 FDAVAAALG A SYEG+AA +EAL +P + ++D + LD Sbjct: 674 FDAVAAALGICRADCSYEGQAAIEMEALVTPDSLNYVKEVGAYPFNIGKLDQETELILDP 733 Query: 648 ATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 W L+ + A FH LA A ++++ ++ +GGV NR+L Sbjct: 734 YPLWLALLDDLQQDVSKSLIAAKFHQGLADAIATMVQQLRPDLISNQVILTGGVFQNRIL 793 Query: 705 RARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 ++ L +L +P DGGLSLGQ VIAAA+ L+ Sbjct: 794 LTQVRENLERMGMEVLTHSRVPPNDGGLSLGQAVIAAAQSLSYR 837 >UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Hydrogenothermaceae RepID=C0QP96_PERMH Length = 747 Score = 1006 bits (2603), Expect = 0.0, Method: Composition-based stats. Identities = 290/753 (38%), Positives = 405/753 (53%), Gaps = 37/753 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHC 65 +++ + G VQGVGFRPFV+ A + NL G V ND GV + + D FL+ L Sbjct: 5 LKIHLTGAVQGVGFRPFVYNTALRHNLKGYVINDTHGVVIEVEGEEDDINRFLISLNTEK 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRY 124 PPLA I S E E S EFTI++S I+PD + C CL+EMN +RRY Sbjct: 65 PPLAHIFSQEIEELPLSGFE-EFTIKKSESKGKKEVFILPDISVCDQCLSEMNNKKDRRY 123 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPRF+II +PYDRP T M F +CP C++EY+DP DRRFHAQP ACP C Sbjct: 124 RYPFINCTNCGPRFSIIERLPYDRPNTTMKKFRMCPDCEREYKDPSDRRFHAQPNACPVC 183 Query: 185 GPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GPHL S AE+E AL+ A+ L GKI+A+KGIGGFHL CDA + A+ LR R Sbjct: 184 GPHLSLYSSDRKFIAEREEALKIAVELLGKGKILAVKGIGGFHLVCDATDDKAIDLLRER 243 Query: 243 KHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K R KP AVM D + D ++ +P PIV+V K L +AP L+ Sbjct: 244 KRRGEKPFAVMFRDIDQIKDYAEITPFEEAVILSPERPIVIVRSKKETGLSKGVAPYLDR 303 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GV LP +PL HLLL + PLVMTS NLS +P N++A L D L+HNRDI Sbjct: 304 IGVFLPYSPLHHLLLNDYGKPLVMTSANLSDEPIVKDNDEAFEKLSVFTDYILVHNRDIR 363 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R+DDSVVR + +RRSRGY P + LP + VL +G KNT + ++A Sbjct: 364 NRVDDSVVRIIDKKISFIRRSRGYAPLPVKLPLRLE--RKVLAVGGHQKNTIAIGFDDKA 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLP 469 LSQH+GDL + E + ++Y F P VV D HP Y S++WA + ++P Sbjct: 422 FLSQHIGDLETLDACRNFEEIINRFFDLYSFQPDVVVSDMHPAYHSTRWAEDYTEKNSIP 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AHA + +AE G ++++ DG G G +G +WGGE L +Y + E + Sbjct: 482 LIQVQHHYAHALSLMAESGIR--EGKFLSVSWDGTGYGTDGNIWGGEFLLCDYEDFERVY 539 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVP----EWQNYSETASVQQQNWSVLARAIERG 585 L GG+ A K+P R L+ S+ + ++ R E+G Sbjct: 540 HFDYFRLLGGEKAVKEPRRVALSILFDMYGKDIYRLSEVQTLKSLTDKEMEIMFRVWEKG 599 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +N+PL+SS GR FDA A+ +G TLSYEG++ +E +PV + D + Sbjct: 600 VNSPLSSSAGRLFDAAASIIGIR-QTLSYEGQSGMIMENYYRWDIEDHYPVDLR--DGVI 656 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D + +N ++ ++ + F ++L + ++ E + + +GGV NR L Sbjct: 657 DWRPLFDALINDRSEIDIKITRFINSLGKVVLRIVDEYSDI----PSGLTGGVFQNRFLT 712 Query: 706 ARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 ++ + + +P DGG+SLGQ + Sbjct: 713 EKILRMAEKRGLKIFTHKKVPPNDGGISLGQLL 745 >UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Thermoanaerobacterales RepID=B7R9R7_9THEO Length = 751 Score = 1005 bits (2599), Expect = 0.0, Method: Composition-based stats. Identities = 296/756 (39%), Positives = 413/756 (54%), Gaps = 31/756 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 Q+ I G VQGVGFRPFV+ +AQ+ NL G V N+ G+ + + D E F+ ++ + Sbjct: 10 QARQINIFGIVQGVGFRPFVFNIAQKYNLKGIVYNNSSGLYIEVEGEEKDIEAFIREIKE 69 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 + P L+ ID ++ + +F I S + PD C CL E+ P +RR Sbjct: 70 NPPSLSVIDEIQVREVEVKE-YKDFKIVGSKEDGGFVPVSPDMGVCEDCLRELKDPKDRR 128 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT+CGPRF+II +PYDR T M FP+C C +EY DP DRRFHAQPVAC + Sbjct: 129 YRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFD 188 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L +V G + ++ LK GKIVAIKGIGGFHLA +A + AVATLR RK Sbjct: 189 CGPSLSFVGEGCF---DDEIKCVAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRRRK 245 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP AVM+ + + +LL + PIVL+ KK +L IA DL+ + Sbjct: 246 KRYGKPFAVMMRDVEEVKKYCIVSPEEERLLLSQRRPIVLLKKKGE-KLAKGIADDLDTL 304 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVMLP P+ +LL++E+ P+VMTSGN+S +P NE+AL L+ IAD FL++NRDIV Sbjct: 305 GVMLPYAPIHYLLMEEIDFPIVMTSGNVSEEPICKDNEEALEKLKDIADVFLLNNRDIVN 364 Query: 358 RMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R+DDSV + ++RR+RGY P + L K +L +G KNTFC+ +G A Sbjct: 365 RIDDSVTSFNAGAERIIRRARGYAPQPILLKKEVKA--SILAVGGFYKNTFCMTKGHYAF 422 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 +S H+GDL ++ + E + + ++ P+ V HD H GY+S+Q+A+ ++LP V Sbjct: 423 ISHHIGDLDNEKAFNYYIEQIERYKKLFRVDPEVVAHDMHKGYLSTQYAKSLDLPKIEVQ 482 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HHHAH A+C+AEH VI + DG G G +G +WG E L + + E + L Sbjct: 483 HHHAHIASCMAEHNLD---EKVIGIAYDGTGYGTDGNVWGAEILVCDLKSFERIAHLKYK 539 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSC 594 LPG +LA K+ +R L + ++N+ E V + ++ + I+R IN SS Sbjct: 540 PLPGNELAIKKIYRTALGFIFDNISFYKNFVE--QVDSRELDIILKQIDRKINTAYVSSM 597 Query: 595 GRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW 654 GRFFDAVAA +G L +EG+AA LE+L A + +D +Q Sbjct: 598 GRFFDAVAALIGVRKEVL-FEGQAAMELESLMAESEEYYEYEILKEDGYVIDPELILRQI 656 Query: 655 LNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + + FH+ + L GI +V SGG NR L RL Sbjct: 657 YEDYMKGFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLIEK 716 Query: 712 --LADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L+ F + +P DGG+SLGQ VIA + L G Sbjct: 717 LSLSGFEVYSNSKVPCNDGGISLGQAVIA-NKILEG 751 >UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Chroococcales RepID=C7QNJ8_CYAP0 Length = 780 Score = 1004 bits (2597), Expect = 0.0, Method: Composition-based stats. Identities = 296/785 (37%), Positives = 413/785 (52%), Gaps = 53/785 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLY 62 ++L I G VQGVGFRPF+++LA +L L G V N GV + + E+ E FL+++ Sbjct: 3 KKRLKLVISGAVQGVGFRPFIYRLATELKLTGWVNNSASGVFIEVEGSLENLENFLLKIP 62 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PP ++I S+E ++ F IR S G ++PD ATC CL E+ P R Sbjct: 63 TEKPPRSQIQSIETT-WLDCIGYNSFEIRYSVSGEKTAIVLPDLATCSDCLNEIFDPNNR 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPF NCT+CGPR++II A+PYDR T M F +C C +EY +P DRRFHAQP ACP Sbjct: 122 RYGYPFTNCTNCGPRYSIIEALPYDRSQTTMKGFMMCCECQQEYENPRDRRFHAQPNACP 181 Query: 183 ECGPHLE-WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP L W +HGE A Q AL+ A +K GKI+AIKG+GGFHL D N AV LR Sbjct: 182 CCGPQLALWNAHGEVLANQNLALKMAANAIKEGKILAIKGLGGFHLMVDGSNHTAVEELR 241 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVP-ELCDDIAPD 293 RK RP KP A+M P D + QLLT+P APIVL+ +K L +AP+ Sbjct: 242 QRKRRPHKPFALMYPSLDSAKSHCEISLLEEQLLTSPEAPIVLLKRKPHTINLWPFVAPN 301 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 GVMLP PL HLLL +L PLV TSGNLS +P I +AL L IAD FL+HNR Sbjct: 302 NPYWGVMLPYTPLHHLLLSDLNFPLVATSGNLSDEPICIEEGEALQRLSPIADLFLVHNR 361 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKN------------------VP 392 I++ +DDSVVR G +LRR+RGY P + + P Sbjct: 362 PILRPVDDSVVRIMGGREMILRRARGYAPFPIMKSESRRKKLISLPTLPLTPSPPHPLSP 421 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 +L G LKNT ++R Q +SQH+GDLS + + + ++ +YDF PQ +V D Sbjct: 422 SLLATGGHLKNTVAILRDNQVFISQHIGDLSTSEALGAFYQVMDSLKGLYDFEPQIIVCD 481 Query: 453 AHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 AHP Y+SSQ+A+ +LP V HH+AH +C+ E V+ + DG G G++G + Sbjct: 482 AHPDYLSSQFAQSQSLPVIKVQHHYAHILSCMTEQGVK---SPVLGVAWDGTGYGDDGTI 538 Query: 513 WGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF---VPEWQNYSETAS 569 WGGE L + + + LPGGD A K+P R LA + +N Sbjct: 539 WGGEFLLITEGNYQRVAHFQPFKLPGGDRAVKEPRRIALALIYQIFESFDGLENLPLFDH 598 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 + +++ + + R +N P+ SS GR FD VA+ LG +S+EG+ A ALE + Sbjct: 599 FSIRELNLIKQMLSRNLNTPITSSVGRLFDGVASLLGIC-QDISFEGQGAIALEYVIGDL 657 Query: 630 H-GVTHPVTM--PRVDNQLDLATFWQQWLNWQAP---VNQRAWAFHDALAQGFAALMREQ 683 +P + + ++ + + L + + FH+ L + + + Sbjct: 658 QTNAIYPYEILEETLPLVINWESIVRGILADLLDNLKPGEISAKFHNTLVEIIINIAEKI 717 Query: 684 ATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + ++ +GG N+ L R L +FT ++ Q +P DGG+SLGQ + A R Sbjct: 718 SQ----KKVIVTGGCFQNKYLTERAIKRLIQENFTPVWHQKVPPNDGGISLGQIMAAVTR 773 Query: 742 WLAGE 746 G Sbjct: 774 LELGR 778 >UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1S1_HALOH Length = 751 Score = 987 bits (2553), Expect = 0.0, Method: Composition-based stats. Identities = 284/761 (37%), Positives = 405/761 (53%), Gaps = 32/761 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 +QL I G VQGVGFRPF+++LA++ NL+G V N GV V + + E F+ Q+ Sbjct: 2 KKRRLQLEIEGIVQGVGFRPFIYRLARENNLNGWVLNTSGGVLVEVEGNQKTLEMFIRQI 61 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPG 120 + PPLA+I +++ + + F I+ S Q+ PD A C CL ++ P Sbjct: 62 DEESPPLAQITTIKSREVSVRE-DSSFVIKDSRKTYYTQVQLPPDIAICNDCLHDIMDPT 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRYRYPF +C +CGPRF II+++PYDRP T M F +CP C+ EY +PLDRRFHAQP A Sbjct: 121 NRRYRYPFTSCVNCGPRFKIIKSLPYDRPRTTMKKFKMCPECNTEYNNPLDRRFHAQPNA 180 Query: 181 CPECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP CGP L GE + I LK G I+AIKGIGGFHL CDA S+ +A L Sbjct: 181 CPLCGPQLWLKKMSGEKCLTRDPIGLTIDLLKKGNIIAIKGIGGFHLMCDATESDVIANL 240 Query: 240 RARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RK RP KPLA+M+ + ++LT PIVL+DKK +L +IAP Sbjct: 241 RTRKRRPDKPLALMMNKLTTVRKYCNVGSMEEEILTGIRRPIVLLDKKGE-KLPRNIAPG 299 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + GVMLP PL +LL + L+ TSGN+SG P N +L+GIAD L HNR Sbjct: 300 IRYYGVMLPYTPLHYLLFDKGIEVLIATSGNVSGNPLEYQNGGVFENLKGIADYVLGHNR 359 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +I +DDSVVR G ++RR+RGYVP L + L LG D KNTFC R Sbjct: 360 EIYVPVDDSVVRVVGGKKRVIRRARGYVPQPLMVGGLDNG----LALGGDQKNTFCFARN 415 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 + A +SQ+LGDL + ++ + + +Y P +VVHD HP Y ++ +A Sbjct: 416 KYAFISQYLGDLGNIDNYNNFKLMIDHFKELYKIKPDFVVHDLHPDYQTTYYASFYG-DK 474 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAH A+C+AE+ VI L DG G+G +G +WGGE L ++++ + G Sbjct: 475 IGVQHHHAHIASCMAENNID---EKVIGLAFDGTGLGNDGNIWGGEFLICDFKDFKRGGH 531 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 L + +PGGD+A K+PWR ++ R + + + + ++ + + +G N P Sbjct: 532 LNYMKMPGGDMAIKEPWRLAVSYLNRLRYDKADIINLLRIDEVEADIILKMLNKGFNCPE 591 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD--NQLDLA 648 SS GR FD VAA +G ++Y+ +AA LE++A + + V++ ++ Sbjct: 592 TSSMGRLFDTVAALIGLR-KRITYQAQAALELESIADNNTEEIYHVSIEEKGQKYVVNTD 650 Query: 649 TFWQQWLNWQAPV---NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 ++ + + FH+ + + R GI ++ SGGV N+LL Sbjct: 651 PMMGGIISDHKKGVKRSIISSKFHNTVIAFTLEMCRLIRHKYGINSVALSGGVFQNKLLL 710 Query: 706 ARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 L L + F + +P D GLSLGQ IA+ R Sbjct: 711 EMLCAGLKEQNFKVYSQAKIPCNDSGLSLGQLAIASNRRKD 751 >UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=A1ASQ9_PELPD Length = 780 Score = 986 bits (2550), Expect = 0.0, Method: Composition-based stats. Identities = 313/763 (41%), Positives = 418/763 (54%), Gaps = 39/763 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 +++ + G VQGVGFRPF+++LA + + G V N GV + + FL + Sbjct: 10 RIRVEVEGIVQGVGFRPFIYRLAARYGISGWVRNTPAGVLLEGEGERSHLSAFLRDISAQ 69 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLA I SV E + F+I S+GG + QI PD C CL E+ P +RRY Sbjct: 70 APPLAAISSVHSETISVT-GEGGFSILPSSGGENSAQISPDCDVCEDCLRELFDPRDRRY 128 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPFINCT+CGPR++II A+PYDR FT M F +C C EY DP +RRFHAQP ACP C Sbjct: 129 LYPFINCTNCGPRYSIITAIPYDRRFTTMERFAMCADCRAEYEDPANRRFHAQPNACPVC 188 Query: 185 GPHLEWVS-------HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 GP + + G L AA+ L+ G ++A+KGIGG+HLA DA N AVA Sbjct: 189 GPRIALLDSSGREVMQGGGGRGHDVLLAAVNLLQRGGVLAVKGIGGYHLAVDACNEEAVA 248 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR RK R KP A+M P + + ++LL P PIVL+ K+ + +A Sbjct: 249 NLRRRKQRDEKPFAIMAPDLARIDSFARCSETEQRLLGGPERPIVLLPKREATPIASLVA 308 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 PD GVMLP+ PL HLLL+ LVMTSGN S +P A + +A L GIAD FL H Sbjct: 309 PDNGYFGVMLPSTPLHHLLLRNNFIALVMTSGNQSDEPIAYRDSEAREQLAGIADLFLAH 368 Query: 352 NRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 +R+I R DDS++R S LRRSRGYVP + LP P VL +G +LK T CL Sbjct: 369 DREIHVRSDDSIIRVFHGSPLFLRRSRGYVPRGIRLPA---EQPSVLAVGGELKATVCLT 425 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-N 467 R ++A LSQH+GDL + E + ++ I + P V HD HP Y+S+ +A ++ + Sbjct: 426 RNDRAFLSQHIGDLKNSATLRSLEECVAHLEKILEIRPALVAHDLHPDYLSTAYAVDLPD 485 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 LP V HHHAH A+C+AE+ G+ I + DG G G +G +WGGE L YRE Sbjct: 486 LPRVAVQHHHAHMASCMAENSLE---GEAIGVIFDGTGYGLDGTVWGGEFLVGGYREFRR 542 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNWSVLARAIER 584 G + VALPGGD A ++P+R L+ S V Q +L R +ER Sbjct: 543 QGHMRLVALPGGDAAVREPYRMALSYLFDAGERDFAALQLSCLGDVSAQERHLLQRMLER 602 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-HGVTHPVTMPRVDN 643 GINAPL SSCGR FDAV+A L + ++YEG+AA LEALA S +P ++ Sbjct: 603 GINAPLTSSCGRLFDAVSALLDVR-SRITYEGQAAIELEALAESAVTDREYPFSVEEFAG 661 Query: 644 Q--LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + LD+ + L P A FH+++A A + G+ +V SGGV Sbjct: 662 RLILDMRPALVELLKDLALGVPRAIMARCFHNSMAAATAGMCERIRCRNGLNRVVLSGGV 721 Query: 699 IHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAA 739 N+LL + LA+ F + + +P GDGGL+LGQ VIA Sbjct: 722 FQNKLLVEGTLNRLAELDFQVFTHRLVPPGDGGLALGQAVIAG 764 >UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Dehalococcoides RepID=Q3ZYW4_DEHSC Length = 763 Score = 985 bits (2547), Expect = 0.0, Method: Composition-based stats. Identities = 287/767 (37%), Positives = 398/767 (51%), Gaps = 36/767 (4%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFL 58 A + + G VQGVGFRPFV+QLA + L+G V N GVE+ + F Sbjct: 3 APKQTKRFAFALSGVVQGVGFRPFVYQLAAKHRLNGWVRNTSAGVEIEAEGAGQALDAFS 62 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMN 117 +L PP + I + ++ + F I+ S + PD ATC C ++ Sbjct: 63 EELTSLNPPQSVIKTFKQTEIPLT-GEEGFEIKPSQSLAGRFQLVSPDIATCTECQKDIF 121 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P RRYRYPF NCT+CGPRFTII +PYDRP T M F +CP C EY +PL+RRFHAQ Sbjct: 122 APRNRRYRYPFTNCTNCGPRFTIIEDIPYDRPLTTMKNFKMCPDCQAEYDNPLNRRFHAQ 181 Query: 178 PVACPECGPHLEWVSHGEHA-EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 P ACP CGP L + A L+ G+I+A++G+GGF LA DA N AV Sbjct: 182 PNACPICGPRLWLADKTGTELSNTDTIAEAAKLLQDGQILAVRGLGGFLLAADATNPQAV 241 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 ATLR RK RP+KP AVML + + LL +PAAPIVL +C + Sbjct: 242 ATLRNRKRRPSKPFAVMLANLEEARKYCSISKEEEHLLVSPAAPIVLCRWNKESPVCPET 301 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP N +G+ML PL HLLL+E+ PLVMTSGNLS +P A N++AL L IAD FL+ Sbjct: 302 APGQNYLGIMLSYTPLHHLLLKEINKPLVMTSGNLSEEPIAKDNDEALKRLCNIADYFLL 361 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I R DDSVV +LRR+RGY P + K VL +G KNTFCL Sbjct: 362 HNRPIYSRYDDSVVMYEAGEKRVLRRARGYAPYPVQTHFKGKE---VLAMGPQEKNTFCL 418 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE-- 465 ++ A +SQH+GD+ + + E L + ++ P+ + D HPGY+++ A E Sbjct: 419 LKDGYAFVSQHIGDMQNPETLDSFEETLAVYLKLFRSKPEIIAADLHPGYIATALAEEWS 478 Query: 466 --MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 +++P V HHHAH A+CLAEH +VI + LDG G G +G +WGGE + Sbjct: 479 DRLDIPLVKVQHHHAHIASCLAEHGCD---DEVIGVALDGTGYGLDGNIWGGEFFCGGIK 535 Query: 524 -ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAI 582 L + LPGG+ A K+P+R ++ + E + + + ++ + Sbjct: 536 QGFSRQAHLEYLPLPGGEAAIKKPYRTAVSYVYTLLGE-EGLGFFKDIDPEKLDIIKSQL 594 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-GVTHPVTMPRV 641 + +N+PL SS GR FDAVAA G +Y+ + A LEA A +P + Sbjct: 595 NKKLNSPLTSSTGRLFDAVAALCGIC-RVANYDSQPAIELEAEAKDTEFAQFYPFELDLD 653 Query: 642 DNQ--LDLATFWQQWLNWQAPVNQRAW---AFHDALAQGFAALMREQATMRGITTLVFSG 696 + L + L+ A+ FH+ ++Q R+ + G+T + SG Sbjct: 654 KGIYLIRLKGILEGVLSNIKSGKTAAYISVKFHNTVSQIVLDTCRKLSAESGLTKVALSG 713 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GV NR L ++ L F +L + +P+ DG +SLGQ VIAA + Sbjct: 714 GVFQNRRLFRQVIQQLETEGFKVLTHKEIPSNDGCISLGQAVIAANQ 760 >UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYI7_CHLT3 Length = 781 Score = 985 bits (2547), Expect = 0.0, Method: Composition-based stats. Identities = 302/770 (39%), Positives = 411/770 (53%), Gaps = 34/770 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 + + ++ ++G VQGVGFRPFV+ LA+ L G V N GVE+ + + F Sbjct: 20 LTAEKNERRKVLVKGIVQGVGFRPFVYNLAESKGLSGFVTNSAAGVEIEVEGKSAELSAF 79 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEM 116 L +L PPLA I + E + + F I S G T I PD A C CL E+ Sbjct: 80 LRELENFAPPLASITEMRVEKIPA-KGASGFKILASKQGEKIATLISPDVALCGDCLKEL 138 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RRYRYPFINCT+CGPR+TII +PYDRP T M FPLC CD+EY P +RRFHA Sbjct: 139 LDPSDRRYRYPFINCTNCGPRYTIIDNIPYDRPNTSMKHFPLCSDCDREYHAPENRRFHA 198 Query: 177 QPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 QP ACP+CGP L + + LK+G IVAIKG+GGFHLACDA N A Sbjct: 199 QPNACPDCGPKLSLHKPDRSEILTADPISEIVRLLKLGHIVAIKGLGGFHLACDAENDEA 258 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 V LRARKHR KPLAVM+ + D + L + +PI+L+ KK L + Sbjct: 259 VKRLRARKHRDEKPLAVMVQDLSSAQKFCQISDEEARALCSAQSPILLL-KKNGTGLPES 317 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IAP +++G++LP P+ HLL+Q VMTS NLS +P AI N++A L IAD FL Sbjct: 318 IAPGNSQLGILLPYTPVHHLLMQSQLQAAVMTSANLSDEPIAIDNDEAFERLGQIADYFL 377 Query: 350 IHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 IHNR+I R DDSV ++RRSRGY P + + VL +G +LKNT C Sbjct: 378 IHNREIYLRCDDSVAAFWAGKLRLIRRSRGYAPRPILVQS---KGETVLAVGGELKNTVC 434 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 L++ QA LSQH+GDL + +++ +Q I++ P+ +VHD HPGY+SS W E Sbjct: 435 LLKENQAFLSQHIGDLENLDAYNHFQKTSAHLQRIFEAKPELLVHDLHPGYLSSHWVSEQ 494 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + + V HHHAH AAC+AEH+ G+VI T+DG G G +G +WGGE N Sbjct: 495 PEMASLAVQHHHAHMAACIAEHRLQ---GEVIGFTMDGTGYGTDGTIWGGEVFIGNECHA 551 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 + LPGGD A K PWR ++ ++ E + + N ++ + R Sbjct: 552 VRFASFEPMPLPGGDAAIKAPWRTGISYLMKSFD--GKLPELPFLPEHNTEMVCDMVRRK 609 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ- 644 N+PL SS GRFFDAVA+ G ++ YEG+AA A + +V + Sbjct: 610 FNSPLTSSAGRFFDAVASICG-EKKSVRYEGQAAIEFMQKADGLDVPPFEIDFGKVGHVR 668 Query: 645 -LDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 + + + ++ + FH L F A+ E + GI T+V SGGV Sbjct: 669 LMMIQPVIVSLVKAIREGESASRLSSRFHKTLVAYFTAMANEARSETGIKTVVLSGGVFQ 728 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 N +L L L F + + +P DGG+SLGQ +I A +L G+ + Sbjct: 729 NYILLEGLVSALLKQGFEVFSHEQVPTNDGGISLGQALIGRA-YLKGDYR 777 >UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 Tax=Desulfotalea psychrophila RepID=Q6AQR7_DESPS Length = 782 Score = 982 bits (2539), Expect = 0.0, Method: Composition-based stats. Identities = 305/783 (38%), Positives = 422/783 (53%), Gaps = 46/783 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQ 63 GV++ IRG VQGVGFRPF++ LA+Q L G VCN GDGV + +E+ E F+ + Sbjct: 2 KGVEIFIRGTVQGVGFRPFIYNLARQHGLSGTVCNTGDGVAIHTSCSKEELEAFIGAVRS 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGER 122 PPL+RI S+E P FTI +S+G + + I PD A C CL+EM P + Sbjct: 62 KAPPLSRIQSIEHGPKEIEIEDGRFTISKSSGTSSADASIPPDIALCADCLSEMQDPNDP 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ YPFINCT+CGPRFTI+ +PYDR T M FP+C AC ++Y DP +RRFHAQP ACP Sbjct: 122 RFAYPFINCTNCGPRFTIVEKIPYDRQQTSMKVFPMCEACTRDYEDPGNRRFHAQPNACP 181 Query: 183 ECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + W G E ++ L L K+VAI+G+GGFHL+C+A AVA LR Sbjct: 182 LCGPQVSWHDQAGNKIETKSPLTDTAVALAANKLVAIRGLGGFHLSCNALEEKAVAQLRE 241 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK RP KPLA+M+ D + + LL++ PIVL+ K+ +L +AP + Sbjct: 242 RKRRPHKPLAIMVQSIDIAKKYCFISEQEIALLSSIEHPIVLLQKRPDTDLAQGLAPHIT 301 Query: 296 EVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 E+G+ML PL HLL QE CP LVMTSGN SG P N +A+ L I D FL+HNR Sbjct: 302 ELGIMLAYTPLHHLLFQESTCPQALVMTSGNSSGTPICTGNAEAIDRLGPIVDNFLLHNR 361 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 DIV R+DDSV R SG+ +LRR+RGYVP + +P + G LK+TFCL + Sbjct: 362 DIVTRIDDSVTRVSGKKPLILRRARGYVPSPIHCKW---TLPATIGCGGGLKSTFCLGKK 418 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 SQH+GDLS+ ++E++ ++ ++D P+ V D HP Y+S+ +A+ + +P Sbjct: 419 NSLFTSQHIGDLSNLESYDFFQESIEHLKKVFDIEPEIAVCDLHPDYLSTHYAKALGIPL 478 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAHA A +AEH VIA+ LDG G G++G WGGE L+ + L Sbjct: 479 YQVQHHHAHATAVMAEHGLK---DPVIAIILDGTGYGDDGTSWGGEILQADLTSFTRLAH 535 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS----ETASVQQQNWSVLARAIERGI 586 L + LPGGD AA +PWR ++ + + +++ L + Sbjct: 536 LSHLRLPGGDKAATEPWRMGISALHSLYGDGLSDKNIPTALRQIERDKREPLLSMLNNNF 595 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD---- 642 N+PL SSCGR FD V++ LG +SYEG+AA LE A C T + D Sbjct: 596 NSPLTSSCGRLFDTVSSLLGICQK-MSYEGQAAMELEDRARRCLNSTWKNDLISEDYDQF 654 Query: 643 -------------NQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 N L L + + A FH L + AL + T G+ Sbjct: 655 PFLLDDRGITWEINSLQLIKTVLDDIQMGKKTPEIALRFHLLLIKNITALTLQLCTQTGL 714 Query: 690 TTLVFSGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V SGG + N ++ L H +A + +++P DGG+SLGQ + + ++ Sbjct: 715 NQVVLSGGCMQNAIILEGLRHTMATHNISVFTGENIPINDGGISLGQTITGGLQHVSRNS 774 Query: 748 QNG 750 G Sbjct: 775 HEG 777 >UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5I7_9RHOB Length = 773 Score = 968 bits (2504), Expect = 0.0, Method: Composition-based stats. Identities = 337/770 (43%), Positives = 440/770 (57%), Gaps = 35/770 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQL 61 T +RI+G VQGVGFRPFVW LA++ L G V ND DGV + + FL +L Sbjct: 2 TVTATHVRIKGLVQGVGFRPFVWHLAREEGLTGHVLNDADGVLAEIFGAADRQQRFLERL 61 Query: 62 YQHCPPLARIDSVEREPF--IWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTP 119 PPL+ I SVE +S P +F I +S G T IVPDAATCPAC+A++ P Sbjct: 62 RCEAPPLSEIVSVETAVLAGPFSPPPQDFQIVESVEGPATTGIVPDAATCPACVADIFDP 121 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RR+ Y F NCTHCGPR +I+ ++PYDR T MAAF +CP C EY DP DRRFHAQP Sbjct: 122 ANRRHGYAFTNCTHCGPRLSIVTSIPYDRASTSMAAFKMCPECQSEYDDPADRRFHAQPN 181 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 ACP CGP L + G E ++ A ++L G+I+A+KG+GGFHLA DA N AVA L Sbjct: 182 ACPACGPQLWAEAEGTRIETADPIRWAASRLAAGEIIALKGLGGFHLAVDATNDAAVARL 241 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKK----YVPELCDD 289 R +K RP KPLAVM+ + + D L+ AAPIVL+ + P L Sbjct: 242 REKKKRPHKPLAVMVRDLEQARTICHVSDREAALMEDRAAPIVLLRLRAKSAEKPALSGH 301 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +AP L++ G+MLPA PL HLL+ + PLVMTSGN S P I+NE A +L IADGFL Sbjct: 302 LAPGLDQCGLMLPATPLHHLLIAAVPGPLVMTSGNRSEDPQVITNEDARRNLGQIADGFL 361 Query: 350 IHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 +H+R+IV R+DDSV+ R +LRR+RG+ P LAL GF+ P VL +G +LK+TFC Sbjct: 362 MHDREIVNRLDDSVMRADRGGPVILRRARGHAPAPLALNNGFQTCPSVLAMGGELKSTFC 421 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QW 462 +R AV+SQH+GDL + + + L L + +YDF P + D HP +VS+ + Sbjct: 422 QLRQASAVVSQHMGDLESRPVLEDYEKTLTLYRQLYDFEPDRIAVDLHPDFVSTQAGRRL 481 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A ++++P V HHHAH AAC+AEH P D V+ + LDG G+G +G +WGGE L Y Sbjct: 482 AADLHIPLIEVQHHHAHLAACMAEHGLPPDSDPVLGVVLDGSGLGSDGTIWGGEFLFGGY 541 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL-----RFVPEWQNYSETASVQQQNWSV 577 + E G +ALPGG AA++PWRNL+A + P + S + + SV Sbjct: 542 KGFERAGHFLPIALPGGAAAAREPWRNLVAHLRAAFGTDWSPSSASSSLSPIFTGKTVSV 601 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS--CHGVTHP 635 + I+ G+N P+ASS GR FDAVAAALG SYEG+ LEALA +P Sbjct: 602 IEHLIDSGLNTPMASSAGRLFDAVAAALGICATRQSYEGQTGVLLEALARPYLSQATAYP 661 Query: 636 VTMPR-VDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 V + L W+ L + FH L + + + A R I T Sbjct: 662 VDISSGTPGMLSWEVMWEALLGDLKRGTAPGLISARFHLGLIKAISEMATHIAGDRNIRT 721 Query: 692 LVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 + SGGV+ N +L L L F +L P LPA DGGLSLGQ IAA Sbjct: 722 IALSGGVLQNAILAGGLYEQLSAQGFDVLVPGKLPANDGGLSLGQAAIAA 771 >UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Arthrospira RepID=B5VUX7_SPIMA Length = 796 Score = 966 bits (2499), Expect = 0.0, Method: Composition-based stats. Identities = 295/791 (37%), Positives = 412/791 (52%), Gaps = 65/791 (8%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFL 58 + + L IRG VQGVGFRPFV++LA QLNL G V N GV + + E E F Sbjct: 5 SDQNLSRLSLTIRGAVQGVGFRPFVYRLATQLNLKGWVNNSVGGVFIEVEGCSESLERFQ 64 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG---GTMNTQIVPDAATCPACLAE 115 +L PP++ I S+E + + F IR S G + ++PD ATCP CL + Sbjct: 65 QRLQIEKPPISHIHSLEAVWLPLA-GYSHFEIRASQSTIQGAKSAIVLPDLATCPQCLQD 123 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + P RR+RYPF NCT+CGPR++II+ +PYDR T MAAFP+CP CD+EY P DRRFH Sbjct: 124 IFDPHNRRFRYPFTNCTNCGPRYSIIKTLPYDRENTTMAAFPMCPNCDREYHHPGDRRFH 183 Query: 176 AQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQP ACP CGP LE +H A + AL A A + G+IVA+KG+GGF L DA N+ Sbjct: 184 AQPNACPVCGPILELWNHQGQVLANRHHALLQAAAAMGRGQIVAMKGLGGFQLLVDATNA 243 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDK-KYVPEL 286 AV LR RKHRP KP AVM + A Q L +P APIVL+ + L Sbjct: 244 AAVEQLRVRKHRPHKPFAVMYRSIQQIAQVCDISAAEEQWLRSPQAPIVLLSRLPGASAL 303 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 D++AP +GVMLP PL HLL+ EL P+V TSGN S +P +AL L IAD Sbjct: 304 ADNVAPGNPNLGVMLPYTPLHHLLMAELDFPIVATSGNFSNEPICTDQTEALHRLGKIAD 363 Query: 347 GFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNV------------ 391 FL+HNR I + +DDSVVR ++RR+RGY P + + + Sbjct: 364 IFLVHNRPIARPVDDSVVRSVLGEQMVIRRARGYAPLPVTILDRDSHHTTHDSILSQSIS 423 Query: 392 ----PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 P +L +G LKNT + +Q +SQ++G+L ++EA+ + NIYDF P Sbjct: 424 NCQYPYILAVGGHLKNTIAIAVEKQVFISQYIGNLQSPQAFQAFKEAINSLSNIYDFKPD 483 Query: 448 YVVHDAHPGYVSSQWA----------REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 497 + DAHP Y+S+Q+A + +P V HH+AH A +AEHQ V+ Sbjct: 484 VIACDAHPDYISTQFAYQLAADIWQQEKRQVPVIPVQHHYAHVLAVMAEHQLSF---PVL 540 Query: 498 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF 557 + DG G G + +WGGE L +N + +G LPGGD A +P R L Sbjct: 541 GVAWDGTGYGLDETIWGGEFLLINKIGFQRVGHWRNFPLPGGDKAVLEPRRLGLGLLYEL 600 Query: 558 VPE----WQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLS 613 E + N + + ++ + + R +N P SS GR FDA+A +G +S Sbjct: 601 WGEQLWDYLNKQKISLGNFPQLKLILQMLNRKVNTPRTSSVGRLFDAIAFLVG-HRDNIS 659 Query: 614 YEGEAACALE-ALAASCHGVTHPVTMPRVDNQL--DLATFWQQWL---NWQAPVNQRAWA 667 +EG+AA LE A+ +P+ + + ++ D +Q L N PV+ + Sbjct: 660 FEGQAAMDLEFAIGDVITDEHYPINLHQSSGKIILDWEPMVKQVLKDFNNHVPVSLISAK 719 Query: 668 FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPA 725 FH+ L +G + ++ + LV +GG NR L + L + + + +P Sbjct: 720 FHNTLIEGIIMVSQKFPEV----PLVLTGGCFQNRYLLEKTIQRLTSEGIIHYWSKQVPT 775 Query: 726 GDGGLSLGQGV 736 DGGL+LGQ + Sbjct: 776 NDGGLALGQVM 786 >UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Dictyoglomus RepID=B5YB71_DICT6 Length = 742 Score = 964 bits (2492), Expect = 0.0, Method: Composition-based stats. Identities = 276/753 (36%), Positives = 394/753 (52%), Gaps = 35/753 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 +LR+ G VQGVGFRPF+++LA+ LNL G + N V++ ++ D E F+ L + Sbjct: 2 KSYKLRVWGIVQGVGFRPFIYRLAKSLNLRGWILNSTGSVQILIQGEEKDLEKFMELLLK 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPL+R + I + ++F I +S I PD A C CL EM P +RR Sbjct: 62 EAPPLSR-IEGIEKEEIEVEEISDFKILESKEDIGFNFISPDIAICEDCLREMRDPKDRR 120 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCT+CGPR+TII +PYDR T M F +C C KEY DP RRFHAQP++C Sbjct: 121 YNYPFINCTNCGPRYTIIEDLPYDRDKTTMKIFEMCEECYKEYHDPSSRRFHAQPISCYN 180 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + E + + L GKI+AIKGIGGFHLACDA + V LR RK Sbjct: 181 CGPQIWIY----GEESKDLFKRISEYLDEGKILAIKGIGGFHLACDATQDDTVRKLRERK 236 Query: 244 HRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP+KP A+M+ + + + ++L + +PIVL+ K + ++ +AP N + Sbjct: 237 KRPSKPFALMMKDIETIKEYCFVSEEEEKILKSKQSPIVLLRIKDLKDISPLVAPGNNYL 296 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVMLP P HL+ + PL+MTSGNLS +P NE+A+ L+ IAD F+ HNR+I Sbjct: 297 GVMLPYAPYHHLIFDHFKKPLIMTSGNLSDEPIVKDNEEAMERLKNIADIFVFHNREIKH 356 Query: 358 RMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R+DDSVV +++RR+RGY PD + +P K P L LG +LKNTF L + Sbjct: 357 RIDDSVVFVENKEVQIIRRARGYAPDPVKIPIKLK---PTLALGGELKNTFSLGKENYVF 413 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--LPTQT 472 +S H+GDL D + E ++ ++ P+ +VHD HP Y+S+ A+ + + Sbjct: 414 MSPHIGDLKDKETLEVYEETIQEYIRLFKIEPEILVHDLHPQYLSTDLAQRFKKYMEVRA 473 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 + HH AH + L + + D+I T DG G GE+G +WGGE N E + + Sbjct: 474 IQHHKAHFYSLLLDREIT---EDIICFTFDGTGYGEDGKVWGGEVFVGNIEEIKRVAHFK 530 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 + GGD+A + P + L+ L+ PE + ++ + +V +ER N S Sbjct: 531 YFPIVGGDIAIENPRKIALSYILKNFPEDTD-KILPNIDELEKNVTKILLEREENVFYTS 589 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 SCGR FD V+A LG + YEG+AA LE A ++ V+N++ Sbjct: 590 SCGRIFDLVSALLGIR-ERIDYEGQAAIELEMHAMESKEESY-YPFRLVENEILEIDILP 647 Query: 653 QWLNWQAPVN-----QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 N A FH+ ++Q AL I + FSGGV NRLL Sbjct: 648 SIEKIIKEKNKKDKRDIARKFHNTVSQIIIALSEIFREEYKINKIGFSGGVFQNRLLLET 707 Query: 708 LAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 L + F + Q +P DGG+SLGQ ++ Sbjct: 708 TIPILKERKFEVYTHQKVPTNDGGISLGQMIMG 740 >UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVY1_SYNAS Length = 778 Score = 962 bits (2488), Expect = 0.0, Method: Composition-based stats. Identities = 293/756 (38%), Positives = 406/756 (53%), Gaps = 34/756 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQL 61 V+ G VQGVGFRP+++++A +L G VCN +GV + E FL + Sbjct: 16 KIRRVRCLFTGIVQGVGFRPYIYRMATNYSLGGFVCNIPEGVVAEVEGTAPQIEAFLSAV 75 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPG 120 + PP A + ++ TEF I S G I PD A C CL E PG Sbjct: 76 PKELPPAAALTALSNTDVSLL-GETEFQIISSRAEGNKAVLIAPDIAVCENCLREFRDPG 134 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPFINCT CGPR TIIR +PYDR T MA FPLCP C EY +P +RRFHA+P A Sbjct: 135 DRRYRYPFINCTDCGPRLTIIRDVPYDREKTSMACFPLCPQCRAEYENPANRRFHAEPNA 194 Query: 181 CPECGPHLEWVSHGEHAEQEA---ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 CP CGP L + + AI L GKI+A+KG+GGFHLA DA + AV Sbjct: 195 CPSCGPKLWLTDENGTPFSDDFNDPIAKAIELLSKGKILAVKGLGGFHLAVDATDEGAVR 254 Query: 238 TLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR+RK+R KPLAVM+ + + D R+LL +P PIVL K+ E+ +A Sbjct: 255 RLRSRKYREEKPLAVMVRDLEAASKIAEIGDRERKLLFSPQRPIVLCRKRGAKEIAPSVA 314 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P + + G+MLP PL +LLL+ LVMTS N S +P I N +AL L+GIAD +L+H Sbjct: 315 PGVPDRGIMLPYTPLHYLLLENTLSALVMTSANQSDEPICIGNREALKRLKGIADAYLLH 374 Query: 352 NRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 NRDI+ R DDSV + M+RRSRGY P + L ++ P VL LG LK T C++ Sbjct: 375 NRDILVRCDDSVATVTQGKTFMIRRSRGYAPKPIPL---LRSCPNVLALGPQLKTTLCIL 431 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-N 467 +G A LS H+GD+ + +E+L+LM+ I P + D HP Y +++ A E+ + Sbjct: 432 KGNLAYLSPHIGDMDTPEARKFHQESLQLMERIAQCRPDVLACDLHPAYYTTRLAEELPH 491 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 + HHHAH + +AE+ G VI L +DG G G +G WG E L + + + Sbjct: 492 RTVLRIQHHHAHIVSAMAENGLT---GKVIGLAMDGTGYGTDGTAWGCEFLLADEVDFQR 548 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE-WQNYSETASVQQ--QNWSVLARAIER 584 G L LPG D A ++PWR ++ E W+ + ++ ++ +L + + Sbjct: 549 AGHLRPYPLPGSDRAVREPWRAAVSLLRESYGEFWREIAGNLPLKDHAPHFELLDKMMAH 608 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN- 643 G+N+P SS GR FDAVAA LG +++EG+AA ALEA+A++ T+ + D Sbjct: 609 GLNSPPTSSLGRVFDAVAALLGIR-QVVNFEGQAAMALEAMASAPAEKTYTFDIFEGDRI 667 Query: 644 QLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 LDL + + Q + A FH L++ AA+ + GI V SGG Sbjct: 668 VLDLRPLIRAIVQEQLSGREPQKIASDFHRTLSRALAAVTAKIRMRTGIEKAVLSGGCFQ 727 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 NR+L +A L F + + LP DG ++LGQ Sbjct: 728 NRILLDSVARELEQEGFAVYLHRDLPPNDGCIALGQ 763 >UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QQX5_9BACI Length = 758 Score = 961 bits (2485), Expect = 0.0, Method: Composition-based stats. Identities = 297/762 (38%), Positives = 407/762 (53%), Gaps = 35/762 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 +++ ++G+VQGVGFRPFV+QLA + ++ G V N+ DGV V + ++FL+ L Sbjct: 2 QKSIKVTVKGRVQGVGFRPFVFQLAHRYHIKGTVQNNMDGVTVFAEGEEKELQSFLLSLQ 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGE 121 P L+RID ++ + F+I +S ++ ++P D A C CL EMN P Sbjct: 62 TEAPRLSRIDQLDVMEADYQGFEQ-FSIIESERKGASSLVIPIDTAVCDDCLQEMNDPNN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RYRYPFINCT CGPR+TII +PYDRP+T M +F +C C KEY DPL+RR HAQP+AC Sbjct: 121 HRYRYPFINCTQCGPRYTIIEQLPYDRPYTSMKSFSMCEHCQKEYEDPLNRRHHAQPIAC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 P CGPH+ V A+ A L G IVAIKG+GG+HLACDA N AV LR Sbjct: 181 PVCGPHVALVDRNGRTLDGDAIDKAKQLLLSGAIVAIKGLGGYHLACDATNEQAVQQLRT 240 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK RP +PLAVM + D +++LT+P APIV++ +K L +AP L Sbjct: 241 RKQRPTRPLAVMAASLSVVKQMCEVNDEEKRVLTSPEAPIVVLKRKTTYPLAPSLAPGLK 300 Query: 296 EVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 VGVMLP PL HLLL E P LVMTS N SG P +EQAL DL+ IAD FL+HNR Sbjct: 301 TVGVMLPYTPLHHLLLDEEHIPVLVMTSANRSGVPILYKDEQALQDLKSIADYFLVHNRP 360 Query: 355 IVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV +DDSVV+ + + LRR+RG+VPD +V + LG KN F R E Sbjct: 361 IVHPIDDSVVQIQNGNVDFLRRARGFVPDPFFTTS---DVHEIAALGGQQKNVFAFGRNE 417 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 Q L H+GDL + ++ ++ P+ V D HP Y + +E ++ Sbjct: 418 QIFLGPHIGDLQNMESIEHFQREYEHLRTWMGVEPKAVAVDMHPNYETWNIVKEWDVSVI 477 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH +C+ ++ L LDG G GE+G +WG E L + + LG L Sbjct: 478 PVQHHHAHMVSCMEDNGIK---NSCFGLILDGTGYGEDGHIWGFELLYGDASHYKRLGHL 534 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSETASVQQQNWSVLARAIERGINAP 589 LP G+ K+PWR + ++ E ++ E +Q +L + +E+ I+AP Sbjct: 535 TYTPLPSGERCIKEPWRTAVGMLGYYLGEKGYKLAIERFPDKQYEIHILKQMVEKDIHAP 594 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QLD 646 A +CGR FDAV+A L + +YEGEAA L L H + P +N ++D Sbjct: 595 KAGTCGRLFDAVSAFLHVCTHS-TYEGEAAIRLAELVDEGH-IYEPYPFELKENNIMEID 652 Query: 647 LATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITT--LVFSGGVIHN 701 +A W V A FH + A++R+ +V SGG +HN Sbjct: 653 VAAMWVAIAEDVKRNINVETIAGRFHQTVVSAAIAMIRKAVEEHPQYHREIVLSGGSMHN 712 Query: 702 RLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 R L L L F + +++P DGGL+LGQ +IAA R Sbjct: 713 RYLVKHLTTNLRRLGFNVYTHRNVPCSDGGLALGQLIIAANR 754 >UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridium RepID=B8I6F2_CLOCE Length = 790 Score = 959 bits (2481), Expect = 0.0, Method: Composition-based stats. Identities = 285/782 (36%), Positives = 411/782 (52%), Gaps = 50/782 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 G ++ I G VQGVGFRPF++ LA++ + G V N V + + D + F+ ++ + Sbjct: 3 GYRIIITGIVQGVGFRPFIFNLAERFGMKGWVGNTDSNVIIEIDSDFQKVVDFINEIKKS 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 P L+RI S+E + ++ Q F IR S I PD ATC CL EM +RR Sbjct: 63 APVLSRIKSIEYKDIVY-QGFKNFEIRHSQKNSKGPVFISPDVATCCDCLREMKDKSDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT+CGPRFTII+ +PYDR T M F +C C +EY P DRR+H QPV+C E Sbjct: 122 YRYPFINCTNCGPRFTIIKNIPYDRDNTTMKYFEMCENCRQEYTKPSDRRYHTQPVSCHE 181 Query: 184 CGPHLEWVSHGEHAEQE-----AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CGPHL +E + +K G IVA+KGIGG+HLACD N AV Sbjct: 182 CGPHLSIADETGKIMREIQSSRECITFTADLVKKGNIVAVKGIGGYHLACDGLNKKAVDR 241 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RKHR KP AVM + + +LT+ A+PIVL++KK L + +A Sbjct: 242 LRTRKHRDDKPFAVMAKDLRTAEKYCKINYVEKNILTSTASPIVLLEKKDGVILPESLAH 301 Query: 293 DLNEVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 +GVMLP P+ HLL +E P LVMTSGNLS +P +E+A+ LQGIAD +L Sbjct: 302 LNRYLGVMLPYTPVHHLLFEEKGFPELLVMTSGNLSNEPIFYKDEEAVEGLQGIADAYLT 361 Query: 351 HNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALP-------PGFKNVPPVLCLGAD 400 +NR+I R DDSV R ++RR+RG+VP+ +++ +P VL G + Sbjct: 362 NNREIYIRTDDSVTRVFNAKEYIIRRARGHVPNPVSINVHELLDMDKTIEIPSVLACGGE 421 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 LKN FCL +G+ LS H+GDL ++ + +R + + ++D +PQ + +D HP Y SS Sbjct: 422 LKNVFCLNKGKNFYLSHHIGDLENESTNIAFRNGIEHFKRLFDISPQLIAYDLHPNYYSS 481 Query: 461 QWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 Q+A ++ + ++ HH AH A+C+AE++ GDVI ++ DG G GE+G +WGGE Sbjct: 482 QYALKQRYVEKVSIQHHKAHIASCMAENKLK---GDVIGVSFDGTGYGEDGNIWGGEFFT 538 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN--------YSETASVQ 571 Y G L V +PG D A + PWR L+ V + Sbjct: 539 GGYYGFRRAGHLAYVMMPGSDSAVRHPWRMALSYLYASVQGVPDKVMEITNKLPAFMDRS 598 Query: 572 QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG 631 ++ + +E+ IN+P SS GRFFDAV+A LG +SYEG+AA LE A Sbjct: 599 KEEIIFTIKMLEKRINSPFTSSMGRFFDAVSALLGI-KTNISYEGQAAIELEYYADLSCT 657 Query: 632 VTHPVTMPRVDNQ----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQA 684 + + + + ++ +Q ++ + + FH +A Sbjct: 658 DPYLFDIEKTVFEESFTINTGCTIKQIVDDILAGKGLGYISSRFHTTIAHIVLEGCLNIR 717 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 + +G+ +V SGGV N L L F + +P+ DGG+SLGQ ++A A+ Sbjct: 718 SRKGLKNVVLSGGVFQNITLLKMTVDSLEKQGFKVFIHSEVPSNDGGISLGQSIMAIAQM 777 Query: 743 LA 744 + Sbjct: 778 IK 779 >UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 Tax=Desulfovibrionales RepID=Q726N9_DESVH Length = 839 Score = 959 bits (2479), Expect = 0.0, Method: Composition-based stats. Identities = 311/786 (39%), Positives = 421/786 (53%), Gaps = 54/786 (6%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQ 60 T + + G+VQGVGFRPFV+++A L G V N +GV + ++ E E F Sbjct: 56 PTPLRRRFVVSGQVQGVGFRPFVFRIATGHALTGTVSNTSEGVFIEVQGPHEAVEAFGDD 115 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTP 119 L PPLA++ S E E T+F I S+GG + I PD A C CLA+M P Sbjct: 116 LVGKLPPLAQVVSCEHEDLPLVAGETDFIIVASSGGHGHQVLISPDMAVCDDCLADMRDP 175 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRYRYPF NCT+CGPR+TI R++PYDR T MA FPLCPAC EY DP+DRRFHAQP Sbjct: 176 AGRRYRYPFTNCTNCGPRYTITRSIPYDRDKTSMACFPLCPACRAEYEDPMDRRFHAQPN 235 Query: 180 ACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 ACP CGP L + AE + A+ L G+I AIKG+GGFHLACDA + AV Sbjct: 236 ACPVCGPRLWLTARDGTTLAEGDYAITVTAHVLNTGRIAAIKGLGGFHLACDATDDAAVT 295 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 TLR RK RP KPLAVM+P D + +L+ + PIVL + L ++ Sbjct: 296 TLRERKRRPHKPLAVMVPDMDTVRRIAAPTPDEERLILSQERPIVLCRARDDGPLASAVS 355 Query: 292 PDLNEVGVMLPANPLQHLLLQELQ-------------------CPLVMTSGNLSGKPPAI 332 PD + VGVMLP PL H+L L C LVMTSGN S +P + Sbjct: 356 PDTDHVGVMLPYTPLHHVLFDTLADLRREGGTSSRRTPSASDVCALVMTSGNASNEPICL 415 Query: 333 SNEQALADLQGIADGFLIHNRDIVQRMDDSVVR-----ESGEMLRRSRGYVPDALALPPG 387 N ++L L IAD FL+H+RDI+ R DDSVVR + +RR+RG+VP + LP Sbjct: 416 GNRESLRRLAHIADAFLLHDRDILIRTDDSVVRAVQGEDGPLFMRRARGFVPRPVRLP-- 473 Query: 388 FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 + P VL G +LKNT C+ R + A +SQH+GD+ + +RE + +I P+ Sbjct: 474 -DSGPCVLATGPELKNTLCITRNDMAFVSQHIGDMHNLETLGFFREIAAHLADILQVEPE 532 Query: 448 YVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 VV D HP Y++++WA + LP + HH+AHA + LAE+ G + +TLDG G G Sbjct: 533 AVVRDLHPDYMTTRWAEDCGLPVLALQHHYAHAYSVLAENGHE---GPALCVTLDGTGYG 589 Query: 508 ENGALWGGECLRVNYREC--EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS 565 ++G +WGGE L V+ E E L + LPGG+ A ++PWR R + Sbjct: 590 DDGTIWGGEFLYVDSLELEHERLAHFSRLPLPGGETAIREPWRIAQGALWRLGMFEPDSR 649 Query: 566 --ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE 623 +++ ++ +++G+N P+ASSCGR FDAV+A LG +++YEG+AA LE Sbjct: 650 VWPWLPHREEASRMVGLMLDKGVNTPMASSCGRLFDAVSAMLGLC-ESITYEGQAAILLE 708 Query: 624 ALAASCHGVTHPVTMPRVDNQLDLAT---FWQQWLNW--QAPVNQRAWAFHDALAQGFAA 678 + +P + + L T F +++W + P A FH L QG A Sbjct: 709 RIQDMSETTPYPCPLKDGVQPMVLDTAQLFLHAYVDWAMETPPGIIARRFHLGLIQGVAD 768 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 L G+TT+ SGGV+ N L A L L L ++LP DG +SLGQ Sbjct: 769 LAASLCGAMGLTTVGLSGGVMQNLTLAAGLPEALRARGLVPLVHRTLPPNDGCISLGQAA 828 Query: 737 IAAARW 742 R Sbjct: 829 WGRRRL 834 >UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, putative n=65 Tax=Gammaproteobacteria RepID=C5B8Z2_EDWI9 Length = 774 Score = 952 bits (2461), Expect = 0.0, Method: Composition-based stats. Identities = 431/758 (56%), Positives = 511/758 (67%), Gaps = 23/758 (3%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR--EDPETFLVQLYQHC 65 + LRI+GKVQGVGFRP+VWQ+AQ L LHG+V ND GV + +R D +T + +LY C Sbjct: 5 AIALRIKGKVQGVGFRPYVWQIAQTLGLHGEVSNDAGGVWLVVRLPADLDTLIQRLYADC 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA ID++ER P+ + F I S G M+TQIVPDAATCP CLAEM P RRY Sbjct: 65 PPLAHIDTIERHPWAETPAD-GFRIVDSRQGAMDTQIVPDAATCPRCLAEMRDPANRRYG 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCTHCGPRFTIIR MPYDRPFT MA FPLCPAC +EY DP DRRFHAQP AC CG Sbjct: 124 YPFINCTHCGPRFTIIRRMPYDRPFTAMADFPLCPACAREYHDPADRRFHAQPTACALCG 183 Query: 186 PHLEWV--SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P + + E EAA QA L G IVA+KG+GGFHLACDA N A+A LR RK Sbjct: 184 PTMWSCGADGADRREGEAAWQAVTRSLDAGHIVAVKGLGGFHLACDAENDAAIARLRERK 243 Query: 244 HRPAKPLAVMLPVADGLPDAARQ--------LLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RP KPLA+MLP L R LL++PAAPIVLV + +AP L+ Sbjct: 244 RRPGKPLALMLPDLSWLARYCRAAPDAGLQALLSSPAAPIVLVPASDA--VPAQVAPGLD 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 EVGVMLP PL HLL+ + PLVMTSGN SG+PPA+ N QALADL GIAD +L+HNRDI Sbjct: 302 EVGVMLPGTPLHHLLMAHIGRPLVMTSGNASGQPPALDNAQALADLAGIADLWLLHNRDI 361 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 VQR DDS+VR + E MLRR+RGYVPD +ALP F +P V +G DLKNTFCL++ + Sbjct: 362 VQRADDSLVRYAPEGSEMLRRARGYVPDTIALPASFSMLPDVAAVGGDLKNTFCLLQRGR 421 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NL 468 A+LSQHLGDL + IQ Q+ + +L+ Y F+P+ + D HPGY S + A++ L Sbjct: 422 ALLSQHLGDLGEARIQQQFLQTWQLLLQTYQFSPRAIACDRHPGYHSHRLAQQQADVRGL 481 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH AAC+AEH +I L LDGIG GE+G LWGGECLRV+YR L Sbjct: 482 PLIAVQHHHAHLAACMAEHGIAPQDTPLIGLALDGIGYGESGELWGGECLRVDYRGYTRL 541 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 GGLPAVALPGGDLAA+QPWRNLLAQ L FVP+W Y ET +Q +NW +LARAI+R +N Sbjct: 542 GGLPAVALPGGDLAARQPWRNLLAQLLCFVPDWPRYPETQRIQAKNWPLLARAIDRELNC 601 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD-NQLDL 647 P ASSCGR FDA AAAL +S+EGEAAC LEA A PVT+ + +L + Sbjct: 602 PRASSCGRLFDAAAAALDICHEQISFEGEAACRLEAQAWQAWPQETPVTLKIDEQGELAM 661 Query: 648 ATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 FW+ WL+WQ V RA AFH A+A G AAL+R A G TLV SGGV+HNRLLR Sbjct: 662 GDFWRDWLSWQTSVPLRALAFHRAIADGLAALLRYHAEREGCQTLVLSGGVLHNRLLRQL 721 Query: 708 LAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L LAD+ LL P+ LPAGDG L+LGQ +IAA Sbjct: 722 LLARLADYRLLLPERLPAGDGALALGQAIIAAHCLKDA 759 >UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YU2_SOLUE Length = 725 Score = 949 bits (2454), Expect = 0.0, Method: Composition-based stats. Identities = 303/752 (40%), Positives = 401/752 (53%), Gaps = 48/752 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQH 64 +++R++G VQGVGFRPFV+ LA +L L G V ND G+ V +P F+ L Sbjct: 3 RIRIRVQGIVQGVGFRPFVYNLALRLPLAGHVFNDSSGLVVEAEGEPHALAAFVAALRTE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERR 123 PPLA + + T FTI S T + PD ATC CLAE+ P RR Sbjct: 63 HPPLAWVRDLSITELSPIGT-TGFTILPSVAETGKFALVSPDVATCAECLAEIFDPVNRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCT+CGPR+TIIR +PYDRP T MAAF +CP C EY DP DRRFHAQP ACP Sbjct: 122 YRYPFTNCTNCGPRYTIIRDIPYDRPSTTMAAFAMCPLCRAEYEDPADRRFHAQPNACPA 181 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L A + +L G+I+AIKG+GGFHLACDARNS AV LRARK Sbjct: 182 CGPALS-----------AGIPETQRRLAAGEILAIKGLGGFHLACDARNSAAVDALRARK 230 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP A+M+ D + A + LT P PIV++ ++ L +AP + Sbjct: 231 RRSDKPFALMVRDLDAARELCVVDHVAARALTGPRHPIVILLRRDGVPLPGAVAPGNPTL 290 Query: 298 GVMLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 G+MLP PL HLL LVMTSGNLS +P + N A L ++D L+H+RDI Sbjct: 291 GIMLPYTPLHHLLFAGAPFSALVMTSGNLSEEPIVVENADARQRLGPVSDWQLLHDRDIY 350 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVVR + ++RRSRGY P L L + +P +L G +LKNTFCL +G A Sbjct: 351 MRADDSVVRIFEGAERVMRRSRGYAPQTLDL---GRELPELLASGGELKNTFCLTKGTHA 407 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA-REMNLPTQT 472 +LSQH+GDL + + + E L ++ ++ TP+ V +D HPGY+S+++A + + Sbjct: 408 ILSQHVGDLENYETLLFFEETLANLKKLFRVTPRAVAYDLHPGYLSTKFALAQTGIQQIG 467 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HHHAH A+C+AE+ G VI + DG G G +GA+WGGE L Y + E L Sbjct: 468 VQHHHAHIASCMAENHLD---GRVIGVAFDGTGYGLDGAIWGGEFLLAGYADFERRAHLR 524 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 V L GGD A ++PWR+ L E A + + + I G N S Sbjct: 525 YVPLAGGDAAVREPWRSALGYG----------VEVAGIPESRLRAVRSMIATGTNTVPTS 574 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 SCGR FDAVAA +G +++EG+AA LEA+A +P + V ++LD + Sbjct: 575 SCGRLFDAVAAIIGLRHE-VTFEGQAAIELEAIADPTCTTRYPFDI--VGDELDFRPMIE 631 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 + A FH+ LA + + + SGG N L L Sbjct: 632 CIVREHERPPTVAARFHNTLAAAIHEVCVRLRDEAAVNRVCLSGGTFQNMRLLGLTVAQL 691 Query: 713 A--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 F + + +P DGGL+LGQ IAA R Sbjct: 692 RASAFEVYLHREVPPNDGGLALGQAAIAAERL 723 >UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 Tax=Chlorobiaceae RepID=B4S9J1_PROA2 Length = 778 Score = 947 bits (2449), Expect = 0.0, Method: Composition-based stats. Identities = 297/764 (38%), Positives = 416/764 (54%), Gaps = 37/764 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED----PETFLVQL 61 + ++L + G VQGVGFRP+V++LA L L G + N GV + ++ + E F+ +L Sbjct: 17 ARRLRLAVNGIVQGVGFRPYVYRLATSLGLSGSIRNTASGVLIEVQAETPLLLERFVQEL 76 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPG 120 PPLA I SV + F I S G + T I PD A C C +E+ P Sbjct: 77 GSEAPPLAEIFSVVADEIPAQSG-NGFVILSSDDGEDVETLIPPDIALCDDCRSELLDPL 135 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRY FINCT+CGPRF+I+ +PYDRP T M F +C C +EY +PLDRRFHAQP A Sbjct: 136 DRRYRYAFINCTNCGPRFSIVERLPYDRPLTSMKGFTMCEKCGREYGNPLDRRFHAQPNA 195 Query: 181 CPECGPHLEWVSHG-EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP+CGP L+ + G E L A+ +LK G IVA+KG+GGFHLA DA + +AV L Sbjct: 196 CPDCGPALQLLDAGGEPINAPDPLSLALQKLKDGDIVAVKGVGGFHLAVDATDQSAVMNL 255 Query: 240 RARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYVPEL-CDDIAP 292 R RK R KP AVM + D R L + AP+VL+ KK L D+AP Sbjct: 256 RERKGRERKPFAVMARSLGSAEKVAQVSDEERVALRSLQAPVVLMHKKASASLLAPDVAP 315 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +G+MLP +PL L+++E LVMTS N S +P A+ N++A++ LQGIAD FL+HN Sbjct: 316 ANDRIGLMLPYSPLHVLMMEEGPEFLVMTSANSSEEPIALENDEAVSRLQGIADYFLVHN 375 Query: 353 RDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I R DDSV + + +RR RGY P + L + P VL G ++KNT C+++ Sbjct: 376 RPIHLRCDDSVTMVMSGALRQIRRGRGYAPLPVLLSS---DGPSVLAAGGEMKNTVCVLQ 432 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-EMNL 468 G QA+LSQH+GDL + +++ MQ+I+ P+ ++ D HP Y+S+QWA+ + ++ Sbjct: 433 GSQALLSQHIGDLKNYVAYEHFQQVAEHMQHIFQVRPEAIISDMHPSYLSTQWAQNQSDI 492 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH +CLAE+++ G + + LDG G G +G +WGGE L + Sbjct: 493 PVLHVQHHHAHLVSCLAENRFD---GQAVGIILDGTGYGTDGTVWGGEVLIGDASGFFRF 549 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 L V +PGGD AA PW+ + + E A+ + +A + R +NA Sbjct: 550 ASLEPVRMPGGDRAALFPWKAAAGYLFH---TYGHIPEIAAFEGCFVEGIADLLARQVNA 606 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QL 645 P ASSCGR FDAV+A G +SYEG+AA L A G + + L Sbjct: 607 PPASSCGRLFDAVSALCGLCRE-ISYEGQAAIELMHAAGIAEGKPFAWEVVSAGSDRWHL 665 Query: 646 DLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 +A Q L V+ + FH + + F+ + G+T++ SGGV N Sbjct: 666 SVAPMVQDIVTALGSAMSVSDISRRFHVTIVKMFSDIALRACRFSGLTSVALSGGVFQNP 725 Query: 703 LLRARLAH--YLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 L+ L L +L +P+ DGGLSLGQ VI W+ Sbjct: 726 LVFEGLVSDLQLHGIEVLTHSQVPSNDGGLSLGQAVI-GRHWVK 768 >UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 Tax=Nostocaceae RepID=UPI0001C1650F Length = 803 Score = 946 bits (2446), Expect = 0.0, Method: Composition-based stats. Identities = 308/791 (38%), Positives = 422/791 (53%), Gaps = 59/791 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 Q+R+RG VQGVGFRP V++LA+ L GDVCNDGDGV +R+ E F+ QLY CP Sbjct: 5 QIRVRGTVQGVGFRPTVYRLAKNAGLKGDVCNDGDGVLIRIVGSEEKITAFVQQLYDQCP 64 Query: 67 PLARIDSVEREPFIWSQLPT-----EFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 PLA I + R P S EF I S + T+I PDAATC C E+ P Sbjct: 65 PLAHIHELIRSPLYGSNDFHTDELIEFIIAPSMETPVKTEIAPDAATCGECQQEIFDPFS 124 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 R +RYPF NCTHCGPR +I++A+PYDR T M FP+C C++EY D +RRFHAQPVAC Sbjct: 125 RYFRYPFTNCTHCGPRLSIMQAIPYDRNNTSMVDFPMCGECNREYEDVNNRRFHAQPVAC 184 Query: 182 PECGPHLEWVSHGEHAEQEAA------LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 CGP + A L+ G+IVAIKG+GGFHLACDA Sbjct: 185 FRCGPRAWLERADGQPISGDMFSMLDEVDAVCTLLQKGEIVAIKGLGGFHLACDATQETV 244 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPEL--- 286 V LR RK R KP A+M + + D + LLT+PAAPIVL+ L Sbjct: 245 VEKLRQRKKRYHKPFALMARDINIISQYCQISDLEKDLLTSPAAPIVLLKINPQNNLPHN 304 Query: 287 ----------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN-E 335 IAP N +G MLP PL HL+L+ ++ P+V+TSGN++ +P I N + Sbjct: 305 SIKSQIGNPIARAIAPGQNTLGFMLPYTPLHHLILRRMKVPIVLTSGNIADEPQCIDNSD 364 Query: 336 QALADLQGIADGFLIHNRDIVQ---RMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP 392 L IAD FL HNRDI+ VV + ++LRR+RGY P + LPPGF+ P Sbjct: 365 DIKKKLVSIADLFLFHNRDIINRVDDSVVRVVNQKVQILRRARGYAPAPIILPPGFEKTP 424 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 P+L +G +LKNTFCL+R +A+LS+HLGDL + ++E L L N++ P + D Sbjct: 425 PILAMGGELKNTFCLLRSGEAILSEHLGDLENPSAFTNYQETLNLYLNLFAHKPAIIAID 484 Query: 453 AHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 HP Y+SS+ R++ + + HHHAH AACL E++ PL+ V+ + DG+G GE Sbjct: 485 KHPEYLSSKLGRQLAVNNEIELHEIPHHHAHIAACLGENKIPLNSQPVLGVAFDGLGYGE 544 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV------PEWQ 562 + WGGE L +Y C+ L V + GG + QPWRN A + ++ Sbjct: 545 DSTFWGGEFLLADYSNCQRLATFKPVPMIGGKQSIYQPWRNTYAHLNSALNWQEVQEQYP 604 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + +QQQ +L + +E+ IN+PL SS GR FDAVAAA+G +YEG+AA + Sbjct: 605 SLEIVQFLQQQPLKLLDQMVEKNINSPLVSSVGRLFDAVAAAIGICREECTYEGQAAIEM 664 Query: 623 EA-----LAASCHGVTHPVTMPRVDNQ--LDLATFWQQWLNW---QAPVNQRAWAFHDAL 672 E+ + + ++D + A W+ L Q + + A FH L Sbjct: 665 ESSISTEILNDISSYPSHQNIEKLDGMYYIHTAPIWKGILEDINQQVGMGEIAAKFHLTL 724 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGL 730 A ++ + + +GGV NR+L + L +L ++P DGG+ Sbjct: 725 ANLIIETVKLLSREYKTNQVALTGGVFQNRILLQQTTKLLQNMGMEVLTHSNVPPNDGGI 784 Query: 731 SLGQGVIAAAR 741 SLGQ +I AAR Sbjct: 785 SLGQAMIMAAR 795 >UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAG7_VIBHO Length = 794 Score = 945 bits (2444), Expect = 0.0, Method: Composition-based stats. Identities = 330/788 (41%), Positives = 453/788 (57%), Gaps = 46/788 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQH 64 G ++RIRG VQGVGFRP VW++A+ L+L G V NDG+GV V L E F+ L Sbjct: 3 GYRIRIRGVVQGVGFRPTVWRVARGLSLKGFVLNDGEGVIVALWCNYELASRFVEVLKHE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLA I SV + P +F I +S +N I DAA C C E P RR Sbjct: 63 QPPLASISSVHLQFAALGAPPDDFFIAESDDTAQINAGIPVDAAMCAECAEETLNPASRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCTHCGPR TII+A+PYDRP T MAAFPLCP C++EY++P DRRFHAQPVACP Sbjct: 123 YRYPFTNCTHCGPRLTIIKALPYDRPKTSMAAFPLCPQCEREYQNPADRRFHAQPVACPA 182 Query: 184 CGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 CGP + A+QAA+ ++ GKI+A+KG+GGFHL CDA N + V Sbjct: 183 CGPTVWLCDAEGQEISPSKIGAIDAIQAAVHYIRQGKILAVKGLGGFHLVCDATNQDVVD 242 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPE------ 285 TLR RK RP KP AVM+ A+ + AA ++L + ++P+V++ + V Sbjct: 243 TLRRRKQRPDKPFAVMMKDAEQVGLYCQPSPAALEMLQSVSSPVVIMPTRNVTASLNTEG 302 Query: 286 ---LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ 342 + +AP+L E+G+MLPA P+ LL ++ PLVMTS NLSG P N +AL DL+ Sbjct: 303 CGVIATAVAPNLGELGIMLPATPMHLLLCHDVALPLVMTSANLSGNPQCTDNREALEDLK 362 Query: 343 GIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 GIAD +++HNRDIV R DDSV R++ ++LRR+RG P + LPPGF+ +L +G Sbjct: 363 GIADIWVLHNRDIVTRADDSVFRQTDQGLQILRRARGIAPSPIELPPGFEGTSSILAMGG 422 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 ++KN FCL+ A++SQ++GDL + ++ L Q +Y FTP V D+HP Y++ Sbjct: 423 EVKNAFCLLTSHGAIVSQYIGDLERVRVWEDFQRMLSHYQALYRFTPDRVAIDSHPEYLA 482 Query: 460 SQWAREM--NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 S++A+ + + + HHHAH AAC+ ++Q P+D +V+ + DG+G GENG LWGGE Sbjct: 483 SKFAKSVYDDQIITEIQHHHAHVAACMGDNQLPIDHENVLGVVFDGLGYGENGTLWGGEF 542 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS---ETASVQQQN 574 L +Y + +G L VALPG A QPWRNL+ + + E ++ Sbjct: 543 LLADYHTFKRIGHLETVALPGASKAIVQPWRNLIVWLQHSGIDATDKRAVFEALGIKPNV 602 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT- 633 S + I+ G+N+P +SS GR FDAV+A L SYEG+AA LE LAA+ Sbjct: 603 ASTILSMIQTGLNSPNSSSVGRLFDAVSALLSVCIHEQSYEGQAAIELETLAATGASDVT 662 Query: 634 --HPVTM-PRVDNQLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMR 687 +P T+ + +LD A WQ + A+ FH +LA+ ++ Sbjct: 663 DIYPFTIRDGLPARLDPAPMWQAIVRDVLSFQEPGFIAYKFHVSLAKAIGDMVAHLCQHF 722 Query: 688 ----GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 G+ +V SGGV NRLL L F +L Q +PA DGGL+ GQ +IAAA Sbjct: 723 HVSSGLPKIVLSGGVFQNRLLLKMTVKILNQQGFNVLNHQQVPANDGGLAFGQALIAAAA 782 Query: 742 WLAGEVQN 749 L+G Q+ Sbjct: 783 SLSGNKQS 790 >UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=Q65SA7_MANSM Length = 770 Score = 944 bits (2440), Expect = 0.0, Method: Composition-based stats. Identities = 409/773 (52%), Positives = 502/773 (64%), Gaps = 40/773 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE----DPET 56 M ++LRI+GKVQGVGFRPFVW LA Q L GDV NDG GV +R E + Sbjct: 1 MNTEKQSVIELRIKGKVQGVGFRPFVWLLANQYGLKGDVNNDGQGVLIRFIEPDCASLQQ 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLP--TEFTIRQSTGGTMNTQIVPDAATCPACLA 114 FL L PPLA+I ++ I LP ++FTIR+S ++TQIVPDAATCPACL Sbjct: 61 FLRDLQNKLPPLAQITEIQETTKIGENLPHFSDFTIRESENNAVDTQIVPDAATCPACLK 120 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E+ P RR+ YPF NCTHCGPRFTII+++PYDRP T MA FP CP C++EY++P DRRF Sbjct: 121 ELFAPRNRRFHYPFTNCTHCGPRFTIIKSIPYDRPNTSMANFPFCPECEREYKNPADRRF 180 Query: 175 HAQPVACPECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 HAQP ACP CGPH+ + H + A+ EAAL + L GKI+AIKGIGGFHLACDA N Sbjct: 181 HAQPNACPVCGPHIWLQNQHTKIADHEAALIQTLHLLNEGKIIAIKGIGGFHLACDATNR 240 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD---GLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 V LR+RK RP KPLA+M+P L A +LLT+ AAPIVL+ K VP + + I Sbjct: 241 QTVQLLRSRKRRPTKPLAIMVPDLQFLTALSRAETKLLTSSAAPIVLLSKHKVPAVDELI 300 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP LNE+GVMLP+NPLQHLLL+ + PLVMTS N SG+PP + NE A+ LQ +AD +L Sbjct: 301 APHLNEIGVMLPSNPLQHLLLKAINKPLVMTSANPSGQPPVLDNESAVKFLQNLADFYLC 360 Query: 351 HNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNRDI+QR DDS+VR + E LRR+RGYVPD ++L N +L LG+DLKNTFCL Sbjct: 361 HNRDILQRADDSLVRIAFDGLETLRRARGYVPDEISLN--ISNNKNILALGSDLKNTFCL 418 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWA 463 ++ +AV+SQH+GD +D+ ++ Q E L L Q+IY F + D+H GY SS Q A Sbjct: 419 LKRNKAVVSQHIGDTADEKVRSQLEENLALFQHIYQFKADLIAVDSHTGYFSSATGRQIA 478 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 + +P +LHHHAH A +AEH VI + LDGIGMGEN LWGGECL +N Sbjct: 479 QCQQIPVMEILHHHAHIRAVMAEHNC---NEKVIGIALDGIGMGENQQLWGGECLLINRT 535 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIE 583 E +HLGGLPAVALPGGDLAA QPWRN LA +FV WQ + S ++ NW L+RAIE Sbjct: 536 EVKHLGGLPAVALPGGDLAATQPWRNWLAHIHQFVENWQELAA-KSCEKYNWQSLSRAIE 594 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-----GVTHPVTM 638 + IN P SS GR FDAVA +L AP LS+EGEAAC LEALA V + Sbjct: 595 QKINCPTISSAGRLFDAVAYSLNIAPENLSWEGEAACRLEALAGQSQFTEKSAVKIRQIL 654 Query: 639 PRVDNQ------------LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM 686 P ++ L+LA FWQ W N++A +A+AFH ALA GFA L R+QA Sbjct: 655 PEFADELIWTNDKNNKTFLNLAKFWQSWRNYKAQKADKAFAFHLALAAGFAELARQQANK 714 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 T+V SGGV+HNRLLR L L +F +L P GDGGLSLGQ IAA Sbjct: 715 YQCRTIVLSGGVMHNRLLRRLLKENLQEFNVLSAHQFPMGDGGLSLGQAAIAA 767 >UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis sp. PCC 6803 RepID=HYPF_SYNY3 Length = 767 Score = 942 bits (2436), Expect = 0.0, Method: Composition-based stats. Identities = 309/775 (39%), Positives = 417/775 (53%), Gaps = 49/775 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG--VEVRLRE-DPETFLVQLYQ 63 V ++++G+VQGVGFRPFV+ LAQ++ L+G V N G V + E F +L + Sbjct: 3 KTVAIQVQGRVQGVGFRPFVYTLAQEMGLNGWVNNSTQGATVVITADEKAIADFTERLTK 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP I+ + E T FTIR S+ G I+PD +TC ACL E+ P +RR Sbjct: 63 TLPPPGLIEQLAVEQLPLES-FTNFTIRPSSDGPKTASILPDLSTCSACLTELFDPSDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCTHCGPR+TII A+PYDR T MA F C C++EY+ P DRRFHAQP ACP Sbjct: 122 YLYPFINCTHCGPRYTIIEALPYDRCRTTMARFRQCTDCEREYKQPGDRRFHAQPNACPR 181 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L + + AE AL A+ LK+G I+AIKG+GGFHL CDA + AV LR Sbjct: 182 CGPQLAFWNRQGQVIAEANEALNFAVDNLKVGNIIAIKGLGGFHLCCDATDFEAVEKLRL 241 Query: 242 RKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RKHRP KPLAVM + + +LL + AAPIVL++KK L ++IAP Sbjct: 242 RKHRPDKPLAVMYGNLGQIVEHYQPNNLEVELLQSAAAPIVLLNKKKQLILVENIAPGNP 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 VGVML PL HLLL++L+ P+V TSGNL+G+ I N AL LQ IADGFL+H+R I Sbjct: 302 RVGVMLAYTPLHHLLLKKLKKPMVATSGNLAGEQICIDNIDALTRLQNIADGFLVHDRPI 361 Query: 356 VQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V +DDSVV+ LRR+RGY P + LP +L +G KNT + + Q Sbjct: 362 VCPVDDSVVQIVAGKPLFLRRARGYAPQPITLPKP--TQKKLLAMGGHYKNTVAIAKQNQ 419 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 A +SQHLGDL+ + EA+ + +YDF+PQ +V D HP Y S Q+A LP Sbjct: 420 AYVSQHLGDLNSAPTYQNFEEAIAHLSQLYDFSPQEIVADLHPDYFSHQYAENQALPVTF 479 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH+AH A +AEH V+ + DG G G +G +WGGE L++ + + L Sbjct: 480 VQHHYAHILAVMAEHGV--MEESVLGIAWDGTGYGMDGTIWGGEFLKITQGTWQRIAHLQ 537 Query: 533 AVALPGGDLAAKQPWRNLLAQC----------------LRFVPEWQNYSETASVQQQNWS 576 L G A K P R LA L F ++N + Q N Sbjct: 538 PFHLLGNQQAIKYPHRIALALLWPTFGDDFSADSLGNWLNFNNGFKNKINSRLNQDLNNK 597 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA-LAASCHGVTHP 635 L + +RG APL SS GR FD +A +G +++EG+AA ALEA + + +P Sbjct: 598 NLRQLWQRG-QAPLTSSMGRLFDGIATLIGLINE-VTFEGQAAIALEAQIMPNLTEEYYP 655 Query: 636 VTMPRVDNQL--DLATFWQQW-LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 +T+ + +L D + ++ N A FH++L + A +GI + Sbjct: 656 LTLNNKEKKLAVDWRPLIKAITTEDRSKTNLIATKFHNSLVNLIITI----AQQQGIEKV 711 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ--GVIAAARWL 743 GG N L A L A F+ L+P+ LP DG + +GQ I A +++ Sbjct: 712 ALGGGCFQNCYLLASTITALKKAGFSPLWPRELPPNDGAICMGQLLAKIQARQYI 766 >UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B205_SULD5 Length = 744 Score = 940 bits (2431), Expect = 0.0, Method: Composition-based stats. Identities = 266/746 (35%), Positives = 383/746 (51%), Gaps = 32/746 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + I G VQGVGFRPFV+ LA + L G V N+ GV + + E+F L+ Sbjct: 5 IRFRYGIEGIVQGVGFRPFVYTLALRYGLFGFVLNNEKGVVIEVEGSFMSLESFESALFH 64 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGER 122 P LARID +E Q F I ST G+ ++ I+PD + C ACL E++ P R Sbjct: 65 ELPSLARIDFFTKEEIPP-QYEKSFEIAHSTKGSHKSSLILPDMSLCDACLKELHDPNNR 123 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY Y F NCT+CGPR++I++ +PYDRP T M F +C AC KEY +PLDRR+HAQP++C Sbjct: 124 RYHYFFTNCTNCGPRYSIVKTVPYDRPNTSMHPFCMCEACQKEYTNPLDRRYHAQPISCI 183 Query: 183 ECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 ECGP L S A EAAL A ++ G IVA+KG+GGFHL CDA N V LR Sbjct: 184 ECGPTLFLRSIEGKIVATNEAALHHLAALIRAGNIVAMKGMGGFHLVCDASNEKVVHRLR 243 Query: 241 ARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPEL-CDDIAPD 293 RK R +KP AVM + + ++ +T+ PIVLV + L +AP Sbjct: 244 ERKKRASKPFAVMFKTIEAIEAVCEVGIKEKEAITSLLRPIVLVKHQTKNTLIAPSVAPR 303 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L+ +GV LP PL +L + L+ P+V TS NLSG+P +Q + L + D +L +NR Sbjct: 304 LDRLGVFLPYTPLHVMLFEYLKNPMVATSANLSGEPILYDAKQVVEKLSHVIDYYLDYNR 363 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +IV DDSVV+ G+ ++R SRG P + ++ +LC+GA KN + Sbjct: 364 EIVNSSDDSVVQFVGDARILMRSSRGIAPQSFRFVG--EDERKILCVGAHQKNAIAIYWN 421 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 Q V+S ++GDL + L + Y+F P+ +V D HP Y S+QWA++ +P Sbjct: 422 HQMVISPYIGDLDTLASCELFEAMLERFKRFYNFEPELIVADKHPRYFSTQWAQKQGIPY 481 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH+AH + + EH+ V+ + DG G GE+G +WGGE L + + E + Sbjct: 482 VLVQHHYAHILSAMCEHKL---NETVLGIAWDGTGYGEDGTIWGGEFLVCDREKYERVAY 538 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 AL GGD + K R L + + E N L + + IN+PL Sbjct: 539 FEPFALLGGDASIKDIKRILASLLWDALGEDANAVLLEYFDALALKRLHQVYHKKINSPL 598 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 SS GR FDAVA G +SY+GE+ +E L + VT + ++ Sbjct: 599 CSSVGRLFDAVAVLCGL-EGEVSYDGESGLLIEGLFNPSIREHYTVTFR--EKEIGYKVM 655 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + + + + P + A F + L F + ++ + V +GGV NR L +L Sbjct: 656 FIEMIQDKEP-SLIASKFLNTLVYIFNEVTQKYPYKK-----VVAGGVFQNRTLLEQLLE 709 Query: 711 YLADFTLLFPQSLPAGDGGLSLGQGV 736 + L FP ++ DGG+ +GQ Sbjct: 710 KREE-KLYFPHNIAINDGGICVGQLY 734 >UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4L8_ACIC5 Length = 781 Score = 939 bits (2429), Expect = 0.0, Method: Composition-based stats. Identities = 295/765 (38%), Positives = 399/765 (52%), Gaps = 41/765 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 + L +RG VQGVGFRP+++ LAQ+ L G V N G GV + + +F+ L Sbjct: 13 ARISLTLRGIVQGVGFRPYIYNLAQRHQLSGYVLNTGAGVTIEVEGAAASLHSFIHTLPA 72 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGER 122 PPLARID ++ I F IR+S + +VP D C ACLA+ R Sbjct: 73 QIPPLARIDDLQL-AIIEVIGERNFVIRESDRSQSSFALVPSDICLCDACLADTRDSTNR 131 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R YPF NCT+CGPR++I+ +PYDRPFT MA F +CP C +EY DP +RRFHA+P ACP Sbjct: 132 RNWYPFTNCTNCGPRYSIVIDLPYDRPFTTMAEFSMCPDCRREYNDPTNRRFHAEPNACP 191 Query: 183 ECGPHLEWVSHGEHAEQEA---ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGP L L QL G+I+A KG+GG+ LACDA +AV+TL Sbjct: 192 VCGPKLSLSPATAEIPDGDSRAILTYIARQLISGRIIAWKGLGGYQLACDATREDAVSTL 251 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHR KP A+M+ + R L + PIVL+ +K L ++P Sbjct: 252 RRRKHRSEKPFAIMVAGITAAEQLCVVSPLERTALLSSQRPIVLLRRKTAANLAASVSPG 311 Query: 294 LNEVGVMLPANPLQHLLL------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 GVMLP+ P+ LL PLVMTSGNLS +P A+ N++A A L +AD Sbjct: 312 NPTTGVMLPSTPMHDLLFLALRELAGASIPLVMTSGNLSEEPIAVDNDEAEAKLADVADL 371 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 F+ HNR I R+DDSVVR + +RR+RG+ P + L G VL GA KNT Sbjct: 372 FVHHNRRIHTRVDDSVVRVIDDEVLPIRRARGFAPQPVWLGMGE---VQVLACGAQQKNT 428 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA- 463 CL + A SQH+GDL + + + + M ++ P+ + HD HPGY+S+QWA Sbjct: 429 LCLTKSGFAFPSQHMGDLENYETLEFFEQTRKRMCRLFHIEPEVIAHDLHPGYLSTQWAL 488 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 R+ + V HHHAH AAC+AEHQ VI + DG G+G + +WGGE L + R Sbjct: 489 RQSGIRHIPVQHHHAHIAACMAEHQLR---NPVIGVAWDGTGLGTDNTIWGGEFLIADLR 545 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR-FVPEWQNYSETASVQQQNWSVLARAI 582 + L V L GGD A ++PWR + L F+ + A + Q+ V+ + Sbjct: 546 SFQRAAHLRTVHLAGGDTAVREPWRVAYSYLLDTFIDQPPAPPSFAQLPQERTRVVDTML 605 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-GVTHPVTMPRV 641 + ++ SS GR FDAVAA +G AT+SYEG+AA ALEA+AA + P + Sbjct: 606 RQHLHTVPTSSAGRLFDAVAALIGIH-ATVSYEGQAAVALEAIAADANLTEPEPYPFNLI 664 Query: 642 DN---QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 D+ QLD + P A FH L + R+ I + S Sbjct: 665 DDASMQLDFRPMIAALIEEVLSNEPKQLMAARFHATLVCAIVRVCRKIRETTHINQVCLS 724 Query: 696 GGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 GG N+LL + L F + FP+++PA DGG+SLGQ IA Sbjct: 725 GGCFQNQLLLRGSRNTLRASGFEVYFPRAVPANDGGISLGQAAIA 769 >UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Tax=Cyanobacteria RepID=A8ZNU8_ACAM1 Length = 834 Score = 933 bits (2413), Expect = 0.0, Method: Composition-based stats. Identities = 300/811 (36%), Positives = 433/811 (53%), Gaps = 79/811 (9%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQL 61 T +QL I+G VQGVGFRPF+++LA +L L G V ND GV + + PE FL QL Sbjct: 12 THQRLQLTIQGAVQGVGFRPFIFRLATRLKLRGWVSNDTQGVVIEVEGGPERLNQFLAQL 71 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 + P LA I++++++ T FTIR S G T ++PD ATC CL E+ P + Sbjct: 72 QANPPVLAEIETIKQKCIPPLGEHT-FTIRPSQNGPKTTLLLPDVATCADCLRELFNPSD 130 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCTHCGPR++IIRA+PYDR T MA+F +CP C EY++PL RRFHAQP+AC Sbjct: 131 RRYRYPFINCTHCGPRYSIIRALPYDRGNTAMASFHMCPDCLSEYQNPLSRRFHAQPIAC 190 Query: 182 PECGPHL--------EWVSH--------------GEHAEQEAALQAAIAQLKMGKIVAIK 219 P CGP + WVS+ E E A+ A L+ G IVA+K Sbjct: 191 PTCGPIVEVGYWQKERWVSNQLQGQAVQQNQEGIAEKTEGLGAIGLAAVALRQGLIVAVK 250 Query: 220 GIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAA 273 G+GGFHL DARNS+AV LR RK RP KP A+M P + + + +LL +P A Sbjct: 251 GVGGFHLLVDARNSDAVKRLRTRKKRPNKPFALMYPSLERVKHTCEVSELEAELLQSPKA 310 Query: 274 PIVLVDKKY---VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPP 330 PIVL+ +++ + D++AP + +GV+LP P+ HLL+ +L P+V TSGNL+G P Sbjct: 311 PIVLLQRRHLSLADPIADEVAPGCSHLGVLLPYTPIHHLLMADLDFPIVATSGNLNGAPI 370 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPG 387 + + E+AL DL+ IAD FLI NR I+ +DDSVV+ ++ RR+RGY P L++ Sbjct: 371 SFNGEKALDDLKSIADLFLIQNRPILHPIDDSVVQVINGQTQLRRRARGYAPLPLSVTFP 430 Query: 388 FK-----------------NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQ 430 P +L +G+ LKNT L + +SQHLGDL + Sbjct: 431 SHHSSPKGLSATPQSTRPPKRPTILAVGSHLKNTIALSLDDHVFMSQHLGDLDTVPSIDR 490 Query: 431 WREALRLMQNIYDFTPQYVVHDAHPGY----VSSQWAREMNLPTQTVLHHHAHAAACLAE 486 +++ L+ + +Y+ P V DAHP Y + A++ +P +V HH+AH AC+AE Sbjct: 491 FQQTLQALLQLYECQPNLVACDAHPDYASTQAAQALAQQWQVPLLSVQHHYAHVLACMAE 550 Query: 487 HQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQP 546 V+ + DG G G + +WGGE L++ E +G LPGGD AA++P Sbjct: 551 QHL---AAPVLGIAWDGAGYGLDETVWGGEFLQITPTGFERVGYWRPFFLPGGDQAAREP 607 Query: 547 WRNLLAQCLRFVP----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVA 602 R + EW+ + + Q + VL ++R +N PL SS GRFFDA+A Sbjct: 608 RRTAMGLLYTCFGGEIFEWEGLAPLKAFSQPSAQVLQSMLDRSLNTPLTSSVGRFFDAIA 667 Query: 603 AALGCAPATLSYEGEAACALEALAAS-CHGVTHPVTM-PRVDNQLDLATFWQQWL---NW 657 + T +EG+AA ALE++ +P + + +D L + Sbjct: 668 SLTDL-MQTTHFEGQAAMALESILGRVATEDDYPFHLSSSLPFVMDWEPMLIAILADIDQ 726 Query: 658 QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD--F 715 + + FH+ L + + + G +V +GG N+ L + H L + + Sbjct: 727 GVDTSWISTKFHNTLVEIIVQIAHQI----GEPYIVLTGGCFQNQYLSEKAIHRLRENQY 782 Query: 716 TLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 + Q +P DGG++LGQ ++AA R AG Sbjct: 783 RPYWHQQVPTNDGGIALGQ-IMAAHRHYAGR 812 >UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCQ3_PELPB Length = 849 Score = 933 bits (2413), Expect = 0.0, Method: Composition-based stats. Identities = 305/840 (36%), Positives = 411/840 (48%), Gaps = 107/840 (12%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQ 60 + +LR+ G VQGVGFRPFV++LA +L G +CN GV + ++ F + Sbjct: 19 SAEERRRLRVNGMVQGVGFRPFVYRLAVACDLKGFICNTASGVLIEVQGQLSLLNEFSRR 78 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTP 119 L PPLA I+++E F I S G + T I PD A C C E+ P Sbjct: 79 LLGERPPLAFIETIEEMSLPCVSEEA-FLIGNSGSGVGVETLIPPDIALCSDCRRELLDP 137 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RR+RYPFINCT+CGPR+TI+ +PYDRPFT M F +C AC++EY DPLDRRFHAQP Sbjct: 138 ANRRFRYPFINCTNCGPRYTIVDRLPYDRPFTSMHGFTMCEACEREYHDPLDRRFHAQPN 197 Query: 180 ACPECGPHLEWVSHGE-----------------------------HAEQEAALQAAIAQL 210 ACP CGP L H + A+A L Sbjct: 198 ACPVCGPTLSLFDASGTLLLGESVVEHNPVDGTSHAQPKTALSCAHTLSGDVVAEAVAFL 257 Query: 211 KMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAA 264 + G IVA+KG+GGFHLA DARN AV LR RK R AKP AVM+ + + Sbjct: 258 RRGMIVALKGLGGFHLAVDARNEAAVRRLRERKGREAKPFAVMIRDRSLVHGYCEVSETE 317 Query: 265 RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGN 324 L+ APIVL+ KK L IAP +GVMLP PL LL E LVMTS N Sbjct: 318 MAALSAAQAPIVLLKKKKSSNLAPSIAPGNERLGVMLPYTPLHTLLFDETLDILVMTSAN 377 Query: 325 LSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDA 381 S +P A NE+AL L+GIAD FL+HNR I + DDSV + + LRRSRGYVP Sbjct: 378 FSEEPIASENEEALLRLKGIADAFLVHNRPIYLKCDDSVTIALSGTLRQLRRSRGYVPAP 437 Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 + L ++ P VL G +LKNT +++G A++SQH+GD+ + + + + +Q++ Sbjct: 438 IYLR---EDGPVVLAAGGELKNTITILKGSHALMSQHIGDMKNYEAYRHFVQVVAHLQHL 494 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 + P+ +VHD HP Y+++QWA N+P V HHHAH +CLAE++ + G I L L Sbjct: 495 FQAVPKLLVHDLHPAYMTTQWAMMQNIPLLGVQHHHAHLVSCLAENR---EEGPAIGLIL 551 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG G G +G +WGGE L + L + LPGG+ A PWR L R P+ Sbjct: 552 DGTGYGTDGTIWGGEVLIGDAAGAARFASLELMPLPGGEAAVMHPWRAALGYLHRSCPDL 611 Query: 562 QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 + ++ ++ + +++ + SSCGR FDAVAA +SYEGEAA A Sbjct: 612 PDLP---FMKGRSIEPVLELLQKRVTIVETSSCGRLFDAVAALCALR-GEISYEGEAAIA 667 Query: 622 LEALAASCHGVTH----------------------------PVTMPRVDN---------- 643 L A G P R+ N Sbjct: 668 LMHEAGGSMGSKSFRYGLHYEQKPALAPVQSAGGTIGTNDIPAVTERLINTPRGTIANKH 727 Query: 644 ----------QLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 + ++ + L + + FH L F ++ + + GIT Sbjct: 728 DLLHEEKGRWTMLVSPIIRDVVTALQTGMAAGEISRRFHRTLVNCFYEIIGKASKATGIT 787 Query: 691 TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 T+ SGGV N LL L L A + +L +P+ DGGLSLGQ +I +L G Q Sbjct: 788 TVALSGGVFQNALLFEALVTELQRAGYKVLTQALVPSNDGGLSLGQALIGRT-YLNGNYQ 846 >UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 Tax=Bacteria RepID=A7NKB8_ROSCS Length = 779 Score = 931 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 319/766 (41%), Positives = 410/766 (53%), Gaps = 41/766 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 ++ + +L +RG VQGVGFRPFV+ LAQ+L L G V ND DGV + + + F Sbjct: 10 DQSQNIRRRLMVRGMVQGVGFRPFVYNLAQRLGLGGFVLNDSDGVTLEIEGPASALDAFE 69 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMN 117 L PPLARID++ EP S+ T F I S T+ NT I PD ATC CL E+ Sbjct: 70 QTLRTSPPPLARIDAIGAEPVA-SRGETHFRIETSRAATVRNTLISPDVATCDDCLRELF 128 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RR+ YPFINCT+CGPRFTI+ +PYDR T M FP+CPAC EY DPLDRRFHAQ Sbjct: 129 DPADRRFGYPFINCTNCGPRFTIVLDVPYDRAQTTMRVFPMCPACRSEYDDPLDRRFHAQ 188 Query: 178 PVACPECGPHLEWVS-----HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 P AC CGP L + + L A A L G I+AIKG+GG+HLACDA + Sbjct: 189 PNACAVCGPSLAFHWWSTEFRPRLPVHASPLDQAAAALAQGAILAIKGLGGYHLACDALD 248 Query: 233 SNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPEL 286 S AVA LR RK R AKP A+M P + + LL + PIVL+D + Sbjct: 249 SAAVARLRVRKQREAKPFALMAPDLEAIQRLCSVNPDEEALLESRRRPIVLLDALPNVPV 308 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQEL-----QCP--LVMTSGNLSGKPPAISNEQALA 339 +AP +G+MLP PL HLLL+ P LVMTSGNLS +P A ++ A+A Sbjct: 309 APSVAPGYATLGIMLPYTPLHHLLLRAYAKEAPGRPAVLVMTSGNLSDEPIAYRDDDAVA 368 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLC 396 L IADG L HNRDI R DDSV R ++LRRSRGY P+ + L F P+L Sbjct: 369 RLASIADGMLTHNRDIHMRCDDSVARIVAGGVQLLRRSRGYAPEPVTLTLHF--PRPLLA 426 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +G LKNTFCL + A LS H+GDL + +RE +R ++D P+ V +D HP Sbjct: 427 VGGHLKNTFCLAKEHDAFLSHHIGDLENLETLTSFREGVRHFARLFDCEPEVVAYDLHPE 486 Query: 457 YVSSQWAREMNLPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 Y++++ A ++P V HHHAH A+ LAEH VI + DG G G +G++WG Sbjct: 487 YLATKEALASDIPLKIGVQHHHAHIASVLAEHGIE---DPVIGVAADGTGYGIDGSIWGC 543 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETASVQQ 572 E L + RE L + LPGGD A +Q WR R + + +++ Sbjct: 544 EVLIADLREFTRFAHLAYIPLPGGDAAVRQVWRIGATYLQRAFGDAFLDLDIPFVQRIRR 603 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 Q W+++AR IERGINAPL SS GR FDAVAA G L YEG+AA LE +AA Sbjct: 604 QQWTLIARMIERGINAPLTSSLGRLFDAVAAIAGIRDHAL-YEGQAAIELETVAAQDDRP 662 Query: 633 THPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 + ++D + L APV + FH +A+ A Sbjct: 663 YPFALLDGAPLRIDALPTIRAIVEDLRAGAPVALVSGRFHSTVAEALAQACERARATGAP 722 Query: 690 TTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLG 733 + SGGV NR L L L F +L + +P DGGL LG Sbjct: 723 AVVALSGGVFQNRRLTELLVARLERTGFRVLLNRRVPPNDGGLCLG 768 >UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogenase maturation protein n=12 Tax=Bacteria RepID=A5E9B2_BRASB Length = 824 Score = 927 bits (2396), Expect = 0.0, Method: Composition-based stats. Identities = 319/791 (40%), Positives = 440/791 (55%), Gaps = 50/791 (6%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQL 61 VQ+R+RG+VQGVGFRP VW+ A+++ L G+V NDG+GV +R R D ET + +L Sbjct: 17 ALESVQIRVRGRVQGVGFRPTVWRHAREVGLDGEVLNDGEGVLIRARGQGKDIETLVRRL 76 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 P LA I+++E EPF P F I +S T+I PDAA CPAC AE+ P E Sbjct: 77 RDEAPLLAAIEAIEVEPFTGRLAP-GFRIIESNRSEARTEISPDAAICPACAAEVLDPFE 135 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+RY F NCTHCGPRFTIIR++PYDR T MAAFP+C C EY DP +RRFHA+P+AC Sbjct: 136 RRFRYAFTNCTHCGPRFTIIRSIPYDRSATTMAAFPVCAECAAEYGDPANRRFHAEPIAC 195 Query: 182 PECGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 CGP + V A + AA++ ++ G+IVA+K +GG+ LACDA + Sbjct: 196 HACGPKAQLVRFDGRALTYEQHSMFDDVDAAMSLIQKGEIVAVKALGGYQLACDATRLDT 255 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 V LR K R KP A+M D + + L +PAAPIVL+D L + Sbjct: 256 VERLRLLKRREVKPFALMARDLDVIRRFCAVSPDEEEALCSPAAPIVLLDAAGPERLPEA 315 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +AP + +G MLP+ PL L+ + + P++MTSGNLS +P AI + +A L I L Sbjct: 316 VAPGMRMLGFMLPSTPLHVLMFRRMPRPVIMTSGNLSDEPQAIGDAEAARKLGTITPYAL 375 Query: 350 IHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 +H+R+I R+DDSV+R +LRR+RGY P +++LP GF++ P +L G ++K TFC Sbjct: 376 VHDREIANRVDDSVMRVMDGRMRLLRRARGYAPASISLPKGFEDSPDILAYGPEMKATFC 435 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 LV+ +AVLSQH GDL D +R+ L L ++++ PQ + D HP Y+S++ AR+ Sbjct: 436 LVKEGRAVLSQHQGDLQDAATWDDYRKNLALFRDLFAHDPQALACDMHPEYLSAKLARKR 495 Query: 467 ----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 +L V HHHAH AACL E+ LD V+ + LDG+G G + +WGGE L +Y Sbjct: 496 ASEDSLALIEVQHHHAHIAACLTENARALDAPRVLGIALDGLGYGTDDTIWGGEFLLCDY 555 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL------RFVPEWQNYSETASVQQQNWS 576 R + +G VA+ GG A+++PWRNL A F ++ + + + Sbjct: 556 RGFQRVGTFRPVAMVGGAAASREPWRNLYAHLTAQMGWAAFAMNFRQLPLFERLAAKPRA 615 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA------LAASCH 630 VL I IN+PLASSCGR FDAVAAAL +YEGEAA LEA LA Sbjct: 616 VLDTMIHDHINSPLASSCGRLFDAVAAALDVCFERQAYEGEAAARLEAIACPKTLAEEDD 675 Query: 631 GVTHPVTMPRVDNQ----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQ 683 + +P+ +P + ++ W L P A FH ALA+ + + Sbjct: 676 SLCYPMPIPVLKGSGLPYIEPLAMWNAILGDLILGTPQPIIAARFHKALARSIVTMAIQL 735 Query: 684 ATMRG------ITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQG 735 A T+ SGG NR+L + L F +L +PA DGG++LGQ Sbjct: 736 ARRDDEDAQPRFDTVALSGGCFQNRILLEQTVRRLEEKKFKVLTHAKVPANDGGVALGQA 795 Query: 736 VIAAARWLAGE 746 IAAA + E Sbjct: 796 TIAAAHLIDAE 806 >UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Shewanella RepID=A8FUJ1_SHESH Length = 783 Score = 926 bits (2394), Expect = 0.0, Method: Composition-based stats. Identities = 272/777 (35%), Positives = 394/777 (50%), Gaps = 49/777 (6%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQ 60 N++ V++ + G VQGVGFRPFV++ A+ L G V N+G GV + ++ + E+F+ + Sbjct: 16 NSAVRVEIIVTGIVQGVGFRPFVYRYAKDEELCGFVLNNGQGVTIEVQGKWRNIESFIAR 75 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTP 119 PPLARID++ +P +F I S G T + PD + C ACL E+N P Sbjct: 76 FDTSPPPLARIDTLSSKPIAIVDDCQDFIIVASDGNTSAVVAVSPDKSCCSACLEEINAP 135 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 R YRYPF NCT+CGPR+T+I+A+PYDR T MA+F +C C+ Y DP+DRR+HAQPV Sbjct: 136 DNRHYRYPFTNCTNCGPRYTLIKALPYDRKHTSMASFAMCSRCEASYLDPMDRRYHAQPV 195 Query: 180 ACPECGPHLEWVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 +CP+CGP L +S A AL + +L G+IVAIKG+GGFHL CDA N +AV Sbjct: 196 SCPQCGPQLSLLSSDGDIVSHADMALTETVQRLLQGEIVAIKGLGGFHLVCDATNHDAVQ 255 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVP--ELCDD 289 LR RK RP KPLAVM+ + LT+ PI ++ K L Sbjct: 256 RLRERKRRPGKPLAVMVSSLEMAKSIVTGSQFEWDQLTSIERPITIMTKNRSNTVNLSPA 315 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IAP ++++GV LP PL LLL+EL P+V TS N SG+P ++ +A L + D L Sbjct: 316 IAPGIDKLGVFLPYTPLHSLLLKELDIPIVATSANRSGEPIICDGKEIIAQLSEVVDSIL 375 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 HNR I+ DDSV++ G ++LR +RG+ P ++ P G + L +GA KN+ Sbjct: 376 DHNRPIINACDDSVIQCIGDEVQVLRLARGFAPLSIRNPTGSASHQ--LAVGAQQKNSIA 433 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 ++ VLS H+GDL + + L + +Y F+P+ V+ D HP Y S+WA+ Sbjct: 434 FGFADKMVLSPHIGDLFSLEAESYFEHTLATFKRLYQFSPKTVIRDKHPDYAPSKWAQRF 493 Query: 467 -----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 + + HHHAH + +A +Q V+ + DG G+G++ +LWGGE L + Sbjct: 494 IELNEGVKQLEIQHHHAHILSVMAVNQVK---DKVLGFSFDGTGLGDDQSLWGGEALIAD 550 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSV 577 E + + L GG+ A K P R LLA + + + + Sbjct: 551 VNGFERVCHIKPFMLIGGEQAIKDPKRLLLAILFQQYSLEELGALSLPILTKTDPRLIEN 610 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG----VT 633 L + + SS GR FDAVA LG +EG+A LEA A Sbjct: 611 LHKIWQSKSRCIETSSIGRIFDAVAVLLGLIEKNQ-FEGQAGMLLEAAANRFDDHIATEE 669 Query: 634 HPVTMPRVDNQLDLATFWQQWLNW-------QAPVNQRAWAFHDALAQGFAALMREQATM 686 ++P +D L T ++Q ++ + V A F ++L A L ++ + + Sbjct: 670 FCYSLPVIDGMWHLDTLFKQLVSSVTQETLTEQRVCAIARGFMNSLGDAVAKLAKQHSPL 729 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 +V SGGV NR L L L P +P DGG++LGQ Sbjct: 730 ----PVVLSGGVFQNRYLSELCITKLNEQGSKRLMPHHVPINDGGIALGQLWYGLHH 782 >UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLE4_CLOCL Length = 773 Score = 926 bits (2393), Expect = 0.0, Method: Composition-based stats. Identities = 273/771 (35%), Positives = 398/771 (51%), Gaps = 44/771 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 + RI+G VQGVGFRPF+ ++ + L G V ND +GV V ++ D ++F+ + CP Sbjct: 5 RYRIKGIVQGVGFRPFIHKITAKYELKGWVLNDSEGVVVEVQGKQRDIDSFIDDVKISCP 64 Query: 67 PLARI-DSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 P+A+I D +E + +F I++S NT I PDA C C+ E+ RRY Sbjct: 65 PMAKIQDIIEIPVSKSQKRYADFIIKRSIQRRETNTFIPPDAYVCKECVDELLDKNNRRY 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +YPFINCT+CGPR+TII+ MPYDR T M F +CP C KEY+D RR+HAQP ACP C Sbjct: 125 KYPFINCTNCGPRYTIIKEMPYDRISTTMKEFKMCPDCQKEYKDINSRRYHAQPNACPIC 184 Query: 185 GPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP LE +GE + + +L GKI AIK IGGFHLA +A + V LR K Sbjct: 185 GPQLELRDKNGEVVIATDVISFSKERLLEGKIFAIKSIGGFHLAANALDEKIVKKLRLLK 244 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R +KP A+M+ + + ++LL PIVL+ KK L D IAP+ Sbjct: 245 KRDSKPFAIMVNDTKMAEKYMEVSEEEKKLLNGVERPIVLLKKKP-HMLPDAIAPNNPSY 303 Query: 298 GVMLPANPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVMLP+ PL +LLL++ + L+MTSGN+SG+P N +A+ L IAD F+++NRDI Sbjct: 304 GVMLPSAPLHYLLLEDGRLEALIMTSGNISGEPIVYENNEAIKQLNSIADYFILNNRDIY 363 Query: 357 QRMDDSVVRESG---------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 R+DDS+VR S ++RR+RG+ P + + K V ++ LG++LK T Sbjct: 364 TRVDDSIVRYSNSNSLRKPITSIIRRARGFAPYPIIID---KKVTSIVALGSELKATVAT 420 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 + +SQH+GD+ +D I A+ ++ + P+ +V D HP + SS A + Sbjct: 421 SKCNTVFISQHIGDVKNDKIFESLFNAVEHLKKLLTIEPKVLVCDLHPNFKSSLKAMSQS 480 Query: 468 -LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 LP V HHHAH AAC+AE+ D I + DG G G +G +WGGE L +Y + Sbjct: 481 ELPVIKVQHHHAHMAACMAENNLEEDT---IGIIFDGTGYGHDGTIWGGEFLVGDYNSVK 537 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNWSVLARAIE 583 +G L + L GGD A K+P+R L R E + +Q + + E Sbjct: 538 RVGSLDSFYLLGGDKAIKEPFRVALDILYRTYGEGMLQLGLPFLSKYTEQEMKIYYKMSE 597 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD- 642 + INA +S GR FD V+ + ++ YEG+AA LE L + + Sbjct: 598 KKINAFETTSMGRLFDGVSVLINLC-TSIEYEGQAAIELEGLLNRDFTLDKSFNYEILQR 656 Query: 643 ---NQLDLATFWQQWLNW----QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 D ++ +N + ++ + FH + ++ I +V S Sbjct: 657 DDRYIFDYRAMIREIVNLVSEKEYDISNLSRRFHSTIISALVSITNRIRKDYKINNVVLS 716 Query: 696 GGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 GGV N L L +F + + +P DGG+SLGQ ++A A + Sbjct: 717 GGVFMNEYLLVNSIIALENLNFNVFYHSKVPTNDGGISLGQVMVADAIYNK 767 >UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Synergistaceae RepID=C1TMC9_9BACT Length = 753 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 290/756 (38%), Positives = 411/756 (54%), Gaps = 32/756 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 ++ + G VQGVGFRPF +LA L L G V N DGV + LR + ++ L P Sbjct: 5 EILVTGVVQGVGFRPFCAKLASSLGLGGSVINSSDGVVIVLRGTERSIDNYIKNLKDTKP 64 Query: 67 PLARIDSVER--EPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERR 123 A I S+ E LP F I +S I PD TC CLAEM P +RR Sbjct: 65 DPADIHSITIISERKTDGDLPGAFVIGKSRRTERQRVLIPPDIGTCDRCLAEMRDPSDRR 124 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT CGPRF+I+ +PYDRP T M+ FP+C C+ EY D +RR+HAQP AC + Sbjct: 125 YRYPFINCTDCGPRFSIVSGLPYDRPKTTMSIFPMCDRCNGEYTDQENRRYHAQPNACAD 184 Query: 184 CGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + + + GE +E + LK GK+VAIKG+GGFHLACD V+TLR R Sbjct: 185 CGPSVWFQTELGEPYLREDGIGRCREYLKAGKVVAIKGLGGFHLACDPFEDTPVSTLRHR 244 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP KPLA+M + + + +LL + PIVL +KK + + +AP N Sbjct: 245 KGRPDKPLAIMAESLESAREIALISEEEARLLKSSRRPIVLCEKK-TGSVAESVAPGQNS 303 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 VG+MLP PL HL+L+ + LVMTS N + P NE+AL+ L +ADGFL+HNRDI Sbjct: 304 VGIMLPYTPLHHLILEGM-RALVMTSANPTDSPLISDNEEALSRLAHVADGFLMHNRDIC 362 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 ++DDS+V SG+ MLRR RGYVP+ + L ++P +L GA++K+TF L + Sbjct: 363 MKVDDSLVALSGDRTVMLRRGRGYVPNPIDLSI---SMPHILAAGAEMKSTFSLTQEGLI 419 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT- 472 SQ+LGD +R+ L +Y+ P+ + +DAHP Y+S+Q A + + Sbjct: 420 FPSQYLGDAKQMDTLGYYRQTLDHFTELYNIRPKALAYDAHPLYLSTQTALKALGEVERS 479 Query: 473 --VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAH AACLAE+ I + +DG G G +G +WGGE L ++ LG Sbjct: 480 MAVQHHHAHLAACLAEYDI---NEPTIGVIMDGTGYGSDGTIWGGEFLLGDWSGYRRLGH 536 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 LPGGD + +PWR L+ + E + E + + Q+ ++ ++PL Sbjct: 537 FKTAGLPGGDRSVLEPWRYSLSLLTEALGEEEAIKEASRIWQERSEKAKIIVKTMNSSPL 596 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL--DLA 648 SSCGR FD V+A LG +SY+G+AA LEA ++ + + + ++ + D Sbjct: 597 TSSCGRLFDGVSAILG-GRDRVSYDGQAAMELEARSSYTDEIPVDMGIWNDEDGIILDWR 655 Query: 649 TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 F + + + ++Q AFH +LA+ + + A G+ + SGGV NR+L + Sbjct: 656 PFIRWLVEEKPTLDQGGSAFHASLAKSISEICTNIAKDTGVKKVALSGGVWQNRMLLRQT 715 Query: 709 AHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 L F++L + L D +S+GQ IA RW Sbjct: 716 VVRLEGRGFSVLTHRRLSPNDESVSVGQAAIAGWRW 751 >UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABW2_CARHZ Length = 754 Score = 923 bits (2386), Expect = 0.0, Method: Composition-based stats. Identities = 264/758 (34%), Positives = 395/758 (52%), Gaps = 36/758 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLY 62 ++ + G VQG+GFRPF+W++A++ + G V N GVE+ + E FL + Sbjct: 2 KVAKKIVVSGLVQGIGFRPFIWRIARKWEIKGWVKNSLAGVEILAEGEEENVNKFLAAIK 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGE 121 + PPLA I+ + P S F I +S IVP D C CL E+ + Sbjct: 62 KEKPPLAVIEKISVIPLNLSGNFETFEIIESQRDRKGVLIVPADLPVCGDCLQELRDSSD 121 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY+YPFINCT+CGPR+TII +PYDRP T M FPLCP C KEYR+P DRRFHA+PVAC Sbjct: 122 RRYQYPFINCTNCGPRYTIIEKLPYDRPHTSMKIFPLCPECAKEYRNPEDRRFHAEPVAC 181 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P CGP L ++ A+ + LK G IVA+KG+GG+HLA D N V L Sbjct: 182 PACGPRLFLYDKEKNLLAKDGEVIHKTQELLKKGFIVALKGLGGYHLAADPFNVKTVLLL 241 Query: 240 RARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHR AKP A+M+ + A +LLT+ PIVL KK ++ +++PD Sbjct: 242 RQRKHREAKPFALMVKNLTVAKKHVYISKAEEKLLTSNVCPIVLCRKKKSSKIVKEVSPD 301 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + +G+MLP P +LLL+ + L+MTS NLS +P +++ L+ IAD F+++NR Sbjct: 302 NDYLGIMLPYTPFHYLLLEHFE-ALIMTSANLSEEPIVYQDDEVFLKLKDIADFFVVNNR 360 Query: 354 DIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I++ +DDSV ++S +LRR+RG P L + + +L LG LKN+F + + Sbjct: 361 PILRPVDDSVAMVYKKSPVILRRARGLAPLPLKVRGMKEG---ILALGGQLKNSFAITKD 417 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE--MNL 468 LSQ+ GDL + ++ + + + ++FTPQ V +D HPGY SS+ E L Sbjct: 418 NYVYLSQYFGDLDNLPSRLAYMKGIDDFCRFFEFTPQIVAYDLHPGYFSSELVEEKYSKL 477 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV-NYRECEH 527 + HH AH AA +AE + + + DG G GE+G +WGGE + + Sbjct: 478 KKCPIQHHKAHLAAVVAEKRIK---APFMGVIFDGTGYGEDGMIWGGEFFVAFTPEDYQR 534 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L L GD A K+PW++ L+ + N +++ + + + Sbjct: 535 IAHLKYFPLLDGDEAIKKPWKSALSLLNEVQVDVANLI-FQDIERMELEFAQKRLAKQ-- 591 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM--PRVDNQL 645 SS GR FD ++A LG T+SYEG+AA LE +A + T+ ++ ++ Sbjct: 592 KIFTSSVGRLFDGISALLGL-KTTISYEGQAAILLETIADRSERGCYDFTILQEKIPYEI 650 Query: 646 DLATFWQQWL-NWQAPVNQ--RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 D L + + VN+ + FH+ + + A L + GI ++ +GGV NR Sbjct: 651 DFRPLLLDVLADLKKGVNKKVISGKFHNTIVEMIAGLGKIVNKQYGIQKVILAGGVFQNR 710 Query: 703 LLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 +L + L + P +P D G++LGQ +A Sbjct: 711 VLLEKTFISLKRLGLKPIIPSYIPINDQGIALGQAYLA 748 >UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A573_RHILW Length = 784 Score = 921 bits (2381), Expect = 0.0, Method: Composition-based stats. Identities = 293/774 (37%), Positives = 405/774 (52%), Gaps = 43/774 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 +++R++G VQGVGFRPFV+ LA + L G V ND GV + ++ E F+ L Sbjct: 11 ALEVRVQGIVQGVGFRPFVYTLANRYELSGWVANDTTGVTISVQGPHASVEAFMEDLTCK 70 Query: 65 CPPLARIDSVEREPFIWSQLPT--EFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGE 121 P ARIDSV+ P FTIRQS+ G NT I PD CP C AE+ P Sbjct: 71 LPTAARIDSVDVRSRQACIPPASPHFTIRQSSVTGQKNTLITPDLHVCPDCEAELFDPNN 130 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCT+CGPR++II PYDRP T M+ F +CPAC EYR+PLDRR+HAQP+AC Sbjct: 131 RRYRYPFINCTNCGPRYSIILDTPYDRPNTTMSRFQMCPACLAEYRNPLDRRYHAQPIAC 190 Query: 182 PECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 +CGP L G+ E A++AA +L G+I+A+KGIGGFHL D RN AVATLR Sbjct: 191 GDCGPTLRLTDTAGQPIPAEDAIEAARDRLADGQILAVKGIGGFHLIVDPRNPAAVATLR 250 Query: 241 ARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +RK R KPLA+M ++ + L + PIVL+DK L D++ Sbjct: 251 SRKRRYKKPLALMCRDSETASKFVSMGAFEKATLESAPRPIVLLDKLAPNPLAPDVSAGT 310 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + G+ML P+ HLLL L++TS NLS P N++A+ +L IAD FL+H+RD Sbjct: 311 MQHGMMLAYTPIHHLLLDGRFDALIVTSANLSDDPIEFRNDEAIENLSAIADAFLVHDRD 370 Query: 355 IVQRMDDSVVRE--------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 I R+DDSV+ +RR+RGY PD + LP +++PP+L LGA+LKNT C Sbjct: 371 IHARVDDSVLLCWTSDHTGPKTMPVRRARGYAPDFVPLP---QSLPPILALGAELKNTIC 427 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 + RG QA LS H+GDL + + + + + TP+ +V D HP ++S+++A Sbjct: 428 VNRGNQAFLSPHVGDLKRGKVLTAFHQTIAETVRQHGVTPELMVCDLHPQFLSTEYANSQ 487 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +LP V HHHAH AA + E+ I + DG G+GE+G WGGE +Y Sbjct: 488 SDLPILQVQHHHAHMAAVMGENGL--CDRPTIGVVFDGFGLGEDGNNWGGEFFVGSYASV 545 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAI 582 + +G LPGGD A ++ R + E + + ++ +L I Sbjct: 546 QRVGHFSNFKLPGGDRATREIDRIAIGFLFDLYGENAFNLDLPVMRTRPEEELRILQTMI 605 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC---HGVTHPVTMP 639 R + PL SS GR FDAVAA G + YE +AA LEALA PV + Sbjct: 606 GRSVRTPLTSSVGRLFDAVAALTGVRSE-IQYEAQAAIELEALAGRGGFRRDACLPVVLR 664 Query: 640 RVDNQ---LDLATFWQQWLNWQA----PVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 +D + + + + FH + + GI+ + Sbjct: 665 SDSQGRILVDTHALMAEIAQLAVLPVKSLQEISHRFHATVVLSICEVCGRLRDRFGISNV 724 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 V SGGV NR + ++ LA F + + L GDGG+S GQ ++ L Sbjct: 725 VLSGGVFLNRFILSQTTDELARRGFDVFSHRQLSPGDGGISYGQLLVGGYSLLD 778 >UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clostridium acetobutylicum RepID=Q97KV6_CLOAB Length = 762 Score = 920 bits (2379), Expect = 0.0, Method: Composition-based stats. Identities = 257/758 (33%), Positives = 382/758 (50%), Gaps = 35/758 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQ 63 + L+I G VQGVGFRPFV++ A L L G V N+ GV + + + F+ +L Sbjct: 3 KRLLLKIEGIVQGVGFRPFVYRQASLLGLKGWVSNNSAGVYIDVEGESSNLYEFIDKLKY 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGER 122 P L RI+++ E F I++S T I PD C C+ ++ P + Sbjct: 63 DKPFLCRIENIAIEEKTAVN-YRSFKIKRSEDKYNKTTLISPDIGICEKCIEDITNPSSK 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY+YPF +CT+CGPRF+I++A+PYDR T M F LC ACDKEY D +RRF+A+ +C Sbjct: 122 RYKYPFASCTNCGPRFSILKAIPYDRKNTTMNKFKLCSACDKEYNDYNNRRFYAETNSCK 181 Query: 183 ECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGPH+ +H E + L +LK GKI AIKG+GGF L CDA N A+ LR Sbjct: 182 ICGPHIWIENHNGVKIEVDDELNWTRKKLKEGKIFAIKGLGGFQLVCDAENEEAIKKLRQ 241 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 +K+R KP AVM+ + + +LL + PIV++++ ++ IAP Sbjct: 242 KKNRQHKPFAVMVKDIETAKKYCSVNYKEEKLLKSKVKPIVILNRSNYNKIPKVIAPYQK 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVMLP PL +LL + L+MTS N G P NE A+ L IAD FL HNRDI Sbjct: 302 TLGVMLPYTPLHYLLFSDDIEVLIMTSANAHGLPLEYKNESAIDKLGNIADYFLQHNRDI 361 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 +DDS+VR ++RR+RGY P+ + NV +L G+++KNTFC+ + Sbjct: 362 NVPIDDSIVRVVNGQECVIRRARGYTPNPI----KSDNVREILACGSNMKNTFCIAKNNF 417 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 LSQ+ GDL + ++ +R + I+ FTP Y+ D HP Y+S + LP Sbjct: 418 MFLSQYNGDLENVETIDRYINNIRHFEKIFKFTPGYIACDMHPNYLSIIYDNYSKLPKIE 477 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HHHAH +CL E++ G VI + DG G G + +WGGE + ++ L L Sbjct: 478 VQHHHAHIVSCLTENKVK---GKVIGIAYDGTGYGTDKKVWGGEFFICDTKKFIRLAHLK 534 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQQNWSVLARAIERGIN 587 V +PG ++A ++ WR +A E + + L I+ IN Sbjct: 535 YVKMPGAEMAIRENWRMAVAYIYSVFESGKYNEKHLLKTIMKLYGEKAIKLIDIIKANIN 594 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ--L 645 P SS GR FDA A+ +G ++YEG+AA LEA+ + + D+ + Sbjct: 595 CPETSSMGRLFDAAASLIGVRD-NITYEGQAASELEAVIELKCKQYYEYDIRFKDDNYII 653 Query: 646 DLATFWQQWLNWQAP---VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 + + + + + + + FH+ + + + + I + SGGV N Sbjct: 654 EGDKVIKGIIQDKISGVTMGEMSSKFHNTVVEFSKDVCKLLRKKTAINQVALSGGVFQNS 713 Query: 703 LLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 L L L F + + +P DGG++LGQ ++A Sbjct: 714 YLLKNLVDSLKKEAFIVYTNKEIPTNDGGIALGQIIVA 751 >UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAU9_SULNB Length = 740 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 274/751 (36%), Positives = 379/751 (50%), Gaps = 41/751 (5%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHC 65 ++ I G VQGVGFRPF++ LA + NL G V N GVE+ + D + FL + Sbjct: 4 YKIEIEGTVQGVGFRPFIYSLAARFNLKGSVLNGTQGVEIVINATSADLDNFLQAIKNEL 63 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA ID + Q I GG +I PD + C AC E+ P +RRY Sbjct: 64 PPLASIDHIRTTELPLEQFQDFQIIATEDGGEKTVRIPPDVSICKACEKELFDPTDRRYG 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFI CTHCG R++II +PYDR T M F +C C KEY DPLDRR+HAQP+ C +CG Sbjct: 124 YPFITCTHCGVRYSIIYDLPYDRKNTSMKFFEMCEMCTKEYNDPLDRRYHAQPIGCYQCG 183 Query: 186 PHLEWVSHGEHA---EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 P L + + A ++ + A L G I+A+KG+GG+HL CDA N AVA LR R Sbjct: 184 PGLSLLDNQCSALSVKRSEIIDMASQLLLDGNILAVKGVGGYHLMCDATNEEAVAKLRER 243 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP+KP AVM+ D + LL + PIVL++ K L +AP+++ Sbjct: 244 KRRPSKPFAVMVKNMDMAHQLAVISSKEEALLESKERPIVLLNAKRQT-LNAHVAPNISR 302 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ LP PL LLL L PLV TS N++ +P E L L + D L HNR IV Sbjct: 303 IGLFLPYTPLHLLLLHTLNRPLVATSANVTDEPICTDRES-LEKLSDVYDYVLDHNRKIV 361 Query: 357 QRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 DDS VVRE LRR+RGY P ++ LP FK VL +GA+ K+T + +Q Sbjct: 362 NGCDDSVVMVVREQKVTLRRARGYAPSSVKLP--FKLSKRVLSMGANQKSTVAIGFDDQV 419 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN-----L 468 +LS H+GDL G +++ + ++ IY F P+ +VHD HP Y S++ A ++ L Sbjct: 420 ILSPHIGDLDSIGSVEYYKKNIGTLERIYGFEPEVIVHDKHPQYESTKVALSLSAQRSTL 479 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HH+AH +AE G V+ + DG G G++G LWGGE L +Y E + Sbjct: 480 NAVAVQHHYAHILGVMAEKGIE---GKVLGVAFDGTGYGDDGNLWGGEFLVCDYEGYERV 536 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAIERG 585 L L GG A K+P R L+ + + + A E+G Sbjct: 537 AHLNYFKLLGGAKAIKEPRRMALSLLFELYGKEALALQHPVLDAFSPSELRTYYIAWEKG 596 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +N PL+SS GR FDAVA+ +S+EGE+ LE L +P D ++ Sbjct: 597 LNGPLSSSAGRLFDAVASLTDVC-HVMSFEGESGMLLEELYDGSVEGYYPFGYD--DGRI 653 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D+ ++ + + FH L + + G+ LV SGGV NR+L Sbjct: 654 DILPMIKEIVKESDRTVAVSKFFH-TLVEIIMTI----HKAFGL-PLVLSGGVFQNRILL 707 Query: 706 ARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 + + D + F P DGG++LGQ Sbjct: 708 NLMMERVPD--IYFLNRFPPNDGGIALGQAA 736 >UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B9L1W3_THERP Length = 758 Score = 916 bits (2369), Expect = 0.0, Method: Composition-based stats. Identities = 299/750 (39%), Positives = 409/750 (54%), Gaps = 36/750 (4%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 +R+ G VQGVGFRPFV++LA +L L G V N GVE+ + TFL +L + Sbjct: 12 AWSIRVTGVVQGVGFRPFVYRLATRLGLGGWVLNTEQGVEIVVEGPEPALATFLSELESN 71 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERR 123 PP ARI S+ + +FTIR+S G T++ PD ATC ACL E+ P +RR Sbjct: 72 PPPAARIASLSVQQ-TRPIGFAQFTIRESAQGDRPTTRVSPDLATCDACLRELFDPADRR 130 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YP+INCT+CGPR++II ++PYDRP T M + LCP CD+EY DP DRRFHAQP+ACP Sbjct: 131 FHYPYINCTNCGPRYSIILSLPYDRPRTTMKDWSLCPDCDREYHDPGDRRFHAQPIACPL 190 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + + A E A++ A + L GKI+A+KGIGG+HLACDARN+ AV LR Sbjct: 191 CGPQYQLCTATGQLVARGEDAVRLAASWLVAGKILAVKGIGGYHLACDARNAAAVWALRE 250 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK R KP A+M+ D L DAA LL +PA PI+L+ + +AP+ Sbjct: 251 RKFRKEKPFALMVRDLDTAAQLVELDDAASALLGSPARPILLLPARIE---LPGVAPENR 307 Query: 296 EVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + G+MLP PL +LL P LVMTS N S +P A ++ A A L GIAD FL+ R Sbjct: 308 DFGIMLPYAPLHYLLFA-FGAPAVLVMTSANRSDEPIAFCDDDAFARLSGIADAFLVGER 366 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I +R+DDSV+R ++RR+RG P +A P P+L +GADLKNT LV Sbjct: 367 PIARRIDDSVIRHGPSGSILVRRARGLAPAVVATLP---TTRPILAVGADLKNTVTLVVA 423 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQWAREMNL 468 QA +SQH+GDL + + +R + +Y+ +VHDAHP YVS++ A+E+ Sbjct: 424 GQAFVSQHIGDLEHWPVVEAFSTTIRDLCAMYEVNLDEALIVHDAHPEYVSTRLAQELPG 483 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY-RECEH 527 V HH AH A+ LAEH+ D V+ DG G G++ ++WGGE + Sbjct: 484 THVAVQHHRAHIASVLAEHECWDDS--VVGFAFDGTGYGDDSSIWGGEVFVGSLVGGLRR 541 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L V LPGGD AA+ P A L +PE + + + + + R + Sbjct: 542 VASLRPVLLPGGDAAARWPV-QAAAGFLAMLPELPDLHASPFAFPKRYDEACTVLRRRVR 600 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDL 647 +S GR FD VAA G +++EG+AA LE LA V P P V+++LD Sbjct: 601 CHPTTSMGRLFDTVAALCGFT-RPITFEGQAAIWLEHLARQAGEVA-PYPFPFVNHELDF 658 Query: 648 ATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 + + A AFH+A+A ++ GI +V SGGV N LL Sbjct: 659 RPLLAAVIRDRQRGRDIAAIARAFHEAVAHAICSVAAYCREAYGIRHVVLSGGVFQNMLL 718 Query: 705 RARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 R+ L T+ + +P DGG+SLGQ Sbjct: 719 LTRVQQLLGQTTVWVNRMVPPNDGGISLGQ 748 >UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacteraceae RepID=HYPF_RHOCA Length = 739 Score = 914 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 335/746 (44%), Positives = 435/746 (58%), Gaps = 21/746 (2%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCP 66 ++R+RG+VQGVGFRPFVWQLA+ L G V ND +GV +R+ D F L P Sbjct: 2 QAWRIRVRGQVQGVGFRPFVWQLARARGLRGVVLNDAEGVLIRVAGDLGDFAAALRDQAP 61 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLAR+D+VE + LP F I S T++ PDAATCP CLAE+ G RR Y Sbjct: 62 PLARVDAVEVTAAVCDDLPEGFQIAASGAAGAETRVTPDAATCPDCLAEIRGEG-RRRGY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F NCTHCGPRF+I++++PYDR T MA F +CPAC EY DP DRRFHAQP+ACP+CGP Sbjct: 121 AFTNCTHCGPRFSILQSLPYDRARTTMAPFAMCPACRAEYEDPADRRFHAQPIACPDCGP 180 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L W+ G A+ A A+LK G+I+A+KG+GGFHLACDA N++AV LRARK RP Sbjct: 181 RL-WLEAGGAELPGDAIGLAAARLKAGEILAVKGLGGFHLACDATNADAVDLLRARKRRP 239 Query: 247 AKPLAVMLPVAD-----GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 AKP A+M D + AA L PAAPIVL+ + L + +AP + E+GVML Sbjct: 240 AKPFALMAREEDLARIVAVSPAALAALRDPAAPIVLMPARG--SLPETLAPGMAELGVML 297 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P PL HLLL LVMTSGNLSG P I N++A L AD FL+H+R I +R+DD Sbjct: 298 PYTPLHHLLLDAFGGVLVMTSGNLSGAPQVIGNDEAREKLSAFADAFLMHDRAIARRLDD 357 Query: 362 SVVRESGEML-RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 SVVR M+ RR+RG VP L LPPGF+ P ++ G +K CL++ QA+L HLG Sbjct: 358 SVVRVDPPMVLRRARGQVPGTLPLPPGFETAPQIVAYGGQMKAALCLIKTGQALLGHHLG 417 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHH 476 +L + + +A ++D PQ V D HP + +S+ A + +P V HH Sbjct: 418 ELDEALTWEAFLQADADYAALFDHRPQAVAVDLHPDFRASRHGAARAGRLGVPLIAVQHH 477 Query: 477 HAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVAL 536 HAH AACL E+ WP DGG V + LDG+G+G +G +WGGE L +Y+ E + L L Sbjct: 478 HAHLAACLGENLWPKDGGKVAVIVLDGLGLGPDGTVWGGELLLGDYKGFERVAWLKPAPL 537 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGR 596 GGD A +PWRN L + + ++ + + +GINAPL+SS GR Sbjct: 538 IGGDRAQIEPWRNALVRL--DAAGLSDLADRL-FPAAPRDLARQLAAKGINAPLSSSAGR 594 Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN 656 FDAVAA LG P SYEGEAA LE+LAA V +P V +D A +Q L Sbjct: 595 LFDAVAACLGICPMRQSYEGEAAMRLESLAADTGPVP---DLPCVGGAIDPAPLFQ-LLA 650 Query: 657 WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT 716 ++ A A H +LAQ FAA R + +GG N L ++LAD Sbjct: 651 AGERPDRVAHALHASLAQAFAAEARRLIEAGQAEAVALTGGCFQNSRLATMTRNFLADQG 710 Query: 717 LLFPQSLPAGDGGLSLGQGVIAAARW 742 +L +PA DGGL+LGQ ++AAA+ Sbjct: 711 ILTQGRIPANDGGLALGQALVAAAKL 736 >UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q1_SLAHD Length = 785 Score = 914 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 288/780 (36%), Positives = 399/780 (51%), Gaps = 59/780 (7%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 + + + G VQGVGFRPFV++ A++ + G V N GV + + + +F+++L ++ Sbjct: 4 ALDIEVHGVVQGVGFRPFVYKAARRNLISGWVLNATSGVFIHAEGESDHVNSFVMELSEN 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM--NTQIVPDAATCPACLAEMNTPGER 122 P A + + + + T F IR S + T + PD ATC C+AE+ P R Sbjct: 64 APAAANVKEILLKEVPL-EGFTTFEIRFSEEEDVPETTLVSPDLATCDDCVAELFDPANR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFINCT+CGPRFTII +PYDR T MA FP+CP C +EY DP DRRFHAQP AC Sbjct: 123 RYHYPFINCTNCGPRFTIINGLPYDRAATSMAGFPMCPDCAREYADPEDRRFHAQPDACF 182 Query: 183 ECGPHLEWVSHG--------EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 +CGPH+ W + G + A +A ++ A L+ G+I+AIKG+GGFHLACDA N Sbjct: 183 DCGPHIYWRASGSDEREWGLDLASSDAIVERAAQCLRQGRILAIKGLGGFHLACDAANPE 242 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCD 288 A+A LR RK R K AVM+P D + A LLT PIVL+ K+ Sbjct: 243 ALAELRRRKRREGKAFAVMVPNLDAVRAVCHVSKAEEDLLTGSVRPIVLLKKRAEATFAP 302 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 + L E+G+MLP PLQHLLL LVMTSGNL +P +E+A A L GIAD F Sbjct: 303 GLCDKLPELGIMLPYTPLQHLLLAAFGGMLVMTSGNLHDEPIQTDDEEAFAKLGGIADAF 362 Query: 349 LIHNRDIVQRMDDSVVR--------ESGEMLRRSRGYVPDALALP---PGFKNVPPVLCL 397 + ++R IV R DDSVVR ++ +M+RR+RGY P + L + + V Sbjct: 363 IGNDRPIVTRFDDSVVRVIQVGTAGDALQMVRRARGYAPMPVPLKRHAAEGQKLDTVFAA 422 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G + KNTFCL+RGE A +SQH+GD+ + W +A + ++ TP + +D HP Y Sbjct: 423 GPEQKNTFCLLRGEDAFVSQHIGDMENAETFDAWLDAKARFERLFQATPDRIAYDLHPEY 482 Query: 458 VSSQWAREMNLPTQ---TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWG 514 ++S+WA E V HHHAH + +AE+ VI + DG G G +G +WG Sbjct: 483 LASKWALEQAAAGAAAEPVQHHHAHIVSVMAENDLT---DAVIGVAFDGTGYGVDGRIWG 539 Query: 515 GECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQ 573 GE + N ++ E V +PGG A K P R + + E Q Sbjct: 540 GEVMMANRQDFERFANFAYVPMPGGAAAVKHPDRMAYGFLWTYDLLEHPAAQPMLEAMGQ 599 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 + I+RG+N P+ SS GR FDA++A G L YEGEAA EA A + Sbjct: 600 QAELCGTMIDRGLNTPMTSSVGRMFDALSAICGVCTEPL-YEGEAAILFEA-AMNGVQTD 657 Query: 634 HPVTMPRVDNQ--------------LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGF 676 + V N D ++ L+ V + H+AL Sbjct: 658 EAYAIDVVKNTAGEGSTAHNTSVVLFDAEPLFRGVLDDLAAGVGVETISAKAHNALVAAV 717 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 + G++T+ +GGV NR L L A FT+ + LP DGG++ GQ Sbjct: 718 LQICLVANAAYGVSTVALAGGVFMNRYLIEHTTAALESAGFTIAINRELPPNDGGIAYGQ 777 >UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=Campylobacterales RepID=A8EUQ4_ARCB4 Length = 749 Score = 914 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 243/754 (32%), Positives = 381/754 (50%), Gaps = 39/754 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 ++ I G VQGVGFRPF++ LA + ++ G V ND +GVE+ +E+ E F+ ++ + P Sbjct: 6 KISIFGIVQGVGFRPFIYNLAIKYDIKGWVKNDENGVEIEAYSTQENIENFINEIKSNPP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERRYR 125 LA+I +++ E + F I QS+ T I PD A C C+ ++N G RY Sbjct: 66 VLAKITNIKIEKNNQIKEYKNFEIIQSSSSKDKTTIISPDIAICDDCIKDVNDIGNFRYN 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y NCT+CGPR++II+ +PYDR T M F LC C+ EY++PL+RR+HAQPVAC +CG Sbjct: 126 YSLTNCTNCGPRYSIIKTVPYDRANTSMNEFKLCKKCEDEYKNPLNRRYHAQPVACEDCG 185 Query: 186 PHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P++ +++ + A++ +K G ++A+KGIGGFH+ CDA N V LR K Sbjct: 186 PNMTLYNINNSILSYNIKAIEQTANLIKDGYVIAVKGIGGFHIVCDATNDKVVNKLREIK 245 Query: 244 HRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 +RP KP AVM + + ++LT+ PIVLV K+ L IAP+++++ Sbjct: 246 NRPNKPFAVMFNNINSIKQYTNMNYQEEEILTSKEKPIVLVKKRPNTNLSSYIAPNISKL 305 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G + + HLL + LQ P+V TS NL +P S ++ + L I D L +NRDIV Sbjct: 306 GCFIANCGIHHLLFKYLQNPIVATSANLKDEPIIRSKDEIIGKLGNIVDFVLDYNRDIVN 365 Query: 358 RMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 DDS+++ LR +RGY P + + KN VLCLGA+ K+T L + Sbjct: 366 SSDDSIIQNVENYKIKLRNARGYAPTHIKIEKDLKN--KVLCLGANQKSTIALGFKNNFI 423 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-----NLP 469 LS ++GDL+ + + +N YDF P VV D HP Y S+++A ++ N+ Sbjct: 424 LSPYIGDLNSISSMEYFNRTINSFKNFYDFVPDTVVCDLHPKYESTKYAFKLLQDNPNIK 483 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AH + +AE+ +V+ DG G G++G +WGGE + +E + + Sbjct: 484 LIQVQHHYAHILSVMAENGLE---DEVLGFAFDGTGYGDDGNIWGGEVFIASRKEYKRIN 540 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE----TASVQQQNWSVLARAIERG 585 + L GG++A K+P R L+ + + + ++ L ++G Sbjct: 541 HIKYFRLLGGEMAIKEPKRVALSLLFDIFTLDEILALDSFVVKAFSKEEIKTLYTMWQKG 600 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +NAP SS GR FDA+++ T ++EGE +E + + +D + Sbjct: 601 LNAPFCSSIGRLFDAISSFANIL-HTQTFEGETGLLIEENYDNSIKDNYEY--KILDENI 657 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D+ Q + + + F + L + + +VFSGGV N+ L Sbjct: 658 DITPMISQIIEDKDK-KVISSKFINTLVNIIIEI----SNKDKNLPVVFSGGVFQNKTLL 712 Query: 706 ARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVI 737 L F +P D G+S+GQ Sbjct: 713 ELLIKKFKEQGRVFYFNIDVPTNDEGISIGQLYY 746 >UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteria RepID=HYPF2_RALEH Length = 807 Score = 914 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 316/794 (39%), Positives = 418/794 (52%), Gaps = 75/794 (9%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARI 71 G VQGVGFRPFV++LA++L L G V NDG GV++ + + +L + PPLAR+ Sbjct: 21 GVVQGVGFRPFVYRLARELGLAGWVRNDGAGVDIEAQGSAAALVELRERLRRDAPPLARV 80 Query: 72 DSVEREPFIWSQLPTEFTIRQST--GGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 D + E F I +S+ ++T I D A CP CLAE+ P RRYRY FI Sbjct: 81 DEIGEERCAAQVDADGFAILESSRSDAAVHTAIGHDTAVCPDCLAELFDPANRRYRYAFI 140 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 NCT CGPR+T+ A+PYDR T MA FP C C EY P RRFHA+P ACP+CGP L Sbjct: 141 NCTQCGPRYTLTWALPYDRATTSMAPFPQCRPCLDEYNAPEHRRFHAEPNACPDCGPSLA 200 Query: 190 WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 ++ E + +A+L+ G+IVAIKG+GGFHLACDA N++AVA LR+RK R K Sbjct: 201 LLNAQGMPVEDVDPIAETVARLQRGEIVAIKGLGGFHLACDAHNADAVARLRSRKQREEK 260 Query: 249 PLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKY-VPELCDDIAPDLNEVGVML 301 P AVM+ + LLT PIVL+ K+ V +AP L +GVML Sbjct: 261 PFAVMVANLATAAQWGDIGSGEAALLTASERPIVLLRKRSGVDGRFAGVAPGLVWLGVML 320 Query: 302 PANPLQHLLLQEL-QCP-------------LVMTSGNLSGKPPAISNEQALADLQGIADG 347 P PLQ+LL E P LVMTS N G+P N++A L GIAD Sbjct: 321 PYTPLQYLLFHEAAGRPEGLGWLAQPQSLVLVMTSANPGGEPLVTGNDEAAQRLTGIADA 380 Query: 348 FLIHNRDIVQRMDDSVVRESG------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 FL+H+R+I+ R DDSVVR G + +RR+RGY P A+ L ++ P VL LG Sbjct: 381 FLLHDREILVRCDDSVVRGDGEPAPHVQFIRRARGYTPRAIKLA---RSGPSVLALGGSF 437 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNT CL RG++A +SQH+GDL + EA+ +Q + + PQ V HD HP + S++ Sbjct: 438 KNTVCLTRGDEAFVSQHVGDLGNAATCEALIEAVAHLQRVLEIRPQLVAHDLHPDFFSTR 497 Query: 462 WAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 A E+ +P V HHHAH AA LAEH I L LDG+G+G++G WGGE Sbjct: 498 HAAELAAQWGVPAVAVQHHHAHIAAVLAEHG---SDEPAIGLALDGVGLGDDGQAWGGEL 554 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L V+ C+ LG L + LPGGD AA++PWR A E +Q + Sbjct: 555 LLVDGGACKRLGHLRELPLPGGDRAAREPWRMAAAALHAMGR--GEEIEGRFPRQPGAPM 612 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 + R + + +NAPL+SS GR+FDA A LG T++YEG+AA LE LA S P Sbjct: 613 VNRMLAQRLNAPLSSSMGRWFDAAAGLLG-TRETMAYEGQAAMLLEGLAESWGEQPSPGR 671 Query: 638 MPRVDNQLD--------------LATFWQ-------------QWLNWQAPVNQRAWAFHD 670 V + L L W+ + L+ + + A FH Sbjct: 672 PKTVAHSLGGVPRSGGGTYKALALPDAWRIDAGNTLDLLPLLEALSAETNAARGAAQFHA 731 Query: 671 ALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDG 728 L A + G+ T+VF GG N +L L LA T+L + LP DG Sbjct: 732 TLVAALEAWTVATVQVTGVRTVVFGGGCFLNHILARNLCRRLAARGLTVLTARQLPPNDG 791 Query: 729 GLSLGQGVIAAARW 742 G++LGQ +A R Sbjct: 792 GIALGQVWVALQRA 805 >UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LXR8_CLOB8 Length = 766 Score = 912 bits (2357), Expect = 0.0, Method: Composition-based stats. Identities = 266/767 (34%), Positives = 404/767 (52%), Gaps = 47/767 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCPP 67 ++I G VQGVGFRPFV++ A+ + G V N G V + RE+ + F+ + + P Sbjct: 5 IKIYGIVQGVGFRPFVYEKARDFKIRGSVQNIGGAVVIDCLGERENIKRFMFNVIKRPPS 64 Query: 68 LARIDSVER----------------EPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCP 110 +A+I+ VE E I + +F I++S + PD A C Sbjct: 65 IAKIERVECTLIKKDLSTISCLDENEFIIKENIDKKFVIKESAEQKNEMRFVSPDIAVCD 124 Query: 111 ACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPL 170 CL ++ + G RY+Y F NCT CGPR++II+A+PYDR T M F +C C EY +PL Sbjct: 125 ECLEDIRSKGNLRYKYAFTNCTQCGPRYSIIKALPYDRQNTTMKEFYMCEECKDEYENPL 184 Query: 171 DRRFHAQPVACPECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACD 229 RRFHAQP C +CGP L ++ G+ + E ++ I+ ++ GKI+AIKGIGGFHL CD Sbjct: 185 SRRFHAQPNCCEKCGPKLFLTNNRGDQVKCEDPIKETISLIEEGKILAIKGIGGFHLVCD 244 Query: 230 ARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV 283 RN A+ LR+RK R KPLA+M + D +++++ PIV++ KKY Sbjct: 245 GRNEQAINLLRSRKQRKDKPLALMAKDIGVIKEICYISDKEEEVISSNKRPIVILKKKYP 304 Query: 284 PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 L + IAP N +GVMLP PL +LL E LVMTSGN+S P NE+AL L Sbjct: 305 FVLPEAIAPKQNSLGVMLPYTPLHYLLFNEKLDLLVMTSGNISSMPMEYKNEEALKHLNT 364 Query: 344 IADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 +AD FL+++R I ++DDSVV+ G+ ++R SRGY P +L + ++ +G Sbjct: 365 VADYFLMNDRAIYVQVDDSVVKVIGQVEKVIRGSRGYRPYSLKAGVKNE----IIAVGGQ 420 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 K+T C+ + A LSQ+LGDL + ++ L+ + N++D + +D HP Y S+ Sbjct: 421 QKSTICVSKNGYAYLSQYLGDLGEFNCYKNFKYVLKHICNLFDINSDVLAYDMHPAYSST 480 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 ++A+E + V HHHAH +C+AEH VI + DG G G +GA+WGGE L Sbjct: 481 KYAKEKKMRKIEVQHHHAHMVSCMAEHSIY---DSVIGIIFDGTGFGLDGAVWGGEFLVG 537 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 N R + G L V L GG+ A K+PWR + + + V + V+ + Sbjct: 538 NRRVFKRAGQLKYVNLQGGEQAIKEPWRCASSYLYALGYDPEKI--IQGVDNEKIKVVKQ 595 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 A++ IN ++SS GR FD VAA G ++SY+G+AA LE + ++ + Sbjct: 596 ALDSKINCFVSSSVGRLFDTVAALCGIR-NSISYDGQAAIELENIIDYKIKESYSWDIKE 654 Query: 641 VDN--QLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + + + + L + +++ + FH++L + L+ + I +V S Sbjct: 655 ENGIFNIQYKSIIEGILGDIQKKELISKISSKFHNSLIKASCDLVCKLREKEHIDKVVLS 714 Query: 696 GGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 GGV N L + L F + + + +P D G+S GQ +A A Sbjct: 715 GGVFENHYLLKGIYVNLIKQGFKVFYNEQIPTNDEGISFGQLHVANA 761 >UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory protein n=6 Tax=Euryarchaeota RepID=Q8U3B1_PYRFU Length = 779 Score = 911 bits (2355), Expect = 0.0, Method: Composition-based stats. Identities = 288/775 (37%), Positives = 401/775 (51%), Gaps = 48/775 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLR---EDPETFLVQLY 62 ++ ++G VQ VGFRPFV+++A NL G V N GD GVE+ + ED E F+ LY Sbjct: 8 KAYRIHVQGIVQAVGFRPFVYRIAHAHNLRGYVRNLGDAGVEIVVEGREEDIEAFIKDLY 67 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNTP 119 + PPLARID VERE F I +S+ G ++ I PD A C CL E+ P Sbjct: 68 KKKPPLARIDKVEREEIPLQGFDR-FYIEKSSTEKKGEGDSIIPPDIAICEDCLRELFNP 126 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 ++RY YPFI CT+CGPRFTII +PYDR T M FP+C C EY DPL+RR+HA+PV Sbjct: 127 TDKRYMYPFIVCTNCGPRFTIIEDLPYDRENTAMREFPMCEFCRSEYEDPLNRRYHAEPV 186 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 ACP CGP + + L+ A + G IVAIKGIGG HLACDA + VA L Sbjct: 187 ACPTCGPSYRLYTSDGNEIIGDPLRKAAKLIDKGYIVAIKGIGGIHLACDATREDVVAEL 246 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R R RP KP A+M + + + LT+ PIV + KK L +++AP Sbjct: 247 RKRIFRPQKPFAIMAKDLETVRTFAYISPEEEEELTSYRRPIVALKKKEPFPLPENLAPG 306 Query: 294 LNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ +GVMLP ++L + P VMTS N G P NE+A L+ +AD L+HN Sbjct: 307 LHTIGVMLPYAGTHYILFHWSKTPVYVMTSANFPGMPMIKDNEEAFEKLRDVADYLLLHN 366 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I R DDSVVR ++RRSRG+VP + +P +K L +GA+L N F +V+ Sbjct: 367 RRIPNRADDSVVRFVDGRRAVIRRSRGFVPLGIEIPFEYKG----LAVGAELMNAFGVVK 422 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP-QYVVHDAHPGYVSSQW----AR 464 + SQ++GD S + REA+R I VV D HP Y +++ A Sbjct: 423 NGKVYPSQYIGDTSKIEVLEFMREAVRHFFKILRVDNLDLVVADLHPSYNTTKLGMEIAE 482 Query: 465 EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 E V HH+AH A+ +AEH +V+ + LDG+G G +G WGGE + ++Y + Sbjct: 483 EFGAEFLQVQHHYAHVASVMAEHNL----EEVVGIALDGVGYGTDGKTWGGEVIYLSYED 538 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQC-LRFVPEW---------QNYSETASVQQQN 574 E L + LPGGDLA+ P R L+ L E N ++ + Sbjct: 539 VERLAHIEYYPLPGGDLASYYPLRALIGILSLNHDLEEVEKIIREFCPNAIKSLKYGETE 598 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH 634 + V+ R + GIN ASS GR DA + L + YEGE A LE+ A Sbjct: 599 FRVIMRQLSSGINVAYASSTGRVLDAFSVLLNVSYRR-HYEGEPAMKLESFAYQGKN-DL 656 Query: 635 PVTMPRVDNQLDLATFWQQWLNWQAPVN--QRAWAFHDALAQGFAALMREQATMRGITTL 692 +T P ++ ++ +++ L N A++ H ALA+ FA + E+A G T+ Sbjct: 657 KLTAPIEGEEIKVSELFEEVLELMGKANPKDIAYSVHLALARAFAEVSVEKAKEFGAKTV 716 Query: 693 VFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAG 745 V GGV +N L+ + + L L +P GD G+++GQ + +L G Sbjct: 717 VLGGGVGYNELIVKTIRKIVEGRGLRFLTTYEVPRGDNGINVGQAFLGGL-YLEG 770 >UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TVE0_SHEHH Length = 795 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 284/796 (35%), Positives = 393/796 (49%), Gaps = 65/796 (8%) Query: 1 MAKN-TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET--- 56 M KN +QL+I G VQGVGFRPFV++LA +LNL G V N+ +GV + + P Sbjct: 1 MTKNLEKSRLQLKITGIVQGVGFRPFVYRLAHELNLTGTVLNNSEGVTIEAQGRPAELAL 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAE 115 F PPLARID++ P F+I S ++ + D TC C + Sbjct: 61 FEAAFSNQAPPLARIDNINVTPLPVIDDCDLFSIVHSEKESLAVVAVSSDKCTCEDCFKD 120 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 +N R +RYPF NCT+CGPR+++I A+PYDRP T MA F +CP C++ Y DP+DRR+H Sbjct: 121 INDINNRHFRYPFTNCTNCGPRYSLINALPYDRPNTAMADFDMCPDCERAYLDPMDRRYH 180 Query: 176 AQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQPV+CP+CGP L + S + +E AL+ AI L GKI+AIKGIGGFHL CDA N+ Sbjct: 181 AQPVSCPKCGPQLSFKSADLTLLSSKETALEDAINSLIEGKILAIKGIGGFHLVCDATNN 240 Query: 234 NAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDK----KYV 283 +V LR RK+RPAKP AVM+ D A Q+L++ PI L+ K Sbjct: 241 QSVELLRQRKNRPAKPFAVMVENIDAAKRLVTGNTAEWQVLSSAERPITLMRKIDAHDVE 300 Query: 284 PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 P L D +AP ++ +G+ LP PL LLL ++ PLVMTS NLSG+P + L Sbjct: 301 PSLSDLVAPQIDRLGIFLPYTPLHQLLLNGVKRPLVMTSANLSGEPIITDSVAINCKLAN 360 Query: 344 IADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 + D L HNR I+ DDSVV+ + ++LR +RGY P + + +L LGA Sbjct: 361 VIDNILDHNRPILNGCDDSVVQVINDKLQVLRLARGYAPLSFYSEQPLE--ESILALGAQ 418 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KN+ C LS H+GDL + + L +Y F +VHD+HP Y +S Sbjct: 419 QKNSICFGIEHNLFLSPHIGDLVSIEAEEYFHHTLNTFSRLYGFKASQLVHDSHPDYATS 478 Query: 461 QWAREMNLP-TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 +WA + T +V HH+AH + +A ++ V+ + DG G+G++ LWGGE LR Sbjct: 479 RWALSQAINNTSSVQHHYAHVLSVMAANKITT---PVLGFSFDGTGLGDDDTLWGGELLR 535 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR-FVPE---WQNYSETASVQQQNW 575 + + + L L AL GG+ A KQP R LL+ L PE + ++ + Sbjct: 536 CDVHQYQRLSHLSTFALIGGEQAIKQPVRILLSILLEKHSPEVIYKLDIPALKALSPTMF 595 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH- 634 + L + + + SS GR FDAVA ALG T YEG+A +E A S + Sbjct: 596 TNLVKLWQTN-TSIKTSSIGRLFDAVAVALGMISDTQ-YEGQAGILIETAANSLSSASEL 653 Query: 635 ---------------------------PVTMPRVDNQLDLATFWQQWLN---WQAPVNQR 664 + + + Q D + Q + R Sbjct: 654 NHFDGQFKLQPLLCPAPETIAEHHEPIRFDIKQSNGQWDSSELLGQIVEQITLMPLTPLR 713 Query: 665 AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQS 722 A A L+ E A T +V GGV NR L R L LL Sbjct: 714 AALIAKAFMDALCNLVCECAKDHLDTPIVLCGGVFQNRYLLERCEKQLNAQGNQLLSSNK 773 Query: 723 LPAGDGGLSLGQGVIA 738 +P D G++LGQ A Sbjct: 774 VPINDAGIALGQLWYA 789 >UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legionella pneumophila RepID=A5IEY4_LEGPC Length = 741 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 290/760 (38%), Positives = 412/760 (54%), Gaps = 50/760 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHCP 66 VQ+ I+G VQGVGFRP V++LA+Q+ L G V N+ GV + ++ + F+ +L + P Sbjct: 5 RVQISIQGLVQGVGFRPCVYKLAKQMELTGFVQNNASGVLIEIQGNYLSQFIPKLREQLP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA I ++E F I S G +NT I PD C CL E+ P R YRY Sbjct: 65 PLAAIHNLEFTSLPIVPNERAFEILDSQQGKINTVITPDVCICSECLGELFDPQSRYYRY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF+NCTHCGPRFTI R +PYDR T M+ FPLC +C +Y +P +RR+HAQP AC +CGP Sbjct: 125 PFLNCTHCGPRFTITRNLPYDRCQTSMSQFPLCQSCQSDYLNPDNRRYHAQPTACSQCGP 184 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L ++ +++ G+I+A+KG+GG+ L CDARN A++ LR RK R Sbjct: 185 QLAL-----------SVDKVAQRIRDGEIIALKGLGGYQLICDARNEGAISQLRLRKSRE 233 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 AKP A+M+ A + AR +L + PIVL+ KK L D IAP LN G+M Sbjct: 234 AKPFALMVVNAKSAEKIAEVSPQARLVLESRERPIVLLRKKKA-LLPDGIAPGLNHFGIM 292 Query: 301 LPANPLQHLLLQ-ELQCP-------------LVMTSGNLSGKPPAISNEQALADLQGIAD 346 LP+ PL +LL L P LV+TS N+ G+P I +++A L IAD Sbjct: 293 LPSTPLHYLLFNSFLGNPDYCQWLDEYHSMVLVVTSANIGGEPLIIDDKKAEQGLISIAD 352 Query: 347 GFLIHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 + H+R+I+ R DDSVVR + +RR+RGYVP L LP +PP + LG LKN Sbjct: 353 KIISHDREIITRTDDSVVRMVNDTSVLIRRARGYVPAPLRLP---YEIPPTVALGGHLKN 409 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 TFC+ RGE+A +SQH+G L++ + E+L + P+ + HD HP + +S+ A Sbjct: 410 TFCITRGEEAFVSQHIGSLNNKATIEYFHESLNHLLKFLAVKPERIAHDWHPDFYTSRLA 469 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 ++ ++P V HHHAH A+ +AEH V+ L LDG G G +G WGGE L + Sbjct: 470 QKYDIPVYGVQHHHAHLASVVAEHGIQ---EPVLGLVLDGYGFGSDGEAWGGELLLLEKA 526 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIE 583 E + +G + PGG+LAA++PWR + S+ Q Q+ L + +E Sbjct: 527 EFKRVGHFFPIPQPGGELAAREPWRMAAGILH-ILGRGDEISQRFKEQPQS-PFLLQLLE 584 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN 643 + I+ PL +SCGR FDAV+A LG + +EG AA LE++ + T+ DN Sbjct: 585 KKIHCPLTTSCGRLFDAVSALLGVEFLSR-FEGHAAMRLESMVTHPQVLNKGWTIN--DN 641 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 D+ Q ++ A FH L G + + +GI L+ SGG N++ Sbjct: 642 VFDMRPTLQ-FIANTTEQQLGANLFHGTLIAGLSEWVTGICREKGIHMLLLSGGCFLNQV 700 Query: 704 LRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L L + L + L P+ LP DGG++LGQ I + Sbjct: 701 LAEGLINSLIKSGIKPLLPKLLPPNDGGIALGQAWIVGIK 740 >UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shewanella RepID=B8CMI9_SHEPW Length = 798 Score = 905 bits (2339), Expect = 0.0, Method: Composition-based stats. Identities = 287/798 (35%), Positives = 397/798 (49%), Gaps = 64/798 (8%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 V+++I G VQGVGFRPFV++LA L L G V N+ +GV + + E F L Sbjct: 4 ALTRVEIKITGIVQGVGFRPFVYRLAHDLALSGSVLNNSEGVTIEAQASEYTIEQF-KLL 62 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPG 120 PPLARIDS E + + +F I S + D TC C A+++ P Sbjct: 63 LTSPPPLARIDSFETKQIPVEKAQEQFCIIHSQNNADAIVAVSADKCTCADCFADISNPK 122 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 R +RYPF NCT+CGPR+TII +PYDR T MA F +C C+KEY+DPL+RR+HAQPV+ Sbjct: 123 SRYFRYPFTNCTNCGPRYTIINNLPYDRVNTSMATFVMCTTCEKEYQDPLNRRYHAQPVS 182 Query: 181 CPECGPHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP CGP L + ++ + + L AI +K GKI+AIKG+GGFHL CDA N ++V Sbjct: 183 CPNCGPQLSFRNLNLSITSSESDPLVQAIEAIKSGKILAIKGLGGFHLVCDATNHDSVKA 242 Query: 239 LRARKHRPAKPLAVMLP---VADGL---PDAARQLLTTPAAPIVLVDKKYVPEL--CDDI 290 LR RK+RPAKPLA+M+ VA L D Q L + PI ++ K+ PEL I Sbjct: 243 LRQRKNRPAKPLAIMVENSQVAKKLVTGNDTEWQTLNSNERPITVMQKRQKPELEISSII 302 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 APD++ +GV LP PL +L++ + PLVMTS NLSG+P ++E ++ L I D L Sbjct: 303 APDIDRLGVFLPYTPLHQMLMERVARPLVMTSANLSGEPIITASEDIVSKLGHIVDHILD 362 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I+ DDSVV+ ++LR +RGY P ++ P + P L LGA KNT C Sbjct: 363 HNRPILNGCDDSVVQVINNRLQILRLARGYAPLSIYSPQHIE--KPTLGLGAQQKNTLCF 420 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 G LS H+GDL + + + L +Y F + +VHD HP Y +SQWA + Sbjct: 421 AFGHNLFLSPHIGDLVSVEAERYFHDTLSTFSRLYHFEAKLLVHDRHPNYFTSQWAADEE 480 Query: 468 LPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 V HH+AH + LAE++ V+A T DG G+GE+ LWGGE L + + E Sbjct: 481 EAFKTEVQHHYAHVLSVLAENK---TTEQVLAFTFDGTGLGEDHTLWGGEVLLADAYKFE 537 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAI 582 + L L GG+ A KQP R L++ L + ++ + + S L + Sbjct: 538 RIAHLTPFKLIGGEQAIKQPVRLLISILLEKYSPEEIAAMKLPAIDNLSRTHLSNLCKVW 597 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH----------GV 632 + SS GR FD VA L + YEG+A LE A S Sbjct: 598 HKTSPNSQTSSIGRLFDVVAVLLNLVDI-IQYEGQAGILLETAANSVIPSDDMNNYHGKA 656 Query: 633 THPVTMPRVDNQLDLA------------TFWQQWLNW-------QAPVNQRAWAFHDALA 673 + ++ Q D +Q L VN A AF D +A Sbjct: 657 KEDLKANNIEIQCDFKLHLTERNQWQPIELIEQILTEIHKMPLTTDRVNFIARAFMDCIA 716 Query: 674 QGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLS 731 + T +V +GGV NR L R L ++ P+ +P D G++ Sbjct: 717 NMVCDIAL----GFKSTPIVLTGGVFQNRYLLERCERQLTAQANKIMQPKFVPINDAGIA 772 Query: 732 LGQGVIAAARWLAGEVQN 749 LGQ A + + N Sbjct: 773 LGQAWFAINNNIETTIDN 790 >UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU85_PSYIN Length = 762 Score = 905 bits (2339), Expect = 0.0, Method: Composition-based stats. Identities = 270/761 (35%), Positives = 392/761 (51%), Gaps = 40/761 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLY 62 Q+ ++G+VQGVGFRPFV A LNL G V N V + ++ +P + FL QL Sbjct: 2 QQRYQISVQGRVQGVGFRPFVAVTAANLNLTGWVRNIRQSVLIEIQGEPFETQKFLQQLQ 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGE 121 P LA+I+ + + + T F I +S+G I PD C C E+ Sbjct: 62 SKAPALAKIEQLNHQQI-DNNDQTGFHILESSGKNEGVVSISPDIGICEHCQKELFYEEN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFI+CT CGPR++I++ +P+DR T + AFP+C C EY++ DRRFHAQ + C Sbjct: 121 RRYRYPFISCTQCGPRYSILQKLPFDRCHTTLNAFPMCEDCLAEYKNLKDRRFHAQGINC 180 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 +CGP + +++H AE+EAAL AI L+ GKI+A+KG+ GFH+ DA N AV L Sbjct: 181 AKCGPQVSFINHKGERIAEKEAALTLAINALQAGKILAVKGLTGFHIMVDACNHQAVLRL 240 Query: 240 RARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLV-DKKYVPELCDDIAP 292 RARK RP KP A+M P + + + LL + APIVL+ +K L IAP Sbjct: 241 RARKQRPEKPFALMYPQLSMVKSDCLLGEQEKLLLCSAIAPIVLLENKHSNLSLSPAIAP 300 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +GVML PL L+ + + PLV+TS N SG+P NEQAL L + DGF++H+ Sbjct: 301 NNPYLGVMLAYTPLHQLICRAINKPLVVTSANRSGEPVCCDNEQALEQLSQLVDGFVMHD 360 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I Q +DDS+V+ +LRR+RGYVPD L L + P ++ LG LKN+ + + Sbjct: 361 REIYQGLDDSIVKFVNHEPMLLRRARGYVPDYLTLDTEY---PSIVALGGQLKNSIAISK 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 G++ LSQ++G L + + + ++M + T V D HP YV++Q A++ +LP Sbjct: 418 GKRLYLSQYIGSLDNIASVNRHQRTQKIMSRLMGVTADCVACDLHPDYVTTQLAKKQHLP 477 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 + HH AH A + EHQ A+ DG G GE+G LWGGE + V + + + Sbjct: 478 IISTQHHLAHLYAAMLEHQI---IDQAFAVVWDGNGYGEDGTLWGGEFIAVTADKPQRVA 534 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW----QNYSETASVQQQNWSVLARAIERG 585 LPGG A K+P R +A + + + + L + I Sbjct: 535 TFLPFKLPGGAAAIKEPRRVAVALLYEVYGKKIASNEVLKSLSPFELSTIKQLLKMISNN 594 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV---THPVTMPRVD 642 IN+PL SS GR FD +++ L + S+EGEAA LE A + PV Sbjct: 595 INSPLTSSAGRLFDGISSLLNLGQIS-SFEGEAAMRLEFAAKTSKDKGSYPVPVDFAVTP 653 Query: 643 NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 N +D + A FH++ A + + G+T ++ +GG Sbjct: 654 NIIDWRPMLAAIITDIGNHVSSAIIARRFHNSAAIIILKIAQH----YGVTQILLTGGCF 709 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 N LL L +L+ + LPA D L +GQ + A Sbjct: 710 QNSLLIEITFALLQEQGIAVLWHKKLPANDASLCVGQIMGA 750 >UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfitobacterium hafniense RepID=B8FQW6_DESHD Length = 758 Score = 904 bits (2338), Expect = 0.0, Method: Composition-based stats. Identities = 293/769 (38%), Positives = 409/769 (53%), Gaps = 47/769 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQH 64 + + + G VQGVGFRP+V++LA ++ + G V N GV + F +L Q Sbjct: 2 TTAYFIHLNGIVQGVGFRPYVYRLAHEMGIKGWVNNSSHGVYIHAEGLQVPVFYRRLLQE 61 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLA+I E + +F I QS G + I PD ATC CLAE+ + R Sbjct: 62 VPPLAKITHEEYREVAFGN-YADFAILQSREEGQADVLISPDIATCGDCLAELRDVQDLR 120 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT+CGPR+TII+ +PYDR T M +FP+CP C +EY DPL+RRFHAQPVAC + Sbjct: 121 YRYPFINCTNCGPRYTIIQDVPYDRAQTTMQSFPMCPVCAQEYADPLNRRFHAQPVACSQ 180 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP ++ + +A+ + I Q+ G+I+AIKG+GGFHL CD N AV LR RK Sbjct: 181 CGPAVQLL----NAQGDFCAGLGIEQIARGEIIAIKGLGGFHLVCDGGNPTAVQRLRQRK 236 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLN 295 R AKP A+M + + +LL + AAPIV++++K L D++AP L+ Sbjct: 237 ERGAKPFALMARNLEVIRRYLKVSLKEEELLKSSAAPIVILERKKESGNVLPDELAPGLH 296 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVMLP PL LL LVMTSGNLSG+P +NE+A+ +L+GIAD FL+HNRDI Sbjct: 297 TLGVMLPYTPLHALLFDGAFDFLVMTSGNLSGRPLIYTNEEAVRELKGIADYFLLHNRDI 356 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 DDSVV+ G+ + RR+RGYVP P K +L +G +LKN FCL ++ Sbjct: 357 FHPCDDSVVQVIGDEAVLHRRARGYVPLPQKCPQDLKA--SILGVGGELKNAFCLGAKDR 414 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP-TQ 471 A SQ++GD+ ++R+ L Q + P+ V +DAHP + ++Q+A P Sbjct: 415 AFTSQYIGDMEGYENFQRFRQELASFQKVVQIVPEVVAYDAHPDFQTTQFALAGPWPQKI 474 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH + L EH + + DG G GE+ +WG E L+ N L L Sbjct: 475 KVQHHHAHLVSVLGEHGIT---APALGVVCDGTGWGEDRRIWGFEFLKGNAEGYRRLAHL 531 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAIERGINA 588 + LPGGD AK P R A + E + + +L + +E+ + Sbjct: 532 EYLPLPGGDAGAKHPLRIAYAYGKSLLSEREWLMTERLWERLAGAEQKILDQQLEKRLQI 591 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA------ASCHGVTHPVTMPRVD 642 SS GR FDAV+A LG +++YEG+AA LE+ A S + + + Sbjct: 592 FETSSGGRLFDAVSALLGIC-TSVTYEGQAAIELESKAALWSGKNSEDALEPRYLIEWAE 650 Query: 643 NQLDLA--------TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 N L Q L+ + P A+ FHD+LA G + E G LV Sbjct: 651 NGECLILKVKELYWGIIQDVLDGKEPA-FIAYHFHDSLAHGIVRTVLEL--QVGEGPLVL 707 Query: 695 SGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAAR 741 +GGV N+LL ++ F ++ + LP GDGGL+LGQ +I R Sbjct: 708 TGGVFQNKLLTEKVLVLCKAFGIQVIRAKELPPGDGGLALGQILIGNER 756 >UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H2J5_STRCL Length = 771 Score = 904 bits (2337), Expect = 0.0, Method: Composition-based stats. Identities = 286/774 (36%), Positives = 403/774 (52%), Gaps = 41/774 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + + + G VQGVGFRP V++LA Q L G V ND GV + + E F Sbjct: 3 MTSDAVRRT-VEVTGFVQGVGFRPHVYRLATQHLLGGWVRNDARGVTICVEGPREAADLF 61 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQL-PTEFTIRQSTGGTMN-TQIVPDAATCPACLAE 115 L + P LAR+D+ + + FT+R ST + + PD+ C C E Sbjct: 62 GEALLKRLPGLARVDTCAVVAEEPVRDWTSSFTVRHSTAESGAGALVTPDSHVCADCARE 121 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + P +RR+RYP +NCT CGPR++IIR +PYDRP T MA F +CP C EY P DRRFH Sbjct: 122 LFDPADRRHRYPLLNCTDCGPRYSIIRGLPYDRPKTTMADFAMCPECRAEYESPADRRFH 181 Query: 176 AQPVACPECGPHLE-WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 AQP AC CGP + + G A + A L+ G I+A+K +GG+ L D R+ Sbjct: 182 AQPTACWSCGPQVRLLLPDGSDAGTADPVATAAGLLRDGHILAVKALGGYQLMADPRSPA 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCD 288 A A LRARK R +KP A+++ + L D R+LL +P PIVL+ + L Sbjct: 242 ATAELRARKERSSKPFALLVRDSATAAEYTVLDDRERRLLESPGRPIVLLRARPDSSLAP 301 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +AP +G+MLPA PLQHLLL L+ TS N +P A + E+AL L+G+AD F Sbjct: 302 GVAPGSATLGLMLPATPLQHLLLAAAGPVLIATSANAPDEPMARTEEEALRGLRGLADAF 361 Query: 349 LIHNRDIVQRMDDSVVRE-------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 L+H+R+I R+DDS+ R +RR+RGYV P VPPVL LGA+L Sbjct: 362 LVHDREIHMRVDDSIARVVHSTVEPKVTFVRRARGYV---PDPVPAPFPVPPVLALGAEL 418 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNT CL G+ +SQH+GDL G Q + + + +++++ TP+YV HD HP + S++ Sbjct: 419 KNTVCLGSGDNLYVSQHIGDLKSLGNQRFFADTIAHLRSVFGVTPRYVAHDLHPDFHSTR 478 Query: 462 WARE-MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 +A ++ V HHHAH A+C+A++ VI + DG G G +G +WGGE L Sbjct: 479 YAASCQDVRLVGVQHHHAHMASCMADNGLDR---PVIGVVFDGTGYGTDGTIWGGEFLIG 535 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ---NWSV 577 +YR E L LPGGD A ++P R + + ++++ V Sbjct: 536 DYRGFERKAHLARFRLPGGDKAVREPDRVAIGLLAQHFGADAATLPLDLLRRRDPFEVGV 595 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH--GVTHP 635 L + RG+NAP SS GR FDA +A LG + YEG+AA LE L A H P Sbjct: 596 LMKMATRGVNAPETSSMGRLFDACSALLGVC-GRVGYEGQAAIELEQLIAWDHTPVEPWP 654 Query: 636 VTMPRVDNQLD------LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 V + D++L L + + FH+++ + + + G+ Sbjct: 655 VRLREEDDRLVIDHGPWLEGMVSDLSGPGGSAARVSRTFHESVVRAVVEVCLRLSHSSGV 714 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 T V SGGV N+ L R+ L A + +P DGGLS+GQ ++AAAR Sbjct: 715 TDTVLSGGVFLNQHLLVRVEEELTRAGLGVYTHSRIPTNDGGLSVGQAMVAAAR 768 >UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL9_9BACT Length = 774 Score = 901 bits (2330), Expect = 0.0, Method: Composition-based stats. Identities = 287/766 (37%), Positives = 406/766 (53%), Gaps = 43/766 (5%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLV 59 + +Q+ I G VQGVGFRP V++LA+ LNL G V N+ GV + + D E FL Sbjct: 9 QAKHKRLQVFIHGAVQGVGFRPHVYRLARDLNLVGWVINNSQGVRIEVEGLAFDLEQFLD 68 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNT 118 +L PPLA++ S+E ++F +R S G I+PD ATCP C AE+ Sbjct: 69 RLKSEKPPLAQVTSIESRYVKPV-GFSDFRVRHSDSNGEKTALILPDIATCPECQAELFD 127 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P +RRYRYPFINCT+CGPRF+I+ +PYDRP T M FPLCP C KEY P RRFHAQP Sbjct: 128 PKDRRYRYPFINCTNCGPRFSIVETLPYDRPNTTMKRFPLCPLCQKEYDAPEHRRFHAQP 187 Query: 179 VACPECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +AC CGP LE+ + G A + AL+ A + G ++A+KG+GGF L DARN++A+ Sbjct: 188 IACSTCGPTLEFWNKATGPCAHGDEALKMAEHLVSSGHVLALKGVGGFQLIVDARNADAI 247 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 A LR K R KPLA+M P L R+LL +PA+PIVL+ K+ D + Sbjct: 248 ARLRKCKGRGPKPLAIMCPDLGYTRSICHLSALERKLLLSPASPIVLLKKR--SRAFDAV 305 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP + + GVMLP +PL HLL+++L P+V TSGN S +P I NE+A+ L IAD FL+ Sbjct: 306 APGMRDYGVMLPCSPLHHLLMRDLGYPIVATSGNRSEEPICIENEEAIERLSDIADAFLM 365 Query: 351 HNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I + +DDS+ R ++LRR+RGY P + + +P + LGA LKN+ + Sbjct: 366 HDRPIARHVDDSIARVILGDVQILRRARGYAPLPINVDL---EIPSCIALGAHLKNSVAI 422 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 V + +SQH+G+L + R + +YD P +V HD HP YVS+ +AR Sbjct: 423 VAQNKIFISQHIGNLETAESYRAFETTARDLPILYDCQPTFVAHDKHPDYVSTFYARGTP 482 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 L +V HH AH +C+A++Q V+ ++ DG G G++ ++WGGE + Sbjct: 483 LERISVQHHLAHVYSCMADNQLQ---APVLGISWDGTGYGDDKSVWGGESFLIEDSAERR 539 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP----EWQNYSETASVQQQNWSVLARAIE 583 + + L GGD+AA QP R LA P ++ + + +L + Sbjct: 540 VSSITQFPLLGGDIAALQPRRVALALLQASFPKSLGDYAKLPALRAFTASEYRILEQITL 599 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD- 642 + N PL SS GR FD V++ LG +EG+AA LE LAA+ P D Sbjct: 600 KHRN-PLTSSIGRLFDGVSSILGICQTNR-FEGQAAALLEFLAATAPKNQLPYPYILHDQ 657 Query: 643 ---NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 D + + A FH LA A + A+ G+ ++ +G Sbjct: 658 GGFTTFDWKPMIRAIVEEYTNGVNPPIIAARFHQTLA----AYAVDIASRHGVPSIALTG 713 Query: 697 GVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 G + NRLL +A L F + +P DGG+ +GQ Sbjct: 714 GCMQNRLLCELIAETLKENGFNPFIHRRVPPNDGGICVGQAYAVGR 759 >UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZMU3_9FIRM Length = 802 Score = 901 bits (2329), Expect = 0.0, Method: Composition-based stats. Identities = 281/804 (34%), Positives = 390/804 (48%), Gaps = 75/804 (9%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQ 60 + Q+R+ G VQGVGFRP V + A +HG+VCN G VE+ + E F+ Sbjct: 2 SEEITRQIRVYGIVQGVGFRPTVSRHAAARGIHGNVCNKGPYVEIYAQGPEEAVSGFISD 61 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 + P A I + E S+ T+F I +S + PD A C C EM P Sbjct: 62 IENRPPKRAAILKINVENIENSERYTQFDIIESEKTKGEIFVSPDIAICEECKEEMFDPK 121 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRY +PFINCT CGPR TI+ ++PYDR T M FP+CP C KEY P RR+ AQPV Sbjct: 122 NRRYLHPFINCTCCGPRLTILDSLPYDRERTSMKEFPMCPDCAKEYNAPATRRYDAQPVC 181 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C ECGP + + G A+ A + G IVAIKGIGGFHL CDA N AV LR Sbjct: 182 CNECGPEVYLI--GREERGREAITYARKTIAGGGIVAIKGIGGFHLCCDASNETAVRKLR 239 Query: 241 ARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPE-LCDDIAPD 293 K RP KP AVM + + ++L PI+L+DKK + LC +AP Sbjct: 240 QLKRRPMKPFAVMAKNLEAVRKECEVSAEQTRILDGHQKPILLLDKKKEAKILCPSVAPG 299 Query: 294 LNEVGVMLPANPLQHLLLQ-----ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +VGVMLP P+Q L+ E+ LVMTSGN SG P +++A A+L G D Sbjct: 300 NPKVGVMLPYAPVQLLIFTYDDGIEMPEFLVMTSGNTSGAPICRDDQEAEAELSGFCDCM 359 Query: 349 LIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L H+R I R DDSV+ + M+RRSRGY P + ++ VL +G +LKN+F Sbjct: 360 LSHDRKIRIRADDSVMDFYEDRPYMIRRSRGYAPLPFMVSTPYRGQ--VLAIGGELKNSF 417 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE 465 C+ + S ++GDL D RE + M+ + + P+ V D HP Y S A E Sbjct: 418 CIGVDNRFYPSPYVGDLEDLRTVKALRETVGRMETLLEVEPEIVCCDMHPKYNSVMVAEE 477 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + LP V HH+AH +C+AE+ VI ++ DG G G +G +WGGE L + Sbjct: 478 LGLPVVKVQHHYAHILSCMAENDC---AEQVIGVSFDGTGYGTDGTIWGGEILLSDLDGF 534 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE----TASVQQQNWSVLARA 581 +G + GGD ++K+ WR ++ + + +E +Q +V Sbjct: 535 TRVGSVMPFLQVGGDASSKEGWRIAVSLIYGMTGDRKKAAEITEKLELCTKQEANVQFTM 594 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--------------- 626 +R INA +++S GR FD V+A LG + ++EGEA+ ALE A Sbjct: 595 ADRKINAVISTSAGRLFDGVSAMLGIRRKS-TFEGEASMALEFAAEEYRETMLEKSKQQI 653 Query: 627 ----------------ASCHGVTHPVTMPRVDNQ---------LDLATFWQQWLNWQ--- 658 + ++ + R+D++ L+ + ++ LN Q Sbjct: 654 QETEKYGYDKEDTDTLSRNENLSETEEIKRMDDKLISAGDRLLLNTESLIKEILNRQLNG 713 Query: 659 APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFT 716 + A+ FH LA A + + G SGGV NRLL H L F Sbjct: 714 EDPGKLAYFFHRELACQITAACVKIRELSGCNKAALSGGVFQNRLLLELTDHMLLEQGFE 773 Query: 717 LLFPQSLPAGDGGLSLGQGVIAAA 740 +L Q LP DGG++LGQ V A A Sbjct: 774 VLKHQLLPPNDGGIALGQAVYAMA 797 >UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Nautilia profundicola AmH RepID=B9L8N7_NAUPA Length = 759 Score = 901 bits (2329), Expect = 0.0, Method: Composition-based stats. Identities = 250/780 (32%), Positives = 376/780 (48%), Gaps = 75/780 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET-FLVQLYQHCP 66 ++ +I G VQGVGFRP V+++A++L+L G V N DGV + + + + F+ L + P Sbjct: 2 RIKYKINGIVQGVGFRPTVYKIAKELDLKGYVLNSSDGVIIEIEGENQNKFIETLKNNLP 61 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLARID++E+E T+F I +S T T I PD A C CL EM RRY + Sbjct: 62 PLARIDTIEKEILERKN-YTDFEIIESKQTTKTTSISPDIAICDECLKEMFDKNNRRYLF 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TII+ +PYDR T MA F +C C +EY +PLDRR+HA+P C ECGP Sbjct: 121 PFINCTNCGPRYTIIKDIPYDRKNTSMAKFKMCEKCYEEYTNPLDRRYHAEPTCCFECGP 180 Query: 187 HLEWVSHGEHAEQEAA-----------LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 L E+ + ++ ++K GKIVAIKG+GGFHL C+A N A Sbjct: 181 ELNVKWKMENGTWKELRIENGEWRIKKIELIAEKIKEGKIVAIKGLGGFHLVCNATNEEA 240 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDD 289 V LR RK RP KP A+M D + + +L+T+ PIVLV K+ Sbjct: 241 VKELRRRKQRPTKPFAMMFKDLDTIKEYCDLSAKDTELITSKEKPIVLVKKRVD---LPQ 297 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IA ++ GV LP P+ +LL + + P+V TS N+S +P + + + L + D L Sbjct: 298 IADGIDRYGVFLPYTPVHYLLFEYIDFPIVATSANISDEPIIRDSNELVEKLGNVVDYIL 357 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVP-------------- 392 ++RDI+ DDSVV+ +R +RGY P + N Sbjct: 358 DNDRDIINACDDSVVQAVEFEYITMRCARGYAPLMKNVKFKMDNGKWTMENEKDKIDRNN 417 Query: 393 -----------PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 +L +GA+ KNT L ++ +LS H+GDL G + + + + Sbjct: 418 NSQFSILNSQLNILGVGANQKNTISLSFKDKFILSPHIGDLGTIGSIEYFERTIDTFRRL 477 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 YDF ++ D HP Y S++WA + N + HH+AHA A + E+ GD +A Sbjct: 478 YDFEEDVIICDKHPYYESTKWALKQNKKIYQIQHHYAHALATMFEYDLE---GDYLAFIF 534 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG G G++G +WGGE N E + L GG+ A K P +A Sbjct: 535 DGTGYGDDGTIWGGEVFIANRHTYERVHYFKQFKLIGGEKAVKNPANMAVALL------D 588 Query: 562 QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 +E ++ LA+ + +G + PL SS GR FD VA G +EG + Sbjct: 589 DEIAEKFKNRK-----LAKNLSKG-SFPLTSSMGRIFDMVAYLAGMIERN-EWEGMSGLL 641 Query: 622 LEALAASCHGVTHPVTMPR---VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAA 678 +E + R V ++D + + F +++A Sbjct: 642 IEKYYNPEIAEYISLADSRGCGVKKEIDFVELLNFAAKNRGDFELVSSVFINSIANCVVE 701 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 + + M + ++ GGV N+ L + + ++ + F +++P DGG+S+GQ Sbjct: 702 I----SEMYDLD-VILGGGVFQNKTLLSEILKR-SNKKIYFNKTIPINDGGISVGQTAWG 755 >UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V377_9PROT Length = 772 Score = 899 bits (2324), Expect = 0.0, Method: Composition-based stats. Identities = 315/778 (40%), Positives = 408/778 (52%), Gaps = 51/778 (6%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFL 58 A T C ++R+ G+VQGVGFRPFV++LA +L L G V ND GVE+ + + E + Sbjct: 7 AGMTVCA-KIRVSGQVQGVGFRPFVYRLAHELALAGWVRNDSCGVEICVEGERERILNLI 65 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 +L P LARI+ V E F+I S GG M T I PD A CP CLAE+ Sbjct: 66 ARLQSEPPKLARIEQVSYELTPQVFDVQGFSILASRGGVMQTSIAPDMAICPDCLAELFN 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P +RRYR+ FINC HCGPR+T+ R MPYDR T M F CPAC +EY DP RRFHAQP Sbjct: 126 PADRRYRHAFINCIHCGPRYTLTRRMPYDRANTSMDKFVQCPACQREYDDPETRRFHAQP 185 Query: 179 VACPECGPHLEWVSHG-EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 ACP CGP L+ + E L + L+ G+IVA+KG+GGFHL C A N AV Sbjct: 186 NACPACGPTLQLYDADFQPVETADPLVQTASLLRAGQIVALKGVGGFHLVCMADNQAAVN 245 Query: 238 TLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYV-PELCDDI 290 LRA K R KP AVM+ + LL T PIVL+ K E + Sbjct: 246 RLRALKQRDEKPFAVMVLNTRSAQHYGVVSADEAFLLETGERPIVLLGKHPACDEDLPCV 305 Query: 291 APDLNEVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAISNEQ 336 APDL+ +G++LP PL +LL EL + LVMTS N G+P I++++ Sbjct: 306 APDLSHIGLLLPYTPLHYLLFHELLGHPDGINWLQQATKIALVMTSANAGGEPLVINDDE 365 Query: 337 ALADLQGIADGFLIHNRDIVQRMDDSVVRESG-----EMLRRSRGYVPDALALPPGFKNV 391 A A +ADG+L H+RDI+ R DDSV+R + +RR+RGY P + LP Sbjct: 366 ARA--SRLADGYLTHDRDILHRCDDSVMRVVPQAPKFQFIRRARGYTPRRILLPF---AA 420 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P VL LG LKNT C+ RG +A +SQH+GDL G + E + + +I+D PQ V H Sbjct: 421 PSVLALGGGLKNTVCVTRGNEAFVSQHIGDLDHAGARAMLDETVTHLCDIFDVEPQCVAH 480 Query: 452 DAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP +SQ+A +P V HHHAH A AE+ V+ L LDG G G Sbjct: 481 DLHPDCYTSQYAARFAAARGVPMIAVQHHHAHINAICAEYAVT---QPVLGLALDGAGWG 537 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G WGGE LRV+ + E LG L AVALPGGD AA +PWR A + Sbjct: 538 TDGTSWGGELLRVSGAQFERLGHLAAVALPGGDRAACEPWRMASAALFEMGKGAEILQ-- 595 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 Q +A + RG++ P +SS GR FD A LG + YEG+AA LEALA Sbjct: 596 RFSNQPAAPTVAAMLARGLHCPQSSSMGRLFDIAAGLLGVSQI-QHYEGQAAMHLEALAV 654 Query: 628 SCHGVTHPVTMPRV--DNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQAT 685 V R+ + LD + +Q + P + A FH ++ G A + + A Sbjct: 655 RQGEVKPLDGGYRLAENGVLDFQSLLRQLASCNDP-SFGAALFHATISGGLIAWVSDAAQ 713 Query: 686 MRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GI + GG + N LL L L +L Q LP DGG+SLGQ +A + Sbjct: 714 KTGIGCVALGGGCLLNSLLSEALTSGLSKQGLQVLSAQLLPPNDGGISLGQAWVAINQ 771 >UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQG6_LAWIP Length = 796 Score = 898 bits (2321), Expect = 0.0, Method: Composition-based stats. Identities = 285/782 (36%), Positives = 414/782 (52%), Gaps = 59/782 (7%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPL 68 I+G+VQGVGFRPFV+ A +L L G V N GV + ++ D F + P + Sbjct: 18 TIKGRVQGVGFRPFVYCTATKLGLTGKVKNTIYGVWIEVQGDDSKLNIFKEMITNEKPSI 77 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERRYRYP 127 A+ S+ + + TEF I +S+ G + I PD ATC C+ E+NT + RY+YP Sbjct: 78 AQFTSITMQSLGFQDKETEFLIEESSDGIQYTSLISPDIATCEYCVKELNTTTDHRYQYP 137 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FI+CT CGPR+TII PYDR T M++FP C C+KEY + LDRRFHAQ ACP CGP Sbjct: 138 FISCTLCGPRYTIIHKAPYDRHHTSMSSFPFCFTCEKEYNNSLDRRFHAQSNACPTCGPQ 197 Query: 188 LEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 L H A+ AI + GKI+A+KGIGGFHL CDA N++ V TLR RK+R Sbjct: 198 LWLTDHDNRYITYNSEAILLAIEYIYKGKIIAMKGIGGFHLICDATNADVVNTLRYRKNR 257 Query: 246 PAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P KPLAVM+P + + + Q + +P PIV++ K L +IAPD++ +G+ Sbjct: 258 PDKPLAVMVPNINIARQIAYISEVEIQKMQSPECPIVIL-KAIPHSLPKNIAPDVSTIGL 316 Query: 300 MLPANPLQHLL---------LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 MLP PL H+L L+ + LVMTS N+SG +N+ AL L I D FL Sbjct: 317 MLPYTPLHHILCNTLTKVAELERIIPALVMTSANVSGGTIIYNNDDALIRLNTITDFFLF 376 Query: 351 HNRDIVQRMDDSVV----RESGE-----MLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 HNR+I+ +DDSVV G+ +RR+RGY P + + N P ++ LGA+ Sbjct: 377 HNRNIIVPVDDSVVCLREDNIGQSPNWHFIRRARGYAPLPITVKTLKDNTPCIIALGAEH 436 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K+TFC RG+ LSQH+GDLS+ + + + ++ + ++ F+P+ VV D HP Y +++ Sbjct: 437 KSTFCFTRGQDIFLSQHIGDLSEPETEWSFCQTVKHISQLFGFSPEVVVCDLHPDYFTTR 496 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV- 520 +A E LP + HH AH + LAEH + LTLDG G G +G +WGGE + Sbjct: 497 YAAEFGLPILQLQHHIAHGYSVLAEHGHK---EPALVLTLDGTGYGMDGTIWGGELFYLY 553 Query: 521 -------NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC-----LRFVPEWQNYSETA 568 +Y + E L L + LPGG+ A +PWR L + Sbjct: 554 PEAVKGKSYEQGERLARLSLLPLPGGEKAIHEPWRLLSGFLALLKIHELEGVDSLVRQLW 613 Query: 569 SVQQQNWSV---LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 + W++ + + + L SSCGR FD V+ G ++YEG+AA LE Sbjct: 614 KNSPERWTIHSAIREMVSKD-KVKLTSSCGRLFDTVSTLFGLCDY-ITYEGQAAIRLEHQ 671 Query: 626 AASCHGVTHPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALM 680 + +++ D+ +LD F ++ + + V+ A FH L +G A L Sbjct: 672 QDMSCNESLTISIVEKDSIYELDTTVFLKELIELLQQKISVSILARRFHIGLVEGLADLA 731 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 + G+ T+ SGGV++N+ + + L L T L +++P+GDGG+S GQ A Sbjct: 732 LIGSENTGVKTVGLSGGVLNNQTISSLLPKALRYRGLTPLMHKNVPSGDGGISFGQAYWA 791 Query: 739 AA 740 + Sbjct: 792 SM 793 >UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGK3_RHOVA Length = 823 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 354/813 (43%), Positives = 449/813 (55%), Gaps = 78/813 (9%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQ 63 GV +R+RG VQGVGFRP VW++A++L L GDV ND +GV +R R + F+ L Sbjct: 8 KGVSIRVRGLVQGVGFRPHVWRIARELWLTGDVLNDAEGVLIRAFGPRAALDAFIAALAD 67 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLAR++ +E P P F I +S G + T IVPDAATCPACLA++ P RR Sbjct: 68 RAPPLARVECIETAPL-NGPAPDMFRIVESGAGDVTTGIVPDAATCPACLADIRDPENRR 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCTHCGPR +I+RA+PYDR T MAAF +CPAC EY DP DRRFHAQP ACP Sbjct: 127 YRYPFTNCTHCGPRLSIVRAIPYDRATTSMAAFEMCPACRAEYEDPADRRFHAQPNACPV 186 Query: 184 CGPHLEWVSHGEHAEQ----EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGP L A ++AA A ++ G IVAIKGIGGFHLACDA N +AV L Sbjct: 187 CGPRLWLEGADGAALPLRGARDEIEAAAALIRDGAIVAIKGIGGFHLACDAANEDAVTRL 246 Query: 240 RARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKK-YVPELCDDIAP 292 RA K R KPLA+M + R L + AAPIVL+ ++ P L IAP Sbjct: 247 RAGKRRSGKPLALMARNVAMVTRYAHIAPPERAALESAAAPIVLLSRRADAPPLASSIAP 306 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 +G MLP PL HLL++ L P+V+TSGN+S +P +I+N+ A L IAD FL+H+ Sbjct: 307 GQTTLGFMLPYTPLHHLLMEALPGPIVLTSGNVSDEPQSIANDDARERLSEIADAFLMHD 366 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDIV R+DDSVVR + +RR+RG A P F+ P VL +GA+LK+TFCL Sbjct: 367 RDIVNRLDDSVVRLAAGRVRTVRRARGLA-PAPLPLPLFQGAPAVLAMGAELKSTFCLAS 425 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G +A++SQH+GDL D R L L + ++ F P V DAHP Y +++ A E Sbjct: 426 GGRAIVSQHIGDLEDAATHADCRANLALYKRLFRFAPDVVAVDAHPDYHATRLGEALAAE 485 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN--------------GA 511 LP VLHHHAH AA +AEH PLD V+ + DG+GMG++ G Sbjct: 486 RGLPIARVLHHHAHVAAVMAEHGEPLDATPVLGIAFDGLGMGDDVPDQPALEAPHLSTGK 545 Query: 512 ------------------LWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQ 553 LWGGE L +YR C + V L GG A ++PWRNLLA Sbjct: 546 LIDNKGERSDAFQRTHRPLWGGEFLVADYRACRRVASFAPVPLIGGAKAMREPWRNLLAH 605 Query: 554 CLRFVP------EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGC 607 + + + S + + + + + RG+NAP ASS GR FDAVAAALG Sbjct: 606 LDVALGWDEASARFGDLSILRRLAAKPVAPALQMMARGVNAPPASSAGRLFDAVAAALGI 665 Query: 608 APATLSYEGEAACALEALAASCHGVT---HPVTMPRVDN----------QLDLATFWQQW 654 +YEG+AA LEALAAS P+ ++ + +L WQ Sbjct: 666 CFDEATYEGQAAVELEALAASVRCRDFGRWPIAARKLPSRGMGEDGGPIRLGWGELWQAV 725 Query: 655 LNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 L+ AP A FH LA A R A G+ +V GGV HNRLL + Sbjct: 726 LDDLARDAPPAIVAARFHAFLADTVADTARALARRDGLRRIVLCGGVFHNRLLLEGVLER 785 Query: 712 LAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 LA F +L P PAGDG +SLGQ VIAAAR + Sbjct: 786 LAGDFEVLAPALCPAGDGAISLGQAVIAAARAI 818 >UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U668_HYDS0 Length = 736 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 241/748 (32%), Positives = 368/748 (49%), Gaps = 33/748 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQH 64 +L I+G VQGVGFRPFV+ LA L G V N+ DGV + + D + F+ L Sbjct: 5 KKRFRLLIKGTVQGVGFRPFVYNLATSLGAKGFVLNNADGVTIEIENVDIDKFIYLLKAK 64 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 PPL+ I+ + + W +F I +S G + PD C CL E N +RR Sbjct: 65 KPPLSEIEDITIKTLDWFGFE-DFKIEESEAFGDKTPSVPPDMGICEDCLKEFNDLNDRR 123 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y+YPFINCT+CGPR++I+ +PYDR T M F +C C KEY D +RRFHA+ ++CP Sbjct: 124 YKYPFINCTNCGPRYSIVLDIPYDRKNTTMNVFEMCEDCKKEYEDKTNRRFHAEAISCPN 183 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + W + +E + LK KI+A+KG+GGFHL C+A + AV TLR RK Sbjct: 184 CGP-IYWYEKDGNIYKENIFELMAKDLKDSKIIALKGLGGFHLICNALDEKAVRTLRERK 242 Query: 244 HRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R +KP +M + + + + LT+ PIVL+ +K ++ L+ V Sbjct: 243 KRSSKPFGIMFKSLEEVLKYLEPKEDEIKALTSVQKPIVLIKRK--SPYFEEACKGLSSV 300 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G L + L + P++ TSGN+S P N++A + L+ IADGF +HNRDI + Sbjct: 301 GAFLAYTGIHLRLFDFIDFPIIATSGNISDTPICKDNDKAKSKLKDIADGFFMHNRDIKR 360 Query: 358 RMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 +DDSV + ++R +R Y P + K + L +GA LK+T + + V Sbjct: 361 PIDDSVIKLIDNDVSIIRLARSYTPKPIYTNTHAKAIS--LGMGAFLKSTISIFKNNTIV 418 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 LS H+GDL ++ L YD P VV D HP + SS +A+ M T+ Sbjct: 419 LSPHIGDLESIDTIEHYKNTLEDFLRFYDVKPDIVVCDMHPNFFSSIYAKSMFSNIITLQ 478 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH AH + +AE+ +D ++ + DG G GE+G +WGGE + + + Sbjct: 479 HHKAHILSVIAENNISIDQE-ILGIAWDGTGYGEDGTIWGGEFFVGDAYNLKRAFYIKPY 537 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAIERGINAPLA 591 L G + A K P R +L+ + E E +++ L + E IN Sbjct: 538 KLIGNEKAIKDPRRIVLSFLFELLKEKAYKHPLIEKLHFEEKELKTLYKMWENDINTTKT 597 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW 651 SS GR FD VA +G + YE + A +E +N++ ++ + Sbjct: 598 SSIGRLFDMVAYLMGLTD-VIDYEAKGAMMVE---DRYIDSKEYYDFHISNNEIIIS--F 651 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + L + +++ A F + L + ++++ + +V SGGV +NR L +L Sbjct: 652 EDIL-GEKEIDKMASKFINTLFEIIVSIIK----LLKAKNVVVSGGVFYNRPLMRKL-KA 705 Query: 712 LADFTLLFPQSLPAGDGGLSLGQGVIAA 739 L L + + +P GDGG+S+GQ Sbjct: 706 LDGINLFYNKKIPTGDGGISVGQAFYGG 733 >UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Euryarchaeota RepID=B6YT84_THEON Length = 813 Score = 896 bits (2316), Expect = 0.0, Method: Composition-based stats. Identities = 266/772 (34%), Positives = 395/772 (51%), Gaps = 45/772 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLRE---DPETFLVQLY 62 +L ++G VQ VGFRPFV+++A + L G V N GD GVE+ + D FL+ L Sbjct: 45 KAYRLHVQGIVQAVGFRPFVYRIAHEHGLRGYVKNLGDAGVEIVVEGPEKDIGAFLLDLR 104 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ--IVPDAATCPACLAEMNTPG 120 + PPLA+I+ +++ F I +S+ G I PD A C CL E+ P Sbjct: 105 EKLPPLAKIEKIKKREIPIQGFDR-FYIEKSSQGGSGGDSIIPPDIAICEDCLRELFDPT 163 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RY YPFI CT+CGPRFTII +PYDR T M FP+C C+ EY+DPL+RR+HA+PV Sbjct: 164 NKRYMYPFIVCTNCGPRFTIIEDLPYDRVNTTMREFPMCDFCESEYKDPLNRRYHAEPVC 223 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CP CGP ++ L+ A + G IVAIKGIGG HLACDA + VA LR Sbjct: 224 CPVCGPSYRLYTNDGEELIGDPLKKAAELIDNGYIVAIKGIGGIHLACDATREDVVAELR 283 Query: 241 ARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 R HRP KP A+M + + + + L + PI+ + KK L +++AP L Sbjct: 284 KRIHRPQKPFAIMAKDVETIEEFAFISPEELEELKSYRRPIMTLRKKEPFPLPENLAPGL 343 Query: 295 NEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + +GVMLP ++L + P VMTS N G P NE+A +L+ +AD FL+HNR Sbjct: 344 HTIGVMLPYAGTHYILFHYSKTPVYVMTSANYPGMPMVKDNERAFEELKDVADYFLLHNR 403 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I+ R DDSVVR ++RRSRG+VP + +P ++ L +GA+L N F + + Sbjct: 404 KILNRADDSVVRFVNGRRAVIRRSRGFVPLPIEIPFDYRG----LAVGAELMNAFGVTKN 459 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFT-PQYVVHDAHPGYVSSQW----ARE 465 + SQ++G+ S + REA+ + I +V D HPGY +++ A E Sbjct: 460 GKIYPSQYIGNTSKVEVLEFMREAVEHFKRILRVRDFDLIVADLHPGYNTTKLAMEMANE 519 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + + V HH+AH A+ +AEH +++ + +DG+G G +G WGGE + ++Y + Sbjct: 520 LGVEFLQVQHHYAHIASIMAEHNL----DEIVGIAVDGVGYGTDGHTWGGEVIYLSYEDV 575 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----------NYSETASVQQQNW 575 E L + LPGGDLA+ P R L+ + + E+ + + Sbjct: 576 ERLAHIDYYPLPGGDLASYYPLRALMGILSKVYGIEELEEVIEKCCPKAIESLRYGKVEF 635 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 +V+ + + +N ASS GR DA + L A YEGE A LE+ A Sbjct: 636 NVVLTQLAKEVNTSYASSTGRVLDAFSVLLNVAYRR-HYEGEPAMKLESFAIRGKN-DLG 693 Query: 636 VTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 ++P + + +QQ L A A++ H AL + FA + E+A G+ + S Sbjct: 694 FSVPVEGELIKVEELFQQALEINASPADVAYSVHLALGRAFAEIAVEKAKEFGVKNVGIS 753 Query: 696 GGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 GGV N L+ + + +P GD G+++GQ + +L G Sbjct: 754 GGVAFNELIVKTVRKIVEANGLRFYSTYEVPRGDNGINVGQAFLGGL-YLEG 804 >UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Acidithiobacillus RepID=B5EP19_ACIF5 Length = 803 Score = 895 bits (2313), Expect = 0.0, Method: Composition-based stats. Identities = 345/774 (44%), Positives = 444/774 (57%), Gaps = 42/774 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 + + G ++R+RG VQGVGFRP VW++A+ L GDVCNDG+GV +R+ + + FL Sbjct: 6 DRVATLGEEVRVRGLVQGVGFRPAVWRIARDCGLSGDVCNDGEGVLIRIWGPATERDRFL 65 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 +L PPLARID V R F I S G ++T VPDAATCPACL E+ Sbjct: 66 TRLRDEHPPLARIDEVVRGSLREDPPEGPFGISTSRSGHVHTGAVPDAATCPACLGEIFD 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P RRYRYPF NCTHCGPRF+I+ +PYDR T M FPLC C EY +P DRRFHAQP Sbjct: 126 PFHRRYRYPFTNCTHCGPRFSILEDIPYDRAHTSMGVFPLCRDCRAEYENPEDRRFHAQP 185 Query: 179 VACPECGPHLEWVSHGEHA------EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 VAC CGP V HA Q A+ AA LK G+IV IKG+GGFHLACDA N Sbjct: 186 VACHACGPKARLVRLDGHAVSADRYTQLDAVDAATNLLKCGEIVLIKGLGGFHLACDATN 245 Query: 233 SNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPEL 286 AV+ LR RKHRP KPLA+M + + A +LL + APIVL+++ L Sbjct: 246 DRAVSGLRLRKHRPHKPLALMARDLEVVRRYAHVSRAEEKLLQSHQAPIVLLNRLDNDSL 305 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 IAP + +G MLP PL HLL++ + P+V+TSGNLS P + A+ L+G+ D Sbjct: 306 APGIAPGMRRLGFMLPYTPLHHLLMRRMDRPIVLTSGNLSDAPQVTDDAAAVRALRGVTD 365 Query: 347 GFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 L H+R I+ R+DDSVV+ +G+ +LRR RGY P++L LP GF P +L LG +LKN Sbjct: 366 WMLTHDRAIINRVDDSVVQMAGDDTMILRRGRGYAPESLPLPAGFGASPDLLALGGELKN 425 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW- 462 TFCL++ QA+LSQH+GDL + L L ++ P+ VV D HP Y+S +W Sbjct: 426 TFCLIKDGQAILSQHMGDLEQAAVWDDTVRNLALYARLFQHVPKAVVVDRHPEYLSRKWG 485 Query: 463 ---AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 A E +LP +V HHHAH AA +AEH PL+ VIAL LDG+G+G+ GA WG ECL+ Sbjct: 486 VEMAEEGDLPLISVQHHHAHIAAVMAEHGLPLEHPPVIALALDGMGLGDGGAWWGCECLQ 545 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNL---LAQCLRFVPEWQNYSETASVQ---QQ 573 V+YRE HLGGL ALPGG LA ++PWRN LA + Q +++ A V+ ++ Sbjct: 546 VSYREVRHLGGLRPSALPGGGLAMREPWRNAFVQLADAFGWSVARQRFADLAIVEYLVEK 605 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA-----LAAS 628 + L +R I PL SS GR FDAV+A G +S+EG+AA LEA + Sbjct: 606 PVAQLLHMRDRNICTPLCSSAGRLFDAVSAVCGLCMDRVSHEGQAAMLLEACVDPSIMGD 665 Query: 629 CHGVTHPVTMPRVDN---QLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMRE 682 +P + + Q+D T WQ L PV A FH A G A L+RE Sbjct: 666 ASEPGYPFGIAESEKGFIQMDPRTLWQPLLGDLQGGVPVATVAARFHKGFAAGLAQLLRE 725 Query: 683 QATMRGIT-TLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLG 733 T T+ SGGV N L L +L P +PA DGGL+ G Sbjct: 726 ALGATPWTSTVALSGGVFQNLTLLRATREALESQGLEVLIPHLIPANDGGLAFG 779 >UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Clostridiales RepID=C9LW94_9FIRM Length = 787 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 288/788 (36%), Positives = 395/788 (50%), Gaps = 58/788 (7%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 MAK + +I G VQGVGFRPFV + A+ L + GDVCN G VEVR + + F Sbjct: 1 MAKKVLQTSRFKIFGIVQGVGFRPFVSRTAKALGITGDVCNKGSYVEVRAQGTKDALQDF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMN 117 +L + P A I + ++ + +F I +S + + + PD A CP C +E+ Sbjct: 61 RKKLEKEPPERAVILKILQDSTEKAPFFHDFQIIESAHESGDVFVSPDIAICPKCQSELF 120 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 +RRY +PFINCT CGPR TI+ AMPYDR T M AFP+CPAC EY RR+ AQ Sbjct: 121 DKSDRRYLHPFINCTSCGPRLTILDAMPYDRERTSMGAFPMCPACRYEYTHAETRRYDAQ 180 Query: 178 PVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 PV C +CGPH+ + G AA+ A L+ G IVA+KGIGGFHLACDARN AV Sbjct: 181 PVCCNDCGPHVYLL--GGEERDHAAITRARHVLQAGGIVAVKGIGGFHLACDARNEAAVQ 238 Query: 238 TLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR K RP KP AVML D L DA L PI+L++K ++ +A Sbjct: 239 RLREHKSRPQKPFAVMLRGLDAVRRECRLSDAQEAHLDNHQKPIILLEKSGSGKIAASVA 298 Query: 292 PDLNEVGVMLPANPLQHLLL------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 P + +GVMLP PL LL + LVMTSGN SG P +E AL L IA Sbjct: 299 PAMPSLGVMLPYTPLHLLLFSLPDELADFTDCLVMTSGNPSGAPICRMDEDALDALSSIA 358 Query: 346 DGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L H+R+I R DDSV+ + M+RRSRGY P L L F++ VL +G +LK Sbjct: 359 DLILSHDREIRLRADDSVMDFYDGAPYMIRRSRGYAPLPLMLSADFQD--SVLGIGGELK 416 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFCL + S +LGD+SD R+ L M+ + TP V D HP Y +S++ Sbjct: 417 NTFCLAKNSLFYPSPYLGDMSDLRTLRALRQTLPRMERLLAITPAAVAADLHPRYETSRF 476 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A + LP V HHHAH + +AE+ VI ++ DG G G +G +WGGE + Sbjct: 477 AETLGLPIFKVQHHHAHVLSVMAENDHL---SPVIGVSFDGTGYGTDGTIWGGEIMLATT 533 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ---QQNWSVLA 579 R+ + L L GGDLAA++ WR ++ + + + ++ + + Sbjct: 534 RDFQRLASLAPFFHAGGDLAAREGWRLAVSLLHLYCGREDALLHSKKLGLATEKEAASVI 593 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP---- 635 +E G++ +++S GR FDAV+A LG + +YEGEAA L+ A + + Sbjct: 594 FQLENGLHTTISTSAGRLFDAVSALLGIRRIS-TYEGEAAVYLQFAAEAAEKAGNSAQAD 652 Query: 636 --VTMPRVDNQL---------------------DLATFWQQWLNWQAPVNQRAWAFHDAL 672 + + D L DL Q+ + A AFH L Sbjct: 653 ALLARWKADGTLQATPAESAITITDGRFLLTSNDLFCHLLQYRLQNVSSDLLALAFHRGL 712 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGL 730 A + M G +T +GGV N LL + L F +L +P DGG+ Sbjct: 713 AAAIRDACKNAREMTGCSTAALTGGVFQNTLLLRLTQNALKKDGFHVLHHSIIPPNDGGI 772 Query: 731 SLGQGVIA 738 ++GQ + A Sbjct: 773 AVGQALFA 780 >UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B2JXA8_BURP8 Length = 791 Score = 890 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 290/781 (37%), Positives = 404/781 (51%), Gaps = 43/781 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQL 61 N ++R+ G VQGVGFRPFV+++A L G V ND DGV + + D Sbjct: 14 GGNGPTRWRVRVTGVVQGVGFRPFVYRIATSRALRGWVLNDADGVLIEVEGDAHALADFA 73 Query: 62 ---YQHCPPLARIDSVEREPFIWSQLPTE-FTIRQST-GGTMNTQIVPDAATCPACLAEM 116 PPLAR+ S++ TE F IR S G+ Q+ D+ C ACL EM Sbjct: 74 AALRSELPPLARVASLQSHCVAPLLDATERFVIRDSERSGSNLAQLPADSHVCDACLGEM 133 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P RRYRYPFINCT+CGPRF++I+A+PYDR T M AF +C C+ EYRDP +RR+HA Sbjct: 134 ADPANRRYRYPFINCTNCGPRFSLIKAIPYDRINTTMRAFTMCTRCEAEYRDPSNRRYHA 193 Query: 177 QPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 QP ACPECGP +E + + AL+AAI L+ G VA+K +GGFHL DARN +A Sbjct: 194 QPNACPECGPRVELYDADRMLSAGDDALRAAIDALRTGLTVAVKSVGGFHLVVDARNPDA 253 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LR RK R +KP A+M+ + + Q L +P PIVL+ K L ++ Sbjct: 254 VARLRDRKRRNSKPFALMMASVETARRWTDCSELEAQWLRSPGRPIVLLRKLNGVGLAEN 313 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +AP +GVMLP+ PL +LLL + P LVMTSGN+S P A NE+AL L ++D Sbjct: 314 VAPRNPNLGVMLPSAPLHYLLLSDPDLPALVMTSGNVSEFPIAYRNEEALVRLFEVSDLV 373 Query: 349 LIHNRDIVQRMDDSVVRESGE---------MLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 L+++RDI R+DDSV+R S RR+RG+ P + + +++ PV+ GA Sbjct: 374 LLNDRDIAIRIDDSVIRCSNHPQLPEPQISFFRRARGFAPYVIEV---GRSMAPVVAYGA 430 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 +LK T L E+ +SQH+GDL +D + + ++Y P D HP + S Sbjct: 431 ELKTTVALADRERIYVSQHIGDLGNDDTFRSHQTIASHLADLYRVKPTVAACDLHPSFRS 490 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 ++ A + ++ Q V HHHAH A+CLA++ G I + LDG G G +G WGGE Sbjct: 491 TRLASDTHVSRQQVQHHHAHMASCLADNGLD---GPAIGVILDGAGYGIDGTTWGGEFFI 547 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY----SETASVQQQNW 575 + R + G L ++L GGD A +P R LA L + A++ + Sbjct: 548 GDARAVQRAGHLRYLSLLGGDKAVHEPVRTALALALESFDGDEGMLACVPALAALGHEAR 607 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 V A +GIN ASS GR FD VAA G + YE E L A +T P Sbjct: 608 HVYATMWRKGINVTRASSMGRLFDGVAALAGVC-SRAEYEAHGPIEFEGLLARDLAMTEP 666 Query: 636 VTMPRVDN-----QLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMR 687 + +LD +Q ++ A + + FH + A+L + Sbjct: 667 YRYAFDPSADAPIELDYRPLVRQVVSDTAGSVELATISRRFHSTIVLAIASLCDLLRSRH 726 Query: 688 GITTLVFSGGVIHNRLLR--ARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + T+V SGGV N L A + F + + +P DGG++LGQ V+A+AR A Sbjct: 727 ALDTVVLSGGVFLNEFLLVNALVELRRRGFDVHAHRDVPTNDGGIALGQAVVASARITAE 786 Query: 746 E 746 Sbjct: 787 R 787 >UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Methanococcales RepID=HYPF_METJA Length = 766 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 266/755 (35%), Positives = 397/755 (52%), Gaps = 35/755 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHC 65 V+++++G VQGVGFRPFV+++A++ NL G V N G+ VE+ + ED F+ L Sbjct: 12 VRIKVKGIVQGVGFRPFVYRIAKKNNLKGYVKNMGNYVEILIEGKKEDIRNFINDLKNKK 71 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPGERR 123 PPL+RID ++ E + +F I +S I D A C CL EM +RR Sbjct: 72 PPLSRIDKLDIEEIKGIEEFDDFYIIKSENAKDEEEGTIPADVAICDDCLKEMLDKNDRR 131 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFI CT+CGPRFTI+ +PYDR T M FPLC C +EY++PLDRRFHAQ CP Sbjct: 132 YRYPFIACTNCGPRFTIVEKLPYDRENTSMRDFPLCEKCLEEYKNPLDRRFHAQATCCPI 191 Query: 184 CGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + E AE++ A++ + L+ G I+AIKGIGG HLAC + V LR R Sbjct: 192 CGPKVFLSDGKEIIAEKDEAIRETVKLLEEGHILAIKGIGGTHLACKVGEDDVVLELRKR 251 Query: 243 KHRPAKPLAVMLPV-----ADGLPDAARQLLTTPAAPIVLVDKKYV-PELCDDIAPDLNE 296 RP +P AVM + + + L + PIV++ K + +L+ Sbjct: 252 LGRPTQPFAVMSKIEYTELFAEFDEDEKNALLSLRRPIVVLKKSQDYDKYFSKYVSNLDT 311 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVM P + L +LL + + VMTS NL G P N++ L L GIAD FL+HNR IV Sbjct: 312 IGVMFPYSGLHYLLFDK-EIAYVMTSANLPGLPMVKDNDEILKKLNGIADYFLLHNRRIV 370 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVV++ + LRRSRG+ P+ + + LC+GA+L +T C+V+ ++ Sbjct: 371 NRCDDSVVKKVADRLVFLRRSRGFAPEPVKVNINNNKNI--LCVGAELNSTACIVKRDKF 428 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAREM----NL 468 L+Q++G+ S R+A+ + + + +V D HP + S++ A E+ Sbjct: 429 YLTQYIGNTSKYETFCYLRDAINNILRLTNTNKIDAIVCDLHPQFNSTKLAEELSEKFGA 488 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HH AHA + L ++ + D I L+LDG+G G +G +WGGE L + E + Sbjct: 489 EIFRVQHHFAHAYSLLGDNNY---FDDAIILSLDGVGYGLDGNIWGGEVLLFKDGKMERV 545 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSETASVQQQNWSVLARAIERGI 586 G L GGDLA K P R LL+ + + E + ++ +L +E+ + Sbjct: 546 GHLEEQYQLGGDLATKYPLRMLLSILYKAIGEEAFDFIKRYNFFSEKELRLLKFQLEKKL 605 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N P+ +S GR DAV+A LG +Y+GE + LE +A G + +N L+ Sbjct: 606 NCPITTSTGRVLDAVSALLGICFEK-TYDGEPSIRLEPVANRFKG-DINIEPKIKNNILN 663 Query: 647 LATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 + L + A H +A G + ++ + GI T+ +GGV +N++ Sbjct: 664 TTELIYKSYEMLLNNENKEKIAHFAHIYIADGLFEIAKKISNKFGINTIGITGGVSYNKI 723 Query: 704 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 + R+ + F ++ Q +P GDGG+S GQGV Sbjct: 724 ITERIMNNAKREGFNFIYHQRVPNGDGGISFGQGV 758 >UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein HypF n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000187434E Length = 802 Score = 886 bits (2290), Expect = 0.0, Method: Composition-based stats. Identities = 292/791 (36%), Positives = 400/791 (50%), Gaps = 59/791 (7%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQ 63 ++ RI G VQGVGFRPFV +A++ L G ND GV + + + F QL+ Sbjct: 16 QRIRWRIEGIVQGVGFRPFVATIARRAGLVGFCGNDEQGVFIEVEGTSDALAAFCSQLFT 75 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGER 122 P LARI + EP EFTI S + + PD A CP C E P Sbjct: 76 ELPALARIINHSAEPVAVLGHEHEFTIVPSRHSYSGRALLPPDTALCPDCRREFFDPTNP 135 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFI+CT+CGPR +II +PYDRP T MAAFP+C C++EY DP DRR+HAQP++C Sbjct: 136 RYLYPFISCTNCGPRLSIITELPYDRPRTTMAAFPMCTPCEREYTDPTDRRYHAQPISCF 195 Query: 183 ECGPHLEWVSHGE------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +CGP L W G+ E A + A A L G ++A+KGIGGFHL CDA N A Sbjct: 196 DCGPRLSWHDAGDTTTATSREEVLALFRRAHALLDDGALLAVKGIGGFHLVCDATNDAAC 255 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR RK RP KPLAVM P D L + ++ L +P APIV+ K+ L + I Sbjct: 256 EKLRLRKRRPDKPLAVMAPTVDTAAQLVELTEQEKRFLDSPEAPIVIAPKQRSGPLSNLI 315 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP L+ G+MLP + + LL PLV+TSGNLSG+P N AL L IAD F++ Sbjct: 316 APGLDSFGIMLPYSGIHLLLCDR---PLVVTSGNLSGEPVCTDNADALKKLGHIADAFIL 372 Query: 351 HNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPP---------------------GFK 389 H+R+I ++DSV + RRSRG+ P +++ Sbjct: 373 HDREIHVPVEDSVFIGTAPS-RRSRGFAPIPVSITATDSRSHTSTGPGSATGPGISVRCT 431 Query: 390 NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYV 449 + P + G +LKNTF + G+ A +S H+GD+ Q ++ A+ + ++ D TP+ V Sbjct: 432 SQPTIFATGGELKNTFAIAHGDLAHVSAHIGDMGSWASQKAYQRAVDQLLSMRDATPELV 491 Query: 450 VHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDG-GDVIALTLDGI 504 V D HPGY ++ ++A E ++ V HH AHA + LAEH+ + TLDG Sbjct: 492 VCDLHPGYATTAFAERFAAEHDIELLAVQHHFAHALSLLAEHRLLSPNADRAVVATLDGT 551 Query: 505 GMGENGALWGGECLRVNYR--ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G G +G++WGGE L ++ E P L GGD A PWR L + + Sbjct: 552 GYGTDGSIWGGEILTLSRSSANWERTWHCPTFPLVGGDRAVTHPWRLALGLTHAWELD-D 610 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAAL---GCAPATLSYEGEAA 619 ++ ++ +++ + G+ SS GR FDA AA L +SYE +AA Sbjct: 611 DHLLRNLSNEREVALVKSQLATGVGTVQTSSLGRIFDAAAALLLPRWRGGGAISYEAQAA 670 Query: 620 CALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQA--PVNQRAWAFHDALAQGFA 677 LEA A + +H + V ++ + A V Q A+ FH +A Sbjct: 671 MELEAAATR-YVRSHAEALGAVSSETKSEHLQEVIREAVASPDVEQAAFVFHSGVAGLVG 729 Query: 678 ALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQG 735 + + A G + SGG +N LL L H +A FTLL Q +P GDGGLSLGQ Sbjct: 730 KRLVQAAEKSGTDVVGVSGGCANNALLMELLRHEVATEGFTLLQHQIVPPGDGGLSLGQA 789 Query: 736 VIAAARWLAGE 746 V A R LA Sbjct: 790 V--AGRLLAAT 798 >UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT71_ACIBL Length = 740 Score = 885 bits (2288), Expect = 0.0, Method: Composition-based stats. Identities = 286/747 (38%), Positives = 382/747 (51%), Gaps = 35/747 (4%) Query: 16 KVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCPPLARID 72 VQGVGFRPFV++LAQ +L G V N GVE+ L E F+ +L PP A I Sbjct: 1 MVQGVGFRPFVYRLAQTHHLAGWVRNGEQGVEIFLEGAEPSVERFVEELETEAPPAASIS 60 Query: 73 SVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINC 131 VE +P + +F IR+S ++ PD C CL E+ P +RRY YP+INC Sbjct: 61 QVEVDPAKP-EGFLDFAIRESERIDRPTVRVSPDLPVCDECLRELFDPADRRYLYPYINC 119 Query: 132 THCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWV 191 T+CGPR+T++ +PYDRP T M +PL C EY DP +RRFHAQPVAC ECGP Sbjct: 120 TNCGPRYTVVLGLPYDRPKTTMKDWPLDAYCRGEYGDPANRRFHAQPVACAECGPTYFLQ 179 Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLA 251 E AA++ L+ GKI+A+KG+GG+HLACDARN NAV LR RK+R KP A Sbjct: 180 IGDERIFGAAAIERTAEILRDGKILAVKGLGGYHLACDARNGNAVRALRERKYRKEKPFA 239 Query: 252 VMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 VM + L + R+LLT A PIVL K +AP+ +E+GVMLP P Sbjct: 240 VMARDVEIAAQIVELSNETRELLTGIARPIVLARAKQQF---PGVAPENHELGVMLPYTP 296 Query: 306 LQHLLLQE-LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 L HLL LVMTS N S +P A + A+ L GIAD FLI +R I +R+DDSV Sbjct: 297 LHHLLFASGAPEVLVMTSANRSSEPIAYEDADAIESLVGIADAFLIGDRPIARRVDDSVA 356 Query: 365 RE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGD 421 R +LRR+RGY P A+A P + P+L LGADLKN LV QA +SQH+GD Sbjct: 357 RVGAYGPAILRRARGYAPGAVATIPCER---PILALGADLKNALTLVVDGQAFVSQHIGD 413 Query: 422 LSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQWAREMNL-PTQTVLHHHA 478 L + E +R + +Y+ +VHDAHP Y ++ A ++ V HH A Sbjct: 414 LEHYTAFQAFEETIRDLLAMYEVKMDEVLLVHDAHPQYRTTLHAAQIAAKKKVAVQHHRA 473 Query: 479 HAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECEHLGGLPAVALP 537 H A+ LAE V+ ++ DG G G++G +WGGE + E + L LP Sbjct: 474 HIASVLAERG--EWNRCVVGVSFDGTGWGDDGTVWGGEIFAGSVHEGFERVAHLRPAVLP 531 Query: 538 GGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 GGD AA+ P A L + + + + + + + + +S GR Sbjct: 532 GGDAAAEFPV-QAAAGFLAQLGDLPDLCAAPFNFPERFRAARELVTKNVRCFGTTSMGRL 590 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW 657 FD AA +G T +YEG+AA +E LA P D +LD + Sbjct: 591 FDTAAALIGFTRET-TYEGQAAIWVEQLARRT-AHRDGFEFPYTDGELDFRPLLTAVIQS 648 Query: 658 ---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA- 713 + A F +A G + +R +G T+V SGGV N LL L L Sbjct: 649 RLTGVALETIARRFQVGVAHGISECLRTICKEQGAKTVVLSGGVFQNELLLGDLKPQLDV 708 Query: 714 -DFTLLFPQSLPAGDGGLSLGQGVIAA 739 + + +P DGG+SLGQ +AA Sbjct: 709 LGLEVWTNRMVPTNDGGISLGQAAMAA 735 >UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA36_9ACTN Length = 823 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 314/815 (38%), Positives = 398/815 (48%), Gaps = 82/815 (10%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHC 65 V + + G VQGVG RPFV++ A + G V N GDGV + + F+ L +H Sbjct: 4 VHIHVTGIVQGVGMRPFVYREAMAHGICGWVLNAGDGVHIEAHAPADALDAFVAALSEHA 63 Query: 66 PPLARIDSVEREPFIWSQ----LPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPG 120 P AR++ VE + F I S T T + PD ATC CL E+ P Sbjct: 64 PAAARVEYVEVVDLAANGWDAANEQGFRIVASQDQTAHTTLVSPDIATCNDCLRELFDPA 123 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRY YPFINCT+CGPRFTIIR++PYDR T M FP+CP C EY DPLDRRFHAQP A Sbjct: 124 DRRYHYPFINCTNCGPRFTIIRSLPYDRAATSMDCFPMCPRCAAEYADPLDRRFHAQPDA 183 Query: 181 CPECGPHLEWVSHGE----------------HAEQEAALQAAIAQLKMGKIVAIKGIGGF 224 C +CGPH+ W +A ++ + L G IVAIKG+GGF Sbjct: 184 CFDCGPHITWREAVNGDACGNSSATPAVGTTREASDAIIERCVELLASGGIVAIKGLGGF 243 Query: 225 HLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLV 278 HLACDA N AVA LR RK R KPLAVM+ + DA R+LL PIVL+ Sbjct: 244 HLACDAANEQAVAELRRRKRRSNKPLAVMVRSLADAGRLCHIDDAERELLAGSIRPIVLL 303 Query: 279 DKK----------YVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC----PLVMTSGN 324 ++ L +A DL E+GVMLP PLQHLLL + LVMTSGN Sbjct: 304 RRRAVCESNGGSPDAFALAPSVAHDLPELGVMLPYTPLQHLLLAAAEACGMHALVMTSGN 363 Query: 325 LSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVP 379 LS +P ++ A L GIAD L ++R I+ R DDSVVR + +RR+RGY P Sbjct: 364 LSEEPIETDDDLAWEHLVAAGIADALLGNDRAILSRYDDSVVRVVDGAIMPVRRARGYAP 423 Query: 380 DALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ-----AVLSQHLGDLSDDGIQMQWREA 434 L LP VL G K T L R +SQH+GD+ + G W A Sbjct: 424 QPLPLPALDGAPSCVLACGPQQKATIALAREGTNGEAPCFVSQHIGDVENGGTFDAWNAA 483 Query: 435 LRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAE---H 487 +++++D P + D HP Y+S QWARE NLP V HHHAH A+ +AE Sbjct: 484 RTRLEDLFDLAPAALACDVHPSYLSGQWAREQARKCNLPLVEVQHHHAHIASVMAEAIAA 543 Query: 488 QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPW 547 V+ + DG G G +G +WGGE L + E L ALPGG + + Sbjct: 544 GQLTTDARVLGIAFDGTGAGADGTIWGGEFLVASLGGFERAAHLRTWALPGGAASVRDAR 603 Query: 548 RNLLAQC--LRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAAL 605 RN A L + S+ +Q SV A IERGIN+P SS GR FDA AA L Sbjct: 604 RNAFALLSELGLLEHPGAARLLDSLDEQTRSVTATMIERGINSPRTSSMGRLFDAAAAIL 663 Query: 606 GCAPATLSYEGEAACALEALAASC----------HGVTHPVTMPRV---DNQLDLATFWQ 652 G +YEGE A LEA A + + P LD ++ Sbjct: 664 GICDKA-TYEGEPAIELEAAAWRALDNEIARFPDDNAGYFASGPSWLDGPYVLDQKALFE 722 Query: 653 QWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 L A ++ A FH A+A+ A + E GI T+ SGGV NRLL L Sbjct: 723 ALLGGIEAGASADRLALDFHVAVARSSARIASEICVHEGIDTVALSGGVFMNRLLLQLLT 782 Query: 710 HYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 L T+L P S+P DG ++ GQ +A R Sbjct: 783 RELKSMGLTVLVPHSVPVNDGCIAYGQAAVARTRL 817 >UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legionella RepID=C6N6M1_9GAMM Length = 744 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 276/762 (36%), Positives = 397/762 (52%), Gaps = 50/762 (6%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE-TFLVQLYQ 63 +QL I+G+VQGVGFRP V+++A QL L G V N+ GV + ++ F+ L + Sbjct: 2 KLERLQLIIQGQVQGVGFRPCVYRVANQLRLTGWVQNNASGVLIEVQGTLACEFIPHLKE 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 + PPLA+I +++ + F I +S G NT I PD C CL E+ P R Sbjct: 62 NLPPLAKISTIQLKTIPLKINEVFFEIIESAKGKANTIISPDTCICSECLQELFDPQSRY 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF+NCTHCGPRF+I + +PYDR T M FPLC C+ +Y +P +RR+HAQP AC Sbjct: 122 YRYPFLNCTHCGPRFSITQTLPYDRCQTSMGLFPLCQDCNADYTNPDNRRYHAQPTACAN 181 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L ++ ++ G+I+A+KG+GG+ L CDARN + LR RK Sbjct: 182 CGPQLSL-----------PVENIAQRILQGEIIALKGLGGYQLICDARNEITLLKLRERK 230 Query: 244 HRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELC-DDIAPDLNE 296 +R KPLA+M+ + + A+ LL PA PIVL+ KK D IAP L+ Sbjct: 231 NRATKPLALMVANSKSAEQIVAISEQAQILLERPARPIVLLQKKNGVSRSIDKIAPGLSH 290 Query: 297 VGVMLPANPLQHLLLQELQC--------------PLVMTSGNLSGKPPAISNEQALADLQ 342 +GVMLP PL +LL LV+TS N +G+P I + +A +++ Sbjct: 291 LGVMLPYTPLHYLLFNAFAENVDGCGWLDELQSMILVVTSANSAGEPIVIEDHRAKIEIK 350 Query: 343 GIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 AD + +NR I+ R DDSV R ++RRSRG+VP + LP +PP L +G Sbjct: 351 TQADKIVSYNRRIITREDDSVARLINNKPMLIRRSRGFVPTPIQLP---YTIPPTLAVGG 407 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 LKNTF + RG +A +SQH+G L++ + E+L + N D P+ + HD HP + + Sbjct: 408 HLKNTFSITRGNEAFVSQHIGSLNNKATIDFFHESLTHLLNFLDVKPERIAHDMHPDFYT 467 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 +++A+ +P + H A A V+ L LDG G G NG WGGE + Sbjct: 468 TRFAQHYGVPAFAIQ---HHHAHLAAVAAEHGIQQRVLGLALDGYGYGLNGEAWGGELML 524 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 + CE LG + PGG++AA++PWR + R + + Q + Sbjct: 525 LEQASCERLGSFYPLPQPGGEIAAREPWRMAASVLHRLGRGKEISKRFSGCTQ--AKAIH 582 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + +++ IN+PL SSCGR FDA +A LG + YEG+AA LE+L H P Sbjct: 583 QLLDKKINSPLTSSCGRLFDAASALLGVQLMSQ-YEGQAAMRLESLVTQLHIA--PNGWR 639 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 DN D+ + L+ P+ A FH L G + ++ +R I +V SGG Sbjct: 640 IKDNNFDMLPTLELLLDIACPIA-GANLFHGTLIAGLSTWIKGMCRVRRIDMVVLSGGCF 698 Query: 700 HNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAA 739 N++L L L + + P+ LP DGG+SLGQ IA Sbjct: 699 LNQILAEGLTKALCESGIKSFLPRDLPPNDGGISLGQAWIAG 740 >UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBV8_9PROT Length = 727 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 246/750 (32%), Positives = 375/750 (50%), Gaps = 53/750 (7%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCP 66 + I G VQGVGFRP V+++A LNL G V N DGV + + + + FL +L + P Sbjct: 2 RYKYIINGIVQGVGFRPTVYKIATSLNLKGYVLNSSDGVIIEIEGKNRDKFLNELKNNLP 61 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA+I+ +E +F I+ S T T I PD + C CL EM RRY Y Sbjct: 62 PLAKIEKIECFKLPLKN-YKDFEIKYSINTTKTTSISPDISVCEDCLKEMRDKNNRRYLY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TII +PYDR T M F +C C KEY +P++RRFHA+P++C ECGP Sbjct: 121 PFINCTNCGPRYTIIENIPYDRVNTSMKKFKMCENCKKEYENPIERRFHAEPISCYECGP 180 Query: 187 HLEW---VSHGEHAEQE-----AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 L + +G+ A ++ ++ ++K GKIVAIKG+GGFHL CDA N +V Sbjct: 181 KLSVKFKIENGKWAVKDFNREIKKIEFIANKIKEGKIVAIKGLGGFHLVCDATNEKSVYE 240 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK+RP KP A+M + + + ++L+ + PIV+V KK IA Sbjct: 241 LRKRKNRPLKPFAMMFRDIEMIKKYADISNKEKELILSKERPIVIVKKKKE---LKGIAD 297 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 ++ GV LP P+ +LL L P+V TS N+S +P ++++ + L + D L +N Sbjct: 298 KIDRYGVFLPYTPIHYLLFDFLDFPIVATSANISDEPIIRNSKELIEKLGSVVDFILDNN 357 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDI+ DDSVV+ E +R SRG+ P + + K P +L LGA+ KNT L Sbjct: 358 RDIINACDDSVVQVVNEERLFMRLSRGFAPKSFYIDK--KTSPNILALGANQKNTISLYF 415 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 ++ +LS H+GDL G + + + +Y+F ++ D HP Y S++WA N Sbjct: 416 NQKVILSPHIGDLKTLGSIEFFERTINTFRRLYEFKEDVIICDKHPYYESTKWALSQNKE 475 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 + HH +HA + + E+ G+ +A DG G G++G++WGGE RV E + Sbjct: 476 VIQIQHHFSHALSVMFENSLD---GEFLAFLFDGTGYGDDGSIWGGEVFRVTKHNYERIH 532 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQC-LRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 + L G + K P ++ + ++NY +Q + Sbjct: 533 YIKPFKLIGSEKGVKNPSNYAISLIDEQLAKNFKNYEIIKKLQNGPF------------- 579 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 PL SS GR FDAVA G YEG + +E + + + +LD Sbjct: 580 PLTSSMGRVFDAVAFLSGMIDRN-EYEGISGLIIEKFYNENIKGFIDIGIKK---ELDFK 635 Query: 649 TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL 708 + + + F ++L L+ + + + ++ SGGV N+ L ++ Sbjct: 636 EIFNFAYLNRGKFELVSSIFINSLVN----LVVKLSKYYNL-PVILSGGVFQNKTLLGKI 690 Query: 709 AHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 L + + + +P DGG+S+GQ Sbjct: 691 ---LKNIYAYYNKEIPINDGGISIGQVAYG 717 >UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=Wolinella succinogenes RepID=Q7M9N8_WOLSU Length = 713 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 255/713 (35%), Positives = 363/713 (50%), Gaps = 38/713 (5%) Query: 51 REDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATC 109 + E F+ + Q+ P A+IDS + E T F IR S I+P D + C Sbjct: 8 QNTLEEFIQAIRQNKPRNAKIDSFKVESDEKLVGYTSFEIRDSVNMGGKCAILPADTSIC 67 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 P CL EM+ P +RRY YPFINCT+CGPR+TII+ +PYDRP T MAAF +CP C KEY DP Sbjct: 68 PDCLREMHDPKDRRYLYPFINCTNCGPRYTIIKELPYDRPKTSMAAFEMCPECQKEYNDP 127 Query: 170 LDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 RRFHA+P +CP CGP L AE A++ +K G IVA+KGIGGFHL Sbjct: 128 TSRRFHAEPNSCPHCGPKLTLYRSNGTPLAEGAKAIETLCKLIKKGHIVAVKGIGGFHLV 187 Query: 228 CDARNSNAVATLRARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKK 281 CDA + V LR RK RP KP AVM L + +P PIVL+ K+ Sbjct: 188 CDATKNRVVMELRERKKRPTKPFAVMFRSVFEIGKCTELSPIEEATILSPERPIVLISKR 247 Query: 282 YVPEL------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE 335 L CD +AP + +GV LP +PL LL+++ + PLV TS NLSG+P + Sbjct: 248 RPHRLEKFLISCDGVAPRVGTMGVFLPYSPLHSLLMEQAKIPLVFTSANLSGEPLIRDFK 307 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVP 392 + L G+ D +L H+R+I+ DDSVV +++RR+RGY P + LP + Sbjct: 308 ELCEKLSGVFDYYLDHDREILNPCDDSVVTIQNNKFQVIRRARGYAPSNVLLPFELEEG- 366 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 VL LGA K+T L G A+LS H+GDL + + + + ++Q IY+FTP+ +V D Sbjct: 367 -VLALGAQQKSTLALAFGSNAILSPHIGDLDNPSSESYFHQTREVLQGIYEFTPKIIVSD 425 Query: 453 AHPGYVSSQWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGA 511 HP Y S++WA ++ + V HH+AH + L+EH+ ++ + DG G G++G Sbjct: 426 KHPDYESTRWALKQKDSQVLQVQHHYAHMLSLLSEHKVK---EKILGVIWDGTGYGDDGR 482 Query: 512 LWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETA 568 +WGGE ++ E G L GG+ A K+P + L+ + + Sbjct: 483 IWGGEFFVGDFHGYERAGHFKEFRLLGGESAIKEPKKLALSLMFDLYGKEALNLKHPVVN 542 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 S L + ++GIN+PL+SS GR FDA+AA +G +++EGE LE L Sbjct: 543 SFSHDELETLYKMHQKGINSPLSSSVGRLFDAMAAMIGVVD-RVTFEGECGMVLEGLYNP 601 Query: 629 -CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 +P + + +D+ L + A F + LA + R Sbjct: 602 DFEAERYPYLVQ--EGVVDIHPMLLAILEGGEEASLVATKFINTLAHIALEVARIHR--- 656 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 + FSGGV NR L ++ + +P DGG++LGQ A Sbjct: 657 --LPVGFSGGVFQNRELCTKIERLFQNEGLPYYMHEKIPCNDGGIALGQVAFA 707 >UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobacteraceae RepID=A6E4D3_9RHOB Length = 737 Score = 882 bits (2281), Expect = 0.0, Method: Composition-based stats. Identities = 332/737 (45%), Positives = 423/737 (57%), Gaps = 24/737 (3%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCP 66 G ++R+RG+VQGVGFRP++WQLA+Q+ L G V ND +GV + F+ + + P Sbjct: 4 GWRIRVRGQVQGVGFRPYIWQLARQMGLRGRVFNDPEGVLIEAAGAQLAAFVAAIPERAP 63 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LAR+D+V E LP F I S G T++ PDAA+CP C+AE+ PG RR Y Sbjct: 64 VLARVDAVLHE-VAVFDLPEGFEIAPSRGVGAETRVTPDAASCPDCVAEVFAPG-RRQGY 121 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F NCTHCGPRFTI++ +PYDR T MAAFP+C AC EY DP DRRFHAQPVACPECGP Sbjct: 122 AFTNCTHCGPRFTILQGLPYDRARTTMAAFPMCAACRAEYEDPADRRFHAQPVACPECGP 181 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + G A+ A+A L+ G +A+KG+GGFHLACDA + AVA LRARK RP Sbjct: 182 RVWLEPGGG-----DAVAGAVAVLRAGGSIAVKGLGGFHLACDAGSGEAVARLRARKRRP 236 Query: 247 AKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 KP A+M + + + LL PAAPIVL+ K+ L D +AP +G ML Sbjct: 237 GKPFALMGTLAMIRAVCAVSEEEAALLRDPAAPIVLLRKRAE-VLPDVVAPGQAVLGWML 295 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P PL HLL+ E PLVMTSGNLSG+P I NE+A L G D FL+H+R I +R+DD Sbjct: 296 PYTPLHHLLIAEFGGPLVMTSGNLSGEPQVIGNEEAREKLGGFVDAFLMHDRVIARRLDD 355 Query: 362 SVVRESGEML-RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 SV R M+ RR+RG VP L LP GF+ P VL G +K CLV+ QA+L HLG Sbjct: 356 SVERAHPPMVLRRARGRVPGTLPLPVGFEGAPQVLAYGGQMKAALCLVKSGQALLGHHLG 415 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 +L + + A ++D P+ V D HPGY ++Q A +P V HHHAH Sbjct: 416 ELDEALTWEAFLAAEADYAALFDHRPEVVACDPHPGYRATQAAHARGVPVIEVQHHHAHM 475 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AAC+AE+ WPL G V + LDG+G+G +G +WGGE L +Y E G L VA+PGGD Sbjct: 476 AACMAENGWPLAAGRVAGIVLDGVGLGPDGTIWGGEVLLGDYLGFERRGWLTPVAMPGGD 535 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 A+++PWR LAQ + + +VL +AI G+NAPL SS GR FDA Sbjct: 536 RASREPWRVALAQL---DAAGLGHLADELFGTRPLAVLRQAIRAGVNAPLTSSAGRLFDA 592 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQA- 659 AAALG +YEGEAA LEA A +P + V+ ++ A WQ W +A Sbjct: 593 FAAALGF-EGAQTYEGEAAMGLEARAVLGDVGAYP--LGGVEGVIETAPLWQAWAQDRAA 649 Query: 660 --PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL 717 A F LA+GFAA R + SGG N LL L D + Sbjct: 650 GVAPEVMAGRFQAGLARGFAARARALIASGEAQAVALSGGCFQNALLLDLTLAALGDVPV 709 Query: 718 LFPQSLPAGDGGLSLGQ 734 L + PA DGGL+LGQ Sbjct: 710 LIHRGTPANDGGLALGQ 726 >UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3I5_LISDA Length = 786 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 279/787 (35%), Positives = 398/787 (50%), Gaps = 70/787 (8%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPP 67 + + G VQGVGFRPFV+QLA + L G V ND +GV++ + E F+ QL + PP Sbjct: 7 IHVTGIVQGVGFRPFVYQLALEYQLLGWVINDSEGVKIDAQGTVEQLTQFVEQLERQAPP 66 Query: 68 LARIDSVEREPFI---WSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERR 123 L+RID +E +Q PTEF I++S + + I PD C ACLA++ P R Sbjct: 67 LSRIDHIEITVLPSWNKAQCPTEFAIQESCERESTSVSISPDQGVCQACLADLEDPRSRY 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NCTHCGPR++II+A+PYDR T MA F C C++ Y++PLDRR+HAQP++C Sbjct: 127 YHYPFTNCTHCGPRYSIIKALPYDRCHTSMANFQFCQPCEQAYKNPLDRRYHAQPISCEH 186 Query: 184 CGPHLEWVSHGEHAEQ---EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + W H E A+++ Q+ G +VA+KG+GGFHL CDA ++ AV LR Sbjct: 187 CGPWVSWHQHSTAETDSVGEQAIESLAKQILAGGVVALKGLGGFHLICDASDNVAVERLR 246 Query: 241 ARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 KHRP KPLA+M+ D Q L PIVL+ K L ++AP++ Sbjct: 247 QYKHRPKKPLAIMVQSLSDARVFAQGCDKEWQTLDEQKRPIVLLKKNRESILAPNLAPNV 306 Query: 295 NEVGVMLPANPLQHLLLQEL-------QCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +G+MLP PL LL +L LVMTS N SG P A E+ +A DG Sbjct: 307 PYLGIMLPYTPLHFLLFAKLAELKPHTPHALVMTSANRSGLPIATCFEEVIAQFGTELDG 366 Query: 348 FLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L HNR I+ DDS V+ + +LR +RGY P + + L +GA K + Sbjct: 367 ILNHNRPILHACDDSLVHVIDDKVHVLRMARGYAPFSRFADTHNQAT---LAMGAQQKAS 423 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 L +Q +LS +GDL + +M+++EA++ ++Y +PQ +V D HPGY S++ A+ Sbjct: 424 IGLALPQQWMLSPFIGDLDNVDNEMRYQEAIKTFTSLYHVSPQRIVCDYHPGYRSTELAQ 483 Query: 465 EM-----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 M ++ + HHHAH A +AEH V+ T DG G GE+ +WGGE L Sbjct: 484 RMVTDDSSISLTQIQHHHAHVLAVMAEHNLT---EQVLGFTFDGTGYGEDETVWGGEVLL 540 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ----NW 575 + + + L + L GG+ A K+P R LLA L F+ Q S + Q Sbjct: 541 ADTHNFKRVASLRSFRLLGGEQAIKEPARLLLAILLEFMSIEQVCSLQEKLFPQWTSATL 600 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTH 634 L + + G +P SS GR DA+A LG +SYEGEA LE A S + + + Sbjct: 601 ENLYQLWQSGSRSPYTSSMGRLIDAMAYLLGVL-ERVSYEGEAGLLLEQAALNSQYELLY 659 Query: 635 PVTMPRVD--------NQLDLATFWQQWLNWQAPV-------NQRAWAFHDALAQGFAAL 679 P+ + +D ++ L+ + V N+ A AF +AQ L Sbjct: 660 PLPELSLVSLNAQSDFTVIDWQPCFESVLSCRLSVAFNQMLQNRLAHAFLRNIAQSIFTL 719 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT--------LLFPQSLPAGDGGLS 731 + LV SGGV NR++ + + + +P DGG++ Sbjct: 720 AENYPAL----PLVLSGGVFQNRIILQSAYTLASARDSALQQKQPIYSGELIPVNDGGIA 775 Query: 732 LGQGVIA 738 GQ A Sbjct: 776 AGQLWYA 782 >UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM01_9BACT Length = 745 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 257/746 (34%), Positives = 370/746 (49%), Gaps = 28/746 (3%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 ++++G VQGVGFRPF+++LA L G V N GVE+ + + E F + Sbjct: 2 KTFNIKVKGIVQGVGFRPFIFRLAGTHGLKGFVTNSSSGVEIEVNGEKQQIEDFASDIQT 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 CPPLA I V E + + F+I S + T + PD A C C EM+ P +RR Sbjct: 62 KCPPLAHIIEVTIECIPFREFE-MFSIEPSKITSGITLVPPDTALCDECAKEMDDPADRR 120 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NCT+CGPR++II+ MPYDRP T M+ F +CP+C KEY DP DRRFHAQP ACP Sbjct: 121 YNYPFTNCTNCGPRYSIIKKMPYDRPDTTMSKFRMCPSCQKEYDDPADRRFHAQPNACPV 180 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + + A+ A + G I+A+KG+GG+HL CDA V TLR K Sbjct: 181 CGPMVYL----GKNAGQDAIDHAAEIIDSGGIIAVKGLGGYHLICDATQDIPVKTLRNLK 236 Query: 244 HRPAKPLAVM--LPVADGLPDAA--RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 RP KPLAVM D A +L +P APIV++ K + P VG Sbjct: 237 KRPDKPLAVMCSYETIQKYCDDAPSLKLFCSPQAPIVIM-KVPDLPVSAFANPMSPNVGC 295 Query: 300 MLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 + P PL +L++ + L+ TSGN +P A +A L FL H R I R Sbjct: 296 IAPYTPLHRVLMKTCKSDFLIATSGNRKDEPIAKDEREAEKALSEFTSHFLHHTRPIHNR 355 Query: 359 MDD---SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DD SVV ++RR+RG+ P + LP VL LGA LKNT + + A + Sbjct: 356 VDDSLVSVVDGMPYVMRRARGFAPYPVMLPSAVNG--CVLALGAHLKNTITIAKDNYAFV 413 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLH 475 SQ++GDL + + E + M+ +Y P VV D HP Y S+ +A + LP Q V H Sbjct: 414 SQYIGDLDNPDTCEFFEETIDKMKMLYGLEPDSVVCDMHPNYHSTGFAESLGLPVQRVQH 473 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H +H AC+AE+ +V+ + LDG G+G +G +WGGE L + R+ LP V Sbjct: 474 HISHMMACMAENGLK---DNVLGVVLDGTGLGTDGTIWGGEFLLMKNRKISRPQHLPKVM 530 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETASVQQQNWSVLARAIERGINAPLAS 592 PG D AK P R L++ F + ++ + +++ + IE+ IN + Sbjct: 531 QPGMDGGAKNPGRMLISYLHHFGILERYMETLTKKLFIPEKDIKLTVSMIEKNINCIPTT 590 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-QLDLATFW 651 S GR F+++ AA+ L +E +A +E LA S H VT D+ ++ + Sbjct: 591 SAGRLFESLGAAVTGVTKNL-FEAHSAMKMEGLAHSADRKYHKVTDTDSDDFYRNVFEYT 649 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + A H + ++ + + +V SGGV N L L Sbjct: 650 LNSVQANENPQIIAADIHSNFVKHIIFCIKNICNIEEVGDVVLSGGVFQNLFLTKELTK- 708 Query: 712 LADFTLLFPQSLPAGDGGLSLGQGVI 737 ++ + +++P D +SLGQ Sbjct: 709 VSRLNIHRHKAVPPNDSCISLGQAYY 734 >UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=Q13HK4_BURXL Length = 812 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 311/774 (40%), Positives = 419/774 (54%), Gaps = 48/774 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 G +R+RG VQGVGFRP VW+LA + G VCNDG+GV +R D E F+ L+ Sbjct: 20 GEAIRVRGLVQGVGFRPAVWRLAHDCGVSGTVCNDGEGVLIRAWADRPVLERFVAGLHGR 79 Query: 65 CPPLARIDSVEREPFIWS-QLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 CPPL RIDSVER P EFTI +S GG +T +VPDA TC ACL E P RR Sbjct: 80 CPPLGRIDSVERRAVPDVAPAPGEFTIVESGGGPAHTGVVPDAVTCRACLDETLDPSGRR 139 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF NCTHCGPR +I+ A+PYDR T MAAFPLC AC +EY DP DRRFHAQ VACP Sbjct: 140 YRYPFTNCTHCGPRLSIVGAIPYDRCATTMAAFPLCGACRREYDDPGDRRFHAQAVACPA 199 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + E+ L+ A L++G IVAIKG+GGF LAC A AV LR K Sbjct: 200 CGPRIWIEQADGSRERGDPLEVACRYLRLGGIVAIKGLGGFQLACMATAQAAVTKLRVLK 259 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCD--DIAPDLN 295 HR KP A++ + +A LL + A PIV++ D +AP Sbjct: 260 HRARKPFALLARDVTMAERYCSVSNADAALLRSAAGPIVIMPAIGRTTAADLSGVAPGTA 319 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +G MLP+ PL HL+++ L P+V+TSGN++ +P +N+ A L G+AD FL+H+R+I Sbjct: 320 TLGFMLPSTPLHHLIMRALDAPIVLTSGNVADEPQCTANDDARIRLAGMADVFLMHDREI 379 Query: 356 VQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 R+DDSV R +LR SRGY P L +P F PPVL +GA KN FCL+R + Sbjct: 380 ASRIDDSVARVLHGVPRLLRSSRGYAPAPLRMPHDFAAAPPVLAMGAQQKNAFCLLREGE 439 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNL 468 A++S H+G+L + ++ +L + ++ + V D HP Y+S + AR+ +L Sbjct: 440 ALVSHHIGELENGETYRDYKASLARYEKLFGHDARVVAVDLHPEYLSRKLGIDIARQRSL 499 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P + HHHAH AACLAE+ L ++ + LDG GMG + LWGGE L Y +C + Sbjct: 500 PLAEIQHHHAHFAACLAENDIGLASN-ILGVVLDGHGMGTDRRLWGGEFLLGGYVDCTRV 558 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAI 582 L VALPGG A +PWRN A + + + + ++L + I Sbjct: 559 ASLTPVALPGGMRAVLEPWRNTYAHLRASLGWEWVARRYAKLDLVRFLAGRPLALLEQMI 618 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS------CHGVTHPV 636 E G+N+P++SS GR FDAVAAA G + YEG+AA EAL + +P Sbjct: 619 EGGVNSPVSSSAGRLFDAVAAAAGVCRERVQYEGQAAIEFEALIDRRTLHDEDDALAYPF 678 Query: 637 TMPRVDNQ-----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMR- 687 + + +D W L+ P A FH +++ R Sbjct: 679 RIGEASDAAYPLLIDAKPMWLALLDDLMRATPAPVIAARFHKGFTIAIVQMVKRALGSRL 738 Query: 688 -----GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQ 734 + T+ SGGV+ N L +L+ LA +L + +PA DGG++LGQ Sbjct: 739 HGSAPAVRTVALSGGVMQNAALFEQLSERLAACGLVVLAHRQVPANDGGIALGQ 792 >UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Photobacterium RepID=Q1ZUD0_PHOAS Length = 796 Score = 881 bits (2278), Expect = 0.0, Method: Composition-based stats. Identities = 274/801 (34%), Positives = 391/801 (48%), Gaps = 66/801 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M N + + I G VQGVGFRPFV+QLA Q L G V ND +GV++ ++ +T F Sbjct: 1 MTDNIARQY-IHITGIVQGVGFRPFVYQLATQHALVGSVINDSEGVKIDVQGSLDTLTIF 59 Query: 58 LVQLYQHCPPLARIDSVEREPFI---WSQLPTEFTIRQST-GGTMNTQIVPDAATCPACL 113 QL PPL+RID V + P F I QS + I PD C AC Sbjct: 60 TSQLIDQAPPLSRIDDVAIRTLSLWSELEKPNTFGIEQSQCRESTTVSISPDQGLCDACK 119 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 +++ P R ++Y F NCTHCGPR++II+A+PYDR T M F LCP C + Y++P+DRR Sbjct: 120 RDISNPDSRYFQYSFTNCTHCGPRYSIIKALPYDRAVTSMQDFLLCPDCAEAYQNPVDRR 179 Query: 174 FHAQPVACPECGPHLEWVSHGEH----------AEQEAALQAAIAQLKMGKIVAIKGIGG 223 +HAQP++C CGP + + A ++ A++ ++K G+IVA+KGIGG Sbjct: 180 YHAQPISCDCCGPWVTLYDAQQRVKSSAELPLVATKQTAIEQLAQKIKDGEIVAVKGIGG 239 Query: 224 FHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVL 277 FHLACDA N+ AVA+LR K+R +KPLA+M D DA + L A PIVL Sbjct: 240 FHLACDATNAQAVASLRKLKYRQSKPLAIMAASDDIAQQFVEGCDAEWKALAAQARPIVL 299 Query: 278 VDK----------KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQ-----CPLVMTS 322 ++K + L +++AP++ +G+MLP PL +LL EL+ LVMTS Sbjct: 300 MNKRLDIVAEEVTRTGGVLAENVAPNVPYLGIMLPYTPLHYLLFDELKAIGATSTLVMTS 359 Query: 323 GNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVP 379 NLSG P A Q G G L HNR IV DDS+V +G +LR +RGY P Sbjct: 360 ANLSGMPIATELAQVCTQFSGKISGILDHNRPIVSACDDSLVHYAGGKIRVLRMARGYAP 419 Query: 380 DALALPPGFKNVPPV-LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLM 438 + + ++ + L LGA+ K+T L +Q ++S ++GDL D +++++E + Sbjct: 420 VSHFVTGSKQSTGNITLALGAEQKSTIGLALPQQWLISPYIGDLDDLDTELRYQETFNHL 479 Query: 439 QNIYDFTPQYVVHDAHPGYVSSQWAREMNL------PTQTVLHHHAHAAACLAEHQWPLD 492 +Y+ PQ +V D HP Y SSQ+A + P V HHHAH A +AEH Sbjct: 480 TTLYNVKPQQLVCDKHPNYHSSQFAEKYQAKAHLITPLLKVQHHHAHVLAVMAEHNLT-- 537 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 V+ T DG G G++ +WGGE L + + +G L L GG+ A K+P R L A Sbjct: 538 -EQVLGFTFDGTGWGDDHTVWGGEVLLSTPQSYQRVGHLRQFRLIGGEKAIKEPARLLFA 596 Query: 553 QCLRFVP----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCA 608 L + S ++ L + G +P SS GR DA + LG Sbjct: 597 LLLECYSVDAIKAMQLSAFKEWSDVYFNNLYQLWLTGSQSPYTSSMGRLIDAWTSLLGLV 656 Query: 609 PATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ---QWLNWQAPVNQRA 665 + YEGE LE A + +D ++ L+ A + A Sbjct: 657 D-RVDYEGECGLKLEQAAMKDRCHQPISFAVDANGVIDWQPLFEYALPLLSLVADDYRPA 715 Query: 666 WA---FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARL--AHYLADFTLLFP 720 W H + A ++ +V GGV NR+L + +L Sbjct: 716 WRNCLAH-SFISAIADVIVTIGQTYKPLPIVLGGGVFQNRVLVDEVFEKASAHSLSLFCG 774 Query: 721 QSLPAGDGGLSLGQGVIAAAR 741 ++LPA D +S GQ A + Sbjct: 775 EALPANDASISAGQLWFAIHQ 795 >UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Rhizobiales RepID=Q20XQ9_RHOPB Length = 785 Score = 881 bits (2277), Expect = 0.0, Method: Composition-based stats. Identities = 338/763 (44%), Positives = 427/763 (55%), Gaps = 34/763 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 S G ++R+RG VQGVGFRPFV LAQ+L L G V ND +GV + + + E + + Sbjct: 13 SVGERIRVRGLVQGVGFRPFVHALAQRLALLGSVHNDSEGVLIHVAGERAAIEALVAAIS 72 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNTP 119 P LA + ++ER P+ F I S GG +VPDA C AC AE++TP Sbjct: 73 DEAPALAHVVTIERAPWSAPSGLVTFAIASSPAEHGGRNTAGVVPDARICAACAAEIDTP 132 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 GERRYRY F +CT CGPRF+II A+PYDRP T M F LC C EY P DRRFHAQP+ Sbjct: 133 GERRYRYAFASCTACGPRFSIIDAIPYDRPNTTMRDFALCAPCRSEYDSPADRRFHAQPI 192 Query: 180 ACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 ACP+CGP L + + L AA+ L+ GKI+A+KG+GGFHLACDA + AV Sbjct: 193 ACPDCGPQLWLENAAGARVAADDPLTAAVDALRQGKILALKGLGGFHLACDAGSEAAVDA 252 Query: 239 LRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LRARK RPAKP A+M + + LL +PAAPIVL+ ++ L +AP Sbjct: 253 LRARKRRPAKPFALMAADLEAIRRFCRADAQEAALLLSPAAPIVLLPWRHHEGLAAAVAP 312 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + + +G MLP PL HLLL E LVMTSGN+SG+P I N A L G AD FL+H+ Sbjct: 313 NQSLLGFMLPTTPLHHLLLNEFGGALVMTSGNVSGEPQVIDNADAQRKLGGFADCFLMHD 372 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I +R+DDSV R G +LR +RGY P LPPGF PPVL LG ++K CL R Sbjct: 373 RRIARRLDDSVARVVGGETRLLRHARGYAPAPRTLPPGFAAAPPVLALGGEMKGAICLTR 432 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----E 465 ++A+LS HLGDL + ++ A+ ++D P + D HP Y SS WA E Sbjct: 433 NDEALLSHHLGDLEEPLTYREFVRAIDDYAQLFDHRPSLLAADLHPAYRSSAWAEQAAAE 492 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 LP V HHHAH A+ +AE WP DGG V+ + LDGIG G +G +WGGE L +Y + Sbjct: 493 RALPLARVQHHHAHIASAMAERGWPRDGGRVVGIALDGIGYGSDGTVWGGEILLCDYMDF 552 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE------WQNYSETASVQQQNWSVLA 579 + L V LPGG A QPWRNLLAQ A + Q VL Sbjct: 553 TRMAHLKPVPLPGGARAVTQPWRNLLAQLDAAFGTEGTAACLPALPGGAILAAQQLGVLR 612 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-SCHGVTHPVTM 638 +A+ RGIN+P +SSCGR FDAVAAAL APA LS+EGEAA ALEALA+ S +P + Sbjct: 613 QAMARGINSPPSSSCGRLFDAVAAALALAPAQLSFEGEAAMALEALASGSADTRGYPFAL 672 Query: 639 PRV--DNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 +D A W+ L+ P+ A FH LA F + A + Sbjct: 673 DTATTPWSIDPAPMWRALLDDLAAGVPIAAIAARFHFGLADAFCDCALKIAKANDAQAIA 732 Query: 694 FSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 GGV N LL L + +L P +PA DGGL+ GQ Sbjct: 733 LGGGVFQNGLLLQACLARLSASSLPVLSPAQIPANDGGLAYGQ 775 >UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK99_THEYD Length = 830 Score = 880 bits (2274), Expect = 0.0, Method: Composition-based stats. Identities = 269/837 (32%), Positives = 394/837 (47%), Gaps = 109/837 (13%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHC 65 + + I+G VQGVGFRPFV+ LAQ LNL G V N GV + + + E F+ +L + Sbjct: 2 KRLHIEIKGVVQGVGFRPFVYNLAQHLNLKGFVTNTSKGVTIEIEGERVEEFISKLQNNP 61 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA+I S+++ + F I +S T T + D + C CL E+ TP +RRY Sbjct: 62 PPLAKIYSIKKTELSPNN-YKTFEIIESIDETGFTHVSEDVSICEDCLRELFTPTDRRYL 120 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR+TI +PYDRP T MA F +CP C EY+DP +RRFHAQP ACP CG Sbjct: 121 YPFINCTNCGPRYTITMKVPYDRPNTTMAVFKMCPECLSEYKDPSNRRFHAQPNACPVCG 180 Query: 186 PHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P + A E E + AI +K GKI+AI+G+GGFHL CDARN AV LR RK Sbjct: 181 PQVRLFVKEGSALNEIENPIPEAIRVIKEGKILAIRGLGGFHLCCDARNEEAVKELRKRK 240 Query: 244 HRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP A+M P + + D R++L + PIVL+ KK L + +A + Sbjct: 241 KRSNKPFALMSPSVEAIEKFCFVSDEERKILISLMRPIVLLRKKPQCNLPEALALKNAYL 300 Query: 298 GVMLPANPLQHLLL--------------------QELQCPLVMTSGNLS--GKPPAISNE 335 G MLP PL +LL +V N S + Sbjct: 301 GFMLPYTPLHYLLFYYPAKVGDSSSFSLLGMTEEGRRGFLVVNAPRNDSKTDTTQPYKDN 360 Query: 336 QALA----DLQGIADGFLI------------------------------HNRDIVQRMDD 361 AL LQ D ++ HNR+I R+DD Sbjct: 361 SALRTSDFSLQPHFDCLVMTSGNISEEPIITKNEEALEKLNNVADAFLIHNREIFMRVDD 420 Query: 362 SVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQH 418 SVVRE +RR+RG+VP A+ L + +P V+ GADLKNTF L++ + A++SQH Sbjct: 421 SVVRELEGKIYFIRRTRGFVPKAIPLT---EELPEVMGAGADLKNTFTLIKSDYAIMSQH 477 Query: 419 LGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN----LPTQTVL 474 +GD+ + + E L ++++Y P V HD HP Y S+ WA+E +P + Sbjct: 478 IGDMENLETIEFYEEVLNNLKSVYRTEPSAVGHDLHPMYFSTSWAKEYAEKKCIPAFALQ 537 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH+ H A+ +AE+ ++ + DG G G +G +WG E L ++ + L L + Sbjct: 538 HHYCHIASLMAEYGL----NELFGIAFDGTGYGTDGTIWGSEFLYCTVKDFQRLAYLKPI 593 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEW----QNYSETASVQQQNWSVLARAIERGINAPL 590 +LPGG+ A K+ R L+ E + V ++ + + +PL Sbjct: 594 SLPGGENAIKECSRIALSLIDDTFGEDMDLIKKLPLYKVVSEEKIRQILKIKRLFQFSPL 653 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT----HPV----TMPRVD 642 +S GR FD V++ +G ++E EAA ALE+L + +P ++ Sbjct: 654 SSGMGRLFDGVSSLIGVCHYN-THEAEAAVALESLIEQGTEFSERDCYPFELVNSLEGEA 712 Query: 643 NQLDLATFWQQWL--------------NWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 +D ++ + + ++ +W FH+ + + L G Sbjct: 713 LVIDYKPMIREIVKDFLKSEAKPIGHSERKRGISFISWKFHNTIVKIILELTEHFRAKFG 772 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWL 743 + SGGV N L L + L+ ++P+ D +SLGQ I R Sbjct: 773 FDAVGLSGGVFQNAYLIRETIKALKKLGIKPLYHVNVPSNDACISLGQAYIVGKRIK 829 >UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Clostridium thermocellum RepID=A3DJT3_CLOTH Length = 753 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 253/765 (33%), Positives = 370/765 (48%), Gaps = 40/765 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFL 58 K+ S ++ + G VQGVGFRPFV +A++ + G V N G VE+ L+ E FL Sbjct: 4 GKSKSITKRITVSGIVQGVGFRPFVHNIAKKHGIPGTVRNIGGLVEIILQSSEEKYNEFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 L + P + I ++E E + F I +S + I PD C +C E+ T Sbjct: 64 QDLKANAPVGSEITNIETEDIK-EREFDGFRIIESKDDEEISIIPPDLPVCESCERELFT 122 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 +RR+ PFI+C CG R+TII +PYDR T M F +CPAC +EY P +RRFHAQ Sbjct: 123 GTDRRFLNPFISCMSCGARYTIIEELPYDRHNTTMRDFDMCPACREEYTSPRNRRFHAQT 182 Query: 179 VACPECGPHLEWVS--HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 ++C +CGP+L + G ++ A AA ++ G I+A+KGIGG+H AC + V Sbjct: 183 ISCNDCGPYLIFNDLTGGSELTEKDAFHAAANIIESGGIIAVKGIGGYHFACSPFLEDTV 242 Query: 237 ATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR K R AKP A+M D + + +LL + A PIVL+ K + Sbjct: 243 LRLRELKGREAKPFAIMFESVDSIRKYCVVSEKEEELLKSKARPIVLLYLKNNS-MAPSA 301 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 G LP PL LL++ PL+MTS N+S KP + + L+ + +G L Sbjct: 302 CQGSIYCGAFLPYTPLHMLLVKRCG-PLIMTSANISDKPIIKDDSEMLSLKSPLLNGVLY 360 Query: 351 HNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 + R IV+ +DDS VV S +++RRSRGYVP + L K++ + G+DLK FCL Sbjct: 361 NKRRIVRSVDDSVAKVVANSPQLIRRSRGYVPYPVFLKNRKKDLQ-IFAAGSDLKAAFCL 419 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 + AV+SQ+ GDL + + +++ + R + ++ TP V D HP Y SS++A + Sbjct: 420 YKNGNAVMSQYFGDLEEKTVLERYKASFRDLCHLLKITPDIAVCDMHPNYHSSRFAENLG 479 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HHHAH A+ +AEH VI + DG G G +G +WGGE L E + Sbjct: 480 IPLTYVQHHHAHVASVMAEHHLK---EQVIGVAFDGTGYGTDGKIWGGEFLICEGAEFKR 536 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L + + GGD + + + L N V+ + ++ A++ IN Sbjct: 537 VAHLRYIPVLGGDSSMRDAAKTAACFLL-------NLGLDQYVKDERKDIIKAALKNNIN 589 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-------ASCHGVTHPVTMPR 640 SS GR FDAV++ L YEGE A LE A + + Sbjct: 590 TVPTSSMGRLFDAVSSLLEIQYENR-YEGECAAMLEKEAVLALRHKIEPKKLAFEIKRKS 648 Query: 641 VDNQLDLATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 ++D + L + A FH A+A + + I T+ SGGV Sbjct: 649 DLIEIDPKPMLKSMCHLQNKDDTGSLALGFHYAVADMILEVCEIIRAEQKINTVALSGGV 708 Query: 699 IHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 N LL R L D F + + S+P DG + LGQ I R Sbjct: 709 FQNTLLMERTLKILRDRHFNVYYNMSVPPNDGSIGLGQTFIGLVR 753 >UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y917_COPPD Length = 764 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 269/750 (35%), Positives = 380/750 (50%), Gaps = 40/750 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPP 67 RI G VQGVGFRPFV ++A+QLNL G V N G GV + ++ + + F +L P Sbjct: 6 FRINGIVQGVGFRPFVARIAKQLNLTGFVLNSGHGVYIEVQGEEHLVKVFEEKLNNEKPH 65 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 + + Q +F I S T + T I PD ATC C+ E+ TP RRY Y Sbjct: 66 ESIYIEFDTWECEEIQDEKDFVILASETNADVFTFIPPDLATCHDCVEEILTPSNRRYLY 125 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P NCT+CGPR+T+I +PYDRP T M FPLC C +EY +P DRR+HAQPVACP+CGP Sbjct: 126 PLTNCTNCGPRYTVIEKLPYDRPNTSMKPFPLCAECYREYTNPKDRRYHAQPVACPDCGP 185 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 VS + L+ + LK GK+VAIK +GG+ LACDA N AV LR K RP Sbjct: 186 QTYIVSKDGGMIADPDLRKTVDILKDGKVVAIKSLGGYLLACDALNETAVNRLRKLKRRP 245 Query: 247 AKPLAVM--LPVADG---LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 +P A+M LP + + A + LL +PAAPIVL+ KK L + +AP N +G ML Sbjct: 246 QEPFALMSTLPNIENFCYVNSAEKDLLESPAAPIVLLQKKPYGSLPEVVAPGQNYLGFML 305 Query: 302 PANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P +PL H++ LVMTS NL G+ L L +AD L H+R IV +D Sbjct: 306 PYSPLHHIIFYHWPEAVLVMTSANLHGEVIYYEESD-LPKLLEMADYVLTHDRAIVTHVD 364 Query: 361 DSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ + ++RRSRGYVP + L K P+L G D K T L + A+L Q Sbjct: 365 DSVVQMLSDGPHLIRRSRGYVPLPIKLSNQCK--VPILATGGDEKATPALAKNGYAILGQ 422 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHH 477 ++GDL + + + + ++ +++ PQ VV D HPGY+S ++A LP + HH Sbjct: 423 YVGDLKNVRTMDTYLKVIDHLKELFEIEPQVVVTDKHPGYLSHRFAYSTGLPVIELQHHV 482 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALP 537 AHA + + E+Q IA+ DG G G++G LWG E L V + + L + L Sbjct: 483 AHALSVMEENQL----SKAIAIVYDGTGYGDDGTLWGSEVLLVENADYQRLFHFDYMPLV 538 Query: 538 GGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 GG+ A ++PWR + + + +A +G PLA GR Sbjct: 539 GGEKAIEEPWRLAASLL--------QIDQAERFFGERGRNIALLGAKG-RFPLACGMGRI 589 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDNQLDLATFWQ---Q 653 FDAV+A LG +YEGE A L+ +A S + ++ + Q + Sbjct: 590 FDAVSALLGVCSMA-TYEGEPAQKLQMIAENSLEKGNFADNITIHESTVSTRDIIQNIVE 648 Query: 654 WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 LN +N + FH+ +A+ ++ + +V SGG N +L + L Sbjct: 649 LLNKGYEINDISRIFHNTVAELTVRMVIK----FDWENVVLSGGSFQNNILYKSVRDRLE 704 Query: 714 --DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + + +P D G++LGQ R Sbjct: 705 KLGLKVFRNRQVPMNDNGIALGQIAYVLRR 734 >UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Clostridium botulinum RepID=B2TM80_CLOBB Length = 783 Score = 879 bits (2271), Expect = 0.0, Method: Composition-based stats. Identities = 255/778 (32%), Positives = 406/778 (52%), Gaps = 59/778 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPP 67 + + G+VQGVGFRPFV+++A + N+ G V N +GV++ + E+ ++F++ L CP Sbjct: 7 ILVNGRVQGVGFRPFVYRIACKNNIKGYVKNTCNGVQIDVEGLEENIKSFIMDLDSKCPK 66 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNT-PGERRYR 125 + +I+ ++ + +F I +S T I PD A C C E+ ERRY Sbjct: 67 VCKINEIDINDIKYMNYYNDFQILESDNNYKGETLISPDIAICDECYKELFNISEERRYL 126 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y FINCT+CGPRFTII+ +PYDR T M F + C EY D L+RRFHA+P C CG Sbjct: 127 YSFINCTNCGPRFTIIKKLPYDRCNTTMKKFVMYNKCRSEYYDKLNRRFHAEPTCCVNCG 186 Query: 186 PHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 P L+ V G + + L+ LK G+I+A+KGIGGF+L CD +N +++ LR RK+ Sbjct: 187 PKLKLVDRFGRKIKCDDVLRITRQYLKEGRIIALKGIGGFNLICDGKNKSSIDVLRKRKN 246 Query: 245 RPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 RP KPLA+M+ D + + ++L PI+L++K+ L +I N++G Sbjct: 247 RPQKPLALMMRDIDVVNKYCFVNEKENEILQGSKKPIILLNKREN-NLPKNIVFKNNKLG 305 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 ++LP +PL LL LV TSGN++ P N++A +L IAD FLIH+R+I Sbjct: 306 IVLPYSPLHVLLFDNELEVLVFTSGNINQMPIEYKNDEAFNNLNDIADYFLIHDREINAS 365 Query: 359 MDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DDSVV+ ++R RGY P ++ + VL LG+ LKNT + G + Sbjct: 366 IDDSVVKVFMNKELVIRSGRGYAPISIR----SNSEEGVLALGSQLKNTLSISSGNNIFI 421 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE---------- 465 S ++GD+ + +++ L+L++++YD + +D HP Y ++ + + Sbjct: 422 SPYVGDMENLETIDRFKRNLKLIRSLYDIKINTICYDMHPNYFNNYFLEDNLNDMDIKES 481 Query: 466 -MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 M + HHHAH A+C+ ++ VI + DG G GE+ +WGGE L +Y++ Sbjct: 482 NMKFKKIGIYHHHAHIASCMFDNDIQ---EPVIGIAFDGTGYGEDKKIWGGEFLICDYKK 538 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---------WQNYSETASVQQQNW 575 + +G L + LPG D K PW+ ++ + ++NY+ +N+ Sbjct: 539 FKRVGCLKYMNLPGNDGGIKMPWKMGMSLLKGALKNNIVSKNLNIFKNYNLPDCFNLENY 598 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-------- 627 ++++ I+R IN SS GR FD VA+ LG ++YEGEAA LE +A+ Sbjct: 599 ELISKIIDRNINTSETSSMGRLFDGVASLLGFT-NNVTYEGEAAIYLENIASTYIINSVE 657 Query: 628 SCHGVTHPVTMPRVDNQ--LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMRE 682 S + +++ + D + +DL + L + + + FH+ + + L ++ Sbjct: 658 SVYKLSYSYNLKFNDEKYIIDLDEMILEILEDLKNEESLGLISIKFHNTITEFSIDLCKK 717 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 I + SGGV N +L L L DF +L +P D G+SLGQ +IA Sbjct: 718 LRKQYNINKVALSGGVFQNDILLKNLYLKLEENDFNVLIHGEIPCNDSGISLGQLIIA 775 >UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH Length = 796 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 345/778 (44%), Positives = 432/778 (55%), Gaps = 46/778 (5%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLAR 70 RG VQGVGFRP VW+LA L G V ND DGV++R D + F+ +L CPPLAR Sbjct: 2 RGMVQGVGFRPTVWRLAHDCGLSGSVRNDSDGVQIRAWGDAVALDRFIARLRDECPPLAR 61 Query: 71 IDSVEREPFI---WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 ID++ER F I S GG + T +VPDA C AC+A++ P RRYRYP Sbjct: 62 IDAIERRVLAQDAEGADLGGFRIVASVGGPVRTGVVPDAVVCSACIADIGDPLNRRYRYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F NCTHCGPR +I+RA+PYDR T MAAFP+CPAC EY DP DRRFHAQP+AC CGPH Sbjct: 122 FANCTHCGPRLSIVRAIPYDRANTAMAAFPMCPACLAEYEDPADRRFHAQPLACAACGPH 181 Query: 188 LEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + G A + A++AA A L+ G IVAIKGIGGF LACDA N AVA LR RK R Sbjct: 182 VWLEHTGGPLAAGPDDAIRAAWALLRDGGIVAIKGIGGFQLACDACNPVAVARLRQRKRR 241 Query: 246 PAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYV---PELCDDIAPDLNE 296 KP A+M + A LL +PAAPIV+V + L D+AP + Sbjct: 242 ERKPFALMARDLAVIRQYSEPTAAECGLLQSPAAPIVIVQTRSDRQGAPLAPDVAPGIAA 301 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G MLP PL LL+ P+V+TSGN S +P N A L IAD FL+H+RD+V Sbjct: 302 LGFMLPGTPLHWLLMAMADRPIVLTSGNASDEPQCTENADARMRLGAIADAFLMHDRDVV 361 Query: 357 QRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 +R+DDSV R + ++RRSRGY P L LPPGF PVL +G +LKNTFCL+R +A Sbjct: 362 RRVDDSVARVVLDVPRVMRRSRGYAPAPLPLPPGFAAAAPVLAMGGELKNTFCLMRAGEA 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLP 469 +LS H+GDL D +R AL +++ P V D HP Y+S + AR+ LP Sbjct: 422 ILSHHMGDLEDALTHADYRRALTQYMALFEHGPHLVAVDMHPEYLSGKIGRDLARQGQLP 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAH AAC+AE++ L G V+ + LDGIG G +G+LWGGE L +YR+ L Sbjct: 482 VAQVQHHHAHIAACMAENRVALAAGPVLGVALDGIGYGVDGSLWGGEFLLADYRDFTRLA 541 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAIE 583 V +PGG+ A QPWRN A V + + + + VL + Sbjct: 542 CFKPVGMPGGERAIHQPWRNTYAHLAAAVGWDTLIARHASLALVRFLATRPREVLDAMLT 601 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS------CHGVTHPVT 637 R IN+PLASS GR FDAVAAA G P YEG+AA EALA G +P Sbjct: 602 RSINSPLASSAGRLFDAVAAAAGVCPERACYEGQAAMEFEALADRRTLSEEDDGRAYPFA 661 Query: 638 M-PRVDNQLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATMRGIT--- 690 + P L+ W L A P + FH LA A+++ A G Sbjct: 662 IVPGTPACLEPGPMWVALLADLARATPAPLISARFHKGLAIAIASMVAYLADCPGAGCRA 721 Query: 691 -TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + SGGV NR+L ++A L +L +PA DGGLS GQ IAAAR L G Sbjct: 722 VPVALSGGVFQNRILLEQVATRLSAQGRRVLTHSQVPANDGGLSFGQAAIAAARSLGG 779 >UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK63_9FIRM Length = 782 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 266/781 (34%), Positives = 386/781 (49%), Gaps = 56/781 (7%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + ++I G VQGVGFRPFV +LA + G VCN G VEV + + F+ + + Sbjct: 2 KRLNIKIYGIVQGVGFRPFVSRLADACQIRGTVCNKGPYVEVFAEGNDAALQQFVEGIPK 61 Query: 64 HCPPLARIDSVEREPFIWSQLP-TEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 P A I V+ + P +F I +S + + PD ATC C AE+ P +R Sbjct: 62 KAPERAAILKVDVHEVTDAAPPYADFAIIESAKERGDIFVSPDIATCDKCRAELFDPKDR 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY +PFINCT CGPR TI+ +MPYDR T M FP+C AC KEY P RR+ AQPV C Sbjct: 122 RYLHPFINCTACGPRLTILESMPYDRERTSMKEFPMCAACHKEYVSPESRRYDAQPVCCN 181 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + + H E A++A L G I AIKGIGGFHLACDA + AV LR Sbjct: 182 ACGPQVYLLGH-EDVRGADAIRAVRRVLASGGIAAIKGIGGFHLACDATDEAAVHRLRTL 240 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 KHRP KP AVM+ + L +++T PI+L+ ++ L +AP + Sbjct: 241 KHRPQKPFAVMMRDEETARRACHLEPGEAEMMTGHQKPILLLRRREDSPLAPSVAPGNPK 300 Query: 297 VGVMLPANPLQHLLLQ--------ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 VGVMLP P+Q L+ E+ LVMTSGN SG P ++E+A L + D Sbjct: 301 VGVMLPYAPVQMLIFDYPEDHETPEVPAMLVMTSGNPSGAPICHNDEEAEETLAPLCDVI 360 Query: 349 LIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L H+R I R DDSV+ M+RRSRG+ P L + VL +G +LKNTF Sbjct: 361 LSHDRRIRLRADDSVMDWFAGRPYMVRRSRGFAPLPFMLSAPLQGQ--VLGIGGELKNTF 418 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----Q 461 CL S ++GD+SD + +++++LM+++ + P+ + D HP Y +S Sbjct: 419 CLASSHLFYPSPYIGDMSDLRTVLALKDSVQLMESLLENRPEAIACDLHPRYNTSAVAEA 478 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 A+E +P V HH+AH +C+AE+ VI ++ DG G G + +WGGE L + Sbjct: 479 LAKEAGVPLFKVQHHYAHILSCMAEND---QQAPVIGVSFDGTGYGTDSTIWGGEFLLAD 535 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE--------------WQNYSET 567 Y+ LG + + GGD ++++ WR ++ + + Sbjct: 536 YKGFRRLGSIEPFSQAGGDKSSREGWRIAVSLLRDTLVRTMAGRSAAEVDAVWKEQCLAL 595 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 ++ ++ + + + +N ++S GR FD V+A LG + ++EGEA+ AL+ A Sbjct: 596 GLCDEKEFAAQSFMLRQHVNCIESTSAGRLFDGVSALLGLRRES-TFEGEASMALQFAAE 654 Query: 628 SCHGVTHPVTMPRVDNQ-----LDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAAL 679 S G + +P + L + + A+ FH ALA+ A Sbjct: 655 SAEGTDGSLDLPLHEAADGRFLLPTTALFGALYARHQQGRAAEELAYRFHQALAEMIVAG 714 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 G++T+ SGGV N LL + L A F L LP DGG+ +GQ Sbjct: 715 CERARRETGLSTVALSGGVFQNLLLTRLVKDSLEAAGFQPLLHSLLPPNDGGICVGQAAF 774 Query: 738 A 738 A Sbjct: 775 A 775 >UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 Tax=Shewanella RepID=Q0HUQ7_SHESR Length = 840 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 278/817 (34%), Positives = 391/817 (47%), Gaps = 94/817 (11%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 QL I G VQGVGFRPFV++ A +L L G V N+ +GV + L+ ++F+ +L + Sbjct: 28 RRQLHITGIVQGVGFRPFVYRWASELKLTGTVLNNANGVMIELQGPTAHLDSFVRELTTN 87 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-------------TMNTQIVPDAATCPA 111 PPLARID + + P + T F I QS + D + C Sbjct: 88 PPPLARIDQMTQSPLAVNLEETSFDIIQSDSQSDDQSDESGEHHLAALVAVSADKSICQD 147 Query: 112 CLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD 171 CL++M+ P +R Y Y F NCT+CGPR+TII A+PYDR T MA F +CP C K Y+DPL+ Sbjct: 148 CLSDMHNPQDRHYGYAFTNCTNCGPRYTIINALPYDRHHTAMADFAMCPDCAKAYQDPLN 207 Query: 172 RRFHAQPVACPECGPHLEWVSHGEHA-----------EQEAALQAAIAQLKMGKIVAIKG 220 RR+HAQPV+CP+CGP L S A L AA +L G+I+AIKG Sbjct: 208 RRYHAQPVSCPKCGPQLSLKSPQGELLAPNSLSALQDNSLAVLSAAAEKLAQGQILAIKG 267 Query: 221 IGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAP 274 +GGFHL CDA N+ AV LR RK R AKPLAVM+P + A Q L++ P Sbjct: 268 LGGFHLMCDATNTLAVNQLRQRKQRKAKPLAVMMPSIEVAKRYVTGTQAEWQTLSSQERP 327 Query: 275 IVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN 334 IVL+ L IAP++ ++G+ LP PL HLLL + PLV TS N+SG+P Sbjct: 328 IVLMQALDKHNLSHQIAPNIPKLGIFLPYTPLHHLLLGQFNGPLVATSANVSGEPIITDC 387 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVR---------ESGEMLRRSRGYVPDALALP 385 ++ ++ L + D + HNR I+ DDSVV+ ++LR +RGY P + LP Sbjct: 388 DELISQLGHVVDAIVDHNRPILNGCDDSVVQLIQPPNGCAPQVQVLRLARGYAPLSFPLP 447 Query: 386 PGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFT 445 + +L +GA KN L G LS H+GDL + + L +Y F Sbjct: 448 KPLSH--SILAVGAQQKNAIALGFGSNVFLSPHIGDLFSVSAEQYFERTLATFARLYHFN 505 Query: 446 PQYVVHDAHPGYVSSQWAREMN-------------LPTQTVLHHHAHAAACLAEHQWPLD 492 P+ +VHD HP Y S+WA + T +V HHHAH + +A +Q+ Sbjct: 506 PELIVHDKHPDYAPSRWAETQQQHSLDTQSQDTRPIQTLSVQHHHAHVLSVMAINQYQ-- 563 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 V+ + DG G+G +G+LWGGE L E L A+ L GG+ A KQP R LLA Sbjct: 564 -EPVLGFSFDGTGLGNDGSLWGGEVLLTTLNGAERLAHFEAIPLLGGEQAIKQPVRLLLA 622 Query: 553 QCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCA 608 + + + + S L R + G + +SS GR FDA+A ALG Sbjct: 623 LLFQQMSLEEVQTLTLPILTILSPITLSNLHRIWQNG-HGINSSSVGRLFDALACALGFI 681 Query: 609 PATLSYEGEAACALEALAASCHGVTHP---VTMPRVDNQLDLAT------------FWQQ 653 T +EG+A +EA A P + +P + + + ++Q Sbjct: 682 DTTQ-FEGQAGMLIEAAARRADAKQLPTLMLDLPLEISDMPSDSSMHEPHIWRSSQLFKQ 740 Query: 654 WLNWQAPVN-------QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 + Q A AF ++ A + GGV N+ L Sbjct: 741 IITLITEAPLTDVLQAQIARAFLHSVGDAICG----YAARYPTLPVALCGGVFQNQYLLE 796 Query: 707 RLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + L T+L + +P DGG++LGQ + Sbjct: 797 YCLNKLHQQGNTVLPNKHIPVNDGGIALGQLWYGIHQ 833 >UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Veillonella RepID=D1BLR7_VEIPT Length = 759 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 260/762 (34%), Positives = 375/762 (49%), Gaps = 35/762 (4%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 + T+ +R G VQGVGFRP V A L L G V ND GV V ++ + FL Sbjct: 5 SNQTTERWGIRYTGIVQGVGFRPLVSMCAHSLGLTGFVYNDSRGVYVEIQGPLGALQLFL 64 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMN 117 + P L RI S + +F + S G +++T I D A C C+ E+ Sbjct: 65 DAVQAEQPRLCRITSQTVQHLTVKGDEIDFIVAPSPLGESVSTFISADTAPCDDCIKELQ 124 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 +RR YPFINCT+CGPR+TII+++PYDR T M FP+C C EY D RR+ A+ Sbjct: 125 -QDKRRRDYPFINCTNCGPRYTIIKSLPYDRERTTMNEFPMCEDCKAEYEDIEGRRYRAE 183 Query: 178 PVACPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 P AC CGP A + G I+AIKG+GG+HL CDARN AV Sbjct: 184 PNACSRCGPQYTLYKPDRKAVDTVNIWNTTRELINEGSIIAIKGVGGYHLVCDARNDAAV 243 Query: 237 ATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE--LCD 288 LR RK+RP KPLA+M+ D + D +LT PIVL++K + L Sbjct: 244 QRLRKRKNRPHKPLAIMVGTLDMAIELVHINDVELDILTGMERPIVLLEKNHNSSVHLSS 303 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +APD +GVMLP +P+ +LL +MTSGN SG +++QA +L +AD F Sbjct: 304 YVAPDNRMLGVMLPYSPMHEVLL-PFDAAWIMTSGNKSGDSVLYNDDQAFNELGEVADYF 362 Query: 349 LIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L+HNR+I +DDSVV +RRSRGYVP+ + + +L +G+DLKN F Sbjct: 363 LVHNREIYAPLDDSVVVVINNKPRFIRRSRGYVPEPIHCDGLEQT--SILAMGSDLKNAF 420 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE 465 + +G + ++ H+GDL + ++ ++++ P ++ D+HP + SS+ + Sbjct: 421 AMNKGSEVLVGPHIGDLENISTHETLEWTIKRYKSLFSVQPDKIIIDSHPQFFSSRLGEK 480 Query: 466 MN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 + L V HHHAH A+ +AEH G V+ + +DG G G +G +WGGE L Sbjct: 481 IGESFHLSVVPVQHHHAHIASVMAEHNLR---GLVLGIAMDGTGYGPDGTIWGGEFLLCK 537 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN--YSETASVQQQNWSVLA 579 + + L + A LPGG+ A +PWR L + + Y E + W +L Sbjct: 538 GNQYQRLAHIHAAPLPGGEKAVSEPWRQALWYIRNYYGDDIPFVYQEWMKELPKGWEILD 597 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 +A++ + A+SCGR FD V A LG SY+ + A ALE L G +T Sbjct: 598 KALQSRMPMIQATSCGRLFDTVGALLGLGMVH-SYDAQIAIALETLCGDEKGSL--LTYH 654 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQR---AWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + LD Q ++ R A +FH +A + I+ SG Sbjct: 655 YDGHILDFTPTVQSIMDGVVRGECRAHLAASFHKTIAIALCETAADLMERYNISDAAMSG 714 Query: 697 GVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 GV NR L + L +++P+ DGGL+LGQ + Sbjct: 715 GVFQNRKLLEFIYRTWHIGNLYMNEAVPSNDGGLALGQLWLG 756 >UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5I7_9EURY Length = 725 Score = 875 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 271/744 (36%), Positives = 403/744 (54%), Gaps = 49/744 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHCPPL 68 ++R+ G VQGVGFRPF++ LA+ NL G V N G VE+ + D E+F+ + + P L Sbjct: 3 RIRVEGIVQGVGFRPFIYNLAKSYNLKGYVKNCGTYVEIVVSGDNIESFIKDIERKKPEL 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 A+I+ + E F ++ ++F I +S G N+ I PD A C CL EM +RRYRYPF Sbjct: 63 AKINKIVVEDFEGNE-FSDFYILESDGFGGNSAIPPDIAICNLCLKEMFDKKDRRYRYPF 121 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+C +CGPRFTI +P+DR T M FPLC C KEY DP DRRFHAQ CP+CGP + Sbjct: 122 ISCINCGPRFTITEKLPFDRENTSMKDFPLCEECLKEYEDPRDRRFHAQTTCCPKCGPRV 181 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 E + A++ AI L+ GKI+AIKGIGG+HL C A V LR +RP++ Sbjct: 182 FLNDK----EGDEAIKEAIKLLEKGKILAIKGIGGYHLFCRADRDEPVLRLREILNRPSQ 237 Query: 249 PLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P AVM + L LLT+ PIV++ K L + ++ +L+ VGVMLP Sbjct: 238 PFAVMSLIEEVKKFAILSKEEEILLTSRERPIVVLKKSKDYYLSEYVS-NLDTVGVMLPY 296 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 L +LL ++ V TS NL G P AI + + L+ DG+L+HNR I+ R DDSV Sbjct: 297 TGLHYLLFNKVP-AYVATSANLPGLPMAIDEGE-IVKLK--VDGYLMHNRRIINRCDDSV 352 Query: 364 VR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 V+ LRRSRGYVP+ + + KN LC+GA+L +T CLV+G + LSQH+G Sbjct: 353 VKYIAGRAIFLRRSRGYVPEPIEV--EIKNDFTFLCVGAELNSTVCLVKGNKFYLSQHIG 410 Query: 421 DLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAREM----NLPTQTVLH 475 + S + +EA++ + + + ++V D HP Y S++ A E+ N+P V H Sbjct: 411 NTSKYETFLFLKEAIKRLMELTNTDKIDFIVSDLHPLYNSTKLAEELSEKFNVPLIKVQH 470 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AH + L ++ + + I L LDG+G G +G +WGGE L+ + + + +G L Sbjct: 471 HFAHGYSLLGDNNY---FDECIILALDGLGYGLDGKIWGGEILKFDSGKFKRVGHLEEQY 527 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 PGGDLA K P+R LL+ + + + + + +L I++ IN+P+ +S G Sbjct: 528 QPGGDLAVKYPFRMLLSILYKAIGD------EVFEKFEVNKILEMQIKKRINSPITTSTG 581 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWL 655 R DA+++ L +YEGE A LE A + P +N L ++ Sbjct: 582 RVLDAISSLLDICQEK-TYEGEPAIRLEGRAKEFNIEVEP---KIKNNILLTTPLVEECY 637 Query: 656 N---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 N + P+ + A+ LA G + ++ + T+ +GGV +N+++ R+ Sbjct: 638 NMLINKEPIEKIAYYSLIYLADGLFEIAKKFS-----DTIGITGGVSYNKIIVERIKERC 692 Query: 713 AD--FTLLFPQSLPAGDGGLSLGQ 734 + L+ +P GDGG+S GQ Sbjct: 693 EEEKIKFLYHSRVPNGDGGISFGQ 716 >UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKV0_AKKM8 Length = 775 Score = 875 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 281/781 (35%), Positives = 376/781 (48%), Gaps = 51/781 (6%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLV 59 + + ++ I G VQGVGFRP V++LA + L G V N GVE+ + +P E F Sbjct: 7 EQAAAALKFEIAGMVQGVGFRPHVYRLAVRHGLKGFVRNTESGVEIHVEGEPGAPERFWT 66 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQI-VPDAATCPACLAEMNT 118 L P AR+ VER + EF I +S + +PD A CP CL EM+ Sbjct: 67 ALMDGLPEHARVYGVERTVCEPAGFE-EFRIEESDSTPGGVPVMLPDLAPCPECLEEMHD 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P RRY YPF NCTHCGPR++II MPYDR T M F +CP C +EY+D DRRFHAQP Sbjct: 126 PSSRRYHYPFTNCTHCGPRYSIIETMPYDRARTSMKGFRMCPECRREYQDVEDRRFHAQP 185 Query: 179 VACPECGPHLEWVSHGEHAEQ-----EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 + CP CGP ++ + + L G IVA+ G+GGF L DA + Sbjct: 186 IGCPSCGPSVKVLFSDGSELGFGHGFDTPAAQVAWVLADGLIVALLGVGGFQLLADASSE 245 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 AV LR K R AKP AVM+P L + R+LLT+PAAPIVL +L Sbjct: 246 AAVRRLRRLKERDAKPFAVMVPDVAAAERLCRLSEEERRLLTSPAAPIVLARGGKDVDLA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 + VG+MLP++PL LL+ PLV+TSGNLSG+P +S E+ L L +AD Sbjct: 306 PSVCMFSRFVGIMLPSSPLHALLMDVWGKPLVVTSGNLSGEPLCVSVEEGLEKLGHVADV 365 Query: 348 FLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 FL+H+R +V+ +DDSVVR + M+RR+RGY P + P +L LGA LKNT Sbjct: 366 FLVHDRPVVRPVDDSVVRVTDGRAMMVRRARGYAPRPVWRTSA--AAPDMLALGAGLKNT 423 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG----YVSS 460 C ++ AV+SQHLGDLS + + + D PQ + DAHP + Sbjct: 424 ICWLKRGVAVMSQHLGDLSSAASLNAFERTVEALGRTLDAVPQVIAVDAHPDGPTFALGR 483 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 + AR+ N V HH AH AC E++ P + + DG G G +G +WGGE + Sbjct: 484 RLARKWNATVVPVQHHQAHVLACAVENETPF---PALGIAWDGTGFGTDGTVWGGEFFVL 540 Query: 521 NYRE-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ----QNW 575 + L LPGGD A ++P R + + P W+ Y +++ + Sbjct: 541 EEEGEPRRVARLRPFLLPGGDEAVREPSRCACSLARQMGP-WRTYGLDKRLERGMPVRKR 599 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 VL + R I+ P +SS GR FDAVA G EG AA LE+ AA G P Sbjct: 600 EVLEAMMARNIHCPSSSSMGRLFDAVAFWCGF-DGAAGCEGHAAMMLESWAAEASGEKMP 658 Query: 636 VTMPRVDN-------QLDLATFWQ---QWLNWQAPVNQRAWAFHDALAQGFAALMREQAT 685 +LD + + L A FH++L + Sbjct: 659 GDAYEWVMHEEGGLLELDWRPLMKSVDEDLLEGVSRGCIARKFHESLVNLVFDVAERFC- 717 Query: 686 MRGITTLVFSGGVIHNRLLRARLA--HYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + LV GG N L LA L PQ +P DGG+SLGQ +W Sbjct: 718 ---LDRLVLGGGCFQNAFLLEGLAGMAQSRRCQLSLPQRVPCNDGGISLGQVAAVVRQWK 774 Query: 744 A 744 Sbjct: 775 G 775 >UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHS1_9SPHI Length = 778 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 298/763 (39%), Positives = 390/763 (51%), Gaps = 46/763 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHC 65 L + G+VQGVGFRPFVWQLA+ + L G V N DGV + + D +T ++ Sbjct: 3 FHLHLTGQVQGVGFRPFVWQLARSMKLKGTVSNGADGVHIYVNADLQTVRVLTRRIRAEA 62 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRY 124 P LARI SV+ +FTI +S G + + PD A C AC AE++ P RR+ Sbjct: 63 PALARIQSVKLAEVEP-IDFGDFTIVESQAVGQASLLLTPDLALCDACRAEISDPANRRF 121 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 Y F CTHCGPR++I+R +PYDRP T MA F +C C++EY DP +RRF+AQ +CP C Sbjct: 122 GYAFTTCTHCGPRYSILRRLPYDRPTTTMAPFGMCADCEREYHDPSNRRFYAQTNSCPNC 181 Query: 185 GPHLEWVSHGE---HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 L +Q +Q +I L G+ +A+KGIGGF L CDA N++A+ LR Sbjct: 182 LVELSLFLASGQCITRDQSNIIQQSIDVLASGRTIAVKGIGGFLLLCDATNADAIHQLRE 241 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPE---LCDDIAP 292 RKHRP KPLAV+ P D L D R LLT+PA+PIV +DK+ + D IAP Sbjct: 242 RKHRPTKPLAVLYPNIDQLQQDCFLADDERALLTSPASPIVALDKRPELPSGLVADQIAP 301 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 LN++GVMLP PL LL PLV TSGN SG P +NEQAL L +AD + HN Sbjct: 302 GLNQLGVMLPYTPLLALLADAFGKPLVATSGNRSGSPICYTNEQALDQLSAVADLIVTHN 361 Query: 353 RDIVQRMDDSVVRESGEM-----LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 RDIV DDSVVR S LRRSRG P + N VL LGA LK+TF Sbjct: 362 RDIVVPQDDSVVRLSPVFRQPIILRRSRGLAPTVMMTDIPHSNA-NVLALGASLKSTFAW 420 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM- 466 +SQ+LGDL Q +R L ++D P V+ D H GY S+Q A E+ Sbjct: 421 QLRGNTYVSQYLGDLESYDTQTSFRATLDHFLTLFDAKPDAVLADQHEGYFSTQLAHELA 480 Query: 467 ---NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 +P ++ HH AH AA LAE++ V+ + DG G G +G +WGGE ++ + Sbjct: 481 NIWGIPLVSIQHHEAHLAAVLAENKLMEQAEPVLGVIWDGTGYGTDGQIWGGEFIKYQHG 540 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIE 583 E +G GD ++P + L+ + ++ W++ + Sbjct: 541 GFERVGHFAYFDALLGDKMPREPRLSALSLAFNIPGADELL--RPKFTEKEWNLYTKVGV 598 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV------THPVT 637 + N SS GR FDAVAA LG A +SYEGEAA LE+ AA V H + Sbjct: 599 Q--NKLKTSSVGRLFDAVAALLGLADK-VSYEGEAALLLESCAARYVRVNGYTTSQHYLP 655 Query: 638 MPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 + Q+ L PV Q A FH L Q AA+ R+ G+ L F Sbjct: 656 ETLLKAQVPTQAIVAGVVNDLQAGLPVGQIAATFHYTLVQAVAAVARQM----GVQQLAF 711 Query: 695 SGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQGV 736 SGGV N LL L + L + L F Q L D +S GQ Sbjct: 712 SGGVFQNALLVDWLRYELEPAYQLHFHQQLSPNDECISFGQIA 754 >UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM Length = 860 Score = 873 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 307/854 (35%), Positives = 405/854 (47%), Gaps = 122/854 (14%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 + + G+VQGVGFRPFV+++A L G V N GV + ++ + F L Sbjct: 14 VRRKFTVSGQVQGVGFRPFVYRIAADHALTGTVSNTAAGVFIEVQGPAASVDGFGHDLTH 73 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM--NTQIVPDAATCPACLAEMNTPGE 121 PPLAR+ S + ++ F I S G I D ATC CLA+M+ P Sbjct: 74 KLPPLARVVSCTHQDIPVAEGEDGFRIVASGDGGAGHEVLISADVATCDDCLADMSDPAN 133 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPF NCT+CGPR+TI R +PYDR T MA FPLCPAC EY +PLDRRFHAQP AC Sbjct: 134 RRHLYPFTNCTNCGPRYTITRFIPYDRDKTSMACFPLCPACAAEYENPLDRRFHAQPNAC 193 Query: 182 PECGPHLEWVSHG--------------------------------EHAEQEAALQAAIAQ 209 P CGP + +V A+QA Sbjct: 194 PVCGPRVWYVDGAPDGPAADTGYDAAPGSGRGDEPGCAPASDHGAGRPTGTPAIQALAEA 253 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDA 263 L G+I A+KG+GGFHLACDA + AV LR RKHRP KPLA+M+P + Sbjct: 254 LAAGRIAAVKGLGGFHLACDAASDAAVGELRRRKHRPHKPLAIMVPDLAAARRIVHVSPE 313 Query: 264 ARQLLTTPAAPIVLVDKKY---------------VPELCDDIAP---------------- 292 LL PIVL P + D AP Sbjct: 314 EEALLAGRERPIVLCRALDGLAGGMHGVARPGDGSPLVLDPDAPRTPPPISPLISPLISP 373 Query: 293 DLNEVGVMLPANPLQHLLLQELQC--------PLVMTSGNLSGKPPAISNEQALADLQGI 344 D VGVMLP PL H+LL+ LVMTSGN G+P + N +AL L I Sbjct: 374 DTPFVGVMLPYTPLHHVLLRLYGALLPEDRVPALVMTSGNAGGEPICLGNREALRRLSSI 433 Query: 345 ADGFLIHNRDIVQRMDDSVVRE-----SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 AD FL+H+RDI+ R DDSV R + + LRR+RG+ P + L + P VL +G Sbjct: 434 ADVFLLHDRDILIRTDDSVTRVNPATGAPQFLRRARGFTPRPVFLEG---DGPCVLAMGP 490 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 +LKNT C+ RG++A +SQH+GD+ + RE + I TPQ VV D HP Y++ Sbjct: 491 ELKNTLCVTRGDKAFVSQHIGDMHNLETLGFHREIAAHLPRILQVTPQAVVRDLHPDYMT 550 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 + A + LP T+ HH AH A LAE++ G + L LDG G G++G +WGGE L Sbjct: 551 TAEAEQSGLPVLTLQHHFAHIHAVLAENRHD---GPALGLALDGTGHGDDGTVWGGELLY 607 Query: 520 VNYREC--EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQ 572 V+ + LG L + LPGG+ A ++PWR + Sbjct: 608 VDNVALDHQRLGRLARIPLPGGEAAIREPWRIAQGLLWHLGLHEPVTDGARPWPWLRDHA 667 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA------ 626 Q ++L R +ERG+N PL SSCGR FDAV+A LG T++YEG+AA LE Sbjct: 668 QAAALLPRLLERGVNTPLTSSCGRLFDAVSALLGLC-TTVTYEGQAAIRLEHAQDAVSPC 726 Query: 627 ----ASCHGVTHPVTMPRVDN-----QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQ 674 + +P + + LD ++ + P + A FH + Sbjct: 727 GGSHDAFFTHAYPCPLRGARDGSDTLVLDTHALFRAVHDDWARGTPPGEVARRFHAGVVA 786 Query: 675 GFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSL 732 G A + A + + + SGG + N L L LA T+L LP GDG +SL Sbjct: 787 GLADMAAAVAGVMDVPVVALSGGAMQNLTLSVHLPQALAARGLTVLTHAELPPGDGCISL 846 Query: 733 GQGVIAAARWLAGE 746 GQ A R LAG Sbjct: 847 GQAAWA-RRELAGR 859 >UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q1NVR2_9DELT Length = 820 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 304/814 (37%), Positives = 391/814 (48%), Gaps = 84/814 (10%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCP 66 + RI G VQGVGFRPFV++LA++ L G V ND GV + Sbjct: 15 ARRRWRIGGVVQGVGFRPFVYRLAREHALAGRVYNDAAGVVIEAEGPAAALAAFGAALPA 74 Query: 67 PLARI----DSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGE 121 D V E Q + F I S G + PD ATC C E+ P + Sbjct: 75 QAPPAAVLADLVSEEMAP--QGGSAFRIEVSRQAGVPLAGVAPDLATCADCRRELFDPAD 132 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPFINCT+CGPR+TII +PYDRP T M F +CPAC EY +P +RRFHAQP AC Sbjct: 133 RRYLYPFINCTNCGPRYTIIEKIPYDRPHTSMGRFTMCPACQAEYDEPANRRFHAQPNAC 192 Query: 182 PECGPHLEWVSHGEHAEQE--------------------AALQAAIAQLKMGKIVAIKGI 221 P CGPHL+ + + AA L+ GKIVAIKGI Sbjct: 193 PHCGPHLQLLLAQKMGTDLFFEPAALSTTDGVASKNKSVPIFAAARQLLRQGKIVAIKGI 252 Query: 222 GGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPI 275 GGFHLA DA N AVA LR RK R KPLA+M+ L + A + L +PA PI Sbjct: 253 GGFHLAVDAANQEAVANLRRRKGRQHKPLALMVGDLATARRLVQLDERAERELCSPARPI 312 Query: 276 VLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE 335 +L ++ L +AP GVML PL HLLL + LVMTS N +P I + Sbjct: 313 LLALQQPEHGLAPAVAPGHGRFGVMLAYTPLHHLLLTDQLPVLVMTSANPGSEPLCIDDR 372 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSVVRES----------------GEMLRRSRGYVP 379 +A+ L GIAD + H+R IV+ DDSV+ S +RR RG+ P Sbjct: 373 EAIDRLAGIADAIVGHDRPIVRSNDDSVLFFSQPPAVDATAPLEPVAAPVFIRRGRGFAP 432 Query: 380 DALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQ 439 L L P +L +GA+LKNT CL ++AVLSQHLGDL + ++ + + Sbjct: 433 QVLPLAG---EGPALLGVGAELKNTVCLATADKAVLSQHLGDLQNLATYELFKRTIGDLA 489 Query: 440 NIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGD 495 ++ +PQ V D HP Y+SS+ WARE LP V HHHAH AACLAEH P G Sbjct: 490 SLLAISPQAVACDLHPDYLSSRWARQWAREHRLPLLPVPHHHAHLAACLAEHHHP---GP 546 Query: 496 VIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL 555 I L LDG G G +G +WGGE L + G L + LPGGD A +PWR LA Sbjct: 547 AIGLILDGTGYGPDGTIWGGEILLGDVAASTRFGHLETMPLPGGDAAVAEPWRTGLAYLQ 606 Query: 556 RF----VPEWQNYSETASVQQ-------------QNWSVLARAIERGINAPLASSCGRFF 598 + +P+ +E+ Q ++ + + IN PL SSCGR F Sbjct: 607 QAFADKIPDLPFLNESGENGDTIPVFQTGIPTYCQRQQMVLAMLAKKINCPLTSSCGRLF 666 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR--VDNQLDLATFWQQWLN 656 DAVAA G + YE +AA L LA + L + + Sbjct: 667 DAVAAICGVC-HRIDYEAQAAIELMELAGGLASPAFSYQIESRPAGIVLAIRPLVRDIAQ 725 Query: 657 WQA---PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 A V + FH L + F+A +R A G T+ +GGV+ N +L L L Sbjct: 726 AMAAGGDVATISRRFHYTLVELFSAGVRRAAAASGHQTVALAGGVMQNMVLLQGLRQSLQ 785 Query: 714 --DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 T+L PQ LP DG ++ GQ +A R +G Sbjct: 786 ASGLTVLVPQKLPPNDGAIAYGQVAVARQRIKSG 819 >UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PDU4_VIBFU Length = 766 Score = 872 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 277/765 (36%), Positives = 387/765 (50%), Gaps = 50/765 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPP 67 + I+G+VQGVGFRPFV++LA + L G V ND GV + ++ + + F +L PP Sbjct: 6 IEIKGQVQGVGFRPFVYRLAIEHQLKGWVINDARGVRIDVQGEQRQFDAFYRELLIQTPP 65 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LAR+D+V P + + S ++ + PD A C C E+ P R Y YP Sbjct: 66 LARVDNVALRPLDPTDFAAFQILSSSDDAEISVSVPPDQAICMDCRRELFDPNSRFYHYP 125 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FINCT+CGPRFTII+A+PYDR T MA F LCPAC + Y++P+DRR+HAQPV+C CGP Sbjct: 126 FINCTNCGPRFTIIKALPYDRHQTSMADFKLCPACARAYQNPMDRRYHAQPVSCAHCGPS 185 Query: 188 LEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + +S + A+ AA++ A QL G ++A+KG+GGFHL CDA + AVA LR KHR Sbjct: 186 VTLLSPQQTCIAKAHAAIERAAEQLIAGGVIALKGLGGFHLVCDATSLQAVARLRELKHR 245 Query: 246 PAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKY-----VPELCDDIAPDL 294 KPLAVM+ Q L + A+PIVL+ K + D++APD+ Sbjct: 246 ARKPLAVMVSDVAQAKHYVQGEALEWQTLKSQASPIVLMHKAEHTDAGRAPVADNVAPDV 305 Query: 295 NEVGVMLPANPLQHLLLQELQ-----CPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 + +GVML PL LL+ LQ PLVMTS N+SG P A +Q A D L Sbjct: 306 DCLGVMLAYTPLHLLLIDALQQRGCFAPLVMTSANVSGLPLATEAQQVFAMFGASLDSVL 365 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 HNR IV DDS+V+ + +LR +RGY P + L P L +GA K+T Sbjct: 366 DHNRPIVHACDDSLVQLAAGSMRVLRMARGYAPLSFPLA---NRAPATLAVGAQQKSTVA 422 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 Q LS +LGDL+D Q ++ +A ++Y + + V DAHPGY S+QW E Sbjct: 423 FAVRNQWFLSPYLGDLTDLDTQQRFVDATHYFPHLYQASTERWVADAHPGYFSTQWVNEQ 482 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 V HH+AH + +AE Q G V+ ++ DG G G++G +WGGE + + + Sbjct: 483 TSSALHVQHHYAHILSVMAESQL---NGPVLGVSFDGTGAGDDGTVWGGEVMIADRLGYQ 539 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAI 582 + L L GG+ A ++P R L A L + + + A+ + L Sbjct: 540 RIAHLRPFRLIGGEQAIREPERVLYALLLELMTPAEIQQLHLPAFAAWSDSRFQNLFHLW 599 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD 642 +PL SS GR FDA A LG T YEGE+ +E A +++P D Sbjct: 600 RNAERSPLCSSVGRLFDAWACLLGFV-TTPDYEGESGLQMENAARQAGEHQVALSLPWRD 658 Query: 643 NQLDLATFWQQWLNWQAPVNQRAWA---------FHDALAQGFAALMREQATMRGITTLV 693 QLD A QQ L + + F ALA+ + ++ A + LV Sbjct: 659 QQLDWAPALQQSLERGLASDDISAKRWACVCSDAFIGALAKAVIDIAQQHANL----PLV 714 Query: 694 FSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGV 736 SGGV NR L + D + +P D G++ GQ Sbjct: 715 LSGGVFQNRCLLDAIDAMYPDSACPFITGSHIPVNDSGIAAGQLW 759 >UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NVI5_HALUD Length = 766 Score = 870 bits (2250), Expect = 0.0, Method: Composition-based stats. Identities = 292/771 (37%), Positives = 406/771 (52%), Gaps = 38/771 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLRED---PET 56 M+ T V + + G VQGVGFRPFV++ A +L G V N GDG VE+ L + E+ Sbjct: 1 MSDRT--RVTVSVTGVVQGVGFRPFVYRTATGNDLAGRVKNTGDGRVEIVLEGEARGIES 58 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAE 115 FL L PPLARI++V E + L T F I ST + + I PD A C ACLA+ Sbjct: 59 FLSTLRTDPPPLARIENVTVEDGEPTALDT-FEIVASTDSSGGSGTIPPDTAMCDACLAD 117 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + R + Y C CGPR+T+IR +PYDRP T MAAFP+C C +Y +P DRR+H Sbjct: 118 LRDSSSRFHGYWATACVDCGPRYTVIRELPYDRPTTSMAAFPMCDDCRADYGEPSDRRYH 177 Query: 176 AQPVACPECGPHLEWVSHGEHAE--QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQ +ACPECGP L + +A + A+ A +L G++VAIKGIGG HLACDA + Sbjct: 178 AQTIACPECGPTLSLLDGDGNARAGGDDAIAKAGDRLADGELVAIKGIGGTHLACDATDP 237 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLV--DKKYVPE 285 V TLR R RP KP A+M P + + D R L PI+L+ ++ P+ Sbjct: 238 AVVETLRERTGRPEKPFALMAPDLEAVESVAQISDTERDALEDTRRPILLLDGRRENRPD 297 Query: 286 LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 D ++P L VGVMLP + L H L + ++ PLVMTS N+ G P A LADL G+ Sbjct: 298 WFDTVSPGLKTVGVMLPYSGLHHRLFEHIEGPLVMTSANMPGVPMATDRASILADLDGVI 357 Query: 346 DGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L+H+R+IV R DDSV R SG +RRSRG+VP++L LP + VL LGA+ Sbjct: 358 DAALVHDREIVMRCDDSVARFSGGQRRFVRRSRGWVPESLPLPSPAETAEDVLALGAEFD 417 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 T L + V SQ++GD+ + RE + ++++ P V DAHP +++++ Sbjct: 418 ATVALTQDGAVVPSQYVGDVDNPETVEYLRETVEHLRDLLGTDPDVVACDAHPDFLTTRE 477 Query: 463 AREMNLP-----TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 ARE V HHHAHAA+ LAE + + + DG G G +G++WGGE Sbjct: 478 AREYAEREGMAGPVQVQHHHAHAASLLAERE----RERAVVIAADGTGYGPDGSIWGGEV 533 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ-QQNWS 576 L + E +GGL +LPGG A +QP R L + + +V Q+ + Sbjct: 534 LDATLADFERVGGLSTFSLPGGTAAIEQPARLLASLLDGGDRIDELLLARGAVDSQRAAA 593 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 + + + +GIN P +S GR DAV+A LG P SYEGE A LEA A + + + Sbjct: 594 TVRQQVSQGINTPETTSAGRLLDAVSALLGVCPER-SYEGEPAMKLEAAAVDGAVLDYDI 652 Query: 637 TMPRVDN--QLDLATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 D +D + L ++ A ALA G A + A RG+ + Sbjct: 653 PFGTRDGARVVDARQLVRDLDALADDHAISDVAATAQWALAGGLADVAVAVAEDRGVDAV 712 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 F+GGV +N + + + A L +P GDGG++ GQ +AA R Sbjct: 713 GFTGGVAYNDAITRTIRDRVVAAGLDFLGHDRVPPGDGGIAYGQVAVAATR 763 >UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KXU6_9GAMM Length = 771 Score = 870 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 282/763 (36%), Positives = 396/763 (51%), Gaps = 38/763 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQ 63 ++ I G VQGVGFRPFV++ A+ + G V N GDGV V P E F L Sbjct: 13 VRLRFEIGGAVQGVGFRPFVFRTARHFGVTGHVANTGDGVIVEAEGAPCALEAFAQALQG 72 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGER 122 P A++ S + + ++F I ST G + ++PD ATC CL ++ P R Sbjct: 73 SAPAPAQLRSFRCQSIAL-RGDSDFVIGDSTVGVQRDAVLLPDLATCRLCLEDIFDPENR 131 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPF NCT CGPR++I+ +PYDR T M+ F +C C +EY DP DRRFHA+P+AC Sbjct: 132 RYLYPFTNCTACGPRYSILCELPYDRANTTMSGFSMCAECAREYADPQDRRFHAEPIACD 191 Query: 183 ECGPHLE-WVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + W HG+ + + AL A A ++ G I A+KG+GGFHL DARN+ AV TLR Sbjct: 192 TCGPQIALWDRHGDRIKVRGEALDGAAAIIRSGGIAAVKGLGGFHLLTDARNAEAVRTLR 251 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +RK RP KP A+M+P + + + LL + APIVL+ ++ V + +D+AP L Sbjct: 252 SRKRRPNKPFALMVPSLEVAEHLCFVNADEKSLLASSEAPIVLLRQRAVTGVTEDVAPGL 311 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 E+G+MLP PL HLLL L P+V+TS NLSG+P + ++ALA L +AD FLIH+R Sbjct: 312 CELGLMLPYTPLHHLLLHRLGFPIVVTSANLSGEPIVANEDEALARLGHLADVFLIHDRP 371 Query: 355 IVQRMDDSVVRE---SGEMLRRSRGYVPDALALPP-GFKNVPPVLCLGADLKNTFCLVRG 410 I Q +DSV+R + + +R RG P AL + G N VL LG K L+ Sbjct: 372 IAQASEDSVMRVILEAPQAIRCGRGRAPLALPVDSLGLGNHLSVLALGGHFKTAATLLIN 431 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 ++A + QH+GDLS + EA ++ + + D HP Y +++ A M P Sbjct: 432 DKATVGQHIGDLSTLAAEHTLAEAAGTLEALRGSKAAVIACDQHPDYATTRLAERMGRPV 491 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH AH + +AEH G V+ + DG G+G +G +WGGE L+V Sbjct: 492 VPVQHHVAHVVSVMAEHGL---SGPVLGIAWDGTGLGPDGTIWGGEFLQVRNDSWMRKAH 548 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQQNWSVLARAIERG 585 L LPG + A ++P R+ + E + + A+ + +L + +ERG Sbjct: 549 LRPFRLPGAETAIREPRRSAVGMLYEAFGACGVVENTHLACIAAFSEPEREILCQMLERG 608 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-- 643 I +P SS GR FDA AA LG P + S+EGEA LEALA + +P + Sbjct: 609 IQSPWTSSAGRLFDAFAAILGLTPVS-SHEGEAPMRLEALADASSCAPYPFDINAPQGCP 667 Query: 644 -QLDLATFWQQWLNWQAP---VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 +D L A A H A A++ + T+ +GG Sbjct: 668 LVIDWFPMVHAVLQDLAADVRNRTIAGRIHGTFAAMMLAIV----ESTDVGTIALTGGCF 723 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 NRLL A + A ++ ++LP DGGLSLGQ V A Sbjct: 724 QNRLLTELAARQIEQAGRQVVLARALPPHDGGLSLGQAVWARR 766 >UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLW6_DESAH Length = 733 Score = 870 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 284/732 (38%), Positives = 395/732 (53%), Gaps = 39/732 (5%) Query: 40 CNDGDGVEVRLREDPETF---LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIR--QST 94 N GV + L DP+ ++ + PPLA + +V EP + +F I S+ Sbjct: 2 LNTAQGVTLILEGDPDNIAPCCKKIKESGPPLAIVSTVNVEP-TGVRGYDDFRIITSASS 60 Query: 95 GGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMA 154 + I PD + C ACL EMN P RR+ YPFINCT+CGPR+TII+ +PYDR T MA Sbjct: 61 NQPRSALISPDVSVCQACLDEMNDPTNRRHGYPFINCTNCGPRYTIIKDLPYDRAKTSMA 120 Query: 155 AFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA-EQEAALQAAIAQLKMG 213 F +CP C EY DPL+RRFHAQP AC CGPH+ + + A+ AA L G Sbjct: 121 EFTMCPDCQAEYDDPLNRRFHAQPNACEVCGPHVWLTDNRGVVLLNKGAITAAGEHLNQG 180 Query: 214 KIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDA------ARQL 267 IVA+KG+GGFHL +A + AV LR RK+RP KP A+M + L L Sbjct: 181 AIVAVKGLGGFHLGVNAFDEAAVMALRTRKNRPHKPFALMARDLETLRKYTKVTQPEEAL 240 Query: 268 LTTPAAPIVLVDK-----KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTS 322 LT PIVL++K L +AP +G+MLP PL HLL + LVMTS Sbjct: 241 LTAFHRPIVLLEKYKCTDPGGRPLASGLAPGNRRLGIMLPYTPLHHLLFETGPEMLVMTS 300 Query: 323 GNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE--SGEMLRRSRGYVPD 380 GN SG+P +I N+ AL+ IAD FL+HNR+I R DDS+V+ LRRSRGY P Sbjct: 301 GNRSGQPLSIDNDDALSAFAHIADFFLLHNREIYFRADDSIVQYQKGTRFLRRSRGYAPL 360 Query: 381 ALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQN 440 ++L +P VL G LK+T CLV+ +A LSQH+GDL D+ +++++ ++ Sbjct: 361 PVSLKHR---IPQVLACGGGLKSTVCLVKENRAFLSQHIGDLDDEKSFEFYKKSVDHLKT 417 Query: 441 IYDFTPQYVVHDAHPGYVSSQWAREM-NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 I D P V HD HPGY+S+ +AR + + T V HHHAHAAAC+AE+ V+A+ Sbjct: 418 ILDIRPGIVAHDLHPGYMSTTYARALKGVETIGVQHHHAHAAACMAENGLD---EPVVAV 474 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 TLDG G+G + +WGGE L E L +V +PGGD AA +PWR ++ + Sbjct: 475 TLDGTGLGTDNTIWGGEILTCTLDRFERRAHLLSVPMPGGDKAATEPWRMGISWLYHCLG 534 Query: 560 ---EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + ++ + + L + ++R IN P+ SSCGR FDAVAA LG +++E Sbjct: 535 PGVADLDTPLVRTIDPEKIAFLIQMMDRRINCPMTSSCGRLFDAVAAILGLGHH-VTFES 593 Query: 617 EAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW------LNWQAPVNQRAWAFHD 670 +AA ALEAL+ + + + + + + + F + L + FH+ Sbjct: 594 QAAMALEALSTAEDDKGYKIDIQTDETGMLVMDFSRAILGIVDDLALGLSIPNLGSKFHN 653 Query: 671 ALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDG 728 + F ITT V SGGV +NR++ ++ L FT+ +P GDG Sbjct: 654 TVVDSFVRSAARVGEQAHITTAVLSGGVFNNRIILRKMTDGLRDLGFTVYSHTRVPCGDG 713 Query: 729 GLSLGQGVIAAA 740 G+SLGQ V+A A Sbjct: 714 GISLGQAVVAGA 725 >UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BTW9_9ACTO Length = 774 Score = 869 bits (2247), Expect = 0.0, Method: Composition-based stats. Identities = 291/778 (37%), Positives = 395/778 (50%), Gaps = 49/778 (6%) Query: 1 MAKNTSCGVQLR----IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET 56 M + +++R +RG VQGVGFRP V ++A Q + G V ND + V + + E Sbjct: 1 MRDMVARRLEMRRAYELRGVVQGVGFRPHVAKVAAQYPITGFVGNDDESVFIEAQGAREA 60 Query: 57 ---FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPAC 112 F+ + PPLA + + TEF I S T I PD ATCP C Sbjct: 61 VDGFMETMLATLPPLASVLHSSSTDLPEQKGETEFRIVPSRRRPGARTLIPPDTATCPDC 120 Query: 113 LAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDR 172 AEM P RRYRYPF CT+CGPR TI+ +PYDR T M FP+CPAC +EY +P +R Sbjct: 121 QAEMADPTNRRYRYPFTTCTNCGPRATIMVDLPYDRDTTTMVKFPMCPACHQEYTNPTNR 180 Query: 173 RFHAQPVACPECGPHLE---------WVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIG 222 R+HAQPV+C +CGP L W G+ AAL A +L+ G+I+A+KGIG Sbjct: 181 RYHAQPVSCYDCGPVLWVSPADAPDLWPPEGDRRPLIAAALDEARQRLRAGQILAVKGIG 240 Query: 223 GFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIV 276 GFHL CDARN AVA LR RK R KP AVM+ A AR + L T A PIV Sbjct: 241 GFHLMCDARNEAAVARLRKRKDRGDKPFAVMVADAVTAARLARLDADQLRTLQTAARPIV 300 Query: 277 LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL--QELQCPLVMTSGNLSGKPPAISN 334 + +L +AP L +VG++LP PL LL + Q LV TSGNL+G+P +N Sbjct: 301 IAPFGQEYDLAPAVAPGLGDVGILLPYAPLHLELLSGECAQMALVATSGNLAGEPLCFTN 360 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML---RRSRGYVPDALALPPGFKNV 391 + A L GI D F+ H+RDI M+DSV + ++ RRSRGY P +AL Sbjct: 361 QDAAERLAGIVDAFVFHDRDIHLPMEDSVFLANAQVTIPSRRSRGYAPLPVALSQP--AT 418 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P+L +G +LKNTFCL G A +S H+GD+ Q + A+ + N P+ VV Sbjct: 419 VPILAVGGELKNTFCLAHGSWAHISGHIGDMGTLASQEAFDRAVTQLLNFQRQRPEKVVC 478 Query: 452 DAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP Y + WA ++ V HH AHA + LAEH + +++DG G G Sbjct: 479 DLHPNYSTVSWAERFAASHDIELTQVQHHVAHAYSLLAEHSCL---DPAVVVSVDGTGYG 535 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G +WGGE L + + + +P +L GGD A + PWR L + +W + Sbjct: 536 TDGTIWGGEVLDIRGAQWQRSAHVPTFSLVGGDRAVRYPWRVALGIAHDWGMDWITEKIS 595 Query: 568 ASVQQQ-----NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 A + Q ++ + G +SCGR FDA AA LG ++YE +AA L Sbjct: 596 AEIGSQPGKSTELELVKSQLASGFGVSATTSCGRLFDAAAAILGIRTE-VTYEAQAAMEL 654 Query: 623 EALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMRE 682 E +A S ++P+V + ++ PV +RAWAFH LAQ + Sbjct: 655 EHVATSWANAHPEASLPQVGS---YQELVEKLGEVDRPVGERAWAFHVGLAQLLGEQACQ 711 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 A T+ +GGV NR+ +L +L Q++P DGGLSLGQ A Sbjct: 712 VAEQADTKTVGLTGGVALNRMFTRHFVSFLGEGGCRVLTHQNVPPNDGGLSLGQVWAA 769 >UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C4206D Length = 815 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 267/809 (33%), Positives = 406/809 (50%), Gaps = 77/809 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 +++ + G VQGVGFRPFV+++A +L L G V N G+ VE+ L+ F+ +L Sbjct: 3 SIKVLVEGIVQGVGFRPFVYRIATELELVGYVRNLGNVVEIILQGTDNQLADFIYKLQNE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGERR 123 PP+A+I+++ E T+FTI++S+ + + I PD A C CL E+N P RR Sbjct: 63 LPPIAKINNLRTEDIEIDSPYTDFTIKESSDSFSGTSVIPPDLAICDKCLEEINDPQNRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y+YPF CT CGPRFT+I +PYDR T M FPLC C+ EY++PLDRR+HA+ C Sbjct: 123 YKYPFNACTDCGPRFTVIENVPYDRDKTTMDDFPLCDECEIEYKNPLDRRYHAEASCCEV 182 Query: 184 CGPHLEWVSHGEHA---------------------EQEAALQAAIAQLKMGKIVAIKGIG 222 CGP L+ + + E L+ L GKI AIKGIG Sbjct: 183 CGPSLKLMKNETEEGISTDKEGNEIKAMKRTAIDTESNDPLKDTARLLDEGKIFAIKGIG 242 Query: 223 GFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIV 276 G HL + ++ AV+TLR R R + AVM P + + D + L + PIV Sbjct: 243 GTHLVANVKDEKAVSTLRERLGRKNQAFAVMSPDIETVRTFAIVSDEEEKTLLSKERPIV 302 Query: 277 LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNE 335 ++ K + + ++P L+ +GVMLP PL HLL E P +MTS N+ G+P I+NE Sbjct: 303 ILKKSKDYDFAESVSPRLHNIGVMLPYAPLHHLLFNETDSPAYIMTSANVPGEPMMITNE 362 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVP 392 + L +L IAD +LIHNR I+ R DDSV R +RRSRGY P+ L + ++ Sbjct: 363 EILQNLDEIADYYLIHNRRILNRCDDSVARFRNNELAFIRRSRGYTPEPYDLKGKYTDIN 422 Query: 393 P------VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF-T 445 P +L LG +L TF +++ +A +SQH+G+ + +EA++ M I + Sbjct: 423 PDFDNLNILALGPELDVTFTILKNSKAYVSQHIGNTNKYRTYEFLQEAIKHMMRITKTDS 482 Query: 446 PQYVVHDAHPGYVSSQWARE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 + D HP + +++ A+E + P V HHHAH + L +H D ++I + Sbjct: 483 FDAIACDLHPQFFTTRLAKEYAEKYDCPLIPVQHHHAHGISLLNDHYDDNDLNEMIIIAA 542 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG+G G +G WGGE L + + E + L +PGGDL K P R + + ++ Sbjct: 543 DGVGYGADGNSWGGEILYTDIKGFERMASLMPQKMPGGDLCTKYPARMMASILSNPESDY 602 Query: 562 Q---------------NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG 606 + NY ++ L R +E +N + +S GR D+V+ AL Sbjct: 603 ENEKYTKEYIEELLNNNYLDSFKHGSVEIKSLFRQMETNLNVGINTSTGRVLDSVSTALH 662 Query: 607 CAPATLSYEGEAACALEALAASCHGV----THPVTMPRVDNQ------LDLATFWQQWLN 656 SYEGEA+ LE+ A G P+ + +++ LD + ++ Sbjct: 663 ICDER-SYEGEASMKLESYAFEYKGEGSLDDFPIIVKEYEDENGKRLILDTTAILRYIID 721 Query: 657 ---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL- 712 +++ A A A++ G A L E A +GITT+ +GGV +N + + Y+ Sbjct: 722 KIEEGEDLHKIAAAGQKAVSIGLAKLAIESAKEKGITTIGATGGVFYNEAITDYIKTYIE 781 Query: 713 -ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 F + + GDG +SLGQ ++A Sbjct: 782 KEGFDFIQHINSCPGDGSVSLGQAIVAGT 810 >UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3M0_NITSB Length = 703 Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats. Identities = 249/750 (33%), Positives = 369/750 (49%), Gaps = 62/750 (8%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET-FLVQLYQHCPP 67 +++ ++G VQGVGFRPFV++LA +L L G + N DGVE+ + + E FL L + PP Sbjct: 1 MRIFVKGIVQGVGFRPFVYKLANELGLAGFIRNCSDGVEIVIEGENEELFLEHLQSNLPP 60 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 LA+I S++ + FTI +S G T + PD + C ACL ++ P RRYRYP Sbjct: 61 LAKIFSLKIQSTPKQN-FQSFTIIKSQEGQKETFLSPDISICDACLQDLFDPQSRRYRYP 119 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 INCT+CGPRFTII+ +PYDR T MA FP+C C +EY DP R FHAQP+ C CGP Sbjct: 120 LINCTNCGPRFTIIKDLPYDRKHTSMAKFPMCQECQREYHDPNSRFFHAQPIGCNSCGPE 179 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 L + E A+ A + + G+IVAIKG+GG+HL C +++ LR K RP Sbjct: 180 LFY----ESLSGYEAIGAVVKDILTGEIVAIKGVGGYHLVCLPKSA---YKLRQIKRRPK 232 Query: 248 KPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 KP A+M + + L+T+ PIV+V K ++ D+APD++ +GV L Sbjct: 233 KPFALMFKSIGKIKEVCHINEYEENLVTSKERPIVIVKAK---KIFADVAPDIDRLGVFL 289 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P +P+ +LL + PLV+TS N+S +P E +++ L +NR+IV+ DD Sbjct: 290 PYSPIYYLLFSLIDSPLVVTSANISDEPIVKDEE----NIKRFTQKVLYYNREIVRSCDD 345 Query: 362 SV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQH 418 SV + R SRGY P + L K +P +L +GA KNT L +LS H Sbjct: 346 SVLVGIDNRPLFYRLSRGYGPKSFYLS---KQLPAILAVGARQKNTISLGFANNVILSPH 402 Query: 419 LGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHA 478 +GD+ + + + + + IYDF+P+ VV D HPGY ++Q+A+ +++ T V HH A Sbjct: 403 IGDIKNIQSYNYFIQVIEDFKKIYDFSPEVVVCDKHPGYETTQYAKSLDITTVEVQHHLA 462 Query: 479 HAAACLAEHQW---PLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H A AE + PL + + DG G G++G +WGGE + E + Sbjct: 463 HIYAAKAEMELTHHPLSQNLFLGFSWDGTGYGDDGKVWGGEVFVGD----ERKYHFDYLK 518 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 + GG+ A K + ++ E ++ + A E+ IN SS G Sbjct: 519 IAGGEKAIKDIRLIAWSLLKKYGFEVED------------KLFHLAYEKNINCFETSSVG 566 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWL 655 R FDAVA G YEG +E + R+ +D + + Sbjct: 567 RLFDAVAFLAGLCTY-QEYEGYTGLLVEKAYQAREDRYEFYIHDRMIT-IDFLSLIKD-- 622 Query: 656 NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADF 715 F + L + + + ++ SGGV N+ L L Sbjct: 623 ----KKADIPAKFLNTLTAIIVEIAKREK-----LPVILSGGVFQNKTLLENTIKKLQQN 673 Query: 716 TL--LFPQSLPAGDGGLSLGQGVIAAARWL 743 ++ FP +P DGG+SLGQ A + Sbjct: 674 SIPYFFPTQIPINDGGISLGQLWYALENYK 703 >UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Frankia sp. EuI1c RepID=D1VJK4_9ACTO Length = 807 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 294/811 (36%), Positives = 402/811 (49%), Gaps = 90/811 (11%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLAR 70 G +G PFV+ LA + +L G+V N GV + + F++ L PPLA Sbjct: 3 TGSCRGWVSAPFVYALASREHLVGEVANSPAGVHIEASGSAAALDAFVIALRDEAPPLAV 62 Query: 71 IDSV-----------------------EREPFIWSQLPTEFTIRQST-GGTMNTQIVPDA 106 ++ V R P + F I S G +T + D Sbjct: 63 VEDVVVRRRPPPDGRRASGPGGADGGGTRAPRPGAPTAAGFRITASDPAGERSTLVSADC 122 Query: 107 ATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEY 166 ATC CLAE+ P +RRYRYPFINCT+CGPRFTIIR +PYDRP T MA F +CPAC EY Sbjct: 123 ATCADCLAELADPADRRYRYPFINCTNCGPRFTIIRDVPYDRPATTMAGFAMCPACAAEY 182 Query: 167 RDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 DP +RRFHAQPV CPECGP L + ++ + L+ G ++A+KG+GG+HL Sbjct: 183 HDPGNRRFHAQPVCCPECGPRLRLLDRAGRPLDADPIERSAELLRAGAVLAMKGLGGYHL 242 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVD- 279 A DAR+ A A LR RKHR KP AVM+ + A +LLT PIVL+D Sbjct: 243 AVDARSDAAAARLRGRKHRADKPFAVMVSDVAAARELCAVGPVAERLLTGRRRPIVLLDL 302 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 P + +AP ++G+M P P HLLL PLV+TSGN+S +P +++A Sbjct: 303 LPGGPGVARSVAPGTRQLGLMTPYTPAHHLLLAAFSGPLVLTSGNVSDEPIVYRDDEAFG 362 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRESG------------------------------- 368 L IAD FL+H+R I R DDSVVR Sbjct: 363 RLGPIADYFLVHDRPIHVRADDSVVRVLPSWPGEPRRERPPAGEPSRRPTNKPGSPAAGE 422 Query: 369 --EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 +++RR+RGY P+ LA+ G++ PVL GA+LK+TFCL RG A +SQH+GDL + Sbjct: 423 REQLVRRARGYAPEPLAM--GWETPRPVLACGAELKSTFCLTRGRYAFVSQHIGDLENYE 480 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAA 482 + + + ++D P+ + HD HP Y+S+++ A + L V HHHAH A+ Sbjct: 481 TFRAFTAGVAHYERLFDVRPEVIAHDLHPEYLSTKYALDRAEDDGLGVVGVQHHHAHIAS 540 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLA 542 CLA+++ G V+ L DG+G G +G LWGGE L + L L VA+PGG A Sbjct: 541 CLADNRH---SGPVLGLAFDGLGYGTDGTLWGGEVLLADLTRFTRLAHLDPVAMPGGAAA 597 Query: 543 AKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVA 602 + PWR A + + +W + +RG+ APL SS GR FDAVA Sbjct: 598 IRSPWRMAAAYLSAAGVDTAGLAVRER-NAAHWESVVAMADRGVAAPLTSSAGRLFDAVA 656 Query: 603 AALGCAPATLSYEGEAACALEALAASCHGVTHPVT----------MPRVDNQLDLATFWQ 652 A L T++YEG+AA LE LA ++P+ P DL Sbjct: 657 AILDVRD-TVNYEGQAAIELEQLADQAERESYPLPGIVRPPRPAVDPGRIQGTDLVAAVV 715 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 + L + A FH LA+ + A G+ SGGV N+ L + L Sbjct: 716 EDLRAGTDRARVAARFHATLARTIVTVCECLAEQTGVRAAALSGGVFANQRLLNEVGAGL 775 Query: 713 --ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 A T+L +P DGG+SLGQ +A+A+ Sbjct: 776 RAAGLTVLTHSRVPTNDGGISLGQAAVASAQ 806 >UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosarcina RepID=Q46FH7_METBF Length = 767 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 271/757 (35%), Positives = 400/757 (52%), Gaps = 34/757 (4%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPP 67 L I G VQGVGFRPF+ QLA+ L G V N G+ VE+ + E + F+ ++ + PP Sbjct: 8 LHITGTVQGVGFRPFISQLAKVHGLFGYVKNLGNYVEILVEGNKESLDNFIKEIPEKKPP 67 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERRYRY 126 LA++ ++ + + ++F I S G N+ I PD A C C +E+ P R + Y Sbjct: 68 LAKVKEIKTKNTPFF-GYSKFIIVPSESGVFENSIIPPDTAICEQCRSEIFDPSSRYFHY 126 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT+CGPR+T +R +PYDR T MA FPLCP C+ EY DPL+RR+HAQPV CP+CGP Sbjct: 127 PFTVCTNCGPRYTTVRTLPYDRENTTMADFPLCPECETEYTDPLNRRYHAQPVCCPKCGP 186 Query: 187 HLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 + + + A+ A L+ G I+AIKG GGFH+ACDAR V LR R Sbjct: 187 EIWLSDSEGNVLVKGYEAIIHASDLLQQGSILAIKGFGGFHIACDARKEMPVNELRRRLR 246 Query: 245 RPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 RP +P AVM A+ L R+ LT+ PI ++ L + + L+ +G Sbjct: 247 RPEQPFAVMAKNAEVAETFAELEGVGREYLTSYRRPITVLPSSRESGLAESVTSGLHNIG 306 Query: 299 VMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 VMLP Q+LL + VMTS NL G+P + N++AL L+GI D +L+HNR I Sbjct: 307 VMLPYTGTQNLLFDRVPDAVYVMTSANLPGRPMVVENKEALEKLKGIVDYYLLHNRVIAN 366 Query: 358 RMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R DD+V+R +RRSRG+VP+ + LP K + +GA++ +T + +G+ A Sbjct: 367 RNDDTVIRVVNGKAAFIRRSRGFVPEPVELPFEVKAS---IGVGAEMNSTVTVAKGKLAY 423 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP-TQTV 473 +SQ++G+ S E +R + + P Y D HP + ++++A +M T V Sbjct: 424 VSQYIGNTSHVETFRYHSEVVRHLIQLTGIEPLYWGCDLHPAFNTTRFALKMGGEDTLQV 483 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH AH A +A++ PLD ++ + LDG+G G +G +WGGE +Y E +G L Sbjct: 484 QHHQAHMLALMADNSLPLDS-RILGIALDGVGYGTDGTVWGGELFESSYFGYERIGHLFP 542 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVP--EWQNYSETASVQQQNWSVLARAIERGINAPLA 591 +PGGDLA++ P R +L + E + + +S + + +E G+N + Sbjct: 543 QPMPGGDLASRIPSRMVLGILFEKLGRAELEKLPLSFPKGAMEFSTVMKQLETGVNVIRS 602 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDNQ----LD 646 SS GR DA AA LG +YEGE A LE+ A S H V P+ ++ LD Sbjct: 603 SSTGRVLDAAAALLGICEIR-TYEGEPAMKLESAATKSTHSVDLPIIFTNDNDSGVPLLD 661 Query: 647 LATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 L+ + P A+A ++ A G + L A RG+ + SGGV +N + Sbjct: 662 TTELLLGAYELSGKYPPVDLAFAVEESFATGISELAISLAAKRGLEKIGLSGGVAYNNHI 721 Query: 705 RARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 + +A + A F L + +P GDG +S GQ + A Sbjct: 722 TSCIARTVTEAGFEFLVHRQVPCGDGCISFGQALAAG 758 >UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Anaeromyxobacter RepID=A7H7N6_ANADF Length = 781 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 309/771 (40%), Positives = 403/771 (52%), Gaps = 43/771 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 G ++R+ G VQGVGFRPFV++L+ L G V ND GV + + F L Sbjct: 16 GRRVRVTGTVQGVGFRPFVYRLSHAHGLSGRVWNDASGVTIEAFGSAGALDRFERALRTD 75 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERR 123 PP A ++++ EP F I +S + I PD ATCPAC E+ P +RR Sbjct: 76 HPPAAVVETLRSEPIAGEPS-VGFEIVESGASSERRAAIPPDLATCPACERELRDPHDRR 134 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YPF NCT CGPRFTI PYDRP T MA+F +C AC +EY DPLDRRFHAQP ACP Sbjct: 135 HGYPFTNCTDCGPRFTIAHGAPYDRPATTMASFVMCEACAREYADPLDRRFHAQPNACPA 194 Query: 184 CGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + V+ E + L G I A+KGIGGFHLACDA +S AVATLRAR Sbjct: 195 CGPRVRVVARDGAPVEAADPIGHVGRALAAGAIAAVKGIGGFHLACDATSSAAVATLRAR 254 Query: 243 KHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVP---------ELC 287 K R KPLAVM+ D + +A LL + PIVL ++ L Sbjct: 255 KRREEKPLAVMVRDLDEARRLAEIGEAEAALLASVERPIVLCRRRPEARFDGLTVSGSLA 314 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 ++APD VG++LP PL HLLL PLVMTSGNLS +P A +++AL L GIAD Sbjct: 315 PEVAPDSPLVGLLLPYAPLHHLLLGAAARPLVMTSGNLSEEPIAFEDDEALRRLGGIADL 374 Query: 348 FLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 FL+H+R I R DDSV R ++RRSRGYVP + + F PVL +GA LKNT Sbjct: 375 FLVHDRPIASRCDDSVARTVAGRPLVMRRSRGYVPRPVIVHRRF--ARPVLGVGAQLKNT 432 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 FCL RG++AVL H+GDL + + A+ ++ P+ V D HP Y+S+++AR Sbjct: 433 FCLARGDEAVLGPHVGDLDNLETYAAYEGAIARLEGFLALRPEVVACDLHPLYLSTRYAR 492 Query: 465 E----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 E + +P V H A A G V+AL DG G+G +GA WGGE L V Sbjct: 493 ERAAALGVPLVEVQ---HHHAHAAAAMAEHGLDGPVLALAWDGTGLGTDGAAWGGELLLV 549 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETASVQQQNWSV 577 E L + L GGD A ++PWR LA L E + +V +V Sbjct: 550 ERDRFERLATFRPLPLAGGDRAIREPWRIALAAVLDAFGEDAPLEALPLFRAVPPAELAV 609 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 + R + G+NAP A GR FDA A AL YEG+ A AL+ A +P Sbjct: 610 VRRLLATGLNAPPAHGAGRAFDA-AGALALGRGVSRYEGQVALALDNAATGAAEAPYPFD 668 Query: 638 MP--RVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + R +LDL W+ + AP + FH ALA+ A L+R + G + Sbjct: 669 LDTSRPVTELDLRPLWRALVADVIAGAPPAAVSSRFHAALARAGAELVRRASRTTGRLPI 728 Query: 693 VFSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 V +GG N L + L+ F + +P GDGG++LGQ ++A AR Sbjct: 729 VLTGGCFQNARLAEGILGELSLSFEVYPHGQVPPGDGGIALGQALVADARA 779 >UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DZ8_THICR Length = 775 Score = 862 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 279/777 (35%), Positives = 387/777 (49%), Gaps = 51/777 (6%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + S ++L+I G+VQGVGFRPF++QLAQ L LHG V N+ GV V+L+ P+ F Sbjct: 1 MTLDASIQLRLQIFGRVQGVGFRPFIFQLAQSLGLHGSVANNTQGVVVQLQGSPQAIQQF 60 Query: 58 LVQLYQHCPP----LARIDSVEREPFI--WSQLPTEFTIRQS---TGGTMNTQIVPDAAT 108 L P A +D +E +P ++ F+I S G QI PD A Sbjct: 61 QQCLTTQKPAFFPKQAVVDRIESDPVPSAEQEVFQSFSIMDSSSDDQGAQAIQISPDLAV 120 Query: 109 CPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRD 168 C CL E + P RRY PFINC+ CGPR++I+ PYDR + M F +C AC EY D Sbjct: 121 CDRCLQEFHDPNSRRYHDPFINCSDCGPRYSIVSQSPYDRLHSSMQPFSMCEACATEYHD 180 Query: 169 PLDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 P +RRFH Q + C +CGP + + AE E A+Q +LK +VA KG+GGFHL Sbjct: 181 PNNRRFHTQGICCQDCGPTIRLFDALQTPLAEGEDAIQQIAQRLKTSGLVAFKGVGGFHL 240 Query: 227 ACDARNSNAVATLRARKHRPAKPLAV------MLPVADGLPDAARQLLTTPAAPIVLVDK 280 CDA +S V LR +KHR KPLAV M L +LLT+ PIVLV+K Sbjct: 241 LCDATDSETVTRLRQKKHRATKPLAVLCANLEMAQQLAHLAPHEIELLTSEVKPIVLVEK 300 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + LCD IAP++N++GV L PL HLL Q + PLV TS NLSG+P + Sbjct: 301 RSDTALCDAIAPNINQLGVFLAYTPLHHLLFQYIDFPLVATSANLSGEPILYEVSRVFEK 360 Query: 341 LQG----IADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALA-LPPGFKNVP 392 L + + L +R+IV DDS+V+ +LR RG P L Sbjct: 361 LCHPDRALVEAVLDFDREIVNPSDDSIVQSINGKPMILRLGRGLAPYYQPLLHQETNESQ 420 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 VL +GA K+ G++A+LS +LG+L ++++ + ++ TP VV D Sbjct: 421 TVLAVGAQQKSAMACADGKRAMLSPYLGELGTLAAFHRFQQTFQNFTTLHHLTPNQVVSD 480 Query: 453 AHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 H GY S QWA + LP TV HH+AHA AC+AEHQ V+A DG+G+G+ Sbjct: 481 LHSGYASHQWAADYAQQNALPYTTVQHHYAHALACMAEHQLE---SSVLAFCWDGMGLGD 537 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NY 564 + A+WGGE L + E + + L GGD A++QP R LA + Sbjct: 538 DNAIWGGEVLVADTAGYERVLHVKPFKLLGGDQASRQPRRVALAMLFDHYSLEAVLEFDL 597 Query: 565 SETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA 624 + QQ L ++ +N+P +SS GR FD VA+ G TL YEG++ LEA Sbjct: 598 PTVQAFSQQEIEQLYCLYQQNVNSPFSSSMGRVFDTVASLCGIV-QTLDYEGQSGLWLEA 656 Query: 625 LAASCHGVTHPVTMPRVDNQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMR 681 L + VT Q+D +Q + ++ R F +AL ++ Sbjct: 657 LYDA--AVTDAYDCRIEQQQIDFEPMIEQLILDHQQGVAISTRVSRFLNALVN----VID 710 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGV 736 + +V +GGV N+ L L + AD F Q P DG ++LGQ + Sbjct: 711 TISDQFKSLPVVVTGGVFQNKTLMTILENRFADKAQPFYFQQRTPLNDGSIALGQLM 767 >UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridium RepID=A5I2V8_CLOBH Length = 812 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 262/794 (32%), Positives = 404/794 (50%), Gaps = 71/794 (8%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQ 60 N+ ++I G VQGVGFRPFV+ A + NL G V N G VEV L E+ ++F+++ Sbjct: 10 NSKKRYLIKIEGIVQGVGFRPFVYNRATEFNLKGYVKNKGGMVEVDLEGYKENIKSFILE 69 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTP 119 L + P +A+I+ ++ + +FTI++S+ + I PD A C C+ E+N Sbjct: 70 LIKSPPIMAKIEDLKCKFLKP-IDYKDFTIKKSSNEKNSVKFISPDVALCKNCIKELNLS 128 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 +RY Y FINCT CGPR++II+++PYDR T M F +C +C +EY P +RRFHA+P Sbjct: 129 TNKRYEYGFINCTDCGPRYSIIKSLPYDRENTTMKKFTMCNSCKEEYNIPDNRRFHAEPN 188 Query: 180 ACPECGPHLEWVSHGEHAE-----------------------------------QEAALQ 204 C CGP L + + + ++ + Sbjct: 189 CCSLCGPSLILLDNKKQVICTNSKKEYINNTSNNNYYNENKIHESYINVANLSYKKHPIY 248 Query: 205 AAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDA- 263 AI +K G IVA+KGIGGFHL CD +N A+ LR RK RP KPLA+M + + Sbjct: 249 TAIELIKKGYIVAVKGIGGFHLVCDGKNKKAIENLRIRKKRPHKPLAIMCKDLKIVKELC 308 Query: 264 -----ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPL 318 Q+L PI+++ KK L D+I+P +GVMLP +PL +LL +E + Sbjct: 309 YVSKLEEQILEGTKKPILILKKKATNILPDNISPFNKHLGVMLPYSPLHYLLFKEGLDII 368 Query: 319 VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSR 375 + TSGN+SG+P N +A+ +L+ IAD FLIHNRDI +DDSVV+ + ++R R Sbjct: 369 IATSGNVSGRPMEYKNCEAIENLKTIADYFLIHNRDIHTPIDDSVVKVINKKESLIRIGR 428 Query: 376 GYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREAL 435 GY P L + K +L GA+ KNTFCL + +SQ++GDL + + + Sbjct: 429 GYAPYTLNI----KTKNELLAKGAEEKNTFCLSQKGYVYMSQYIGDLKNIDCYNRHLNTI 484 Query: 436 RLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGD 495 +Q + D P+ + D HP + ++ + + V HHHAH +C+ EH Sbjct: 485 EHLQTLLDTNPKISMEDLHPNFNTNYENKNYD-RIIKVQHHHAHMVSCMVEHSL---FDR 540 Query: 496 VIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL 555 VIA+ DG G G++ ++WGGE L + E +G L V + GGD + K+PWR L+ Sbjct: 541 VIAVVFDGTGFGKDNSIWGGEFLIGDRTYFEKVGHLKKVKIQGGDKSIKEPWRCALSYLY 600 Query: 556 RFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYE 615 ++ S +V+++ ++ +A+ IN +SS GRFFDAV + +G +SY+ Sbjct: 601 SI--NYEESSIIKNVEEEKIKIIKKALYNNINCYTSSSMGRFFDAVTSLIGIR-NMVSYD 657 Query: 616 GEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQQW---LNWQAPVNQRAWAFHD 670 G+A LE + + + ++ ++DN Q+D L ++ + FH+ Sbjct: 658 GQAPIELENIIDEPISLYYNYSINKIDNVFQIDYKDIILGIIKDLKENKDLSTISSKFHN 717 Query: 671 ALAQGFAALMREQATMR----GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLP 724 + L+ + + +V SGGV N L + L F + F + +P Sbjct: 718 TVIDFTCNLVCKIKKTYEMKCKLDNVVLSGGVFQNNYLLKGVYRTLKDNGFKVFFNEKVP 777 Query: 725 AGDGGLSLGQGVIA 738 D G+SLGQ I Sbjct: 778 INDEGISLGQLAIG 791 >UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCDBC7 Length = 780 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 299/773 (38%), Positives = 394/773 (50%), Gaps = 40/773 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQL 61 R+ G VQGVGFRPFV++LA +L+L G V ND GV + P ++F L Sbjct: 14 ARQRRAFRVSGIVQGVGFRPFVYRLAVRLSLGGWVLNDSAGVGIEAEGTPAALDSFGEAL 73 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPG 120 P A + +V F I S G T + PD A C C E+ + Sbjct: 74 RTQAPLAAAVTAVTYTETAIL-GEVLFRILPSPAGEPARTLVSPDLAVCADCRREILSET 132 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RR Y F NCT+CGPR++IIR +PYDRP T MAAF +CPAC EY DP DRRFHAQP A Sbjct: 133 DRRQGYAFTNCTNCGPRYSIIRGVPYDRPLTSMAAFHMCPACQHEYDDPADRRFHAQPNA 192 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C CGP + ++ G A+ L+ A + G IVAIKGIGG+HLACDAR+ AV LR Sbjct: 193 CAACGPSYQLLAEGAAADG-NPLEKAREIIAAGGIVAIKGIGGYHLACDARSDEAVTRLR 251 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE--LCDDIAP 292 RK R AK LAVM + + + + L +PAAPIVL+ ++ E + +AP Sbjct: 252 RRKRREAKALAVMAGALETVRRLCAVSEEEERWLASPAAPIVLLQRRPDAEDAVAPSVAP 311 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 +GVMLP P+ LLL VMTS NLSG+P + A L IAD L+HN Sbjct: 312 GNPCLGVMLPYAPIHFLLLAP-DDLWVMTSANLSGEPIIYDDAAAEQGLAEIADAILMHN 370 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+IV R+DDSV+R +++RRSRG+ P LALP F VL GA+LK+TFCL R Sbjct: 371 REIVHRVDDSVLRMMAGGRQIVRRSRGFAPTPLALP--FAPQASVLAGGAELKSTFCLTR 428 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G +A LS+H+GDL+ + + E + + ++ P+ + D HP Y+S + A Sbjct: 429 GNEAFLSEHIGDLTHRSVLASYEETIAHYEQFFETKPELLAADLHPAYLSGRCLAARAER 488 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +P V HHHAH AA LAEH V+ LDG G G++G WGGE L + Sbjct: 489 EGIPLVRVQHHHAHIAAVLAEHACH---ERVLGAALDGTGWGDDGTAWGGEFLAADMAGY 545 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ--QNWSVLARAIE 583 E L + LPGGD AA++PWR L E Q W +L +A Sbjct: 546 ERLAHFACIPLPGGDRAAEEPWRLALWVLYGLHGERLAMHAPGFAAQLPAGWQLLMQATA 605 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASCHGVTHPVTMPRV 641 G++APL SS GR FDA AA LG YEG+AA LE A A G P + Sbjct: 606 AGVSAPLTSSAGRLFDAAAALLGVCLVNR-YEGQAAIELELRARTAQREGRILPYVLRGA 664 Query: 642 DNQL--DLATFWQQWLNWQAPVNQ-----RAWAFHDALAQGFAALMREQATMRGITTLVF 694 + D + ++ RA FH +A A ++ A G+ T Sbjct: 665 PGAMTADFLPVLNALADGAEQISAEERAGRALDFHVTMAAAVAEVLGVLAVHTGLRTAAL 724 Query: 695 SGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 +GGV N LL ++ + + +L P P DGG++ GQ A AR G Sbjct: 725 AGGVFQNALLLEQVLARIGGDYRVLLPHLAPPNDGGIAYGQAAAALARMKNGR 777 >UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5F1_GEMAT Length = 859 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 311/830 (37%), Positives = 400/830 (48%), Gaps = 99/830 (11%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQL 61 + V +R+RG VQGVGFRPFV +LA +L G+V N GDGV V L +P E FL L Sbjct: 15 ATTRVVVRLRGTVQGVGFRPFVHRLAIRLGARGEVRNVGDGVLVELEGEPGVIEQFLAAL 74 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-------------TQIVPDAAT 108 + P ARI+S+E Q F I S + PD AT Sbjct: 75 SREAPRAARIESMEVH-AEQPQGVKGFRIAGSRTHDEAMPGNGKVLAFARVAAVPPDLAT 133 Query: 109 CPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRD 168 C C E + P +RRYRYPF+NCT CGPRFTI+ +PYDR T M F +C AC +EY D Sbjct: 134 CSDCWREFHNPADRRYRYPFLNCTQCGPRFTIVIGVPYDRALTTMRRFTMCVACQREYDD 193 Query: 169 PLDRRFHAQPVACPECGPHLEW----------------VSHGEHAEQEAALQAAIAQLKM 212 P RRFHA+P AC +CGP + W V H A E AL+AA+ L+ Sbjct: 194 PTHRRFHAEPNACADCGPQVAWSVVRRADTDMREPALPVVHATDARNENALRAALTVLRA 253 Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAAR------Q 266 G IVA KGIGG+HL CDARN++AVA LR RK RP KPLAV++ L A Sbjct: 254 GGIVAAKGIGGYHLLCDARNADAVARLRLRKDRPHKPLAVLVDTLSTLRTFADVRASAVV 313 Query: 267 LLTTPAAPIVLVD--KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGN 324 L +PA PIVLV K L ++AP L+ VGVMLPA PL LL PLV TSGN Sbjct: 314 SLESPAHPIVLVPTSKGAAQPLAHNVAPGLDSVGVMLPAFPLHALL--AADGPLVCTSGN 371 Query: 325 LSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV----RESGEMLRRSRGYVPD 380 LS +P A + AL L +ADGFL HNR+IV DDSVV + +RRSRGY P Sbjct: 372 LSDEPIAWRDVDALRRLAVLADGFLTHNREIVLPCDDSVVSIGDDGHEQPVRRSRGYAPY 431 Query: 381 ALA----LPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALR 436 + LP + VL +GA+LK+T + +Q LS H+GD+ A Sbjct: 432 PIPVAASLPASIRASASVLAVGAELKSTAAWLAADQVTLSSHIGDVGSPETLEALTLATG 491 Query: 437 LMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLD 492 ++ ++ + D HP Y SS+W AR+ V HHHAH AA +AEH P Sbjct: 492 QLEAMHHGRADVIACDLHPEYHSSRWAAERARQSGATLVRVQHHHAHLAALMAEHGLP-G 550 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 ++A T DG G G +G +WGGE L + + L L GGD A +QP R L Sbjct: 551 STPILACTFDGTGWGTDGTVWGGEMLLGDCTGFTRVASLTPFPLAGGDAAVRQPLRGALG 610 Query: 553 QCLRFVPEWQNYSETASVQQQNW-----SVLARAIERGINAPLASSCGRFFDAVAAALGC 607 R + + + + ++ + +ERGI SS GRF DA A G Sbjct: 611 LLHRHGHDVSDNAIAPMLHHTELTSEARRLMIQQLERGIACVETSSMGRFLDACAVLCG- 669 Query: 608 APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ-----------------LDLATF 650 PA +SYEG+AA LE LA G ++ ++ A Sbjct: 670 GPAKVSYEGQAAILLEVLARQYPGTRMRAGYNIDVHEGPASSVNRDGVHAPRWLMNPAPM 729 Query: 651 WQQWL------------------NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 Q L W + AW HDA+A+ + G + Sbjct: 730 LQALLWDMQAEVSASRSLNRTQDAWADAIAPIAWHVHDAVARVVVDIALRVRRDHGTNHI 789 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 +GGV N+LL A L F +L + +P DGGL+LGQ +IAA Sbjct: 790 GLTGGVFQNQLLSTLTARALETDGFEVLQHRRVPCNDGGLALGQALIAAH 839 >UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Campylobacter RepID=A0RPH2_CAMFF Length = 741 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 234/759 (30%), Positives = 371/759 (48%), Gaps = 38/759 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQ 63 +++ I G VQGVGFRPF++ LA++ + G V ND GV++++ D E F ++ Sbjct: 2 KSLKIEIYGLVQGVGFRPFIYYLAKKFGIFGRVFNDSQGVKIQIYADDEACDKFCKAIFD 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLARID + +S +F I +S I+PD A C C E +RR Sbjct: 62 ELPPLARIDDFKVT--GYSFKFDDFKIIESKQALKTAPILPDFAICDECKREFYDKDDRR 119 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + +PFINCT+CGPRF+II+++PYDR T M++F +C C EY +P +RR+HAQP++C Sbjct: 120 FHHPFINCTNCGPRFSIIKSLPYDRKNTTMSSFAMCDECKNEYSNPYNRRYHAQPISCKT 179 Query: 184 CGPHLEW--VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + + + A E A++ +LK GKI+AIKGIGGFHL CDA N A+++LR Sbjct: 180 CGPKVSFKNLDGIVLANDEEAIRLCANELKSGKIIAIKGIGGFHLVCDATNQKAISSLRE 239 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK+RP KP A+M + + LT+ PI+L+ K + L ++A +L Sbjct: 240 RKNRPDKPFAIMCKDIQMASLVAYINEFEEDALTSNIKPIILLKSKEI--LPANLALNLK 297 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 ++G+ LP L LL + + P++ TS N+SG+P I E L + DG L ++RDI Sbjct: 298 KIGIFLPPTSLHLLLFEYIDFPIIATSANISGEPIIIDFESISKKLIKVCDGALDNDRDI 357 Query: 356 VQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 + DDS V + LR SRG P + F L +G++LKN F + + Sbjct: 358 LNPSDDSIAFVYQSYLAWLRTSRGIKPKII--HSKFDKKGCFLAIGSELKNQFAIYKDGL 415 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 S ++GDL + ++ L + Y+F ++V+ D HP ++ ++ + Sbjct: 416 IFSSAYIGDLKNKATFDRFLMVLDMFVRTYEFKFEFVIADKHPYFLHTKHFAKQGFTVHK 475 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH+AH + E+ V+ DG G G++ +WGGE + + E + Sbjct: 476 VQHHYAHILCVMLENDIT---DSVLGFGFDGTGYGDDSHIWGGEVFICDTKNYERVAKFD 532 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 L GGD A K + + ++ + + + +Q L + ++ GIN S Sbjct: 533 DFDLIGGDNAIKNIYYLTYSILCKYNIDAPKF--YSKFEQNQLLNLDKVMKSGINIIKTS 590 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 S GR FDA A + +SY+ +AA LE+L +++ + D + + Sbjct: 591 SLGRIFDAFACLV-LGINKVSYDAQAAMELESLYDDTIDISYDFCIN--DGIISYKEPFL 647 Query: 653 QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 + L+ V A F + +A L +V GGV N L R+ L Sbjct: 648 RALSDSPSVA--ATGFINGIANLILELAELYKK-----PVVLGGGVFQNEALLKRVILNL 700 Query: 713 ADFTLLF--PQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 ++ F P+ P D +++GQ ++L N Sbjct: 701 NKNSIFFYLPKDEPVNDSSIAMGQIYF-GLKFLGYNANN 738 >UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQ64_OPITP Length = 788 Score = 856 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 298/760 (39%), Positives = 397/760 (52%), Gaps = 40/760 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPP 67 L I G VQG+GFRPFV +LA++L + G V N+ G +R+ P+ FL++L P Sbjct: 29 LEITGTVQGIGFRPFVARLAKELRIRGWVRNNPRGAALRIAGAPDRLDEFLLRLRAELPA 88 Query: 68 LARIDSVEREPF-----IWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGE 121 +IDS+E+ P + F I S T + + PD A C CLAE+ +P + Sbjct: 89 AGKIDSLEQPPAGVRADLPPCPAAGFEIIASATTEPPTSAVTPDLAICADCLAELGSPRD 148 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPFINCTHCGPR+TI+RA+PYDRP T MA F +C C +EY DP +RR HAQP AC Sbjct: 149 RRHGYPFINCTHCGPRYTILRALPYDRPNTTMAEFVMCHDCAREYGDPRNRRHHAQPNAC 208 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGPH+ AE++ A+ AA A L G IVA+KGIGGFHL D N AVA L Sbjct: 209 SVCGPHVTLEDPPGKKLAERDEAIAAAAASLLHGNIVAVKGIGGFHLLADGTNETAVAEL 268 Query: 240 RARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHR KPLAVM P + + + LT+ AAPIVLV ++ L IAP Sbjct: 269 RRRKHREEKPLAVMFPSLAAVREMAELSEEEERQLTSAAAPIVLVRRRPGAALAVSIAPG 328 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 VG LP PL LLL PLV TSGNL+ +P N +A L IAD FL HNR Sbjct: 329 NPCVGAFLPYTPLHKLLLDACARPLVATSGNLAEEPLCTGNVEARERLGRIADLFLTHNR 388 Query: 354 DIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I + +DDSV+R + +LRR+RG+ P L LP + PP+LC+G +LK+T + Sbjct: 389 AIARPIDDSVIRVARDGPVLLRRARGFAPTPLPLPADCRCRPPLLCVGGELKSTIAVTTD 448 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 VLS H+GDL + +R + L +++++ T + V DAHP Y S+ +A + LP Sbjct: 449 TNLVLSPHIGDLESPLARAAFRHTIDLFRSLHELTFRAVGCDAHPDYASTIFAESLGLPV 508 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR--ECEHL 528 V HH AH ACL EH V+ + DG G G +G +WGGE + V+ R + Sbjct: 509 VRVQHHLAHLLACLLEHG--GGPERVLGVAWDGTGYGSDGTIWGGEFIVVDRRAHTARRV 566 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 G L LPGG+ A + PWR L P+ T + ++ G +A Sbjct: 567 GHLRPFRLPGGEAAIRAPWRTALGLLHALSPDASTALNTLPNTP-EAQQVRALLDGGRHA 625 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG--VTHPVTMPRVDN--- 643 P+ +S GR FD VAA LG +++EG+AA +EA+A P+ + + Sbjct: 626 PITTSAGRLFDGVAAMLGLR-QQVTFEGQAAMDVEAIATDAEPNITGWPMPIGTSEQTGR 684 Query: 644 -QLDLATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 +LD PV A FH LA G AAL GI +V SGG Sbjct: 685 LELDWRPALAALTRELAHTPVPTLAARFHATLAAGIAALAERV----GIEDVVLSGGCFQ 740 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 N L L F +L + LP DGG++ GQ + A Sbjct: 741 NVRLLELTTAALQAKGFRVLRHRMLPPNDGGIAAGQALGA 780 >UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroidales RepID=A6LCY2_PARD8 Length = 760 Score = 856 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 274/769 (35%), Positives = 396/769 (51%), Gaps = 43/769 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 MAKN + I+G VQGVGFRPF++++A+ L + G V N +GV + + P+ Sbjct: 1 MAKNKVYAL--IIQGLVQGVGFRPFIYRIAKDLGMKGCVENMNNGVRILVAATPDDRDLL 58 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFT-IRQS-TGGTMNTQIVPDAATCPACLAE 115 + ++ P +A I + + + I S + TQ+ PD A C C+ + Sbjct: 59 ISRIRTEHPRVAYIHRISYTSTEMDEDDFDDFTITPSHSESDEVTQVSPDIAVCADCMRD 118 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 T R YPFINCTHCGPRF+IIR +PYDR T M F +CP C+KEY + +DRRFH Sbjct: 119 -RTTQPHRIGYPFINCTHCGPRFSIIRDLPYDRSQTTMGGFLMCPDCEKEYTNVIDRRFH 177 Query: 176 AQPVACPECGPHLEWVSHGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 AQPVAC CGP + E + E L+ L G+++A KGIGG+HL CDA N Sbjct: 178 AQPVACNHCGPTYYATYNEETYIDYETLLKLTSRLLLGGEVIAAKGIGGYHLICDASNER 237 Query: 235 AVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCD 288 AVA LR K R KP AVM + L + L + PIVL+ ++ L Sbjct: 238 AVARLREIKQRDTKPFAVMFRDLEHLQVYTATEPMEERCLVSWRRPIVLLRQR--SRLAS 295 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADG 347 I P ++ +G ML P+ + P LVMTSGNLS P AI+ E A A L G Sbjct: 296 GINPGMHTLGCMLSYMPIHYDWFARTGIPALVMTSGNLSDLPIAITPEDAEAQLAGKVAI 355 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L HNR I R+DDSV++ G ++RRSRGYVP+ NV ++ GA+ NT Sbjct: 356 LLHHNRPIHNRVDDSVLQVCGGQPCLIRRSRGYVPEPFFTDT---NVEGIMAFGAEKVNT 412 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 F L +GE + SQ++GDL + + E++ ++++ F Q +V D HP Y+SSQ A Sbjct: 413 FALGKGETILQSQYIGDLKNWETFRFYTESMERFRHLFRFNLQRLVCDLHPDYLSSQEAE 472 Query: 465 E----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 ++LP V HHHAHAAAC+ EH V+A+ +DG G+G++G +WGGE Sbjct: 473 RISKSLSLPLLKVQHHHAHAAACMLEHGL---NEPVLAIVMDGTGLGDDGKVWGGEFFFC 529 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS-----VQQQNW 575 + + L V LPGGD AA++PWR ++A + + + + + + Sbjct: 530 DRAKYRRLSHFEYVPLPGGDKAAEEPWRMVVAYLWHYFKDEPSGIPYPADFVERIGTERI 589 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 ++L R +E+G+N P SS GR FDAVA+ LG + S++ EA LE A + Sbjct: 590 AMLERMMEKGVNTPYTSSAGRLFDAVASLLGICDVS-SHQAEAPVLLEQAAM-GERNAYA 647 Query: 636 VTMPRVDNQLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + ++ + ++ L+ + PV+ + FH LA F R T + Sbjct: 648 YPVSAEGEEISFYSLFEALLHDKTNEVPVSLISARFHTTLASLFVQKARLLIKRTKATQV 707 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 V SGG N+LL + A + P +P DGG+++GQ IA+ Sbjct: 708 VISGGCFQNKLLTESMRRQFIMAGVPVYIPSRIPCNDGGIAVGQLTIAS 756 >UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Francisella philomiragia RepID=B0TWC6_FRAP2 Length = 751 Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats. Identities = 255/768 (33%), Positives = 384/768 (50%), Gaps = 54/768 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCP 66 ++ + G VQGVGFRPF++ LA+ +NL G V N +GVE+ L+ D ++F+ + P Sbjct: 7 KILVNGIVQGVGFRPFIYCLAKDMNLCGSVQNTPNGVEILLQCDESTVDSFINDMEAKLP 66 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA I+++++ + T+F+I ++ G+ T+I D A C CL ++ P R Y Y Sbjct: 67 PLASIETIQKTIYQTESEFTDFSILETQQGSSATKIPADTAICDLCLDDIFNPQSRYYLY 126 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P+ +CTHCGPRF+ I+ +PYDR T FPLC C Y +PLDR +HAQ VAC CGP Sbjct: 127 PYTSCTHCGPRFSTIQNLPYDRDKTTYKDFPLCDGCHDSYTNPLDRHYHAQTVACSSCGP 186 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + ++ GKI+AIK GF L DA N+ AV LR RKHRP Sbjct: 187 KLS-----------HSFAEISQAIRAGKIIAIKSQNGFKLVVDATNTEAVEKLRRRKHRP 235 Query: 247 AKPLAVMLPVADGLPD-------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 KP A+M + + +LL T PIVL+ + + IAP +N++G Sbjct: 236 NKPFALMALNTQSIQEHFAEVTTQQDELLNTTIRPIVLLKRHSTSTISSSIAPHINQLGF 295 Query: 300 MLPANPLQHLLL--------------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 MLP ++L + L++TS N+SG+ +N++A L+ IA Sbjct: 296 MLPTTGSDYILFYHLLNQPNSSSWLNEAYNLALIVTSANISGESIIANNDEAHEKLKDIA 355 Query: 346 DGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D + NRDI + DDSV V + +RRSRG VP ++ L + +P +L G LK Sbjct: 356 DLIVTDNRDIAIKSDDSVFHTVIDKNLPIRRSRGLVPQSIQLS---ETLPNILATGTFLK 412 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFC ++ QA +SQH+GD++ + ++L Q ++ + D HP ++ + Sbjct: 413 NTFCFIKDNQAFVSQHIGDMNSQANIEFFEQSLEHFQKMFGLKFDGIACDLHPDIYTTYF 472 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A++ +LP + HH AH AA + EH G I L LDG G+GE+G GGE + Sbjct: 473 AQKFDLPIYQIQHHQAHLAAVITEHNLQ---GHAIGLVLDGFGLGEDGIARGGELYHCDI 529 Query: 523 R--ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 E +G L + GGD AK+PWR LA C ++ E N+ + + +L Sbjct: 530 DNLEFNRIGELDPIEYIGGDKVAKEPWRMALAVCHKYDLEIPNHLKEFPQAESLIKLLQN 589 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 + +S GR FDAV++ L +YE +AA LE+LA + + Sbjct: 590 ---DSLPKGKTTSMGRLFDAVSSLLNVCHIN-TYEAQAAIELESLAD-ISNIQYDTKSVS 644 Query: 641 VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 L+L + + ++ + +H LA A + A R I ++ SGG Sbjct: 645 FKTNLNLKKLLKSIIKC-DNISVASNLWHSTLAYALAQWISNSAQPRNIKNIILSGGCFQ 703 Query: 701 NRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 N+LL L DF + + +P DGG+SLGQ + A ++ GE Sbjct: 704 NKLLLTETYRQLKEMDFNIYISEKVPLNDGGVSLGQAWLGAKKYKKGE 751 >UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 Tax=Bacteria RepID=Q2JBM2_FRASC Length = 816 Score = 855 bits (2209), Expect = 0.0, Method: Composition-based stats. Identities = 311/783 (39%), Positives = 399/783 (50%), Gaps = 54/783 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQ 63 + ++G VQGVGFRPFV A +L L G V ND GV + P E F +L Sbjct: 33 ARRRFVVQGLVQGVGFRPFVHAAATELALTGWVRNDTGGVVAEVEGTPGAVEDFARRLRC 92 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLA ++ V + F I +S T PD ATCP CL E+ P +R Sbjct: 93 DVPPLAMVERVVTTELPPCGG-SGFAIVRSRPAAGGRTAAAPDVATCPDCLRELADPADR 151 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYR+PFI CT+CGPRFTII +PYDRP T MA F +CP C++EY DP DRRFHAQP+ACP Sbjct: 152 RYRHPFITCTNCGPRFTIITDLPYDRPATTMARFAMCPVCEREYSDPADRRFHAQPIACP 211 Query: 183 ECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP LE+VS G E AL AA L G ++A+KG+GG+HLAC A + AV TLR Sbjct: 212 ACGPRLEFVSPLGAPRTGEDALAAARRLLADGGVLAVKGVGGYHLACVATDPTAVTTLRR 271 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAPD 293 RK R KP AVM+ + + LLT PA PIVLV ++ P L D +APD Sbjct: 272 RKRRGGKPFAVMVHDLAAARALAHVDEREAALLTDPARPIVLVRRRRDGRPALADSVAPD 331 Query: 294 LNEVGVMLPANPLQHLLLQELQC--------------PLVMTSGNLSGKPPAISNEQALA 339 ++G++LP P+ HLLL PLVMTSGNL G+P A + AL Sbjct: 332 NPDLGLLLPYTPVHHLLLGLPGEPVPLHRTVGTAGWPPLVMTSGNLGGEPIAAEDTDALR 391 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLC 396 L + DG+L H+R I DDSVVR + +RRSRGY P + LP VPP L Sbjct: 392 RLAPLVDGWLRHDRPIRVPCDDSVVRVVDGAPSPVRRSRGYAPLPVPLPF---EVPPTLA 448 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +GADLKNT L G A LS H+GD+ D + A R ++++ TP+ +V DAHPG Sbjct: 449 VGADLKNTCGLGAGRSAWLSGHIGDMDDLATLRAFDAAERHLEHLTGVTPRQLVTDAHPG 508 Query: 457 YVSSQWAREM--NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWG 514 Y S QWA P +TV HHHAH AA +AEH V+ DG G G + A+WG Sbjct: 509 YRSRQWAVRHAAGRPIRTVQHHHAHVAALMAEHGLD-GTRPVVGFAFDGTGYGPDRAVWG 567 Query: 515 GECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQ 573 GE L +YR L V L GGD A ++P R LA W + Q Sbjct: 568 GEVLIADYRGFRRFAHLGYVPLAGGDAAVRRPCRMALAHLHAAGVRWDPTLPPVVACPQP 627 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 VL + G+ SS GR FDAV++ LG + +E +AA LEA A + G Sbjct: 628 ERRVLTHQLASGLGCVPTSSMGRLFDAVSSLLGIRHE-VDFEAQAAIELEARARTAAGGG 686 Query: 634 HPVTMPRV----------DNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALM 680 +D A + L+ V+ A FH A+ L Sbjct: 687 ADDRERHAFALRGQGLGRPLIIDPAPVIRAMVRDLSAGLAVDIAAVRFHTAVVAMIVDLA 746 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 R G+ + +GGV N +L + L FT+L +P DGG++LGQ ++A Sbjct: 747 RRARGEVGLDLVGLTGGVFQNAVLTTAASRALHAGGFTVLRHARVPPNDGGIALGQLLVA 806 Query: 739 AAR 741 AAR Sbjct: 807 AAR 809 >UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Aeromonas RepID=A0KL72_AERHH Length = 812 Score = 854 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 288/785 (36%), Positives = 389/785 (49%), Gaps = 57/785 (7%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 + I G VQGVGFRPFV+ LA + + G V ND +GV + PE F +L + Sbjct: 19 RREFHIDGIVQGVGFRPFVYGLALRHGIAGYVLNDANGVTIGAEGSPEQLAAFARELREL 78 Query: 65 CPPLARIDSVEREPFIWSQLPT-------EFTIRQSTG-GTMNTQIVPDAATCPACLAEM 116 PPL+RID + P +F I+ S + I PD C AC ++ Sbjct: 79 APPLSRIDHFSDRELPLAHGPDYDGHFHGQFRIKASQQQSSATVAISPDQGMCEACANDV 138 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +R +RYPF NCTHCGPR+TIIR +PYDRP T MA F +CP C Y +PLDRR+HA Sbjct: 139 ANPNDRHHRYPFTNCTHCGPRYTIIRRLPYDRPHTAMAGFAMCPRCAAAYENPLDRRYHA 198 Query: 177 QPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 QPV+CPECGPHL W S AE+E ALQAA + L+ G ++A+KG+GG+HL CDARN Sbjct: 199 QPVSCPECGPHLSWRSGRGDALAEREDALQAAASALQAGALIAVKGMGGYHLVCDARNKQ 258 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVP---- 284 +VA LR K R KPLAVM+ +A QLL + A PI L+ K+ Sbjct: 259 SVARLRTLKRRERKPLAVMMGSLAEAKLHVTGCEAEWQLLASQARPITLLRKRKNDDRPS 318 Query: 285 -------ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQA 337 L + IAP + +GVMLP PL LLL PLV TS N G P I E Sbjct: 319 KSQLTTAPLAEGIAPGIPYLGVMLPYTPLHQLLLDACAIPLVATSANGRGSPILIECEAV 378 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPV 394 + +L DG L HNR I+ DDS+V+ +G + LR +RGY P +L P+ Sbjct: 379 IRELGSEIDGILDHNRPILHPCDDSLVQWAGRRRQTLRLARGYAPCTPSLQEAVN--LPL 436 Query: 395 LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAH 454 L +GA KN L G Q + S ++GDL +Q + + L +++YD P+ +V D H Sbjct: 437 LAVGAQQKNQLALAFGRQRIYSPYIGDLHSLPMQSHFEQTLATFRDLYDLKPELLVSDRH 496 Query: 455 PGYVSSQWAR----EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENG 510 PGY+S QWA+ + V HHHAH +AEH G V+ + DG G+G++G Sbjct: 497 PGYLSHQWAKSYCRDQGAIHLEVQHHHAHLLGVMAEHDIT---GPVLGVAFDGTGLGDDG 553 Query: 511 ALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSE 566 LWGGE L + + + L L GG+ A ++P R LL + + Sbjct: 554 TLWGGELLLADVKGFTRVAHLKPFKLIGGEAAIREPVRQLLGLLFESYVVDETSALDIPA 613 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 + + L + + G NAP SS GR FDAVAA LG T YEGEA LEA A Sbjct: 614 IKQLPAERIRNLHQLWQLGRNAPYTSSIGRLFDAVAALLGVID-TPDYEGEAGLLLEAAA 672 Query: 627 ASCHGVTHPVTMPRVDN-------QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAAL 679 P + + Q+ A ++ + + A + + L Sbjct: 673 LQLAPDEVPFPLAFDLSQSAEGPLQIQWAELINTLVSERRKGSSTASLA-AGFIRAISNL 731 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 + A + GGV NR+L +L L A +L ++LP DGG++ GQ Sbjct: 732 VIALAERFPGYPVALGGGVFQNRVLMDQLVPALEAAGRQVLTSETLPLNDGGIAAGQLWF 791 Query: 738 AAARW 742 A Sbjct: 792 AIHHL 796 >UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyrus kandleri RepID=Q8TXL4_METKA Length = 762 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 285/762 (37%), Positives = 387/762 (50%), Gaps = 42/762 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 ++R+RG VQGVGFRPFV++L ++ L G V N G VE+ ++ + E + +L + P Sbjct: 5 KIRVRGIVQGVGFRPFVYRLCTEMELDGHVRNLGSEVEIVVKATCDELEELIRRLKEEHP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLAR+ V E P + + QI PDA C CL E+ P RRY Y Sbjct: 65 PLARVREVHAEETEEDVGPGFRIVESEESEDVELQIPPDAPVCEECLEEIFDPKSRRYLY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT+CGPRFTII +PYDR T M FPLC C +E+ DP DRR+HAQ V CP CGP Sbjct: 125 PFTGCTNCGPRFTIIEGIPYDRENTTMVDFPLCEECRREFEDPEDRRYHAQVVCCPRCGP 184 Query: 187 HLEWVSHG---EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 + E+ A++ A ++ GKIVAIKGIGGFHLAC VA LR R Sbjct: 185 RYRLLDADGEVVEGEELEAIREACELIEEGKIVAIKGIGGFHLACKTTEDEPVAKLRERL 244 Query: 244 HRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP +P AVM D + A LLT P PIV++ KK L + +AP L+ V Sbjct: 245 GRPQQPFAVMSGSLDDVRTFAEVDGTAEDLLTGPVRPIVVLPKKEPFPLSELVAPGLHTV 304 Query: 298 GVMLPANPLQHLLLQEL--QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 GVMLP L H++ + + +VMTS N G+P AI N AL L+GIAD +L+H+R I Sbjct: 305 GVMLPYTGLHHIMFERFLDEPAIVMTSANPPGEPMAIRNSDALRHLRGIADYYLVHDRRI 364 Query: 356 VQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 R DDSVVR LRRSRGYVP+ + L ++ V+ +G +L T C++ + Sbjct: 365 AARCDDSVVRVLDGRPRSLRRSRGYVPEPIELEWAPDDL-TVVAVGPELDVTACVLHRGK 423 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDF---TPQYVVHDAHPGYVSS----QWARE 465 A +QH+G+ S +E + + V D HP + ++ +WA E Sbjct: 424 AYPTQHIGNTSRAQTLDFLQETVERFLRLLRLDWNDVDAVACDLHPSFATTGLARRWAEE 483 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +L V HHHAHA ACLAEH IA +DG G G++G+ WGGE L V+ E Sbjct: 484 HDLELVRVQHHHAHALACLAEHGLDPAEEPAIAAAMDGYGYGDDGSAWGGEILYVDGNEY 543 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 E +G L V++PGGD A +P R A + E + + W + ER Sbjct: 544 ERIGHLEPVSMPGGDAATYRPLRMTAAHLHAAGWSEEEIREFLLRRLEEWPHALKHGERE 603 Query: 586 I---------NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 + +S GRF DAV+AALG +YEGE A LEA+A P Sbjct: 604 VEVILHQIEHPTIETTSAGRFLDAVSAALGVCHER-TYEGEPAMKLEAVAVRVDHAPEP- 661 Query: 637 TMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + + + +++ + + A H AL +GFA ++ E + +G Sbjct: 662 DVDVRNGSVRVSSVVARAAETGDL--RYALTAHHALIEGFAEVIDEHRDG---EPVAITG 716 Query: 697 GVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 GV +N L+ L LL +PAGDGG+SLGQ V A Sbjct: 717 GVFNNELITRG-FRELYGADLLEHHEVPAGDGGVSLGQVVAA 757 >UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria RepID=A5EUI8_BRASB Length = 755 Score = 852 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 285/757 (37%), Positives = 396/757 (52%), Gaps = 34/757 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 G + + G+VQGVGFRPFV +LA+QL L G V N V++ +R D + F + L Sbjct: 9 ALEGRSIEVVGRVQGVGFRPFVQRLAKQLGLAGWVRNYSGHVQILVRGDRGSLDQFAMDL 68 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 P AR +E ++ +F I +S +GG ++ PD + C CLAE++ P Sbjct: 69 IAKAPAFARP-QIESIVPTYTDEFDDFLIVESGSGGLSAVELAPDQSICEDCLAEIHDPT 127 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRYRYPF NCT CGPR+TIIR +PYDR T MA F LC C EY DP DRRFHA+P+A Sbjct: 128 ARRYRYPFANCTQCGPRYTIIRKLPYDRANTTMADFALCRRCRGEYADPNDRRFHAEPIA 187 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP+CGP L +V+ E + AL AA+ L+ G VA+KGIGG+HL CDA +AVA Sbjct: 188 CPDCGPRLRFVAADGDLAVENDDALAAAVDLLRRGLTVAVKGIGGYHLLCDATRESAVAR 247 Query: 239 LRARKHRPAKPLAVMLPV--------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR K+RP KP AVM+P + L P+ PIVLV K+ L + Sbjct: 248 LRQSKNRPHKPFAVMVPTDDKLAWRRLAAIDVVEEAALLDPSRPIVLVRKRPESPLAPAV 307 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 A + VG+MLP +PL HLLL + P+V TS N+SG+P L DGFL Sbjct: 308 ASGMAYVGLMLPYSPLHHLLLDAFEKPVVATSANISGEPVLTDAADVERRLARCCDGFLH 367 Query: 351 HNRDIVQRMDDSVVRE-SGEM--LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I + DD VV+ +G+M LR RG P + P P+L G LK T L Sbjct: 368 HDRAIERPADDPVVQVIAGQMKSLRLGRGTAPLTIKTPYLL--PEPILACGGQLKTTVAL 425 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 G++ V+S H+GD+ + + +A +Q++Y +++VHDAHP + S++W Sbjct: 426 AFGDRIVISPHIGDMGNMRSLRVFEQAANGLQSLYGTVARHIVHDAHPDFTSTRWTSRQR 485 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 L + + HH AHA+A EH ++ DG+G G++G WGGE L + Sbjct: 486 LKSAAIQHHLAHASALAGEHGRE---APMLVFAWDGLGFGQDGTSWGGETLMGSPGRWRR 542 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 +G + + L GGD A +PWR+ + C +W N+ + + + R E Sbjct: 543 VGTIRPIRLVGGDRVALEPWRSACSVCWEAGIDWGNH-------RPEFVDVRRVWETKSG 595 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH-PVTMPRVDNQLD 646 S+ GR FDA AA L +SY+G A +E++A S + PV +D Sbjct: 596 TLETSAVGRLFDAAAALL-GLAEAVSYDGHAPALVESIAGSLPDASPLPVLEAGDLRIMD 654 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 L + PV++RA AFH ALA A R + ++ G ++ +GGV NRLL Sbjct: 655 WTPLVPLLLEAEVPVSRRAAAFHAALAATILADARYRRSVDGTNSVGLTGGVFQNRLLTE 714 Query: 707 RLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 R L F +L + +P DGGLS GQ V AAR Sbjct: 715 RAVALLKCDGFEILLHERVPPNDGGLSFGQAVEFAAR 751 >UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMW1_9PROT Length = 733 Score = 852 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 255/763 (33%), Positives = 384/763 (50%), Gaps = 64/763 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETF 57 M+ T+ +I G+VQGVGFRPF++++A +LN++G V N GV++ L + E F Sbjct: 1 MSYFTTKRFGFKIFGQVQGVGFRPFIYKIATELNINGFVKNSEKGVDLELEGEILQIEEF 60 Query: 58 LVQL-YQHCPPLARIDSVEREPFIWSQLPTEFTIRQST----GGTMNTQIVPDAATCPAC 112 + L PPLARID +++ F I ST G+ ++PD A C C Sbjct: 61 MNVLNSDRLPPLARIDKIQQIEIKPLYREQ-FEIIHSTLSVNNGSKVALVIPDTAICEEC 119 Query: 113 LAEMNTPGE-RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD 171 L + ++P + + Y Y CT+CGPR++II+ +PYDR T M+ F +C +C++EY +PL+ Sbjct: 120 LFDTDSPYKLKYYDYFATTCTNCGPRYSIIQTVPYDRENTSMSKFKMCTSCEEEYTNPLN 179 Query: 172 RRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDAR 231 RR+HAQP++C +CGP L ++ +K GKIVA+KG+GGFH+ CDA Sbjct: 180 RRYHAQPISCNDCGPTLT-----------DTIEKTAEFIKNGKIVAMKGLGGFHIVCDAT 228 Query: 232 NSNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPE 285 N + LR K+RP KPLA+M + + ++LL + APIV+++K + Sbjct: 229 NDEVIERLRVHKNRPTKPLAIMCKDLEQVKLLASASTKEQELLASKEAPIVILNKALDAK 288 Query: 286 L--CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 + D +AP+++ +G LP L HLL ++L+ P+V TS NL +P I E L Sbjct: 289 IKISDKVAPNIDRIGCFLPYTALHHLLFKQLKNPIVATSANLGSEPIIIKAEDIKEKL-P 347 Query: 344 IADGFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 D L +RDIV +DDS VV + +MLR SRG+ P + L GFK+ +L +GA+ Sbjct: 348 FVDFVLDFDRDIVNGVDDSLVQVVNGNTQMLRLSRGFAPKVIKL--GFKSEKKILAVGAN 405 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KN V + +LS H+GDL + + ++ YDF P +VHD HP Y ++ Sbjct: 406 AKNAIAFVIEDNIILSPHIGDLGSLKAFEFFERTIETFKSFYDFEPDVIVHDMHPNYETT 465 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 +WA+ V HH AH AC AE + GD + + DG G G +G LWGGE Sbjct: 466 KWAKAQGKELVEVQHHLAHIYACKAEFEL---SGDYLGFSFDGTGYGSDGQLWGGEIFVG 522 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS----VQQQNWS 576 + R+ ++ L GG+ A K+P R L+ + S A ++ Sbjct: 523 DVRKY----SFKSLKLLGGEKAIKEPRRVALSMLFDKYSLDEVLSLDAEVVKSFKESEIK 578 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 +L ++ + +NAPL+SS GR FDA+A+ SYEGEA E VT + Sbjct: 579 ILHQSHTKNLNAPLSSSVGRLFDAMASFSNLLQF-QSYEGEAGLICEE--NYKQDVTQTL 635 Query: 637 TMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 VD +D+ + F + LAQ + + + ++ SG Sbjct: 636 EYKIVDGIIDIEFDFFD--------KNIVSKFINTLAQIVLDISKIEKME-----VILSG 682 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 GV N+ L A L AD + DGG++LGQ Sbjct: 683 GVFQNKTLLELAASKLKDADIKYFYQSETAINDGGIALGQAYF 725 >UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDY6_9ACTO Length = 764 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 293/759 (38%), Positives = 383/759 (50%), Gaps = 30/759 (3%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 V++ + G VQGVGFRPFV++LA + L+G V N G V + R F+ +L Sbjct: 9 VRAVRVTVSGLVQGVGFRPFVYRLANEHRLNGHVANTGGQVAITARGPAAALAEFIARLS 68 Query: 63 QHCPPLARIDSVEREPFIWSQLPT-EFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 P + +++V + P F I S G PD ATC AC E+ P Sbjct: 69 TEAPVQSHVENVAVADLEPTPGPGAGFRIVNSARSGDPRRYPPPDLATCAACARELFDPD 128 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPFINCT CGPR +II +PYDR T M F +C C EY DP DRRFHA+P+A Sbjct: 129 DRRYRYPFINCTACGPRISIIDDLPYDRARTTMRTFHMCDRCRGEYLDPGDRRFHAEPIA 188 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C +CGP L W G EAAL AIA L+ G ++A+KG+GG+ L DA + AV LR Sbjct: 189 CADCGPRLTWWGDG-IGHGEAALSQAIAVLETGGLIAMKGVGGYQLVTDAGDDTAVRRLR 247 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 K+RP KPLAVM+ D L +LLT PAAPIV+ ++ L +AP L Sbjct: 248 HVKNRPGKPLAVMVGTLDRARRLADLDTDEAKLLTAPAAPIVVCHSPHLETLSSLVAPRL 307 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + VGV LP +PL HLLL L PLV+TSGNL G+P I +E A L + DG L H+R Sbjct: 308 SHVGVFLPYSPLHHLLLAALDRPLVVTSGNLGGEPIIIGDEAARDRLGPMVDGVLGHDRP 367 Query: 355 IVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I +R DDSVVR LRR+RGY P LP +L GA K+ + + Sbjct: 368 IRERHDDSVVRVVDGETLTLRRARGYAPSPSRLPIP--TDRTILAAGAQSKSALAVTGDD 425 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 + +L +LGDL + + + ++ P + HD H GY S+++AR+ L Sbjct: 426 RVILGPYLGDLDSAEAMDGYATGVDRLCGMHAVQPNLIAHDLHDGYASTRFARDSGLDRV 485 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH A AE I + DG+GMG++G LWGGE + +YR+ LG Sbjct: 486 GVQHHHAHVVATAAERGVD---EPFIGVAYDGLGMGDDGTLWGGEIMLADYRDFRRLGRF 542 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRF----VPEWQNYSETASVQQQNWSVLARAIERGIN 587 LPGG A + P R L ++ + + R IERG+N Sbjct: 543 GYAPLPGGAAAIRNPARMALGYRYGAEDLGGGTFRAPELEKRLGPAQTDTIRRMIERGVN 602 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS-CHGVTHPVTMPRVDN--Q 644 P ASS GR FDAVAA LG T SYEGEAA LEA P + R D Sbjct: 603 CPKASSAGRLFDAVAALLGITD-TSSYEGEAAVLLEAACEGVADAFPLPWRLARRDGIAV 661 Query: 645 LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 D + + A FH + + AL+R+ A T+ GGV NR L Sbjct: 662 YDPIPTLRAITETDEATSLTAARFHTTIVEVTVALVRDAARHGYPKTVCLGGGVFQNRRL 721 Query: 705 RARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + L FT+ + +P DGG++ GQ VIAAAR Sbjct: 722 VRGVREALGQEGFTVHISRDIPVNDGGIAYGQAVIAAAR 760 >UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobacteria RepID=HYPF_AZOCH Length = 776 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 310/772 (40%), Positives = 407/772 (52%), Gaps = 45/772 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G VCN G+GV + L+ P F Sbjct: 1 MNEAAKAGVRLLLRGRVQGVGMRPGVHRLATSLGLAGAVCNTGEGVRIDLQGPPAALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEM 116 +L PPLAR+D+++RE F I S P DAA CPACL E+ Sbjct: 61 ERRLPAELPPLARLDALQRENLPAGAHFAGFAIVPSRDEAGGALAPPPDAAVCPACLEEL 120 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C EY DP DRRFHA Sbjct: 121 FDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRAQTSLAGFALCPDCRHEYEDPADRRFHA 180 Query: 177 QPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 QP+ACP CGP L + ++ A+A L+ G+IVA++G+GGFHLACDARN+ AV Sbjct: 181 QPIACPACGPRLWCEDAAGNRLPGEPVELALATLRRGEIVALRGVGGFHLACDARNAGAV 240 Query: 237 ATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPE--LCD 288 A LR RK RPAKP A+M L L + L+ PAAP+VL+ ++ + L Sbjct: 241 ALLRRRKRRPAKPFALMAANPASLEALVELNETGLNELSAPAAPVVLLRRRPAADGLLAA 300 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQEL--------------QCPLVMTSGNLSGKPPAISN 334 ++APDL +GVMLP +PL LL E LVMTS NLSG+P N Sbjct: 301 EVAPDLAWLGVMLPHSPLHWLLFHEAAGRPAGTAWTAAPQDLVLVMTSANLSGEPLITGN 360 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNV 391 +A L GI D +L+H+R+I+ R+DDS+V G ++R RG P + L ++ Sbjct: 361 LEAREKLAGITDLWLLHDREILNRVDDSLVNALGRAPVVIRSGRGLAPQEIRLA---RSG 417 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P VL LG LKN CL +G++A LS H+GDL + + P+ + Sbjct: 418 PSVLALGGQLKNAICLTQGDRAWLSPHIGDLHSADACRSLERTVAQFGELLGVRPERIAC 477 Query: 452 DAHPGYVSSQWARE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP + +S++ARE LP V HHHAH AA LAEH V+ L LDG G+G Sbjct: 478 DLHPDFFASRFAREHAERHGLPLYPVQHHHAHIAAVLAEHGL---AEPVLGLALDGFGLG 534 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G L GGE L+V C LG L + LPGGD AA++PWR + T Sbjct: 535 ADGRLRGGELLKVAVDGCAWLGELNPLPLPGGDQAAREPWRMAAGALHALGRGGE--IAT 592 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 + + +AR +ERG N P +SS GR FDA A LG YE EAA LE+ Sbjct: 593 RFAAEPGSAAIARMLERGFNCPPSSSAGRLFDAAAGLLGLG-ERQRYEAEAALRLESRIG 651 Query: 628 SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 S P+ DN+LDL+ + + A FH L A + A Sbjct: 652 SLPEAVPPLWRIGDDNRLDLSPLLARLADTH-DSRVGAELFHAVLIAALTAWVVRAAAAT 710 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 G+ + GG N +LR L L A L P+ P DGGL+LGQ + Sbjct: 711 GLRRIALGGGCFLNTVLRDGLCTRLQAAGLEPLLPRRAPVNDGGLALGQAWV 762 >UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN41_9GAMM Length = 782 Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 297/769 (38%), Positives = 401/769 (52%), Gaps = 45/769 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ--- 63 Q+ I G+VQGVGFRPFV+ LA +L + G V N +GV + + L Sbjct: 4 YAKQIEIHGQVQGVGFRPFVFNLANRLGIVGHVANGPEGVSIFAQGSSSQLTDLLESLQT 63 Query: 64 --HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 P +A++ S+ + F I +S G ++ + PDAA C CL E+ P + Sbjct: 64 AHEQPTMAKVHSLVATHAEAVRGLDTFEIVKSAEGEVDLAVTPDAAVCQDCLEELFDPND 123 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPFINCT+CGPR+++I+++PYDR T MA F LC CD+EY+ P +RRFHAQP AC Sbjct: 124 RRYLYPFINCTNCGPRYSLIKSLPYDRANTTMAPFTLCSPCDQEYKHPENRRFHAQPTAC 183 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L++ + AA+A ++ GKIVAIKGIGGFHL CDA+N AV LR Sbjct: 184 ASCGPSLKFRGVDGK-TDPDPIGAALALMQQGKIVAIKGIGGFHLVCDAQNPEAVQRLRD 242 Query: 242 RKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK RP KP AVM L L A + L API L K L D +AP LN Sbjct: 243 RKQRPEKPFAVMGANLESLRSIAELSRAREERLKGHDAPICLCPK-VEDALPDVVAPGLN 301 Query: 296 EVGVMLPANPLQHLLLQE-LQCP-------------LVMTSGNLSGKPPAISNEQALADL 341 +G+MLP P+ +LL Q P LVMTS NLSG P +E+AL L Sbjct: 302 WLGIMLPHTPIHYLLFHRAAQQPTGTAWLKEQQTLTLVMTSANLSGNPLITQDEEALKQL 361 Query: 342 QGIADGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKN-VPPVLCL 397 IADGFL+HNR I R DDSV V ++R RG P + LP K VL + Sbjct: 362 AHIADGFLLHNRAIETRCDDSVISMVSSQASIVRSGRGLAPTRVKLPDSLKGLGKSVLAV 421 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA KNT CL +G+ A +SQ++GDL + E + + ++ D P VV D HP + Sbjct: 422 GAFFKNTICLTKGDSAYVSQYIGDLDNPECCRNLSETVAHLCSLLDIRPDLVVADLHPDF 481 Query: 458 VSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALW 513 SS++ARE +P V HHHAH AA + EH+ GD++ + LDG+G+G++G LW Sbjct: 482 YSSRFAREYAQANQIPLMQVQHHHAHVAAVVCEHEID---GDLLGVALDGLGLGDDGQLW 538 Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ 573 GGE L+V+ E + + +PGGD AA++PWR A E + + + Sbjct: 539 GGELLKVSGHRSERIAHFSKLKMPGGDRAAREPWRIASAALHELNIESEQVIHLK--ENE 596 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGV 632 ++V+ + +E+ +N P SS GR FDAVAA L YE AA LE+ A Sbjct: 597 GYAVVQQLLEKNLNCPETSSAGRLFDAVAALLDI-KQRSDYEAHAAMLLESAAWQYLKSN 655 Query: 633 THPVTMPRVDNQLDLATFW--QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 P P + + + W Q L A FH L G + + + +T Sbjct: 656 PWPQESPLLKTEGNELVIWPLLQRLTECEDKGYAAALFHRQLVDGLVSWVTQAGERYNLT 715 Query: 691 TLVFSGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIA 738 T+ +GG N+LL + L LA+ +L Q LP DG +SLGQ IA Sbjct: 716 TVALAGGCFLNQLLLSELQAVLAEQMQVLVAQKLPCNDGAISLGQAHIA 764 >UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D517_LARHH Length = 794 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 293/771 (38%), Positives = 403/771 (52%), Gaps = 45/771 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 Q +RG VQGVGFRPFVWQLA++L + G + N G+GVE+ + P F L++ P Sbjct: 25 QWLLRGLVQGVGFRPFVWQLARRLGIQGQIRNTGEGVEILAQGQPARLAAFERALHEERP 84 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA + R+ +F+I S I PD ATCP CL E+ TP +RR+RY Sbjct: 85 PLAEFELTARQSLPADPALGDFSIGSSQESGHGATIPPDIATCPECLRELFTPADRRHRY 144 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCTHCGPR+TI R +PYDR T MAAF LCP C EY DP RRFHA+P+ACP CGP Sbjct: 145 PFINCTHCGPRYTITRQLPYDRAQTSMAAFGLCPLCQHEYLDPSSRRFHAEPIACPVCGP 204 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + L+MG+ VAIKG+GGFHLAC+AR++ AVA LR KHRP Sbjct: 205 QLRLTDRFAVPLKGDPVTGTLQFLRMGRCVAIKGLGGFHLACNARSAEAVARLRMLKHRP 264 Query: 247 AKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKK-YVPELCDDIAPDLNEVGV 299 ++PLAVM + + LL +P PIVL+ K+ + IAP +N VGV Sbjct: 265 SRPLAVMALNLASVETFCHVSPEEAALLQSPKRPIVLLQKRAEADQYLPGIAPGMNTVGV 324 Query: 300 MLPANPLQHLLLQE--------------LQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 MLP P+ L+ E VMTS NLSG+P N+ A L +A Sbjct: 325 MLPYTPIHWLMFHESLRRPAGLDWMEAPCADVWVMTSANLSGEPIVTDNDDARHRLNTVA 384 Query: 346 DGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D FLIHNR + R DDS+ + +LRR+RG+ P LAL + VL +G K Sbjct: 385 DAFLIHNRQVAARCDDSLMMMIDHEPHLLRRARGFAPAPLALRH---DGATVLAVGGPDK 441 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NT L+RG QA++S H+G L A+R ++ + P + D P +SQ Sbjct: 442 NTVTLLRGTQALVSPHIGGLDHPLTCETHNSAIRHLERWANAEPGCIACDLDPDNHASQH 501 Query: 463 AREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 A ++ LP + HHA +A LAEH + V+ L +DG G G +G WGGE L Sbjct: 502 AEQLAGLRQLPLLRIQRHHALVSAVLAEHDVDV---PVLGLVMDGGGTGADGNEWGGELL 558 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 RV+ E L LP + LPGG+ A+++PWR +R + + ++ ++ L Sbjct: 559 RVHGVSMERLAHLPHIPLPGGERASREPWRVAAGWLIRNG--LGDEAARRYGREPSFVEL 616 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 + + + P +SS R+FDA+A+ G + S+ EA LEALA + + Sbjct: 617 SEQVTHQLRCPDSSSSSRWFDAIASLAGLC-SRQSFSSEARLRLEALARPVAPLAGGWRL 675 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + QLD + L + A +H + A A + A + I +V +G Sbjct: 676 D-DNGQLDWSPVVHHLLTL-TDAEEIASLWHASCAAAVAEWVIRHARQQQIDHVVLAGSS 733 Query: 699 IHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 NR+L+ L +L A TLL + LP+G G LSLGQ +A +WLAG Sbjct: 734 CSNRVLQQALHRHLLQAGLTLLESRQLPSGAGALSLGQACVA-RQWLAGRA 783 >UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YF85_METS5 Length = 743 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 256/749 (34%), Positives = 388/749 (51%), Gaps = 37/749 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCN-DGDGVEVRLREDPET---FLVQLY 62 ++ G VQGVGFRPFV++ A + + G V N G VE+ ++ ++ F + Sbjct: 2 KSFRITASGIVQGVGFRPFVFRTALKSGVSGFVRNLSGSEVEIVIQGSQDSISKFFSLFF 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGE 121 + PP +R++ + P L F I +S +QI PD + C C+ E+ PG Sbjct: 62 LNLPPQSRLEQITITPLEGDIL-QGFKILKSEKMRYEASQIPPDFSVCSECIREVLDPGN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVA 180 RRYRYPF +C +CGPRF+++R +PYDR T M FPLC C +EY DP + RRF AQ ++ Sbjct: 121 RRYRYPFNSCVNCGPRFSMMRKVPYDRENTAMVEFPLCDECAQEYNDPDNERRFDAQGIS 180 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CP+CGP L + + ++ A L GKI+AIKGIGGFH+ACD + + V TLR Sbjct: 181 CPKCGPRLYIEDMRGNRLEGDPIKLAGKLLTEGKIIAIKGIGGFHIACDPFDDDVVLTLR 240 Query: 241 ARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 ARK RP+KP AVM + + + +L +P PIVL+ K+ + ++P L Sbjct: 241 ARKGRPSKPFAVMSISSDIISNFAEINPLEKDILESPERPIVLLKKREDSPISKHVSPGL 300 Query: 295 NEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + G L PL ++LL E+ LVMTS N G P + L GI D L H+R Sbjct: 301 DREGFFLYYTPLHYMLLSEVKGNTLVMTSANRHGYPMCTTESCVKEKLSGIVDYMLYHDR 360 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +IV R+DDSV++ +G +LRR RGY P + + FK P + LGA+L+N L+ Sbjct: 361 EIVNRVDDSVIKFAGNRLHILRRGRGYAPLWIRMKSKFKT--PAIALGAELQNAGALMFD 418 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREM 466 ++ +L+Q++GD + + L + + YD P+ ++ D +PGY + + + + Sbjct: 419 DKVILTQYVGDTDKLENLQEMEKMLNFLMSTYDVRPRVILVDKNPGYQTRYVANRLSEKF 478 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 + V HH AHA + A+H + +A+ +DG+G G++G WGGE L E E Sbjct: 479 SAEIVEVQHHFAHALSVAADHG----SDEGVAIAIDGVGYGDDGNAWGGEILLFTGSEYE 534 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 L V PGGD+ A +P R LA L V + + A + + +L ++ RG Sbjct: 535 RSYHLKYVPYPGGDVNALRPRRM-LAIFLSQVMTLEEAGKIAGLNENEVIMLRSSL-RG- 591 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N SS GRF DAV+A LG +YEGE A LEA A++ G + +P V N++D Sbjct: 592 NRIYTSSTGRFLDAVSAFLGVCDRR-TYEGEPAIRLEASASN--GKLLDLDIPVVGNEID 648 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 ++ ++ + VN A L + A + ++ SGG N + Sbjct: 649 TLKAFEWLISEEGKVNDIALTVQYRLGEALAKAALKL----NPQVILVSGGAAVNEYILR 704 Query: 707 RLAHYLADFTLLFPQSLPAGDGGLSLGQG 735 L ++ P+ +P+ DGG++LGQ Sbjct: 705 GLRENSEGIEVITPRRVPSNDGGIALGQA 733 >UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST Length = 770 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 242/773 (31%), Positives = 385/773 (49%), Gaps = 43/773 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQL 61 L + G VQGVGFRP +++LA+ + L+G V N G+ VE+ ++ D + F+ Q+ Sbjct: 2 KQYTANLLVDGIVQGVGFRPTIYRLAKVMKLNGYVRNMGNIVEIVVQGTYDDIKLFIDQI 61 Query: 62 YQHCPPLARIDSVERE-PFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTP 119 +H P + I+++ + + +FTI S+ + I PD + C CL E+ Sbjct: 62 QEHKPIRSEINNIHVDIHEQTTPKYNDFTIVNSSNEISGTAVIPPDMSICDECLDEILDT 121 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 + Y YPF CT+CGPRFTII +PYDR T M FPLC C++EY +PLDRR+HA+ Sbjct: 122 NNQHYYYPFTACTNCGPRFTIIDEVPYDRKNTTMKKFPLCKHCNQEYTNPLDRRYHAEAT 181 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP+CGP + G ++ + G I+AIKGIGG HL C +A+ L Sbjct: 182 CCPDCGPEVYLYKDG-KIPTRDPIRQTSQLIDEGNIIAIKGIGGTHLVCKTSTDDAIEKL 240 Query: 240 RARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R R R +P A M P +++L + A PIV+++K L ++P+ Sbjct: 241 RERLGRKTQPFACMTPDIQTASLFVTYTQQEKEVLQSVAKPIVVLNKSPEYNLSPQLSPN 300 Query: 294 LNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ GVMLP L HLL + P VMTS N+ G P I N++ L+ IAD +L+H+ Sbjct: 301 LHNQGVMLPYTGLHHLLFKYTLEPAYVMTSANMPGNPMLIDNKEITTKLEDIADYYLLHD 360 Query: 353 RDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I+ R DDSV+R +RRSRGYVP +L LG +L TF +++ Sbjct: 361 RKILNRCDDSVIRFRNNKPSFIRRSRGYVPKPFDFT-KINTTKNILALGPELDVTFSILK 419 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAREM-- 466 + SQH+G+ S ++A++ + + Y+V D HP + +++ A+E+ Sbjct: 420 EGKCYPSQHIGNTSKYKTLEFMKDAIKHLLKLTRTDKIDYIVADMHPEFNTTKLAKELSK 479 Query: 467 --NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY-R 523 N V HHHAHAA+ ++EHQ +++A+T DG+G GE+G +WGGE L +N Sbjct: 480 KYNTELIQVQHHHAHAASLMSEHQL----DEMVAITADGVGYGEDGNIWGGEVLYLNNTG 535 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-------NYSETASVQQQNWS 576 E ++ GGL +PGGDL+ K P R + + + +YS+ ++ Sbjct: 536 EYKNHGGLTLQPMPGGDLSTKYPIRMAMGILYNIMDTEELRNLMKTDYSDYFKYGEKEVD 595 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 + + +E N SS GR D+++ LG + YEGE + LE++A + Sbjct: 596 ITLKQLENNFNTAQTSSMGRVLDSISVLLGIS-KNRGYEGECSMKLESVAREGFDLLKIE 654 Query: 637 TMPRVDNQ---LDLATFWQQ---WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 + + N ++ + + + +++ A A LA+ + + A Sbjct: 655 PIYEIKNNKTLINTSKLLYEVVKLMKSGVGIDEIACAAQRTLAEALSKIAINTAKAYNTK 714 Query: 691 TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + +GGV +N + + L +T + + GDG +S+GQ IA + Sbjct: 715 IIGVTGGVFYNEYISKVVKETLTNEGYTYIQHKQTCPGDGSVSMGQCAIAGWK 767 >UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q2Y8F5_NITMU Length = 770 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 285/755 (37%), Positives = 381/755 (50%), Gaps = 39/755 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 + I G+VQGVGFRPFV++LAQ+ L G V N V + + F V L Sbjct: 16 ARRWLIGGRVQGVGFRPFVYRLAQRFRLTGHVQNTSGQVVIEAAGKKKLLDVFGVALLAE 75 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLA+ + V E + + ++ S + I PD C C EM TPG+RRY Sbjct: 76 APPLAQPEMVHVEKIPYLERDGFEILQSSDNSSGRIHIPPDYFLCDDCKREMQTPGDRRY 135 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT CGPR+T+I +PYDRP TVM +F LC C +EY DP DRRFHA+PVACP C Sbjct: 136 RYPFINCTQCGPRYTLITKLPYDRPNTVMTSFELCSQCLREYEDPGDRRFHAEPVACPTC 195 Query: 185 GPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 GP L + AAL A++ L+ G+IVA+KGIGG+HL CDARN A+ LR KH Sbjct: 196 GPQLCLSAPEGRINGPAALTASVTALRRGEIVAVKGIGGYHLMCDARNETAIGQLRTNKH 255 Query: 245 RPAKPLAVMLP-----------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 RP KPLA+M P + + LL PA PIVL+ ++ L I P Sbjct: 256 RPHKPLALMFPWCGDDGLAQVRDELEIDAQGQALLRAPARPIVLLRRRRDSMLPRSITPG 315 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + E+GVMLP +PL HLLL EL P+V TSGN+SG+P +N +A L + FL HNR Sbjct: 316 IREIGVMLPYSPLHHLLLHELDKPVVATSGNVSGEPVLTANAEAETRLARVTRVFLHHNR 375 Query: 354 DIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I + DD VVR ++R RG P LP F V P+L +G +KN+ L Sbjct: 376 PIARPADDPVVRVIAGKPRLVRVGRGVGPVEFDLPGLF--VQPLLAVGGHMKNSIALGWN 433 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 +A+LS H+GDL + + + +Q +Y PQ +V DAH GY SS+WA LP Sbjct: 434 GRAILSPHIGDLDAPRSMAVFEQVISDLQRLYGAFPQAIVCDAHKGYASSRWADRQGLPL 493 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V H A A + T DG+G+GE+ LWGGE L + Sbjct: 494 IPVW---HHHAHASALAAEHSRELTWLTFTWDGVGLGEDNTLWGGEALLGRPGVWRRVAR 550 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 L LPGG+ A ++PWR+ A C E +L +A ++G+N+ + Sbjct: 551 LCPFRLPGGERAGREPWRSAAALCWESGIEPPAMGIR-------LELLKKAWKKGLNSRV 603 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH----PVTMPRVDNQL- 645 ++ GR FD A+ LG SYEG+A LE +A +C + + + + L Sbjct: 604 TTAGGRLFDGAASLLGLLRHA-SYEGQAGMYLENIADACDSESEVDVIDLPLFQSATGLL 662 Query: 646 --DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 D LN PV +RA FH +LA + + +GGV N+L Sbjct: 663 TADWKPLLPALLNEAIPVARRAMQFHLSLANSIMVQAQRIHASTPFDRVGLTGGVFQNKL 722 Query: 704 LRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 L L A F P+ P DGG++LGQ V Sbjct: 723 LAELAVSQLTAAGFEAYLPERTPCNDGGIALGQLV 757 >UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU5_KOSOT Length = 747 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 252/758 (33%), Positives = 378/758 (49%), Gaps = 53/758 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHC 65 ++ I G VQGVGFRPFV LA+ L LHG V N GV + L D F+ L + Sbjct: 7 FEIMINGIVQGVGFRPFVATLAEDLGLHGYVENCESGVRIVLDCDETKLREFIEILNERK 66 Query: 66 PPLARIDSVE-REPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 P A+I + + + + F I S G +NT I PD A C C+ EM + G RR Sbjct: 67 PMPAKIRELSFSKKAVKTNKIRGFRIINSKKTGKINTSIPPDIAMCDKCIGEMFSKGNRR 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NC CGPRF+I +PYDR T M F +C C+ EY + D R+HAQ C + Sbjct: 127 YLYPFTNCARCGPRFSIAYVLPYDRDKTSMDDFSMCHDCNTEYTNLRDWRYHAQTNCCED 186 Query: 184 CGPHLEWVSHGEHA-----EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CGP V ++ E A++ AI ++ G VAIKGIGG HL C + +A+ Sbjct: 187 CGPKYWIVEIIKNEIVSHFSGEEAVKQAIGIIRAGGTVAIKGIGGIHLVCKP-DPDAIKK 245 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR K RP KP A+M + + + +LL +PA PIVL+ K+ + D++P Sbjct: 246 LRNLKDRPRKPFAIMAKDLETVKKFAYVGEVEERLLLSPARPIVLLRKRGD--IFYDVSP 303 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +GVMLP + +LLL++ LVMTSGN+SG+ N +AL L ++DG L+H+ Sbjct: 304 GFHTIGVMLPYTGIHYLLLEDF-FVLVMTSGNISGEMLCADNFEALTKLSKLSDGLLLHD 362 Query: 353 RDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R IV R DDSV++ +R+SRG++P+ + +P + P +L GADLK++F R Sbjct: 363 RKIVNRCDDSVIKVLAGKPVFVRKSRGFIPEVIKIPLRNRKHPEILATGADLKSSFGFFR 422 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWARE 465 E SQ+LGDLS Q+Q+++ L+ + ++D + VV D HP Y S ++A Sbjct: 423 EESFYGSQYLGDLSYYINQVQYQKMLKRFEKLFDLHARVVVTDLHPDYFSKTLGEEYAEN 482 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + + HH AH + +AE I + DG G G +G +WGGE ++ +C Sbjct: 483 RDCEIYSCQHHVAHIYSVMAEKALK----KCIGVAFDGTGYGFDGKIWGGEFFSIDNSKC 538 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 L + +P G+LA ++P A + + ++ + +L Sbjct: 539 MRFAHLRYIPMPSGELAIEKPELMAYAYLIDSGVDLKD---------EKAHLLYE----- 584 Query: 586 INAP-LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDN 643 NAP SS GR FDA AA L ++EGEA LE++A + + + Sbjct: 585 -NAPVKTSSAGRLFDAAAAVLDVCKEN-TFEGEAPMKLESVAKRHSESFSWVLDKSALPW 642 Query: 644 QLDLATFWQQWLNWQAP--VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 Q+D ++ + + +++ A FH LA+ + + E + G + SGGV N Sbjct: 643 QIDFRKMIRELYSEKDKNSISELASKFHRTLAEAISVVCGEIKKLTGEKNVCLSGGVFQN 702 Query: 702 RLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 +LL L F + F + + D G++ GQ Sbjct: 703 KLLLEVAVALLEKKGFNVWFNEKVSPNDEGIAFGQIYW 740 >UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBC6_ELUMP Length = 736 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 259/747 (34%), Positives = 379/747 (50%), Gaps = 38/747 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++ I G VQGVGFRPF+++ A + L G V N GV + E F++ + Q+CP Sbjct: 5 RILINGVVQGVGFRPFIYKSALKFRLSGFVQNTSAGVITEAQGSKENINKFILFIKQNCP 64 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERRYR 125 P A+I+ ++ + F I S + T + PD A C C E+ P +RR+ Sbjct: 65 PQAKIEDLKITDIK-EKKEKGFLIIASKKDNIQTVFLPPDLAMCKDCGKEILNPKDRRFL 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YP NCT+CGPR +I + +PYDR T M+ F +CPAC KEY P RRFHAQP ACP CG Sbjct: 124 YPLTNCTNCGPRLSITKTLPYDRKATTMSKFKMCPACQKEYESPNSRRFHAQPNACPVCG 183 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P + + ++ + AL+ A L GKI A+K IGG+HLACDA+N AV +LR K R Sbjct: 184 PQVFFKFKNKNFKGLKALKTAAVFLDKGKITAVKSIGGYHLACDAKNPKAVTSLRLSKKR 243 Query: 246 PAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P KPLA+M + + L +PAAPIV+V KK +L I+ +LN G+ Sbjct: 244 PYKPLAIMFKDLKTAKKYCFINKIEARALLSPAAPIVIVKKKKELKL---ISDNLNNYGI 300 Query: 300 MLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 MLP PL +L L+ LVMTSGN G + +A L IADGFL H R+I + Sbjct: 301 MLPYTPLHKILFSLLKTDVLVMTSGNAKGGALCSGDGEAFKKLSKIADGFLYHEREIYNK 360 Query: 359 MDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DDS++ E+ +RR+RG+ P L K +L LGAD FCLV+ +A L Sbjct: 361 VDDSIMFEALGKMRFIRRARGFAPLPATLAK--KAKKSILALGADKTAAFCLVKENKAYL 418 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLH 475 SQ++GDL+ + AL + + PQ + D HPGY +++ + + H Sbjct: 419 SQYIGDLNKKENGGFYLTALEKNKRLLGINPQVTIADLHPGYFTNKLPFK---NVNKIQH 475 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AHA + AEH G +A+ LDG G+G +GA+WGGE L N + + + Sbjct: 476 HAAHALSVAAEHNLK---GRFLAVNLDGSGLGSDGAIWGGEFLAFNNKNWKRAAYFEPLP 532 Query: 536 LPGGDLAAKQPWRNLLAQCLR-FVPEWQNYS-ETASVQQQNWSVLARAIERGINAPLASS 593 LP GD + + W L + + +W NY +V +Q + + + I+ GIN +SS Sbjct: 533 LPAGDESVSEIWLLTLGAIKKIYGKDWTNYKYLFKNVPRQKFRLALKLIDNGINVYNSSS 592 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT--FW 651 GR FD V+ +Y+ +AA LEA + V M + + + T Sbjct: 593 AGRVFDIVSHIA-LGITKTTYQAQAAMELEAKCLRLKS-PYKVVMEKQNGCYIIKTGEML 650 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 ++ L++ + + FH + ++ + + SGGV N++L + Sbjct: 651 KEILSYSRSAEEISARFHAYMVYSVLETAKKL----KLKNICLSGGVFQNKVLLKGTVNV 706 Query: 712 L--ADFTLLFPQSLPAGDGGLSLGQGV 736 L A F + + P DGGL+LGQ Sbjct: 707 LKRAGFNVYLNEQTPCNDGGLALGQAW 733 >UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Mycobacterium RepID=A1T7M3_MYCVP Length = 777 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 296/759 (38%), Positives = 399/759 (52%), Gaps = 42/759 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 V+L I G VQGVGFRP V ++A Q L G V ND V L + + L Sbjct: 2 RVRLTITGVVQGVGFRPAVARIAAQNRLAGFVLNDARAVRCELEGPGPRVDAAVRTLRDG 61 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNTPGE 121 PPLA +DS + T F I ST T + PD ATC CL E+ P + Sbjct: 62 PPPLACVDSF-VTEMRPALGETVFRILDSTPSGDNGDRTLVSPDIATCADCLRELFDPAD 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+R+PFI CT+CGPR+T+I +PYDRP T MA F +CP+C EY DP DRR+HAQ +AC Sbjct: 121 RRHRHPFITCTNCGPRYTVITDVPYDRPTTTMAGFAMCPSCAAEYGDPADRRYHAQTIAC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 PECGP L W G H A+++A A L+ G IVA+KG+GG+HLAC A + +AVA LR Sbjct: 181 PECGPTLSWHGPGPHG---GAVESAAAALRAGLIVAVKGVGGYHLACRADDDDAVARLRR 237 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK+RPAKP AVM + + DAA + LT+ AAPIVL+ + + +AP+L Sbjct: 238 RKNRPAKPFAVMAADIEAARRICHVDDAAARSLTSAAAPIVLLPAR-AGAVSVHVAPNLT 296 Query: 296 EVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 ++GVML +P+ HLL E P LVMTS N G P + L + G+AD L H+R Sbjct: 297 DLGVMLAYSPVHHLLFAEPDMPALVMTSANQGGSPIVFRDGD-LDWIDGLADAVLTHDRP 355 Query: 355 IVQRMDDSVV----RESGEMLRRSRGYVPDALALPPGFKNVPP-------VLCLGADLKN 403 I +DSVV + LRRSRGY P +++ G + +L G D+K Sbjct: 356 IHVPCEDSVVSIDDDGNEVPLRRSRGYAPLPVSVGAGAGDGDGDGDDPAVILATGGDIKT 415 Query: 404 TFCLV-RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 TF L R +A LS HLGD++D Q + A+ + + P + HD HP Y +++W Sbjct: 416 TFALTGRYGRAHLSSHLGDMADPRTQACFAAAVDHLGFLTGSAPTVLAHDLHPQYATTRW 475 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV-N 521 A+ V HHHAHA + LAEH+ G +IA+T DG G G +G +WGGE L V + Sbjct: 476 AQRRGERLLAVQHHHAHAVSLLAEHR--RLGEPIIAVTYDGTGFGTDGTIWGGELLAVRD 533 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE-WQNYSETASVQQQNWSVLAR 580 +G L ALPGG+ A +QP R L R E + A++ +L + Sbjct: 534 PARFTRVGHLAPFALPGGEGAVRQPARIALDLLDRAGIEASDDLPPVAALGAAGLHILTQ 593 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 + RG+ +S GR FDAV++ LG + YEG+AA LE A V Sbjct: 594 QLRRGVGCVPTTSMGRLFDAVSSLLGVC-QQVGYEGQAAIELEHRA-RAGRPWRAVDFEV 651 Query: 641 VDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 LD A ++ P A AFHDA+ + + A G++T+ +GG Sbjct: 652 TAGVLDPAPVITALVDGVRRGVPSADLAMAFHDAVVRATVRAAGDAAVAAGVSTIGLTGG 711 Query: 698 VIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 V NR L A +AH L +L + +P DGGL+LGQ Sbjct: 712 VFANRRLLAGIAHGLRVRGLEVLTHRVVPCNDGGLALGQ 750 >UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4U0_DESDA Length = 978 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 311/910 (34%), Positives = 423/910 (46%), Gaps = 169/910 (18%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETF 57 M++ G+VQGVGFRPFV++LA + L G V N DGV + ++ E+ E F Sbjct: 72 MSEKQMIRRAFVASGQVQGVGFRPFVYRLAHEGGLTGTVGNTSDGVRMEVQGMPEEVERF 131 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEM 116 ++L + PPLAR+ ++ E F I S G ++ + PD C CL++M Sbjct: 132 GMRLQKELPPLARLTALRHEDMAAVPGEAAFAIVASDGHAGHSVLVSPDVGICADCLSDM 191 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P R+ Y F NCT+CGPR+TI R++PYDR T M+ FPLCP C EY DP DRRFHA Sbjct: 192 TDPENPRHNYAFTNCTNCGPRYTITRSIPYDRAVTSMSCFPLCPRCAAEYGDPADRRFHA 251 Query: 177 QPVACPECGPHLEWVS-------------------------------------------- 192 QP+ACP+CGP L +V Sbjct: 252 QPIACPDCGPRLWFVDRAAAVAGRTGVEHFRADCGLAGAEADSGPDVDNADAHDRADAAR 311 Query: 193 ----HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 G A++ A L G I+A KG+GGF LACDARN A+A LR RK+RP K Sbjct: 312 QRCLPGAETAAREAIRRAGRVLLDGGILAFKGLGGFQLACDARNERALALLRERKNRPHK 371 Query: 249 PLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV------------------- 283 PLA+M + L LLT+P PIVL + Sbjct: 372 PLALMADCLETVRAFCDLSPEHEALLTSPEKPIVLCPLRTGKARGPYATNGVDGLNGPAG 431 Query: 284 ---------PELCDDIAPDLNEVGVMLPANPLQHLLLQELQC------PLVMTSGNLSGK 328 PEL +APD +VGVMLP PL +L LQ LVMTS N G+ Sbjct: 432 KADADTPGRPELPFLVAPDAGQVGVMLPNTPLHSVLFAWLQVHAPLPPVLVMTSANAGGE 491 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV----------------RESGEMLR 372 P + N +A+A L G+AD +L+H+RDI+ R+DDSV+ R + R Sbjct: 492 PICLGNREAIARLAGLADAWLLHDRDILVRVDDSVISLRPRADVVDESGPPHRAAPFFYR 551 Query: 373 RSRGYVPDAL-------------ALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 R+RGYVP + G + V GA+LK T CL RG +A + QH+ Sbjct: 552 RARGYVPRPVFLADDGEKAGGRQPCASGRSDAACVFGAGAELKATICLTRGNEAFVGQHI 611 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLH 475 GDL + + E M+ + + P +V D HP ++S+++A ++P + H Sbjct: 612 GDLENPATLAFYEEVAAHMEKLLEVRPSALVCDLHPDFLSTRYAEARAARDSIPLWRLQH 671 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR--VNYRECEHLGGLPA 533 H AHAA+ LAE+ G +AL LDG G+G++G +WGGE L ++ E + +G L A Sbjct: 672 HAAHAASVLAENAC---FGPALALCLDGTGLGDDGTIWGGELLLMQLDTPEWQRVGCLSA 728 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVP-------EWQNYSETASVQQQNWSVLARAIERGI 586 ALPGGD A ++PWR +A + + + + A + + R I Sbjct: 729 FALPGGDAAVREPWRIAMALGRQAADAGHCLPEDIEAAAPWADGHAAAARAVEEMLVRQI 788 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG--------------- 631 N P SSCGR FDAV+A LG ++YEG+AA LE A G Sbjct: 789 NCPATSSCGRLFDAVSARLGLCL-CITYEGQAAIRLEDAALRAGGALGGAMTGRVEDLRR 847 Query: 632 ---VTHPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQ 683 + PV M D LD A + + + P A FH +LA FA++ Sbjct: 848 VAELVWPVGMALRDGLLTLDSAGLYARVVQAALGGMPAEDIAARFHLSLAAAFASMTGRA 907 Query: 684 ATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVI---- 737 A RG+ SGGV+ N ++ L L +L LP GDGGLSLGQ V Sbjct: 908 ARKRGVGVAALSGGVMQNGIMARLLPFLLERQGLKVLCHHELPPGDGGLSLGQAVWGRRM 967 Query: 738 --AAARWLAG 745 A R AG Sbjct: 968 LAAGTRMKAG 977 >UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein HypF n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4296C Length = 779 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 264/781 (33%), Positives = 414/781 (53%), Gaps = 45/781 (5%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQ 60 T V++++ G+VQGVGFRP+V+ LA++ L+G + N+ D V + + + E FL Sbjct: 8 KTYKAVKIKVGGRVQGVGFRPYVFSLAKRWQLNGTIQNNSDKVIIHVEGEEYSIEHFLHH 67 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTP 119 L + P LA+I ++E +P ++ + +F+I +S G+ I D+A C CL E+N P Sbjct: 68 LKESPPLLAKITNLEHQPTVY-KSYQQFSILESDLTGSPLPAISADSAVCQDCLNELNDP 126 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRY YPFINCT CGPR+TI+ +PYDR T M +F +C C +EY DP++RR HAQP Sbjct: 127 SNRRYHYPFINCTQCGPRYTILEKLPYDRKHTTMHSFMMCEDCLEEYGDPMNRRHHAQPT 186 Query: 180 ACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 C +CGP L V+ AE E+A++ I L G+I++IKG+GG+HLACD + A+ Sbjct: 187 CCAKCGPSLSLVNQKREVIAEGESAIRGTIDALTEGRIISIKGLGGYHLACDMKQPYAIT 246 Query: 238 TLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR K RP +PLAVM+ + + +LLT+P PIV++ +K L +++A Sbjct: 247 HLREIKSRPTRPLAVMMRSLEIVKQYCHVSLKEEELLTSPIMPIVVLKQKINRSLPNELA 306 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P L +GVMLP PL +LL + +V+TS N SG P ++ G+++ L Sbjct: 307 PGLTTLGVMLPYTPLHYLLFKLGGLEGIVLTSANSSGLPIKYHDKDLFEK-GGLSEFSLT 365 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I +DDSVV +G LR++RG+VP+ + + ++ LG KNTF + Sbjct: 366 HNRVIKNPLDDSVVEVNGLDETYLRKARGFVPEPIKTTI---DTSGIVALGGQQKNTFSI 422 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 GE ++S H+G++ ++ + + + + + + I + +V D H GY ++ A++++ Sbjct: 423 GIGEHILMSPHIGEVDNEEMLDHFIQQIGVYKRIVNIDMDHVAIDKHLGYSVNKLAKDLS 482 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 TV HHHAH AC+ ++ + + LDG G GE+G +WG E L + + Sbjct: 483 PNVVTVGHHHAHHVACMEDNGV---VDPCVGIILDGTGYGEDGHIWGFEFLYGDAAAYKR 539 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP-EWQNYSETASVQQQ-NWSVLARAIERG 585 L + LPGG++A K+PWR L P E Q +E ++ S+L + ++ Sbjct: 540 LAHMCYCPLPGGEMAVKEPWRTASGMILHHWPKEGQEMAERLFPDKKAEISILKKMVKLK 599 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL-------AASCHGVTHPVTM 638 IN+P+A +CGR FD V+A LG + SYEGEAA L A S V Sbjct: 600 INSPMAGTCGRLFDTVSAILGVCLKS-SYEGEAAIKLAGYMNENYLNARSIEKVAQSYPF 658 Query: 639 PRVDN-----QLDLATFWQQWLNWQA--PVNQRAWAFHDALAQGFAALMREQATMRGI-- 689 + + QLD + Q + + + + + FH + ++ + Sbjct: 659 KIIQSAKGPFQLDFSPMISQIIQEKEQLQLEEIIYKFHQTVVLSCVEMILALYKEKAWLP 718 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V SGG N L L++ L F + Q +P DGGLS GQ +IAA + ++ Sbjct: 719 KRIVLSGGSFQNGYLSRELSNSLKQKGFKVYAHQQIPCHDGGLSFGQLIIAAHKVKNEKL 778 Query: 748 Q 748 + Sbjct: 779 K 779 >UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomonas intermedia K12 RepID=C7I132_THIIN Length = 787 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 347/768 (45%), Positives = 447/768 (58%), Gaps = 31/768 (4%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF---LVQLYQHCPPL 68 R+RG VQGVGFRP VW+LA+ L+L G V ND DGV + P+ +L HCPPL Sbjct: 21 RVRGVVQGVGFRPMVWRLARDLDLSGTVRNDADGVLIAAWGTPDALDALPARLRAHCPPL 80 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 ARID+++ P + P +FTI S GG T++ PDAA+CPACLA++N P +RR+R+ F Sbjct: 81 ARIDAIDVVPLAPGEAPDDFTIVPSQGGHAATEVTPDAASCPACLADVNNPADRRWRHAF 140 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 NCTHCGPR +I+ A+PYDR T MA F +CP C EY DP DRRFHAQP+ACP+CGP L Sbjct: 141 ANCTHCGPRLSIVSAVPYDRASTAMADFAMCPRCATEYADPADRRFHAQPIACPDCGPTL 200 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +GE + A+ L+ G+I+AIKGIG FHL DA ++AVA LRARK RP K Sbjct: 201 WLEQNGERIVG-DPIATAVDLLRAGRILAIKGIGSFHLVVDATAADAVARLRARKRRPHK 259 Query: 249 PLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 PLA+M D + A + L+ PAAP+VL++ L IAPD +G MLP Sbjct: 260 PLALMARDLDVVRRYAALTSDDERALSGPAAPVVLLEATEPHALPYAIAPDTRLLGFMLP 319 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +PL HLLL PLV TSGN SG PP I N +AL L IAD +L+H+R I+ R+DDS Sbjct: 320 MSPLHHLLLASFDTPLVFTSGNASGAPPCIDNAEALDRLDDIADAYLLHDRPILNRLDDS 379 Query: 363 VVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 V+R + LRRSRGY P AL LP GF + P V LGA+LKNT CL+ G +A+LSQH Sbjct: 380 VLRRIAGTLQPLRRSRGYAPGALPLPHGFGDAPAVTALGAELKNTACLLAGGRAILSQHF 439 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLH 475 GDL + L + ++D P + D HPGY +++ A L V H Sbjct: 440 GDLGGTSAAAEAARGLERLSQLFDHDPDIIAVDLHPGYHATRQGRELAARDGLGLAEVQH 499 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH AAC+A+H PL+G ++ L LDG+G+G++G LWGGE LRV+Y L L VA Sbjct: 500 HHAHIAACMADHGHPLNGPPILGLALDGLGLGDDGMLWGGELLRVDYTTSTRLASLRPVA 559 Query: 536 LPGGDLAAKQPWRNLLAQCL------RFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 LPGGD A++QPWRNL AQ L + + ++ + LAR + G +AP Sbjct: 560 LPGGDAASRQPWRNLAAQLLALPAASELLARHADLPAVRHLRGKPLDTLARMVSTGAHAP 619 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDN--QLD 646 LASS GR FDAVAAALG ++EG+AA LE+LA +S + + VD +LD Sbjct: 620 LASSTGRLFDAVAAALGLHAEAQTFEGQAAMTLESLATSSTDAGAYAFALTEVDGLLRLD 679 Query: 647 LATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 A W L A F + L +A + A + SGGV N L Sbjct: 680 PAPLWPALLADLQRGVAPGTVARRFLNGLTAAWAEAIAAVAGNGPFAAIALSGGVFQNAL 739 Query: 704 LRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 + L L DF + + +PA DGGL+LGQ VIAAAR L N Sbjct: 740 ISQLLHDRLCDFDLPVWMHRRVPANDGGLALGQAVIAAARALQPNWSN 787 >UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Synechococcus elongatus RepID=Q31K38_SYNE7 Length = 770 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 281/765 (36%), Positives = 387/765 (50%), Gaps = 39/765 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ- 63 +LR++G VQG+GFRPFVW+LA++L L G V ND G ++ + + Sbjct: 8 KQERWRLRVQGVVQGIGFRPFVWRLARELGLTGWVNNDAAGAQIEVEGAIAQLQQFQQRL 67 Query: 64 --HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPG 120 P R D +++E Q EF I S +T Q+ PD A C ACL E+ Sbjct: 68 LVELPAAGRCDRLQQERLTL-QGDREFVIATSMASEQSTAQLPPDRAPCSACLRELWDLR 126 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPF+NCT CGPR +I+R +PYDR T +A FPLCP C +EY+DP DRRFHAQP+A Sbjct: 127 DRRYRYPFLNCTVCGPRASIVRQLPYDRNRTTLATFPLCPDCQREYQDPSDRRFHAQPIA 186 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP CGP L+ A+++ +L AIA L+ GKI+A+KG+GGF L DA ++AV Sbjct: 187 CPTCGPQLQLWDAQGQVLADRDRSLTEAIAALQQGKILALKGLGGFQLLVDACQTDAVQR 246 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK RP KPLA++LP + + A +LL +PAAPIVL+ IAP Sbjct: 247 LRDRKSRPHKPLALLLPDLEAVRQLCQISAAEAELLQSPAAPIVLLRAIASEPWLAAIAP 306 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 D E+G+MLPA PL HLL ++ PLV TSGN SG P AL L IAD +L+H+ Sbjct: 307 DCCELGLMLPATPLHHLLSRDFGQPLVATSGNRSGDPLCWDEVDALESLSAIADLWLVHD 366 Query: 353 RDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I MDDSV + ++LRR+RGYVP +A+ P+L LG+ KNT + Sbjct: 367 RPIALPMDDSVTRIIDGQIQVLRRARGYVPTPIAIATP---AEPLLILGSWQKNTPAIAA 423 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 Q L+ ++GDL + + ++ + +Q + P V DAHP + A Sbjct: 424 DGQLQLAPYVGDLESLAARDRRQQVIEHLQTVMGLQPTAWVADAHPD--APLLAPTETRS 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH AH A AEHQ + L DG G G + +WG E L + Sbjct: 482 GWHVQHHLAHVLAVAAEHQLQP---PFLGLAWDGSGWGLDQTVWGSEALICQTEGWQRWR 538 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIERGINA 588 L L GGD AAK+P R+ LA + + + E +V L +A Sbjct: 539 HLQLWPLLGGDRAAKEPRRSALALLWQLEGDRCWDLPELQTVFSPTERSLLQAWLSRDRG 598 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 SS GR F+A+A +YEG+ A LE +P+++ + +D Sbjct: 599 LKTSSMGRLFEAIAWICRW-QGDQTYEGQVATWLENQCDPQIVGDYPLSL--TETGIDWR 655 Query: 649 TFWQQ-WLNWQAPVNQ--RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 + Q W + QA ++ A FH +L Q AL ++ G+ ++ SGG NR L Sbjct: 656 SLLQAVWCDRQADLSTAILATRFHRSLIQLVVALAQQA----GLEPVILSGGCFQNRFLL 711 Query: 706 ARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 L A F + Q LP DGG++ GQ + A W G Sbjct: 712 EGAIAALRSAGFQPYWAQQLPPNDGGIAAGQVL--AVHWYGGSKH 754 >UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Helicobacter RepID=C3XM42_9HELI Length = 778 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 243/776 (31%), Positives = 359/776 (46%), Gaps = 68/776 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLA 69 + G VQGVGFRPFV+++A++ + G V N GV + + E F L P +A Sbjct: 11 LEGVVQGVGFRPFVYKIAKKCGIVGYVRNTTSGVTILAQGTNEALECFEKALQT-PPKVA 69 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERRYRYPF 128 +I + + ++ +F I QST + N + D A C CL EM P RR+ YPF Sbjct: 70 KITKITKTESKKTESFLDFKILQSTQESALNAVVPADIALCKECLEEMWNPKNRRFHYPF 129 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+CT+CG R+++I A+PYDR T MA F +C C +EY +P RRFH++ C +CGP L Sbjct: 130 ISCTNCGGRYSLIHALPYDRKSTAMAQFRMCKECLEEYENPDSRRFHSEINCCEKCGPKL 189 Query: 189 EWVSHGE-------------------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACD 229 + + + L A+ LK GKI+A+KGIGG+ L C+ Sbjct: 190 FFTGNLGFFKELEISQSDFALCQKFIKEFTQNPLDKAVEFLKQGKILAVKGIGGYALVCN 249 Query: 230 ARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV 283 N+ A+ LR RK+RP KP A+M L +++L + API+L D K Sbjct: 250 GLNTEAIMVLRMRKNRPRKPFALMCKDLKMAESYVHLSAFQKEILDSNIAPILLCDFKDK 309 Query: 284 PELCDDI-APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ 342 L + AP+L +GV+LP PL +LL + + PL+ TS NLSG+P + +L Sbjct: 310 SPLPHSVIAPNLETLGVILPYAPLHYLLFEAIDFPLIFTSANLSGEPIIKDFSGIVENLG 369 Query: 343 GIADGFLIHNRDIVQRMDDSVVR-------ESGEMLRRSRGYVPDALALPPGFKNVPPVL 395 + DG L+++R+I+ +DDS+VR E ++LRR+RG++ D L FK+ L Sbjct: 370 DVCDGVLLYDREILNPIDDSLVRTILYNGKEQMQVLRRARGFLCD---LNLPFKSKQDFL 426 Query: 396 CLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHP 455 LGA K TFCL ++ +LS HLGDL + +L Y + V D HP Sbjct: 427 ALGAQQKATFCLKTQDRVLLSPHLGDLDSVASVENFLNTQKLFIERYQSALKDFVLDLHP 486 Query: 456 GYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 Y ++ N Q V HH AH + + E++ V+ + DG G GENG +WGG Sbjct: 487 NYTQREFIEGSN-KAQRVQHHFAHLLSNITENEI---NEPVLGVIFDGTGYGENGKIWGG 542 Query: 516 ECLRVNYR---ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETAS 569 E L N + E + + L GG+ A K+ R L+ E + Sbjct: 543 EFLSWNPKMPLEFKRVAHFDDFTLLGGEKAIKEIKRLGLSLVFESFKEGHKELDLPLFRE 602 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 +++ + E L +S GR FD V+A G SYEGE LE+LA Sbjct: 603 FSKEHLEIFYNLKESA--KVLCNSAGRLFDGVSALCGVCL-QASYEGEGGMVLESLALKA 659 Query: 630 HGVTHP-----VTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMR 681 + + ++ + L + A FH LA A + Sbjct: 660 FKKLESQNLGAYSYEIKEGVINYQPMIRGICKELELGVEACEIALRFHITLASVIAKVAE 719 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI 737 + + SGG N LL L + + +P DGG+S+GQ Sbjct: 720 DYPC------VALSGGCFQNALLTQLTLEKLKGKKVYLNKKIPCNDGGISIGQAYF 769 >UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXE2_METI4 Length = 790 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 257/781 (32%), Positives = 367/781 (46%), Gaps = 47/781 (6%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETF 57 MA + ++++GKVQGVGFRP+V++LA+ +L G V N DGV + + E F Sbjct: 9 MADKE--AIHIQLKGKVQGVGFRPYVYRLARSYDLKGWVSNGTDGVHIHVEGQKEILERF 66 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEM 116 L + PPLA + + L F +++S ++ IV PD C +C E+ Sbjct: 67 YRDLLRDYPPLALLTESFCREAPFLGLE-GFIVKESIEEKEHSVIVLPDLDVCESCKEEL 125 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 RR+RYPFI CT CGPR++II ++PYDR T M FP+C C +EY +P DRRF++ Sbjct: 126 YCSSNRRFRYPFITCTECGPRYSIIYSLPYDRSKTTMNIFPMCKDCLEEYENPSDRRFYS 185 Query: 177 QPVACPECGPHLEWV--SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 Q +C ECG + E A+ E A++ + G+IVA+KGIGG+ L DA N Sbjct: 186 QTNSCKECGIRVYLYGKQKEEIAQGEEAIKEGAWAIAEGQIVAVKGIGGYLLMADALNPA 245 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLV-DKKYVPELC 287 A+ LR RK R +KP A+M L + + L + PI+++ KK + Sbjct: 246 AILKLRERKRRASKPFALMFNDIQEVEKEVYLSEKEKSWLISRQKPILILQRKKTQSPIA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 D +AP + +G+MLP PL LLL L+ PLV TS N+SG P L + D Sbjct: 306 DLVAPAQDTLGIMLPYTPLHILLLDYLKRPLVATSANISGLPIVFEEGMLFLKLGHVFDK 365 Query: 348 FLIHNRDIVQRMDDSVVRES-----GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 L HNRDIV DDSV+R S LRRSR + P L L LGA+ K Sbjct: 366 VLTHNRDIVVPQDDSVIRVSFFFKQTIFLRRSRSFAPF-LNASLRVPKGECYLALGAEKK 424 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS-- 460 +T C LSQ+LGDL + +++ L N++ F PQ ++ D HP Y S Sbjct: 425 STVCFCHEGNIFLSQYLGDLDCFEAEENFKKTLSHFFNLWGFKPQKIILDLHPLYRSRLI 484 Query: 461 --QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 + E N+ HH AH A LAE + V+ + DG G GE+GA+WGGE Sbjct: 485 GEAMSEEKNIERIYFQHHKAHFWAILAEKKLLGLEEPVLGVIWDGTGYGEDGAVWGGEFF 544 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 E + L GD A ++P + L + +++ + W Sbjct: 545 LYYKGRMERVNHFEYFPLLLGDKAVREPRISALGIFRKERKIVEDFLK-PKFNPWEWKTY 603 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC--------- 629 ++R S GR FDA+A+ LG S+EGEAA AL+ LA+S Sbjct: 604 RALLDRK-KYWACCSVGRLFDALASLLGLCD-RASFEGEAAIALQRLASSSVQSLSDLEK 661 Query: 630 ---HGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM 686 + R + +L ++ + + P + + FH L + L+ + A Sbjct: 662 IPLRWFDEKAPLRRPISLENLLKSIEKSIVEEIPKEEISLGFHFWL----SKLIGKLAEN 717 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 G + FSGGV N LL L A F L F + D +S GQ +I A G Sbjct: 718 TGARKIAFSGGVFQNSLLVDLLYLQWAGRFDLFFHDEISPNDENISFGQ-LIGALYGKEG 776 Query: 746 E 746 Sbjct: 777 R 777 >UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NIU7_CORDI Length = 744 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 289/769 (37%), Positives = 386/769 (50%), Gaps = 66/769 (8%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE----DPETFLVQLYQ 63 + +RG VQGVGFRP V +A + + G N+ V V + + F+ + Sbjct: 3 RTRYLLRGVVQGVGFRPHVAAVAARHRITGLCGNNDLEVFVEAQALSEDILDAFISDVLA 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGER 122 PPLA + +V + T+F I S T I PD ATCP CLA+M P R Sbjct: 63 TLPPLAHVVTVTQSSCPPISHETDFRIVASEHLPGARTLIPPDVATCPDCLADMADPNNR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYRYPF CTHCGPR +II +PYDRP T M FP+CP C KEY DP DRR+HAQP++CP Sbjct: 123 RYRYPFTTCTHCGPRLSIIEDLPYDRPLTTMKHFPMCPQCAKEYSDPHDRRYHAQPISCP 182 Query: 183 ECGPHLEWVSHGE-------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 +CGP L WV E + + + GKIVA+KG+GGFHL CDA N A Sbjct: 183 DCGPSL-WVEATETPGRPPLRLRVDDPIAYCRDAISKGKIVAVKGLGGFHLMCDATNDEA 241 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVD--KKYVPELC 287 V TLR RKHRP KPLAVM+P + + AR +LT PA PIVLV K +L Sbjct: 242 VRTLRERKHRPTKPLAVMIPDVEKARELARLDADTTAVLTDPAHPIVLVPTTSKQRLKLS 301 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 IAP L+ VG++LP PL LL + P+V TS N SG+P N+ A +L +AD Sbjct: 302 LLIAPGLDYVGLVLPYTPLHTLL---VDSPVVATSANNSGEPLCWDNDVARENLTHLADV 358 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPP---VLCLGADL 401 FL+H+R I ++DSVV S +RRSRG+ P L +P + P L +G +L Sbjct: 359 FLMHDRPIHIPVEDSVVVPSAHGIVPIRRSRGFAPLPLTIPTFAEAGQPALSTLAVGGEL 418 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNTF L + A +S H+GD+ Q + A+ M ++ P +V D HP Y ++ Sbjct: 419 KNTFTLAHEDYAHISSHIGDMGSWPSQQAFHRAVDQMLSMQRTRPDLLVCDLHPSYATTA 478 Query: 462 WAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 WA+ ++P V HH AHA A LAEH+ G + L DG G G + +WGGE Sbjct: 479 WAQRYSESNDIPLVQVQHHEAHAMALLAEHR--ACGTPAVILAADGTGYGHDNTIWGGEL 536 Query: 518 LRVNYR-ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ---Q 573 L + E +P L GGD A + PWR + +W E++ + Sbjct: 537 LSYHPDTGFERTWHVPTFELVGGDRAVQHPWRIAAGIAHAWGLDWDCGKESSILSHTSAA 596 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 ++ + G SS GR FDA AA +G P S+E E+A EA A +C Sbjct: 597 EIELVESQLSSGFGVVRTSSLGRVFDAAAAIVGIHP--PSFEAESAMLFEAAARNCE--- 651 Query: 634 HPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 R + + L + P W FH A+AQ + E A G++T Sbjct: 652 -----KRESEATSFPEAFAELLETRNP-----WTFHHAVAQILQHHIDEAA--VGMST-G 698 Query: 694 FSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 +GG N+LL + L + Q +P DGGLSLGQ V+ RW Sbjct: 699 LTGGCALNQLLSSMLRVD------MRHQIVPPNDGGLSLGQAVLG--RW 739 >UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales RepID=HYPF_RHILV Length = 759 Score = 835 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 291/744 (39%), Positives = 383/744 (51%), Gaps = 44/744 (5%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCPPLARIDS 73 G VQGVGFRPF ++LA+ + L G V ND GV + + D F + PPLARIDS Sbjct: 22 GAVQGVGFRPFAYRLARAMRLSGFVLNDSAGVLIEIEGRDANHFPEAVRTQAPPLARIDS 81 Query: 74 VEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTH 133 ++ + + F I +S GG T+I DAATC C E+ P R + YPF+NCTH Sbjct: 82 IDVLELVPAGGER-FEILESLGGRSATRIGADAATCDGCRRELTDPASRFFGYPFVNCTH 140 Query: 134 CGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSH 193 CGPRFTI RA+PYDR T MA+FP+C C +Y DP +RRFHA+PVACP CGP L Sbjct: 141 CGPRFTITRALPYDRAHTSMASFPMCRTCAADYVDPENRRFHAEPVACPNCGPRLS---- 196 Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM 253 ++ A+L+ G IVA+KG+GGFHL CDARN A+ LR RK KP AVM Sbjct: 197 -------HPIKEISARLEGGAIVALKGVGGFHLLCDARNDGAIGLLRLRKAGDQKPFAVM 249 Query: 254 LPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 + + +A LL +PA PIVLV + EL IAP L VG+ML P+ Sbjct: 250 VRDIEAARQLARPNEAEEALLISPARPIVLVAAR-AGELSGLIAPGLTRVGLMLAYAPVH 308 Query: 308 HLLLQELQC-------PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 HLLL EL LV TS N G+P N+ A L IAD + H+RDIV R D Sbjct: 309 HLLLDELSRSSPHCHAALVATSANPGGEPLVADNDDAGRRLVAIADLVVTHDRDIVVRAD 368 Query: 361 DSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSV++ + +RR+RG+VP+ + L + P V+ GADLKNT C+ RG +A LSQ Sbjct: 369 DSVMQVIDGAPAFIRRARGFVPEPVDLGA---DGPSVIATGADLKNTICVTRGREAFLSQ 425 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHH 477 H+G L + RE + + +I D P++ D HP + S + A +NLP V HH Sbjct: 426 HIGGLDNAEAIRFQREVIAHLCSILDVKPEFAACDLHPDFRSVRTAEGLNLPIVPVQHHL 485 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALP 537 AH AA +A+ + G V+ L LDG G G +G WGGE + +++ + G L + LP Sbjct: 486 AHVAAVVADDRL---SGPVLGLALDGHGFGTDGTSWGGEIVVIDHHRWQRAGSLMPLPLP 542 Query: 538 GGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 GD AA++PWR +A + + + L + P+ SS GR Sbjct: 543 SGDRAAREPWRMGVAALQAAGRI--DLAPQLWPGHSGVTQLTAMFSGSMPTPVTSSLGRL 600 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW 657 FDA AA G YEG+AA EAL + + ++ D LD Sbjct: 601 FDAAAAIAGVRL-VQDYEGQAAMEFEALVRAPRCLAGGYSIG--DGTLDFRPLILHLAEQ 657 Query: 658 QAPVNQRAWA-FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--AD 714 P A FH L G A A RG + GG + NR+L A LA L Sbjct: 658 GRPCGADAADVFHGTLIAGLADWAARGAAARGTRQVALGGGCMMNRVLAAGLARALRERG 717 Query: 715 FTLLFPQSLPAGDGGLSLGQGVIA 738 P+ PA DGG++LGQ A Sbjct: 718 LEPSLPRLAPANDGGIALGQPAYA 741 >UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F0N3_9HELI Length = 770 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 246/770 (31%), Positives = 379/770 (49%), Gaps = 58/770 (7%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPP 67 L + G +QGVGFRPFV+++A + L G V N+ GV++ ++ E + FL +L ++ P Sbjct: 6 LNLTGTIQGVGFRPFVYKIATKYFLKGYVLNNNQGVKILIQGNQESIQNFLKEL-KNPPS 64 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPGERRYRY 126 A+I S+ ++ ++ ++F I++S ++ T I D A C C+ E+ P +RR+ Y Sbjct: 65 AAKITSITQKKIPNKKIFSDFEIQKSQTHSIKTATIPADLALCQECINELFNPKDRRFLY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI+CT+CG R+++I ++PYDR T MA F +C C +EY + RRFH++ CP CGP Sbjct: 125 PFISCTNCGGRYSLIHSLPYDRQNTAMANFKMCKICQQEYTNSNSRRFHSEINCCPNCGP 184 Query: 187 HLEWVSHGEHAEQ--------------EAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 + + +H + ++ ++ AIA LK GKI+A+KGIGG+ L CDA N Sbjct: 185 QVFFTTHLNYNDKPLLDSQIIPFLKTTPNPIKNAIAALKNGKILALKGIGGYALICDATN 244 Query: 233 SNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPEL 286 ++ LR RK+RP KP A+M L + LLT+ APIVL K +L Sbjct: 245 QESIQILRDRKNRPKKPFAIMCKDLKMAMSFASLNKKEKNLLTSQIAPIVLSYAKTKNKL 304 Query: 287 C-DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 IAP+L +G++LP PL +L+ E++ PL+ TS N+SG+P LQGI Sbjct: 305 PLHLIAPNLATLGIILPYAPLHYLIFNEIEFPLIFTSANISGEPIIKDFYTITQKLQGIC 364 Query: 346 DGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 DG L++NRDI +DDS++R + ++LRR+RGY+ D P + LGA K Sbjct: 365 DGVLLYNRDIFNPIDDSLIRILNKKTQILRRARGYLSDIPFSTPH--TQKNFIALGAQQK 422 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 +TFCL + +LS HLGDL++ + +++ L L Y D HP Y + Sbjct: 423 STFCLKFHNKLLLSPHLGDLNNLESFLNFKQNLNLFTQQYQAKIDTFCADLHPNYAYKEL 482 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 N T + HH AH + +AE++ +V+ + DG G G +G +WGGE L N Sbjct: 483 LPSKN--THFIQHHFAHLLSNIAENRI---SSEVLGVIFDGTGYGLDGNIWGGEFLFYNP 537 Query: 523 RE---CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ----QQNW 575 ++ + + L GG++A K R + E + ++ Sbjct: 538 KKPLTFQRIASFAPFYLLGGEVAIKDIRRLGIEALFVAFKEHYKTLKLPLLESLKKDYGK 597 Query: 576 SVLARAIERGINA--PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG-- 631 +L ++ N +S GR FD VA+ T SYEGE LE+LA Sbjct: 598 DILTFFYKQHQNTQNYTCNSVGRIFDMVASLCNLTQKT-SYEGEGGMLLESLAYKAQKNK 656 Query: 632 -VTHPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 + N + T Q+ L + P+ A FH LA ++ + Sbjct: 657 IQAISYSFAIKKNIILWDTMIQEIYYDLQNRIPIENIALNFHFTLANIIKHIVNQY---- 712 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI 737 T+ SGG N +L L + + Q +P DGG+S GQ Sbjct: 713 --ETIALSGGCFQNAVLTQLTLQILKNKKVFLNQEIPCNDGGISFGQAYY 760 >UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F9D0_SORC5 Length = 783 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 285/781 (36%), Positives = 381/781 (48%), Gaps = 52/781 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 + LR+ G VQGVGFRPFV++ A L L G V N GVE+ ++ F+ L + Sbjct: 3 RLALRVYGIVQGVGFRPFVYRRASALGLGGWVRNRPGGVEIEVQGPERSLHAFVAGLTRE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERR 123 AR++ +E E Q F I S G + D A C C E+++ RR Sbjct: 63 PSAPARVERIEIER-RAEQDAGPFQILGSEAGNGARPSVPADLAVCEECAREVDSETGRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 RYPF +C CGPR+TI+ +PYDR T M FP+CPAC EY DP DRRFHA+P+ACP Sbjct: 122 RRYPFTSCARCGPRYTILSGLPYDRARTTMDRFPMCPACAAEYADPSDRRFHAEPIACPA 181 Query: 184 CGPHLEWVSH---------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP ++ V+ + AL+ A A + GK+VA+KG+GGFHL DA + + Sbjct: 182 CGPRVQLVAAARDPMDPGIRSSGSPDGALREAAAAVLAGKVVAVKGLGGFHLLVDATSPD 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDK----KYVP 284 AVA LR RK R AKP AVM D + A L P APIVL+ + Sbjct: 242 AVALLRRRKRRDAKPFAVMFGSLDAVRGACRVSAAEADALRGPEAPIVLLRRLSPAAARV 301 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 + D +AP +G +LP PL L+L+ + P+V TSGNLS +P AL L GI Sbjct: 302 AIADAVAPGTPRLGALLPYTPLHRLVLELVGRPVVCTSGNLSDEPICTDASDALERLGGI 361 Query: 345 ADGFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 AD FL+H+R IV+ +DDSV R E+LRR+RG+ P L L + PP+L LG L Sbjct: 362 ADLFLVHDRPIVRPLDDSVARVGHAGVELLRRARGFTPLPLPLRI---DAPPILALGGHL 418 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K+T L Q V+SQHLGD + ++ P+ + D HP Y S+ Sbjct: 419 KSTTALFFDGQVVVSQHLGDAHTAEGAALIERTALDLTRLFRVRPERIACDLHPDYAGSR 478 Query: 462 WAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 A ++ P V HHHAH AAC+AEH G V+ L DG G G +GALWGGE Sbjct: 479 IAEQLAAAFRAPLVRVQHHHAHVAACVAEHGLD---GPVLGLAWDGAGYGLDGALWGGEA 535 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L V+ L + LPGG+ A ++P R+ L + E A + Sbjct: 536 LVVDGASFRRAAHLRSFPLPGGERAMREPRRSALGLLWELLGEGARDHARAWFRDAELGP 595 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPV 636 L + RG +P +S GR FD VAA S+EG+AA LE LA A+ +P+ Sbjct: 596 LFSMLARGTGSPRTTSVGRLFDGVAAL-AGLRGAASFEGQAAMELECLAEAAGERAGYPL 654 Query: 637 TMPR----VDNQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 + + +D L A FH A + A G+ Sbjct: 655 PLRASAAGMPAVIDFGPLLDAVLGDRRDGVSPGVIAARFHA----ALADVAEALAAASGL 710 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V +GG N LL A + L + P+ P GDGGLSLGQ ++AA R E Sbjct: 711 GRVVLAGGCFQNALLAASIRERLTARGVEVFTPRLYPPGDGGLSLGQVLVAARRGTDAES 770 Query: 748 Q 748 Sbjct: 771 D 771 >UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein HypF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A6B Length = 818 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 307/809 (37%), Positives = 407/809 (50%), Gaps = 91/809 (11%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPL 68 R+ G VQGVGFRP+V++LA++L L G V ND GV + + FL L + PPL Sbjct: 2 RVEGVVQGVGFRPYVFRLAEELGLAGFVLNDVHGVLAEVEGEDAAVARFLALLPERAPPL 61 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 AR++ V F I +S GGT + ++ PD ATC CLAE++ P +RR+RYP Sbjct: 62 ARVEGVAVRDLDPVGDGGAFAIVESVAGGTPDARVSPDTATCDDCLAELSDPADRRFRYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F+NCT+CGPRFTI+R +PYDRP T MA+F +C AC EY DP DRRFHAQP ACP CGP Sbjct: 122 FLNCTNCGPRFTIVRGVPYDRPATTMASFAMCAACRAEYDDPRDRRFHAQPNACPACGPR 181 Query: 188 LEWVSHGEHAEQEAALQ-----------------AAIAQLKMGKIVAIKGIGGFHLACDA 230 + +A AA A+L G+IVA+KG+GG+HLAC A Sbjct: 182 ARLLDAEGREIADAPASPDAVGPADAPAFPDAVAAAAAELLAGRIVAVKGVGGYHLACRA 241 Query: 231 RNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVL-----VD 279 VA LRARK R +P A+M+ L +A +LL + A PIVL Sbjct: 242 DEERVVAALRARKRREQRPFALMVASVAAARALVELGEAEERLLCSRARPIVLAARRADG 301 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLL-QELQCPLVMTSGNLSGKPPAISNEQAL 338 + D +AP E+G+MLP PL LLL PLVMTSGN+S +P A + +AL Sbjct: 302 GAAGARVADAVAPGAPELGLMLPYTPLHQLLLTDAGGVPLVMTSGNVSDEPIAFDDAEAL 361 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVRES-------GEMLRRSRGYVPDALALPPGFKNV 391 L IAD L+H+R I R DDSV+R LRRSRG+VPD +ALP Sbjct: 362 RRLGAIADLLLVHDRPIATRTDDSVMRVVEVAGARRPLPLRRSRGFVPDGIALP--LTAT 419 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P+L GA+LK+TFCL +G A + H+GDL + + +R+ + + ++ TPQ V H Sbjct: 420 RPILACGAELKSTFCLAKGTTAWVGHHIGDLQNYATERSFRDGIAHFERLFAVTPQLVAH 479 Query: 452 DAHPGYVSSQWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENG 510 D HP Y S+ +A + T V HHHAH AACLAEH + G + DG G+G +G Sbjct: 480 DLHPDYRSTAYALEREGVETVAVQHHHAHLAACLAEHG---ETGTAVGAIYDGTGLGTDG 536 Query: 511 ALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA-- 568 +WGGE L + +G LP V+LPGGD AA++PWR A + + + Sbjct: 537 TVWGGELLLGDLTGFARVGSLPPVSLPGGDRAAREPWRMACAWLIAAREDAAPPAAAPPA 596 Query: 569 --------------------------------SVQQQNWSVLARAIERGINAPLASSCGR 596 + + W+ +AR G +P +S GR Sbjct: 597 AAPPAAAPPAAAPPAAAPPAAAPPPIPPALAGRIAPERWAAIARMAASGFASPPTTSMGR 656 Query: 597 FFDAVAAALGCAPA-TLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW- 654 FDAVAA G A +YEG+AA LEA+A + + + + Sbjct: 657 LFDAVAALCGMRAAVAATYEGQAAIELEAIADRAERGAYELPLAPAPPGAPPLLLYAHVT 716 Query: 655 -------LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 L + FH ALA A + A+ G +V SGGV NRLL Sbjct: 717 IRQVVADLAAGTQTGVVSARFHRALATATATACAQVASDAGTDLVVLSGGVFQNRLLLEE 776 Query: 708 LAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 A L A +L P LP DGG+S GQ Sbjct: 777 TAARLQAAGLHVLVPLQLPPNDGGISYGQ 805 >UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUH9_9DELT Length = 845 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 318/832 (38%), Positives = 425/832 (51%), Gaps = 106/832 (12%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLARI 71 G+VQGVGFRPF+++LA + L G V N DGV + ++ P + F V+L + PPLAR+ Sbjct: 13 GQVQGVGFRPFIYRLAVEGGLSGSVGNTSDGVRIEVQGPPEQVDAFAVRLRRELPPLARL 72 Query: 72 DSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERRYRYPFIN 130 +E TEF I S G ++ + PD C CL +M+TPG R+ Y F N Sbjct: 73 TRLEVTDLPTVDGETEFVIVASHGHAGHSVLVSPDVGICEDCLRDMHTPGNPRFGYAFTN 132 Query: 131 CTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW 190 CT+CGPR+TI R++PYDR T MA FP CP C+ EYRDPLDRRFHAQPVACP+CGPHL Sbjct: 133 CTNCGPRYTITRSIPYDRATTSMACFPFCPRCEAEYRDPLDRRFHAQPVACPQCGPHLWL 192 Query: 191 VSH------------------------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 V + A A+ A A L+ +++A+KG+GGF L Sbjct: 193 VDNPLLPPGGTLPPDSAPAGWPGPETLPSEASMRDAVARAAALLRDDRLLALKGLGGFQL 252 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDK 280 ACDAR++ +V+ LR RK RP KPLA+M+P LP LL P PIVL Sbjct: 253 ACDARSARSVSLLRLRKRRPHKPLALMVPDLATARELCDLPPEHEALLLCPEKPIVLCPA 312 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL-------QCP---LVMTSGNLSGKPP 330 + L IAPD +G+MLP PL +L EL P LVMTS N SG+P Sbjct: 313 RK-GCLPPSIAPDTAAIGIMLPYTPLHAVLFDELVRLTAAAGEPAPVLVMTSANASGEPI 371 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSV--VR----------ESGEMLRRSRGYV 378 + N +AL L +AD +L+H+RDI+ R+DDSV VR + RR+RGYV Sbjct: 372 CLGNREALRRLAHLADAWLLHDRDILVRVDDSVAGVRPLPADGEQPAATPFFYRRARGYV 431 Query: 379 PDALALPPGF-KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRL 437 P + LP + ++P VL G +LK T CL RG +A +SQH+GDL + + E R Sbjct: 432 PRPVMLPEAWGSDLPCVLGAGGELKATLCLTRGNEAFVSQHVGDLENAPTFGFYEEVARH 491 Query: 438 MQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDG 493 +Q++ + P VV D HP ++S++ A E+ LP + HH AHAA+ L EH Sbjct: 492 LQDLLEVRPAAVVCDLHPDFLSTRHATELARREGLPLWHLQHHAAHAASVLTEHGHT--- 548 Query: 494 GDVIALTLDGIGMGENGALWGGECLR--VNYRECEHLGGLPAVALPGGDLAAKQPWRNLL 551 G +AL LDG G+G + ++WGGE L ++ + LG L LPGG+ A ++PWR L Sbjct: 549 GPALALALDGTGLGTDKSIWGGELLFMELDAPRWQRLGRLAPFRLPGGEAAIREPWRIAL 608 Query: 552 AQCLRFVPEWQNYSE------------TASVQQQNWSVLARAIERGINAPLASSCGRFFD 599 L+ + + + Q + ++ RG+N P SS GR FD Sbjct: 609 GLALQTGMAPEVLTGIWTAGGESGDDVRRAPQAMAVTAVSEMWRRGLNCPSTSSAGRLFD 668 Query: 600 AVAAALGCAPATLSYEGEAACALEALAASCHGVTH----------------------PVT 637 AV+AALG ++YEG+AA LE AA P+T Sbjct: 669 AVSAALGLCTH-ITYEGQAAIRLEDAAARSPLPEQWWRMGPEELRAPQPQHELLSALPLT 727 Query: 638 MPRVDNQLDLATFWQQWL--NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 QLD + L + PV A FH LAQGFAAL A G+ + S Sbjct: 728 EEGGLWQLDGPALFAAVLAQRHRLPVEDLAARFHWQLAQGFAALAVRAAGPTGVRVVGLS 787 Query: 696 GGVIHN--RLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 GGV+ N L T L Q +P GDGG++LGQ A A AG Sbjct: 788 GGVMQNALLARLLPLLLAAHGLTPLCQQEVPPGDGGIALGQAAWAQACLRAG 839 >UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridia RepID=A4XJQ0_CALS8 Length = 757 Score = 828 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 234/758 (30%), Positives = 356/758 (46%), Gaps = 39/758 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQ 63 + RG VQGVGFRPF++ LA+ L L G V N G+GV + + + + + Sbjct: 4 KRYRYIFRGLVQGVGFRPFIYNLAKDLGLVGFVKNIGEGVLAEFQGELKSTAAIDEYIEK 63 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 P A+I+++E+ + +F I S+ G ++T + D C C E G R Sbjct: 64 KLPRNAKIETIEKYEIEPNFNEDDFYILDSSKGKISTIVPYDLGLCEECKREFYDKGHRH 123 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + PFI+C +CGPR+TII ++PYDR T M F C C KEY P +RRF+AQ CP Sbjct: 124 FMNPFISCINCGPRYTIIESLPYDRDRTSMKEFEFCCDCKKEYYTPDNRRFNAQSTTCPV 183 Query: 184 CGPHLEWVSHGEH----AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CGP L S E L +++ GKI+AIKGIGGFHL D N +V L Sbjct: 184 CGPRLFLYSFVEKKHIDGSNLELLDRVCYEIEKGKIIAIKGIGGFHLVVDPYNKESVERL 243 Query: 240 RARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 K+R KPLA++ + + +A ++ +P PI+L ++K L + Sbjct: 244 FRSKNREGKPLALVCKDIETVKKYCDVSEAEEEIFNSPRCPIILFERKTDHFL--HVNAG 301 Query: 294 LNEVGVMLPANP-LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ +G+M P L ++L + + L+ TS NLSG P I ++AL L IAD L HN Sbjct: 302 LHTLGIMRAYTPILDYILTKTNRDLLIATSANLSGIPMIIDEDEALEKLCDIADFVLYHN 361 Query: 353 RDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R IV+R DDS V+++ ++R RG+ P L + +L LG K T L + Sbjct: 362 RKIVRRCDDSVGFVLKDKFVLIRSGRGFAPITFKLKEKAVD-KNILALGGHEKTTIALKK 420 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWARE 465 ++ +LSQ+LGDL + +L + ++YDF Y+ D H Y ++ + A++ Sbjct: 421 EDEVILSQYLGDLDTKEYIDFYEGSLIDLISLYDFDFDYIACDYHKDYYTTSLAQKIAKD 480 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 N V HH AH +C+ E I DG G+G +G +WG E ++ E Sbjct: 481 QNKEVVFVQHHLAHIYSCMLEKNLQ----SCIGFAFDGTGLGLDGKIWGSEGFVIDGLEA 536 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 + + L L GG A K+P R PE ++E+ + + + + Sbjct: 537 KRVFHLQYYPLVGGQKAIKKPVRLAYYFSKIISPE---FAESFFGGNEFLHQIFKT-AQT 592 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP-RVDNQ 644 N PL SS GR FD V LGC S+E + LE +A + M + + + Sbjct: 593 FNYPLTSSMGRLFDIVGVLLGCGEKN-SFEAQIPMLLETIADRNENGFYIFLMNFKHEIE 651 Query: 645 LDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 +++ QQ + + FH+ +A+ + + +V SGGV N Sbjct: 652 INIVDILQQIIHDIKRNVDRRIISAKFHNTVAKIVVEVAKVLRENYNKDIVVLSGGVFQN 711 Query: 702 RLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 +LL ++ L F + F P DGG+S GQ Sbjct: 712 KLLLSKTVSLLEEEGFKVFFNTVFPINDGGISAGQVYY 749 >UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGN1_9GAMM Length = 842 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 275/839 (32%), Positives = 392/839 (46%), Gaps = 100/839 (11%) Query: 1 MAKNTSCGVQ----LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---D 53 M+K + +Q + + G VQGVGFRPF++ LA+Q L G V N GV + ++ + Sbjct: 1 MSKKEAPKLQTRRLIEVCGIVQGVGFRPFIYLLAKQHQLQGWVLNHPQGVHIDVQGPENE 60 Query: 54 PETFLVQLYQHCPPLARIDSVE-----REPFIWSQLPTEFTIRQST---------GGTMN 99 + F+ + Q PPL++IDS+ P F+IRQS+ + Sbjct: 61 LDIFIKNIRQQAPPLSQIDSITCKSSAVHSLDDMPKPGVFSIRQSSLSLAKNKSNDTQFS 120 Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I D + C ACL ++ P R YRYP NCTHCGPRF+II A+PYDR T MA F +C Sbjct: 121 THISADFSICNACLDDIRDPNSRYYRYPLTNCTHCGPRFSIINALPYDRKNTSMADFVMC 180 Query: 160 PACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEA----ALQAAIAQLKMGKI 215 P C + Y DP +RR+HAQP++CP CGP ++W + LQ A + ++ GKI Sbjct: 181 PECLQAYEDPANRRYHAQPISCPRCGPQIQWRMSDGSTSPSSDSMQVLQKAASAIRAGKI 240 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLT 269 +AIKGIGGFHL CDA N AV LR K+RP KPLA+M+ +A LL Sbjct: 241 IAIKGIGGFHLVCDASNQKAVNKLRISKNRPLKPLAIMVKDRTQAQHYVQGGEAEWALLG 300 Query: 270 TPAAPIVLVDKKYV-------------PELCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 + PI L+ K +L +IA ++ +G+MLP PL +LL ++ Sbjct: 301 SQQRPITLLQKHDALSLQSVSNKHNKILDLASNIAENVPYLGIMLPYTPLHYLLFDHIES 360 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRR 373 LV TS N SG+P I + Q GF+ H R IV DDS+V SG +MLR Sbjct: 361 ALVFTSANYSGQPILIEGDDVATKFQHCIAGFIDHPRKIVNSCDDSLVHFSGGQRQMLRL 420 Query: 374 SRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV-----RGEQAVLSQHLGDLSDDGIQ 428 RG+ P ALP PVL GA K +F L + QA++S ++GDL++ +Q Sbjct: 421 GRGFAPYYFALPNTL--TQPVLATGAQQKVSFALGAPQNEKQSQALISPYIGDLNNLEMQ 478 Query: 429 MQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACL 484 ++ + + ++ + D HP Y + +WA + + TV HH+AH + + Sbjct: 479 QDYQHRVMSLTLLHQIKVAHYCCDKHPRYATHRWAHQQVNDNSADISTVPHHYAHVLSVM 538 Query: 485 AEHQWPLDGGDVIALTLDGIGMGE---------------NGALWGGECLRVNYRECEHLG 529 AE+Q V+ + DG G+G+ N LWGGE L + + Sbjct: 539 AEYQLQ---QRVLGFSFDGTGLGDIDSTQHAHNPLTPSKNCTLWGGEVLIADIKNSHRCY 595 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-------NYSETASVQQQNWSVLARAI 582 L A L GG+ A P R L A L + Q + + + Q +NW VL Sbjct: 596 SLKAFRLIGGEQAITSPARLLFALLLEYYSIKQIQMMHLSAFEKLGAHQLENWHVL---W 652 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL--------AASCHGVTH 634 E+GIN+P SS GRF DA A L T+S+EGE LE L A S + Sbjct: 653 EKGINSPYTSSIGRFIDAYCALLS-GLETISFEGECGLLLEQLALNEGNKNALSKREKSA 711 Query: 635 PVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDA--LAQGFAALMREQATMRGITTL 692 P+ + D + + + A L +AL+ + + Sbjct: 712 PL-FTLNAGEFDFLPLLKHVIERLTADKSTSLYQQGASLLFTQLSALIITISDQYPTLPI 770 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 V GGV NR+L + L T Q++P DGG++ GQ A + N Sbjct: 771 VLCGGVFQNRVLMDCVLSQLKRRKKTYYVSQTIPLNDGGIAAGQLWFVAHKNTLENKLN 829 >UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Coriobacteriaceae RepID=C7MLP5_CRYCD Length = 848 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 287/850 (33%), Positives = 391/850 (46%), Gaps = 124/850 (14%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 + + + + G VQGVGFRPFV++LA++ +L G V N DGV + D + F + + Sbjct: 2 TEALNIHVTGIVQGVGFRPFVYRLARKHHLCGWVLNGVDGVRIHAEGSQSDLDHFALAIA 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIR--QSTGGTMNTQIVPDAATCPACLAEMNTPG 120 P A+++ V +P T F IR T T T + PD ATC CL E+ P Sbjct: 62 DEAPAAAKVERVLLDPASVESFET-FEIRFSDDTDTTSTTLVSPDLATCDDCLYELFDPA 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RR+ YPFINCT+CGPRFTI R +PYDR T M F +CP C EY DP DRRFHAQP A Sbjct: 121 DRRFHYPFINCTNCGPRFTITRELPYDRANTSMGPFKMCPDCAAEYADPADRRFHAQPDA 180 Query: 181 CPECGPHLEWVS----------------------------------HGEHAEQEAALQAA 206 C ECGPH+ W + +A + A Sbjct: 181 CFECGPHISWWVSPSATDRVAGMLANQESWASDASDWAPTYDQRKIGRNQVQSDAIIAAC 240 Query: 207 IAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GL 260 IA L G IVAIKG+GGFHLACDA N A+A LR RK RP KPLA M+ D Sbjct: 241 IAVLTAGGIVAIKGLGGFHLACDATNEQAIAELRRRKRRPGKPLACMVATLDKARALCQT 300 Query: 261 PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 LL++PA PIVL+ K+ ++ L+E+G+MLPA PLQHL+L+ LVM Sbjct: 301 TQEEEALLSSPARPIVLLRKRSDVSFATGLSDGLSEMGLMLPATPLQHLILRAFGGMLVM 360 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES--------GEMLR 372 TSGN+ +P + +A L +AD F+ ++R I++R DDSVVR + +M+R Sbjct: 361 TSGNVHDEPIQTDDARAAHVLADVADAFVGNDRPILERYDDSVVRVAFIDADDSIVQMIR 420 Query: 373 RSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWR 432 R+RG+ P + LP + V G + KNT L R +A +SQH+GD+ + W Sbjct: 421 RARGFAPQPVPLPKDTPD-ECVFATGPEQKNTLALTRPGEAFVSQHIGDMENAQTNDAWL 479 Query: 433 EALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLD 492 EA + ++ TP V+ D HP Y++S+WA +LP V HHHAH A+ LAE+ Sbjct: 480 EAAAAFKRLFHLTPSRVICDMHPEYLTSKWALAQDLPVVRVQHHHAHIASVLAENALE-- 537 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 G + DG G G +GA+WGGE L + E LP G A P R Sbjct: 538 -GPALGFAFDGTGYGVDGAIWGGEVLLADLSSFERFANFSYFPLPSGAGAITHPPRCAYG 596 Query: 553 QCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPAT 611 F + + + S + + A+ I+RG+N P SS GR FDA +A LG Sbjct: 597 VLWAFDLLDHPGAASALSALGETADLCAQMIDRGVNCPQTSSVGRLFDAASALLGLCTEA 656 Query: 612 LSYEGEAACALEALAA-SCHGVTHPVTMPRVDNQLDLATF--------WQQWLNWQAPVN 662 YEGE AC LEA S + R + D ++ A + Sbjct: 657 R-YEGEGACLLEAAIDYSADDAVVDSVVRRAASNCDTPDLDSAHANAVVNSAVDSTAEAD 715 Query: 663 QRAWAFHDALAQGFAALMREQATMRGITTLVF------------------SG-------- 696 + A H EQ+T + L+ +G Sbjct: 716 KSAIT-HRYRVDIVKNAATEQSTAQDTAVLLLDAAPLFRALLDDKQAQVATGVIARRFHD 774 Query: 697 -----------------GV---------IHNRLLRARLAHYL--ADFTLLFPQSLPAGDG 728 GV NR L + L A + + + LP DG Sbjct: 775 AIVRAIVQMAQLGEALYGVRQTALSGGVFMNRYLLEQTVSALSAAGYAVALNRDLPPNDG 834 Query: 729 GLSLGQGVIA 738 +S GQ V+ Sbjct: 835 CISYGQAVVG 844 >UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vinelandii RepID=HYPF_AZOVI Length = 776 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 307/771 (39%), Positives = 395/771 (51%), Gaps = 45/771 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G+V N G GV + L P+ F Sbjct: 1 MNQPAEAGVRLLLRGRVQGVGMRPCVHRLATSLGLAGEVRNTGAGVRIDLLGPPQALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEM 116 +L PPLAR+D+++REP F I S P DAA CPACL E+ Sbjct: 61 ERRLPDELPPLARLDAIQREPLPAGTRFAGFAIAASRDERRGALAPPPDAAVCPACLEEL 120 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C +EY DP DRRFHA Sbjct: 121 FDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRVQTSLAGFELCPECRREYEDPADRRFHA 180 Query: 177 QPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 QP+ACP CGP L ++ A+A L G+I+A++G+GGFHLACDARN+ AV Sbjct: 181 QPIACPACGPRLCCEDASGRRLSGDPIERALAALARGEILALRGVGGFHLACDARNAGAV 240 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPE--LCD 288 A LR RK RPAKP A+M L + L+ PAAP+VL+ K+ + L Sbjct: 241 AELRRRKRRPAKPFALMAANPASLQALVELNENGLAELSGPAAPVVLLRKRPAADDLLAA 300 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQE-LQCP-------------LVMTSGNLSGKPPAISN 334 +APDL +G MLP +PL LL E P LVMTS NLSG PP N Sbjct: 301 GVAPDLAWLGAMLPHSPLHWLLFHEAAGRPAGTGWAAAPQDLLLVMTSANLSGAPPITGN 360 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNV 391 +A L GIAD +L+H+R+I+ R DDSVV G ++R RG P + L + Sbjct: 361 AEARERLAGIADLWLLHDREILNRCDDSVVSALGRAPLVIRSGRGLAPLEIPLA---RGG 417 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P +L LG LKN CL RG++A LS H GDL D + + + P+ V Sbjct: 418 PSILALGGQLKNAVCLTRGDRAWLSPHNGDLDDADTCRALERTVARLGELLGIRPERVAC 477 Query: 452 DAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP + +S++AR+ LP + HHHAH AA +AEH V+ L LDG G+G Sbjct: 478 DLHPDFFASRFARDYAERHGLPLHPIQHHHAHIAATMAEHGL---AEPVLGLALDGFGLG 534 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G L GGE LRV C LG L + LPGGD A+++PWR + T Sbjct: 535 ADGRLRGGELLRVAADGCAWLGELNPLPLPGGDQASREPWRMAAGALHALGRGGE--IAT 592 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 + + +AR +ERG N P +SS GR FDA AA L YE EAA LE+ Sbjct: 593 RFAAEPGNAAIARMLERGFNCPPSSSAGRLFDA-AAGLLGLGGRQRYEAEAALRLESRVV 651 Query: 628 SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 P D+ L A FH L + A A Sbjct: 652 GLPERV-PALWRIDDDNRLDLLPLLARLADMRDTRAGAELFHGVLIEALAIWAARAAEAT 710 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 G+ + GG N +LR L L A T L + P DGGL+LGQ Sbjct: 711 GLHRVALGGGCFLNTVLRDGLCARLRAAGLTPLLARRAPLNDGGLALGQAW 761 >UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C225_9PLAN Length = 765 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 250/758 (32%), Positives = 369/758 (48%), Gaps = 33/758 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 +++ + G+VQG+G RP V + A++L L G +CN +G+E+++ E F L Sbjct: 13 KIAIRITLSGRVQGIGLRPAVARRARELRLAGSICNTTEGIELQIEGPEKVVEEFERDLE 72 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 + P I RE I + T G + ++ D A C CLAE+ P + Sbjct: 73 NYLPDETIIHQKTRETTKNCGSERFDIIEKQTSGPLAARVPADIAVCQDCLAELADPADH 132 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ Y F++CT CGPR++++ +MPY+R T M+ + LC C +EY P+D RFHAQ +ACP Sbjct: 133 RFGYAFLSCTRCGPRYSLLHSMPYERGQTGMSKYDLCSHCQREYDSPVDCRFHAQTIACP 192 Query: 183 ECGPHLEWVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 +CGP + S A+Q+A L+ G IV +KG+GG+ L DA + AV LR Sbjct: 193 QCGPRVWCTSTTGETNDSDTEAIQSAARALQQGAIVGLKGLGGYQLLVDATSEAAVQMLR 252 Query: 241 ARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +K R KPLAVM+ + DA + L +PAAPIVL+ + ++ P L Sbjct: 253 EKKQRLGKPLAVMVTDLIAARKLAMMNDAEAETLASPAAPIVLLQAHENSPIAGNVNPGL 312 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 N VGVMLP PL LLLQ+ PLV+TS N G+P + + +AD +L H+R Sbjct: 313 NTVGVMLPTTPLHWLLLQQCDFPLVVTSANREGEPLFYQDRSHSEKINTLADCWLEHDRP 372 Query: 355 IVQRMDDSVVR-ESGE--MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I + +DDSVVR +G +R +RG P +L L P + LG K L G Sbjct: 373 IERPIDDSVVRWMAGRLVTIRLARGLAPLSLDLEHP----QPAIALGGHQKAAVALNNGA 428 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 Q+VL+ H+GDL + ++ E L +Q +Y + + D HP Y +S A + + Sbjct: 429 QSVLAPHIGDLESLAVCERYEEQLESLQQLYAVSQADYICDEHPDYFTSNRASQPVSRVE 488 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH A + E W V+ + DG G G++ +WGGE L + +G L Sbjct: 489 RVQHHHAHIVAGMLEQGW--LDRQVLGVAFDGTGRGDDQTIWGGEFLLSTAAQYTRVGHL 546 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 LPGG+ A ++P+R ++ + + ++ + + + I+ +P Sbjct: 547 KPFLLPGGEAAVREPYRVAVSLMTETLG--SEAALNTGIKTELVRPVLQIIKSKRLSPRT 604 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR-VDNQLDLATF 650 SS GR FD VAA + YEG+AA LEA ++ + + + QLD Sbjct: 605 SSVGRLFDGVAALV-LGVTHSEYEGQAAMLLEASCDLAEAGSYEMPLSQGAPFQLDWRPC 663 Query: 651 WQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 L A FH LA+G A L R+ + +V GGV NR L Sbjct: 664 IAAILRDRKAGVSTGVMAMRFHRGLARGTARLCRQFMPLS----VVLGGGVFQNRCLVEL 719 Query: 708 LAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWL 743 LA L L P +P DGGL+ GQ +A R Sbjct: 720 LAEELRQNDQPLGLPGRIPPNDGGLAAGQLAVAIVRSK 757 >UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=cellular organisms RepID=A8TDR5_METVO Length = 830 Score = 813 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 256/826 (30%), Positives = 406/826 (49%), Gaps = 107/826 (12%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 ++ + G VQGVGFRPFV+ +A++ NL G V N G+ VE+ + D FL+ L + P Sbjct: 4 KIFVSGIVQGVGFRPFVYNIAKKNNLKGYVKNKGNFVEIVVNGNLKDINNFLINLKEEKP 63 Query: 67 PLARIDSVEREPFI---------------WSQLPTEFTIRQSTG--GTMNTQIVPDAATC 109 L++I+ +E E +L EF I S + I PD A C Sbjct: 64 VLSKINKLEIEDIDTNNDLDNDLNNKLDGLEELNKEFHIYSSQNVNNEVAGTIPPDIALC 123 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 C+ E+ + RY YPFI C +CGPRFT+I+ +PYDR T M FPLC C+KEY++P Sbjct: 124 DDCIKELKDKKDIRYEYPFIACVNCGPRFTVIKKLPYDRENTSMDKFPLCENCEKEYKNP 183 Query: 170 LDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 DRRFHAQ C +CGP + + E+E+A++ A+ L+ GKI+AIKGIGG HL Sbjct: 184 NDRRFHAQANCCDKCGPKVFLTDSNGNKLLEKESAIKKAVELLEDGKILAIKGIGGTHLV 243 Query: 228 CDARNSNAVATLRARKHRPAKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKY 282 CDA N +A+ LR R +RP + A+M P+ + L + PIV + KK Sbjct: 244 CDANNDDAILELRKRLNRPTQAFAIMSTEEKYPLFSKFTKIEEEALNSYRRPIVALKKKE 303 Query: 283 VP---ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 + ++I+ +L+ VGVMLP + L +LL + VMTS NL G P AI+N++ + Sbjct: 304 NGYNKYISENIS-NLDTVGVMLPYSGLHYLLFGKC-TAYVMTSANLPGLPMAITNDKIIE 361 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALP----------- 385 L+ IAD FL+HNRDIV R DDSV++ +LRRSRGY P+ + + Sbjct: 362 SLKDIADYFLLHNRDIVNRCDDSVLKLISNRMMILRRSRGYAPEPIEIDFSKMAEFENKN 421 Query: 386 -------------------PGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 K ++ +GA+L + CL +G + ++Q++G+ S Sbjct: 422 KYKNKDENENENKEIINELNNKKIEKNIISVGAELNSVACLTKGNKFYMTQYIGNTSKYE 481 Query: 427 IQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWA----REMNLPTQTVLHHHAHAA 481 ++A+ + + + +V D HP + S ++A +E + P + HH AH Sbjct: 482 TYNYLKDAVHNILRLTNTNKLDTIVCDLHPQFNSKKFANELTKEYDAPMFEIQHHAAHVY 541 Query: 482 ACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN-YRECEHLGGLPAVALPGGD 540 + + ++ + I + LDG+G G++G +WGGE L + E +G L GGD Sbjct: 542 SLMGDNGF---FEPNITIALDGLGYGKDGNIWGGELLYCDKNYEIHRIGHLEEQLQLGGD 598 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNY-------SETASVQQQNWSVLARAIERGINAPLASS 593 L+ K P R L + + + +++ + + ++ ++ I+ G+N + +S Sbjct: 599 LSTKYPLRMLFSILSKKMSLDESFEFVKKYIGKYPELTEKELKLIKMQIKSGLNTAITTS 658 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQ 653 GR D+VAA L +Y+GE + LEA A SC + V+N ++ + + Sbjct: 659 TGRVLDSVAALLSVCFKK-TYDGEPSIRLEAFANSCDEKEKKQILEFVENMDNIR--YSR 715 Query: 654 WLNWQAPVNQ---------------------RAWAFHDALAQGFAALMREQATMRGITTL 692 ++++ + + A+ H LA + A I TL Sbjct: 716 LIDYENNIIKTSEIVYDCYTLLQNEVFSKKGIAYYAHLVLANCLCIISENSAKKLNINTL 775 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 +GGV +NR++ + L F +L ++P GDGG++ GQ V Sbjct: 776 GLTGGVSYNRIITEYMVIKLKNKGFNILLHNNVPNGDGGIAFGQSV 821 >UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RDT6_ARCPR Length = 753 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 250/774 (32%), Positives = 391/774 (50%), Gaps = 72/774 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ +RG VQGVGFRPFV++LA+ +NL G V N G G VE+ + + + F+ +L + PP Sbjct: 2 YRITVRGIVQGVGFRPFVYRLAKSMNLKGYVKNTGTGCVEIVIDRNVDEFIRRLKEEKPP 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRY 126 +A I +F I +S G + P D A C CL E+ P RRY Y Sbjct: 62 IAE-IHEVEVEEIPDLNFNDFVIEKSGGKKGGLSLPPPDVALCKFCLKELFDPKNRRYLY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI+CT CGPRF++ +PYDR T FPLC C KEY + LDRR++AQ +ACP+CGP Sbjct: 121 PFISCTDCGPRFSVAIKLPYDRENTTFNEFPLCDECQKEYWNVLDRRYYAQSIACPKCGP 180 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 E + G + A+ A + G++VAIKGIGG+H+AC + + V LR + RP Sbjct: 181 QYELIYGGRIIKGLDAIIRAAELIDEGRMVAIKGIGGYHIAC-ITDDDVVFKLRDKLGRP 239 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P A+M + + + + +T+ PI ++ K+ P +AP LN +GVM Sbjct: 240 QQPFAIMARNLEVVRKVAYVSEDEEREMTSYIRPITVLKKR-NPNEFFAVAPYLNTIGVM 298 Query: 301 LPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP +PL ++L L+ +VMTS N G+P I + +L D +L HN I R+ Sbjct: 299 LPYSPLHYILFNYLKSDFIVMTSANKPGEPMYIDDGVFSLEL----DAYLRHNLKIHNRV 354 Query: 360 DDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSV++ G ++RRSRG+VP + L L +GA+L N+ LV+ +A++S Sbjct: 355 DDSVIKFVGRRRLIIRRSRGFVPKVIELKGCLDG----LAVGAELYNSITLVKDGKAIVS 410 Query: 417 QHLGDLSDDGIQ-MQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQ 471 Q++G+ ++ ++ A+ N D P+Y+ D HP Y ++ +A ++N+P Sbjct: 411 QYIGNTANFKTFNEFFKRAVDFFTNFIDLKPKYIACDLHPLYNTTNFAERLSRKLNIPLY 470 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE--CEHLG 529 V HH AHA + +AE IA+T+DG+G G +G +WGGE L +++ + +G Sbjct: 471 KVQHHFAHALSVMAERGI----DKAIAITVDGVGYGFDGTIWGGEVLLIDFERGTFKRVG 526 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFV-PEWQNYSETASVQQQNWSVLARAIERGINA 588 L L GGDLA K P R L + + + E + +++ + E GI Sbjct: 527 RLERFRLIGGDLATKYPLRVLFSLLYNAKRLDLLDGYEKYLRKGESFEIFESFHETGI-- 584 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP----------VTM 638 +S GR DAV+A L +YEGE A LE++ P + Sbjct: 585 -ATTSMGRVLDAVSAMLKICFER-TYEGEPAMKLESVVEPFECEVKPRIDVVREDSVYSK 642 Query: 639 PRVDNQLD--------------LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQA 684 P VD + + +A +++L ++ ++ A+ LA+GFA ++++ Sbjct: 643 PYVDEEFNVKSGDVRVIRISDFIANCMEEYLEGESK-SKIAYKVMKYLAEGFAEIVKDYN 701 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 +V SGGV N + ++ + + + GD G+S GQ I Sbjct: 702 -----YPVVASGGVCFNSYFIPLIEEHV---DVYVNEKVACGDNGISFGQAYIG 747 >UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota RepID=D1YUL8_METPS Length = 747 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 255/756 (33%), Positives = 377/756 (49%), Gaps = 42/756 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 V++ RG VQGVGFRPFV LA +L G V N G VEV D + F+ + Sbjct: 2 KKVRILARGIVQGVGFRPFVHNLAVAHSLSGHVKNLGTSVEVVAEGKDADVDAFVEGMR- 60 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 P L+RIDS++ +S +F I +S+ I PD C CL +M R Sbjct: 61 RGPKLSRIDSLDVSEEPYSGDYRDFRIEKSSASGFGGFIPPDTGICNNCLEDMRG-ESRF 119 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y +C CGPR+ I+ +PYDR T M FP C C ++Y+DP +RR+HAQ +CP+ Sbjct: 120 KDYWAASCVDCGPRYAIMDTLPYDRDNTTMTDFPFCEDCLRDYKDPKNRRYHAQGFSCPK 179 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L ++ I L G+I+AIKG+GGFHL C + LR R+ Sbjct: 180 CGPRLYLYGEDRKPLA-PPVEETIRLLNEGRILAIKGVGGFHLCCKM---DVTPLLRQRR 235 Query: 244 HRPAKPLAVM--LPVADG---LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 +RP +P A+M LPV + + + R LL + PIVL+ +K+ + + +AP L+ VG Sbjct: 236 NRPEQPFALMAPLPVIEKYAHVNEGERGLLDSMQRPIVLLRRKH--GVPESVAPGLHTVG 293 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 M P HLL +++ PL+MTS NL +P NE+A L+GIAD +L+H+R I+ R Sbjct: 294 FMTPYTGFHHLLFKDIGEPLIMTSANLPSEPMVKDNEEAFRRLKGIADYYLLHDRRILNR 353 Query: 359 MDDSVVRESGEML--RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSV+R + M R +RGY P + + +L +G +L ++ + + S Sbjct: 354 CDDSVLRYNDGMFFTRMARGYAPAMFPMKKS--SPKAILAMGPELNSSVSIYKDNLCYTS 411 Query: 417 QHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQT 472 HLG +++ RE + + + TP+ VV D HP ++SS+ A++ T Sbjct: 412 HHLGHINNPLALDFLRETVDRLLKMTKVTPEIVVTDMHPSFLSSRLGRELAQQFKADVVT 471 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH AH + + E ++ DV+ + +DG+G GE+G +WGGE H GL Sbjct: 472 VQHHRAHIGSLVVE---GVELEDVVGVAMDGVGYGEDGTVWGGEIF----HGGAHPAGLL 524 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE-TASVQQQNWSVLARAIERGINAPLA 591 V +PGGDLA K P R + V E + A++ V+ + +ER +N + Sbjct: 525 PVPMPGGDLATKFPMRMVAGILYGSVDEGRLLRIMEANMGPTEAQVILKQVERKVNVAYS 584 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASCHGVTHPVTMPRVD--NQLDL 647 SS GR D+VAA LG +YEGE A LE+ A + V P + R+D N +D Sbjct: 585 SSAGRVLDSVAALLGVCYRR-TYEGEPAMKLESFAFPGDANKVDLPCDIIRMDGRNVVDS 643 Query: 648 ATFWQQWLNWQAPVN---QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 + + ++ A + +LA+ FA A G + SGGV N + Sbjct: 644 RSLLRAVVDAMDEGKNRHDIAASAQVSLARAFAEQACRAAKKSGAPVVGLSGGVAVNAAI 703 Query: 705 RARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 + Y+ + LP GDGG+S GQ V+A Sbjct: 704 GRTIEDYVKSEGLKFVTNHKLPCGDGGVSFGQAVLA 739 >UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Methanomicrobiales RepID=A2STT5_METLZ Length = 742 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 243/758 (32%), Positives = 364/758 (48%), Gaps = 40/758 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLA 69 ++ +RG VQGVGFRPFV+ AQ+ + G V N G VE+ + + + P ++ Sbjct: 5 KIILRGIVQGVGFRPFVYAQAQRFGIKGTVINHGSEVEIDAAGEEFDAFCREIRKGPKMS 64 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 IDSV EP P +FTI +S G + D ATC CL ++ P R + Y Sbjct: 65 VIDSVSVEPLHDWNPPADFTILKSQDGARTGFVPADIATCEHCLHDIMDPNSRYFGYWAT 124 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 +CT CGPR++II+++PYDR T M FP CP C K+Y +P +RR HAQ + C ECGP L Sbjct: 125 SCTDCGPRYSIIKSVPYDRERTSMDEFPACPDCLKDYENPGNRRHHAQTITCRECGPKLS 184 Query: 190 WVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + GE+ E + AA L G IVA++G+GGFH+ C L+ RP + Sbjct: 185 LLKGTGENIEGADPISAAAELLDAGNIVAVRGVGGFHICCV---EKTAERLKQNLGRPNQ 241 Query: 249 PLAVMLP---VADGLPD---AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 LAVM+ + D + + LL P PI+++DK + L+ +GVMLP Sbjct: 242 SLAVMMKPETMRDFVVEPTKEEWDLLKGPVHPIMILDK--IDPESHRALSQLHNLGVMLP 299 Query: 303 ANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 L HLL +L+ P L+MTS N G P + + + + D L H+R+IV R DD Sbjct: 300 YTGLHHLLFAKLKSPLLIMTSANAPGTPMITETKIIIEKMGRVVDYILTHDREIVNRCDD 359 Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGD 421 SVVR+ G ++R SRG+ P + G + +L +G +L + +G + S H+G+ Sbjct: 360 SVVRD-GYLIRMSRGFAPLRTRMDLGDRQ---ILGVGPELNANATIYKGGFLITSPHIGN 415 Query: 422 LSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHH 477 + + E + + ++ P+ + HD HP ++S++ A V HH Sbjct: 416 IRNPPTVAYLEETIEKLTSLTGSMPKIIAHDLHPQFLSTRVAQELAERYGATLCPVQHHC 475 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECEHLGGLPAVAL 536 AH A+ E +V+ + +DG+G GE+ +WGGE L + G L V + Sbjct: 476 AHIASVTTE--------EVVGIAIDGVGYGEDATIWGGEILAGSPGNGYMRTGHLEPVLM 527 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGR 596 PGGDLA K P R L + + + +LA+ E+ N P+ +S GR Sbjct: 528 PGGDLATKFPERMLYGIL--PTKDTLSLLQNRGWNDTALRILAQQTEKRFNTPVTTSTGR 585 Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ--LDLATFWQ-- 652 DA AA LG +Y+GE + LEA AA +++ + + L ++ + Sbjct: 586 VLDAAAALLGICRER-TYDGEPSMMLEAYAARGVAQPMEISIESREGRDVLLTSSILREG 644 Query: 653 -QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + L+ V A + LA+G A GI T SGGV NR +R + Sbjct: 645 MEMLSDGISVEDIAASIQTTLAKGIADTALAGIEKTGIHTAALSGGVAINRSIRETIIET 704 Query: 712 LADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 L + + L P GDG +S GQ V A G + Sbjct: 705 LKEAGVACLTNPRYPFGDGCISCGQVVTAGILAKEGRI 742 >UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax=Campylobacter RepID=B9KGD4_CAMLR Length = 732 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 237/743 (31%), Positives = 351/743 (47%), Gaps = 36/743 (4%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQH 64 G ++ I+G VQGVGFRPFV+ +A++LNL G+V N+ GV + L ++ E F +L+ + Sbjct: 5 GYEIHIKGLVQGVGFRPFVFNIAKELNLKGEVYNNSLGVVIILECSNDELEIFKEKLFAN 64 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLARID + EF+I S + I+ D A C C E R+ Sbjct: 65 LPPLARIDDFNFSYKKLQKTYNEFSISTSQDSEKFSPILSDFALCEDCYNEFYDEKNPRF 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +YPFI CT+CGPRF+II+ +PYDR T M F +C C EY DP +RRFHAQP++CP+C Sbjct: 125 KYPFITCTNCGPRFSIIKKLPYDRVNTTMNEFKMCSFCQSEYDDPTNRRFHAQPLSCPKC 184 Query: 185 GPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 + ++ A+ E A L+ GKI+A KG+GGFHL CD+ N NA+ LR R Sbjct: 185 KITIFLKDKNQNILAKDEKAFILLAKLLEEGKIIAFKGMGGFHLICDSTNKNAINELRIR 244 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K+RP KP A+M+ + +A +LLT+ PIV+++ K + +APD N+ Sbjct: 245 KNRPKKPFAIMVKDLKMAQELAFINEAEAKLLTSNLKPIVILNSK---NIHKSLAPDTNK 301 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ML +L + + P++ TS NLS + + L L + D +L ++R I Sbjct: 302 IGIMLAYMGTHLMLFEHFKKPIIATSANLSSQSIIYEETKLLEQLSDVFDFYLDYDRAIY 361 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 DDS+ + G+ LR SRG P + F +L LG++LKN F Q Sbjct: 362 NSSDDSIAQVIGKEVMFLRTSRGLNPLYINTAGIFNAKENILALGSELKNEFACFFKNQI 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 +S ++GD+ IQ ++ + L QN Y ++ D HP + + ++ V Sbjct: 422 FISPYIGDMKSLDIQERFFKILTFFQNSYKLNFDQILSDKHPQFNYVKEFKDY--KNFRV 479 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH+AH ACL EH+ DV+A DG G G++G +WGGE R N + E L Sbjct: 480 QHHYAHLCACLFEHKI--YKNDVLAFVFDGTGYGDDGKIWGGEIFRANLKSYERLNHFKN 537 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASS 593 L D K LA F E + A Q + L + + + SS Sbjct: 538 FKLINAD--IKNIANLALALIFDFNLESKASEFLAKFSQVKLNNLKKIHTQS--SLYTSS 593 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQ 653 GR DA A L YE + +E + + + ++ + Q Sbjct: 594 LGRIIDAFGA-FAFDMQKLDYEAQIGLLMEKYYD--KNLDYNYKFDIYEKEICFKNAFLQ 650 Query: 654 WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 L + V L G A L+ E + ++ GGV N+ L L Sbjct: 651 ALEDKDKV-----KISTGLLNGIANLIIEYSKDFK-EEVLLCGGVFQNKTLLEILVR--K 702 Query: 714 DFTLLFPQSLPAGDGGLSLGQGV 736 +F P D ++LGQ V Sbjct: 703 NFAYKTSLQFPCNDSSIALGQLV 725 >UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS78_CLOPH Length = 792 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 244/801 (30%), Positives = 352/801 (43%), Gaps = 87/801 (10%) Query: 16 KVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF---LVQLYQHCPPLARID 72 VQGVGFRP V+ +A++ ++ G V N G VE+ F + +L + I Sbjct: 1 MVQGVGFRPLVYYIAKKHHIKGYVRNVGGYVEIMAVSSAADFLYFITELQMDHGNGSEIV 60 Query: 73 SVEREPFIWS---------------------QLPTEFTIRQSTGGTMNTQIVPDAATCPA 111 ++ E + + +F I S + + PD CP Sbjct: 61 KLDIETLSANVESVNNVSMENESMENVSHTTEAYEDFVIIHSESSEEISILPPDLPVCPN 120 Query: 112 CLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD 171 C E+N P +RY PFI+C CGPR+TII +PYDR T M + LC C +EY P Sbjct: 121 CQRELNDPANKRYHNPFISCVACGPRYTIIEELPYDRDNTTMVDYRLCEDCYEEYTSPDS 180 Query: 172 RRFHAQPVACPECGPHLEWVSHGEHAEQEA-----------------------------A 202 RR HAQ ++C +CGP+L + + Q+ A Sbjct: 181 RRHHAQTISCNDCGPYLILQDNTDLILQDNTDLNKNNKHILKDSLGPIAEDNHRLINQQA 240 Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGL-- 260 L A +K G I+A+KGIGG+H C AV LR K R KP AVM D + Sbjct: 241 LHQAAEIIKSGGILAVKGIGGYHFVCSPFKEEAVVNLRRLKGREEKPFAVMFETIDSIRE 300 Query: 261 ----PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 + +LL T A PIVL+ + G LP PLQ LL ++ Sbjct: 301 YCNVSEEEEKLLMTKARPIVLLYMHRD-VMAPSTNKGSIYCGTFLPYTPLQILLTRDCG- 358 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV---VRESGEMLRR 373 PL+MTSGN+SG P +E+ L+ G L + R IV+ +DDSV + +++RR Sbjct: 359 PLIMTSGNISGSPIIREDEKMLSLRSPYLQGVLYNTRRIVRSVDDSVAKIIDHKPQLIRR 418 Query: 374 SRGYVPDALALPPGFKNVPPVL-CLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWR 432 SRG+VP + LP K PV+ G DLK +CL + AV+SQ+ GDL ++ + ++ Sbjct: 419 SRGFVPYPVFLPLEEKKASPVIFAAGGDLKAAYCLYKKGAAVVSQYFGDLEEESVLKEYI 478 Query: 433 EALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLD 492 + + + P V D HP Y S+ +A + LP V HHHAH A+ +AEH Sbjct: 479 HSREDVSGLLKMKPTLAVCDMHPNYHSAHYAEALGLPLFKVQHHHAHIASVMAEHGL--- 535 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 VI + DG G G +G +WGGE L + L + GGD + K + Sbjct: 536 NDKVIGIAFDGTGYGTDGNIWGGEFLVCEGAQFTRAAHLSYTQVLGGDQSMKDARKTATC 595 Query: 553 QCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATL 612 L+ E + + V+ A+E +N L SS GR FDAVA+ L Sbjct: 596 YLLKSGLEG-------YITDERTEVIRAALEHKVNTVLTSSMGRLFDAVASLLDIGQVNR 648 Query: 613 SYEGEAACALEALA-------ASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRA 665 YEGE A LE A +T +T ++D + +A + RA Sbjct: 649 -YEGECAANLEREAVLAIRENIKGTELTFAITPKGEIIEVDSDPLLRAICEQKAVTDARA 707 Query: 666 WA--FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQ 721 A FH A+A + + SGGV N +L + L FT+ + Sbjct: 708 LALGFHYAVADMILNVCLRLRERYHTDRIAISGGVFQNSVLTEQTCRLLRENGFTVYYNL 767 Query: 722 SLPAGDGGLSLGQGVIAAARW 742 ++P DG +SLGQ + ++ Sbjct: 768 AVPPNDGCISLGQTYVGLMQY 788 >UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GIZ7_METPE Length = 750 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 251/763 (32%), Positives = 369/763 (48%), Gaps = 52/763 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP-ETFLVQLYQHCPPLA 69 +R+RG VQGVGFRP+V+ A LN+ G V N G VE+ D + F+ + H P A Sbjct: 8 IRVRGIVQGVGFRPYVYAAAVALNIRGTVKNIGSEVEILAIGDHFDQFVAAIR-HGPTRA 66 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 IDSV P I F+I S+ G + I PD A C CLA++ P R YRY Sbjct: 67 VIDSVTVTPLIGPAPFNNFSILTSSEGARSGMIPPDIAICDECLADITNPESRYYRYWAT 126 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 +C +CGPR++I+ +PYDR T M FP+C C EY +P RR HAQ +ACP CGP + Sbjct: 127 SCVNCGPRYSILDQLPYDRQRTTMDTFPVCEDCRAEYSNPASRRHHAQTIACPTCGPGVR 186 Query: 190 WVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +G+ +E + A A+L G+IVA+KGIGGFH+AC A L+ R R + Sbjct: 187 LYDRNGDEIGEEEPIDEAAARLAAGEIVALKGIGGFHIACT---EAAAPQLKERLGRTKQ 243 Query: 249 PLAVMLPVAD-----GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P AVM+ A + + +Q LT PIV++ K+ L +L+ +G MLP Sbjct: 244 PFAVMVTPARADRIAQINEGEQQALTGIEHPIVVLVKRDRNALKG--ISNLHTIGCMLPY 301 Query: 304 NPLQHLLL----QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 L HLL LVMTS N+ G P +A+ L G+AD FL H+R IV R Sbjct: 302 TGLHHLLFSALADHATDLLVMTSANMPGYPMITDLSEAVTHLSGVADCFLSHDRRIVNRC 361 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 DDSV+R+ G ++R SRGY P +P G + +L +GA+L + R A+ S H+ Sbjct: 362 DDSVIRD-GYLIRLSRGYAPLRTRIPLGDR---CILGVGAELNVNATIYRDGFAITSPHI 417 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLH 475 G++ + + + + + +VHD HP ++S+++A E+ V H Sbjct: 418 GNVRNPKTLQYLEQTIETLGGLLGAEYDLIVHDLHPRFLSTRFAERLGDELGAEVIAVQH 477 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AH AA E + + +DG+G G++ +WGGE + +G L +V+ Sbjct: 478 HRAHIAATTQE--------PCVGIAIDGVGYGDDRTIWGGEIFAGETLHLDRVGHLESVS 529 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 +PGGDLA + P R L + + + L + + + IN PL SS G Sbjct: 530 MPGGDLATRFPERMLYGLL--PDDTVLDLLDERGWSEVERRALQQQVAKQINTPLTSSTG 587 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQQ 653 R DA+AA LG +Y+GE A LE++AA + + D L ++ Sbjct: 588 RVLDAMAALLGICRER-TYDGEPAMVLESVAAEGTPHSWDLEYRTEDGAEVLSTRALVRK 646 Query: 654 WLNWQAPVN------------QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 N ++ A + LA+G A + A +G++ + SGGV N Sbjct: 647 AFNEYRSLDRPGTRSGQQQRADLAASIQFNLARGIAGMAVRAADEQGLSVVALSGGVAIN 706 Query: 702 RLLRARLAHYLADFTLLF--PQSLPAGDGGLSLGQGVIAAARW 742 ++R + + L F P GDG +S GQ V + Sbjct: 707 AMIRETIHTIVCKHGLTFRMNDRYPPGDGCVSFGQVVYGGKKM 749 >UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S736_FERPL Length = 745 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 245/769 (31%), Positives = 382/769 (49%), Gaps = 72/769 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ + G VQGVGFRPFV++LA+++ L G V N GDG VE+ + + E F+ +L + P Sbjct: 2 FRIIVSGVVQGVGFRPFVYRLAKEMKLRGYVKNCGDGTVEIVIDREVEEFVERLKKEIPD 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRY 126 A+I+++ E + +F I +S G T + P D A C CL E+ +RRY Y Sbjct: 62 RAKIENIRIE--KFEGFFDDFKIIESGGKTGILSLPPPDIAVCEDCLKEVFDEKDRRYLY 119 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT CG RF++ +P+DR T +A FPLC C +EY +P DRRF+AQ +ACP CGP Sbjct: 120 PFTTCTSCGQRFSVSERLPFDRENTTLAEFPLCEDCRREYENPDDRRFYAQSIACPACGP 179 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + E + G A++ A + G VAIKGIGG HL+C + V LR RP Sbjct: 180 NYELLPKGVFGV--EAVKEAARMIDSGSFVAIKGIGGIHLSCL-TENEIVWKLRKILRRP 236 Query: 247 AKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P AVM+ + + + L + PI++ K+ + +AP L+ +G+M Sbjct: 237 QQPFAVMVRDIEAAKNLAELSEEEIEELKSFRRPILVCKKRVD---LEAVAPKLDTIGIM 293 Query: 301 LPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP PL ++L + L+ +VMTS N +P A S +L+ D FL HN I R+ Sbjct: 294 LPYTPLHYILFKFLKAEAVVMTSANFPSEPMATS----FEELKVPYDAFLNHNMRIANRV 349 Query: 360 DDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSVV+ ++RRSRG+VP+ + L + + +GA+L N+ C ++ +AV+S Sbjct: 350 DDSVVKFVNGRRMIIRRSRGFVPEPIELDIKSEA----VAVGAELYNSLCFLKEGKAVMS 405 Query: 417 QHLGDLSDDGIQ-MQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLPTQ 471 Q++G+ ++ ++ AL +N D P++VV D HP Y +S ++ E+ Sbjct: 406 QYIGNTANFKTFNEFFKRALFHFKNYLDLKPEFVVADMHPLYNTSIFAEKFGEEIGAEVL 465 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLG 529 V HH AHA + +AE + + IA+ +DG+G G +G +WGGE L + + E E +G Sbjct: 466 KVQHHFAHAFSVMAEKKI----DEAIAIAVDGVGYGMDGKIWGGEVLYINLDSMEFERVG 521 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS--ETASVQQQNWSVLARAIERGIN 587 L + L GGDLA ++P R L + W+ E + +++ +++ I Sbjct: 522 RLETIHLLGGDLAVERPLRVLFSIIYSQTGSWEELKYYEKYLKKGESFETFEELLKKRIG 581 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD----- 642 ASS GR DA +A L +YEGE A LEA+A P+ + Sbjct: 582 VVEASSAGRVLDAASAMLEICFER-TYEGEPAMKLEAVAEESENYYDPIIETSWEISKFS 640 Query: 643 ------------NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMR 687 L + ++ L + A+ LA+G + + E Sbjct: 641 SPFDGRGRRGEVKVLKIGEVFEDALKRYLSGERRGKIAYQIMSYLARGLSEIASEFEA-- 698 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 L+ SGGV +N + + + + + GD G+SLGQ Sbjct: 699 ---PLIVSGGVAYNSIFQKEI-----GRNFYTNELVACGDNGISLGQVY 739 >UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXT8_9CORY Length = 760 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 272/766 (35%), Positives = 365/766 (47%), Gaps = 71/766 (9%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQL 61 T +L I G VQGVGFRP Q A+ + G V N GV V + P+ L + Sbjct: 27 TVVRKRLTIYGVVQGVGFRPHAVQKARLHAVTGWVTNTDAGVIVEAQGAPDEVDRALADI 86 Query: 62 YQHCPPLARIDSVEREPFIWSQLP-TEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTP 119 PPLA I + + F++ S GT T + PD C C E + P Sbjct: 87 TTDLPPLAFISYTNVQSITPINGENSSFSVIPSHRDGTAKTLLPPDTTMCEDCRREFHDP 146 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRY YPFI CT+CGPR TIIR +PYDRP T MA FPLCP C++EY DP +RR+HAQP+ Sbjct: 147 ENRRYHYPFITCTNCGPRLTIIRDLPYDRPRTTMAEFPLCPDCEREYTDPDNRRYHAQPI 206 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKM--------GKIVAIKGIGGFHLACDAR 231 +C ECGP + E + + LK G IVA+KGIGGFHL CDAR Sbjct: 207 SCYECGPTAWLEYDEPNLAPEKLTRENVETLKEKVSKLFDSGAIVAVKGIGGFHLMCDAR 266 Query: 232 NSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 N V LR RK RP KP AVM+P P A AAPI LV+ P L + Sbjct: 267 NEETVEKLRQRKQRPDKPFAVMVPRTSE-PQTA-------AAPIELVNDFDEP-LAPSVN 317 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ-----GIAD 346 P L+ VG+ P +PL L+ PLV TSGNLS +P +N+ A L +AD Sbjct: 318 PRLSRVGIFSPYSPLHELICDR---PLVATSGNLSSEPLITTNDDARRFLGPAARRPLAD 374 Query: 347 GFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 L+H+R I ++DSVV +RRSRG+ P + LP + VL +G D+KNTF Sbjct: 375 ALLLHDRPIHLPVEDSVVLGR-LPIRRSRGFAPLPVQLPGTRR----VLAVGGDMKNTFT 429 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE- 465 L A +S H+G++ + +R +L ++ + P+ +V D HP + ++ A E Sbjct: 430 LTTSSFAHVSPHIGEMHSLAARKAFRTSLAQLRALTGADPELIVCDMHPDFATADIADEL 489 Query: 466 ---MNLPTQTVLHHHAHAAACLAEH-------QWPLDGGDVIALT-LDGIGMGENGALWG 514 + +P V HHHAHA + LAE+ P +A+ LDG G G + +WG Sbjct: 490 ALSLGVPLVAVQHHHAHALSLLAENPALYRADSGPQTPTPTVAVATLDGTGYGTDATIWG 549 Query: 515 GECLRV--NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ 572 GE L + + LP L GGD A K P R L C + + A + Q Sbjct: 550 GEILLLGPDRTTFTRAWHLPTFRLVGGDAAVKSPHRIALGLCRDW-----GLASPAPIPQ 604 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 S ++R I SS GR FDA A +G ++YEG+AA EALA + Sbjct: 605 VELS-----LDRDIGTVRTSSLGRLFDACAYLIGLVQDHVTYEGQAAMEFEALALTNKKQ 659 Query: 633 THPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 T Q+ L P + A FH A+ + ++ G Sbjct: 660 VSTCATT-------PKTAVQELLADPNPA-RAAARFHLAIGRIIG----KELKATGADVF 707 Query: 693 VFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 SGG N+LL + + + L+ +P GDGGLSLGQ + Sbjct: 708 GVSGGCAANQLLVSAIKDEVGTENLITHHIVPPGDGGLSLGQALYG 753 >UniRef50_O28905 Hydrogenase expression/formation regulatory protein (HypF) n=1 Tax=Archaeoglobus fulgidus RepID=O28905_ARCFU Length = 740 Score = 791 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 269/776 (34%), Positives = 396/776 (51%), Gaps = 76/776 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ +RG VQGVGFRPFV ++A ++ L G V N GDG VE+ + +PE FL L + PP Sbjct: 2 FKITVRGVVQGVGFRPFVHRIASRMGLRGYVRNTGDGSVEIVVDRNPEEFLNILLKERPP 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 L I+ ++P F I +S G ++ + PD A C CL E+ RRY YP Sbjct: 62 LVVIEDFSVAK-TNGEIPETFRIVESGGKSLLSLPPPDVAVCDKCLEEVLDSKNRRYLYP 120 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F +CT CGPRFTI +++P+DR T +A FPLCP C KEY D DRR+ AQ +ACP CGP Sbjct: 121 FTSCTDCGPRFTISKSLPFDRENTSLADFPLCPDCRKEYGDIKDRRYFAQTIACPRCGPQ 180 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 +V G E + A L GKI+AIKGIGG+H+AC + V LR +RP Sbjct: 181 YRFVWKGG----EGGIGDAANALDSGKIIAIKGIGGYHIACL-TEDDVVLRLRKLLNRPQ 235 Query: 248 KPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 +P AVM+ L + R L +PA PIV+V KK + +AP+L+ +G+ML Sbjct: 236 QPFAVMVRDLSSAERVAELSNEERAELLSPARPIVVVRKKLPF---EAVAPELDTIGIML 292 Query: 302 PANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P PL HLL QEL+ LVMTS NL G+P I E + ++ DGFL+HN +I R+D Sbjct: 293 PYTPLHHLLFQELKADYLVMTSANLPGEPMYID-ESIMEKME--LDGFLVHNLEIANRVD 349 Query: 361 DSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ G ++RRSRG+VP + + GF + +GA+L N+ L++ +AV+SQ Sbjct: 350 DSVVKYVGGRRLLIRRSRGFVPQPIKIDIGFNA----IAVGAELYNSIALLKEGKAVVSQ 405 Query: 418 HLGDLSDDGIQ-MQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAR----EMNLPTQ 471 ++G+ ++ ++ A++ + Y++ D HP + ++ +A E++ Sbjct: 406 YIGNTANFRTYNEFFKRAVKFFARYMNLEKIDYIISDMHPLFNTTNFAEKLSKELSCRHI 465 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR--ECEHLG 529 V HH AHA + +AE +A+T+DG+G G +G +WGGE L ++ E G Sbjct: 466 KVQHHFAHALSVMAEKGL----ERAVAITVDGVGYGMDGKVWGGEVLLIDLEKGRFERRG 521 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 L L GGD A +P R ++ L+ ++Y + ++ L +A+ A Sbjct: 522 RLETFGLIGGDAATYRPLRIAVS-LLKRHELLEHY-----CKYEDVERLIKALP---LAV 572 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN------ 643 +S GRF DAV+A L +YEGE A LEA A P R + Sbjct: 573 KTTSVGRFLDAVSAMLEVCLER-TYEGEPAMKLEAAAEPHEVEVKPEIERRRETCVYNSP 631 Query: 644 -----------QLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 L L F+ + + + A+ +A+G + + A Sbjct: 632 FDTEGRQGEIKVLMLRDFFTRCMERYLEGEGRGKIAYEAIAYVARGLGEIALDAARNC-- 689 Query: 690 TTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 ++ SGGV +NR + + + P P GD G+SLGQ I A + L G Sbjct: 690 -KILISGGVGYNRYFLREVERVCGEIVV--PSLYPLGDNGISLGQ--IYALKALEG 740 >UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncus mulieris RepID=C2KSY0_9ACTO Length = 872 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 287/873 (32%), Positives = 386/873 (44%), Gaps = 144/873 (16%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLN--LHGDVCNDGDGVEVRLREDPE---TF 57 NT + + G VQGVGFRP V ++A + L G ND V + + + F Sbjct: 2 DNTVVRRRWILTGIVQGVGFRPHVARVASRFGAGLTGFCGNDSLSVFIEAQGELSVLRAF 61 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEM 116 + + PPL+ + + EF I S GG T I PD + C ACLA++ Sbjct: 62 IAAVVDEAPPLSYVMRCQETTIDVVDSENEFRIVASRGGVGARTLIPPDVSLCAACLADI 121 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 PG RRY Y F CT+CGPR +II +PYDRP T M FPLC AC EYRDP DRRFHA Sbjct: 122 RDPGNRRYGYAFTTCTNCGPRLSIIEDLPYDRPQTTMRDFPLCAACAAEYRDPGDRRFHA 181 Query: 177 QPVACPECGPHLEWVSHGE---------------------------HAEQEAALQAAIAQ 209 QP++C +CGPHL V+ E AEQ+A L AA A Sbjct: 182 QPISCYDCGPHLWLVAASELPTGLADPFSSQDLGVDLVDGSRGGRSPAEQDAVLDAAAAD 241 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLP---------VADGL 260 L+ GKIVA+KG+GGFHL DA N AV+ LR RKHR KPLAVM+ D Sbjct: 242 LRSGKIVAVKGLGGFHLLVDATNETAVSRLRRRKHRDGKPLAVMVADFAAARALVDIDTP 301 Query: 261 PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 + QLL +PA PIVL + + +AP L+ +GVML PL LLL+ + P+V Sbjct: 302 ENPIAQLLLSPAHPIVLAVRHGA-AIAPSVAPGLDNLGVMLAYTPLHLLLLERVGRPVVA 360 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM---------- 370 TSGNLS +P +N AL L IAD FL+HNR I ++DSV+ + Sbjct: 361 TSGNLSSEPLCYTNADALRRLGSIADTFLLHNRGIAVPVEDSVIMAAPLTLPSSLSLKTA 420 Query: 371 ---LRRSRGYVPDALALPPGFKNVPP-------------VLCLGADLKNTFCLVRGEQAV 414 +RRSRGYVP LP P +L +G +LKNTF LVR A Sbjct: 421 FLPVRRSRGYVPLPFPLPEKPSRDPASQPCISVNQVNPVILGVGGELKNTFTLVRDGLAF 480 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-------- 466 S HLGD+ Q+ + +A+ + I+ P V+ D HP Y ++ WA Sbjct: 481 TSAHLGDMGSLASQLAYEKAIGQLTKIHREHPTIVIRDLHPNYATTAWAERYVASARDSG 540 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 L + HH AHA + LAE + P I + +DG G G++ +WG E V+ Sbjct: 541 RTLRLLALQHHRAHALSLLAETRVP----RAIVIAVDGTGYGDDAKIWGSEVFLVDTSRV 596 Query: 526 E--------HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L LP LPG DLA ++PWR +A + Sbjct: 597 AAQGEAGVPRLAHLPYFPLPGADLAVREPWRQAVALLRSLGLSATGLPLESRWCSSLGQT 656 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV- 636 + ++ G ++P + + GR+FDAVAA LG + S+E A A++ A Sbjct: 657 VLSQVDSG-SSPWSCALGRYFDAVAALLGLCEIS-SHEAAAPVAVQTAARRWQAENPLAA 714 Query: 637 ----------------------------------------------TMPRVDNQLDLATF 650 T+P +L +A Sbjct: 715 AQIVHSYLFQLGSALSDGPVVAQWTASPPPQTGVSCEAAASQSGIGTVPPAARELPMAGI 774 Query: 651 WQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 + + + A+ FH +A+ FA A +GG N LL Sbjct: 775 ITELVAGIKAGICPGELAFRFHVVVAKLFATTTCALAAEYECAAAGITGGSALNSLLTEL 834 Query: 708 LAHYLADFTL--LFPQSLPAGDGGLSLGQGVIA 738 + + + L L Q +PA DGGLSLGQ Sbjct: 835 IGAAVKEHGLTWLTHQRIPANDGGLSLGQAFYG 867 >UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Actinomycetales RepID=Q0RPQ5_FRAAA Length = 824 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 310/796 (38%), Positives = 395/796 (49%), Gaps = 72/796 (9%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPPLAR 70 G VQGVGFRP V +LA L L G V ND V + DP FL +L PPLAR Sbjct: 26 EGIVQGVGFRPHVHRLASGLGLTGFVGNDSASVFAEVDGDPADVAEFLRRLAPSAPPLAR 85 Query: 71 IDSVEREPFIWSQLPTE--FTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRYRYP 127 ID + + P F I S T + PDAA C CL E+ P +RR+R+P Sbjct: 86 IDGITVTDVPGTPRPGGAGFRIVASRAAAGARTLVPPDAAVCADCLRELFDPADRRHRHP 145 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FI CT+CGPRFTII A+PYDR T MA FP+C C EY DP DRRFHA+P+ACP+CGP Sbjct: 146 FITCTNCGPRFTIIEALPYDRAATTMARFPMCARCTAEYTDPADRRFHAEPIACPDCGPR 205 Query: 188 LEWVSHGEHAEQ--EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 L + A +AAL AA L G +VA+KG+GG+HLAC A + + LR RK+R Sbjct: 206 LWFSPLDGPAVTGTDAALAAAQRALAAGAVVAVKGVGGYHLACRAEDDEGLTRLRGRKNR 265 Query: 246 PAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P +P AVM + A LL+ PAAPIVL + L +AP VG+ Sbjct: 266 PDQPFAVMARDLATAARVGTVSPAVAALLSGPAAPIVLTGRAPGAPLSALVAPGSPLVGL 325 Query: 300 MLPANPLQHLLLQELQCP------LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 +LP PL HLL LVMTS N SG+P + +A L G+AD FL H+R Sbjct: 326 LLPYTPLHHLLFAPAPGGGPPPRLLVMTSANRSGEPICFDDREARTRLAGLADAFLTHDR 385 Query: 354 DIVQRMDDSVVRESGEML---RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I+ DDSV+R E + RR+RG+VP + LP + V PVL +G +LKNT CL G Sbjct: 386 PILAPCDDSVLRCDAEQVVPLRRARGHVPLPVDLP---RPVGPVLAVGGELKNTLCLTTG 442 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--- 467 +A+LSQH GDL + + + +Y P + D HPGY + WAR Sbjct: 443 RRAILSQHHGDLGSLAAMAAFERSGARLARLYGIEPAVLAADPHPGYATRAWARRTAGAE 502 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYREC 525 P + V HHHAH AA LAEH G V+ + DG G G++G +WGGE L V + Sbjct: 503 RPLRLVQHHHAHVAALLAEHG--RLGEPVVGVAFDGTGYGDDGTIWGGEVLLVGSDVTRA 560 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIER 584 E + L V LPGGD A + P R LA W + + + S + A++R Sbjct: 561 ERVAHLRPVGLPGGDAAVRNPCRVALAHLAAAGLAWSADLAPVRACSAAELSTVRTALDR 620 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL----------EALAASCHGVT- 633 G+ +SS GR FDAVAA LG T +Y +AA L E LAA G T Sbjct: 621 GVACTPSSSMGRLFDAVAALLGVRQRT-TYAAQAAVELEALAAEAPTAEGLAAGRSGDTG 679 Query: 634 ------------------HPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDAL 672 P+ D L+ A L A AFH A+ Sbjct: 680 GPSAGTAAAGRAAAGVGAWPLVFGLADGVLEPAPVLAGLVDGLRAGMAAGTLAGAFHVAV 739 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHN--RLLRARLAHYLADFTLLFPQSLPAGDGGL 730 A + G+ + +GGV N L R A F +L Q +PAGDGGL Sbjct: 740 ADAVTRVAEVARRRHGVGLVGLTGGVFANVVLLRACRARLAAAGFDVLVHQEVPAGDGGL 799 Query: 731 SLGQGVIAAARWLAGE 746 +LGQ V+AA LAG+ Sbjct: 800 ALGQAVVAA---LAGD 812 >UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 Tax=Heliobacteriaceae RepID=B0TCN1_HELMI Length = 844 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 272/655 (41%), Positives = 354/655 (54%), Gaps = 39/655 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 +N + + I G VQGVGFRPFV++LA +L L G V N GVEVRL E FL Sbjct: 4 GENANQARMVLITGTVQGVGFRPFVYRLATRLGLAGWVQNGAKGVEVRLEGALGSIEAFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-----GTMNTQIVPDAATCPACL 113 L PPL+RID ++ L F+I S + ++ PD A CP C Sbjct: 64 QALKAEAPPLSRIDRIQVREAPVEGL-RLFSIAVSDAPDRTADVAHARVPPDVALCPECR 122 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 EM+ P +R Y YPF NCT+CGPRFTIIR +PYDR T MAAFP+CPAC ++Y DPLDRR Sbjct: 123 REMDDPADRHYGYPFTNCTNCGPRFTIIRQVPYDRAQTSMAAFPMCPACRRDYDDPLDRR 182 Query: 174 FHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 FHAQP ACP CGP + + ++ ++ G IVA+KG+GGFHL CD RN+ Sbjct: 183 FHAQPTACPLCGPRVWFAGSDGQEVIGDWVRLFRDSIRQGNIVALKGLGGFHLVCDGRNA 242 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 A+A LR RK RPAK LAVM + D L+ P APIV+++++ L Sbjct: 243 TAIAELRRRKRRPAKALAVMGRDLTTLRRICRISDREAAALSGPEAPIVVLERREDAALP 302 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 ++AP + +G MLP PL HLL E LVMTSGN G P N AL L GIAD Sbjct: 303 SNLAPGTHTLGAMLPYTPLHHLLFDESLDLLVMTSGNPGGLPLVRDNRLALTQLSGIADA 362 Query: 348 FLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALP-PGFKNVPPVLCLGADLKN 403 F+ H+R+IV R DDSVVR ++ + RRSRGYVP+ + +P P K +L +GA++KN Sbjct: 363 FVFHDREIVSRADDSVVRVIDDTLQFYRRSRGYVPEGIPIPWPEGKKDRTLLAVGAEMKN 422 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 F L A LSQH+GD+ + + E+LR ++ + D +PQ V D HP Y + A Sbjct: 423 AFALFGRGAAYLSQHIGDVDTCEGRDNYLESLRNLERLLDLSPQRVARDCHPQYRMTALA 482 Query: 464 REM--------------NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN 509 E+ LP + HHHAH AA LA++ + G I + LDG G GE+ Sbjct: 483 EEIAFGDGAPTGRSEISALPIDDIQHHHAHLAAVLADNG---ETGPAIGVILDGTGFGED 539 Query: 510 GALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSET 567 G + G E L + R+ L V LPGG+ A ++PW A E W Sbjct: 540 GMIRGFEILTGDLRDYRRHFWLRPVPLPGGEAAIRRPWLTAAAFLGEAFGEAGWSQAKAL 599 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + R E+ +N L SS GR FDAVAA LG SY+G+AA L Sbjct: 600 FPDRAAMVEKARRMAEKRLNTTLVSSAGRLFDAVAALLGLCWEN-SYDGQAAIEL 653 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Query: 643 NQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 ++D L PV A FH+ +A+ A GI + GGV Sbjct: 739 GEIDFGPLLSALLHDREAGVPVEVMASRFHNTIARMAEAAASVLREESGIQRVALGGGVF 798 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 N L L F +L P+ +PA DGGL+LGQG I+ R Sbjct: 799 QNPYLFTLTRRLLVRRGFFVLVPRHVPANDGGLALGQGAISLWR 842 >UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z839_PHOPR Length = 745 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 259/746 (34%), Positives = 369/746 (49%), Gaps = 50/746 (6%) Query: 35 LHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIR 91 + G V ND +GV++ ++ E+ + F+ L PPL+RID V P Q+ T F I+ Sbjct: 1 MAGSVINDSEGVKIDVQGKLEELDVFISDLTLQAPPLSRIDQVAVWPRPLHQV-TSFCIK 59 Query: 92 QSTGGTMNTQ-IVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPF 150 QS G + + + PD C C A++ R YRYPF NCTHCGPR+TI+ A+PYDR Sbjct: 60 QSKGRALTSVCLSPDQGICKECRADIADSASRYYRYPFTNCTHCGPRYTIVEALPYDRAV 119 Query: 151 TVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIA 208 T M +F LC C + Y++PLDRR+HAQP++C CGP + +VS A Q A+ Sbjct: 120 TGMRSFSLCQPCQQAYQNPLDRRYHAQPISCEHCGPSVRYVSGSGKVLAHQALAIDKTAK 179 Query: 209 QLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPD------ 262 L+ G IVAIKG+GGFHLAC+A NS+AV LR K R KP A+M+ + Sbjct: 180 TLQRGGIVAIKGLGGFHLACNASNSDAVTRLRQIKRRQRKPFAIMVADGNAAKQLVWGEA 239 Query: 263 AARQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 +L + +PIVL+ KK VP+ L ++AP + +GV+LP PL LLL+ L +V+ Sbjct: 240 KEWDMLHSQPSPIVLMKKKAVPQSYLAANVAPSVPYLGVILPYTPLHVLLLEHLDQAIVL 299 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGY 377 TS N SG P A ++ G+ DG L HNR IVQ DDSVV +G +LR +RGY Sbjct: 300 TSANGSGMPIATEYDEVYDQFDGLIDGVLDHNRPIVQACDDSVVHFAGGKRRVLRMARGY 359 Query: 378 VPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRL 437 P + G + P+L +GA K L +Q +LS +GD+ D Q ++ + +R Sbjct: 360 APYS---QAGNGSEWPILAMGAQQKAAIGLSLAQQWILSPFIGDIDDLDTQHRYLDVIRH 416 Query: 438 MQNIYDFTPQYVVHDAHPGYVSSQWARE------MNLPTQTVLHHHAHAAACLAEHQWPL 491 +++Y P ++ D HPGYVS+Q+A E + V HHHAH A +AEH+ Sbjct: 417 FESLYQVEPTQIICDRHPGYVSTQYAIERQQLASQAITLHQVQHHHAHVLAVMAEHKI-- 474 Query: 492 DGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLL 551 V+ DG G G++G +WGGE L + + E + L L GGD A K P R + Sbjct: 475 -NQTVLGFAFDGTGWGDDGTVWGGEVLLSSSQHFERVFHLRPFRLLGGDRAIKSPARIVF 533 Query: 552 AQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGC 607 A L + + L + G ++P SS GR DA A+ LG Sbjct: 534 AMLLECYSLNDIKRMELAVFKRWSESKMDNLFLLWQSGNSSPYTSSMGRLIDAWASLLGL 593 Query: 608 APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQ---- 663 ++ YEGE LE A + G N +D L+ A Sbjct: 594 VD-SVDYEGECGLLLEQAALAATGSVAMEFHLTKTNMIDWQPLLDNALSLIAAAPSDLSS 652 Query: 664 ---------RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD 714 L + A ++ A +V SGGV NR+L + L+ Sbjct: 653 DTQSGTWSLLVTFLSRGLFEAIAHNIKMVAATFPAYPVVLSGGVFQNRVLLDLVYQQLST 712 Query: 715 FT--LLFPQSLPAGDGGLSLGQGVIA 738 T + +++P DGG++ GQ A Sbjct: 713 LTNSIYCGETVPVNDGGIAAGQLWYA 738 >UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S327_ALTMD Length = 768 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 259/762 (33%), Positives = 387/762 (50%), Gaps = 43/762 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 K+ + +L I G +QGVGFRP V+ LA + ++ G V ND V + D E F+ Sbjct: 12 NKSKTIAYELNITGVIQGVGFRPLVYCLAYEKSIVGWVQNDCGCVRIHAEGTELDVEQFV 71 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT--MNTQIVPDAATCPACLAEM 116 L + L I +E++ S + + FTI++S I D C AC AE+ Sbjct: 72 FDLLNNG-SLVSISLLEKKQVKLSNVDS-FTIKESGHDIACGAISIPKDVYLCGACKAEL 129 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 + RR Y FI C+ CGPRF+++RAMPYDR M+AFP+C C KEY+ P DRRFHA Sbjct: 130 LSNTNRRGTYSFIACSKCGPRFSMLRAMPYDRKNMSMSAFPMCELCRKEYQSPTDRRFHA 189 Query: 177 QPVACPECGPHLEWVSHGEHAEQEAALQAAIAQ---LKMGKIVAIKGIGGFHLACDARNS 233 QP++C CGP + + G + + L GKIVA+K IGG+HL CDA+++ Sbjct: 190 QPISCRVCGPEVFCSTVGGRVVSQGDVDVVATVVAYLNQGKIVALKSIGGYHLLCDAQST 249 Query: 234 NAVATLRARKHRPAKPLAVMLPV--ADGLPDA-----------ARQLLTTPAAPIVLVDK 280 AV LR RK+RP KP AVMLP AD + R LL +P PI+L K Sbjct: 250 EAVDLLRQRKNRPDKPFAVMLPEPRADETSEDWLDKCVAVDSHQRALLLSPVRPILLAKK 309 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + + D++AP L ++GVMLP + L L++Q+ P+V TSGN+ G+P S A Sbjct: 310 QSNVPIADNVAPMLRDLGVMLPCSGLHLLIMQQFNRPMVATSGNIYGEPMVTSTSSAQQH 369 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L +AD F+ HNRDI ++DDSV+R +R RG P + L + P+L + Sbjct: 370 LSMLADIFVHHNRDIFHKLDDSVLRTLKSGTIPIRLGRGISP--IELSLPYTVQEPMLAV 427 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA+ KNT + + +++ H+GDL +Q + + + Q +Y PQ ++ D+HPGY Sbjct: 428 GANQKNTVAIALNNRLIVTPHIGDLDSPIMQAHFEKCISDFQALYHVHPQRILCDSHPGY 487 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 +SS+WA+ LPT V H A A + DG G+GENG +WGGE Sbjct: 488 ISSRWAKGSELPTTKV---LHHHAHASAWALAAEISTPSLVFVWDGTGLGENGEMWGGEV 544 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 + + L + L GG+ QPWR+ + ++ Q S Sbjct: 545 FCGTPGNWKRVASLAPMKLQGGNKVPNQPWRSAASLVWGTNFTGIDFKP---FDPQQLS- 600 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 A + +N ++SS GR FDA A A C + +SYEG+A LE++A++ V P+T Sbjct: 601 -YNAWQNELNCHVSSSMGRLFDAAAFAC-CEQSEVSYEGQAPMMLESVASTPSKV-MPLT 657 Query: 638 MPRVDN---QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 + + ++ Q+D T + +++ RA FH +L + + + Sbjct: 658 LVQKNDEFIQMDWRTLVPELFDFKVSPQTRAANFHASLIETVWEVTLHCRKKFNFDHIGL 717 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 +GGV NR+L ++ +D ++ P SLP D +S+GQ Sbjct: 718 AGGVFQNRILCDGISQRFLQSDIPVVIPSSLPLNDAAISVGQ 759 >UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfurococcaceae RepID=A3DKG9_STAMF Length = 778 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 245/775 (31%), Positives = 366/775 (47%), Gaps = 49/775 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPET---FLVQL 61 + I G VQGVGFRPF+ +LA + L G V N G VEV + PE+ F+ L Sbjct: 2 VVAKKFIIIGLVQGVGFRPFIHRLAVKHGLKGYVRNIGGSEVEVWVEGSPESIDKFIEDL 61 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 Y PP A I+ V E ++ S + I PD A C CL E+ P + Sbjct: 62 YVEKPPPAIIEDVFIEDVEPRGYVDFHILKSSREAVKRSNIPPDLAICKDCLREILDPND 121 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVA 180 RRYRY F +C CGPRF++I +PYDR T M+ + LC C+KEY D + RR+HAQ ++ Sbjct: 122 RRYRYAFNSCAWCGPRFSMIYRVPYDRSNTSMSKYILCSECEKEYHDIRNVRRYHAQGIS 181 Query: 181 CPECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 C GP L ++ E+ E + + G IV +KG+GG+H+A A + V L Sbjct: 182 CSVDGPKLYLYTNDWEYVETRDPIIETAKLIDEGYIVGVKGLGGYHIAALATSDGVVLKL 241 Query: 240 RARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHRP KP A+M L + + AR +L +P API+L+ K+ + ++P Sbjct: 242 RKRKHRPTKPFAIMGLDISVLERLVYIDEEARSILESPQAPILLLPKREDSPVSKYVSPG 301 Query: 294 LNEVGVMLPANPLQHLLL-QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ GV + L +LLL + L+MTSGN++G+P I+ E A L + D FLIH+ Sbjct: 302 LSHEGVFVAYTGLHYLLLMETRDKFLIMTSGNVTGEPMCINEECAREKLSRVVDYFLIHD 361 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+IV R+DDSV+R + LRRSRGY P + + + GADL NT L Sbjct: 362 REIVNRVDDSVLRNTNGKWVFLRRSRGYAPMWIRIRSDLDG--EYIAFGADLNNTGALGF 419 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQ----WA 463 ++ VL+Q++GDL Q + + + Y V+ D HP Y S + +A Sbjct: 420 EDKVVLTQYIGDLDSFNAQRELLKYIGFFIENYRINLDKTIVIVDKHPSYHSRRLGMEFA 479 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--N 521 + LP V HH+AH ++ G+V+ + +DG+G G++ +WGGE L + Sbjct: 480 EKHRLPIIEVQHHYAHVLGTAYDNGLE---GEVLGIAMDGLGWGDDNTIWGGEILVFNTD 536 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNW------ 575 + + LG + + L D P R L ++ + +N Sbjct: 537 KYDYKRLGHIEKLPLTS-DRDTIYPLRILAGYLSSRGHVFEEIHKLIKNVLENIDHRLVA 595 Query: 576 --SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC--HG 631 ++ + ++ G ASS GRF D ++A LG SYEGE A LEA+A H Sbjct: 596 EMELVHKLVKAG-RYIEASSTGRFLDMISAILGVCLYR-SYEGEPAIKLEAVADKAKSHK 653 Query: 632 VTHPVTMPRVDN--QLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQATM 686 + + + L+ + + V + A + + L + Sbjct: 654 LLEHFHISTHNGLYVLEYKDLIEHLIYNNVRDNSVAETAKSILYSYGYWMGKLAHKLIKG 713 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAA 739 R I +V SGG N + L L + L L P+ +P D G+S GQ + + Sbjct: 714 RRIDHIVVSGGAAVNTYIIKGLEDSLGEHDLEPLLPRRIPPNDEGISFGQVIAGS 768 >UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAA4_IGNH4 Length = 736 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 266/757 (35%), Positives = 366/757 (48%), Gaps = 44/757 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGV-EVRLREDPETF--LVQLYQH 64 ++ +RG VQGVGFRP V +LA+ L L G V N G E+ + + E + L + Sbjct: 3 AKRIVVRGLVQGVGFRPQVARLARGLKLKGYVKNVAGGAAEIYVIGEDEKISKFINLLKK 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERR 123 PP R++ ++ E +F I +S + ++QI PD C CL EM P RR Sbjct: 63 LPPPIRVEDLQAEDAEEMS-FDDFIILKSDKSSYKHSQIPPDLGICEDCLREMLNPFSRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YP I+C CGPRF++IR++PYDR T MA FP C C++EYRDP D R+H Q AC + Sbjct: 122 YMYPLISCAKCGPRFSMIRSLPYDRENTSMAEFPFCAECEREYRDPWDPRYHVQGFACAK 181 Query: 184 CGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + + G ++ A L G I+A+KG+GG+HLA A VA LR R Sbjct: 182 CGPKVRLLDSEGRTVLVRDPIKEAAKLLDEGFIIAVKGMGGYHLAAKATEDEVVAELRRR 241 Query: 243 KHRPAKPLAVMLPVADGLPDA----ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 K RP KP A+M ++ +L +P APIVL K+ L + +AP VG Sbjct: 242 KGRPRKPFALMALNSEVANRIVVVDDEELFNSPEAPIVLFRKREDGPLSELVAPGHALVG 301 Query: 299 VMLPANPLQHLLLQE-LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 VM L +LLL +MTS N SGKP I+ E AL G+AD L H+R+IV Sbjct: 302 VMRAYTGLHYLLLNYTADKFSIMTSANPSGKPTCITKECAL----GMADYVLEHDREIVH 357 Query: 358 RMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R+DDSVVR S LRRSRGY P L + V GA+L+N + + V Sbjct: 358 RVDDSVVRRSAGERLFLRRSRGYAPAWLEADEELLSGASV---GAELQNAGGISFSNKVV 414 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLPT 470 L+Q++GD + E LR + Y TP++V D HP Y S A E Sbjct: 415 LTQYIGDTDEYDNLRFMEEELRWLLKQYSVTPEFVAADLHPRYSSKLLALSLAEEFGAEL 474 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAHAA+ +AE + + +DG G G +G WGGE LRVN + E + Sbjct: 475 VEVQHHHAHAASVMAEARLEEAAA----IVVDGTGYGLDGNSWGGEVLRVNREDFERVAH 530 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGI 586 L LPGGD A K P R L+ + + + + + V + + R Sbjct: 531 LEYFPLPGGDRAVKYPARALMGLLYAAGEDLEKWKGKLARALPGGEGEFEVARKVLGR-- 588 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 + L SS GR DA AA LG A SYEGE A LEA + +T + +D + Sbjct: 589 -SVLTSSLGRTLDAFAALLGVAYER-SYEGEPAMLLEAASLGGKPLTK---LDLIDGNVI 643 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 T +W ++ + M +A G+ +V SGG N Sbjct: 644 KVTELLRWAVEALDSGKKLRDVAFTIQYNLGYNMALKAAELGL-PVVVSGGAAVNEPFLL 702 Query: 707 RLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + + L P +P GDGG++LGQ +IA+ + Sbjct: 703 GVKEVVK---PLLPHKVPPGDGGIALGQLIIASRKLK 736 >UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 Tax=Bacteria RepID=Q2JE38_FRASC Length = 848 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 294/811 (36%), Positives = 386/811 (47%), Gaps = 100/811 (12%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLARIDSVEREP 78 FRP+V +LA L L G V ND V + D FL +L PPLARI+ V Sbjct: 31 FRPYVHRLAGTLGLAGFVGNDSTSVFAEVEGDEVAVAEFLRRLEPQAPPLARIERVTVTS 90 Query: 79 FIWS-QLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGP 136 S F I + T + D A C CL EM P +RR+R+PFI CT+CGP Sbjct: 91 VTRSTAGDAGFRIVAGATVPGDRTLVPADTAVCADCLREMFDPTDRRHRHPFITCTNCGP 150 Query: 137 RFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH 196 R+TII A+PYDR T MA FP+C C EY DP DRRFHA+PVACP CGP L + Sbjct: 151 RYTIISALPYDRAATTMARFPMCARCAAEYADPADRRFHAEPVACPSCGPKLWFSPADGT 210 Query: 197 AEQ----EAALQAAIAQLKMGKIVAIKGIGGFHLACDARN-------SNAVATLRARKHR 245 + +AAL AA L G +VA+KG+GG+HLAC A N A+A LRARK R Sbjct: 211 GPEVHGTDAALAAAQRALADGAVVAVKGVGGYHLACSAENDPGDTAGDTALARLRARKDR 270 Query: 246 PAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYV------PELCDDIAPD 293 P KP AVM+ L A LL +PAAPIVLV + + +AP Sbjct: 271 PDKPFAVMVRDLATAALVADLSSAEAALLASPAAPIVLVRRSPAAGMSGISGMSRLVAPG 330 Query: 294 LNEVGVMLPANPLQHLLLQ-------ELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 VG++LP P+ HLL LVMTSGN SG+P +++ A L G+AD Sbjct: 331 TPLVGLLLPYTPVHHLLFAPVPGGGPRPPRMLVMTSGNRSGEPICFADDDARDRLAGLAD 390 Query: 347 GFLIHNRDIVQRMDDSVVRESGE---------MLRRSRGYVPDALALPPGFKNVPPVLCL 397 FL H+R I+ DDSVVR +RRSRGYVP + L + V VL + Sbjct: 391 AFLRHDRPILLPCDDSVVRCGYGDDGDDGQVLPVRRSRGYVPLPVDL---GRPVRSVLAV 447 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G + K+TFCL +A +SQHLGD+ + + + ++Y P+ + D HPGY Sbjct: 448 GGEGKSTFCLTTDRRAFVSQHLGDMGSLAALRAFERSAAHLTDLYGVAPETLAADLHPGY 507 Query: 458 VSSQWAREMN-----------------------------LPTQTVLHHHAHAAACLAEHQ 488 V+ WA LP V HHHAH AA LAEH Sbjct: 508 VTRAWAERAAATGTEQAAAGDPAAGANQTSTHGSRSAGRLPHL-VQHHHAHVAALLAEHG 566 Query: 489 WPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLGGLPAVALPGGDLAAKQP 546 D ++ + DG G G +G +WGGE L V + E + L + LPGGD A + P Sbjct: 567 RLGDT--ILGVAFDGTGYGLDGTIWGGEVLLVGPDVARAERVAHLRPIGLPGGDAAVRNP 624 Query: 547 WRNLLAQCLRFVPEWQ-NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAAL 605 +R LA +W + + + L A++RG+ +S GR FDAVA+ L Sbjct: 625 YRVALAHLAAADLDWTADLAPVRACSVAELRTLRTALDRGVACVPCTSMGRLFDAVASLL 684 Query: 606 GCAPATLSYEGEAACALEALAASCHGVTHP------------VTMPRVDNQLDLATFWQQ 653 G ++YE +AA LEALAA+ G ++ + LD Sbjct: 685 GVR-HRITYEAQAAVELEALAAAEFGGAGLGGAGLGGAGACRLSFGLANGVLDPVGVLAG 743 Query: 654 W---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 L V A AFH A+A A + G+ + +GGV N +L Sbjct: 744 IVAGLRAGVAVPVLAGAFHLAVADAVAEVAGLARRRYGVRLVGLTGGVFANVVLTRACRA 803 Query: 711 YL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 L A F +L + +P GDGGL+LGQ +AA Sbjct: 804 RLATAGFDVLVHRVVPPGDGGLALGQAAVAA 834 >UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter hepaticus RepID=Q7VJB7_HELHP Length = 807 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 239/794 (30%), Positives = 362/794 (45%), Gaps = 72/794 (9%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR----EDPETFLVQLYQHCP 66 + + G +QGVGFRPFV++LA ++ L G V N + + + L + F+ + P Sbjct: 6 IELFGIIQGVGFRPFVYRLAHKMGLKGYVQNRYNTLFICLEVPTRAILDEFITHILSSPP 65 Query: 67 PLARIDSVEREPFIWSQLPTE-FTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERR 123 P A I P + ++ F IR+S + + T + D C CL +M R Sbjct: 66 PNAHIVQHSVTPISTPHILSDYFEIRESISYSTSLPTSLPLDTRICEQCLDDMKGKE-RF 124 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y F CT CG R++II+A+PYDR T M+ F LC C EY +PL+RRFHAQP +C + Sbjct: 125 LNYAFTTCTECGARYSIIKALPYDRIHTSMSDFALCKDCQSEYDNPLNRRFHAQPNSCHQ 184 Query: 184 CGPHLEWVSH-------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 C + + + + L+ + ++K GKIVAIKG+GGF+L +A N + Sbjct: 185 CAIQMRVIDECGTIHSFSQSQDDIKLLKLIVQKIKAGKIVAIKGVGGFNLVANASNVQVI 244 Query: 237 ATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVP------ 284 TLR RK+RP KP AVM + + ++ L +P APIVL+++ + Sbjct: 245 KTLRNRKNRPHKPFAVMFKNLQDISSVAHINEEEKRALLSPQAPIVLLERHFKSEGIINE 304 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG- 343 E + IAP + VG +LP N + HLL L PL+ TS NLSG+P ++ L G Sbjct: 305 ECFNLIAPQIQSVGAILPYNGIMHLLFTLLDMPLIFTSANLSGEPIITHAQELRQKLGGA 364 Query: 344 --IADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVP------ 392 + D L +NRDI +DDS+VR +LR +RGY P +L K+ Sbjct: 365 NAVYDVMLDYNRDICNPIDDSIVRFMAGKMRILRLARGYAPASLGFKAPLKDTSLLAQEE 424 Query: 393 ----PVLCLGADLKNT-----FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD 443 ++ +GA K+T QAV+S ++GDL ++++ +Y Sbjct: 425 VQNGIIVGVGAQQKSTLSFINISWNADYQAVISPYIGDLHSVDSLIRYKLHYDFFTRLYM 484 Query: 444 FTPQYVVHDAHPGYVSSQWAREM---NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 + V D HP Y S+ +A E+ + HH AH A LAE + G I + Sbjct: 485 QEIKAVGCDLHPSYASTHFATELEAQGAQKYLLSHHKAHFYAILAESNALEESG--IGII 542 Query: 501 LDGIGMGENGALWGGECLRVNYR----ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR 556 DG G+GE+ +WGGEC E + L GG+ A K + L+ Sbjct: 543 WDGTGLGEDKHIWGGECFIYQPDMCVGTMERVWHFEEFTLLGGESAIKDIGKLALSLMWH 602 Query: 557 FVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + +N ++L + + GI P SS GR FDAVA LG +YEG Sbjct: 603 YG--LENVQNRVHFSPAELALLQNSFKSGI-YPQTSSVGRIFDAVAYLLGLL-EVQTYEG 658 Query: 617 EAACALEALAASCHGV------THPVTMPRVDNQLDLATFWQQWLNWQAP--VNQRAWAF 668 ++ +E+ A + P + + L Q ++ + V + A F Sbjct: 659 QSGAIIESCALRDYAKCTEGVDIEPYSFELAKGVISLRGIIQGVIDEREKQGVERAAHRF 718 Query: 669 HDALAQGFAALMREQATMRGIT-TLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPA 725 LA AL ++ + + I + FSGGV N+ L R+ A + + +P Sbjct: 719 LHTLAHIALALAQKCSQHKNIPLKVYFSGGVFQNKFLCDRIHTLFAKNHIPFYMHEKMPC 778 Query: 726 GDGGLSLGQGVIAA 739 D +S Q V A Sbjct: 779 NDASISFAQAVFCA 792 >UniRef50_UPI000197837F transcriptional regulatory protein HypF n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197837F Length = 827 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 235/824 (28%), Positives = 375/824 (45%), Gaps = 90/824 (10%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQ 60 + + + G +QGVGFRPFV+Q+A LNL G V N + + + L E FL + Sbjct: 15 DAKTAYAIELFGIIQGVGFRPFVYQVATSLNLKGYVQNRYNSLYIYLESTLIQSEQFLQE 74 Query: 61 LYQHCPPLARIDSVEREPFIWS-QLPTEFTIRQSTGGTMN--TQIVPDAATCPACLAEM- 116 + Q+ PP A I + + ++F I S+ + + D A C ACL +M Sbjct: 75 ILQNPPPNAVIHAHTMHQVPFVTPPYSDFRILASSTEKQDDKLFLPQDVAICQACLQDMG 134 Query: 117 -------------NTPGERRYR-YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPAC 162 N+ R++ Y F C++CG R +II A+PYDR T M F C C Sbjct: 135 CNTGQDIKQDTKQNSRQNPRFQDYAFTTCSYCGARHSIIHALPYDRTNTSMREFKKCKDC 194 Query: 163 DKEYRDPLDRRFHAQPVACPECGPHLEWV----------SHGEHAEQEAALQAAIAQLKM 212 ++EY P +RRFHAQP++C +C + + ++ + L ++ Sbjct: 195 EREYHTPTNRRFHAQPISCNQCAIRMRLIIPSLKQSYIFAYPKATSDILLLALVAQKIME 254 Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQ 266 GKI+AIKGIGGF+L A N A+ +L+ RK+R KP A+M + ++ RQ Sbjct: 255 GKIIAIKGIGGFNLIASATNIQAIMSLKKRKNRSKKPFAIMFKNLQDIASVAEINESERQ 314 Query: 267 LLTTPAAPIVLVDKKY-----------------VPELCDDIAPDLNEVGVMLPANPLQHL 309 L +P APIVL++K + + + IAP ++ +G +LP N + HL Sbjct: 315 ALLSPQAPIVLLNKHFHNRQHNRSHNKRENAILSSQALELIAPQVSSIGAILPYNGIMHL 374 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG- 368 L + L PL+ TS N+SG P ++ + L G+ D L ++R+I +DDS++R Sbjct: 375 LFRFLNTPLIFTSANVSGTPIITKLDELMEKLSGVFDMVLDYDREITHALDDSIMRFMAG 434 Query: 369 --EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 LR SRG+ P L F + L LGA K++ +V ++S + GDL + Sbjct: 435 ELRPLRLSRGFTP----LFLPFGSKKLCLSLGAQQKSSLSIVYKNT-LISPYFGDLHNVD 489 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM------------------NL 468 ++ + L+ ++Y P+ +V D HP Y S+ A+ + + Sbjct: 490 SICRYEKELQFFLSLYVNKPKVIVSDLHPQYASTHLAKNLTNNTALLDSATDSATSLDSP 549 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN--YRECE 526 + HH AH A LAE + G + DG G+GE+G +WGGE + ++ Sbjct: 550 QFLQISHHKAHFYAILAESNALNNDG--FGIIWDGTGLGEDGGIWGGEGFIYDSKHKSMS 607 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 + L AL GG+ + K+ R L + + QN + +++N S+L A E + Sbjct: 608 RIFSLKPFALLGGEGSIKEIGRLALGLLWSYGIQTQNLATKNIEKRENISLLQNAFESKV 667 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 SS GR D VA LG SYEG++ LE+ A P + ++D Sbjct: 668 -FLQTSSMGRLIDCVACLLGIL-EVQSYEGQSGALLESYALRERAEVSPYPFKIDNGEID 725 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 ++ L Q + A F + LA + + + + + FSGGV N+ L Sbjct: 726 CKAMIEEILKTQDKA-KGAKRFLETLAYMALEMSEKVLKTKRVR-VYFSGGVFQNKFLCD 783 Query: 707 RLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 R+ + + + LP D +S GQ V + G+V+ Sbjct: 784 RIHTLFKEHNIPFYMHKILPCNDFSISFGQAVCGSMEQNKGDVK 827 >UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCZ2_FLAJ1 Length = 756 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 237/763 (31%), Positives = 367/763 (48%), Gaps = 49/763 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 + Q+ I G VQGVGFRPFV+ A Q NL G V N+ GV V ++E+ F+ QL Sbjct: 2 TPTFQITISGIVQGVGFRPFVYNTAIQFNLKGFVSNNEFGVVVIVQEEEKTIREFVAQLK 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGE 121 + P A I++++ + F I+ + G ++N + PD A C C E+ P Sbjct: 62 KRHPKKAIINTIQVSEIETEERFDLFFIKPTEKGISINAPLTPDFAICKNCKEEILDPQN 121 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPF +CT CGPR+ I P++R T M+ F +C C +EY +P D RFH+Q +C Sbjct: 122 RRFYYPFTSCTSCGPRYAIAEKFPFERENTSMSPFKMCQTCLEEYLNPNDIRFHSQTNSC 181 Query: 182 PECGPHLEWVSHGEH---AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 PECG + + + + ++ +L G+I+A+K G+ L CD N+ V Sbjct: 182 PECGIQIVFTDNNGTLISGTNKEIFESISEKLNQGQIIAVKNTSGYLLLCDGSNNQTVQE 241 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELC-DDIA 291 LR RK R AKP AV+ + ++LL + APIV++ K +L ++IA Sbjct: 242 LRNRKRRSAKPFAVLFSDFKQIKKHLLHDKTEKKLLKSTQAPIVILPIKNQKKLAVNEIA 301 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P++ +G MLP + + HL+ Q PLV TSGN +G P + +A+ L IAD +L H Sbjct: 302 PNMKTIGAMLPNSGILHLISNLFQKPLVATSGNFNGSPLFFNQNEAVQSLNSIADYYLHH 361 Query: 352 NRDIVQRMDDSVVRESGE-----MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 N +I DDSV+R S + +LRR+RG P+ + +LCLGA LKNT Sbjct: 362 NLEIQNSQDDSVIRFSRKNKQKIVLRRARGLAPN-IDNFHLNNTSDKILCLGAALKNTIT 420 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 + +Q S+++G++ + ++ ++ Q+ +DF PQ +V+D HP Y +++ + Sbjct: 421 IS-NQQIYQSEYIGNVLNYDTYKRFENRIQNYQHFFDFVPQTIVYDQHPSYDNNKIVSDF 479 Query: 467 -----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 L T V HH AH AA L E + ++ + DG G G ++GGE + N Sbjct: 480 LKENPLLKTIKVQHHEAHFAAILGEKKLWKKS-KILGVIWDGSGFGNENEIYGGEFFKYN 538 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARA 581 E +G L GD A P + L+ + +Y ++ + +V ++ Sbjct: 539 RDEITRIGHLEYFPWILGDKMALNPKMSALSI-----SQNDDYFQSF-FNKNELTVYSKL 592 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-----ASCHGVTHPV 636 IE + SS GR FDAVA LG +S+EG+ LE LA S + + Sbjct: 593 IENSV--IKTSSIGRLFDAVAFTLGF-KGNISFEGQTGMFLENLAQKAFYKSNVKLKDYL 649 Query: 637 TMPRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 + N + Q + N A FH L + + A + Sbjct: 650 KDENITNIIPSKKLLVQIVKAFQNNIDCNVIALNFHHTLVKCI----EKTALFSKSKEIA 705 Query: 694 FSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQG 735 FSGGV N +L + +L ++ L F ++L D +S GQ Sbjct: 706 FSGGVFQNSVLVDLIIDHLQPNYKLHFHETLSPNDENISFGQL 748 >UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea RepID=A2BKU6_HYPBU Length = 771 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 267/771 (34%), Positives = 380/771 (49%), Gaps = 44/771 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPET---FLVQLYQ 63 +++R+ G VQGVGFRPFV +LA++L L G V N G VE+ + P++ F+ L + Sbjct: 6 ALRVRVVGLVQGVGFRPFVHRLAERLGLAGYVRNMGGSEVEILVEGPPDSLRLFVSLLEK 65 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGER 122 PP A I+ + EP L T F I +S+ + I PD C C E+ PG R Sbjct: 66 EKPPPAIIEEMRVEPVPARGL-TVFRIEKSSRSRKERSMIPPDFGICDWCAREVLEPGTR 124 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVAC 181 YRYP+ +C CGPRF+++ +PYDR T M FP C C ++Y D + RR+HAQ +C Sbjct: 125 FYRYPWTSCAWCGPRFSMMYDIPYDRENTAMREFPFCEECRRDYEDMGNIRRYHAQGFSC 184 Query: 182 PECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 P CGP + GE + E + A + G IVA+KG+GGFH+A A + VA +R Sbjct: 185 PRCGPKTILLDGRGEPLDVEDPVAEAARLIDEGHIVAVKGVGGFHIASLATDDEVVARVR 244 Query: 241 ARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 K RP +PLA+M L A QLL +P PI+L+ K+ + +AP L Sbjct: 245 RIKSRPTQPLALMARDCSVAAGLVALDAHACQLLRSPRRPILLLPKRDDAPVSPLVAPGL 304 Query: 295 NEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + +G+MLP L LLL + LVMTSGN G P + E L L G D L HNR Sbjct: 305 DTLGIMLPYTGLHLLLLHMVRDGFLVMTSGNRHGMPMCRTVECILDQLGGEIDYILTHNR 364 Query: 354 DIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +IV R+DDSVVR +LRR+RGY P+ + + ++V + +GADL+ + Sbjct: 365 EIVHRVDDSVVRFTAGKPVLLRRARGYAPEWIRIS---RSVGEHVAVGADLQTAGAVSFD 421 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA----REM 466 ++ VL+Q++GDL + G + E L+ + +Y P V D HP Y S + A E+ Sbjct: 422 DKVVLTQYIGDLDEPGQLEELEEELKWLIRVYGLRPSSVALDMHPAYESRRLAAKLSEEL 481 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVI-ALTLDGIGMGENGALWGGECLRVNYREC 525 + V H HA A A LD D + A+T+DG G G +G +WGGE + Sbjct: 482 DAEPVEVQ--HHHAHAVAAAADAGLDPWDYVPAVTVDGAGYGVDGVIWGGEAMIAGAEGF 539 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ------QNWSVLA 579 E G + LPGGD A K+P R L+ + + + + +V + Sbjct: 540 ERTGTIKPFPLPGGDTATKRPLRILIGILSQGWGLDEILQLLEKMGHLGKGISEEEAVTS 599 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + R PLASS GR DAV+A LG +YEGE A LEA A G P P Sbjct: 600 YKLARSNRTPLASSAGRLLDAVSALLGLRYRR-TYEGEPAIVLEAYARRHGGKPLPDEPP 658 Query: 640 RVDNQLDLATFWQQWLNWQA-PVNQRAWAFHDA------LAQGFAALMREQATMRGITTL 692 + A + L W + + +H A + + A + E L Sbjct: 659 ATSYKGLSALDPLRVLEWVVEKLEEGVEPWHLAATVMYWVGRHLAETVLENYDGARDKPL 718 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + SGG N + A T+ P +P GDGG++LGQ ++AAA+ Sbjct: 719 LISGGAAVNDYIYMGAADAAKAYGRTVHIPGKVPPGDGGIALGQIIVAAAK 769 >UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter RepID=Q1CVB1_HELPH Length = 769 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 237/750 (31%), Positives = 359/750 (47%), Gaps = 33/750 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL-REDPETFLVQLYQHCPPL 68 ++ + G VQGVG RPF++ LAQ+L L G V N +E+ L E+FL L + PPL Sbjct: 22 KITLFGVVQGVGMRPFIYTLAQKLELVGFVRNTQAALEIILPAHQTESFLNALKKGLPPL 81 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERRYRY 126 A ++ + P+ + F I +S +N +QI D C CL E+ + Y Sbjct: 82 ALVEKITISPYDKALHFNGFRILESKNHPLNLLSQIPKDLGVCKDCLHEIRDKNSPYFHY 141 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F +C CG R++++ A+PYDR + + F LC C Y+DP ++RFH Q ++C +CG Sbjct: 142 AFNSCAKCGARYSLLNALPYDRENSALKPFKLCEFCASIYQDPTNKRFHIQGISCKKCGI 201 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + + AL ++ GKI+A+KG+GGF L CDARN + LR K+RP Sbjct: 202 VLNY----KRFKNDDALLECAKDIQKGKIIALKGLGGFALLCDARNFQTIERLRLLKNRP 257 Query: 247 AKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 KP A+M + + + L++ +API+L KK +L +IA + + GV+ Sbjct: 258 LKPFALMFKDLNSVKQHAFLNALECESLSSISAPILLARKKPDTQLAPNIAKNSSFYGVI 317 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL LLL L P+V TS N S P A + + L I D L HNR I+ R+D Sbjct: 318 LPYTPLHALLLDLLDFPIVFTSANFSSLPLANDEAE-IDALSFIFDFKLTHNRAIIHRID 376 Query: 361 DSV---VRESGEMLRRSRGYVPDALALPPGFK-NVPPVLCLGADLKNTFCLVRGE--QAV 414 DS+ + + +R +RG+ P L LP + +L LGA+ K F L+ E + Sbjct: 377 DSIAQCIDNAIRPMRLARGFAPLYLTLPKRSNGSQKKILALGAEQKGHFSLLDSETSTLL 436 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 LS GDLS + ++E L YDF P + D H Y +++ A + N P V Sbjct: 437 LSPFCGDLSVLENEKHFKETLNFFLKTYDFKPTLLACDKHKNYTTTKMAFDFNTPLLQVQ 496 Query: 475 HHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 HHHAH A + + Q P I + DG G EN ++G EC + E + Sbjct: 497 HHHAHFLASILDALLQDPHLNHPFIGIVWDGSGAYEN-KIYGAECFVGDLERIEEMARFE 555 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 L GG A K+P R +L L+ ++ + + ++ I + + Sbjct: 556 EFLLLGGQKAIKEPKRLVLEIALKHQLNKLLKRVQKHFKEDELEIFQQMHDKKIQSIATN 615 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPVTMPRVDNQL-DLATF 650 S GR FD VA +L T+S+E E+ LE LA + +P T+ L D Sbjct: 616 SIGRLFDIVAFSLDLT-GTISFEAESGQVLENLALQSDEIAFYPFTIKNSVVCLKDFYQA 674 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 +++ L P A F ++L + AL+ +V SGGV N+LL +LA Sbjct: 675 FEKDLGVLEP-KHIAKKFFNSLVEIITALI----APFKEHVVVCSGGVFCNQLLCEQLAK 729 Query: 711 YLADFT--LLFPQSLPAGDGGLSLGQGVIA 738 L F + P D + +GQ ++A Sbjct: 730 RLRGLKRQYFFHKHFPPNDSSIPIGQALMA 759 >UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJD2_EGGLE Length = 920 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 245/742 (33%), Positives = 334/742 (45%), Gaps = 127/742 (17%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 + ++++G VQGVGFRPFV++LA++ + G V N DGV + + + F+++L ++ Sbjct: 4 ALDIQVKGIVQGVGFRPFVYRLAKKYLIDGWVLNATDGVFIHAEGETKLLDEFVIELSEN 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPGER 122 P +R++ V + + F IR S G T + PD ATC C E+ P +R Sbjct: 64 PPAASRVEEVTLKEVPL-EDFDSFEIRFSDAGAVEKTTLVSPDLATCDDCARELFNPNDR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAM------------------------PYDR---------- 148 RYRYPFINCT+CGPRFTII + P DR Sbjct: 123 RYRYPFINCTNCGPRFTIIEKLPYDRKSTSMKDFPMCERCAREYGDPLDRRFHAQPDACF 182 Query: 149 ----------------------PFTVMAAFPLCPA-------CDKEYRDPLDRRFHAQPV 179 V A P P + A Sbjct: 183 ECGPHISWREHEGMPGALAGVHAPGVSADVPAAPDVPAGASASHAAQTNVSRETLCASDA 242 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 GP + W + E E +A L A+ L GKI+A+KG+GGFHL CDA N AVA L Sbjct: 243 IDAPLGP-IAWGTTRE--ESDAILARAVELLLAGKILAVKGLGGFHLVCDASNPEAVALL 299 Query: 240 RARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 RARK R K AVM+ + + +A +LT PIVL+ K+ +A Sbjct: 300 RARKRREGKAFAVMMADMEAVRAYCEAGEAEEGILTATQRPIVLLRKRPDAVFAPGLADA 359 Query: 294 LNEVGVMLPANPLQHLLLQELQCP-----------------------LVMTSGNLSGKPP 330 L E+GVMLP PLQHLLL + LVMTSGN+ +P Sbjct: 360 LPELGVMLPYTPLQHLLLHDFAKASGCAERSSQREAEGSRAATAVPMLVMTSGNIHDEPI 419 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE--------SGEMLRRSRGYVPDAL 382 I +E A L +AD FL H+R I R DDSVVR + + +RR+RGY P L Sbjct: 420 VIDDEDAYEKLFAVADAFLGHDRAIRARYDDSVVRVIEAGSAGEAVQFIRRARGYAPLPL 479 Query: 383 ALPPGFKNVP-------------PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQM 429 A+P + + G + KNTF L R +A +SQH+GDL + Sbjct: 480 AMPAKAREGEDVSRETSVREQGCSIFATGPEQKNTFALTRDAEAFVSQHIGDLENAETYD 539 Query: 430 QWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQW 489 W +A + +++ P + D HP Y++S+WA E +LP V HHHAH + +AEH Sbjct: 540 AWLQAKDRYETLFEIEPDRIACDLHPEYLTSKWAHEQSLPVTEVQHHHAHVVSVMAEHGL 599 Query: 490 PLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRN 549 G V + DG G G +GA+WGGE L N E V +PGG A K P R Sbjct: 600 ---AGPVCGIAFDGTGYGMDGAIWGGEVLLTNLTAFERFANFAYVPMPGGAAAVKHPLRM 656 Query: 550 LLAQCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCA 608 F + + + + +V + I+RGIN P+ SS GR FDA +A LG Sbjct: 657 AYGVLWAFDLLDHPGAAAALEALGEQAAVCDQMIDRGINTPMTSSVGRLFDAASALLGIC 716 Query: 609 PATLSYEGEAACALEALAASCH 630 +YEGE A LEA Sbjct: 717 AE-PAYEGEPAILLEAAIGRTD 737 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 659 APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFT 716 PV A FHDA Q ++ GITTL SGGV NR L L A FT Sbjct: 826 VPVGIIARCFHDAFVQAIVTAAELVRSLYGITTLALSGGVFMNRYLLEHALAALEQAGFT 885 Query: 717 LLFPQSLPAGDGGLSLGQGVIA 738 + + LP DG +S GQ V+A Sbjct: 886 VAVNRDLPPNDGCISFGQAVVA 907 >UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z0U0_9SYNE Length = 798 Score = 746 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 294/795 (36%), Positives = 387/795 (48%), Gaps = 74/795 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 +QL I G VQGVGFRP V +LA++L L G V N G GV + L+ E L +L Q Sbjct: 4 RLQLEIEGLVQGVGFRPLVARLARELGLSGQVFNTGAGVLLELQGPAEAIATLLQRLRQQ 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIR----QSTGGTMN------TQIVPDAATCPACLA 114 P +RID + R + F I+ +S GG I PD A CPAC A Sbjct: 64 LPAHSRIDRIRRHRRPLVEGEAGFEIQAAPMESPGGKREDTSVRWALIQPDLAPCPACRA 123 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E++ P RR Y I+C HCGPR++++ A+P+DR T +AAF LCPAC EY DP DRR Sbjct: 124 ELHDPDNRRCGYALISCVHCGPRYSLMGALPFDRAHTSLAAFALCPACQAEYDDPSDRRC 183 Query: 175 HAQPVACPECGPHLEWVSHGEHAEQE----------AALQAAIAQLKMGKIVAIKGIGGF 224 HAQ +ACP CGP L W G + LQAA A LK + VA+KG+GGF Sbjct: 184 HAQTIACPRCGPRLSWWDTGGQRLSDPRRPHPSGPSPCLQAAAAALKANRTVALKGVGGF 243 Query: 225 HLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLV 278 L AR AV LR RK RP KPLAVM P L QLL +PAAPIVL+ Sbjct: 244 QLLVRARCQAAVTELRRRKGRPEKPLAVMAPDLAWVRRHCHLNRPEAQLLGSPAAPIVLL 303 Query: 279 DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQAL 338 ++ +CD +AP +GVMLP++PL LLL+ L PLV TSGN SG+P + +AL Sbjct: 304 RRRGEAGVCDAVAPGNPWLGVMLPSSPLHLLLLELLGEPLVATSGNRSGEPLSHDETKAL 363 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALP--------PG 387 +L G+ADGFL+H+R I+ +DDS+ + +LR +RGY P A+ LP P Sbjct: 364 QELAGLADGFLVHDRPIINPVDDSIAQVVCGEPMLLRHARGYAPTAVDLPCGGEPGVDPQ 423 Query: 388 FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 + + +G LK+ L G +A+L HLGDL + R +L + P Sbjct: 424 TQAPTGEVAMGGQLKSALALGWGRRALLGPHLGDLDSAAGEAHLRRSLDAALARHGLHPA 483 Query: 448 YVVHDAHPGYVSSQ----WAREMNLPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 D H Y S + A P V HHHAH ACLAEH + + D Sbjct: 484 GYAVDQHRSYRSHRIGLELAAAHGCPVPLGVQHHHAHLLACLAEHGL---APPQVGVAWD 540 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF----- 557 G G G +G LWGGE LR+ L LPG + A ++P R L Sbjct: 541 GAGQGSDGTLWGGEVLRLEQSGFRAEARLRPFPLPGAERAMREPRRAALGLLFAARGSEG 600 Query: 558 VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGE 617 + A+ + VL+R +++G+ +P SS GR FDAVA+ LG S+EG+ Sbjct: 601 LDRATGTLSMAAFSAEERQVLSRMLQQGLQSPWCSSVGRLFDAVASLLGL-QQRCSFEGQ 659 Query: 618 AACALEALAAS---CHGVTHPVTM--------PRVDNQLDLATFWQQWLNWQ---APVNQ 663 AA LEA A+ + + + LD Q + Q Sbjct: 660 AALKLEAAASHAGTAGRRRYALVLRTHTEPGSGSEPWLLDWHPLLQDLIKDQRRGVAPEA 719 Query: 664 RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQ 721 A AFH Q A + A + L+ GG NRLL A L A L+P+ Sbjct: 720 IALAFH----QALADALVALAVQLDLERLLLGGGCFQNRLLLALAVKGLRRAGIEPLWPR 775 Query: 722 SLPAGDGGLSLGQGV 736 +P DGGL+LGQ + Sbjct: 776 RIPCNDGGLALGQLM 790 >UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR00_9FIRM Length = 769 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 244/766 (31%), Positives = 375/766 (48%), Gaps = 62/766 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 +L + G+VQGVGFRP V ++A++L L G V N G VE+ + RE + FL L Q Sbjct: 8 RLSVAGRVQGVGFRPSVCRMAKELKLTGTVQNLGGEVEIYITGTREKIDAFLCGLKQMER 67 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 P A ++ V+RE + + FT S D + C ACL EM T G RR Y Sbjct: 68 P-ALVECVKREERPLTP-FSAFTSIPSRESENKILAPADISVCSACLKEMKTQGNRRCHY 125 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P+I+CT CGPR+T+++ +PYDR T A+PLC C +EYRD +RR H + +AC +CGP Sbjct: 126 PYISCTACGPRYTVLKKLPYDRENTAFDAYPLCDKCYEEYRDMNNRRCHGETIACHDCGP 185 Query: 187 HLEWVSHGEHA----EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 L G + QE LQ+A L G+I+ +K +GG++L C +AV LR Sbjct: 186 RLLAKMRGSLSAGPWSQEELLQSAKDLLFHGEIIMVKSVGGYNLVCRGDRDDAVQRLRVL 245 Query: 243 KHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVD--KKYVPELCDDIAPDL 294 K R KP A+++ + ++LL +P PIVL+ KK +P + + Sbjct: 246 KQRRDKPFALLVATVGEAEKLCHISREEKELLESPQKPIVLLKRRKKSMPLISPAVTELT 305 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG--IADGFLIHN 352 +GV LP L + LL E++ PLV+TS N +G+P A A + Sbjct: 306 ESLGVFLPPFGL-YALLAEIKIPLVVTSCNFTGEPIIYKQADAFAFYESHESISALFYDE 364 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I++ DDSV R + ++LRR+RGY+P+ +A+ K VL LG +++ +F L Sbjct: 365 REILRPADDSVTRIAAGAVQILRRTRGYMPEPVAVE---KKGMRVLALGGEVEPSFALSV 421 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV----SSQWARE 465 +Q DL+ + +R + + + +P +V D HP Y S + A++ Sbjct: 422 NNLIYSAQVPSDLTLEKSSAFYRRLVADWEELLHISPDILVCDLHPCYTTAEESRKLAKK 481 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +++P V HHH HA + +AEH G +A+ DG G G +G +WGGE L R Sbjct: 482 LDVPVLEVQHHHGHALSVMAEHHLD---GKCLAVIFDGTGFGTDGTVWGGEFLLCEDRSF 538 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 +G + +++ D + +Q W++LL + + +V+ A+ G Sbjct: 539 IRVGAVKPISMISSDESVRQAWKSLLCHLVHSGI---------PSDDKRAAVVKAAVAGG 589 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE---ALAASCHGVTHPVTMPRVD 642 +N +SS GR FDAV+AALG A +Y+G A LE ALA + ++ Sbjct: 590 LNTVKSSSMGRLFDAVSAALGLADYN-TYQGRCAMLLENQAALAKRERKIPTELSFNEEV 648 Query: 643 NQ--------LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 + D A W++ A FH+A+ + ++ + G+ T++ Sbjct: 649 VETENGSVTFFDPAPLWEKV--TGEDKAAAALGFHEAVIR----IVERMSEKTGVETVIL 702 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 SGG NRLL L + + Q+LP GDGGL+ GQ Sbjct: 703 SGGCFANRLLLEGCVEALKGKGHAVYWNQALPPGDGGLAFGQAWYG 748 >UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Thermoproteaceae RepID=A1RR07_PYRIL Length = 748 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 263/761 (34%), Positives = 368/761 (48%), Gaps = 45/761 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPE-TFLVQLYQH 64 + I G VQGVGFRP+V LA QL L G V N G G VE+ + + FL L Sbjct: 3 KAYLIHIIGIVQGVGFRPYVKILADQLGLSGYVKNLGGGEVEIYVEGERSREFLDSLLNG 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPGERR 123 P I+ + + FTI +S+ I PD A C CL E+ ERR Sbjct: 63 RPKAIYIEDIRVIEVAPRGV-RGFTIEKSSQEVETVSMIPPDLAICDECLREVLEGDERR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPL---DRRFHAQPVA 180 RYPF +C+ CGPRF+II+ +PYDR T AFPLC C +EY DP RRF+ Q ++ Sbjct: 122 RRYPFNSCSFCGPRFSIIKKLPYDRENTSWTAFPLCDKCTREYNDPKVGGIRRFYYQGIS 181 Query: 181 CPECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 C GP ++ + GE + + A + G IVA+KG+GGFH+ A + + VA L Sbjct: 182 CKNDGPQVKLLDSTGEPIDVGDPISEASRLINEGYIVAVKGVGGFHIFALASDDDVVAKL 241 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RK RP +P A+M + + A +LLT+P PIVL+ K+ ++P Sbjct: 242 RKRKKRPTQPFAIMALDLETAGRLAVVNKTAAELLTSPQRPIVLLFKREDSPASPLVSPG 301 Query: 294 LNEVGVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L++ G+ LP LQ+LLL E++ + TSGN+ G+P A L G+AD L H Sbjct: 302 LDKEGIFLPYTALQYLLLSEIRDKFAIATSGNIHGEPMCTDWRCV-AKL-GVADYILDHT 359 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 +IV R+DDSVVR + +LRR RGY P + P + + GADL+ + Sbjct: 360 LEIVHRVDDSVVRFTAGRPTLLRRGRGYAPVWIKTP--LRLGRAAVAFGADLQTAGGVGI 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G++A+L+Q++GDL LR + Y +V D + Y S + WA E Sbjct: 418 GDKAILTQYIGDLDSFKALEDLDRELRWLVQTYRLREFVLVCDLNQTYNSHRLCREWAEE 477 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 N V H A LA +A+ +DG+G+GE+GA WGGE L V+ Sbjct: 478 FNAEIYMVQ---HHHAHALATAADVGVAEPFVAVAIDGVGLGEDGAAWGGEVLYVDGARY 534 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ------NWSVLA 579 E + L V +PGGDLAA +P R LA ++ E + E + ++ ++A Sbjct: 535 ERVRHLAYVPMPGGDLAALRPARMALAYLFKYFGEDWDLVERLKLAERLPGGLSEAQIVA 594 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 R +++ SS GRF DAVAAALG A +YEGE A LEA AA + Sbjct: 595 REVKKSRL--YTSSVGRFLDAVAAALGVAWER-TYEGEPAIRLEATAAGGR-----LIEL 646 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 ++Q++L + A V A+ L Q E A +G+ +V GG Sbjct: 647 EAEDQVELFGQLIELYLKGADVKDLAYTAQYKLGQILGKWACETAERKGVRHIVVGGGAA 706 Query: 700 HNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 N + A L L P P GDGG++LGQ A Sbjct: 707 VNDYIIAGLESVCGRAAL--PSKTPPGDGGIALGQLYYLAH 745 >UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYA9_9DELT Length = 734 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 252/740 (34%), Positives = 348/740 (47%), Gaps = 39/740 (5%) Query: 21 GFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARIDSVERE 77 GFRPFV LA+ L L G V N G V V + +L + P A+I++ R Sbjct: 2 GFRPFVAGLARGLGLRGHVENRGGEVIVAIEGSAAALDAFAARLPEEAPEAAQIEA-ARW 60 Query: 78 PFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGP 136 + L F IR S G I PD C ACLAE+ P +RR+ Y CT CGP Sbjct: 61 MEVEGGLGDGFVIRASEARGEGVLAIGPDLRVCEACLAEVGDPEDRRFGYGLNACTACGP 120 Query: 137 RFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEW--VSHG 194 R TI P+ R + MA+FP CPAC E+ DP DRR+HA+ +ACP+CGP L + Sbjct: 121 RLTITARSPWARADSAMASFPACPACQGEFEDPEDRRWHAEAIACPDCGPRLRLEALDGR 180 Query: 195 EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML 254 A E A+++A L+ G+++ +KG+GGF L DAR+ AV TLRARK RP K LAVM+ Sbjct: 181 GLAGPEGAIESAAELLRRGQVLGLKGVGGFQLLVDARSEAAVETLRARKRRPHKALAVMV 240 Query: 255 PVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 + A L +PA PIVL+ ++ P+ + +AP +G+MLP Sbjct: 241 ADLRAAAELVDLTGPAAAALDSPAGPIVLLPRRG-PQAAEGVAPGQPRLGLMLPTTAAHA 299 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES- 367 LL P+V TSGN+ G+P A + ++A A L G+AD L+H+R I++R DDSVV+ Sbjct: 300 RLLAAFGGPIVATSGNVHGRPMARTLDEARAQLTGVADALLVHDRAILRRCDDSVVQVVE 359 Query: 368 --GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDD 425 LR RG P LP +L LG L++T A++ ++GDL + Sbjct: 360 GRPRALRLGRGLAPARFELPGSADA--SLLALGGHLQHTPAYAGEGLALVWPYVGDLDEA 417 Query: 426 GIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-----EMNLPTQTVLHHHAHA 480 ++ E L + P VV DAHP Y +++WA + +L V HHHAH Sbjct: 418 ETRVAMGEGLADLCATIGRAPTRVVCDAHPDYATTRWAEAAQRRDPSLRVDRVWHHHAHV 477 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AA LAEH + ++ DG G+G + + WGGE L V L L LPG D Sbjct: 478 AAVLAEHGRAA----ALGVSWDGAGLGTDRSSWGGEFLLVEGARFRRLAHLRPFPLPGAD 533 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 AA+ R L Q + + R +P +S+ GR FDA Sbjct: 534 AAARDGLRVLAGML---AAAELPAPRLGGEQDEALARFLSIARRPRLSPSSSAVGRLFDA 590 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 AA +G + A A AA +P +LD ++ +A Sbjct: 591 FAALVGLRRRSRYQAEAACALEHAAAAHGPAPAYPFGFD--GARLDWRPALVGAIDERAR 648 Query: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLL 718 A H L A++ T+ SGG N LL A + L +L Sbjct: 649 PGLVAARVHATLISMILAVVARHRP----RTVALSGGCFANALLLAGASEALRGGGVEVL 704 Query: 719 FPQSLPAGDGGLSLGQGVIA 738 P+ LP GDGGL+LGQ +A Sbjct: 705 SPERLPPGDGGLALGQAWVA 724 >UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phymatum STM815 RepID=B2JX90_BURP8 Length = 769 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 268/781 (34%), Positives = 356/781 (45%), Gaps = 68/781 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCP 66 ++ + G VQGVGFR FV +LA+ NL +VC +GV + +R + + F L + P Sbjct: 6 RVEVSGIVQGVGFRSFVRRLARHFNLSVEVCKGTNGVPIDIRGEGRNLDAFRAALAEQPP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDA-ATCPACLAEMNTPGERRYR 125 LA ID+ R S F I +ST + +P A C+ E+ T G RR+R Sbjct: 66 LLAHIDAARRTAGTPSPAMRYFCIAESTEAVTSQSCIPAYSALRDMCIDELFTEGGRRWR 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 +PFI CT CGPR +I PY R T M AF LC C EY D DRRFHA+ +AC ECG Sbjct: 126 HPFICCTDCGPRDALIHRTPYHRAHTSMTAFALCERCAAEYSDLADRRFHAETMACTECG 185 Query: 186 PHLEW-------VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 P L + + + A A + G+IVA+K + GF L C A N AV Sbjct: 186 PTLRFRPPSARGYAAPRSGSPMDPVARAWATIARGEIVAVKRLDGFQLICHATNPAAVER 245 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAA-RQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR RK RP KPLA+++P L DA+ +LL + PIV+ + Sbjct: 246 LRERKRRPTKPLALLVPKVASAAQWVDLGDASNAKLLASAIRPIVVSRR----------- 294 Query: 292 PDLNEVGVMLPANPLQHLLLQEL-QCP-------------LVMTSGNLSGKPPAISNEQA 337 LN +G MLP+ P+Q+LL P V S NLSG+P + Sbjct: 295 --LNRLGPMLPSTPIQYLLFHRAQGLPSGTRWLGEAQPTIRVPASANLSGEPLLSDSADV 352 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVRES----GEMLRRSRGYVPDALALPPGFKNVPP 393 L IA+ L H+R+IV R DDSVV + LRR+ VP + LP + P Sbjct: 353 GEALADIANAVLDHDREIVSRCDDSVVLAAHPLPAITLRRACRSVPKPVPLPT---DGPS 409 Query: 394 VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDA 453 VL LGA +K+T L G A + +LGDL G+ E ++ TP + D Sbjct: 410 VLALGAQMKSTVTLTGGRLADVLPYLGDLRSLGVCELLEETVKHHVFRMHVTPAAIACDL 469 Query: 454 HPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN 509 P S++ A + ++P + HHHAH AA LAE+ G + L LDG G G++ Sbjct: 470 QPDLYSTRLAETLVDCWSVPLLGIQHHHAHVAAVLAENAHT---GPALGLALDGFGWGDD 526 Query: 510 GALWGGECLRVN-YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 G WGGE LRV + LG L + LPG D A WR A PE + S Sbjct: 527 GNAWGGELLRVESGGRAQRLGHLSRLPLPGADAADHASWRMAAALLHTLKPEARRLS--P 584 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 + L IERG N P + GR+FDA+A G P TL +EGEAA LEAL Sbjct: 585 ATDSPTTVRLYLQIERGFNCPTRTCLGRWFDAIAGLAGICP-TLHHEGEAAMTLEAL--W 641 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 C + L+L ++ + PV A ++H LA A +R Sbjct: 642 CTATSRADGWHIDGPNLNLLPLARRLAALRDPVE-IARSWHATLATALADWLRHAMCTTD 700 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLADFTLL--FPQSLPAGDGGLSLGQGVIAAARWLAGE 746 I T + RLA A L SLP GD LS GQ A + + Sbjct: 701 IDTDRRPWWLPRESRADVRLARCPAQRALHAVRAHSLPPGDDALSYGQAWTAIQQLQSST 760 Query: 747 V 747 V Sbjct: 761 V 761 >UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE4_9FIRM Length = 634 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 242/648 (37%), Positives = 313/648 (48%), Gaps = 39/648 (6%) Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 M P RRYRYPFINCT CGPRF+IIR +PYDRP T MA F +CP C EY D RR+H Sbjct: 1 MQDPHGRRYRYPFINCTDCGPRFSIIRRLPYDRPATTMAGFAMCPDCAAEYGDIRSRRYH 60 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 AQP CP CGP + + A L GKIVA+KG GG HLAC A + +A Sbjct: 61 AQPNCCPVCGPRAIYRDAAGKPVAGDPIALAQKALAAGKIVAVKGTGGIHLACRADSPDA 120 Query: 236 VATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LR RKHRP KPLA+M + LL +P PI+L+ KK Sbjct: 121 VARLRRRKHRPEKPLALMARDLSTAARFCRYTEEEAALLQSPRRPILLLAKKDPTGQTWL 180 Query: 290 IAPDLNEVGVMLPANPLQHLLLQ-ELQCP--LVMTSGNLSGKPPAISNEQALADLQGIAD 346 A +GVMLP PL LLL P LVMTS N SG P + NE A++ LQGIAD Sbjct: 181 SA--TTRLGVMLPYTPLHILLLDGTFGGPDLLVMTSANRSGCPVLLDNEDAVSALQGIAD 238 Query: 347 GFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 GFL+H+R I R DDS V R + RRSRGY P L L ++V VL GA+ K Sbjct: 239 GFLLHDRPIANRCDDSLAMVWRGAPVFFRRSRGYAPQPLLLD---RDVTGVLAFGAEQKG 295 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 +F RG A +SQ++GDL + + AL +++ P +V D HP Y S++ A Sbjct: 296 SFAAGRGRHAFVSQYIGDLKNAETLDHYCTALTGTLSLFGLQPTVLVCDLHPDYASTREA 355 Query: 464 RE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 E +LP + V HH AH AAC+A+++ G V L DG G+GE+G++WGGE L Sbjct: 356 EEMAARQHLPLRRVQHHWAHMAACMADNRLE---GPVFGLIWDGTGLGEDGSIWGGEYLV 412 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 +Y+ +G L VALPGGD R L+ L A+ + Sbjct: 413 GDYQHYHRVGSLRPVALPGGDACIAGIGRTALSLALDAG------CPEAAPAFARREGVT 466 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH--GVTHPVT 637 ++ G +S GR FD V + L Y+G+A LEALA + P Sbjct: 467 ALLKSGYRCVQSSGMGRLFDGVYSLLT-GRTDADYDGQAPALLEALAEGADPADLYSPAY 525 Query: 638 MPRVD-NQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT--TLVF 694 + D + + A Q + +Q +V Sbjct: 526 YEEDGVRRFDTRPLIRALCAAKTAGTGAAALA-AGFQQALCRMALDQCRTLNPDGLPVVL 584 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 SGGV NR L + L A + + + + D GL+LGQ I AA Sbjct: 585 SGGVFLNRALLEGVTALLEGAGYRVYTHRRVSPSDEGLALGQLAIGAA 632 >UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alphaproteobacteria RepID=Q2RXN2_RHORT Length = 768 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 281/767 (36%), Positives = 367/767 (47%), Gaps = 53/767 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE-TFLVQLYQH 64 + ++L +RG VQGVGFRP V++LA L L G V N G GV + + F L Sbjct: 20 ATRLRLSVRGLVQGVGFRPTVYRLATGLGLRGFVLNTGAGVVIEVEGARAGEFAEILRHG 79 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP A I+++E S F I S T+I PD A CP+CL+E+ P +RR Sbjct: 80 APPRAHIEALETHRLAASGRDEGFRIIDSDTAAPGTTRIGPDTAPCPSCLSELFDPADRR 139 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YR+PFI C CGPR TI A+PYDR T M F LC AC +Y DP RRFHA+ ACP+ Sbjct: 140 YRHPFIACCDCGPRHTIAGALPYDRARTAMGGFALCAACAADYADPASRRFHAELTACPD 199 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L + +++ G IVA+KG+GGF L CDA V LR K Sbjct: 200 CGPRLTLDPAD-----------ILREIRAGAIVALKGLGGFQLICDASQPAPVERLRRGK 248 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAPDLN 295 R AKP A+++ + A + LT+P PIVL+ ++ P L IAP L+ Sbjct: 249 RRDAKPFALLVASLTDARALCDVRSAEAEALTSPERPIVLLHRRADARPPLAAAIAPGLD 308 Query: 296 EVGVMLPANPLQHLLLQE-LQCP-------------LVMTSGNLSGKPPAISNEQALADL 341 +GVMLP PLQ+L+ E P LV TS N +G P + + A+L Sbjct: 309 TLGVMLPVTPLQYLIFHEAAGRPAGTAWLDQPTPLVLVATSANRAGAPLILEGAEVAAEL 368 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLG 398 D H+R I+ R DD VVR G +RR RG P+ + L + +PPVL LG Sbjct: 369 GADVDVLADHDRPILARADDGVVRVLGDQARSVRRGRGQTPEPIVL---GRALPPVLALG 425 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 A KN+ C+ RG++A LSQH+GDL R A+ + D P V HD HP + Sbjct: 426 AQWKNSVCVTRGDRAFLSQHIGDLDSRATLAFQRAAIDQLMRFVDTRPVVVAHDLHPDFA 485 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 SS+ A M LPT + H A A G ++ L LDG G+G++G WGGE L Sbjct: 486 SSRLAEAMGLPTIAI---QHHHAHLAAVAAEHHIDGPLVGLALDGFGLGDDGGAWGGELL 542 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 R++ LG L +ALPGGD AA+QPWR + R + + + Sbjct: 543 RLDGDGFVRLGHLAPLALPGGDAAARQPWRMAASALARLGR--GDEIVRRFAHRPEAGQI 600 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 A + R +SCGR+FDA A LG + YEGEAA LEALAAS Sbjct: 601 AALLARPDTLGQTTSCGRWFDAAAGLLGLCDE-VRYEGEAAMRLEALAASPRIAAE---- 655 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 +Q L + A FH L + +GG Sbjct: 656 GWRISQGVLDLLPLLDRLSRLDAGAGAGLFHGTLVAALVDWALPAIHACPGARVALAGGC 715 Query: 699 IHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + NR L L A T L P+ PA DGGL+LGQ +A RWL Sbjct: 716 LINRSLAEGLITTFAARGITALLPRQSPANDGGLALGQAYLAGLRWL 762 >UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPB6_9CHRO Length = 837 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 282/814 (34%), Positives = 384/814 (47%), Gaps = 83/814 (10%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + L RG VQGVGFRPFV +LA+ L+L G+V N V V L+ + E FL +L Sbjct: 4 ARLLLHCRGTVQGVGFRPFVHRLARALDLVGEVENVAGAVRVDLQGERPALEQFLGRLGS 63 Query: 64 HCPPLARIDSVE-REPFIWSQLPTEFTI-----RQSTGGTMNTQIVPDAATCPACLAEMN 117 P AR++ ++ R S+ P I R G + +V D A CPACLAE+ Sbjct: 64 ELPAPARLEPLQPRWLPPLSRPPRAVRIAAAAPRPLGAGLIAQALVADRAPCPACLAELA 123 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RR+ YPFI+C CGPR++I A P+ R T +AAFPLC AC E+ DP DRRFHA+ Sbjct: 124 DPTDRRHGYPFISCAACGPRYSIATAEPFARAHTTLAAFPLCAACRSEFEDPADRRFHAE 183 Query: 178 PVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 + CP CGP L+ ++ + AA L+ G I+A++G+GGF L +A A Sbjct: 184 TIGCPACGPRLQLLAAAPDTLPAGRDPIAAAADLLRAGGILALQGVGGFQLLVEATRQEA 243 Query: 236 VATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPEL--- 286 V LR RK RPAKP A+++ + +A +LL +PAAPIVL+ +++ P+ Sbjct: 244 VQRLRRRKSRPAKPFALLVADPAWLEPQVRIGEAEIRLLRSPAAPIVLLRRRHDPQALQG 303 Query: 287 ------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + +AP +GVMLPA+PL LL+ + PLV TSGN SG+P I +A Sbjct: 304 PAAMVVAEAVAPGSPALGVMLPASPLHRLLVAAVGRPLVATSGNPSGEPLCIDPLEARQR 363 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L GIAD FL+HNR I + +DDS+V+ +LRR+RG+ P AL LP L L Sbjct: 364 LAGIADAFLLHNRPIARPLDDSLVQLIDGRPVLLRRARGHAPAALDLPLPPPADHAALAL 423 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF------------- 444 G DLK L RG Q ++ + GDL+ Q + L + Sbjct: 424 GGDLKAAPALARGGQIWVAPYQGDLAGARQQRAVEQGLDELLQTLGLGGAPPDGDSPVGA 483 Query: 445 TPQYVVHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 + +V DAHPGYV + + A+ Q V HH AH A AEH G ++ Sbjct: 484 SAPLLVADAHPGYVGTALAARLAQRYGTALQHVQHHRAHGLAVAAEHGL---AGPLLVWA 540 Query: 501 LD--GIGMGENGALWGGECLRVNYRE-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF 557 D G G G LWGGE L ++ + L L LPGG+ A ++ R L L Sbjct: 541 ADGLGYGPGPGPQLWGGELLLLDGAGAAQRLACLRPWPLPGGERAMRECRRTALGLLLAA 600 Query: 558 VPEWQNYSETA----SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLS 613 P ++ A + +LA A+ G NAP ++ GR FDAVA+ L S Sbjct: 601 DPALLHHPGAAACRGAFSPAERQLLAAAVAGGCNAPRTTALGRLFDAVASLLDVLQE-QS 659 Query: 614 YEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW-----------QQWLNWQ---- 658 YEGEA LE LA ++ + L WL+W+ Sbjct: 660 YEGEAGLRLEGLARRRDQAAENPSLAAEEPVGALLPLVPVPPAEAPDLPLGWLDWEPLLR 719 Query: 659 ---------APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 A A FH AL A A + G + +GG N LL Sbjct: 720 RLLDALAAEAAPESLASGFHHALTASLVAAAARAAELSGCRRVALAGGCFQNALLLEGCI 779 Query: 710 HYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L A + + LP DGGL+LGQ R Sbjct: 780 AGLRRAGLQPCWSEQLPCNDGGLALGQLWAVLPR 813 >UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CGN1_9FLAO Length = 577 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 189/579 (32%), Positives = 274/579 (47%), Gaps = 42/579 (7%) Query: 190 WVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 W + G+ E A+ I + GKI+AIKGIGG+ L CDA N A+ TLR RKHRP+ Sbjct: 4 WNNKGQKIEANTQLAIDKIIRFWEEGKIIAIKGIGGYLLTCDATNPKAIQTLRKRKHRPS 63 Query: 248 KPLAVMLPVADGLPD------AARQLLTTPAAPIVLV--DKKYVPELCDDIAPDLNEVGV 299 KP A M P + + +Q+LT API+L+ KK V DIAP LN++GV Sbjct: 64 KPFACMYPNINKIEQDCYVDSTEQQMLTGEVAPILLLQLRKKSVDIALSDIAPGLNQIGV 123 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 MLP PL LL+Q P+V TSGNLS +++ ++L GI D L ++R+IV Sbjct: 124 MLPYTPLYLLLMQAFGKPIVATSGNLSNASIVFEDKKIFSELSGIWDFALTNDREIVTPQ 183 Query: 360 DDSVVRESG-----EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 DDSV+R S ++RRSRG P+ + +L LGA K+ F L+ G Sbjct: 184 DDSVMRFSPFKKQPILIRRSRGVAPNYFWPDIPTEQ-KTILALGASQKSAFGLLFGGLFY 242 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN----LPT 470 LSQ+LGDL+ + + N+ + P+ ++ D HP Y S+++ + + Sbjct: 243 LSQYLGDLTYLESAENLKRTIEHFVNLLNCKPEVILVDKHPDYYSTEYGKHLRDANRTKL 302 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 + HH AH A L+EH V+ + DG G G + +WGGE L ++ + L Sbjct: 303 VYIQHHFAHFAGVLSEHSLLQKSKRVLGIVWDGAGYGNDRNIWGGEFLVYENKKIKRLSH 362 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 + V L GD A +P + L+ + + + W + R +++ P Sbjct: 363 IAYVPLILGDKMAGEPRLSALSHSGQNPAILPLLKD--KFSTKEWKIYQRLLDK---TPP 417 Query: 591 --ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 SS GR FDAVA LG T +YEGEAA LE +A + D Q+ Sbjct: 418 LKTSSMGRLFDAVACLLGI-MDTQTYEGEAALRLETMAQTYFDRHEDTLDSGYDTQISYL 476 Query: 649 ------TFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 + LN ++ A+ FH +L + + E I + FSGGV Sbjct: 477 DGISTMPIIEGVVKDLNNGTAKDEIAFKFHYSLVKMVEEIALE----NTIEKIAFSGGVF 532 Query: 700 HNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVI 737 N LL L +L + F L F Q + D G++LGQ Sbjct: 533 QNGLLVDLLMMHLENRFQLYFHQQVSPNDEGIALGQLAY 571 >UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9X9_9ACTN Length = 1042 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 191/469 (40%), Positives = 234/469 (49%), Gaps = 73/469 (15%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ I G VQGVG RPFV++ A + + G V N GDGV + E F+ L P Sbjct: 5 RIHITGIVQGVGMRPFVYRQATEHGVTGWVLNAGDGVHIEAHAEGGALEAFVHSLRDQAP 64 Query: 67 PLARIDSVER----------------------------EPFIWSQLPTEFTIRQSTGGTM 98 A++D+V+ E Q F I S T Sbjct: 65 AAAQVDTVDVAFFDKAEEPIVEPDASTLEPAADVRPGAEAVHPLQAEPRFRIIASQDETE 124 Query: 99 N-TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFP 157 + T + PD ATC CL E+ P +RRY YPFINCT+CGPRFTIIR +PYDR T M AFP Sbjct: 125 HSTLVSPDIATCDDCLRELFDPSDRRYHYPFINCTNCGPRFTIIRGLPYDRAQTSMGAFP 184 Query: 158 LCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGE--------HAEQEAALQAAIAQ 209 +CPAC EY DPLDRRFHAQP AC CGPH+ W G +A + Sbjct: 185 MCPACASEYADPLDRRFHAQPDACFACGPHITWQERGGREALVGATRETSDAIIARCAEL 244 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDA 263 + IVAIKG+GGFHLAC A + AV LRARK R KPLA+M D + Sbjct: 245 IASDGIVAIKGLGGFHLACRADSERAVRELRARKRRSNKPLAIMARDLDAAGALCHVGPK 304 Query: 264 ARQLLTTPAAPIVLVDKK---------YVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 R LL PIVL+ ++ L +A DL E+G+MLP PLQHLL+ E Sbjct: 305 ERDLLYGSIKPIVLLQRRGSMSGENPPSSSGLASSVAFDLPELGIMLPYTPLQHLLMAEC 364 Query: 315 QC----PLVMTSGNLSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVRESG 368 + LVMTSGNLS +P + N A A L GIAD L ++R I+ R DDSVVR Sbjct: 365 RVRGIDALVMTSGNLSEEPIEMDNGAAWARLVESGIADALLGNDRAILSRFDDSVVRAVN 424 Query: 369 ---EMLRRSRGYVPDALALPPGF---------KNVPPVLCLGADLKNTF 405 + +RR+RGY P LALP P GAD K T Sbjct: 425 GQVQFVRRARGYAPRPLALPNSEGHGAARRTQDTRPAREAEGADAKATI 473 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 3/122 (2%) Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC--LRFVPEWQNYSE 566 +G +WGGE L + + L LPGG + + P RN A + Sbjct: 724 DGTIWGGEVLLASLSSFDRAAHLEPWPLPGGAASVRDPRRNAFALLKHYDLLDHPGAAPL 783 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 ++Q + +R IERGIN PL SS GR DAV+A LG + +YEGE A LEA A Sbjct: 784 LDTLQPDEKELASRMIERGINCPLTSSMGRLLDAVSAILGIC-HSATYEGEPAILLEAAA 842 Query: 627 AS 628 Sbjct: 843 HR 844 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Query: 381 ALALPPGFKNVPPVLCLGADLKNTFCLVRGE-----QAVLSQHLGDLSDDGIQMQWREAL 435 P VL G + K T L R + Q +SQH+GDL + W+ A Sbjct: 510 PSGYEPRDNRPLCVLACGPEQKATLALTREDGTGGAQCFISQHIGDLENAETFDAWQSAR 569 Query: 436 RLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHH---AHAAACLAEHQ 488 M+ ++D P + D HPGY+SSQWARE LP V HHH A A A Sbjct: 570 ARMEGLFDLRPSALTCDVHPGYLSSQWAREQARATGLPLVQVQHHHAHIAAVIAEAAARG 629 Query: 489 WPLDGGDVIALTLDGIGMG 507 VI + DG G G Sbjct: 630 EIEANARVIGIAFDGTGAG 648 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 5/120 (4%) Query: 626 AASCHGVTHPVTMPRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMRE 682 A ++P + + L+ A Q AW H A+ + A E Sbjct: 917 ATPTDNEPLGKSLPSTATSISMQPLLLHILDGIAQGASPEQLAWDTHRAIVEITARTAVE 976 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 + G+ T SGGV NRLL ++ L A T+L P+ LP DGG++ GQ +A A Sbjct: 977 ISNSTGVRTAALSGGVFMNRLLLEGISVELERAGLTVLTPRDLPCNDGGIAYGQAAVARA 1036 >UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV7_9DELT Length = 861 Score = 474 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 169/381 (44%), Positives = 210/381 (55%), Gaps = 21/381 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 L + G VQGVGFRPFV++LA+Q L G VCN GVE+ L FL L + Sbjct: 4 RWSLALGGLVQGVGFRPFVYRLARQHALAGRVCNSAAGVEIELEGPRPRLVAFLDDLQRQ 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP A I+ +ER F I + GG +VPD A C CLAEM P +RR Sbjct: 64 APPAAVIEHLERRELPPV-GEQGFVIADTQCGGPPVAGVVPDLAVCADCLAEMLDPADRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCT+CGPR+TII +PYDRP T M F +C C EY DP RRFHAQP ACP+ Sbjct: 123 YLYPFINCTNCGPRYTIIEKIPYDRPHTTMRVFTMCRRCQAEYDDPASRRFHAQPNACPD 182 Query: 184 CGPHLEWVSHGEHAEQEA---------ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP L VS + + +A A+ +L G+IVAIKGIGGFHLA + + Sbjct: 183 CGPALALVSLNQQRQDKAPPPLAAGPSAVAETRRRLLAGEIVAIKGIGGFHLAVNGADQA 242 Query: 235 AVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVL-VDKKYVPELC 287 AV LR RK RP KPLA+M+ L LL +PA PIVL + + + Sbjct: 243 AVKRLRRRKGRPDKPLALMVRDLATARGLVQLGPMEENLLVSPARPIVLALRQAAALPVA 302 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +AP +G+ML PL HLLL LVMTS N S +P I N++A L IAD Sbjct: 303 AAVAPGNRRLGLMLAYAPLHHLLLDSELPLLVMTSANPSSEPLCIDNDEACRRLSSIADA 362 Query: 348 FLIHNRDIVQRMDDSVVRESG 368 L+H+R IV+ DDSV+ + Sbjct: 363 VLLHDRAIVRGNDDSVIMQGP 383 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 141/402 (35%), Positives = 198/402 (49%), Gaps = 37/402 (9%) Query: 367 SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 + ++RR RGY P L P VL +G +LKNT CL +AV+SQHLGDL + Sbjct: 459 APLVIRRGRGYAPG---LLPFSHRGAAVLAVGGELKNTVCLAADGRAVISQHLGDLQNLE 515 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLHHHAHAAA 482 + + + + ++ PQ V +D HP Y++S+WAR E LP V HHHAH AA Sbjct: 516 SYRVFGQTIADLSQLFAIQPQVVAYDLHPDYLASRWARQWAAEQGLPAVAVQHHHAHLAA 575 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLA 542 CLAE++ G + L LDG G G +G++WGGE L + G L + LPGGDLA Sbjct: 576 CLAENEHQ---GPALGLILDGTGYGPDGSIWGGEILLGDAGGFSRWGHLETMPLPGGDLA 632 Query: 543 AKQPWRNLLAQCLRF----VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFF 598 +QPWR L + +P +E + + +W L + + IN P SSCGR F Sbjct: 633 VRQPWRAALGFLYQAFAGDIPPLPFLAELQAADKVDWQALLPPLRQNINCPRTSSCGRLF 692 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ-------------- 644 DAVAA G +SYE +AA L A G P ++N+ Sbjct: 693 DAVAAMAGGCQK-ISYEAQAAVELMQAADGLQG--PPFAYRLIENKVTEYGFHGAGGPGV 749 Query: 645 -LDLATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 + L+ ++ A + + + FH L F A + AT GI T+ +GGV+ Sbjct: 750 LMQLSPLVCEVAAAVSAGAGLTEISRRFHATLVDMFTAALVTAATATGIKTVALAGGVMQ 809 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 N +L A L L A + P+ LP+ DGGL+ GQ V+AA Sbjct: 810 NEVLLAGLKDSLAQAGLAAMLPRRLPSNDGGLAYGQAVVAAT 851 >UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Proteobacteria RepID=A7I1N9_CAMHC Length = 1124 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 166/292 (56%), Gaps = 12/292 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHC 65 ++ I G+VQGVGFRPF++++A + L G V NDG+GV++ D E F L+ Sbjct: 3 LKFEIAGRVQGVGFRPFIYRIATRFGLKGVVFNDGEGVKIFASADKLKIEKFKKALFAEL 62 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA+I+ ++ Q T+F I +S + T I+PD A C C E R+ Sbjct: 63 PPLAKIEKIKITE-TLPQNFTDFKIVKSENSQIFTPILPDFAICDDCKMEFYDTKNERFH 121 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR +II+A+PYDR T M F +C C+ EY++PL+RR+HA+P++C +CG Sbjct: 122 YPFINCTNCGPRLSIIKALPYDRKNTTMNVFKMCEKCEDEYKNPLNRRYHAEPISCRKCG 181 Query: 186 PHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L + A E ++ A L GKIVA+KG+GGFH+ DA N AV TLR RK Sbjct: 182 PELFLKNMQGKILASGEDGVKKATELLYAGKIVAVKGMGGFHIMADACNFEAVKTLRERK 241 Query: 244 HRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 HRP KP AVM + ++L + PI+++ K + Sbjct: 242 HRPNKPFAVMCKDENMAKKIAFISPFESKILNSNIKPILILKMKNSQNFMQN 293 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 17/376 (4%) Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGD 421 S+ + + LR SRG P FK L LG++LKN F + + +S ++GD Sbjct: 754 SIFNQKVQFLRTSRGLNPKIFI--SDFKCKGTFLALGSELKNQFAIYKDGLIFISPYIGD 811 Query: 422 LSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAA 481 L + ++ + L++ + Y ++ D HP ++ +++ + HH +H Sbjct: 812 LKNIATFDRFLKLLQIFTDTYKLKFDCIIGDLHPNFLHTKYFEKQGFKVIKFQHHFSHLV 871 Query: 482 ACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDL 541 LAE+ G + + DG G G +G +WGGE + + + +L GGD Sbjct: 872 CALAENSLLKSGKKFLGFSFDGTGYGLDGHIWGGEVMIFDEFCFTRVTKFEEFSLIGGDN 931 Query: 542 AAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAV 601 A K ++ ++ +F E + + L + +E+ + SS GR FDA Sbjct: 932 AIKNIYKIAISLIFKFGIEKKAAKFLTKFDKNEVRNL-KILEKK--SIKTSSLGRIFDAF 988 Query: 602 AAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPV 661 A + C ++Y+GE+ LE L + + + + ++ ++Q + + V Sbjct: 989 ACVI-CHLDKITYDGESGMNLEKLYIQNYVKFYEFELK--NGEIKFGKVFEQIFSDEPCV 1045 Query: 662 NQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLF 719 A F + +A+ + + + +V SGGV N+ L R++ A Sbjct: 1046 A--ATKFINGIAELISKIALKYE-----NDVVLSGGVFQNKTLMNRISKNFAKIGRKFYA 1098 Query: 720 PQSLPAGDGGLSLGQG 735 P D G++ GQ Sbjct: 1099 NLENPTNDSGIAYGQL 1114 Score = 115 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 49/81 (60%) Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 +L +IAP+L+++G+ LP L LL + PL+ TS N+SG+P + + L L + Sbjct: 349 KLAQNIAPNLDKIGIFLPNTGLHLLLFEYFSNPLIATSANISGEPIIFNEDVLLKKLFNV 408 Query: 345 ADGFLIHNRDIVQRMDDSVVR 365 D +L +NR+I+ DDS+ + Sbjct: 409 VDFYLDNNREILTPSDDSIAQ 429 >UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZV5_9PROT Length = 391 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 130/385 (33%), Positives = 192/385 (49%), Gaps = 20/385 (5%) Query: 381 ALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQN 440 ++ALP GF+ L LG +LK++ CL+R A LS +GDL + I + + + Sbjct: 8 SVALPAGFEAAAETLALGGELKSSICLIRHGTAGLSVAIGDLEQEDIYRHFLASAESV-- 65 Query: 441 IYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDV 496 + + + D HP Y+S+++ A E++LP Q V HHHAH AA +A++ PLD V Sbjct: 66 LTACKAEQIAIDRHPDYLSTKYGQQLADELSLPLQQVQHHHAHIAAVMADNNLPLDCKSV 125 Query: 497 IALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR 556 + + LDG+G GE+G +WGGE L +YR + +G VA+PGG A +PWRN LA L Sbjct: 126 LGIALDGLGFGEDGTIWGGEFLLADYRGFQRVGRFQPVAMPGGAAAIHEPWRNTLAHLLP 185 Query: 557 FVP----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATL 612 + + + + +++ + G+NAPLASSCGR FDAVAAA+G + Sbjct: 186 LWDTVSTTFSDTDIIRFLNNKPVAMMHSMLASGLNAPLASSCGRLFDAVAAAVGLYRDRV 245 Query: 613 SYEGEAACALEALAASC---HGVTHPVTMPRVDN--QLDLATFWQQWL---NWQAPVNQR 664 E +AA ALE A++C + + QL+ W + L Sbjct: 246 DCEAQAAIALEQAASTCFDRETARYNYQTSDENGCLQLNWRPMWLELLGDIQNGTDTGVI 305 Query: 665 AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQS 722 A FH + + T+ SGGV NRL+ L L ++L Sbjct: 306 AARFHRTIIDALHVTAVSLCRTHRVDTIALSGGVFQNRLISTHLPQALQQDGLSVLQHHQ 365 Query: 723 LPAGDGGLSLGQGVIAAARWLAGEV 747 +PA DGG+ LGQ V+AAA L +V Sbjct: 366 VPAHDGGICLGQAVVAAAIRLKEKV 390 >UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGS6_9HELI Length = 490 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 124/409 (30%), Positives = 186/409 (45%), Gaps = 50/409 (12%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---------REDPE 55 T + + G +QGVGFRPFV LA L+LHG V N + L RE Sbjct: 35 TQYSIHAEVFGMIQGVGFRPFVATLAHVLHLHGFVYNQSGSTLIALHISTQKECKRESIL 94 Query: 56 TFLVQLY--------------------------QHCPPLARIDSVEREPFIWSQLPTEFT 89 F L H P A I S+ + F Sbjct: 95 LFYTALLLACKYTINPGTQDLSIIQKASSILEHTHTPKQAYITSLHITIHTDTAHTQGFH 154 Query: 90 IRQS--TGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYD 147 I +S T + I D C +CL +M R Y YPF+ C +CG R++I+ +PYD Sbjct: 155 ILESNVTQHAIQAHIPLDTKVCESCLKDMRDENSRFYNYPFVACVNCGARYSILHQLPYD 214 Query: 148 RPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAE--QEAALQA 205 R T M+ LC CDK+Y++ ++RRFH +P++C C +E+ + H + A++ Sbjct: 215 RKNTSMSDMALCIDCDKDYKNLVNRRFHTEPLSCNNCAIKVEFYRYNHHEKHYDLDAIKT 274 Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM-----LPVADGL 260 L IV KG+GGF +AR+ A+ +R+ K+R KP VM L L Sbjct: 275 LAKALMQNNIVLFKGLGGFAYIANARSKEALQKIRSIKNRLHKPFVVMANIPTLRTISLL 334 Query: 261 PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL--QCPL 318 LLT+ APIV+V K L ++++ L +GV++P + LL L + Sbjct: 335 TPQLESLLTSKEAPIVIVPKHPQYNLSNEVSS-LQTIGVVIPYTAMLTLLFSYLSPDFAM 393 Query: 319 VMTSGNLSGKPPAIS-NEQALADLQGIAD--GFLIHNRDIVQRMDDSVV 364 + TS N G+ A + + AL + IA+ L +NR+I+ +DDS++ Sbjct: 394 IYTSANNKGEMIATTLHNLALDRIVDIAESLYILDYNREILNCVDDSIL 442 >UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Burkholderiales RepID=HYPF1_RALEH Length = 394 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 122/374 (32%), Positives = 172/374 (45%), Gaps = 19/374 (5%) Query: 384 LPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD 443 P + PVL GA LKN CL+RG + + S GDL D +++ + + Sbjct: 5 TLPAGSDHAPVLACGAWLKNAACLLRGAEVLWSPIHGDLGDPANCDALDQSVEQLLDSAH 64 Query: 444 FTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 Q V HD HP + S+Q A+ + +P V HHHAH AA +AE+ VI L Sbjct: 65 GQVQAVAHDLHPDFYSTQLAQRLAARLCVPAVAVQHHHAHIAALMAEYDLR---EPVIGL 121 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 LDG+G+G +G WGGE L V+ E LG L ++ LPGGD+AA++PWR A Sbjct: 122 ALDGVGLGTDGTAWGGELLWVSPSEWCRLGHLQSLPLPGGDVAAREPWRMAAAALHVLDR 181 Query: 560 EWQ-NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEA 618 + A V +Q +A +ER +N P +SS GR+FDA A ALG + + A Sbjct: 182 TGEIGRRYGAVVGEQAARTVAAMLERQLNCPRSSSAGRWFDAAAGALGVSVRQQAEAQAA 241 Query: 619 ACALEALAASCHGVTHPVTMPRV----DNQLDLATFWQQWLNWQAPVNQRAWA-----FH 669 A ++ P + D LDL +Q A FH Sbjct: 242 IALEALAADYLSALSPPECVGTYVVDQDGVLDLRGLLEQLFALADEGQAGQAARGAALFH 301 Query: 670 DALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGD 727 ALA+ + A G+ T+ GG N +L A + LA L P+++ GD Sbjct: 302 VALAEALVGWAADAAQGHGLKTVALGGGCFMNGILSASVQAGLAARGLQALLPRAVSCGD 361 Query: 728 GGLSLGQGVIAAAR 741 GL+LGQ +AA + Sbjct: 362 AGLALGQAWVAARQ 375 >UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Magnetospirillum RepID=Q2W6T0_MAGSA Length = 358 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 110/353 (31%), Positives = 156/353 (44%), Gaps = 11/353 (3%) Query: 389 KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQY 448 + VPPVL +GA LKN C+ RG +A++S + GDL + + + TP Sbjct: 13 RAVPPVLAVGAFLKNAVCVTRGAEALISANHGDLGTPEAIAAFEACVEALVAEAGVTPVR 72 Query: 449 VVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 V HD HP + +++A+ ++LP V H A A G VI ++ DG G+G Sbjct: 73 VAHDLHPDFHCTRYAQSLDLPQVPVQ---HHHAHAAAIAAEHGIEGPVIGVSFDGFGLGP 129 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 WGGE L LG L + PGGD AA++PWR + + + +E Sbjct: 130 GNQSWGGELLLAEGAHYRRLGHLALLPQPGGDRAAREPWRMAASVLHK-LGRGPEIAERF 188 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 ++L + ++R +N+P SS GR FDA LG P +E +A ALEAL + Sbjct: 189 K-DIPAAAMLGQMLDRRLNSPETSSAGRLFDAACGLLGLHPIA-EFESQAPMALEALVTA 246 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 + P D LDL + PV + A FH L A + + A G Sbjct: 247 PEVL--PTGWILQDGVLDLLPLLACLAHCTDPV-RGANLFHGTLIAAMAKWIGDVAATAG 303 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 + GG N++L L L L + GD GLSLGQ IAA Sbjct: 304 TPYVTLGGGCFLNKVLTGGLVDRLTALGLRPLTAAKVSPGDAGLSLGQAWIAA 356 >UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thauera sp. MZ1T RepID=C4KD95_THASP Length = 447 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 120/409 (29%), Positives = 159/409 (38%), Gaps = 55/409 (13%) Query: 387 GFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 G P+L LGA K+ CL+ +A +LGDL + A + Sbjct: 39 GLPEALPILALGAWFKHAACLLEDGRAQFGPNLGDLDNADACRAVEPAALALLARAATPV 98 Query: 447 QYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 + + HD HP + S++ A + +P V HHHAH A LAEH D V+ L LD Sbjct: 99 RAIAHDLHPDFHSTRVACALAARLGVPAIGVQHHHAHVGAVLAEHG-RFDARPVLGLALD 157 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G+G+G +G WGGE L V E LG L + LPGGD AA++PWR A Sbjct: 158 GVGLGTDGEAWGGELLWVAGGEFVRLGHLRPLRLPGGDRAAREPWRMAAALLHASGR--G 215 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + Q ++LA+ + R +P +SS GR FDA A LG + E EAA AL Sbjct: 216 DEIARRFPGQPAAALLAQVLARPALSPPSSSLGRHFDAAAGLLGLC-EVMHNEAEAAIAL 274 Query: 623 EALAA-------------------------------------------SCHGVTHPV--T 637 E LA+ HP Sbjct: 275 ERLASGTAAPEVTPGDWRICDAGGALRGQADGARSRTDRGAPAAGSVPQPDDRAHPYAGA 334 Query: 638 MPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 P L + + A F LA A + E G T+V SGG Sbjct: 335 QPPGGTLELDLHPLLLRLADEPEPARGAARFQATLAAALVAWVEEARQRTGCATVVLSGG 394 Query: 698 VIHNR--LLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 +HNR A F +L + L GD GL+LGQ +A R A Sbjct: 395 CLHNRLLADALHAALPARGFEVLGARRLSPGDAGLALGQAWVAMHRLAA 443 >UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHI7_9HELI Length = 542 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 92/376 (24%), Positives = 142/376 (37%), Gaps = 49/376 (13%) Query: 396 CLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHP 455 GA K++ ++S ++GDL +R+ Y TPQ ++ D H Sbjct: 177 AFGAMQKSSIAFGFHNHIIVSPYMGDLFTPYNVANFRKTYDYFSTNYG-TPQALIADIHN 235 Query: 456 GYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGA 511 Y+S+Q A+E+ +P V HHHAH A L E + + DG GMG++G Sbjct: 236 QYISTQIAKEIAKDSKIPLFQVAHHHAHFNALLLESSMKGG----VGVIFDGSGMGDDGT 291 Query: 512 LWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ 571 LWGGE L + ++ E + + GG+ K R + + +S Sbjct: 292 LWGGEFLCGDSKQVERILHFKPFRILGGEKHIKDCKRLAYSYAICNDIAPLKAFIESSYD 351 Query: 572 QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG 631 + L + G N+PL SS GR FD LG LSYE ++ E +A++ Sbjct: 352 ENERKALQALHDTGFNSPLCSSVGRLFDIAGFILGL--ERLSYEAQSG---ELIASNTLK 406 Query: 632 VTH-------------------------PVTMPRVDNQLDLATFWQQWLNWQ---APVNQ 663 + + P N +D++ + Q + Sbjct: 407 LAYDILTHKNQTINYNTLMQTFSNMPYNPYPFHITQNMIDMSECIEMMFKDQQTSKNSDM 466 Query: 664 RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQ 721 A F D LA ++ G F GGV N L R+ L + FP Sbjct: 467 IAARFIDTLAYCILESLKRI----GTDYAFFGGGVFANYALCIRVKKLLHTHNIKAFFP- 521 Query: 722 SLPAGDGGLSLGQGVI 737 LP D +S+GQ + Sbjct: 522 KLPCSDYSISIGQLMY 537 >UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H082_STRCL Length = 286 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 125/235 (53%), Gaps = 30/235 (12%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 ++ ++G VQGVGFRPFV+ LA L L G V N GDGV + P+ F ++ Sbjct: 13 RRRVAVQGLVQGVGFRPFVFALATGLGLSGHVTNTGDGVLAEVEGPPDAVDAFCRRIVSD 72 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN------------------------- 99 PPLA + +V +E + F I S+ Sbjct: 73 APPLADVAAVRQEEIRATGA-RGFAIAPSSRAGTGRGTDRGTDRGGGRDPDGAGGRGAGR 131 Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I PD ATC ACLAE+ P +RR+R+PFI CT CGPRFTI+ A+PYDR T MA FP+C Sbjct: 132 TLIPPDTATCAACLAELRNPADRRFRHPFITCTDCGPRFTIVTALPYDRAHTTMAGFPMC 191 Query: 160 PACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHG-EHAEQEAALQAAIAQLKMG 213 AC +EY DP DRRFHAQPV+C +CGP L ++ G + AL A L G Sbjct: 192 RACAREYADPADRRFHAQPVSCHDCGPRLTLIAPGAPRRTGDTALVEARRLLAAG 246 >UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina EX-H1 RepID=C0QPN6_PERMH Length = 709 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 31/356 (8%) Query: 25 FVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLARIDSVEREPFIW 81 F+ Q+A++ + G V + D + + + E F+ +L P + I Sbjct: 22 FIKQVAERNGIKGYVSREDDRILIISQGSEEQLTSFMEELGSKMP-FSIFMRSSSTEVID 80 Query: 82 SQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTI 140 F I+ I+P + + C CL E P +RR+ YPFI+C +CG ++ Sbjct: 81 HPEEKGFHIKNED-----LNIIPLNRSVCINCLEESLNPTDRRFFYPFISCNYCGSQYAF 135 Query: 141 IRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH---- 196 + P++R TV F C C KEY + R+ + ++CP+C + + S + Sbjct: 136 LFEYPFEREKTVFKFFHPCENCKKEYENSSSFRYRYELISCPDCFAPVFYRSKSKERIAF 195 Query: 197 --AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML 254 E+E A + GK V +K G+ + N + +R + KP+ V++ Sbjct: 196 TPEEREKLFNAIAGLVSEGKPVKVKTANGYKVIGTIHEEN-IKKIREIEKTGRKPVTVLI 254 Query: 255 PVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 L D A + L++ P+V + K L D+ V L +P+ Sbjct: 255 TDISKLDDIAYVNDTQIKALSSQERPVVKLQAKDAF-LERDLVSQTGFVNFKLVDDPVLS 313 Query: 309 LL---LQELQCPLV----MTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 + L+E P + ++ NL + ++ + ++Q + F + +R +++ Sbjct: 314 FIAFFLKERGIPYIFIHDISEDNLDKINDGLDHDVPIVNIQKDTEVFTVGDRILIK 369 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 9/142 (6%) Query: 601 VAAALGCAPAT-LSYEGEAACALEALA-ASCHGVTHPVTMPRVDNQ----LDLATFWQQW 654 ++ LG LSY E A E A V + + LD T + Sbjct: 563 ISVILGAFEQNDLSYFEEPAEIFENKALDYPKRKALKVDFFLYEEEGVFYLDWRTTLRSL 622 Query: 655 LNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 ++++ + +++F + L + + T I LV +G + N +L R+ + Sbjct: 623 MSYKIAGTDIPMLSYSFFEGLGEWIVNQSQTALTKLKINNLVLAGDLFSNPVLTGRILKH 682 Query: 712 LADFTLLFPQSLPAGDGGLSLG 733 L D +L + LP ++ G Sbjct: 683 LPDRNILLNERLPIDVQNIAFG 704 >UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNN4_9SYNE Length = 295 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 23/266 (8%) Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR----VNYRE 524 P HH+AH +C+A+HQ V+ + DG G G+N LWGGE L+ Sbjct: 37 PLVPFQHHYAHILSCMAKHQLK---APVLGVAWDGNGAGKNSTLWGGEFLQPTQDGTQYG 93 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCL----RFVPEWQNYSETASVQQQNWSVLAR 580 E + LPGG+ + +P R+ L E + + + + L + Sbjct: 94 FERVAHFLPYYLPGGESCSLEPRRSALGLLYGCYGEAAFEMTDLAPIQFFTKSQLTTLQK 153 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPVTM- 638 + + +N SS GR FD VA+ L + +EG+AA LE A + +P T+ Sbjct: 154 TLTQKVNVSATSSVGRMFDGVASLLNLHHY-VGFEGQAALTLEFAATQSSTRSVYPFTVT 212 Query: 639 PRVDNQLDLATFWQQWLNWQAPV---NQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 N +D +Q + A FH+ L ++ E + + +V + Sbjct: 213 DTYPNIIDWRETFQSIVEDCRNAVMTPVIAAKFHNTLV----EIVVEISHRTNNSQIVLA 268 Query: 696 GGVIHNRLLRARLAHYL--ADFTLLF 719 G N++L R L FT + Sbjct: 269 GSCFQNKILIERAIRRLSAEGFTPYW 294 >UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum RepID=Q97TF8_CLOAB Length = 477 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 14/216 (6%) Query: 158 LCPACDK-EYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKI 215 LC C K ++++PL+R FH + + C P L V + +A ++ A LK I Sbjct: 8 LCDRCLKNKHKNPLNRLFHIEEICLKNCIPPLTLVDNKYNAINSLNIIEKAYKLLKSANI 67 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLT 269 +AIK GGF+L C+ ++ A+ TLR RK R +KP AVM+ + + +++L Sbjct: 68 LAIKDTGGFYLICNGKSRAAINTLRRRKMRQSKPFAVMMKDIYTVREFCEVHSEEKKVLE 127 Query: 270 TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL-QELQCPLVMTSGNLSGK 328 + PIV++DKK L ++I+P+L +GVMLP +P+ L+L ++L ++ S N+ Sbjct: 128 SSERPIVILDKKPSLNLPNNISPNLKSIGVMLPFSPISRLMLQKDLDVLIITKSSNIE-- 185 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 + NE A +L+ IAD FLIHNR+I + VV Sbjct: 186 ---LKNETAFKNLKNIADYFLIHNREISVPLKTPVV 218 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 22/217 (10%) Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAK-QPWRNLLAQCLRFVPEWQNYSETASVQQ 572 GGE +E + V L G K P + ++ F ++ Sbjct: 265 GGEFFIKTNKEFKMAAHFQYVTLQG-----KPSPLSSAISYLHFFKYNPDSFIA------ 313 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 N + A+E+ N+ L SS FFD +++ L +Y GEAA ALE++A + Sbjct: 314 -NTGITTNALEKNSNSCL-SSIDHFFDCISSLLDIVHTN-TYAGEAAQALESIADATTKD 370 Query: 633 THPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMR 687 + + ++ +D+ + L + + A FH+ + + + + Sbjct: 371 YYKYRIKNENSAFVIDIKNILRGVLIDILIKKEKSMIATKFHNTIYHITCQMALILSKLY 430 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQS 722 GI ++ SG N+ L ++ L + + F Sbjct: 431 GINKIILSGTTFQNKRLLEDVSKGLKKENLRVYFNSK 467 >UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUF6_SULAA Length = 658 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 26/295 (8%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPPLARIDSVEREP 78 F P + ++ ++ + G V +G+++ + + + TF+ L P + E Sbjct: 19 FLPLIKRIGEKEGIKGYVERTLEGIKIVISSNEDKVKTFMEVLGSKLPVSFFMSDASVEI 78 Query: 79 FIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCGPR 137 +F I+ I+P + CP+C E+ P +RY YPFI+C+ CG + Sbjct: 79 SEEEITNEDFFIK-----NETLNILPVNYGLCPSCTQELLNPNSKRYLYPFISCSFCGFQ 133 Query: 138 FTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA 197 ++ + P+DR T+ F +C C +EY R+ +C EC + + E Sbjct: 134 YSYLFYYPFDRKNTIFKYFQMCDNCQQEYDSKFSFRYKYPLTSCYECFIPVSFYEDNEEV 193 Query: 198 ------EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLA 251 L ++ GK + +K + G+ N+ + P K Sbjct: 194 LSLNPQSNLNILLKVAEYIENGKDILLKTLNGYKSISKHFQPNSYILITN----PEK--- 246 Query: 252 VMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 + L + +LL + P V + K ++I +LN + P +PL Sbjct: 247 --ISDIAYLSNKEVRLLASIEKPSVKLQLKEEFSKKENI--NLNFWYLKFPDDPL 297 >UniRef50_C4V235 Putative uncharacterized protein (Fragment) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V235_9FIRM Length = 211 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 11/206 (5%) Query: 547 WRNLLAQCLRFVPEW--QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 WR L R + + A+ W +L +A G++APL SS GR FDA AA Sbjct: 1 WRLALWMLYRRDGAGFAAQFPQFAAQLPTGWELLMQATAAGLSAPLTSSAGRLFDAAAAL 60 Query: 605 LGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QLDLATFWQQWLNWQAP- 660 LG A +YEG+A LE LA + + + +D+ + Sbjct: 61 LGVAYRN-AYEGQAPIELERLARTARRAGRVLPYTVAEGARLTVDVLPALYALADGAEAL 119 Query: 661 -VNQRAWA---FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT 716 V +RA FH +A A ++ + G+ T+ +GGV N LL L + + Sbjct: 120 TVEERAGRALDFHVTMAAAVAEVLGILSVRTGLRTVALAGGVFQNALLLEELLPRIGGYH 179 Query: 717 LLFPQSLPAGDGGLSLGQGVIAAARW 742 +L P +P DGG++ GQ +A AR Sbjct: 180 VLLPHRVPPNDGGIAYGQAAVALARM 205 >UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFV3_ARCPR Length = 289 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 91/234 (38%), Gaps = 30/234 (12%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + E+ L+ +K GK+VA + L +A + NAV L K RP K Sbjct: 3 KIYKVDPRNPDESVLREVAHMIKEGKLVAYPTETVYGLGTNALDENAVKRLFEVKGRPKK 62 Query: 249 PLAVMLPVADGL------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 P++V++ D + + A +L+ PI ++ KK + + +++G+ L Sbjct: 63 PVSVVVSDLDHVERIAEPNETALKLMEKFFPGPITIIVKKKK-VIPPIVTAGTDKIGIRL 121 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P + L + P+ TS N+SGKP E + D G D L Sbjct: 122 PDYKIPLKLAEFSGVPVTSTSANVSGKPSPTKPEHIMVDFMGKIDAILD----------- 170 Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +GE + V D P P VL +GA N V GE VL Sbjct: 171 -----AGETPLKIESTVIDTTTEP------PRVLRVGALPLNEIEKVVGEVEVL 213 >UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paenibacillus RepID=C6D5G7_PAESJ Length = 356 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 19/213 (8%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGL- 260 L+ A + L+ G++VA + L DARN+ AV + K RP PL V + + L Sbjct: 22 LEEAASLLRDGELVAFPTETVYGLGADARNTTAVEGIFKAKGRPSDNPLIVHIADENQLA 81 Query: 261 ------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P+ A +L+ P+ +V + + L VG+ +P +P L+++ Sbjct: 82 ELVLPYPELAGRLMKELWPGPLTIVLPVRTGAVSPLVTAGLTTVGIRMPDHPAALALIRQ 141 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN------RDIVQRMDDS----V 363 CP+ S N SG+P L DL G G + V + DS + Sbjct: 142 SGCPVAAPSANRSGRPSPTLAAHVLEDLAGKISGIVDGGATGVGLESTVIELPDSNTIRI 201 Query: 364 VRESGEMLRRSRGYVPDALALPPGFKNVPPVLC 396 +R G + R P+A+ P N Sbjct: 202 LRPGGITAEQLRSAAPEAVIDAPAAANPDVTEA 234 >UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6_LISW6 Length = 345 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 10/187 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV---- 252 ++ Q A L+ G+ VA + L DA N A+ + K RP PL V Sbjct: 13 SNQSIYQEAAKLLQKGECVAFPTETVYGLGADATNQAAIQKIYTAKGRPSDNPLIVHIAR 72 Query: 253 ---MLPVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 M + P A QL+ P+ L+ L +++ L+ VGV +P +P+ Sbjct: 73 REQMDQFVESYPPKAIQLMEKFWPGPLTLILPLIKDSLAANVSAGLSTVGVRMPEHPVSL 132 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L++ P+ S N SGKP + + DL G G + ++ +V+ S Sbjct: 133 DLIKTANIPVAAPSANRSGKPSPTTAAHVIEDLDGKIAGIIDGG-PTGVGLESTVIDCSQ 191 Query: 369 EMLRRSR 375 E R Sbjct: 192 ETPVILR 198 >UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular organisms RepID=YWLC_BACSU Length = 346 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 12/192 (6%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 E + + + A A L+ ++VA + L +A+N++AV + K RP PL V Sbjct: 12 DELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIV 71 Query: 253 MLPVADGL-------PDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 + L P+ A+ L+ P A +++ K L + L V + +P Sbjct: 72 HIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPD-ALSPRVTAGLETVAIRMPD 130 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 +PL L++E P+ S NLSGKP E DL G G + ++ +V Sbjct: 131 HPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGG-PTGIGVESTV 189 Query: 364 VRESGEMLRRSR 375 + + ++ R Sbjct: 190 LSCADDIPVLLR 201 >UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacteria RepID=B0TI69_HELMI Length = 422 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 21/225 (9%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 L+ A A L+ G +VA + L DA + AVA + K RP PL V Sbjct: 14 DPRQVSAEGLREAAACLQAGGLVAFPTETVYGLGADALQAEAVAAIFTAKGRPSDNPLIV 73 Query: 253 MLPVADGL-------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + D + P AR+L P+ LV P++ + L V V +P++ Sbjct: 74 HIADRDDVARLTVGFPALARRLAERFWPGPLTLVLP-ASPQIPAVVTAGLATVAVRMPSH 132 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 P+ L+ E P+ S N SG+P + DL G DG + D ++ +VV Sbjct: 133 PVARALIGEAGTPVAAPSANRSGRPSPTTAAHVWEDLGGRIDGIVDGG-DCDLGLESTVV 191 Query: 365 RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 +G++ A+ L PG + LG ++ F R Sbjct: 192 DATGDV----------AVILRPGGVTREMIEALGLPVRTAFAAER 226 >UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z824_BREBN Length = 359 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 16/226 (7%) Query: 187 HLEWVSHGEHAEQEAA-LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + V + + A + A L+ G +VA + L +A ++ AV + K R Sbjct: 8 KVWSVDNDVENQPSCAQIVDAARFLREGAVVAFPTETVYGLGANALSNEAVEKIFTAKGR 67 Query: 246 P-AKPLAVML-------PVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLN 295 P PL V + VA +P+ ++L+ P V++ K ++ + L+ Sbjct: 68 PSDNPLIVHIGAWDQLSTVASEVPEKGKKLMEAFWPGPLTVILPK--TDQVASLVTAGLD 125 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 VGV +P +P+ L++E P+ S N SG+P + LADL G G + Sbjct: 126 SVGVRMPDHPIALALIKEAGVPIAAPSANRSGRPSPTTAAHVLADLDGRVAGVVDGGATG 185 Query: 356 VQRMDDSVVRES--GEMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 V ++ +V+ + M+ R G + + G+ + P +GA Sbjct: 186 V-GVESTVIDVTQDPPMILRPGGITREQMEPVIGYVELDPSFQVGA 230 >UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firmicutes RepID=B8I564_CLOCE Length = 359 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 10/161 (6%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVA 257 E AL+ A LK G VA + L +A + AV+ + K RP PL V + Sbjct: 14 NENALKPAAEALKQGMTVAFPTETVYGLGANALDGIAVSKIFKAKGRPSDNPLIVHIADR 73 Query: 258 DG-------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 + +PD A L+ P+ LV KK + +I L+ VG+ +P +P+ Sbjct: 74 EKVSELTSFIPDKAVALMDKLWPGPLTLVMKK-SSVIPKEITAGLDTVGIRMPEHPVALE 132 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 L++ P+ S N+SGKP + + L DL G + + Sbjct: 133 LIKLAGIPVAAPSANVSGKPSPTAAQHVLDDLDGKIEMIVD 173 >UniRef50_A6QAV0 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAV0_SULNB Length = 641 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 104/282 (36%), Gaps = 51/282 (18%) Query: 52 EDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPA 111 E E FL+ L P A I + + + P I++ + + + CP+ Sbjct: 49 EKIEPFLLGLNDTLP--ASIFLGKSRHYFSEKKPEVTKIKK-------ISMPLNISLCPS 99 Query: 112 CLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYR-DPL 170 C EM RRY YPF +C C + + A PY R + M C AC +E + +PL Sbjct: 100 CQKEMFDVSSRRYYYPFTSCNSCASQHPFMTAYPYKRANSTMKFLVPCDACHQEMKNNPL 159 Query: 171 DRRFHAQPVACPECGPHLEWVS------HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGF 224 + + ++C +CG L+ + + + A +K GK V +K G+ Sbjct: 160 RKDY--PLISCVDCGISLKMNDGKSERYANDKGSYRKLFEVSAAAIKKGKSVLMKTANGY 217 Query: 225 HLACDARNSNAVATLRARK------HRPAKPLAVMLPVADGLPD------AARQLLTTPA 272 RK P + +++ A GL + L + Sbjct: 218 -----------------RKFYFPSGGTPLEGSVLLMADAKGLNEHLMMVTQEFNALMSIE 260 Query: 273 APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 P L+ ++ + + V V P + + LL +EL Sbjct: 261 RP--LLRVSTKSDVLKALYG--STVLVKYPDDGMTMLLAREL 298 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 79/251 (31%), Gaps = 43/251 (17%) Query: 480 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGG 539 + LAEH G I + D L N +E + +P Sbjct: 419 MMSVLAEHGV--LGEQAIGIHFDSSLY----------FLYYNRKEV--INAVPPNP---- 460 Query: 540 DLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ-QQNWSVLARAIERGINAPLASSCGRFF 598 + + S+ V ++ + + ++ F Sbjct: 461 ---------FEADHLFEHISALREGSDRLVVNYRKAYPKICERLDSLNGDVD------IF 505 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQ 658 A LG S+EG +A EAL+ G + +N+ D F +++Q Sbjct: 506 TVTAIMLGLKEE--SFEGISA---EALSFLGKGGIQ-IDTRVNNNRFDNYAFLASIMSYQ 559 Query: 659 ---APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADF 715 ++ +++ A ++ + + +G N+ L AR+ ++ Sbjct: 560 LGTVESTLMCYSIYESFGDYIAEVVSQLLEKTKAKNVTLTGETFANQALYARIQRHMGTR 619 Query: 716 TLLFPQSLPAG 726 LLFP + P G Sbjct: 620 NLLFPVNYPIG 630 >UniRef50_A6Q3L8 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3L8_NITSB Length = 337 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 70/191 (36%), Gaps = 29/191 (15%) Query: 47 EVRL--REDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN--TQI 102 + + E+ E F L H S I + + T I Sbjct: 37 FIYVTFEENIEEFTKALDLHL--------------YNSIFFKNVQICEENPSAKDSLTYI 82 Query: 103 VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPAC 162 A CP C+ EM P RR+ YPF +C CG + + P++RP T++ F C C Sbjct: 83 PSSIALCPNCIKEMLDPESRRFYYPFTSCNSCGYQSGFLFHYPFERPNTLLNFFKPCNEC 142 Query: 163 DKEY-RDPLDRRFHAQPVACPECGPHLEWVS--------HGEHAEQEAALQAAIAQLKMG 213 +E +P R + + C EC L+ E E + A LK G Sbjct: 143 QEELKTNPF--RENYPLITCTECNIPLKLSDKKGSKVLFANEKEEYKQIFDIAANALKDG 200 Query: 214 KIVAIKGIGGF 224 K V IK G+ Sbjct: 201 KRVRIKTFRGY 211 >UniRef50_C7GYT3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYT3_9FIRM Length = 339 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 11/209 (5%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVA 257 + ++ A ++ G VA + L +A + +A+ + K RP PL V + Sbjct: 9 DKEGMEKAANIIRTGGTVAFPTETVYGLGANALDPDAIEKIYKAKGRPSDNPLIVHISDI 68 Query: 258 DGL----PDAARQLL----TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 L D + +L P+ LV KK ++ D + L+ V V +P++ + Sbjct: 69 SELQGVASDVDKHILAIANEFWPGPLTLVCKKSA-DIPDQVTGGLDTVAVRMPSSSIARE 127 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 ++ P+ S N SGKP S + DL G D ++ + D ++ +V+ +G Sbjct: 128 FIRSAGVPIAAPSANKSGKPSPTSTSHVIDDLNGKIDAVIMGD-DSDIGIESTVISVTGG 186 Query: 370 MLRRSRGYVPDALALPPGFKNVPPVLCLG 398 + R V + + + L G Sbjct: 187 KVNVLRPGVIGEVEIRGCLEKSGYKLSSG 215 >UniRef50_A7HKY2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKY2_FERNB Length = 331 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 14/192 (7%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 + A LK G +VA + L A N AV + K RP PL V + D + Sbjct: 20 ISYACEVLKSGGLVAFPTETVYGLGATATNPEAVKKIFQVKGRPADNPLIVHVSSVDEIE 79 Query: 262 DAARQ-------LLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 + A + PI V KK + ++ L VGV +PA+P+ L+ Sbjct: 80 NIAYLSEKYIDIIKKVTPGPITFVLKKKE-NIPSEVTAGLETVGVRIPAHPVAQKLIN-C 137 Query: 315 QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRS 374 P+ S N SGKP + DL G+ + + + ++ ++V + + Sbjct: 138 SGPIAAPSANRSGKPSPTDANAVIEDLNGLVECIIDAG-ECAFGIESTIVDLTKDFPVVL 196 Query: 375 RGYVPDALALPP 386 R P + L Sbjct: 197 R---PGPITLEE 205 >UniRef50_Q8TXM7 Translation factor (SUA5) n=1 Tax=Methanopyrus kandleri RepID=Q8TXM7_METKA Length = 212 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 8/162 (4%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPL--AV 252 E A++ + L+ GK+VAI + L+CDA NS AV L A K RP KP+ AV Sbjct: 6 EEEDPHAVKHVVRALRAGKLVAIPCDTVYSLSCDATNSEAVRRLYAAKERPKDKPVSVAV 65 Query: 253 M-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 L + + +P L T P+ +V + + ++A +GV +P +P Sbjct: 66 HSPEKALELLEPVPRLEAALETLTPGPVTIVAPRRPGVVAPEVAAGRRTLGVRIPDHPFF 125 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +++ P+V TS N+SG+P ++ L D + Sbjct: 126 LRVVRRFGKPIVTTSANVSGRPAPTDPDEVFEQLGDRLDILV 167 >UniRef50_B3DXI5 Putative translation factor SUA5 n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXI5_METI4 Length = 324 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 11/193 (5%) Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPL 250 + E + A++ A+ L G++VAI + LA D N AVA + K RP P+ Sbjct: 3 DKEFNLEIKKAIEKAVDLLNKGEVVAIPTETVYGLAADGLNPEAVARIFELKKRPKIDPV 62 Query: 251 AVMLPVAD-------GLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 V LPD AR L + P+ LV KK + D + L G +P Sbjct: 63 IVHCSSLKEVGFYVCDLPDEARILGESFWPGPLTLVLKKKES-IPDIVTAGLPFAGFRVP 121 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +PL L+Q+ PL S N GK + + + I L ++ + Sbjct: 122 KHPLTLELIQKFGRPLAAPSANKFGKISPTTAQAVYEEFDQIIPFILDGG-PCQVGIEST 180 Query: 363 VVRESGEMLRRSR 375 VV + R Sbjct: 181 VVSFAQIPPLLLR 193 >UniRef50_A4XJN5 Translation factor SUA5 n=2 Tax=Clostridia RepID=A4XJN5_CALS8 Length = 348 Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 14/206 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV----- 256 L A LK G +VA + L +A AV + K RP PL V + Sbjct: 16 LSKAAQILKEGGLVAFPTETVYGLGANALLKEAVDKIFVAKGRPQDNPLIVHISSKKMLD 75 Query: 257 --ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 A + +L+ P+ +V K + D++ LN VG+ +P N + L++ Sbjct: 76 MCAKVTDERVYKLIEKFWPGPLTIVLPKKE-CIPDNVTAGLNTVGIRMPNNKIALELIEL 134 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRR 373 P+ S N+SGKP + + DL G D + ++ +V+ S Sbjct: 135 AGVPVAAPSANVSGKPSPTEAQHVIEDLFGKVDVIIDGG-KCSFGLESTVIDLSSSKPYI 193 Query: 374 SR-GYVPDAL--ALPPGFKNVPPVLC 396 R G VP ++ + + P +L Sbjct: 194 LRPGAVPFSILKEILEDIEYDPSILA 219 >UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales RepID=A5VIP8_LACRD Length = 342 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 12/193 (6%) Query: 193 HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLA 251 + + A A +K G++VA + L DA N AV + K RP PL Sbjct: 1 MDTKIFRHGEIAQAAAAIKRGELVAFPTETVYGLGADATNEKAVKNVYLAKGRPSDNPLI 60 Query: 252 VML-------PVADGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 V + A +PD AR+L+ P + +++ K L + L V P Sbjct: 61 VHVNSIAMVEKYAAEIPDNARKLMDAFWPGSLTIILKIKK-GALSKTVTGGLKTVAFRYP 119 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 L++E P+V S N SGKP + + DL G G + N ++ + Sbjct: 120 DCQPTLDLIEEAGVPMVGPSANTSGKPSPTTAQHVYHDLHGKISGIVD-NGPTRVGVEST 178 Query: 363 VVRESGEMLRRSR 375 V+ S + R Sbjct: 179 VLDMSTDHPVILR 191 >UniRef50_Q2S263 SUA5 protein n=2 Tax=Rhodothermaceae RepID=Q2S263_SALRD Length = 330 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 20/204 (9%) Query: 205 AAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLP-------V 256 A +L+ G++VA + L DA +AV + K RP PL V L V Sbjct: 26 EAADRLRRGELVAFPTETVYGLGADAFQPDAVRRIFEAKGRPADNPLIVHLRRRDQIGQV 85 Query: 257 ADGLPDAARQLLTTPA-APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQ 315 A +P A+ LL A P+ L+ K+ +L + L VGV +P PL L+ Sbjct: 86 AARVPSVAQHLLDAFAPGPLTLILPKHE-DLPSVVTAGLETVGVRVPRLPLTQSFLEACD 144 Query: 316 CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSR 375 P+ S N SG+P S E DL G D L R ++ +VV + + R Sbjct: 145 TPVPAPSANRSGRPSPTSWEAVEHDLAGRIDCILQGGRT-DAGVESTVVDCTTDPATVLR 203 Query: 376 GYVPDALALPPGFKNVPPVLCLGA 399 P A+++ + LGA Sbjct: 204 ---PGAVSVESLRR------ALGA 218 >UniRef50_C4KYV0 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacillales RepID=C4KYV0_EXISA Length = 336 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVA 257 ++ + L+ G+I+A+ + LA DA N A+ + K RP PL V + Sbjct: 7 NSNEIEEGVRLLQAGEIIAMPTETVYGLAGDAMNDVAIRKIFEAKGRPSDNPLIVHIASI 66 Query: 258 -------DGLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 D +P A++L+ P A +++ + L+ +G+ +P +P Sbjct: 67 EQTSLFVDSIPPVAKRLMDAFWPGALTIILP--SNGRASSLVTAGLDSIGLRMPNHPAAL 124 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L+++ L S N SG+P + + DL G G + ++ +VV +G Sbjct: 125 ELIRKSGLGLAAPSANRSGRPSPTTAQHVADDLNGRIAGIVDGG-PTGIGVESTVVDCTG 183 Query: 369 EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 + + R P + + PV L A+L N Sbjct: 184 DTVTILR---PGGVTREEMEAVIGPV-ALDANLSN 214 >UniRef50_A7VH00 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VH00_9CLOT Length = 359 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 E E + A LK G +VA + L DA N A + + K RP PL V + Sbjct: 23 ENEELFRKASDILKSGGLVAFPTETVYGLGGDALNPKASEKIYSAKGRPSDNPLIVHIAD 82 Query: 257 -------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 + A+ L+ P+ ++ KK + + L V + +P++P Sbjct: 83 TASVWELVAEVSTQAQMLMEAFWPGPLTIIFKKKD-IVPHETTGGLETVAIRMPSHPAAM 141 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L+++ + S NLSG+P + DL G D L + ++ ++V +G Sbjct: 142 KLIKDSGVYIAAPSANLSGRPSPTTAAHVEEDLSGRIDMILDGG-PVGIGIESTIVDVTG 200 Query: 369 EMLRRSR 375 + R Sbjct: 201 DRPTILR 207 >UniRef50_C9KMA3 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Veillonellaceae RepID=C9KMA3_9FIRM Length = 352 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 11/186 (5%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV- 256 Q L A L+ G +VA + L + ++ A A + K RP PL + + Sbjct: 14 QREELARAGKVLRGGGLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLILHVSDR 73 Query: 257 ------ADGLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 A + A +LL PI L+ ++ + D I L+ VG+ +P +P+ Sbjct: 74 AMVEMIAAEVTPMAEKLLAAFMPGPITLILRRKA-IVPDRITGGLDTVGIRMPEHPVARA 132 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 +++ P+ S N+SG+P + L D+ G L ++ ++V +G Sbjct: 133 MIRAAGVPIAAPSANISGRPSPTTAASVLRDMDGRIPLILDGG-PCHFGVESTIVDCTGP 191 Query: 370 MLRRSR 375 + R Sbjct: 192 VAVILR 197 >UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RH22_ANAPD Length = 344 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 E ++ A L+ G++VAI + L + + A + K+RP PL + Sbjct: 9 DRENIDEDIIKRAAVLLRRGELVAIPTETVYGLGANGLDEKACLNIFKTKNRPADNPLIL 68 Query: 253 MLPV-------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 + + + D A++L+T P+ ++ KK + + + + V V P + Sbjct: 69 HISNKEMLYNLVEDVSDDAKKLMTLWPGPLTMIFKKSE-IIPEVVTAGGDTVAVRFPVDE 127 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR 365 + +++E P+ S N+SG+P + DL G + D ++ +V+ Sbjct: 128 IARRIIEEANIPIAAPSANISGRPSPTNASDCYYDLNGKIPLIIDGG-DCNIGIESTVID 186 Query: 366 ESGEMLRRSR 375 S + R Sbjct: 187 MSEDTPTILR 196 >UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cellular organisms RepID=A6TK48_ALKMQ Length = 356 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 12/197 (6%) Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP- 246 ++ E + + L A ++ GK VA + L +A +S A+ + K RP Sbjct: 7 IKLEEMNEK-QIDEILTACGEMIREGKTVAFPTETVYGLGANALDSKAINKIFVAKGRPS 65 Query: 247 AKPLAVMLP-------VADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVG 298 PL V + + +P+ A++L+ P+ LV +K + +I+ L+ V Sbjct: 66 DNPLIVHVAHRVEVDALVRVIPEKAKKLMAHFWPGPLTLVMEK-SHGIPGEISAGLSTVA 124 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 + +P +P+ L+++ P+ S N SGKP + DL+G D + Sbjct: 125 IRMPVHPIARTLIEKAGVPVAAPSANTSGKPSPTRAAHVIQDLRGKVDAIIAGG-PCDVG 183 Query: 359 MDDSVVRESGEMLRRSR 375 ++ +V+ + E R Sbjct: 184 VESTVLDVTEETPMILR 200 >UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinaceae RepID=Q46E17_METBF Length = 367 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 13/197 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 V ++ L+ A A +K G VA + L D N AV + K RP Sbjct: 11 TLVFRVSEENFDSVLERASAIIKRGGTVAFPTETVYGLGADGLNPEAVMKIFEAKKRPPG 70 Query: 248 KPLAVML-------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPD-LNEVG 298 PL++++ VA +P++A +L+ P+ ++ +K + DI L +G Sbjct: 71 NPLSLLVHSREDVEKVARNIPESAFRLMNAFWPGPLTIILEKND--IVPDITSGRLKSIG 128 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 V +P + + L++ PL S NLSGKP ++DL G D L Sbjct: 129 VRMPDHRVPLDLIKRAGTPLAAPSANLSGKPSPSLAAHVISDLTGRIDAILDGGEA-AIG 187 Query: 359 MDDSVVRESGEMLRRSR 375 ++ +V+ + E R Sbjct: 188 LESTVIDMTVEPPVVLR 204 >UniRef50_Q03EK3 Translation factor SUA5 n=78 Tax=Lactobacillales RepID=Q03EK3_PEDPA Length = 340 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 76/203 (37%), Gaps = 9/203 (4%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV- 256 +Q A +K G++V+ + L DA N AV + A K RP PL V + Sbjct: 6 SSDEIQVAAQAIKAGELVSFPTETVYGLGADATNPEAVKKVYAAKGRPSDNPLIVHVADQ 65 Query: 257 -----ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + D +++L+ P+ ++ L + L+ PA + L Sbjct: 66 TEVAKFANIDDKSKKLMDQFWPGPLTIILPIKKGALNSIVTGGLDTAAFRNPATQVTIDL 125 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 ++ PLV S N SGKP E L DL G G L + + ++ +V+ S Sbjct: 126 IRAAGVPLVGPSANTSGKPSPTKPEHVLHDLDGKIAGVLD-DGETTIGVESTVLDMSSTT 184 Query: 371 LRRSRGYVPDALALPPGFKNVPP 393 R AL P V Sbjct: 185 PSILRPGAITEQALAPLIGEVQT 207 >UniRef50_Q0SQY3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=Clostridium RepID=Q0SQY3_CLOPS Length = 350 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 11/176 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV----- 256 L+ A +K G I A + L +A + AV + K RP PL + + Sbjct: 18 LEEAAEIIKNGGIGAFPTETVYGLGANALDGEAVKKIFVAKGRPQDNPLIIHIADKKDID 77 Query: 257 --ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 +P A++L+ P+ ++ KK + D + L+ VGV +P + + L++ Sbjct: 78 KYVAEIPKYAQELMDKFWPGPLTIILKKKD-IVSDVTSAGLDTVGVRMPNDEIALKLIEL 136 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 P+ S N+SG+P E+ DL G D F+I + ++ ++V +GE Sbjct: 137 SGVPIAAPSANISGRPSPTDIERCEEDLNGRVD-FIIGAKKSEIGVESTIVDATGE 191 >UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8F9_MACCJ Length = 334 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 +Q I K G+ +AI + LA DA N AVA + K RP PL V + L Sbjct: 21 VQEIITGFKAGETIAIPTETVYGLAADATNREAVAAIFKAKGRPQDNPLIVHIHHLSQLE 80 Query: 262 -------DAARQLLT----TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 AA +L+ P + IV V + L + + LN V V +PA+ + H L Sbjct: 81 WFTHDIHAAAYKLMDYFWPGPISFIVPVKQ---GILAESVTAGLNTVAVRMPAHKVAHQL 137 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 ++ L S N SGKP E + D++G G + + + ++ +VV S Sbjct: 138 IEMTDLLLAAPSANTSGKPSPTKAEHVIHDMEGKIFGI-VQSEQVEVGIESTVVDCSQYP 196 Query: 371 LRRSR 375 R +R Sbjct: 197 FRIAR 201 >UniRef50_A9BIX5 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIX5_PETMO Length = 344 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 84/214 (39%), Gaps = 14/214 (6%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + +E ++ A +K K V + L + + NAV + K RP P Sbjct: 6 IDVDPLNIEEEKIKEAAQAIKEDKTVVFPTETVYGLGANGLSENAVRKIFEAKGRPYDNP 65 Query: 250 LAVMLPVADGLPD---AARQLLTTPAA----PIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 L + + + + LL PI V KK + D + + + + +P Sbjct: 66 LILHVSNVRSFLEYTYISYALLEKIERLLPGPITFVLKKRE-VVPDIVTAGKDTLAIRMP 124 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 A+P+ L++ + P+ S N+SGKP +E L D+ G D +I + ++ + Sbjct: 125 AHPVALKLIEYAEVPIAAPSANISGKPSPTMSEHVLKDMLGKVDYIIIGG-KVEFGVEST 183 Query: 363 VVRES-GEMLRRSRGYVPDALALPPGFKNVPPVL 395 ++ + G++ R P + + ++ Sbjct: 184 IIDLTQGKIPIILR---PGPIPPEKLKEIFGDII 214 >UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Ruminococcaceae RepID=D1PKX4_9FIRM Length = 339 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 25/232 (10%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVA 257 ++ A L+ G++VA+ + +A DARN +AV + K RP PL V + Sbjct: 9 SGESIALAAELLRQGELVALPTETVYGIAADARNGDAVRKIFEAKGRPQDNPLIVHICGM 68 Query: 258 DGL----PDAARQLLTTPAA----PIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 D L + + L AA P+ +V + E+ + L+ VGV +P++P+ Sbjct: 69 DMLQGIVSEVPERALKLAAAFWPGPLTMVMPRGA-EVSEVTCAGLDTVGVRMPSHPVVQA 127 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 +++ S NLSGKP + + LAD+ G L + ++ +VV +GE Sbjct: 128 VIKASGVAFAAPSANLSGKPSPTNAQDTLADMHGRLPLILDGG-ESAVGVESTVVSVTGE 186 Query: 370 MLRRSRGYVPDALALPPGFKNVPPVLC-LGADLKNTFCL---VRGEQAVLSQ 417 + L PG+ + LG +++ + + ++ + S Sbjct: 187 ----------HPILLRPGYITKEQMEAVLGEEVQVSPAILEKLKEGEVARSP 228 >UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX04_9FIRM Length = 377 Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 11/184 (5%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML----- 254 AA++ A+ L+ G++VA + L + ++ A A + K RP PL + + Sbjct: 14 AAIEEAVHLLRAGEVVAFPTETVYGLGANGFDAAACAKIYEAKGRPSDNPLILHIAHRAM 73 Query: 255 --PVADGLPDAARQLLTTPA-APIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 VA +P+ A LL A P+ LV ++ + D I L VGV +P N L+ Sbjct: 74 LDEVALDVPEMAEHLLAAFAPGPLTLVLRRCA-AVPDRITGGLATVGVRMPENDAALALI 132 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML 371 + PL S N SG+P + E L DL G L ++ ++V +GE Sbjct: 133 RAAGFPLAAPSANTSGRPSPTTAETVLEDLAGRIPLILDGG-PCRFGVESTIVDVTGEAA 191 Query: 372 RRSR 375 R Sbjct: 192 VILR 195 >UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ25_HALOH Length = 364 Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 14/210 (6%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 ++ A++ + L+ G++VA + L DA + +AV + K RP PL V + Sbjct: 24 KLKENDAIREGASLLQKGEVVAFPTETVYGLGADATSESAVKKIFKAKGRPRDNPLIVHI 83 Query: 255 PVADG--------LPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 D L D R+L+ P+ L+ +K + L V V P NP Sbjct: 84 GEMDQLYDIIKNPLSDTTRRLIKHFWPGPLTLIFEKKET-IPGVTTAGLESVAVRFPDNP 142 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV-- 363 + L+ P+ S NLSG P E DL+G + ++ +V Sbjct: 143 VARALIGLSSVPVAAPSANLSGSPSPTRAEHVFKDLKGRIPFIIDGG-PSSVGVESTVID 201 Query: 364 VRESGEMLRRSRGYVPDALALPPGFKNVPP 393 +R ++ R G + +A GF P Sbjct: 202 IRSGNPVILRPGGVTREEIAEVTGFSPENP 231 >UniRef50_C8WUG5 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUG5_ALIAD Length = 360 Score = 141 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 14/201 (6%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L A+ L+ L+ G +VA + L +A AV + A K RP Sbjct: 3 RLTVAGIRHEAQLREMLREPAQSLRRGGLVAFPTETVYGLGANALEEEAVRRIFAAKERP 62 Query: 247 -AKPLAVMLPVADGLPDA----------ARQLLTT-PAAPIVLVDKKYVPELCDDIAPDL 294 PL V + L D A +L+ P+ L+ L + P Sbjct: 63 RDNPLIVHIADDAKLRDVIDENQPLHEDAVRLMRAFWPGPLTLLLPAGA-RLAPSVHPGQ 121 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 VGV +P +P+ L+ E P+ S N SG+P + + +ADL G D +L+ Sbjct: 122 PLVGVRMPDHPVARALIAEAGVPVAAPSANRSGRPSPTTPDDVVADLDGRID-WLVDGGP 180 Query: 355 IVQRMDDSVVRESGEMLRRSR 375 ++ +V+ + R R Sbjct: 181 CPIGVESTVLLLEPDCARILR 201 >UniRef50_A6UX18 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Euryarchaeota RepID=A6UX18_META3 Length = 341 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 13/189 (6%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 + ++ A +K G +VA + L DA N +AV + K RP PL + + Sbjct: 4 KILNKNEIEIAANAIKDGDLVAFPTETVYGLGADALNPDAVEKIFKVKGRPIDNPLIIHV 63 Query: 255 PVAD------GLPDAARQLLT--TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 + + + A+ LL +P +++ KK V + +L+ V V +P N + Sbjct: 64 NNLEMANKIAHITENAKILLQKFSPGPLTIILKKKEV--VPAITCANLDTVAVRIPNNKI 121 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 L+++ P+ S NLSGKP + + + DL + + I ++ +V+ Sbjct: 122 ALELIEKANTPIAAPSANLSGKPSPTNIQHIIDDLGDKINYAIEGETTI--GVESTVLDL 179 Query: 367 SGEMLRRSR 375 + + + R Sbjct: 180 TEKKPKILR 188 >UniRef50_C9RAD4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAD4_AMMDK Length = 338 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 13/199 (6%) Query: 202 ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPV---- 256 AL+ A L+ G++VA + L A A+ + A K RPA KPL + L Sbjct: 17 ALEEAGELLRRGELVAFPTETVYGLGAAATQDEALRRVFAVKGRPARKPLTLHLADPEEV 76 Query: 257 ---ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ 312 +P AR+L+++ P+ L+ L + VG+ +P + + L++ Sbjct: 77 FRYVKEVPSTARRLISSFWPGPLTLILP-AASGLPPSLTAGGETVGIRVPDHAVAQELIR 135 Query: 313 ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE--M 370 PL S NLSG+P LA+L G G L ++ +VV GE + Sbjct: 136 MAGLPLAAPSANLSGRPAPTKAAHVLAELGGKIAGVLDGG-PTPLGIESTVVEVRGEELV 194 Query: 371 LRRSRGYVPDALALPPGFK 389 +RR +P+ + G K Sbjct: 195 VRRVGALLPEEIEERTGIK 213 >UniRef50_B8E005 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Dictyoglomus RepID=B8E005_DICTD Length = 338 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 12/197 (6%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR-PAKPLAV 252 + L+ A L+ G +VA + L DA N AV + K R P P+ V Sbjct: 8 DKENPDIEVLKKAAQVLEKGGLVAFPTETVYGLGADALNPEAVKKIFIAKGRPPDNPIIV 67 Query: 253 ML-------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + + + +P A +L+ P+ L+ K + D + +VG+ P N Sbjct: 68 HVGKKEQVYSLTENVPSIAEKLMEEFWPGPLTLIFYK-SNLVDDVVTAGSPKVGIRQPMN 126 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 + LL+ P+ S N+SG+P E + DL+ D + D+ ++ +V+ Sbjct: 127 KVALKLLEVFGKPIAAPSANVSGRPSPTKAEHVIEDLEDKIDIIIDGG-DVNFGVESTVL 185 Query: 365 RESGEMLRRSR-GYVPD 380 + + R G P Sbjct: 186 DITTDTPIIYRPGACPK 202 >UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ3_9FIRM Length = 337 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 23/229 (10%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADG 259 L A +K G++VAI + LA DA N +A A + K RP PL + + D Sbjct: 11 EVLCEAAELIKKGEVVAIPTETVYGLAADAYNPDACAKIFKAKGRPQDNPLIIHICDLDM 70 Query: 260 LPDAARQL----LTTPAAP-----IVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 L ++ +++ LT ++ KK + + D + L+ V V +P N L Sbjct: 71 LKNSVKEIPPLALTLAEHFWSGSLTMIFPKKDI--VPDTTSGGLDTVAVRMPDNEDTLNL 128 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV--RESG 368 ++ PL S NLSG P + + AD+ G + + ++ +V+ + G Sbjct: 129 IKMCGVPLAAPSANLSGSPSPTTAQHVYADMNGRIPLIIDGG-ECKNGVESTVICFTDGG 187 Query: 369 EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 ++ R V A L K KN F + V+S Sbjct: 188 TGIKVLRPGVITAEMLSRFAKTETD--------KNVFAKPDENEKVISP 228 >UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Thermotogaceae RepID=A8F706_THELT Length = 338 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 14/215 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + E L+ A +K G +VA + L D N +AV + K+RP Sbjct: 3 TLIKVDPLNPNEGILRKAAQTIKEGGVVAFPTETVYGLGADCFNISAVLKIFQIKNRPAD 62 Query: 248 KPLAVMLPVADGLPDAARQLLTT--------PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL + + L + + P+ + +K + ++ L V + Sbjct: 63 NPLIIHIYDKKQLEELVEGDIEQNSYVMDVFWPGPVTFIFRKKA-NVPKEVTGGLETVAI 121 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P++P+ + L+ P+ S NLSGKP E +ADL G D + + + Sbjct: 122 RMPSHPVAQVFLRLSGTPVAAPSANLSGKPSPTRAEHVIADLYGSVDVIIDGG-ETPLGL 180 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPV 394 + ++V S + R P + K VP + Sbjct: 181 ESTIVDLSRDYPVLLR---PGPATIEEIKKIVPNL 212 >UniRef50_C1TLJ1 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Synergistaceae RepID=C1TLJ1_9BACT Length = 322 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 10/193 (5%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + + A++ LK G +V + L D + AV+ + K RP P Sbjct: 5 IKVDRWNPDREVIDRAVSILKSGGLVGFPTETVYGLGADGLDGKAVSGIFEAKGRPSDNP 64 Query: 250 LAVMLPV------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 L + + + D A ++ P+ LV +P + ++ L+ VGV +P Sbjct: 65 LILHVGDPESVRKIAKVDDRADMIMKNLWPGPLTLVLP-ALPIVPPEVTAGLDTVGVRMP 123 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 ++P+ LLQ P+ S N SG+P DL D + ++ + Sbjct: 124 SHPVALALLQACPFPVAAPSANTSGRPSPTDAVTVARDLDDRVDLIIDGG-ATEVGLEST 182 Query: 363 VVRESGEMLRRSR 375 V+ +GE+ R Sbjct: 183 VLDVTGEVPVLLR 195 >UniRef50_UPI0000E87FE5 Putative translation factor n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FE5 Length = 324 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 17/192 (8%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK-PLAVML 254 A + A+ LK GK+V + + LA DA +++A+ + K RP PL + L Sbjct: 7 KATDSDCINQAVTLLKDGKLVGLPTETVYGLAADATHTSAIQEIFRVKKRPPNHPLILHL 66 Query: 255 PVADGLPD-----------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P L A+Q + P + VL+ K P + + I N++ + +P Sbjct: 67 PDLSDLSQWAINIPDITYALAKQFM--PGSLSVLLHKN--PSVSNAITGGSNKICIRIPH 122 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 + +++ L P+V S N+ G+ S E + DL G D + + ++ ++ Sbjct: 123 HETTLKIIERLGSPIVAPSANIFGRISPTSAEHVMQDLFGEIDAVVDGG-ECRVGIESTI 181 Query: 364 VRESGEMLRRSR 375 V + + R Sbjct: 182 VDLTTPIPTLLR 193 >UniRef50_C5CGY8 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGY8_KOSOT Length = 342 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 14/196 (7%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLP-- 255 + + A L+ G++VA + L +A ++ A + + K RP PL V + Sbjct: 14 DKGIILRAARYLQKGELVAFPTETVYGLGANALDAKAASKIFEAKGRPQDNPLIVHVSSI 73 Query: 256 ------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 V D L D + P+ ++ +K + D + L VG+ P++P+ Sbjct: 74 EMAQELVLDDLNDYKWLVELLWPGPVTIIFRKSR-RIPDIVTAGLPNVGIRFPSHPVAQK 132 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 L++ P+ S NLSG+P + D+ G L+ + + ++ ++V S Sbjct: 133 LIEIAGLPIAAPSANLSGRPSPTDEFHVIEDMDGRIACMLLAGKTLF-GLESTIVDLSRG 191 Query: 370 MLRRSRGYVPDALALP 385 R P +++ Sbjct: 192 KPTLLR---PGPISVE 204 >UniRef50_A7NRM0 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Bacteria RepID=A7NRM0_ROSCS Length = 355 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 11/191 (5%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 A + A A ++ G +VA + L +A + AV + K RP P+ Sbjct: 13 DPSAPDPRIIAEAAAVIESGGLVAFPTETVYGLGANALDERAVTRIFRAKGRPATDPIIA 72 Query: 253 MLPV-------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + A +P AR L P+ LV + P + +++ V V +PA+ Sbjct: 73 HIADLRQLDMLARDIPPVARVLAQRFWPGPLTLVVWRR-PIVPANLSAGRATVAVRMPAH 131 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 P+ L+ P+ S N +P + L DL G D L + ++ SVV Sbjct: 132 PVALALIAAAGVPIAAPSANRFSRPSPTTAVHVLDDLAGCIDLVLDGG-PTLVGIESSVV 190 Query: 365 RESGEMLRRSR 375 + + R R Sbjct: 191 DLTTDPPRLLR 201 >UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostridium RepID=C9XS85_CLODC Length = 353 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 13/183 (7%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML------- 254 ++ L+ GK V + L +A + NAV + K RP PL V + Sbjct: 25 IKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKEEVY 84 Query: 255 PVADGLPDAARQLLTT-PAAPIVL-VDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ 312 +A + D A+ ++ PI + ++KK + + + L+ V + +P+N + +++ Sbjct: 85 DLAKDISDKAKLVIEKLWPGPITIILNKKDI--IPYKTSGGLDTVAIRMPSNVIARAIIK 142 Query: 313 ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLR 372 E P+ S N+SG+P + ++ G DG ++ D ++ +V+ + E Sbjct: 143 EAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGG-DSNFGLESTVLDLTEETPM 201 Query: 373 RSR 375 R Sbjct: 202 ILR 204 >UniRef50_C3NRT1 Sua5 YciO YrdC YwlC family protein n=35 Tax=Gammaproteobacteria RepID=C3NRT1_VIBCJ Length = 329 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 11/182 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK-PLAVMLPVADGLP 261 ++ A LK G++VAI + LA DA AV + + K RPA PL V L A+ L Sbjct: 22 IECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSAEQLS 81 Query: 262 D-------AARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 + A QL P+ L+ K ++ + L VG+ +PA+P+ +L+ Sbjct: 82 EWATDIAPEAYQLAEAFWPGPLTLLLPK-AKQVSPVVTGGLESVGIRVPAHPVLLDILKT 140 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRR 373 + + S N K S +Q L L G L + ++ ++V + + R Sbjct: 141 HRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGG-ECQHGLESTIVDLTSKPFRV 199 Query: 374 SR 375 R Sbjct: 200 LR 201 >UniRef50_A8RQH7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQH7_9CLOT Length = 412 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 11/196 (5%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + ++ L+ A + L+ G +VA + L +A + +A + A K RP Sbjct: 5 RIIIEDRNHIKDEELKEAASILRSGGLVAFPTETVYGLGGNALDEDAARKIYAAKGRPSD 64 Query: 248 KPLAVML-------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL + P+ +P+A R+L+ P+ ++ K ++ L+ V + Sbjct: 65 NPLIAHVSCVEEVAPLVKEIPEAGRKLMEAFWPGPLTMIFPKSE-KVPYGTTGGLDTVAI 123 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P +P+ + L+ P+ S N SG+P + + D+ G + + + + Sbjct: 124 RMPDDPVANRLIALAGVPVAAPSANTSGRPSPTTADHVWQDMNGRIEMIIDGG-PVGIGV 182 Query: 360 DDSVVRESGEMLRRSR 375 + ++V S + R Sbjct: 183 ESTIVDVSSAVPSVLR 198 >UniRef50_D0BMJ6 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Granulicatella RepID=D0BMJ6_9LACT Length = 341 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 10/176 (5%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 L A LK G++VA + L A + AV + K RP PL V + D + Sbjct: 11 LDQAATLLKQGEVVAFPTETVYGLGAIATSQEAVLKVFEAKGRPSDNPLIVHVHSVDHVM 70 Query: 262 DAARQLLTT--------PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 D + + P+ ++ K ++ L V +P + L L+++ Sbjct: 71 DTVEEFPESAKLLAKHFWPGPLTMILKAKPGIYAPALSAGLPTVSFRMPNHELTLSLIEQ 130 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 + PLV S N S KP E + D+ G G + D ++ +V+ + E Sbjct: 131 VGIPLVGPSANQSTKPSPTRVEHVVEDMDGRIAGIVDGG-DTSVGVESTVIDLTNE 185 >UniRef50_A6P084 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P084_9BACE Length = 341 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVAD--- 258 +Q A LK G ++ I + L + AVA + A K RP PL + +P AD Sbjct: 11 IQEAAEILKRGGLLGIPTETVYGLGASGLDPEAVAHIFAAKGRPQDNPLILHVPSADWLE 70 Query: 259 ----GLPDAARQLLTT--PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQ 312 +PDAA L P +++ +K P + D + L+ VG+ P + + ++ Sbjct: 71 RYCEDIPDAAYALAERFWPGPMTMILRRK--PIVPDAVTAGLDTVGMRCPDHGVTRAIIA 128 Query: 313 ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLR 372 P+ SGN SG+P S L D+ G DG + ++ +++ + R Sbjct: 129 AAGVPVAAPSGNTSGRPSPTSAADMLEDMDGKIDGIVDGG-PCTVGVESTIIDLTLTPPR 187 Query: 373 RSR 375 R Sbjct: 188 LLR 190 >UniRef50_C4FU51 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU51_9FIRM Length = 340 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 13/202 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGL- 260 L A A L+ G++VA + L A AVA + K RP PL V + A + Sbjct: 11 LDEAAALLRRGELVAFPTETVYGLGAIATKEQAVAKVFQAKGRPSDNPLIVHVKDAQQVL 70 Query: 261 ------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P+ A++L+ P+ ++ ++ + V +P L+ Sbjct: 71 DYAAEVPELAKELMERFWPGPLTIILPVKPGVFPANVNNGQDTVAFRMPNQQSALRLIDL 130 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ-RMDDSVVRESGEMLR 372 + PLV S NLSGKP S + + D G+ G + + D Q ++ +VVR + L Sbjct: 131 VGTPLVGPSANLSGKPSPTSVDHVMQDFDGLIAGVVAGDTDQAQIGVESTVVRPMADRLV 190 Query: 373 RSRGYVPDALALPPGFKNVPPV 394 R P A+ + P V Sbjct: 191 ILR---PGAITQSMLAQVCPNV 209 >UniRef50_Q3AQA5 Translation factor SUA5 n=12 Tax=Chlorobiaceae RepID=Q3AQA5_CHLCH Length = 324 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 15/187 (8%) Query: 204 QAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML-------P 255 A A L GKIVA + L +S A+ + K RP PL + + Sbjct: 18 AEAAALLNGGKIVAFPTETVYGLGATINHSEALKQIFVAKGRPSDNPLILHIAHPDNIGK 77 Query: 256 VADGLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 VA +P A + + P+ LV K P++ + + L VGV PA+P+ LL + Sbjct: 78 VAATVPRYAERFIEKFFPGPLTLVLPKQ-PQVPELVTAGLQSVGVRCPAHPMAQALLALV 136 Query: 315 QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR--DIVQRMDDSVVRESGEMLR 372 P+ S N SGKP A S E DL G DG L R ++ ++V + Sbjct: 137 NSPVAAPSANRSGKPSATSWETVYDDLNGRIDGLL---RSAPCTIGLESTIVDCTANTPL 193 Query: 373 RSRGYVP 379 R Sbjct: 194 LLRAGAI 200 >UniRef50_C0AQL5 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AQL5_9ENTR Length = 158 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 7/149 (4%) Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM-------PRVDNQLDLAT 649 FFDAV+A+LG AP +S+EGEAAC L+ A +CH + P ++ LDL Sbjct: 4 FFDAVSASLGLAPKEISWEGEAACYLQTAALACHKEKQSEIIERYGHLMPVKNSVLDLGV 63 Query: 650 FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 FW QW + + V+++AW FH LA+ + + A I T+V +GGV++N LL+ Sbjct: 64 FWSQWESIKLNVSEKAWLFHYLLAESLGNIALQYADEHQIDTVVLTGGVLNNTLLKHMFK 123 Query: 710 HYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 L + +L P LP GDGG++LGQ +IA Sbjct: 124 KKLNNKKVLTPMMLPVGDGGIALGQALIA 152 >UniRef50_O29477 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O29477_ARCFU Length = 309 Score = 134 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 12/185 (6%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV----- 252 ++ A+A L+ G IVA + + CDA N A+ L K R KP V Sbjct: 8 SREGIRKAVAVLRAGGIVAFPTETVYGMGCDATNEEALRRLYEIKGRSLNKPFIVGVWSR 67 Query: 253 -MLPVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + + + A +L+ P+ LV K + ++P ++ V +PA+ + L Sbjct: 68 DYVGKIAEVDERAEKLMEAFFPGPLTLVLKSK-GVMPSLLSPK-GKIAVRMPAHEVPLQL 125 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 ++ L+ P+V+ S NLSG+P + E + +L D + + ++ ++V + Sbjct: 126 MEMLRKPIVVPSANLSGRPSLMRWEHVVEELGSRIDAVVKG--ECKVGVESTIVDLTETP 183 Query: 371 LRRSR 375 + R Sbjct: 184 AKVLR 188 >UniRef50_B7IFU2 Universally conserved protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFU2_THEAB Length = 337 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 16/197 (8%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR-PAKPLAVMLPVA 257 E L +K G +VA + L A AV + K R PL V + Sbjct: 14 NEKDLIEVCNVIKSGGLVAFPTETVYGLGASAFEEKAVDNIFKVKGRAKDNPLIVHVDRF 73 Query: 258 DGLPDAARQLLTTPAA-------PIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + L + A A P+ V K+ + L ++ L VGV +PA+P+ L Sbjct: 74 EKLLEIAEVAEKYFEAINKLTPGPVTFVLKQKI-NLPKNVTAGLKTVGVRIPAHPVARKL 132 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI-HNRDIVQRMDDSVVRESGE 369 + P+ S NLSGKP ++ + DL G D + N + ++ +++ + E Sbjct: 133 CK-CAGPIAAPSANLSGKPSPTDSQAVIEDLFGKIDFIIDAGNSE--FGLESTIIDLTSE 189 Query: 370 MLRRSRGYVPDALALPP 386 + R P + + Sbjct: 190 IPIVLR---PGPITIEQ 203 >UniRef50_C9RL80 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL80_FIBSS Length = 331 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 83/216 (38%), Gaps = 24/216 (11%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVADGLP 261 + A LK G++VAI + LA +A A+A + A K RP PL V + L Sbjct: 21 VSEAARLLKEGEVVAIPTETVYGLAGNAFEPKALAKIFAAKERPTFDPLIVHIADIAQLT 80 Query: 262 DAARQLLTT--------PAAP--IVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 D A+ + + P I+L K +P+LC L V V P++P+ ++ Sbjct: 81 DIAKDIPDSAYRLAEAYWPGPMTIILPKKDCIPDLC---TSALPSVAVRFPSHPIAQAII 137 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE-M 370 +E PL S NL + E A L G + ++ S++ GE Sbjct: 138 KESGLPLAAPSANLFKHVSPTTAEHVAAQLADRIAGIVDGG-PCSVGVESSIISLVGEPT 196 Query: 371 LRRSRGYVPDALALPPGF--------KNVPPVLCLG 398 + R P+ G K P+L G Sbjct: 197 VMRPGAITPEMFKAILGEVKIKESTSKPGQPMLAPG 232 >UniRef50_A7E7K5 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E7K5_SCLS1 Length = 459 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 77/220 (35%), Gaps = 34/220 (15%) Query: 201 AALQAAIAQLKMGKI-VAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVAD 258 + A LK I VA + L DA S+AV + K RP PL + + Sbjct: 45 QPIAEAAEYLKTKSIPVAFPTETVYGLGADATRSDAVKGIYKTKGRPSDNPLIIHVCDLT 104 Query: 259 GLPDAARQLLTT------------------------PAAPIVLVDKKYVPE-LCDDIAPD 293 L R LL++ P+ ++ P L ++ Sbjct: 105 ML----RSLLSSTENQSSGADFPEIPEIYKPLIKCFWPGPLTILLPNPSPSKLAPEVTAG 160 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L G +P++PL L++ PL S N S KP + E DL G + L Sbjct: 161 LQTFGARMPSSPLALSLIRLAGVPLAAPSANASTKPSCTTAEHVYHDLNGRIEIILDGG- 219 Query: 354 DIVQRMDDSVVR--ESGEMLRRSRGYVPDALALPPGFKNV 391 ++ +VV ++ R G D + G++ V Sbjct: 220 ACQVGVESTVVDGMCDPPVVLRPGGVSIDEIRGCHGWERV 259 >UniRef50_D2RP50 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RP50_ACIFE Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 10/162 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 ++ + EA L A L+ G++VA + L D N A + A K RP Sbjct: 4 QYWKLKDDEPLEAQLAPAARLLQQGEVVAFPTETVYGLGADGLNGEACRKIFAAKGRPAD 63 Query: 248 KPLAVML-------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL + + P+ GL A +L+ P+ L+ K + + + V V Sbjct: 64 NPLILHISEKEEILPLTSGLSPMAEKLMEAFWPGPMTLIVPK-SDRIPEVVTAGQETVAV 122 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADL 341 P+NP+ L++ PL S N SGKP + + L D+ Sbjct: 123 RFPSNPVARALIRLTGRPLAAPSANKSGKPSPTNAQDVLQDM 164 >UniRef50_B1CAL3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAL3_9FIRM Length = 340 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 13/185 (7%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADG 259 A + + G V + L +A + AV + K+RP PL V + D Sbjct: 16 EIFSDAASVINAGGTVVFPTETVYGLGANAYDDEAVKKIFKAKNRPSDNPLIVHISDLDM 75 Query: 260 -------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 + D AR+L++ P+ L+ KK ++ + ++ L+ VG+ +P++ + + Sbjct: 76 IDDLVTCISDDARKLMSKFFPGPLTLIMKK-SSKVPNSVSNGLDTVGIRMPSDKEANGFI 134 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL-IHNRDIVQRMDDSVVRESGEM 370 + P+ S N+S +P + + + +L G D L N I ++ +V+ S + Sbjct: 135 KACGVPIAAPSANISKRPSITNKKYLVEELSGKVDMILCSKNSSI--GLESTVLDVSSDK 192 Query: 371 LRRSR 375 ++ R Sbjct: 193 VKLLR 197 >UniRef50_A4SZW0 Translation factor SUA5 n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZW0_POLSQ Length = 362 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 22/200 (11%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK-PLAVML------- 254 + A+ L+ G +VA + L DA+N A+ + + K RP+ PL V L Sbjct: 14 INEAVQSLRDGGLVAFPTETVYGLGADAKNPEAIKKIFSTKGRPSNHPLIVHLAAPDRFD 73 Query: 255 -----------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 P L + A +L+ P+ LV KK L +++ + V + P Sbjct: 74 QAQVDWVPVLAPWVRDLSEDALKLINAFWPGPLTLVFKKDKSVL-NELTGGQDTVAIRAP 132 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 A+P+ LL++ + +V S N GK S + +G+ D ++ D ++ + Sbjct: 133 AHPIAQELLRKFKGGVVAPSANRFGKVSPTSAADVRHEFEGVLDLMVLDGGDCEVGIEST 192 Query: 363 VVR-ESGEMLRRSRGYVPDA 381 ++ SG+ R V Sbjct: 193 IIDLSSGDRAILLRPGVITP 212 >UniRef50_A1R0F9 Sua5/YciO/YrdC/YwlC family protein n=24 Tax=Borrelia RepID=A1R0F9_BORT9 Length = 336 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 14/173 (8%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 ++ A ++ G++V + + +A N +A+ + K RP PL V + + + Sbjct: 14 IKKAAKLIRAGELVVFPTETVYGIGANAYNDDAIRMIFLVKRRPITNPLIVHVESIEKIK 73 Query: 262 DAARQLLTTPAAPIVLVDK----------KYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 + + P + ++L+ K K ++ + I+ L+ + V +P+ P+ L+ Sbjct: 74 ELVEYI---PKSALILMQKFTPGPLTFILKNAGKISNFISGGLDSIAVRIPSEPVALKLI 130 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 + P+ S NLS +P A + E A+ +L G+ G + N + ++ +V+ Sbjct: 131 KMSGVPIAAPSANLSRRPSATNFEMAIRELDGLVKGIIKKNEESKIGIESTVI 183 >UniRef50_A8MAU3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=cellular organisms RepID=A8MAU3_CALMQ Length = 358 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 88/232 (37%), Gaps = 20/232 (8%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + A ++ A + G +VA + L N +A+ + A K+RP Sbjct: 9 RLIKVDAVNPDMALIRIAADVILKGGLVAFPTETVYGLGASTYNDDAIRRIYAVKNRPMD 68 Query: 248 KPLAVML-------PVADGLP-DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P V + VA+ +P + +L P+ ++ +K + + + L+ V V Sbjct: 69 NPSIVHISSFNQLYEVAEDIPSELEERLKVAWPGPLTVILRK-SSRISEVASCGLSTVAV 127 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +PA+P+ L++E P+ S N+SGKP E + DL G D + + + Sbjct: 128 RMPAHPVALALIRES-TPISAPSANISGKPSPTRAEHVIKDLWGKIDLIIDGG-ETFFGV 185 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPV----LCLG-ADLKNTFC 406 + +++ + + R P + + + LG K Sbjct: 186 ESTIIDYTKKPPVLYR---PGPFTVEELRRIFGEIKVPEQALGLGQFKEALA 234 >UniRef50_C2KZL7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Firmicutes RepID=C2KZL7_9FIRM Length = 367 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 11/189 (5%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 + + A LK G +VA + L + + A + A K RP PL + + Sbjct: 4 KIFGKEGISEAAEILKGGGLVAFPTETVYGLGGNGLDKEAAKKIYAAKGRPSDNPLILHV 63 Query: 255 PVAD-------GLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 + LP+ A++L+ P+ LV K + + L V + P N L Sbjct: 64 SSIEEVYPLVKALPEKAKKLMEAFWPGPLTLVLPK-SDLVPKESTGGLETVALRSPENAL 122 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 L++ P+ S NLSG+P DL G +G L + + ++ ++V Sbjct: 123 TLSLIRACGFPIAGPSANLSGRPSPTEASHVFEDLGGRIEGILE-DGAVGIGVESTIVDL 181 Query: 367 SGEMLRRSR 375 S R Sbjct: 182 SENCPTLLR 190 >UniRef50_B8D397 Putative translation factor n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D397_DESK1 Length = 359 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 14/223 (6%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + +E +QAA L G IVA + L +AV + K RP Sbjct: 5 TLILRTDPLNPSRELLIQAARILLNKG-IVAFPTETVYGLGAVIYYEDAVEKIFKAKMRP 63 Query: 247 -AKPLAVMLPVAD-------GLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEV 297 PL + + D +P+ A L+ P+ L+ + P + + L+ + Sbjct: 64 PDNPLIIHISTLDMLEEVALNIPEDAYSLINRFWPGPLTLILPR-NPRVPKIVTGGLDTI 122 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 V +P +P L+ + P+ S NLSG+P ++ E + DL G D + + Sbjct: 123 AVRMPGHPTALELINVVGYPIAAPSANLSGRPSPVTAEHVIRDLMGRIDAIIDAG-ETFF 181 Query: 358 RMDDSVVR--ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLG 398 ++ +VV E L R Y + + G K P G Sbjct: 182 GVESTVVNILEDPPTLLRPGAYPVEEIEKVLGRKIAIPDFARG 224 >UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3T1_9PLAN Length = 325 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPV 256 E +QAA +++G++VA + L +A N AVA + A K RP PL V + Sbjct: 4 EISQNIQAAANLIRLGELVAFATETVYGLGANALNPEAVAQIFAVKQRPHFDPLIVHIAS 63 Query: 257 ADGLPD--------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 L + A + T P+ LV K + D + L+ V + +PA+P+ Sbjct: 64 TGQLDELTTEFSSTAEKLASTFWPGPLTLVLPKKK-VVPDLVTSGLDSVAIRIPAHPVAR 122 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 LL+ Q P+ S N G+ L L ++ +V++ G Sbjct: 123 KLLEITQLPIAAPSANKFGRLSPTRAVDVAEQLGDEIKLILDGG-PCTVGVESTVIQCLG 181 Query: 369 EMLRRSR 375 + R Sbjct: 182 DQPVLLR 188 >UniRef50_B0EKC6 Sua5, putative n=3 Tax=Entamoeba RepID=B0EKC6_ENTDI Length = 357 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 76/207 (36%), Gaps = 25/207 (12%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 + A ++ G +V + L D NA+ + K RP PL Sbjct: 23 DRDNVDSKLITPAAKIIQQGGLVCFPTETVYGLGADVFQPNAINQIFKVKGRPNDNPLIC 82 Query: 253 MLPVADGLPDAARQLLTT---------PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 + + L A + P A ++ + + +++ LN VGV +P+ Sbjct: 83 HISDIEMLNKLAAHVSEDAHKLIKRFWPGALTIIFPRNET--VPNEVTAGLNTVGVRMPS 140 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN-RDIVQRMDDS 362 +P+ + +++ + P+ S NLS KP + DL G + + DI ++ + Sbjct: 141 HPIAYEFIKQCKTPIAAPSANLSTKPSPTIGRHCIDDLNGRIEMIIDGGACDI--GVEST 198 Query: 363 V----------VRESGEMLRRSRGYVP 379 V +R G L R +P Sbjct: 199 VLLLGNEHPTILRPGGVTLEMLREVIP 225 >UniRef50_UPI00016C0B40 hypothetical protein Epulo_03232 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B40 Length = 334 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 16/209 (7%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 + L+ AI LK G +V + L +A + NAV + K RP PL V + Sbjct: 7 SKTDNLELAINILKNGGLVVSPTETVYGLCANALDENAVENIFKAKGRPADNPLIVHIAS 66 Query: 257 ADGLPDA-------ARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 L A++L+ P+ L+ K + + +L V + P N + Sbjct: 67 LAMLDQLVAEISANAQKLIDAFWPGPLTLIFKSQN-IIPNKTRANLQTVAIRFPENKIII 125 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI-HNRDIVQRMDDSVVRES 367 L+++ + PL S N SGKP + ++ + DL G D + N I ++ +VV S Sbjct: 126 ELIKKSKLPLAAPSANTSGKPSPTNIDRVIEDLFGKVDCIIDGGNCKI--GLESTVVDVS 183 Query: 368 GEMLRRSRGYVPDALALPPGFKNVPPVLC 396 G+ R R P + K VP V Sbjct: 184 GDNARILR---PGFITAAMLEKIVPSVSA 209 >UniRef50_B2A977 Predicted CDS Pa_1_8670 n=1 Tax=Podospora anserina RepID=B2A977_PODAN Length = 413 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 13/188 (6%) Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV------MLPVADGLPDAARQLL 268 VA + L DA +S AV + K RP PL V ML +P+ +L+ Sbjct: 69 VAFPTETVYGLGADATSSTAVKGIYTAKGRPSDNPLIVHVSDLSMLSTLSTIPEIYHELI 128 Query: 269 TT-PAAPIVLVDKKYVPE--LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNL 325 + P+ ++ L ++ L G +P +PL L+Q + PL S N Sbjct: 129 SKFWPGPLTILLPVPTSGQLLAPEVTAGLTTFGARMPDSPLARALIQLVGKPLAAPSANA 188 Query: 326 SGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR--ESGEMLRRSRGYVPDALA 383 S +P L DL+G + L D ++ +VV + ++ R G + + Sbjct: 189 STRPSPTKAVHVLEDLEGKIELILDGG-DCAVGVESTVVDGLCNPPVVLRPGGVGIEEIR 247 Query: 384 LPPGFKNV 391 G++ V Sbjct: 248 QVKGWEGV 255 >UniRef50_D1VRM2 Protein Sua5 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VRM2_9FIRM Length = 350 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 11/194 (5%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 +S + + + L+ K G +V + L + + AV + K RP P Sbjct: 8 LSEKDIDKDKKELKKITETFKEGGLVVFPTETVYGLGANGLDKEAVKKIYEAKGRPNDNP 67 Query: 250 LAVML-------PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 + + + +P A++ + P+ ++ KK + ++ L+ V + + Sbjct: 68 SILHIAKTSQLDELVSEIPKIAKKCINNFWPGPLTIIFKK-SDIVPMEVTGGLDTVAIRM 126 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P+N + +L+ + P+ S N+SG+P + DL G D + + IV ++ Sbjct: 127 PSNKIAAKILKNVNLPIAAPSANISGRPSPTKASHVIEDLMGRVDIIVDGGKSIV-GIES 185 Query: 362 SVVRESGEMLRRSR 375 +V+ + + R Sbjct: 186 TVLDVTTDPPMILR 199 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacter... 1065 0.0 UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 ... 1018 0.0 UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 T... 1015 0.0 UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus... 1009 0.0 UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 T... 1007 0.0 UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 T... 1000 0.0 UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 T... 999 0.0 UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 T... 996 0.0 UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 T... 993 0.0 UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 T... 992 0.0 UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 T... 991 0.0 UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 ... 976 0.0 UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 969 0.0 UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 T... 969 0.0 UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophu... 969 0.0 UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 T... 966 0.0 UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 ... 966 0.0 UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 T... 962 0.0 UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 T... 958 0.0 UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 T... 955 0.0 UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 T... 951 0.0 UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 T... 949 0.0 UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis ... 947 0.0 UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 T... 946 0.0 UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 T... 944 0.0 UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protei... 943 0.0 UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carb... 942 0.0 UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 ... 939 0.0 UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 T... 937 0.0 UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=... 933 0.0 UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulf... 932 0.0 UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, puta... 931 0.0 UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Ta... 931 0.0 UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 T... 929 0.0 UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 T... 925 0.0 UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 T... 924 0.0 UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogen... 924 0.0 UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clo... 923 0.0 UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 T... 920 0.0 UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 T... 919 0.0 UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 T... 919 0.0 UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 T... 919 0.0 UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Stre... 918 0.0 UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 T... 918 0.0 UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 T... 917 0.0 UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shew... 915 0.0 UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=... 915 0.0 UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory prot... 915 0.0 UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacterac... 911 0.0 UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legi... 908 0.0 UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteri... 908 0.0 UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 T... 907 0.0 UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostri... 907 0.0 UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 T... 905 0.0 UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 T... 904 0.0 UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 T... 904 0.0 UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 T... 903 0.0 UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 T... 901 0.0 UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protei... 900 0.0 UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Eury... 897 0.0 UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia i... 897 0.0 UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 ... 895 0.0 UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=... 893 0.0 UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 T... 892 0.0 UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=... 892 0.0 UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 T... 892 0.0 UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 T... 890 0.0 UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 T... 889 0.0 UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protei... 889 0.0 UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collins... 888 0.0 UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Phot... 888 0.0 UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Meth... 887 0.0 UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 T... 887 0.0 UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 T... 887 0.0 UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 T... 887 0.0 UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Prot... 886 0.0 UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM 884 0.0 UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 T... 883 0.0 UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein Hyp... 883 0.0 UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 T... 881 0.0 UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 T... 881 0.0 UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobac... 881 0.0 UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legi... 880 0.0 UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 T... 880 0.0 UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 T... 879 0.0 UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH 878 0.0 UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncu... 876 0.0 UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bact... 876 0.0 UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 T... 875 0.0 UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 T... 875 0.0 UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitr... 874 0.0 UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 T... 873 0.0 UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 T... 873 0.0 UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2... 873 0.0 UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 T... 872 0.0 UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridi... 868 0.0 UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemm... 867 0.0 UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 ... 867 0.0 UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroida... 867 0.0 UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein Hyp... 866 0.0 UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosa... 866 0.0 UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 T... 866 0.0 UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 T... 865 0.0 UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 T... 863 0.0 UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 T... 863 0.0 UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 T... 862 0.0 UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 T... 861 0.0 UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 T... 860 0.0 UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 T... 858 0.0 UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 T... 856 0.0 UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobac... 854 0.0 UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protei... 853 0.0 UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 T... 853 0.0 UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyr... 853 0.0 UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 T... 848 0.0 UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Fran... 847 0.0 UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 T... 847 0.0 UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Heli... 847 0.0 UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 T... 847 0.0 UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Ta... 846 0.0 UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 T... 846 0.0 UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria... 845 0.0 UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfo... 844 0.0 UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Nept... 843 0.0 UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 840 0.0 UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST 840 0.0 UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 T... 840 0.0 UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 T... 839 0.0 UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales R... 837 0.0 UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sora... 837 0.0 UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobac... 834 0.0 UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psyc... 834 0.0 UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 T... 834 0.0 UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=... 832 0.0 UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 T... 832 0.0 UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein Hyp... 831 0.0 UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein Hyp... 828 0.0 UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomy... 820 0.0 UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vi... 819 0.0 UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 T... 817 0.0 UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 T... 816 0.0 UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 T... 809 0.0 UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota ... 807 0.0 UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 T... 807 0.0 UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 T... 804 0.0 UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 T... 800 0.0 UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax... 799 0.0 UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 T... 795 0.0 UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncu... 792 0.0 UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Phot... 790 0.0 UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Acti... 789 0.0 UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 T... 788 0.0 UniRef50_O28905 Hydrogenase expression/formation regulatory prot... 783 0.0 UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 T... 776 0.0 UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 T... 775 0.0 UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=... 774 0.0 UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 T... 773 0.0 UniRef50_UPI000197837F transcriptional regulatory protein HypF n... 772 0.0 UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea R... 772 0.0 UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 T... 763 0.0 UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alte... 762 0.0 UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 T... 750 0.0 UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax... 747 0.0 UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 T... 745 0.0 UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter ... 735 0.0 UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n... 723 0.0 UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phyma... 721 0.0 UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alph... 713 0.0 UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 T... 706 0.0 UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 T... 698 0.0 UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax... 535 e-150 UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collins... 500 e-140 UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 T... 488 e-136 UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 T... 477 e-133 UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 T... 416 e-114 UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mari... 412 e-113 UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=... 368 e-100 UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Bur... 359 2e-97 UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Mag... 331 8e-89 UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thau... 321 4e-86 UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=... 313 1e-83 UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomy... 298 7e-79 UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synecho... 268 5e-70 UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina ... 243 2e-62 UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular ... 231 7e-59 UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Br... 231 8e-59 UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacte... 227 1e-57 UniRef50_A7VH00 Putative uncharacterized protein n=1 Tax=Clostri... 225 6e-57 UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6... 224 1e-56 UniRef50_A4XJN5 Translation factor SUA5 n=2 Tax=Clostridia RepID... 222 4e-56 UniRef50_C7GYT3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Eubac... 222 4e-56 UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firm... 221 1e-55 UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium ... 218 5e-55 UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Therm... 218 5e-55 UniRef50_C9KMA3 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Veill... 218 8e-55 UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clost... 217 9e-55 UniRef50_A8RQH7 Putative uncharacterized protein n=1 Tax=Clostri... 217 9e-55 UniRef50_B3DXI5 Putative translation factor SUA5 n=1 Tax=Methyla... 217 1e-54 UniRef50_A7HKY2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fervi... 215 4e-54 UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archa... 214 8e-54 UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paeni... 214 9e-54 UniRef50_A1S178 Translation factor SUA5 n=2 Tax=Thermoprotei Rep... 214 9e-54 UniRef50_B8E005 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Dicty... 214 1e-53 UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cell... 214 1e-53 UniRef50_C1TLJ1 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Syner... 214 2e-53 UniRef50_C4KYV0 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacil... 212 3e-53 UniRef50_Q0SQY3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=Clos... 212 5e-53 UniRef50_Q03EK3 Translation factor SUA5 n=78 Tax=Lactobacillales... 212 6e-53 UniRef50_C2KZL7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Firmi... 211 6e-53 UniRef50_B8D397 Putative translation factor n=1 Tax=Desulfurococ... 211 9e-53 UniRef50_A9BIX5 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Petro... 211 1e-52 UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacte... 210 2e-52 UniRef50_A6UX18 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Eurya... 210 2e-52 UniRef50_A7NRM0 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Bacte... 209 3e-52 UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halot... 209 4e-52 UniRef50_C8WUG5 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Alicy... 208 6e-52 UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinace... 208 6e-52 UniRef50_B2A3I0 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Natra... 208 6e-52 UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales... 208 6e-52 UniRef50_A7E7K5 Putative uncharacterized protein n=1 Tax=Sclerot... 208 6e-52 UniRef50_A8MAU3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=cell... 208 7e-52 UniRef50_D1VRM2 Protein Sua5 n=1 Tax=Peptoniphilus lacrimalis 31... 208 7e-52 UniRef50_D0BMJ6 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Granu... 207 1e-51 UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC ... 207 2e-51 UniRef50_C9RAD4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Ammon... 206 2e-51 UniRef50_C4FU51 Putative uncharacterized protein n=1 Tax=Catonel... 206 4e-51 UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostri... 206 4e-51 UniRef50_Q2YBF7 Translation factor SUA5 n=8 Tax=Bacteria RepID=Q... 205 4e-51 UniRef50_C5CGY8 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Kosmo... 205 7e-51 UniRef50_UPI00016C0B40 hypothetical protein Epulo_03232 n=1 Tax=... 204 8e-51 UniRef50_B0EKC6 Sua5, putative n=3 Tax=Entamoeba RepID=B0EKC6_ENTDI 204 8e-51 UniRef50_A6DT40 Sua5 related protein n=1 Tax=Lentisphaera araneo... 204 9e-51 UniRef50_C4GC44 Putative uncharacterized protein n=1 Tax=Shuttle... 204 1e-50 UniRef50_C1ADQ5 Putative uncharacterized protein n=1 Tax=Gemmati... 203 2e-50 UniRef50_C4V460 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Selen... 202 3e-50 UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3... 202 3e-50 UniRef50_B8PCG4 Predicted protein n=3 Tax=Agaricomycetes RepID=B... 202 4e-50 UniRef50_Q9HLC7 Sua5 related protein n=4 Tax=Thermoplasmatales R... 202 4e-50 UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Rumin... 202 5e-50 UniRef50_B2A977 Predicted CDS Pa_1_8670 n=1 Tax=Podospora anseri... 202 6e-50 UniRef50_C0NCN9 Translation initiation protein Sua5 n=3 Tax=Ajel... 202 6e-50 UniRef50_A4WKJ1 Translation factor SUA5 n=5 Tax=Thermoprotei Rep... 201 7e-50 UniRef50_C9LKV0 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Diali... 201 8e-50 UniRef50_D1BN20 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Veill... 201 9e-50 UniRef50_C4KBK6 Sua5/YciO/YrdC/YwlC family protein n=13 Tax=Beta... 201 1e-49 UniRef50_D1B5Y4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Therm... 200 2e-49 UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macroco... 200 2e-49 UniRef50_D2R349 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Pirel... 199 3e-49 UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum ... 199 4e-49 UniRef50_B5Y9H3 Universally conserved protein n=1 Tax=Coprotherm... 199 4e-49 Sequences not found previously or not previously below threshold: >UniRef50_P30131 Carbamoyltransferase hypF n=120 Tax=Enterobacteriaceae RepID=HYPF_ECOLI Length = 750 Score = 1065 bits (2754), Expect = 0.0, Method: Composition-based stats. Identities = 750/750 (100%), Positives = 750/750 (100%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ Sbjct: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQ 60 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG Sbjct: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA Sbjct: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR Sbjct: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 Query: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM Sbjct: 241 ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD Sbjct: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 Query: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG Sbjct: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA Sbjct: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA 480 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD Sbjct: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA Sbjct: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP Sbjct: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 Query: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP Sbjct: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP 720 Query: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG Sbjct: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQNG 750 >UniRef50_B7KHW8 (NiFe) hydrogenase maturation protein HypF n=15 Tax=Bacteria RepID=B7KHW8_CYAP7 Length = 780 Score = 1018 bits (2633), Expect = 0.0, Method: Composition-based stats. Identities = 299/777 (38%), Positives = 411/777 (52%), Gaps = 52/777 (6%) Query: 1 MAKNTSC-GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PET 56 MA NT+ + L IRG VQGVGFRPF+++LA +L+L G V N GV + + D +T Sbjct: 1 MADNTTKQRLSLIIRGAVQGVGFRPFIYRLATELDLVGWVNNSSVGVFIEVEGDKDQLDT 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEM 116 FL ++ PP ++I ++E + + F IR S G ++PD ATCP CL ++ Sbjct: 61 FLRRVQTENPPRSQIQAIETQWLDLT-GYKTFEIRHSVSGEKTAVVLPDLATCPDCLQDI 119 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P RRYRYPF NCT+CGPR+TII A+PYDR T M F LCP C EY +PLDRRFHA Sbjct: 120 FDPHNRRYRYPFTNCTNCGPRYTIIEALPYDRCHTTMKGFKLCPQCQAEYENPLDRRFHA 179 Query: 177 QPVACPECGPHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 QP ACP+CGPHLE E+AL A ++ GKIVAIKG+GGFHL DARN+ Sbjct: 180 QPNACPKCGPHLELWDQQGQILETHESALMATATAIREGKIVAIKGLGGFHLVVDARNTT 239 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDK-------- 280 AV LR RK RP KP AVM P + L + LL + PIVL+ Sbjct: 240 AVQELRKRKQRPDKPFAVMYPSLNLLKEHCLVTPTEEALLNSAECPIVLLKVLSSNFRSP 299 Query: 281 ----------KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPP 330 + E+ +AP+ +GVMLP PL HLLL EL P+V TSGN+S +P Sbjct: 300 LTPLYKGGNIRKEGEISPAVAPNNPYLGVMLPYTPLHHLLLAELGFPIVATSGNISDEPI 359 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALP-P 386 I +AL L IAD FLIHNR I + +DDS+VR G ++RR+RGY P + + Sbjct: 360 CIDELEALQKLNQIADLFLIHNRPIFRPVDDSIVRMMGGREMVMRRARGYAPFPIMIKSS 419 Query: 387 GFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTP 446 + P +L +G LKNT + R Q LSQH+GDL +++ + ++ +YDF P Sbjct: 420 PTHSQPSILAVGGHLKNTIAIARPPQIFLSQHIGDLETPAAFEYFQQVIASLRGLYDFNP 479 Query: 447 QYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 506 Q + DAHP Y+SSQ+A+E NLP V HH+AH +C+AEH V+ + DG G Sbjct: 480 QLIARDAHPDYISSQFAQEQNLPLIKVQHHYAHVLSCMAEHGLEP---PVLGVAWDGTGY 536 Query: 507 GENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE 566 GE+ +WGGE + V + + LPGG+ A K+P R+ L S Sbjct: 537 GEDETIWGGEFIYVTEDHYQRVAHFRPWRLPGGEKAVKEPRRSALGLLEA--INLPKTSI 594 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 + Q +L +++ +N+PL SS GR FD VA+ L S+EG+AA LE + Sbjct: 595 EKAFTPQELVLLQTILKKHLNSPLTSSVGRLFDGVASLLNIRHQ-ASFEGQAAMELEFII 653 Query: 627 ASCHGVTHPVTM--PRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMR 681 + + +D + + LN + Q + FH+ L + +++ Sbjct: 654 GETITDKYYDFLLSSSTPTVIDWSPIIKAILNDIFCNISLGQISVKFHNTLVKIILEIVK 713 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADF--TLLFPQSLPAGDGGLSLGQGV 736 +V +GG NR L R L + QS+P DGG++LGQ + Sbjct: 714 R----FPAHQIVLTGGCFQNRYLTERAIEQLQQHHYRPYWHQSIPPNDGGIALGQVI 766 >UniRef50_C7QNJ8 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Chroococcales RepID=C7QNJ8_CYAP0 Length = 780 Score = 1015 bits (2626), Expect = 0.0, Method: Composition-based stats. Identities = 291/785 (37%), Positives = 404/785 (51%), Gaps = 53/785 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 ++L I G VQGVGFRPF+++LA +L L G V N GV + + + E FL+++ Sbjct: 3 KKRLKLVISGAVQGVGFRPFIYRLATELKLTGWVNNSASGVFIEVEGSLENLENFLLKIP 62 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PP ++I S+E F IR S G ++PD ATC CL E+ P R Sbjct: 63 TEKPPRSQIQSIETTWLD-CIGYNSFEIRYSVSGEKTAIVLPDLATCSDCLNEIFDPNNR 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPF NCT+CGPR++II A+PYDR T M F +C C +EY +P DRRFHAQP ACP Sbjct: 122 RYGYPFTNCTNCGPRYSIIEALPYDRSQTTMKGFMMCCECQQEYENPRDRRFHAQPNACP 181 Query: 183 ECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP L + A Q AL+ A +K GKI+AIKG+GGFHL D N AV LR Sbjct: 182 CCGPQLALWNAHGEVLANQNLALKMAANAIKEGKILAIKGLGGFHLMVDGSNHTAVEELR 241 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVP-ELCDDIAPD 293 RK RP KP A+M P D + QLLT+P APIVL+ +K L +AP+ Sbjct: 242 QRKRRPHKPFALMYPSLDSAKSHCEISLLEEQLLTSPEAPIVLLKRKPHTINLWPFVAPN 301 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 GVMLP PL HLLL +L PLV TSGNLS +P I +AL L IAD FL+HNR Sbjct: 302 NPYWGVMLPYTPLHHLLLSDLNFPLVATSGNLSDEPICIEEGEALQRLSPIADLFLVHNR 361 Query: 354 DIVQRMDDSVVRESG---EMLRRSRGYVPDALALPP------------------GFKNVP 392 I++ +DDSVVR G +LRR+RGY P + P Sbjct: 362 PILRPVDDSVVRIMGGREMILRRARGYAPFPIMKSESRRKKLISLPTLPLTPSPPHPLSP 421 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 +L G LKNT ++R Q +SQH+GDLS + + + ++ +YDF PQ +V D Sbjct: 422 SLLATGGHLKNTVAILRDNQVFISQHIGDLSTSEALGAFYQVMDSLKGLYDFEPQIIVCD 481 Query: 453 AHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 AHP Y+SSQ+A+ +LP V HH+AH +C+ E V+ + DG G G++G + Sbjct: 482 AHPDYLSSQFAQSQSLPVIKVQHHYAHILSCMTEQGVKS---PVLGVAWDGTGYGDDGTI 538 Query: 513 WGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL---RFVPEWQNYSETAS 569 WGGE L + + + LPGGD A K+P R LA +N Sbjct: 539 WGGEFLLITEGNYQRVAHFQPFKLPGGDRAVKEPRRIALALIYQIFESFDGLENLPLFDH 598 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-AS 628 + +++ + + R +N P+ SS GR FD VA+ LG +S+EG+ A ALE + Sbjct: 599 FSIRELNLIKQMLSRNLNTPITSSVGRLFDGVASLLGIC-QDISFEGQGAIALEYVIGDL 657 Query: 629 CHGVTHPVTM--PRVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQ 683 +P + + ++ + + L + + FH+ L + + + Sbjct: 658 QTNAIYPYEILEETLPLVINWESIVRGILADLLDNLKPGEISAKFHNTLVEIIINIAEKI 717 Query: 684 ATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + ++ +GG N+ L R L +FT ++ Q +P DGG+SLGQ + A R Sbjct: 718 SQ----KKVIVTGGCFQNKYLTERAIKRLIQENFTPVWHQKVPPNDGGISLGQIMAAVTR 773 Query: 742 WLAGE 746 G Sbjct: 774 LELGR 778 >UniRef50_A0RG62 Hydrogenase maturation protein n=31 Tax=Bacillus cereus group RepID=A0RG62_BACAH Length = 793 Score = 1009 bits (2609), Expect = 0.0, Method: Composition-based stats. Identities = 281/769 (36%), Positives = 422/769 (54%), Gaps = 41/769 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 + +++G VQGVGFRPFV+++A++ +L+G V ND +GV + + + F+ + + P Sbjct: 28 KYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIHDIEFNSP 87 Query: 67 PLARIDSVE-REPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRY 124 LA + V+ E + + F I S + T I PD C CL E+ P RR+ Sbjct: 88 ELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRF 147 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 RYPFINCT+CGPR++II+ +PYDRP+T M FP+C CDKEY+D LDRRFHAQP AC +C Sbjct: 148 RYPFINCTNCGPRYSIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKC 207 Query: 185 GPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 GP ++ + + + ++ I LK GKI+AIKG+GG+HL D N AV LR RK Sbjct: 208 GPQVQLKTADGTNVPTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNHEAVKELRKRK 267 Query: 244 HRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 R KP A+M + + LL + PIVL++KK + D+AP+ N Sbjct: 268 KRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDVAPNNNTY 327 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 GVML PL HL+L+ L+ TS N+S +P + A+ L+GIAD +L+HNR+I Sbjct: 328 GVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFT 387 Query: 358 RMDDSVVRE--------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+DDS+VR +++RR+RGYVP+ + G VL LGA+LKNT CL + Sbjct: 388 RVDDSIVRGIDLDDEITKIQIIRRARGYVPNPIDFKEGST---NVLALGAELKNTICLTK 444 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN-L 468 GE+A +S H+GDL + I ++ + +Q I++ +P + D HP + S+++A + L Sbjct: 445 GEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKYAFDQKTL 504 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH A+C+ ++Q G V+ + LDG G G++G +WGGE L ++ + Sbjct: 505 PVVQVQHHHAHMASCMVDNQLD---GPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYQRA 561 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ---NWSVLARAIERG 585 + LPGGD A K+P+R L + E + ++ VL + I++G Sbjct: 562 AYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKG 621 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----SCHGVTHPVTMPRV 641 IN+PL SS GR FDAV++ LG T+ YEG+AA LE S +++ + Sbjct: 622 INSPLTSSMGRLFDAVSSLLGV-RETVQYEGQAAIELEQAIDINNSSNPLLSYEIVTSNG 680 Query: 642 DNQLDLATFWQQ----WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 ++D+ +++ L + + ++ FH + Q ++ GI LV SGG Sbjct: 681 IRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVLSGG 740 Query: 698 VIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 V N+ L L F + + +P DGG+SLGQ IAA R+ Sbjct: 741 VFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKD 789 >UniRef50_C0QP96 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Hydrogenothermaceae RepID=C0QP96_PERMH Length = 747 Score = 1007 bits (2604), Expect = 0.0, Method: Composition-based stats. Identities = 289/755 (38%), Positives = 406/755 (53%), Gaps = 37/755 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQ 63 +++ + G VQGVGFRPFV+ A + NL G V ND GV + + + + FL+ L Sbjct: 3 KHLKIHLTGAVQGVGFRPFVYNTALRHNLKGYVINDTHGVVIEVEGEEDDINRFLISLNT 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGER 122 PPLA I S E E S EFTI++S I+PD + C CL+EMN +R Sbjct: 63 EKPPLAHIFSQEIEELPLS-GFEEFTIKKSESKGKKEVFILPDISVCDQCLSEMNNKKDR 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYRYPFINCT+CGPRF+II +PYDRP T M F +CP C++EY+DP DRRFHAQP ACP Sbjct: 122 RYRYPFINCTNCGPRFSIIERLPYDRPNTTMKKFRMCPDCEREYKDPSDRRFHAQPNACP 181 Query: 183 ECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGPHL S AE+E AL+ A+ L GKI+A+KGIGGFHL CDA + A+ LR Sbjct: 182 VCGPHLSLYSSDRKFIAEREEALKIAVELLGKGKILAVKGIGGFHLVCDATDDKAIDLLR 241 Query: 241 ARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 RK R KP AVM D + D ++ +P PIV+V K L +AP L Sbjct: 242 ERKRRGEKPFAVMFRDIDQIKDYAEITPFEEAVILSPERPIVIVRSKKETGLSKGVAPYL 301 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + +GV LP +PL HLLL + PLVMTS NLS +P N++A L D L+HNRD Sbjct: 302 DRIGVFLPYSPLHHLLLNDYGKPLVMTSANLSDEPIVKDNDEAFEKLSVFTDYILVHNRD 361 Query: 355 IVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I R+DDSVVR +RRSRGY P + LP + VL +G KNT + + Sbjct: 362 IRNRVDDSVVRIIDKKISFIRRSRGYAPLPVKLPLRLERK--VLAVGGHQKNTIAIGFDD 419 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----N 467 +A LSQH+GDL + E + ++Y F P VV D HP Y S++WA + + Sbjct: 420 KAFLSQHIGDLETLDACRNFEEIINRFFDLYSFQPDVVVSDMHPAYHSTRWAEDYTEKNS 479 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HH+AHA + +AE G ++++ DG G G +G +WGGE L +Y + E Sbjct: 480 IPLIQVQHHYAHALSLMAESGI--REGKFLSVSWDGTGYGTDGNIWGGEFLLCDYEDFER 537 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW----QNYSETASVQQQNWSVLARAIE 583 + L GG+ A K+P R L+ + S+ + ++ R E Sbjct: 538 VYHFDYFRLLGGEKAVKEPRRVALSILFDMYGKDIYRLSEVQTLKSLTDKEMEIMFRVWE 597 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN 643 +G+N+PL+SS GR FDA A+ +G TLSYEG++ +E +PV + D Sbjct: 598 KGVNSPLSSSAGRLFDAAASIIGI-RQTLSYEGQSGMIMENYYRWDIEDHYPVDLR--DG 654 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 +D + +N ++ ++ + F ++L + ++ E + + +GGV NR Sbjct: 655 VIDWRPLFDALINDRSEIDIKITRFINSLGKVVLRIVDEYSDI----PSGLTGGVFQNRF 710 Query: 704 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 L ++ + + +P DGG+SLGQ + Sbjct: 711 LTEKILRMAEKRGLKIFTHKKVPPNDGGISLGQLL 745 >UniRef50_B7R9R7 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Thermoanaerobacterales RepID=B7R9R7_9THEO Length = 751 Score = 1000 bits (2586), Expect = 0.0, Method: Composition-based stats. Identities = 294/758 (38%), Positives = 412/758 (54%), Gaps = 31/758 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 Q+ I G VQGVGFRPFV+ +AQ+ NL G V N+ G+ + + + E F+ ++ Sbjct: 8 QIQARQINIFGIVQGVGFRPFVFNIAQKYNLKGIVYNNSSGLYIEVEGEEKDIEAFIREI 67 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 ++ P L+ ID ++ + +F I S + PD C CL E+ P + Sbjct: 68 KENPPSLSVIDEIQVREVE-VKEYKDFKIVGSKEDGGFVPVSPDMGVCEDCLRELKDPKD 126 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCT+CGPRF+II +PYDR T M FP+C C +EY DP DRRFHAQPVAC Sbjct: 127 RRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVAC 186 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 +CGP L +V + ++ LK GKIVAIKGIGGFHLA +A + AVATLR Sbjct: 187 FDCGPSLSFV---GEGCFDDEIKCVAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRR 243 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK R KP AVM+ + + +LL + PIVL+ KK +L IA DL+ Sbjct: 244 RKKRYGKPFAVMMRDVEEVKKYCIVSPEEERLLLSQRRPIVLLKKKGE-KLAKGIADDLD 302 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVMLP P+ +LL++E+ P+VMTSGN+S +P NE+AL L+ IAD FL++NRDI Sbjct: 303 TLGVMLPYAPIHYLLMEEIDFPIVMTSGNVSEEPICKDNEEALEKLKDIADVFLLNNRDI 362 Query: 356 VQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V R+DDSV + ++RR+RGY P + L K +L +G KNTFC+ +G Sbjct: 363 VNRIDDSVTSFNAGAERIIRRARGYAPQPILLKKEVKA--SILAVGGFYKNTFCMTKGHY 420 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 A +S H+GDL ++ + E + + ++ P+ V HD H GY+S+Q+A+ ++LP Sbjct: 421 AFISHHIGDLDNEKAFNYYIEQIERYKKLFRVDPEVVAHDMHKGYLSTQYAKSLDLPKIE 480 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HHHAH A+C+AEH VI + DG G G +G +WG E L + + E + L Sbjct: 481 VQHHHAHIASCMAEHNLD---EKVIGIAYDGTGYGTDGNVWGAEILVCDLKSFERIAHLK 537 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 LPG +LA K+ +R L + ++N+ E V + ++ + I+R IN S Sbjct: 538 YKPLPGNELAIKKIYRTALGFIFDNISFYKNFVE--QVDSRELDIILKQIDRKINTAYVS 595 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ 652 S GRFFDAVAA +G L +EG+AA LE+L A + +D + Sbjct: 596 SMGRFFDAVAALIGVRKEVL-FEGQAAMELESLMAESEEYYEYEILKEDGYVIDPELILR 654 Query: 653 QWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 Q + + FH+ + L GI +V SGG NR L RL Sbjct: 655 QIYEDYMKGFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLI 714 Query: 710 HY--LADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L+ F + +P DGG+SLGQ VIA + L G Sbjct: 715 EKLSLSGFEVYSNSKVPCNDGGISLGQAVIA-NKILEG 751 >UniRef50_B4W4C2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W4C2_9CYAN Length = 847 Score = 999 bits (2584), Expect = 0.0, Method: Composition-based stats. Identities = 332/824 (40%), Positives = 455/824 (55%), Gaps = 87/824 (10%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++R+RG VQGVGFRP V++LA+ NL G+VCNDG GV + + E F+ +L CP Sbjct: 14 EIRVRGTVQGVGFRPTVYRLAKACNLVGEVCNDGQGVLIYVSGTTEAIADFVQRLQIDCP 73 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA+I+S++R P+ + +FTI QS T+ TQI PDAATCP C AE R Y Y Sbjct: 74 PLAKIESIDRTPYPGDRTFHDFTITQSVNSTVQTQIPPDAATCPQCQAETFDSRSRWYNY 133 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF NCTHCGPR +IIR++PYDR T MA F +CP C +EY +RRFHAQP+ACP CGP Sbjct: 134 PFTNCTHCGPRLSIIRSIPYDRKHTSMADFAMCPDCAREYLAIENRRFHAQPIACPVCGP 193 Query: 187 HLEWV-SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + ++GE + + LK G+IVAIKG+GG HLACDA N V LR+RK R Sbjct: 194 KVWLERANGEKMDTSDPIDTVCTLLKQGEIVAIKGLGGIHLACDATNETTVQQLRSRKQR 253 Query: 246 PAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVD-------------KKYVPEL 286 KP A+M + L D ++L +P APIVL+D + ++ Sbjct: 254 YHKPFALMARDLEVIEQYCTLNDQEKELFQSPPAPIVLIDVIPNRANCRDAPWRVSTAKI 313 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 D +AP +G MLP PL HL++Q L P+++TSGNLS +P I N+ A L IAD Sbjct: 314 ADSVAPGQTTLGFMLPYTPLHHLIMQRLDYPIILTSGNLSDEPQCIDNQDASLKLGKIAD 373 Query: 347 GFLIHNRDIVQRMDDSVVRESG-------------------------------------- 368 L+HNRDIV R+DDSVVR Sbjct: 374 YLLLHNRDIVNRVDDSVVRVIQSKRQLQNFDGGGFSHIRVTKNDNCETRPYRGTMARHIH 433 Query: 369 -EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGI 427 + LRR+RGY P + LPPGF+ PP+L +G++LKNTFCL+R QA+LSQHLGDL + Sbjct: 434 IQTLRRARGYAPKPINLPPGFEKCPPILAMGSELKNTFCLLRDGQAILSQHLGDLENAAA 493 Query: 428 QMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAAC 483 +++ L L N++D P + D HP Y+S++ +E+ L + HHHAH AAC Sbjct: 494 FNAYQDTLNLYLNLFDHKPSAIATDKHPEYLSTKLGQELATANHLSLHPIQHHHAHIAAC 553 Query: 484 LAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAA 543 LAE+ PL+ ++ + LDG+G GE+G +WGGE L +Y+ + LG +A+ GG+ A Sbjct: 554 LAENNIPLNTPPILGIALDGLGYGEDGTIWGGEFLLADYQGFKRLGKFKPIAMIGGEQAI 613 Query: 544 KQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 QPWRN A + E+ + + Q+ +L + IE+GIN+PLASS GR Sbjct: 614 YQPWRNTYAHLIAAWDWNKLKQEYSDLDLIQFLDQKPHPLLNQLIEKGINSPLASSVGRL 673 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASC------HGVTHPVTMPRVDNQ----LDL 647 FDAVAAALG A SYEG+AA +EAL +P + ++D + LD Sbjct: 674 FDAVAAALGICRADCSYEGQAAIEMEALVTPDSLNYVKEVGAYPFNIGKLDQETELILDP 733 Query: 648 ATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 W L+ + A FH LA A ++++ ++ +GGV NR+L Sbjct: 734 YPLWLALLDDLQQDVSKSLIAAKFHQGLADAIATMVQQLRPDLISNQVILTGGVFQNRIL 793 Query: 705 RARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 ++ L +L +P DGGLSLGQ VIAAA+ L+ Sbjct: 794 LTQVRENLERMGMEVLTHSRVPPNDGGLSLGQAVIAAAQSLSYR 837 >UniRef50_Q3ZYW4 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Dehalococcoides RepID=Q3ZYW4_DEHSC Length = 763 Score = 996 bits (2577), Expect = 0.0, Method: Composition-based stats. Identities = 285/767 (37%), Positives = 396/767 (51%), Gaps = 36/767 (4%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFL 58 A + + G VQGVGFRPFV+QLA + L+G V N GVE+ + F Sbjct: 3 APKQTKRFAFALSGVVQGVGFRPFVYQLAAKHRLNGWVRNTSAGVEIEAEGAGQALDAFS 62 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMN 117 +L PP + I + ++ + F I+ S + PD ATC C ++ Sbjct: 63 EELTSLNPPQSVIKTFKQTEIPLT-GEEGFEIKPSQSLAGRFQLVSPDIATCTECQKDIF 121 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P RRYRYPF NCT+CGPRFTII +PYDRP T M F +CP C EY +PL+RRFHAQ Sbjct: 122 APRNRRYRYPFTNCTNCGPRFTIIEDIPYDRPLTTMKNFKMCPDCQAEYDNPLNRRFHAQ 181 Query: 178 PVACPECGPHLEWVSHGEHA-EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 P ACP CGP L + A L+ G+I+A++G+GGF LA DA N AV Sbjct: 182 PNACPICGPRLWLADKTGTELSNTDTIAEAAKLLQDGQILAVRGLGGFLLAADATNPQAV 241 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 ATLR RK RP+KP AVML + + LL +PAAPIVL +C + Sbjct: 242 ATLRNRKRRPSKPFAVMLANLEEARKYCSISKEEEHLLVSPAAPIVLCRWNKESPVCPET 301 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP N +G+ML PL HLLL+E+ PLVMTSGNLS +P A N++AL L IAD FL+ Sbjct: 302 APGQNYLGIMLSYTPLHHLLLKEINKPLVMTSGNLSEEPIAKDNDEALKRLCNIADYFLL 361 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I R DDSVV +LRR+RGY P + VL +G KNTFCL Sbjct: 362 HNRPIYSRYDDSVVMYEAGEKRVLRRARGYAPYPVQTH---FKGKEVLAMGPQEKNTFCL 418 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE-- 465 ++ A +SQH+GD+ + + E L + ++ P+ + D HPGY+++ A E Sbjct: 419 LKDGYAFVSQHIGDMQNPETLDSFEETLAVYLKLFRSKPEIIAADLHPGYIATALAEEWS 478 Query: 466 --MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 +++P V HHHAH A+CLAEH +VI + LDG G G +G +WGGE + Sbjct: 479 DRLDIPLVKVQHHHAHIASCLAEHGCD---DEVIGVALDGTGYGLDGNIWGGEFFCGGIK 535 Query: 524 -ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAI 582 L + LPGG+ A K+P+R ++ + E + + + ++ + Sbjct: 536 QGFSRQAHLEYLPLPGGEAAIKKPYRTAVSYVYTLLGE-EGLGFFKDIDPEKLDIIKSQL 594 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-GVTHPVTMPRV 641 + +N+PL SS GR FDAVAA G +Y+ + A LEA A +P + Sbjct: 595 NKKLNSPLTSSTGRLFDAVAALCGIC-RVANYDSQPAIELEAEAKDTEFAQFYPFELDLD 653 Query: 642 DNQ--LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + L + L+ + FH+ ++Q R+ + G+T + SG Sbjct: 654 KGIYLIRLKGILEGVLSNIKSGKTAAYISVKFHNTVSQIVLDTCRKLSAESGLTKVALSG 713 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GV NR L ++ L F +L + +P+ DG +SLGQ VIAA + Sbjct: 714 GVFQNRRLFRQVIQQLETEGFKVLTHKEIPSNDGCISLGQAVIAANQ 760 >UniRef50_B8D1S1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1S1_HALOH Length = 751 Score = 993 bits (2569), Expect = 0.0, Method: Composition-based stats. Identities = 284/762 (37%), Positives = 405/762 (53%), Gaps = 32/762 (4%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQ 60 +QL I G VQGVGFRPF+++LA++ NL+G V N GV V + + E F+ Q Sbjct: 1 MKKRRLQLEIEGIVQGVGFRPFIYRLARENNLNGWVLNTSGGVLVEVEGNQKTLEMFIRQ 60 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTP 119 + + PPLA+I +++ + + F I+ S Q+ PD A C CL ++ P Sbjct: 61 IDEESPPLAQITTIKSREVSVRED-SSFVIKDSRKTYYTQVQLPPDIAICNDCLHDIMDP 119 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRYRYPF +C +CGPRF II+++PYDRP T M F +CP C+ EY +PLDRRFHAQP Sbjct: 120 TNRRYRYPFTSCVNCGPRFKIIKSLPYDRPRTTMKKFKMCPECNTEYNNPLDRRFHAQPN 179 Query: 180 ACPECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 ACP CGP L GE + I LK G I+AIKGIGGFHL CDA S+ +A Sbjct: 180 ACPLCGPQLWLKKMSGEKCLTRDPIGLTIDLLKKGNIIAIKGIGGFHLMCDATESDVIAN 239 Query: 239 LRARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK RP KPLA+M+ + ++LT PIVL+DKK +L +IAP Sbjct: 240 LRTRKRRPDKPLALMMNKLTTVRKYCNVGSMEEEILTGIRRPIVLLDKKGE-KLPRNIAP 298 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + GVMLP PL +LL + L+ TSGN+SG P N +L+GIAD L HN Sbjct: 299 GIRYYGVMLPYTPLHYLLFDKGIEVLIATSGNVSGNPLEYQNGGVFENLKGIADYVLGHN 358 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I +DDSVVR G ++RR+RGYVP L + L LG D KNTFC R Sbjct: 359 REIYVPVDDSVVRVVGGKKRVIRRARGYVPQPLMVGGLDNG----LALGGDQKNTFCFAR 414 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 + A +SQ+LGDL + ++ + + +Y P +VVHD HP Y ++ +A Sbjct: 415 NKYAFISQYLGDLGNIDNYNNFKLMIDHFKELYKIKPDFVVHDLHPDYQTTYYASFYG-D 473 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAH A+C+AE+ VI L DG G+G +G +WGGE L ++++ + G Sbjct: 474 KIGVQHHHAHIASCMAENNID---EKVIGLAFDGTGLGNDGNIWGGEFLICDFKDFKRGG 530 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 L + +PGGD+A K+PWR ++ R + + + + ++ + + +G N P Sbjct: 531 HLNYMKMPGGDMAIKEPWRLAVSYLNRLRYDKADIINLLRIDEVEADIILKMLNKGFNCP 590 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD--NQLDL 647 SS GR FD VAA +G ++Y+ +AA LE++A + + V++ ++ Sbjct: 591 ETSSMGRLFDTVAALIGL-RKRITYQAQAALELESIADNNTEEIYHVSIEEKGQKYVVNT 649 Query: 648 ATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 ++ + + FH+ + + R GI ++ SGGV N+LL Sbjct: 650 DPMMGGIISDHKKGVKRSIISSKFHNTVIAFTLEMCRLIRHKYGINSVALSGGVFQNKLL 709 Query: 705 RARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 L L +F + +P D GLSLGQ IA+ R Sbjct: 710 LEMLCAGLKEQNFKVYSQAKIPCNDSGLSLGQLAIASNRRKD 751 >UniRef50_A1ASQ9 (NiFe) hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=A1ASQ9_PELPD Length = 780 Score = 992 bits (2566), Expect = 0.0, Method: Composition-based stats. Identities = 313/765 (40%), Positives = 416/765 (54%), Gaps = 39/765 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 +++ + G VQGVGFRPF+++LA + + G V N GV + + FL + Sbjct: 8 VERIRVEVEGIVQGVGFRPFIYRLAARYGISGWVRNTPAGVLLEGEGERSHLSAFLRDIS 67 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLA I SV E + F+I S+GG + QI PD C CL E+ P +R Sbjct: 68 AQAPPLAAISSVHSETISVT-GEGGFSILPSSGGENSAQISPDCDVCEDCLRELFDPRDR 126 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFINCT+CGPR++II A+PYDR FT M F +C C EY DP +RRFHAQP ACP Sbjct: 127 RYLYPFINCTNCGPRYSIITAIPYDRRFTTMERFAMCADCRAEYEDPANRRFHAQPNACP 186 Query: 183 ECGPHLEWVSHGEHAE-------QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 CGP + + L AA+ L+ G ++A+KGIGG+HLA DA N A Sbjct: 187 VCGPRIALLDSSGREVMQGGGGRGHDVLLAAVNLLQRGGVLAVKGIGGYHLAVDACNEEA 246 Query: 236 VATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LR RK R KP A+M P + + ++LL P PIVL+ K+ + Sbjct: 247 VANLRRRKQRDEKPFAIMAPDLARIDSFARCSETEQRLLGGPERPIVLLPKREATPIASL 306 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 +APD GVMLP+ PL HLLL+ LVMTSGN S +P A + +A L GIAD FL Sbjct: 307 VAPDNGYFGVMLPSTPLHHLLLRNNFIALVMTSGNQSDEPIAYRDSEAREQLAGIADLFL 366 Query: 350 IHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 H+R+I R DDS++R S LRRSRGYVP + LP P VL +G +LK T C Sbjct: 367 AHDREIHVRSDDSIIRVFHGSPLFLRRSRGYVPRGIRLPA---EQPSVLAVGGELKATVC 423 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 L R ++A LSQH+GDL + E + ++ I + P V HD HP Y+S+ +A ++ Sbjct: 424 LTRNDRAFLSQHIGDLKNSATLRSLEECVAHLEKILEIRPALVAHDLHPDYLSTAYAVDL 483 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +LP V HHHAH A+C+AE+ G+ I + DG G G +G +WGGE L YRE Sbjct: 484 PDLPRVAVQHHHAHMASCMAENSLE---GEAIGVIFDGTGYGLDGTVWGGEFLVGGYREF 540 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNWSVLARAI 582 G + VALPGGD A ++P+R L+ S V Q +L R + Sbjct: 541 RRQGHMRLVALPGGDAAVREPYRMALSYLFDAGERDFAALQLSCLGDVSAQERHLLQRML 600 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-HGVTHPVTMPRV 641 ERGINAPL SSCGR FDAV+A L + ++YEG+AA LEALA S +P ++ Sbjct: 601 ERGINAPLTSSCGRLFDAVSALLDV-RSRITYEGQAAIELEALAESAVTDREYPFSVEEF 659 Query: 642 DN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 LD+ + L P A FH+++A A + G+ +V SG Sbjct: 660 AGRLILDMRPALVELLKDLALGVPRAIMARCFHNSMAAATAGMCERIRCRNGLNRVVLSG 719 Query: 697 GVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 GV N+LL + LA DF + + +P GDGGL+LGQ VIA Sbjct: 720 GVFQNKLLVEGTLNRLAELDFQVFTHRLVPPGDGGLALGQAVIAG 764 >UniRef50_B3QYI7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYI7_CHLT3 Length = 781 Score = 991 bits (2564), Expect = 0.0, Method: Composition-based stats. Identities = 302/770 (39%), Positives = 409/770 (53%), Gaps = 34/770 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 + + ++ ++G VQGVGFRPFV+ LA+ L G V N GVE+ + + F Sbjct: 20 LTAEKNERRKVLVKGIVQGVGFRPFVYNLAESKGLSGFVTNSAAGVEIEVEGKSAELSAF 79 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEM 116 L +L PPLA I + E + F I S G T I PD A C CL E+ Sbjct: 80 LRELENFAPPLASITEMRVEKIPAKGA-SGFKILASKQGEKIATLISPDVALCGDCLKEL 138 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RRYRYPFINCT+CGPR+TII +PYDRP T M FPLC CD+EY P +RRFHA Sbjct: 139 LDPSDRRYRYPFINCTNCGPRYTIIDNIPYDRPNTSMKHFPLCSDCDREYHAPENRRFHA 198 Query: 177 QPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 QP ACP+CGP L + + LK+G IVAIKG+GGFHLACDA N A Sbjct: 199 QPNACPDCGPKLSLHKPDRSEILTADPISEIVRLLKLGHIVAIKGLGGFHLACDAENDEA 258 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 V LRARKHR KPLAVM+ + D + L + +PI L+ KK L + Sbjct: 259 VKRLRARKHRDEKPLAVMVQDLSSAQKFCQISDEEARALCSAQSPI-LLLKKNGTGLPES 317 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IAP +++G++LP P+ HLL+Q VMTS NLS +P AI N++A L IAD FL Sbjct: 318 IAPGNSQLGILLPYTPVHHLLMQSQLQAAVMTSANLSDEPIAIDNDEAFERLGQIADYFL 377 Query: 350 IHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 IHNR+I R DDSV ++RRSRGY P + + VL +G +LKNT C Sbjct: 378 IHNREIYLRCDDSVAAFWAGKLRLIRRSRGYAPRPILVQSK---GETVLAVGGELKNTVC 434 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 L++ QA LSQH+GDL + +++ +Q I++ P+ +VHD HPGY+SS W E Sbjct: 435 LLKENQAFLSQHIGDLENLDAYNHFQKTSAHLQRIFEAKPELLVHDLHPGYLSSHWVSEQ 494 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + + V HHHAH AAC+AEH+ G+VI T+DG G G +G +WGGE N Sbjct: 495 PEMASLAVQHHHAHMAACIAEHRLQ---GEVIGFTMDGTGYGTDGTIWGGEVFIGNECHA 551 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 + LPGGD A K PWR ++ ++ E + + N ++ + R Sbjct: 552 VRFASFEPMPLPGGDAAIKAPWRTGISYLMKSF--DGKLPELPFLPEHNTEMVCDMVRRK 609 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ- 644 N+PL SS GRFFDAVA+ G ++ YEG+AA A + +V + Sbjct: 610 FNSPLTSSAGRFFDAVASICG-EKKSVRYEGQAAIEFMQKADGLDVPPFEIDFGKVGHVR 668 Query: 645 -LDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 + + + ++ + FH L F A+ E + GI T+V SGGV Sbjct: 669 LMMIQPVIVSLVKAIREGESASRLSSRFHKTLVAYFTAMANEARSETGIKTVVLSGGVFQ 728 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 N +L L L F + + +P DGG+SLGQ +I A +L G+ + Sbjct: 729 NYILLEGLVSALLKQGFEVFSHEQVPTNDGGISLGQALIGRA-YLKGDYR 777 >UniRef50_Q6AQR7 Probable hydrogenase accessory protein HypF n=1 Tax=Desulfotalea psychrophila RepID=Q6AQR7_DESPS Length = 782 Score = 976 bits (2523), Expect = 0.0, Method: Composition-based stats. Identities = 303/784 (38%), Positives = 423/784 (53%), Gaps = 46/784 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLY 62 GV++ IRG VQGVGFRPF++ LA+Q L G VCN GDGV + E+ E F+ + Sbjct: 1 MKGVEIFIRGTVQGVGFRPFIYNLARQHGLSGTVCNTGDGVAIHTSCSKEELEAFIGAVR 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGE 121 PPL+RI S+E P FTI +S+G + + I PD A C CL+EM P + Sbjct: 61 SKAPPLSRIQSIEHGPKEIEIEDGRFTISKSSGTSSADASIPPDIALCADCLSEMQDPND 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 R+ YPFINCT+CGPRFTI+ +PYDR T M FP+C AC ++Y DP +RRFHAQP AC Sbjct: 121 PRFAYPFINCTNCGPRFTIVEKIPYDRQQTSMKVFPMCEACTRDYEDPGNRRFHAQPNAC 180 Query: 182 PECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 P CGP + W G E ++ L L K+VAI+G+GGFHL+C+A AVA LR Sbjct: 181 PLCGPQVSWHDQAGNKIETKSPLTDTAVALAANKLVAIRGLGGFHLSCNALEEKAVAQLR 240 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 RK RP KPLA+M+ D + + LL++ PIVL+ K+ +L +AP + Sbjct: 241 ERKRRPHKPLAIMVQSIDIAKKYCFISEQEIALLSSIEHPIVLLQKRPDTDLAQGLAPHI 300 Query: 295 NEVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 E+G+ML PL HLL QE CP LVMTSGN SG P N +A+ L I D FL+HN Sbjct: 301 TELGIMLAYTPLHHLLFQESTCPQALVMTSGNSSGTPICTGNAEAIDRLGPIVDNFLLHN 360 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDIV R+DDSV R SG+ +LRR+RGYVP + +P + G LK+TFCL + Sbjct: 361 RDIVTRIDDSVTRVSGKKPLILRRARGYVPSPIHCKW---TLPATIGCGGGLKSTFCLGK 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 SQH+GDLS+ ++E++ ++ ++D P+ V D HP Y+S+ +A+ + +P Sbjct: 418 KNSLFTSQHIGDLSNLESYDFFQESIEHLKKVFDIEPEIAVCDLHPDYLSTHYAKALGIP 477 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAHA A +AEH VIA+ LDG G G++G WGGE L+ + L Sbjct: 478 LYQVQHHHAHATAVMAEHGLK---DPVIAIILDGTGYGDDGTSWGGEILQADLTSFTRLA 534 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS----ETASVQQQNWSVLARAIERG 585 L + LPGGD AA +PWR ++ + + +++ L + Sbjct: 535 HLSHLRLPGGDKAATEPWRMGISALHSLYGDGLSDKNIPTALRQIERDKREPLLSMLNNN 594 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD--- 642 N+PL SSCGR FD V++ LG +SYEG+AA LE A C T + D Sbjct: 595 FNSPLTSSCGRLFDTVSSLLGIC-QKMSYEGQAAMELEDRARRCLNSTWKNDLISEDYDQ 653 Query: 643 -----------NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRG 688 +++ + L+ + A FH L + AL + T G Sbjct: 654 FPFLLDDRGITWEINSLQLIKTVLDDIQMGKKTPEIALRFHLLLIKNITALTLQLCTQTG 713 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 + +V SGG + N ++ L H +A + +++P DGG+SLGQ + + ++ Sbjct: 714 LNQVVLSGGCMQNAIILEGLRHTMATHNISVFTGENIPINDGGISLGQTITGGLQHVSRN 773 Query: 747 VQNG 750 G Sbjct: 774 SHEG 777 >UniRef50_B9R5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5I7_9RHOB Length = 773 Score = 969 bits (2507), Expect = 0.0, Method: Composition-based stats. Identities = 337/771 (43%), Positives = 439/771 (56%), Gaps = 35/771 (4%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQ 60 T +RI+G VQGVGFRPFVW LA++ L G V ND DGV + + FL + Sbjct: 1 MTVTATHVRIKGLVQGVGFRPFVWHLAREEGLTGHVLNDADGVLAEIFGAADRQQRFLER 60 Query: 61 LYQHCPPLARIDSVEREPF--IWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 L PPL+ I SVE +S P +F I +S G T IVPDAATCPAC+A++ Sbjct: 61 LRCEAPPLSEIVSVETAVLAGPFSPPPQDFQIVESVEGPATTGIVPDAATCPACVADIFD 120 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P RR+ Y F NCTHCGPR +I+ ++PYDR T MAAF +CP C EY DP DRRFHAQP Sbjct: 121 PANRRHGYAFTNCTHCGPRLSIVTSIPYDRASTSMAAFKMCPECQSEYDDPADRRFHAQP 180 Query: 179 VACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 ACP CGP L + G E ++ A ++L G+I+A+KG+GGFHLA DA N AVA Sbjct: 181 NACPACGPQLWAEAEGTRIETADPIRWAASRLAAGEIIALKGLGGFHLAVDATNDAAVAR 240 Query: 239 LRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKK----YVPELCD 288 LR +K RP KPLAVM+ + + D L+ AAPIVL+ + P L Sbjct: 241 LREKKKRPHKPLAVMVRDLEQARTICHVSDREAALMEDRAAPIVLLRLRAKSAEKPALSG 300 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +AP L++ G+MLPA PL HLL+ + PLVMTSGN S P I+NE A +L IADGF Sbjct: 301 HLAPGLDQCGLMLPATPLHHLLIAAVPGPLVMTSGNRSEDPQVITNEDARRNLGQIADGF 360 Query: 349 LIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L+H+R+IV R+DDSV+R +LRR+RG+ P LAL GF+ P VL +G +LK+TF Sbjct: 361 LMHDREIVNRLDDSVMRADRGGPVILRRARGHAPAPLALNNGFQTCPSVLAMGGELKSTF 420 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----Q 461 C +R AV+SQH+GDL + + + L L + +YDF P + D HP +VS+ + Sbjct: 421 CQLRQASAVVSQHMGDLESRPVLEDYEKTLTLYRQLYDFEPDRIAVDLHPDFVSTQAGRR 480 Query: 462 WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 A ++++P V HHHAH AAC+AEH P D V+ + LDG G+G +G +WGGE L Sbjct: 481 LAADLHIPLIEVQHHHAHLAACMAEHGLPPDSDPVLGVVLDGSGLGSDGTIWGGEFLFGG 540 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS-----VQQQNWS 576 Y+ E G +ALPGG AA++PWRNL+A + S +S + S Sbjct: 541 YKGFERAGHFLPIALPGGAAAAREPWRNLVAHLRAAFGTDWSPSSASSSLSPIFTGKTVS 600 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS--CHGVTH 634 V+ I+ G+N P+ASS GR FDAVAAALG SYEG+ LEALA + Sbjct: 601 VIEHLIDSGLNTPMASSAGRLFDAVAAALGICATRQSYEGQTGVLLEALARPYLSQATAY 660 Query: 635 PVTMPR-VDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 PV + L W+ L + FH L + + + A R I Sbjct: 661 PVDISSGTPGMLSWEVMWEALLGDLKRGTAPGLISARFHLGLIKAISEMATHIAGDRNIR 720 Query: 691 TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 T+ SGGV+ N +L L L F +L P LPA DGGLSLGQ IAA Sbjct: 721 TIALSGGVLQNAILAGGLYEQLSAQGFDVLVPGKLPANDGGLSLGQAAIAA 771 >UniRef50_B5VUX7 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Arthrospira RepID=B5VUX7_SPIMA Length = 796 Score = 969 bits (2506), Expect = 0.0, Method: Composition-based stats. Identities = 294/791 (37%), Positives = 408/791 (51%), Gaps = 65/791 (8%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 + + L IRG VQGVGFRPFV++LA QLNL G V N GV + + E F Sbjct: 5 SDQNLSRLSLTIRGAVQGVGFRPFVYRLATQLNLKGWVNNSVGGVFIEVEGCSESLERFQ 64 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAE 115 +L PP++ I S+E + + F IR S G + ++PD ATCP CL + Sbjct: 65 QRLQIEKPPISHIHSLEAVWLPLA-GYSHFEIRASQSTIQGAKSAIVLPDLATCPQCLQD 123 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + P RR+RYPF NCT+CGPR++II+ +PYDR T MAAFP+CP CD+EY P DRRFH Sbjct: 124 IFDPHNRRFRYPFTNCTNCGPRYSIIKTLPYDRENTTMAAFPMCPNCDREYHHPGDRRFH 183 Query: 176 AQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQP ACP CGP LE +H A + AL A A + G+IVA+KG+GGF L DA N+ Sbjct: 184 AQPNACPVCGPILELWNHQGQVLANRHHALLQAAAAMGRGQIVAMKGLGGFQLLVDATNA 243 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKY-VPEL 286 AV LR RKHRP KP AVM + A Q L +P APIVL+ + L Sbjct: 244 AAVEQLRVRKHRPHKPFAVMYRSIQQIAQVCDISAAEEQWLRSPQAPIVLLSRLPGASAL 303 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 D++AP +GVMLP PL HLL+ EL P+V TSGN S +P +AL L IAD Sbjct: 304 ADNVAPGNPNLGVMLPYTPLHHLLMAELDFPIVATSGNFSNEPICTDQTEALHRLGKIAD 363 Query: 347 GFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNV------------ 391 FL+HNR I + +DDSVVR ++RR+RGY P + + + Sbjct: 364 IFLVHNRPIARPVDDSVVRSVLGEQMVIRRARGYAPLPVTILDRDSHHTTHDSILSQSIS 423 Query: 392 ----PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 P +L +G LKNT + +Q +SQ++G+L ++EA+ + NIYDF P Sbjct: 424 NCQYPYILAVGGHLKNTIAIAVEKQVFISQYIGNLQSPQAFQAFKEAINSLSNIYDFKPD 483 Query: 448 YVVHDAHPGYVSSQWA----------REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 497 + DAHP Y+S+Q+A + +P V HH+AH A +AEHQ V+ Sbjct: 484 VIACDAHPDYISTQFAYQLAADIWQQEKRQVPVIPVQHHYAHVLAVMAEHQLSF---PVL 540 Query: 498 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF 557 + DG G G + +WGGE L +N + +G LPGGD A +P R L Sbjct: 541 GVAWDGTGYGLDETIWGGEFLLINKIGFQRVGHWRNFPLPGGDKAVLEPRRLGLGLLYEL 600 Query: 558 VPE----WQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLS 613 E + N + + ++ + + R +N P SS GR FDA+A +G +S Sbjct: 601 WGEQLWDYLNKQKISLGNFPQLKLILQMLNRKVNTPRTSSVGRLFDAIAFLVG-HRDNIS 659 Query: 614 YEGEAACALE-ALAASCHGVTHPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWA 667 +EG+AA LE A+ +P+ + + LD +Q L PV+ + Sbjct: 660 FEGQAAMDLEFAIGDVITDEHYPINLHQSSGKIILDWEPMVKQVLKDFNNHVPVSLISAK 719 Query: 668 FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPA 725 FH+ L +G + ++ + LV +GG NR L + L + + +P Sbjct: 720 FHNTLIEGIIMVSQKFPEV----PLVLTGGCFQNRYLLEKTIQRLTSEGIIHYWSKQVPT 775 Query: 726 GDGGLSLGQGV 736 DGGL+LGQ + Sbjct: 776 NDGGLALGQVM 786 >UniRef50_Q2LVY1 Hydrogenase maturation protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVY1_SYNAS Length = 778 Score = 969 bits (2506), Expect = 0.0, Method: Composition-based stats. Identities = 292/760 (38%), Positives = 404/760 (53%), Gaps = 35/760 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 M++ V+ G VQGVGFRP+++++A +L G VCN +GV + E F Sbjct: 13 MSR-KIRRVRCLFTGIVQGVGFRPYIYRMATNYSLGGFVCNIPEGVVAEVEGTAPQIEAF 71 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEM 116 L + + PP A + ++ TEF I S G I PD A C CL E Sbjct: 72 LSAVPKELPPAAALTALSNTDVSLL-GETEFQIISSRAEGNKAVLIAPDIAVCENCLREF 130 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 PG+RRYRYPFINCT CGPR TIIR +PYDR T MA FPLCP C EY +P +RRFHA Sbjct: 131 RDPGDRRYRYPFINCTDCGPRLTIIRDVPYDREKTSMACFPLCPQCRAEYENPANRRFHA 190 Query: 177 QPVACPECGPHLEWVSHGEHAEQE---AALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 +P ACP CGP L + + AI L GKI+A+KG+GGFHLA DA + Sbjct: 191 EPNACPSCGPKLWLTDENGTPFSDDFNDPIAKAIELLSKGKILAVKGLGGFHLAVDATDE 250 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELC 287 AV LR+RK+R KPLAVM+ + + D R+LL +P PIVL K+ E+ Sbjct: 251 GAVRRLRSRKYREEKPLAVMVRDLEAASKIAEIGDRERKLLFSPQRPIVLCRKRGAKEIA 310 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +AP + + G+MLP PL +LLL+ LVMTS N S +P I N +AL L+GIAD Sbjct: 311 PSVAPGVPDRGIMLPYTPLHYLLLENTLSALVMTSANQSDEPICIGNREALKRLKGIADA 370 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 +L+HNRDI+ R DDSV + M+RRSRGY P + P ++ P VL LG LK T Sbjct: 371 YLLHNRDILVRCDDSVATVTQGKTFMIRRSRGYAPKPI---PLLRSCPNVLALGPQLKTT 427 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 C+++G A LS H+GD+ + +E+L+LM+ I P + D HP Y +++ A Sbjct: 428 LCILKGNLAYLSPHIGDMDTPEARKFHQESLQLMERIAQCRPDVLACDLHPAYYTTRLAE 487 Query: 465 EM-NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 E+ + + HHHAH + +AE+ G VI L +DG G G +G WG E L + Sbjct: 488 ELPHRTVLRIQHHHAHIVSAMAENGLT---GKVIGLAMDGTGYGTDGTAWGCEFLLADEV 544 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE---TASVQQQNWSVLAR 580 + + G L LPG D A ++PWR ++ E+ ++ +L + Sbjct: 545 DFQRAGHLRPYPLPGSDRAVREPWRAAVSLLRESYGEFWREIAGNLPLKDHAPHFELLDK 604 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 + G+N+P SS GR FDAVAA LG +++EG+AA ALEA+A++ T+ + Sbjct: 605 MMAHGLNSPPTSSLGRVFDAVAALLGI-RQVVNFEGQAAMALEAMASAPAEKTYTFDIFE 663 Query: 641 VDN-QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 D LDL + + + A FH L++ AA+ + GI V SG Sbjct: 664 GDRIVLDLRPLIRAIVQEQLSGREPQKIASDFHRTLSRALAAVTAKIRMRTGIEKAVLSG 723 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 G NR+L +A L F + + LP DG ++LGQ Sbjct: 724 GCFQNRILLDSVARELEQEGFAVYLHRDLPPNDGCIALGQ 763 >UniRef50_B8I6F2 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridium RepID=B8I6F2_CLOCE Length = 790 Score = 966 bits (2498), Expect = 0.0, Method: Composition-based stats. Identities = 285/786 (36%), Positives = 410/786 (52%), Gaps = 50/786 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLY 62 G ++ I G VQGVGFRPF++ LA++ + G V N V + + D + F+ ++ Sbjct: 1 MTGYRIIITGIVQGVGFRPFIFNLAERFGMKGWVGNTDSNVIIEIDSDFQKVVDFINEIK 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGE 121 + P L+RI S+E + ++ Q F IR S I PD ATC CL EM + Sbjct: 61 KSAPVLSRIKSIEYKDIVY-QGFKNFEIRHSQKNSKGPVFISPDVATCCDCLREMKDKSD 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCT+CGPRFTII+ +PYDR T M F +C C +EY P DRR+H QPV+C Sbjct: 120 RRYRYPFINCTNCGPRFTIIKNIPYDRDNTTMKYFEMCENCRQEYTKPSDRRYHTQPVSC 179 Query: 182 PECGPHLEWVSHGEHAEQE-----AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 ECGPHL +E + +K G IVA+KGIGG+HLACD N AV Sbjct: 180 HECGPHLSIADETGKIMREIQSSRECITFTADLVKKGNIVAVKGIGGYHLACDGLNKKAV 239 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR RKHR KP AVM + + +LT+ A+PIVL++KK L + + Sbjct: 240 DRLRTRKHRDDKPFAVMAKDLRTAEKYCKINYVEKNILTSTASPIVLLEKKDGVILPESL 299 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGF 348 A +GVMLP P+ HLL +E P LVMTSGNLS +P +E+A+ LQGIAD + Sbjct: 300 AHLNRYLGVMLPYTPVHHLLFEEKGFPELLVMTSGNLSNEPIFYKDEEAVEGLQGIADAY 359 Query: 349 LIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPP-------GFKNVPPVLCLG 398 L +NR+I R DDSV R ++RR+RG+VP+ +++ +P VL G Sbjct: 360 LTNNREIYIRTDDSVTRVFNAKEYIIRRARGHVPNPVSINVHELLDMDKTIEIPSVLACG 419 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 +LKN FCL +G+ LS H+GDL ++ + +R + + ++D +PQ + +D HP Y Sbjct: 420 GELKNVFCLNKGKNFYLSHHIGDLENESTNIAFRNGIEHFKRLFDISPQLIAYDLHPNYY 479 Query: 459 SSQWAREMN-LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 SSQ+A + + ++ HH AH A+C+AE++ GDVI ++ DG G GE+G +WGGE Sbjct: 480 SSQYALKQRYVEKVSIQHHKAHIASCMAENKLK---GDVIGVSFDGTGYGEDGNIWGGEF 536 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN--------YSETAS 569 Y G L V +PG D A + PWR L+ V + Sbjct: 537 FTGGYYGFRRAGHLAYVMMPGSDSAVRHPWRMALSYLYASVQGVPDKVMEITNKLPAFMD 596 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 ++ + +E+ IN+P SS GRFFDAV+A LG +SYEG+AA LE A Sbjct: 597 RSKEEIIFTIKMLEKRINSPFTSSMGRFFDAVSALLGI-KTNISYEGQAAIELEYYADLS 655 Query: 630 HGVTHPVTMPRVDNQ----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMRE 682 + + + + ++ +Q ++ + + FH +A Sbjct: 656 CTDPYLFDIEKTVFEESFTINTGCTIKQIVDDILAGKGLGYISSRFHTTIAHIVLEGCLN 715 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 + +G+ +V SGGV N L L F + +P+ DGG+SLGQ ++A A Sbjct: 716 IRSRKGLKNVVLSGGVFQNITLLKMTVDSLEKQGFKVFIHSEVPSNDGGISLGQSIMAIA 775 Query: 741 RWLAGE 746 + + Sbjct: 776 QMIKKR 781 >UniRef50_Q726N9 [NiFe] hydrogenase maturation protein HypF n=11 Tax=Desulfovibrionales RepID=Q726N9_DESVH Length = 839 Score = 966 bits (2497), Expect = 0.0, Method: Composition-based stats. Identities = 309/790 (39%), Positives = 415/790 (52%), Gaps = 54/790 (6%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 T + + G+VQGVGFRPFV+++A L G V N +GV + ++ E F L Sbjct: 57 TPLRRRFVVSGQVQGVGFRPFVFRIATGHALTGTVSNTSEGVFIEVQGPHEAVEAFGDDL 116 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPG 120 PPLA++ S E E T+F I S+GG + I PD A C CLA+M P Sbjct: 117 VGKLPPLAQVVSCEHEDLPLVAGETDFIIVASSGGHGHQVLISPDMAVCDDCLADMRDPA 176 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRYRYPF NCT+CGPR+TI R++PYDR T MA FPLCPAC EY DP+DRRFHAQP A Sbjct: 177 GRRYRYPFTNCTNCGPRYTITRSIPYDRDKTSMACFPLCPACRAEYEDPMDRRFHAQPNA 236 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP CGP L + AE + A+ L G+I AIKG+GGFHLACDA + AV T Sbjct: 237 CPVCGPRLWLTARDGTTLAEGDYAITVTAHVLNTGRIAAIKGLGGFHLACDATDDAAVTT 296 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK RP KPLAVM+P D + +L+ + PIVL + L ++P Sbjct: 297 LRERKRRPHKPLAVMVPDMDTVRRIAAPTPDEERLILSQERPIVLCRARDDGPLASAVSP 356 Query: 293 DLNEVGVMLPANPLQHLLLQELQ-------------------CPLVMTSGNLSGKPPAIS 333 D + VGVMLP PL H+L L C LVMTSGN S +P + Sbjct: 357 DTDHVGVMLPYTPLHHVLFDTLADLRREGGTSSRRTPSASDVCALVMTSGNASNEPICLG 416 Query: 334 NEQALADLQGIADGFLIHNRDIVQRMDDSVVRES-----GEMLRRSRGYVPDALALPPGF 388 N ++L L IAD FL+H+RDI+ R DDSVVR +RR+RG+VP + LP Sbjct: 417 NRESLRRLAHIADAFLLHDRDILIRTDDSVVRAVQGEDGPLFMRRARGFVPRPVRLP--- 473 Query: 389 KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQY 448 + P VL G +LKNT C+ R + A +SQH+GD+ + +RE + +I P+ Sbjct: 474 DSGPCVLATGPELKNTLCITRNDMAFVSQHIGDMHNLETLGFFREIAAHLADILQVEPEA 533 Query: 449 VVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 VV D HP Y++++WA + LP + HH+AHA + LAE+ G + +TLDG G G+ Sbjct: 534 VVRDLHPDYMTTRWAEDCGLPVLALQHHYAHAYSVLAENGHE---GPALCVTLDGTGYGD 590 Query: 509 NGALWGGECLRVNYREC--EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE 566 +G +WGGE L V+ E E L + LPGG+ A ++PWR R + Sbjct: 591 DGTIWGGEFLYVDSLELEHERLAHFSRLPLPGGETAIREPWRIAQGALWRLGMFEPDSRV 650 Query: 567 TASVQ--QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA 624 + ++ ++ +++G+N P+ASSCGR FDAV+A LG +++YEG+AA LE Sbjct: 651 WPWLPHREEASRMVGLMLDKGVNTPMASSCGRLFDAVSAMLGLC-ESITYEGQAAILLER 709 Query: 625 LAASCHGVTHPVTMP--RVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAAL 679 + +P + LD A + + P A FH L QG A L Sbjct: 710 IQDMSETTPYPCPLKDGVQPMVLDTAQLFLHAYVDWAMETPPGIIARRFHLGLIQGVADL 769 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 G+TT+ SGGV+ N L A L L L ++LP DG +SLGQ Sbjct: 770 AASLCGAMGLTTVGLSGGVMQNLTLAAGLPEALRARGLVPLVHRTLPPNDGCISLGQAAW 829 Query: 738 AAARWLAGEV 747 R Sbjct: 830 GRRRLQRDNA 839 >UniRef50_C6QQX5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QQX5_9BACI Length = 758 Score = 962 bits (2489), Expect = 0.0, Method: Composition-based stats. Identities = 297/762 (38%), Positives = 406/762 (53%), Gaps = 35/762 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 +++ ++G+VQGVGFRPFV+QLA + ++ G V N+ DGV V + ++FL+ L Sbjct: 2 QKSIKVTVKGRVQGVGFRPFVFQLAHRYHIKGTVQNNMDGVTVFAEGEEKELQSFLLSLQ 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGE 121 P L+RID ++ + Q +F+I +S ++ ++P D A C CL EMN P Sbjct: 62 TEAPRLSRIDQLDVMEADY-QGFEQFSIIESERKGASSLVIPIDTAVCDDCLQEMNDPNN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RYRYPFINCT CGPR+TII +PYDRP+T M +F +C C KEY DPL+RR HAQP+AC Sbjct: 121 HRYRYPFINCTQCGPRYTIIEQLPYDRPYTSMKSFSMCEHCQKEYEDPLNRRHHAQPIAC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 P CGPH+ V A+ A L G IVAIKG+GG+HLACDA N AV LR Sbjct: 181 PVCGPHVALVDRNGRTLDGDAIDKAKQLLLSGAIVAIKGLGGYHLACDATNEQAVQQLRT 240 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK RP +PLAVM + D +++LT+P APIV++ +K L +AP L Sbjct: 241 RKQRPTRPLAVMAASLSVVKQMCEVNDEEKRVLTSPEAPIVVLKRKTTYPLAPSLAPGLK 300 Query: 296 EVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 VGVMLP PL HLLL E P LVMTS N SG P +EQAL DL+ IAD FL+HNR Sbjct: 301 TVGVMLPYTPLHHLLLDEEHIPVLVMTSANRSGVPILYKDEQALQDLKSIADYFLVHNRP 360 Query: 355 IVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV +DDSVV+ + LRR+RG+VPD + LG KN F R E Sbjct: 361 IVHPIDDSVVQIQNGNVDFLRRARGFVPDPFFTTSDVHE---IAALGGQQKNVFAFGRNE 417 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 Q L H+GDL + ++ ++ P+ V D HP Y + +E ++ Sbjct: 418 QIFLGPHIGDLQNMESIEHFQREYEHLRTWMGVEPKAVAVDMHPNYETWNIVKEWDVSVI 477 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH +C+ ++ L LDG G GE+G +WG E L + + LG L Sbjct: 478 PVQHHHAHMVSCMEDNGIKNS---CFGLILDGTGYGEDGHIWGFELLYGDASHYKRLGHL 534 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSETASVQQQNWSVLARAIERGINAP 589 LP G+ K+PWR + ++ E ++ E +Q +L + +E+ I+AP Sbjct: 535 TYTPLPSGERCIKEPWRTAVGMLGYYLGEKGYKLAIERFPDKQYEIHILKQMVEKDIHAP 594 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QLD 646 A +CGR FDAV+A L + +YEGEAA L L H + P +N ++D Sbjct: 595 KAGTCGRLFDAVSAFLHVCTHS-TYEGEAAIRLAELVDEGH-IYEPYPFELKENNIMEID 652 Query: 647 LATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITT--LVFSGGVIHN 701 +A W V A FH + A++R+ +V SGG +HN Sbjct: 653 VAAMWVAIAEDVKRNINVETIAGRFHQTVVSAAIAMIRKAVEEHPQYHREIVLSGGSMHN 712 Query: 702 RLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 R L L L F + +++P DGGL+LGQ +IAA R Sbjct: 713 RYLVKHLTTNLRRLGFNVYTHRNVPCSDGGLALGQLIIAANR 754 >UniRef50_Q01YU2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YU2_SOLUE Length = 725 Score = 958 bits (2478), Expect = 0.0, Method: Composition-based stats. Identities = 302/754 (40%), Positives = 399/754 (52%), Gaps = 48/754 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLY 62 +++R++G VQGVGFRPFV+ LA +L L G V ND G+ V +P F+ L Sbjct: 1 MERIRIRVQGIVQGVGFRPFVYNLALRLPLAGHVFNDSSGLVVEAEGEPHALAAFVAALR 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGE 121 PPLA + + T FTI S T + PD ATC CLAE+ P Sbjct: 61 TEHPPLAWVRDLSITELSPIGT-TGFTILPSVAETGKFALVSPDVATCAECLAEIFDPVN 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPF NCT+CGPR+TIIR +PYDRP T MAAF +CP C EY DP DRRFHAQP AC Sbjct: 120 RRYRYPFTNCTNCGPRYTIIRDIPYDRPSTTMAAFAMCPLCRAEYEDPADRRFHAQPNAC 179 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 P CGP L A + +L G+I+AIKG+GGFHLACDARNS AV LRA Sbjct: 180 PACGPALS-----------AGIPETQRRLAAGEILAIKGLGGFHLACDARNSAAVDALRA 228 Query: 242 RKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK R KP A+M+ D + A + LT P PIV++ ++ L +AP Sbjct: 229 RKRRSDKPFALMVRDLDAARELCVVDHVAARALTGPRHPIVILLRRDGVPLPGAVAPGNP 288 Query: 296 EVGVMLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 +G+MLP PL HLL LVMTSGNLS +P + N A L ++D L+H+RD Sbjct: 289 TLGIMLPYTPLHHLLFAGAPFSALVMTSGNLSEEPIVVENADARQRLGPVSDWQLLHDRD 348 Query: 355 IVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I R DDSVVR + ++RRSRGY P L + +P +L G +LKNTFCL +G Sbjct: 349 IYMRADDSVVRIFEGAERVMRRSRGYAPQTLD---LGRELPELLASGGELKNTFCLTKGT 405 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NLPT 470 A+LSQH+GDL + + + E L ++ ++ TP+ V +D HPGY+S+++A + Sbjct: 406 HAILSQHVGDLENYETLLFFEETLANLKKLFRVTPRAVAYDLHPGYLSTKFALAQTGIQQ 465 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HHHAH A+C+AE+ G VI + DG G G +GA+WGGE L Y + E Sbjct: 466 IGVQHHHAHIASCMAENHLD---GRVIGVAFDGTGYGLDGAIWGGEFLLAGYADFERRAH 522 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 L V L GGD A ++PWR+ L E A + + + I G N Sbjct: 523 LRYVPLAGGDAAVREPWRSALGY----------GVEVAGIPESRLRAVRSMIATGTNTVP 572 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 SSCGR FDAVAA +G +++EG+AA LEA+A +P + V ++LD Sbjct: 573 TSSCGRLFDAVAAIIGLRHE-VTFEGQAAIELEAIADPTCTTRYPFDI--VGDELDFRPM 629 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + + A FH+ LA + + + SGG N L Sbjct: 630 IECIVREHERPPTVAARFHNTLAAAIHEVCVRLRDEAAVNRVCLSGGTFQNMRLLGLTVA 689 Query: 711 YLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 L F + + +P DGGL+LGQ IAA R Sbjct: 690 QLRASAFEVYLHREVPPNDGGLALGQAAIAAERL 723 >UniRef50_B5YB71 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Dictyoglomus RepID=B5YB71_DICT6 Length = 742 Score = 955 bits (2469), Expect = 0.0, Method: Composition-based stats. Identities = 274/754 (36%), Positives = 395/754 (52%), Gaps = 35/754 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 +LR+ G VQGVGFRPF+++LA+ LNL G + N V++ ++ + E F+ L Sbjct: 1 MKSYKLRVWGIVQGVGFRPFIYRLAKSLNLRGWILNSTGSVQILIQGEEKDLEKFMELLL 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 + PPL+R + I + ++F I +S I PD A C CL EM P +R Sbjct: 61 KEAPPLSR-IEGIEKEEIEVEEISDFKILESKEDIGFNFISPDIAICEDCLREMRDPKDR 119 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFINCT+CGPR+TII +PYDR T M F +C C KEY DP RRFHAQP++C Sbjct: 120 RYNYPFINCTNCGPRYTIIEDLPYDRDKTTMKIFEMCEECYKEYHDPSSRRFHAQPISCY 179 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + E + + L GKI+AIKGIGGFHLACDA + V LR R Sbjct: 180 NCGPQIWIYG----EESKDLFKRISEYLDEGKILAIKGIGGFHLACDATQDDTVRKLRER 235 Query: 243 KHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RP+KP A+M+ + + + ++L + +PIVL+ K + ++ +AP N Sbjct: 236 KKRPSKPFALMMKDIETIKEYCFVSEEEEKILKSKQSPIVLLRIKDLKDISPLVAPGNNY 295 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVMLP P HL+ + PL+MTSGNLS +P NE+A+ L+ IAD F+ HNR+I Sbjct: 296 LGVMLPYAPYHHLIFDHFKKPLIMTSGNLSDEPIVKDNEEAMERLKNIADIFVFHNREIK 355 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R+DDSVV +++RR+RGY PD + +P P L LG +LKNTF L + Sbjct: 356 HRIDDSVVFVENKEVQIIRRARGYAPDPVKIPIKL---KPTLALGGELKNTFSLGKENYV 412 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--LPTQ 471 +S H+GDL D + E ++ ++ P+ +VHD HP Y+S+ A+ + + Sbjct: 413 FMSPHIGDLKDKETLEVYEETIQEYIRLFKIEPEILVHDLHPQYLSTDLAQRFKKYMEVR 472 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 + HH AH + L + + D+I T DG G GE+G +WGGE N E + + Sbjct: 473 AIQHHKAHFYSLLLDREIT---EDIICFTFDGTGYGEDGKVWGGEVFVGNIEEIKRVAHF 529 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 + GGD+A + P + L+ L+ PE + ++ + +V +ER N Sbjct: 530 KYFPIVGGDIAIENPRKIALSYILKNFPEDTD-KILPNIDELEKNVTKILLEREENVFYT 588 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN---QLDLA 648 SSCGR FD V+A LG + YEG+AA LE A ++ V+N ++D+ Sbjct: 589 SSCGRIFDLVSALLGI-RERIDYEGQAAIELEMHAMESKEESY-YPFRLVENEILEIDIL 646 Query: 649 T--FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 + A FH+ ++Q AL I + FSGGV NRLL Sbjct: 647 PSIEKIIKEKNKKDKRDIARKFHNTVSQIIIALSEIFREEYKINKIGFSGGVFQNRLLLE 706 Query: 707 RLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 L + F + Q +P DGG+SLGQ ++ Sbjct: 707 TTIPILKERKFEVYTHQKVPTNDGGISLGQMIMG 740 >UniRef50_C1F4L8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4L8_ACIC5 Length = 781 Score = 951 bits (2460), Expect = 0.0, Method: Composition-based stats. Identities = 287/771 (37%), Positives = 390/771 (50%), Gaps = 41/771 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 + + L +RG VQGVGFRP+++ LAQ+ L G V N G GV + + +F Sbjct: 7 LDSRQPARISLTLRGIVQGVGFRPYIYNLAQRHQLSGYVLNTGAGVTIEVEGAAASLHSF 66 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEM 116 + L PPLARID ++ F IR+S + + D C ACLA+ Sbjct: 67 IHTLPAQIPPLARIDDLQLAIIE-VIGERNFVIRESDRSQSSFALVPSDICLCDACLADT 125 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 RR YPF NCT+CGPR++I+ +PYDRPFT MA F +CP C +EY DP +RRFHA Sbjct: 126 RDSTNRRNWYPFTNCTNCGPRYSIVIDLPYDRPFTTMAEFSMCPDCRREYNDPTNRRFHA 185 Query: 177 QPVACPECGPHLEWVSHGEHAEQEA---ALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 +P ACP CGP L L QL G+I+A KG+GG+ LACDA Sbjct: 186 EPNACPVCGPKLSLSPATAEIPDGDSRAILTYIARQLISGRIIAWKGLGGYQLACDATRE 245 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 +AV+TLR RKHR KP A+M+ + R L + PIVL+ +K L Sbjct: 246 DAVSTLRRRKHRSEKPFAIMVAGITAAEQLCVVSPLERTALLSSQRPIVLLRRKTAANLA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLL------QELQCPLVMTSGNLSGKPPAISNEQALADL 341 ++P GVMLP+ P+ LL PLVMTSGNLS +P A+ N++A A L Sbjct: 306 ASVSPGNPTTGVMLPSTPMHDLLFLALRELAGASIPLVMTSGNLSEEPIAVDNDEAEAKL 365 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLG 398 +AD F+ HNR I R+DDSVVR + +RR+RG+ P + L G VL G Sbjct: 366 ADVADLFVHHNRRIHTRVDDSVVRVIDDEVLPIRRARGFAPQPVWLGMGEVQ---VLACG 422 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 A KNT CL + A SQH+GDL + + + + M ++ P+ + HD HPGY+ Sbjct: 423 AQQKNTLCLTKSGFAFPSQHMGDLENYETLEFFEQTRKRMCRLFHIEPEVIAHDLHPGYL 482 Query: 459 SSQWAREM-NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 S+QWA + V HHHAH AAC+AEHQ VI + DG G+G + +WGGE Sbjct: 483 STQWALRQSGIRHIPVQHHHAHIAACMAEHQLR---NPVIGVAWDGTGLGTDNTIWGGEF 539 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE-TASVQQQNWS 576 L + R + L V L GGD A ++PWR + L + A + Q+ Sbjct: 540 LIADLRSFQRAAHLRTVHLAGGDTAVREPWRVAYSYLLDTFIDQPPAPPSFAQLPQERTR 599 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL---AASCHGVT 633 V+ + + ++ SS GR FDAVAA +G T+SYEG+AA ALEA+ A Sbjct: 600 VVDTMLRQHLHTVPTSSAGRLFDAVAALIGIHA-TVSYEGQAAVALEAIAADANLTEPEP 658 Query: 634 HPVTMPRVDN-QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 +P + + QLD + P A FH L + R+ I Sbjct: 659 YPFNLIDDASMQLDFRPMIAALIEEVLSNEPKQLMAARFHATLVCAIVRVCRKIRETTHI 718 Query: 690 TTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 + SGG N+LL + L F + FP+++PA DGG+SLGQ IA Sbjct: 719 NQVCLSGGCFQNQLLLRGSRNTLRASGFEVYFPRAVPANDGGISLGQAAIA 769 >UniRef50_A8FUJ1 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Shewanella RepID=A8FUJ1_SHESH Length = 783 Score = 949 bits (2455), Expect = 0.0, Method: Composition-based stats. Identities = 270/777 (34%), Positives = 393/777 (50%), Gaps = 49/777 (6%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQ 60 N++ V++ + G VQGVGFRPFV++ A+ L G V N+G GV + ++ + E+F+ + Sbjct: 16 NSAVRVEIIVTGIVQGVGFRPFVYRYAKDEELCGFVLNNGQGVTIEVQGKWRNIESFIAR 75 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTP 119 PPLARID++ +P +F I S + + PD + C ACL E+N P Sbjct: 76 FDTSPPPLARIDTLSSKPIAIVDDCQDFIIVASDGNTSAVVAVSPDKSCCSACLEEINAP 135 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 R YRYPF NCT+CGPR+T+I+A+PYDR T MA+F +C C+ Y DP+DRR+HAQPV Sbjct: 136 DNRHYRYPFTNCTNCGPRYTLIKALPYDRKHTSMASFAMCSRCEASYLDPMDRRYHAQPV 195 Query: 180 ACPECGPHLEWVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 +CP+CGP L +S A AL + +L G+IVAIKG+GGFHL CDA N +AV Sbjct: 196 SCPQCGPQLSLLSSDGDIVSHADMALTETVQRLLQGEIVAIKGLGGFHLVCDATNHDAVQ 255 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVP--ELCDD 289 LR RK RP KPLAVM+ + LT+ PI ++ K L Sbjct: 256 RLRERKRRPGKPLAVMVSSLEMAKSIVTGSQFEWDQLTSIERPITIMTKNRSNTVNLSPA 315 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IAP ++++GV LP PL LLL+EL P+V TS N SG+P ++ +A L + D L Sbjct: 316 IAPGIDKLGVFLPYTPLHSLLLKELDIPIVATSANRSGEPIICDGKEIIAQLSEVVDSIL 375 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 HNR I+ DDSV++ G ++LR +RG+ P ++ P G + L +GA KN+ Sbjct: 376 DHNRPIINACDDSVIQCIGDEVQVLRLARGFAPLSIRNPTGSASHQ--LAVGAQQKNSIA 433 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 ++ VLS H+GDL + + L + +Y F+P+ V+ D HP Y S+WA+ Sbjct: 434 FGFADKMVLSPHIGDLFSLEAESYFEHTLATFKRLYQFSPKTVIRDKHPDYAPSKWAQRF 493 Query: 467 -----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 + + HHHAH + +A +Q V+ + DG G+G++ +LWGGE L + Sbjct: 494 IELNEGVKQLEIQHHHAHILSVMAVNQVK---DKVLGFSFDGTGLGDDQSLWGGEALIAD 550 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSV 577 E + + L GG+ A K P R LLA + + + + Sbjct: 551 VNGFERVCHIKPFMLIGGEQAIKDPKRLLLAILFQQYSLEELGALSLPILTKTDPRLIEN 610 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG----VT 633 L + + SS GR FDAVA LG +EG+A LEA A Sbjct: 611 LHKIWQSKSRCIETSSIGRIFDAVAVLLGLIEKNQ-FEGQAGMLLEAAANRFDDHIATEE 669 Query: 634 HPVTMPRVDNQLDLATFWQQWLN-------WQAPVNQRAWAFHDALAQGFAALMREQATM 686 ++P +D L T ++Q ++ + V A F ++L A L ++ + + Sbjct: 670 FCYSLPVIDGMWHLDTLFKQLVSSVTQETLTEQRVCAIARGFMNSLGDAVAKLAKQHSPL 729 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 +V SGGV NR L L L P +P DGG++LGQ Sbjct: 730 ----PVVLSGGVFQNRYLSELCITKLNEQGSKRLMPHHVPINDGGIALGQLWYGLHH 782 >UniRef50_Q55638 Carbamoyltransferase hypF n=1 Tax=Synechocystis sp. PCC 6803 RepID=HYPF_SYNY3 Length = 767 Score = 947 bits (2449), Expect = 0.0, Method: Composition-based stats. Identities = 306/775 (39%), Positives = 416/775 (53%), Gaps = 49/775 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG--VEVRLRE-DPETFLVQLYQ 63 V ++++G+VQGVGFRPFV+ LAQ++ L+G V N G V + E F +L + Sbjct: 3 KTVAIQVQGRVQGVGFRPFVYTLAQEMGLNGWVNNSTQGATVVITADEKAIADFTERLTK 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP I+ + E + T FTIR S+ G I+PD +TC ACL E+ P +RR Sbjct: 63 TLPPPGLIEQLAVEQLPL-ESFTNFTIRPSSDGPKTASILPDLSTCSACLTELFDPSDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCTHCGPR+TII A+PYDR T MA F C C++EY+ P DRRFHAQP ACP Sbjct: 122 YLYPFINCTHCGPRYTIIEALPYDRCRTTMARFRQCTDCEREYKQPGDRRFHAQPNACPR 181 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L + + AE AL A+ LK+G I+AIKG+GGFHL CDA + AV LR Sbjct: 182 CGPQLAFWNRQGQVIAEANEALNFAVDNLKVGNIIAIKGLGGFHLCCDATDFEAVEKLRL 241 Query: 242 RKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RKHRP KPLAVM + + +LL + AAPIVL++KK L ++IAP Sbjct: 242 RKHRPDKPLAVMYGNLGQIVEHYQPNNLEVELLQSAAAPIVLLNKKKQLILVENIAPGNP 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 VGVML PL HLLL++L+ P+V TSGNL+G+ I N AL LQ IADGFL+H+R I Sbjct: 302 RVGVMLAYTPLHHLLLKKLKKPMVATSGNLAGEQICIDNIDALTRLQNIADGFLVHDRPI 361 Query: 356 VQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 V +DDSVV+ LRR+RGY P + LP +L +G KNT + + Q Sbjct: 362 VCPVDDSVVQIVAGKPLFLRRARGYAPQPITLPKP--TQKKLLAMGGHYKNTVAIAKQNQ 419 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 A +SQHLGDL+ + EA+ + +YDF+PQ +V D HP Y S Q+A LP Sbjct: 420 AYVSQHLGDLNSAPTYQNFEEAIAHLSQLYDFSPQEIVADLHPDYFSHQYAENQALPVTF 479 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HH+AH A +AEH V+ + DG G G +G +WGGE L++ + + L Sbjct: 480 VQHHYAHILAVMAEHGV--MEESVLGIAWDGTGYGMDGTIWGGEFLKITQGTWQRIAHLQ 537 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEW----------------QNYSETASVQQQNWS 576 L G A K P R LA + +N + Q N Sbjct: 538 PFHLLGNQQAIKYPHRIALALLWPTFGDDFSADSLGNWLNFNNGFKNKINSRLNQDLNNK 597 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-HGVTHP 635 L + +RG APL SS GR FD +A +G +++EG+AA ALEA +P Sbjct: 598 NLRQLWQRG-QAPLTSSMGRLFDGIATLIGLINE-VTFEGQAAIALEAQIMPNLTEEYYP 655 Query: 636 VTMPRVDNQL--DLATFWQQW-LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 +T+ + +L D + ++ N A FH++L + ++ +GI + Sbjct: 656 LTLNNKEKKLAVDWRPLIKAITTEDRSKTNLIATKFHNSLVNLIITIAQQ----QGIEKV 711 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV--IAAARWL 743 GG N L A L A F+ L+P+ LP DG + +GQ + I A +++ Sbjct: 712 ALGGGCFQNCYLLASTITALKKAGFSPLWPRELPPNDGAICMGQLLAKIQARQYI 766 >UniRef50_B4S9J1 (NiFe) hydrogenase maturation protein HypF n=9 Tax=Chlorobiaceae RepID=B4S9J1_PROA2 Length = 778 Score = 946 bits (2447), Expect = 0.0, Method: Composition-based stats. Identities = 295/765 (38%), Positives = 410/765 (53%), Gaps = 36/765 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED----PETFLVQL 61 + ++L + G VQGVGFRP+V++LA L L G + N GV + ++ + E F+ +L Sbjct: 17 ARRLRLAVNGIVQGVGFRPYVYRLATSLGLSGSIRNTASGVLIEVQAETPLLLERFVQEL 76 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPG 120 PPLA I SV + F I S G + T I PD A C C +E+ P Sbjct: 77 GSEAPPLAEIFSVVADEIPAQSG-NGFVILSSDDGEDVETLIPPDIALCDDCRSELLDPL 135 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRY FINCT+CGPRF+I+ +PYDRP T M F +C C +EY +PLDRRFHAQP A Sbjct: 136 DRRYRYAFINCTNCGPRFSIVERLPYDRPLTSMKGFTMCEKCGREYGNPLDRRFHAQPNA 195 Query: 181 CPECGPHLEWVSHGEH-AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP+CGP L+ + G L A+ +LK G IVA+KG+GGFHLA DA + +AV L Sbjct: 196 CPDCGPALQLLDAGGEPINAPDPLSLALQKLKDGDIVAVKGVGGFHLAVDATDQSAVMNL 255 Query: 240 RARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYVPE-LCDDIAP 292 R RK R KP AVM + D R L + AP+VL+ KK L D+AP Sbjct: 256 RERKGRERKPFAVMARSLGSAEKVAQVSDEERVALRSLQAPVVLMHKKASASLLAPDVAP 315 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +G+MLP +PL L+++E LVMTS N S +P A+ N++A++ LQGIAD FL+HN Sbjct: 316 ANDRIGLMLPYSPLHVLMMEEGPEFLVMTSANSSEEPIALENDEAVSRLQGIADYFLVHN 375 Query: 353 RDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I R DDS V+ + +RR RGY P + + P VL G ++KNT C+++ Sbjct: 376 RPIHLRCDDSVTMVMSGALRQIRRGRGYAPLPV---LLSSDGPSVLAAGGEMKNTVCVLQ 432 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-NL 468 G QA+LSQH+GDL + +++ MQ+I+ P+ ++ D HP Y+S+QWA+ ++ Sbjct: 433 GSQALLSQHIGDLKNYVAYEHFQQVAEHMQHIFQVRPEAIISDMHPSYLSTQWAQNQSDI 492 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH +CLAE+++ G + + LDG G G +G +WGGE L + Sbjct: 493 PVLHVQHHHAHLVSCLAENRFD---GQAVGIILDGTGYGTDGTVWGGEVLIGDASGFFRF 549 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 L V +PGGD AA PW+ + E A+ + +A + R +NA Sbjct: 550 ASLEPVRMPGGDRAALFPWKAAAGYLFHTYG---HIPEIAAFEGCFVEGIADLLARQVNA 606 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD---NQL 645 P ASSCGR FDAV+A G +SYEG+AA L A G + L Sbjct: 607 PPASSCGRLFDAVSALCGLCRE-ISYEGQAAIELMHAAGIAEGKPFAWEVVSAGSDRWHL 665 Query: 646 DLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 +A Q L V+ + FH + + F+ + G+T++ SGGV N Sbjct: 666 SVAPMVQDIVTALGSAMSVSDISRRFHVTIVKMFSDIALRACRFSGLTSVALSGGVFQNP 725 Query: 703 LLRARLAH--YLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L+ L L +L +P+ DGGLSLGQ VI G Sbjct: 726 LVFEGLVSDLQLHGIEVLTHSQVPSNDGGLSLGQAVIGRHWVKTG 770 >UniRef50_D1B205 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B205_SULD5 Length = 744 Score = 944 bits (2440), Expect = 0.0, Method: Composition-based stats. Identities = 265/746 (35%), Positives = 383/746 (51%), Gaps = 32/746 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + I G VQGVGFRPFV+ LA + L G V N+ GV + + E+F L+ Sbjct: 5 IRFRYGIEGIVQGVGFRPFVYTLALRYGLFGFVLNNEKGVVIEVEGSFMSLESFESALFH 64 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGER 122 P LARID +E Q F I ST G+ ++ I+PD + C ACL E++ P R Sbjct: 65 ELPSLARIDFFTKEEIPP-QYEKSFEIAHSTKGSHKSSLILPDMSLCDACLKELHDPNNR 123 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY Y F NCT+CGPR++I++ +PYDRP T M F +C AC KEY +PLDRR+HAQP++C Sbjct: 124 RYHYFFTNCTNCGPRYSIVKTVPYDRPNTSMHPFCMCEACQKEYTNPLDRRYHAQPISCI 183 Query: 183 ECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 ECGP L S A EAAL A ++ G IVA+KG+GGFHL CDA N V LR Sbjct: 184 ECGPTLFLRSIEGKIVATNEAALHHLAALIRAGNIVAMKGMGGFHLVCDASNEKVVHRLR 243 Query: 241 ARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVD-KKYVPELCDDIAPD 293 RK R +KP AVM + + ++ +T+ PIVLV + + +AP Sbjct: 244 ERKKRASKPFAVMFKTIEAIEAVCEVGIKEKEAITSLLRPIVLVKHQTKNTLIAPSVAPR 303 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 L+ +GV LP PL +L + L+ P+V TS NLSG+P +Q + L + D +L +NR Sbjct: 304 LDRLGVFLPYTPLHVMLFEYLKNPMVATSANLSGEPILYDAKQVVEKLSHVIDYYLDYNR 363 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 +IV DDSVV+ G+ ++R SRG P + ++ +LC+GA KN + Sbjct: 364 EIVNSSDDSVVQFVGDARILMRSSRGIAPQSFRFVG--EDERKILCVGAHQKNAIAIYWN 421 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 Q V+S ++GDL + L + Y+F P+ +V D HP Y S+QWA++ +P Sbjct: 422 HQMVISPYIGDLDTLASCELFEAMLERFKRFYNFEPELIVADKHPRYFSTQWAQKQGIPY 481 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH+AH + + EH+ V+ + DG G GE+G +WGGE L + + E + Sbjct: 482 VLVQHHYAHILSAMCEHKL---NETVLGIAWDGTGYGEDGTIWGGEFLVCDREKYERVAY 538 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPL 590 AL GGD + K R L + + E N L + + IN+PL Sbjct: 539 FEPFALLGGDASIKDIKRILASLLWDALGEDANAVLLEYFDALALKRLHQVYHKKINSPL 598 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATF 650 SS GR FDAVA G +SY+GE+ +E L + VT + ++ Sbjct: 599 CSSVGRLFDAVAVLCGL-EGEVSYDGESGLLIEGLFNPSIREHYTVTFR--EKEIGYKVM 655 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + + + + P + A F + L F + ++ + V +GGV NR L +L Sbjct: 656 FIEMIQDKEP-SLIASKFLNTLVYIFNEVTQKYPYKK-----VVAGGVFQNRTLLEQLLE 709 Query: 711 YLADFTLLFPQSLPAGDGGLSLGQGV 736 + L FP ++ DGG+ +GQ Sbjct: 710 K-REEKLYFPHNIAINDGGICVGQLY 734 >UniRef50_D0IAG7 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAG7_VIBHO Length = 794 Score = 943 bits (2438), Expect = 0.0, Method: Composition-based stats. Identities = 329/790 (41%), Positives = 453/790 (57%), Gaps = 46/790 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLY 62 G ++RIRG VQGVGFRP VW++A+ L+L G V NDG+GV V L + E F+ L Sbjct: 1 MTGYRIRIRGVVQGVGFRPTVWRVARGLSLKGFVLNDGEGVIVALWCNYELASRFVEVLK 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGE 121 PPLA I SV + P +F I +S +N I DAA C C E P Sbjct: 61 HEQPPLASISSVHLQFAALGAPPDDFFIAESDDTAQINAGIPVDAAMCAECAEETLNPAS 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPF NCTHCGPR TII+A+PYDRP T MAAFPLCP C++EY++P DRRFHAQPVAC Sbjct: 121 RRYRYPFTNCTHCGPRLTIIKALPYDRPKTSMAAFPLCPQCEREYQNPADRRFHAQPVAC 180 Query: 182 PECGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 P CGP + A+QAA+ ++ GKI+A+KG+GGFHL CDA N + Sbjct: 181 PACGPTVWLCDAEGQEISPSKIGAIDAIQAAVHYIRQGKILAVKGLGGFHLVCDATNQDV 240 Query: 236 VATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYV------ 283 V TLR RK RP KP AVM+ A+ + AA ++L + ++P+V++ + V Sbjct: 241 VDTLRRRKQRPDKPFAVMMKDAEQVGLYCQPSPAALEMLQSVSSPVVIMPTRNVTASLNT 300 Query: 284 ---PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + +AP+L E+G+MLPA P+ LL ++ PLVMTS NLSG P N +AL D Sbjct: 301 EGCGVIATAVAPNLGELGIMLPATPMHLLLCHDVALPLVMTSANLSGNPQCTDNREALED 360 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L+GIAD +++HNRDIV R DDSV R++ ++LRR+RG P + LPPGF+ +L + Sbjct: 361 LKGIADIWVLHNRDIVTRADDSVFRQTDQGLQILRRARGIAPSPIELPPGFEGTSSILAM 420 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G ++KN FCL+ A++SQ++GDL + ++ L Q +Y FTP V D+HP Y Sbjct: 421 GGEVKNAFCLLTSHGAIVSQYIGDLERVRVWEDFQRMLSHYQALYRFTPDRVAIDSHPEY 480 Query: 458 VSSQWAREM--NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 ++S++A+ + + + HHHAH AAC+ ++Q P+D +V+ + DG+G GENG LWGG Sbjct: 481 LASKFAKSVYDDQIITEIQHHHAHVAACMGDNQLPIDHENVLGVVFDGLGYGENGTLWGG 540 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS---VQQ 572 E L +Y + +G L VALPG A QPWRNL+ + + ++ Sbjct: 541 EFLLADYHTFKRIGHLETVALPGASKAIVQPWRNLIVWLQHSGIDATDKRAVFEALGIKP 600 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 S + I+ G+N+P +SS GR FDAV+A L SYEG+AA LE LAA+ Sbjct: 601 NVASTILSMIQTGLNSPNSSSVGRLFDAVSALLSVCIHEQSYEGQAAIELETLAATGASD 660 Query: 633 T---HPVTMP-RVDNQLDLATFWQQWLNWQAP---VNQRAWAFHDALAQGFAALMREQAT 685 +P T+ + +LD A WQ + A+ FH +LA+ ++ Sbjct: 661 VTDIYPFTIRDGLPARLDPAPMWQAIVRDVLSFQEPGFIAYKFHVSLAKAIGDMVAHLCQ 720 Query: 686 MR----GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 G+ +V SGGV NRLL L F +L Q +PA DGGL+ GQ +IAA Sbjct: 721 HFHVSSGLPKIVLSGGVFQNRLLLKMTVKILNQQGFNVLNHQQVPANDGGLAFGQALIAA 780 Query: 740 ARWLAGEVQN 749 A L+G Q+ Sbjct: 781 AASLSGNKQS 790 >UniRef50_Q3ABW2 Hydrogenase maturation protein HypF n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABW2_CARHZ Length = 754 Score = 942 bits (2435), Expect = 0.0, Method: Composition-based stats. Identities = 262/758 (34%), Positives = 388/758 (51%), Gaps = 36/758 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLY 62 ++ + G VQG+GFRPF+W++A++ + G V N GVE+ + E FL + Sbjct: 2 KVAKKIVVSGLVQGIGFRPFIWRIARKWEIKGWVKNSLAGVEILAEGEEENVNKFLAAIK 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGE 121 + PPLA I+ + P S F I +S IVP D C CL E+ + Sbjct: 62 KEKPPLAVIEKISVIPLNLSGNFETFEIIESQRDRKGVLIVPADLPVCGDCLQELRDSSD 121 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY+YPFINCT+CGPR+TII +PYDRP T M FPLCP C KEYR+P DRRFHA+PVAC Sbjct: 122 RRYQYPFINCTNCGPRYTIIEKLPYDRPHTSMKIFPLCPECAKEYRNPEDRRFHAEPVAC 181 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 P CGP L ++ A+ + LK G IVA+KG+GG+HLA D N V L Sbjct: 182 PACGPRLFLYDKEKNLLAKDGEVIHKTQELLKKGFIVALKGLGGYHLAADPFNVKTVLLL 241 Query: 240 RARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RKHR AKP A+M+ + A +LLT+ PIVL KK ++ +++PD Sbjct: 242 RQRKHREAKPFALMVKNLTVAKKHVYISKAEEKLLTSNVCPIVLCRKKKSSKIVKEVSPD 301 Query: 294 LNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + +G+MLP P +LLL+ L+MTS NLS +P +++ L+ IAD F+++NR Sbjct: 302 NDYLGIMLPYTPFHYLLLEHF-EALIMTSANLSEEPIVYQDDEVFLKLKDIADFFVVNNR 360 Query: 354 DIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I++ +DDSV ++S +LRR+RG P L + +L LG LKN+F + + Sbjct: 361 PILRPVDDSVAMVYKKSPVILRRARGLAPLPLKVRGM---KEGILALGGQLKNSFAITKD 417 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM--NL 468 LSQ+ GDL + ++ + + + ++FTPQ V +D HPGY SS+ E L Sbjct: 418 NYVYLSQYFGDLDNLPSRLAYMKGIDDFCRFFEFTPQIVAYDLHPGYFSSELVEEKYSKL 477 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV-NYRECEH 527 + HH AH AA +AE + + + DG G GE+G +WGGE + + Sbjct: 478 KKCPIQHHKAHLAAVVAEKRIK---APFMGVIFDGTGYGEDGMIWGGEFFVAFTPEDYQR 534 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L L GD A K+PW++ L+ + N +++ + + + Sbjct: 535 IAHLKYFPLLDGDEAIKKPWKSALSLLNEVQVDVANLI-FQDIERMELEFAQKRLAKQ-- 591 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM--PRVDNQL 645 SS GR FD ++A LG T+SYEG+AA LE +A + T+ ++ ++ Sbjct: 592 KIFTSSVGRLFDGISALLGL-KTTISYEGQAAILLETIADRSERGCYDFTILQEKIPYEI 650 Query: 646 DLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 D L + FH+ + + A L + GI ++ +GGV NR Sbjct: 651 DFRPLLLDVLADLKKGVNKKVISGKFHNTIVEMIAGLGKIVNKQYGIQKVILAGGVFQNR 710 Query: 703 LLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 +L + L + P +P D G++LGQ +A Sbjct: 711 VLLEKTFISLKRLGLKPIIPSYIPINDQGIALGQAYLA 748 >UniRef50_A7NKB8 (NiFe) hydrogenase maturation protein HypF n=12 Tax=Bacteria RepID=A7NKB8_ROSCS Length = 779 Score = 939 bits (2427), Expect = 0.0, Method: Composition-based stats. Identities = 318/766 (41%), Positives = 409/766 (53%), Gaps = 41/766 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFL 58 ++ + +L +RG VQGVGFRPFV+ LAQ+L L G V ND DGV + + + F Sbjct: 10 DQSQNIRRRLMVRGMVQGVGFRPFVYNLAQRLGLGGFVLNDSDGVTLEIEGPASALDAFE 69 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMN 117 L PPLARID++ EP S+ T F I S T NT I PD ATC CL E+ Sbjct: 70 QTLRTSPPPLARIDAIGAEPV-ASRGETHFRIETSRAATVRNTLISPDVATCDDCLRELF 128 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RR+ YPFINCT+CGPRFTI+ +PYDR T M FP+CPAC EY DPLDRRFHAQ Sbjct: 129 DPADRRFGYPFINCTNCGPRFTIVLDVPYDRAQTTMRVFPMCPACRSEYDDPLDRRFHAQ 188 Query: 178 PVACPECGPHLEWVS-----HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 P AC CGP L + + L A A L G I+AIKG+GG+HLACDA + Sbjct: 189 PNACAVCGPSLAFHWWSTEFRPRLPVHASPLDQAAAALAQGAILAIKGLGGYHLACDALD 248 Query: 233 SNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPEL 286 S AVA LR RK R AKP A+M P + + LL + PIVL+D + Sbjct: 249 SAAVARLRVRKQREAKPFALMAPDLEAIQRLCSVNPDEEALLESRRRPIVLLDALPNVPV 308 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQEL-----QCP--LVMTSGNLSGKPPAISNEQALA 339 +AP +G+MLP PL HLLL+ P LVMTSGNLS +P A ++ A+A Sbjct: 309 APSVAPGYATLGIMLPYTPLHHLLLRAYAKEAPGRPAVLVMTSGNLSDEPIAYRDDDAVA 368 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLC 396 L IADG L HNRDI R DDSV R ++LRRSRGY P+ + L F P+L Sbjct: 369 RLASIADGMLTHNRDIHMRCDDSVARIVAGGVQLLRRSRGYAPEPVTLTLHFP--RPLLA 426 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +G LKNTFCL + A LS H+GDL + +RE +R ++D P+ V +D HP Sbjct: 427 VGGHLKNTFCLAKEHDAFLSHHIGDLENLETLTSFREGVRHFARLFDCEPEVVAYDLHPE 486 Query: 457 YVSSQWAREMNLPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 Y++++ A ++P V HHHAH A+ LAEH VI + DG G G +G++WG Sbjct: 487 YLATKEALASDIPLKIGVQHHHAHIASVLAEHGIE---DPVIGVAADGTGYGIDGSIWGC 543 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETASVQQ 572 E L + RE L + LPGGD A +Q WR R + + +++ Sbjct: 544 EVLIADLREFTRFAHLAYIPLPGGDAAVRQVWRIGATYLQRAFGDAFLDLDIPFVQRIRR 603 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 Q W+++AR IERGINAPL SS GR FDAVAA G L YEG+AA LE +AA Sbjct: 604 QQWTLIARMIERGINAPLTSSLGRLFDAVAAIAGIRDHAL-YEGQAAIELETVAAQDDRP 662 Query: 633 THPVTMPRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 + ++D + + APV + FH +A+ A Sbjct: 663 YPFALLDGAPLRIDALPTIRAIVEDLRAGAPVALVSGRFHSTVAEALAQACERARATGAP 722 Query: 690 TTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLG 733 + SGGV NR L L L F +L + +P DGGL LG Sbjct: 723 AVVALSGGVFQNRRLTELLVARLERTGFRVLLNRRVPPNDGGLCLG 768 >UniRef50_UPI0001C1650F Hydrogenase maturation protein HypF n=2 Tax=Nostocaceae RepID=UPI0001C1650F Length = 803 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 309/791 (39%), Positives = 427/791 (53%), Gaps = 59/791 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 Q+R+RG VQGVGFRP V++LA+ L GDVCNDGDGV +R+ E F+ QLY CP Sbjct: 5 QIRVRGTVQGVGFRPTVYRLAKNAGLKGDVCNDGDGVLIRIVGSEEKITAFVQQLYDQCP 64 Query: 67 PLARIDSVEREPFIWSQLPT-----EFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 PLA I + R P S EF I S + T+I PDAATC C E+ P Sbjct: 65 PLAHIHELIRSPLYGSNDFHTDELIEFIIAPSMETPVKTEIAPDAATCGECQQEIFDPFS 124 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 R +RYPF NCTHCGPR +I++A+PYDR T M FP+C C++EY D +RRFHAQPVAC Sbjct: 125 RYFRYPFTNCTHCGPRLSIMQAIPYDRNNTSMVDFPMCGECNREYEDVNNRRFHAQPVAC 184 Query: 182 PECGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 CGP + A L+ G+IVAIKG+GGFHLACDA Sbjct: 185 FRCGPRAWLERADGQPISGDMFSMLDEVDAVCTLLQKGEIVAIKGLGGFHLACDATQETV 244 Query: 236 VATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 V LR RK R KP A+M + + D + LLT+PAAPIVL+ L + Sbjct: 245 VEKLRQRKKRYHKPFALMARDINIISQYCQISDLEKDLLTSPAAPIVLLKINPQNNLPHN 304 Query: 290 -------------IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN-E 335 IAP N +G MLP PL HL+L+ ++ P+V+TSGN++ +P I N + Sbjct: 305 SIKSQIGNPIARAIAPGQNTLGFMLPYTPLHHLILRRMKVPIVLTSGNIADEPQCIDNSD 364 Query: 336 QALADLQGIADGFLIHNRDIVQ---RMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP 392 L IAD FL HNRDI+ VV + ++LRR+RGY P + LPPGF+ P Sbjct: 365 DIKKKLVSIADLFLFHNRDIINRVDDSVVRVVNQKVQILRRARGYAPAPIILPPGFEKTP 424 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 P+L +G +LKNTFCL+R +A+LS+HLGDL + ++E L L N++ P + D Sbjct: 425 PILAMGGELKNTFCLLRSGEAILSEHLGDLENPSAFTNYQETLNLYLNLFAHKPAIIAID 484 Query: 453 AHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 HP Y+SS+ R++ + + HHHAH AACL E++ PL+ V+ + DG+G GE Sbjct: 485 KHPEYLSSKLGRQLAVNNEIELHEIPHHHAHIAACLGENKIPLNSQPVLGVAFDGLGYGE 544 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV------PEWQ 562 + WGGE L +Y C+ L V + GG + QPWRN A + ++ Sbjct: 545 DSTFWGGEFLLADYSNCQRLATFKPVPMIGGKQSIYQPWRNTYAHLNSALNWQEVQEQYP 604 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + +QQQ +L + +E+ IN+PL SS GR FDAVAAA+G +YEG+AA + Sbjct: 605 SLEIVQFLQQQPLKLLDQMVEKNINSPLVSSVGRLFDAVAAAIGICREECTYEGQAAIEM 664 Query: 623 EALAAS---CHGVTHP--VTMPRVDNQ--LDLATFWQQWLNW---QAPVNQRAWAFHDAL 672 E+ ++ ++P + ++D + A W+ L Q + + A FH L Sbjct: 665 ESSISTEILNDISSYPSHQNIEKLDGMYYIHTAPIWKGILEDINQQVGMGEIAAKFHLTL 724 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGL 730 A ++ + + +GGV NR+L + L +L ++P DGG+ Sbjct: 725 ANLIIETVKLLSREYKTNQVALTGGVFQNRILLQQTTKLLQNMGMEVLTHSNVPPNDGGI 784 Query: 731 SLGQGVIAAAR 741 SLGQ +I AAR Sbjct: 785 SLGQAMIMAAR 795 >UniRef50_A8EUQ4 Transcriptional regulatory protein HypF n=2 Tax=Campylobacterales RepID=A8EUQ4_ARCB4 Length = 749 Score = 933 bits (2413), Expect = 0.0, Method: Composition-based stats. Identities = 243/754 (32%), Positives = 378/754 (50%), Gaps = 39/754 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQHCP 66 ++ I G VQGVGFRPF++ LA + ++ G V ND +GVE+ +E+ E F+ ++ + P Sbjct: 6 KISIFGIVQGVGFRPFIYNLAIKYDIKGWVKNDENGVEIEAYSTQENIENFINEIKSNPP 65 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGERRYR 125 LA+I +++ E + F I QS+ T I PD A C C+ ++N G RY Sbjct: 66 VLAKITNIKIEKNNQIKEYKNFEIIQSSSSKDKTTIISPDIAICDDCIKDVNDIGNFRYN 125 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y NCT+CGPR++II+ +PYDR T M F LC C+ EY++PL+RR+HAQPVAC +CG Sbjct: 126 YSLTNCTNCGPRYSIIKTVPYDRANTSMNEFKLCKKCEDEYKNPLNRRYHAQPVACEDCG 185 Query: 186 PHLEWVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P++ + A++ +K G ++A+KGIGGFH+ CDA N V LR K Sbjct: 186 PNMTLYNINNSILSYNIKAIEQTANLIKDGYVIAVKGIGGFHIVCDATNDKVVNKLREIK 245 Query: 244 HRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 +RP KP AVM + + ++LT+ PIVLV K+ L IAP+++++ Sbjct: 246 NRPNKPFAVMFNNINSIKQYTNMNYQEEEILTSKEKPIVLVKKRPNTNLSSYIAPNISKL 305 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G + + HLL + LQ P+V TS NL +P S ++ + L I D L +NRDIV Sbjct: 306 GCFIANCGIHHLLFKYLQNPIVATSANLKDEPIIRSKDEIIGKLGNIVDFVLDYNRDIVN 365 Query: 358 RMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 DDS+++ LR +RGY P + + KN VLCLGA+ K+T L + Sbjct: 366 SSDDSIIQNVENYKIKLRNARGYAPTHIKIEKDLKNK--VLCLGANQKSTIALGFKNNFI 423 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-----NLP 469 LS ++GDL+ + + +N YDF P VV D HP Y S+++A ++ N+ Sbjct: 424 LSPYIGDLNSISSMEYFNRTINSFKNFYDFVPDTVVCDLHPKYESTKYAFKLLQDNPNIK 483 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH+AH + +AE+ +V+ DG G G++G +WGGE + +E + + Sbjct: 484 LIQVQHHYAHILSVMAENGLE---DEVLGFAFDGTGYGDDGNIWGGEVFIASRKEYKRIN 540 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE----TASVQQQNWSVLARAIERG 585 + L GG++A K+P R L+ + + + ++ L ++G Sbjct: 541 HIKYFRLLGGEMAIKEPKRVALSLLFDIFTLDEILALDSFVVKAFSKEEIKTLYTMWQKG 600 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 +NAP SS GR FDA+++ T ++EGE +E + + +D + Sbjct: 601 LNAPFCSSIGRLFDAISSFANIL-HTQTFEGETGLLIEENYDNSIKDNYEY--KILDENI 657 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D+ Q + + + F + L + + +VFSGGV N+ L Sbjct: 658 DITPMISQIIEDKDKK-VISSKFINTLVNIIIEI----SNKDKNLPVVFSGGVFQNKTLL 712 Query: 706 ARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVI 737 L F +P D G+S+GQ Sbjct: 713 ELLIKKFKEQGRVFYFNIDVPTNDEGISIGQLYY 746 >UniRef50_A6QAU9 Hydrogenase maturation protein HypF n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAU9_SULNB Length = 740 Score = 932 bits (2409), Expect = 0.0, Method: Composition-based stats. Identities = 272/753 (36%), Positives = 380/753 (50%), Gaps = 43/753 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLYQH 64 ++ I G VQGVGFRPF++ LA + NL G V N GVE+ + D + FL + Sbjct: 3 TYKIEIEGTVQGVGFRPFIYSLAARFNLKGSVLNGTQGVEIVINATSADLDNFLQAIKNE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQ-STGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLA ID + Q +F I GG +I PD + C AC E+ P +RR Sbjct: 63 LPPLASIDHIRTTELPLEQ-FQDFQIIATEDGGEKTVRIPPDVSICKACEKELFDPTDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFI CTHCG R++II +PYDR T M F +C C KEY DPLDRR+HAQP+ C + Sbjct: 122 YGYPFITCTHCGVRYSIIYDLPYDRKNTSMKFFEMCEMCTKEYNDPLDRRYHAQPIGCYQ 181 Query: 184 CGPHLEWVSHGEHA---EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP L + + A ++ + A L G I+A+KG+GG+HL CDA N AVA LR Sbjct: 182 CGPGLSLLDNQCSALSVKRSEIIDMASQLLLDGNILAVKGVGGYHLMCDATNEEAVAKLR 241 Query: 241 ARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 RK RP+KP AVM+ D + LL + PIVL++ K L +AP++ Sbjct: 242 ERKRRPSKPFAVMVKNMDMAHQLAVISSKEEALLESKERPIVLLNAKRQT-LNAHVAPNI 300 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + +G+ LP PL LLL L PLV TS N++ +P ++L L + D L HNR Sbjct: 301 SRIGLFLPYTPLHLLLLHTLNRPLVATSANVTDEPICTD-RESLEKLSDVYDYVLDHNRK 359 Query: 355 IVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 IV DDS VVRE LRR+RGY P ++ LP VL +GA+ K+T + + Sbjct: 360 IVNGCDDSVVMVVREQKVTLRRARGYAPSSVKLPFKLSKR--VLSMGANQKSTVAIGFDD 417 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN---- 467 Q +LS H+GDL G +++ + ++ IY F P+ +VHD HP Y S++ A ++ Sbjct: 418 QVILSPHIGDLDSIGSVEYYKKNIGTLERIYGFEPEVIVHDKHPQYESTKVALSLSAQRS 477 Query: 468 -LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 L V HH+AH +AE G V+ + DG G G++G LWGGE L +Y E Sbjct: 478 TLNAVAVQHHYAHILGVMAEKGIE---GKVLGVAFDGTGYGDDGNLWGGEFLVCDYEGYE 534 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAIE 583 + L L GG A K+P R L+ + + + A E Sbjct: 535 RVAHLNYFKLLGGAKAIKEPRRMALSLLFELYGKEALALQHPVLDAFSPSELRTYYIAWE 594 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN 643 +G+N PL+SS GR FDAVA+ +S+EGE+ LE L +P D Sbjct: 595 KGLNGPLSSSAGRLFDAVASLTDVC-HVMSFEGESGMLLEELYDGSVEGYYPFGY--DDG 651 Query: 644 QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 ++D+ ++ + + FH L + + G+ LV SGGV NR+ Sbjct: 652 RIDILPMIKEIVKESDRTVAVSKFFH-TLVEIIMTI----HKAFGL-PLVLSGGVFQNRI 705 Query: 704 LRARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 L + + D + F P DGG++LGQ Sbjct: 706 LLNLMMERVPD--IYFLNRFPPNDGGIALGQAA 736 >UniRef50_C5B8Z2 [NiFe] hydrogenase maturation protein HypF, putative n=65 Tax=Gammaproteobacteria RepID=C5B8Z2_EDWI9 Length = 774 Score = 931 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 431/758 (56%), Positives = 510/758 (67%), Gaps = 23/758 (3%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR--EDPETFLVQLYQHC 65 + LRI+GKVQGVGFRP+VWQ+AQ L LHG+V ND GV + +R D +T + +LY C Sbjct: 5 AIALRIKGKVQGVGFRPYVWQIAQTLGLHGEVSNDAGGVWLVVRLPADLDTLIQRLYADC 64 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA ID++ER P+ + F I S G M+TQIVPDAATCP CLAEM P RRY Sbjct: 65 PPLAHIDTIERHPWAETPA-DGFRIVDSRQGAMDTQIVPDAATCPRCLAEMRDPANRRYG 123 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCTHCGPRFTIIR MPYDRPFT MA FPLCPAC +EY DP DRRFHAQP AC CG Sbjct: 124 YPFINCTHCGPRFTIIRRMPYDRPFTAMADFPLCPACAREYHDPADRRFHAQPTACALCG 183 Query: 186 PHLEWVSHGE--HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P + E EAA QA L G IVA+KG+GGFHLACDA N A+A LR RK Sbjct: 184 PTMWSCGADGADRREGEAAWQAVTRSLDAGHIVAVKGLGGFHLACDAENDAAIARLRERK 243 Query: 244 HRPAKPLAVMLPVADGLPDAARQ--------LLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RP KPLA+MLP L R LL++PAAPIVLV + +AP L+ Sbjct: 244 RRPGKPLALMLPDLSWLARYCRAAPDAGLQALLSSPAAPIVLVPA--SDAVPAQVAPGLD 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 EVGVMLP PL HLL+ + PLVMTSGN SG+PPA+ N QALADL GIAD +L+HNRDI Sbjct: 302 EVGVMLPGTPLHHLLMAHIGRPLVMTSGNASGQPPALDNAQALADLAGIADLWLLHNRDI 361 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 VQR DDS+VR + E MLRR+RGYVPD +ALP F +P V +G DLKNTFCL++ + Sbjct: 362 VQRADDSLVRYAPEGSEMLRRARGYVPDTIALPASFSMLPDVAAVGGDLKNTFCLLQRGR 421 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NL 468 A+LSQHLGDL + IQ Q+ + +L+ Y F+P+ + D HPGY S + A++ L Sbjct: 422 ALLSQHLGDLGEARIQQQFLQTWQLLLQTYQFSPRAIACDRHPGYHSHRLAQQQADVRGL 481 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 P V HHHAH AAC+AEH +I L LDGIG GE+G LWGGECLRV+YR L Sbjct: 482 PLIAVQHHHAHLAACMAEHGIAPQDTPLIGLALDGIGYGESGELWGGECLRVDYRGYTRL 541 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINA 588 GGLPAVALPGGDLAA+QPWRNLLAQ L FVP+W Y ET +Q +NW +LARAI+R +N Sbjct: 542 GGLPAVALPGGDLAARQPWRNLLAQLLCFVPDWPRYPETQRIQAKNWPLLARAIDRELNC 601 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD-NQLDL 647 P ASSCGR FDA AAAL +S+EGEAAC LEA A PVT+ + +L + Sbjct: 602 PRASSCGRLFDAAAAALDICHEQISFEGEAACRLEAQAWQAWPQETPVTLKIDEQGELAM 661 Query: 648 ATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 FW+ WL+WQ V RA AFH A+A G AAL+R A G TLV SGGV+HNRLLR Sbjct: 662 GDFWRDWLSWQTSVPLRALAFHRAIADGLAALLRYHAEREGCQTLVLSGGVLHNRLLRQL 721 Query: 708 LAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 L LAD+ LL P+ LPAGDG L+LGQ +IAA Sbjct: 722 LLARLADYRLLLPERLPAGDGALALGQAIIAAHCLKDA 759 >UniRef50_A8ZNU8 Ni-Fe hydrogenase maturation protein HypF n=2 Tax=Cyanobacteria RepID=A8ZNU8_ACAM1 Length = 834 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 298/812 (36%), Positives = 426/812 (52%), Gaps = 79/812 (9%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQ 60 T +QL I+G VQGVGFRPF+++LA +L L G V ND GV + + PE FL Q Sbjct: 11 MTHQRLQLTIQGAVQGVGFRPFIFRLATRLKLRGWVSNDTQGVVIEVEGGPERLNQFLAQ 70 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG 120 L + P LA I++++++ FTIR S G T ++PD ATC CL E+ P Sbjct: 71 LQANPPVLAEIETIKQKCIPPL-GEHTFTIRPSQNGPKTTLLLPDVATCADCLRELFNPS 129 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPFINCTHCGPR++IIRA+PYDR T MA+F +CP C EY++PL RRFHAQP+A Sbjct: 130 DRRYRYPFINCTHCGPRYSIIRALPYDRGNTAMASFHMCPDCLSEYQNPLSRRFHAQPIA 189 Query: 181 CPECGPHL--------EWVSHG--------------EHAEQEAALQAAIAQLKMGKIVAI 218 CP CGP + WVS+ E E A+ A L+ G IVA+ Sbjct: 190 CPTCGPIVEVGYWQKERWVSNQLQGQAVQQNQEGIAEKTEGLGAIGLAAVALRQGLIVAV 249 Query: 219 KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPA 272 KG+GGFHL DARNS+AV LR RK RP KP A+M P + + + +LL +P Sbjct: 250 KGVGGFHLLVDARNSDAVKRLRTRKKRPNKPFALMYPSLERVKHTCEVSELEAELLQSPK 309 Query: 273 APIVLVDKKY---VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKP 329 APIVL+ +++ + D++AP + +GV+LP P+ HLL+ +L P+V TSGNL+G P Sbjct: 310 APIVLLQRRHLSLADPIADEVAPGCSHLGVLLPYTPIHHLLMADLDFPIVATSGNLNGAP 369 Query: 330 PAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDAL---- 382 + + E+AL DL+ IAD FLI NR I+ +DDSVV+ ++ RR+RGY P L Sbjct: 370 ISFNGEKALDDLKSIADLFLIQNRPILHPIDDSVVQVINGQTQLRRRARGYAPLPLSVTF 429 Query: 383 -------------ALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQM 429 P +L +G+ LKNT L + +SQHLGDL Sbjct: 430 PSHHSSPKGLSATPQSTRPPKRPTILAVGSHLKNTIALSLDDHVFMSQHLGDLDTVPSID 489 Query: 430 QWREALRLMQNIYDFTPQYVVHDAHPGY----VSSQWAREMNLPTQTVLHHHAHAAACLA 485 ++++ L+ + +Y+ P V DAHP Y + A++ +P +V HH+AH AC+A Sbjct: 490 RFQQTLQALLQLYECQPNLVACDAHPDYASTQAAQALAQQWQVPLLSVQHHYAHVLACMA 549 Query: 486 EHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQ 545 E V+ + DG G G + +WGGE L++ E +G LPGGD AA++ Sbjct: 550 EQHL---AAPVLGIAWDGAGYGLDETVWGGEFLQITPTGFERVGYWRPFFLPGGDQAARE 606 Query: 546 PWRNLLAQCLRFVP----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAV 601 P R + EW+ + + Q + VL ++R +N PL SS GRFFDA+ Sbjct: 607 PRRTAMGLLYTCFGGEIFEWEGLAPLKAFSQPSAQVLQSMLDRSLNTPLTSSVGRFFDAI 666 Query: 602 AAALGCAPATLSYEGEAACALEALAAS-CHGVTHPVTMPRV-DNQLDLATFWQQWLNW-- 657 A+ T +EG+AA ALE++ +P + +D L Sbjct: 667 ASLTDL-MQTTHFEGQAAMALESILGRVATEDDYPFHLSSSLPFVMDWEPMLIAILADID 725 Query: 658 -QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--D 714 + + FH+ L + + + +V +GG N+ L + H L Sbjct: 726 QGVDTSWISTKFHNTLVEIIVQIAHQIGEPY----IVLTGGCFQNQYLSEKAIHRLRENQ 781 Query: 715 FTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 + + Q +P DGG++LGQ ++AA R AG Sbjct: 782 YRPYWHQQVPTNDGGIALGQ-IMAAHRHYAGR 812 >UniRef50_B4SCQ3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCQ3_PELPB Length = 849 Score = 929 bits (2401), Expect = 0.0, Method: Composition-based stats. Identities = 304/840 (36%), Positives = 408/840 (48%), Gaps = 107/840 (12%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQ 60 + +LR+ G VQGVGFRPFV++LA +L G +CN GV + ++ F + Sbjct: 19 SAEERRRLRVNGMVQGVGFRPFVYRLAVACDLKGFICNTASGVLIEVQGQLSLLNEFSRR 78 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTP 119 L PPLA I+++E F I S G T I PD A C C E+ P Sbjct: 79 LLGERPPLAFIETIEEMSLPCV-SEEAFLIGNSGSGVGVETLIPPDIALCSDCRRELLDP 137 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RR+RYPFINCT+CGPR+TI+ +PYDRPFT M F +C AC++EY DPLDRRFHAQP Sbjct: 138 ANRRFRYPFINCTNCGPRYTIVDRLPYDRPFTSMHGFTMCEACEREYHDPLDRRFHAQPN 197 Query: 180 ACPECGPHLEWVSHGE-----------------------------HAEQEAALQAAIAQL 210 ACP CGP L H + A+A L Sbjct: 198 ACPVCGPTLSLFDASGTLLLGESVVEHNPVDGTSHAQPKTALSCAHTLSGDVVAEAVAFL 257 Query: 211 KMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAA 264 + G IVA+KG+GGFHLA DARN AV LR RK R AKP AVM+ + + Sbjct: 258 RRGMIVALKGLGGFHLAVDARNEAAVRRLRERKGREAKPFAVMIRDRSLVHGYCEVSETE 317 Query: 265 RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGN 324 L+ APIVL+ KK L IAP +GVMLP PL LL E LVMTS N Sbjct: 318 MAALSAAQAPIVLLKKKKSSNLAPSIAPGNERLGVMLPYTPLHTLLFDETLDILVMTSAN 377 Query: 325 LSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV-VRESG--EMLRRSRGYVPDA 381 S +P A NE+AL L+GIAD FL+HNR I + DDSV + SG LRRSRGYVP Sbjct: 378 FSEEPIASENEEALLRLKGIADAFLVHNRPIYLKCDDSVTIALSGTLRQLRRSRGYVPAP 437 Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 + L ++ P VL G +LKNT +++G A++SQH+GD+ + + + + +Q++ Sbjct: 438 IYLR---EDGPVVLAAGGELKNTITILKGSHALMSQHIGDMKNYEAYRHFVQVVAHLQHL 494 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 + P+ +VHD HP Y+++QWA N+P V HHHAH +CLAE++ G I L L Sbjct: 495 FQAVPKLLVHDLHPAYMTTQWAMMQNIPLLGVQHHHAHLVSCLAENREE---GPAIGLIL 551 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG G G +G +WGGE L + L + LPGG+ A PWR L R P+ Sbjct: 552 DGTGYGTDGTIWGGEVLIGDAAGAARFASLELMPLPGGEAAVMHPWRAALGYLHRSCPDL 611 Query: 562 QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 + ++ ++ + +++ + SSCGR FDAVAA +SYEGEAA A Sbjct: 612 PDLP---FMKGRSIEPVLELLQKRVTIVETSSCGRLFDAVAALCALRGE-ISYEGEAAIA 667 Query: 622 LEALAASCHG-VTHPVTMPRVD-------------------------------------- 642 L A G + + Sbjct: 668 LMHEAGGSMGSKSFRYGLHYEQKPALAPVQSAGGTIGTNDIPAVTERLINTPRGTIANKH 727 Query: 643 ---------NQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 + ++ + L + + FH L F ++ + + GIT Sbjct: 728 DLLHEEKGRWTMLVSPIIRDVVTALQTGMAAGEISRRFHRTLVNCFYEIIGKASKATGIT 787 Query: 691 TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 T+ SGGV N LL L L A + +L +P+ DGGLSLGQ +I +L G Q Sbjct: 788 TVALSGGVFQNALLFEALVTELQRAGYKVLTQALVPSNDGGLSLGQALIGRT-YLNGNYQ 846 >UniRef50_C5RLE4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLE4_CLOCL Length = 773 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 269/778 (34%), Positives = 393/778 (50%), Gaps = 44/778 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 + RI+G VQGVGFRPF+ ++ + L G V ND +GV V ++ D ++F+ + Sbjct: 1 MKTCRYRIKGIVQGVGFRPFIHKITAKYELKGWVLNDSEGVVVEVQGKQRDIDSFIDDVK 60 Query: 63 QHCPPLARIDSVEREPFIWSQL-PTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 CPP+A+I + P SQ +F I++S NT I PDA C C+ E+ Sbjct: 61 ISCPPMAKIQDIIEIPVSKSQKRYADFIIKRSIQRRETNTFIPPDAYVCKECVDELLDKN 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRY+YPFINCT+CGPR+TII+ MPYDR T M F +CP C KEY+D RR+HAQP A Sbjct: 121 NRRYKYPFINCTNCGPRYTIIKEMPYDRISTTMKEFKMCPDCQKEYKDINSRRYHAQPNA 180 Query: 181 CPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP CGP LE + + +L GKI AIK IGGFHLA +A + V L Sbjct: 181 CPICGPQLELRDKNGEVVIATDVISFSKERLLEGKIFAIKSIGGFHLAANALDEKIVKKL 240 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R K R +KP A+M+ + + ++LL PIVL+ KK L D IAP+ Sbjct: 241 RLLKKRDSKPFAIMVNDTKMAEKYMEVSEEEKKLLNGVERPIVLL-KKKPHMLPDAIAPN 299 Query: 294 LNEVGVMLPANPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 GVMLP+ PL +LLL++ + L+MTSGN+SG+P N +A+ L IAD F+++N Sbjct: 300 NPSYGVMLPSAPLHYLLLEDGRLEALIMTSGNISGEPIVYENNEAIKQLNSIADYFILNN 359 Query: 353 RDIVQRMDDSVVRESG---------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 RDI R+DDS+VR S ++RR+RG+ P + + ++ LG++LK Sbjct: 360 RDIYTRVDDSIVRYSNSNSLRKPITSIIRRARGFAPYPIIIDKKVT---SIVALGSELKA 416 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 T + +SQH+GD+ +D I A+ ++ + P+ +V D HP + SS A Sbjct: 417 TVATSKCNTVFISQHIGDVKNDKIFESLFNAVEHLKKLLTIEPKVLVCDLHPNFKSSLKA 476 Query: 464 REMN-LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 + LP V HHHAH AAC+AE+ D I + DG G G +G +WGGE L +Y Sbjct: 477 MSQSELPVIKVQHHHAHMAACMAENNLEEDT---IGIIFDGTGYGHDGTIWGGEFLVGDY 533 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNWSVLA 579 + +G L + L GGD A K+P+R L R E + +Q + Sbjct: 534 NSVKRVGSLDSFYLLGGDKAIKEPFRVALDILYRTYGEGMLQLGLPFLSKYTEQEMKIYY 593 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + E+ INA +S GR FD V+ + ++ YEG+AA LE L + Sbjct: 594 KMSEKKINAFETTSMGRLFDGVSVLINLC-TSIEYEGQAAIELEGLLNRDFTLDKSFNYE 652 Query: 640 RVD----NQLDLATFWQQWL----NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 + D ++ + + ++ + FH + ++ I Sbjct: 653 ILQRDDRYIFDYRAMIREIVNLVSEKEYDISNLSRRFHSTIISALVSITNRIRKDYKINN 712 Query: 692 LVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V SGGV N L L +F + + +P DGG+SLGQ ++A A + + Sbjct: 713 VVLSGGVFMNEYLLVNSIIALENLNFNVFYHSKVPTNDGGISLGQVMVADAIYNKTKK 770 >UniRef50_B6A573 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A573_RHILW Length = 784 Score = 924 bits (2390), Expect = 0.0, Method: Composition-based stats. Identities = 293/774 (37%), Positives = 405/774 (52%), Gaps = 43/774 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 +++R++G VQGVGFRPFV+ LA + L G V ND GV + ++ E F+ L Sbjct: 11 ALEVRVQGIVQGVGFRPFVYTLANRYELSGWVANDTTGVTISVQGPHASVEAFMEDLTCK 70 Query: 65 CPPLARIDSVEREPFIWSQLPTE--FTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGE 121 P ARIDSV+ P FTIRQS+ G NT I PD CP C AE+ P Sbjct: 71 LPTAARIDSVDVRSRQACIPPASPHFTIRQSSVTGQKNTLITPDLHVCPDCEAELFDPNN 130 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFINCT+CGPR++II PYDRP T M+ F +CPAC EYR+PLDRR+HAQP+AC Sbjct: 131 RRYRYPFINCTNCGPRYSIILDTPYDRPNTTMSRFQMCPACLAEYRNPLDRRYHAQPIAC 190 Query: 182 PECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 +CGP L G+ E A++AA +L G+I+A+KGIGGFHL D RN AVATLR Sbjct: 191 GDCGPTLRLTDTAGQPIPAEDAIEAARDRLADGQILAVKGIGGFHLIVDPRNPAAVATLR 250 Query: 241 ARKHRPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +RK R KPLA+M ++ + L + PIVL+DK L D++ Sbjct: 251 SRKRRYKKPLALMCRDSETASKFVSMGAFEKATLESAPRPIVLLDKLAPNPLAPDVSAGT 310 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + G+ML P+ HLLL L++TS NLS P N++A+ +L IAD FL+H+RD Sbjct: 311 MQHGMMLAYTPIHHLLLDGRFDALIVTSANLSDDPIEFRNDEAIENLSAIADAFLVHDRD 370 Query: 355 IVQRMDDSVVRE--------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 I R+DDSV+ +RR+RGY PD + LP +++PP+L LGA+LKNT C Sbjct: 371 IHARVDDSVLLCWTSDHTGPKTMPVRRARGYAPDFVPLP---QSLPPILALGAELKNTIC 427 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 + RG QA LS H+GDL + + + + + TP+ +V D HP ++S+++A Sbjct: 428 VNRGNQAFLSPHVGDLKRGKVLTAFHQTIAETVRQHGVTPELMVCDLHPQFLSTEYANSQ 487 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +LP V HHHAH AA + E+ I + DG G+GE+G WGGE +Y Sbjct: 488 SDLPILQVQHHHAHMAAVMGENGL--CDRPTIGVVFDGFGLGEDGNNWGGEFFVGSYASV 545 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAI 582 + +G LPGGD A ++ R + E + + ++ +L I Sbjct: 546 QRVGHFSNFKLPGGDRATREIDRIAIGFLFDLYGENAFNLDLPVMRTRPEEELRILQTMI 605 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC---HGVTHPVTMP 639 R + PL SS GR FDAVAA G + YE +AA LEALA PV + Sbjct: 606 GRSVRTPLTSSVGRLFDAVAALTGVRSE-IQYEAQAAIELEALAGRGGFRRDACLPVVLR 664 Query: 640 RVDNQ---LDLATFWQQWLNWQA----PVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 +D + + + + FH + + GI+ + Sbjct: 665 SDSQGRILVDTHALMAEIAQLAVLPVKSLQEISHRFHATVVLSICEVCGRLRDRFGISNV 724 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 V SGGV NR + ++ LA F + + L GDGG+S GQ ++ L Sbjct: 725 VLSGGVFLNRFILSQTTDELARRGFDVFSHRQLSPGDGGISYGQLLVGGYSLLD 778 >UniRef50_A5E9B2 Carbamoyl phosphate phosphatase, (NiFe) Hydrogenase maturation protein n=12 Tax=Bacteria RepID=A5E9B2_BRASB Length = 824 Score = 924 bits (2388), Expect = 0.0, Method: Composition-based stats. Identities = 318/794 (40%), Positives = 441/794 (55%), Gaps = 50/794 (6%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 VQ+R+RG+VQGVGFRP VW+ A+++ L G+V NDG+GV +R R D ET + Sbjct: 14 NAAALESVQIRVRGRVQGVGFRPTVWRHAREVGLDGEVLNDGEGVLIRARGQGKDIETLV 73 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 +L P LA I+++E EPF P F I +S T+I PDAA CPAC AE+ Sbjct: 74 RRLRDEAPLLAAIEAIEVEPFTGRLAP-GFRIIESNRSEARTEISPDAAICPACAAEVLD 132 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P ERR+RY F NCTHCGPRFTIIR++PYDR T MAAFP+C C EY DP +RRFHA+P Sbjct: 133 PFERRFRYAFTNCTHCGPRFTIIRSIPYDRSATTMAAFPVCAECAAEYGDPANRRFHAEP 192 Query: 179 VACPECGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 +AC CGP + V A + AA++ ++ G+IVA+K +GG+ LACDA Sbjct: 193 IACHACGPKAQLVRFDGRALTYEQHSMFDDVDAAMSLIQKGEIVAVKALGGYQLACDATR 252 Query: 233 SNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPEL 286 + V LR K R KP A+M D + + L +PAAPIVL+D L Sbjct: 253 LDTVERLRLLKRREVKPFALMARDLDVIRRFCAVSPDEEEALCSPAAPIVLLDAAGPERL 312 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 + +AP + +G MLP+ PL L+ + + P++MTSGNLS +P AI + +A L I Sbjct: 313 PEAVAPGMRMLGFMLPSTPLHVLMFRRMPRPVIMTSGNLSDEPQAIGDAEAARKLGTITP 372 Query: 347 GFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 L+H+R+I R+DDSV+R +LRR+RGY P +++LP GF++ P +L G ++K Sbjct: 373 YALVHDREIANRVDDSVMRVMDGRMRLLRRARGYAPASISLPKGFEDSPDILAYGPEMKA 432 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 TFCLV+ +AVLSQH GDL D +R+ L L ++++ PQ + D HP Y+S++ A Sbjct: 433 TFCLVKEGRAVLSQHQGDLQDAATWDDYRKNLALFRDLFAHDPQALACDMHPEYLSAKLA 492 Query: 464 REM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 R+ +L V HHHAH AACL E+ LD V+ + LDG+G G + +WGGE L Sbjct: 493 RKRASEDSLALIEVQHHHAHIAACLTENARALDAPRVLGIALDGLGYGTDDTIWGGEFLL 552 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQ 573 +YR + +G VA+ GG A+++PWRNL A + ++ + + Sbjct: 553 CDYRGFQRVGTFRPVAMVGGAAASREPWRNLYAHLTAQMGWAAFAMNFRQLPLFERLAAK 612 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA------LAA 627 +VL I IN+PLASSCGR FDAVAAAL +YEGEAA LEA LA Sbjct: 613 PRAVLDTMIHDHINSPLASSCGRLFDAVAAALDVCFERQAYEGEAAARLEAIACPKTLAE 672 Query: 628 SCHGVTHPVTMPRVDNQ----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALM 680 + +P+ +P + ++ W L P A FH ALA+ + Sbjct: 673 EDDSLCYPMPIPVLKGSGLPYIEPLAMWNAILGDLILGTPQPIIAARFHKALARSIVTMA 732 Query: 681 REQATMRG------ITTLVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSL 732 + A T+ SGG NR+L + L + F +L +PA DGG++L Sbjct: 733 IQLARRDDEDAQPRFDTVALSGGCFQNRILLEQTVRRLEEKKFKVLTHAKVPANDGGVAL 792 Query: 733 GQGVIAAARWLAGE 746 GQ IAAA + E Sbjct: 793 GQATIAAAHLIDAE 806 >UniRef50_Q97KV6 Hydrogenase maturation factor (HypF) n=1 Tax=Clostridium acetobutylicum RepID=Q97KV6_CLOAB Length = 762 Score = 923 bits (2386), Expect = 0.0, Method: Composition-based stats. Identities = 257/758 (33%), Positives = 381/758 (50%), Gaps = 35/758 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQ 63 + L+I G VQGVGFRPFV++ A L L G V N+ GV + + + F+ +L Sbjct: 3 KRLLLKIEGIVQGVGFRPFVYRQASLLGLKGWVSNNSAGVYIDVEGESSNLYEFIDKLKY 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGER 122 P L RI+++ E F I++S T I PD C C+ ++ P + Sbjct: 63 DKPFLCRIENIAIEEKTAVN-YRSFKIKRSEDKYNKTTLISPDIGICEKCIEDITNPSSK 121 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY+YPF +CT+CGPRF+I++A+PYDR T M F LC ACDKEY D +RRF+A+ +C Sbjct: 122 RYKYPFASCTNCGPRFSILKAIPYDRKNTTMNKFKLCSACDKEYNDYNNRRFYAETNSCK 181 Query: 183 ECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGPH+ +H E + L +LK GKI AIKG+GGF L CDA N A+ LR Sbjct: 182 ICGPHIWIENHNGVKIEVDDELNWTRKKLKEGKIFAIKGLGGFQLVCDAENEEAIKKLRQ 241 Query: 242 RKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 +K+R KP AVM+ + +LL + PIV++++ ++ IAP Sbjct: 242 KKNRQHKPFAVMVKDIETAKKYCSVNYKEEKLLKSKVKPIVILNRSNYNKIPKVIAPYQK 301 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVMLP PL +LL + L+MTS N G P NE A+ L IAD FL HNRDI Sbjct: 302 TLGVMLPYTPLHYLLFSDDIEVLIMTSANAHGLPLEYKNESAIDKLGNIADYFLQHNRDI 361 Query: 356 VQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 +DDS+VR ++RR+RGY P+ + NV +L G+++KNTFC+ + Sbjct: 362 NVPIDDSIVRVVNGQECVIRRARGYTPNPIKSD----NVREILACGSNMKNTFCIAKNNF 417 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQT 472 LSQ+ GDL + ++ +R + I+ FTP Y+ D HP Y+S + LP Sbjct: 418 MFLSQYNGDLENVETIDRYINNIRHFEKIFKFTPGYIACDMHPNYLSIIYDNYSKLPKIE 477 Query: 473 VLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 V HHHAH +CL E++ G VI + DG G G + +WGGE + ++ L L Sbjct: 478 VQHHHAHIVSCLTENKVK---GKVIGIAYDGTGYGTDKKVWGGEFFICDTKKFIRLAHLK 534 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQQNWSVLARAIERGIN 587 V +PG ++A ++ WR +A E + + L I+ IN Sbjct: 535 YVKMPGAEMAIRENWRMAVAYIYSVFESGKYNEKHLLKTIMKLYGEKAIKLIDIIKANIN 594 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ--L 645 P SS GR FDA A+ +G ++YEG+AA LEA+ + + D+ + Sbjct: 595 CPETSSMGRLFDAAASLIGVRD-NITYEGQAASELEAVIELKCKQYYEYDIRFKDDNYII 653 Query: 646 DLATFWQQWLNWQAP---VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 + + + + + + + FH+ + + + + I + SGGV N Sbjct: 654 EGDKVIKGIIQDKISGVTMGEMSSKFHNTVVEFSKDVCKLLRKKTAINQVALSGGVFQNS 713 Query: 703 LLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIA 738 L L L F + + +P DGG++LGQ ++A Sbjct: 714 YLLKNLVDSLKKEAFIVYTNKEIPTNDGGIALGQIIVA 751 >UniRef50_A1SU85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU85_PSYIN Length = 762 Score = 920 bits (2380), Expect = 0.0, Method: Composition-based stats. Identities = 271/770 (35%), Positives = 392/770 (50%), Gaps = 43/770 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLY 62 Q+ ++G+VQGVGFRPFV A LNL G V N V + ++ +P + FL QL Sbjct: 2 QQRYQISVQGRVQGVGFRPFVAVTAANLNLTGWVRNIRQSVLIEIQGEPFETQKFLQQLQ 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGE 121 P LA+I+ + + T F I +S+G I PD C C E+ Sbjct: 62 SKAPALAKIEQLNHQQIDN-NDQTGFHILESSGKNEGVVSISPDIGICEHCQKELFYEEN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRYRYPFI+CT CGPR++I++ +P+DR T + AFP+C C EY++ DRRFHAQ + C Sbjct: 121 RRYRYPFISCTQCGPRYSILQKLPFDRCHTTLNAFPMCEDCLAEYKNLKDRRFHAQGINC 180 Query: 182 PECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 +CGP + +++H AE+EAAL AI L+ GKI+A+KG+ GFH+ DA N AV L Sbjct: 181 AKCGPQVSFINHKGERIAEKEAALTLAINALQAGKILAVKGLTGFHIMVDACNHQAVLRL 240 Query: 240 RARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLV-DKKYVPELCDDIAP 292 RARK RP KP A+M P + + + LL + APIVL+ +K L IAP Sbjct: 241 RARKQRPEKPFALMYPQLSMVKSDCLLGEQEKLLLCSAIAPIVLLENKHSNLSLSPAIAP 300 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +GVML PL L+ + + PLV+TS N SG+P NEQAL L + DGF++H+ Sbjct: 301 NNPYLGVMLAYTPLHQLICRAINKPLVVTSANRSGEPVCCDNEQALEQLSQLVDGFVMHD 360 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I Q +DDS+V+ +LRR+RGYVPD L L + P ++ LG LKN+ + + Sbjct: 361 REIYQGLDDSIVKFVNHEPMLLRRARGYVPDYLTLDTEY---PSIVALGGQLKNSIAISK 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 G++ LSQ++G L + + + ++M + T V D HP YV++Q A++ +LP Sbjct: 418 GKRLYLSQYIGSLDNIASVNRHQRTQKIMSRLMGVTADCVACDLHPDYVTTQLAKKQHLP 477 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 + HH AH A + EHQ A+ DG G GE+G LWGGE + V + + + Sbjct: 478 IISTQHHLAHLYAAMLEHQII---DQAFAVVWDGNGYGEDGTLWGGEFIAVTADKPQRVA 534 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW----QNYSETASVQQQNWSVLARAIERG 585 LPGG A K+P R +A + + + + L + I Sbjct: 535 TFLPFKLPGGAAAIKEPRRVAVALLYEVYGKKIASNEVLKSLSPFELSTIKQLLKMISNN 594 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV---THPVTMPRVD 642 IN+PL SS GR FD +++ L + S+EGEAA LE A + PV Sbjct: 595 INSPLTSSAGRLFDGISSLLNLGQIS-SFEGEAAMRLEFAAKTSKDKGSYPVPVDFAVTP 653 Query: 643 NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 N +D + A FH++ A + + G+T ++ +GG Sbjct: 654 NIIDWRPMLAAIITDIGNHVSSAIIARRFHNSAAIIILKIAQH----YGVTQILLTGGCF 709 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ---GVIAAARWLA 744 N LL L +L+ + LPA D L +GQ A +L Sbjct: 710 QNSLLIEITFALLQEQGIAVLWHKKLPANDASLCVGQIMGAYKARHSYLN 759 >UniRef50_C1TMC9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Synergistaceae RepID=C1TMC9_9BACT Length = 753 Score = 919 bits (2377), Expect = 0.0, Method: Composition-based stats. Identities = 290/765 (37%), Positives = 410/765 (53%), Gaps = 37/765 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 M + ++ + G VQGVGFRPF +LA L L G V N DGV + LR + + Sbjct: 1 MTEK-----EILVTGVVQGVGFRPFCAKLASSLGLGGSVINSSDGVVIVLRGTERSIDNY 55 Query: 58 LVQLYQHCPPLARIDSVER--EPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLA 114 + L P A I S+ E LP F I +S I PD TC CLA Sbjct: 56 IKNLKDTKPDPADIHSITIISERKTDGDLPGAFVIGKSRRTERQRVLIPPDIGTCDRCLA 115 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 EM P +RRYRYPFINCT CGPRF+I+ +PYDRP T M+ FP+C C+ EY D +RR+ Sbjct: 116 EMRDPSDRRYRYPFINCTDCGPRFSIVSGLPYDRPKTTMSIFPMCDRCNGEYTDQENRRY 175 Query: 175 HAQPVACPECGPHLEWVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 HAQP AC +CGP + + + +E + LK GK+VAIKG+GGFHLACD Sbjct: 176 HAQPNACADCGPSVWFQTELGEPYLREDGIGRCREYLKAGKVVAIKGLGGFHLACDPFED 235 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 V+TLR RK RP KPLA+M + + + +LL + PIVL +KK + Sbjct: 236 TPVSTLRHRKGRPDKPLAIMAESLESAREIALISEEEARLLKSSRRPIVLCEKK-TGSVA 294 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 + +AP N VG+MLP PL HL+L+ + LVMTS N + P NE+AL+ L +ADG Sbjct: 295 ESVAPGQNSVGIMLPYTPLHHLILEGM-RALVMTSANPTDSPLISDNEEALSRLAHVADG 353 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 FL+HNRDI ++DDS+V SG+ MLRR RGYVP+ + L ++P +L GA++K+T Sbjct: 354 FLMHNRDICMKVDDSLVALSGDRTVMLRRGRGYVPNPIDLSI---SMPHILAAGAEMKST 410 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 F L + SQ+LGD +R+ L +Y+ P+ + +DAHP Y+S+Q A Sbjct: 411 FSLTQEGLIFPSQYLGDAKQMDTLGYYRQTLDHFTELYNIRPKALAYDAHPLYLSTQTAL 470 Query: 465 EMNLPT---QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 + V HHHAH AACLAE+ I + +DG G G +G +WGGE L + Sbjct: 471 KALGEVERSMAVQHHHAHLAACLAEYDI---NEPTIGVIMDGTGYGSDGTIWGGEFLLGD 527 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARA 581 + LG LPGGD + +PWR L+ + E + E + + Q+ Sbjct: 528 WSGYRRLGHFKTAGLPGGDRSVLEPWRYSLSLLTEALGEEEAIKEASRIWQERSEKAKII 587 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRV 641 ++ ++PL SSCGR FD V+A LG +SY+G+AA LEA ++ + + + Sbjct: 588 VKTMNSSPLTSSCGRLFDGVSAILG-GRDRVSYDGQAAMELEARSSYTDEIPVDMGIWND 646 Query: 642 DN--QLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 ++ LD F + + + ++Q AFH +LA+ + + A G+ + SGGV Sbjct: 647 EDGIILDWRPFIRWLVEEKPTLDQGGSAFHASLAKSISEICTNIAKDTGVKKVALSGGVW 706 Query: 700 HNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 NR+L + L F++L + L D +S+GQ IA RW Sbjct: 707 QNRMLLRQTVVRLEGRGFSVLTHRRLSPNDESVSVGQAAIAGWRW 751 >UniRef50_B9L1W3 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B9L1W3_THERP Length = 758 Score = 919 bits (2376), Expect = 0.0, Method: Composition-based stats. Identities = 297/750 (39%), Positives = 408/750 (54%), Gaps = 36/750 (4%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 +R+ G VQGVGFRPFV++LA +L L G V N GVE+ + TFL +L + Sbjct: 12 AWSIRVTGVVQGVGFRPFVYRLATRLGLGGWVLNTEQGVEIVVEGPEPALATFLSELESN 71 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERR 123 PP ARI S+ + +FTIR+S G T++ PD ATC ACL E+ P +RR Sbjct: 72 PPPAARIASLSVQQTRP-IGFAQFTIRESAQGDRPTTRVSPDLATCDACLRELFDPADRR 130 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YP+INCT+CGPR++II ++PYDRP T M + LCP CD+EY DP DRRFHAQP+ACP Sbjct: 131 FHYPYINCTNCGPRYSIILSLPYDRPRTTMKDWSLCPDCDREYHDPGDRRFHAQPIACPL 190 Query: 184 CGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + + A E A++ A + L GKI+A+KGIGG+HLACDARN+ AV LR Sbjct: 191 CGPQYQLCTATGQLVARGEDAVRLAASWLVAGKILAVKGIGGYHLACDARNAAAVWALRE 250 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK R KP A+M+ D L DAA LL +PA PI+L+ + +AP+ Sbjct: 251 RKFRKEKPFALMVRDLDTAAQLVELDDAASALLGSPARPILLLPARIE---LPGVAPENR 307 Query: 296 EVGVMLPANPLQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 + G+MLP PL +LL P LVMTS N S +P A ++ A A L GIAD FL+ R Sbjct: 308 DFGIMLPYAPLHYLLF-AFGAPAVLVMTSANRSDEPIAFCDDDAFARLSGIADAFLVGER 366 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I +R+DDSV+R ++RR+RG P +A P P+L +GADLKNT LV Sbjct: 367 PIARRIDDSVIRHGPSGSILVRRARGLAPAVVATLP---TTRPILAVGADLKNTVTLVVA 423 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQWAREMNL 468 QA +SQH+GDL + + +R + +Y+ +VHDAHP YVS++ A+E+ Sbjct: 424 GQAFVSQHIGDLEHWPVVEAFSTTIRDLCAMYEVNLDEALIVHDAHPEYVSTRLAQELPG 483 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY-RECEH 527 V HH AH A+ LAEH+ D V+ DG G G++ ++WGGE + Sbjct: 484 THVAVQHHRAHIASVLAEHECWDDS--VVGFAFDGTGYGDDSSIWGGEVFVGSLVGGLRR 541 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L V LPGGD AA+ P + +PE + + + + + R + Sbjct: 542 VASLRPVLLPGGDAAARWPVQAAAGFL-AMLPELPDLHASPFAFPKRYDEACTVLRRRVR 600 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDL 647 +S GR FD VAA G +++EG+AA LE LA V P P V+++LD Sbjct: 601 CHPTTSMGRLFDTVAALCGFT-RPITFEGQAAIWLEHLARQAGEVA-PYPFPFVNHELDF 658 Query: 648 ATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 + + A AFH+A+A ++ GI +V SGGV N LL Sbjct: 659 RPLLAAVIRDRQRGRDIAAIARAFHEAVAHAICSVAAYCREAYGIRHVVLSGGVFQNMLL 718 Query: 705 RARLAHYLADFTLLFPQSLPAGDGGLSLGQ 734 R+ L T+ + +P DGG+SLGQ Sbjct: 719 LTRVQQLLGQTTVWVNRMVPPNDGGISLGQ 748 >UniRef50_B0TVE0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TVE0_SHEHH Length = 795 Score = 919 bits (2375), Expect = 0.0, Method: Composition-based stats. Identities = 280/798 (35%), Positives = 389/798 (48%), Gaps = 65/798 (8%) Query: 1 MAKN-TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPET 56 M KN +QL+I G VQGVGFRPFV++LA +LNL G V N+ +GV + + + Sbjct: 1 MTKNLEKSRLQLKITGIVQGVGFRPFVYRLAHELNLTGTVLNNSEGVTIEAQGRPAELAL 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAE 115 F PPLARID++ P F+I S ++ + D TC C + Sbjct: 61 FEAAFSNQAPPLARIDNINVTPLPVIDDCDLFSIVHSEKESLAVVAVSSDKCTCEDCFKD 120 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 +N R +RYPF NCT+CGPR+++I A+PYDRP T MA F +CP C++ Y DP+DRR+H Sbjct: 121 INDINNRHFRYPFTNCTNCGPRYSLINALPYDRPNTAMADFDMCPDCERAYLDPMDRRYH 180 Query: 176 AQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQPV+CP+CGP L + S + +E AL+ AI L GKI+AIKGIGGFHL CDA N+ Sbjct: 181 AQPVSCPKCGPQLSFKSADLTLLSSKETALEDAINSLIEGKILAIKGIGGFHLVCDATNN 240 Query: 234 NAVATLRARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKY----V 283 +V LR RK+RPAKP AVM+ D Q+L++ PI L+ K Sbjct: 241 QSVELLRQRKNRPAKPFAVMVENIDAAKRLVTGNTAEWQVLSSAERPITLMRKIDAHDVE 300 Query: 284 PELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 P L D +AP ++ +G+ LP PL LLL ++ PLVMTS NLSG+P + L Sbjct: 301 PSLSDLVAPQIDRLGIFLPYTPLHQLLLNGVKRPLVMTSANLSGEPIITDSVAINCKLAN 360 Query: 344 IADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 + D L HNR I+ DDSVV+ ++LR +RGY P + + +L LGA Sbjct: 361 VIDNILDHNRPILNGCDDSVVQVINDKLQVLRLARGYAPLSFYSEQPLE--ESILALGAQ 418 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KN+ C LS H+GDL + + L +Y F +VHD+HP Y +S Sbjct: 419 QKNSICFGIEHNLFLSPHIGDLVSIEAEEYFHHTLNTFSRLYGFKASQLVHDSHPDYATS 478 Query: 461 QWAREMNL-PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 +WA + T +V HH+AH + +A ++ V+ + DG G+G++ LWGGE LR Sbjct: 479 RWALSQAINNTSSVQHHYAHVLSVMAANKITT---PVLGFSFDGTGLGDDDTLWGGELLR 535 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW----QNYSETASVQQQNW 575 + + + L L AL GG+ A KQP R LL+ L + ++ + Sbjct: 536 CDVHQYQRLSHLSTFALIGGEQAIKQPVRILLSILLEKHSPEVIYKLDIPALKALSPTMF 595 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH- 634 + L + + + SS GR FDAVA ALG T YEG+A +E A S + Sbjct: 596 TNLVKLWQTNT-SIKTSSIGRLFDAVAVALGMISDTQ-YEGQAGILIETAANSLSSASEL 653 Query: 635 ---------------------------PVTMPRVDNQLDLATFWQQWLN---WQAPVNQR 664 + + + Q D + Q + R Sbjct: 654 NHFDGQFKLQPLLCPAPETIAEHHEPIRFDIKQSNGQWDSSELLGQIVEQITLMPLTPLR 713 Query: 665 AWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQS 722 A A L+ E A T +V GGV NR L R L LL Sbjct: 714 AALIAKAFMDALCNLVCECAKDHLDTPIVLCGGVFQNRYLLERCEKQLNAQGNQLLSSNK 773 Query: 723 LPAGDGGLSLGQGVIAAA 740 +P D G++LGQ A Sbjct: 774 VPINDAGIALGQLWYAMH 791 >UniRef50_B5H2J5 Hydrogenase maturation protein HypF n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H2J5_STRCL Length = 771 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 282/774 (36%), Positives = 398/774 (51%), Gaps = 41/774 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + + + G VQGVGFRP V++LA Q L G V ND GV + + E F Sbjct: 3 MTSDAVRRT-VEVTGFVQGVGFRPHVYRLATQHLLGGWVRNDARGVTICVEGPREAADLF 61 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTE-FTIRQSTGGTMN-TQIVPDAATCPACLAE 115 L + P LAR+D+ + T FT+R ST + + PD+ C C E Sbjct: 62 GEALLKRLPGLARVDTCAVVAEEPVRDWTSSFTVRHSTAESGAGALVTPDSHVCADCARE 121 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + P +RR+RYP +NCT CGPR++IIR +PYDRP T MA F +CP C EY P DRRFH Sbjct: 122 LFDPADRRHRYPLLNCTDCGPRYSIIRGLPYDRPKTTMADFAMCPECRAEYESPADRRFH 181 Query: 176 AQPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 AQP AC CGP + + A + A L+ G I+A+K +GG+ L D R+ Sbjct: 182 AQPTACWSCGPQVRLLLPDGSDAGTADPVATAAGLLRDGHILAVKALGGYQLMADPRSPA 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCD 288 A A LRARK R +KP A+++ + L D R+LL +P PIVL+ + L Sbjct: 242 ATAELRARKERSSKPFALLVRDSATAAEYTVLDDRERRLLESPGRPIVLLRARPDSSLAP 301 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +AP +G+MLPA PLQHLLL L+ TS N +P A + E+AL L+G+AD F Sbjct: 302 GVAPGSATLGLMLPATPLQHLLLAAAGPVLIATSANAPDEPMARTEEEALRGLRGLADAF 361 Query: 349 LIHNRDIVQRMDDSVVRE-------SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 L+H+R+I R+DDS+ R +RR+RGY P VPPVL LGA+L Sbjct: 362 LVHDREIHMRVDDSIARVVHSTVEPKVTFVRRARGY---VPDPVPAPFPVPPVLALGAEL 418 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNT CL G+ +SQH+GDL G Q + + + +++++ TP+YV HD HP + S++ Sbjct: 419 KNTVCLGSGDNLYVSQHIGDLKSLGNQRFFADTIAHLRSVFGVTPRYVAHDLHPDFHSTR 478 Query: 462 WARE-MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 +A ++ V HHHAH A+C+A++ VI + DG G G +G +WGGE L Sbjct: 479 YAASCQDVRLVGVQHHHAHMASCMADNGLDR---PVIGVVFDGTGYGTDGTIWGGEFLIG 535 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN---YSETASVQQQNWSV 577 +YR E L LPGGD A ++P R + + V Sbjct: 536 DYRGFERKAHLARFRLPGGDKAVREPDRVAIGLLAQHFGADAATLPLDLLRRRDPFEVGV 595 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA--ASCHGVTHP 635 L + RG+NAP SS GR FDA +A LG + YEG+AA LE L P Sbjct: 596 LMKMATRGVNAPETSSMGRLFDACSALLGVC-GRVGYEGQAAIELEQLIAWDHTPVEPWP 654 Query: 636 VTMPRVDN--QLDLATFWQQWLNW----QAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 V + D+ +D + + ++ + + FH+++ + + + G+ Sbjct: 655 VRLREEDDRLVIDHGPWLEGMVSDLSGPGGSAARVSRTFHESVVRAVVEVCLRLSHSSGV 714 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 T V SGGV N+ L R+ L A + +P DGGLS+GQ ++AAAR Sbjct: 715 TDTVLSGGVFLNQHLLVRVEEELTRAGLGVYTHSRIPTNDGGLSVGQAMVAAAR 768 >UniRef50_C7N0Q1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0Q1_SLAHD Length = 785 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 287/780 (36%), Positives = 395/780 (50%), Gaps = 59/780 (7%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 + + + G VQGVGFRPFV++ A++ + G V N GV + + + +F+++L ++ Sbjct: 4 ALDIEVHGVVQGVGFRPFVYKAARRNLISGWVLNATSGVFIHAEGESDHVNSFVMELSEN 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPGER 122 P A + + + + T F IR S T + PD ATC C+AE+ P R Sbjct: 64 APAAANVKEILLKEVPL-EGFTTFEIRFSEEEDVPETTLVSPDLATCDDCVAELFDPANR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFINCT+CGPRFTII +PYDR T MA FP+CP C +EY DP DRRFHAQP AC Sbjct: 123 RYHYPFINCTNCGPRFTIINGLPYDRAATSMAGFPMCPDCAREYADPEDRRFHAQPDACF 182 Query: 183 ECGPHLEWVSHGEH--------AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 +CGPH+ W + G A +A ++ A L+ G+I+AIKG+GGFHLACDA N Sbjct: 183 DCGPHIYWRASGSDEREWGLDLASSDAIVERAAQCLRQGRILAIKGLGGFHLACDAANPE 242 Query: 235 AVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCD 288 A+A LR RK R K AVM+P D + A LLT PIVL+ K+ Sbjct: 243 ALAELRRRKRREGKAFAVMVPNLDAVRAVCHVSKAEEDLLTGSVRPIVLLKKRAEATFAP 302 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 + L E+G+MLP PLQHLLL LVMTSGNL +P +E+A A L GIAD F Sbjct: 303 GLCDKLPELGIMLPYTPLQHLLLAAFGGMLVMTSGNLHDEPIQTDDEEAFAKLGGIADAF 362 Query: 349 LIHNRDIVQRMDDSVVRE--------SGEMLRRSRGYVPDAL---ALPPGFKNVPPVLCL 397 + ++R IV R DDSVVR + +M+RR+RGY P + + + V Sbjct: 363 IGNDRPIVTRFDDSVVRVIQVGTAGDALQMVRRARGYAPMPVPLKRHAAEGQKLDTVFAA 422 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G + KNTFCL+RGE A +SQH+GD+ + W +A + ++ TP + +D HP Y Sbjct: 423 GPEQKNTFCLLRGEDAFVSQHIGDMENAETFDAWLDAKARFERLFQATPDRIAYDLHPEY 482 Query: 458 VSSQWAREMNLPTQ---TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWG 514 ++S+WA E V HHHAH + +AE+ VI + DG G G +G +WG Sbjct: 483 LASKWALEQAAAGAAAEPVQHHHAHIVSVMAENDLTDA---VIGVAFDGTGYGVDGRIWG 539 Query: 515 GECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF-VPEWQNYSETASVQQQ 573 GE + N ++ E V +PGG A K P R + + E Q Sbjct: 540 GEVMMANRQDFERFANFAYVPMPGGAAAVKHPDRMAYGFLWTYDLLEHPAAQPMLEAMGQ 599 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 + I+RG+N P+ SS GR FDA++A G L YEGEAA EA A + Sbjct: 600 QAELCGTMIDRGLNTPMTSSVGRMFDALSAICGVCTEPL-YEGEAAILFEA-AMNGVQTD 657 Query: 634 HPVTMPRVDNQ--------------LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGF 676 + V N D ++ L+ V + H+AL Sbjct: 658 EAYAIDVVKNTAGEGSTAHNTSVVLFDAEPLFRGVLDDLAAGVGVETISAKAHNALVAAV 717 Query: 677 AALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 + G++T+ +GGV NR L L A FT+ + LP DGG++ GQ Sbjct: 718 LQICLVANAAYGVSTVALAGGVFMNRYLIEHTTAALESAGFTIAINRELPPNDGGIAYGQ 777 >UniRef50_B5JEL9 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL9_9BACT Length = 774 Score = 917 bits (2370), Expect = 0.0, Method: Composition-based stats. Identities = 286/766 (37%), Positives = 405/766 (52%), Gaps = 43/766 (5%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLV 59 + +Q+ I G VQGVGFRP V++LA+ LNL G V N+ GV + + D E FL Sbjct: 9 QAKHKRLQVFIHGAVQGVGFRPHVYRLARDLNLVGWVINNSQGVRIEVEGLAFDLEQFLD 68 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNT 118 +L PPLA++ S+E ++F +R S G I+PD ATCP C AE+ Sbjct: 69 RLKSEKPPLAQVTSIESRYVKPV-GFSDFRVRHSDSNGEKTALILPDIATCPECQAELFD 127 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P +RRYRYPFINCT+CGPRF+I+ +PYDRP T M FPLCP C KEY P RRFHAQP Sbjct: 128 PKDRRYRYPFINCTNCGPRFSIVETLPYDRPNTTMKRFPLCPLCQKEYDAPEHRRFHAQP 187 Query: 179 VACPECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +AC CGP LE+ + G A + AL+ A + G ++A+KG+GGF L DARN++A+ Sbjct: 188 IACSTCGPTLEFWNKATGPCAHGDEALKMAEHLVSSGHVLALKGVGGFQLIVDARNADAI 247 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 A LR K R KPLA+M P L R+LL +PA+PIVL+ K+ D + Sbjct: 248 ARLRKCKGRGPKPLAIMCPDLGYTRSICHLSALERKLLLSPASPIVLLKKR--SRAFDAV 305 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP + + GVMLP +PL HLL+++L P+V TSGN S +P I NE+A+ L IAD FL+ Sbjct: 306 APGMRDYGVMLPCSPLHHLLMRDLGYPIVATSGNRSEEPICIENEEAIERLSDIADAFLM 365 Query: 351 HNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I + +DDS+ R ++LRR+RGY P + + +P + LGA LKN+ + Sbjct: 366 HDRPIARHVDDSIARVILGDVQILRRARGYAPLPINVDL---EIPSCIALGAHLKNSVAI 422 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 V + +SQH+G+L + R + +YD P +V HD HP YVS+ +AR Sbjct: 423 VAQNKIFISQHIGNLETAESYRAFETTARDLPILYDCQPTFVAHDKHPDYVSTFYARGTP 482 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 L +V HH AH +C+A++Q V+ ++ DG G G++ ++WGGE + Sbjct: 483 LERISVQHHLAHVYSCMADNQLQ---APVLGISWDGTGYGDDKSVWGGESFLIEDSAERR 539 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFV----PEWQNYSETASVQQQNWSVLARAIE 583 + + L GGD+AA QP R LA ++ + + +L + Sbjct: 540 VSSITQFPLLGGDIAALQPRRVALALLQASFPKSLGDYAKLPALRAFTASEYRILEQITL 599 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD- 642 + N PL SS GR FD V++ LG +EG+AA LE LAA+ P D Sbjct: 600 KHRN-PLTSSIGRLFDGVSSILGICQTNR-FEGQAAALLEFLAATAPKNQLPYPYILHDQ 657 Query: 643 ---NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 D + + A FH LA A + A+ G+ ++ +G Sbjct: 658 GGFTTFDWKPMIRAIVEEYTNGVNPPIIAARFHQTLA----AYAVDIASRHGVPSIALTG 713 Query: 697 GVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 G + NRLL +A L F + +P DGG+ +GQ Sbjct: 714 GCMQNRLLCELIAETLKENGFNPFIHRRVPPNDGGICVGQAYAVGR 759 >UniRef50_B8CMI9 Hydrogenase maturation protein HypF n=2 Tax=Shewanella RepID=B8CMI9_SHEPW Length = 798 Score = 915 bits (2366), Expect = 0.0, Method: Composition-based stats. Identities = 285/803 (35%), Positives = 393/803 (48%), Gaps = 67/803 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETF 57 M V+++I G VQGVGFRPFV++LA L L G V N+ +GV + + E F Sbjct: 1 MT-MALTRVEIKITGIVQGVGFRPFVYRLAHDLALSGSVLNNSEGVTIEAQASEYTIEQF 59 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEM 116 L PPLARIDS E + + +F I S + D TC C A++ Sbjct: 60 -KLLLTSPPPLARIDSFETKQIPVEKAQEQFCIIHSQNNADAIVAVSADKCTCADCFADI 118 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 + P R +RYPF NCT+CGPR+TII +PYDR T MA F +C C+KEY+DPL+RR+HA Sbjct: 119 SNPKSRYFRYPFTNCTNCGPRYTIINNLPYDRVNTSMATFVMCTTCEKEYQDPLNRRYHA 178 Query: 177 QPVACPECGPHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 QPV+CP CGP L + + + L AI +K GKI+AIKG+GGFHL CDA N + Sbjct: 179 QPVSCPNCGPQLSFRNLNLSITSSESDPLVQAIEAIKSGKILAIKGLGGFHLVCDATNHD 238 Query: 235 AVATLRARKHRPAKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPEL- 286 +V LR RK+RPAKPLA+M+ + D Q L + PI ++ K+ PEL Sbjct: 239 SVKALRQRKNRPAKPLAIMVEN-SQVAKKLVTGNDTEWQTLNSNERPITVMQKRQKPELE 297 Query: 287 -CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 IAPD++ +GV LP PL +L++ + PLVMTS NLSG+P ++E ++ L I Sbjct: 298 ISSIIAPDIDRLGVFLPYTPLHQMLMERVARPLVMTSANLSGEPIITASEDIVSKLGHIV 357 Query: 346 DGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L HNR I+ DDSVV+ ++LR +RGY P ++ P P L LGA K Sbjct: 358 DHILDHNRPILNGCDDSVVQVINNRLQILRLARGYAPLSIYSPQ--HIEKPTLGLGAQQK 415 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NT C G LS H+GDL + + + L +Y F + +VHD HP Y +SQW Sbjct: 416 NTLCFAFGHNLFLSPHIGDLVSVEAERYFHDTLSTFSRLYHFEAKLLVHDRHPNYFTSQW 475 Query: 463 AREMNLPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 A + V HH+AH + LAE++ V+A T DG G+GE+ LWGGE L + Sbjct: 476 AADEEEAFKTEVQHHYAHVLSVLAENK---TTEQVLAFTFDGTGLGEDHTLWGGEVLLAD 532 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSV 577 + E + L L GG+ A KQP R L++ L + ++ + + S Sbjct: 533 AYKFERIAHLTPFKLIGGEQAIKQPVRLLISILLEKYSPEEIAAMKLPAIDNLSRTHLSN 592 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH------- 630 L + + SS GR FD VA L + YEG+A LE A S Sbjct: 593 LCKVWHKTSPNSQTSSIGRLFDVVAVLLNLVDI-IQYEGQAGILLETAANSVIPSDDMNN 651 Query: 631 ---GVTHPVTMPRVDNQLDLA------------TFWQQWLNW-------QAPVNQRAWAF 668 + ++ Q D +Q L VN A AF Sbjct: 652 YHGKAKEDLKANNIEIQCDFKLHLTERNQWQPIELIEQILTEIHKMPLTTDRVNFIARAF 711 Query: 669 HDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAG 726 D +A + T +V +GGV NR L R L ++ P+ +P Sbjct: 712 MDCIANMVCDIAL----GFKSTPIVLTGGVFQNRYLLERCERQLTAQANKIMQPKFVPIN 767 Query: 727 DGGLSLGQGVIAAARWLAGEVQN 749 D G++LGQ A + + N Sbjct: 768 DAGIALGQAWFAINNNIETTIDN 790 >UniRef50_Q65SA7 HypF protein n=11 Tax=Gammaproteobacteria RepID=Q65SA7_MANSM Length = 770 Score = 915 bits (2366), Expect = 0.0, Method: Composition-based stats. Identities = 404/773 (52%), Positives = 494/773 (63%), Gaps = 40/773 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED----PET 56 M ++LRI+GKVQGVGFRPFVW LA Q L GDV NDG GV +R E + Sbjct: 1 MNTEKQSVIELRIKGKVQGVGFRPFVWLLANQYGLKGDVNNDGQGVLIRFIEPDCASLQQ 60 Query: 57 FLVQLYQHCPPLARIDSVEREPF--IWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLA 114 FL L PPLA+I ++ ++FTIR+S ++TQIVPDAATCPACL Sbjct: 61 FLRDLQNKLPPLAQITEIQETTKIGENLPHFSDFTIRESENNAVDTQIVPDAATCPACLK 120 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E+ P RR+ YPF NCTHCGPRFTII+++PYDRP T MA FP CP C++EY++P DRRF Sbjct: 121 ELFAPRNRRFHYPFTNCTHCGPRFTIIKSIPYDRPNTSMANFPFCPECEREYKNPADRRF 180 Query: 175 HAQPVACPECGPHLEWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 HAQP ACP CGPH+ + H + A+ EAAL + L GKI+AIKGIGGFHLACDA N Sbjct: 181 HAQPNACPVCGPHIWLQNQHTKIADHEAALIQTLHLLNEGKIIAIKGIGGFHLACDATNR 240 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD---GLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 V LR+RK RP KPLA+M+P L A +LLT+ AAPIVL+ K VP + + I Sbjct: 241 QTVQLLRSRKRRPTKPLAIMVPDLQFLTALSRAETKLLTSSAAPIVLLSKHKVPAVDELI 300 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP LNE+GVMLP+NPLQHLLL+ + PLVMTS N SG+PP + NE A+ LQ +AD +L Sbjct: 301 APHLNEIGVMLPSNPLQHLLLKAINKPLVMTSANPSGQPPVLDNESAVKFLQNLADFYLC 360 Query: 351 HNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNRDI+QR DDS+VR + E LRR+RGYVPD + N +L LG+DLKNTFCL Sbjct: 361 HNRDILQRADDSLVRIAFDGLETLRRARGYVPDEI--SLNISNNKNILALGSDLKNTFCL 418 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWA 463 ++ +AV+SQH+GD +D+ ++ Q E L L Q+IY F + D+H GY SS Q A Sbjct: 419 LKRNKAVVSQHIGDTADEKVRSQLEENLALFQHIYQFKADLIAVDSHTGYFSSATGRQIA 478 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 + +P +LHHHAH A +AEH VI + LDGIGMGEN LWGGECL +N Sbjct: 479 QCQQIPVMEILHHHAHIRAVMAEHNC---NEKVIGIALDGIGMGENQQLWGGECLLINRT 535 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIE 583 E +HLGGLPAVALPGGDLAA QPWRN LA +FV WQ + S ++ NW L+RAIE Sbjct: 536 EVKHLGGLPAVALPGGDLAATQPWRNWLAHIHQFVENWQELAA-KSCEKYNWQSLSRAIE 594 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-------------- 629 + IN P SS GR FDAVA +L AP LS+EGEAAC LEALA Sbjct: 595 QKINCPTISSAGRLFDAVAYSLNIAPENLSWEGEAACRLEALAGQSQFTEKSAVKIRQIL 654 Query: 630 HGVTHPVTMPRVDNQ---LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM 686 + N L+LA FWQ W N++A +A+AFH ALA GFA L R+QA Sbjct: 655 PEFADELIWTNDKNNKTFLNLAKFWQSWRNYKAQKADKAFAFHLALAAGFAELARQQANK 714 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 T+V SGGV+HNRLLR L L +F +L P GDGGLSLGQ IAA Sbjct: 715 YQCRTIVLSGGVMHNRLLRRLLKENLQEFNVLSAHQFPMGDGGLSLGQAAIAA 767 >UniRef50_Q8U3B1 Hydrogenase expression/formation regulatory protein n=6 Tax=Euryarchaeota RepID=Q8U3B1_PYRFU Length = 779 Score = 915 bits (2365), Expect = 0.0, Method: Composition-based stats. Identities = 287/776 (36%), Positives = 402/776 (51%), Gaps = 48/776 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLRE---DPETFLVQL 61 ++ ++G VQ VGFRPFV+++A NL G V N GD GVE+ + D E F+ L Sbjct: 7 MKAYRIHVQGIVQAVGFRPFVYRIAHAHNLRGYVRNLGDAGVEIVVEGREEDIEAFIKDL 66 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNT 118 Y+ PPLARID VERE Q F I +S+ G ++ I PD A C CL E+ Sbjct: 67 YKKKPPLARIDKVEREEIPL-QGFDRFYIEKSSTEKKGEGDSIIPPDIAICEDCLRELFN 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P ++RY YPFI CT+CGPRFTII +PYDR T M FP+C C EY DPL+RR+HA+P Sbjct: 126 PTDKRYMYPFIVCTNCGPRFTIIEDLPYDRENTAMREFPMCEFCRSEYEDPLNRRYHAEP 185 Query: 179 VACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 VACP CGP + + L+ A + G IVAIKGIGG HLACDA + VA Sbjct: 186 VACPTCGPSYRLYTSDGNEIIGDPLRKAAKLIDKGYIVAIKGIGGIHLACDATREDVVAE 245 Query: 239 LRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR R RP KP A+M + + + LT+ PIV + KK L +++AP Sbjct: 246 LRKRIFRPQKPFAIMAKDLETVRTFAYISPEEEEELTSYRRPIVALKKKEPFPLPENLAP 305 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 L+ +GVMLP ++L + P+ VMTS N G P NE+A L+ +AD L+H Sbjct: 306 GLHTIGVMLPYAGTHYILFHWSKTPVYVMTSANFPGMPMIKDNEEAFEKLRDVADYLLLH 365 Query: 352 NRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 NR I R DDSVVR ++RRSRG+VP + +P +K L +GA+L N F +V Sbjct: 366 NRRIPNRADDSVVRFVDGRRAVIRRSRGFVPLGIEIPFEYKG----LAVGAELMNAFGVV 421 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQW----A 463 + + SQ++GD S + REA+R I VV D HP Y +++ A Sbjct: 422 KNGKVYPSQYIGDTSKIEVLEFMREAVRHFFKILRVDNLDLVVADLHPSYNTTKLGMEIA 481 Query: 464 REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 E V HH+AH A+ +AEH +V+ + LDG+G G +G WGGE + ++Y Sbjct: 482 EEFGAEFLQVQHHYAHVASVMAEHNL----EEVVGIALDGVGYGTDGKTWGGEVIYLSYE 537 Query: 524 ECEHLGGLPAVALPGGDLAAKQPWRNLLAQC-LRFVPEW---------QNYSETASVQQQ 573 + E L + LPGGDLA+ P R L+ L E N ++ + Sbjct: 538 DVERLAHIEYYPLPGGDLASYYPLRALIGILSLNHDLEEVEKIIREFCPNAIKSLKYGET 597 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 + V+ R + GIN ASS GR DA + L + YEGE A LE+ A Sbjct: 598 EFRVIMRQLSSGINVAYASSTGRVLDAFSVLLNVSYRR-HYEGEPAMKLESFAYQGKN-D 655 Query: 634 HPVTMPRVDNQLDLATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQATMRGITT 691 +T P ++ ++ +++ L +A A++ H ALA+ FA + E+A G T Sbjct: 656 LKLTAPIEGEEIKVSELFEEVLELMGKANPKDIAYSVHLALARAFAEVSVEKAKEFGAKT 715 Query: 692 LVFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 +V GGV +N L+ + + L +P GD G+++GQ + +L G Sbjct: 716 VVLGGGVGYNELIVKTIRKIVEGRGLRFLTTYEVPRGDNGINVGQAFLGGL-YLEG 770 >UniRef50_Q02987 Carbamoyltransferase hypF n=10 Tax=Rhodobacteraceae RepID=HYPF_RHOCA Length = 739 Score = 911 bits (2356), Expect = 0.0, Method: Composition-based stats. Identities = 333/747 (44%), Positives = 429/747 (57%), Gaps = 21/747 (2%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHC 65 ++R+RG+VQGVGFRPFVWQLA+ L G V ND +GV +R+ D F L Sbjct: 1 MQAWRIRVRGQVQGVGFRPFVWQLARARGLRGVVLNDAEGVLIRVAGDLGDFAAALRDQA 60 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLAR+D+VE + LP F I S T++ PDAATCP CLAE+ G RR Sbjct: 61 PPLARVDAVEVTAAVCDDLPEGFQIAASGAAGAETRVTPDAATCPDCLAEIRGEG-RRRG 119 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y F NCTHCGPRF+I++++PYDR T MA F +CPAC EY DP DRRFHAQP+ACP+CG Sbjct: 120 YAFTNCTHCGPRFSILQSLPYDRARTTMAPFAMCPACRAEYEDPADRRFHAQPIACPDCG 179 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P L G A+ A A+LK G+I+A+KG+GGFHLACDA N++AV LRARK R Sbjct: 180 PRLWL-EAGGAELPGDAIGLAAARLKAGEILAVKGLGGFHLACDATNADAVDLLRARKRR 238 Query: 246 PAKPLAVMLPV-----ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 PAKP A+M + AA L PAAPIVL+ + L + +AP + E+GVM Sbjct: 239 PAKPFALMAREEDLARIVAVSPAALAALRDPAAPIVLMPAR--GSLPETLAPGMAELGVM 296 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL HLLL LVMTSGNLSG P I N++A L AD FL+H+R I +R+D Sbjct: 297 LPYTPLHHLLLDAFGGVLVMTSGNLSGAPQVIGNDEAREKLSAFADAFLMHDRAIARRLD 356 Query: 361 DSVVRES-GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 DSVVR +LRR+RG VP L LPPGF+ P ++ G +K CL++ QA+L HL Sbjct: 357 DSVVRVDPPMVLRRARGQVPGTLPLPPGFETAPQIVAYGGQMKAALCLIKTGQALLGHHL 416 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLH 475 G+L + + +A ++D PQ V D HP + +S+ A + +P V H Sbjct: 417 GELDEALTWEAFLQADADYAALFDHRPQAVAVDLHPDFRASRHGAARAGRLGVPLIAVQH 476 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH AACL E+ WP DGG V + LDG+G+G +G +WGGE L +Y+ E + L Sbjct: 477 HHAHLAACLGENLWPKDGGKVAVIVLDGLGLGPDGTVWGGELLLGDYKGFERVAWLKPAP 536 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 L GGD A +PWRN L + + + +GINAPL+SS G Sbjct: 537 LIGGDRAQIEPWRNALVRLDAAGLSD---LADRLFPAAPRDLARQLAAKGINAPLSSSAG 593 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWL 655 R FDAVAA LG P SYEGEAA LE+LAA V +P V +D A + Q L Sbjct: 594 RLFDAVAACLGICPMRQSYEGEAAMRLESLAADTGPVP---DLPCVGGAIDPAPLF-QLL 649 Query: 656 NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADF 715 ++ A A H +LAQ FAA R + +GG N L ++LAD Sbjct: 650 AAGERPDRVAHALHASLAQAFAAEARRLIEAGQAEAVALTGGCFQNSRLATMTRNFLADQ 709 Query: 716 TLLFPQSLPAGDGGLSLGQGVIAAARW 742 +L +PA DGGL+LGQ ++AAA+ Sbjct: 710 GILTQGRIPANDGGLALGQALVAAAKL 736 >UniRef50_A5IEY4 Hydrogenase maturation protein HypF n=4 Tax=Legionella pneumophila RepID=A5IEY4_LEGPC Length = 741 Score = 908 bits (2347), Expect = 0.0, Method: Composition-based stats. Identities = 287/764 (37%), Positives = 406/764 (53%), Gaps = 50/764 (6%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLY 62 VQ+ I+G VQGVGFRP V++LA+Q+ L G V N+ GV + ++ + F+ +L Sbjct: 1 MELERVQISIQGLVQGVGFRPCVYKLAKQMELTGFVQNNASGVLIEIQGNYLSQFIPKLR 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 + PPLA I ++E F I S G +NT I PD C CL E+ P R Sbjct: 61 EQLPPLAAIHNLEFTSLPIVPNERAFEILDSQQGKINTVITPDVCICSECLGELFDPQSR 120 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 YRYPF+NCTHCGPRFTI R +PYDR T M+ FPLC +C +Y +P +RR+HAQP AC Sbjct: 121 YYRYPFLNCTHCGPRFTITRNLPYDRCQTSMSQFPLCQSCQSDYLNPDNRRYHAQPTACS 180 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 +CGP L ++ +++ G+I+A+KG+GG+ L CDARN A++ LR R Sbjct: 181 QCGPQLAL-----------SVDKVAQRIRDGEIIALKGLGGYQLICDARNEGAISQLRLR 229 Query: 243 KHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K R AKP A+M+ + AR +L + PIVL+ KK L D IAP LN Sbjct: 230 KSREAKPFALMVVNAKSAEKIAEVSPQARLVLESRERPIVLLRKKKA-LLPDGIAPGLNH 288 Query: 297 VGVMLPANPLQHLLLQEL-QCP-------------LVMTSGNLSGKPPAISNEQALADLQ 342 G+MLP+ PL +LL P LV+TS N+ G+P I +++A L Sbjct: 289 FGIMLPSTPLHYLLFNSFLGNPDYCQWLDEYHSMVLVVTSANIGGEPLIIDDKKAEQGLI 348 Query: 343 GIADGFLIHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGA 399 IAD + H+R+I+ R DDSVVR + +RR+RGYVP L LP +PP + LG Sbjct: 349 SIADKIISHDREIITRTDDSVVRMVNDTSVLIRRARGYVPAPLRLP---YEIPPTVALGG 405 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 LKNTFC+ RGE+A +SQH+G L++ + E+L + P+ + HD HP + + Sbjct: 406 HLKNTFCITRGEEAFVSQHIGSLNNKATIEYFHESLNHLLKFLAVKPERIAHDWHPDFYT 465 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 S+ A++ ++P V HHHAH A+ +AEH V+ L LDG G G +G WGGE L Sbjct: 466 SRLAQKYDIPVYGVQHHHAHLASVVAEHGIQ---EPVLGLVLDGYGFGSDGEAWGGELLL 522 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 + E + +G + PGG+LAA++PWR + +Q L Sbjct: 523 LEKAEFKRVGHFFPIPQPGGELAAREPWRMAAGILHILGRGDE--ISQRFKEQPQSPFLL 580 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + +E+ I+ PL +SCGR FDAV+A LG + +EG AA LE++ + T+ Sbjct: 581 QLLEKKIHCPLTTSCGRLFDAVSALLGVEFLSR-FEGHAAMRLESMVTHPQVLNKGWTIN 639 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 DN D+ Q N A FH L G + + +GI L+ SGG Sbjct: 640 --DNVFDMRPTLQFIANT-TEQQLGANLFHGTLIAGLSEWVTGICREKGIHMLLLSGGCF 696 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 N++L L + L + L P+ LP DGG++LGQ I + Sbjct: 697 LNQVLAEGLINSLIKSGIKPLLPKLLPPNDGGIALGQAWIVGIK 740 >UniRef50_O07451 Carbamoyltransferase hypF2 n=8 Tax=Proteobacteria RepID=HYPF2_RALEH Length = 807 Score = 908 bits (2347), Expect = 0.0, Method: Composition-based stats. Identities = 310/794 (39%), Positives = 413/794 (52%), Gaps = 75/794 (9%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARI 71 G VQGVGFRPFV++LA++L L G V NDG GV++ + + +L + PPLAR+ Sbjct: 21 GVVQGVGFRPFVYRLARELGLAGWVRNDGAGVDIEAQGSAAALVELRERLRRDAPPLARV 80 Query: 72 DSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 D + E F I +S+ ++T I D A CP CLAE+ P RRYRY FI Sbjct: 81 DEIGEERCAAQVDADGFAILESSRSDAAVHTAIGHDTAVCPDCLAELFDPANRRYRYAFI 140 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 NCT CGPR+T+ A+PYDR T MA FP C C EY P RRFHA+P ACP+CGP L Sbjct: 141 NCTQCGPRYTLTWALPYDRATTSMAPFPQCRPCLDEYNAPEHRRFHAEPNACPDCGPSLA 200 Query: 190 WVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 ++ E + +A+L+ G+IVAIKG+GGFHLACDA N++AVA LR+RK R K Sbjct: 201 LLNAQGMPVEDVDPIAETVARLQRGEIVAIKGLGGFHLACDAHNADAVARLRSRKQREEK 260 Query: 249 PLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV-PELCDDIAPDLNEVGVML 301 P AVM+ + LLT PIVL+ K+ +AP L +GVML Sbjct: 261 PFAVMVANLATAAQWGDIGSGEAALLTASERPIVLLRKRSGVDGRFAGVAPGLVWLGVML 320 Query: 302 PANPLQHLLL-QELQCP-------------LVMTSGNLSGKPPAISNEQALADLQGIADG 347 P PLQ+LL + P LVMTS N G+P N++A L GIAD Sbjct: 321 PYTPLQYLLFHEAAGRPEGLGWLAQPQSLVLVMTSANPGGEPLVTGNDEAAQRLTGIADA 380 Query: 348 FLIHNRDIVQRMDDSVVRESG------EMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 FL+H+R+I+ R DDSVVR G + +RR+RGY P A+ L ++ P VL LG Sbjct: 381 FLLHDREILVRCDDSVVRGDGEPAPHVQFIRRARGYTPRAIKLA---RSGPSVLALGGSF 437 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 KNT CL RG++A +SQH+GDL + EA+ +Q + + PQ V HD HP + S++ Sbjct: 438 KNTVCLTRGDEAFVSQHVGDLGNAATCEALIEAVAHLQRVLEIRPQLVAHDLHPDFFSTR 497 Query: 462 WAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 A E+ +P V HHHAH AA LAEH I L LDG+G+G++G WGGE Sbjct: 498 HAAELAAQWGVPAVAVQHHHAHIAAVLAEHG---SDEPAIGLALDGVGLGDDGQAWGGEL 554 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L V+ C+ LG L + LPGGD AA++PWR A + E +Q + Sbjct: 555 LLVDGGACKRLGHLRELPLPGGDRAAREPWRMAAAALHAMGRGEE--IEGRFPRQPGAPM 612 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-------- 629 + R + + +NAPL+SS GR+FDA A LG T++YEG+AA LE LA S Sbjct: 613 VNRMLAQRLNAPLSSSMGRWFDAAAGLLG-TRETMAYEGQAAMLLEGLAESWGEQPSPGR 671 Query: 630 -------------------HGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHD 670 + P + L+ + + A FH Sbjct: 672 PKTVAHSLGGVPRSGGGTYKALALPDAWRIDAGNTLDLLPLLEALSAETNAARGAAQFHA 731 Query: 671 ALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDG 728 L A + G+ T+VF GG N +L L LA T+L + LP DG Sbjct: 732 TLVAALEAWTVATVQVTGVRTVVFGGGCFLNHILARNLCRRLAARGLTVLTARQLPPNDG 791 Query: 729 GLSLGQGVIAAARW 742 G++LGQ +A R Sbjct: 792 GIALGQVWVALQRA 805 >UniRef50_A6LXR8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LXR8_CLOB8 Length = 766 Score = 907 bits (2345), Expect = 0.0, Method: Composition-based stats. Identities = 264/774 (34%), Positives = 399/774 (51%), Gaps = 47/774 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 ++I G VQGVGFRPFV++ A+ + G V N G V + + E F+ + + Sbjct: 2 RYIIKIYGIVQGVGFRPFVYEKARDFKIRGSVQNIGGAVVIDCLGERENIKRFMFNVIKR 61 Query: 65 CPPLARIDSVER----------------EPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAA 107 P +A+I+ VE E I + +F I++S + PD A Sbjct: 62 PPSIAKIERVECTLIKKDLSTISCLDENEFIIKENIDKKFVIKESAEQKNEMRFVSPDIA 121 Query: 108 TCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYR 167 C CL ++ + G RY+Y F NCT CGPR++II+A+PYDR T M F +C C EY Sbjct: 122 VCDECLEDIRSKGNLRYKYAFTNCTQCGPRYSIIKALPYDRQNTTMKEFYMCEECKDEYE 181 Query: 168 DPLDRRFHAQPVACPECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 +PL RRFHAQP C +CGP L ++ + E ++ I+ ++ GKI+AIKGIGGFHL Sbjct: 182 NPLSRRFHAQPNCCEKCGPKLFLTNNRGDQVKCEDPIKETISLIEEGKILAIKGIGGFHL 241 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDK 280 CD RN A+ LR+RK R KPLA+M + D +++++ PIV++ K Sbjct: 242 VCDGRNEQAINLLRSRKQRKDKPLALMAKDIGVIKEICYISDKEEEVISSNKRPIVILKK 301 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 KY L + IAP N +GVMLP PL +LL E LVMTSGN+S P NE+AL Sbjct: 302 KYPFVLPEAIAPKQNSLGVMLPYTPLHYLLFNEKLDLLVMTSGNISSMPMEYKNEEALKH 361 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCL 397 L +AD FL+++R I ++DDSVV+ G+ ++R SRGY P +L ++ + Sbjct: 362 LNTVADYFLMNDRAIYVQVDDSVVKVIGQVEKVIRGSRGYRPYSLKAGVKN----EIIAV 417 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G K+T C+ + A LSQ+LGDL + ++ L+ + N++D + +D HP Y Sbjct: 418 GGQQKSTICVSKNGYAYLSQYLGDLGEFNCYKNFKYVLKHICNLFDINSDVLAYDMHPAY 477 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 S+++A+E + V HHHAH +C+AEH VI + DG G G +GA+WGGE Sbjct: 478 SSTKYAKEKKMRKIEVQHHHAHMVSCMAEHSI---YDSVIGIIFDGTGFGLDGAVWGGEF 534 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L N R + G L V L GG+ A K+PWR + + + V + V Sbjct: 535 LVGNRRVFKRAGQLKYVNLQGGEQAIKEPWRCASSYLYALGYDPEKII--QGVDNEKIKV 592 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 + +A++ IN ++SS GR FD VAA G ++SY+G+AA LE + ++ Sbjct: 593 VKQALDSKINCFVSSSVGRLFDTVAALCGI-RNSISYDGQAAIELENIIDYKIKESYSWD 651 Query: 638 MPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + + + + + L + +++ + FH++L + L+ + I + Sbjct: 652 IKEENGIFNIQYKSIIEGILGDIQKKELISKISSKFHNSLIKASCDLVCKLREKEHIDKV 711 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 V SGGV N L + L F + + + +P D G+S GQ +A A Sbjct: 712 VLSGGVFENHYLLKGIYVNLIKQGFKVFYNEQIPTNDEGISFGQLHVANAILEK 765 >UniRef50_A5ZMU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZMU3_9FIRM Length = 802 Score = 907 bits (2345), Expect = 0.0, Method: Composition-based stats. Identities = 280/812 (34%), Positives = 388/812 (47%), Gaps = 77/812 (9%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M++ Q+R+ G VQGVGFRP V + A +HG+VCN G VE+ + E F Sbjct: 1 MSEE--ITRQIRVYGIVQGVGFRPTVSRHAAARGIHGNVCNKGPYVEIYAQGPEEAVSGF 58 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMN 117 + + P A I + E S+ T+F I +S + PD A C C EM Sbjct: 59 ISDIENRPPKRAAILKINVENIENSERYTQFDIIESEKTKGEIFVSPDIAICEECKEEMF 118 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P RRY +PFINCT CGPR TI+ ++PYDR T M FP+CP C KEY P RR+ AQ Sbjct: 119 DPKNRRYLHPFINCTCCGPRLTILDSLPYDRERTSMKEFPMCPDCAKEYNAPATRRYDAQ 178 Query: 178 PVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 PV C ECGP + + G A+ A + G IVAIKGIGGFHL CDA N AV Sbjct: 179 PVCCNECGPEVYLI--GREERGREAITYARKTIAGGGIVAIKGIGGFHLCCDASNETAVR 236 Query: 238 TLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLV-DKKYVPELCDDI 290 LR K RP KP AVM + + ++L PI+L+ KK LC + Sbjct: 237 KLRQLKRRPMKPFAVMAKNLEAVRKECEVSAEQTRILDGHQKPILLLDKKKEAKILCPSV 296 Query: 291 APDLNEVGVMLPANPLQHLLL---QELQCP--LVMTSGNLSGKPPAISNEQALADLQGIA 345 AP +VGVMLP P+Q L+ ++ P LVMTSGN SG P +++A A+L G Sbjct: 297 APGNPKVGVMLPYAPVQLLIFTYDDGIEMPEFLVMTSGNTSGAPICRDDQEAEAELSGFC 356 Query: 346 DGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L H+R I R DDSV+ M+RRSRGY P + ++ VL +G +LK Sbjct: 357 DCMLSHDRKIRIRADDSVMDFYEDRPYMIRRSRGYAPLPFMVSTPYRGQ--VLAIGGELK 414 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 N+FC+ + S ++GDL D RE + M+ + + P+ V D HP Y S Sbjct: 415 NSFCIGVDNRFYPSPYVGDLEDLRTVKALRETVGRMETLLEVEPEIVCCDMHPKYNSVMV 474 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A E+ LP V HH+AH +C+AE+ VI ++ DG G G +G +WGGE L + Sbjct: 475 AEELGLPVVKVQHHYAHILSCMAENDC---AEQVIGVSFDGTGYGTDGTIWGGEILLSDL 531 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE----TASVQQQNWSVL 578 +G + GGD ++K+ WR ++ + + +E +Q +V Sbjct: 532 DGFTRVGSVMPFLQVGGDASSKEGWRIAVSLIYGMTGDRKKAAEITEKLELCTKQEANVQ 591 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA----------- 627 +R INA +++S GR FD V+A LG + ++EGEA+ ALE A Sbjct: 592 FTMADRKINAVISTSAGRLFDGVSAMLGIRRKS-TFEGEASMALEFAAEEYRETMLEKSK 650 Query: 628 --------------------SCHGVTHPVTMPRVDNQ---------LDLATFWQQWLN-- 656 ++ + R+D++ L+ + ++ LN Sbjct: 651 QQIQETEKYGYDKEDTDTLSRNENLSETEEIKRMDDKLISAGDRLLLNTESLIKEILNRQ 710 Query: 657 -WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--A 713 + A+ FH LA A + + G SGGV NRLL H L Sbjct: 711 LNGEDPGKLAYFFHRELACQITAACVKIRELSGCNKAALSGGVFQNRLLLELTDHMLLEQ 770 Query: 714 DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 F +L Q LP DGG++LGQ V A A Sbjct: 771 GFEVLKHQLLPPNDGGIALGQAVYAMAYLEKA 802 >UniRef50_C5V377 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V377_9PROT Length = 772 Score = 905 bits (2341), Expect = 0.0, Method: Composition-based stats. Identities = 311/770 (40%), Positives = 402/770 (52%), Gaps = 50/770 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCP 66 ++R+ G+VQGVGFRPFV++LA +L L G V ND GVE+ + + E + +L P Sbjct: 14 KIRVSGQVQGVGFRPFVYRLAHELALAGWVRNDSCGVEICVEGERERILNLIARLQSEPP 73 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LARI+ V E F+I S GG M T I PD A CP CLAE+ P +RRYR+ Sbjct: 74 KLARIEQVSYELTPQVFDVQGFSILASRGGVMQTSIAPDMAICPDCLAELFNPADRRYRH 133 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 FINC HCGPR+T+ R MPYDR T M F CPAC +EY DP RRFHAQP ACP CGP Sbjct: 134 AFINCIHCGPRYTLTRRMPYDRANTSMDKFVQCPACQREYDDPETRRFHAQPNACPACGP 193 Query: 187 HLEWVSHG-EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 L+ + E L + L+ G+IVA+KG+GGFHL C A N AV LRA K R Sbjct: 194 TLQLYDADFQPVETADPLVQTASLLRAGQIVALKGVGGFHLVCMADNQAAVNRLRALKQR 253 Query: 246 PAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYV-PELCDDIAPDLNEVG 298 KP AVM+ + LL T PIVL+ K E +APDL+ +G Sbjct: 254 DEKPFAVMVLNTRSAQHYGVVSADEAFLLETGERPIVLLGKHPACDEDLPCVAPDLSHIG 313 Query: 299 VMLPANPLQHLLLQE-LQCP-------------LVMTSGNLSGKPPAISNEQALADLQGI 344 ++LP PL +LL E L P LVMTS N G+P I++++A A + Sbjct: 314 LLLPYTPLHYLLFHELLGHPDGINWLQQATKIALVMTSANAGGEPLVINDDEARA--SRL 371 Query: 345 ADGFLIHNRDIVQRMDDSVVRESG-----EMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 ADG+L H+RDI+ R DDSV+R + +RR+RGY P + LP P VL LG Sbjct: 372 ADGYLTHDRDILHRCDDSVMRVVPQAPKFQFIRRARGYTPRRILLP---FAAPSVLALGG 428 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 LKNT C+ RG +A +SQH+GDL G + E + + +I+D PQ V HD HP + Sbjct: 429 GLKNTVCVTRGNEAFVSQHIGDLDHAGARAMLDETVTHLCDIFDVEPQCVAHDLHPDCYT 488 Query: 460 SQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 SQ+A +P V HHHAH A AE+ V+ L LDG G G +G WGG Sbjct: 489 SQYAARFAAARGVPMIAVQHHHAHINAICAEYAVT---QPVLGLALDGAGWGTDGTSWGG 545 Query: 516 ECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNW 575 E LRV+ + E LG L AVALPGGD AA +PWR A + Q Sbjct: 546 ELLRVSGAQFERLGHLAAVALPGGDRAACEPWRMASAALFEMGKGAEILQ--RFSNQPAA 603 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTH 634 +A + RG++ P +SS GR FD A LG + YEG+AA LEALA Sbjct: 604 PTVAAMLARGLHCPQSSSMGRLFDIAAGLLGVSQI-QHYEGQAAMHLEALAVRQGEVKPL 662 Query: 635 PVTMPR-VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 + LD + +Q + P + A FH ++ G A + + A GI + Sbjct: 663 DGGYRLAENGVLDFQSLLRQLASCNDP-SFGAALFHATISGGLIAWVSDAAQKTGIGCVA 721 Query: 694 FSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GG + N LL L L +L Q LP DGG+SLGQ +A + Sbjct: 722 LGGGCLLNSLLSEALTSGLSKQGLQVLSAQLLPPNDGGISLGQAWVAINQ 771 >UniRef50_B4U668 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U668_HYDS0 Length = 736 Score = 904 bits (2336), Expect = 0.0, Method: Composition-based stats. Identities = 242/753 (32%), Positives = 369/753 (49%), Gaps = 34/753 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLV 59 M + +L I+G VQGVGFRPFV+ LA L G V N+ DGV + + D + F+ Sbjct: 1 MNVDK-KRFRLLIKGTVQGVGFRPFVYNLATSLGAKGFVLNNADGVTIEIENVDIDKFIY 59 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNT 118 L PPL+ I+ + + W +F I +S G + PD C CL E N Sbjct: 60 LLKAKKPPLSEIEDITIKTLDWF-GFEDFKIEESEAFGDKTPSVPPDMGICEDCLKEFND 118 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 +RRY+YPFINCT+CGPR++I+ +PYDR T M F +C C KEY D +RRFHA+ Sbjct: 119 LNDRRYKYPFINCTNCGPRYSIVLDIPYDRKNTTMNVFEMCEDCKKEYEDKTNRRFHAEA 178 Query: 179 VACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 ++CP CGP + W + +E + LK KI+A+KG+GGFHL C+A + AV T Sbjct: 179 ISCPNCGP-IYWYEKDGNIYKENIFELMAKDLKDSKIIALKGLGGFHLICNALDEKAVRT 237 Query: 239 LRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK R +KP +M + + + + LT+ PIVL+ +K ++ Sbjct: 238 LRERKKRSSKPFGIMFKSLEEVLKYLEPKEDEIKALTSVQKPIVLIKRK--SPYFEEACK 295 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ VG L + L + P++ TSGN+S P N++A + L+ IADGF +HN Sbjct: 296 GLSSVGAFLAYTGIHLRLFDFIDFPIIATSGNISDTPICKDNDKAKSKLKDIADGFFMHN 355 Query: 353 RDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDI + +DDSV + ++R +R Y P + K + L +GA LK+T + + Sbjct: 356 RDIKRPIDDSVIKLIDNDVSIIRLARSYTPKPIYTNTHAKAIS--LGMGAFLKSTISIFK 413 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 VLS H+GDL ++ L YD P VV D HP + SS +A+ M Sbjct: 414 NNTIVLSPHIGDLESIDTIEHYKNTLEDFLRFYDVKPDIVVCDMHPNFFSSIYAKSMFSN 473 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 T+ HH AH + +AE+ +D ++ + DG G GE+G +WGGE + + Sbjct: 474 IITLQHHKAHILSVIAENNISIDQE-ILGIAWDGTGYGEDGTIWGGEFFVGDAYNLKRAF 532 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQNWSVLARAIERGI 586 + L G + A K P R +L+ + E E +++ L + E I Sbjct: 533 YIKPYKLIGNEKAIKDPRRIVLSFLFELLKEKAYKHPLIEKLHFEEKELKTLYKMWENDI 592 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N SS GR FD VA +G + YE + A +E +N++ Sbjct: 593 NTTKTSSIGRLFDMVAYLMGLTD-VIDYEAKGAMMVE---DRYIDSKEYYDFHISNNEII 648 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 ++ ++ L + +++ A F + L + ++++ +V SGGV +NR L Sbjct: 649 IS--FEDILGEKE-IDKMASKFINTLFEIIVSIIKLL----KAKNVVVSGGVFYNRPLMR 701 Query: 707 RLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 739 +L L L + + +P GDGG+S+GQ Sbjct: 702 KL-KALDGINLFYNKKIPTGDGGISVGQAFYGG 733 >UniRef50_B8FQW6 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfitobacterium hafniense RepID=B8FQW6_DESHD Length = 758 Score = 904 bits (2336), Expect = 0.0, Method: Composition-based stats. Identities = 286/768 (37%), Positives = 401/768 (52%), Gaps = 45/768 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQH 64 + + + G VQGVGFRP+V++LA ++ + G V N GV + F +L Q Sbjct: 2 TTAYFIHLNGIVQGVGFRPYVYRLAHEMGIKGWVNNSSHGVYIHAEGLQVPVFYRRLLQE 61 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERR 123 PPLA+I E + +F I QS G + I PD ATC CLAE+ + R Sbjct: 62 VPPLAKITHEEYREVAF-GNYADFAILQSREEGQADVLISPDIATCGDCLAELRDVQDLR 120 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFINCT+CGPR+TII+ +PYDR T M +FP+CP C +EY DPL+RRFHAQPVAC + Sbjct: 121 YRYPFINCTNCGPRYTIIQDVPYDRAQTTMQSFPMCPVCAQEYADPLNRRFHAQPVACSQ 180 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP ++ ++ ++ G+I+AIKG+GGFHL CD N AV LR RK Sbjct: 181 CGPAVQLLNAQGDFCAGLGIEQIAR----GEIIAIKGLGGFHLVCDGGNPTAVQRLRQRK 236 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLN 295 R AKP A+M + + +LL + AAPIV++++K L D++AP L+ Sbjct: 237 ERGAKPFALMARNLEVIRRYLKVSLKEEELLKSSAAPIVILERKKESGNVLPDELAPGLH 296 Query: 296 EVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDI 355 +GVMLP PL LL LVMTSGNLSG+P +NE+A+ +L+GIAD FL+HNRDI Sbjct: 297 TLGVMLPYTPLHALLFDGAFDFLVMTSGNLSGRPLIYTNEEAVRELKGIADYFLLHNRDI 356 Query: 356 VQRMDDSVVRESGEML---RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ 412 DDSVV+ G+ RR+RGYVP P K +L +G +LKN FCL ++ Sbjct: 357 FHPCDDSVVQVIGDEAVLHRRARGYVPLPQKCPQDLKA--SILGVGGELKNAFCLGAKDR 414 Query: 413 AVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP-TQ 471 A SQ++GD+ ++R+ L Q + P+ V +DAHP + ++Q+A P Sbjct: 415 AFTSQYIGDMEGYENFQRFRQELASFQKVVQIVPEVVAYDAHPDFQTTQFALAGPWPQKI 474 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH + L EH + + DG G GE+ +WG E L+ N L L Sbjct: 475 KVQHHHAHLVSVLGEHGIT---APALGVVCDGTGWGEDRRIWGFEFLKGNAEGYRRLAHL 531 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY---SETASVQQQNWSVLARAIERGINA 588 + LPGGD AK P R A + E + + +L + +E+ + Sbjct: 532 EYLPLPGGDAGAKHPLRIAYAYGKSLLSEREWLMTERLWERLAGAEQKILDQQLEKRLQI 591 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA------ASCHGVTHPVTMPRVD 642 SS GR FDAV+A LG +++YEG+AA LE+ A S + + + Sbjct: 592 FETSSGGRLFDAVSALLGIC-TSVTYEGQAAIELESKAALWSGKNSEDALEPRYLIEWAE 650 Query: 643 N----QLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 N L + + + A+ FHD+LA G + E G LV + Sbjct: 651 NGECLILKVKELYWGIIQDVLDGKEPAFIAYHFHDSLAHGIVRTVLEL--QVGEGPLVLT 708 Query: 696 GGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 GGV N+LL ++ ++ + LP GDGGL+LGQ +I R Sbjct: 709 GGVFQNKLLTEKVLVLCKAFGIQVIRAKELPPGDGGLALGQILIGNER 756 >UniRef50_B9L8N7 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Nautilia profundicola AmH RepID=B9L8N7_NAUPA Length = 759 Score = 903 bits (2334), Expect = 0.0, Method: Composition-based stats. Identities = 250/784 (31%), Positives = 376/784 (47%), Gaps = 75/784 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHCP 66 ++ +I G VQGVGFRP V+++A++L+L G V N DGV + + + F+ L + P Sbjct: 2 RIKYKINGIVQGVGFRPTVYKIAKELDLKGYVLNSSDGVIIEIEGENQNKFIETLKNNLP 61 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLARID++E+E + T+F I +S T T I PD A C CL EM RRY + Sbjct: 62 PLARIDTIEKEILE-RKNYTDFEIIESKQTTKTTSISPDIAICDECLKEMFDKNNRRYLF 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TII+ +PYDR T MA F +C C +EY +PLDRR+HA+P C ECGP Sbjct: 121 PFINCTNCGPRYTIIKDIPYDRKNTSMAKFKMCEKCYEEYTNPLDRRYHAEPTCCFECGP 180 Query: 187 HLEWVSHGEHAEQEAA-----------LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 L E+ + ++ ++K GKIVAIKG+GGFHL C+A N A Sbjct: 181 ELNVKWKMENGTWKELRIENGEWRIKKIELIAEKIKEGKIVAIKGLGGFHLVCNATNEEA 240 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDD 289 V LR RK RP KP A+M D + + +L+T+ PIVLV K+ Sbjct: 241 VKELRRRKQRPTKPFAMMFKDLDTIKEYCDLSAKDTELITSKEKPIVLVKKRVD---LPQ 297 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 IA ++ GV LP P+ +LL + + P+V TS N+S +P + + + L + D L Sbjct: 298 IADGIDRYGVFLPYTPVHYLLFEYIDFPIVATSANISDEPIIRDSNELVEKLGNVVDYIL 357 Query: 350 IHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVP-------------- 392 ++RDI+ DDSVV+ +R +RGY P + N Sbjct: 358 DNDRDIINACDDSVVQAVEFEYITMRCARGYAPLMKNVKFKMDNGKWTMENEKDKIDRNN 417 Query: 393 -----------PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 +L +GA+ KNT L ++ +LS H+GDL G + + + + Sbjct: 418 NSQFSILNSQLNILGVGANQKNTISLSFKDKFILSPHIGDLGTIGSIEYFERTIDTFRRL 477 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 YDF ++ D HP Y S++WA + N + HH+AHA A + E+ GD +A Sbjct: 478 YDFEEDVIICDKHPYYESTKWALKQNKKIYQIQHHYAHALATMFEYDLE---GDYLAFIF 534 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG G G++G +WGGE N E + L GG+ A K P +A Sbjct: 535 DGTGYGDDGTIWGGEVFIANRHTYERVHYFKQFKLIGGEKAVKNPANMAVALL------D 588 Query: 562 QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACA 621 +E ++ LA+ + +G + PL SS GR FD VA G +EG + Sbjct: 589 DEIAEKFKNRK-----LAKNLSKG-SFPLTSSMGRIFDMVAYLAGMIERN-EWEGMSGLL 641 Query: 622 LEALAASCHGVTHPVTMPR---VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAA 678 +E + R V ++D + + F +++A Sbjct: 642 IEKYYNPEIAEYISLADSRGCGVKKEIDFVELLNFAAKNRGDFELVSSVFINSIANCVVE 701 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 + + M + ++ GGV N+ L + + ++ + F +++P DGG+S+GQ Sbjct: 702 I----SEMYDLD-VILGGGVFQNKTLLSEILKR-SNKKIYFNKTIPINDGGISVGQTAWG 755 Query: 739 AARW 742 Sbjct: 756 IWNL 759 >UniRef50_B2JXA8 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Bacteria RepID=B2JXA8_BURP8 Length = 791 Score = 901 bits (2330), Expect = 0.0, Method: Composition-based stats. Identities = 289/783 (36%), Positives = 401/783 (51%), Gaps = 43/783 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQL 61 N ++R+ G VQGVGFRPFV+++A L G V ND DGV + + D Sbjct: 14 GGNGPTRWRVRVTGVVQGVGFRPFVYRIATSRALRGWVLNDADGVLIEVEGDAHALADFA 73 Query: 62 ---YQHCPPLARIDSVEREPFIWSQLPTE-FTIRQST-GGTMNTQIVPDAATCPACLAEM 116 PPLAR+ S++ TE F IR S G+ Q+ D+ C ACL EM Sbjct: 74 AALRSELPPLARVASLQSHCVAPLLDATERFVIRDSERSGSNLAQLPADSHVCDACLGEM 133 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P RRYRYPFINCT+CGPRF++I+A+PYDR T M AF +C C+ EYRDP +RR+HA Sbjct: 134 ADPANRRYRYPFINCTNCGPRFSLIKAIPYDRINTTMRAFTMCTRCEAEYRDPSNRRYHA 193 Query: 177 QPVACPECGPHLEWVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 QP ACPECGP +E + AL+AAI L+ G VA+K +GGFHL DARN +A Sbjct: 194 QPNACPECGPRVELYDADRMLSAGDDALRAAIDALRTGLTVAVKSVGGFHLVVDARNPDA 253 Query: 236 VATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LR RK R +KP A+M+ + + Q L +P PIVL+ K L ++ Sbjct: 254 VARLRDRKRRNSKPFALMMASVETARRWTDCSELEAQWLRSPGRPIVLLRKLNGVGLAEN 313 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +AP +GVMLP+ PL +LLL + P LVMTSGN+S P A NE+AL L ++D Sbjct: 314 VAPRNPNLGVMLPSAPLHYLLLSDPDLPALVMTSGNVSEFPIAYRNEEALVRLFEVSDLV 373 Query: 349 LIHNRDIVQRMDDSVVRESGE---------MLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 L+++RDI R+DDSV+R S RR+RG+ P + + +++ PV+ GA Sbjct: 374 LLNDRDIAIRIDDSVIRCSNHPQLPEPQISFFRRARGFAPYVIEV---GRSMAPVVAYGA 430 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 +LK T L E+ +SQH+GDL +D + + ++Y P D HP + S Sbjct: 431 ELKTTVALADRERIYVSQHIGDLGNDDTFRSHQTIASHLADLYRVKPTVAACDLHPSFRS 490 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 ++ A + ++ Q V HHHAH A+CLA++ G I + LDG G G +G WGGE Sbjct: 491 TRLASDTHVSRQQVQHHHAHMASCLADNGLD---GPAIGVILDGAGYGIDGTTWGGEFFI 547 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNY----SETASVQQQNW 575 + R + G L ++L GGD A +P R LA L + A++ + Sbjct: 548 GDARAVQRAGHLRYLSLLGGDKAVHEPVRTALALALESFDGDEGMLACVPALAALGHEAR 607 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 V A +GIN ASS GR FD VAA G + YE E L A +T P Sbjct: 608 HVYATMWRKGINVTRASSMGRLFDGVAALAGVC-SRAEYEAHGPIEFEGLLARDLAMTEP 666 Query: 636 VTMPRVDN-----QLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMR 687 + +LD +Q ++ + + FH + A+L + Sbjct: 667 YRYAFDPSADAPIELDYRPLVRQVVSDTAGSVELATISRRFHSTIVLAIASLCDLLRSRH 726 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + T+V SGGV N L L F + + +P DGG++LGQ V+A+AR A Sbjct: 727 ALDTVVLSGGVFLNEFLLVNALVELRRRGFDVHAHRDVPTNDGGIALGQAVVASARITAE 786 Query: 746 EVQ 748 Sbjct: 787 RKS 789 >UniRef50_D0Z3I5 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3I5_LISDA Length = 786 Score = 900 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 275/789 (34%), Positives = 392/789 (49%), Gaps = 70/789 (8%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPP 67 + + G VQGVGFRPFV+QLA + L G V ND +GV++ + E F+ QL + PP Sbjct: 7 IHVTGIVQGVGFRPFVYQLALEYQLLGWVINDSEGVKIDAQGTVEQLTQFVEQLERQAPP 66 Query: 68 LARIDSVEREPFIWSQL---PTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERR 123 L+RID +E PTEF I++S + + I PD C ACLA++ P R Sbjct: 67 LSRIDHIEITVLPSWNKAQCPTEFAIQESCERESTSVSISPDQGVCQACLADLEDPRSRY 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NCTHCGPR++II+A+PYDR T MA F C C++ Y++PLDRR+HAQP++C Sbjct: 127 YHYPFTNCTHCGPRYSIIKALPYDRCHTSMANFQFCQPCEQAYKNPLDRRYHAQPISCEH 186 Query: 184 CGPHLEWVSHGEHAEQ---EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + W H E A+++ Q+ G +VA+KG+GGFHL CDA ++ AV LR Sbjct: 187 CGPWVSWHQHSTAETDSVGEQAIESLAKQILAGGVVALKGLGGFHLICDASDNVAVERLR 246 Query: 241 ARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 KHRP KPLA+M+ D Q L PIVL+ K L ++AP++ Sbjct: 247 QYKHRPKKPLAIMVQSLSDARVFAQGCDKEWQTLDEQKRPIVLLKKNRESILAPNLAPNV 306 Query: 295 NEVGVMLPANPLQHLLLQEL-------QCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +G+MLP PL LL +L LVMTS N SG P A E+ +A DG Sbjct: 307 PYLGIMLPYTPLHFLLFAKLAELKPHTPHALVMTSANRSGLPIATCFEEVIAQFGTELDG 366 Query: 348 FLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L HNR I+ DDS V+ + +LR +RGY P + + L +GA K + Sbjct: 367 ILNHNRPILHACDDSLVHVIDDKVHVLRMARGYAPFSRFADTHNQAT---LAMGAQQKAS 423 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 L +Q +LS +GDL + +M+++EA++ ++Y +PQ +V D HPGY S++ A+ Sbjct: 424 IGLALPQQWMLSPFIGDLDNVDNEMRYQEAIKTFTSLYHVSPQRIVCDYHPGYRSTELAQ 483 Query: 465 EM-----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 M ++ + HHHAH A +AEH V+ T DG G GE+ +WGGE L Sbjct: 484 RMVTDDSSISLTQIQHHHAHVLAVMAEHNLT---EQVLGFTFDGTGYGEDETVWGGEVLL 540 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNW 575 + + + L + L GG+ A K+P R LLA L F+ Q Sbjct: 541 ADTHNFKRVASLRSFRLLGGEQAIKEPARLLLAILLEFMSIEQVCSLQEKLFPQWTSATL 600 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTH 634 L + + G +P SS GR DA+A LG +SYEGEA LE A S + + + Sbjct: 601 ENLYQLWQSGSRSPYTSSMGRLIDAMAYLLGVL-ERVSYEGEAGLLLEQAALNSQYELLY 659 Query: 635 PVTMPRVDN--------QLDLATFWQQWLNWQAPVN-------QRAWAFHDALAQGFAAL 679 P+ + + +D ++ L+ + V + A AF +AQ L Sbjct: 660 PLPELSLVSLNAQSDFTVIDWQPCFESVLSCRLSVAFNQMLQNRLAHAFLRNIAQSIFTL 719 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT--------LLFPQSLPAGDGGLS 731 LV SGGV NR++ + + + +P DGG++ Sbjct: 720 A----ENYPALPLVLSGGVFQNRIILQSAYTLASARDSALQQKQPIYSGELIPVNDGGIA 775 Query: 732 LGQGVIAAA 740 GQ A Sbjct: 776 AGQLWYAIH 784 >UniRef50_B6YT84 Hydrogenase maturation protein HypF n=6 Tax=Euryarchaeota RepID=B6YT84_THEON Length = 813 Score = 897 bits (2320), Expect = 0.0, Method: Composition-based stats. Identities = 269/773 (34%), Positives = 399/773 (51%), Gaps = 45/773 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD-GVEVRLRE---DPETFLVQL 61 +L ++G VQ VGFRPFV+++A + L G V N GD GVE+ + D FL+ L Sbjct: 44 MKAYRLHVQGIVQAVGFRPFVYRIAHEHGLRGYVKNLGDAGVEIVVEGPEKDIGAFLLDL 103 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT--QIVPDAATCPACLAEMNTP 119 + PPLA+I+ +++ Q F I +S+ G I PD A C CL E+ P Sbjct: 104 REKLPPLAKIEKIKKREIP-IQGFDRFYIEKSSQGGSGGDSIIPPDIAICEDCLRELFDP 162 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 +RY YPFI CT+CGPRFTII +PYDR T M FP+C C+ EY+DPL+RR+HA+PV Sbjct: 163 TNKRYMYPFIVCTNCGPRFTIIEDLPYDRVNTTMREFPMCDFCESEYKDPLNRRYHAEPV 222 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP CGP ++ L+ A + G IVAIKGIGG HLACDA + VA L Sbjct: 223 CCPVCGPSYRLYTNDGEELIGDPLKKAAELIDNGYIVAIKGIGGIHLACDATREDVVAEL 282 Query: 240 RARKHRPAKPLAVMLPVADGLPDAA----RQL--LTTPAAPIVLVDKKYVPELCDDIAPD 293 R R HRP KP A+M + + + A +L L + PI+ + KK L +++AP Sbjct: 283 RKRIHRPQKPFAIMAKDVETIEEFAFISPEELEELKSYRRPIMTLRKKEPFPLPENLAPG 342 Query: 294 LNEVGVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ +GVMLP ++L + P+ VMTS N G P NE+A +L+ +AD FL+HN Sbjct: 343 LHTIGVMLPYAGTHYILFHYSKTPVYVMTSANYPGMPMVKDNERAFEELKDVADYFLLHN 402 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I+ R DDSVVR ++RRSRG+VP + +P ++ L +GA+L N F + + Sbjct: 403 RKILNRADDSVVRFVNGRRAVIRRSRGFVPLPIEIPFDYRG----LAVGAELMNAFGVTK 458 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFT-PQYVVHDAHPGYVSSQWA----R 464 + SQ++G+ S + REA+ + I +V D HPGY +++ A Sbjct: 459 NGKIYPSQYIGNTSKVEVLEFMREAVEHFKRILRVRDFDLIVADLHPGYNTTKLAMEMAN 518 Query: 465 EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 E+ + V HH+AH A+ +AEH +++ + +DG+G G +G WGGE + ++Y + Sbjct: 519 ELGVEFLQVQHHYAHIASIMAEHNL----DEIVGIAVDGVGYGTDGHTWGGEVIYLSYED 574 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----------NYSETASVQQQN 574 E L + LPGGDLA+ P R L+ + + E+ + Sbjct: 575 VERLAHIDYYPLPGGDLASYYPLRALMGILSKVYGIEELEEVIEKCCPKAIESLRYGKVE 634 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH 634 ++V+ + + +N ASS GR DA + L A YEGE A LE+ A Sbjct: 635 FNVVLTQLAKEVNTSYASSTGRVLDAFSVLLNVAYRR-HYEGEPAMKLESFAIRGKN-DL 692 Query: 635 PVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 ++P + + +QQ L A A++ H AL + FA + E+A G+ + Sbjct: 693 GFSVPVEGELIKVEELFQQALEINASPADVAYSVHLALGRAFAEIAVEKAKEFGVKNVGI 752 Query: 695 SGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 SGGV N L+ + + +P GD G+++GQ + +L G Sbjct: 753 SGGVAFNELIVKTVRKIVEANGLRFYSTYEVPRGDNGINVGQAFLGGL-YLEG 804 >UniRef50_Q1MQG6 Hydrogenase maturation factor n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQG6_LAWIP Length = 796 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 286/791 (36%), Positives = 411/791 (51%), Gaps = 59/791 (7%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLV 59 I+G+VQGVGFRPFV+ A +L L G V N GV + ++ D F Sbjct: 9 NMQLKRQGYTIKGRVQGVGFRPFVYCTATKLGLTGKVKNTIYGVWIEVQGDDSKLNIFKE 68 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNT 118 + P +A+ S+ + + TEF I +S+ G + I PD ATC C+ E+NT Sbjct: 69 MITNEKPSIAQFTSITMQSLGFQDKETEFLIEESSDGIQYTSLISPDIATCEYCVKELNT 128 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 + RY+YPFI+CT CGPR+TII PYDR T M++FP C C+KEY + LDRRFHAQ Sbjct: 129 TTDHRYQYPFISCTLCGPRYTIIHKAPYDRHHTSMSSFPFCFTCEKEYNNSLDRRFHAQS 188 Query: 179 VACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 ACP CGP L H A+ AI + GKI+A+KGIGGFHL CDA N++ V Sbjct: 189 NACPTCGPQLWLTDHDNRYITYNSEAILLAIEYIYKGKIIAMKGIGGFHLICDATNADVV 248 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 TLR RK+RP KPLAVM+P + + Q + +P PIV++ K L +I Sbjct: 249 NTLRYRKNRPDKPLAVMVPNINIARQIAYISEVEIQKMQSPECPIVIL-KAIPHSLPKNI 307 Query: 291 APDLNEVGVMLPANPLQHLLLQELQC---------PLVMTSGNLSGKPPAISNEQALADL 341 APD++ +G+MLP PL H+L L LVMTS N+SG +N+ AL L Sbjct: 308 APDVSTIGLMLPYTPLHHILCNTLTKVAELERIIPALVMTSANVSGGTIIYNNDDALIRL 367 Query: 342 QGIADGFLIHNRDIVQRMDDSVV----RESGE-----MLRRSRGYVPDALALPPGFKNVP 392 I D FL HNR+I+ +DDSVV G+ +RR+RGY P + + N P Sbjct: 368 NTITDFFLFHNRNIIVPVDDSVVCLREDNIGQSPNWHFIRRARGYAPLPITVKTLKDNTP 427 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 ++ LGA+ K+TFC RG+ LSQH+GDLS+ + + + ++ + ++ F+P+ VV D Sbjct: 428 CIIALGAEHKSTFCFTRGQDIFLSQHIGDLSEPETEWSFCQTVKHISQLFGFSPEVVVCD 487 Query: 453 AHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGAL 512 HP Y ++++A E LP + HH AH + LAEH + LTLDG G G +G + Sbjct: 488 LHPDYFTTRYAAEFGLPILQLQHHIAHGYSVLAEHGHK---EPALVLTLDGTGYGMDGTI 544 Query: 513 WGGECLRV--------NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC-----LRFVP 559 WGGE + +Y + E L L + LPGG+ A +PWR L Sbjct: 545 WGGELFYLYPEAVKGKSYEQGERLARLSLLPLPGGEKAIHEPWRLLSGFLALLKIHELEG 604 Query: 560 EWQNYSETASVQQQNWSV---LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + + W++ + + + L SSCGR FD V+ G ++YEG Sbjct: 605 VDSLVRQLWKNSPERWTIHSAIREMVSKD-KVKLTSSCGRLFDTVSTLFGLCDY-ITYEG 662 Query: 617 EAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQ---QWLNWQAPVNQRAWAFHDA 671 +AA LE + +++ D+ +LD F + + L + V+ A FH Sbjct: 663 QAAIRLEHQQDMSCNESLTISIVEKDSIYELDTTVFLKELIELLQQKISVSILARRFHIG 722 Query: 672 LAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGG 729 L +G A L + G+ T+ SGGV++N+ + + L L T L +++P+GDGG Sbjct: 723 LVEGLADLALIGSENTGVKTVGLSGGVLNNQTISSLLPKALRYRGLTPLMHKNVPSGDGG 782 Query: 730 LSLGQGVIAAA 740 +S GQ A+ Sbjct: 783 ISFGQAYWASM 793 >UniRef50_Q0HUQ7 (NiFe) hydrogenase maturation protein HypF n=13 Tax=Shewanella RepID=Q0HUQ7_SHESR Length = 840 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 275/821 (33%), Positives = 385/821 (46%), Gaps = 94/821 (11%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQ 60 QL I G VQGVGFRPFV++ A +L L G V N+ +GV + L+ ++F+ + Sbjct: 24 EQLERRQLHITGIVQGVGFRPFVYRWASELKLTGTVLNNANGVMIELQGPTAHLDSFVRE 83 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQ-------------STGGTMNTQIVPDAA 107 L + PPLARID + + P + T F I Q + D + Sbjct: 84 LTTNPPPLARIDQMTQSPLAVNLEETSFDIIQSDSQSDDQSDESGEHHLAALVAVSADKS 143 Query: 108 TCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYR 167 C CL++M+ P +R Y Y F NCT+CGPR+TII A+PYDR T MA F +CP C K Y+ Sbjct: 144 ICQDCLSDMHNPQDRHYGYAFTNCTNCGPRYTIINALPYDRHHTAMADFAMCPDCAKAYQ 203 Query: 168 DPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAA-----------LQAAIAQLKMGKIV 216 DPL+RR+HAQPV+CP+CGP L S + L AA +L G+I+ Sbjct: 204 DPLNRRYHAQPVSCPKCGPQLSLKSPQGELLAPNSLSALQDNSLAVLSAAAEKLAQGQIL 263 Query: 217 AIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDA------ARQLLTT 270 AIKG+GGFHL CDA N+ AV LR RK R AKPLAVM+P + Q L++ Sbjct: 264 AIKGLGGFHLMCDATNTLAVNQLRQRKQRKAKPLAVMMPSIEVAKRYVTGTQAEWQTLSS 323 Query: 271 PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPP 330 PIVL+ L IAP++ ++G+ LP PL HLLL + PLV TS N+SG+P Sbjct: 324 QERPIVLMQALDKHNLSHQIAPNIPKLGIFLPYTPLHHLLLGQFNGPLVATSANVSGEPI 383 Query: 331 AISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE---------SGEMLRRSRGYVPDA 381 ++ ++ L + D + HNR I+ DDSVV+ ++LR +RGY P + Sbjct: 384 ITDCDELISQLGHVVDAIVDHNRPILNGCDDSVVQLIQPPNGCAPQVQVLRLARGYAPLS 443 Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 LP +L +GA KN L G LS H+GDL + + L + Sbjct: 444 FPLPKPL--SHSILAVGAQQKNAIALGFGSNVFLSPHIGDLFSVSAEQYFERTLATFARL 501 Query: 442 YDFTPQYVVHDAHPGYVSSQWAREMN-------------LPTQTVLHHHAHAAACLAEHQ 488 Y F P+ +VHD HP Y S+WA + T +V HHHAH + +A +Q Sbjct: 502 YHFNPELIVHDKHPDYAPSRWAETQQQHSLDTQSQDTRPIQTLSVQHHHAHVLSVMAINQ 561 Query: 489 WPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWR 548 V+ + DG G+G +G+LWGGE L E L A+ L GG+ A KQP R Sbjct: 562 ---YQEPVLGFSFDGTGLGNDGSLWGGEVLLTTLNGAERLAHFEAIPLLGGEQAIKQPVR 618 Query: 549 NLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 LLA + + + + S L R + G + +SS GR FDA+A A Sbjct: 619 LLLALLFQQMSLEEVQTLTLPILTILSPITLSNLHRIWQNG-HGINSSSVGRLFDALACA 677 Query: 605 LGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT--------------- 649 LG T +EG+A +EA A P M + ++ Sbjct: 678 LGFIDTTQ-FEGQAGMLIEAAARRADAKQLPTLMLDLPLEISDMPSDSSMHEPHIWRSSQ 736 Query: 650 FWQQWLNWQAPVN-------QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 ++Q + Q A AF ++ A + GGV N+ Sbjct: 737 LFKQIITLITEAPLTDVLQAQIARAFLHSVGDAICG----YAARYPTLPVALCGGVFQNQ 792 Query: 703 LLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L + L T+L + +P DGG++LGQ + Sbjct: 793 YLLEYCLNKLHQQGNTVLPNKHIPVNDGGIALGQLWYGIHQ 833 >UniRef50_A6DBV8 Transcriptional regulatory protein HypF n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBV8_9PROT Length = 727 Score = 893 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 241/757 (31%), Positives = 372/757 (49%), Gaps = 51/757 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCP 66 + I G VQGVGFRP V+++A LNL G V N DGV + + + + FL +L + P Sbjct: 2 RYKYIINGIVQGVGFRPTVYKIATSLNLKGYVLNSSDGVIIEIEGKNRDKFLNELKNNLP 61 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA+I+ +E +F I+ S T T I PD + C CL EM RRY Y Sbjct: 62 PLAKIEKIECFKLPLKN-YKDFEIKYSINTTKTTSISPDISVCEDCLKEMRDKNNRRYLY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPR+TII +PYDR T M F +C C KEY +P++RRFHA+P++C ECGP Sbjct: 121 PFINCTNCGPRYTIIENIPYDRVNTSMKKFKMCENCKKEYENPIERRFHAEPISCYECGP 180 Query: 187 HLEW--------VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 L + + + ++ ++K GKIVAIKG+GGFHL CDA N +V Sbjct: 181 KLSVKFKIENGKWAVKDFNREIKKIEFIANKIKEGKIVAIKGLGGFHLVCDATNEKSVYE 240 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK+RP KP A+M + + + ++L+ + PIV+V KK IA Sbjct: 241 LRKRKNRPLKPFAMMFRDIEMIKKYADISNKEKELILSKERPIVIVKKKKE---LKGIAD 297 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 ++ GV LP P+ +LL L P+V TS N+S +P ++++ + L + D L +N Sbjct: 298 KIDRYGVFLPYTPIHYLLFDFLDFPIVATSANISDEPIIRNSKELIEKLGSVVDFILDNN 357 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 RDI+ DDSVV+ E +R SRG+ P + + P +L LGA+ KNT L Sbjct: 358 RDIINACDDSVVQVVNEERLFMRLSRGFAPKSFYIDKK--TSPNILALGANQKNTISLYF 415 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 ++ +LS H+GDL G + + + +Y+F ++ D HP Y S++WA N Sbjct: 416 NQKVILSPHIGDLKTLGSIEFFERTINTFRRLYEFKEDVIICDKHPYYESTKWALSQNKE 475 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 + HH +HA + + E+ G+ +A DG G G++G++WGGE RV E + Sbjct: 476 VIQIQHHFSHALSVMFENSLD---GEFLAFLFDGTGYGDDGSIWGGEVFRVTKHNYERIH 532 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 + L G + K P ++ + ++ +N+ ++ + + P Sbjct: 533 YIKPFKLIGSEKGVKNPSNYAISLI------DEQLAKNF----KNYEIIKKL--QNGPFP 580 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLAT 649 L SS GR FDAVA G YEG + +E + + + +LD Sbjct: 581 LTSSMGRVFDAVAFLSGMIDRN-EYEGISGLIIEKFYNENIKGFIDIGIKK---ELDFKE 636 Query: 650 FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 + + + F ++L L+ + + + ++ SGGV N+ L ++ Sbjct: 637 IFNFAYLNRGKFELVSSIFINSLVN----LVVKLSKYYNL-PVILSGGVFQNKTLLGKI- 690 Query: 710 HYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 L + + + +P DGG+S+GQ Sbjct: 691 --LKNIYAYYNKEIPINDGGISIGQVAYGIWNLRREN 725 >UniRef50_B5Y917 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y917_COPPD Length = 764 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 266/753 (35%), Positives = 377/753 (50%), Gaps = 40/753 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 RI G VQGVGFRPFV ++A+QLNL G V N G GV + ++ + + F +L Sbjct: 3 RKAFRINGIVQGVGFRPFVARIAKQLNLTGFVLNSGHGVYIEVQGEEHLVKVFEEKLNNE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 P + + Q +F I S + T I PD ATC C+ E+ TP RR Sbjct: 63 KPHESIYIEFDTWECEEIQDEKDFVILASETNADVFTFIPPDLATCHDCVEEILTPSNRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YP NCT+CGPR+T+I +PYDRP T M FPLC C +EY +P DRR+HAQPVACP+ Sbjct: 123 YLYPLTNCTNCGPRYTVIEKLPYDRPNTSMKPFPLCAECYREYTNPKDRRYHAQPVACPD 182 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP VS + L+ + LK GK+VAIK +GG+ LACDA N AV LR K Sbjct: 183 CGPQTYIVSKDGGMIADPDLRKTVDILKDGKVVAIKSLGGYLLACDALNETAVNRLRKLK 242 Query: 244 HRPAKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 RP +P A+M + + A + LL +PAAPIVL+ KK L + +AP N +G Sbjct: 243 RRPQEPFALMSTLPNIENFCYVNSAEKDLLESPAAPIVLLQKKPYGSLPEVVAPGQNYLG 302 Query: 299 VMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 MLP +PL H++ LVMTS NL G+ L L +AD L H+R IV Sbjct: 303 FMLPYSPLHHIIFYHWPEAVLVMTSANLHGEVIYYEESD-LPKLLEMADYVLTHDRAIVT 361 Query: 358 RMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 +DDSVV+ ++RRSRGYVP + L K P+L G D K T L + A+ Sbjct: 362 HVDDSVVQMLSDGPHLIRRSRGYVPLPIKLSNQCKV--PILATGGDEKATPALAKNGYAI 419 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 L Q++GDL + + + + ++ +++ PQ VV D HPGY+S ++A LP + Sbjct: 420 LGQYVGDLKNVRTMDTYLKVIDHLKELFEIEPQVVVTDKHPGYLSHRFAYSTGLPVIELQ 479 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH AHA + + E+Q IA+ DG G G++G LWG E L V + + L + Sbjct: 480 HHVAHALSVMEENQL----SKAIAIVYDGTGYGDDGTLWGSEVLLVENADYQRLFHFDYM 535 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSC 594 L GG+ A ++PWR + + + +A +G PLA Sbjct: 536 PLVGGEKAIEEPWRLAASLL--------QIDQAERFFGERGRNIALLGAKG-RFPLACGM 586 Query: 595 GRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDNQLDLATFWQ- 652 GR FDAV+A LG + +YEGE A L+ +A S + ++ + Q Sbjct: 587 GRIFDAVSALLGVC-SMATYEGEPAQKLQMIAENSLEKGNFADNITIHESTVSTRDIIQN 645 Query: 653 --QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + LN +N + FH+ +A+ ++ + +V SGG N +L + Sbjct: 646 IVELLNKGYEINDISRIFHNTVAELTVRMVIK----FDWENVVLSGGSFQNNILYKSVRD 701 Query: 711 YLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L + + +P D G++LGQ R Sbjct: 702 RLEKLGLKVFRNRQVPMNDNGIALGQIAYVLRR 734 >UniRef50_Q7M9N8 TRANSCRIPTIONAL REGULATORY PROTEIN HYPF n=1 Tax=Wolinella succinogenes RepID=Q7M9N8_WOLSU Length = 713 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 253/712 (35%), Positives = 359/712 (50%), Gaps = 36/712 (5%) Query: 51 REDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATC 109 + E F+ + Q+ P A+IDS + E T F IR S G + D + C Sbjct: 8 QNTLEEFIQAIRQNKPRNAKIDSFKVESDEKLVGYTSFEIRDSVNMGGKCAILPADTSIC 67 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 P CL EM+ P +RRY YPFINCT+CGPR+TII+ +PYDRP T MAAF +CP C KEY DP Sbjct: 68 PDCLREMHDPKDRRYLYPFINCTNCGPRYTIIKELPYDRPKTSMAAFEMCPECQKEYNDP 127 Query: 170 LDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 RRFHA+P +CP CGP L AE A++ +K G IVA+KGIGGFHL Sbjct: 128 TSRRFHAEPNSCPHCGPKLTLYRSNGTPLAEGAKAIETLCKLIKKGHIVAVKGIGGFHLV 187 Query: 228 CDARNSNAVATLRARKHRPAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKK 281 CDA + V LR RK RP KP AVM L + +P PIVL+ K+ Sbjct: 188 CDATKNRVVMELRERKKRPTKPFAVMFRSVFEIGKCTELSPIEEATILSPERPIVLISKR 247 Query: 282 YVPEL------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE 335 L CD +AP + +GV LP +PL LL+++ + PLV TS NLSG+P + Sbjct: 248 RPHRLEKFLISCDGVAPRVGTMGVFLPYSPLHSLLMEQAKIPLVFTSANLSGEPLIRDFK 307 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVP 392 + L G+ D +L H+R+I+ DDSVV +++RR+RGY P + LP + Sbjct: 308 ELCEKLSGVFDYYLDHDREILNPCDDSVVTIQNNKFQVIRRARGYAPSNVLLPFELEEG- 366 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 VL LGA K+T L G A+LS H+GDL + + + + ++Q IY+FTP+ +V D Sbjct: 367 -VLALGAQQKSTLALAFGSNAILSPHIGDLDNPSSESYFHQTREVLQGIYEFTPKIIVSD 425 Query: 453 AHPGYVSSQWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGA 511 HP Y S++WA ++ + V HH+AH + L+EH+ ++ + DG G G++G Sbjct: 426 KHPDYESTRWALKQKDSQVLQVQHHYAHMLSLLSEHKVK---EKILGVIWDGTGYGDDGR 482 Query: 512 LWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETA 568 +WGGE ++ E G L GG+ A K+P + L+ + + Sbjct: 483 IWGGEFFVGDFHGYERAGHFKEFRLLGGESAIKEPKKLALSLMFDLYGKEALNLKHPVVN 542 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 S L + ++GIN+PL+SS GR FDA+AA +G +++EGE LE L Sbjct: 543 SFSHDELETLYKMHQKGINSPLSSSVGRLFDAMAAMIGVVD-RVTFEGECGMVLEGLYNP 601 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 + +D+ L + A F + LA + R Sbjct: 602 DFE-AERYPYLVQEGVVDIHPMLLAILEGGEEASLVATKFINTLAHIALEVARIHR---- 656 Query: 689 ITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 + FSGGV NR L ++ + +P DGG++LGQ A Sbjct: 657 -LPVGFSGGVFQNRELCTKIERLFQNEGLPYYMHEKIPCNDGGIALGQVAFA 707 >UniRef50_A3DJT3 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Clostridium thermocellum RepID=A3DJT3_CLOTH Length = 753 Score = 892 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 252/765 (32%), Positives = 370/765 (48%), Gaps = 40/765 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFL 58 K+ S ++ + G VQGVGFRPFV +A++ + G V N G VE+ L+ E FL Sbjct: 4 GKSKSITKRITVSGIVQGVGFRPFVHNIAKKHGIPGTVRNIGGLVEIILQSSEEKYNEFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 L + P + I ++E E + F I +S + I PD C +C E+ T Sbjct: 64 QDLKANAPVGSEITNIETEDIKERE-FDGFRIIESKDDEEISIIPPDLPVCESCERELFT 122 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 +RR+ PFI+C CG R+TII +PYDR T M F +CPAC +EY P +RRFHAQ Sbjct: 123 GTDRRFLNPFISCMSCGARYTIIEELPYDRHNTTMRDFDMCPACREEYTSPRNRRFHAQT 182 Query: 179 VACPECGPHLEWVS--HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 ++C +CGP+L + G ++ A AA ++ G I+A+KGIGG+H AC + V Sbjct: 183 ISCNDCGPYLIFNDLTGGSELTEKDAFHAAANIIESGGIIAVKGIGGYHFACSPFLEDTV 242 Query: 237 ATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR K R AKP A+M D + + +LL + A PIVL+ K + Sbjct: 243 LRLRELKGREAKPFAIMFESVDSIRKYCVVSEKEEELLKSKARPIVLLYLKNNS-MAPSA 301 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 G LP PL LL++ PL+MTS N+S KP + + L+ + +G L Sbjct: 302 CQGSIYCGAFLPYTPLHMLLVKRCG-PLIMTSANISDKPIIKDDSEMLSLKSPLLNGVLY 360 Query: 351 HNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 + R IV+ +DDS VV S +++RRSRGYVP + L K++ + G+DLK FCL Sbjct: 361 NKRRIVRSVDDSVAKVVANSPQLIRRSRGYVPYPVFLKNRKKDLQ-IFAAGSDLKAAFCL 419 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 + AV+SQ+ GDL + + +++ + R + ++ TP V D HP Y SS++A + Sbjct: 420 YKNGNAVMSQYFGDLEEKTVLERYKASFRDLCHLLKITPDIAVCDMHPNYHSSRFAENLG 479 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HHHAH A+ +AEH VI + DG G G +G +WGGE L E + Sbjct: 480 IPLTYVQHHHAHVASVMAEHHLK---EQVIGVAFDGTGYGTDGKIWGGEFLICEGAEFKR 536 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + L + + GGD + + + L + V+ + ++ A++ IN Sbjct: 537 VAHLRYIPVLGGDSSMRDAAKTAACFLLNLGLD-------QYVKDERKDIIKAALKNNIN 589 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-------SCHGVTHPVTMPR 640 SS GR FDAV++ L YEGE A LE A + + Sbjct: 590 TVPTSSMGRLFDAVSSLLEIQYENR-YEGECAAMLEKEAVLALRHKIEPKKLAFEIKRKS 648 Query: 641 VDNQLDLATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 ++D + L + A FH A+A + + I T+ SGGV Sbjct: 649 DLIEIDPKPMLKSMCHLQNKDDTGSLALGFHYAVADMILEVCEIIRAEQKINTVALSGGV 708 Query: 699 IHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGVIAAAR 741 N LL R L D F + + S+P DG + LGQ I R Sbjct: 709 FQNTLLMERTLKILRDRHFNVYYNMSVPPNDGSIGLGQTFIGLVR 753 >UniRef50_Q1IT71 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT71_ACIBL Length = 740 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 285/748 (38%), Positives = 382/748 (51%), Gaps = 37/748 (4%) Query: 16 KVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCPPLARID 72 VQGVGFRPFV++LAQ +L G V N GVE+ L E F+ +L PP A I Sbjct: 1 MVQGVGFRPFVYRLAQTHHLAGWVRNGEQGVEIFLEGAEPSVERFVEELETEAPPAASIS 60 Query: 73 SVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINC 131 VE +P + +F IR+S ++ PD C CL E+ P +RRY YP+INC Sbjct: 61 QVEVDPAKP-EGFLDFAIRESERIDRPTVRVSPDLPVCDECLRELFDPADRRYLYPYINC 119 Query: 132 THCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWV 191 T+CGPR+T++ +PYDRP T M +PL C EY DP +RRFHAQPVAC ECGP Sbjct: 120 TNCGPRYTVVLGLPYDRPKTTMKDWPLDAYCRGEYGDPANRRFHAQPVACAECGPTYFLQ 179 Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLA 251 E AA++ L+ GKI+A+KG+GG+HLACDARN NAV LR RK+R KP A Sbjct: 180 IGDERIFGAAAIERTAEILRDGKILAVKGLGGYHLACDARNGNAVRALRERKYRKEKPFA 239 Query: 252 VMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 VM + L + R+LLT A PIVL K +AP+ +E+GVMLP P Sbjct: 240 VMARDVEIAAQIVELSNETRELLTGIARPIVLARAKQQF---PGVAPENHELGVMLPYTP 296 Query: 306 LQHLLLQELQCP--LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 L HLL P LVMTS N S +P A + A+ L GIAD FLI +R I +R+DDSV Sbjct: 297 LHHLLF-ASGAPEVLVMTSANRSSEPIAYEDADAIESLVGIADAFLIGDRPIARRVDDSV 355 Query: 364 VRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 R +LRR+RGY P A+A P + P+L LGADLKN LV QA +SQH+G Sbjct: 356 ARVGAYGPAILRRARGYAPGAVATIPCER---PILALGADLKNALTLVVDGQAFVSQHIG 412 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQWAREMNL-PTQTVLHHH 477 DL + E +R + +Y+ +VHDAHP Y ++ A ++ V HH Sbjct: 413 DLEHYTAFQAFEETIRDLLAMYEVKMDEVLLVHDAHPQYRTTLHAAQIAAKKKVAVQHHR 472 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECEHLGGLPAVAL 536 AH A+ LAE V+ ++ DG G G++G +WGGE + E + L L Sbjct: 473 AHIASVLAERGEWNRC--VVGVSFDGTGWGDDGTVWGGEIFAGSVHEGFERVAHLRPAVL 530 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGR 596 PGGD AA+ P + + + + + + + + + +S GR Sbjct: 531 PGGDAAAEFPVQAAAGFLAQL-GDLPDLCAAPFNFPERFRAARELVTKNVRCFGTTSMGR 589 Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN 656 FD AA +G T +YEG+AA +E LA P D +LD + Sbjct: 590 LFDTAAALIGFTRET-TYEGQAAIWVEQLARRTAHRD-GFEFPYTDGELDFRPLLTAVIQ 647 Query: 657 W---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 + A F +A G + +R +G T+V SGGV N LL L L Sbjct: 648 SRLTGVALETIARRFQVGVAHGISECLRTICKEQGAKTVVLSGGVFQNELLLGDLKPQLD 707 Query: 714 --DFTLLFPQSLPAGDGGLSLGQGVIAA 739 + + +P DGG+SLGQ +AA Sbjct: 708 VLGLEVWTNRMVPTNDGGISLGQAAMAA 735 >UniRef50_C9LW94 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Clostridiales RepID=C9LW94_9FIRM Length = 787 Score = 889 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 286/794 (36%), Positives = 393/794 (49%), Gaps = 58/794 (7%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 MAK + +I G VQGVGFRPFV + A+ L + GDVCN G VEVR + + F Sbjct: 1 MAKKVLQTSRFKIFGIVQGVGFRPFVSRTAKALGITGDVCNKGSYVEVRAQGTKDALQDF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMN 117 +L + P A I + ++ + +F I +S + + + PD A CP C +E+ Sbjct: 61 RKKLEKEPPERAVILKILQDSTEKAPFFHDFQIIESAHESGDVFVSPDIAICPKCQSELF 120 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 +RRY +PFINCT CGPR TI+ AMPYDR T M AFP+CPAC EY RR+ AQ Sbjct: 121 DKSDRRYLHPFINCTSCGPRLTILDAMPYDRERTSMGAFPMCPACRYEYTHAETRRYDAQ 180 Query: 178 PVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 PV C +CGPH+ + G AA+ A L+ G IVA+KGIGGFHLACDARN AV Sbjct: 181 PVCCNDCGPHVYLL--GGEERDHAAITRARHVLQAGGIVAVKGIGGFHLACDARNEAAVQ 238 Query: 238 TLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR K RP KP AVML D + DA L PI+L++K ++ +A Sbjct: 239 RLREHKSRPQKPFAVMLRGLDAVRRECRLSDAQEAHLDNHQKPIILLEKSGSGKIAASVA 298 Query: 292 PDLNEVGVMLPANPLQHLLL------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 P + +GVMLP PL LL + LVMTSGN SG P +E AL L IA Sbjct: 299 PAMPSLGVMLPYTPLHLLLFSLPDELADFTDCLVMTSGNPSGAPICRMDEDALDALSSIA 358 Query: 346 DGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L H+R+I R DDSV+ + M+RRSRGY P L L F++ VL +G +LK Sbjct: 359 DLILSHDREIRLRADDSVMDFYDGAPYMIRRSRGYAPLPLMLSADFQD--SVLGIGGELK 416 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFCL + S +LGD+SD R+ L M+ + TP V D HP Y +S++ Sbjct: 417 NTFCLAKNSLFYPSPYLGDMSDLRTLRALRQTLPRMERLLAITPAAVAADLHPRYETSRF 476 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A + LP V HHHAH + +AE+ VI ++ DG G G +G +WGGE + Sbjct: 477 AETLGLPIFKVQHHHAHVLSVMAENDHLS---PVIGVSFDGTGYGTDGTIWGGEIMLATT 533 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQ---QQNWSVLA 579 R+ + L L GGDLAA++ WR ++ + + + ++ + + Sbjct: 534 RDFQRLASLAPFFHAGGDLAAREGWRLAVSLLHLYCGREDALLHSKKLGLATEKEAASVI 593 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV------- 632 +E G++ +++S GR FDAV+A LG + +YEGEAA L+ A + Sbjct: 594 FQLENGLHTTISTSAGRLFDAVSALLGIRRIS-TYEGEAAVYLQFAAEAAEKAGNSAQAD 652 Query: 633 ---------------THPVTMPRVDNQL-----DLATFWQQWLNWQAPVNQRAWAFHDAL 672 + D + DL Q+ + A AFH L Sbjct: 653 ALLARWKADGTLQATPAESAITITDGRFLLTSNDLFCHLLQYRLQNVSSDLLALAFHRGL 712 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGL 730 A + M G +T +GGV N LL + L F +L +P DGG+ Sbjct: 713 AAAIRDACKNAREMTGCSTAALTGGVFQNTLLLRLTQNALKKDGFHVLHHSIIPPNDGGI 772 Query: 731 SLGQGVIAAARWLA 744 ++GQ + A Sbjct: 773 AVGQALFAMQCLKD 786 >UniRef50_C9PDU4 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PDU4_VIBFU Length = 766 Score = 889 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 280/766 (36%), Positives = 388/766 (50%), Gaps = 52/766 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPP 67 + I+G+VQGVGFRPFV++LA + L G V ND GV + ++ + + F +L PP Sbjct: 6 IEIKGQVQGVGFRPFVYRLAIEHQLKGWVINDARGVRIDVQGEQRQFDAFYRELLIQTPP 65 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 LAR+D+V P + F I S ++ + PD A C C E+ P R Y Y Sbjct: 66 LARVDNVALRPLDPT-DFAAFQILSSSDDAEISVSVPPDQAICMDCRRELFDPNSRFYHY 124 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCT+CGPRFTII+A+PYDR T MA F LCPAC + Y++P+DRR+HAQPV+C CGP Sbjct: 125 PFINCTNCGPRFTIIKALPYDRHQTSMADFKLCPACARAYQNPMDRRYHAQPVSCAHCGP 184 Query: 187 HLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 + +S + A+ AA++ A QL G ++A+KG+GGFHL CDA + AVA LR KH Sbjct: 185 SVTLLSPQQTCIAKAHAAIERAAEQLIAGGVIALKGLGGFHLVCDATSLQAVARLRELKH 244 Query: 245 RPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKY-----VPELCDDIAPD 293 R KPLAVM+ Q L + A+PIVL+ K + D++APD Sbjct: 245 RARKPLAVMVSDVAQAKHYVQGEALEWQTLKSQASPIVLMHKAEHTDAGRAPVADNVAPD 304 Query: 294 LNEVGVMLPANPLQHLLLQELQC-----PLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 ++ +GVML PL LL+ LQ PLVMTS N+SG P A +Q A D Sbjct: 305 VDCLGVMLAYTPLHLLLIDALQQRGCFAPLVMTSANVSGLPLATEAQQVFAMFGASLDSV 364 Query: 349 LIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L HNR IV DDS+V+ S +LR +RGY P + P P L +GA K+T Sbjct: 365 LDHNRPIVHACDDSLVQLAAGSMRVLRMARGYAPLSF---PLANRAPATLAVGAQQKSTV 421 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE 465 Q LS +LGDL+D Q ++ +A ++Y + + V DAHPGY S+QW E Sbjct: 422 AFAVRNQWFLSPYLGDLTDLDTQQRFVDATHYFPHLYQASTERWVADAHPGYFSTQWVNE 481 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 V HH+AH + +AE Q G V+ ++ DG G G++G +WGGE + + Sbjct: 482 QTSSALHVQHHYAHILSVMAESQL---NGPVLGVSFDGTGAGDDGTVWGGEVMIADRLGY 538 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARA 581 + + L L GG+ A ++P R L A L + + + A+ + L Sbjct: 539 QRIAHLRPFRLIGGEQAIREPERVLYALLLELMTPAEIQQLHLPAFAAWSDSRFQNLFHL 598 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRV 641 +PL SS GR FDA A LG T YEGE+ +E A +++P Sbjct: 599 WRNAERSPLCSSVGRLFDAWACLLGFV-TTPDYEGESGLQMENAARQAGEHQVALSLPWR 657 Query: 642 DNQLDLATFWQQWLNWQAPVNQRAWA---------FHDALAQGFAALMREQATMRGITTL 692 D QLD A QQ L + + F ALA+ + ++ A + L Sbjct: 658 DQQLDWAPALQQSLERGLASDDISAKRWACVCSDAFIGALAKAVIDIAQQHANL----PL 713 Query: 693 VFSGGVIHNRLLRARLAHYLAD--FTLLFPQSLPAGDGGLSLGQGV 736 V SGGV NR L + D + +P D G++ GQ Sbjct: 714 VLSGGVFQNRCLLDAIDAMYPDSACPFITGSHIPVNDSGIAAGQLW 759 >UniRef50_A4EA36 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA36_9ACTN Length = 823 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 313/818 (38%), Positives = 393/818 (48%), Gaps = 82/818 (10%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 V + + G VQGVG RPFV++ A + G V N GDGV + + F+ L Sbjct: 1 MRHVHIHVTGIVQGVGMRPFVYREAMAHGICGWVLNAGDGVHIEAHAPADALDAFVAALS 60 Query: 63 QHCPPLARIDSVEREPFIWSQ----LPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMN 117 +H P AR++ VE + F I S T T + PD ATC CL E+ Sbjct: 61 EHAPAAARVEYVEVVDLAANGWDAANEQGFRIVASQDQTAHTTLVSPDIATCNDCLRELF 120 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RRY YPFINCT+CGPRFTIIR++PYDR T M FP+CP C EY DPLDRRFHAQ Sbjct: 121 DPADRRYHYPFINCTNCGPRFTIIRSLPYDRAATSMDCFPMCPRCAAEYADPLDRRFHAQ 180 Query: 178 PVACPECGPHLEWVSH----------------GEHAEQEAALQAAIAQLKMGKIVAIKGI 221 P AC +CGPH+ W +A ++ + L G IVAIKG+ Sbjct: 181 PDACFDCGPHITWREAVNGDACGNSSATPAVGTTREASDAIIERCVELLASGGIVAIKGL 240 Query: 222 GGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPI 275 GGFHLACDA N AVA LR RK R KPLAVM+ + DA R+LL PI Sbjct: 241 GGFHLACDAANEQAVAELRRRKRRSNKPLAVMVRSLADAGRLCHIDDAERELLAGSIRPI 300 Query: 276 VLVDKK----------YVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQ----CPLVMT 321 VL+ ++ L +A DL E+GVMLP PLQHLLL + LVMT Sbjct: 301 VLLRRRAVCESNGGSPDAFALAPSVAHDLPELGVMLPYTPLQHLLLAAAEACGMHALVMT 360 Query: 322 SGNLSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRG 376 SGNLS +P ++ A L GIAD L ++R I+ R DDSVVR +RR+RG Sbjct: 361 SGNLSEEPIETDDDLAWEHLVAAGIADALLGNDRAILSRYDDSVVRVVDGAIMPVRRARG 420 Query: 377 YVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQ-----AVLSQHLGDLSDDGIQMQW 431 Y P L LP VL G K T L R +SQH+GD+ + G W Sbjct: 421 YAPQPLPLPALDGAPSCVLACGPQQKATIALAREGTNGEAPCFVSQHIGDVENGGTFDAW 480 Query: 432 REALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAE- 486 A +++++D P + D HP Y+S QWARE NLP V HHHAH A+ +AE Sbjct: 481 NAARTRLEDLFDLAPAALACDVHPSYLSGQWAREQARKCNLPLVEVQHHHAHIASVMAEA 540 Query: 487 --HQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAK 544 V+ + DG G G +G +WGGE L + E L ALPGG + + Sbjct: 541 IAAGQLTTDARVLGIAFDGTGAGADGTIWGGEFLVASLGGFERAAHLRTWALPGGAASVR 600 Query: 545 QPWRNLLAQCLRFVPEW--QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVA 602 RN A S+ +Q SV A IERGIN+P SS GR FDA A Sbjct: 601 DARRNAFALLSELGLLEHPGAARLLDSLDEQTRSVTATMIERGINSPRTSSMGRLFDAAA 660 Query: 603 AALGCAPATLSYEGEAACALEALAASCHG---VTHPVT----------MPRVDNQLDLAT 649 A LG +YEGE A LEA A P LD Sbjct: 661 AILGICD-KATYEGEPAIELEAAAWRALDNEIARFPDDNAGYFASGPSWLDGPYVLDQKA 719 Query: 650 FWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 ++ L A ++ A FH A+A+ A + E GI T+ SGGV NRLL Sbjct: 720 LFEALLGGIEAGASADRLALDFHVAVARSSARIASEICVHEGIDTVALSGGVFMNRLLLQ 779 Query: 707 RLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 L L T+L P S+P DG ++ GQ +A R Sbjct: 780 LLTRELKSMGLTVLVPHSVPVNDGCIAYGQAAVARTRL 817 >UniRef50_Q1ZUD0 Hydrogenase maturation protein HypF n=2 Tax=Photobacterium RepID=Q1ZUD0_PHOAS Length = 796 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 274/802 (34%), Positives = 391/802 (48%), Gaps = 68/802 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M N + + I G VQGVGFRPFV+QLA Q L G V ND +GV++ ++ +T F Sbjct: 1 MTDNIARQY-IHITGIVQGVGFRPFVYQLATQHALVGSVINDSEGVKIDVQGSLDTLTIF 59 Query: 58 LVQLYQHCPPLARIDSVEREPFIWS---QLPTEFTIRQST-GGTMNTQIVPDAATCPACL 113 QL PPL+RID V + P F I QS + I PD C AC Sbjct: 60 TSQLIDQAPPLSRIDDVAIRTLSLWSELEKPNTFGIEQSQCRESTTVSISPDQGLCDACK 119 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 +++ P R ++Y F NCTHCGPR++II+A+PYDR T M F LCP C + Y++P+DRR Sbjct: 120 RDISNPDSRYFQYSFTNCTHCGPRYSIIKALPYDRAVTSMQDFLLCPDCAEAYQNPVDRR 179 Query: 174 FHAQPVACPECGPHLEWVSHGEH----------AEQEAALQAAIAQLKMGKIVAIKGIGG 223 +HAQP++C CGP + + A ++ A++ ++K G+IVA+KGIGG Sbjct: 180 YHAQPISCDCCGPWVTLYDAQQRVKSSAELPLVATKQTAIEQLAQKIKDGEIVAVKGIGG 239 Query: 224 FHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLP-------DAARQLLTTPAAPIV 276 FHLACDA N+ AVA+LR K+R +KPLA+M D + DA + L A PIV Sbjct: 240 FHLACDATNAQAVASLRKLKYRQSKPLAIMAAS-DDIAQQFVEGCDAEWKALAAQARPIV 298 Query: 277 LVDK----------KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP-----LVMT 321 L++K + L +++AP++ +G+MLP PL +LL EL+ LVMT Sbjct: 299 LMNKRLDIVAEEVTRTGGVLAENVAPNVPYLGIMLPYTPLHYLLFDELKAIGATSTLVMT 358 Query: 322 SGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYV 378 S NLSG P A Q G G L HNR IV DDS+V +G +LR +RGY Sbjct: 359 SANLSGMPIATELAQVCTQFSGKISGILDHNRPIVSACDDSLVHYAGGKIRVLRMARGYA 418 Query: 379 PDALALPPGFKNVPPV-LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRL 437 P + + ++ + L LGA+ K+T L +Q ++S ++GDL D +++++E Sbjct: 419 PVSHFVTGSKQSTGNITLALGAEQKSTIGLALPQQWLISPYIGDLDDLDTELRYQETFNH 478 Query: 438 MQNIYDFTPQYVVHDAHPGYVSSQWAREMNL------PTQTVLHHHAHAAACLAEHQWPL 491 + +Y+ PQ +V D HP Y SSQ+A + P V HHHAH A +AEH Sbjct: 479 LTTLYNVKPQQLVCDKHPNYHSSQFAEKYQAKAHLITPLLKVQHHHAHVLAVMAEHNLT- 537 Query: 492 DGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLL 551 V+ T DG G G++ +WGGE L + + +G L L GG+ A K+P R L Sbjct: 538 --EQVLGFTFDGTGWGDDHTVWGGEVLLSTPQSYQRVGHLRQFRLIGGEKAIKEPARLLF 595 Query: 552 AQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGC 607 A L S ++ L + G +P SS GR DA + LG Sbjct: 596 ALLLECYSVDAIKAMQLSAFKEWSDVYFNNLYQLWLTGSQSPYTSSMGRLIDAWTSLLGL 655 Query: 608 APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQ---QWLNWQAPVNQR 664 + YEGE LE A + +D ++ L+ A + Sbjct: 656 VD-RVDYEGECGLKLEQAAMKDRCHQPISFAVDANGVIDWQPLFEYALPLLSLVADDYRP 714 Query: 665 AWA---FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY--LADFTLLF 719 AW H + A ++ +V GGV NR+L + +L Sbjct: 715 AWRNCLAH-SFISAIADVIVTIGQTYKPLPIVLGGGVFQNRVLVDEVFEKASAHSLSLFC 773 Query: 720 PQSLPAGDGGLSLGQGVIAAAR 741 ++LPA D +S GQ A + Sbjct: 774 GEALPANDASISAGQLWFAIHQ 795 >UniRef50_Q58123 Probable carbamoyltransferase hypF n=10 Tax=Methanococcales RepID=HYPF_METJA Length = 766 Score = 887 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 265/760 (34%), Positives = 395/760 (51%), Gaps = 35/760 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHC 65 V+++++G VQGVGFRPFV+++A++ NL G V N G+ VE+ + D F+ L Sbjct: 12 VRIKVKGIVQGVGFRPFVYRIAKKNNLKGYVKNMGNYVEILIEGKKEDIRNFINDLKNKK 71 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPGERR 123 PPL+RID ++ E + +F I +S I D A C CL EM +RR Sbjct: 72 PPLSRIDKLDIEEIKGIEEFDDFYIIKSENAKDEEEGTIPADVAICDDCLKEMLDKNDRR 131 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPFI CT+CGPRFTI+ +PYDR T M FPLC C +EY++PLDRRFHAQ CP Sbjct: 132 YRYPFIACTNCGPRFTIVEKLPYDRENTSMRDFPLCEKCLEEYKNPLDRRFHAQATCCPI 191 Query: 184 CGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + E AE++ A++ + L+ G I+AIKGIGG HLAC + V LR R Sbjct: 192 CGPKVFLSDGKEIIAEKDEAIRETVKLLEEGHILAIKGIGGTHLACKVGEDDVVLELRKR 251 Query: 243 KHRPAKPLAVMLP-----VADGLPDAARQLLTTPAAPIVLVDKKYV-PELCDDIAPDLNE 296 RP +P AVM + + + L + PIV++ K + +L+ Sbjct: 252 LGRPTQPFAVMSKIEYTELFAEFDEDEKNALLSLRRPIVVLKKSQDYDKYFSKYVSNLDT 311 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVM P + L +LL + + VMTS NL G P N++ L L GIAD FL+HNR IV Sbjct: 312 IGVMFPYSGLHYLLFDK-EIAYVMTSANLPGLPMVKDNDEILKKLNGIADYFLLHNRRIV 370 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R DDSVV++ + LRRSRG+ P+ + + LC+GA+L +T C+V+ ++ Sbjct: 371 NRCDDSVVKKVADRLVFLRRSRGFAPEPVKVNINNNKNI--LCVGAELNSTACIVKRDKF 428 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAREM----NL 468 L+Q++G+ S R+A+ + + + +V D HP + S++ A E+ Sbjct: 429 YLTQYIGNTSKYETFCYLRDAINNILRLTNTNKIDAIVCDLHPQFNSTKLAEELSEKFGA 488 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHL 528 V HH AHA + L ++ D I L+LDG+G G +G +WGGE L + E + Sbjct: 489 EIFRVQHHFAHAYSLLGDNN---YFDDAIILSLDGVGYGLDGNIWGGEVLLFKDGKMERV 545 Query: 529 GGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW--QNYSETASVQQQNWSVLARAIERGI 586 G L GGDLA K P R LL+ + + E ++ +L +E+ + Sbjct: 546 GHLEEQYQLGGDLATKYPLRMLLSILYKAIGEEAFDFIKRYNFFSEKELRLLKFQLEKKL 605 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 N P+ +S GR DAV+A LG +Y+GE + LE +A G + +N L+ Sbjct: 606 NCPITTSTGRVLDAVSALLGICFEK-TYDGEPSIRLEPVANRFKG-DINIEPKIKNNILN 663 Query: 647 LATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 + L + A H +A G + ++ + GI T+ +GGV +N++ Sbjct: 664 TTELIYKSYEMLLNNENKEKIAHFAHIYIADGLFEIAKKISNKFGINTIGITGGVSYNKI 723 Query: 704 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + R+ + F ++ Q +P GDGG+S GQGV + Sbjct: 724 ITERIMNNAKREGFNFIYHQRVPNGDGGISFGQGVAYILK 763 >UniRef50_B2UKV0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKV0_AKKM8 Length = 775 Score = 887 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 279/780 (35%), Positives = 372/780 (47%), Gaps = 49/780 (6%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLV 59 + + ++ I G VQGVGFRP V++LA + L G V N GVE+ + +P E F Sbjct: 7 EQAAAALKFEIAGMVQGVGFRPHVYRLAVRHGLKGFVRNTESGVEIHVEGEPGAPERFWT 66 Query: 60 QLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQI-VPDAATCPACLAEMNT 118 L P AR+ VER + EF I +S + +PD A CP CL EM+ Sbjct: 67 ALMDGLPEHARVYGVERTVCEPA-GFEEFRIEESDSTPGGVPVMLPDLAPCPECLEEMHD 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P RRY YPF NCTHCGPR++II MPYDR T M F +CP C +EY+D DRRFHAQP Sbjct: 126 PSSRRYHYPFTNCTHCGPRYSIIETMPYDRARTSMKGFRMCPECRREYQDVEDRRFHAQP 185 Query: 179 VACPECGPHLEWVSHGEHAEQ-----EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 + CP CGP ++ + + L G IVA+ G+GGF L DA + Sbjct: 186 IGCPSCGPSVKVLFSDGSELGFGHGFDTPAAQVAWVLADGLIVALLGVGGFQLLADASSE 245 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 AV LR K R AKP AVM+P L + R+LLT+PAAPIVL +L Sbjct: 246 AAVRRLRRLKERDAKPFAVMVPDVAAAERLCRLSEEERRLLTSPAAPIVLARGGKDVDLA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 + VG+MLP++PL LL+ PLV+TSGNLSG+P +S E+ L L +AD Sbjct: 306 PSVCMFSRFVGIMLPSSPLHALLMDVWGKPLVVTSGNLSGEPLCVSVEEGLEKLGHVADV 365 Query: 348 FLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 FL+H+R +V+ +DDSVVR + M+RR+RGY P + P +L LGA LKNT Sbjct: 366 FLVHDRPVVRPVDDSVVRVTDGRAMMVRRARGYAPRPVWRTSA--AAPDMLALGAGLKNT 423 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG----YVSS 460 C ++ AV+SQHLGDLS + + + D PQ + DAHP + Sbjct: 424 ICWLKRGVAVMSQHLGDLSSAASLNAFERTVEALGRTLDAVPQVIAVDAHPDGPTFALGR 483 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 + AR+ N V HH AH AC E++ P + + DG G G +G +WGGE + Sbjct: 484 RLARKWNATVVPVQHHQAHVLACAVENETPF---PALGIAWDGTGFGTDGTVWGGEFFVL 540 Query: 521 NYRE-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP---EWQNYSETASVQQQNWS 576 + L LPGGD A ++P R + + P + + + Sbjct: 541 EEEGEPRRVARLRPFLLPGGDEAVREPSRCACSLARQMGPWRTYGLDKRLERGMPVRKRE 600 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV---- 632 VL + R I+ P +SS GR FDAVA G EG AA LE+ AA G Sbjct: 601 VLEAMMARNIHCPSSSSMGRLFDAVAFWCGF-DGAAGCEGHAAMMLESWAAEASGEKMPG 659 Query: 633 -THPVTMPRVDN--QLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATM 686 + M +LD + L A FH++L + Sbjct: 660 DAYEWVMHEEGGLLELDWRPLMKSVDEDLLEGVSRGCIARKFHESLVNLVFDVAERFC-- 717 Query: 687 RGITTLVFSGGVIHNRLLRARLA--HYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 + LV GG N L LA L PQ +P DGG+SLGQ +W Sbjct: 718 --LDRLVLGGGCFQNAFLLEGLAGMAQSRRCQLSLPQRVPCNDGGISLGQVAAVVRQWKG 775 >UniRef50_D2LGK3 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGK3_RHOVA Length = 823 Score = 887 bits (2293), Expect = 0.0, Method: Composition-based stats. Identities = 355/820 (43%), Positives = 451/820 (55%), Gaps = 79/820 (9%) Query: 1 MAK-NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PET 56 MA + GV +R+RG VQGVGFRP VW++A++L L GDV ND +GV +R + Sbjct: 1 MADADDIKGVSIRVRGLVQGVGFRPHVWRIARELWLTGDVLNDAEGVLIRAFGPRAALDA 60 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEM 116 F+ L PPLAR++ +E P P F I +S G + T IVPDAATCPACLA++ Sbjct: 61 FIAALADRAPPLARVECIETAPL-NGPAPDMFRIVESGAGDVTTGIVPDAATCPACLADI 119 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P RRYRYPF NCTHCGPR +I+RA+PYDR T MAAF +CPAC EY DP DRRFHA Sbjct: 120 RDPENRRYRYPFTNCTHCGPRLSIVRAIPYDRATTSMAAFEMCPACRAEYEDPADRRFHA 179 Query: 177 QPVACPECGPHLEWVSHGEHAEQ----EAALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 QP ACP CGP L A ++AA A ++ G IVAIKGIGGFHLACDA N Sbjct: 180 QPNACPVCGPRLWLEGADGAALPLRGARDEIEAAAALIRDGAIVAIKGIGGFHLACDAAN 239 Query: 233 SNAVATLRARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYV-PE 285 +AV LRA K R KPLA+M + R L + AAPIVL+ ++ P Sbjct: 240 EDAVTRLRAGKRRSGKPLALMARNVAMVTRYAHIAPPERAALESAAAPIVLLSRRADAPP 299 Query: 286 LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 L IAP +G MLP PL HLL++ L P+V+TSGN+S +P +I+N+ A L IA Sbjct: 300 LASSIAPGQTTLGFMLPYTPLHHLLMEALPGPIVLTSGNVSDEPQSIANDDARERLSEIA 359 Query: 346 DGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D FL+H+RDIV R+DDSVVR + +RR+RG A P F+ P VL +GA+LK Sbjct: 360 DAFLMHDRDIVNRLDDSVVRLAAGRVRTVRRARGLA-PAPLPLPLFQGAPAVLAMGAELK 418 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ- 461 +TFCL G +A++SQH+GDL D R L L + ++ F P V DAHP Y +++ Sbjct: 419 STFCLASGGRAIVSQHIGDLEDAATHADCRANLALYKRLFRFAPDVVAVDAHPDYHATRL 478 Query: 462 ---WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN--------- 509 A E LP VLHHHAH AA +AEH PLD V+ + DG+GMG++ Sbjct: 479 GEALAAERGLPIARVLHHHAHVAAVMAEHGEPLDATPVLGIAFDGLGMGDDVPDQPALEA 538 Query: 510 -----GA------------------LWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQP 546 G LWGGE L +YR C + V L GG A ++P Sbjct: 539 PHLSTGKLIDNKGERSDAFQRTHRPLWGGEFLVADYRACRRVASFAPVPLIGGAKAMREP 598 Query: 547 WRNLLAQCLRFVPEWQ------NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 WRNLLA + + + S + + + + + RG+NAP ASS GR FDA Sbjct: 599 WRNLLAHLDVALGWDEASARFGDLSILRRLAAKPVAPALQMMARGVNAPPASSAGRLFDA 658 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVT---HPVTMPRVDN----------QLDL 647 VAAALG +YEG+AA LEALAAS P+ ++ + +L Sbjct: 659 VAAALGICFDEATYEGQAAVELEALAASVRCRDFGRWPIAARKLPSRGMGEDGGPIRLGW 718 Query: 648 ATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 WQ L+ AP A FH LA A R A G+ +V GGV HNRLL Sbjct: 719 GELWQAVLDDLARDAPPAIVAARFHAFLADTVADTARALARRDGLRRIVLCGGVFHNRLL 778 Query: 705 RARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + LA F +L P PAGDG +SLGQ VIAAAR + Sbjct: 779 LEGVLERLAGDFEVLAPALCPAGDGAISLGQAVIAAARAI 818 >UniRef50_C1SM01 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM01_9BACT Length = 745 Score = 887 bits (2292), Expect = 0.0, Method: Composition-based stats. Identities = 256/747 (34%), Positives = 368/747 (49%), Gaps = 28/747 (3%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 ++++G VQGVGFRPF+++LA L G V N GVE+ + + E F + Sbjct: 1 MKTFNIKVKGIVQGVGFRPFIFRLAGTHGLKGFVTNSSSGVEIEVNGEKQQIEDFASDIQ 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 CPPLA I V E + + F+I S + T + PD A C C EM+ P +R Sbjct: 61 TKCPPLAHIIEVTIECIPFRE-FEMFSIEPSKITSGITLVPPDTALCDECAKEMDDPADR 119 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPF NCT+CGPR++II+ MPYDRP T M+ F +CP+C KEY DP DRRFHAQP ACP Sbjct: 120 RYNYPFTNCTNCGPRYSIIKKMPYDRPDTTMSKFRMCPSCQKEYDDPADRRFHAQPNACP 179 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP + + A+ A + G I+A+KG+GG+HL CDA V TLR Sbjct: 180 VCGPMVYL----GKNAGQDAIDHAAEIIDSGGIIAVKGLGGYHLICDATQDIPVKTLRNL 235 Query: 243 KHRPAKPLAVMLP--VADGLPDAA--RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 K RP KPLAVM D A +L +P APIV++ K + P VG Sbjct: 236 KKRPDKPLAVMCSYETIQKYCDDAPSLKLFCSPQAPIVIM-KVPDLPVSAFANPMSPNVG 294 Query: 299 VMLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 + P PL +L++ + L+ TSGN +P A +A L FL H R I Sbjct: 295 CIAPYTPLHRVLMKTCKSDFLIATSGNRKDEPIAKDEREAEKALSEFTSHFLHHTRPIHN 354 Query: 358 RMDD---SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAV 414 R+DD SVV ++RR+RG+ P + LP VL LGA LKNT + + A Sbjct: 355 RVDDSLVSVVDGMPYVMRRARGFAPYPVMLPSAVN--GCVLALGAHLKNTITIAKDNYAF 412 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 +SQ++GDL + + E + M+ +Y P VV D HP Y S+ +A + LP Q V Sbjct: 413 VSQYIGDLDNPDTCEFFEETIDKMKMLYGLEPDSVVCDMHPNYHSTGFAESLGLPVQRVQ 472 Query: 475 HHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAV 534 HH +H AC+AE+ +V+ + LDG G+G +G +WGGE L + R+ LP V Sbjct: 473 HHISHMMACMAENGLK---DNVLGVVLDGTGLGTDGTIWGGEFLLMKNRKISRPQHLPKV 529 Query: 535 ALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNWSVLARAIERGINAPLA 591 PG D AK P R L++ F + ++ + +++ + IE+ IN Sbjct: 530 MQPGMDGGAKNPGRMLISYLHHFGILERYMETLTKKLFIPEKDIKLTVSMIEKNINCIPT 589 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV-TMPRVDNQLDLATF 650 +S GR F+++ AA+ L +E +A +E LA S H V D ++ + Sbjct: 590 TSAGRLFESLGAAVTGVTKNL-FEAHSAMKMEGLAHSADRKYHKVTDTDSDDFYRNVFEY 648 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + A H + ++ + + +V SGGV N L L Sbjct: 649 TLNSVQANENPQIIAADIHSNFVKHIIFCIKNICNIEEVGDVVLSGGVFQNLFLTKELTK 708 Query: 711 YLADFTLLFPQSLPAGDGGLSLGQGVI 737 ++ + +++P D +SLGQ Sbjct: 709 -VSRLNIHRHKAVPPNDSCISLGQAYY 734 >UniRef50_Q1NVR2 Hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q1NVR2_9DELT Length = 820 Score = 886 bits (2290), Expect = 0.0, Method: Composition-based stats. Identities = 301/814 (36%), Positives = 391/814 (48%), Gaps = 84/814 (10%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCP 66 + RI G VQGVGFRPFV++LA++ L G V ND GV + Sbjct: 15 ARRRWRIGGVVQGVGFRPFVYRLAREHALAGRVYNDAAGVVIEAEGPAAALAAFGAALPA 74 Query: 67 PLARI----DSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGE 121 D V E Q + F I S G + PD ATC C E+ P + Sbjct: 75 QAPPAAVLADLVSEEMAP--QGGSAFRIEVSRQAGVPLAGVAPDLATCADCRRELFDPAD 132 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPFINCT+CGPR+TII +PYDRP T M F +CPAC EY +P +RRFHAQP AC Sbjct: 133 RRYLYPFINCTNCGPRYTIIEKIPYDRPHTSMGRFTMCPACQAEYDEPANRRFHAQPNAC 192 Query: 182 PECGPHLEWV-----------------SHGEHAEQEAAL---QAAIAQLKMGKIVAIKGI 221 P CGPHL+ + + A + ++ AA L+ GKIVAIKGI Sbjct: 193 PHCGPHLQLLLAQKMGTDLFFEPAALSTTDGVASKNKSVPIFAAARQLLRQGKIVAIKGI 252 Query: 222 GGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPI 275 GGFHLA DA N AVA LR RK R KPLA+M+ L + A + L +PA PI Sbjct: 253 GGFHLAVDAANQEAVANLRRRKGRQHKPLALMVGDLATARRLVQLDERAERELCSPARPI 312 Query: 276 VLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNE 335 +L ++ L +AP GVML PL HLLL + LVMTS N +P I + Sbjct: 313 LLALQQPEHGLAPAVAPGHGRFGVMLAYTPLHHLLLTDQLPVLVMTSANPGSEPLCIDDR 372 Query: 336 QALADLQGIADGFLIHNRDIVQRMDDSV--------VRES--------GEMLRRSRGYVP 379 +A+ L GIAD + H+R IV+ DDSV V + +RR RG+ P Sbjct: 373 EAIDRLAGIADAIVGHDRPIVRSNDDSVLFFSQPPAVDATAPLEPVAAPVFIRRGRGFAP 432 Query: 380 DALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQ 439 L P P +L +GA+LKNT CL ++AVLSQHLGDL + ++ + + Sbjct: 433 QVL---PLAGEGPALLGVGAELKNTVCLATADKAVLSQHLGDLQNLATYELFKRTIGDLA 489 Query: 440 NIYDFTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGD 495 ++ +PQ V D HP Y+SS+WAR+ LP V HHHAH AACLAEH P G Sbjct: 490 SLLAISPQAVACDLHPDYLSSRWARQWAREHRLPLLPVPHHHAHLAACLAEHHHP---GP 546 Query: 496 VIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL 555 I L LDG G G +G +WGGE L + G L + LPGGD A +PWR LA Sbjct: 547 AIGLILDGTGYGPDGTIWGGEILLGDVAASTRFGHLETMPLPGGDAAVAEPWRTGLAYLQ 606 Query: 556 RFVPEW-QNYSETASVQQ----------------QNWSVLARAIERGINAPLASSCGRFF 598 + + + + Q ++ + + IN PL SSCGR F Sbjct: 607 QAFADKIPDLPFLNESGENGDTIPVFQTGIPTYCQRQQMVLAMLAKKINCPLTSSCGRLF 666 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQQWLN 656 DAVAA G + YE +AA L LA + L + + Sbjct: 667 DAVAAICGVC-HRIDYEAQAAIELMELAGGLASPAFSYQIESRPAGIVLAIRPLVRDIAQ 725 Query: 657 ---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 V + FH L + F+A +R A G T+ +GGV+ N +L L L Sbjct: 726 AMAAGGDVATISRRFHYTLVELFSAGVRRAAAASGHQTVALAGGVMQNMVLLQGLRQSLQ 785 Query: 714 --DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 T+L PQ LP DG ++ GQ +A R +G Sbjct: 786 ASGLTVLVPQKLPPNDGAIAYGQVAVARQRIKSG 819 >UniRef50_B0LPC9 HypF n=3 Tax=Bacteria RepID=B0LPC9_DESVM Length = 860 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 304/854 (35%), Positives = 404/854 (47%), Gaps = 122/854 (14%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + + G+VQGVGFRPFV+++A L G V N GV + ++ + F L Sbjct: 14 VRRKFTVSGQVQGVGFRPFVYRIAADHALTGTVSNTAAGVFIEVQGPAASVDGFGHDLTH 73 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTM--NTQIVPDAATCPACLAEMNTPGE 121 PPLAR+ S + ++ F I S G I D ATC CLA+M+ P Sbjct: 74 KLPPLARVVSCTHQDIPVAEGEDGFRIVASGDGGAGHEVLISADVATCDDCLADMSDPAN 133 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPF NCT+CGPR+TI R +PYDR T MA FPLCPAC EY +PLDRRFHAQP AC Sbjct: 134 RRHLYPFTNCTNCGPRYTITRFIPYDRDKTSMACFPLCPACAAEYENPLDRRFHAQPNAC 193 Query: 182 PECGPHLEWVSHGEHAEQEA--------------------------------ALQAAIAQ 209 P CGP + +V A+QA Sbjct: 194 PVCGPRVWYVDGAPDGPAADTGYDAAPGSGRGDEPGCAPASDHGAGRPTGTPAIQALAEA 253 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDA 263 L G+I A+KG+GGFHLACDA + AV LR RKHRP KPLA+M+P + Sbjct: 254 LAAGRIAAVKGLGGFHLACDAASDAAVGELRRRKHRPHKPLAIMVPDLAAARRIVHVSPE 313 Query: 264 ARQLLTTPAAPIVLVDK------------KYVPELCDDIAPD------------------ 293 LL PIVL + + PD Sbjct: 314 EEALLAGRERPIVLCRALDGLAGGMHGVARPGDGSPLVLDPDAPRTPPPISPLISPLISP 373 Query: 294 -LNEVGVMLPANPLQHLLLQELQC--------PLVMTSGNLSGKPPAISNEQALADLQGI 344 VGVMLP PL H+LL+ LVMTSGN G+P + N +AL L I Sbjct: 374 DTPFVGVMLPYTPLHHVLLRLYGALLPEDRVPALVMTSGNAGGEPICLGNREALRRLSSI 433 Query: 345 ADGFLIHNRDIVQRMDDSVVRE-----SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 AD FL+H+RDI+ R DDSV R + + LRR+RG+ P + L + P VL +G Sbjct: 434 ADVFLLHDRDILIRTDDSVTRVNPATGAPQFLRRARGFTPRPVFLE---GDGPCVLAMGP 490 Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459 +LKNT C+ RG++A +SQH+GD+ + RE + I TPQ VV D HP Y++ Sbjct: 491 ELKNTLCVTRGDKAFVSQHIGDMHNLETLGFHREIAAHLPRILQVTPQAVVRDLHPDYMT 550 Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 + A + LP T+ HH AH A LAE++ G + L LDG G G++G +WGGE L Sbjct: 551 TAEAEQSGLPVLTLQHHFAHIHAVLAENRHD---GPALGLALDGTGHGDDGTVWGGELLY 607 Query: 520 VNYR--ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQ 572 V+ + + LG L + LPGG+ A ++PWR + Sbjct: 608 VDNVALDHQRLGRLARIPLPGGEAAIREPWRIAQGLLWHLGLHEPVTDGARPWPWLRDHA 667 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG- 631 Q ++L R +ERG+N PL SSCGR FDAV+A LG T++YEG+AA LE + Sbjct: 668 QAAALLPRLLERGVNTPLTSSCGRLFDAVSALLGLC-TTVTYEGQAAIRLEHAQDAVSPC 726 Query: 632 ---------VTHPVTMPRVDN-----QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQ 674 +P + + LD ++ + P + A FH + Sbjct: 727 GGSHDAFFTHAYPCPLRGARDGSDTLVLDTHALFRAVHDDWARGTPPGEVARRFHAGVVA 786 Query: 675 GFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSL 732 G A + A + + + SGG + N L L LA T+L LP GDG +SL Sbjct: 787 GLADMAAAVAGVMDVPVVALSGGAMQNLTLSVHLPQALAARGLTVLTHAELPPGDGCISL 846 Query: 733 GQGVIAAARWLAGE 746 GQ A R LAG Sbjct: 847 GQAAWA-RRELAGR 859 >UniRef50_D1BLR7 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Veillonella RepID=D1BLR7_VEIPT Length = 759 Score = 883 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 257/762 (33%), Positives = 371/762 (48%), Gaps = 35/762 (4%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FL 58 + T+ +R G VQGVGFRP V A L L G V ND GV V ++ FL Sbjct: 5 SNQTTERWGIRYTGIVQGVGFRPLVSMCAHSLGLTGFVYNDSRGVYVEIQGPLGALQLFL 64 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMN 117 + P L RI S + +F + S G +++T I D A C C+ E+ Sbjct: 65 DAVQAEQPRLCRITSQTVQHLTVKGDEIDFIVAPSPLGESVSTFISADTAPCDDCIKELQ 124 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 +RR YPFINCT+CGPR+TII+++PYDR T M FP+C C EY D RR+ A+ Sbjct: 125 -QDKRRRDYPFINCTNCGPRYTIIKSLPYDRERTTMNEFPMCEDCKAEYEDIEGRRYRAE 183 Query: 178 PVACPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 P AC CGP A + G I+AIKG+GG+HL CDARN AV Sbjct: 184 PNACSRCGPQYTLYKPDRKAVDTVNIWNTTRELINEGSIIAIKGVGGYHLVCDARNDAAV 243 Query: 237 ATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPE--LCD 288 LR RK+RP KPLA+M+ D + D +LT PIVL++K + L Sbjct: 244 QRLRKRKNRPHKPLAIMVGTLDMAIELVHINDVELDILTGMERPIVLLEKNHNSSVHLSS 303 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 +APD +GVMLP +P+ +LL +MTSGN SG +++QA +L +AD F Sbjct: 304 YVAPDNRMLGVMLPYSPMHEVLL-PFDAAWIMTSGNKSGDSVLYNDDQAFNELGEVADYF 362 Query: 349 LIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 L+HNR+I +DDSVV +RRSRGYVP+ + + +L +G+DLKN F Sbjct: 363 LVHNREIYAPLDDSVVVVINNKPRFIRRSRGYVPEPIHCDGLEQT--SILAMGSDLKNAF 420 Query: 406 CLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE 465 + +G + ++ H+GDL + ++ ++++ P ++ D+HP + SS+ + Sbjct: 421 AMNKGSEVLVGPHIGDLENISTHETLEWTIKRYKSLFSVQPDKIIIDSHPQFFSSRLGEK 480 Query: 466 MN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 + L V HHHAH A+ +AEH V+ + +DG G G +G +WGGE L Sbjct: 481 IGESFHLSVVPVQHHHAHIASVMAEHNLRGL---VLGIAMDGTGYGPDGTIWGGEFLLCK 537 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQN--YSETASVQQQNWSVLA 579 + + L + A LPGG+ A +PWR L + + Y E + W +L Sbjct: 538 GNQYQRLAHIHAAPLPGGEKAVSEPWRQALWYIRNYYGDDIPFVYQEWMKELPKGWEILD 597 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 +A++ + A+SCGR FD V A LG SY+ + A ALE L +T Sbjct: 598 KALQSRMPMIQATSCGRLFDTVGALLGLGMVH-SYDAQIAIALETLC--GDEKGSLLTYH 654 Query: 640 RVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 + LD Q ++ A +FH +A + I+ SG Sbjct: 655 YDGHILDFTPTVQSIMDGVVRGECRAHLAASFHKTIAIALCETAADLMERYNISDAAMSG 714 Query: 697 GVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 GV NR L + L +++P+ DGGL+LGQ + Sbjct: 715 GVFQNRKLLEFIYRTWHIGNLYMNEAVPSNDGGLALGQLWLG 756 >UniRef50_UPI000187434E [NiFe] hydrogenase maturation protein HypF n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000187434E Length = 802 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 291/791 (36%), Positives = 395/791 (49%), Gaps = 59/791 (7%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 ++ RI G VQGVGFRPFV +A++ L G ND GV + + F QL+ Sbjct: 16 QRIRWRIEGIVQGVGFRPFVATIARRAGLVGFCGNDEQGVFIEVEGTSDALAAFCSQLFT 75 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGER 122 P LARI + EP EFTI S + + PD A CP C E P Sbjct: 76 ELPALARIINHSAEPVAVLGHEHEFTIVPSRHSYSGRALLPPDTALCPDCRREFFDPTNP 135 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPFI+CT+CGPR +II +PYDRP T MAAFP+C C++EY DP DRR+HAQP++C Sbjct: 136 RYLYPFISCTNCGPRLSIITELPYDRPRTTMAAFPMCTPCEREYTDPTDRRYHAQPISCF 195 Query: 183 ECGPHLEWVSHGE------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +CGP L W G+ E A + A A L G ++A+KGIGGFHL CDA N A Sbjct: 196 DCGPRLSWHDAGDTTTATSREEVLALFRRAHALLDDGALLAVKGIGGFHLVCDATNDAAC 255 Query: 237 ATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR RK RP KPLAVM P D L + ++ L +P APIV+ K+ L + I Sbjct: 256 EKLRLRKRRPDKPLAVMAPTVDTAAQLVELTEQEKRFLDSPEAPIVIAPKQRSGPLSNLI 315 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 AP L+ G+MLP + + LL PLV+TSGNLSG+P N AL L IAD F++ Sbjct: 316 APGLDSFGIMLPYSGIHLLLCDR---PLVVTSGNLSGEPVCTDNADALKKLGHIADAFIL 372 Query: 351 HNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPP---------------------GFK 389 H+R+I ++DSV RRSRG+ P +++ Sbjct: 373 HDREIHVPVEDSVF-IGTAPSRRSRGFAPIPVSITATDSRSHTSTGPGSATGPGISVRCT 431 Query: 390 NVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYV 449 + P + G +LKNTF + G+ A +S H+GD+ Q ++ A+ + ++ D TP+ V Sbjct: 432 SQPTIFATGGELKNTFAIAHGDLAHVSAHIGDMGSWASQKAYQRAVDQLLSMRDATPELV 491 Query: 450 VHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDG-GDVIALTLDGI 504 V D HPGY ++ ++A E ++ V HH AHA + LAEH+ + TLDG Sbjct: 492 VCDLHPGYATTAFAERFAAEHDIELLAVQHHFAHALSLLAEHRLLSPNADRAVVATLDGT 551 Query: 505 GMGENGALWGGECLRVNY--RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G G +G++WGGE L ++ E P L GGD A PWR L + + Sbjct: 552 GYGTDGSIWGGEILTLSRSSANWERTWHCPTFPLVGGDRAVTHPWRLALGLTHAWELDDD 611 Query: 563 NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAAL---GCAPATLSYEGEAA 619 + ++ +++ + G+ SS GR FDA AA L +SYE +AA Sbjct: 612 HL-LRNLSNEREVALVKSQLATGVGTVQTSSLGRIFDAAAALLLPRWRGGGAISYEAQAA 670 Query: 620 CALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQA--PVNQRAWAFHDALAQGFA 677 LEA A +H + V ++ + A V Q A+ FH +A Sbjct: 671 MELEAAATRY-VRSHAEALGAVSSETKSEHLQEVIREAVASPDVEQAAFVFHSGVAGLVG 729 Query: 678 ALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQG 735 + + A G + SGG +N LL L H +A FTLL Q +P GDGGLSLGQ Sbjct: 730 KRLVQAAEKSGTDVVGVSGGCANNALLMELLRHEVATEGFTLLQHQIVPPGDGGLSLGQA 789 Query: 736 VIAAARWLAGE 746 V R LA Sbjct: 790 VAG--RLLAAT 798 >UniRef50_C9KK63 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK63_9FIRM Length = 782 Score = 881 bits (2278), Expect = 0.0, Method: Composition-based stats. Identities = 265/782 (33%), Positives = 385/782 (49%), Gaps = 56/782 (7%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 + ++I G VQGVGFRPFV +LA + G VCN G VEV + + F+ + Sbjct: 1 MKRLNIKIYGIVQGVGFRPFVSRLADACQIRGTVCNKGPYVEVFAEGNDAALQQFVEGIP 60 Query: 63 QHCPPLARIDSVEREPFI-WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 + P A I V+ + +F I +S + + PD ATC C AE+ P + Sbjct: 61 KKAPERAAILKVDVHEVTDAAPPYADFAIIESAKERGDIFVSPDIATCDKCRAELFDPKD 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY +PFINCT CGPR TI+ +MPYDR T M FP+C AC KEY P RR+ AQPV C Sbjct: 121 RRYLHPFINCTACGPRLTILESMPYDRERTSMKEFPMCAACHKEYVSPESRRYDAQPVCC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP + + H E A++A L G I AIKGIGGFHLACDA + AV LR Sbjct: 181 NACGPQVYLLGH-EDVRGADAIRAVRRVLASGGIAAIKGIGGFHLACDATDEAAVHRLRT 239 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 KHRP KP AVM+ + L +++T PI+L+ ++ L +AP Sbjct: 240 LKHRPQKPFAVMMRDEETARRACHLEPGEAEMMTGHQKPILLLRRREDSPLAPSVAPGNP 299 Query: 296 EVGVMLPANPLQHLLLQ--------ELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +VGVMLP P+Q L+ E+ LVMTSGN SG P ++E+A L + D Sbjct: 300 KVGVMLPYAPVQMLIFDYPEDHETPEVPAMLVMTSGNPSGAPICHNDEEAEETLAPLCDV 359 Query: 348 FLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L H+R I R DDSV+ M+RRSRG+ P L + VL +G +LKNT Sbjct: 360 ILSHDRRIRLRADDSVMDWFAGRPYMVRRSRGFAPLPFMLSAPLQGQ--VLGIGGELKNT 417 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS---- 460 FCL S ++GD+SD + +++++LM+++ + P+ + D HP Y +S Sbjct: 418 FCLASSHLFYPSPYIGDMSDLRTVLALKDSVQLMESLLENRPEAIACDLHPRYNTSAVAE 477 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 A+E +P V HH+AH +C+AE+ VI ++ DG G G + +WGGE L Sbjct: 478 ALAKEAGVPLFKVQHHYAHILSCMAEND---QQAPVIGVSFDGTGYGTDSTIWGGEFLLA 534 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE--------------WQNYSE 566 +Y+ LG + + GGD ++++ WR ++ + + Sbjct: 535 DYKGFRRLGSIEPFSQAGGDKSSREGWRIAVSLLRDTLVRTMAGRSAAEVDAVWKEQCLA 594 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 ++ ++ + + + +N ++S GR FD V+A LG + ++EGEA+ AL+ A Sbjct: 595 LGLCDEKEFAAQSFMLRQHVNCIESTSAGRLFDGVSALLGLRRES-TFEGEASMALQFAA 653 Query: 627 ASCHGVTHPVTMPRVDNQ-----LDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAA 678 S G + +P + L + + A+ FH ALA+ A Sbjct: 654 ESAEGTDGSLDLPLHEAADGRFLLPTTALFGALYARHQQGRAAEELAYRFHQALAEMIVA 713 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 G++T+ SGGV N LL + L A F L LP DGG+ +GQ Sbjct: 714 GCERARRETGLSTVALSGGVFQNLLLTRLVKDSLEAAGFQPLLHSLLPPNDGGICVGQAA 773 Query: 737 IA 738 A Sbjct: 774 FA 775 >UniRef50_C7NVI5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NVI5_HALUD Length = 766 Score = 881 bits (2277), Expect = 0.0, Method: Composition-based stats. Identities = 292/771 (37%), Positives = 405/771 (52%), Gaps = 38/771 (4%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLRED---PET 56 M+ T V + + G VQGVGFRPFV++ A +L G V N GDG VE+ L + E+ Sbjct: 1 MSDRT--RVTVSVTGVVQGVGFRPFVYRTATGNDLAGRVKNTGDGRVEIVLEGEARGIES 58 Query: 57 FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAE 115 FL L PPLARI++V E + L T F I ST + + I PD A C ACLA+ Sbjct: 59 FLSTLRTDPPPLARIENVTVEDGEPTALDT-FEIVASTDSSGGSGTIPPDTAMCDACLAD 117 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + R + Y C CGPR+T+IR +PYDRP T MAAFP+C C +Y +P DRR+H Sbjct: 118 LRDSSSRFHGYWATACVDCGPRYTVIRELPYDRPTTSMAAFPMCDDCRADYGEPSDRRYH 177 Query: 176 AQPVACPECGPHLEWVSHGEHAE--QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 AQ +ACPECGP L + +A + A+ A +L G++VAIKGIGG HLACDA + Sbjct: 178 AQTIACPECGPTLSLLDGDGNARAGGDDAIAKAGDRLADGELVAIKGIGGTHLACDATDP 237 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLV--DKKYVPE 285 V TLR R RP KP A+M P + + D R L PI+L+ ++ P+ Sbjct: 238 AVVETLRERTGRPEKPFALMAPDLEAVESVAQISDTERDALEDTRRPILLLDGRRENRPD 297 Query: 286 LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 D ++P L VGVMLP + L H L + ++ PLVMTS N+ G P A LADL G+ Sbjct: 298 WFDTVSPGLKTVGVMLPYSGLHHRLFEHIEGPLVMTSANMPGVPMATDRASILADLDGVI 357 Query: 346 DGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D L+H+R+IV R DDSV R SG +RRSRG+VP++L LP + VL LGA+ Sbjct: 358 DAALVHDREIVMRCDDSVARFSGGQRRFVRRSRGWVPESLPLPSPAETAEDVLALGAEFD 417 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 T L + V SQ++GD+ + RE + ++++ P V DAHP +++++ Sbjct: 418 ATVALTQDGAVVPSQYVGDVDNPETVEYLRETVEHLRDLLGTDPDVVACDAHPDFLTTRE 477 Query: 463 AREMN-----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 ARE V HHHAHAA+ LAE + + + DG G G +G++WGGE Sbjct: 478 AREYAEREGMAGPVQVQHHHAHAASLLAER----ERERAVVIAADGTGYGPDGSIWGGEV 533 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQN-WS 576 L + E +GGL +LPGG A +QP R L + + +V Q + Sbjct: 534 LDATLADFERVGGLSTFSLPGGTAAIEQPARLLASLLDGGDRIDELLLARGAVDSQRAAA 593 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 + + + +GIN P +S GR DAV+A LG P SYEGE A LEA A + + + Sbjct: 594 TVRQQVSQGINTPETTSAGRLLDAVSALLGVCPER-SYEGEPAMKLEAAAVDGAVLDYDI 652 Query: 637 TMPRVDN--QLDLATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 D +D + L ++ A ALA G A + A RG+ + Sbjct: 653 PFGTRDGARVVDARQLVRDLDALADDHAISDVAATAQWALAGGLADVAVAVAEDRGVDAV 712 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 F+GGV +N + + + A L +P GDGG++ GQ +AA R Sbjct: 713 GFTGGVAYNDAITRTIRDRVVAAGLDFLGHDRVPPGDGGIAYGQVAVAATR 763 >UniRef50_A6E4D3 Hydrogenase maturation factor F n=2 Tax=Rhodobacteraceae RepID=A6E4D3_9RHOB Length = 737 Score = 881 bits (2277), Expect = 0.0, Method: Composition-based stats. Identities = 330/738 (44%), Positives = 420/738 (56%), Gaps = 24/738 (3%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHC 65 G ++R+RG+VQGVGFRP++WQLA+Q+ L G V ND +GV + F+ + + Sbjct: 3 EGWRIRVRGQVQGVGFRPYIWQLARQMGLRGRVFNDPEGVLIEAAGAQLAAFVAAIPERA 62 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 P LAR+D+V LP F I S G T++ PDAA+CP C+AE+ PG RR Sbjct: 63 PVLARVDAV-LHEVAVFDLPEGFEIAPSRGVGAETRVTPDAASCPDCVAEVFAPG-RRQG 120 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 Y F NCTHCGPRFTI++ +PYDR T MAAFP+C AC EY DP DRRFHAQPVACPECG Sbjct: 121 YAFTNCTHCGPRFTILQGLPYDRARTTMAAFPMCAACRAEYEDPADRRFHAQPVACPECG 180 Query: 186 PHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 P + G A+ A+A L+ G +A+KG+GGFHLACDA + AVA LRARK R Sbjct: 181 PRVWLEPGGG-----DAVAGAVAVLRAGGSIAVKGLGGFHLACDAGSGEAVARLRARKRR 235 Query: 246 PAKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 P KP A+M + + + LL PAAPIVL+ K+ L D +AP +G M Sbjct: 236 PGKPFALMGTLAMIRAVCAVSEEEAALLRDPAAPIVLLRKRAE-VLPDVVAPGQAVLGWM 294 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL HLL+ E PLVMTSGNLSG+P I NE+A L G D FL+H+R I +R+D Sbjct: 295 LPYTPLHHLLIAEFGGPLVMTSGNLSGEPQVIGNEEAREKLGGFVDAFLMHDRVIARRLD 354 Query: 361 DSVVRESG-EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 DSV R +LRR+RG VP L LP GF+ P VL G +K CLV+ QA+L HL Sbjct: 355 DSVERAHPPMVLRRARGRVPGTLPLPVGFEGAPQVLAYGGQMKAALCLVKSGQALLGHHL 414 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAH 479 G+L + + A ++D P+ V D HPGY ++Q A +P V HHHAH Sbjct: 415 GELDEALTWEAFLAAEADYAALFDHRPEVVACDPHPGYRATQAAHARGVPVIEVQHHHAH 474 Query: 480 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGG 539 AAC+AE+ WPL G V + LDG+G+G +G +WGGE L +Y E G L VA+PGG Sbjct: 475 MAACMAENGWPLAAGRVAGIVLDGVGLGPDGTIWGGEVLLGDYLGFERRGWLTPVAMPGG 534 Query: 540 DLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFD 599 D A+++PWR LAQ + + +VL +AI G+NAPL SS GR FD Sbjct: 535 DRASREPWRVALAQLDAAGL---GHLADELFGTRPLAVLRQAIRAGVNAPLTSSAGRLFD 591 Query: 600 AVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW-- 657 A AAALG +YEGEAA LEA A +P + V+ ++ A WQ W Sbjct: 592 AFAAALGF-EGAQTYEGEAAMGLEARAVLGDVGAYP--LGGVEGVIETAPLWQAWAQDRA 648 Query: 658 -QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT 716 A F LA+GFAA R + SGG N LL L D Sbjct: 649 AGVAPEVMAGRFQAGLARGFAARARALIASGEAQAVALSGGCFQNALLLDLTLAALGDVP 708 Query: 717 LLFPQSLPAGDGGLSLGQ 734 +L + PA DGGL+LGQ Sbjct: 709 VLIHRGTPANDGGLALGQ 726 >UniRef50_C6N6M1 Hydrogenase maturation protein HypF n=2 Tax=Legionella RepID=C6N6M1_9GAMM Length = 744 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 277/763 (36%), Positives = 396/763 (51%), Gaps = 50/763 (6%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE-TFLVQLY 62 +QL I+G+VQGVGFRP V+++A QL L G V N+ GV + ++ F+ L Sbjct: 1 MKLERLQLIIQGQVQGVGFRPCVYRVANQLRLTGWVQNNASGVLIEVQGTLACEFIPHLK 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 ++ PPLA+I +++ + F I +S G NT I PD C CL E+ P R Sbjct: 61 ENLPPLAKISTIQLKTIPLKINEVFFEIIESAKGKANTIISPDTCICSECLQELFDPQSR 120 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 YRYPF+NCTHCGPRF+I + +PYDR T M FPLC C+ +Y +P +RR+HAQP AC Sbjct: 121 YYRYPFLNCTHCGPRFSITQTLPYDRCQTSMGLFPLCQDCNADYTNPDNRRYHAQPTACA 180 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP L ++ ++ G+I+A+KG+GG+ L CDARN + LR R Sbjct: 181 NCGPQLSL-----------PVENIAQRILQGEIIALKGLGGYQLICDARNEITLLKLRER 229 Query: 243 KHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELC-DDIAPDLN 295 K+R KPLA+M+ + + A+ LL PA PIVL+ KK D IAP L+ Sbjct: 230 KNRATKPLALMVANSKSAEQIVAISEQAQILLERPARPIVLLQKKNGVSRSIDKIAPGLS 289 Query: 296 EVGVMLPANPLQHLLLQELQC--------------PLVMTSGNLSGKPPAISNEQALADL 341 +GVMLP PL +LL LV+TS N +G+P I + +A ++ Sbjct: 290 HLGVMLPYTPLHYLLFNAFAENVDGCGWLDELQSMILVVTSANSAGEPIVIEDHRAKIEI 349 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLG 398 + AD + +NR I+ R DDSV R ++RRSRG+VP + LP +PP L +G Sbjct: 350 KTQADKIVSYNRRIITREDDSVARLINNKPMLIRRSRGFVPTPIQLP---YTIPPTLAVG 406 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 LKNTF + RG +A +SQH+G L++ + E+L + N D P+ + HD HP + Sbjct: 407 GHLKNTFSITRGNEAFVSQHIGSLNNKATIDFFHESLTHLLNFLDVKPERIAHDMHPDFY 466 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 ++++A+ +P + HH A A V+ L LDG G G NG WGGE + Sbjct: 467 TTRFAQHYGVPAFAIQHH---HAHLAAVAAEHGIQQRVLGLALDGYGYGLNGEAWGGELM 523 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 + CE LG + PGG++AA++PWR + R + + Q + Sbjct: 524 LLEQASCERLGSFYPLPQPGGEIAAREPWRMAASVLHRLGRGKEISKRFSGCTQ--AKAI 581 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 + +++ IN+PL SSCGR FDA +A LG + YEG+AA LE+L H P Sbjct: 582 HQLLDKKINSPLTSSCGRLFDAASALLGVQLMSQ-YEGQAAMRLESLVTQLHIA--PNGW 638 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 DN D+ + L+ P+ A FH L G + ++ +R I +V SGG Sbjct: 639 RIKDNNFDMLPTLELLLDIACPIA-GANLFHGTLIAGLSTWIKGMCRVRRIDMVVLSGGC 697 Query: 699 IHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 N++L L L P+ LP DGG+SLGQ IA Sbjct: 698 FLNQILAEGLTKALCESGIKSFLPRDLPPNDGGISLGQAWIAG 740 >UniRef50_B8KXU6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KXU6_9GAMM Length = 771 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 278/768 (36%), Positives = 390/768 (50%), Gaps = 38/768 (4%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQ 63 ++ I G VQGVGFRPFV++ A+ + G V N GDGV V P E F L Sbjct: 13 VRLRFEIGGAVQGVGFRPFVFRTARHFGVTGHVANTGDGVIVEAEGAPCALEAFAQALQG 72 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGER 122 P A++ S + + ++F I ST G + ++PD ATC CL ++ P R Sbjct: 73 SAPAPAQLRSFRCQSIAL-RGDSDFVIGDSTVGVQRDAVLLPDLATCRLCLEDIFDPENR 131 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YPF NCT CGPR++I+ +PYDR T M+ F +C C +EY DP DRRFHA+P+AC Sbjct: 132 RYLYPFTNCTACGPRYSILCELPYDRANTTMSGFSMCAECAREYADPQDRRFHAEPIACD 191 Query: 183 ECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + + AL A A ++ G I A+KG+GGFHL DARN+ AV TLR Sbjct: 192 TCGPQIALWDRHGDRIKVRGEALDGAAAIIRSGGIAAVKGLGGFHLLTDARNAEAVRTLR 251 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 +RK RP KP A+M+P + + + LL + APIVL+ ++ V + +D+AP L Sbjct: 252 SRKRRPNKPFALMVPSLEVAEHLCFVNADEKSLLASSEAPIVLLRQRAVTGVTEDVAPGL 311 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 E+G+MLP PL HLLL L P+V+TS NLSG+P + ++ALA L +AD FLIH+R Sbjct: 312 CELGLMLPYTPLHHLLLHRLGFPIVVTSANLSGEPIVANEDEALARLGHLADVFLIHDRP 371 Query: 355 IVQRMDDSVVRE---SGEMLRRSRGYVPDALALPP-GFKNVPPVLCLGADLKNTFCLVRG 410 I Q +DSV+R + + +R RG P AL + G N VL LG K L+ Sbjct: 372 IAQASEDSVMRVILEAPQAIRCGRGRAPLALPVDSLGLGNHLSVLALGGHFKTAATLLIN 431 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPT 470 ++A + QH+GDLS + EA ++ + + D HP Y +++ A M P Sbjct: 432 DKATVGQHIGDLSTLAAEHTLAEAAGTLEALRGSKAAVIACDQHPDYATTRLAERMGRPV 491 Query: 471 QTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGG 530 V HH AH + +AEH G V+ + DG G+G +G +WGGE L+V Sbjct: 492 VPVQHHVAHVVSVMAEHGL---SGPVLGIAWDGTGLGPDGTIWGGEFLQVRNDSWMRKAH 548 Query: 531 LPAVALPGGDLAAKQPWRNLLAQCLRFVP-----EWQNYSETASVQQQNWSVLARAIERG 585 L LPG + A ++P R+ + E + + A+ + +L + +ERG Sbjct: 549 LRPFRLPGAETAIREPRRSAVGMLYEAFGACGVVENTHLACIAAFSEPEREILCQMLERG 608 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN-- 643 I +P SS GR FDA AA LG P + S+EGEA LEALA + +P + Sbjct: 609 IQSPWTSSAGRLFDAFAAILGLTPVS-SHEGEAPMRLEALADASSCAPYPFDINAPQGCP 667 Query: 644 -QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 +D L A H A A++ + T+ +GG Sbjct: 668 LVIDWFPMVHAVLQDLAADVRNRTIAGRIHGTFAAMMLAIV----ESTDVGTIALTGGCF 723 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 NRLL A + A ++ ++LP DGGLSLGQ V A Sbjct: 724 QNRLLTELAARQIEQAGRQVVLARALPPHDGGLSLGQAVWARRAAQKE 771 >UniRef50_B5EP19 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Acidithiobacillus RepID=B5EP19_ACIF5 Length = 803 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 340/774 (43%), Positives = 437/774 (56%), Gaps = 42/774 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 + + G ++R+RG VQGVGFRP VW++A+ L GDVCNDG+GV +R+ + + FL Sbjct: 6 DRVATLGEEVRVRGLVQGVGFRPAVWRIARDCGLSGDVCNDGEGVLIRIWGPATERDRFL 65 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 +L PPLARID V R F I S G ++T VPDAATCPACL E+ Sbjct: 66 TRLRDEHPPLARIDEVVRGSLREDPPEGPFGISTSRSGHVHTGAVPDAATCPACLGEIFD 125 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P RRYRYPF NCTHCGPRF+I+ +PYDR T M FPLC C EY +P DRRFHAQP Sbjct: 126 PFHRRYRYPFTNCTHCGPRFSILEDIPYDRAHTSMGVFPLCRDCRAEYENPEDRRFHAQP 185 Query: 179 VACPECGPHLEWVSHGEHAEQE------AALQAAIAQLKMGKIVAIKGIGGFHLACDARN 232 VAC CGP V HA A+ AA LK G+IV IKG+GGFHLACDA N Sbjct: 186 VACHACGPKARLVRLDGHAVSADRYTQLDAVDAATNLLKCGEIVLIKGLGGFHLACDATN 245 Query: 233 SNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPEL 286 AV+ LR RKHRP KPLA+M + + A +LL + APIVL+++ L Sbjct: 246 DRAVSGLRLRKHRPHKPLALMARDLEVVRRYAHVSRAEEKLLQSHQAPIVLLNRLDNDSL 305 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 IAP + +G MLP PL HLL++ + P+V+TSGNLS P + A+ L+G+ D Sbjct: 306 APGIAPGMRRLGFMLPYTPLHHLLMRRMDRPIVLTSGNLSDAPQVTDDAAAVRALRGVTD 365 Query: 347 GFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 L H+R I+ R+DDSVV+ +G+ +LRR RGY P++L LP GF P +L LG +LKN Sbjct: 366 WMLTHDRAIINRVDDSVVQMAGDDTMILRRGRGYAPESLPLPAGFGASPDLLALGGELKN 425 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW- 462 TFCL++ QA+LSQH+GDL + L L ++ P+ VV D HP Y+S +W Sbjct: 426 TFCLIKDGQAILSQHMGDLEQAAVWDDTVRNLALYARLFQHVPKAVVVDRHPEYLSRKWG 485 Query: 463 ---AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 A E +LP +V HHHAH AA +AEH PL+ VIAL LDG+G+G+ GA WG ECL+ Sbjct: 486 VEMAEEGDLPLISVQHHHAHIAAVMAEHGLPLEHPPVIALALDGMGLGDGGAWWGCECLQ 545 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQ 573 V+YRE HLGGL ALPGG LA ++PWRN Q + + + + ++ Sbjct: 546 VSYREVRHLGGLRPSALPGGGLAMREPWRNAFVQLADAFGWSVARQRFADLAIVEYLVEK 605 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS----- 628 + L +R I PL SS GR FDAV+A G +S+EG+AA LEA Sbjct: 606 PVAQLLHMRDRNICTPLCSSAGRLFDAVSAVCGLCMDRVSHEGQAAMLLEACVDPSIMGD 665 Query: 629 CHGVTHPVTMPRVDN---QLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMRE 682 +P + + Q+D T WQ L PV A FH A G A L+RE Sbjct: 666 ASEPGYPFGIAESEKGFIQMDPRTLWQPLLGDLQGGVPVATVAARFHKGFAAGLAQLLRE 725 Query: 683 QATMRGIT-TLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLG 733 T T+ SGGV N L L +L P +PA DGGL+ G Sbjct: 726 ALGATPWTSTVALSGGVFQNLTLLRATREALESQGLEVLIPHLIPANDGGLAFG 779 >UniRef50_Q7WXP6 HypF3 n=3 Tax=Bacteria RepID=Q7WXP6_RALEH Length = 796 Score = 878 bits (2271), Expect = 0.0, Method: Composition-based stats. Identities = 343/778 (44%), Positives = 430/778 (55%), Gaps = 46/778 (5%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLAR 70 RG VQGVGFRP VW+LA L G V ND DGV++R D + F+ +L CPPLAR Sbjct: 2 RGMVQGVGFRPTVWRLAHDCGLSGSVRNDSDGVQIRAWGDAVALDRFIARLRDECPPLAR 61 Query: 71 IDSVEREPFI---WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 ID++ER F I S GG + T +VPDA C AC+A++ P RRYRYP Sbjct: 62 IDAIERRVLAQDAEGADLGGFRIVASVGGPVRTGVVPDAVVCSACIADIGDPLNRRYRYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F NCTHCGPR +I+RA+PYDR T MAAFP+CPAC EY DP DRRFHAQP+AC CGPH Sbjct: 122 FANCTHCGPRLSIVRAIPYDRANTAMAAFPMCPACLAEYEDPADRRFHAQPLACAACGPH 181 Query: 188 LEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + G A + A++AA A L+ G IVAIKGIGGF LACDA N AVA LR RK R Sbjct: 182 VWLEHTGGPLAAGPDDAIRAAWALLRDGGIVAIKGIGGFQLACDACNPVAVARLRQRKRR 241 Query: 246 PAKPLAVMLPVADGLPDAARQ------LLTTPAAPIVLVDKKYV---PELCDDIAPDLNE 296 KP A+M + + LL +PAAPIV+V + L D+AP + Sbjct: 242 ERKPFALMARDLAVIRQYSEPTAAECGLLQSPAAPIVIVQTRSDRQGAPLAPDVAPGIAA 301 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G MLP PL LL+ P+V+TSGN S +P N A L IAD FL+H+RD+V Sbjct: 302 LGFMLPGTPLHWLLMAMADRPIVLTSGNASDEPQCTENADARMRLGAIADAFLMHDRDVV 361 Query: 357 QRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 +R+DDSV R ++RRSRGY P L LPPGF PVL +G +LKNTFCL+R +A Sbjct: 362 RRVDDSVARVVLDVPRVMRRSRGYAPAPLPLPPGFAAAAPVLAMGGELKNTFCLMRAGEA 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLP 469 +LS H+GDL D +R AL +++ P V D HP Y+S + AR+ LP Sbjct: 422 ILSHHMGDLEDALTHADYRRALTQYMALFEHGPHLVAVDMHPEYLSGKIGRDLARQGQLP 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAH AAC+AE++ L G V+ + LDGIG G +G+LWGGE L +YR+ L Sbjct: 482 VAQVQHHHAHIAACMAENRVALAAGPVLGVALDGIGYGVDGSLWGGEFLLADYRDFTRLA 541 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAIE 583 V +PGG+ A QPWRN A V + + + + VL + Sbjct: 542 CFKPVGMPGGERAIHQPWRNTYAHLAAAVGWDTLIARHASLALVRFLATRPREVLDAMLT 601 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS------CHGVTHPVT 637 R IN+PLASS GR FDAVAAA G P YEG+AA EALA G +P Sbjct: 602 RSINSPLASSAGRLFDAVAAAAGVCPERACYEGQAAMEFEALADRRTLSEEDDGRAYPFA 661 Query: 638 M-PRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGIT--- 690 + P L+ W L P + FH LA A+++ A G Sbjct: 662 IVPGTPACLEPGPMWVALLADLARATPAPLISARFHKGLAIAIASMVAYLADCPGAGCRA 721 Query: 691 -TLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 + SGGV NR+L ++A L +L +PA DGGLS GQ IAAAR L G Sbjct: 722 VPVALSGGVFQNRILLEQVATRLSAQGRRVLTHSQVPANDGGLSFGQAAIAAARSLGG 779 >UniRef50_C2BTW9 Hydrogenase maturation protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BTW9_9ACTO Length = 774 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 287/767 (37%), Positives = 385/767 (50%), Gaps = 45/767 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 +RG VQGVGFRP V ++A Q + G V ND + V + + E F+ + Sbjct: 12 RRAYELRGVVQGVGFRPHVAKVAAQYPITGFVGNDDESVFIEAQGAREAVDGFMETMLAT 71 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERR 123 PPLA + + TEF I S T I PD ATCP C AEM P RR Sbjct: 72 LPPLASVLHSSSTDLPEQKGETEFRIVPSRRRPGARTLIPPDTATCPDCQAEMADPTNRR 131 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRYPF CT+CGPR TI+ +PYDR T M FP+CPAC +EY +P +RR+HAQPV+C + Sbjct: 132 YRYPFTTCTNCGPRATIMVDLPYDRDTTTMVKFPMCPACHQEYTNPTNRRYHAQPVSCYD 191 Query: 184 CGPHLEWVSH----------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 CGP L AAL A +L+ G+I+A+KGIGGFHL CDARN Sbjct: 192 CGPVLWVSPADAPDLWPPEGDRRPLIAAALDEARQRLRAGQILAVKGIGGFHLMCDARNE 251 Query: 234 NAVATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELC 287 AVA LR RK R KP AVM+ A AR + L T A PIV+ +L Sbjct: 252 AAVARLRKRKDRGDKPFAVMVADAVTAARLARLDADQLRTLQTAARPIVIAPFGQEYDLA 311 Query: 288 DDIAPDLNEVGVMLPANPLQHLLL--QELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 +AP L +VG++LP PL LL + Q LV TSGNL+G+P +N+ A L GI Sbjct: 312 PAVAPGLGDVGILLPYAPLHLELLSGECAQMALVATSGNLAGEPLCFTNQDAAERLAGIV 371 Query: 346 DGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D F+ H+RDI M+DSV + + RRSRGY P +AL P+L +G +LK Sbjct: 372 DAFVFHDRDIHLPMEDSVFLANAQVTIPSRRSRGYAPLPVALSQPATV--PILAVGGELK 429 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFCL G A +S H+GD+ Q + A+ + N P+ VV D HP Y + W Sbjct: 430 NTFCLAHGSWAHISGHIGDMGTLASQEAFDRAVTQLLNFQRQRPEKVVCDLHPNYSTVSW 489 Query: 463 AREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 A ++ V HH AHA + LAEH + +++DG G G +G +WGGE L Sbjct: 490 AERFAASHDIELTQVQHHVAHAYSLLAEHSCL---DPAVVVSVDGTGYGTDGTIWGGEVL 546 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ----- 573 + + + +P +L GGD A + PWR L + +W +A + Q Sbjct: 547 DIRGAQWQRSAHVPTFSLVGGDRAVRYPWRVALGIAHDWGMDWITEKISAEIGSQPGKST 606 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT 633 ++ + G +SCGR FDA AA LG ++YE +AA LE +A S Sbjct: 607 ELELVKSQLASGFGVSATTSCGRLFDAAAAILGIRTE-VTYEAQAAMELEHVATSWANAH 665 Query: 634 HPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 ++P+V + ++ PV +RAWAFH LAQ + A T+ Sbjct: 666 PEASLPQVGS---YQELVEKLGEVDRPVGERAWAFHVGLAQLLGEQACQVAEQADTKTVG 722 Query: 694 FSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 +GGV NR+ +L +L Q++P DGGLSLGQ A Sbjct: 723 LTGGVALNRMFTRHFVSFLGEGGCRVLTHQNVPPNDGGLSLGQVWAA 769 >UniRef50_Q13HK4 Hydrogenase maturation protein HypF n=8 Tax=Bacteria RepID=Q13HK4_BURXL Length = 812 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 310/771 (40%), Positives = 420/771 (54%), Gaps = 48/771 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPP 67 +R+RG VQGVGFRP VW+LA + G VCNDG+GV +R D E F+ L+ CPP Sbjct: 23 IRVRGLVQGVGFRPAVWRLAHDCGVSGTVCNDGEGVLIRAWADRPVLERFVAGLHGRCPP 82 Query: 68 LARIDSVEREPFIWS-QLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 L RIDSVER P EFTI +S GG +T +VPDA TC ACL E P RRYRY Sbjct: 83 LGRIDSVERRAVPDVAPAPGEFTIVESGGGPAHTGVVPDAVTCRACLDETLDPSGRRYRY 142 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF NCTHCGPR +I+ A+PYDR T MAAFPLC AC +EY DP DRRFHAQ VACP CGP Sbjct: 143 PFTNCTHCGPRLSIVGAIPYDRCATTMAAFPLCGACRREYDDPGDRRFHAQAVACPACGP 202 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + E+ L+ A L++G IVAIKG+GGF LAC A AV LR KHR Sbjct: 203 RIWIEQADGSRERGDPLEVACRYLRLGGIVAIKGLGGFQLACMATAQAAVTKLRVLKHRA 262 Query: 247 AKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDD--IAPDLNEVG 298 KP A++ + +A LL + A PIV++ D +AP +G Sbjct: 263 RKPFALLARDVTMAERYCSVSNADAALLRSAAGPIVIMPAIGRTTAADLSGVAPGTATLG 322 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 MLP+ PL HL+++ L P+V+TSGN++ +P +N+ A L G+AD FL+H+R+I R Sbjct: 323 FMLPSTPLHHLIMRALDAPIVLTSGNVADEPQCTANDDARIRLAGMADVFLMHDREIASR 382 Query: 359 MDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 +DDSV R +LR SRGY P L +P F PPVL +GA KN FCL+R +A++ Sbjct: 383 IDDSVARVLHGVPRLLRSSRGYAPAPLRMPHDFAAAPPVLAMGAQQKNAFCLLREGEALV 442 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQ 471 S H+G+L + ++ +L + ++ + V D HP Y+S + AR+ +LP Sbjct: 443 SHHIGELENGETYRDYKASLARYEKLFGHDARVVAVDLHPEYLSRKLGIDIARQRSLPLA 502 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 + HHHAH AACLAE+ L ++ + LDG GMG + LWGGE L Y +C + L Sbjct: 503 EIQHHHAHFAACLAENDIGLASN-ILGVVLDGHGMGTDRRLWGGEFLLGGYVDCTRVASL 561 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVP------EWQNYSETASVQQQNWSVLARAIERG 585 VALPGG A +PWRN A + + + + ++L + IE G Sbjct: 562 TPVALPGGMRAVLEPWRNTYAHLRASLGWEWVARRYAKLDLVRFLAGRPLALLEQMIEGG 621 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS------CHGVTHPVTMP 639 +N+P++SS GR FDAVAAA G + YEG+AA EAL + +P + Sbjct: 622 VNSPVSSSAGRLFDAVAAAAGVCRERVQYEGQAAIEFEALIDRRTLHDEDDALAYPFRIG 681 Query: 640 RVDNQ-----LDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQ--ATMRG- 688 + +D W L+ P A FH +++ + + G Sbjct: 682 EASDAAYPLLIDAKPMWLALLDDLMRATPAPVIAARFHKGFTIAIVQMVKRALGSRLHGS 741 Query: 689 ---ITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQ 734 + T+ SGGV+ N L +L+ LA +L + +PA DGG++LGQ Sbjct: 742 APAVRTVALSGGVMQNAALFEQLSERLAACGLVVLAHRQVPANDGGIALGQ 792 >UniRef50_D2QHS1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHS1_9SPHI Length = 778 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 296/764 (38%), Positives = 388/764 (50%), Gaps = 46/764 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 L + G+VQGVGFRPFVWQLA+ + L G V N DGV + + D +T ++ Sbjct: 2 TFHLHLTGQVQGVGFRPFVWQLARSMKLKGTVSNGADGVHIYVNADLQTVRVLTRRIRAE 61 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 P LARI SV+ +FTI +S G + + PD A C AC AE++ P RR Sbjct: 62 APALARIQSVKLAEVEP-IDFGDFTIVESQAVGQASLLLTPDLALCDACRAEISDPANRR 120 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + Y F CTHCGPR++I+R +PYDRP T MA F +C C++EY DP +RRF+AQ +CP Sbjct: 121 FGYAFTTCTHCGPRYSILRRLPYDRPTTTMAPFGMCADCEREYHDPSNRRFYAQTNSCPN 180 Query: 184 CGPHLEWVSHGEHAEQEA---ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C L +Q +I L G+ +A+KGIGGF L CDA N++A+ LR Sbjct: 181 CLVELSLFLASGQCITRDQSNIIQQSIDVLASGRTIAVKGIGGFLLLCDATNADAIHQLR 240 Query: 241 ARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPE---LCDDIA 291 RKHRP KPLAV+ P D L D R LLT+PA+PIV +DK+ + D IA Sbjct: 241 ERKHRPTKPLAVLYPNIDQLQQDCFLADDERALLTSPASPIVALDKRPELPSGLVADQIA 300 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P LN++GVMLP PL LL PLV TSGN SG P +NEQAL L +AD + H Sbjct: 301 PGLNQLGVMLPYTPLLALLADAFGKPLVATSGNRSGSPICYTNEQALDQLSAVADLIVTH 360 Query: 352 NRDIVQRMDDSVVRESGEM-----LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 NRDIV DDSVVR S LRRSRG P + + VL LGA LK+TF Sbjct: 361 NRDIVVPQDDSVVRLSPVFRQPIILRRSRGLAPTVMMTDIP-HSNANVLALGASLKSTFA 419 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 +SQ+LGDL Q +R L ++D P V+ D H GY S+Q A E+ Sbjct: 420 WQLRGNTYVSQYLGDLESYDTQTSFRATLDHFLTLFDAKPDAVLADQHEGYFSTQLAHEL 479 Query: 467 ----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 +P ++ HH AH AA LAE++ V+ + DG G G +G +WGGE ++ + Sbjct: 480 ANIWGIPLVSIQHHEAHLAAVLAENKLMEQAEPVLGVIWDGTGYGTDGQIWGGEFIKYQH 539 Query: 523 RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAI 582 E +G GD ++P + L+ + ++ W++ + Sbjct: 540 GGFERVGHFAYFDALLGDKMPREPRLSALSLAFNIPGADELL--RPKFTEKEWNLYTKVG 597 Query: 583 ERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV------THPV 636 + N SS GR FDAVAA LG A +SYEGEAA LE+ AA V H + Sbjct: 598 VQ--NKLKTSSVGRLFDAVAALLGLAD-KVSYEGEAALLLESCAARYVRVNGYTTSQHYL 654 Query: 637 TMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 + Q+ L PV Q A FH L Q AA+ R+ G+ L Sbjct: 655 PETLLKAQVPTQAIVAGVVNDLQAGLPVGQIAATFHYTLVQAVAAVARQM----GVQQLA 710 Query: 694 FSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQGV 736 FSGGV N LL L + L + L F Q L D +S GQ Sbjct: 711 FSGGVFQNALLVDWLRYELEPAYQLHFHQQLSPNDECISFGQIA 754 >UniRef50_A0KL72 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Aeromonas RepID=A0KL72_AERHH Length = 812 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 288/785 (36%), Positives = 388/785 (49%), Gaps = 57/785 (7%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQH 64 + I G VQGVGFRPFV+ LA + + G V ND +GV + PE F +L + Sbjct: 19 RREFHIDGIVQGVGFRPFVYGLALRHGIAGYVLNDANGVTIGAEGSPEQLAAFARELREL 78 Query: 65 CPPLARIDSVEREPFIWSQLPT-------EFTIRQSTG-GTMNTQIVPDAATCPACLAEM 116 PPL+RID + P +F I+ S + I PD C AC ++ Sbjct: 79 APPLSRIDHFSDRELPLAHGPDYDGHFHGQFRIKASQQQSSATVAISPDQGMCEACANDV 138 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +R +RYPF NCTHCGPR+TIIR +PYDRP T MA F +CP C Y +PLDRR+HA Sbjct: 139 ANPNDRHHRYPFTNCTHCGPRYTIIRRLPYDRPHTAMAGFAMCPRCAAAYENPLDRRYHA 198 Query: 177 QPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 QPV+CPECGPHL W S AE+E ALQAA + L+ G ++A+KG+GG+HL CDARN Sbjct: 199 QPVSCPECGPHLSWRSGRGDALAEREDALQAAASALQAGALIAVKGMGGYHLVCDARNKQ 258 Query: 235 AVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVP---- 284 +VA LR K R KPLAVM+ +A QLL + A PI L+ K+ Sbjct: 259 SVARLRTLKRRERKPLAVMMGSLAEAKLHVTGCEAEWQLLASQARPITLLRKRKNDDRPS 318 Query: 285 -------ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQA 337 L + IAP + +GVMLP PL LLL PLV TS N G P I E Sbjct: 319 KSQLTTAPLAEGIAPGIPYLGVMLPYTPLHQLLLDACAIPLVATSANGRGSPILIECEAV 378 Query: 338 LADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPV 394 + +L DG L HNR I+ DDS+V+ +G + LR +RGY P +L P+ Sbjct: 379 IRELGSEIDGILDHNRPILHPCDDSLVQWAGRRRQTLRLARGYAPCTPSLQEAVNL--PL 436 Query: 395 LCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAH 454 L +GA KN L G Q + S ++GDL +Q + + L +++YD P+ +V D H Sbjct: 437 LAVGAQQKNQLALAFGRQRIYSPYIGDLHSLPMQSHFEQTLATFRDLYDLKPELLVSDRH 496 Query: 455 PGYVSSQWAR----EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENG 510 PGY+S QWA+ + V HHHAH +AEH G V+ + DG G+G++G Sbjct: 497 PGYLSHQWAKSYCRDQGAIHLEVQHHHAHLLGVMAEHDIT---GPVLGVAFDGTGLGDDG 553 Query: 511 ALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSE 566 LWGGE L + + + L L GG+ A ++P R LL + + Sbjct: 554 TLWGGELLLADVKGFTRVAHLKPFKLIGGEAAIREPVRQLLGLLFESYVVDETSALDIPA 613 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 + + L + + G NAP SS GR FDAVAA LG T YEGEA LEA A Sbjct: 614 IKQLPAERIRNLHQLWQLGRNAPYTSSIGRLFDAVAALLGVID-TPDYEGEAGLLLEAAA 672 Query: 627 ASCHGVTHPVTMPRV-------DNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAAL 679 P + Q+ A ++ + + A + + L Sbjct: 673 LQLAPDEVPFPLAFDLSQSAEGPLQIQWAELINTLVSERRKGSSTASLA-AGFIRAISNL 731 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 + A + GGV NR+L +L L A +L ++LP DGG++ GQ Sbjct: 732 VIALAERFPGYPVALGGGVFQNRVLMDQLVPALEAAGRQVLTSETLPLNDGGIAAGQLWF 791 Query: 738 AAARW 742 A Sbjct: 792 AIHHL 796 >UniRef50_A6Q3M0 Hydrogenase maturation protein HypF n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3M0_NITSB Length = 703 Score = 874 bits (2260), Expect = 0.0, Method: Composition-based stats. Identities = 247/749 (32%), Positives = 361/749 (48%), Gaps = 62/749 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET-FLVQLYQHCPPL 68 ++ ++G VQGVGFRPFV++LA +L L G + N DGVE+ + + E FL L + PPL Sbjct: 2 RIFVKGIVQGVGFRPFVYKLANELGLAGFIRNCSDGVEIVIEGENEELFLEHLQSNLPPL 61 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 A+I S++ + FTI +S G T + PD + C ACL ++ P RRYRYP Sbjct: 62 AKIFSLKIQSTPKQN-FQSFTIIKSQEGQKETFLSPDISICDACLQDLFDPQSRRYRYPL 120 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 INCT+CGPRFTII+ +PYDR T MA FP+C C +EY DP R FHAQP+ C CGP L Sbjct: 121 INCTNCGPRFTIIKDLPYDRKHTSMAKFPMCQECQREYHDPNSRFFHAQPIGCNSCGPEL 180 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + E A+ A + + G+IVAIKG+GG+HL C + LR K RP K Sbjct: 181 FY----ESLSGYEAIGAVVKDILTGEIVAIKGVGGYHLVCL---PKSAYKLRQIKRRPKK 233 Query: 249 PLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 P A+M + + L+T+ PIV+V K + D+APD++ +GV LP Sbjct: 234 PFALMFKSIGKIKEVCHINEYEENLVTSKERPIVIVKAKK---IFADVAPDIDRLGVFLP 290 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +P+ +LL + PLV+TS N+S +P E+ + L +NR+IV+ DDS Sbjct: 291 YSPIYYLLFSLIDSPLVVTSANISDEPIVKD-EENIKRFTQKV---LYYNREIVRSCDDS 346 Query: 363 V---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 V + R SRGY P + L P +L +GA KNT L +LS H+ Sbjct: 347 VLVGIDNRPLFYRLSRGYGPKSFYLSKQL---PAILAVGARQKNTISLGFANNVILSPHI 403 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAH 479 GD+ + + + + + IYDF+P+ VV D HPGY ++Q+A+ +++ T V HH AH Sbjct: 404 GDIKNIQSYNYFIQVIEDFKKIYDFSPEVVVCDKHPGYETTQYAKSLDITTVEVQHHLAH 463 Query: 480 AAACLAEHQW---PLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVAL 536 A AE + PL + + DG G G++G +WGGE + E + + Sbjct: 464 IYAAKAEMELTHHPLSQNLFLGFSWDGTGYGDDGKVWGGEVFVGD----ERKYHFDYLKI 519 Query: 537 PGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGR 596 GG+ A K + ++ E ++ + A E+ IN SS GR Sbjct: 520 AGGEKAIKDIRLIAWSLLKKYGFEVED------------KLFHLAYEKNINCFETSSVGR 567 Query: 597 FFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLN 656 FDAVA G YEG +E + + +D + Sbjct: 568 LFDAVAFLAGLCTY-QEYEGYTGLLVEKAY-QAREDRYEFYIHDRMITIDFLSLI----- 620 Query: 657 WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT 716 + F + L + + + ++ SGGV N+ L L + Sbjct: 621 -KDKKADIPAKFLNTLTAIIVEIAKREK-----LPVILSGGVFQNKTLLENTIKKLQQNS 674 Query: 717 L--LFPQSLPAGDGGLSLGQGVIAAARWL 743 + FP +P DGG+SLGQ A + Sbjct: 675 IPYFFPTQIPINDGGISLGQLWYALENYK 703 >UniRef50_Q20XQ9 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Rhizobiales RepID=Q20XQ9_RHOPB Length = 785 Score = 873 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 336/759 (44%), Positives = 425/759 (55%), Gaps = 34/759 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCP 66 ++R+RG VQGVGFRPFV LAQ+L L G V ND +GV + + + E + + P Sbjct: 17 RIRVRGLVQGVGFRPFVHALAQRLALLGSVHNDSEGVLIHVAGERAAIEALVAAISDEAP 76 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQST---GGTMNTQIVPDAATCPACLAEMNTPGERR 123 LA + ++ER P+ F I S GG +VPDA C AC AE++TPGERR Sbjct: 77 ALAHVVTIERAPWSAPSGLVTFAIASSPAEHGGRNTAGVVPDARICAACAAEIDTPGERR 136 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YRY F +CT CGPRF+II A+PYDRP T M F LC C EY P DRRFHAQP+ACP+ Sbjct: 137 YRYAFASCTACGPRFSIIDAIPYDRPNTTMRDFALCAPCRSEYDSPADRRFHAQPIACPD 196 Query: 184 CGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 CGP L + + L AA+ L+ GKI+A+KG+GGFHLACDA + AV LRAR Sbjct: 197 CGPQLWLENAAGARVAADDPLTAAVDALRQGKILALKGLGGFHLACDAGSEAAVDALRAR 256 Query: 243 KHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K RPAKP A+M + + LL +PAAPIVL+ ++ L +AP+ + Sbjct: 257 KRRPAKPFALMAADLEAIRRFCRADAQEAALLLSPAAPIVLLPWRHHEGLAAAVAPNQSL 316 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G MLP PL HLLL E LVMTSGN+SG+P I N A L G AD FL+H+R I Sbjct: 317 LGFMLPTTPLHHLLLNEFGGALVMTSGNVSGEPQVIDNADAQRKLGGFADCFLMHDRRIA 376 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 +R+DDSV R G +LR +RGY P LPPGF PPVL LG ++K CL R ++A Sbjct: 377 RRLDDSVARVVGGETRLLRHARGYAPAPRTLPPGFAAAPPVLALGGEMKGAICLTRNDEA 436 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLP 469 +LS HLGDL + ++ A+ ++D P + D HP Y SS WA E LP Sbjct: 437 LLSHHLGDLEEPLTYREFVRAIDDYAQLFDHRPSLLAADLHPAYRSSAWAEQAAAERALP 496 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAH A+ +AE WP DGG V+ + LDGIG G +G +WGGE L +Y + + Sbjct: 497 LARVQHHHAHIASAMAERGWPRDGGRVVGIALDGIGYGSDGTVWGGEILLCDYMDFTRMA 556 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW------QNYSETASVQQQNWSVLARAIE 583 L V LPGG A QPWRNLLAQ A + Q VL +A+ Sbjct: 557 HLKPVPLPGGARAVTQPWRNLLAQLDAAFGTEGTAACLPALPGGAILAAQQLGVLRQAMA 616 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-SCHGVTHPVTMPRV- 641 RGIN+P +SSCGR FDAVAAAL APA LS+EGEAA ALEALA+ S +P + Sbjct: 617 RGINSPPSSSCGRLFDAVAAALALAPAQLSFEGEAAMALEALASGSADTRGYPFALDTAT 676 Query: 642 -DNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 +D A W+ L+ P+ A FH LA F + A + GG Sbjct: 677 TPWSIDPAPMWRALLDDLAAGVPIAAIAARFHFGLADAFCDCALKIAKANDAQAIALGGG 736 Query: 698 VIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 V N LL L + +L P +PA DGGL+ GQ Sbjct: 737 VFQNGLLLQACLARLSASSLPVLSPAQIPANDGGLAYGQ 775 >UniRef50_B2TM80 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Clostridium botulinum RepID=B2TM80_CLOBB Length = 783 Score = 873 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 252/790 (31%), Positives = 402/790 (50%), Gaps = 59/790 (7%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQ 63 + + G+VQGVGFRPFV+++A + N+ G V N +GV++ + + ++F++ L Sbjct: 3 KRKYILVNGRVQGVGFRPFVYRIACKNNIKGYVKNTCNGVQIDVEGLEENIKSFIMDLDS 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNT-PGE 121 CP + +I+ ++ + +F I +S T I PD A C C E+ E Sbjct: 63 KCPKVCKINEIDINDIKYMNYYNDFQILESDNNYKGETLISPDIAICDECYKELFNISEE 122 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY Y FINCT+CGPRFTII+ +PYDR T M F + C EY D L+RRFHA+P C Sbjct: 123 RRYLYSFINCTNCGPRFTIIKKLPYDRCNTTMKKFVMYNKCRSEYYDKLNRRFHAEPTCC 182 Query: 182 PECGPHLEWVSH-GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP L+ V G + + L+ LK G+I+A+KGIGGF+L CD +N +++ LR Sbjct: 183 VNCGPKLKLVDRFGRKIKCDDVLRITRQYLKEGRIIALKGIGGFNLICDGKNKSSIDVLR 242 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 RK+RP KPLA+M+ D + + ++L PI+L++K+ L +I Sbjct: 243 KRKNRPQKPLALMMRDIDVVNKYCFVNEKENEILQGSKKPIILLNKREN-NLPKNIVFKN 301 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 N++G++LP +PL LL LV TSGN++ P N++A +L IAD FLIH+R+ Sbjct: 302 NKLGIVLPYSPLHVLLFDNELEVLVFTSGNINQMPIEYKNDEAFNNLNDIADYFLIHDRE 361 Query: 355 IVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I +DDSVV+ ++R RGY P ++ + VL LG+ LKNT + G Sbjct: 362 INASIDDSVVKVFMNKELVIRSGRGYAPISIRS----NSEEGVLALGSQLKNTLSISSGN 417 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWARE------ 465 +S ++GD+ + +++ L+L++++YD + +D HP Y ++ + + Sbjct: 418 NIFISPYVGDMENLETIDRFKRNLKLIRSLYDIKINTICYDMHPNYFNNYFLEDNLNDMD 477 Query: 466 -----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 M + HHHAH A+C+ ++ VI + DG G GE+ +WGGE L Sbjct: 478 IKESNMKFKKIGIYHHHAHIASCMFDNDIQ---EPVIGIAFDGTGYGEDKKIWGGEFLIC 534 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---------WQNYSETASVQ 571 +Y++ + +G L + LPG D K PW+ ++ + ++NY+ Sbjct: 535 DYKKFKRVGCLKYMNLPGNDGGIKMPWKMGMSLLKGALKNNIVSKNLNIFKNYNLPDCFN 594 Query: 572 QQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH- 630 +N+ ++++ I+R IN SS GR FD VA+ LG ++YEGEAA LE +A++ Sbjct: 595 LENYELISKIIDRNINTSETSSMGRLFDGVASLLGFT-NNVTYEGEAAIYLENIASTYII 653 Query: 631 ---------GVTHPVTMPRVDNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAA 678 ++ + +DL + L + + + FH+ + + Sbjct: 654 NSVESVYKLSYSYNLKFNDEKYIIDLDEMILEILEDLKNEESLGLISIKFHNTITEFSID 713 Query: 679 LMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGV 736 L ++ I + SGGV N +L L L DF +L +P D G+SLGQ + Sbjct: 714 LCKKLRKQYNINKVALSGGVFQNDILLKNLYLKLEENDFNVLIHGEIPCNDSGISLGQLI 773 Query: 737 IAAARWLAGE 746 IA + Sbjct: 774 IANELIKSHN 783 >UniRef50_C0QLW6 HypF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLW6_DESAH Length = 733 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 282/732 (38%), Positives = 393/732 (53%), Gaps = 39/732 (5%) Query: 40 CNDGDGVEVRLREDPETF---LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIR--QST 94 N GV + L DP+ ++ + PPLA + +V EP + +F I S+ Sbjct: 2 LNTAQGVTLILEGDPDNIAPCCKKIKESGPPLAIVSTVNVEP-TGVRGYDDFRIITSASS 60 Query: 95 GGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMA 154 + I PD + C ACL EMN P RR+ YPFINCT+CGPR+TII+ +PYDR T MA Sbjct: 61 NQPRSALISPDVSVCQACLDEMNDPTNRRHGYPFINCTNCGPRYTIIKDLPYDRAKTSMA 120 Query: 155 AFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA-EQEAALQAAIAQLKMG 213 F +CP C EY DPL+RRFHAQP AC CGPH+ + + A+ AA L G Sbjct: 121 EFTMCPDCQAEYDDPLNRRFHAQPNACEVCGPHVWLTDNRGVVLLNKGAITAAGEHLNQG 180 Query: 214 KIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDA------ARQL 267 IVA+KG+GGFHL +A + AV LR RK+RP KP A+M + L L Sbjct: 181 AIVAVKGLGGFHLGVNAFDEAAVMALRTRKNRPHKPFALMARDLETLRKYTKVTQPEEAL 240 Query: 268 LTTPAAPIVLVDKKYVP-----ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTS 322 LT PIVL++K L +AP +G+MLP PL HLL + LVMTS Sbjct: 241 LTAFHRPIVLLEKYKCTDPGGRPLASGLAPGNRRLGIMLPYTPLHHLLFETGPEMLVMTS 300 Query: 323 GNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE--SGEMLRRSRGYVPD 380 GN SG+P +I N+ AL+ IAD FL+HNR+I R DDS+V+ LRRSRGY P Sbjct: 301 GNRSGQPLSIDNDDALSAFAHIADFFLLHNREIYFRADDSIVQYQKGTRFLRRSRGYAPL 360 Query: 381 ALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQN 440 + +P VL G LK+T CLV+ +A LSQH+GDL D+ +++++ ++ Sbjct: 361 PV---SLKHRIPQVLACGGGLKSTVCLVKENRAFLSQHIGDLDDEKSFEFYKKSVDHLKT 417 Query: 441 IYDFTPQYVVHDAHPGYVSSQWAREM-NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 I D P V HD HPGY+S+ +AR + + T V HHHAHAAAC+AE+ V+A+ Sbjct: 418 ILDIRPGIVAHDLHPGYMSTTYARALKGVETIGVQHHHAHAAACMAENGLD---EPVVAV 474 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 TLDG G+G + +WGGE L E L +V +PGGD AA +PWR ++ + Sbjct: 475 TLDGTGLGTDNTIWGGEILTCTLDRFERRAHLLSVPMPGGDKAATEPWRMGISWLYHCLG 534 Query: 560 ---EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + ++ + + L + ++R IN P+ SSCGR FDAVAA LG +++E Sbjct: 535 PGVADLDTPLVRTIDPEKIAFLIQMMDRRINCPMTSSCGRLFDAVAAILGLGHH-VTFES 593 Query: 617 EAACALEALAASCHGVTHPVTMPRVDN---QLDLATFWQQWLNW---QAPVNQRAWAFHD 670 +AA ALEAL+ + + + + + +D + ++ + FH+ Sbjct: 594 QAAMALEALSTAEDDKGYKIDIQTDETGMLVMDFSRAILGIVDDLALGLSIPNLGSKFHN 653 Query: 671 ALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDG 728 + F ITT V SGGV +NR++ ++ L FT+ +P GDG Sbjct: 654 TVVDSFVRSAARVGEQAHITTAVLSGGVFNNRIILRKMTDGLRDLGFTVYSHTRVPCGDG 713 Query: 729 GLSLGQGVIAAA 740 G+SLGQ V+A A Sbjct: 714 GISLGQAVVAGA 725 >UniRef50_C5U5I7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5I7_9EURY Length = 725 Score = 872 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 269/744 (36%), Positives = 397/744 (53%), Gaps = 49/744 (6%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHCPPL 68 ++R+ G VQGVGFRPF++ LA+ NL G V N G VE+ + D E+F+ + + P L Sbjct: 3 RIRVEGIVQGVGFRPFIYNLAKSYNLKGYVKNCGTYVEIVVSGDNIESFIKDIERKKPEL 62 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 A+I+ + E F ++F I +S G N+ I PD A C CL EM +RRYRYPF Sbjct: 63 AKINKIVVEDFE-GNEFSDFYILESDGFGGNSAIPPDIAICNLCLKEMFDKKDRRYRYPF 121 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+C +CGPRFTI +P+DR T M FPLC C KEY DP DRRFHAQ CP+CGP + Sbjct: 122 ISCINCGPRFTITEKLPFDRENTSMKDFPLCEECLKEYEDPRDRRFHAQTTCCPKCGPRV 181 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 E + A++ AI L+ GKI+AIKGIGG+HL C A V LR +RP++ Sbjct: 182 FLNDK----EGDEAIKEAIKLLEKGKILAIKGIGGYHLFCRADRDEPVLRLREILNRPSQ 237 Query: 249 PLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P AVM + L LLT+ PIV++ K L + ++ +L+ VGVMLP Sbjct: 238 PFAVMSLIEEVKKFAILSKEEEILLTSRERPIVVLKKSKDYYLSEYVS-NLDTVGVMLPY 296 Query: 304 NPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV 363 L +LL ++ V TS NL G P AI + + DG+L+HNR I+ R DDSV Sbjct: 297 TGLHYLLFNKVP-AYVATSANLPGLPMAIDEGEIVKL---KVDGYLMHNRRIINRCDDSV 352 Query: 364 VRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 V+ LRRSRGYVP+ + + N LC+GA+L +T CLV+G + LSQH+G Sbjct: 353 VKYIAGRAIFLRRSRGYVPEPIEVEIK--NDFTFLCVGAELNSTVCLVKGNKFYLSQHIG 410 Query: 421 DLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAREM----NLPTQTVLH 475 + S + +EA++ + + + ++V D HP Y S++ A E+ N+P V H Sbjct: 411 NTSKYETFLFLKEAIKRLMELTNTDKIDFIVSDLHPLYNSTKLAEELSEKFNVPLIKVQH 470 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AH + L ++ + I L LDG+G G +G +WGGE L+ + + + +G L Sbjct: 471 HFAHGYSLLGDNN---YFDECIILALDGLGYGLDGKIWGGEILKFDSGKFKRVGHLEEQY 527 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 PGGDLA K P+R LL+ + + + + + +L I++ IN+P+ +S G Sbjct: 528 QPGGDLAVKYPFRMLLSILYKAIGDE------VFEKFEVNKILEMQIKKRINSPITTSTG 581 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQ-- 653 R DA+++ L +YEGE A LE A + P +N L ++ Sbjct: 582 RVLDAISSLLDICQEK-TYEGEPAIRLEGRAKEFNIEVEP---KIKNNILLTTPLVEECY 637 Query: 654 -WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 L + P+ + A+ LA G + ++ + T+ +GGV +N+++ R+ Sbjct: 638 NMLINKEPIEKIAYYSLIYLADGLFEIAKKFS-----DTIGITGGVSYNKIIVERIKERC 692 Query: 713 AD--FTLLFPQSLPAGDGGLSLGQ 734 + L+ +P GDGG+S GQ Sbjct: 693 EEEKIKFLYHSRVPNGDGGISFGQ 716 >UniRef50_A5I2V8 Hydrogenase maturation protein n=8 Tax=Clostridium RepID=A5I2V8_CLOBH Length = 812 Score = 868 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 259/794 (32%), Positives = 401/794 (50%), Gaps = 71/794 (8%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQ 60 N+ ++I G VQGVGFRPFV+ A + NL G V N G VEV L + ++F+++ Sbjct: 10 NSKKRYLIKIEGIVQGVGFRPFVYNRATEFNLKGYVKNKGGMVEVDLEGYKENIKSFILE 69 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTP 119 L + P +A+I+ ++ + +FTI++S+ + I PD A C C+ E+N Sbjct: 70 LIKSPPIMAKIEDLKCKFLKP-IDYKDFTIKKSSNEKNSVKFISPDVALCKNCIKELNLS 128 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 +RY Y FINCT CGPR++II+++PYDR T M F +C +C +EY P +RRFHA+P Sbjct: 129 TNKRYEYGFINCTDCGPRYSIIKSLPYDRENTTMKKFTMCNSCKEEYNIPDNRRFHAEPN 188 Query: 180 ACPECGPHLEWVSHGEH-----------------------------------AEQEAALQ 204 C CGP L + + + + ++ + Sbjct: 189 CCSLCGPSLILLDNKKQVICTNSKKEYINNTSNNNYYNENKIHESYINVANLSYKKHPIY 248 Query: 205 AAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------ 258 AI +K G IVA+KGIGGFHL CD +N A+ LR RK RP KPLA+M Sbjct: 249 TAIELIKKGYIVAVKGIGGFHLVCDGKNKKAIENLRIRKKRPHKPLAIMCKDLKIVKELC 308 Query: 259 GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPL 318 + Q+L PI+++ KK L D+I+P +GVMLP +PL +LL +E + Sbjct: 309 YVSKLEEQILEGTKKPILILKKKATNILPDNISPFNKHLGVMLPYSPLHYLLFKEGLDII 368 Query: 319 VMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSR 375 + TSGN+SG+P N +A+ +L+ IAD FLIHNRDI +DDSVV+ ++R R Sbjct: 369 IATSGNVSGRPMEYKNCEAIENLKTIADYFLIHNRDIHTPIDDSVVKVINKKESLIRIGR 428 Query: 376 GYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREAL 435 GY P L + +L GA+ KNTFCL + +SQ++GDL + + + Sbjct: 429 GYAPYTLNIKTKN----ELLAKGAEEKNTFCLSQKGYVYMSQYIGDLKNIDCYNRHLNTI 484 Query: 436 RLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGD 495 +Q + D P+ + D HP + ++ + + V HHHAH +C+ EH Sbjct: 485 EHLQTLLDTNPKISMEDLHPNFNTNYENKNYD-RIIKVQHHHAHMVSCMVEHSL---FDR 540 Query: 496 VIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCL 555 VIA+ DG G G++ ++WGGE L + E +G L V + GGD + K+PWR L+ Sbjct: 541 VIAVVFDGTGFGKDNSIWGGEFLIGDRTYFEKVGHLKKVKIQGGDKSIKEPWRCALSYLY 600 Query: 556 RFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYE 615 ++ S +V+++ ++ +A+ IN +SS GRFFDAV + +G +SY+ Sbjct: 601 S--INYEESSIIKNVEEEKIKIIKKALYNNINCYTSSSMGRFFDAVTSLIGI-RNMVSYD 657 Query: 616 GEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHD 670 G+A LE + + + ++ ++DN Q+D + ++ + FH+ Sbjct: 658 GQAPIELENIIDEPISLYYNYSINKIDNVFQIDYKDIILGIIKDLKENKDLSTISSKFHN 717 Query: 671 ALAQGFAALMREQATMR----GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLP 724 + L+ + + +V SGGV N L + L F + F + +P Sbjct: 718 TVIDFTCNLVCKIKKTYEMKCKLDNVVLSGGVFQNNYLLKGVYRTLKDNGFKVFFNEKVP 777 Query: 725 AGDGGLSLGQGVIA 738 D G+SLGQ I Sbjct: 778 INDEGISLGQLAIG 791 >UniRef50_C1A5F1 Hydrogenase maturation protein HypF n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5F1_GEMAT Length = 859 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 308/830 (37%), Positives = 399/830 (48%), Gaps = 99/830 (11%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 + V +R+RG VQGVGFRPFV +LA +L G+V N GDGV V L + E FL L Sbjct: 15 ATTRVVVRLRGTVQGVGFRPFVHRLAIRLGARGEVRNVGDGVLVELEGEPGVIEQFLAAL 74 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-------------TQIVPDAAT 108 + P ARI+S+E Q F I S + PD AT Sbjct: 75 SREAPRAARIESMEVH-AEQPQGVKGFRIAGSRTHDEAMPGNGKVLAFARVAAVPPDLAT 133 Query: 109 CPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRD 168 C C E + P +RRYRYPF+NCT CGPRFTI+ +PYDR T M F +C AC +EY D Sbjct: 134 CSDCWREFHNPADRRYRYPFLNCTQCGPRFTIVIGVPYDRALTTMRRFTMCVACQREYDD 193 Query: 169 PLDRRFHAQPVACPECGPHLEW----------------VSHGEHAEQEAALQAAIAQLKM 212 P RRFHA+P AC +CGP + W V H A E AL+AA+ L+ Sbjct: 194 PTHRRFHAEPNACADCGPQVAWSVVRRADTDMREPALPVVHATDARNENALRAALTVLRA 253 Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVA------DGLPDAARQ 266 G IVA KGIGG+HL CDARN++AVA LR RK RP KPLAV++ + +A Sbjct: 254 GGIVAAKGIGGYHLLCDARNADAVARLRLRKDRPHKPLAVLVDTLSTLRTFADVRASAVV 313 Query: 267 LLTTPAAPIVLVD--KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGN 324 L +PA PIVLV K L ++AP L+ VGVMLPA PL LL PLV TSGN Sbjct: 314 SLESPAHPIVLVPTSKGAAQPLAHNVAPGLDSVGVMLPAFPLHALL--AADGPLVCTSGN 371 Query: 325 LSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV----RESGEMLRRSRGYVPD 380 LS +P A + AL L +ADGFL HNR+IV DDSVV + +RRSRGY P Sbjct: 372 LSDEPIAWRDVDALRRLAVLADGFLTHNREIVLPCDDSVVSIGDDGHEQPVRRSRGYAPY 431 Query: 381 ALAL----PPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALR 436 + + P + VL +GA+LK+T + +Q LS H+GD+ A Sbjct: 432 PIPVAASLPASIRASASVLAVGAELKSTAAWLAADQVTLSSHIGDVGSPETLEALTLATG 491 Query: 437 LMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLD 492 ++ ++ + D HP Y SS+WA E V HHHAH AA +AEH P Sbjct: 492 QLEAMHHGRADVIACDLHPEYHSSRWAAERARQSGATLVRVQHHHAHLAALMAEHGLPG- 550 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 ++A T DG G G +G +WGGE L + + L L GGD A +QP R L Sbjct: 551 STPILACTFDGTGWGTDGTVWGGEMLLGDCTGFTRVASLTPFPLAGGDAAVRQPLRGALG 610 Query: 553 QCLRFVPEWQNYSETASVQQQNW-----SVLARAIERGINAPLASSCGRFFDAVAAALGC 607 R + + + + ++ + +ERGI SS GRF DA A G Sbjct: 611 LLHRHGHDVSDNAIAPMLHHTELTSEARRLMIQQLERGIACVETSSMGRFLDACAVLCG- 669 Query: 608 APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ-----------------LDLATF 650 PA +SYEG+AA LE LA G ++ ++ A Sbjct: 670 GPAKVSYEGQAAILLEVLARQYPGTRMRAGYNIDVHEGPASSVNRDGVHAPRWLMNPAPM 729 Query: 651 WQQWL------------------NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 Q L W + AW HDA+A+ + G + Sbjct: 730 LQALLWDMQAEVSASRSLNRTQDAWADAIAPIAWHVHDAVARVVVDIALRVRRDHGTNHI 789 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 +GGV N+LL A L F +L + +P DGGL+LGQ +IAA Sbjct: 790 GLTGGVFQNQLLSTLTARALETDGFEVLQHRRVPCNDGGLALGQALIAAH 839 >UniRef50_Q2JBM2 (NiFe) hydrogenase maturation protein HypF n=19 Tax=Bacteria RepID=Q2JBM2_FRASC Length = 816 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 311/789 (39%), Positives = 400/789 (50%), Gaps = 54/789 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQ 63 + ++G VQGVGFRPFV A +L L G V ND GV + P E F +L Sbjct: 33 ARRRFVVQGLVQGVGFRPFVHAAATELALTGWVRNDTGGVVAEVEGTPGAVEDFARRLRC 92 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLA ++ V + F I +S T PD ATCP CL E+ P +R Sbjct: 93 DVPPLAMVERVVTTELPPCGG-SGFAIVRSRPAAGGRTAAAPDVATCPDCLRELADPADR 151 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYR+PFI CT+CGPRFTII +PYDRP T MA F +CP C++EY DP DRRFHAQP+ACP Sbjct: 152 RYRHPFITCTNCGPRFTIITDLPYDRPATTMARFAMCPVCEREYSDPADRRFHAQPIACP 211 Query: 183 ECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP LE+VS E AL AA L G ++A+KG+GG+HLAC A + AV TLR Sbjct: 212 ACGPRLEFVSPLGAPRTGEDALAAARRLLADGGVLAVKGVGGYHLACVATDPTAVTTLRR 271 Query: 242 RKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAPD 293 RK R KP AVM+ + + LLT PA PIVLV ++ P L D +APD Sbjct: 272 RKRRGGKPFAVMVHDLAAARALAHVDEREAALLTDPARPIVLVRRRRDGRPALADSVAPD 331 Query: 294 LNEVGVMLPANPLQHLLLQELQC--------------PLVMTSGNLSGKPPAISNEQALA 339 ++G++LP P+ HLLL PLVMTSGNL G+P A + AL Sbjct: 332 NPDLGLLLPYTPVHHLLLGLPGEPVPLHRTVGTAGWPPLVMTSGNLGGEPIAAEDTDALR 391 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLC 396 L + DG+L H+R I DDSVVR + +RRSRGY P + LP VPP L Sbjct: 392 RLAPLVDGWLRHDRPIRVPCDDSVVRVVDGAPSPVRRSRGYAPLPVPLP---FEVPPTLA 448 Query: 397 LGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPG 456 +GADLKNT L G A LS H+GD+ D + A R ++++ TP+ +V DAHPG Sbjct: 449 VGADLKNTCGLGAGRSAWLSGHIGDMDDLATLRAFDAAERHLEHLTGVTPRQLVTDAHPG 508 Query: 457 YVSSQWAREM--NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWG 514 Y S QWA P +TV HHHAH AA +AEH V+ DG G G + A+WG Sbjct: 509 YRSRQWAVRHAAGRPIRTVQHHHAHVAALMAEHGLDG-TRPVVGFAFDGTGYGPDRAVWG 567 Query: 515 GECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQ 573 GE L +YR L V L GGD A ++P R LA W + Q Sbjct: 568 GEVLIADYRGFRRFAHLGYVPLAGGDAAVRRPCRMALAHLHAAGVRWDPTLPPVVACPQP 627 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC---- 629 VL + G+ SS GR FDAV++ LG + +E +AA LEA A + Sbjct: 628 ERRVLTHQLASGLGCVPTSSMGRLFDAVSSLLGIRHE-VDFEAQAAIELEARARTAAGGG 686 Query: 630 --HGVTHPVTMP----RVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALM 680 H + +D A + L+ V+ A FH A+ L Sbjct: 687 ADDRERHAFALRGQGLGRPLIIDPAPVIRAMVRDLSAGLAVDIAAVRFHTAVVAMIVDLA 746 Query: 681 REQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 R G+ + +GGV N +L + L FT+L +P DGG++LGQ ++A Sbjct: 747 RRARGEVGLDLVGLTGGVFQNAVLTTAASRALHAGGFTVLRHARVPPNDGGIALGQLLVA 806 Query: 739 AARWLAGEV 747 AAR E Sbjct: 807 AAREKTREK 815 >UniRef50_A6LCY2 Hydrogenase maturation factor n=5 Tax=Bacteroidales RepID=A6LCY2_PARD8 Length = 760 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 274/769 (35%), Positives = 394/769 (51%), Gaps = 43/769 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 MAKN L I+G VQGVGFRPF++++A+ L + G V N +GV + + P+ Sbjct: 1 MAKNKVYA--LIIQGLVQGVGFRPFIYRIAKDLGMKGCVENMNNGVRILVAATPDDRDLL 58 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFT-IRQS-TGGTMNTQIVPDAATCPACLAE 115 + ++ P +A I + + + I S + TQ+ PD A C C+ + Sbjct: 59 ISRIRTEHPRVAYIHRISYTSTEMDEDDFDDFTITPSHSESDEVTQVSPDIAVCADCMRD 118 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 T R YPFINCTHCGPRF+IIR +PYDR T M F +CP C+KEY + +DRRFH Sbjct: 119 -RTTQPHRIGYPFINCTHCGPRFSIIRDLPYDRSQTTMGGFLMCPDCEKEYTNVIDRRFH 177 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGK-IVAIKGIGGFHLACDARNSN 234 AQPVAC CGP + E L ++L +G ++A KGIGG+HL CDA N Sbjct: 178 AQPVACNHCGPTYYATYNEETYIDYETLLKLTSRLLLGGEVIAAKGIGGYHLICDASNER 237 Query: 235 AVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCD 288 AVA LR K R KP AVM + L + L + PIVL+ ++ L Sbjct: 238 AVARLREIKQRDTKPFAVMFRDLEHLQVYTATEPMEERCLVSWRRPIVLLRQR--SRLAS 295 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADG 347 I P ++ +G ML P+ + P LVMTSGNLS P AI+ E A A L G Sbjct: 296 GINPGMHTLGCMLSYMPIHYDWFARTGIPALVMTSGNLSDLPIAITPEDAEAQLAGKVAI 355 Query: 348 FLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 L HNR I R+DDSV++ G ++RRSRGYVP+ NV ++ GA+ NT Sbjct: 356 LLHHNRPIHNRVDDSVLQVCGGQPCLIRRSRGYVPEPFFTDT---NVEGIMAFGAEKVNT 412 Query: 405 FCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR 464 F L +GE + SQ++GDL + + E++ ++++ F Q +V D HP Y+SSQ A Sbjct: 413 FALGKGETILQSQYIGDLKNWETFRFYTESMERFRHLFRFNLQRLVCDLHPDYLSSQEAE 472 Query: 465 E----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 ++LP V HHHAHAAAC+ EH V+A+ +DG G+G++G +WGGE Sbjct: 473 RISKSLSLPLLKVQHHHAHAAACMLEHGL---NEPVLAIVMDGTGLGDDGKVWGGEFFFC 529 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA-----SVQQQNW 575 + + L V LPGGD AA++PWR ++A + + + + + Sbjct: 530 DRAKYRRLSHFEYVPLPGGDKAAEEPWRMVVAYLWHYFKDEPSGIPYPADFVERIGTERI 589 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 ++L R +E+G+N P SS GR FDAVA+ LG + S++ EA LE A + Sbjct: 590 AMLERMMEKGVNTPYTSSAGRLFDAVASLLGICDVS-SHQAEAPVLLEQAAM-GERNAYA 647 Query: 636 VTMPRVDNQLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + ++ + ++ L+ + PV+ + FH LA F R T + Sbjct: 648 YPVSAEGEEISFYSLFEALLHDKTNEVPVSLISARFHTTLASLFVQKARLLIKRTKATQV 707 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 V SGG N+LL + A + P +P DGG+++GQ IA+ Sbjct: 708 VISGGCFQNKLLTESMRRQFIMAGVPVYIPSRIPCNDGGIAVGQLTIAS 756 >UniRef50_UPI0001BCDBC7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCDBC7 Length = 780 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 292/773 (37%), Positives = 388/773 (50%), Gaps = 40/773 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQL 61 R+ G VQGVGFRPFV++LA +L+L G V ND GV + P ++F L Sbjct: 14 ARQRRAFRVSGIVQGVGFRPFVYRLAVRLSLGGWVLNDSAGVGIEAEGTPAALDSFGEAL 73 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPG 120 P A + +V F I S G T + PD A C C E+ + Sbjct: 74 RTQAPLAAAVTAVTYTETAIL-GEVLFRILPSPAGEPARTLVSPDLAVCADCRREILSET 132 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RR Y F NCT+CGPR++IIR +PYDRP T MAAF +CPAC EY DP DRRFHAQP A Sbjct: 133 DRRQGYAFTNCTNCGPRYSIIRGVPYDRPLTSMAAFHMCPACQHEYDDPADRRFHAQPNA 192 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C CGP + + A L+ A + G IVAIKGIGG+HLACDAR+ AV LR Sbjct: 193 CAACGPSYQLL-AEGAAADGNPLEKAREIIAAGGIVAIKGIGGYHLACDARSDEAVTRLR 251 Query: 241 ARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAP 292 RK R AK LAVM + + + + L +PAAPIVL+ ++ + +AP Sbjct: 252 RRKRREAKALAVMAGALETVRRLCAVSEEEERWLASPAAPIVLLQRRPDAEDAVAPSVAP 311 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 +GVMLP P+ LLL VMTS NLSG+P + A L IAD L+HN Sbjct: 312 GNPCLGVMLPYAPIHFLLLAP-DDLWVMTSANLSGEPIIYDDAAAEQGLAEIADAILMHN 370 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+IV R+DDSV+R +++RRSRG+ P L F VL GA+LK+TFCL R Sbjct: 371 REIVHRVDDSVLRMMAGGRQIVRRSRGFAPTPL--ALPFAPQASVLAGGAELKSTFCLTR 428 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G +A LS+H+GDL+ + + E + + ++ P+ + D HP Y+S + A Sbjct: 429 GNEAFLSEHIGDLTHRSVLASYEETIAHYEQFFETKPELLAADLHPAYLSGRCLAARAER 488 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +P V HHHAH AA LAEH V+ LDG G G++G WGGE L + Sbjct: 489 EGIPLVRVQHHHAHIAAVLAEHACH---ERVLGAALDGTGWGDDGTAWGGEFLAADMAGY 545 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ--NYSETASVQQQNWSVLARAIE 583 E L + LPGGD AA++PWR L E + A+ W +L +A Sbjct: 546 ERLAHFACIPLPGGDRAAEEPWRLALWVLYGLHGERLAMHAPGFAAQLPAGWQLLMQATA 605 Query: 584 RGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT--HPVTMPRV 641 G++APL SS GR FDA AA LG YEG+AA LE A + P + Sbjct: 606 AGVSAPLTSSAGRLFDAAAALLGVCLVNR-YEGQAAIELELRARTAQREGRILPYVLRGA 664 Query: 642 DNQL--DLATFWQQWLNWQAPVNQ-----RAWAFHDALAQGFAALMREQATMRGITTLVF 694 + D + ++ RA FH +A A ++ A G+ T Sbjct: 665 PGAMTADFLPVLNALADGAEQISAEERAGRALDFHVTMAAAVAEVLGVLAVHTGLRTAAL 724 Query: 695 SGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 +GGV N LL ++ + + +L P P DGG++ GQ A AR G Sbjct: 725 AGGVFQNALLLEQVLARIGGDYRVLLPHLAPPNDGGIAYGQAAAALARMKNGR 777 >UniRef50_Q46FH7 Hydrogenase maturation protein n=3 Tax=Methanosarcina RepID=Q46FH7_METBF Length = 767 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 270/772 (34%), Positives = 402/772 (52%), Gaps = 34/772 (4%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQ 60 + L I G VQGVGFRPF+ QLA+ L G V N G+ VE+ + + + F+ + Sbjct: 1 MQNEARLLHITGTVQGVGFRPFISQLAKVHGLFGYVKNLGNYVEILVEGNKESLDNFIKE 60 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTP 119 + + PPLA++ ++ + + ++F I S G N+ I PD A C C +E+ P Sbjct: 61 IPEKKPPLAKVKEIKTKNTPFF-GYSKFIIVPSESGVFENSIIPPDTAICEQCRSEIFDP 119 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 R + YPF CT+CGPR+T +R +PYDR T MA FPLCP C+ EY DPL+RR+HAQPV Sbjct: 120 SSRYFHYPFTVCTNCGPRYTTVRTLPYDRENTTMADFPLCPECETEYTDPLNRRYHAQPV 179 Query: 180 ACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 CP+CGP + + + A+ A L+ G I+AIKG GGFH+ACDAR V Sbjct: 180 CCPKCGPEIWLSDSEGNVLVKGYEAIIHASDLLQQGSILAIKGFGGFHIACDARKEMPVN 239 Query: 238 TLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR R RP +P AVM A+ L R+ LT+ PI ++ L + + Sbjct: 240 ELRRRLRRPEQPFAVMAKNAEVAETFAELEGVGREYLTSYRRPITVLPSSRESGLAESVT 299 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPL-VMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 L+ +GVMLP Q+LL + + VMTS NL G+P + N++AL L+GI D +L+ Sbjct: 300 SGLHNIGVMLPYTGTQNLLFDRVPDAVYVMTSANLPGRPMVVENKEALEKLKGIVDYYLL 359 Query: 351 HNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I R DD+V+R +RRSRG+VP+ + LP K + +GA++ +T + Sbjct: 360 HNRVIANRNDDTVIRVVNGKAAFIRRSRGFVPEPVELPFEVKAS---IGVGAEMNSTVTV 416 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 +G+ A +SQ++G+ S E +R + + P Y D HP + ++++A +M Sbjct: 417 AKGKLAYVSQYIGNTSHVETFRYHSEVVRHLIQLTGIEPLYWGCDLHPAFNTTRFALKMG 476 Query: 468 LP-TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 T V HH AH A +A++ PLD ++ + LDG+G G +G +WGGE +Y E Sbjct: 477 GEDTLQVQHHQAHMLALMADNSLPLDS-RILGIALDGVGYGTDGTVWGGELFESSYFGYE 535 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP--EWQNYSETASVQQQNWSVLARAIER 584 +G L +PGGDLA++ P R +L + E + + +S + + +E Sbjct: 536 RIGHLFPQPMPGGDLASRIPSRMVLGILFEKLGRAELEKLPLSFPKGAMEFSTVMKQLET 595 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-SCHGVTHPVTMPRVDN 643 G+N +SS GR DA AA LG +YEGE A LE+ A S H V P+ ++ Sbjct: 596 GVNVIRSSSTGRVLDAAAALLGICEIR-TYEGEPAMKLESAATKSTHSVDLPIIFTNDND 654 Query: 644 Q----LDLATFWQQW--LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 LD L+ + P A+A ++ A G + L A RG+ + SGG Sbjct: 655 SGVPLLDTTELLLGAYELSGKYPPVDLAFAVEESFATGISELAISLAAKRGLEKIGLSGG 714 Query: 698 VIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 V +N + + +A + A F L + +P GDG +S GQ + A Sbjct: 715 VAYNNHITSCIARTVTEAGFEFLVHRQVPCGDGCISFGQALAAGLSTKPENK 766 >UniRef50_D1VJK4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Frankia sp. EuI1c RepID=D1VJK4_9ACTO Length = 807 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 288/811 (35%), Positives = 397/811 (48%), Gaps = 90/811 (11%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLAR 70 G +G PFV+ LA + +L G+V N GV + + F++ L PPLA Sbjct: 3 TGSCRGWVSAPFVYALASREHLVGEVANSPAGVHIEASGSAAALDAFVIALRDEAPPLAV 62 Query: 71 IDSV-----------------------EREPFIWSQLPTEFTIRQST-GGTMNTQIVPDA 106 ++ V R P + F I S G +T + D Sbjct: 63 VEDVVVRRRPPPDGRRASGPGGADGGGTRAPRPGAPTAAGFRITASDPAGERSTLVSADC 122 Query: 107 ATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEY 166 ATC CLAE+ P +RRYRYPFINCT+CGPRFTIIR +PYDRP T MA F +CPAC EY Sbjct: 123 ATCADCLAELADPADRRYRYPFINCTNCGPRFTIIRDVPYDRPATTMAGFAMCPACAAEY 182 Query: 167 RDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 DP +RRFHAQPV CPECGP L + ++ + L+ G ++A+KG+GG+HL Sbjct: 183 HDPGNRRFHAQPVCCPECGPRLRLLDRAGRPLDADPIERSAELLRAGAVLAMKGLGGYHL 242 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLV-D 279 A DAR+ A A LR RKHR KP AVM+ + A +LLT PIVL+ Sbjct: 243 AVDARSDAAAARLRGRKHRADKPFAVMVSDVAAARELCAVGPVAERLLTGRRRPIVLLDL 302 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 P + +AP ++G+M P P HLLL PLV+TSGN+S +P +++A Sbjct: 303 LPGGPGVARSVAPGTRQLGLMTPYTPAHHLLLAAFSGPLVLTSGNVSDEPIVYRDDEAFG 362 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRESG------------------------------- 368 L IAD FL+H+R I R DDSVVR Sbjct: 363 RLGPIADYFLVHDRPIHVRADDSVVRVLPSWPGEPRRERPPAGEPSRRPTNKPGSPAAGE 422 Query: 369 --EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 +++RR+RGY P+ L G++ PVL GA+LK+TFCL RG A +SQH+GDL + Sbjct: 423 REQLVRRARGYAPEPL--AMGWETPRPVLACGAELKSTFCLTRGRYAFVSQHIGDLENYE 480 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAA 482 + + + ++D P+ + HD HP Y+S+++ A + L V HHHAH A+ Sbjct: 481 TFRAFTAGVAHYERLFDVRPEVIAHDLHPEYLSTKYALDRAEDDGLGVVGVQHHHAHIAS 540 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLA 542 CLA+++ G V+ L DG+G G +G LWGGE L + L L VA+PGG A Sbjct: 541 CLADNRH---SGPVLGLAFDGLGYGTDGTLWGGEVLLADLTRFTRLAHLDPVAMPGGAAA 597 Query: 543 AKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVA 602 + PWR A + + +W + +RG+ APL SS GR FDAVA Sbjct: 598 IRSPWRMAAAYLSAAGVDTAGLAVRER-NAAHWESVVAMADRGVAAPLTSSAGRLFDAVA 656 Query: 603 AALGCAPATLSYEGEAACALEALAASCHGVTHPVT-------MPRVDNQLDLATFWQQWL 655 A L T++YEG+AA LE LA ++P+ ++ + Sbjct: 657 AILDVRD-TVNYEGQAAIELEQLADQAERESYPLPGIVRPPRPAVDPGRIQGTDLVAAVV 715 Query: 656 NW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL 712 + A FH LA+ + A G+ SGGV N+ L + L Sbjct: 716 EDLRAGTDRARVAARFHATLARTIVTVCECLAEQTGVRAAALSGGVFANQRLLNEVGAGL 775 Query: 713 --ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 A T+L +P DGG+SLGQ +A+A+ Sbjct: 776 RAAGLTVLTHSRVPTNDGGISLGQAAVASAQ 806 >UniRef50_Q31DZ8 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DZ8_THICR Length = 775 Score = 865 bits (2237), Expect = 0.0, Method: Composition-based stats. Identities = 276/777 (35%), Positives = 388/777 (49%), Gaps = 51/777 (6%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + S ++L+I G+VQGVGFRPF++QLAQ L LHG V N+ GV V+L+ P+ F Sbjct: 1 MTLDASIQLRLQIFGRVQGVGFRPFIFQLAQSLGLHGSVANNTQGVVVQLQGSPQAIQQF 60 Query: 58 LVQLYQHCPPL----ARIDSVEREPFI--WSQLPTEFTIRQS---TGGTMNTQIVPDAAT 108 L P A +D +E +P ++ F+I S G QI PD A Sbjct: 61 QQCLTTQKPAFFPKQAVVDRIESDPVPSAEQEVFQSFSIMDSSSDDQGAQAIQISPDLAV 120 Query: 109 CPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRD 168 C CL E + P RRY PFINC+ CGPR++I+ PYDR + M F +C AC EY D Sbjct: 121 CDRCLQEFHDPNSRRYHDPFINCSDCGPRYSIVSQSPYDRLHSSMQPFSMCEACATEYHD 180 Query: 169 PLDRRFHAQPVACPECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHL 226 P +RRFH Q + C +CGP + AE E A+Q +LK +VA KG+GGFHL Sbjct: 181 PNNRRFHTQGICCQDCGPTIRLFDALQTPLAEGEDAIQQIAQRLKTSGLVAFKGVGGFHL 240 Query: 227 ACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDK 280 CDA +S V LR +KHR KPLAV+ + L +LLT+ PIVLV+K Sbjct: 241 LCDATDSETVTRLRQKKHRATKPLAVLCANLEMAQQLAHLAPHEIELLTSEVKPIVLVEK 300 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + LCD IAP++N++GV L PL HLL Q + PLV TS NLSG+P + Sbjct: 301 RSDTALCDAIAPNINQLGVFLAYTPLHHLLFQYIDFPLVATSANLSGEPILYEVSRVFEK 360 Query: 341 LQG----IADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALA-LPPGFKNVP 392 L + + L +R+IV DDS+V+ +LR RG P L Sbjct: 361 LCHPDRALVEAVLDFDREIVNPSDDSIVQSINGKPMILRLGRGLAPYYQPLLHQETNESQ 420 Query: 393 PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHD 452 VL +GA K+ G++A+LS +LG+L ++++ + ++ TP VV D Sbjct: 421 TVLAVGAQQKSAMACADGKRAMLSPYLGELGTLAAFHRFQQTFQNFTTLHHLTPNQVVSD 480 Query: 453 AHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE 508 H GY S QWA + LP TV HH+AHA AC+AEHQ V+A DG+G+G+ Sbjct: 481 LHSGYASHQWAADYAQQNALPYTTVQHHYAHALACMAEHQLESS---VLAFCWDGMGLGD 537 Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NY 564 + A+WGGE L + E + + L GGD A++QP R LA + Sbjct: 538 DNAIWGGEVLVADTAGYERVLHVKPFKLLGGDQASRQPRRVALAMLFDHYSLEAVLEFDL 597 Query: 565 SETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA 624 + QQ L ++ +N+P +SS GR FD VA+ G TL YEG++ LEA Sbjct: 598 PTVQAFSQQEIEQLYCLYQQNVNSPFSSSMGRVFDTVASLCGIV-QTLDYEGQSGLWLEA 656 Query: 625 LAASCHGVTHPVTMPRVDNQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMR 681 L + + + + Q+D +Q + ++ R F +AL ++ Sbjct: 657 LYDAAVTDAYDCRIEQ--QQIDFEPMIEQLILDHQQGVAISTRVSRFLNALVN----VID 710 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGV 736 + +V +GGV N+ L L + AD F Q P DG ++LGQ + Sbjct: 711 TISDQFKSLPVVVTGGVFQNKTLMTILENRFADKAQPFYFQQRTPLNDGSIALGQLM 767 >UniRef50_A7H7N6 (NiFe) hydrogenase maturation protein HypF n=5 Tax=Anaeromyxobacter RepID=A7H7N6_ANADF Length = 781 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 308/773 (39%), Positives = 401/773 (51%), Gaps = 43/773 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---REDPETFLVQLY 62 G ++R+ G VQGVGFRPFV++L+ L G V ND GV + + F L Sbjct: 14 VEGRRVRVTGTVQGVGFRPFVYRLSHAHGLSGRVWNDASGVTIEAFGSAGALDRFERALR 73 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGE 121 PP A ++++ EP F I +S I PD ATCPAC E+ P + Sbjct: 74 TDHPPAAVVETLRSEPIAGEPSV-GFEIVESGASSERRAAIPPDLATCPACERELRDPHD 132 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPF NCT CGPRFTI PYDRP T MA+F +C AC +EY DPLDRRFHAQP AC Sbjct: 133 RRHGYPFTNCTDCGPRFTIAHGAPYDRPATTMASFVMCEACAREYADPLDRRFHAQPNAC 192 Query: 182 PECGPHLEWVSHGE-HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 P CGP + V+ E + L G I A+KGIGGFHLACDA +S AVATLR Sbjct: 193 PACGPRVRVVARDGAPVEAADPIGHVGRALAAGAIAAVKGIGGFHLACDATSSAAVATLR 252 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV---------PE 285 ARK R KPLAVM+ D + +A LL + PIVL ++ Sbjct: 253 ARKRREEKPLAVMVRDLDEARRLAEIGEAEAALLASVERPIVLCRRRPEARFDGLTVSGS 312 Query: 286 LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 L ++APD VG++LP PL HLLL PLVMTSGNLS +P A +++AL L GIA Sbjct: 313 LAPEVAPDSPLVGLLLPYAPLHHLLLGAAARPLVMTSGNLSEEPIAFEDDEALRRLGGIA 372 Query: 346 DGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D FL+H+R I R DDSV V ++RRSRGYVP + + F PVL +GA LK Sbjct: 373 DLFLVHDRPIASRCDDSVARTVAGRPLVMRRSRGYVPRPVIVHRRF--ARPVLGVGAQLK 430 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFCL RG++AVL H+GDL + + A+ ++ P+ V D HP Y+S+++ Sbjct: 431 NTFCLARGDEAVLGPHVGDLDNLETYAAYEGAIARLEGFLALRPEVVACDLHPLYLSTRY 490 Query: 463 ARE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 ARE + +P V H A A G V+AL DG G+G +GA WGGE L Sbjct: 491 ARERAAALGVPLVEVQ---HHHAHAAAAMAEHGLDGPVLALAWDGTGLGTDGAAWGGELL 547 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW---QNYSETASVQQQNW 575 V E L + L GGD A ++PWR LA L E + +V Sbjct: 548 LVERDRFERLATFRPLPLAGGDRAIREPWRIALAAVLDAFGEDAPLEALPLFRAVPPAEL 607 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP 635 +V+ R + G+NAP A GR FDA A AL YEG+ A AL+ A +P Sbjct: 608 AVVRRLLATGLNAPPAHGAGRAFDA-AGALALGRGVSRYEGQVALALDNAATGAAEAPYP 666 Query: 636 VTMPRV--DNQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGIT 690 + +LDL W+ + AP + FH ALA+ A L+R + G Sbjct: 667 FDLDTSRPVTELDLRPLWRALVADVIAGAPPAAVSSRFHAALARAGAELVRRASRTTGRL 726 Query: 691 TLVFSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 +V +GG N L + L+ F + +P GDGG++LGQ ++A AR Sbjct: 727 PIVLTGGCFQNARLAEGILGELSLSFEVYPHGQVPPGDGGIALGQALVADARA 779 >UniRef50_A0RPH2 [NiFe] hydrogenase maturation protein HypF n=5 Tax=Campylobacter RepID=A0RPH2_CAMFF Length = 741 Score = 863 bits (2230), Expect = 0.0, Method: Composition-based stats. Identities = 230/760 (30%), Positives = 368/760 (48%), Gaps = 38/760 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLY 62 +++ I G VQGVGFRPF++ LA++ + G V ND GV++++ D E F ++ Sbjct: 1 MKSLKIEIYGLVQGVGFRPFIYYLAKKFGIFGRVFNDSQGVKIQIYADDEACDKFCKAIF 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 PPLARID + + + +F I +S I+PD A C C E +R Sbjct: 61 DELPPLARIDDFKVTGYSF--KFDDFKIIESKQALKTAPILPDFAICDECKREFYDKDDR 118 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+ +PFINCT+CGPRF+II+++PYDR T M++F +C C EY +P +RR+HAQP++C Sbjct: 119 RFHHPFINCTNCGPRFSIIKSLPYDRKNTTMSSFAMCDECKNEYSNPYNRRYHAQPISCK 178 Query: 183 ECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CGP + + + A E A++ +LK GKI+AIKGIGGFHL CDA N A+++LR Sbjct: 179 TCGPKVSFKNLDGIVLANDEEAIRLCANELKSGKIIAIKGIGGFHLVCDATNQKAISSLR 238 Query: 241 ARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 RK+RP KP A+M + + LT+ PI+L+ K L ++A +L Sbjct: 239 ERKNRPDKPFAIMCKDIQMASLVAYINEFEEDALTSNIKPIILLKSKE--ILPANLALNL 296 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 ++G+ LP L LL + + P++ TS N+SG+P I E L + DG L ++RD Sbjct: 297 KKIGIFLPPTSLHLLLFEYIDFPIIATSANISGEPIIIDFESISKKLIKVCDGALDNDRD 356 Query: 355 IVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I+ DDS+ LR SRG P + F L +G++LKN F + + Sbjct: 357 ILNPSDDSIAFVYQSYLAWLRTSRGIKPKII--HSKFDKKGCFLAIGSELKNQFAIYKDG 414 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 S ++GDL + ++ L + Y+F ++V+ D HP ++ ++ + Sbjct: 415 LIFSSAYIGDLKNKATFDRFLMVLDMFVRTYEFKFEFVIADKHPYFLHTKHFAKQGFTVH 474 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HH+AH + E+ V+ DG G G++ +WGGE + + E + Sbjct: 475 KVQHHYAHILCVMLENDIT---DSVLGFGFDGTGYGDDSHIWGGEVFICDTKNYERVAKF 531 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLA 591 L GGD A K + + ++ + + + +Q L + ++ GIN Sbjct: 532 DDFDLIGGDNAIKNIYYLTYSILCKYNIDAPKF--YSKFEQNQLLNLDKVMKSGINIIKT 589 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW 651 SS GR FDA A + +SY+ +AA LE+L +++ + D + + Sbjct: 590 SSLGRIFDAFACLV-LGINKVSYDAQAAMELESLYDDTIDISYDFCIN--DGIISYKEPF 646 Query: 652 QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + L+ + A F + +A L +V GGV N L R+ Sbjct: 647 LRALSD--SPSVAATGFINGIANLILELAELYKK-----PVVLGGGVFQNEALLKRVILN 699 Query: 712 LADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 L ++ P+ P D +++GQ ++L N Sbjct: 700 LNKNSIFFYLPKDEPVNDSSIAMGQIYFG-LKFLGYNANN 738 >UniRef50_Q31K38 (NiFe) hydrogenase maturation protein HypF n=3 Tax=Synechococcus elongatus RepID=Q31K38_SYNE7 Length = 770 Score = 862 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 278/765 (36%), Positives = 380/765 (49%), Gaps = 39/765 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ- 63 +LR++G VQG+GFRPFVW+LA++L L G V ND G ++ + + Sbjct: 8 KQERWRLRVQGVVQGIGFRPFVWRLARELGLTGWVNNDAAGAQIEVEGAIAQLQQFQQRL 67 Query: 64 --HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPG 120 P R D +++E Q EF I S +T Q+ PD A C ACL E+ Sbjct: 68 LVELPAAGRCDRLQQERLTL-QGDREFVIATSMASEQSTAQLPPDRAPCSACLRELWDLR 126 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPF+NCT CGPR +I+R +PYDR T +A FPLCP C +EY+DP DRRFHAQP+A Sbjct: 127 DRRYRYPFLNCTVCGPRASIVRQLPYDRNRTTLATFPLCPDCQREYQDPSDRRFHAQPIA 186 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP CGP L+ A+++ +L AIA L+ GKI+A+KG+GGF L DA ++AV Sbjct: 187 CPTCGPQLQLWDAQGQVLADRDRSLTEAIAALQQGKILALKGLGGFQLLVDACQTDAVQR 246 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RK RP KPLA++LP + + A +LL +PAAPIVL+ IAP Sbjct: 247 LRDRKSRPHKPLALLLPDLEAVRQLCQISAAEAELLQSPAAPIVLLRAIASEPWLAAIAP 306 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 D E+G+MLPA PL HLL ++ PLV TSGN SG P AL L IAD +L+H+ Sbjct: 307 DCCELGLMLPATPLHHLLSRDFGQPLVATSGNRSGDPLCWDEVDALESLSAIADLWLVHD 366 Query: 353 RDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I MDDSV + ++LRR+RGYVP +A+ P+L LG+ KNT + Sbjct: 367 RPIALPMDDSVTRIIDGQIQVLRRARGYVPTPIAIATP---AEPLLILGSWQKNTPAIAA 423 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 Q L+ ++GDL + + ++ + +Q + P V DAHP + A Sbjct: 424 DGQLQLAPYVGDLESLAARDRRQQVIEHLQTVMGLQPTAWVADAHPD--APLLAPTETRS 481 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HH AH A AEHQ + L DG G G + +WG E L + Sbjct: 482 GWHVQHHLAHVLAVAAEHQLQP---PFLGLAWDGSGWGLDQTVWGSEALICQTEGWQRWR 538 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIERGINA 588 L L GGD AAK+P R+ LA + + + E +V L +A Sbjct: 539 HLQLWPLLGGDRAAKEPRRSALALLWQLEGDRCWDLPELQTVFSPTERSLLQAWLSRDRG 598 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLA 648 SS GR F+A+A +YEG+ A LE +P+++ +D Sbjct: 599 LKTSSMGRLFEAIAWICRW-QGDQTYEGQVATWLENQCDPQIVGDYPLSLTETG--IDWR 655 Query: 649 TFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 + Q A FH +L Q AL ++ G+ ++ SGG NR L Sbjct: 656 SLLQAVWCDRQADLSTAILATRFHRSLIQLVVALAQQA----GLEPVILSGGCFQNRFLL 711 Query: 706 ARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 L A F + Q LP DGG++ GQ + A W G Sbjct: 712 EGAIAALRSAGFQPYWAQQLPPNDGGIAAGQVL--AVHWYGGSKH 754 >UniRef50_C4DDY6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDY6_9ACTO Length = 764 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 291/759 (38%), Positives = 382/759 (50%), Gaps = 30/759 (3%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 V++ + G VQGVGFRPFV++LA + L+G V N G V + R F+ +L Sbjct: 9 VRAVRVTVSGLVQGVGFRPFVYRLANEHRLNGHVANTGGQVAITARGPAAALAEFIARLS 68 Query: 63 QHCPPLARIDSVEREPFIWSQLPT-EFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 P + +++V + P F I S G PD ATC AC E+ P Sbjct: 69 TEAPVQSHVENVAVADLEPTPGPGAGFRIVNSARSGDPRRYPPPDLATCAACARELFDPD 128 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPFINCT CGPR +II +PYDR T M F +C C EY DP DRRFHA+P+A Sbjct: 129 DRRYRYPFINCTACGPRISIIDDLPYDRARTTMRTFHMCDRCRGEYLDPGDRRFHAEPIA 188 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 C +CGP L W EAAL AIA L+ G ++A+KG+GG+ L DA + AV LR Sbjct: 189 CADCGPRLTWW-GDGIGHGEAALSQAIAVLETGGLIAMKGVGGYQLVTDAGDDTAVRRLR 247 Query: 241 ARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDL 294 K+RP KPLAVM+ D L +LLT PAAPIV+ ++ L +AP L Sbjct: 248 HVKNRPGKPLAVMVGTLDRARRLADLDTDEAKLLTAPAAPIVVCHSPHLETLSSLVAPRL 307 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 + VGV LP +PL HLLL L PLV+TSGNL G+P I +E A L + DG L H+R Sbjct: 308 SHVGVFLPYSPLHHLLLAALDRPLVVTSGNLGGEPIIIGDEAARDRLGPMVDGVLGHDRP 367 Query: 355 IVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 I +R DDSVVR LRR+RGY P LP +L GA K+ + + Sbjct: 368 IRERHDDSVVRVVDGETLTLRRARGYAPSPSRLPIP--TDRTILAAGAQSKSALAVTGDD 425 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQ 471 + +L +LGDL + + + ++ P + HD H GY S+++AR+ L Sbjct: 426 RVILGPYLGDLDSAEAMDGYATGVDRLCGMHAVQPNLIAHDLHDGYASTRFARDSGLDRV 485 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 V HHHAH A AE I + DG+GMG++G LWGGE + +YR+ LG Sbjct: 486 GVQHHHAHVVATAAERGVD---EPFIGVAYDGLGMGDDGTLWGGEIMLADYRDFRRLGRF 542 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRF----VPEWQNYSETASVQQQNWSVLARAIERGIN 587 LPGG A + P R L ++ + + R IERG+N Sbjct: 543 GYAPLPGGAAAIRNPARMALGYRYGAEDLGGGTFRAPELEKRLGPAQTDTIRRMIERGVN 602 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS-CHGVTHPVTMPRVDN--Q 644 P ASS GR FDAVAA LG + SYEGEAA LEA P + R D Sbjct: 603 CPKASSAGRLFDAVAALLGITDTS-SYEGEAAVLLEAACEGVADAFPLPWRLARRDGIAV 661 Query: 645 LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 D + + A FH + + AL+R+ A T+ GGV NR L Sbjct: 662 YDPIPTLRAITETDEATSLTAARFHTTIVEVTVALVRDAARHGYPKTVCLGGGVFQNRRL 721 Query: 705 RARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + L FT+ + +P DGG++ GQ VIAAAR Sbjct: 722 VRGVREALGQEGFTVHISRDIPVNDGGIAYGQAVIAAAR 760 >UniRef50_B6BMW1 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMW1_9PROT Length = 733 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 253/770 (32%), Positives = 383/770 (49%), Gaps = 64/770 (8%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETF 57 M+ T+ +I G+VQGVGFRPF++++A +LN++G V N GV++ L + E F Sbjct: 1 MSYFTTKRFGFKIFGQVQGVGFRPFIYKIATELNINGFVKNSEKGVDLELEGEILQIEEF 60 Query: 58 LVQLY-QHCPPLARIDSVEREPFIWSQLPTEFTIRQST----GGTMNTQIVPDAATCPAC 112 + L PPLARID +++ F I ST G+ ++PD A C C Sbjct: 61 MNVLNSDRLPPLARIDKIQQIEIKPLYREQ-FEIIHSTLSVNNGSKVALVIPDTAICEEC 119 Query: 113 LAEMNTPGE-RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD 171 L + ++P + + Y Y CT+CGPR++II+ +PYDR T M+ F +C +C++EY +PL+ Sbjct: 120 LFDTDSPYKLKYYDYFATTCTNCGPRYSIIQTVPYDRENTSMSKFKMCTSCEEEYTNPLN 179 Query: 172 RRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDAR 231 RR+HAQP++C +CGP L ++ +K GKIVA+KG+GGFH+ CDA Sbjct: 180 RRYHAQPISCNDCGPTLT-----------DTIEKTAEFIKNGKIVAMKGLGGFHIVCDAT 228 Query: 232 NSNAVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVP- 284 N + LR K+RP KPLA+M + + ++LL + APIV+++K Sbjct: 229 NDEVIERLRVHKNRPTKPLAIMCKDLEQVKLLASASTKEQELLASKEAPIVILNKALDAK 288 Query: 285 -ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 ++ D +AP+++ +G LP L HLL ++L+ P+V TS NL +P I E L Sbjct: 289 IKISDKVAPNIDRIGCFLPYTALHHLLFKQLKNPIVATSANLGSEPIIIKAEDIKEKL-P 347 Query: 344 IADGFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGAD 400 D L +RDIV +DDS VV + +MLR SRG+ P + GFK+ +L +GA+ Sbjct: 348 FVDFVLDFDRDIVNGVDDSLVQVVNGNTQMLRLSRGFAPKVIK--LGFKSEKKILAVGAN 405 Query: 401 LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS 460 KN V + +LS H+GDL + + ++ YDF P +VHD HP Y ++ Sbjct: 406 AKNAIAFVIEDNIILSPHIGDLGSLKAFEFFERTIETFKSFYDFEPDVIVHDMHPNYETT 465 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 +WA+ V HH AH AC AE + GD + + DG G G +G LWGGE Sbjct: 466 KWAKAQGKELVEVQHHLAHIYACKAEFEL---SGDYLGFSFDGTGYGSDGQLWGGEIFVG 522 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWS 576 + R+ ++ L GG+ A K+P R L+ + + S ++ Sbjct: 523 DVRKY----SFKSLKLLGGEKAIKEPRRVALSMLFDKYSLDEVLSLDAEVVKSFKESEIK 578 Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636 +L ++ + +NAPL+SS GR FDA+A+ SYEGEA E VT + Sbjct: 579 ILHQSHTKNLNAPLSSSVGRLFDAMASFSNLLQF-QSYEGEAGLICEE--NYKQDVTQTL 635 Query: 637 TMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSG 696 VD +D+ + F + LAQ + + + ++ SG Sbjct: 636 EYKIVDGIIDIEFDFFD--------KNIVSKFINTLAQIVLDISKIEKME-----VILSG 682 Query: 697 GVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 GV N+ L A L AD + DGG++LGQ Sbjct: 683 GVFQNKTLLELAASKLKDADIKYFYQSETAINDGGIALGQAYFEVMNHKE 732 >UniRef50_B8J4U0 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4U0_DESDA Length = 978 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 307/905 (33%), Positives = 418/905 (46%), Gaps = 163/905 (18%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETF 57 M++ G+VQGVGFRPFV++LA + L G V N DGV + ++ + E F Sbjct: 72 MSEKQMIRRAFVASGQVQGVGFRPFVYRLAHEGGLTGTVGNTSDGVRMEVQGMPEEVERF 131 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEM 116 ++L + PPLAR+ ++ E F I S G + + PD C CL++M Sbjct: 132 GMRLQKELPPLARLTALRHEDMAAVPGEAAFAIVASDGHAGHSVLVSPDVGICADCLSDM 191 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P R+ Y F NCT+CGPR+TI R++PYDR T M+ FPLCP C EY DP DRRFHA Sbjct: 192 TDPENPRHNYAFTNCTNCGPRYTITRSIPYDRAVTSMSCFPLCPRCAAEYGDPADRRFHA 251 Query: 177 QPVACPECGPHLEWVS-------------------------------------------- 192 QP+ACP+CGP L +V Sbjct: 252 QPIACPDCGPRLWFVDRAAAVAGRTGVEHFRADCGLAGAEADSGPDVDNADAHDRADAAR 311 Query: 193 ----HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 G A++ A L G I+A KG+GGF LACDARN A+A LR RK+RP K Sbjct: 312 QRCLPGAETAAREAIRRAGRVLLDGGILAFKGLGGFQLACDARNERALALLRERKNRPHK 371 Query: 249 PLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKY-------------------- 282 PLA+M + L LLT+P PIVL + Sbjct: 372 PLALMADCLETVRAFCDLSPEHEALLTSPEKPIVLCPLRTGKARGPYATNGVDGLNGPAG 431 Query: 283 --------VPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC------PLVMTSGNLSGK 328 PEL +APD +VGVMLP PL +L LQ LVMTS N G+ Sbjct: 432 KADADTPGRPELPFLVAPDAGQVGVMLPNTPLHSVLFAWLQVHAPLPPVLVMTSANAGGE 491 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV----------------RESGEMLR 372 P + N +A+A L G+AD +L+H+RDI+ R+DDSV+ R + R Sbjct: 492 PICLGNREAIARLAGLADAWLLHDRDILVRVDDSVISLRPRADVVDESGPPHRAAPFFYR 551 Query: 373 RSRGYVPDAL-------------ALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 R+RGYVP + G + V GA+LK T CL RG +A + QH+ Sbjct: 552 RARGYVPRPVFLADDGEKAGGRQPCASGRSDAACVFGAGAELKATICLTRGNEAFVGQHI 611 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLH 475 GDL + + E M+ + + P +V D HP ++S+++A ++P + H Sbjct: 612 GDLENPATLAFYEEVAAHMEKLLEVRPSALVCDLHPDFLSTRYAEARAARDSIPLWRLQH 671 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR--VNYRECEHLGGLPA 533 H AHAA+ LAE+ G +AL LDG G+G++G +WGGE L ++ E + +G L A Sbjct: 672 HAAHAASVLAENAC---FGPALALCLDGTGLGDDGTIWGGELLLMQLDTPEWQRVGCLSA 728 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVP-------EWQNYSETASVQQQNWSVLARAIERGI 586 ALPGGD A ++PWR +A + + + + A + + R I Sbjct: 729 FALPGGDAAVREPWRIAMALGRQAADAGHCLPEDIEAAAPWADGHAAAARAVEEMLVRQI 788 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC----------------- 629 N P SSCGR FDAV+A LG ++YEG+AA LE A Sbjct: 789 NCPATSSCGRLFDAVSARLGLCL-CITYEGQAAIRLEDAALRAGGALGGAMTGRVEDLRR 847 Query: 630 -HGVTHPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQ 683 + PV M D LD A + + + P A FH +LA FA++ Sbjct: 848 VAELVWPVGMALRDGLLTLDSAGLYARVVQAALGGMPAEDIAARFHLSLAAAFASMTGRA 907 Query: 684 ATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 A RG+ SGGV+ N ++ L L +L LP GDGGLSLGQ V Sbjct: 908 ARKRGVGVAALSGGVMQNGIMARLLPFLLERQGLKVLCHHELPPGDGGLSLGQAVWGRRM 967 Query: 742 WLAGE 746 AG Sbjct: 968 LAAGT 972 >UniRef50_B1ZQ64 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQ64_OPITP Length = 788 Score = 856 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 297/763 (38%), Positives = 394/763 (51%), Gaps = 42/763 (5%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCPP 67 L I G VQG+GFRPFV +LA++L + G V N+ G +R+ P+ FL++L P Sbjct: 29 LEITGTVQGIGFRPFVARLAKELRIRGWVRNNPRGAALRIAGAPDRLDEFLLRLRAELPA 88 Query: 68 LARIDSVE------REPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 +IDS+E R F I S T + + PD A C CLAE+ +P Sbjct: 89 AGKIDSLEQPPAGVRADLPPCPA-AGFEIIASATTEPPTSAVTPDLAICADCLAELGSPR 147 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RR+ YPFINCTHCGPR+TI+RA+PYDRP T MA F +C C +EY DP +RR HAQP A Sbjct: 148 DRRHGYPFINCTHCGPRYTILRALPYDRPNTTMAEFVMCHDCAREYGDPRNRRHHAQPNA 207 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 C CGPH+ AE++ A+ AA A L G IVA+KGIGGFHL D N AVA Sbjct: 208 CSVCGPHVTLEDPPGKKLAERDEAIAAAAASLLHGNIVAVKGIGGFHLLADGTNETAVAE 267 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RKHR KPLAVM P + + + LT+ AAPIVLV ++ L IAP Sbjct: 268 LRRRKHREEKPLAVMFPSLAAVREMAELSEEEERQLTSAAAPIVLVRRRPGAALAVSIAP 327 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 VG LP PL LLL PLV TSGNL+ +P N +A L IAD FL HN Sbjct: 328 GNPCVGAFLPYTPLHKLLLDACARPLVATSGNLAEEPLCTGNVEARERLGRIADLFLTHN 387 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R I + +DDSV+R + +LRR+RG+ P L LP + PP+LC+G +LK+T + Sbjct: 388 RAIARPIDDSVIRVARDGPVLLRRARGFAPTPLPLPADCRCRPPLLCVGGELKSTIAVTT 447 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLP 469 VLS H+GDL + +R + L +++++ T + V DAHP Y S+ +A + LP Sbjct: 448 DTNLVLSPHIGDLESPLARAAFRHTIDLFRSLHELTFRAVGCDAHPDYASTIFAESLGLP 507 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY--RECEH 527 V HH AH ACL EH V+ + DG G G +G +WGGE + V+ Sbjct: 508 VVRVQHHLAHLLACLLEHG--GGPERVLGVAWDGTGYGSDGTIWGGEFIVVDRRAHTARR 565 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 +G L LPGG+ A + PWR L P+ T + ++ G + Sbjct: 566 VGHLRPFRLPGGEAAIRAPWRTALGLLHALSPDASTALNTLPNTP-EAQQVRALLDGGRH 624 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHG--VTHPVTMPRVDN-- 643 AP+ +S GR FD VAA LG +++EG+AA +EA+A P+ + + Sbjct: 625 APITTSAGRLFDGVAAMLGLRQQ-VTFEGQAAMDVEAIATDAEPNITGWPMPIGTSEQTG 683 Query: 644 --QLDLATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 +LD PV A FH LA G AAL GI +V SGG Sbjct: 684 RLELDWRPALAALTRELAHTPVPTLAARFHATLAAGIAALAERV----GIEDVVLSGGCF 739 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 N L L F +L + LP DGG++ GQ + A Sbjct: 740 QNVRLLELTTAALQAKGFRVLRHRMLPPNDGGIAAGQALGALW 782 >UniRef50_Q43950 Carbamoyltransferase hypF n=2 Tax=Gammaproteobacteria RepID=HYPF_AZOCH Length = 776 Score = 854 bits (2208), Expect = 0.0, Method: Composition-based stats. Identities = 307/772 (39%), Positives = 404/772 (52%), Gaps = 45/772 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G VCN G+GV + L+ P F Sbjct: 1 MNEAAKAGVRLLLRGRVQGVGMRPGVHRLATSLGLAGAVCNTGEGVRIDLQGPPAALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEM 116 +L PPLAR+D+++RE F I S P DAA CPACL E+ Sbjct: 61 ERRLPAELPPLARLDALQRENLPAGAHFAGFAIVPSRDEAGGALAPPPDAAVCPACLEEL 120 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C EY DP DRRFHA Sbjct: 121 FDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRAQTSLAGFALCPDCRHEYEDPADRRFHA 180 Query: 177 QPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 QP+ACP CGP L + ++ A+A L+ G+IVA++G+GGFHLACDARN+ AV Sbjct: 181 QPIACPACGPRLWCEDAAGNRLPGEPVELALATLRRGEIVALRGVGGFHLACDARNAGAV 240 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKY--VPELCD 288 A LR RK RPAKP A+M L + L+ PAAP+VL+ ++ L Sbjct: 241 ALLRRRKRRPAKPFALMAANPASLEALVELNETGLNELSAPAAPVVLLRRRPAADGLLAA 300 Query: 289 DIAPDLNEVGVMLPANPLQHLLL-QELQCP-------------LVMTSGNLSGKPPAISN 334 ++APDL +GVMLP +PL LL + P LVMTS NLSG+P N Sbjct: 301 EVAPDLAWLGVMLPHSPLHWLLFHEAAGRPAGTAWTAAPQDLVLVMTSANLSGEPLITGN 360 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNV 391 +A L GI D +L+H+R+I+ R+DDS+V G ++R RG P + L ++ Sbjct: 361 LEAREKLAGITDLWLLHDREILNRVDDSLVNALGRAPVVIRSGRGLAPQEIRLA---RSG 417 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P VL LG LKN CL +G++A LS H+GDL + + P+ + Sbjct: 418 PSVLALGGQLKNAICLTQGDRAWLSPHIGDLHSADACRSLERTVAQFGELLGVRPERIAC 477 Query: 452 DAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP + +S++ A LP V HHHAH AA LAEH V+ L LDG G+G Sbjct: 478 DLHPDFFASRFAREHAERHGLPLYPVQHHHAHIAAVLAEHGL---AEPVLGLALDGFGLG 534 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G L GGE L+V C LG L + LPGGD AA++PWR + T Sbjct: 535 ADGRLRGGELLKVAVDGCAWLGELNPLPLPGGDQAAREPWRMAAGALHALGRGGE--IAT 592 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 + + +AR +ERG N P +SS GR FDA A LG YE EAA LE+ Sbjct: 593 RFAAEPGSAAIARMLERGFNCPPSSSAGRLFDAAAGLLGLG-ERQRYEAEAALRLESRIG 651 Query: 628 SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 S P+ DN+LDL+ + + A FH L A + A Sbjct: 652 SLPEAVPPLWRIGDDNRLDLSPLLARLADTHDSR-VGAELFHAVLIAALTAWVVRAAAAT 710 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 G+ + GG N +LR L L A L P+ P DGGL+LGQ + Sbjct: 711 GLRRIALGGGCFLNTVLRDGLCTRLQAAGLEPLLPRRAPVNDGGLALGQAWV 762 >UniRef50_B3DXE2 [NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXE2_METI4 Length = 790 Score = 853 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 254/781 (32%), Positives = 364/781 (46%), Gaps = 47/781 (6%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETF 57 MA + ++++GKVQGVGFRP+V++LA+ +L G V N DGV + + E F Sbjct: 9 MADK--EAIHIQLKGKVQGVGFRPYVYRLARSYDLKGWVSNGTDGVHIHVEGQKEILERF 66 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIV-PDAATCPACLAEM 116 L + PPLA + + L F +++S ++ IV PD C +C E+ Sbjct: 67 YRDLLRDYPPLALLTESFCREAPFLGLE-GFIVKESIEEKEHSVIVLPDLDVCESCKEEL 125 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 RR+RYPFI CT CGPR++II ++PYDR T M FP+C C +EY +P DRRF++ Sbjct: 126 YCSSNRRFRYPFITCTECGPRYSIIYSLPYDRSKTTMNIFPMCKDCLEEYENPSDRRFYS 185 Query: 177 QPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 Q +C ECG + + A+ E A++ + G+IVA+KGIGG+ L DA N Sbjct: 186 QTNSCKECGIRVYLYGKQKEEIAQGEEAIKEGAWAIAEGQIVAVKGIGGYLLMADALNPA 245 Query: 235 AVATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLV-DKKYVPELC 287 A+ LR RK R +KP A+M + + + L + PI+++ KK + Sbjct: 246 AILKLRERKRRASKPFALMFNDIQEVEKEVYLSEKEKSWLISRQKPILILQRKKTQSPIA 305 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 D +AP + +G+MLP PL LLL L+ PLV TS N+SG P L + D Sbjct: 306 DLVAPAQDTLGIMLPYTPLHILLLDYLKRPLVATSANISGLPIVFEEGMLFLKLGHVFDK 365 Query: 348 FLIHNRDIVQRMDDSVVRES-----GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 L HNRDIV DDSV+R S LRRSR + P L L LGA+ K Sbjct: 366 VLTHNRDIVVPQDDSVIRVSFFFKQTIFLRRSRSFAP-FLNASLRVPKGECYLALGAEKK 424 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS-- 460 +T C LSQ+LGDL + +++ L N++ F PQ ++ D HP Y S Sbjct: 425 STVCFCHEGNIFLSQYLGDLDCFEAEENFKKTLSHFFNLWGFKPQKIILDLHPLYRSRLI 484 Query: 461 --QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 + E N+ HH AH A LAE + V+ + DG G GE+GA+WGGE Sbjct: 485 GEAMSEEKNIERIYFQHHKAHFWAILAEKKLLGLEEPVLGVIWDGTGYGEDGAVWGGEFF 544 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 E + L GD A ++P + L + +++ W Sbjct: 545 LYYKGRMERVNHFEYFPLLLGDKAVREPRISALGIFRKERKIVEDF-LKPKFNPWEWKTY 603 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV------ 632 ++R S GR FDA+A+ LG S+EGEAA AL+ LA+S Sbjct: 604 RALLDRK-KYWACCSVGRLFDALASLLGLCD-RASFEGEAAIALQRLASSSVQSLSDLEK 661 Query: 633 ------THPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATM 686 + R + +L ++ + + P + + FH + L+ + A Sbjct: 662 IPLRWFDEKAPLRRPISLENLLKSIEKSIVEEIPKEEISLGFHF----WLSKLIGKLAEN 717 Query: 687 RGITTLVFSGGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 G + FSGGV N LL L A F L F + D +S GQ I A G Sbjct: 718 TGARKIAFSGGVFQNSLLVDLLYLQWAGRFDLFFHDEISPNDENISFGQL-IGALYGKEG 776 Query: 746 E 746 Sbjct: 777 R 777 >UniRef50_A1T7M3 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Mycobacterium RepID=A1T7M3_MYCVP Length = 777 Score = 853 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 295/759 (38%), Positives = 398/759 (52%), Gaps = 42/759 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 V+L I G VQGVGFRP V ++A Q L G V ND V L + + L Sbjct: 2 RVRLTITGVVQGVGFRPAVARIAAQNRLAGFVLNDARAVRCELEGPGPRVDAAVRTLRDG 61 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIR---QSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 PPLA +DS + T F I S T + PD ATC CL E+ P + Sbjct: 62 PPPLACVDSF-VTEMRPALGETVFRILDSTPSGDNGDRTLVSPDIATCADCLRELFDPAD 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+R+PFI CT+CGPR+T+I +PYDRP T MA F +CP+C EY DP DRR+HAQ +AC Sbjct: 121 RRHRHPFITCTNCGPRYTVITDVPYDRPTTTMAGFAMCPSCAAEYGDPADRRYHAQTIAC 180 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 PECGP L W G H A+++A A L+ G IVA+KG+GG+HLAC A + +AVA LR Sbjct: 181 PECGPTLSWHGPGPHG---GAVESAAAALRAGLIVAVKGVGGYHLACRADDDDAVARLRR 237 Query: 242 RKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK+RPAKP AVM + + DAA + LT+ AAPIVL+ + + +AP+L Sbjct: 238 RKNRPAKPFAVMAADIEAARRICHVDDAAARSLTSAAAPIVLLPAR-AGAVSVHVAPNLT 296 Query: 296 EVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 ++GVML +P+ HLL E P LVMTS N G P + L + G+AD L H+R Sbjct: 297 DLGVMLAYSPVHHLLFAEPDMPALVMTSANQGGSPIVFRDGD-LDWIDGLADAVLTHDRP 355 Query: 355 IVQRMDDSVV----RESGEMLRRSRGYVPDALALPPGFKNVPP-------VLCLGADLKN 403 I +DSVV + LRRSRGY P +++ G + +L G D+K Sbjct: 356 IHVPCEDSVVSIDDDGNEVPLRRSRGYAPLPVSVGAGAGDGDGDGDDPAVILATGGDIKT 415 Query: 404 TFCLV-RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 TF L R +A LS HLGD++D Q + A+ + + P + HD HP Y +++W Sbjct: 416 TFALTGRYGRAHLSSHLGDMADPRTQACFAAAVDHLGFLTGSAPTVLAHDLHPQYATTRW 475 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV-N 521 A+ V HHHAHA + LAEH+ G +IA+T DG G G +G +WGGE L V + Sbjct: 476 AQRRGERLLAVQHHHAHAVSLLAEHR--RLGEPIIAVTYDGTGFGTDGTIWGGELLAVRD 533 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLAR 580 +G L ALPGG+ A +QP R L R E + A++ +L + Sbjct: 534 PARFTRVGHLAPFALPGGEGAVRQPARIALDLLDRAGIEASDDLPPVAALGAAGLHILTQ 593 Query: 581 AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR 640 + RG+ +S GR FDAV++ LG + YEG+AA LE A V Sbjct: 594 QLRRGVGCVPTTSMGRLFDAVSSLLGVCQQ-VGYEGQAAIELEHRA-RAGRPWRAVDFEV 651 Query: 641 VDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGG 697 LD A ++ P A AFHDA+ + + A G++T+ +GG Sbjct: 652 TAGVLDPAPVITALVDGVRRGVPSADLAMAFHDAVVRATVRAAGDAAVAAGVSTIGLTGG 711 Query: 698 VIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 V NR L A +AH L +L + +P DGGL+LGQ Sbjct: 712 VFANRRLLAGIAHGLRVRGLEVLTHRVVPCNDGGLALGQ 750 >UniRef50_Q8TXL4 Hydrogenase maturation factor n=1 Tax=Methanopyrus kandleri RepID=Q8TXL4_METKA Length = 762 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 289/773 (37%), Positives = 388/773 (50%), Gaps = 48/773 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 ++R+RG VQGVGFRPFV++L ++ L G V N G VE+ ++ + E + +L Sbjct: 1 MRTWKIRVRGIVQGVGFRPFVYRLCTEMELDGHVRNLGSEVEIVVKATCDELEELIRRLK 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGE 121 + PPLAR+ V E P F I +S QI PDA C CL E+ P Sbjct: 61 EEHPPLARVREVHAEETEEDVGP-GFRIVESEESEDVELQIPPDAPVCEECLEEIFDPKS 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPF CT+CGPRFTII +PYDR T M FPLC C +E+ DP DRR+HAQ V C Sbjct: 120 RRYLYPFTGCTNCGPRFTIIEGIPYDRENTTMVDFPLCEECRREFEDPEDRRYHAQVVCC 179 Query: 182 PECGPHLEWVSHG---EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 P CGP + E+ A++ A ++ GKIVAIKGIGGFHLAC VA Sbjct: 180 PRCGPRYRLLDADGEVVEGEELEAIREACELIEEGKIVAIKGIGGFHLACKTTEDEPVAK 239 Query: 239 LRARKHRPAKPLAVMLPVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR R RP +P AVM D + A LLT P PIV++ KK L + +AP Sbjct: 240 LRERLGRPQQPFAVMSGSLDDVRTFAEVDGTAEDLLTGPVRPIVVLPKKEPFPLSELVAP 299 Query: 293 DLNEVGVMLPANPLQHLLLQEL-QCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 L+ VGVMLP L H++ + P +VMTS N G+P AI N AL L+GIAD +L+ Sbjct: 300 GLHTVGVMLPYTGLHHIMFERFLDEPAIVMTSANPPGEPMAIRNSDALRHLRGIADYYLV 359 Query: 351 HNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I R DDSVVR LRRSRGYVP+ + L ++ V+ +G +L T C+ Sbjct: 360 HDRRIAARCDDSVVRVLDGRPRSLRRSRGYVPEPIELEWAPDDL-TVVAVGPELDVTACV 418 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF---TPQYVVHDAHPGYVSS---- 460 + +A +QH+G+ S +E + + V D HP + ++ Sbjct: 419 LHRGKAYPTQHIGNTSRAQTLDFLQETVERFLRLLRLDWNDVDAVACDLHPSFATTGLAR 478 Query: 461 QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV 520 +WA E +L V HHHAHA ACLAEH IA +DG G G++G+ WGGE L V Sbjct: 479 RWAEEHDLELVRVQHHHAHALACLAEHGLDPAEEPAIAAAMDGYGYGDDGSAWGGEILYV 538 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET-----------AS 569 + E E +G L V++PGGD A +P R A + E Sbjct: 539 DGNEYERIGHLEPVSMPGGDAATYRPLRMTAAHLHAAGWSEEEIREFLLRRLEEWPHALK 598 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 ++ V+ IE +S GRF DAV+AALG +YEGE A LEA+A Sbjct: 599 HGEREVEVILHQIEH--PTIETTSAGRFLDAVSAALGVCHER-TYEGEPAMKLEAVAVRV 655 Query: 630 HGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 P + + + +++ + + A H AL +GFA ++ E Sbjct: 656 DHAPEP-DVDVRNGSVRVSSVVARAAETGDL--RYALTAHHALIEGFAEVIDEHRDG--- 709 Query: 690 TTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 + +GGV +N L+ L LL +PAGDGG+SLGQ V A Sbjct: 710 EPVAITGGVFNNELITRG-FRELYGADLLEHHEVPAGDGGVSLGQVVAAVLEL 761 >UniRef50_A4YF85 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YF85_METS5 Length = 743 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 253/756 (33%), Positives = 385/756 (50%), Gaps = 37/756 (4%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPET---FLVQL 61 ++ G VQGVGFRPFV++ A + + G V N VE+ ++ ++ F Sbjct: 1 MKSFRITASGIVQGVGFRPFVFRTALKSGVSGFVRNLSGSEVEIVIQGSQDSISKFFSLF 60 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPG 120 + + PP +R++ + P L F I +S +QI PD + C C+ E+ PG Sbjct: 61 FLNLPPQSRLEQITITPLEGDIL-QGFKILKSEKMRYEASQIPPDFSVCSECIREVLDPG 119 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPV 179 RRYRYPF +C +CGPRF+++R +PYDR T M FPLC C +EY DP + RRF AQ + Sbjct: 120 NRRYRYPFNSCVNCGPRFSMMRKVPYDRENTAMVEFPLCDECAQEYNDPDNERRFDAQGI 179 Query: 180 ACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 +CP+CGP L + + ++ A L GKI+AIKGIGGFH+ACD + + V TL Sbjct: 180 SCPKCGPRLYIEDMRGNRLEGDPIKLAGKLLTEGKIIAIKGIGGFHIACDPFDDDVVLTL 239 Query: 240 RARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 RARK RP+KP AVM + + + +L +P PIVL+ K+ + ++P Sbjct: 240 RARKGRPSKPFAVMSISSDIISNFAEINPLEKDILESPERPIVLLKKREDSPISKHVSPG 299 Query: 294 LNEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ G L PL ++LL E+ LVMTS N G P + L GI D L H+ Sbjct: 300 LDREGFFLYYTPLHYMLLSEVKGNTLVMTSANRHGYPMCTTESCVKEKLSGIVDYMLYHD 359 Query: 353 RDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+IV R+DDSV++ +G +LRR RGY P + + FK P + LGA+L+N L+ Sbjct: 360 REIVNRVDDSVIKFAGNRLHILRRGRGYAPLWIRMKSKFKT--PAIALGAELQNAGALMF 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWARE 465 ++ +L+Q++GD + + L + + YD P+ ++ D +PGY + + + + Sbjct: 418 DDKVILTQYVGDTDKLENLQEMEKMLNFLMSTYDVRPRVILVDKNPGYQTRYVANRLSEK 477 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + V HH AHA + A+H + +A+ +DG+G G++G WGGE L E Sbjct: 478 FSAEIVEVQHHFAHALSVAADHG----SDEGVAIAIDGVGYGDDGNAWGGEILLFTGSEY 533 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 E L V PGGD+ A +P R LA L V + + A + + +L ++ Sbjct: 534 ERSYHLKYVPYPGGDVNALRPRRM-LAIFLSQVMTLEEAGKIAGLNENEVIMLRSSLRG- 591 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 N SS GRF DAV+A LG +YEGE A LEA A++ + +P V N++ Sbjct: 592 -NRIYTSSTGRFLDAVSAFLGVCDRR-TYEGEPAIRLEASASNGK--LLDLDIPVVGNEI 647 Query: 646 DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLR 705 D ++ ++ + VN A L + A + ++ SGG N + Sbjct: 648 DTLKAFEWLISEEGKVNDIALTVQYRLGEALAKAALKL----NPQVILVSGGAAVNEYIL 703 Query: 706 ARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L ++ P+ +P+ DGG++LGQ R Sbjct: 704 RGLRENSEGIEVITPRRVPSNDGGIALGQAHYLLQR 739 >UniRef50_B0TWC6 Hydrogenase maturation protein HypF n=2 Tax=Francisella philomiragia RepID=B0TWC6_FRAP2 Length = 751 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 255/769 (33%), Positives = 386/769 (50%), Gaps = 56/769 (7%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCP 66 ++ + G VQGVGFRPF++ LA+ +NL G V N +GVE+ L+ D ++F+ + P Sbjct: 7 KILVNGIVQGVGFRPFIYCLAKDMNLCGSVQNTPNGVEILLQCDESTVDSFINDMEAKLP 66 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA I+++++ + T+F+I ++ G+ T+I D A C CL ++ P R Y Y Sbjct: 67 PLASIETIQKTIYQTESEFTDFSILETQQGSSATKIPADTAICDLCLDDIFNPQSRYYLY 126 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P+ +CTHCGPRF+ I+ +PYDR T FPLC C Y +PLDR +HAQ VAC CGP Sbjct: 127 PYTSCTHCGPRFSTIQNLPYDRDKTTYKDFPLCDGCHDSYTNPLDRHYHAQTVACSSCGP 186 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + ++ GKI+AIK GF L DA N+ AV LR RKHRP Sbjct: 187 KLS-----------HSFAEISQAIRAGKIIAIKSQNGFKLVVDATNTEAVEKLRRRKHRP 235 Query: 247 AKPLAVMLPVADGLPD-------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 KP A+M + + +LL T PIVL+ + + IAP +N++G Sbjct: 236 NKPFALMALNTQSIQEHFAEVTTQQDELLNTTIRPIVLLKRHSTSTISSSIAPHINQLGF 295 Query: 300 MLPANPLQHLLL--------------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 MLP ++L + L++TS N+SG+ +N++A L+ IA Sbjct: 296 MLPTTGSDYILFYHLLNQPNSSSWLNEAYNLALIVTSANISGESIIANNDEAHEKLKDIA 355 Query: 346 DGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D + NRDI + DDSV V + +RRSRG VP ++ + +P +L G LK Sbjct: 356 DLIVTDNRDIAIKSDDSVFHTVIDKNLPIRRSRGLVPQSI---QLSETLPNILATGTFLK 412 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTFC ++ QA +SQH+GD++ + ++L Q ++ + D HP ++ + Sbjct: 413 NTFCFIKDNQAFVSQHIGDMNSQANIEFFEQSLEHFQKMFGLKFDGIACDLHPDIYTTYF 472 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522 A++ +LP + HH AH AA + EH G I L LDG G+GE+G GGE + Sbjct: 473 AQKFDLPIYQIQHHQAHLAAVITEHNLQ---GHAIGLVLDGFGLGEDGIARGGELYHCDI 529 Query: 523 R--ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLAR 580 E +G L + GGD AK+PWR LA C ++ E N+ + + +L Sbjct: 530 DNLEFNRIGELDPIEYIGGDKVAKEPWRMALAVCHKYDLEIPNHLKEFPQAESLIKLLQN 589 Query: 581 -AIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 ++ +G +S GR FDAV++ L +YE +AA LE+LA + + Sbjct: 590 DSLPKG----KTTSMGRLFDAVSSLLNVCHIN-TYEAQAAIELESLAD-ISNIQYDTKSV 643 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 L+L + + ++ + +H LA A + A R I ++ SGG Sbjct: 644 SFKTNLNLKKLLKSIIKC-DNISVASNLWHSTLAYALAQWISNSAQPRNIKNIILSGGCF 702 Query: 700 HNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGE 746 N+LL L DF + + +P DGG+SLGQ + A ++ GE Sbjct: 703 QNKLLLTETYRQLKEMDFNIYISEKVPLNDGGVSLGQAWLGAKKYKKGE 751 >UniRef50_C8WJD2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJD2_EGGLE Length = 920 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 289/921 (31%), Positives = 390/921 (42%), Gaps = 189/921 (20%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 + ++++G VQGVGFRPFV++LA++ + G V N DGV + + + F+++L Sbjct: 2 KEALDIQVKGIVQGVGFRPFVYRLAKKYLIDGWVLNATDGVFIHAEGETKLLDEFVIELS 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG--TMNTQIVPDAATCPACLAEMNTPG 120 ++ P +R++ V + + F IR S G T + PD ATC C E+ P Sbjct: 62 ENPPAASRVEEVTLKEVPL-EDFDSFEIRFSDAGAVEKTTLVSPDLATCDDCARELFNPN 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF------ 174 +RRYRYPFINCT+CGPRFTII +PYDR T M FP+C C +EY DPLDRRF Sbjct: 121 DRRYRYPFINCTNCGPRFTIIEKLPYDRKSTSMKDFPMCERCAREYGDPLDRRFHAQPDA 180 Query: 175 -----------------------HAQPVA----------------------------CPE 183 HA V+ C Sbjct: 181 CFECGPHISWREHEGMPGALAGVHAPGVSADVPAAPDVPAGASASHAAQTNVSRETLCAS 240 Query: 184 ------CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 GP E +A L A+ L GKI+A+KG+GGFHL CDA N AVA Sbjct: 241 DAIDAPLGPIAW---GTTREESDAILARAVELLLAGKILAVKGLGGFHLVCDASNPEAVA 297 Query: 238 TLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LRARK R K AVM+ + + +A +LT PIVL+ K+ +A Sbjct: 298 LLRARKRREGKAFAVMMADMEAVRAYCEAGEAEEGILTATQRPIVLLRKRPDAVFAPGLA 357 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCP-----------------------LVMTSGNLSGK 328 L E+GVMLP PLQHLLL + LVMTSGN+ + Sbjct: 358 DALPELGVMLPYTPLQHLLLHDFAKASGCAERSSQREAEGSRAATAVPMLVMTSGNIHDE 417 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE--------SGEMLRRSRGYVPD 380 P I +E A L +AD FL H+R I R DDSVVR + + +RR+RGY P Sbjct: 418 PIVIDDEDAYEKLFAVADAFLGHDRAIRARYDDSVVRVIEAGSAGEAVQFIRRARGYAPL 477 Query: 381 ALALPPGFKNVP-------------PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGI 427 LA+P + + G + KNTF L R +A +SQH+GDL + Sbjct: 478 PLAMPAKAREGEDVSRETSVREQGCSIFATGPEQKNTFALTRDAEAFVSQHIGDLENAET 537 Query: 428 QMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEH 487 W +A + +++ P + D HP Y++S+WA E +LP V HHHAH + +AEH Sbjct: 538 YDAWLQAKDRYETLFEIEPDRIACDLHPEYLTSKWAHEQSLPVTEVQHHHAHVVSVMAEH 597 Query: 488 QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPW 547 G V + DG G G +GA+WGGE L N E V +PGG A K P Sbjct: 598 GL---AGPVCGIAFDGTGYGMDGAIWGGEVLLTNLTAFERFANFAYVPMPGGAAAVKHPL 654 Query: 548 RNLLAQCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG 606 R F + + + + +V + I+RGIN P+ SS GR FDA +A LG Sbjct: 655 RMAYGVLWAFDLLDHPGAAAALEALGEQAAVCDQMIDRGINTPMTSSVGRLFDAASALLG 714 Query: 607 CAPATLSYEGEAACALEALAASCHGVTHP------VTMPRVDNQLDLATFWQQWLNWQA- 659 +YEGE A LEA P N+ + Sbjct: 715 ICAE-PAYEGEPAILLEAAIGRTDVSRETSAADATDATPADTNRDPSTPALRASAQNDDA 773 Query: 660 ----PVNQRAWAFHDALAQGFAALMREQ-------------------------------- 683 + A + A+ + A Sbjct: 774 GLSASAREAASRYAIAVVKNTATAASTAQDTSVVLFDAAPAFAALLDDLAADVPVGIIAR 833 Query: 684 -----------------ATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLP 724 ++ GITTL SGGV NR L L A FT+ + LP Sbjct: 834 CFHDAFVQAIVTAAELVRSLYGITTLALSGGVFMNRYLLEHALAALEQAGFTVAVNRDLP 893 Query: 725 AGDGGLSLGQGVIAAARWLAG 745 DG +S GQ V+A A Sbjct: 894 PNDGCISFGQAVVAWASSKEE 914 >UniRef50_C3XM42 Hydrogenase maturation protein HypF n=3 Tax=Helicobacter RepID=C3XM42_9HELI Length = 778 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 242/776 (31%), Positives = 358/776 (46%), Gaps = 68/776 (8%) Query: 13 IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLA 69 + G VQGVGFRPFV+++A++ + G V N GV + + E F L P +A Sbjct: 11 LEGVVQGVGFRPFVYKIAKKCGIVGYVRNTTSGVTILAQGTNEALECFEKALQT-PPKVA 69 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTM-NTQIVPDAATCPACLAEMNTPGERRYRYPF 128 +I + + ++ +F I QST + N + D A C CL EM P RR+ YPF Sbjct: 70 KITKITKTESKKTESFLDFKILQSTQESALNAVVPADIALCKECLEEMWNPKNRRFHYPF 129 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 I+CT+CG R+++I A+PYDR T MA F +C C +EY +P RRFH++ C +CGP L Sbjct: 130 ISCTNCGGRYSLIHALPYDRKSTAMAQFRMCKECLEEYENPDSRRFHSEINCCEKCGPKL 189 Query: 189 EWVSHGE-------------------HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACD 229 + + + L A+ LK GKI+A+KGIGG+ L C+ Sbjct: 190 FFTGNLGFFKELEISQSDFALCQKFIKEFTQNPLDKAVEFLKQGKILAVKGIGGYALVCN 249 Query: 230 ARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYV 283 N+ A+ LR RK+RP KP A+M L +++L + API+L D K Sbjct: 250 GLNTEAIMVLRMRKNRPRKPFALMCKDLKMAESYVHLSAFQKEILDSNIAPILLCDFKDK 309 Query: 284 PELCDDI-APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ 342 L + AP+L +GV+LP PL +LL + + PL+ TS NLSG+P + +L Sbjct: 310 SPLPHSVIAPNLETLGVILPYAPLHYLLFEAIDFPLIFTSANLSGEPIIKDFSGIVENLG 369 Query: 343 GIADGFLIHNRDIVQRMDDSVVR-------ESGEMLRRSRGYVPDALALPPGFKNVPPVL 395 + DG L+++R+I+ +DDS+VR E ++LRR+RG++ L FK+ L Sbjct: 370 DVCDGVLLYDREILNPIDDSLVRTILYNGKEQMQVLRRARGFLC---DLNLPFKSKQDFL 426 Query: 396 CLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHP 455 LGA K TFCL ++ +LS HLGDL + +L Y + V D HP Sbjct: 427 ALGAQQKATFCLKTQDRVLLSPHLGDLDSVASVENFLNTQKLFIERYQSALKDFVLDLHP 486 Query: 456 GYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGG 515 Y ++ N Q V HH AH + + E++ V+ + DG G GENG +WGG Sbjct: 487 NYTQREFIEGSN-KAQRVQHHFAHLLSNITENEI---NEPVLGVIFDGTGYGENGKIWGG 542 Query: 516 ECLRVNYR---ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE---WQNYSETAS 569 E L N + E + + L GG+ A K+ R L+ E + Sbjct: 543 EFLSWNPKMPLEFKRVAHFDDFTLLGGEKAIKEIKRLGLSLVFESFKEGHKELDLPLFRE 602 Query: 570 VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC 629 +++ + E L +S GR FD V+A G SYEGE LE+LA Sbjct: 603 FSKEHLEIFYNLKESA--KVLCNSAGRLFDGVSALCGVCLQ-ASYEGEGGMVLESLALKA 659 Query: 630 HGVTH-----PVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMR 681 + + ++ + L + A FH LA A + Sbjct: 660 FKKLESQNLGAYSYEIKEGVINYQPMIRGICKELELGVEACEIALRFHITLASVIAKVAE 719 Query: 682 EQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI 737 + + SGG N LL L + + +P DGG+S+GQ Sbjct: 720 DYPC------VALSGGCFQNALLTQLTLEKLKGKKVYLNKKIPCNDGGISIGQAYF 769 >UniRef50_Q2Y8F5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Proteobacteria RepID=Q2Y8F5_NITMU Length = 770 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 287/759 (37%), Positives = 382/759 (50%), Gaps = 41/759 (5%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 + I G+VQGVGFRPFV++LAQ+ L G V N V + + F V L Sbjct: 13 KPEARRWLIGGRVQGVGFRPFVYRLAQRFRLTGHVQNTSGQVVIEAAGKKKLLDVFGVAL 72 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPG 120 PPLA+ + V E + + F I QS + I PD C C EM TPG Sbjct: 73 LAEAPPLAQPEMVHVEKIPYLER-DGFEILQSSDNSSGRIHIPPDYFLCDDCKREMQTPG 131 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RRYRYPFINCT CGPR+T+I +PYDRP TVM +F LC C +EY DP DRRFHA+PVA Sbjct: 132 DRRYRYPFINCTQCGPRYTLITKLPYDRPNTVMTSFELCSQCLREYEDPGDRRFHAEPVA 191 Query: 181 CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLR 240 CP CGP L + AAL A++ L+ G+IVA+KGIGG+HL CDARN A+ LR Sbjct: 192 CPTCGPQLCLSAPEGRINGPAALTASVTALRRGEIVAVKGIGGYHLMCDARNETAIGQLR 251 Query: 241 ARKHRPAKPLAVM-----------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDD 289 KHRP KPLA+M + + + LL PA PIVL+ ++ L Sbjct: 252 TNKHRPHKPLALMFPWCGDDGLAQVRDELEIDAQGQALLRAPARPIVLLRRRRDSMLPRS 311 Query: 290 IAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFL 349 I P + E+GVMLP +PL HLLL EL P+V TSGN+SG+P +N +A L + FL Sbjct: 312 ITPGIREIGVMLPYSPLHHLLLHELDKPVVATSGNVSGEPVLTANAEAETRLARVTRVFL 371 Query: 350 IHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 HNR I + DD VVR ++R RG P LP F V P+L +G +KN+ Sbjct: 372 HHNRPIARPADDPVVRVIAGKPRLVRVGRGVGPVEFDLPGLF--VQPLLAVGGHMKNSIA 429 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 L +A+LS H+GDL + + + +Q +Y PQ +V DAH GY SS+WA Sbjct: 430 LGWNGRAILSPHIGDLDAPRSMAVFEQVISDLQRLYGAFPQAIVCDAHKGYASSRWADRQ 489 Query: 467 NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECE 526 LP V H A A + T DG+G+GE+ LWGGE L Sbjct: 490 GLPLIPVW---HHHAHASALAAEHSRELTWLTFTWDGVGLGEDNTLWGGEALLGRPGVWR 546 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 + L LPGG+ A ++PWR+ A C E +L +A ++G+ Sbjct: 547 RVARLCPFRLPGGERAGREPWRSAAALCWESGIEPPAMGI-------RLELLKKAWKKGL 599 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH----PVTMPRVD 642 N+ + ++ GR FD A+ LG SYEG+A LE +A +C + + + + Sbjct: 600 NSRVTTAGGRLFDGAASLLGLLRH-ASYEGQAGMYLENIADACDSESEVDVIDLPLFQSA 658 Query: 643 NQL---DLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 L D LN PV +RA FH +LA + + +GGV Sbjct: 659 TGLLTADWKPLLPALLNEAIPVARRAMQFHLSLANSIMVQAQRIHASTPFDRVGLTGGVF 718 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 N+LL L A F P+ P DGG++LGQ V Sbjct: 719 QNKLLAELAVSQLTAAGFEAYLPERTPCNDGGIALGQLV 757 >UniRef50_UPI0001C4206D hydrogenase maturation factor HypF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C4206D Length = 815 Score = 846 bits (2188), Expect = 0.0, Method: Composition-based stats. Identities = 266/815 (32%), Positives = 405/815 (49%), Gaps = 77/815 (9%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 +++ + G VQGVGFRPFV+++A +L L G V N G+ VE+ L+ F+ +L Sbjct: 1 MESIKVLVEGIVQGVGFRPFVYRIATELELVGYVRNLGNVVEIILQGTDNQLADFIYKLQ 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGE 121 PP+A+I+++ E T+FTI++S+ + + I PD A C CL E+N P Sbjct: 61 NELPPIAKINNLRTEDIEIDSPYTDFTIKESSDSFSGTSVIPPDLAICDKCLEEINDPQN 120 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY+YPF CT CGPRFT+I +PYDR T M FPLC C+ EY++PLDRR+HA+ C Sbjct: 121 RRYKYPFNACTDCGPRFTVIENVPYDRDKTTMDDFPLCDECEIEYKNPLDRRYHAEASCC 180 Query: 182 PECGPHLEWVSHGEHA---------------------EQEAALQAAIAQLKMGKIVAIKG 220 CGP L+ + + E L+ L GKI AIKG Sbjct: 181 EVCGPSLKLMKNETEEGISTDKEGNEIKAMKRTAIDTESNDPLKDTARLLDEGKIFAIKG 240 Query: 221 IGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAP 274 IGG HL + ++ AV+TLR R R + AVM P + + D + L + P Sbjct: 241 IGGTHLVANVKDEKAVSTLRERLGRKNQAFAVMSPDIETVRTFAIVSDEEEKTLLSKERP 300 Query: 275 IVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAIS 333 IV++ K + + ++P L+ +GVMLP PL HLL E P +MTS N+ G+P I+ Sbjct: 301 IVILKKSKDYDFAESVSPRLHNIGVMLPYAPLHHLLFNETDSPAYIMTSANVPGEPMMIT 360 Query: 334 NEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKN 390 NE+ L +L IAD +LIHNR I+ R DDSV R +RRSRGY P+ L + + Sbjct: 361 NEEILQNLDEIADYYLIHNRRILNRCDDSVARFRNNELAFIRRSRGYTPEPYDLKGKYTD 420 Query: 391 VPP------VLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF 444 + P +L LG +L TF +++ +A +SQH+G+ + +EA++ M I Sbjct: 421 INPDFDNLNILALGPELDVTFTILKNSKAYVSQHIGNTNKYRTYEFLQEAIKHMMRITKT 480 Query: 445 -TPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIAL 499 + + D HP + +++ +A + + P V HHHAH + L +H D ++I + Sbjct: 481 DSFDAIACDLHPQFFTTRLAKEYAEKYDCPLIPVQHHHAHGISLLNDHYDDNDLNEMIII 540 Query: 500 TLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVP 559 DG+G G +G WGGE L + + E + L +PGGDL K P R + + Sbjct: 541 AADGVGYGADGNSWGGEILYTDIKGFERMASLMPQKMPGGDLCTKYPARMMASILSNPES 600 Query: 560 EWQ---------------NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAA 604 +++ NY ++ L R +E +N + +S GR D+V+ A Sbjct: 601 DYENEKYTKEYIEELLNNNYLDSFKHGSVEIKSLFRQMETNLNVGINTSTGRVLDSVSTA 660 Query: 605 LGCAPATLSYEGEAACALEALAASCHGV----THPVTMPRVDNQ------LDLATFWQQW 654 L SYEGEA+ LE+ A G P+ + +++ LD + Sbjct: 661 LHICDER-SYEGEASMKLESYAFEYKGEGSLDDFPIIVKEYEDENGKRLILDTTAILRYI 719 Query: 655 ---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 + +++ A A A++ G A L E A +GITT+ +GGV +N + + Y Sbjct: 720 IDKIEEGEDLHKIAAAGQKAVSIGLAKLAIESAKEKGITTIGATGGVFYNEAITDYIKTY 779 Query: 712 L--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 + F + + GDG +SLGQ ++A Sbjct: 780 IEKEGFDFIQHINSCPGDGSVSLGQAIVAGTNLNN 814 >UniRef50_C5CEU5 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU5_KOSOT Length = 747 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 252/758 (33%), Positives = 378/758 (49%), Gaps = 53/758 (6%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHC 65 ++ I G VQGVGFRPFV LA+ L LHG V N GV + L D F+ L + Sbjct: 7 FEIMINGIVQGVGFRPFVATLAEDLGLHGYVENCESGVRIVLDCDETKLREFIEILNERK 66 Query: 66 PPLARIDSVE-REPFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERR 123 P A+I + + + + F I S G +NT I PD A C C+ EM + G RR Sbjct: 67 PMPAKIRELSFSKKAVKTNKIRGFRIINSKKTGKINTSIPPDIAMCDKCIGEMFSKGNRR 126 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPF NC CGPRF+I +PYDR T M F +C C+ EY + D R+HAQ C + Sbjct: 127 YLYPFTNCARCGPRFSIAYVLPYDRDKTSMDDFSMCHDCNTEYTNLRDWRYHAQTNCCED 186 Query: 184 CGPHLEWVSHGEHA-----EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CGP V ++ E A++ AI ++ G VAIKGIGG HL C + +A+ Sbjct: 187 CGPKYWIVEIIKNEIVSHFSGEEAVKQAIGIIRAGGTVAIKGIGGIHLVCKP-DPDAIKK 245 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR K RP KP A+M + + + +LL +PA PIVL+ K+ + D++P Sbjct: 246 LRNLKDRPRKPFAIMAKDLETVKKFAYVGEVEERLLLSPARPIVLLRKRGD--IFYDVSP 303 Query: 293 DLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 + +GVMLP + +LLL++ LVMTSGN+SG+ N +AL L ++DG L+H+ Sbjct: 304 GFHTIGVMLPYTGIHYLLLEDF-FVLVMTSGNISGEMLCADNFEALTKLSKLSDGLLLHD 362 Query: 353 RDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R IV R DDSV++ +R+SRG++P+ + +P + P +L GADLK++F R Sbjct: 363 RKIVNRCDDSVIKVLAGKPVFVRKSRGFIPEVIKIPLRNRKHPEILATGADLKSSFGFFR 422 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWARE 465 E SQ+LGDLS Q+Q+++ L+ + ++D + VV D HP Y S ++A Sbjct: 423 EESFYGSQYLGDLSYYINQVQYQKMLKRFEKLFDLHARVVVTDLHPDYFSKTLGEEYAEN 482 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 + + HH AH + +AE I + DG G G +G +WGGE ++ +C Sbjct: 483 RDCEIYSCQHHVAHIYSVMAEKALK----KCIGVAFDGTGYGFDGKIWGGEFFSIDNSKC 538 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 L + +P G+LA ++P A + + ++ + +L Sbjct: 539 MRFAHLRYIPMPSGELAIEKPELMAYAYLIDSGVDLKD---------EKAHLLYE----- 584 Query: 586 INAP-LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGVTHPVTMPRVDN 643 NAP SS GR FDA AA L ++EGEA LE++A + + + Sbjct: 585 -NAPVKTSSAGRLFDAAAAVLDVCKEN-TFEGEAPMKLESVAKRHSESFSWVLDKSALPW 642 Query: 644 QLDLATFWQQWLNWQA--PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 Q+D ++ + + +++ A FH LA+ + + E + G + SGGV N Sbjct: 643 QIDFRKMIRELYSEKDKNSISELASKFHRTLAEAISVVCGEIKKLTGEKNVCLSGGVFQN 702 Query: 702 RLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVI 737 +LL L F + F + + D G++ GQ Sbjct: 703 KLLLEVAVALLEKKGFNVWFNEKVSPNDEGIAFGQIYW 740 >UniRef50_A5EUI8 Carbamoyltransferase hypF n=3 Tax=Proteobacteria RepID=A5EUI8_BRASB Length = 755 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 282/757 (37%), Positives = 390/757 (51%), Gaps = 34/757 (4%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQL 61 G + + G+VQGVGFRPFV +LA+QL L G V N V++ +R D + F + L Sbjct: 9 ALEGRSIEVVGRVQGVGFRPFVQRLAKQLGLAGWVRNYSGHVQILVRGDRGSLDQFAMDL 68 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPG 120 P AR +E ++ +F I +S G ++ + PD + C CLAE++ P Sbjct: 69 IAKAPAFARP-QIESIVPTYTDEFDDFLIVESGSGGLSAVELAPDQSICEDCLAEIHDPT 127 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 RRYRYPF NCT CGPR+TIIR +PYDR T MA F LC C EY DP DRRFHA+P+A Sbjct: 128 ARRYRYPFANCTQCGPRYTIIRKLPYDRANTTMADFALCRRCRGEYADPNDRRFHAEPIA 187 Query: 181 CPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP+CGP L +V+ E + AL AA+ L+ G VA+KGIGG+HL CDA +AVA Sbjct: 188 CPDCGPRLRFVAADGDLAVENDDALAAAVDLLRRGLTVAVKGIGGYHLLCDATRESAVAR 247 Query: 239 LRARKHRPAKPLAVMLPV--------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR K+RP KP AVM+P + L P+ PIVLV K+ L + Sbjct: 248 LRQSKNRPHKPFAVMVPTDDKLAWRRLAAIDVVEEAALLDPSRPIVLVRKRPESPLAPAV 307 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 A + VG+MLP +PL HLLL + P+V TS N+SG+P L DGFL Sbjct: 308 ASGMAYVGLMLPYSPLHHLLLDAFEKPVVATSANISGEPVLTDAADVERRLARCCDGFLH 367 Query: 351 HNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I + DD VV+ LR RG P + P P+L G LK T L Sbjct: 368 HDRAIERPADDPVVQVIAGQMKSLRLGRGTAPLTIKTPYLLP--EPILACGGQLKTTVAL 425 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 G++ V+S H+GD+ + + +A +Q++Y +++VHDAHP + S++W Sbjct: 426 AFGDRIVISPHIGDMGNMRSLRVFEQAANGLQSLYGTVARHIVHDAHPDFTSTRWTSRQR 485 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 L + + HH AHA+A EH ++ DG+G G++G WGGE L + Sbjct: 486 LKSAAIQHHLAHASALAGEHG---REAPMLVFAWDGLGFGQDGTSWGGETLMGSPGRWRR 542 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 +G + + L GGD A +PWR+ + C +W N+ + + + R E Sbjct: 543 VGTIRPIRLVGGDRVALEPWRSACSVCWEAGIDWGNH-------RPEFVDVRRVWETKSG 595 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS-CHGVTHPVTMPRVDNQLD 646 S+ GR FDA AA L +SY+G A +E++A S PV +D Sbjct: 596 TLETSAVGRLFDAAAALL-GLAEAVSYDGHAPALVESIAGSLPDASPLPVLEAGDLRIMD 654 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 L + PV++RA AFH ALA A R + ++ G ++ +GGV NRLL Sbjct: 655 WTPLVPLLLEAEVPVSRRAAAFHAALAATILADARYRRSVDGTNSVGLTGGVFQNRLLTE 714 Query: 707 RLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 R L F +L + +P DGGLS GQ V AAR Sbjct: 715 RAVALLKCDGFEILLHERVPPNDGGLSFGQAVEFAAR 751 >UniRef50_B6WUH9 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUH9_9DELT Length = 845 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 320/842 (38%), Positives = 424/842 (50%), Gaps = 106/842 (12%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQL 61 L G+VQGVGFRPF+++LA + L G V N DGV + ++ PE F V+L Sbjct: 3 QHKRTALLAAGQVQGVGFRPFIYRLAVEGGLSGSVGNTSDGVRIEVQGPPEQVDAFAVRL 62 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPG 120 + PPLAR+ +E TEF I S G + + PD C CL +M+TPG Sbjct: 63 RRELPPLARLTRLEVTDLPTVDGETEFVIVASHGHAGHSVLVSPDVGICEDCLRDMHTPG 122 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 R+ Y F NCT+CGPR+TI R++PYDR T MA FP CP C+ EYRDPLDRRFHAQPVA Sbjct: 123 NPRFGYAFTNCTNCGPRYTITRSIPYDRATTSMACFPFCPRCEAEYRDPLDRRFHAQPVA 182 Query: 181 CPECGPHLEWVSH------------------------GEHAEQEAALQAAIAQLKMGKIV 216 CP+CGPHL V + A A+ A A L+ +++ Sbjct: 183 CPQCGPHLWLVDNPLLPPGGTLPPDSAPAGWPGPETLPSEASMRDAVARAAALLRDDRLL 242 Query: 217 AIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTT 270 A+KG+GGF LACDAR++ +V+ LR RK RP KPLA+M+P LP LL Sbjct: 243 ALKGLGGFQLACDARSARSVSLLRLRKRRPHKPLALMVPDLATARELCDLPPEHEALLLC 302 Query: 271 PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL-------QCP---LVM 320 P PIVL + L IAPD +G+MLP PL +L EL P LVM Sbjct: 303 PEKPIVLCPARK-GCLPPSIAPDTAAIGIMLPYTPLHAVLFDELVRLTAAAGEPAPVLVM 361 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV--VR----------ESG 368 TS N SG+P + N +AL L +AD +L+H+RDI+ R+DDSV VR + Sbjct: 362 TSANASGEPICLGNREALRRLAHLADAWLLHDRDILVRVDDSVAGVRPLPADGEQPAATP 421 Query: 369 EMLRRSRGYVPDALALPPGF-KNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGI 427 RR+RGYVP + LP + ++P VL G +LK T CL RG +A +SQH+GDL + Sbjct: 422 FFYRRARGYVPRPVMLPEAWGSDLPCVLGAGGELKATLCLTRGNEAFVSQHVGDLENAPT 481 Query: 428 QMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAAC 483 + E R +Q++ + P VV D HP ++S++ AR LP + HH AHAA+ Sbjct: 482 FGFYEEVARHLQDLLEVRPAAVVCDLHPDFLSTRHATELARREGLPLWHLQHHAAHAASV 541 Query: 484 LAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR--VNYRECEHLGGLPAVALPGGDL 541 L EH G +AL LDG G+G + ++WGGE L ++ + LG L LPGG+ Sbjct: 542 LTEHGHT---GPALALALDGTGLGTDKSIWGGELLFMELDAPRWQRLGRLAPFRLPGGEA 598 Query: 542 AAKQPWRNLLAQCLRFVPEWQNYS------------ETASVQQQNWSVLARAIERGINAP 589 A ++PWR L L+ + + + Q + ++ RG+N P Sbjct: 599 AIREPWRIALGLALQTGMAPEVLTGIWTAGGESGDDVRRAPQAMAVTAVSEMWRRGLNCP 658 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV----------------- 632 SS GR FDAV+AALG ++YEG+AA LE AA Sbjct: 659 STSSAGRLFDAVSAALGLCTH-ITYEGQAAIRLEDAAARSPLPEQWWRMGPEELRAPQPQ 717 Query: 633 -----THPVTMPRVDNQLDLATFWQQWLNW--QAPVNQRAWAFHDALAQGFAALMREQAT 685 P+T QLD + L + PV A FH LAQGFAAL A Sbjct: 718 HELLSALPLTEEGGLWQLDGPALFAAVLAQRHRLPVEDLAARFHWQLAQGFAALAVRAAG 777 Query: 686 MRGITTLVFSGGVIHN--RLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 G+ + SGGV+ N L T L Q +P GDGG++LGQ A A Sbjct: 778 PTGVRVVGLSGGVMQNALLARLLPLLLAAHGLTPLCQQEVPPGDGGIALGQAAWAQACLR 837 Query: 744 AG 745 AG Sbjct: 838 AG 839 >UniRef50_Q2BN41 Hydrogenase maturation protein HypF n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN41_9GAMM Length = 782 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 295/772 (38%), Positives = 401/772 (51%), Gaps = 47/772 (6%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQ--- 63 Q+ I G+VQGVGFRPFV+ LA +L + G V N +GV + + L Sbjct: 4 YAKQIEIHGQVQGVGFRPFVFNLANRLGIVGHVANGPEGVSIFAQGSSSQLTDLLESLQT 63 Query: 64 --HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGE 121 P +A++ S+ + F I +S G ++ + PDAA C CL E+ P + Sbjct: 64 AHEQPTMAKVHSLVATHAEAVRGLDTFEIVKSAEGEVDLAVTPDAAVCQDCLEELFDPND 123 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RRY YPFINCT+CGPR+++I+++PYDR T MA F LC CD+EY+ P +RRFHAQP AC Sbjct: 124 RRYLYPFINCTNCGPRYSLIKSLPYDRANTTMAPFTLCSPCDQEYKHPENRRFHAQPTAC 183 Query: 182 PECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 CGP L++ + AA+A ++ GKIVAIKGIGGFHL CDA+N AV LR Sbjct: 184 ASCGPSLKFRGVDGK-TDPDPIGAALALMQQGKIVAIKGIGGFHLVCDAQNPEAVQRLRD 242 Query: 242 RKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLN 295 RK RP KP AVM L L A + L API L K L D +AP LN Sbjct: 243 RKQRPEKPFAVMGANLESLRSIAELSRAREERLKGHDAPICLCPK-VEDALPDVVAPGLN 301 Query: 296 EVGVMLPANPLQHLLL-QELQCP-------------LVMTSGNLSGKPPAISNEQALADL 341 +G+MLP P+ +LL + Q P LVMTS NLSG P +E+AL L Sbjct: 302 WLGIMLPHTPIHYLLFHRAAQQPTGTAWLKEQQTLTLVMTSANLSGNPLITQDEEALKQL 361 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKN-VPPVLCL 397 IADGFL+HNR I R DDSV+ ++R RG P + LP K VL + Sbjct: 362 AHIADGFLLHNRAIETRCDDSVISMVSSQASIVRSGRGLAPTRVKLPDSLKGLGKSVLAV 421 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA KNT CL +G+ A +SQ++GDL + E + + ++ D P VV D HP + Sbjct: 422 GAFFKNTICLTKGDSAYVSQYIGDLDNPECCRNLSETVAHLCSLLDIRPDLVVADLHPDF 481 Query: 458 VSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALW 513 SS++ARE +P V HHHAH AA + EH+ GD++ + LDG+G+G++G LW Sbjct: 482 YSSRFAREYAQANQIPLMQVQHHHAHVAAVVCEHEID---GDLLGVALDGLGLGDDGQLW 538 Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ 573 GGE L+V+ E + + +PGGD AA++PWR A E + + + Sbjct: 539 GGELLKVSGHRSERIAHFSKLKMPGGDRAAREPWRIASAALHELNIESEQVIHLK--ENE 596 Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-ASCHGV 632 ++V+ + +E+ +N P SS GR FDAVAA L YE AA LE+ A Sbjct: 597 GYAVVQQLLEKNLNCPETSSAGRLFDAVAALLDI-KQRSDYEAHAAMLLESAAWQYLKSN 655 Query: 633 THPVT---MPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 P + N+L + Q+ A FH L G + + + + Sbjct: 656 PWPQESPLLKTEGNELVIWPLLQRLTEC-EDKGYAAALFHRQLVDGLVSWVTQAGERYNL 714 Query: 690 TTLVFSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQGVIAAA 740 TT+ +GG N+LL + L LA +L Q LP DG +SLGQ IA Sbjct: 715 TTVALAGGCFLNQLLLSELQAVLAEQMQVLVAQKLPCNDGAISLGQAHIALQ 766 >UniRef50_C1D517 HypF n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D517_LARHH Length = 794 Score = 840 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 291/772 (37%), Positives = 400/772 (51%), Gaps = 45/772 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE---TFLVQLYQHCP 66 Q +RG VQGVGFRPFVWQLA++L + G + N G+GVE+ + P F L++ P Sbjct: 25 QWLLRGLVQGVGFRPFVWQLARRLGIQGQIRNTGEGVEILAQGQPARLAAFERALHEERP 84 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 PLA + R+ +F+I S I PD ATCP CL E+ TP +RR+RY Sbjct: 85 PLAEFELTARQSLPADPALGDFSIGSSQESGHGATIPPDIATCPECLRELFTPADRRHRY 144 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFINCTHCGPR+TI R +PYDR T MAAF LCP C EY DP RRFHA+P+ACP CGP Sbjct: 145 PFINCTHCGPRYTITRQLPYDRAQTSMAAFGLCPLCQHEYLDPSSRRFHAEPIACPVCGP 204 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + L+MG+ VAIKG+GGFHLAC+AR++ AVA LR KHRP Sbjct: 205 QLRLTDRFAVPLKGDPVTGTLQFLRMGRCVAIKGLGGFHLACNARSAEAVARLRMLKHRP 264 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKK-YVPELCDDIAPDLNEVGV 299 ++PLAVM + LL +P PIVL+ K+ + IAP +N VGV Sbjct: 265 SRPLAVMALNLASVETFCHVSPEEAALLQSPKRPIVLLQKRAEADQYLPGIAPGMNTVGV 324 Query: 300 MLPANPLQHLLLQE--------------LQCPLVMTSGNLSGKPPAISNEQALADLQGIA 345 MLP P+ L+ E VMTS NLSG+P N+ A L +A Sbjct: 325 MLPYTPIHWLMFHESLRRPAGLDWMEAPCADVWVMTSANLSGEPIVTDNDDARHRLNTVA 384 Query: 346 DGFLIHNRDIVQRMDDSV---VRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 D FLIHNR + R DDS+ + +LRR+RG+ P L + VL +G K Sbjct: 385 DAFLIHNRQVAARCDDSLMMMIDHEPHLLRRARGFAPAPL---ALRHDGATVLAVGGPDK 441 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NT L+RG QA++S H+G L A+R ++ + P + D P +SQ Sbjct: 442 NTVTLLRGTQALVSPHIGGLDHPLTCETHNSAIRHLERWANAEPGCIACDLDPDNHASQH 501 Query: 463 AREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 A ++ LP + HHA +A LAEH + V+ L +DG G G +G WGGE L Sbjct: 502 AEQLAGLRQLPLLRIQRHHALVSAVLAEHDVDV---PVLGLVMDGGGTGADGNEWGGELL 558 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 RV+ E L LP + LPGG+ A+++PWR +R + + ++ ++ L Sbjct: 559 RVHGVSMERLAHLPHIPLPGGERASREPWRVAAGWLIRNGLGDE--AARRYGREPSFVEL 616 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 + + + P +SS R+FDA+A+ G + S+ EA LEALA + + Sbjct: 617 SEQVTHQLRCPDSSSSSRWFDAIASLAGLC-SRQSFSSEARLRLEALARPVAPLAGGWRL 675 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + QLD + L + A +H + A A + A + I +V +G Sbjct: 676 D-DNGQLDWSPVVHHLLTL-TDAEEIASLWHASCAAAVAEWVIRHARQQQIDHVVLAGSS 733 Query: 699 IHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 NR+L+ L +L A TLL + LP+G G LSLGQ +A +WLAG Sbjct: 734 CSNRVLQQALHRHLLQAGLTLLESRQLPSGAGALSLGQACVA-RQWLAGRAS 784 >UniRef50_Q2NE87 HypF n=5 Tax=Methanobacteriaceae RepID=Q2NE87_METST Length = 770 Score = 840 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 239/774 (30%), Positives = 380/774 (49%), Gaps = 43/774 (5%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQ 60 L + G VQGVGFRP +++LA+ + L+G V N G+ VE+ ++ D + F+ Q Sbjct: 1 MKQYTANLLVDGIVQGVGFRPTIYRLAKVMKLNGYVRNMGNIVEIVVQGTYDDIKLFIDQ 60 Query: 61 LYQHCPPLARIDSVEREPFI-WSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNT 118 + +H P + I+++ + + +FTI S+ + I PD + C CL E+ Sbjct: 61 IQEHKPIRSEINNIHVDIHEQTTPKYNDFTIVNSSNEISGTAVIPPDMSICDECLDEILD 120 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 + Y YPF CT+CGPRFTII +PYDR T M FPLC C++EY +PLDRR+HA+ Sbjct: 121 TNNQHYYYPFTACTNCGPRFTIIDEVPYDRKNTTMKKFPLCKHCNQEYTNPLDRRYHAEA 180 Query: 179 VACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CP+CGP + ++ + G I+AIKGIGG HL C +A+ Sbjct: 181 TCCPDCGPEVYLY-KDGKIPTRDPIRQTSQLIDEGNIIAIKGIGGTHLVCKTSTDDAIEK 239 Query: 239 LRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR R R +P A M P +++L + A PIV+++K L ++P Sbjct: 240 LRERLGRKTQPFACMTPDIQTASLFVTYTQQEKEVLQSVAKPIVVLNKSPEYNLSPQLSP 299 Query: 293 DLNEVGVMLPANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 +L+ GVMLP L HLL + P VMTS N+ G P I N++ L+ IAD +L+H Sbjct: 300 NLHNQGVMLPYTGLHHLLFKYTLEPAYVMTSANMPGNPMLIDNKEITTKLEDIADYYLLH 359 Query: 352 NRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 +R I+ R DDSV+R +RRSRGYVP +L LG +L TF ++ Sbjct: 360 DRKILNRCDDSVIRFRNNKPSFIRRSRGYVPKPFDF-TKINTTKNILALGPELDVTFSIL 418 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWARE-- 465 + + SQH+G+ S ++A++ + + Y+V D HP + +++ A+E Sbjct: 419 KEGKCYPSQHIGNTSKYKTLEFMKDAIKHLLKLTRTDKIDYIVADMHPEFNTTKLAKELS 478 Query: 466 --MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR 523 N V HHHAHAA+ ++EHQ +++A+T DG+G GE+G +WGGE L +N Sbjct: 479 KKYNTELIQVQHHHAHAASLMSEHQL----DEMVAITADGVGYGEDGNIWGGEVLYLNNT 534 Query: 524 E-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ-------NYSETASVQQQNW 575 ++ GGL +PGGDL+ K P R + + + +YS+ ++ Sbjct: 535 GEYKNHGGLTLQPMPGGDLSTKYPIRMAMGILYNIMDTEELRNLMKTDYSDYFKYGEKEV 594 Query: 576 SVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV--- 632 + + +E N SS GR D+++ LG + YEGE + LE++A + Sbjct: 595 DITLKQLENNFNTAQTSSMGRVLDSISVLLGIS-KNRGYEGECSMKLESVAREGFDLLKI 653 Query: 633 THPVTMPRVDNQLDLATFWQQ---WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 + ++ + + + +++ A A LA+ + + A Sbjct: 654 EPIYEIKNNKTLINTSKLLYEVVKLMKSGVGIDEIACAAQRTLAEALSKIAINTAKAYNT 713 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + +GGV +N + + L +T + + GDG +S+GQ IA + Sbjct: 714 KIIGVTGGVFYNEYISKVVKETLTNEGYTYIQHKQTCPGDGSVSMGQCAIAGWK 767 >UniRef50_C7I132 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Thiomonas intermedia K12 RepID=C7I132_THIIN Length = 787 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 347/768 (45%), Positives = 447/768 (58%), Gaps = 31/768 (4%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPL 68 R+RG VQGVGFRP VW+LA+ L+L G V ND DGV + P+ +L HCPPL Sbjct: 21 RVRGVVQGVGFRPMVWRLARDLDLSGTVRNDADGVLIAAWGTPDALDALPARLRAHCPPL 80 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 ARID+++ P + P +FTI S GG T++ PDAA+CPACLA++N P +RR+R+ F Sbjct: 81 ARIDAIDVVPLAPGEAPDDFTIVPSQGGHAATEVTPDAASCPACLADVNNPADRRWRHAF 140 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 NCTHCGPR +I+ A+PYDR T MA F +CP C EY DP DRRFHAQP+ACP+CGP L Sbjct: 141 ANCTHCGPRLSIVSAVPYDRASTAMADFAMCPRCATEYADPADRRFHAQPIACPDCGPTL 200 Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +GE + A+ L+ G+I+AIKGIG FHL DA ++AVA LRARK RP K Sbjct: 201 WLEQNGERIVG-DPIATAVDLLRAGRILAIKGIGSFHLVVDATAADAVARLRARKRRPHK 259 Query: 249 PLAVMLPVADGLPDAA------RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 PLA+M D + A + L+ PAAP+VL++ L IAPD +G MLP Sbjct: 260 PLALMARDLDVVRRYAALTSDDERALSGPAAPVVLLEATEPHALPYAIAPDTRLLGFMLP 319 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +PL HLLL PLV TSGN SG PP I N +AL L IAD +L+H+R I+ R+DDS Sbjct: 320 MSPLHHLLLASFDTPLVFTSGNASGAPPCIDNAEALDRLDDIADAYLLHDRPILNRLDDS 379 Query: 363 VVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 V+R + + LRRSRGY P AL LP GF + P V LGA+LKNT CL+ G +A+LSQH Sbjct: 380 VLRRIAGTLQPLRRSRGYAPGALPLPHGFGDAPAVTALGAELKNTACLLAGGRAILSQHF 439 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLH 475 GDL + L + ++D P + D HPGY +++ A L V H Sbjct: 440 GDLGGTSAAAEAARGLERLSQLFDHDPDIIAVDLHPGYHATRQGRELAARDGLGLAEVQH 499 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 HHAH AAC+A+H PL+G ++ L LDG+G+G++G LWGGE LRV+Y L L VA Sbjct: 500 HHAHIAACMADHGHPLNGPPILGLALDGLGLGDDGMLWGGELLRVDYTTSTRLASLRPVA 559 Query: 536 LPGGDLAAKQPWRNLLAQCL------RFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 LPGGD A++QPWRNL AQ L + + ++ + LAR + G +AP Sbjct: 560 LPGGDAASRQPWRNLAAQLLALPAASELLARHADLPAVRHLRGKPLDTLARMVSTGAHAP 619 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASC-HGVTHPVTMPRVDN--QLD 646 LASS GR FDAVAAALG ++EG+AA LE+LA S + + VD +LD Sbjct: 620 LASSTGRLFDAVAAALGLHAEAQTFEGQAAMTLESLATSSTDAGAYAFALTEVDGLLRLD 679 Query: 647 LATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 A W L A F + L +A + A + SGGV N L Sbjct: 680 PAPLWPALLADLQRGVAPGTVARRFLNGLTAAWAEAIAAVAGNGPFAAIALSGGVFQNAL 739 Query: 704 LRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 + L L DF + + +PA DGGL+LGQ VIAAAR L N Sbjct: 740 ISQLLHDRLCDFDLPVWMHRRVPANDGGLALGQAVIAAARALQPNWSN 787 >UniRef50_B2KBC6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBC6_ELUMP Length = 736 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 256/749 (34%), Positives = 376/749 (50%), Gaps = 38/749 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 ++ I G VQGVGFRPF+++ A + L G V N GV + + F++ + Q+ Sbjct: 3 RKRILINGVVQGVGFRPFIYKSALKFRLSGFVQNTSAGVITEAQGSKENINKFILFIKQN 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERR 123 CPP A+I+ ++ + F I S + T + PD A C C E+ P +RR Sbjct: 63 CPPQAKIEDLKITDIK-EKKEKGFLIIASKKDNIQTVFLPPDLAMCKDCGKEILNPKDRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 + YP NCT+CGPR +I + +PYDR T M+ F +CPAC KEY P RRFHAQP ACP Sbjct: 122 FLYPLTNCTNCGPRLSITKTLPYDRKATTMSKFKMCPACQKEYESPNSRRFHAQPNACPV 181 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP + + ++ + AL+ A L GKI A+K IGG+HLACDA+N AV +LR K Sbjct: 182 CGPQVFFKFKNKNFKGLKALKTAAVFLDKGKITAVKSIGGYHLACDAKNPKAVTSLRLSK 241 Query: 244 HRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RP KPLA+M + + L +PAAPIV+V KK +L I+ +LN Sbjct: 242 KRPYKPLAIMFKDLKTAKKYCFINKIEARALLSPAAPIVIVKKKKELKL---ISDNLNNY 298 Query: 298 GVMLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 G+MLP PL +L L+ LVMTSGN G + +A L IADGFL H R+I Sbjct: 299 GIMLPYTPLHKILFSLLKTDVLVMTSGNAKGGALCSGDGEAFKKLSKIADGFLYHEREIY 358 Query: 357 QRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 ++DDS++ +RR+RG+ P L K +L LGAD FCLV+ +A Sbjct: 359 NKVDDSIMFEALGKMRFIRRARGFAP--LPATLAKKAKKSILALGADKTAAFCLVKENKA 416 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 LSQ++GDL+ + AL + + PQ + D HPGY +++ + + Sbjct: 417 YLSQYIGDLNKKENGGFYLTALEKNKRLLGINPQVTIADLHPGYFTNKLPFK---NVNKI 473 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH AHA + AEH G +A+ LDG G+G +GA+WGGE L N + + Sbjct: 474 QHHAAHALSVAAEHNLK---GRFLAVNLDGSGLGSDGAIWGGEFLAFNNKNWKRAAYFEP 530 Query: 534 VALPGGDLAAKQPWRNLLAQCLR-FVPEWQNYS-ETASVQQQNWSVLARAIERGINAPLA 591 + LP GD + + W L + + +W NY +V +Q + + + I+ GIN + Sbjct: 531 LPLPAGDESVSEIWLLTLGAIKKIYGKDWTNYKYLFKNVPRQKFRLALKLIDNGINVYNS 590 Query: 592 SSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN--QLDLAT 649 SS GR FD V+ +Y+ +AA LEA + V M + + + Sbjct: 591 SSAGRVFDIVSHIA-LGITKTTYQAQAAMELEAKCLRL-KSPYKVVMEKQNGCYIIKTGE 648 Query: 650 FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 ++ L++ + + FH + ++ + + SGGV N++L Sbjct: 649 MLKEILSYSRSAEEISARFHAYMVYSVLETAKKL----KLKNICLSGGVFQNKVLLKGTV 704 Query: 710 HYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 + L A F + + P DGGL+LGQ Sbjct: 705 NVLKRAGFNVYLNEQTPCNDGGLALGQAW 733 >UniRef50_P28156 Carbamoyltransferase hypF n=10 Tax=Rhizobiales RepID=HYPF_RHILV Length = 759 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 290/746 (38%), Positives = 381/746 (51%), Gaps = 44/746 (5%) Query: 15 GKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE-DPETFLVQLYQHCPPLARIDS 73 G VQGVGFRPF ++LA+ + L G V ND GV + + D F + PPLARIDS Sbjct: 22 GAVQGVGFRPFAYRLARAMRLSGFVLNDSAGVLIEIEGRDANHFPEAVRTQAPPLARIDS 81 Query: 74 VEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTH 133 ++ + + F I +S GG T+I DAATC C E+ P R + YPF+NCTH Sbjct: 82 IDVLELVPAGGER-FEILESLGGRSATRIGADAATCDGCRRELTDPASRFFGYPFVNCTH 140 Query: 134 CGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSH 193 CGPRFTI RA+PYDR T MA+FP+C C +Y DP +RRFHA+PVACP CGP L Sbjct: 141 CGPRFTITRALPYDRAHTSMASFPMCRTCAADYVDPENRRFHAEPVACPNCGPRLS---- 196 Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM 253 ++ A+L+ G IVA+KG+GGFHL CDARN A+ LR RK KP AVM Sbjct: 197 -------HPIKEISARLEGGAIVALKGVGGFHLLCDARNDGAIGLLRLRKAGDQKPFAVM 249 Query: 254 LPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 + + +A LL +PA PIVLV + EL IAP L VG+ML P+ Sbjct: 250 VRDIEAARQLARPNEAEEALLISPARPIVLVAAR-AGELSGLIAPGLTRVGLMLAYAPVH 308 Query: 308 HLLLQELQC-------PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 HLLL EL LV TS N G+P N+ A L IAD + H+RDIV R D Sbjct: 309 HLLLDELSRSSPHCHAALVATSANPGGEPLVADNDDAGRRLVAIADLVVTHDRDIVVRAD 368 Query: 361 DS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DS V+ + +RR+RG+VP+ + + P V+ GADLKNT C+ RG +A LSQ Sbjct: 369 DSVMQVIDGAPAFIRRARGFVPEPVD---LGADGPSVIATGADLKNTICVTRGREAFLSQ 425 Query: 418 HLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHH 477 H+G L + RE + + +I D P++ D HP + S + A +NLP V HH Sbjct: 426 HIGGLDNAEAIRFQREVIAHLCSILDVKPEFAACDLHPDFRSVRTAEGLNLPIVPVQHHL 485 Query: 478 AHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALP 537 AH AA +A+ + G V+ L LDG G G +G WGGE + +++ + G L + LP Sbjct: 486 AHVAAVVADDRL---SGPVLGLALDGHGFGTDGTSWGGEIVVIDHHRWQRAGSLMPLPLP 542 Query: 538 GGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRF 597 GD AA++PWR +A + + + L + P+ SS GR Sbjct: 543 SGDRAAREPWRMGVAALQAAGRI--DLAPQLWPGHSGVTQLTAMFSGSMPTPVTSSLGRL 600 Query: 598 FDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW 657 FDA AA G YEG+AA EAL + + ++ D LD Sbjct: 601 FDAAAAIAGVRL-VQDYEGQAAMEFEALVRAPRCLAGGYSIG--DGTLDFRPLILHLAEQ 657 Query: 658 QAPVNQRAWA-FHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--AD 714 P A FH L G A A RG + GG + NR+L A LA L Sbjct: 658 GRPCGADAADVFHGTLIAGLADWAARGAAARGTRQVALGGGCMMNRVLAAGLARALRERG 717 Query: 715 FTLLFPQSLPAGDGGLSLGQGVIAAA 740 P+ PA DGG++LGQ A Sbjct: 718 LEPSLPRLAPANDGGIALGQPAYARQ 743 >UniRef50_A9F9D0 Hydrogenase maturation protein HypF n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F9D0_SORC5 Length = 783 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 284/781 (36%), Positives = 380/781 (48%), Gaps = 52/781 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 + LR+ G VQGVGFRPFV++ A L L G V N GVE+ ++ F+ L + Sbjct: 3 RLALRVYGIVQGVGFRPFVYRRASALGLGGWVRNRPGGVEIEVQGPERSLHAFVAGLTRE 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNT-QIVPDAATCPACLAEMNTPGERR 123 AR++ +E E Q F I S G + D A C C E+++ RR Sbjct: 63 PSAPARVERIEIERR-AEQDAGPFQILGSEAGNGARPSVPADLAVCEECAREVDSETGRR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 RYPF +C CGPR+TI+ +PYDR T M FP+CPAC EY DP DRRFHA+P+ACP Sbjct: 122 RRYPFTSCARCGPRYTILSGLPYDRARTTMDRFPMCPACAAEYADPSDRRFHAEPIACPA 181 Query: 184 CGPHLEWVSH---------GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP ++ V+ + AL+ A A + GK+VA+KG+GGFHL DA + + Sbjct: 182 CGPRVQLVAAARDPMDPGIRSSGSPDGALREAAAAVLAGKVVAVKGLGGFHLLVDATSPD 241 Query: 235 AVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYV----P 284 AVA LR RK R AKP AVM D + A L P APIVL+ + Sbjct: 242 AVALLRRRKRRDAKPFAVMFGSLDAVRGACRVSAAEADALRGPEAPIVLLRRLSPAAARV 301 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 + D +AP +G +LP PL L+L+ + P+V TSGNLS +P AL L GI Sbjct: 302 AIADAVAPGTPRLGALLPYTPLHRLVLELVGRPVVCTSGNLSDEPICTDASDALERLGGI 361 Query: 345 ADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 AD FL+H+R IV+ +DDSV R E+LRR+RG+ P L L + PP+L LG L Sbjct: 362 ADLFLVHDRPIVRPLDDSVARVGHAGVELLRRARGFTPLPLPLRI---DAPPILALGGHL 418 Query: 402 KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ 461 K+T L Q V+SQHLGD + ++ P+ + D HP Y S+ Sbjct: 419 KSTTALFFDGQVVVSQHLGDAHTAEGAALIERTALDLTRLFRVRPERIACDLHPDYAGSR 478 Query: 462 WAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 A ++ P V HHHAH AAC+AEH G V+ L DG G G +GALWGGE Sbjct: 479 IAEQLAAAFRAPLVRVQHHHAHVAACVAEHGLD---GPVLGLAWDGAGYGLDGALWGGEA 535 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L V+ L + LPGG+ A ++P R+ L + E A + Sbjct: 536 LVVDGASFRRAAHLRSFPLPGGERAMREPRRSALGLLWELLGEGARDHARAWFRDAELGP 595 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPV 636 L + RG +P +S GR FD VAA S+EG+AA LE LA + +P+ Sbjct: 596 LFSMLARGTGSPRTTSVGRLFDGVAAL-AGLRGAASFEGQAAMELECLAEAAGERAGYPL 654 Query: 637 TMP----RVDNQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 + + +D L A FH A + A G+ Sbjct: 655 PLRASAAGMPAVIDFGPLLDAVLGDRRDGVSPGVIAARFHA----ALADVAEALAAASGL 710 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V +GG N LL A + L + P+ P GDGGLSLGQ ++AA R E Sbjct: 711 GRVVLAGGCFQNALLAASIRERLTARGVEVFTPRLYPPGDGGLSLGQVLVAARRGTDAES 770 Query: 748 Q 748 Sbjct: 771 D 771 >UniRef50_C5F0N3 Hydrogenase maturation protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F0N3_9HELI Length = 770 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 245/775 (31%), Positives = 374/775 (48%), Gaps = 58/775 (7%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLY 62 L + G +QGVGFRPFV+++A + L G V N+ GV++ ++ + E+ FL +L Sbjct: 1 MQTYILNLTGTIQGVGFRPFVYKIATKYFLKGYVLNNNQGVKILIQGNQESIQNFLKELK 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGE 121 + P A+I S+ ++ ++ ++F I++S + I D A C C+ E+ P + Sbjct: 61 -NPPSAAKITSITQKKIPNKKIFSDFEIQKSQTHSIKTATIPADLALCQECINELFNPKD 119 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPFI+CT+CG R+++I ++PYDR T MA F +C C +EY + RRFH++ C Sbjct: 120 RRFLYPFISCTNCGGRYSLIHSLPYDRQNTAMANFKMCKICQQEYTNSNSRRFHSEINCC 179 Query: 182 PECGPHLEWVSHGEHA--------------EQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 P CGP + + +H + ++ AIA LK GKI+A+KGIGG+ L Sbjct: 180 PNCGPQVFFTTHLNYNDKPLLDSQIIPFLKTTPNPIKNAIAALKNGKILALKGIGGYALI 239 Query: 228 CDARNSNAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKK 281 CDA N ++ LR RK+RP KP A+M L + LLT+ APIVL K Sbjct: 240 CDATNQESIQILRDRKNRPKKPFAIMCKDLKMAMSFASLNKKEKNLLTSQIAPIVLSYAK 299 Query: 282 YVPELC-DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 +L IAP+L +G++LP PL +L+ E++ PL+ TS N+SG+P Sbjct: 300 TKNKLPLHLIAPNLATLGIILPYAPLHYLIFNEIEFPLIFTSANISGEPIIKDFYTITQK 359 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 LQGI DG L++NRDI +DDS++R ++LRR+RGY+ D P + L Sbjct: 360 LQGICDGVLLYNRDIFNPIDDSLIRILNKKTQILRRARGYLSDIPFSTP--HTQKNFIAL 417 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA K+TFCL + +LS HLGDL++ + +++ L L Y D HP Y Sbjct: 418 GAQQKSTFCLKFHNKLLLSPHLGDLNNLESFLNFKQNLNLFTQQYQAKIDTFCADLHPNY 477 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 + N T + HH AH + +AE++ +V+ + DG G G +G +WGGE Sbjct: 478 AYKELLPSKN--THFIQHHFAHLLSNIAENRI---SSEVLGVIFDGTGYGLDGNIWGGEF 532 Query: 518 LRVNYRE---CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASV---- 570 L N ++ + + L GG++A K R + E + + Sbjct: 533 LFYNPKKPLTFQRIASFAPFYLLGGEVAIKDIRRLGIEALFVAFKEHYKTLKLPLLESLK 592 Query: 571 QQQNWSVLARAIERGINA--PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 + +L ++ N +S GR FD VA+ T SYEGE LE+LA Sbjct: 593 KDYGKDILTFFYKQHQNTQNYTCNSVGRIFDMVASLCNLTQKT-SYEGEGGMLLESLAYK 651 Query: 629 CHG---VTHPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMRE 682 + N + T Q+ L + P+ A FH LA ++ + Sbjct: 652 AQKNKIQAISYSFAIKKNIILWDTMIQEIYYDLQNRIPIENIALNFHFTLANIIKHIVNQ 711 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI 737 T+ SGG N +L L + + Q +P DGG+S GQ Sbjct: 712 Y------ETIALSGGCFQNAVLTQLTLQILKNKKVFLNQEIPCNDGGISFGQAYY 760 >UniRef50_Q1ZGN1 Hydrogenase maturation protein HypF n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGN1_9GAMM Length = 842 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 267/835 (31%), Positives = 378/835 (45%), Gaps = 92/835 (11%) Query: 1 MAKNT----SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---D 53 M+K + + G VQGVGFRPF++ LA+Q L G V N GV + ++ + Sbjct: 1 MSKKEAPKLQTRRLIEVCGIVQGVGFRPFIYLLAKQHQLQGWVLNHPQGVHIDVQGPENE 60 Query: 54 PETFLVQLYQHCPPLARIDSVE-----REPFIWSQLPTEFTIRQST---------GGTMN 99 + F+ + Q PPL++IDS+ P F+IRQS+ + Sbjct: 61 LDIFIKNIRQQAPPLSQIDSITCKSSAVHSLDDMPKPGVFSIRQSSLSLAKNKSNDTQFS 120 Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I D + C ACL ++ P R YRYP NCTHCGPRF+II A+PYDR T MA F +C Sbjct: 121 THISADFSICNACLDDIRDPNSRYYRYPLTNCTHCGPRFSIINALPYDRKNTSMADFVMC 180 Query: 160 PACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEA----ALQAAIAQLKMGKI 215 P C + Y DP +RR+HAQP++CP CGP ++W + LQ A + ++ GKI Sbjct: 181 PECLQAYEDPANRRYHAQPISCPRCGPQIQWRMSDGSTSPSSDSMQVLQKAASAIRAGKI 240 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLP------DAARQLLT 269 +AIKGIGGFHL CDA N AV LR K+RP KPLA+M+ +A LL Sbjct: 241 IAIKGIGGFHLVCDASNQKAVNKLRISKNRPLKPLAIMVKDRTQAQHYVQGGEAEWALLG 300 Query: 270 TPAAPIVLVDKKYVPE-------------LCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 + PI L+ K L +IA ++ +G+MLP PL +LL ++ Sbjct: 301 SQQRPITLLQKHDALSLQSVSNKHNKILDLASNIAENVPYLGIMLPYTPLHYLLFDHIES 360 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRR 373 LV TS N SG+P I + Q GF+ H R IV DDS+V SG +MLR Sbjct: 361 ALVFTSANYSGQPILIEGDDVATKFQHCIAGFIDHPRKIVNSCDDSLVHFSGGQRQMLRL 420 Query: 374 SRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV-----RGEQAVLSQHLGDLSDDGIQ 428 RG+ P ALP PVL GA K +F L + QA++S ++GDL++ +Q Sbjct: 421 GRGFAPYYFALPNTLT--QPVLATGAQQKVSFALGAPQNEKQSQALISPYIGDLNNLEMQ 478 Query: 429 MQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACL 484 ++ + + ++ + D HP Y + +WA + + TV HH+AH + + Sbjct: 479 QDYQHRVMSLTLLHQIKVAHYCCDKHPRYATHRWAHQQVNDNSADISTVPHHYAHVLSVM 538 Query: 485 AEHQWPLDGGDVIALTLDGIGMGE---------------NGALWGGECLRVNYRECEHLG 529 AE+Q V+ + DG G+G+ N LWGGE L + + Sbjct: 539 AEYQLQ---QRVLGFSFDGTGLGDIDSTQHAHNPLTPSKNCTLWGGEVLIADIKNSHRCY 595 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERG 585 L A L GG+ A P R L A L + Q + S + E+G Sbjct: 596 SLKAFRLIGGEQAITSPARLLFALLLEYYSIKQIQMMHLSAFEKLGAHQLENWHVLWEKG 655 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS-------CHGVTHPVTM 638 IN+P SS GRF DA A L T+S+EGE LE LA + Sbjct: 656 INSPYTSSIGRFIDAYCALLS-GLETISFEGECGLLLEQLALNEGNKNALSKREKSAPLF 714 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDA--LAQGFAALMREQATMRGITTLVFSG 696 + D + + + A L +AL+ + +V G Sbjct: 715 TLNAGEFDFLPLLKHVIERLTADKSTSLYQQGASLLFTQLSALIITISDQYPTLPIVLCG 774 Query: 697 GVIHNRLLRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQN 749 GV NR+L + L Q++P DGG++ GQ A + N Sbjct: 775 GVFQNRVLMDCVLSQLKRRKKTYYVSQTIPLNDGGIAAGQLWFVAHKNTLENKLN 829 >UniRef50_A4XJQ0 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Clostridia RepID=A4XJQ0_CALS8 Length = 757 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 230/766 (30%), Positives = 353/766 (46%), Gaps = 39/766 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLY 62 + RG VQGVGFRPF++ LA+ L L G V N G+GV + + + Sbjct: 3 MKRYRYIFRGLVQGVGFRPFIYNLAKDLGLVGFVKNIGEGVLAEFQGELKSTAAIDEYIE 62 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 + P A+I+++E+ + +F I S+ G ++T + D C C E G R Sbjct: 63 KKLPRNAKIETIEKYEIEPNFNEDDFYILDSSKGKISTIVPYDLGLCEECKREFYDKGHR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 + PFI+C +CGPR+TII ++PYDR T M F C C KEY P +RRF+AQ CP Sbjct: 123 HFMNPFISCINCGPRYTIIESLPYDRDRTSMKEFEFCCDCKKEYYTPDNRRFNAQSTTCP 182 Query: 183 ECGPHLEWVSHGEH----AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 CGP L S E L +++ GKI+AIKGIGGFHL D N +V Sbjct: 183 VCGPRLFLYSFVEKKHIDGSNLELLDRVCYEIEKGKIIAIKGIGGFHLVVDPYNKESVER 242 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 L K+R KPLA++ + + +A ++ +P PI+L ++K L + Sbjct: 243 LFRSKNREGKPLALVCKDIETVKKYCDVSEAEEEIFNSPRCPIILFERKTDHFL--HVNA 300 Query: 293 DLNEVGVMLPANPLQ-HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 L+ +G+M P+ ++L + + L+ TS NLSG P I ++AL L IAD L H Sbjct: 301 GLHTLGIMRAYTPILDYILTKTNRDLLIATSANLSGIPMIIDEDEALEKLCDIADFVLYH 360 Query: 352 NRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 NR IV+R DDS V+++ ++R RG+ P L + +L LG K T L Sbjct: 361 NRKIVRRCDDSVGFVLKDKFVLIRSGRGFAPITFKLKEKAVD-KNILALGGHEKTTIALK 419 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAR 464 + ++ +LSQ+LGDL + +L + ++YDF Y+ D H Y ++ + A+ Sbjct: 420 KEDEVILSQYLGDLDTKEYIDFYEGSLIDLISLYDFDFDYIACDYHKDYYTTSLAQKIAK 479 Query: 465 EMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE 524 + N V HH AH +C+ E I DG G+G +G +WG E ++ E Sbjct: 480 DQNKEVVFVQHHLAHIYSCMLEKNLQS----CIGFAFDGTGLGLDGKIWGSEGFVIDGLE 535 Query: 525 CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIER 584 + + L L GG A K+P R ++E+ + + + + Sbjct: 536 AKRVFHLQYYPLVGGQKAIKKPVRLAY---YFSKIISPEFAESFFGGNEFLHQIFKTAQT 592 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP-RVDN 643 N PL SS GR FD V LG S+E + LE +A + M + + Sbjct: 593 -FNYPLTSSMGRLFDIVGVLLG-CGEKNSFEAQIPMLLETIADRNENGFYIFLMNFKHEI 650 Query: 644 QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH 700 ++++ QQ ++ + FH+ +A+ + + +V SGGV Sbjct: 651 EINIVDILQQIIHDIKRNVDRRIISAKFHNTVAKIVVEVAKVLRENYNKDIVVLSGGVFQ 710 Query: 701 NRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLA 744 N+LL ++ L F + F P DGG+S GQ Sbjct: 711 NKLLLSKTVSLLEEEGFKVFFNTVFPINDGGISAGQVYYTLQLLKN 756 >UniRef50_Q6NIU7 Putative hydrogenase maturation protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NIU7_CORDI Length = 744 Score = 832 bits (2151), Expect = 0.0, Method: Composition-based stats. Identities = 284/766 (37%), Positives = 380/766 (49%), Gaps = 62/766 (8%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE----DPETFLVQLYQ 63 + +RG VQGVGFRP V +A + + G N+ V V + + F+ + Sbjct: 3 RTRYLLRGVVQGVGFRPHVAAVAARHRITGLCGNNDLEVFVEAQALSEDILDAFISDVLA 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGER 122 PPLA + +V + T+F I S T I PD ATCP CLA+M P R Sbjct: 63 TLPPLAHVVTVTQSSCPPISHETDFRIVASEHLPGARTLIPPDVATCPDCLADMADPNNR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RYRYPF CTHCGPR +II +PYDRP T M FP+CP C KEY DP DRR+HAQP++CP Sbjct: 123 RYRYPFTTCTHCGPRLSIIEDLPYDRPLTTMKHFPMCPQCAKEYSDPHDRRYHAQPISCP 182 Query: 183 ECGPHLEWVSHGEHAEQ------EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +CGP L + + + + GKIVA+KG+GGFHL CDA N AV Sbjct: 183 DCGPSLWVEATETPGRPPLRLRVDDPIAYCRDAISKGKIVAVKGLGGFHLMCDATNDEAV 242 Query: 237 ATLRARKHRPAKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDK--KYVPELCD 288 TLR RKHRP KPLAVM+P + + AR +LT PA PIVLV K +L Sbjct: 243 RTLRERKHRPTKPLAVMIPDVEKARELARLDADTTAVLTDPAHPIVLVPTTSKQRLKLSL 302 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGF 348 IAP L+ VG++LP PL LL + P+V TS N SG+P N+ A +L +AD F Sbjct: 303 LIAPGLDYVGLVLPYTPLHTLL---VDSPVVATSANNSGEPLCWDNDVARENLTHLADVF 359 Query: 349 LIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPP---VLCLGADLK 402 L+H+R I ++DSVV S +RRSRG+ P L +P + P L +G +LK Sbjct: 360 LMHDRPIHIPVEDSVVVPSAHGIVPIRRSRGFAPLPLTIPTFAEAGQPALSTLAVGGELK 419 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462 NTF L + A +S H+GD+ Q + A+ M ++ P +V D HP Y ++ W Sbjct: 420 NTFTLAHEDYAHISSHIGDMGSWPSQQAFHRAVDQMLSMQRTRPDLLVCDLHPSYATTAW 479 Query: 463 AREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 A+ ++P V HH AHA A LAEH+ G + L DG G G + +WGGE L Sbjct: 480 AQRYSESNDIPLVQVQHHEAHAMALLAEHR--ACGTPAVILAADGTGYGHDNTIWGGELL 537 Query: 519 RVNYR-ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ---NYSETASVQQQN 574 + E +P L GGD A + PWR + +W S + Sbjct: 538 SYHPDTGFERTWHVPTFELVGGDRAVQHPWRIAAGIAHAWGLDWDCGKESSILSHTSAAE 597 Query: 575 WSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH 634 ++ + G SS GR FDA AA +G P S+E E+A EA A +C Sbjct: 598 IELVESQLSSGFGVVRTSSLGRVFDAAAAIVGIHP--PSFEAESAMLFEAAARNCEKRES 655 Query: 635 PVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 T + + L + P W FH A+AQ + E A G++T Sbjct: 656 EAT--------SFPEAFAELLETRNP-----WTFHHAVAQILQHHIDEAA--VGMST-GL 699 Query: 695 SGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 +GG N+LL + L + Q +P DGGLSLGQ V+ Sbjct: 700 TGGCALNQLLSSMLRVD------MRHQIVPPNDGGLSLGQAVLGRW 739 >UniRef50_C7MLP5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Coriobacteriaceae RepID=C7MLP5_CRYCD Length = 848 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 286/852 (33%), Positives = 389/852 (45%), Gaps = 124/852 (14%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 + + + + G VQGVGFRPFV++LA++ +L G V N DGV + D + F + + Sbjct: 2 TEALNIHVTGIVQGVGFRPFVYRLARKHHLCGWVLNGVDGVRIHAEGSQSDLDHFALAIA 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIR--QSTGGTMNTQIVPDAATCPACLAEMNTPG 120 P A+++ V +P + F IR T T T + PD ATC CL E+ P Sbjct: 62 DEAPAAAKVERVLLDPAS-VESFETFEIRFSDDTDTTSTTLVSPDLATCDDCLYELFDPA 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA 180 +RR+ YPFINCT+CGPRFTI R +PYDR T M F +CP C EY DP DRRFHAQP A Sbjct: 121 DRRFHYPFINCTNCGPRFTITRELPYDRANTSMGPFKMCPDCAAEYADPADRRFHAQPDA 180 Query: 181 CPECGPHLEWVSH----------------------------------GEHAEQEAALQAA 206 C ECGPH+ W + +A + A Sbjct: 181 CFECGPHISWWVSPSATDRVAGMLANQESWASDASDWAPTYDQRKIGRNQVQSDAIIAAC 240 Query: 207 IAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLP----- 261 IA L G IVAIKG+GGFHLACDA N A+A LR RK RP KPLA M+ D Sbjct: 241 IAVLTAGGIVAIKGLGGFHLACDATNEQAIAELRRRKRRPGKPLACMVATLDKARALCQT 300 Query: 262 -DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 LL++PA PIVL+ K+ ++ L+E+G+MLPA PLQHL+L+ LVM Sbjct: 301 TQEEEALLSSPARPIVLLRKRSDVSFATGLSDGLSEMGLMLPATPLQHLILRAFGGMLVM 360 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES--------GEMLR 372 TSGN+ +P + +A L +AD F+ ++R I++R DDSVVR + +M+R Sbjct: 361 TSGNVHDEPIQTDDARAAHVLADVADAFVGNDRPILERYDDSVVRVAFIDADDSIVQMIR 420 Query: 373 RSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWR 432 R+RG+ P + LP + V G + KNT L R +A +SQH+GD+ + W Sbjct: 421 RARGFAPQPVPLPKDTPD-ECVFATGPEQKNTLALTRPGEAFVSQHIGDMENAQTNDAWL 479 Query: 433 EALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLD 492 EA + ++ TP V+ D HP Y++S+WA +LP V HHHAH A+ LAE+ Sbjct: 480 EAAAAFKRLFHLTPSRVICDMHPEYLTSKWALAQDLPVVRVQHHHAHIASVLAENALE-- 537 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 G + DG G G +GA+WGGE L + E LP G A P R Sbjct: 538 -GPALGFAFDGTGYGVDGAIWGGEVLLADLSSFERFANFSYFPLPSGAGAITHPPRCAYG 596 Query: 553 QCLRF-VPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPAT 611 F + + + S + + A+ I+RG+N P SS GR FDA +A LG Sbjct: 597 VLWAFDLLDHPGAASALSALGETADLCAQMIDRGVNCPQTSSVGRLFDAASALLGLCTEA 656 Query: 612 LSYEGEAACALEALAAS-CHGVTHPVTMPRVDNQLDLATF--------WQQWLNWQAPVN 662 YEGE AC LEA + R + D ++ A + Sbjct: 657 R-YEGEGACLLEAAIDYSADDAVVDSVVRRAASNCDTPDLDSAHANAVVNSAVDSTAEAD 715 Query: 663 QRAWAFHDALAQGFAALMREQATM------------------------------------ 686 + A H EQ+T Sbjct: 716 KSAIT-HRYRVDIVKNAATEQSTAQDTAVLLLDAAPLFRALLDDKQAQVATGVIARRFHD 774 Query: 687 ----------------RGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDG 728 G+ SGGV NR L + L A + + + LP DG Sbjct: 775 AIVRAIVQMAQLGEALYGVRQTALSGGVFMNRYLLEQTVSALSAAGYAVALNRDLPPNDG 834 Query: 729 GLSLGQGVIAAA 740 +S GQ V+ Sbjct: 835 CISYGQAVVGLH 846 >UniRef50_UPI0001C4296C [NiFe] hydrogenase maturation protein HypF n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4296C Length = 779 Score = 831 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 263/781 (33%), Positives = 413/781 (52%), Gaps = 45/781 (5%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQ 60 T V++++ G+VQGVGFRP+V+ LA++ L+G + N+ D V + + + E FL Sbjct: 8 KTYKAVKIKVGGRVQGVGFRPYVFSLAKRWQLNGTIQNNSDKVIIHVEGEEYSIEHFLHH 67 Query: 61 LYQHCPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTP 119 L + P LA+I ++E +P ++ + +F+I +S G+ I D+A C CL E+N P Sbjct: 68 LKESPPLLAKITNLEHQPTVY-KSYQQFSILESDLTGSPLPAISADSAVCQDCLNELNDP 126 Query: 120 GERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV 179 RRY YPFINCT CGPR+TI+ +PYDR T M +F +C C +EY DP++RR HAQP Sbjct: 127 SNRRYHYPFINCTQCGPRYTILEKLPYDRKHTTMHSFMMCEDCLEEYGDPMNRRHHAQPT 186 Query: 180 ACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVA 237 C +CGP L V+ AE E+A++ I L G+I++IKG+GG+HLACD + A+ Sbjct: 187 CCAKCGPSLSLVNQKREVIAEGESAIRGTIDALTEGRIISIKGLGGYHLACDMKQPYAIT 246 Query: 238 TLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIA 291 LR K RP +PLAVM+ + + +LLT+P PIV++ +K L +++A Sbjct: 247 HLREIKSRPTRPLAVMMRSLEIVKQYCHVSLKEEELLTSPIMPIVVLKQKINRSLPNELA 306 Query: 292 PDLNEVGVMLPANPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P L +GVMLP PL +LL + +V+TS N SG P ++ G+++ L Sbjct: 307 PGLTTLGVMLPYTPLHYLLFKLGGLEGIVLTSANSSGLPIKYHDKDLFEK-GGLSEFSLT 365 Query: 351 HNRDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 HNR I +DDSVV +G LR++RG+VP+ + ++ LG KNTF + Sbjct: 366 HNRVIKNPLDDSVVEVNGLDETYLRKARGFVPEPIKTTIDTSG---IVALGGQQKNTFSI 422 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 GE ++S H+G++ ++ + + + + + + I + +V D H GY ++ A++++ Sbjct: 423 GIGEHILMSPHIGEVDNEEMLDHFIQQIGVYKRIVNIDMDHVAIDKHLGYSVNKLAKDLS 482 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 TV HHHAH AC+ ++ + + LDG G GE+G +WG E L + + Sbjct: 483 PNVVTVGHHHAHHVACMEDNGV---VDPCVGIILDGTGYGEDGHIWGFEFLYGDAAAYKR 539 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLA-QCLRFVPEWQNYSETASVQQQ-NWSVLARAIERG 585 L + LPGG++A K+PWR + E Q +E ++ S+L + ++ Sbjct: 540 LAHMCYCPLPGGEMAVKEPWRTASGMILHHWPKEGQEMAERLFPDKKAEISILKKMVKLK 599 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL-----EAL--AASCHGVTHPVTM 638 IN+P+A +CGR FD V+A LG + SYEGEAA L E A S V Sbjct: 600 INSPMAGTCGRLFDTVSAILGVCLKS-SYEGEAAIKLAGYMNENYLNARSIEKVAQSYPF 658 Query: 639 PRVDN-----QLDLATFWQQWLNWQA--PVNQRAWAFHDALAQGFAALMREQATMRGI-- 689 + + QLD + Q + + + + + FH + ++ + Sbjct: 659 KIIQSAKGPFQLDFSPMISQIIQEKEQLQLEEIIYKFHQTVVLSCVEMILALYKEKAWLP 718 Query: 690 TTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 +V SGG N L L++ L F + Q +P DGGLS GQ +IAA + ++ Sbjct: 719 KRIVLSGGSFQNGYLSRELSNSLKQKGFKVYAHQQIPCHDGGLSFGQLIIAAHKVKNEKL 778 Query: 748 Q 748 + Sbjct: 779 K 779 >UniRef50_UPI0001C31A6B (NiFe) hydrogenase maturation protein HypF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A6B Length = 818 Score = 828 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 303/809 (37%), Positives = 405/809 (50%), Gaps = 91/809 (11%) Query: 12 RIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPL 68 R+ G VQGVGFRP+V++LA++L L G V ND GV + + FL L + PPL Sbjct: 2 RVEGVVQGVGFRPYVFRLAEELGLAGFVLNDVHGVLAEVEGEDAAVARFLALLPERAPPL 61 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQS-TGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 AR++ V F I +S GGT + ++ PD ATC CLAE++ P +RR+RYP Sbjct: 62 ARVEGVAVRDLDPVGDGGAFAIVESVAGGTPDARVSPDTATCDDCLAELSDPADRRFRYP 121 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F+NCT+CGPRFTI+R +PYDRP T MA+F +C AC EY DP DRRFHAQP ACP CGP Sbjct: 122 FLNCTNCGPRFTIVRGVPYDRPATTMASFAMCAACRAEYDDPRDRRFHAQPNACPACGPR 181 Query: 188 LEWVSHGEHAEQE-----AALQAA------------IAQLKMGKIVAIKGIGGFHLACDA 230 + + A+ A A+L G+IVA+KG+GG+HLAC A Sbjct: 182 ARLLDAEGREIADAPASPDAVGPADAPAFPDAVAAAAAELLAGRIVAVKGVGGYHLACRA 241 Query: 231 RNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVL-----VD 279 VA LRARK R +P A+M+ L +A +LL + A PIVL Sbjct: 242 DEERVVAALRARKRREQRPFALMVASVAAARALVELGEAEERLLCSRARPIVLAARRADG 301 Query: 280 KKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQAL 338 + D +AP E+G+MLP PL LLL + PLVMTSGN+S +P A + +AL Sbjct: 302 GAAGARVADAVAPGAPELGLMLPYTPLHQLLLTDAGGVPLVMTSGNVSDEPIAFDDAEAL 361 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVRES-------GEMLRRSRGYVPDALALPPGFKNV 391 L IAD L+H+R I R DDSV+R LRRSRG+VPD + Sbjct: 362 RRLGAIADLLLVHDRPIATRTDDSVMRVVEVAGARRPLPLRRSRGFVPDGI--ALPLTAT 419 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P+L GA+LK+TFCL +G A + H+GDL + + +R+ + + ++ TPQ V H Sbjct: 420 RPILACGAELKSTFCLAKGTTAWVGHHIGDLQNYATERSFRDGIAHFERLFAVTPQLVAH 479 Query: 452 DAHPGYVSSQWA-REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENG 510 D HP Y S+ +A + T V HHHAH AACLAEH + G + DG G+G +G Sbjct: 480 DLHPDYRSTAYALEREGVETVAVQHHHAHLAACLAEHG---ETGTAVGAIYDGTGLGTDG 536 Query: 511 ALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA-- 568 +WGGE L + +G LP V+LPGGD AA++PWR A + + + Sbjct: 537 TVWGGELLLGDLTGFARVGSLPPVSLPGGDRAAREPWRMACAWLIAAREDAAPPAAAPPA 596 Query: 569 --------------------------------SVQQQNWSVLARAIERGINAPLASSCGR 596 + + W+ +AR G +P +S GR Sbjct: 597 AAPPAAAPPAAAPPAAAPPAAAPPPIPPALAGRIAPERWAAIARMAASGFASPPTTSMGR 656 Query: 597 FFDAVAAALGCAPA-TLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQW- 654 FDAVAA G A +YEG+AA LEA+A + + + + Sbjct: 657 LFDAVAALCGMRAAVAATYEGQAAIELEAIADRAERGAYELPLAPAPPGAPPLLLYAHVT 716 Query: 655 -------LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 L + FH ALA A + A+ G +V SGGV NRLL Sbjct: 717 IRQVVADLAAGTQTGVVSARFHRALATATATACAQVASDAGTDLVVLSGGVFQNRLLLEE 776 Query: 708 LAHYL--ADFTLLFPQSLPAGDGGLSLGQ 734 A L A +L P LP DGG+S GQ Sbjct: 777 TAARLQAAGLHVLVPLQLPPNDGGISYGQ 805 >UniRef50_A6C225 Hydrogenase maturation protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C225_9PLAN Length = 765 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 249/762 (32%), Positives = 367/762 (48%), Gaps = 33/762 (4%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFL 58 + +++ + G+VQG+G RP V + A++L L G +CN +G+E+++ E F Sbjct: 9 STERKIAIRITLSGRVQGIGLRPAVARRARELRLAGSICNTTEGIELQIEGPEKVVEEFE 68 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNT 118 L + P I RE I + T G + ++ D A C CLAE+ Sbjct: 69 RDLENYLPDETIIHQKTRETTKNCGSERFDIIEKQTSGPLAARVPADIAVCQDCLAELAD 128 Query: 119 PGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQP 178 P + R+ Y F++CT CGPR++++ +MPY+R T M+ + LC C +EY P+D RFHAQ Sbjct: 129 PADHRFGYAFLSCTRCGPRYSLLHSMPYERGQTGMSKYDLCSHCQREYDSPVDCRFHAQT 188 Query: 179 VACPECGPHLEWVSHGEHAEQEA--ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 +ACP+CGP + S A+Q+A L+ G IV +KG+GG+ L DA + AV Sbjct: 189 IACPQCGPRVWCTSTTGETNDSDTEAIQSAARALQQGAIVGLKGLGGYQLLVDATSEAAV 248 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDI 290 LR +K R KPLAVM+ + DA + L +PAAPIVL+ + ++ Sbjct: 249 QMLREKKQRLGKPLAVMVTDLIAARKLAMMNDAEAETLASPAAPIVLLQAHENSPIAGNV 308 Query: 291 APDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLI 350 P LN VGVMLP PL LLLQ+ PLV+TS N G+P + + +AD +L Sbjct: 309 NPGLNTVGVMLPTTPLHWLLLQQCDFPLVVTSANREGEPLFYQDRSHSEKINTLADCWLE 368 Query: 351 HNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL 407 H+R I + +DDSVVR +R +RG P +L L P + LG K L Sbjct: 369 HDRPIERPIDDSVVRWMAGRLVTIRLARGLAPLSLDLEHP----QPAIALGGHQKAAVAL 424 Query: 408 VRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN 467 G Q+VL+ H+GDL + ++ E L +Q +Y + + D HP Y +S A + Sbjct: 425 NNGAQSVLAPHIGDLESLAVCERYEEQLESLQQLYAVSQADYICDEHPDYFTSNRASQPV 484 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 + V HHHAH A + E W V+ + DG G G++ +WGGE L + Sbjct: 485 SRVERVQHHHAHIVAGMLEQGW--LDRQVLGVAFDGTGRGDDQTIWGGEFLLSTAAQYTR 542 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 +G L LPGG+ A ++P+R ++ + ++ + + + I+ Sbjct: 543 VGHLKPFLLPGGEAAVREPYRVAVSLMTETLGSEAAL--NTGIKTELVRPVLQIIKSKRL 600 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPR-VDNQLD 646 +P SS GR FD VAA + YEG+AA LEA ++ + + + QLD Sbjct: 601 SPRTSSVGRLFDGVAALV-LGVTHSEYEGQAAMLLEASCDLAEAGSYEMPLSQGAPFQLD 659 Query: 647 LATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 L A FH LA+G A L R+ + +V GGV NR Sbjct: 660 WRPCIAAILRDRKAGVSTGVMAMRFHRGLARGTARLCRQFMPLS----VVLGGGVFQNRC 715 Query: 704 LRARLAHYLADFT--LLFPQSLPAGDGGLSLGQGVIAAARWL 743 L LA L L P +P DGGL+ GQ +A R Sbjct: 716 LVELLAEELRQNDQPLGLPGRIPPNDGGLAAGQLAVAIVRSK 757 >UniRef50_P40596 Carbamoyltransferase hypF n=2 Tax=Azotobacter vinelandii RepID=HYPF_AZOVI Length = 776 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 306/771 (39%), Positives = 392/771 (50%), Gaps = 45/771 (5%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---F 57 M + GV+L +RG+VQGVG RP V +LA L L G+V N G GV + L P+ F Sbjct: 1 MNQPAEAGVRLLLRGRVQGVGMRPCVHRLATSLGLAGEVRNTGAGVRIDLLGPPQALAEF 60 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEM 116 +L PPLAR+D+++REP F I S P DAA CPACL E+ Sbjct: 61 ERRLPDELPPLARLDAIQREPLPAGTRFAGFAIAASRDERRGALAPPPDAAVCPACLEEL 120 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 P +RR+R+PFINCTHCGPR+++IR +PYDR T +A F LCP C +EY DP DRRFHA Sbjct: 121 FDPHDRRWRHPFINCTHCGPRYSLIRRLPYDRVQTSLAGFELCPECRREYEDPADRRFHA 180 Query: 177 QPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 QP+ACP CGP L ++ A+A L G+I+A++G+GGFHLACDARN+ AV Sbjct: 181 QPIACPACGPRLCCEDASGRRLSGDPIERALAALARGEILALRGVGGFHLACDARNAGAV 240 Query: 237 ATLRARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKY--VPELCD 288 A LR RK RPAKP A+M L + L+ PAAP+VL+ K+ L Sbjct: 241 AELRRRKRRPAKPFALMAANPASLQALVELNENGLAELSGPAAPVVLLRKRPAADDLLAA 300 Query: 289 DIAPDLNEVGVMLPANPLQHLLL-QELQCP-------------LVMTSGNLSGKPPAISN 334 +APDL +G MLP +PL LL + P LVMTS NLSG PP N Sbjct: 301 GVAPDLAWLGAMLPHSPLHWLLFHEAAGRPAGTGWAAAPQDLLLVMTSANLSGAPPITGN 360 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNV 391 +A L GIAD +L+H+R+I+ R DDSVV G ++R RG P + L G Sbjct: 361 AEARERLAGIADLWLLHDREILNRCDDSVVSALGRAPLVIRSGRGLAPLEIPLARG---G 417 Query: 392 PPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVH 451 P +L LG LKN CL RG++A LS H GDL D + + + P+ V Sbjct: 418 PSILALGGQLKNAVCLTRGDRAWLSPHNGDLDDADTCRALERTVARLGELLGIRPERVAC 477 Query: 452 DAHPGYVSSQ----WAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 D HP + +S+ +A LP + HHHAH AA +AEH V+ L LDG G+G Sbjct: 478 DLHPDFFASRFARDYAERHGLPLHPIQHHHAHIAATMAEHGL---AEPVLGLALDGFGLG 534 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 +G L GGE LRV C LG L + LPGGD A+++PWR + T Sbjct: 535 ADGRLRGGELLRVAADGCAWLGELNPLPLPGGDQASREPWRMAAGALHALGRGGE--IAT 592 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 + + +AR +ERG N P +SS GR FDA AA L YE EAA LE+ Sbjct: 593 RFAAEPGNAAIARMLERGFNCPPSSSAGRLFDA-AAGLLGLGGRQRYEAEAALRLESRVV 651 Query: 628 SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 P D+ L A FH L + A A Sbjct: 652 GLPERV-PALWRIDDDNRLDLLPLLARLADMRDTRAGAELFHGVLIEALAIWAARAAEAT 710 Query: 688 GITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 G+ + GG N +LR L L A T L + P DGGL+LGQ Sbjct: 711 GLHRVALGGGCFLNTVLRDGLCARLRAAGLTPLLARRAPLNDGGLALGQAW 761 >UniRef50_A9KS78 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS78_CLOPH Length = 792 Score = 817 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 240/803 (29%), Positives = 347/803 (43%), Gaps = 87/803 (10%) Query: 16 KVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF---LVQLYQHCPPLARID 72 VQGVGFRP V+ +A++ ++ G V N G VE+ F + +L + I Sbjct: 1 MVQGVGFRPLVYYIAKKHHIKGYVRNVGGYVEIMAVSSAADFLYFITELQMDHGNGSEIV 60 Query: 73 SVEREPFIW---------------------SQLPTEFTIRQSTGGTMNTQIVPDAATCPA 111 ++ E ++ +F I S + + PD CP Sbjct: 61 KLDIETLSANVESVNNVSMENESMENVSHTTEAYEDFVIIHSESSEEISILPPDLPVCPN 120 Query: 112 CLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD 171 C E+N P +RY PFI+C CGPR+TII +PYDR T M + LC C +EY P Sbjct: 121 CQRELNDPANKRYHNPFISCVACGPRYTIIEELPYDRDNTTMVDYRLCEDCYEEYTSPDS 180 Query: 172 RRFHAQPVACPECGPHLEWVSHGEHAEQEA-----------------------------A 202 RR HAQ ++C +CGP+L + + Q+ A Sbjct: 181 RRHHAQTISCNDCGPYLILQDNTDLILQDNTDLNKNNKHILKDSLGPIAEDNHRLINQQA 240 Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGL-- 260 L A +K G I+A+KGIGG+H C AV LR K R KP AVM D + Sbjct: 241 LHQAAEIIKSGGILAVKGIGGYHFVCSPFKEEAVVNLRRLKGREEKPFAVMFETIDSIRE 300 Query: 261 ----PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQC 316 + +LL T A PIVL+ + G LP PLQ LL ++ Sbjct: 301 YCNVSEEEEKLLMTKARPIVLLYMHRD-VMAPSTNKGSIYCGTFLPYTPLQILLTRDCG- 358 Query: 317 PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSV---VRESGEMLRR 373 PL+MTSGN+SG P +E+ L+ G L + R IV+ +DDSV + +++RR Sbjct: 359 PLIMTSGNISGSPIIREDEKMLSLRSPYLQGVLYNTRRIVRSVDDSVAKIIDHKPQLIRR 418 Query: 374 SRGYVPDALALP-PGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWR 432 SRG+VP + LP K P + G DLK +CL + AV+SQ+ GDL ++ + ++ Sbjct: 419 SRGFVPYPVFLPLEEKKASPVIFAAGGDLKAAYCLYKKGAAVVSQYFGDLEEESVLKEYI 478 Query: 433 EALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLD 492 + + + P V D HP Y S+ +A + LP V HHHAH A+ +AEH Sbjct: 479 HSREDVSGLLKMKPTLAVCDMHPNYHSAHYAEALGLPLFKVQHHHAHIASVMAEHGL--- 535 Query: 493 GGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLA 552 VI + DG G G +G +WGGE L + L + GGD + K + Sbjct: 536 NDKVIGIAFDGTGYGTDGNIWGGEFLVCEGAQFTRAAHLSYTQVLGGDQSMKDARKTATC 595 Query: 553 QCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATL 612 L+ E + + V+ A+E +N L SS GR FDAVA+ L Sbjct: 596 YLLKSGLEG-------YITDERTEVIRAALEHKVNTVLTSSMGRLFDAVASLLDIGQVNR 648 Query: 613 SYEGEAACALEALAA-------SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQ--APVNQ 663 YEGE A LE A +T +T ++D + + Sbjct: 649 -YEGECAANLEREAVLAIRENIKGTELTFAITPKGEIIEVDSDPLLRAICEQKAVTDARA 707 Query: 664 RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQ 721 A FH A+A + + SGGV N +L + L FT+ + Sbjct: 708 LALGFHYAVADMILNVCLRLRERYHTDRIAISGGVFQNSVLTEQTCRLLRENGFTVYYNL 767 Query: 722 SLPAGDGGLSLGQGVIAAARWLA 744 ++P DG +SLGQ + ++ Sbjct: 768 AVPPNDGCISLGQTYVGLMQYQD 790 >UniRef50_A2STT5 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Methanomicrobiales RepID=A2STT5_METLZ Length = 742 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 243/759 (32%), Positives = 359/759 (47%), Gaps = 42/759 (5%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP-ETFLVQLYQHCPPL 68 ++ +RG VQGVGFRPFV+ AQ+ + G V N G VE+ + + F ++ P + Sbjct: 5 KIILRGIVQGVGFRPFVYAQAQRFGIKGTVINHGSEVEIDAAGEEFDAFCREIR-KGPKM 63 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPF 128 + IDSV EP P +FTI +S G + D ATC CL ++ P R + Y Sbjct: 64 SVIDSVSVEPLHDWNPPADFTILKSQDGARTGFVPADIATCEHCLHDIMDPNSRYFGYWA 123 Query: 129 INCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHL 188 +CT CGPR++II+++PYDR T M FP CP C K+Y +P +RR HAQ + C ECGP L Sbjct: 124 TSCTDCGPRYSIIKSVPYDRERTSMDEFPACPDCLKDYENPGNRRHHAQTITCRECGPKL 183 Query: 189 EWVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 + GE+ E + AA L G IVA++G+GGFH+ C L+ RP Sbjct: 184 SLLKGTGENIEGADPISAAAELLDAGNIVAVRGVGGFHICCV---EKTAERLKQNLGRPN 240 Query: 248 KPLAVMLP------VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 + LAVM+ LL P PI+++DK L+ +GVML Sbjct: 241 QSLAVMMKPETMRDFVVEPTKEEWDLLKGPVHPIMILDKIDPE--SHRALSQLHNLGVML 298 Query: 302 PANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P L HLL +L+ P L+MTS N G P + + + + D L H+R+IV R D Sbjct: 299 PYTGLHHLLFAKLKSPLLIMTSANAPGTPMITETKIIIEKMGRVVDYILTHDREIVNRCD 358 Query: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG 420 DSVVR+ G ++R SRG+ P + G +L +G +L + +G + S H+G Sbjct: 359 DSVVRD-GYLIRMSRGFAPLRTRMDLG---DRQILGVGPELNANATIYKGGFLITSPHIG 414 Query: 421 DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQTVLHH 476 ++ + E + + ++ P+ + HD HP ++S++ A V HH Sbjct: 415 NIRNPPTVAYLEETIEKLTSLTGSMPKIIAHDLHPQFLSTRVAQELAERYGATLCPVQHH 474 Query: 477 HAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECEHLGGLPAVA 535 AH A+ E +V+ + +DG+G GE+ +WGGE L + G L V Sbjct: 475 CAHIASVTTE--------EVVGIAIDGVGYGEDATIWGGEILAGSPGNGYMRTGHLEPVL 526 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 +PGGDLA K P R L + + + +LA+ E+ N P+ +S G Sbjct: 527 MPGGDLATKFPERMLYGIL--PTKDTLSLLQNRGWNDTALRILAQQTEKRFNTPVTTSTG 584 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQ- 652 R DA AA LG +Y+GE + LEA AA +++ + L ++ + Sbjct: 585 RVLDAAAALLGICRER-TYDGEPSMMLEAYAARGVAQPMEISIESREGRDVLLTSSILRE 643 Query: 653 --QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 + L+ V A + LA+G A GI T SGGV NR +R + Sbjct: 644 GMEMLSDGISVEDIAASIQTTLAKGIADTALAGIEKTGIHTAALSGGVAINRSIRETIIE 703 Query: 711 YLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEV 747 L + + L P GDG +S GQ V A G + Sbjct: 704 TLKEAGVACLTNPRYPFGDGCISCGQVVTAGILAKEGRI 742 >UniRef50_B8GIZ7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GIZ7_METPE Length = 750 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 249/763 (32%), Positives = 366/763 (47%), Gaps = 52/763 (6%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQHCPPLA 69 +R+RG VQGVGFRP+V+ A LN+ G V N G VE+ D + F+ + H P A Sbjct: 8 IRVRGIVQGVGFRPYVYAAAVALNIRGTVKNIGSEVEILAIGDHFDQFVAAIR-HGPTRA 66 Query: 70 RIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFI 129 IDSV P I F+I S+ G + I PD A C CLA++ P R YRY Sbjct: 67 VIDSVTVTPLIGPAPFNNFSILTSSEGARSGMIPPDIAICDECLADITNPESRYYRYWAT 126 Query: 130 NCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLE 189 +C +CGPR++I+ +PYDR T M FP+C C EY +P RR HAQ +ACP CGP + Sbjct: 127 SCVNCGPRYSILDQLPYDRQRTTMDTFPVCEDCRAEYSNPASRRHHAQTIACPTCGPGVR 186 Query: 190 WVS-HGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 +G+ +E + A A+L G+IVA+KGIGGFH+AC A L+ R R + Sbjct: 187 LYDRNGDEIGEEEPIDEAAARLAAGEIVALKGIGGFHIACT---EAAAPQLKERLGRTKQ 243 Query: 249 PLAVML-----PVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPA 303 P AVM+ + + +Q LT PIV++ K+ L +L+ +G MLP Sbjct: 244 PFAVMVTPARADRIAQINEGEQQALTGIEHPIVVLVKRDRNALKGI--SNLHTIGCMLPY 301 Query: 304 NPLQHLLLQELQ----CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 L HLL L LVMTS N+ G P +A+ L G+AD FL H+R IV R Sbjct: 302 TGLHHLLFSALADHATDLLVMTSANMPGYPMITDLSEAVTHLSGVADCFLSHDRRIVNRC 361 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 DDSV+R+ G ++R SRGY P +P G +L +GA+L + R A+ S H+ Sbjct: 362 DDSVIRD-GYLIRLSRGYAPLRTRIPLG---DRCILGVGAELNVNATIYRDGFAITSPHI 417 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLH 475 G++ + + + + + +VHD HP ++S+++A E+ V H Sbjct: 418 GNVRNPKTLQYLEQTIETLGGLLGAEYDLIVHDLHPRFLSTRFAERLGDELGAEVIAVQH 477 Query: 476 HHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVA 535 H AH AA + + +DG+G G++ +WGGE + +G L +V+ Sbjct: 478 HRAHIAA--------TTQEPCVGIAIDGVGYGDDRTIWGGEIFAGETLHLDRVGHLESVS 529 Query: 536 LPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCG 595 +PGGDLA + P R L + + + L + + + IN PL SS G Sbjct: 530 MPGGDLATRFPERMLYGLL--PDDTVLDLLDERGWSEVERRALQQQVAKQINTPLTSSTG 587 Query: 596 RFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN--QLDLATFWQQ 653 R DA+AA LG +Y+GE A LE++AA + + D L ++ Sbjct: 588 RVLDAMAALLGICRER-TYDGEPAMVLESVAAEGTPHSWDLEYRTEDGAEVLSTRALVRK 646 Query: 654 WLNWQAPVN------------QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 N ++ A + LA+G A + A +G++ + SGGV N Sbjct: 647 AFNEYRSLDRPGTRSGQQQRADLAASIQFNLARGIAGMAVRAADEQGLSVVALSGGVAIN 706 Query: 702 RLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARW 742 ++R + + T P GDG +S GQ V + Sbjct: 707 AMIRETIHTIVCKHGLTFRMNDRYPPGDGCVSFGQVVYGGKKM 749 >UniRef50_D1YUL8 Carbamoyltransferase HypF n=2 Tax=Euryarchaeota RepID=D1YUL8_METPS Length = 747 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 251/757 (33%), Positives = 370/757 (48%), Gaps = 42/757 (5%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLY 62 V++ RG VQGVGFRPFV LA +L G V N G VEV D + F+ + Sbjct: 1 MKKVRILARGIVQGVGFRPFVHNLAVAHSLSGHVKNLGTSVEVVAEGKDADVDAFVEGMR 60 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGER 122 P L+RIDS++ +S +F I +S+ I PD C CL +M R Sbjct: 61 -RGPKLSRIDSLDVSEEPYSGDYRDFRIEKSSASGFGGFIPPDTGICNNCLEDMRG-ESR 118 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 Y +C CGPR+ I+ +PYDR T M FP C C ++Y+DP +RR+HAQ +CP Sbjct: 119 FKDYWAASCVDCGPRYAIMDTLPYDRDNTTMTDFPFCEDCLRDYKDPKNRRYHAQGFSCP 178 Query: 183 ECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 +CGP L ++ I L G+I+AIKG+GGFHL C + LR R Sbjct: 179 KCGPRLYLYGEDRKPLAP-PVEETIRLLNEGRILAIKGVGGFHLCCKM---DVTPLLRQR 234 Query: 243 KHRPAKPLAVMLP-----VADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 ++RP +P A+M P + + R LL + PIVL+ +K + + +AP L+ V Sbjct: 235 RNRPEQPFALMAPLPVIEKYAHVNEGERGLLDSMQRPIVLLRRK--HGVPESVAPGLHTV 292 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 G M P HLL +++ PL+MTS NL +P NE+A L+GIAD +L+H+R I+ Sbjct: 293 GFMTPYTGFHHLLFKDIGEPLIMTSANLPSEPMVKDNEEAFRRLKGIADYYLLHDRRILN 352 Query: 358 RMDDSVVRESGEML--RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVL 415 R DDSV+R + M R +RGY P P + +L +G +L ++ + + Sbjct: 353 RCDDSVLRYNDGMFFTRMARGYAPAMF--PMKKSSPKAILAMGPELNSSVSIYKDNLCYT 410 Query: 416 SQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMNLPTQ 471 S HLG +++ RE + + + TP+ VV D HP ++SS+ A++ Sbjct: 411 SHHLGHINNPLALDFLRETVDRLLKMTKVTPEIVVTDMHPSFLSSRLGRELAQQFKADVV 470 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGL 531 TV HH AH + + E ++ DV+ + +DG+G GE+G +WGGE GL Sbjct: 471 TVQHHRAHIGSLVVE---GVELEDVVGVAMDGVGYGEDGTVWGGEIFHGGAH----PAGL 523 Query: 532 PAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETAS-VQQQNWSVLARAIERGINAPL 590 V +PGGDLA K P R + V E + + + V+ + +ER +N Sbjct: 524 LPVPMPGGDLATKFPMRMVAGILYGSVDEGRLLRIMEANMGPTEAQVILKQVERKVNVAY 583 Query: 591 ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH--GVTHPVTMPRVDN--QLD 646 +SS GR D+VAA LG +YEGE A LE+ A V P + R+D +D Sbjct: 584 SSSAGRVLDSVAALLGVCYRR-TYEGEPAMKLESFAFPGDANKVDLPCDIIRMDGRNVVD 642 Query: 647 LATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRL 703 + + + + + A + +LA+ FA A G + SGGV N Sbjct: 643 SRSLLRAVVDAMDEGKNRHDIAASAQVSLARAFAEQACRAAKKSGAPVVGLSGGVAVNAA 702 Query: 704 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 + + Y+ + LP GDGG+S GQ V+A Sbjct: 703 IGRTIEDYVKSEGLKFVTNHKLPCGDGGVSFGQAVLA 739 >UniRef50_C0VXT8 [NiFe] hydrogenase maturation protein HypF n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXT8_9CORY Length = 760 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 267/770 (34%), Positives = 361/770 (46%), Gaps = 71/770 (9%) Query: 1 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETF--- 57 + T +L I G VQGVGFRP Q A+ + G V N GV V + P+ Sbjct: 23 LENMTVVRKRLTIYGVVQGVGFRPHAVQKARLHAVTGWVTNTDAGVIVEAQGAPDEVDRA 82 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLP-TEFTIRQS-TGGTMNTQIVPDAATCPACLAE 115 L + PPLA I + + F++ S GT T + PD C C E Sbjct: 83 LADITTDLPPLAFISYTNVQSITPINGENSSFSVIPSHRDGTAKTLLPPDTTMCEDCRRE 142 Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 + P RRY YPFI CT+CGPR TIIR +PYDRP T MA FPLCP C++EY DP +RR+H Sbjct: 143 FHDPENRRYHYPFITCTNCGPRLTIIRDLPYDRPRTTMAEFPLCPDCEREYTDPDNRRYH 202 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLK--------MGKIVAIKGIGGFHLA 227 AQP++C ECGP + E + + LK G IVA+KGIGGFHL Sbjct: 203 AQPISCYECGPTAWLEYDEPNLAPEKLTRENVETLKEKVSKLFDSGAIVAVKGIGGFHLM 262 Query: 228 CDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELC 287 CDARN V LR RK RP KP AVM+P P A AAPI LV+ P L Sbjct: 263 CDARNEETVEKLRQRKQRPDKPFAVMVPRTSE-PQTA-------AAPIELVNDFDEP-LA 313 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQ----- 342 + P L+ VG+ P +PL L+ PLV TSGNLS +P +N+ A L Sbjct: 314 PSVNPRLSRVGIFSPYSPLHELICDR---PLVATSGNLSSEPLITTNDDARRFLGPAARR 370 Query: 343 GIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLK 402 +AD L+H+R I ++DSVV +RRSRG+ P + LP VL +G D+K Sbjct: 371 PLADALLLHDRPIHLPVEDSVV-LGRLPIRRSRGFAPLPVQLP----GTRRVLAVGGDMK 425 Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS-- 460 NTF L A +S H+G++ + +R +L ++ + P+ +V D HP + ++ Sbjct: 426 NTFTLTTSSFAHVSPHIGEMHSLAARKAFRTSLAQLRALTGADPELIVCDMHPDFATADI 485 Query: 461 --QWAREMNLPTQTVLHHHAHAAACLAEH-------QWPLDGGDVIALT-LDGIGMGENG 510 + A + +P V HHHAHA + LAE+ P +A+ LDG G G + Sbjct: 486 ADELALSLGVPLVAVQHHHAHALSLLAENPALYRADSGPQTPTPTVAVATLDGTGYGTDA 545 Query: 511 ALWGGECLRV--NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA 568 +WGGE L + + LP L GGD A K P R L C + Sbjct: 546 TIWGGEILLLGPDRTTFTRAWHLPTFRLVGGDAAVKSPHRIALGLCRDWGLA-------- 597 Query: 569 SVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAAS 628 + +++R I SS GR FDA A +G ++YEG+AA EALA + Sbjct: 598 --SPAPIPQVELSLDRDIGTVRTSSLGRLFDACAYLIGLVQDHVTYEGQAAMEFEALALT 655 Query: 629 CHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688 T Q+ L + A FH A+ + ++ G Sbjct: 656 NKKQVSTCATT-------PKTAVQELLAD-PNPARAAARFHLAIGRIIG----KELKATG 703 Query: 689 ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 SGG N+LL + + + L+ +P GDGGLSLGQ + Sbjct: 704 ADVFGVSGGCAANQLLVSAIKDEVGTENLITHHIVPPGDGGLSLGQALYG 753 >UniRef50_A8TDR5 (NiFe) hydrogenase maturation protein HypF n=2 Tax=cellular organisms RepID=A8TDR5_METVO Length = 830 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 255/824 (30%), Positives = 398/824 (48%), Gaps = 103/824 (12%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQHCP 66 ++ + G VQGVGFRPFV+ +A++ NL G V N G+ VE+ + D FL+ L + P Sbjct: 4 KIFVSGIVQGVGFRPFVYNIAKKNNLKGYVKNKGNFVEIVVNGNLKDINNFLINLKEEKP 63 Query: 67 PLARIDSVEREPFI---------------WSQLPTEFTIRQSTG--GTMNTQIVPDAATC 109 L++I+ +E E +L EF I S + I PD A C Sbjct: 64 VLSKINKLEIEDIDTNNDLDNDLNNKLDGLEELNKEFHIYSSQNVNNEVAGTIPPDIALC 123 Query: 110 PACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP 169 C+ E+ + RY YPFI C +CGPRFT+I+ +PYDR T M FPLC C+KEY++P Sbjct: 124 DDCIKELKDKKDIRYEYPFIACVNCGPRFTVIKKLPYDRENTSMDKFPLCENCEKEYKNP 183 Query: 170 LDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLA 227 DRRFHAQ C +CGP + + E+E+A++ A+ L+ GKI+AIKGIGG HL Sbjct: 184 NDRRFHAQANCCDKCGPKVFLTDSNGNKLLEKESAIKKAVELLEDGKILAIKGIGGTHLV 243 Query: 228 CDARNSNAVATLRARKHRPAKPLAVM-----LPVADGLPDAARQLLTTPAAPIVLVDKKY 282 CDA N +A+ LR R +RP + A+M P+ + L + PIV + KK Sbjct: 244 CDANNDDAILELRKRLNRPTQAFAIMSTEEKYPLFSKFTKIEEEALNSYRRPIVALKKKE 303 Query: 283 VP---ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALA 339 + ++I+ +L+ VGVMLP + L +LL + VMTS NL G P AI+N++ + Sbjct: 304 NGYNKYISENIS-NLDTVGVMLPYSGLHYLLFGKC-TAYVMTSANLPGLPMAITNDKIIE 361 Query: 340 DLQGIADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKN------ 390 L+ IAD FL+HNRDIV R DDSV++ +LRRSRGY P+ + + Sbjct: 362 SLKDIADYFLLHNRDIVNRCDDSVLKLISNRMMILRRSRGYAPEPIEIDFSKMAEFENKN 421 Query: 391 ------------------------VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 ++ +GA+L + CL +G + ++Q++G+ S Sbjct: 422 KYKNKDENENENKEIINELNNKKIEKNIISVGAELNSVACLTKGNKFYMTQYIGNTSKYE 481 Query: 427 IQMQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWA----REMNLPTQTVLHHHAHAA 481 ++A+ + + + +V D HP + S ++A +E + P + HH AH Sbjct: 482 TYNYLKDAVHNILRLTNTNKLDTIVCDLHPQFNSKKFANELTKEYDAPMFEIQHHAAHVY 541 Query: 482 ACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN-YRECEHLGGLPAVALPGGD 540 + + ++ + I + LDG+G G++G +WGGE L + E +G L GGD Sbjct: 542 SLMGDNGF---FEPNITIALDGLGYGKDGNIWGGELLYCDKNYEIHRIGHLEEQLQLGGD 598 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETAS-------VQQQNWSVLARAIERGINAPLASS 593 L+ K P R L + + + +++ + ++ ++ I+ G+N + +S Sbjct: 599 LSTKYPLRMLFSILSKKMSLDESFEFVKKYIGKYPELTEKELKLIKMQIKSGLNTAITTS 658 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT---------------HPVTM 638 GR D+VAA L +Y+GE + LEA A SC + + Sbjct: 659 TGRVLDSVAALLSVCFKK-TYDGEPSIRLEAFANSCDEKEKKQILEFVENMDNIRYSRLI 717 Query: 639 PRVDNQLDLATFWQQ---WLNWQA-PVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 +N + + L + A+ H LA + A I TL Sbjct: 718 DYENNIIKTSEIVYDCYTLLQNEVFSKKGIAYYAHLVLANCLCIISENSAKKLNINTLGL 777 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGV 736 +GGV +NR++ + L F +L ++P GDGG++ GQ V Sbjct: 778 TGGVSYNRIITEYMVIKLKNKGFNILLHNNVPNGDGGIAFGQSV 821 >UniRef50_D2RDT6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RDT6_ARCPR Length = 753 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 252/774 (32%), Positives = 392/774 (50%), Gaps = 72/774 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ +RG VQGVGFRPFV++LA+ +NL G V N G G VE+ + + + F+ +L + PP Sbjct: 2 YRITVRGIVQGVGFRPFVYRLAKSMNLKGYVKNTGTGCVEIVIDRNVDEFIRRLKEEKPP 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRY 126 +A I VE E +F I +S G + P D A C CL E+ P RRY Y Sbjct: 62 IAEIHEVEVEEIPDLN-FNDFVIEKSGGKKGGLSLPPPDVALCKFCLKELFDPKNRRYLY 120 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PFI+CT CGPRF++ +PYDR T FPLC C KEY + LDRR++AQ +ACP+CGP Sbjct: 121 PFISCTDCGPRFSVAIKLPYDRENTTFNEFPLCDECQKEYWNVLDRRYYAQSIACPKCGP 180 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 E + G + A+ A + G++VAIKGIGG+H+AC + + V LR + RP Sbjct: 181 QYELIYGGRIIKGLDAIIRAAELIDEGRMVAIKGIGGYHIAC-ITDDDVVFKLRDKLGRP 239 Query: 247 AKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P A+M + + + + +T+ PI ++ K+ E +AP LN +GVM Sbjct: 240 QQPFAIMARNLEVVRKVAYVSEDEEREMTSYIRPITVLKKRNPNEFF-AVAPYLNTIGVM 298 Query: 301 LPANPLQHLLLQELQC-PLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP +PL ++L L+ +VMTS N G+P I + +L D +L HN I R+ Sbjct: 299 LPYSPLHYILFNYLKSDFIVMTSANKPGEPMYIDDGVFSLEL----DAYLRHNLKIHNRV 354 Query: 360 DDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSV++ G ++RRSRG+VP + L L +GA+L N+ LV+ +A++S Sbjct: 355 DDSVIKFVGRRRLIIRRSRGFVPKVIELKGCLDG----LAVGAELYNSITLVKDGKAIVS 410 Query: 417 QHLGDLSDDGIQ-MQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQ 471 Q++G+ ++ ++ A+ N D P+Y+ D HP Y ++ +A ++N+P Sbjct: 411 QYIGNTANFKTFNEFFKRAVDFFTNFIDLKPKYIACDLHPLYNTTNFAERLSRKLNIPLY 470 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRE--CEHLG 529 V HH AHA + +AE IA+T+DG+G G +G +WGGE L +++ + +G Sbjct: 471 KVQHHFAHALSVMAERGI----DKAIAITVDGVGYGFDGTIWGGEVLLIDFERGTFKRVG 526 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVP-EWQNYSETASVQQQNWSVLARAIERGINA 588 L L GGDLA K P R L + + + E + +++ + E GI Sbjct: 527 RLERFRLIGGDLATKYPLRVLFSLLYNAKRLDLLDGYEKYLRKGESFEIFESFHETGI-- 584 Query: 589 PLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHP----------VTM 638 +S GR DAV+A L +YEGE A LE++ P + Sbjct: 585 -ATTSMGRVLDAVSAMLKICFER-TYEGEPAMKLESVVEPFECEVKPRIDVVREDSVYSK 642 Query: 639 PRVDNQLDLAT--------------FWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQA 684 P VD + ++ + +++L ++ A+ LA+GFA ++++ Sbjct: 643 PYVDEEFNVKSGDVRVIRISDFIANCMEEYLE-GESKSKIAYKVMKYLAEGFAEIVKDYN 701 Query: 685 TMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIA 738 +V SGGV N + ++ + + + GD G+S GQ I Sbjct: 702 -----YPVVASGGVCFNSYFIPLIEEHV---DVYVNEKVACGDNGISFGQAYIG 747 >UniRef50_B9KGD4 Transcriptional regulatory protein HypF n=16 Tax=Campylobacter RepID=B9KGD4_CAMLR Length = 732 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 237/743 (31%), Positives = 349/743 (46%), Gaps = 36/743 (4%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFLVQLYQH 64 G ++ I+G VQGVGFRPFV+ +A++LNL G+V N+ GV + L + E F +L+ + Sbjct: 5 GYEIHIKGLVQGVGFRPFVFNIAKELNLKGEVYNNSLGVVIILECSNDELEIFKEKLFAN 64 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLARID + EF+I S + I+ D A C C E R+ Sbjct: 65 LPPLARIDDFNFSYKKLQKTYNEFSISTSQDSEKFSPILSDFALCEDCYNEFYDEKNPRF 124 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 +YPFI CT+CGPRF+II+ +PYDR T M F +C C EY DP +RRFHAQP++CP+C Sbjct: 125 KYPFITCTNCGPRFSIIKKLPYDRVNTTMNEFKMCSFCQSEYDDPTNRRFHAQPLSCPKC 184 Query: 185 GPHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 + ++ A+ E A L+ GKI+A KG+GGFHL CD+ N NA+ LR R Sbjct: 185 KITIFLKDKNQNILAKDEKAFILLAKLLEEGKIIAFKGMGGFHLICDSTNKNAINELRIR 244 Query: 243 KHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K+RP KP A+M+ + +A +LLT+ PIV+++ K + +APD N+ Sbjct: 245 KNRPKKPFAIMVKDLKMAQELAFINEAEAKLLTSNLKPIVILNSK---NIHKSLAPDTNK 301 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +G+ML +L + + P++ TS NLS + + L L + D +L ++R I Sbjct: 302 IGIMLAYMGTHLMLFEHFKKPIIATSANLSSQSIIYEETKLLEQLSDVFDFYLDYDRAIY 361 Query: 357 QRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 DDS+ + G LR SRG P + F +L LG++LKN F Q Sbjct: 362 NSSDDSIAQVIGKEVMFLRTSRGLNPLYINTAGIFNAKENILALGSELKNEFACFFKNQI 421 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTV 473 +S ++GD+ IQ ++ + L QN Y ++ D HP + + ++ V Sbjct: 422 FISPYIGDMKSLDIQERFFKILTFFQNSYKLNFDQILSDKHPQFNYVKEFKDY--KNFRV 479 Query: 474 LHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPA 533 HH+AH ACL EH+ DV+A DG G G++G +WGGE R N + E L Sbjct: 480 QHHYAHLCACLFEHKI--YKNDVLAFVFDGTGYGDDGKIWGGEIFRANLKSYERLNHFKN 537 Query: 534 VALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASS 593 L D K LA F E + A Q + L + + + SS Sbjct: 538 FKLINAD--IKNIANLALALIFDFNLESKASEFLAKFSQVKLNNLKKIHTQS--SLYTSS 593 Query: 594 CGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQ 653 GR DA A L YE + +E + + + ++ + Q Sbjct: 594 LGRIIDAFGAFA-FDMQKLDYEAQIGLLMEKYYD--KNLDYNYKFDIYEKEICFKNAFLQ 650 Query: 654 WLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA 713 L + V L G A L+ E + ++ GGV N+ L L Sbjct: 651 ALEDKDKV-----KISTGLLNGIANLIIEYSKDFKEE-VLLCGGVFQNKTLLEILVR--K 702 Query: 714 DFTLLFPQSLPAGDGGLSLGQGV 736 +F P D ++LGQ V Sbjct: 703 NFAYKTSLQFPCNDSSIALGQLV 725 >UniRef50_C8S736 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S736_FERPL Length = 745 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 246/769 (31%), Positives = 381/769 (49%), Gaps = 72/769 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ + G VQGVGFRPFV++LA+++ L G V N GDG VE+ + + E F+ +L + P Sbjct: 2 FRIIVSGVVQGVGFRPFVYRLAKEMKLRGYVKNCGDGTVEIVIDREVEEFVERLKKEIPD 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRY 126 A+I+++ E + +F I +S G T + P D A C CL E+ +RRY Y Sbjct: 62 RAKIENIRIE--KFEGFFDDFKIIESGGKTGILSLPPPDIAVCEDCLKEVFDEKDRRYLY 119 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 PF CT CG RF++ +P+DR T +A FPLC C +EY +P DRRF+AQ +ACP CGP Sbjct: 120 PFTTCTSCGQRFSVSERLPFDRENTTLAEFPLCEDCRREYENPDDRRFYAQSIACPACGP 179 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + E + G A++ A + G VAIKGIGG HL+C N V LR RP Sbjct: 180 NYELLPKG--VFGVEAVKEAARMIDSGSFVAIKGIGGIHLSCLTEN-EIVWKLRKILRRP 236 Query: 247 AKPLAVMLPVADGLPD------AARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 +P AVM+ + + + L + PI++ K+ + +AP L+ +G+M Sbjct: 237 QQPFAVMVRDIEAAKNLAELSEEEIEELKSFRRPILVCKKRVD---LEAVAPKLDTIGIM 293 Query: 301 LPANPLQHLLLQELQ-CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 LP PL ++L + L+ +VMTS N +P A S E+ L+ D FL HN I R+ Sbjct: 294 LPYTPLHYILFKFLKAEAVVMTSANFPSEPMATSFEE----LKVPYDAFLNHNMRIANRV 349 Query: 360 DDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLS 416 DDSVV+ ++RRSRG+VP+ + L + + +GA+L N+ C ++ +AV+S Sbjct: 350 DDSVVKFVNGRRMIIRRSRGFVPEPIELDIKSEA----VAVGAELYNSLCFLKEGKAVMS 405 Query: 417 QHLGDLSDDGIQ-MQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQ 471 Q++G+ ++ ++ AL +N D P++VV D HP Y +S +A + Sbjct: 406 QYIGNTANFKTFNEFFKRALFHFKNYLDLKPEFVVADMHPLYNTSIFAEKFGEEIGAEVL 465 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLG 529 V HH AHA + +AE + + IA+ +DG+G G +G +WGGE L + + E E +G Sbjct: 466 KVQHHFAHAFSVMAEKKI----DEAIAIAVDGVGYGMDGKIWGGEVLYINLDSMEFERVG 521 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASV--QQQNWSVLARAIERGIN 587 L + L GGDLA ++P R L + W+ + +++ +++ I Sbjct: 522 RLETIHLLGGDLAVERPLRVLFSIIYSQTGSWEELKYYEKYLKKGESFETFEELLKKRIG 581 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVD----- 642 ASS GR DA +A L +YEGE A LEA+A P+ + Sbjct: 582 VVEASSAGRVLDAASAMLEICFER-TYEGEPAMKLEAVAEESENYYDPIIETSWEISKFS 640 Query: 643 ------------NQLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMR 687 L + ++ L + A+ LA+G + + E Sbjct: 641 SPFDGRGRRGEVKVLKIGEVFEDALKRYLSGERRGKIAYQIMSYLARGLSEIASEFEA-- 698 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGV 736 L+ SGGV +N + + + + + GD G+SLGQ Sbjct: 699 ---PLIVSGGVAYNSIFQKEI-----GRNFYTNELVACGDNGISLGQVY 739 >UniRef50_C2KSY0 Hydrogenase maturation protein n=2 Tax=Mobiluncus mulieris RepID=C2KSY0_9ACTO Length = 872 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 286/873 (32%), Positives = 385/873 (44%), Gaps = 144/873 (16%) Query: 3 KNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLN--LHGDVCNDGDGVEVRLREDPE---TF 57 NT + + G VQGVGFRP V ++A + L G ND V + + + F Sbjct: 2 DNTVVRRRWILTGIVQGVGFRPHVARVASRFGAGLTGFCGNDSLSVFIEAQGELSVLRAF 61 Query: 58 LVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEM 116 + + PPL+ + + EF I S GG T I PD + C ACLA++ Sbjct: 62 IAAVVDEAPPLSYVMRCQETTIDVVDSENEFRIVASRGGVGARTLIPPDVSLCAACLADI 121 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 PG RRY Y F CT+CGPR +II +PYDRP T M FPLC AC EYRDP DRRFHA Sbjct: 122 RDPGNRRYGYAFTTCTNCGPRLSIIEDLPYDRPQTTMRDFPLCAACAAEYRDPGDRRFHA 181 Query: 177 QPVACPECGPHLEWVSHGE---------------------------HAEQEAALQAAIAQ 209 QP++C +CGPHL V+ E AEQ+A L AA A Sbjct: 182 QPISCYDCGPHLWLVAASELPTGLADPFSSQDLGVDLVDGSRGGRSPAEQDAVLDAAAAD 241 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAA----- 264 L+ GKIVA+KG+GGFHL DA N AV+ LR RKHR KPLAVM+ Sbjct: 242 LRSGKIVAVKGLGGFHLLVDATNETAVSRLRRRKHRDGKPLAVMVADFAAARALVDIDTP 301 Query: 265 ----RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 QLL +PA PIVL + + +AP L+ +GVML PL LLL+ + P+V Sbjct: 302 ENPIAQLLLSPAHPIVLAVRHGA-AIAPSVAPGLDNLGVMLAYTPLHLLLLERVGRPVVA 360 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG------------ 368 TSGNLS +P +N AL L IAD FL+HNR I ++DSV+ + Sbjct: 361 TSGNLSSEPLCYTNADALRRLGSIADTFLLHNRGIAVPVEDSVIMAAPLTLPSSLSLKTA 420 Query: 369 -EMLRRSRGYVPDALALPPGFKNVPP-------------VLCLGADLKNTFCLVRGEQAV 414 +RRSRGYVP LP P +L +G +LKNTF LVR A Sbjct: 421 FLPVRRSRGYVPLPFPLPEKPSRDPASQPCISVNQVNPVILGVGGELKNTFTLVRDGLAF 480 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM-------- 466 S HLGD+ Q+ + +A+ + I+ P V+ D HP Y ++ WA Sbjct: 481 TSAHLGDMGSLASQLAYEKAIGQLTKIHREHPTIVIRDLHPNYATTAWAERYVASARDSG 540 Query: 467 -NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 L + HH AHA + LAE + P I + +DG G G++ +WG E V+ Sbjct: 541 RTLRLLALQHHRAHALSLLAETRVP----RAIVIAVDGTGYGDDAKIWGSEVFLVDTSRV 596 Query: 526 E--------HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 L LP LPG DLA ++PWR +A + Sbjct: 597 AAQGEAGVPRLAHLPYFPLPGADLAVREPWRQAVALLRSLGLSATGLPLESRWCSSLGQT 656 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV----- 632 + ++ G ++P + + GR+FDAVAA LG + S+E A A++ A Sbjct: 657 VLSQVDSG-SSPWSCALGRYFDAVAALLGLCEIS-SHEAAAPVAVQTAARRWQAENPLAA 714 Query: 633 -----THPV-------------------------------------TMPRVDNQLDLATF 650 ++ T+P +L +A Sbjct: 715 AQIVHSYLFQLGSALSDGPVVAQWTASPPPQTGVSCEAAASQSGIGTVPPAARELPMAGI 774 Query: 651 WQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRAR 707 + + + A+ FH +A+ FA A +GG N LL Sbjct: 775 ITELVAGIKAGICPGELAFRFHVVVAKLFATTTCALAAEYECAAAGITGGSALNSLLTEL 834 Query: 708 LAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 738 + + T L Q +PA DGGLSLGQ Sbjct: 835 IGAAVKEHGLTWLTHQRIPANDGGLSLGQAFYG 867 >UniRef50_Q1Z839 Hydrogenase maturation protein HypF n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z839_PHOPR Length = 745 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 259/748 (34%), Positives = 368/748 (49%), Gaps = 50/748 (6%) Query: 35 LHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIR 91 + G V ND +GV++ ++ E F+ L PPL+RID V P Q+ T F I+ Sbjct: 1 MAGSVINDSEGVKIDVQGKLEELDVFISDLTLQAPPLSRIDQVAVWPRPLHQV-TSFCIK 59 Query: 92 QSTGGTMNTQ-IVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPF 150 QS G + + + PD C C A++ R YRYPF NCTHCGPR+TI+ A+PYDR Sbjct: 60 QSKGRALTSVCLSPDQGICKECRADIADSASRYYRYPFTNCTHCGPRYTIVEALPYDRAV 119 Query: 151 TVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH--AEQEAALQAAIA 208 T M +F LC C + Y++PLDRR+HAQP++C CGP + +VS A Q A+ Sbjct: 120 TGMRSFSLCQPCQQAYQNPLDRRYHAQPISCEHCGPSVRYVSGSGKVLAHQALAIDKTAK 179 Query: 209 QLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDA----- 263 L+ G IVAIKG+GGFHLAC+A NS+AV LR K R KP A+M+ + Sbjct: 180 TLQRGGIVAIKGLGGFHLACNASNSDAVTRLRQIKRRQRKPFAIMVADGNAAKQLVWGEA 239 Query: 264 -ARQLLTTPAAPIVLVDKKYVPE--LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVM 320 +L + +PIVL+ KK VP+ L ++AP + +GV+LP PL LLL+ L +V+ Sbjct: 240 KEWDMLHSQPSPIVLMKKKAVPQSYLAANVAPSVPYLGVILPYTPLHVLLLEHLDQAIVL 299 Query: 321 TSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGY 377 TS N SG P A ++ G+ DG L HNR IVQ DDSVV +G +LR +RGY Sbjct: 300 TSANGSGMPIATEYDEVYDQFDGLIDGVLDHNRPIVQACDDSVVHFAGGKRRVLRMARGY 359 Query: 378 VPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRL 437 P G + P+L +GA K L +Q +LS +GD+ D Q ++ + +R Sbjct: 360 APY---SQAGNGSEWPILAMGAQQKAAIGLSLAQQWILSPFIGDIDDLDTQHRYLDVIRH 416 Query: 438 MQNIYDFTPQYVVHDAHPGYVSSQWA------REMNLPTQTVLHHHAHAAACLAEHQWPL 491 +++Y P ++ D HPGYVS+Q+A + V HHHAH A +AEH+ Sbjct: 417 FESLYQVEPTQIICDRHPGYVSTQYAIERQQLASQAITLHQVQHHHAHVLAVMAEHKI-- 474 Query: 492 DGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLL 551 V+ DG G G++G +WGGE L + + E + L L GGD A K P R + Sbjct: 475 -NQTVLGFAFDGTGWGDDGTVWGGEVLLSSSQHFERVFHLRPFRLLGGDRAIKSPARIVF 533 Query: 552 AQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGC 607 A L + + L + G ++P SS GR DA A+ LG Sbjct: 534 AMLLECYSLNDIKRMELAVFKRWSESKMDNLFLLWQSGNSSPYTSSMGRLIDAWASLLGL 593 Query: 608 APATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNW-QAPVNQRAW 666 ++ YEGE LE A + G N +D L+ A + + Sbjct: 594 VD-SVDYEGECGLLLEQAALAATGSVAMEFHLTKTNMIDWQPLLDNALSLIAAAPSDLSS 652 Query: 667 -----------AFH-DALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLAD 714 F L + A ++ A +V SGGV NR+L + L+ Sbjct: 653 DTQSGTWSLLVTFLSRGLFEAIAHNIKMVAATFPAYPVVLSGGVFQNRVLLDLVYQQLST 712 Query: 715 FT--LLFPQSLPAGDGGLSLGQGVIAAA 740 T + +++P DGG++ GQ A Sbjct: 713 LTNSIYCGETVPVNDGGIAAGQLWYATH 740 >UniRef50_Q0RPQ5 Hydrogenase maturation protein hypF n=4 Tax=Actinomycetales RepID=Q0RPQ5_FRAAA Length = 824 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 307/789 (38%), Positives = 389/789 (49%), Gaps = 69/789 (8%) Query: 14 RGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQLYQHCPPLAR 70 G VQGVGFRP V +LA L L G V ND V + DP FL +L PPLAR Sbjct: 26 EGIVQGVGFRPHVHRLASGLGLTGFVGNDSASVFAEVDGDPADVAEFLRRLAPSAPPLAR 85 Query: 71 IDSVEREPFIWSQLPT--EFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRYRYP 127 ID + + P F I S T + PDAA C CL E+ P +RR+R+P Sbjct: 86 IDGITVTDVPGTPRPGGAGFRIVASRAAAGARTLVPPDAAVCADCLRELFDPADRRHRHP 145 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 FI CT+CGPRFTII A+PYDR T MA FP+C C EY DP DRRFHA+P+ACP+CGP Sbjct: 146 FITCTNCGPRFTIIEALPYDRAATTMARFPMCARCTAEYTDPADRRFHAEPIACPDCGPR 205 Query: 188 LEWVSHGEHAE--QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 L + A +AAL AA L G +VA+KG+GG+HLAC A + + LR RK+R Sbjct: 206 LWFSPLDGPAVTGTDAALAAAQRALAAGAVVAVKGVGGYHLACRAEDDEGLTRLRGRKNR 265 Query: 246 PAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P +P AVM + A LL+ PAAPIVL + L +AP VG+ Sbjct: 266 PDQPFAVMARDLATAARVGTVSPAVAALLSGPAAPIVLTGRAPGAPLSALVAPGSPLVGL 325 Query: 300 MLPANPLQHLLL------QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNR 353 +LP PL HLL LVMTS N SG+P + +A L G+AD FL H+R Sbjct: 326 LLPYTPLHHLLFAPAPGGGPPPRLLVMTSANRSGEPICFDDREARTRLAGLADAFLTHDR 385 Query: 354 DIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRG 410 I+ DDSV+R E LRR+RG+VP + LP V PVL +G +LKNT CL G Sbjct: 386 PILAPCDDSVLRCDAEQVVPLRRARGHVPLPVDLPRP---VGPVLAVGGELKNTLCLTTG 442 Query: 411 EQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN--- 467 +A+LSQH GDL + + + +Y P + D HPGY + WAR Sbjct: 443 RRAILSQHHGDLGSLAAMAAFERSGARLARLYGIEPAVLAADPHPGYATRAWARRTAGAE 502 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV--NYREC 525 P + V HHHAH AA LAEH G V+ + DG G G++G +WGGE L V + Sbjct: 503 RPLRLVQHHHAHVAALLAEHG--RLGEPVVGVAFDGTGYGDDGTIWGGEVLLVGSDVTRA 560 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIER 584 E + L V LPGGD A + P R LA W + + + S + A++R Sbjct: 561 ERVAHLRPVGLPGGDAAVRNPCRVALAHLAAAGLAWSADLAPVRACSAAELSTVRTALDR 620 Query: 585 GINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL----------EALAASCHG--- 631 G+ +SS GR FDAVAA LG T +Y +AA L E LAA G Sbjct: 621 GVACTPSSSMGRLFDAVAALLGVRQRT-TYAAQAAVELEALAAEAPTAEGLAAGRSGDTG 679 Query: 632 ----------------VTHPVTMPRVDNQLDLATFWQQW---LNWQAPVNQRAWAFHDAL 672 P+ D L+ A L A AFH A+ Sbjct: 680 GPSAGTAAAGRAAAGVGAWPLVFGLADGVLEPAPVLAGLVDGLRAGMAAGTLAGAFHVAV 739 Query: 673 AQGFAALMREQATMRGITTLVFSGGVIHN--RLLRARLAHYLADFTLLFPQSLPAGDGGL 730 A + G+ + +GGV N L R A F +L Q +PAGDGGL Sbjct: 740 ADAVTRVAEVARRRHGVGLVGLTGGVFANVVLLRACRARLAAAGFDVLVHQEVPAGDGGL 799 Query: 731 SLGQGVIAA 739 +LGQ V+AA Sbjct: 800 ALGQAVVAA 808 >UniRef50_A3DKG9 (NiFe) hydrogenase maturation protein HypF n=2 Tax=Desulfurococcaceae RepID=A3DKG9_STAMF Length = 778 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 247/784 (31%), Positives = 368/784 (46%), Gaps = 52/784 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPET---FLVQL 61 + I G VQGVGFRPF+ +LA + L G V N G VEV + PE+ F+ L Sbjct: 2 VVAKKFIIIGLVQGVGFRPFIHRLAVKHGLKGYVRNIGGSEVEVWVEGSPESIDKFIEDL 61 Query: 62 YQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPG 120 Y PP A I+ V E + +F I +S+ + I PD A C CL E+ P Sbjct: 62 YVEKPPPAIIEDVFIEDVEP-RGYVDFHILKSSREAVKRSNIPPDLAICKDCLREILDPN 120 Query: 121 ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPV 179 +RRYRY F +C CGPRF++I +PYDR T M+ + LC C+KEY D + RR+HAQ + Sbjct: 121 DRRYRYAFNSCAWCGPRFSMIYRVPYDRSNTSMSKYILCSECEKEYHDIRNVRRYHAQGI 180 Query: 180 ACPECGPHLEWVSHG-EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 +C GP L ++ E+ E + + G IV +KG+GG+H+A A + V Sbjct: 181 SCSVDGPKLYLYTNDWEYVETRDPIIETAKLIDEGYIVGVKGLGGYHIAALATSDGVVLK 240 Query: 239 LRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAP 292 LR RKHRP KP A+M + + AR +L +P API+L+ K+ + ++P Sbjct: 241 LRKRKHRPTKPFAIMGLDISVLERLVYIDEEARSILESPQAPILLLPKREDSPVSKYVSP 300 Query: 293 DLNEVGVMLPANPLQHLLL-QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 L+ GV + L +LLL + L+MTSGN++G+P I+ E A L + D FLIH Sbjct: 301 GLSHEGVFVAYTGLHYLLLMETRDKFLIMTSGNVTGEPMCINEECAREKLSRVVDYFLIH 360 Query: 352 NRDIVQRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLV 408 +R+IV R+DDSV+R + LRRSRGY P + + + GADL NT L Sbjct: 361 DREIVNRVDDSVLRNTNGKWVFLRRSRGYAPMWIRIRSDLD--GEYIAFGADLNNTGALG 418 Query: 409 RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ--YVVHDAHPGYVSSQ----W 462 ++ VL+Q++GDL Q + + + Y V+ D HP Y S + + Sbjct: 419 FEDKVVLTQYIGDLDSFNAQRELLKYIGFFIENYRINLDKTIVIVDKHPSYHSRRLGMEF 478 Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRV-- 520 A + LP V HH+AH ++ G+V+ + +DG+G G++ +WGGE L Sbjct: 479 AEKHRLPIIEVQHHYAHVLGTAYDNGLE---GEVLGIAMDGLGWGDDNTIWGGEILVFNT 535 Query: 521 NYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ------- 573 + + + LG + + L D P R L ++ + + Sbjct: 536 DKYDYKRLGHIEKLPLTS-DRDTIYPLRILAGYLSSRGHVFEEIHKLIKNVLENIDHRLV 594 Query: 574 -NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCH-- 630 ++ + ++ G ASS GRF D ++A LG SYEGE A LEA+A Sbjct: 595 AEMELVHKLVKAG-RYIEASSTGRFLDMISAILGVCLYR-SYEGEPAIKLEAVADKAKSH 652 Query: 631 GVTHPVTMPRVDN--QLDLATFWQQWLNWQA---PVNQRAWAFHDALAQGFAALMREQAT 685 + + + L+ + + V + A + + L + Sbjct: 653 KLLEHFHISTHNGLYVLEYKDLIEHLIYNNVRDNSVAETAKSILYSYGYWMGKLAHKLIK 712 Query: 686 MRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 R I +V SGG N + L L D L P+ +P D G+S GQ VIA + Sbjct: 713 GRRIDHIVVSGGAAVNTYIIKGLEDSLGEHDLEPLLPRRIPPNDEGISFGQ-VIAGSLIK 771 Query: 744 AGEV 747 Sbjct: 772 KKNS 775 >UniRef50_O28905 Hydrogenase expression/formation regulatory protein (HypF) n=1 Tax=Archaeoglobus fulgidus RepID=O28905_ARCFU Length = 740 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 267/776 (34%), Positives = 388/776 (50%), Gaps = 76/776 (9%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPETFLVQLYQHCPP 67 ++ +RG VQGVGFRPFV ++A ++ L G V N GDG VE+ + +PE FL L + PP Sbjct: 2 FKITVRGVVQGVGFRPFVHRIASRMGLRGYVRNTGDGSVEIVVDRNPEEFLNILLKERPP 61 Query: 68 LARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYP 127 L I+ T F I +S G ++ + PD A C CL E+ RRY YP Sbjct: 62 LVVIEDFSVAKTNGEIPET-FRIVESGGKSLLSLPPPDVAVCDKCLEEVLDSKNRRYLYP 120 Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187 F +CT CGPRFTI +++P+DR T +A FPLCP C KEY D DRR+ AQ +ACP CGP Sbjct: 121 FTSCTDCGPRFTISKSLPFDRENTSLADFPLCPDCRKEYGDIKDRRYFAQTIACPRCGPQ 180 Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 +V G E + A L GKI+AIKGIGG+H+AC + V LR +RP Sbjct: 181 YRFVWKGG----EGGIGDAANALDSGKIIAIKGIGGYHIACL-TEDDVVLRLRKLLNRPQ 235 Query: 248 KPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 +P AVM+ L + R L +PA PIV+V KK + +AP+L+ +G+ML Sbjct: 236 QPFAVMVRDLSSAERVAELSNEERAELLSPARPIVVVRKKLPF---EAVAPELDTIGIML 292 Query: 302 PANPLQHLLLQELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P PL HLL QEL+ LVMTS NL G+P I E + + DGFL+HN +I R+D Sbjct: 293 PYTPLHHLLFQELKADYLVMTSANLPGEPMYID-ESIMEKM--ELDGFLVHNLEIANRVD 349 Query: 361 DSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 DSVV+ G ++RRSRG+VP + + GF + +GA+L N+ L++ +AV+SQ Sbjct: 350 DSVVKYVGGRRLLIRRSRGFVPQPIKIDIGFNA----IAVGAELYNSIALLKEGKAVVSQ 405 Query: 418 HLGDLSDDGIQ-MQWREALRLMQNIYDF-TPQYVVHDAHPGYVSSQWAR----EMNLPTQ 471 ++G+ ++ ++ A++ + Y++ D HP + ++ +A E++ Sbjct: 406 YIGNTANFRTYNEFFKRAVKFFARYMNLEKIDYIISDMHPLFNTTNFAEKLSKELSCRHI 465 Query: 472 TVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR--ECEHLG 529 V HH AHA + +AE +A+T+DG+G G +G +WGGE L ++ E G Sbjct: 466 KVQHHFAHALSVMAEKGL----ERAVAITVDGVGYGMDGKVWGGEVLLIDLEKGRFERRG 521 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAP 589 L L GGD A +P R ++ R + ++ L +A+ A Sbjct: 522 RLETFGLIGGDAATYRPLRIAVSLLKRHELLEH------YCKYEDVERLIKALP---LAV 572 Query: 590 LASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDN------ 643 +S GRF DAV+A L +YEGE A LEA A P R + Sbjct: 573 KTTSVGRFLDAVSAMLEVCLER-TYEGEPAMKLEAAAEPHEVEVKPEIERRRETCVYNSP 631 Query: 644 -----------QLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGI 689 L L F+ + + + A+ +A+G + + A Sbjct: 632 FDTEGRQGEIKVLMLRDFFTRCMERYLEGEGRGKIAYEAIAYVARGLGEIALDAARNC-- 689 Query: 690 TTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAG 745 ++ SGGV +NR + + + P P GD G+SLGQ A + L G Sbjct: 690 -KILISGGVGYNRYFLREVERVCGEIVV--PSLYPLGDNGISLGQIY--ALKALEG 740 >UniRef50_Q2JE38 (NiFe) hydrogenase maturation protein HypF n=6 Tax=Bacteria RepID=Q2JE38_FRASC Length = 848 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 290/810 (35%), Positives = 382/810 (47%), Gaps = 98/810 (12%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCPPLARIDSVEREP 78 FRP+V +LA L L G V ND V + D FL +L PPLARI+ V Sbjct: 31 FRPYVHRLAGTLGLAGFVGNDSTSVFAEVEGDEVAVAEFLRRLEPQAPPLARIERVTVTS 90 Query: 79 FI-WSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGP 136 + F I + T + D A C CL EM P +RR+R+PFI CT+CGP Sbjct: 91 VTRSTAGDAGFRIVAGATVPGDRTLVPADTAVCADCLREMFDPTDRRHRHPFITCTNCGP 150 Query: 137 RFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH 196 R+TII A+PYDR T MA FP+C C EY DP DRRFHA+PVACP CGP L + Sbjct: 151 RYTIISALPYDRAATTMARFPMCARCAAEYADPADRRFHAEPVACPSCGPKLWFSPADGT 210 Query: 197 AE----QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARN-------SNAVATLRARKHR 245 +AAL AA L G +VA+KG+GG+HLAC A N A+A LRARK R Sbjct: 211 GPEVHGTDAALAAAQRALADGAVVAVKGVGGYHLACSAENDPGDTAGDTALARLRARKDR 270 Query: 246 PAKPLAVMLPVA------DGLPDAARQLLTTPAAPIVLVDKKYV------PELCDDIAPD 293 P KP AVM+ L A LL +PAAPIVLV + + +AP Sbjct: 271 PDKPFAVMVRDLATAALVADLSSAEAALLASPAAPIVLVRRSPAAGMSGISGMSRLVAPG 330 Query: 294 LNEVGVMLPANPLQHLLLQ-------ELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 VG++LP P+ HLL LVMTSGN SG+P +++ A L G+AD Sbjct: 331 TPLVGLLLPYTPVHHLLFAPVPGGGPRPPRMLVMTSGNRSGEPICFADDDARDRLAGLAD 390 Query: 347 GFLIHNRDIVQRMDDSVVRESGE---------MLRRSRGYVPDALALPPGFKNVPPVLCL 397 FL H+R I+ DDSVVR +RRSRGYVP + + V VL + Sbjct: 391 AFLRHDRPILLPCDDSVVRCGYGDDGDDGQVLPVRRSRGYVPLPVD---LGRPVRSVLAV 447 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 G + K+TFCL +A +SQHLGD+ + + + ++Y P+ + D HPGY Sbjct: 448 GGEGKSTFCLTTDRRAFVSQHLGDMGSLAALRAFERSAAHLTDLYGVAPETLAADLHPGY 507 Query: 458 VSSQWAREMNLPTQT----------------------------VLHHHAHAAACLAEHQW 489 V+ WA V HHHAH AA LAEH Sbjct: 508 VTRAWAERAAATGTEQAAAGDPAAGANQTSTHGSRSAGRLPHLVQHHHAHVAALLAEHG- 566 Query: 490 PLDGGDVIALTLDGIGMGENGALWGGECLRV--NYRECEHLGGLPAVALPGGDLAAKQPW 547 G ++ + DG G G +G +WGGE L V + E + L + LPGGD A + P+ Sbjct: 567 -RLGDTILGVAFDGTGYGLDGTIWGGEVLLVGPDVARAERVAHLRPIGLPGGDAAVRNPY 625 Query: 548 RNLLAQCLRFVPEW-QNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG 606 R LA +W + + + L A++RG+ +S GR FDAVA+ LG Sbjct: 626 RVALAHLAAADLDWTADLAPVRACSVAELRTLRTALDRGVACVPCTSMGRLFDAVASLLG 685 Query: 607 CAPATLSYEGEAACALEALAASCHGVTHP------------VTMPRVDNQLDLATFWQQW 654 ++YE +AA LEALAA+ G ++ + LD Sbjct: 686 V-RHRITYEAQAAVELEALAAAEFGGAGLGGAGLGGAGACRLSFGLANGVLDPVGVLAGI 744 Query: 655 ---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 L V A AFH A+A A + G+ + +GGV N +L Sbjct: 745 VAGLRAGVAVPVLAGAFHLAVADAVAEVAGLARRRYGVRLVGLTGGVFANVVLTRACRAR 804 Query: 712 L--ADFTLLFPQSLPAGDGGLSLGQGVIAA 739 L A F +L + +P GDGGL+LGQ +AA Sbjct: 805 LATAGFDVLVHRVVPPGDGGLALGQAAVAA 834 >UniRef50_B0TCN1 [nife] hydrogenase maturation protein hypf n=2 Tax=Heliobacteriaceae RepID=B0TCN1_HELMI Length = 844 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 271/655 (41%), Positives = 351/655 (53%), Gaps = 39/655 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 +N + + I G VQGVGFRPFV++LA +L L G V N GVEVRL E FL Sbjct: 4 GENANQARMVLITGTVQGVGFRPFVYRLATRLGLAGWVQNGAKGVEVRLEGALGSIEAFL 63 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTG-----GTMNTQIVPDAATCPACL 113 L PPL+RID ++ + F+I S + ++ PD A CP C Sbjct: 64 QALKAEAPPLSRIDRIQVREAP-VEGLRLFSIAVSDAPDRTADVAHARVPPDVALCPECR 122 Query: 114 AEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRR 173 EM+ P +R Y YPF NCT+CGPRFTIIR +PYDR T MAAFP+CPAC ++Y DPLDRR Sbjct: 123 REMDDPADRHYGYPFTNCTNCGPRFTIIRQVPYDRAQTSMAAFPMCPACRRDYDDPLDRR 182 Query: 174 FHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 FHAQP ACP CGP + + ++ ++ G IVA+KG+GGFHL CD RN+ Sbjct: 183 FHAQPTACPLCGPRVWFAGSDGQEVIGDWVRLFRDSIRQGNIVALKGLGGFHLVCDGRNA 242 Query: 234 NAVATLRARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELC 287 A+A LR RK RPAK LAVM + D L+ P APIV+++++ L Sbjct: 243 TAIAELRRRKRRPAKALAVMGRDLTTLRRICRISDREAAALSGPEAPIVVLERREDAALP 302 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 ++AP + +G MLP PL HLL E LVMTSGN G P N AL L GIAD Sbjct: 303 SNLAPGTHTLGAMLPYTPLHHLLFDESLDLLVMTSGNPGGLPLVRDNRLALTQLSGIADA 362 Query: 348 FLIHNRDIVQRMDDSVVRESGEML---RRSRGYVPDALALPPGF-KNVPPVLCLGADLKN 403 F+ H+R+IV R DDSVVR + L RRSRGYVP+ + +P K +L +GA++KN Sbjct: 363 FVFHDREIVSRADDSVVRVIDDTLQFYRRSRGYVPEGIPIPWPEGKKDRTLLAVGAEMKN 422 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 F L A LSQH+GD+ + + E+LR ++ + D +PQ V D HP Y + A Sbjct: 423 AFALFGRGAAYLSQHIGDVDTCEGRDNYLESLRNLERLLDLSPQRVARDCHPQYRMTALA 482 Query: 464 REM--------------NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGEN 509 E+ LP + HHHAH AA LA++ G I + LDG G GE+ Sbjct: 483 EEIAFGDGAPTGRSEISALPIDDIQHHHAHLAAVLADNGET---GPAIGVILDGTGFGED 539 Query: 510 GALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE--WQNYSET 567 G + G E L + R+ L V LPGG+ A ++PW A E W Sbjct: 540 GMIRGFEILTGDLRDYRRHFWLRPVPLPGGEAAIRRPWLTAAAFLGEAFGEAGWSQAKAL 599 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACAL 622 + R E+ +N L SS GR FDAVAA LG SY+G+AA L Sbjct: 600 FPDRAAMVEKARRMAEKRLNTTLVSSAGRLFDAVAALLGLCWEN-SYDGQAAIEL 653 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Query: 643 NQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 ++D L PV A FH+ +A+ A GI + GGV Sbjct: 739 GEIDFGPLLSALLHDREAGVPVEVMASRFHNTIARMAEAAASVLREESGIQRVALGGGVF 798 Query: 700 HNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 N L L F +L P+ +PA DGGL+LGQG I+ R Sbjct: 799 QNPYLFTLTRRLLVRRGFFVLVPRHVPANDGGLALGQGAISLWR 842 >UniRef50_Q7VJB7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter hepaticus RepID=Q7VJB7_HELHP Length = 807 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 240/805 (29%), Positives = 364/805 (45%), Gaps = 73/805 (9%) Query: 11 LRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR----EDPETFLVQLYQHCP 66 + + G +QGVGFRPFV++LA ++ L G V N + + + L + F+ + P Sbjct: 6 IELFGIIQGVGFRPFVYRLAHKMGLKGYVQNRYNTLFICLEVPTRAILDEFITHILSSPP 65 Query: 67 PLARIDSVEREPFIWSQLPTE-FTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERR 123 P A I P + ++ F IR+S + + T + D C CL +M R Sbjct: 66 PNAHIVQHSVTPISTPHILSDYFEIRESISYSTSLPTSLPLDTRICEQCLDDMKGKE-RF 124 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y F CT CG R++II+A+PYDR T M+ F LC C EY +PL+RRFHAQP +C + Sbjct: 125 LNYAFTTCTECGARYSIIKALPYDRIHTSMSDFALCKDCQSEYDNPLNRRFHAQPNSCHQ 184 Query: 184 CGPHLEWVSHGEHA-------EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAV 236 C + + + L+ + ++K GKIVAIKG+GGF+L +A N + Sbjct: 185 CAIQMRVIDECGTIHSFSQSQDDIKLLKLIVQKIKAGKIVAIKGVGGFNLVANASNVQVI 244 Query: 237 ATLRARKHRPAKPLAVM------LPVADGLPDAARQLLTTPAAPIVLVDKKYVP------ 284 TLR RK+RP KP AVM + + + ++ L +P APIVL+++ + Sbjct: 245 KTLRNRKNRPHKPFAVMFKNLQDISSVAHINEEEKRALLSPQAPIVLLERHFKSEGIINE 304 Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG- 343 E + IAP + VG +LP N + HLL L PL+ TS NLSG+P ++ L G Sbjct: 305 ECFNLIAPQIQSVGAILPYNGIMHLLFTLLDMPLIFTSANLSGEPIITHAQELRQKLGGA 364 Query: 344 --IADGFLIHNRDIVQRMDDSVVRE---SGEMLRRSRGYVPDALALPPGFKNV------- 391 + D L +NRDI +DDS+VR +LR +RGY P +L K+ Sbjct: 365 NAVYDVMLDYNRDICNPIDDSIVRFMAGKMRILRLARGYAPASLGFKAPLKDTSLLAQEE 424 Query: 392 ---PPVLCLGADLKNTFCLV-----RGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYD 443 ++ +GA K+T + QAV+S ++GDL ++++ +Y Sbjct: 425 VQNGIIVGVGAQQKSTLSFINISWNADYQAVISPYIGDLHSVDSLIRYKLHYDFFTRLYM 484 Query: 444 FTPQYVVHDAHPGYVSSQWA---REMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 + V D HP Y S+ +A + HH AH A LAE + G I + Sbjct: 485 QEIKAVGCDLHPSYASTHFATELEAQGAQKYLLSHHKAHFYAILAESNALEESG--IGII 542 Query: 501 LDGIGMGENGALWGGECLRVNY----RECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLR 556 DG G+GE+ +WGGEC E + L GG+ A K + L+ Sbjct: 543 WDGTGLGEDKHIWGGECFIYQPDMCVGTMERVWHFEEFTLLGGESAIKDIGKLALSLMWH 602 Query: 557 FVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEG 616 + +N ++L + + GI P SS GR FDAVA LG +YEG Sbjct: 603 YG--LENVQNRVHFSPAELALLQNSFKSGI-YPQTSSVGRIFDAVAYLLGLL-EVQTYEG 658 Query: 617 EAACALEALAASCHGVT------HPVTMPRVDNQLDLATFWQQWLNWQAP--VNQRAWAF 668 ++ +E+ A + P + + L Q ++ + V + A F Sbjct: 659 QSGAIIESCALRDYAKCTEGVDIEPYSFELAKGVISLRGIIQGVIDEREKQGVERAAHRF 718 Query: 669 HDALAQGFAALMREQATMRGIT-TLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPA 725 LA AL ++ + + I + FSGGV N+ L R+ A + + +P Sbjct: 719 LHTLAHIALALAQKCSQHKNIPLKVYFSGGVFQNKFLCDRIHTLFAKNHIPFYMHEKMPC 778 Query: 726 GDGGLSLGQGVI-AAARWLAGEVQN 749 D +S Q V A + GE Sbjct: 779 NDASISFAQAVFCALIQEKQGENNE 803 >UniRef50_A8AAA4 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAA4_IGNH4 Length = 736 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 265/761 (34%), Positives = 367/761 (48%), Gaps = 52/761 (6%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGV-EVRLREDPET---FLVQLYQ 63 ++ +RG VQGVGFRP V +LA+ L L G V N G E+ + + E F+ L + Sbjct: 3 AKRIVVRGLVQGVGFRPQVARLARGLKLKGYVKNVAGGAAEIYVIGEDEKISKFIN-LLK 61 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-MNTQIVPDAATCPACLAEMNTPGER 122 PP R++ ++ E +F I +S + ++QI PD C CL EM P R Sbjct: 62 KLPPPIRVEDLQAEDAEEM-SFDDFIILKSDKSSYKHSQIPPDLGICEDCLREMLNPFSR 120 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 RY YP I+C CGPRF++IR++PYDR T MA FP C C++EYRDP D R+H Q AC Sbjct: 121 RYMYPLISCAKCGPRFSMIRSLPYDRENTSMAEFPFCAECEREYRDPWDPRYHVQGFACA 180 Query: 183 ECGPHLEWVSHGEHAE-QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRA 241 +CGP + + ++ A L G I+A+KG+GG+HLA A VA LR Sbjct: 181 KCGPKVRLLDSEGRTVLVRDPIKEAAKLLDEGFIIAVKGMGGYHLAAKATEDEVVAELRR 240 Query: 242 RKHRPAKPLAVMLPVADGLPDAA----RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEV 297 RK RP KP A+M ++ +L +P APIVL K+ L + +AP V Sbjct: 241 RKGRPRKPFALMALNSEVANRIVVVDDEELFNSPEAPIVLFRKREDGPLSELVAPGHALV 300 Query: 298 GVMLPANPLQHLLLQE-LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 GVM L +LLL +MTS N SGKP I+ E AL G+AD L H+R+IV Sbjct: 301 GVMRAYTGLHYLLLNYTADKFSIMTSANPSGKPTCITKECAL----GMADYVLEHDREIV 356 Query: 357 QRMDDSVVRESGE---MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 R+DDSVVR S LRRSRGY P L + V GA+L+N + + Sbjct: 357 HRVDDSVVRRSAGERLFLRRSRGYAPAWLEADEELLSGASV---GAELQNAGGISFSNKV 413 Query: 414 VLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSS----QWAREMNLP 469 VL+Q++GD + E LR + Y TP++V D HP Y S A E Sbjct: 414 VLTQYIGDTDEYDNLRFMEEELRWLLKQYSVTPEFVAADLHPRYSSKLLALSLAEEFGAE 473 Query: 470 TQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLG 529 V HHHAHAA+ +AE + + +DG G G +G WGGE LRVN + E + Sbjct: 474 LVEVQHHHAHAASVMAEARLEEAAA----IVVDGTGYGLDGNSWGGEVLRVNREDFERVA 529 Query: 530 GLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSVLARAIERG 585 L LPGGD A K P R L+ + + + + + V + + R Sbjct: 530 HLEYFPLPGGDRAVKYPARALMGLLYAAGEDLEKWKGKLARALPGGEGEFEVARKVLGR- 588 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQL 645 + L SS GR DA AA LG A SYEGE A LEA + +T + N + Sbjct: 589 --SVLTSSLGRTLDAFAALLGVAYER-SYEGEPAMLLEAASLGGKPLTKLDLI--DGNVI 643 Query: 646 DLATFWQ---QWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 + + + L+ + A+ L + + A + +V SGG N Sbjct: 644 KVTELLRWAVEALDSGKKLRDVAFTIQYNLGY---NMALKAAELG--LPVVVSGGAAVNE 698 Query: 703 LLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + + L P +P GDGG++LGQ +IA+ + Sbjct: 699 PFLLGVKEVVK---PLLPHKVPPGDGGIALGQLIIASRKLK 736 >UniRef50_UPI000197837F transcriptional regulatory protein HypF n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197837F Length = 827 Score = 772 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 236/824 (28%), Positives = 377/824 (45%), Gaps = 90/824 (10%) Query: 4 NTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP---ETFLVQ 60 + + + G +QGVGFRPFV+Q+A LNL G V N + + + L E FL + Sbjct: 15 DAKTAYAIELFGIIQGVGFRPFVYQVATSLNLKGYVQNRYNSLYIYLESTLIQSEQFLQE 74 Query: 61 LYQHCPPLARIDSVEREPFIW-SQLPTEFTIRQSTGGTMN--TQIVPDAATCPACLAEM- 116 + Q+ PP A I + + + ++F I S+ + + D A C ACL +M Sbjct: 75 ILQNPPPNAVIHAHTMHQVPFVTPPYSDFRILASSTEKQDDKLFLPQDVAICQACLQDMG 134 Query: 117 -------------NTPGERRYR-YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPAC 162 N+ R++ Y F C++CG R +II A+PYDR T M F C C Sbjct: 135 CNTGQDIKQDTKQNSRQNPRFQDYAFTTCSYCGARHSIIHALPYDRTNTSMREFKKCKDC 194 Query: 163 DKEYRDPLDRRFHAQPVACPECGPHLEWV----------SHGEHAEQEAALQAAIAQLKM 212 ++EY P +RRFHAQP++C +C + + ++ + L ++ Sbjct: 195 EREYHTPTNRRFHAQPISCNQCAIRMRLIIPSLKQSYIFAYPKATSDILLLALVAQKIME 254 Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVM------LPVADGLPDAARQ 266 GKI+AIKGIGGF+L A N A+ +L+ RK+R KP A+M + + ++ RQ Sbjct: 255 GKIIAIKGIGGFNLIASATNIQAIMSLKKRKNRSKKPFAIMFKNLQDIASVAEINESERQ 314 Query: 267 LLTTPAAPIVLV-------------DKKYVPELC----DDIAPDLNEVGVMLPANPLQHL 309 L +P APIVL+ +K+ L + IAP ++ +G +LP N + HL Sbjct: 315 ALLSPQAPIVLLNKHFHNRQHNRSHNKRENAILSSQALELIAPQVSSIGAILPYNGIMHL 374 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG- 368 L + L PL+ TS N+SG P ++ + L G+ D L ++R+I +DDS++R Sbjct: 375 LFRFLNTPLIFTSANVSGTPIITKLDELMEKLSGVFDMVLDYDREITHALDDSIMRFMAG 434 Query: 369 --EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 LR SRG+ P L F + L LGA K++ +V ++S + GDL + Sbjct: 435 ELRPLRLSRGFTPLFL----PFGSKKLCLSLGAQQKSSLSIVYKNT-LISPYFGDLHNVD 489 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM------------------NL 468 ++ + L+ ++Y P+ +V D HP Y S+ A+ + + Sbjct: 490 SICRYEKELQFFLSLYVNKPKVIVSDLHPQYASTHLAKNLTNNTALLDSATDSATSLDSP 549 Query: 469 PTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN--YRECE 526 + HH AH A LAE + G + DG G+GE+G +WGGE + ++ Sbjct: 550 QFLQISHHKAHFYAILAESNALNNDG--FGIIWDGTGLGEDGGIWGGEGFIYDSKHKSMS 607 Query: 527 HLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGI 586 + L AL GG+ + K+ R L + + QN + +++N S+L A E + Sbjct: 608 RIFSLKPFALLGGEGSIKEIGRLALGLLWSYGIQTQNLATKNIEKRENISLLQNAFESKV 667 Query: 587 NAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLD 646 SS GR D VA LG SYEG++ LE+ A P + ++D Sbjct: 668 -FLQTSSMGRLIDCVACLLGIL-EVQSYEGQSGALLESYALRERAEVSPYPFKIDNGEID 725 Query: 647 LATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 706 ++ L Q + A F + LA + + + + + FSGGV N+ L Sbjct: 726 CKAMIEEILKTQDK-AKGAKRFLETLAYMALEMSEKVLKTKRVR-VYFSGGVFQNKFLCD 783 Query: 707 RLAHYLADFTL--LFPQSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 R+ + + + LP D +S GQ V + G+V+ Sbjct: 784 RIHTLFKEHNIPFYMHKILPCNDFSISFGQAVCGSMEQNKGDVK 827 >UniRef50_A2BKU6 Hydrogenase maturation protein n=3 Tax=Archaea RepID=A2BKU6_HYPBU Length = 771 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 264/771 (34%), Positives = 375/771 (48%), Gaps = 42/771 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPET---FLVQLY 62 +++R+ G VQGVGFRPFV +LA++L L G V N G VE+ + P++ F+ L Sbjct: 5 EALRVRVVGLVQGVGFRPFVHRLAERLGLAGYVRNMGGSEVEILVEGPPDSLRLFVSLLE 64 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMN-TQIVPDAATCPACLAEMNTPGE 121 + PP A I+ + EP + T F I +S+ + I PD C C E+ PG Sbjct: 65 KEKPPPAIIEEMRVEPVPA-RGLTVFRIEKSSRSRKERSMIPPDFGICDWCAREVLEPGT 123 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLD-RRFHAQPVA 180 R YRYP+ +C CGPRF+++ +PYDR T M FP C C ++Y D + RR+HAQ + Sbjct: 124 RFYRYPWTSCAWCGPRFSMMYDIPYDRENTAMREFPFCEECRRDYEDMGNIRRYHAQGFS 183 Query: 181 CPECGPHLEWVSHGEHAEQ-EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 CP CGP + E + A + G IVA+KG+GGFH+A A + VA + Sbjct: 184 CPRCGPKTILLDGRGEPLDVEDPVAEAARLIDEGHIVAVKGVGGFHIASLATDDEVVARV 243 Query: 240 RARKHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R K RP +PLA+M L A QLL +P PI+L+ K+ + +AP Sbjct: 244 RRIKSRPTQPLALMARDCSVAAGLVALDAHACQLLRSPRRPILLLPKRDDAPVSPLVAPG 303 Query: 294 LNEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L+ +G+MLP L LLL + LVMTSGN G P + E L L G D L HN Sbjct: 304 LDTLGIMLPYTGLHLLLLHMVRDGFLVMTSGNRHGMPMCRTVECILDQLGGEIDYILTHN 363 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+IV R+DDSVVR + +LRR+RGY P+ + + ++V + +GADL+ + Sbjct: 364 REIVHRVDDSVVRFTAGKPVLLRRARGYAPEWIRIS---RSVGEHVAVGADLQTAGAVSF 420 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA----RE 465 ++ VL+Q++GDL + G + E L+ + +Y P V D HP Y S + A E Sbjct: 421 DDKVVLTQYIGDLDEPGQLEELEEELKWLIRVYGLRPSSVALDMHPAYESRRLAAKLSEE 480 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 ++ V HHHAHA A A+ V A+T+DG G G +G +WGGE + Sbjct: 481 LDAEPVEVQHHHAHAVAAAADAGLDPWDY-VPAVTVDGAGYGVDGVIWGGEAMIAGAEGF 539 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQ------QNWSVLA 579 E G + LPGGD A K+P R L+ + + + + +V + Sbjct: 540 ERTGTIKPFPLPGGDTATKRPLRILIGILSQGWGLDEILQLLEKMGHLGKGISEEEAVTS 599 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 + R PLASS GR DAV+A LG +YEGE A LEA A G P P Sbjct: 600 YKLARSNRTPLASSAGRLLDAVSALLGLRYRR-TYEGEPAIVLEAYARRHGGKPLPDEPP 658 Query: 640 RVD----NQLDLATFWQQW---LNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTL 692 + LD + L A + + A + E L Sbjct: 659 ATSYKGLSALDPLRVLEWVVEKLEEGVEPWHLAATVMYWVGRHLAETVLENYDGARDKPL 718 Query: 693 VFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 + SGG N + A T+ P +P GDGG++LGQ ++AAA+ Sbjct: 719 LISGGAAVNDYIYMGAADAAKAYGRTVHIPGKVPPGDGGIALGQIIVAAAK 769 >UniRef50_A5FCZ2 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCZ2_FLAJ1 Length = 756 Score = 763 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 236/763 (30%), Positives = 363/763 (47%), Gaps = 49/763 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLY 62 + Q+ I G VQGVGFRPFV+ A Q NL G V N+ GV V ++E+ F+ QL Sbjct: 2 TPTFQITISGIVQGVGFRPFVYNTAIQFNLKGFVSNNEFGVVVIVQEEEKTIREFVAQLK 61 Query: 63 QHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGG-TMNTQIVPDAATCPACLAEMNTPGE 121 + P A I++++ + F I+ + G ++N + PD A C C E+ P Sbjct: 62 KRHPKKAIINTIQVSEIETEERFDLFFIKPTEKGISINAPLTPDFAICKNCKEEILDPQN 121 Query: 122 RRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVAC 181 RR+ YPF +CT CGPR+ I P++R T M+ F +C C +EY +P D RFH+Q +C Sbjct: 122 RRFYYPFTSCTSCGPRYAIAEKFPFERENTSMSPFKMCQTCLEEYLNPNDIRFHSQTNSC 181 Query: 182 PECGPHLEWVSHGE---HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 PECG + + + + ++ +L G+I+A+K G+ L CD N+ V Sbjct: 182 PECGIQIVFTDNNGTLISGTNKEIFESISEKLNQGQIIAVKNTSGYLLLCDGSNNQTVQE 241 Query: 239 LRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELC-DDIA 291 LR RK R AKP AV+ + ++LL + APIV++ K +L ++IA Sbjct: 242 LRNRKRRSAKPFAVLFSDFKQIKKHLLHDKTEKKLLKSTQAPIVILPIKNQKKLAVNEIA 301 Query: 292 PDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIH 351 P++ +G MLP + + HL+ Q PLV TSGN +G P + +A+ L IAD +L H Sbjct: 302 PNMKTIGAMLPNSGILHLISNLFQKPLVATSGNFNGSPLFFNQNEAVQSLNSIADYYLHH 361 Query: 352 NRDIVQRMDDSVVRESGE-----MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 N +I DDSV+R S + +LRR+RG P + +LCLGA LKNT Sbjct: 362 NLEIQNSQDDSVIRFSRKNKQKIVLRRARGLAP-NIDNFHLNNTSDKILCLGAALKNTIT 420 Query: 407 LVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM 466 + +Q S+++G++ + ++ ++ Q+ +DF PQ +V+D HP Y +++ + Sbjct: 421 IS-NQQIYQSEYIGNVLNYDTYKRFENRIQNYQHFFDFVPQTIVYDQHPSYDNNKIVSDF 479 Query: 467 -----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVN 521 L T V HH AH AA L E + ++ + DG G G ++GGE + N Sbjct: 480 LKENPLLKTIKVQHHEAHFAAILGEKKLWKKS-KILGVIWDGSGFGNENEIYGGEFFKYN 538 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARA 581 E +G L GD A P + L+ + +Y + + +V ++ Sbjct: 539 RDEITRIGHLEYFPWILGDKMALNPKMSALSI-----SQNDDY-FQSFFNKNELTVYSKL 592 Query: 582 IERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA-----ASCHGVTHPV 636 IE + SS GR FDAVA LG +S+EG+ LE LA S + + Sbjct: 593 IENSV--IKTSSIGRLFDAVAFTLGF-KGNISFEGQTGMFLENLAQKAFYKSNVKLKDYL 649 Query: 637 TMPRVDNQLDLATFWQQWL---NWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLV 693 + N + Q + N A FH L + + Sbjct: 650 KDENITNIIPSKKLLVQIVKAFQNNIDCNVIALNFHHTLVKCIEKTAL----FSKSKEIA 705 Query: 694 FSGGVIHNRLLRARLAHYLA-DFTLLFPQSLPAGDGGLSLGQG 735 FSGGV N +L + +L ++ L F ++L D +S GQ Sbjct: 706 FSGGVFQNSVLVDLIIDHLQPNYKLHFHETLSPNDENISFGQL 748 >UniRef50_B4S327 Hydrogenase maturation protein HypF n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S327_ALTMD Length = 768 Score = 762 bits (1969), Expect = 0.0, Method: Composition-based stats. Identities = 257/763 (33%), Positives = 386/763 (50%), Gaps = 43/763 (5%) Query: 2 AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRE---DPETFL 58 K+ + +L I G +QGVGFRP V+ LA + ++ G V ND V + D E F+ Sbjct: 12 NKSKTIAYELNITGVIQGVGFRPLVYCLAYEKSIVGWVQNDCGCVRIHAEGTELDVEQFV 71 Query: 59 VQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT--MNTQIVPDAATCPACLAEM 116 L + L I +E++ S + FTI++S I D C AC AE+ Sbjct: 72 FDLLNNG-SLVSISLLEKKQVKLSNV-DSFTIKESGHDIACGAISIPKDVYLCGACKAEL 129 Query: 117 NTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHA 176 + RR Y FI C+ CGPRF+++RAMPYDR M+AFP+C C KEY+ P DRRFHA Sbjct: 130 LSNTNRRGTYSFIACSKCGPRFSMLRAMPYDRKNMSMSAFPMCELCRKEYQSPTDRRFHA 189 Query: 177 QPVACPECGPHLEWVSHGEHAEQE---AALQAAIAQLKMGKIVAIKGIGGFHLACDARNS 233 QP++C CGP + + G + + +A L GKIVA+K IGG+HL CDA+++ Sbjct: 190 QPISCRVCGPEVFCSTVGGRVVSQGDVDVVATVVAYLNQGKIVALKSIGGYHLLCDAQST 249 Query: 234 NAVATLRARKHRPAKPLAVMLPVAD-------------GLPDAARQLLTTPAAPIVLVDK 280 AV LR RK+RP KP AVMLP + R LL +P PI+L K Sbjct: 250 EAVDLLRQRKNRPDKPFAVMLPEPRADETSEDWLDKCVAVDSHQRALLLSPVRPILLAKK 309 Query: 281 KYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + + D++AP L ++GVMLP + L L++Q+ P+V TSGN+ G+P S A Sbjct: 310 QSNVPIADNVAPMLRDLGVMLPCSGLHLLIMQQFNRPMVATSGNIYGEPMVTSTSSAQQH 369 Query: 341 LQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L +AD F+ HNRDI ++DDSV+R +R RG P + L + P+L + Sbjct: 370 LSMLADIFVHHNRDIFHKLDDSVLRTLKSGTIPIRLGRGISP--IELSLPYTVQEPMLAV 427 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGY 457 GA+ KNT + + +++ H+GDL +Q + + + Q +Y PQ ++ D+HPGY Sbjct: 428 GANQKNTVAIALNNRLIVTPHIGDLDSPIMQAHFEKCISDFQALYHVHPQRILCDSHPGY 487 Query: 458 VSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGEC 517 +SS+WA+ LPT V H A A + DG G+GENG +WGGE Sbjct: 488 ISSRWAKGSELPTTKV---LHHHAHASAWALAAEISTPSLVFVWDGTGLGENGEMWGGEV 544 Query: 518 LRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSV 577 + + L + L GG+ QPWR+ + ++ Q S Sbjct: 545 FCGTPGNWKRVASLAPMKLQGGNKVPNQPWRSAASLVWGTNFTGIDF---KPFDPQQLS- 600 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVT 637 A + +N ++SS GR FDA A A C + +SYEG+A LE++A++ V P+T Sbjct: 601 -YNAWQNELNCHVSSSMGRLFDAAAFAC-CEQSEVSYEGQAPMMLESVASTPSKV-MPLT 657 Query: 638 MPRVDNQ---LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 + + +++ +D T + +++ RA FH +L + + + Sbjct: 658 LVQKNDEFIQMDWRTLVPELFDFKVSPQTRAANFHASLIETVWEVTLHCRKKFNFDHIGL 717 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQG 735 +GGV NR+L ++ +D ++ P SLP D +S+GQ Sbjct: 718 AGGVFQNRILCDGISQRFLQSDIPVVIPSSLPLNDAAISVGQI 760 >UniRef50_A1RR07 (NiFe) hydrogenase maturation protein HypF n=4 Tax=Thermoproteaceae RepID=A1RR07_PYRIL Length = 748 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 259/761 (34%), Positives = 362/761 (47%), Gaps = 45/761 (5%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDPE-TFLVQLYQH 64 + I G VQGVGFRP+V LA QL L G V N G G VE+ + + FL L Sbjct: 3 KAYLIHIIGIVQGVGFRPYVKILADQLGLSGYVKNLGGGEVEIYVEGERSREFLDSLLNG 62 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPGERR 123 P I+ + + FTI +S+ I PD A C CL E+ ERR Sbjct: 63 RPKAIYIEDIRVIEVAP-RGVRGFTIEKSSQEVETVSMIPPDLAICDECLREVLEGDERR 121 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDP---LDRRFHAQPVA 180 RYPF +C+ CGPRF+II+ +PYDR T AFPLC C +EY DP RRF+ Q ++ Sbjct: 122 RRYPFNSCSFCGPRFSIIKKLPYDRENTSWTAFPLCDKCTREYNDPKVGGIRRFYYQGIS 181 Query: 181 CPECGPHLEWVSHGEHAEQ-EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATL 239 C GP ++ + + A + G IVA+KG+GGFH+ A + + VA L Sbjct: 182 CKNDGPQVKLLDSTGEPIDVGDPISEASRLINEGYIVAVKGVGGFHIFALASDDDVVAKL 241 Query: 240 RARKHRPAKPLAVMLPVADG------LPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPD 293 R RK RP +P A+M + + A +LLT+P PIVL+ K+ ++P Sbjct: 242 RKRKKRPTQPFAIMALDLETAGRLAVVNKTAAELLTSPQRPIVLLFKREDSPASPLVSPG 301 Query: 294 LNEVGVMLPANPLQHLLLQEL-QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHN 352 L++ G+ LP LQ+LLL E+ + TSGN+ G+P G+AD L H Sbjct: 302 LDKEGIFLPYTALQYLLLSEIRDKFAIATSGNIHGEPMCTDWRCVAK--LGVADYILDHT 359 Query: 353 RDIVQRMDDSVVRES---GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 +IV R+DDSVVR + +LRR RGY P + P + GADL+ + Sbjct: 360 LEIVHRVDDSVVRFTAGRPTLLRRGRGYAPVWIKTPLRLGRAA--VAFGADLQTAGGVGI 417 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WARE 465 G++A+L+Q++GDL LR + Y +V D + Y S + WA E Sbjct: 418 GDKAILTQYIGDLDSFKALEDLDRELRWLVQTYRLREFVLVCDLNQTYNSHRLCREWAEE 477 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 N V H A LA +A+ +DG+G+GE+GA WGGE L V+ Sbjct: 478 FNAEIYMVQ---HHHAHALATAADVGVAEPFVAVAIDGVGLGEDGAAWGGEVLYVDGARY 534 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQ------NWSVLA 579 E + L V +PGGDLAA +P R LA ++ E + E + ++ ++A Sbjct: 535 ERVRHLAYVPMPGGDLAALRPARMALAYLFKYFGEDWDLVERLKLAERLPGGLSEAQIVA 594 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMP 639 R +++ SS GRF DAVAAALG A +YEGE A LEA AA + Sbjct: 595 REVKKSR--LYTSSVGRFLDAVAAALGVAWER-TYEGEPAIRLEATAAGGR-----LIEL 646 Query: 640 RVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI 699 ++Q++L + A V A+ L Q E A +G+ +V GG Sbjct: 647 EAEDQVELFGQLIELYLKGADVKDLAYTAQYKLGQILGKWACETAERKGVRHIVVGGGAA 706 Query: 700 HNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 N + A L + L P P GDGG++LGQ A Sbjct: 707 VNDYIIAGL-ESVCGRAAL-PSKTPPGDGGIALGQLYYLAH 745 >UniRef50_A3Z0U0 Transcriptional regulatory protein; HypF n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z0U0_9SYNE Length = 798 Score = 747 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 293/795 (36%), Positives = 384/795 (48%), Gaps = 74/795 (9%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 +QL I G VQGVGFRP V +LA++L L G V N G GV + L+ E L +L Q Sbjct: 4 RLQLEIEGLVQGVGFRPLVARLARELGLSGQVFNTGAGVLLELQGPAEAIATLLQRLRQQ 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTI----RQSTGGTMN------TQIVPDAATCPACLA 114 P +RID + R + F I +S GG I PD A CPAC A Sbjct: 64 LPAHSRIDRIRRHRRPLVEGEAGFEIQAAPMESPGGKREDTSVRWALIQPDLAPCPACRA 123 Query: 115 EMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRF 174 E++ P RR Y I+C HCGPR++++ A+P+DR T +AAF LCPAC EY DP DRR Sbjct: 124 ELHDPDNRRCGYALISCVHCGPRYSLMGALPFDRAHTSLAAFALCPACQAEYDDPSDRRC 183 Query: 175 HAQPVACPECGPHLEWVSHGEHAEQE----------AALQAAIAQLKMGKIVAIKGIGGF 224 HAQ +ACP CGP L W G + LQAA A LK + VA+KG+GGF Sbjct: 184 HAQTIACPRCGPRLSWWDTGGQRLSDPRRPHPSGPSPCLQAAAAALKANRTVALKGVGGF 243 Query: 225 HLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLV 278 L AR AV LR RK RP KPLAVM P L QLL +PAAPIVL+ Sbjct: 244 QLLVRARCQAAVTELRRRKGRPEKPLAVMAPDLAWVRRHCHLNRPEAQLLGSPAAPIVLL 303 Query: 279 DKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQAL 338 ++ +CD +AP +GVMLP++PL LLL+ L PLV TSGN SG+P + +AL Sbjct: 304 RRRGEAGVCDAVAPGNPWLGVMLPSSPLHLLLLELLGEPLVATSGNRSGEPLSHDETKAL 363 Query: 339 ADLQGIADGFLIHNRDIVQRMDDSVVRES---GEMLRRSRGYVPDALALP--------PG 387 +L G+ADGFL+H+R I+ +DDS+ + +LR +RGY P A+ LP P Sbjct: 364 QELAGLADGFLVHDRPIINPVDDSIAQVVCGEPMLLRHARGYAPTAVDLPCGGEPGVDPQ 423 Query: 388 FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 + + +G LK+ L G +A+L HLGDL + R +L + P Sbjct: 424 TQAPTGEVAMGGQLKSALALGWGRRALLGPHLGDLDSAAGEAHLRRSLDAALARHGLHPA 483 Query: 448 YVVHDAHPGYVSSQ----WAREMNLPT-QTVLHHHAHAAACLAEHQWPLDGGDVIALTLD 502 D H Y S + A P V HHHAH ACLAEH + + D Sbjct: 484 GYAVDQHRSYRSHRIGLELAAAHGCPVPLGVQHHHAHLLACLAEHGL---APPQVGVAWD 540 Query: 503 GIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ 562 G G G +G LWGGE LR+ L LPG + A ++P R L Sbjct: 541 GAGQGSDGTLWGGEVLRLEQSGFRAEARLRPFPLPGAERAMREPRRAALGLLFAARGSEG 600 Query: 563 -----NYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGE 617 A+ + VL+R +++G+ +P SS GR FDAVA+ LG S+EG+ Sbjct: 601 LDRATGTLSMAAFSAEERQVLSRMLQQGLQSPWCSSVGRLFDAVASLLGL-QQRCSFEGQ 659 Query: 618 AACALEALAAS---CHGVTHPVTMPR--------VDNQLDLATFWQQWLNW---QAPVNQ 663 AA LEA A+ + + + LD Q + Sbjct: 660 AALKLEAAASHAGTAGRRRYALVLRTHTEPGSGSEPWLLDWHPLLQDLIKDQRRGVAPEA 719 Query: 664 RAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQ 721 A AFH Q A + A + L+ GG NRLL A L A L+P+ Sbjct: 720 IALAFH----QALADALVALAVQLDLERLLLGGGCFQNRLLLALAVKGLRRAGIEPLWPR 775 Query: 722 SLPAGDGGLSLGQGV 736 +P DGGL+LGQ + Sbjct: 776 RIPCNDGGLALGQLM 790 >UniRef50_C9LR00 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR00_9FIRM Length = 769 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 236/766 (30%), Positives = 362/766 (47%), Gaps = 62/766 (8%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHCP 66 +L + G+VQGVGFRP V ++A++L L G V N G VE+ + + FL L Q Sbjct: 8 RLSVAGRVQGVGFRPSVCRMAKELKLTGTVQNLGGEVEIYITGTREKIDAFLCGLKQMER 67 Query: 67 PLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRY 126 P A ++ V+RE + + FT S D + C ACL EM T G RR Y Sbjct: 68 P-ALVECVKREERPLTP-FSAFTSIPSRESENKILAPADISVCSACLKEMKTQGNRRCHY 125 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 P+I+CT CGPR+T+++ +PYDR T A+PLC C +EYRD +RR H + +AC +CGP Sbjct: 126 PYISCTACGPRYTVLKKLPYDRENTAFDAYPLCDKCYEEYRDMNNRRCHGETIACHDCGP 185 Query: 187 HLEWVSHG----EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 L G QE LQ+A L G+I+ +K +GG++L C +AV LR Sbjct: 186 RLLAKMRGSLSAGPWSQEELLQSAKDLLFHGEIIMVKSVGGYNLVCRGDRDDAVQRLRVL 245 Query: 243 KHRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAPDL 294 K R KP A+++ + ++LL +P PIVL+ ++ P + + Sbjct: 246 KQRRDKPFALLVATVGEAEKLCHISREEKELLESPQKPIVLLKRRKKSMPLISPAVTELT 305 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI--ADGFLIHN 352 +GV LP L + LL E++ PLV+TS N +G+P A A + Sbjct: 306 ESLGVFLPPFGL-YALLAEIKIPLVVTSCNFTGEPIIYKQADAFAFYESHESISALFYDE 364 Query: 353 RDIVQRMDDSVVRESG---EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 R+I++ DDSV R + ++LRR+RGY+P+ +A+ VL LG +++ +F L Sbjct: 365 REILRPADDSVTRIAAGAVQILRRTRGYMPEPVAVEKKGMR---VLALGGEVEPSFALSV 421 Query: 410 GEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV----SSQWARE 465 +Q DL+ + +R + + + +P +V D HP Y S + A++ Sbjct: 422 NNLIYSAQVPSDLTLEKSSAFYRRLVADWEELLHISPDILVCDLHPCYTTAEESRKLAKK 481 Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYREC 525 +++P V HHH HA + +AEH G +A+ DG G G +G +WGGE L R Sbjct: 482 LDVPVLEVQHHHGHALSVMAEHHLD---GKCLAVIFDGTGFGTDGTVWGGEFLLCEDRSF 538 Query: 526 EHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERG 585 +G + +++ D + +Q W++LL + + G Sbjct: 539 IRVGAVKPISMISSDESVRQAWKSLLCHLVHSGIPSDDKRAAVVKAAVA---------GG 589 Query: 586 INAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE---ALAASCHGVTHPVTMPRVD 642 +N +SS GR FDAV+AALG A +Y+G A LE ALA + ++ Sbjct: 590 LNTVKSSSMGRLFDAVSAALGLADYN-TYQGRCAMLLENQAALAKRERKIPTELSFNEEV 648 Query: 643 NQ--------LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVF 694 + D A W++ A FH + ++ + G+ T++ Sbjct: 649 VETENGSVTFFDPAPLWEKV--TGEDKAAAALGFH----EAVIRIVERMSEKTGVETVIL 702 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIA 738 SGG NRLL L + + Q+LP GDGGL+ GQ Sbjct: 703 SGGCFANRLLLEGCVEALKGKGHAVYWNQALPPGDGGLAFGQAWYG 748 >UniRef50_Q1CVB1 Transcriptional regulator n=17 Tax=Helicobacter RepID=Q1CVB1_HELPH Length = 769 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 237/750 (31%), Positives = 358/750 (47%), Gaps = 33/750 (4%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL-REDPETFLVQLYQHCPPL 68 ++ + G VQGVG RPF++ LAQ+L L G V N +E+ L E+FL L + PPL Sbjct: 22 KITLFGVVQGVGMRPFIYTLAQKLELVGFVRNTQAALEIILPAHQTESFLNALKKGLPPL 81 Query: 69 ARIDSVEREPFIWSQLPTEFTIRQSTGGTMN--TQIVPDAATCPACLAEMNTPGERRYRY 126 A ++ + P+ + F I +S +N +QI D C CL E+ + Y Sbjct: 82 ALVEKITISPYDKALHFNGFRILESKNHPLNLLSQIPKDLGVCKDCLHEIRDKNSPYFHY 141 Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186 F +C CG R++++ A+PYDR + + F LC C Y+DP ++RFH Q ++C +CG Sbjct: 142 AFNSCAKCGARYSLLNALPYDRENSALKPFKLCEFCASIYQDPTNKRFHIQGISCKKCGI 201 Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L + + + + AL ++ GKI+A+KG+GGF L CDARN + LR K+RP Sbjct: 202 VLNY----KRFKNDDALLECAKDIQKGKIIALKGLGGFALLCDARNFQTIERLRLLKNRP 257 Query: 247 AKPLAVMLPVADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 KP A+M + + A + L++ +API+L KK +L +IA + + GV+ Sbjct: 258 LKPFALMFKDLNSVKQHAFLNALECESLSSISAPILLARKKPDTQLAPNIAKNSSFYGVI 317 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 LP PL LLL L P+V TS N S P A + L I D L HNR I+ R+D Sbjct: 318 LPYTPLHALLLDLLDFPIVFTSANFSSLPLANDEAEI-DALSFIFDFKLTHNRAIIHRID 376 Query: 361 DSV---VRESGEMLRRSRGYVPDALALPPGFK-NVPPVLCLGADLKNTFCLVRGE--QAV 414 DS+ + + +R +RG+ P L LP + +L LGA+ K F L+ E + Sbjct: 377 DSIAQCIDNAIRPMRLARGFAPLYLTLPKRSNGSQKKILALGAEQKGHFSLLDSETSTLL 436 Query: 415 LSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVL 474 LS GDLS + ++E L YDF P + D H Y +++ A + N P V Sbjct: 437 LSPFCGDLSVLENEKHFKETLNFFLKTYDFKPTLLACDKHKNYTTTKMAFDFNTPLLQVQ 496 Query: 475 HHHAHAAACLAEH--QWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLP 532 HHHAH A + + Q P I + DG G EN ++G EC + E + Sbjct: 497 HHHAHFLASILDALLQDPHLNHPFIGIVWDGSGAYEN-KIYGAECFVGDLERIEEMARFE 555 Query: 533 AVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLAS 592 L GG A K+P R +L L+ ++ + + ++ I + + Sbjct: 556 EFLLLGGQKAIKEPKRLVLEIALKHQLNKLLKRVQKHFKEDELEIFQQMHDKKIQSIATN 615 Query: 593 SCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPVTMPRVDNQL-DLATF 650 S GR FD VA +L T+S+E E+ LE LA + +P T+ L D Sbjct: 616 SIGRLFDIVAFSLDLT-GTISFEAESGQVLENLALQSDEIAFYPFTIKNSVVCLKDFYQA 674 Query: 651 WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAH 710 +++ L A F ++L + AL+ +V SGGV N+LL +LA Sbjct: 675 FEKDL-GVLEPKHIAKKFFNSLVEIITALI----APFKEHVVVCSGGVFCNQLLCEQLAK 729 Query: 711 YLADFT--LLFPQSLPAGDGGLSLGQGVIA 738 L F + P D + +GQ ++A Sbjct: 730 RLRGLKRQYFFHKHFPPNDSSIPIGQALMA 759 >UniRef50_A6FYA9 Putative [NiFe] hydrogenase maturation protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYA9_9DELT Length = 734 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 252/742 (33%), Positives = 348/742 (46%), Gaps = 39/742 (5%) Query: 21 GFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLV---QLYQHCPPLARIDSVERE 77 GFRPFV LA+ L L G V N G V V + +L + P A+I++ R Sbjct: 2 GFRPFVAGLARGLGLRGHVENRGGEVIVAIEGSAAALDAFAARLPEEAPEAAQIEA-ARW 60 Query: 78 PFIWSQLPTEFTIRQSTG-GTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGP 136 + L F IR S G I PD C ACLAE+ P +RR+ Y CT CGP Sbjct: 61 MEVEGGLGDGFVIRASEARGEGVLAIGPDLRVCEACLAEVGDPEDRRFGYGLNACTACGP 120 Query: 137 RFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH 196 R TI P+ R + MA+FP CPAC E+ DP DRR+HA+ +ACP+CGP L + Sbjct: 121 RLTITARSPWARADSAMASFPACPACQGEFEDPEDRRWHAEAIACPDCGPRLRLEALDGR 180 Query: 197 --AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML 254 A E A+++A L+ G+++ +KG+GGF L DAR+ AV TLRARK RP K LAVM+ Sbjct: 181 GLAGPEGAIESAAELLRRGQVLGLKGVGGFQLLVDARSEAAVETLRARKRRPHKALAVMV 240 Query: 255 PVADGLPDA------ARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 + A L +PA PIVL+ ++ P+ + +AP +G+MLP Sbjct: 241 ADLRAAAELVDLTGPAAAALDSPAGPIVLLPRRG-PQAAEGVAPGQPRLGLMLPTTAAHA 299 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES- 367 LL P+V TSGN+ G+P A + ++A A L G+AD L+H+R I++R DDSVV+ Sbjct: 300 RLLAAFGGPIVATSGNVHGRPMARTLDEARAQLTGVADALLVHDRAILRRCDDSVVQVVE 359 Query: 368 --GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDD 425 LR RG P LP +L LG L++T A++ ++GDL + Sbjct: 360 GRPRALRLGRGLAPARFELPG--SADASLLALGGHLQHTPAYAGEGLALVWPYVGDLDEA 417 Query: 426 GIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR-----EMNLPTQTVLHHHAHA 480 ++ E L + P VV DAHP Y +++WA + +L V HHHAH Sbjct: 418 ETRVAMGEGLADLCATIGRAPTRVVCDAHPDYATTRWAEAAQRRDPSLRVDRVWHHHAHV 477 Query: 481 AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD 540 AA LAEH + ++ DG G+G + + WGGE L V L L LPG D Sbjct: 478 AAVLAEHGRAA----ALGVSWDGAGLGTDRSSWGGEFLLVEGARFRRLAHLRPFPLPGAD 533 Query: 541 LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDA 600 AA+ R L Q + + R +P +S+ GR FDA Sbjct: 534 AAARDGLRVLAGMLAAA---ELPAPRLGGEQDEALARFLSIARRPRLSPSSSAVGRLFDA 590 Query: 601 VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAP 660 AA +G + A A AA +P +LD ++ +A Sbjct: 591 FAALVGLRRRSRYQAEAACALEHAAAAHGPAPAYPFGF--DGARLDWRPALVGAIDERAR 648 Query: 661 VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLL 718 A H L A++ T+ SGG N LL A + L +L Sbjct: 649 PGLVAARVHATLISMILAVVARHRPR----TVALSGGCFANALLLAGASEALRGGGVEVL 704 Query: 719 FPQSLPAGDGGLSLGQGVIAAA 740 P+ LP GDGGL+LGQ +A Sbjct: 705 SPERLPPGDGGLALGQAWVATR 726 >UniRef50_B2JX90 SUA5/yciO/yrdC domain n=1 Tax=Burkholderia phymatum STM815 RepID=B2JX90_BURP8 Length = 769 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 265/784 (33%), Positives = 352/784 (44%), Gaps = 68/784 (8%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 ++ + G VQGVGFR FV +LA+ NL +VC +GV + +R + + F L + Sbjct: 3 ERKRVEVSGIVQGVGFRSFVRRLARHFNLSVEVCKGTNGVPIDIRGEGRNLDAFRAALAE 62 Query: 64 HCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQ-IVPDAATCPACLAEMNTPGER 122 P LA ID+ R S F I +ST + I +A C+ E+ T G R Sbjct: 63 QPPLLAHIDAARRTAGTPSPAMRYFCIAESTEAVTSQSCIPAYSALRDMCIDELFTEGGR 122 Query: 123 RYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACP 182 R+R+PFI CT CGPR +I PY R T M AF LC C EY D DRRFHA+ +AC Sbjct: 123 RWRHPFICCTDCGPRDALIHRTPYHRAHTSMTAFALCERCAAEYSDLADRRFHAETMACT 182 Query: 183 ECGPHLEW-------VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 ECGP L + + + A A + G+IVA+K + GF L C A N A Sbjct: 183 ECGPTLRFRPPSARGYAAPRSGSPMDPVARAWATIARGEIVAVKRLDGFQLICHATNPAA 242 Query: 236 VATLRARKHRPAKPLAVMLPVADGLPDAA-------RQLLTTPAAPIVLVDKKYVPELCD 288 V LR RK RP KPLA+++P +LL + PIV+ + Sbjct: 243 VERLRERKRRPTKPLALLVPKVASAAQWVDLGDASNAKLLASAIRPIVVSRR-------- 294 Query: 289 DIAPDLNEVGVMLPANPLQHLLLQEL-QCP-------------LVMTSGNLSGKPPAISN 334 LN +G MLP+ P+Q+LL P V S NLSG+P + Sbjct: 295 -----LNRLGPMLPSTPIQYLLFHRAQGLPSGTRWLGEAQPTIRVPASANLSGEPLLSDS 349 Query: 335 EQALADLQGIADGFLIHNRDIVQRMDDSVVRES----GEMLRRSRGYVPDALALPPGFKN 390 L IA+ L H+R+IV R DDSVV + LRR+ VP + LP + Sbjct: 350 ADVGEALADIANAVLDHDREIVSRCDDSVVLAAHPLPAITLRRACRSVPKPVPLPT---D 406 Query: 391 VPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV 450 P VL LGA +K+T L G A + +LGDL G+ E ++ TP + Sbjct: 407 GPSVLALGAQMKSTVTLTGGRLADVLPYLGDLRSLGVCELLEETVKHHVFRMHVTPAAIA 466 Query: 451 HDAHPGYVSSQWAREM----NLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGM 506 D P S++ A + ++P + HHHAH AA LAE+ G + L LDG G Sbjct: 467 CDLQPDLYSTRLAETLVDCWSVPLLGIQHHHAHVAAVLAENAHT---GPALGLALDGFGW 523 Query: 507 GENGALWGGECLRVN-YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYS 565 G++G WGGE LRV + LG L + LPG D A WR A PE + S Sbjct: 524 GDDGNAWGGELLRVESGGRAQRLGHLSRLPLPGADAADHASWRMAAALLHTLKPEARRLS 583 Query: 566 ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEAL 625 + L IERG N P + GR+FDA+A G P TL +EGEAA LEAL Sbjct: 584 --PATDSPTTVRLYLQIERGFNCPTRTCLGRWFDAIAGLAGICP-TLHHEGEAAMTLEAL 640 Query: 626 AASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQAT 685 C + L+L ++ + PV A ++H LA A +R Sbjct: 641 --WCTATSRADGWHIDGPNLNLLPLARRLAALRDPVE-IARSWHATLATALADWLRHAMC 697 Query: 686 MRGITTLVFSGGVIHNRLLRARLAHYLADFTLL--FPQSLPAGDGGLSLGQGVIAAARWL 743 I T + RLA A L SLP GD LS GQ A + Sbjct: 698 TTDIDTDRRPWWLPRESRADVRLARCPAQRALHAVRAHSLPPGDDALSYGQAWTAIQQLQ 757 Query: 744 AGEV 747 + V Sbjct: 758 SSTV 761 >UniRef50_Q2RXN2 Hydrogenase maturation protein HypF n=6 Tax=Alphaproteobacteria RepID=Q2RXN2_RHORT Length = 768 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 277/767 (36%), Positives = 366/767 (47%), Gaps = 53/767 (6%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPE-TFLVQLYQH 64 + ++L +RG VQGVGFRP V++LA L L G V N G GV + + F L Sbjct: 20 ATRLRLSVRGLVQGVGFRPTVYRLATGLGLRGFVLNTGAGVVIEVEGARAGEFAEILRHG 79 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP A I+++E S F I S T+I PD A CP+CL+E+ P +RR Sbjct: 80 APPRAHIEALETHRLAASGRDEGFRIIDSDTAAPGTTRIGPDTAPCPSCLSELFDPADRR 139 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 YR+PFI C CGPR TI A+PYDR T M F LC AC +Y DP RRFHA+ ACP+ Sbjct: 140 YRHPFIACCDCGPRHTIAGALPYDRARTAMGGFALCAACAADYADPASRRFHAELTACPD 199 Query: 184 CGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 CGP L + +++ G IVA+KG+GGF L CDA V LR K Sbjct: 200 CGPRLTLDPAD-----------ILREIRAGAIVALKGLGGFQLICDASQPAPVERLRRGK 248 Query: 244 HRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVLVDKKYV--PELCDDIAPDLN 295 R AKP A+++ + A + LT+P PIVL+ ++ P L IAP L+ Sbjct: 249 RRDAKPFALLVASLTDARALCDVRSAEAEALTSPERPIVLLHRRADARPPLAAAIAPGLD 308 Query: 296 EVGVMLPANPLQHLLL-QELQCP-------------LVMTSGNLSGKPPAISNEQALADL 341 +GVMLP PLQ+L+ + P LV TS N +G P + + A+L Sbjct: 309 TLGVMLPVTPLQYLIFHEAAGRPAGTAWLDQPTPLVLVATSANRAGAPLILEGAEVAAEL 368 Query: 342 QGIADGFLIHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPPGFKNVPPVLCLG 398 D H+R I+ R DD VVR G+ +RR RG P+ + + +PPVL LG Sbjct: 369 GADVDVLADHDRPILARADDGVVRVLGDQARSVRRGRGQTPEPI---VLGRALPPVLALG 425 Query: 399 ADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYV 458 A KN+ C+ RG++A LSQH+GDL R A+ + D P V HD HP + Sbjct: 426 AQWKNSVCVTRGDRAFLSQHIGDLDSRATLAFQRAAIDQLMRFVDTRPVVVAHDLHPDFA 485 Query: 459 SSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECL 518 SS+ A M LPT + H A A G ++ L LDG G+G++G WGGE L Sbjct: 486 SSRLAEAMGLPTIAI---QHHHAHLAAVAAEHHIDGPLVGLALDGFGLGDDGGAWGGELL 542 Query: 519 RVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVL 578 R++ LG L +ALPGGD AA+QPWR + R + + + Sbjct: 543 RLDGDGFVRLGHLAPLALPGGDAAARQPWRMAASALARLGRGDE--IVRRFAHRPEAGQI 600 Query: 579 ARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM 638 A + R +SCGR+FDA A LG + YEGEAA LEALAAS + Sbjct: 601 AALLARPDTLGQTTSCGRWFDAAAGLLGLCDE-VRYEGEAAMRLEALAASPRIAAEGWRI 659 Query: 639 PRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGV 698 + + A FH L + +GG Sbjct: 660 SQGVL----DLLPLLDRLSRLDAGAGAGLFHGTLVAALVDWALPAIHACPGARVALAGGC 715 Query: 699 IHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 + NR L L A T L P+ PA DGGL+LGQ +A RWL Sbjct: 716 LINRSLAEGLITTFAARGITALLPRQSPANDGGLALGQAYLAGLRWL 762 >UniRef50_D1PPE4 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE4_9FIRM Length = 634 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 241/648 (37%), Positives = 309/648 (47%), Gaps = 39/648 (6%) Query: 116 MNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFH 175 M P RRYRYPFINCT CGPRF+IIR +PYDRP T MA F +CP C EY D RR+H Sbjct: 1 MQDPHGRRYRYPFINCTDCGPRFSIIRRLPYDRPATTMAGFAMCPDCAAEYGDIRSRRYH 60 Query: 176 AQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 AQP CP CGP + + A L GKIVA+KG GG HLAC A + +A Sbjct: 61 AQPNCCPVCGPRAIYRDAAGKPVAGDPIALAQKALAAGKIVAVKGTGGIHLACRADSPDA 120 Query: 236 VATLRARKHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDD 289 VA LR RKHRP KPLA+M + LL +P PI+L+ KK Sbjct: 121 VARLRRRKHRPEKPLALMARDLSTAARFCRYTEEEAALLQSPRRPILLLAKKDPTGQTWL 180 Query: 290 IAPDLNEVGVMLPANPLQHLLLQE-LQCP--LVMTSGNLSGKPPAISNEQALADLQGIAD 346 A +GVMLP PL LLL P LVMTS N SG P + NE A++ LQGIAD Sbjct: 181 SA--TTRLGVMLPYTPLHILLLDGTFGGPDLLVMTSANRSGCPVLLDNEDAVSALQGIAD 238 Query: 347 GFLIHNRDIVQRMDDS---VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 GFL+H+R I R DDS V R + RRSRGY P L L VL GA+ K Sbjct: 239 GFLLHDRPIANRCDDSLAMVWRGAPVFFRRSRGYAPQPLLLDRDVTG---VLAFGAEQKG 295 Query: 404 TFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWA 463 +F RG A +SQ++GDL + + AL +++ P +V D HP Y S++ A Sbjct: 296 SFAAGRGRHAFVSQYIGDLKNAETLDHYCTALTGTLSLFGLQPTVLVCDLHPDYASTREA 355 Query: 464 RE----MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519 E +LP + V HH AH AAC+A+++ G V L DG G+GE+G++WGGE L Sbjct: 356 EEMAARQHLPLRRVQHHWAHMAACMADNRLE---GPVFGLIWDGTGLGEDGSIWGGEYLV 412 Query: 520 VNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLA 579 +Y+ +G L VALPGGD R L+ L A+ + Sbjct: 413 GDYQHYHRVGSLRPVALPGGDACIAGIGRTALSLALDAG------CPEAAPAFARREGVT 466 Query: 580 RAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPVTM 638 ++ G +S GR FD V + L Y+G+A LEALA + Sbjct: 467 ALLKSGYRCVQSSGMGRLFDGVYSLLT-GRTDADYDGQAPALLEALAEGADPADLYSPAY 525 Query: 639 PRVDNQ--LDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGIT--TLVF 694 D D + + A Q + +Q +V Sbjct: 526 YEEDGVRRFDTRPLIRALCAAKTAGTGAAAL-AAGFQQALCRMALDQCRTLNPDGLPVVL 584 Query: 695 SGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 SGGV NR L + L A + + + + D GL+LGQ I AA Sbjct: 585 SGGVFLNRALLEGVTALLEGAGYRVYTHRRVSPSDEGLALGQLAIGAA 632 >UniRef50_B5IPB6 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPB6_9CHRO Length = 837 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 281/814 (34%), Positives = 381/814 (46%), Gaps = 83/814 (10%) Query: 7 CGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQ 63 + L RG VQGVGFRPFV +LA+ L+L G+V N V V L+ + E FL +L Sbjct: 4 ARLLLHCRGTVQGVGFRPFVHRLARALDLVGEVENVAGAVRVDLQGERPALEQFLGRLGS 63 Query: 64 HCPPLARIDSVEREPFIW-SQLPTEFTI-----RQSTGGTMNTQIVPDAATCPACLAEMN 117 P AR++ ++ S+ P I R G + +V D A CPACLAE+ Sbjct: 64 ELPAPARLEPLQPRWLPPLSRPPRAVRIAAAAPRPLGAGLIAQALVADRAPCPACLAELA 123 Query: 118 TPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQ 177 P +RR+ YPFI+C CGPR++I A P+ R T +AAFPLC AC E+ DP DRRFHA+ Sbjct: 124 DPTDRRHGYPFISCAACGPRYSIATAEPFARAHTTLAAFPLCAACRSEFEDPADRRFHAE 183 Query: 178 PVACPECGPHLEWVSH--GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNA 235 + CP CGP L+ ++ + AA L+ G I+A++G+GGF L +A A Sbjct: 184 TIGCPACGPRLQLLAAAPDTLPAGRDPIAAAADLLRAGGILALQGVGGFQLLVEATRQEA 243 Query: 236 VATLRARKHRPAKPLAVMLPVADGLP------DAARQLLTTPAAPIVLVDKKYVPEL--- 286 V LR RK RPAKP A+++ L +A +LL +PAAPIVL+ +++ P+ Sbjct: 244 VQRLRRRKSRPAKPFALLVADPAWLEPQVRIGEAEIRLLRSPAAPIVLLRRRHDPQALQG 303 Query: 287 ------CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALAD 340 + +AP +GVMLPA+PL LL+ + PLV TSGN SG+P I +A Sbjct: 304 PAAMVVAEAVAPGSPALGVMLPASPLHRLLVAAVGRPLVATSGNPSGEPLCIDPLEARQR 363 Query: 341 LQGIADGFLIHNRDIVQRMDDSVV---RESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 L GIAD FL+HNR I + +DDS+V +LRR+RG+ P AL LP L L Sbjct: 364 LAGIADAFLLHNRPIARPLDDSLVQLIDGRPVLLRRARGHAPAALDLPLPPPADHAALAL 423 Query: 398 GADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDF------------- 444 G DLK L RG Q ++ + GDL+ Q + L + Sbjct: 424 GGDLKAAPALARGGQIWVAPYQGDLAGARQQRAVEQGLDELLQTLGLGGAPPDGDSPVGA 483 Query: 445 TPQYVVHDAHPGYVSS----QWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALT 500 + +V DAHPGYV + + A+ Q V HH AH A AEH G ++ Sbjct: 484 SAPLLVADAHPGYVGTALAARLAQRYGTALQHVQHHRAHGLAVAAEHGL---AGPLLVWA 540 Query: 501 LD--GIGMGENGALWGGECLRVNYRE-CEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF 557 D G G G LWGGE L ++ + L L LPGG+ A ++ R L L Sbjct: 541 ADGLGYGPGPGPQLWGGELLLLDGAGAAQRLACLRPWPLPGGERAMRECRRTALGLLLAA 600 Query: 558 VPEWQNYS----ETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLS 613 P ++ + +LA A+ G NAP ++ GR FDAVA+ L S Sbjct: 601 DPALLHHPGAAACRGAFSPAERQLLAAAVAGGCNAPRTTALGRLFDAVASLLDVLQE-QS 659 Query: 614 YEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFW-----------QQWLNWQ---- 658 YEGEA LE LA ++ + L WL+W+ Sbjct: 660 YEGEAGLRLEGLARRRDQAAENPSLAAEEPVGALLPLVPVPPAEAPDLPLGWLDWEPLLR 719 Query: 659 ---------APVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLA 709 A A FH AL A A + G + +GG N LL Sbjct: 720 RLLDALAAEAAPESLASGFHHALTASLVAAAARAAELSGCRRVALAGGCFQNALLLEGCI 779 Query: 710 HYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAAR 741 L A + + LP DGGL+LGQ R Sbjct: 780 AGLRRAGLQPCWSEQLPCNDGGLALGQLWAVLPR 813 >UniRef50_A4CGN1 Transcriptional regulatory protein; HypF n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CGN1_9FLAO Length = 577 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 185/583 (31%), Positives = 270/583 (46%), Gaps = 45/583 (7%) Query: 188 LEWVSHGEH---AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKH 244 + ++ A + A+ I + GKI+AIKGIGG+ L CDA N A+ TLR RKH Sbjct: 1 MALWNNKGQKIEANTQLAIDKIIRFWEEGKIIAIKGIGGYLLTCDATNPKAIQTLRKRKH 60 Query: 245 RPAKPLAVMLPVADGLPD------AARQLLTTPAAPIVLV--DKKYVPELCDDIAPDLNE 296 RP+KP A M P + + +Q+LT API+L+ KK V DIAP LN+ Sbjct: 61 RPSKPFACMYPNINKIEQDCYVDSTEQQMLTGEVAPILLLQLRKKSVDIALSDIAPGLNQ 120 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 +GVMLP PL LL+Q P+V TSGNLS +++ ++L GI D L ++R+IV Sbjct: 121 IGVMLPYTPLYLLLMQAFGKPIVATSGNLSNASIVFEDKKIFSELSGIWDFALTNDREIV 180 Query: 357 QRMDDSVVRESG-----EMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 DDSV+R S ++RRSRG P+ +L LGA K+ F L+ G Sbjct: 181 TPQDDSVMRFSPFKKQPILIRRSRGVAPNYFWPDIP-TEQKTILALGASQKSAFGLLFGG 239 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN---- 467 LSQ+LGDL+ + + N+ + P+ ++ D HP Y S+++ + + Sbjct: 240 LFYLSQYLGDLTYLESAENLKRTIEHFVNLLNCKPEVILVDKHPDYYSTEYGKHLRDANR 299 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 + HH AH A L+EH V+ + DG G G + +WGGE L ++ + Sbjct: 300 TKLVYIQHHFAHFAGVLSEHSLLQKSKRVLGIVWDGAGYGNDRNIWGGEFLVYENKKIKR 359 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETA-SVQQQNWSVLARAIERGI 586 L + V L GD A +P + L+ + W + R +++ Sbjct: 360 LSHIAYVPLILGDKMAGEPRLSALSH---SGQNPAILPLLKDKFSTKEWKIYQRLLDK-- 414 Query: 587 NAPL--ASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQ 644 P SS GR FDAVA LG T +YEGEAA LE +A + D Q Sbjct: 415 -TPPLKTSSMGRLFDAVACLLGI-MDTQTYEGEAALRLETMAQTYFDRHEDTLDSGYDTQ 472 Query: 645 LDLA------TFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFS 695 + + + ++ A+ FH +L + + E I + FS Sbjct: 473 ISYLDGISTMPIIEGVVKDLNNGTAKDEIAFKFHYSLVKMVEEIALE----NTIEKIAFS 528 Query: 696 GGVIHNRLLRARLAHYLAD-FTLLFPQSLPAGDGGLSLGQGVI 737 GGV N LL L +L + F L F Q + D G++LGQ Sbjct: 529 GGVFQNGLLVDLLMMHLENRFQLYFHQQVSPNDEGIALGQLAY 571 >UniRef50_B6G9X9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9X9_9ACTN Length = 1042 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 191/469 (40%), Positives = 234/469 (49%), Gaps = 73/469 (15%) Query: 10 QLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLR---EDPETFLVQLYQHCP 66 ++ I G VQGVG RPFV++ A + + G V N GDGV + E F+ L P Sbjct: 5 RIHITGIVQGVGMRPFVYRQATEHGVTGWVLNAGDGVHIEAHAEGGALEAFVHSLRDQAP 64 Query: 67 PLARIDSVER----------------------------EPFIWSQLPTEFTIRQSTGGTM 98 A++D+V+ E Q F I S T Sbjct: 65 AAAQVDTVDVAFFDKAEEPIVEPDASTLEPAADVRPGAEAVHPLQAEPRFRIIASQDETE 124 Query: 99 N-TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFP 157 + T + PD ATC CL E+ P +RRY YPFINCT+CGPRFTIIR +PYDR T M AFP Sbjct: 125 HSTLVSPDIATCDDCLRELFDPSDRRYHYPFINCTNCGPRFTIIRGLPYDRAQTSMGAFP 184 Query: 158 LCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGE--------HAEQEAALQAAIAQ 209 +CPAC EY DPLDRRFHAQP AC CGPH+ W G +A + Sbjct: 185 MCPACASEYADPLDRRFHAQPDACFACGPHITWQERGGREALVGATRETSDAIIARCAEL 244 Query: 210 LKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAD------GLPDA 263 + IVAIKG+GGFHLAC A + AV LRARK R KPLA+M D + Sbjct: 245 IASDGIVAIKGLGGFHLACRADSERAVRELRARKRRSNKPLAIMARDLDAAGALCHVGPK 304 Query: 264 ARQLLTTPAAPIVLVDKK---------YVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 R LL PIVL+ ++ L +A DL E+G+MLP PLQHLL+ E Sbjct: 305 ERDLLYGSIKPIVLLQRRGSMSGENPPSSSGLASSVAFDLPELGIMLPYTPLQHLLMAEC 364 Query: 315 QC----PLVMTSGNLSGKPPAISNEQALADL--QGIADGFLIHNRDIVQRMDDSVVRESG 368 + LVMTSGNLS +P + N A A L GIAD L ++R I+ R DDSVVR Sbjct: 365 RVRGIDALVMTSGNLSEEPIEMDNGAAWARLVESGIADALLGNDRAILSRFDDSVVRAVN 424 Query: 369 ---EMLRRSRGYVPDALALPPGF---------KNVPPVLCLGADLKNTF 405 + +RR+RGY P LALP P GAD K T Sbjct: 425 GQVQFVRRARGYAPRPLALPNSEGHGAARRTQDTRPAREAEGADAKATI 473 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 3/127 (2%) Query: 509 NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQC--LRFVPEWQNYSE 566 +G +WGGE L + + L LPGG + + P RN A + Sbjct: 724 DGTIWGGEVLLASLSSFDRAAHLEPWPLPGGAASVRDPRRNAFALLKHYDLLDHPGAAPL 783 Query: 567 TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALA 626 ++Q + +R IERGIN PL SS GR DAV+A LG + +YEGE A LEA A Sbjct: 784 LDTLQPDEKELASRMIERGINCPLTSSMGRLLDAVSAILGIC-HSATYEGEPAILLEAAA 842 Query: 627 ASCHGVT 633 Sbjct: 843 HRFTRHY 849 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 49/143 (34%), Positives = 62/143 (43%), Gaps = 13/143 (9%) Query: 378 VPDALALPPGFKNVP-PVLCLGADLKNTFCLVRGE-----QAVLSQHLGDLSDDGIQMQW 431 P + N P VL G + K T L R + Q +SQH+GDL + W Sbjct: 506 APTGPSGYEPRDNRPLCVLACGPEQKATLALTREDGTGGAQCFISQHIGDLENAETFDAW 565 Query: 432 REALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----NLPTQTVLHHH---AHAAACL 484 + A M+ ++D P + D HPGY+SSQWARE LP V HHH A A Sbjct: 566 QSARARMEGLFDLRPSALTCDVHPGYLSSQWAREQARATGLPLVQVQHHHAHIAAVIAEA 625 Query: 485 AEHQWPLDGGDVIALTLDGIGMG 507 A VI + DG G G Sbjct: 626 AARGEIEANARVIGIAFDGTGAG 648 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 5/120 (4%) Query: 626 AASCHGVTHPVTMPRVDNQLDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMRE 682 A ++P + + L+ A Q AW H A+ + A E Sbjct: 917 ATPTDNEPLGKSLPSTATSISMQPLLLHILDGIAQGASPEQLAWDTHRAIVEITARTAVE 976 Query: 683 QATMRGITTLVFSGGVIHNRLLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 + G+ T SGGV NRLL ++ L A T+L P+ LP DGG++ GQ +A A Sbjct: 977 ISNSTGVRTAALSGGVFMNRLLLEGISVELERAGLTVLTPRDLPCNDGGIAYGQAAVARA 1036 >UniRef50_B5YK99 [NiFe] hydrogenase maturation protein HypF n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK99_THEYD Length = 830 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 137/461 (29%), Positives = 218/461 (47%), Gaps = 43/461 (9%) Query: 318 LVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR---ESGEMLRRS 374 LVMTSGN+S +P NE+AL L +AD FLIHNR+I R+DDSVVR +RR+ Sbjct: 377 LVMTSGNISEEPIITKNEEALEKLNNVADAFLIHNREIFMRVDDSVVRELEGKIYFIRRT 436 Query: 375 RGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREA 434 RG+VP A+ P + +P V+ GADLKNTF L++ + A++SQH+GD+ + + E Sbjct: 437 RGFVPKAI---PLTEELPEVMGAGADLKNTFTLIKSDYAIMSQHIGDMENLETIEFYEEV 493 Query: 435 LRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWP 490 L ++++Y P V HD HP Y S+ WA+E +P + HH+ H A+ +AE+ Sbjct: 494 LNNLKSVYRTEPSAVGHDLHPMYFSTSWAKEYAEKKCIPAFALQHHYCHIASLMAEYGL- 552 Query: 491 LDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNL 550 ++ + DG G G +G +WG E L ++ + L L ++LPGG+ A K+ R Sbjct: 553 ---NELFGIAFDGTGYGTDGTIWGSEFLYCTVKDFQRLAYLKPISLPGGENAIKECSRIA 609 Query: 551 LAQCLRFVPEWQN----YSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALG 606 L+ E + V ++ + + +PL+S GR FD V++ +G Sbjct: 610 LSLIDDTFGEDMDLIKKLPLYKVVSEEKIRQILKIKRLFQFSPLSSGMGRLFDGVSSLIG 669 Query: 607 CAPATLSYEGEAACALEALAASCHGVT----HPV----TMPRVDNQLDLATFWQQWLNW- 657 ++E EAA ALE+L + +P ++ +D ++ + Sbjct: 670 VCHYN-THEAEAAVALESLIEQGTEFSERDCYPFELVNSLEGEALVIDYKPMIREIVKDF 728 Query: 658 -------------QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLL 704 + ++ +W FH+ + + L G + SGGV N L Sbjct: 729 LKSEAKPIGHSERKRGISFISWKFHNTIVKIILELTEHFRAKFGFDAVGLSGGVFQNAYL 788 Query: 705 RARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743 L L+ ++P+ D +SLGQ I R Sbjct: 789 IRETIKALKKLGIKPLYHVNVPSNDACISLGQAYIVGKRIK 829 Score = 482 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 142/315 (45%), Positives = 185/315 (58%), Gaps = 10/315 (3%) Query: 6 SCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED-PETFLVQLYQH 64 + + I+G VQGVGFRPFV+ LAQ LNL G V N GV + + + E F+ +L + Sbjct: 1 MKRLHIEIKGVVQGVGFRPFVYNLAQHLNLKGFVTNTSKGVTIEIEGERVEEFISKLQNN 60 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRY 124 PPLA+I S+++ + F I +S T T + D + C CL E+ TP +RRY Sbjct: 61 PPPLAKIYSIKKTELSPNN-YKTFEIIESIDETGFTHVSEDVSICEDCLRELFTPTDRRY 119 Query: 125 RYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPEC 184 YPFINCT+CGPR+TI +PYDRP T MA F +CP C EY+DP +RRFHAQP ACP C Sbjct: 120 LYPFINCTNCGPRYTITMKVPYDRPNTTMAVFKMCPECLSEYKDPSNRRFHAQPNACPVC 179 Query: 185 GPHLEWVSHGEHA--EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRAR 242 GP + A E E + AI +K GKI+AI+G+GGFHL CDARN AV LR R Sbjct: 180 GPQVRLFVKEGSALNEIENPIPEAIRVIKEGKILAIRGLGGFHLCCDARNEEAVKELRKR 239 Query: 243 KHRPAKPLAVMLPVADGL------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNE 296 K R KP A+M P + + D R++L + PIVL+ KK L + +A Sbjct: 240 KKRSNKPFALMSPSVEAIEKFCFVSDEERKILISLMRPIVLLRKKPQCNLPEALALKNAY 299 Query: 297 VGVMLPANPLQHLLL 311 +G MLP PL +LL Sbjct: 300 LGFMLPYTPLHYLLF 314 >UniRef50_C8QVV7 (NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV7_9DELT Length = 861 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 169/377 (44%), Positives = 209/377 (55%), Gaps = 21/377 (5%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQH 64 L + G VQGVGFRPFV++LA+Q L G VCN GVE+ L FL L + Sbjct: 4 RWSLALGGLVQGVGFRPFVYRLARQHALAGRVCNSAAGVEIELEGPRPRLVAFLDDLQRQ 63 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQST-GGTMNTQIVPDAATCPACLAEMNTPGERR 123 PP A I+ +ER F I + GG +VPD A C CLAEM P +RR Sbjct: 64 APPAAVIEHLERRELPPV-GEQGFVIADTQCGGPPVAGVVPDLAVCADCLAEMLDPADRR 122 Query: 124 YRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPE 183 Y YPFINCT+CGPR+TII +PYDRP T M F +C C EY DP RRFHAQP ACP+ Sbjct: 123 YLYPFINCTNCGPRYTIIEKIPYDRPHTTMRVFTMCRRCQAEYDDPASRRFHAQPNACPD 182 Query: 184 CGPHLEWVSHGEHAEQEA---------ALQAAIAQLKMGKIVAIKGIGGFHLACDARNSN 234 CGP L VS + + +A A+ +L G+IVAIKGIGGFHLA + + Sbjct: 183 CGPALALVSLNQQRQDKAPPPLAAGPSAVAETRRRLLAGEIVAIKGIGGFHLAVNGADQA 242 Query: 235 AVATLRARKHRPAKPLAVMLPVAD------GLPDAARQLLTTPAAPIVL-VDKKYVPELC 287 AV LR RK RP KPLA+M+ L LL +PA PIVL + + + Sbjct: 243 AVKRLRRRKGRPDKPLALMVRDLATARGLVQLGPMEENLLVSPARPIVLALRQAAALPVA 302 Query: 288 DDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADG 347 +AP +G+ML PL HLLL LVMTS N S +P I N++A L IAD Sbjct: 303 AAVAPGNRRLGLMLAYAPLHHLLLDSELPLLVMTSANPSSEPLCIDNDEACRRLSSIADA 362 Query: 348 FLIHNRDIVQRMDDSVV 364 L+H+R IV+ DDSV+ Sbjct: 363 VLLHDRAIVRGNDDSVI 379 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 192/400 (48%), Gaps = 33/400 (8%) Query: 367 SGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDG 426 + ++RR RGY P L VL +G +LKNT CL +AV+SQHLGDL + Sbjct: 459 APLVIRRGRGYAPGLLPFSHRGAA---VLAVGGELKNTVCLAADGRAVISQHLGDLQNLE 515 Query: 427 IQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAR----EMNLPTQTVLHHHAHAAA 482 + + + + ++ PQ V +D HP Y++S+WAR E LP V HHHAH AA Sbjct: 516 SYRVFGQTIADLSQLFAIQPQVVAYDLHPDYLASRWARQWAAEQGLPAVAVQHHHAHLAA 575 Query: 483 CLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLA 542 CLAE++ G + L LDG G G +G++WGGE L + G L + LPGGDLA Sbjct: 576 CLAENEHQ---GPALGLILDGTGYGPDGSIWGGEILLGDAGGFSRWGHLETMPLPGGDLA 632 Query: 543 AKQPWRNLLAQCLRFV----PEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFF 598 +QPWR L + P +E + + +W L + + IN P SSCGR F Sbjct: 633 VRQPWRAALGFLYQAFAGDIPPLPFLAELQAADKVDWQALLPPLRQNINCPRTSSCGRLF 692 Query: 599 DAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTM-------------PRVDNQL 645 DAVAA G +SYE +AA L A G + + Sbjct: 693 DAVAAMAGGC-QKISYEAQAAVELMQAADGLQGPPFAYRLIENKVTEYGFHGAGGPGVLM 751 Query: 646 DLATFW---QQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR 702 L+ ++ A + + + FH L F A + AT GI T+ +GGV+ N Sbjct: 752 QLSPLVCEVAAAVSAGAGLTEISRRFHATLVDMFTAALVTAATATGIKTVALAGGVMQNE 811 Query: 703 LLRARLAHYL--ADFTLLFPQSLPAGDGGLSLGQGVIAAA 740 +L A L L A + P+ LP+ DGGL+ GQ V+AA Sbjct: 812 VLLAGLKDSLAQAGLAAMLPRRLPSNDGGLAYGQAVVAAT 851 >UniRef50_A7I1N9 [NiFe] hydrogenase maturation protein HypF n=3 Tax=Proteobacteria RepID=A7I1N9_CAMHC Length = 1124 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 117/288 (40%), Positives = 165/288 (57%), Gaps = 12/288 (4%) Query: 9 VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLRED---PETFLVQLYQHC 65 ++ I G+VQGVGFRPF++++A + L G V NDG+GV++ D E F L+ Sbjct: 3 LKFEIAGRVQGVGFRPFIYRIATRFGLKGVVFNDGEGVKIFASADKLKIEKFKKALFAEL 62 Query: 66 PPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYR 125 PPLA+I+ ++ Q T+F I +S + T I+PD A C C E R+ Sbjct: 63 PPLAKIEKIKITE-TLPQNFTDFKIVKSENSQIFTPILPDFAICDDCKMEFYDTKNERFH 121 Query: 126 YPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECG 185 YPFINCT+CGPR +II+A+PYDR T M F +C C+ EY++PL+RR+HA+P++C +CG Sbjct: 122 YPFINCTNCGPRLSIIKALPYDRKNTTMNVFKMCEKCEDEYKNPLNRRYHAEPISCRKCG 181 Query: 186 PHLEWVSHGEH--AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P L + A E ++ A L GKIVA+KG+GGFH+ DA N AV TLR RK Sbjct: 182 PELFLKNMQGKILASGEDGVKKATELLYAGKIVAVKGMGGFHIMADACNFEAVKTLRERK 241 Query: 244 HRPAKPLAVMLPV------ADGLPDAARQLLTTPAAPIVLVDKKYVPE 285 HRP KP AVM + ++L + PI+++ K Sbjct: 242 HRPNKPFAVMCKDENMAKKIAFISPFESKILNSNIKPILILKMKNSQN 289 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 160/378 (42%), Gaps = 17/378 (4%) Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL 419 ++S+ + + LR SRG P FK L LG++LKN F + + +S ++ Sbjct: 752 ENSIFNQKVQFLRTSRGLNPKIFI--SDFKCKGTFLALGSELKNQFAIYKDGLIFISPYI 809 Query: 420 GDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAH 479 GDL + ++ + L++ + Y ++ D HP ++ +++ + HH +H Sbjct: 810 GDLKNIATFDRFLKLLQIFTDTYKLKFDCIIGDLHPNFLHTKYFEKQGFKVIKFQHHFSH 869 Query: 480 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGG 539 LAE+ G + + DG G G +G +WGGE + + + +L GG Sbjct: 870 LVCALAENSLLKSGKKFLGFSFDGTGYGLDGHIWGGEVMIFDEFCFTRVTKFEEFSLIGG 929 Query: 540 DLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFD 599 D A K ++ ++ +F E + + L + +E+ + SS GR FD Sbjct: 930 DNAIKNIYKIAISLIFKFGIEKKAAKFLTKFDKNEVRNL-KILEKK--SIKTSSLGRIFD 986 Query: 600 AVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQA 659 A A + C ++Y+GE+ LE L + + + + ++ ++Q + + Sbjct: 987 AFACVI-CHLDKITYDGESGMNLEKLYIQNYVKFYEFELK--NGEIKFGKVFEQIFSDEP 1043 Query: 660 PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTL 717 V A F + +A+ + + + +V SGGV N+ L R++ A Sbjct: 1044 CVA--ATKFINGIAELISKIALKY-----ENDVVLSGGVFQNKTLMNRISKNFAKIGRKF 1096 Query: 718 LFPQSLPAGDGGLSLGQG 735 P D G++ GQ Sbjct: 1097 YANLENPTNDSGIAYGQL 1114 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 48/79 (60%) Query: 285 ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGI 344 +L +IAP+L+++G+ LP L LL + PL+ TS N+SG+P + + L L + Sbjct: 349 KLAQNIAPNLDKIGIFLPNTGLHLLLFEYFSNPLIATSANISGEPIIFNEDVLLKKLFNV 408 Query: 345 ADGFLIHNRDIVQRMDDSV 363 D +L +NR+I+ DDS+ Sbjct: 409 VDFYLDNNREILTPSDDSI 427 >UniRef50_Q0EZV5 Hydrogenase maturation protein HypF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZV5_9PROT Length = 391 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 191/384 (49%), Gaps = 20/384 (5%) Query: 382 LALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNI 441 +ALP GF+ L LG +LK++ CL+R A LS +GDL + I + + + + Sbjct: 9 VALPAGFEAAAETLALGGELKSSICLIRHGTAGLSVAIGDLEQEDIYRHFLASAESV--L 66 Query: 442 YDFTPQYVVHDAHPGYVSSQW----AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 497 + + D HP Y+S+++ A E++LP Q V HHHAH AA +A++ PLD V+ Sbjct: 67 TACKAEQIAIDRHPDYLSTKYGQQLADELSLPLQQVQHHHAHIAAVMADNNLPLDCKSVL 126 Query: 498 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRF 557 + LDG+G GE+G +WGGE L +YR + +G VA+PGG A +PWRN LA L Sbjct: 127 GIALDGLGFGEDGTIWGGEFLLADYRGFQRVGRFQPVAMPGGAAAIHEPWRNTLAHLLPL 186 Query: 558 VP----EWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLS 613 + + + + +++ + G+NAPLASSCGR FDAVAAA+G + Sbjct: 187 WDTVSTTFSDTDIIRFLNNKPVAMMHSMLASGLNAPLASSCGRLFDAVAAAVGLYRDRVD 246 Query: 614 YEGEAACALEALAASC---HGVTHPVTMPRVDN--QLDLATFWQQWL---NWQAPVNQRA 665 E +AA ALE A++C + + QL+ W + L A Sbjct: 247 CEAQAAIALEQAASTCFDRETARYNYQTSDENGCLQLNWRPMWLELLGDIQNGTDTGVIA 306 Query: 666 WAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSL 723 FH + + T+ SGGV NRL+ L L ++L + Sbjct: 307 ARFHRTIIDALHVTAVSLCRTHRVDTIALSGGVFQNRLISTHLPQALQQDGLSVLQHHQV 366 Query: 724 PAGDGGLSLGQGVIAAARWLAGEV 747 PA DGG+ LGQ V+AAA L +V Sbjct: 367 PAHDGGICLGQAVVAAAIRLKEKV 390 >UniRef50_C3XGS6 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGS6_9HELI Length = 490 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 123/409 (30%), Positives = 185/409 (45%), Gaps = 50/409 (12%) Query: 5 TSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---------REDPE 55 T + + G +QGVGFRPFV LA L+LHG V N + L RE Sbjct: 35 TQYSIHAEVFGMIQGVGFRPFVATLAHVLHLHGFVYNQSGSTLIALHISTQKECKRESIL 94 Query: 56 TFLVQLY--------------------------QHCPPLARIDSVEREPFIWSQLPTEFT 89 F L H P A I S+ + F Sbjct: 95 LFYTALLLACKYTINPGTQDLSIIQKASSILEHTHTPKQAYITSLHITIHTDTAHTQGFH 154 Query: 90 IRQS--TGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYD 147 I +S T + I D C +CL +M R Y YPF+ C +CG R++I+ +PYD Sbjct: 155 ILESNVTQHAIQAHIPLDTKVCESCLKDMRDENSRFYNYPFVACVNCGARYSILHQLPYD 214 Query: 148 RPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAE--QEAALQA 205 R T M+ LC CDK+Y++ ++RRFH +P++C C +E+ + H + A++ Sbjct: 215 RKNTSMSDMALCIDCDKDYKNLVNRRFHTEPLSCNNCAIKVEFYRYNHHEKHYDLDAIKT 274 Query: 206 AIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVML-----PVADGL 260 L IV KG+GGF +AR+ A+ +R+ K+R KP VM L Sbjct: 275 LAKALMQNNIVLFKGLGGFAYIANARSKEALQKIRSIKNRLHKPFVVMANIPTLRTISLL 334 Query: 261 PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL--QCPL 318 LLT+ APIV+V K L ++++ L +GV++P + LL L + Sbjct: 335 TPQLESLLTSKEAPIVIVPKHPQYNLSNEVSS-LQTIGVVIPYTAMLTLLFSYLSPDFAM 393 Query: 319 VMTSGNLSGKPPAIS-NEQALADLQGIAD--GFLIHNRDIVQRMDDSVV 364 + TS N G+ A + + AL + IA+ L +NR+I+ +DDS++ Sbjct: 394 IYTSANNKGEMIATTLHNLALDRIVDIAESLYILDYNREILNCVDDSIL 442 >UniRef50_P45805 Hydrogenase maturation protein hypF1 n=6 Tax=Burkholderiales RepID=HYPF1_RALEH Length = 394 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 121/372 (32%), Positives = 173/372 (46%), Gaps = 19/372 (5%) Query: 386 PGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFT 445 P + PVL GA LKN CL+RG + + S GDL D +++ + + Sbjct: 7 PAGSDHAPVLACGAWLKNAACLLRGAEVLWSPIHGDLGDPANCDALDQSVEQLLDSAHGQ 66 Query: 446 PQYVVHDAHPGYVSSQWAREMN----LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTL 501 Q V HD HP + S+Q A+ + +P V HHHAH AA +AE+ VI L L Sbjct: 67 VQAVAHDLHPDFYSTQLAQRLAARLCVPAVAVQHHHAHIAALMAEYDLR---EPVIGLAL 123 Query: 502 DGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW 561 DG+G+G +G WGGE L V+ E LG L ++ LPGGD+AA++PWR A Sbjct: 124 DGVGLGTDGTAWGGELLWVSPSEWCRLGHLQSLPLPGGDVAAREPWRMAAAALHVLDRTG 183 Query: 562 QNYSETAS-VQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAAC 620 + + V +Q +A +ER +N P +SS GR+FDA A ALG + + A Sbjct: 184 EIGRRYGAVVGEQAARTVAAMLERQLNCPRSSSAGRWFDAAAGALGVSVRQQAEAQAAIA 243 Query: 621 ALEALAASCHGVTHPVTMPRV----DNQLDLATFWQQWLNWQAP-----VNQRAWAFHDA 671 A ++ P + D LDL +Q + A FH A Sbjct: 244 LEALAADYLSALSPPECVGTYVVDQDGVLDLRGLLEQLFALADEGQAGQAARGAALFHVA 303 Query: 672 LAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGG 729 LA+ + A G+ T+ GG N +L A + LA L P+++ GD G Sbjct: 304 LAEALVGWAADAAQGHGLKTVALGGGCFMNGILSASVQAGLAARGLQALLPRAVSCGDAG 363 Query: 730 LSLGQGVIAAAR 741 L+LGQ +AA + Sbjct: 364 LALGQAWVAARQ 375 >UniRef50_Q2W6T0 Hydrogenase maturation protein hypF1 n=3 Tax=Magnetospirillum RepID=Q2W6T0_MAGSA Length = 358 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 109/354 (30%), Positives = 154/354 (43%), Gaps = 11/354 (3%) Query: 388 FKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQ 447 + VPPVL +GA LKN C+ RG +A++S + GDL + + + TP Sbjct: 12 PRAVPPVLAVGAFLKNAVCVTRGAEALISANHGDLGTPEAIAAFEACVEALVAEAGVTPV 71 Query: 448 YVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMG 507 V HD HP + +++A+ ++LP V H A A G VI ++ DG G+G Sbjct: 72 RVAHDLHPDFHCTRYAQSLDLPQVPVQ---HHHAHAAAIAAEHGIEGPVIGVSFDGFGLG 128 Query: 508 ENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSET 567 WGGE L LG L + PGGD AA++PWR + + + Sbjct: 129 PGNQSWGGELLLAEGAHYRRLGHLALLPQPGGDRAAREPWRMAASVLHKLGRGPE--IAE 186 Query: 568 ASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA 627 ++L + ++R +N+P SS GR FDA LG P +E +A ALEAL Sbjct: 187 RFKDIPAAAMLGQMLDRRLNSPETSSAGRLFDAACGLLGLHPI-AEFESQAPMALEALVT 245 Query: 628 SCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMR 687 + + P D LDL + PV + A FH L A + + A Sbjct: 246 APEVL--PTGWILQDGVLDLLPLLACLAHCTDPV-RGANLFHGTLIAAMAKWIGDVAATA 302 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAA 739 G + GG N++L L L L + GD GLSLGQ IAA Sbjct: 303 GTPYVTLGGGCFLNKVLTGGLVDRLTALGLRPLTAAKVSPGDAGLSLGQAWIAA 356 >UniRef50_C4KD95 Hydrogenase maturation protein HypF n=1 Tax=Thauera sp. MZ1T RepID=C4KD95_THASP Length = 447 Score = 321 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 122/448 (27%), Positives = 170/448 (37%), Gaps = 65/448 (14%) Query: 352 NRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGE 411 + + + + + G +P+AL P+L LGA K+ CL+ Sbjct: 14 GASLSSPAASTPIGVALGLPSVGAGGLPEAL----------PILALGAWFKHAACLLEDG 63 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQ----WAREMN 467 +A +LGDL + A + + + HD HP + S++ A + Sbjct: 64 RAQFGPNLGDLDNADACRAVEPAALALLARAATPVRAIAHDLHPDFHSTRVACALAARLG 123 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HHHAH A LAEH D V+ L LDG+G+G +G WGGE L V E Sbjct: 124 VPAIGVQHHHAHVGAVLAEHG-RFDARPVLGLALDGVGLGTDGEAWGGELLWVAGGEFVR 182 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 LG L + LPGGD AA++PWR A + Q ++LA+ + R Sbjct: 183 LGHLRPLRLPGGDRAAREPWRMAAALLHASGRGDE--IARRFPGQPAAALLAQVLARPAL 240 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAA-------------------- 627 +P +SS GR FDA A LG + E EAA ALE LA+ Sbjct: 241 SPPSSSLGRHFDAAAGLLGLC-EVMHNEAEAAIALERLASGTAAPEVTPGDWRICDAGGA 299 Query: 628 -----------------------SCHGVTHPVTMPRVDN--QLDLATFWQQWLNWQAPVN 662 HP + L + Sbjct: 300 LRGQADGARSRTDRGAPAAGSVPQPDDRAHPYAGAQPPGGTLELDLHPLLLRLADEPEPA 359 Query: 663 QRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNR--LLRARLAHYLADFTLLFP 720 + A F LA A + E G T+V SGG +HNR A F +L Sbjct: 360 RGAARFQATLAAALVAWVEEARQRTGCATVVLSGGCLHNRLLADALHAALPARGFEVLGA 419 Query: 721 QSLPAGDGGLSLGQGVIAAARWLAGEVQ 748 + L GD GL+LGQ +A R A + Sbjct: 420 RRLSPGDAGLALGQAWVAMHRLAATKED 447 >UniRef50_C3XHI7 Transcriptional regulatory protein HypF n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHI7_9HELI Length = 542 Score = 313 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/480 (22%), Positives = 162/480 (33%), Gaps = 95/480 (19%) Query: 326 SGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALP 385 S A Q L + L HN I S +R SRG+ P + Sbjct: 85 SSHESAKKATQNLDSIN------LTHNTQINSH------SLSIRAMRISRGFAPLHITSD 132 Query: 386 PGFKNV---------------------------PPVL-------CLGADLKNTFCLVRGE 411 P + GA K++ Sbjct: 133 TINSGNFSSNANHANIPCQSKSHTNNSKTTNLNPKIFHLNTLSAAFGAMQKSSIAFGFHN 192 Query: 412 QAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREM----N 467 ++S ++GDL +R+ Y TPQ ++ D H Y+S+Q A+E+ Sbjct: 193 HIIVSPYMGDLFTPYNVANFRKTYDYFSTNYG-TPQALIADIHNQYISTQIAKEIAKDSK 251 Query: 468 LPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEH 527 +P V HHHAH A L E + + DG GMG++G LWGGE L + ++ E Sbjct: 252 IPLFQVAHHHAHFNALLLESSMKGG----VGVIFDGSGMGDDGTLWGGEFLCGDSKQVER 307 Query: 528 LGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGIN 587 + + GG+ K R + + +S + L + G N Sbjct: 308 ILHFKPFRILGGEKHIKDCKRLAYSYAICNDIAPLKAFIESSYDENERKALQALHDTGFN 367 Query: 588 APLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTH------------- 634 +PL SS GR FD LG LSYE ++ E +A++ + + Sbjct: 368 SPLCSSVGRLFDIAGFILGL--ERLSYEAQSG---ELIASNTLKLAYDILTHKNQTINYN 422 Query: 635 ------------PVTMPRVDNQLDLATFWQQWLNWQ---APVNQRAWAFHDALAQGFAAL 679 P N +D++ + Q + A F D LA Sbjct: 423 TLMQTFSNMPYNPYPFHITQNMIDMSECIEMMFKDQQTSKNSDMIAARFIDTLAYCILES 482 Query: 680 MREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTL--LFPQSLPAGDGGLSLGQGVI 737 ++ G F GGV N L R+ L + FP LP D +S+GQ + Sbjct: 483 LKRI----GTDYAFFGGGVFANYALCIRVKKLLHTHNIKAFFP-KLPCSDYSISIGQLMY 537 >UniRef50_B5H082 Hydrogenase maturation protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H082_STRCL Length = 286 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 125/235 (53%), Gaps = 30/235 (12%) Query: 8 GVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQH 64 ++ ++G VQGVGFRPFV+ LA L L G V N GDGV + P+ F ++ Sbjct: 13 RRRVAVQGLVQGVGFRPFVFALATGLGLSGHVTNTGDGVLAEVEGPPDAVDAFCRRIVSD 72 Query: 65 CPPLARIDSVEREPFIWSQLPTEFTIRQSTGGT-------------------------MN 99 PPLA + +V +E + F I S+ Sbjct: 73 APPLADVAAVRQEEIRATGA-RGFAIAPSSRAGTGRGTDRGTDRGGGRDPDGAGGRGAGR 131 Query: 100 TQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLC 159 T I PD ATC ACLAE+ P +RR+R+PFI CT CGPRFTI+ A+PYDR T MA FP+C Sbjct: 132 TLIPPDTATCAACLAELRNPADRRFRHPFITCTDCGPRFTIVTALPYDRAHTTMAGFPMC 191 Query: 160 PACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHG-EHAEQEAALQAAIAQLKMG 213 AC +EY DP DRRFHAQPV+C +CGP L ++ G + AL A L G Sbjct: 192 RACAREYADPADRRFHAQPVSCHDCGPRLTLIAPGAPRRTGDTALVEARRLLAAG 246 >UniRef50_B4WNN4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNN4_9SYNE Length = 295 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 23/269 (8%) Query: 466 MNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR----VN 521 + P HH+AH +C+A+HQ V+ + DG G G+N LWGGE L+ Sbjct: 34 KHTPLVPFQHHYAHILSCMAKHQLK---APVLGVAWDGNGAGKNSTLWGGEFLQPTQDGT 90 Query: 522 YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQ----NYSETASVQQQNWSV 577 E + LPGG+ + +P R+ L E + + + + Sbjct: 91 QYGFERVAHFLPYYLPGGESCSLEPRRSALGLLYGCYGEAAFEMTDLAPIQFFTKSQLTT 150 Query: 578 LARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVT-HPV 636 L + + + +N SS GR FD VA+ L + +EG+AA LE A + +P Sbjct: 151 LQKTLTQKVNVSATSSVGRMFDGVASLLNLHHY-VGFEGQAALTLEFAATQSSTRSVYPF 209 Query: 637 TM-PRVDNQLDLATFWQQWLNWQAPV---NQRAWAFHDALAQGFAALMREQATMRGITTL 692 T+ N +D +Q + A FH+ L + + + + + Sbjct: 210 TVTDTYPNIIDWRETFQSIVEDCRNAVMTPVIAAKFHNTLVEIVVEI----SHRTNNSQI 265 Query: 693 VFSGGVIHNRLLRARLAHYL--ADFTLLF 719 V +G N++L R L FT + Sbjct: 266 VLAGSCFQNKILIERAIRRLSAEGFTPYW 294 >UniRef50_C0QPN6 HypF finger family n=1 Tax=Persephonella marina EX-H1 RepID=C0QPN6_PERMH Length = 709 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 83/370 (22%), Positives = 144/370 (38%), Gaps = 38/370 (10%) Query: 25 FVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLARIDSVEREPFIW 81 F+ Q+A++ + G V + D + + + E F+ +L P + I Sbjct: 22 FIKQVAERNGIKGYVSREDDRILIISQGSEEQLTSFMEELGSKMP-FSIFMRSSSTEVID 80 Query: 82 SQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTII 141 F I+ I + + C CL E P +RR+ YPFI+C +CG ++ + Sbjct: 81 HPEEKGFHIKNEDLN----IIPLNRSVCINCLEESLNPTDRRFFYPFISCNYCGSQYAFL 136 Query: 142 RAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEH----- 196 P++R TV F C C KEY + R+ + ++CP+C + + S + Sbjct: 137 FEYPFEREKTVFKFFHPCENCKKEYENSSSFRYRYELISCPDCFAPVFYRSKSKERIAFT 196 Query: 197 -AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLP 255 E+E A + GK V +K G+ + N + +R + KP+ V++ Sbjct: 197 PEEREKLFNAIAGLVSEGKPVKVKTANGYKVIGTIHEEN-IKKIREIEKTGRKPVTVLIT 255 Query: 256 VADGLPDAAR------QLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 L D A + L++ P+V + K L D+ V L +P+ Sbjct: 256 DISKLDDIAYVNDTQIKALSSQERPVVKLQAKDAF-LERDLVSQTGFVNFKLVDDPVLSF 314 Query: 310 L---LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 + L+E P + + +L I DG L H+ IV D+ V Sbjct: 315 IAFFLKERGIPYIF----------IHDISE--DNLDKINDG-LDHDVPIVNIQKDTEVFT 361 Query: 367 SGEMLRRSRG 376 G+ + G Sbjct: 362 VGDRILIKEG 371 Score = 87.0 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 9/142 (6%) Query: 601 VAAALGCAPAT-LSYEGEAACALEALA-ASCHGVTHPVTMPRVDNQ----LDLATFWQQW 654 ++ LG LSY E A E A V + + LD T + Sbjct: 563 ISVILGAFEQNDLSYFEEPAEIFENKALDYPKRKALKVDFFLYEEEGVFYLDWRTTLRSL 622 Query: 655 LN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHY 711 ++ + +++F + L + + T I LV +G + N +L R+ + Sbjct: 623 MSYKIAGTDIPMLSYSFFEGLGEWIVNQSQTALTKLKINNLVLAGDLFSNPVLTGRILKH 682 Query: 712 LADFTLLFPQSLPAGDGGLSLG 733 L D +L + LP ++ G Sbjct: 683 LPDRNILLNERLPIDVQNIAFG 704 >UniRef50_P39153 Uncharacterized protein ywlC n=123 Tax=cellular organisms RepID=YWLC_BACSU Length = 346 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 14/216 (6%) Query: 189 EWVSHGEHAEQEAA-LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP- 246 +V + + A A L+ ++VA + L +A+N++AV + K RP Sbjct: 6 WFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPS 65 Query: 247 AKPLAVMLPVADGL-------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 PL V + L P+ A+ L+ + L+ L + L V Sbjct: 66 DNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPDALSPRVTAGLETVA 125 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 + +P +PL L++E P+ S NLSGKP E DL G G + Sbjct: 126 IRMPDHPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGG-PTGIG 184 Query: 359 MDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPV 394 ++ +V+ + ++ R P + + P+ Sbjct: 185 VESTVLSCADDIPVLLR---PGGITKEQIEAVIGPI 217 >UniRef50_C0Z824 Putative uncharacterized protein ywlC n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z824_BREBN Length = 359 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 14/225 (6%) Query: 187 HLEWVSHGEHAEQEAA-LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHR 245 + V + + A + A L+ G +VA + L +A ++ AV + K R Sbjct: 8 KVWSVDNDVENQPSCAQIVDAARFLREGAVVAFPTETVYGLGANALSNEAVEKIFTAKGR 67 Query: 246 P-AKPLAVMLP-------VADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNE 296 P PL V + VA +P+ ++L+ P+ ++ K ++ + L+ Sbjct: 68 PSDNPLIVHIGAWDQLSTVASEVPEKGKKLMEAFWPGPLTVILPKTD-QVASLVTAGLDS 126 Query: 297 VGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIV 356 VGV +P +P+ L++E P+ S N SG+P + LADL G G + Sbjct: 127 VGVRMPDHPIALALIKEAGVPIAAPSANRSGRPSPTTAAHVLADLDGRVAGVVDGG-ATG 185 Query: 357 QRMDDSVVRESGEMLRRSR--GYVPDALALPPGFKNVPPVLCLGA 399 ++ +V+ + + R G + + G+ + P +GA Sbjct: 186 VGVESTVIDVTQDPPMILRPGGITREQMEPVIGYVELDPSFQVGA 230 >UniRef50_B0TI69 Sua5/ycio/yrdc/ywlc family protein n=4 Tax=Bacteria RepID=B0TI69_HELMI Length = 422 Score = 227 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 21/230 (9%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + L+ A A L+ G +VA + L DA + AVA + K RP Sbjct: 9 KIWRVDPRQVSAEGLREAAACLQAGGLVAFPTETVYGLGADALQAEAVAAIFTAKGRPSD 68 Query: 248 KPLAVMLPVADGL-------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL V + D + P AR+L P+ LV P++ + L V V Sbjct: 69 NPLIVHIADRDDVARLTVGFPALARRLAERFWPGPLTLVLP-ASPQIPAVVTAGLATVAV 127 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P++P+ L+ E P+ S N SG+P + DL G DG + D + Sbjct: 128 RMPSHPVARALIGEAGTPVAAPSANRSGRPSPTTAAHVWEDLGGRIDGIVDGG-DCDLGL 186 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 + +VV +G++ R PG + LG ++ F R Sbjct: 187 ESTVVDATGDVAVILR----------PGGVTREMIEALGLPVRTAFAAER 226 >UniRef50_A7VH00 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VH00_9CLOT Length = 359 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 E E + A LK G +VA + L DA N A + + K RP PL V + Sbjct: 23 ENEELFRKASDILKSGGLVAFPTETVYGLGGDALNPKASEKIYSAKGRPSDNPLIVHIAD 82 Query: 257 -------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 + A+ L+ P+ ++ KK + + L V + +P++P Sbjct: 83 TASVWELVAEVSTQAQMLMEAFWPGPLTIIFKKKD-IVPHETTGGLETVAIRMPSHPAAM 141 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L+++ + S NLSG+P + DL G D L + ++ ++V +G Sbjct: 142 KLIKDSGVYIAAPSANLSGRPSPTTAAHVEEDLSGRIDMILDGG-PVGIGIESTIVDVTG 200 Query: 369 EMLRRSRGYVPDALALPPGFKNVPPVLCLGA 399 + R P ++ + V+ A Sbjct: 201 DRPTILR---PGYISADMIKNILGDVMIDPA 228 >UniRef50_A0ALM6 Complete genome n=18 Tax=Bacillales RepID=A0ALM6_LISW6 Length = 345 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 13/213 (6%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + ++ Q A L+ G+ VA + L DA N A+ + K RP P Sbjct: 6 WEISKQLSNQSIYQEAAKLLQKGECVAFPTETVYGLGADATNQAAIQKIYTAKGRPSDNP 65 Query: 250 LAVMLPVADGL-------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 L V + + + P A QL+ P+ L+ L +++ L+ VGV + Sbjct: 66 LIVHIARREQMDQFVESYPPKAIQLMEKFWPGPLTLILPLIKDSLAANVSAGLSTVGVRM 125 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P +P+ L++ P+ S N SGKP + + DL G G + ++ Sbjct: 126 PEHPVSLDLIKTANIPVAAPSANRSGKPSPTTAAHVIEDLDGKIAGIIDGG-PTGVGLES 184 Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPV 394 +V+ S E R P + + + PV Sbjct: 185 TVIDCSQETPVILR---PGGITKEQIERVIGPV 214 >UniRef50_A4XJN5 Translation factor SUA5 n=2 Tax=Clostridia RepID=A4XJN5_CALS8 Length = 348 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 82/219 (37%), Gaps = 15/219 (6%) Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AK 248 + + L A LK G +VA + L +A AV + K RP Sbjct: 4 IIDAKGKIDYNK-LSKAAQILKEGGLVAFPTETVYGLGANALLKEAVDKIFVAKGRPQDN 62 Query: 249 PLAVMLPVADGLP-------DAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 PL V + L + +L+ P+ +V K + D++ LN VG+ Sbjct: 63 PLIVHISSKKMLDMCAKVTDERVYKLIEKFWPGPLTIVLPKKE-CIPDNVTAGLNTVGIR 121 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 +P N + L++ P+ S N+SGKP + + DL G D + ++ Sbjct: 122 MPNNKIALELIELAGVPVAAPSANVSGKPSPTEAQHVIEDLFGKVDVIIDGG-KCSFGLE 180 Query: 361 DSVVRESGEMLRRSR-GYVPDALALPP--GFKNVPPVLC 396 +V+ S R G VP ++ + P +L Sbjct: 181 STVIDLSSSKPYILRPGAVPFSILKEILEDIEYDPSILA 219 >UniRef50_C7GYT3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYT3_9FIRM Length = 339 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 11/217 (5%) Query: 197 AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLP 255 + ++ A ++ G VA + L +A + +A+ + K RP PL V + Sbjct: 7 NPDKEGMEKAANIIRTGGTVAFPTETVYGLGANALDPDAIEKIYKAKGRPSDNPLIVHIS 66 Query: 256 VADGL----PDAARQLL----TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 L D + +L P+ LV KK + D + L+ V V +P++ + Sbjct: 67 DISELQGVASDVDKHILAIANEFWPGPLTLVCKKSAD-IPDQVTGGLDTVAVRMPSSSIA 125 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES 367 ++ P+ S N SGKP S + DL G D ++ + D ++ +V+ + Sbjct: 126 REFIRSAGVPIAAPSANKSGKPSPTSTSHVIDDLNGKIDAVIMGD-DSDIGIESTVISVT 184 Query: 368 GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 G + R V + + + L G D + Sbjct: 185 GGKVNVLRPGVIGEVEIRGCLEKSGYKLSSGFDGSAS 221 >UniRef50_B8I564 Sua5/YciO/YrdC/YwlC family protein n=12 Tax=Firmicutes RepID=B8I564_CLOCE Length = 359 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 13/202 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + E AL+ A LK G VA + L +A + AV+ + K RP Sbjct: 4 QVIKIDAENINENALKPAAEALKQGMTVAFPTETVYGLGANALDGIAVSKIFKAKGRPSD 63 Query: 248 KPLAVMLPVADG-------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL V + + +PD A L+ P+ LV KK + +I L+ VG+ Sbjct: 64 NPLIVHIADREKVSELTSFIPDKAVALMDKLWPGPLTLVMKK-SSVIPKEITAGLDTVGI 122 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P +P+ L++ P+ S N+SGKP + + L DL G + + + Sbjct: 123 RMPEHPVALELIKLAGIPVAAPSANVSGKPSPTAAQHVLDDLDGKIEMIVDAGSS-RVGL 181 Query: 360 DDSVVRESGEMLRRSR--GYVP 379 + +V+ S + R G P Sbjct: 182 ESTVLDVSSDPPVLLRPGGVTP 203 >UniRef50_C1DUF6 HypF finger family n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUF6_SULAA Length = 658 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 116/299 (38%), Gaps = 26/299 (8%) Query: 22 FRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPET---FLVQLYQHCPPLARIDSVEREP 78 F P + ++ ++ + G V +G+++ + + + F+ L P + E Sbjct: 19 FLPLIKRIGEKEGIKGYVERTLEGIKIVISSNEDKVKTFMEVLGSKLPVSFFMSDASVEI 78 Query: 79 FIWSQLPTEFTIRQSTGGTMNTQIVP-DAATCPACLAEMNTPGERRYRYPFINCTHCGPR 137 +F I+ I+P + CP+C E+ P +RY YPFI+C+ CG + Sbjct: 79 SEEEITNEDFFIK-----NETLNILPVNYGLCPSCTQELLNPNSKRYLYPFISCSFCGFQ 133 Query: 138 FTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHA 197 ++ + P+DR T+ F +C C +EY R+ +C EC + + E Sbjct: 134 YSYLFYYPFDRKNTIFKYFQMCDNCQQEYDSKFSFRYKYPLTSCYECFIPVSFYEDNEEV 193 Query: 198 ------EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLA 251 L ++ GK + +K + G+ N+ + P K Sbjct: 194 LSLNPQSNLNILLKVAEYIENGKDILLKTLNGYKSISKHFQPNSYILITN----PEK--- 246 Query: 252 VMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + L + +LL + P V + K ++I +LN + P +PL L Sbjct: 247 --ISDIAYLSNKEVRLLASIEKPSVKLQLKEEFSKKENI--NLNFWYLKFPDDPLIVSL 301 Score = 45.8 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 645 LDLATFWQQWLN---WQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHN 701 +D ++ +++ ++ ++ + + +T +V +G + N Sbjct: 562 IDWQKALASLMSYRLAGDNEKIISFSMIESFSEFIENQVSKISTKFNTNNVVITGDFLSN 621 Query: 702 RLLRARLAHYLADFTLLFPQSLP 724 +L R+ +L+ + + LP Sbjct: 622 TVLTGRILKHLSRYNVFTNTLLP 644 >UniRef50_A8F706 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Thermotogaceae RepID=A8F706_THELT Length = 338 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 81/218 (37%), Gaps = 13/218 (5%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + E L+ A +K G +VA + L D N +AV + K+RP Sbjct: 3 TLIKVDPLNPNEGILRKAAQTIKEGGVVAFPTETVYGLGADCFNISAVLKIFQIKNRPAD 62 Query: 248 KPLAVMLPVADGLPDAARQLLT--------TPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL + + L + + P+ + +K + ++ L V + Sbjct: 63 NPLIIHIYDKKQLEELVEGDIEQNSYVMDVFWPGPVTFIFRKKA-NVPKEVTGGLETVAI 121 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P++P+ + L+ P+ S NLSGKP E +ADL G D + + + Sbjct: 122 RMPSHPVAQVFLRLSGTPVAAPSANLSGKPSPTRAEHVIADLYGSVDVIIDGG-ETPLGL 180 Query: 360 DDSVVRESGEMLRRSRGY--VPDALALPPGFKNVPPVL 395 + ++V S + R + + +P L Sbjct: 181 ESTIVDLSRDYPVLLRPGPATIEEIKKIVPNLYIPDFL 218 >UniRef50_C9KMA3 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Veillonellaceae RepID=C9KMA3_9FIRM Length = 352 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 95/256 (37%), Gaps = 18/256 (7%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV- 256 Q L A L+ G +VA + L + ++ A A + K RP PL + + Sbjct: 14 QREELARAGKVLRGGGLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLILHVSDR 73 Query: 257 ------ADGLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 A + A +LL PI L+ ++ + D I L+ VG+ +P +P+ Sbjct: 74 AMVEMIAAEVTPMAEKLLAAFMPGPITLILRRKA-IVPDRITGGLDTVGIRMPEHPVARA 132 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 +++ P+ S N+SG+P + L D+ G L ++ ++V +G Sbjct: 133 MIRAAGVPIAAPSANISGRPSPTTAASVLRDMDGRIPLILDGG-PCHFGVESTIVDCTGP 191 Query: 370 MLRRSRGYVP--DALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL---GDLSD 424 + R + L G + P L + + A + GD + Sbjct: 192 VAVILRPGAITREMLTEVLGGCKLDPALVGADTVPRAPGMKYKHYAPKAPLTLLEGDAAK 251 Query: 425 DGIQMQWREALRLMQN 440 +R +R +Q Sbjct: 252 MAA--AFRRQVRRLQG 265 >UniRef50_C7RH22 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RH22_ANAPD Length = 344 Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 35/257 (13%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + E ++ A L+ G++VAI + L + + A + K+RP P Sbjct: 6 LKIDRENIDEDIIKRAAVLLRRGELVAIPTETVYGLGANGLDEKACLNIFKTKNRPADNP 65 Query: 250 LAVMLPV-------ADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 L + + + + D A++L+T P+ ++ KK + + + + V V P Sbjct: 66 LILHISNKEMLYNLVEDVSDDAKKLMTLWPGPLTMIFKKSE-IIPEVVTAGGDTVAVRFP 124 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 + + +++E P+ S N+SG+P + DL G + D ++ + Sbjct: 125 VDEIARRIIEEANIPIAAPSANISGRPSPTNASDCYYDLNGKIPLIIDGG-DCNIGIEST 183 Query: 363 VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ----- 417 V+ S + R P L + +P V LV + S Sbjct: 184 VIDMSEDTPTILR---PGFYTLEYIREILPNVALDD-------ALVDDNKIPKSPGQKYK 233 Query: 418 ----------HLGDLSD 424 ++GD++ Sbjct: 234 HYAPKARMQVYVGDMAS 250 >UniRef50_A8RQH7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQH7_9CLOT Length = 412 Score = 217 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 14/221 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + ++ L+ A + L+ G +VA + L +A + +A + A K RP Sbjct: 5 RIIIEDRNHIKDEELKEAASILRSGGLVAFPTETVYGLGGNALDEDAARKIYAAKGRPSD 64 Query: 248 KPLAVMLPVADG-------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL + + +P+A R+L+ P+ ++ K ++ L+ V + Sbjct: 65 NPLIAHVSCVEEVAPLVKEIPEAGRKLMEAFWPGPLTMIFPKSE-KVPYGTTGGLDTVAI 123 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P +P+ + L+ P+ S N SG+P + + D+ G + + + + Sbjct: 124 RMPDDPVANRLIALAGVPVAAPSANTSGRPSPTTADHVWQDMNGRIEMIIDGG-PVGIGV 182 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNV---PPVLCL 397 + ++V S + R L V P +L Sbjct: 183 ESTIVDVSSAVPSVLRPGAITMEMLAEVLGEVSVDPAILGP 223 >UniRef50_B3DXI5 Putative translation factor SUA5 n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXI5_METI4 Length = 324 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 81/213 (38%), Gaps = 13/213 (6%) Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPL 250 + E + A++ A+ L G++VAI + LA D N AVA + K RP P+ Sbjct: 3 DKEFNLEIKKAIEKAVDLLNKGEVVAIPTETVYGLAADGLNPEAVARIFELKKRPKIDPV 62 Query: 251 AVMLPVAD-------GLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 V LPD AR L + P+ LV KK + D + L G +P Sbjct: 63 IVHCSSLKEVGFYVCDLPDEARILGESFWPGPLTLVLKKKES-IPDIVTAGLPFAGFRVP 121 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 +PL L+Q+ PL S N GK + + + I L ++ + Sbjct: 122 KHPLTLELIQKFGRPLAAPSANKFGKISPTTAQAVYEEFDQIIPFILDGG-PCQVGIEST 180 Query: 363 VVRESGEMLRRSRGYVP--DALALPPGFKNVPP 393 VV + R + + G +PP Sbjct: 181 VVSFAQIPPLLLRFGAISKEEIERKIGPVTIPP 213 >UniRef50_A7HKY2 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKY2_FERNB Length = 331 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 + A LK G +VA + L A N AV + K RP PL V + D + Sbjct: 20 ISYACEVLKSGGLVAFPTETVYGLGATATNPEAVKKIFQVKGRPADNPLIVHVSSVDEIE 79 Query: 262 DAARQ-------LLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQEL 314 + A + PI V KK + ++ L VGV +PA+P+ L+ Sbjct: 80 NIAYLSEKYIDIIKKVTPGPITFVLKKKE-NIPSEVTAGLETVGVRIPAHPVAQKLINCS 138 Query: 315 QCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRS 374 P+ S N SGKP + DL G+ + + + ++ ++V + + Sbjct: 139 G-PIAAPSANRSGKPSPTDANAVIEDLNGLVECIIDAG-ECAFGIESTIVDLTKDFPVVL 196 Query: 375 R 375 R Sbjct: 197 R 197 >UniRef50_D2RFV3 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFV3_ARCPR Length = 289 Score = 214 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAK 248 + E+ L+ +K GK+VA + L +A + NAV L K RP K Sbjct: 3 KIYKVDPRNPDESVLREVAHMIKEGKLVAYPTETVYGLGTNALDENAVKRLFEVKGRPKK 62 Query: 249 PLAVMLPVADGLPDAAR------QLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 P++V++ D + A +L+ PI ++ KK + + +++G+ L Sbjct: 63 PVSVVVSDLDHVERIAEPNETALKLMEKFFPGPITIIVKKKK-VIPPIVTAGTDKIGIRL 121 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P + L + P+ TS N+SGKP E + D G D L + +++ Sbjct: 122 PDYKIPLKLAEFSGVPVTSTSANVSGKPSPTKPEHIMVDFMGKIDAILDAG-ETPLKIES 180 Query: 362 SVVRESGEMLRRSR-GYVPDA 381 +V+ + E R R G +P Sbjct: 181 TVIDTTTEPPRVLRVGALPLN 201 >UniRef50_C6D5G7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Paenibacillus RepID=C6D5G7_PAESJ Length = 356 Score = 214 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 14/211 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGL- 260 L+ A + L+ G++VA + L DARN+ AV + K RP PL V + + L Sbjct: 22 LEEAASLLRDGELVAFPTETVYGLGADARNTTAVEGIFKAKGRPSDNPLIVHIADENQLA 81 Query: 261 ------PDAARQLL-TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P+ A +L+ P+ +V + + L VG+ +P +P L+++ Sbjct: 82 ELVLPYPELAGRLMKELWPGPLTIVLPVRTGAVSPLVTAGLTTVGIRMPDHPAALALIRQ 141 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE-SGEMLR 372 CP+ S N SG+P L DL G G + ++ +V+ +R Sbjct: 142 SGCPVAAPSANRSGRPSPTLAAHVLEDLAGKISGIVDGG-ATGVGLESTVIELPDSNTIR 200 Query: 373 RSRGYVPDALALPPGFKNVPPVLCLGADLKN 403 R P + P + N Sbjct: 201 ILR---PGGITAEQLRSAAPEAVIDAPAAAN 228 >UniRef50_A1S178 Translation factor SUA5 n=2 Tax=Thermoprotei RepID=A1S178_THEPD Length = 366 Score = 214 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 12/222 (5%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + +++ A + L+ G +VA + L +AV + K RP Sbjct: 14 KAKVWRVDPSEPDAKSIEEAASILRKGGVVAFPTETVYGLGAVYHMRDAVIRVFKVKRRP 73 Query: 247 -AKPLAVMLPVADGL-------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEV 297 PL + + + P+A +L P+ +V K + ++ L +V Sbjct: 74 PDNPLILHISSFSQIYTLASEVPEAVHRLAEKFWPGPLTVVLPK-TSRVPYEVTGGLEKV 132 Query: 298 GVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQ 357 V +PA+ + L++ + P+ S NLSG+P + + LADL DG L + + Sbjct: 133 AVRMPAHNVALRLIEAVGDPIAAPSANLSGRPSPTTAQHVLADLGDEIDGVLDAG-ETLY 191 Query: 358 RMDDSVVRESGEMLRRSR-GYVPDALALPPGFKNVPPVLCLG 398 ++ +V+ + + R G VP K P G Sbjct: 192 GVESTVIDLTADPPVLLRPGAVPLEEVEKVLGKVCVPAFARG 233 >UniRef50_B8E005 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Dictyoglomus RepID=B8E005_DICTD Length = 338 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 11/198 (5%) Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AK 248 + L+ A L+ G +VA + L DA N AV + K RP Sbjct: 4 IYKVDKENPDIEVLKKAAQVLEKGGLVAFPTETVYGLGADALNPEAVKKIFIAKGRPPDN 63 Query: 249 PLAVMLPVADGL-------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 P+ V + + + P A +L+ P+ L+ K + D + +VG+ Sbjct: 64 PIIVHVGKKEQVYSLTENVPSIAEKLMEEFWPGPLTLIFYKSN-LVDDVVTAGSPKVGIR 122 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 P N + LL+ P+ S N+SG+P E + DL+ D + D+ ++ Sbjct: 123 QPMNKVALKLLEVFGKPIAAPSANVSGRPSPTKAEHVIEDLEDKIDIIIDGG-DVNFGVE 181 Query: 361 DSVVRESGEMLRRSRGYV 378 +V+ + + R Sbjct: 182 STVLDITTDTPIIYRPGA 199 >UniRef50_A6TK48 Sua5/YciO/YrdC/YwlC family protein n=57 Tax=cellular organisms RepID=A6TK48_ALKMQ Length = 356 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 14/226 (6%) Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP- 246 ++ E + + L A ++ GK VA + L +A +S A+ + K RP Sbjct: 7 IKLEEMNEK-QIDEILTACGEMIREGKTVAFPTETVYGLGANALDSKAINKIFVAKGRPS 65 Query: 247 AKPLAVMLPV-------ADGLPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 PL V + +P+ A++L+ P+ LV +K + +I+ L+ V Sbjct: 66 DNPLIVHVAHRVEVDALVRVIPEKAKKLMAHFWPGPLTLVMEK-SHGIPGEISAGLSTVA 124 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 + +P +P+ L+++ P+ S N SGKP + DL+G D + Sbjct: 125 IRMPVHPIARTLIEKAGVPVAAPSANTSGKPSPTRAAHVIQDLRGKVDAIIAGG-PCDVG 183 Query: 359 MDDSVVRESGEMLRRSR--GYVPDALALPPGFKNVPPVLCLGADLK 402 ++ +V+ + E R G + L G + P L ++K Sbjct: 184 VESTVLDVTEETPMILRPGGVTKEMLEAVIGEVALDPGLYHRGEMK 229 >UniRef50_C1TLJ1 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Synergistaceae RepID=C1TLJ1_9BACT Length = 322 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 83/219 (37%), Gaps = 13/219 (5%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + + A++ LK G +V + L D + AV+ + K RP P Sbjct: 5 IKVDRWNPDREVIDRAVSILKSGGLVGFPTETVYGLGADGLDGKAVSGIFEAKGRPSDNP 64 Query: 250 LAVMLPV------ADGLPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 L + + + D A ++ P+ LV +P + ++ L+ VGV +P Sbjct: 65 LILHVGDPESVRKIAKVDDRADMIMKNLWPGPLTLVLP-ALPIVPPEVTAGLDTVGVRMP 123 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 ++P+ LLQ P+ S N SG+P DL D + ++ + Sbjct: 124 SHPVALALLQACPFPVAAPSANTSGRPSPTDAVTVARDLDDRVDLIIDGG-ATEVGLEST 182 Query: 363 VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL 401 V+ +GE+ R P L++ + + +L Sbjct: 183 VLDVTGEVPVLLR---PGGLSVEVLADLLGEIALPVGEL 218 >UniRef50_C4KYV0 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacillales RepID=C4KYV0_EXISA Length = 336 Score = 212 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 15/220 (6%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVA 257 ++ + L+ G+I+A+ + LA DA N A+ + K RP PL V + Sbjct: 7 NSNEIEEGVRLLQAGEIIAMPTETVYGLAGDAMNDVAIRKIFEAKGRPSDNPLIVHIASI 66 Query: 258 DG-------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 + +P A++L+ + ++ + L+ +G+ +P +P Sbjct: 67 EQTSLFVDSIPPVAKRLMDAFWPGALTIILP-SNGRASSLVTAGLDSIGLRMPNHPAALE 125 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 L+++ L S N SG+P + + DL G G + ++ +VV +G+ Sbjct: 126 LIRKSGLGLAAPSANRSGRPSPTTAQHVADDLNGRIAGIVDGG-PTGIGVESTVVDCTGD 184 Query: 370 MLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVR 409 + R P + + PV L A+L N R Sbjct: 185 TVTILR---PGGVTREEMEAVIGPV-ALDANLSNDEAAPR 220 >UniRef50_Q0SQY3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=Clostridium RepID=Q0SQY3_CLOPS Length = 350 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 14/201 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV----- 256 L+ A +K G I A + L +A + AV + K RP PL + + Sbjct: 18 LEEAAEIIKNGGIGAFPTETVYGLGANALDGEAVKKIFVAKGRPQDNPLIIHIADKKDID 77 Query: 257 --ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 +P A++L+ P+ ++ KK + D + L+ VGV +P + + L++ Sbjct: 78 KYVAEIPKYAQELMDKFWPGPLTIILKKKD-IVSDVTSAGLDTVGVRMPNDEIALKLIEL 136 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRR 373 P+ S N+SG+P E+ DL G D + + ++ ++V +GE L Sbjct: 137 SGVPIAAPSANISGRPSPTDIERCEEDLNGRVDFII-GAKKSEIGVESTIVDATGEHLCV 195 Query: 374 SRGYVPDALALPPGFKNVPPV 394 R P + L V Sbjct: 196 LR---PGGITLEMLKDIDEGV 213 >UniRef50_Q03EK3 Translation factor SUA5 n=78 Tax=Lactobacillales RepID=Q03EK3_PEDPA Length = 340 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV- 256 +Q A +K G++V+ + L DA N AV + A K RP PL V + Sbjct: 6 SSDEIQVAAQAIKAGELVSFPTETVYGLGADATNPEAVKKVYAAKGRPSDNPLIVHVADQ 65 Query: 257 -----ADGLPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + D +++L+ P+ ++ L + L+ PA + L Sbjct: 66 TEVAKFANIDDKSKKLMDQFWPGPLTIILPIKKGALNSIVTGGLDTAAFRNPATQVTIDL 125 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 ++ PLV S N SGKP E L DL G G L + ++ +V+ S Sbjct: 126 IRAAGVPLVGPSANTSGKPSPTKPEHVLHDLDGKIAGVLDDG-ETTIGVESTVLDMSSTT 184 Query: 371 LRRSRGYVPDALALPP 386 R AL P Sbjct: 185 PSILRPGAITEQALAP 200 >UniRef50_C2KZL7 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Firmicutes RepID=C2KZL7_9FIRM Length = 367 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 73/208 (35%), Gaps = 11/208 (5%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 + + A LK G +VA + L + + A + A K RP PL + + Sbjct: 4 KIFGKEGISEAAEILKGGGLVAFPTETVYGLGGNGLDKEAAKKIYAAKGRPSDNPLILHV 63 Query: 255 PVADGL-------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 + + P+ A++L+ P+ LV K + + L V + P N L Sbjct: 64 SSIEEVYPLVKALPEKAKKLMEAFWPGPLTLVLPK-SDLVPKESTGGLETVALRSPENAL 122 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 L++ P+ S NLSG+P DL G +G L + ++ ++V Sbjct: 123 TLSLIRACGFPIAGPSANLSGRPSPTEASHVFEDLGGRIEGILEDG-AVGIGVESTIVDL 181 Query: 367 SGEMLRRSRGYVPDALALPPGFKNVPPV 394 S R L + Sbjct: 182 SENCPTLLRPGAITIEDLEEVLGEKVAI 209 >UniRef50_B8D397 Putative translation factor n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D397_DESK1 Length = 359 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 11/224 (4%) Query: 190 WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AK 248 + L A L IVA + L +AV + K RP Sbjct: 7 ILRTDPLNPSRELLIQAARILLNKGIVAFPTETVYGLGAVIYYEDAVEKIFKAKMRPPDN 66 Query: 249 PLAVMLPVADG-------LPDAARQLL-TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 PL + + D +P+ A L+ P+ L+ + P + + L+ + V Sbjct: 67 PLIIHISTLDMLEEVALNIPEDAYSLINRFWPGPLTLILPR-NPRVPKIVTGGLDTIAVR 125 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 +P +P L+ + P+ S NLSG+P ++ E + DL G D + + ++ Sbjct: 126 MPGHPTALELINVVGYPIAAPSANLSGRPSPVTAEHVIRDLMGRIDAIIDAG-ETFFGVE 184 Query: 361 DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 +VV + R + + LK + Sbjct: 185 STVVNILEDPPTLLRPGAYPVEEIEKVLGRKIAIPDFARGLKYS 228 >UniRef50_A9BIX5 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIX5_PETMO Length = 344 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 14/218 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + +E ++ A +K K V + L + + NAV + K RP Sbjct: 4 KVIDVDPLNIEEEKIKEAAQAIKEDKTVVFPTETVYGLGANGLSENAVRKIFEAKGRPYD 63 Query: 248 KPLAVMLPVADGLPDA---ARQLLTTP----AAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 PL + + + + LL PI V KK + D + + + + Sbjct: 64 NPLILHVSNVRSFLEYTYISYALLEKIERLLPGPITFVLKKRE-VVPDIVTAGKDTLAIR 122 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 +PA+P+ L++ + P+ S N+SGKP +E L D+ G D +I + ++ Sbjct: 123 MPAHPVALKLIEYAEVPIAAPSANISGKPSPTMSEHVLKDMLGKVDYIIIGG-KVEFGVE 181 Query: 361 DSVVRES-GEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 +++ + G++ R P + + ++ Sbjct: 182 STIIDLTQGKIPIILR---PGPIPPEKLKEIFGDIIIP 216 >UniRef50_B0MPJ3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ3_9FIRM Length = 337 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 21/233 (9%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 L A +K G++VAI + LA DA N +A A + K RP PL + + Sbjct: 6 KKPSYEVLCEAAELIKKGEVVAIPTETVYGLAADAYNPDACAKIFKAKGRPQDNPLIIHI 65 Query: 255 PVADG-------LPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 D +P A L + + ++ K + D + L+ V V +P N Sbjct: 66 CDLDMLKNSVKEIPPLALTLAEHFWSGSLTMIFPKKD-IVPDTTSGGLDTVAVRMPDNED 124 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 L++ PL S NLSG P + + AD+ G + + ++ +V+ Sbjct: 125 TLNLIKMCGVPLAAPSANLSGSPSPTTAQHVYADMNGRIPLIIDGG-ECKNGVESTVICF 183 Query: 367 S--GEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 + G ++ R V A L K KN F + V+S Sbjct: 184 TDGGTGIKVLRPGVITAEMLSRFAKTETD--------KNVFAKPDENEKVISP 228 >UniRef50_A6UX18 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Euryarchaeota RepID=A6UX18_META3 Length = 341 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 11/188 (5%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 + ++ A +K G +VA + L DA N +AV + K RP PL + + Sbjct: 4 KILNKNEIEIAANAIKDGDLVAFPTETVYGLGADALNPDAVEKIFKVKGRPIDNPLIIHV 63 Query: 255 PVADG------LPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 + + + A+ LL P+ ++ KK + +L+ V V +P N + Sbjct: 64 NNLEMANKIAHITENAKILLQKFSPGPLTIILKKKE-VVPAITCANLDTVAVRIPNNKIA 122 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES 367 L+++ P+ S NLSGKP + + + DL + + + ++ +V+ + Sbjct: 123 LELIEKANTPIAAPSANLSGKPSPTNIQHIIDDLGDKINYAIEG--ETTIGVESTVLDLT 180 Query: 368 GEMLRRSR 375 + + R Sbjct: 181 EKKPKILR 188 >UniRef50_A7NRM0 Sua5/YciO/YrdC/YwlC family protein n=5 Tax=Bacteria RepID=A7NRM0_ROSCS Length = 355 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 82/232 (35%), Gaps = 14/232 (6%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 A + A A ++ G +VA + L +A + AV + K RP P+ Sbjct: 13 DPSAPDPRIIAEAAAVIESGGLVAFPTETVYGLGANALDERAVTRIFRAKGRPATDPIIA 72 Query: 253 MLPVADGLPDAARQL--------LTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + L AR + P+ LV + P + +++ V V +PA+ Sbjct: 73 HIADLRQLDMLARDIPPVARVLAQRFWPGPLTLVVWRR-PIVPANLSAGRATVAVRMPAH 131 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 P+ L+ P+ S N +P + L DL G D L + ++ SVV Sbjct: 132 PVALALIAAAGVPIAAPSANRFSRPSPTTAVHVLDDLAGCIDLVLDGG-PTLVGIESSVV 190 Query: 365 RESGEMLRRSRGY---VPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQA 413 + + R R V L P P L +G + ++ A Sbjct: 191 DLTTDPPRLLRPGGVTVAALRELLPELIVEPRYLSVGDEAAPAPGMLLRHYA 242 >UniRef50_B8CZ25 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ25_HALOH Length = 364 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 14/210 (6%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 ++ A++ + L+ G++VA + L DA + +AV + K RP PL V + Sbjct: 24 KLKENDAIREGASLLQKGEVVAFPTETVYGLGADATSESAVKKIFKAKGRPRDNPLIVHI 83 Query: 255 PVADGL--------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 D L D R+L+ P+ L+ +K + L V V P NP Sbjct: 84 GEMDQLYDIIKNPLSDTTRRLIKHFWPGPLTLIFEKKET-IPGVTTAGLESVAVRFPDNP 142 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR 365 + L+ P+ S NLSG P E DL+G + ++ +V+ Sbjct: 143 VARALIGLSSVPVAAPSANLSGSPSPTRAEHVFKDLKGRIPFIIDGG-PSSVGVESTVID 201 Query: 366 ESGEMLRRSR--GYVPDALALPPGFKNVPP 393 R G + +A GF P Sbjct: 202 IRSGNPVILRPGGVTREEIAEVTGFSPENP 231 >UniRef50_C8WUG5 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUG5_ALIAD Length = 360 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 14/201 (6%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 L A+ L+ L+ G +VA + L +A AV + A K RP Sbjct: 3 RLTVAGIRHEAQLREMLREPAQSLRRGGLVAFPTETVYGLGANALEEEAVRRIFAAKERP 62 Query: 247 -AKPLAVMLPVADGLP----------DAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDL 294 PL V + L + A +L+ P+ L+ L + P Sbjct: 63 RDNPLIVHIADDAKLRDVIDENQPLHEDAVRLMRAFWPGPLTLLLPAGA-RLAPSVHPGQ 121 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 VGV +P +P+ L+ E P+ S N SG+P + + +ADL G D + Sbjct: 122 PLVGVRMPDHPVARALIAEAGVPVAAPSANRSGRPSPTTPDDVVADLDGRIDWLVDGG-P 180 Query: 355 IVQRMDDSVVRESGEMLRRSR 375 ++ +V+ + R R Sbjct: 181 CPIGVESTVLLLEPDCARILR 201 >UniRef50_Q46E17 Translation factor SUA5 n=4 Tax=Methanosarcinaceae RepID=Q46E17_METBF Length = 367 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 13/245 (5%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 V ++ L+ A A +K G VA + L D N AV + K RP Sbjct: 11 TLVFRVSEENFDSVLERASAIIKRGGTVAFPTETVYGLGADGLNPEAVMKIFEAKKRPPG 70 Query: 248 KPLAVMLPVADGLPDAARQLLTT--------PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL++++ + + AR + + P+ ++ +K + D + L +GV Sbjct: 71 NPLSLLVHSREDVEKVARNIPESAFRLMNAFWPGPLTIILEK-NDIVPDITSGRLKSIGV 129 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P + + L++ PL S NLSGKP ++DL G D L + + Sbjct: 130 RMPDHRVPLDLIKRAGTPLAAPSANLSGKPSPSLAAHVISDLTGRIDAILDGG-EAAIGL 188 Query: 360 DDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADL-KNTFCLVRGEQAVLSQH 418 + +V+ + E R L V P G + K+ + Q + Sbjct: 189 ESTVIDMTVEPPVVLRPGAVSFEELESIIGKVRPGYKNGENGDKSDLSEKKAGQKY-GHY 247 Query: 419 LGDLS 423 + D Sbjct: 248 IPDTK 252 >UniRef50_B2A3I0 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3I0_NATTJ Length = 367 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 88/247 (35%), Gaps = 20/247 (8%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 ++ + + ++ A ++ +VA + L + + A+ + K+RP Sbjct: 3 KFEKVDKIKPDKTIIKQAAGIVRQNGLVAFPTETVYGLGGNGLSPAAIQKIFQAKNRPLD 62 Query: 248 KPLAVMLPVADGL-----PDAARQLL--TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM 300 P+ + L + + P L P+ ++ K + + + L+ V V Sbjct: 63 NPVILHLHSVNQVETLGFPPEEFFFLAEKFWPGPLTMIIPKKN-IVPREASGGLDTVAVR 121 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 +P + + L+QE Q P+ S NLSG+P + DL G D + ++ Sbjct: 122 MPDHNVALALIQEAQVPMAAPSANLSGRPSPTTAAHVELDLSGRIDMIIDGG-TTGVGLE 180 Query: 361 DSVVRESGEMLRRSR-GYVPDALALPPGFKNVPPVLCLGADLKNTFC---------LVRG 410 +V+ S + + R G + L G++ + + Sbjct: 181 STVIDLSEKPYQVLRPGGITAEQLASALDYCQDTFLYTGSEEDYYAEGNQSSCDEMITKD 240 Query: 411 EQAVLSQ 417 + ++ S Sbjct: 241 KNSIKSP 247 >UniRef50_A5VIP8 Translation factor SUA5 n=19 Tax=Lactobacillales RepID=A5VIP8_LACRD Length = 342 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 10/194 (5%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 + + A A +K G++VA + L DA N AV + K RP PL V Sbjct: 2 DTKIFRHGEIAQAAAAIKRGELVAFPTETVYGLGADATNEKAVKNVYLAKGRPSDNPLIV 61 Query: 253 MLPVADG-------LPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + +PD AR+L+ + ++ K L + L V P Sbjct: 62 HVNSIAMVEKYAAEIPDNARKLMDAFWPGSLTIILKIKKGALSKTVTGGLKTVAFRYPDC 121 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 L++E P+V S N SGKP + + DL G G + + ++ +V+ Sbjct: 122 QPTLDLIEEAGVPMVGPSANTSGKPSPTTAQHVYHDLHGKISGIVDNG-PTRVGVESTVL 180 Query: 365 RESGEMLRRSRGYV 378 S + R Sbjct: 181 DMSTDHPVILRPGA 194 >UniRef50_A7E7K5 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E7K5_SCLS1 Length = 459 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 26/228 (11%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKI-VAIKGIGGFHLACDARNSNAVATLRARKHR 245 LE + + A LK I VA + L DA S+AV + K R Sbjct: 31 TLETWELSKDLSALQPIAEAAEYLKTKSIPVAFPTETVYGLGADATRSDAVKGIYKTKGR 90 Query: 246 P-AKPLAVMLPVADG-------------------LPDAARQLLT-TPAAPIVLVDKKYVP 284 P PL + + +P+ + L+ P+ ++ P Sbjct: 91 PSDNPLIIHVCDLTMLRSLLSSTENQSSGADFPEIPEIYKPLIKCFWPGPLTILLPNPSP 150 Query: 285 E-LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQG 343 L ++ L G +P++PL L++ PL S N S KP + E DL G Sbjct: 151 SKLAPEVTAGLQTFGARMPSSPLALSLIRLAGVPLAAPSANASTKPSCTTAEHVYHDLNG 210 Query: 344 IADGFLIHNRDIVQRMDDSVVRESGEMLRRSR--GYVPDALALPPGFK 389 + L ++ +VV + R G D + G++ Sbjct: 211 RIEIILDGG-ACQVGVESTVVDGMCDPPVVLRPGGVSIDEIRGCHGWE 257 >UniRef50_A8MAU3 Sua5/YciO/YrdC/YwlC family protein n=19 Tax=cellular organisms RepID=A8MAU3_CALMQ Length = 358 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 14/229 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + A ++ A + G +VA + L N +A+ + A K+RP Sbjct: 9 RLIKVDAVNPDMALIRIAADVILKGGLVAFPTETVYGLGASTYNDDAIRRIYAVKNRPMD 68 Query: 248 KPLAVMLPVADGL--------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 P V + + L + +L P+ ++ +K + + + L+ V V Sbjct: 69 NPSIVHISSFNQLYEVAEDIPSELEERLKVAWPGPLTVILRK-SSRISEVASCGLSTVAV 127 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +PA+P+ L++E P+ S N+SGKP E + DL G D + + + Sbjct: 128 RMPAHPVALALIRES-TPISAPSANISGKPSPTRAEHVIKDLWGKIDLIIDGG-ETFFGV 185 Query: 360 DDSVVRESGEMLRRSR--GYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 + +++ + + R + + L G VP K Sbjct: 186 ESTIIDYTKKPPVLYRPGPFTVEELRRIFGEIKVPEQALGLGQFKEALA 234 >UniRef50_D1VRM2 Protein Sua5 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VRM2_9FIRM Length = 350 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 88/236 (37%), Gaps = 19/236 (8%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 +S + + + L+ K G +V + L + + AV + K RP P Sbjct: 8 LSEKDIDKDKKELKKITETFKEGGLVVFPTETVYGLGANGLDKEAVKKIYEAKGRPNDNP 67 Query: 250 LAVMLPV-------ADGLPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVML 301 + + +P A++ + P+ ++ KK + ++ L+ V + + Sbjct: 68 SILHIAKTSQLDELVSEIPKIAKKCINNFWPGPLTIIFKK-SDIVPMEVTGGLDTVAIRM 126 Query: 302 PANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDD 361 P+N + +L+ + P+ S N+SG+P + DL G D + + I ++ Sbjct: 127 PSNKIAAKILKNVNLPIAAPSANISGRPSPTKASHVIEDLMGRVDIIVDGGKSI-VGIES 185 Query: 362 SVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 +V+ + + R P + L K + + NT + + S Sbjct: 186 TVLDVTTDPPMILR---PGKVTLEDLQKIDKSI-----GIDNTTIDAKDKSIPKSP 233 >UniRef50_D0BMJ6 Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Granulicatella RepID=D0BMJ6_9LACT Length = 341 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 81/220 (36%), Gaps = 11/220 (5%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML 254 + L A LK G++VA + L A + AV + K RP PL V + Sbjct: 4 QIFHQETLDQAATLLKQGEVVAFPTETVYGLGAIATSQEAVLKVFEAKGRPSDNPLIVHV 63 Query: 255 PVADGL-------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 D + P++A+ L P+ ++ K ++ L V +P + L Sbjct: 64 HSVDHVMDTVEEFPESAKLLAKHFWPGPLTMILKAKPGIYAPALSAGLPTVSFRMPNHEL 123 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 L++++ PLV S N S KP E + D+ G G + D ++ +V+ Sbjct: 124 TLSLIEQVGIPLVGPSANQSTKPSPTRVEHVVEDMDGRIAGIVDGG-DTSVGVESTVIDL 182 Query: 367 SGEM-LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTF 405 + E R V + P + + K T Sbjct: 183 TNEEGPVILRPGVITKEEIEPIIGPLVEYMKTTTGEKVTP 222 >UniRef50_C9LX04 SUA5 protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX04_9FIRM Length = 377 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 11/191 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 AA++ A+ L+ G++VA + L + ++ A A + K RP PL + + Sbjct: 11 PTAAAIEEAVHLLRAGEVVAFPTETVYGLGANGFDAAACAKIYEAKGRPSDNPLILHIAH 70 Query: 257 AD-------GLPDAARQLLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 +P+ A LL P+ LV ++ + D I L VGV +P N Sbjct: 71 RAMLDEVALDVPEMAEHLLAAFAPGPLTLVLRRCA-AVPDRITGGLATVGVRMPENDAAL 129 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L++ PL S N SG+P + E L DL G L ++ ++V +G Sbjct: 130 ALIRAAGFPLAAPSANTSGRPSPTTAETVLEDLAGRIPLILDGG-PCRFGVESTIVDVTG 188 Query: 369 EMLRRSRGYVP 379 E R Sbjct: 189 EAAVILRPGAI 199 >UniRef50_C9RAD4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAD4_AMMDK Length = 338 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 14/237 (5%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + AL+ A L+ G++VA + L A A+ + A K RP Sbjct: 4 KVWRVDPLRPESLALEEAGELLRRGELVAFPTETVYGLGAAATQDEALRRVFAVKGRPAR 63 Query: 248 KPLAVMLPV-------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 KPL + L +P AR+L+++ P+ L+ L + VG+ Sbjct: 64 KPLTLHLADPEEVFRYVKEVPSTARRLISSFWPGPLTLILP-AASGLPPSLTAGGETVGI 122 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P + + L++ PL S NLSG+P LA+L G G L + Sbjct: 123 RVPDHAVAQELIRMAGLPLAAPSANLSGRPAPTKAAHVLAELGGKIAGVLDGG-PTPLGI 181 Query: 360 DDSVVRESGE--MLRRSRGYVPDALALPPGFKN-VPPVLCLGADLKNTFCLVRGEQA 413 + +VV GE ++RR +P+ + G K V P G ++ + Sbjct: 182 ESTVVEVRGEELVVRRVGALLPEEIEERTGIKPLVAPAEGEGRWWLKAPLVLVEGEV 238 >UniRef50_C4FU51 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU51_9FIRM Length = 340 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGL- 260 L A A L+ G++VA + L A AVA + K RP PL V + A + Sbjct: 11 LDEAAALLRRGELVAFPTETVYGLGAIATKEQAVAKVFQAKGRPSDNPLIVHVKDAQQVL 70 Query: 261 ------PDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 P+ A++L+ P+ ++ ++ + V +P L+ Sbjct: 71 DYAAEVPELAKELMERFWPGPLTIILPVKPGVFPANVNNGQDTVAFRMPNQQSALRLIDL 130 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD-IVQRMDDSVVRESGEMLR 372 + PLV S NLSGKP S + + D G+ G + + D ++ +VVR + L Sbjct: 131 VGTPLVGPSANLSGKPSPTSVDHVMQDFDGLIAGVVAGDTDQAQIGVESTVVRPMADRLV 190 Query: 373 RSRGYVPDALALPPGFKNVPPV 394 R P A+ + P V Sbjct: 191 ILR---PGAITQSMLAQVCPNV 209 >UniRef50_C9XS85 Putative uncharacterized protein n=7 Tax=Clostridium RepID=C9XS85_CLODC Length = 353 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 11/188 (5%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML----- 254 ++ L+ GK V + L +A + NAV + K RP PL V + Sbjct: 23 EEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKEE 82 Query: 255 --PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 +A + D A+ ++ PI ++ K + + L+ V + +P+N + ++ Sbjct: 83 VYDLAKDISDKAKLVIEKLWPGPITIILNKKD-IIPYKTSGGLDTVAIRMPSNVIARAII 141 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML 371 +E P+ S N+SG+P + ++ G DG ++ D ++ +V+ + E Sbjct: 142 KEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGG-DSNFGLESTVLDLTEETP 200 Query: 372 RRSRGYVP 379 R Sbjct: 201 MILRPGSI 208 >UniRef50_Q2YBF7 Translation factor SUA5 n=8 Tax=Bacteria RepID=Q2YBF7_NITMU Length = 364 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 75/226 (33%), Gaps = 34/226 (15%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVAD--- 258 + AA A LK G +VA + L + + +AVA + K RP PL V A Sbjct: 9 IDAAAALLKKGGVVAFPTETVYGLGAEVSSPSAVARIFEIKKRPLDHPLIVHFADASRLS 68 Query: 259 ----GLPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 +P A +L P+ L+ + + + + + VG+ +P +P+ LL+E Sbjct: 69 HWAREVPQQAWRLAECFWPGPLTLILPRSRH-VPEKVTGGQDTVGLRVPDHPVALALLRE 127 Query: 314 LQ--CPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML 371 L L S N G + + D L ++ ++V G+ Sbjct: 128 LGPDRALAAPSANRFGHVSPTTAAHVREEFGDELDMVLDGG-PCQVGLESTIVGFEGQTA 186 Query: 372 RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQ 417 R G V +LSQ Sbjct: 187 VILR---------------------PGGIQLAALAEVLDGNVMLSQ 211 >UniRef50_C5CGY8 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGY8_KOSOT Length = 342 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 84/220 (38%), Gaps = 11/220 (5%) Query: 194 GEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAV 252 + + + A L+ G++VA + L +A ++ A + + K RP PL V Sbjct: 9 DTNKPDKGIILRAARYLQKGELVAFPTETVYGLGANALDAKAASKIFEAKGRPQDNPLIV 68 Query: 253 MLPVAD--------GLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPAN 304 + + L D + P+ ++ +K + D + L VG+ P++ Sbjct: 69 HVSSIEMAQELVLDDLNDYKWLVELLWPGPVTIIFRKSR-RIPDIVTAGLPNVGIRFPSH 127 Query: 305 PLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 P+ L++ P+ S NLSG+P + D+ G L+ + ++ ++V Sbjct: 128 PVAQKLIEIAGLPIAAPSANLSGRPSPTDEFHVIEDMDGRIACMLLAG-KTLFGLESTIV 186 Query: 365 RESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNT 404 S R L F ++ + A+ K + Sbjct: 187 DLSRGKPTLLRPGPISVERLKTLFPDLEVPEFVKAEEKYS 226 >UniRef50_UPI00016C0B40 hypothetical protein Epulo_03232 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B40 Length = 334 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 14/206 (6%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 + L+ AI LK G +V + L +A + NAV + K RP PL V + Sbjct: 7 SKTDNLELAINILKNGGLVVSPTETVYGLCANALDENAVENIFKAKGRPADNPLIVHIAS 66 Query: 257 ADGLPDA-------ARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQH 308 L A++L+ P+ L+ K + + +L V + P N + Sbjct: 67 LAMLDQLVAEISANAQKLIDAFWPGPLTLIFKSQN-IIPNKTRANLQTVAIRFPENKIII 125 Query: 309 LLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESG 368 L+++ + PL S N SGKP + ++ + DL G D + + ++ +VV SG Sbjct: 126 ELIKKSKLPLAAPSANTSGKPSPTNIDRVIEDLFGKVDCIIDGG-NCKIGLESTVVDVSG 184 Query: 369 EMLRRSRGYVPDALALPPGFKNVPPV 394 + R R P + K VP V Sbjct: 185 DNARILR---PGFITAAMLEKIVPSV 207 >UniRef50_B0EKC6 Sua5, putative n=3 Tax=Entamoeba RepID=B0EKC6_ENTDI Length = 357 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 82/219 (37%), Gaps = 16/219 (7%) Query: 186 PHLE--WVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARK 243 P+L V + A ++ G +V + L D NA+ + K Sbjct: 13 PYLTTIIVKIDRDNVDSKLITPAAKIIQQGGLVCFPTETVYGLGADVFQPNAINQIFKVK 72 Query: 244 HRP-AKPLAVMLPVADG-------LPDAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDL 294 RP PL + + + + A +L+ + ++ + + +++ L Sbjct: 73 GRPNDNPLICHISDIEMLNKLAAHVSEDAHKLIKRFWPGALTIIFPRNET-VPNEVTAGL 131 Query: 295 NEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRD 354 N VGV +P++P+ + +++ + P+ S NLS KP + DL G + + Sbjct: 132 NTVGVRMPSHPIAYEFIKQCKTPIAAPSANLSTKPSPTIGRHCIDDLNGRIEMIIDGG-A 190 Query: 355 IVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPP 393 ++ +V+ E R P + L + +P Sbjct: 191 CDIGVESTVLLLGNEHPTILR---PGGVTLEMLREVIPS 226 >UniRef50_A6DT40 Sua5 related protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT40_9BACT Length = 322 Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 11/186 (5%) Query: 199 QEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVMLPVA 257 E ++ A LK +VA + L +A + A + K RP PL V + Sbjct: 7 TEENIKKAAEHLKNDNLVAFATETVYGLGANALSPPACEKIFKAKKRPKYDPLIVHIAEI 66 Query: 258 -------DGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 +PD A L P+ LV KK + I L+ V + +PA+PL Sbjct: 67 YQLSDLVKEIPDVALDLAEAYWPGPLTLVFKKTD-LIPSLITSGLDTVAIRMPAHPLALG 125 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 LL E Q P+ S N G S E + L+ D L + ++ ++V S Sbjct: 126 LLSEAQIPVAAPSANPFGYLSPTSAEHVFSQLENEVDIILDGG-ECDWGIESTIVDCSSG 184 Query: 370 MLRRSR 375 R Sbjct: 185 EAILLR 190 >UniRef50_C4GC44 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GC44_9FIRM Length = 504 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 14/253 (5%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVAD 258 + L+ L+ G +VA + L DA N+ + + A K RP PL V + Sbjct: 7 KEILREPGEILREGGLVAFPTETVYGLGGDAENAESSRKIYAAKGRPSDNPLIVHIADFS 66 Query: 259 GLPDAARQLL--------TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 + A++L P+ ++ +K + + L+ V V +P++P+ L Sbjct: 67 QMEAIAQELAPQVRILADAFWPGPLTMIVRK-NDRIPLETTGGLDTVAVRMPSHPVARQL 125 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEM 370 + C + S N SG+P E DL G D + + ++ ++V S + Sbjct: 126 ILSSGCMIAAPSANSSGRPSPTRAEHVADDLSGKIDAIIDGG-PVEIGLESTIVDLSEGI 184 Query: 371 LRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHL--GDLSDDG-I 427 R + L + G +N + + GDL Sbjct: 185 PTVLRPGYINLRMLEEVLGQDHVRMDPGLMEENVSARPKAPGMRYKHYAPRGDLKIVEGA 244 Query: 428 QMQWREALRLMQN 440 E + + Sbjct: 245 ADDVVETINRLSA 257 >UniRef50_C1ADQ5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ADQ5_GEMAT Length = 363 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 11/197 (5%) Query: 188 LEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA 247 + V+ L A L+ G +VA + L +A + +AVA + A K RPA Sbjct: 1 MRVVAVDAVHPDPDVLADAAQILRAGGLVAFPTETVYGLGANALDPDAVARIYAAKGRPA 60 Query: 248 -KPLAVMLPVADGLP--------DAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 P+ + + AD AAR P+ LV + + D ++ + V Sbjct: 61 WNPVIMHVASADMAAGFASHWPISAARLAERCWPGPLTLVVPRADH-VPDIVSAGGDTVA 119 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 + +P++P+ L+ CP+ S N + + + +A L L Sbjct: 120 LRVPSHPVALALITAAGCPIAAPSANRFTQVSPTTAQHVVASLGDRVGLVLDGG-PSTVG 178 Query: 359 MDDSVVRESGEMLRRSR 375 ++ +VV +G+ + R Sbjct: 179 IESTVVDCTGDTVTILR 195 >UniRef50_C4V460 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V460_9FIRM Length = 350 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 15/205 (7%) Query: 200 EAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVAD 258 E + A A ++ G++VA + L + ++ A A + K RP PL + + Sbjct: 11 EKDIARAAALIRDGQLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLILHIADLS 70 Query: 259 GLPDAARQ-------LLTTP-AAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLL 310 L + A LLT PI +V K V + + L+ VGV PA+ + Sbjct: 71 MLNETAEAVPSTAAHLLTAFAPGPITVVVPKAVH-VPPLVTGGLSTVGVRCPAHDIARRF 129 Query: 311 LQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE- 369 ++ P+ S N SG+P + AD+ G L ++ ++V + E Sbjct: 130 IRAAGVPIAAPSANTSGRPSPTAAAMVYADMAGRIPLILDGG-SCSFGVESTIVDCTEEG 188 Query: 370 MLRRSRGYVPDALALPPGFKNVPPV 394 + R P A+ P + Sbjct: 189 RVTILR---PGAVTYEMIAAEFPHI 210 >UniRef50_A6C3T1 Sua5 related protein n=2 Tax=Bacteria RepID=A6C3T1_9PLAN Length = 325 Score = 202 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 11/193 (5%) Query: 196 HAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPA-KPLAVML 254 E +QAA +++G++VA + L +A N AVA + A K RP PL V + Sbjct: 2 KCEISQNIQAAANLIRLGELVAFATETVYGLGANALNPEAVAQIFAVKQRPHFDPLIVHI 61 Query: 255 PVADGLPDA-------ARQLL-TTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPL 306 L + A +L T P+ LV K + D + L+ V + +PA+P+ Sbjct: 62 ASTGQLDELTTEFSSTAEKLASTFWPGPLTLVLPKKK-VVPDLVTSGLDSVAIRIPAHPV 120 Query: 307 QHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRE 366 LL+ Q P+ S N G+ L L ++ +V++ Sbjct: 121 ARKLLEITQLPIAAPSANKFGRLSPTRAVDVAEQLGDEIKLILDGG-PCTVGVESTVIQC 179 Query: 367 SGEMLRRSRGYVP 379 G+ R Sbjct: 180 LGDQPVLLRPGGI 192 >UniRef50_B8PCG4 Predicted protein n=3 Tax=Agaricomycetes RepID=B8PCG4_POSPM Length = 399 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 21/211 (9%) Query: 179 VACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVAT 238 ++ C P + A+Q Q+ + VA + L A ++ A + Sbjct: 15 ISFTSCIPEIT------SVTTLEAIQRGAKQINECQTVAFPTETVYGLGALALDAVAASR 68 Query: 239 LRARKHRP-AKPLAVMLPVADG----------LPDAARQLLT-TPAAPIVLVDKKYVPEL 286 + + K RP PL V + + L+ P+ L+ + Sbjct: 69 IFSTKGRPPDNPLIVHVSSDAMLNTLLPEGYTISRTYEILIRHFWPGPLTLLFPTNPTLV 128 Query: 287 CDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIAD 346 I + V V +P++P+ L+ P+ S N SG+P E DL G Sbjct: 129 PSIITANQPTVAVRMPSHPVARALIALADAPIAAPSANSSGRPSPTRAEHVFKDLDGKLG 188 Query: 347 GFLIHNRDIVQRMDDSVVRE--SGEMLRRSR 375 L ++ +V+ + +R R Sbjct: 189 VILDGG-PCGVGLESTVIDGLHADGNIRVLR 218 >UniRef50_Q9HLC7 Sua5 related protein n=4 Tax=Thermoplasmatales RepID=Q9HLC7_THEAC Length = 352 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 14/229 (6%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-A 247 + + + A+ L+ G V + L A N A + K RP Sbjct: 3 RIIHIDRSDYRRDQIVDAVDALRSGGTVVFPTETVYGLGALASNPEACKKIFIAKGRPSD 62 Query: 248 KPLAVMLPVADGL-----PDAA---RQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGV 299 PL V + + PD + L P+ +V +K + D + L V + Sbjct: 63 NPLIVHISSMEQFFSYSDPDDSYPIEGLNKAWPGPLTVVVRKAQG-ISDVVTAGLPTVAI 121 Query: 300 MLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRM 359 +P +P+ H L++ P+ S N+S +P + A+ L G D + + Sbjct: 122 RMPDDPIAHDLIEMAG-PIAAPSANISTRPSITDSRDAIRFLDGRVDVIIDAG-PTRFGI 179 Query: 360 DDSVVRESGEMLRRSR--GYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 + +++ + R Y + L G V + K Sbjct: 180 ESTIIDITKRPAELLRPGSYAIEDLEPVFGPIVYGDVARGLGEAKIAIT 228 >UniRef50_D1PKX4 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Ruminococcaceae RepID=D1PKX4_9FIRM Length = 339 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 23/229 (10%) Query: 201 AALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVML----- 254 ++ A L+ G++VA+ + +A DARN +AV + K RP PL V + Sbjct: 11 ESIALAAELLRQGELVALPTETVYGIAADARNGDAVRKIFEAKGRPQDNPLIVHICGMDM 70 Query: 255 --PVADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL 311 + +P+ A +L P+ +V + E+ + L+ VGV +P++P+ ++ Sbjct: 71 LQGIVSEVPERALKLAAAFWPGPLTMVMPRGA-EVSEVTCAGLDTVGVRMPSHPVVQAVI 129 Query: 312 QELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEML 371 + S NLSGKP + + LAD+ G L + ++ +VV +GE Sbjct: 130 KASGVAFAAPSANLSGKPSPTNAQDTLADMHGRLPLILDGG-ESAVGVESTVVSVTGEHP 188 Query: 372 RRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCL---VRGEQAVLSQ 417 R P + LG +++ + + ++ + S Sbjct: 189 ILLR---PGYITKEQMEAV------LGEEVQVSPAILEKLKEGEVARSP 228 >UniRef50_B2A977 Predicted CDS Pa_1_8670 n=1 Tax=Podospora anserina RepID=B2A977_PODAN Length = 413 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 13/186 (6%) Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADG------LPDAARQLL 268 VA + L DA +S AV + K RP PL V + +P+ +L+ Sbjct: 69 VAFPTETVYGLGADATSSTAVKGIYTAKGRPSDNPLIVHVSDLSMLSTLSTIPEIYHELI 128 Query: 269 -TTPAAPIVLVDKKYVPE--LCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNL 325 P+ ++ L ++ L G +P +PL L+Q + PL S N Sbjct: 129 SKFWPGPLTILLPVPTSGQLLAPEVTAGLTTFGARMPDSPLARALIQLVGKPLAAPSANA 188 Query: 326 SGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR--ESGEMLRRSRGYVPDALA 383 S +P L DL+G + L D ++ +VV + ++ R G + + Sbjct: 189 STRPSPTKAVHVLEDLEGKIELILDGG-DCAVGVESTVVDGLCNPPVVLRPGGVGIEEIR 247 Query: 384 LPPGFK 389 G++ Sbjct: 248 QVKGWE 253 >UniRef50_C0NCN9 Translation initiation protein Sua5 n=3 Tax=Ajellomyces capsulatus RepID=C0NCN9_AJECG Length = 490 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 82/241 (34%), Gaps = 39/241 (16%) Query: 189 EWVSHGEHAEQEAALQAAIAQLKMGKI-VAIKGIGGFHLACDARNSNAVATLRARKHRP- 246 V + + L A +L+ I VA + L DA S AV + K RP Sbjct: 47 WTVENDRGNPEAKVLLEAAEELRTSDIPVAFPTETVYGLGADATRSAAVQGIYKAKQRPS 106 Query: 247 AKPLAVMLPVADG--------------------------------LPDAARQLL-TTPAA 273 PL V + + +P L+ Sbjct: 107 DNPLIVHVSSREQLQRLLQPHSSSPSQGGYGSRTEGSQQGGKRNFIPPIYEPLISKFWPG 166 Query: 274 PIVLVDKKYVP-ELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAI 332 P+ ++ P L ++ L GV +P++P+ LL+ PL S N S KP Sbjct: 167 PLTIILPNPTPSPLAPEVTSTLRTFGVRMPSSPVARLLIYLADRPLAAPSANASTKPSPT 226 Query: 333 SNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSR--GYVPDALALPPGFKN 390 + + ADLQG + L ++ +VV R G + + PG+++ Sbjct: 227 TAQHVYADLQGRINMILDGG-PCGVGVESTVVDGLLYPPAVLRPGGIGIEEIRACPGWED 285 Query: 391 V 391 V Sbjct: 286 V 286 >UniRef50_A4WKJ1 Translation factor SUA5 n=5 Tax=Thermoprotei RepID=A4WKJ1_PYRAR Length = 358 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 12/230 (5%) Query: 187 HLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP 246 + + + ++ A L+ G IVA + L A + A + K RP Sbjct: 15 SVLLLRTDPTRPDPSVIRTAAGVLRNGGIVAAPTETVYGLFAHAYREDGCAKVFKAKGRP 74 Query: 247 -AKPLAVMLPVADGL-------PDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVG 298 PL V + + D A L PI +V + + L V Sbjct: 75 MDNPLIVHVDTVEMAMAVADIPNDVAEVLRRVWPGPITVVVPSR-GVVARCVTAGLPTVA 133 Query: 299 VMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQR 358 V PA+P+ +++EL P+ S N +G+P + + DL G D + Sbjct: 134 VRAPAHPIPLSIIKELGAPIAGPSANKAGRPSPTTAGHVVEDLDGEVDVVIDGG-PTFFG 192 Query: 359 MDDSVVRESGEMLRRSR--GYVPDALALPPGFKNVPPVLCLGADLKNTFC 406 ++ +++ + R + + L G +VPPV A+ Sbjct: 193 VESTIIDVTKRPPVVLRPGPFTVEELEKLFGPVSVPPVARGLAEADVALA 242 >UniRef50_C9LKV0 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LKV0_9FIRM Length = 350 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 14/212 (6%) Query: 195 EHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVM 253 + + ++ ++ G +VA + L +A + A + K RP PL V Sbjct: 15 DQSYYNDKVKRLGEVIRAGGLVAFPTETVYGLGGNALDKEAAKKIYMAKGRPSDNPLIVH 74 Query: 254 LPVADGLP-------DAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANP 305 + + ++L+ P+ +V K + + L + + PA+ Sbjct: 75 VADISEVSTYVKRILPLEKRLMEAFWPGPLTIVFPKKD-IVPMATSGGLRTIAIRCPAHE 133 Query: 306 LQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVR 365 L++ P+ S N+S KP + + L D+ G + + D + ++ +V+ Sbjct: 134 AARALIRAAGVPIAGPSANISTKPSPTTADAVLHDMDGRIEFVIDGG-DSLIGLESTVIA 192 Query: 366 ESGEMLRRSRGYVPDALALPPGFKNVPPVLCL 397 + R P + P L Sbjct: 193 VENGKIIIYR---PGGITRDMLEAFAPTELDT 221 >UniRef50_D1BN20 Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Veillonella RepID=D1BN20_VEIPT Length = 343 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 14/207 (6%) Query: 197 AEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLP 255 E + L+ G++V+I + L + + A+ + K RP PL + +P Sbjct: 8 NPSEQDIDTLARALRNGELVSIPTETVYGLGANGLDPEAMDKIYTAKGRPSDNPLILHVP 67 Query: 256 V-------ADGLPDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQ 307 + + A+ L+ T P+ + K + D L V + P + L Sbjct: 68 NSESIKPLVTEVSNTAQLLMDTFWPGPLTITLPK-SDLVPDRATGGLPRVALRCPDHELC 126 Query: 308 HLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRES 367 LL+ P+ S N+SG+P + + D++ L ++ +VV Sbjct: 127 RALLERAGVPIAAPSANISGRPSPTTAQDVYHDMKDRISYILDAG-SCTIGVESTVVEVH 185 Query: 368 GEMLRRSRGYVPDALALPPGFKNVPPV 394 + + R P + V V Sbjct: 186 DDKVIILR---PGGITKAQLEDVVSTV 209 >UniRef50_C4KBK6 Sua5/YciO/YrdC/YwlC family protein n=13 Tax=Betaproteobacteria RepID=C4KBK6_THASP Length = 370 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 11/191 (5%) Query: 213 GKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLPDAARQLLT-- 269 G++V + + LA DA + AV + A K RP PL V LP + LP A + Sbjct: 30 GELVGMPTETVYGLAADALDPEAVKKIFAAKGRPADHPLIVHLPSVEHLPQWAAAIPKDA 89 Query: 270 ------TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSG 323 P+ L+ K+ P++ D++ + VGV +PA+P+ LL+ L S Sbjct: 90 LALARAFWPGPLTLILKR-TPDVPDEVTGGQDTVGVRVPAHPVALALLRAFDGGLAAPSA 148 Query: 324 NLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALA 383 N G+ + +L L ++ +++ S ++ R Sbjct: 149 NRFGRISPTTAAHVHEELGERVAMILDGG-ACAVGIESTILDFSRDVPEILRPGAITPED 207 Query: 384 LPPGFKNVPPV 394 + P V Sbjct: 208 IARVIGRRPRV 218 >UniRef50_D1B5Y4 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5Y4_THEAS Length = 330 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 10/186 (5%) Query: 198 EQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPV 256 E AL+ + G++VA+ + L DA N A + K RP P+ V + Sbjct: 11 PSEGALRLGADLILSGRLVAMPTETVYGLGGDATNPEAARRIFQVKGRPLDNPIIVHVSC 70 Query: 257 ADGLPDA------ARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHL 309 ++ + A L P+ LV + + L+ VG+ P++P+ Sbjct: 71 SEEAREVGRMTPLAEDLARAFWPGPLTLVVPSR-GVVPREFLGGLDTVGIRCPSHPVARR 129 Query: 310 LLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGE 369 L++ P+ S N SG+P L DL+G+ L ++ +VV +G Sbjct: 130 LIEISGVPIGAPSANRSGRPSPTDALTVLEDLEGLIPLILDGG-PCEVGLESTVVDVTGS 188 Query: 370 MLRRSR 375 R Sbjct: 189 EPVILR 194 >UniRef50_B9E8F9 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8F9_MACCJ Length = 334 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 88/248 (35%), Gaps = 24/248 (9%) Query: 203 LQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP 261 +Q I K G+ +AI + LA DA N AVA + K RP PL V + L Sbjct: 21 VQEIITGFKAGETIAIPTETVYGLAADATNREAVAAIFKAKGRPQDNPLIVHIHHLSQLE 80 Query: 262 -------DAARQLLT-TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQE 313 AA +L+ PI + L + + LN V V +PA+ + H L++ Sbjct: 81 WFTHDIHAAAYKLMDYFWPGPISFIVPVKQGILAESVTAGLNTVAVRMPAHKVAHQLIEM 140 Query: 314 LQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRR 373 L S N SGKP E + D++G G + + + ++ +VV S R Sbjct: 141 TDLLLAAPSANTSGKPSPTKAEHVIHDMEGKIFGIVQ-SEQVEVGIESTVVDCSQYPFRI 199 Query: 374 SRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWRE 433 +R L + D + A S E Sbjct: 200 ARPGAITHNDLEMVVPGCISDERIMGDKPIAPGMKYRHYAPDSP--------------LE 245 Query: 434 ALRLMQNI 441 + +++ Sbjct: 246 LVEHFESL 253 >UniRef50_D2R349 Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R349_9PLAN Length = 345 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 79/228 (34%), Gaps = 17/228 (7%) Query: 192 SHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPL 250 + + L G++VAI + LA DA N AV + A K RP PL Sbjct: 11 PESPPIVSDEIIARGAQLLAAGELVAIPTETVYGLAADATNPMAVRKIFAAKGRPADHPL 70 Query: 251 AVMLPVADGL-------PDAARQLLTT-PAAPIVLVDKKYVPELCDDIAPDLNEVGVMLP 302 V + D + P AA L P+ ++ ++ + +A L+ + V P Sbjct: 71 IVHIAYPDEIDRWGTEIPPAAWDLAAAFWPGPLTMIVRRR-SNVDSVVAGGLDTIAVRCP 129 Query: 303 ANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDS 362 ++P+ LL+EL + S N G + LA+ + ++ + Sbjct: 130 SHPVAQRLLRELGRGVAAPSANKFGHVSPTTAAHVLAEFGDTLPLVIDGG-ACEVGLEST 188 Query: 363 VVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKN-TFCLVR 409 +V S R L L +G N T C R Sbjct: 189 IVDLSQSTPTILRPGAISQTDLELVLG-----LAIGDPHANSTPCSGR 231 >UniRef50_Q97TF8 HypF homolog n=2 Tax=Clostridium acetobutylicum RepID=Q97TF8_CLOAB Length = 477 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 14/216 (6%) Query: 158 LCPACDK-EYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQE-AALQAAIAQLKMGKI 215 LC C K ++++PL+R FH + + C P L V + +A ++ A LK I Sbjct: 8 LCDRCLKNKHKNPLNRLFHIEEICLKNCIPPLTLVDNKYNAINSLNIIEKAYKLLKSANI 67 Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPD------AARQLLT 269 +AIK GGF+L C+ ++ A+ TLR RK R +KP AVM+ + + +++L Sbjct: 68 LAIKDTGGFYLICNGKSRAAINTLRRRKMRQSKPFAVMMKDIYTVREFCEVHSEEKKVLE 127 Query: 270 TPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLL-QELQCPLVMTSGNLSGK 328 + PIV++DKK L ++I+P+L +GVMLP +P+ L+L ++L ++ S N+ Sbjct: 128 SSERPIVILDKKPSLNLPNNISPNLKSIGVMLPFSPISRLMLQKDLDVLIITKSSNIE-- 185 Query: 329 PPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVV 364 + NE A +L+ IAD FLIHNR+I + VV Sbjct: 186 ---LKNETAFKNLKNIADYFLIHNREISVPLKTPVV 218 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 22/217 (10%) Query: 514 GGECLRVNYRECEHLGGLPAVALPGGDLAAK-QPWRNLLAQCLRFVPEWQNYSETASVQQ 572 GGE +E + V L G K P + ++ F ++ Sbjct: 265 GGEFFIKTNKEFKMAAHFQYVTLQG-----KPSPLSSAISYLHFFKYNPDSFIA------ 313 Query: 573 QNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGV 632 N + A+E+ N+ L SS FFD +++ L +Y GEAA ALE++A + Sbjct: 314 -NTGITTNALEKNSNSCL-SSIDHFFDCISSLLDIVHTN-TYAGEAAQALESIADATTKD 370 Query: 633 THPVTMPRVDN--QLDLATFWQQWLNW---QAPVNQRAWAFHDALAQGFAALMREQATMR 687 + + ++ +D+ + L + + A FH+ + + + + Sbjct: 371 YYKYRIKNENSAFVIDIKNILRGVLIDILIKKEKSMIATKFHNTIYHITCQMALILSKLY 430 Query: 688 GITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQS 722 GI ++ SG N+ L ++ L + + F Sbjct: 431 GINKIILSGTTFQNKRLLEDVSKGLKKENLRVYFNSK 467 >UniRef50_B5Y9H3 Universally conserved protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H3_COPPD Length = 330 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 74/198 (37%), Gaps = 15/198 (7%) Query: 191 VSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKP 249 + +++ ++ A L G +VA + L A N AV + K RP P Sbjct: 3 LKVDPLKPEQSLIRKACQVLLDGFVVAFPTETVYGLGAIATNEEAVRKIFHLKGRPTDNP 62 Query: 250 LAVMLPVADG-------LPDAARQLLT-TPAAPI-VLVDKKYVPELCDDIAPDLNEVGVM 300 L V + +P+ AR+++ P+ V++ K + L V + Sbjct: 63 LIVHVSDLSQVYDLVTEVPEKARKVMEVFWPGPLSVILQAKES--VPLVTRGGLESVAIR 120 Query: 301 LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD 360 +PA+P+ L++ P+ S N SG+P + E D L + ++ Sbjct: 121 MPAHPVALSLIRCAG-PIAAPSANKSGRPSPTTAEHVYQDFGDDV-LILDAG-PTLVGLE 177 Query: 361 DSVVRESGEMLRRSRGYV 378 +VV E + R Sbjct: 178 STVVDVREEPWKIYRPGA 195 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.181 0.652 Lambda K H 0.267 0.0554 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,215,472,978 Number of Sequences: 3077464 Number of extensions: 361182190 Number of successful extensions: 860731 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2067 Number of HSP's successfully gapped in prelim test: 586 Number of HSP's that attempted gapping in prelim test: 847946 Number of HSP's gapped (non-prelim): 3256 length of query: 750 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 614 effective length of database: 621,861,252 effective search space: 381822808728 effective search space used: 381822808728 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 98 (41.9 bits)