147 c3pu5A_ Probab=30.44   E-value=39  Score=14.59  Aligned_columns=249  Identities=13%

Q ss_pred             CCCCEEEEECCCCHHHHH-HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCC--EEEEEECCHHHHHCCCCCCCCCC
Q ss_conf             589879970477089999-999999999779933898436733889999753981--28874021134311666653335
Q batch____        23 AASPVKVGSKIDTEGALL-GNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGEL--DIYPEYTGNGAFFFKDENDAAWK   99 (305)
Q Consensus        23 ~~~~i~ig~~~wte~~vl-a~i~~~~Le~~Gy~ve~~~~~~~~~~~~~al~~Gdi--Di~~eytG~~w~~~~~~~~~~~~   99 (305)
                      +.++|+|.+-+-+....+ -+++...=++.|.+|+.+....+....-..++.|..  ||+.-..+..........-....
T Consensus         2 a~~tl~v~~~gG~~~~~~~~~~~~~Fek~~gi~V~~~~~~~~~~~~k~~~~~~~~~~Dv~~~~~~~~~~~~~~g~l~~~~   81 (322)
T c3pu5A_           2 ADDHIYVTSSGGSFLENVRKHXAEPFEKQSGVKVTLVPGTNPAHALKILSSRGTPPYDVAAFGGNDXYRLIRAKKLAQVD   81 (322)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHTHHHHHHHHCCEEEEEECCHHHHHHHHHHCCSSCSCSEEEECHHHHHHHHHTTCBCCCC
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCCC
T ss_conf             88659999518857898877438999843288899996695899999998348998628997684689999828876300


Q ss_pred             CHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECHHHHHHCCCCCHHHHHHHHHHC---CCCCCCCCCCCCCCCCHHH
Q ss_conf             8788999998510122686883156777720588516676445898488843323201---4532267754345624078
Q batch____       100 NAQQGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEG---GTFKLAASAEFIERADALP  176 (305)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~V~~~~a~~~gi~si~DL~~~~~~~---~~~~~g~~~~~~~~~~g~~  176 (305)
                      .................|-.+.-|..... .+++.++...+++ .+++.||.......   .................+.
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~y~iP~~~~~-~~l~ynk~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (322)
T c3pu5A_          82 EKSVPSLADVPEKFKADWEGCGSLYDYSS-VGIAYRPDKIQGG-VKSWKEFVERTVAGEFGKQVFFNNLSSNVRGAEVLS  159 (322)
T ss_dssp             TTTCGGGGGSCGGGTGGGTTSCEECCBEE-EEEEECTTTSTTC-CSSHHHHHHHHHHTTTTTCEEEECGGGTSSHHHHHH
T ss_pred             CCCCCCCCCCCCCEEECCCEEEEEEEEEE-EEEEECCCCCCCC-CCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf             02333332112201017832278887557-9999535322100-247177645664022375022056741589999999


Q ss_pred             HHHHHHCCCCCC--------------CEEECCCCHHHHHHHHHHHHHCCCCEEEEEECC---CCCCCCCCEEEEECCCCC
Q ss_conf             899982888433--------------202037762567999999975399479996458---866432773897357776
Q batch____       177 AFEKAYGFKLGQ--------------DQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGT---DGPVAALGLQTLSDPQGV  239 (305)
Q Consensus       177 ~l~~~ygl~~~~--------------~~~~~~~~~~~~~a~~~~A~~~~~~~v~~~w~p---~~~~~~~~l~~LeDp~~~  239 (305)
                      .....++.+...              ......+...+.     .++.+|+..+...|+.   .......+......|+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~G~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~g  234 (322)
T c3pu5A_         160 XFGKIYGSGYGDIEASIATLERXKPHIFKFFTAFNDPV-----VLLTSGEGAIGPGWDGRTFIAEDSTKGXVKWVDPTEG  234 (322)
T ss_dssp             HHHHHHSSSTTCHHHHHHHHHHHGGGEEEEECSTTHHH-----HHHHHTSCSEEEEEHHHHHHHHHHTTTSSEEECCTTC
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH-----HHHHCCCEEEEEECCHHHHHHHHHCCCCCEEECCCCC
T ss_conf             98862265646679999999986420133446768999-----9986697546740648999998507886322217986


Q ss_pred             CCCHHHHHEECHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             78002112211478775888999998751367989999999999
Q batch____       240 QPIYAPAPVVRESVLREYPQMAQWLQPVFASLDAKTLQQLNASI  283 (305)
Q Consensus       240 ~p~~~~~~vv~~~~~~~~P~~~~~l~~~s~~lt~e~l~~l~~~v  283 (305)
                      ........+..+.--.+  .+.++++-+   ++.|.+..+....
T Consensus       235 ~~~~~~~~~~~~~~~~e--aA~~fi~~l---~s~e~q~~~~~~~  273 (322)
T c3pu5A_         235 AVSSGPVXAVVKGGKED--LAKAFXNYA---LGEEAQKAFCEAX  273 (322)
T ss_dssp             CEEECCEEEEBTTSCHH--HHHHHHHHH---TSHHHHHHHHHHH
T ss_pred             EEEEEEEEEEECCCCHH--HHHHHHHHH---CCHHHHHHHHHHC
T ss_conf             05200025885489979--999999987---5989999999852