BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (274 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax... 530 e-149 UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment)... 344 2e-93 UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glut... 228 2e-58 UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Ta... 132 1e-29 UniRef50_P10805 Porin thermoregulatory protein envY n=41 Tax=Ent... 130 6e-29 UniRef50_Q04819 ORF11 n=5 Tax=Salmonella enterica subsp. enteric... 127 4e-28 UniRef50_B7M6J8 Putative AraC-type regulatory protein encoded in... 107 5e-22 UniRef50_Q83RF4 HTH-type transcriptional regulator ydeO n=59 Tax... 105 2e-21 UniRef50_B7LQH4 GadW HTH-type(AraC-type) transcriptional positiv... 99 1e-19 UniRef50_P05052 HTH-type transcriptional regulator appY n=6 Tax=... 97 9e-19 UniRef50_B5FRI8 AraC family regulatory protein n=32 Tax=Enteroba... 96 2e-18 UniRef50_Q93SE2 Putative uncharacterized protein n=1 Tax=Escheri... 95 3e-18 UniRef50_P63202 HTH-type transcriptional regulator gadW n=57 Tax... 92 1e-17 UniRef50_C6UHW7 Putative AraC-type regulatory protein encoded in... 88 3e-16 UniRef50_C6UPG2 Putative envelope protein encoded within prophag... 86 1e-15 UniRef50_P41782 Transcriptional regulator hilD n=38 Tax=Salmonel... 85 3e-15 UniRef50_A7ZH67 HTH-type transcriptional regulator YdeO n=2 Tax=... 83 9e-15 UniRef50_Q8Z4A6 Transcriptional regulator sirC n=36 Tax=Salmonel... 82 2e-14 UniRef50_A7XY51 LngS n=3 Tax=Enterobacteriaceae RepID=A7XY51_ECOLX 80 9e-14 UniRef50_Q8GA53 Putative CS12 fimbrial-like upstream regulatory ... 80 1e-13 UniRef50_P43459 Transcriptional activator perA n=24 Tax=Escheric... 77 4e-13 UniRef50_B5R1L9 Fimbrial operon positive regulatory protein n=11... 77 8e-13 UniRef50_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproduce... 76 1e-12 UniRef50_Q8GA34 AraC-like transcriptional regulator n=2 Tax=Esch... 74 6e-12 UniRef50_P68913 Uncharacterized HTH-type transcriptional regulat... 74 7e-12 UniRef50_P32326 Urease operon transcriptional activator n=12 Tax... 74 7e-12 UniRef50_P23774 987P fimbrial operon positive regulatory protein... 73 1e-11 UniRef50_A6AXU3 Transcriptional regulator, AraC family protein n... 71 4e-11 UniRef50_B5ZYE2 Transcriptional regulator, AraC family n=12 Tax=... 70 9e-11 UniRef50_A7ZGX7 Transcriptional regulator, AraC family n=1 Tax=E... 70 9e-11 UniRef50_A2PNS5 Transcriptional regulator, AraC family protein n... 69 1e-10 UniRef50_Q5DYJ4 Transcriptional regulator, AraC family n=1 Tax=V... 69 2e-10 UniRef50_B3C9G8 Sensor protein n=2 Tax=Bacteroides RepID=B3C9G8_... 68 3e-10 UniRef50_D0YX71 Transcriptional regulator AraC family protein n=... 68 3e-10 UniRef50_D1RT58 Transcriptional regulatory protein n=1 Tax=Serra... 68 3e-10 UniRef50_A0Z3Z2 Transcriptional regulator, AraC family protein n... 68 4e-10 UniRef50_A3J4H6 Two-component system sensor histidine kinase/res... 68 4e-10 UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n... 68 4e-10 UniRef50_D0KCL6 Transcriptional regulator, AraC family n=5 Tax=P... 67 5e-10 UniRef50_UPI0000F30067 putative transcriptional regulator AraC/X... 67 5e-10 UniRef50_A6WTM9 Helix-turn-helix-domain containing protein AraC ... 67 5e-10 UniRef50_A6B243 Transcriptional activator of virulence loci n=4 ... 67 6e-10 UniRef50_B2I0Q2 AraC-type DNA-binding domain-containing protein ... 67 7e-10 UniRef50_C4V3H9 Response regulator n=2 Tax=Selenomonas RepID=C4V... 67 7e-10 UniRef50_B6XD52 Putative uncharacterized protein n=2 Tax=Provide... 67 8e-10 UniRef50_C0D1T3 Putative uncharacterized protein n=1 Tax=Clostri... 66 1e-09 UniRef50_C8Q2W3 Transcriptional regulator, AraC family n=1 Tax=P... 66 1e-09 UniRef50_A8S4U5 Putative uncharacterized protein n=1 Tax=Clostri... 65 2e-09 UniRef50_A1TWU6 Transcriptional regulator, AraC family n=2 Tax=M... 65 2e-09 UniRef50_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis ... 65 2e-09 UniRef50_P43460 HTH-type transcriptional activator csvR n=12 Tax... 65 3e-09 UniRef50_A6T768 Bacterial regulatory protein, AraC family n=48 T... 65 3e-09 UniRef50_Q4KDB9 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_C4GLE7 Putative uncharacterized protein n=1 Tax=Kingell... 64 4e-09 UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein ... 64 5e-09 UniRef50_A6GTF5 Transcriptional regulator, AraC family protein n... 64 5e-09 UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi... 64 5e-09 UniRef50_B5JTW9 Helix-turn-helix-domain containing protein, AraC... 64 7e-09 UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=D... 63 9e-09 UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1... 63 1e-08 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 63 1e-08 UniRef50_D2TIS0 Transcriptional regulator of virulence RegA n=5 ... 63 1e-08 UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vi... 63 1e-08 UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=C... 62 1e-08 UniRef50_A5F384 TCP pilus virulence regulatory protein n=21 Tax=... 62 2e-08 UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotro... 62 2e-08 UniRef50_Q21JI5 Transcriptional regulator, AraC family n=1 Tax=S... 62 2e-08 UniRef50_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibrio... 62 3e-08 UniRef50_C6LB63 Putative response regulator receiver domain prot... 62 3e-08 UniRef50_Q5ZTY8 Transcriptional regulator OruR, AraC family n=4 ... 62 3e-08 UniRef50_A4TFK9 Transcriptional regulator, AraC family n=11 Tax=... 61 3e-08 UniRef50_Q2SCQ2 AraC-type DNA-binding domain-containing protein ... 61 3e-08 UniRef50_B1Y1K0 Transcriptional regulator, AraC family n=2 Tax=B... 61 3e-08 UniRef50_C2ELJ2 AraC family transcriptional regulator n=1 Tax=La... 61 4e-08 UniRef50_B3C5Z2 Sensor protein n=2 Tax=Bacteroides RepID=B3C5Z2_... 61 4e-08 UniRef50_A6VXK4 Helix-turn-helix-domain containing protein AraC ... 60 5e-08 UniRef50_D2EZ28 Sensor protein n=1 Tax=Bacteroides sp. D20 RepID... 60 5e-08 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 60 6e-08 UniRef50_UPI00016A75A2 transcriptional regulator, AraC family pr... 60 6e-08 UniRef50_A7VPJ4 Putative uncharacterized protein n=1 Tax=Clostri... 60 7e-08 UniRef50_B4X4H5 Transcriptional regulator, AraC family protein n... 60 7e-08 UniRef50_A7VU71 Putative uncharacterized protein n=1 Tax=Clostri... 60 7e-08 UniRef50_P0A2T2 Virulence regulon transcriptional activator virF... 60 7e-08 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 60 7e-08 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 60 8e-08 UniRef50_D2QI98 Two component transcriptional regulator, AraC fa... 60 8e-08 UniRef50_Q21KL2 Transcriptional regulator, AraC family n=5 Tax=P... 60 9e-08 UniRef50_C6J5Q8 Two component transcriptional regulator n=1 Tax=... 60 9e-08 UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes Re... 60 9e-08 UniRef50_C0Z962 Probable two-component response regulator n=1 Ta... 60 1e-07 UniRef50_C4G4F0 Putative uncharacterized protein n=1 Tax=Abiotro... 60 1e-07 UniRef50_Q5LKF5 Transcriptional regulator, AraC family n=1 Tax=R... 60 1e-07 UniRef50_Q0VN05 Transcriptional regulator, AraC family n=2 Tax=A... 60 1e-07 UniRef50_A6KXQ8 Sensor protein n=2 Tax=Bacteroides RepID=A6KXQ8_... 59 1e-07 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 59 1e-07 UniRef50_A6GMI7 Putative transcriptional regulator, AraC family ... 59 1e-07 UniRef50_Q15UT2 Sensor protein n=1 Tax=Pseudoalteromonas atlanti... 59 1e-07 UniRef50_C5CTH9 Transcriptional regulator, AraC family n=1 Tax=V... 59 1e-07 UniRef50_Q7NTA1 Putative uncharacterized protein n=1 Tax=Chromob... 59 1e-07 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 59 2e-07 UniRef50_C2LMQ1 Virulence regulon transcriptional activator VirF... 59 2e-07 UniRef50_A6CZX1 Transcriptional regulator, AraC family protein n... 59 2e-07 UniRef50_A3K7B6 Putative uncharacterized protein n=2 Tax=Rhodoba... 59 2e-07 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 59 2e-07 UniRef50_D2LZT6 Two component transcriptional regulator, AraC fa... 59 2e-07 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 59 2e-07 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 59 2e-07 UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ... 59 2e-07 UniRef50_D1Y5U1 Putative two-component response regulator n=1 Ta... 59 2e-07 UniRef50_UPI0001968F18 hypothetical protein BACCELL_00802 n=1 Ta... 59 2e-07 UniRef50_B0P9Q1 Putative uncharacterized protein n=1 Tax=Anaerot... 59 2e-07 UniRef50_Q0VLF5 Transcriptional regulator, AraC family n=2 Tax=A... 59 2e-07 UniRef50_C1DBS2 AraC-type DNA-binding domain-containing protein ... 59 2e-07 UniRef50_A8EX63 Transcriptional regulator, AraC family n=1 Tax=A... 59 2e-07 UniRef50_D2YK24 Type 4 prepilin-like protein leader peptide-proc... 59 2e-07 UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=T... 59 2e-07 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 58 3e-07 UniRef50_Q7CUB1 Transcriptional regulator, AraC family n=1 Tax=A... 58 3e-07 UniRef50_B4SIX4 Transcriptional regulator, AraC family n=3 Tax=X... 58 3e-07 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 58 3e-07 UniRef50_A1U2D8 Transcriptional regulator, AraC family n=2 Tax=M... 58 3e-07 UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 T... 58 4e-07 UniRef50_C6D6L1 Transcriptional regulator, AraC family n=1 Tax=P... 58 4e-07 UniRef50_B0NUV9 Sensor protein n=3 Tax=Bacteroides RepID=B0NUV9_... 58 4e-07 UniRef50_C5C1L5 Transcriptional regulator, AraC family n=1 Tax=B... 58 4e-07 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 58 4e-07 UniRef50_Q2G532 Transcriptional regulator, AraC family n=1 Tax=N... 57 5e-07 UniRef50_Q5YRJ4 Putative transcriptional regulator n=2 Tax=Actin... 57 5e-07 UniRef50_C9RRZ9 Transcriptional regulator, AraC family n=1 Tax=F... 57 5e-07 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 57 5e-07 UniRef50_A1TVA8 Transcriptional regulator, AraC family n=17 Tax=... 57 5e-07 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 57 5e-07 UniRef50_B8FMW7 Transcriptional regulator, AraC family n=1 Tax=D... 57 5e-07 UniRef50_A7VQP5 Putative uncharacterized protein n=1 Tax=Clostri... 57 6e-07 UniRef50_A6Q8S4 Transcriptional regulator, AraC family n=1 Tax=S... 57 6e-07 UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi... 57 6e-07 UniRef50_Q7MJE3 AraC-type DNA-binding domain-containing protein ... 57 6e-07 UniRef50_B4X108 Transcriptional regulator, AraC family protein n... 57 6e-07 UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein ... 57 6e-07 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 57 6e-07 UniRef50_C0D596 Putative uncharacterized protein n=2 Tax=Clostri... 57 6e-07 UniRef50_B4WXJ1 Transcriptional regulator, AraC family protein n... 57 7e-07 UniRef50_A9U6D3 Predicted protein (Fragment) n=1 Tax=Physcomitre... 57 7e-07 UniRef50_C4T4E3 AraC-type DNA-binding domain-containing protein ... 57 8e-07 UniRef50_C6D226 Two component transcriptional regulator, AraC fa... 57 8e-07 UniRef50_D0SJB7 Predicted protein n=1 Tax=Acinetobacter junii SH... 57 8e-07 UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillu... 57 9e-07 UniRef50_C0ZD41 Probable transcriptional regulator n=1 Tax=Brevi... 57 9e-07 UniRef50_B6EKX1 HTH-type transcriptional regulator, AraC family ... 57 9e-07 UniRef50_A4XTI6 Transcriptional regulator, AraC family n=6 Tax=P... 57 9e-07 UniRef50_UPI0001788F96 two component transcriptional regulator, ... 57 9e-07 UniRef50_A9U8F0 Predicted protein (Fragment) n=1 Tax=Physcomitre... 57 9e-07 UniRef50_A5F2L6 Transcriptional regulator, AraC/XylS family n=33... 57 1e-06 UniRef50_C9NX62 Transcriptional regulator AraC family n=1 Tax=Vi... 57 1e-06 UniRef50_Q3JI70 AraC family regulatory protein n=28 Tax=pseudoma... 57 1e-06 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 56 1e-06 UniRef50_C1ABV7 AraC family transcriptional regulator n=1 Tax=Ge... 56 1e-06 UniRef50_A9MGM0 Putative uncharacterized protein n=1 Tax=Salmone... 56 1e-06 UniRef50_A9GN71 Tra n=1 Tax=Sorangium cellulosum 'So ce 56' RepI... 56 1e-06 UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=O... 56 1e-06 UniRef50_B7ASF8 Putative uncharacterized protein n=1 Tax=Bactero... 56 1e-06 UniRef50_Q48HQ8 Transcriptional regulator, AraC family n=3 Tax=P... 56 1e-06 UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Cl... 56 1e-06 UniRef50_UPI0001B4CF35 putative AraC family regulatory protein n... 56 1e-06 UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P... 56 1e-06 UniRef50_C7MT39 DNA-binding domain-containing protein, AraC-type... 56 1e-06 UniRef50_A4Y0S8 Transcriptional regulator, AraC family n=1 Tax=P... 56 1e-06 UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Brady... 56 1e-06 UniRef50_B2HZ04 AraC-type DNA-binding domain-containing protein ... 56 1e-06 UniRef50_B3CG99 Sensor protein n=4 Tax=Bacteroides RepID=B3CG99_... 56 1e-06 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 56 1e-06 UniRef50_B5JY44 Transcriptional regulator, AraC family, putative... 56 1e-06 UniRef50_B1MLH4 Probable transcriptional regulator, AraC family ... 56 1e-06 UniRef50_D1NAP2 Transcriptional regulator, AraC family n=1 Tax=V... 56 1e-06 UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X... 56 1e-06 UniRef50_C6D789 Two component transcriptional regulator, AraC fa... 56 1e-06 UniRef50_C0FZV1 Putative uncharacterized protein n=1 Tax=Rosebur... 56 2e-06 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 56 2e-06 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 56 2e-06 UniRef50_B9LZS6 Transcriptional regulator, AraC family n=1 Tax=G... 56 2e-06 UniRef50_A3WY00 Transcriptional regulator, AraC family protein n... 56 2e-06 UniRef50_A7K218 Transcriptional regulator AraC/XylS family n=5 T... 56 2e-06 UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Ba... 56 2e-06 UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostri... 56 2e-06 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 56 2e-06 UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=... 56 2e-06 UniRef50_C9Y4B2 Putative uncharacterized protein n=1 Tax=Cronoba... 55 2e-06 UniRef50_C6Y0D7 Sensor protein n=1 Tax=Pedobacter heparinus DSM ... 55 2e-06 UniRef50_A0KMW4 Transcriptional regulator, AraC/XylS family n=2 ... 55 2e-06 UniRef50_C9NYZ8 Transcriptional regulator AraC/XylS family n=8 T... 55 2e-06 UniRef50_Q481H7 Transcriptional regulator, AraC family n=1 Tax=C... 55 2e-06 UniRef50_Q1YPA3 Transcriptional regulator, AraC family protein n... 55 2e-06 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 55 2e-06 UniRef50_Q1YRD2 Putative transcriptional regulator (AraC family)... 55 2e-06 UniRef50_B8KKU1 Transcriptional regulator OruR n=1 Tax=gamma pro... 55 2e-06 UniRef50_C6J1B0 Transcriptional regulator n=2 Tax=Firmicutes Rep... 55 2e-06 UniRef50_A4Z0B3 Putative Transcriptional regulator, AraC/XylS fa... 55 2e-06 UniRef50_B6RAA0 Transcriptional regulator, AraC family n=4 Tax=A... 55 2e-06 UniRef50_A0P4C5 Transcriptional regulator, AraC family protein n... 55 2e-06 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 55 2e-06 UniRef50_C1DHF9 Transcription activator in PHB biosynthesis, Ara... 55 2e-06 UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostri... 55 2e-06 UniRef50_Q397S2 Transcriptional regulator, AraC family n=4 Tax=B... 55 2e-06 UniRef50_A0Z5W4 Transcriptional Regulator, AraC family protein n... 55 2e-06 UniRef50_D1B2G1 Helix-turn-helix, AraC domain protein n=1 Tax=Su... 55 2e-06 UniRef50_B5JUK1 AraC-type DNA-binding domain-containing protein ... 55 2e-06 UniRef50_UPI000178A7C6 two component transcriptional regulator, ... 55 2e-06 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 55 2e-06 UniRef50_B8KT68 Transcriptional regulator, AraC family n=1 Tax=g... 55 2e-06 UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-... 55 2e-06 UniRef50_B0NYF7 Putative uncharacterized protein n=1 Tax=Clostri... 55 2e-06 UniRef50_B2JT57 Transcriptional regulator, AraC family n=1 Tax=B... 55 2e-06 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 55 2e-06 UniRef50_C9Y8T8 Putative uncharacterized protein n=1 Tax=Curviba... 55 2e-06 UniRef50_A0M222 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 55 2e-06 UniRef50_UPI0001789612 two component transcriptional regulator, ... 55 3e-06 UniRef50_B3C929 Sensor protein n=8 Tax=Bacteroides RepID=B3C929_... 55 3e-06 UniRef50_C6JF00 Two component transcriptional regulator n=2 Tax=... 55 3e-06 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 55 3e-06 UniRef50_A4C5F8 Transcriptional regulator, AraC family protein n... 55 3e-06 UniRef50_C6J3K3 AraC family two component transcriptional regula... 55 3e-06 UniRef50_B6BG36 Transcriptional Regulator, AraC family, putative... 55 3e-06 UniRef50_C0ACQ1 AraC/XylS family transcriptional regulator n=1 T... 55 3e-06 UniRef50_C7PMQ7 Transcriptional regulator, AraC family n=1 Tax=C... 55 3e-06 UniRef50_C9L8Z4 Transcriptional regulator, AraC family n=2 Tax=C... 55 3e-06 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 55 3e-06 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 55 3e-06 UniRef50_B7S1T1 Transcriptional regulator, AraC family n=1 Tax=m... 55 3e-06 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 55 3e-06 UniRef50_UPI000178A004 two component transcriptional regulator, ... 55 3e-06 UniRef50_C1A7J5 AraC family transcriptional regulator n=1 Tax=Ge... 55 3e-06 UniRef50_C5ET72 Predicted protein n=1 Tax=Clostridiales bacteriu... 55 3e-06 UniRef50_C9NYS3 Transcriptional regulator AraC family n=9 Tax=Vi... 55 4e-06 UniRef50_B1C0X8 Putative uncharacterized protein n=1 Tax=Clostri... 55 4e-06 UniRef50_A6VTM5 Helix-turn-helix-domain containing protein AraC ... 54 4e-06 UniRef50_A6F6Z7 Probable transcriptional regulator n=1 Tax=Morit... 54 4e-06 UniRef50_A6NST3 Putative uncharacterized protein n=1 Tax=Bactero... 54 4e-06 UniRef50_C6IYS4 Response regulator n=1 Tax=Paenibacillus sp. ora... 54 4e-06 UniRef50_Q1JFS4 Two-component response regulator yesN n=16 Tax=S... 54 4e-06 UniRef50_C4G3Y7 Putative uncharacterized protein n=1 Tax=Abiotro... 54 5e-06 UniRef50_Q9KFT3 Methylphosphotriester-DNA alkyltransferase (AraC... 54 5e-06 UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-bindin... 54 5e-06 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 54 5e-06 UniRef50_C6CVE0 Two component transcriptional regulator, AraC fa... 54 5e-06 UniRef50_B4RXH5 Putative transcriptional regulator n=2 Tax=Alter... 54 5e-06 UniRef50_C5BHZ4 Helix-turn-helix-domain containing protein, AraC... 54 5e-06 UniRef50_C7G923 Transcriptional regulator, AraC family n=1 Tax=R... 54 5e-06 UniRef50_Q3KCK3 Putative transcriptional Regulator, AraC family ... 54 5e-06 UniRef50_A9G936 Transcriptional regulator, AraC family n=1 Tax=S... 54 5e-06 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 54 5e-06 >UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax=Bacteria RepID=GADX_ECO27 Length = 274 Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust. Identities = 256/274 (93%), Positives = 260/274 (94%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS Sbjct: 1 MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 LLSVFLED FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274 ERSAQ L N AAS+ AQGNFYGTDRSAEGIRL Sbjct: 241 ERSAQELPNCGPAASMAAQGNFYGTDRSAEGIRL 274 >UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment) n=1 Tax=Citrobacter sp. MY-5 RepID=Q5G2X8_9ENTR Length = 170 Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 167/170 (98%), Positives = 167/170 (98%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQSLHGNCLIAYAR YILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS Sbjct: 1 MQSLHGNCLIAYARRGYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVPVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 >UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glutamic acid decarboylase and transporter (GadA, gad BC) (AraC/XylS family) (Modular protein) n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH5_ESCF3 Length = 289 Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 163/227 (71%), Gaps = 3/227 (1%) Query: 18 ILTMVNGEYRYFNGGDLVFADASQIRVDKC--VENFVFVSRDTLSLFLPMLKEEALNLHA 75 ILT +G G+L+F D Q+ + +EN +++ T+SL + L ++L +H+ Sbjct: 33 ILTFNDGNKITIAPGNLIFVDPRQLTITHYGELENVALITQKTISLLVSALNSDSL-IHS 91 Query: 76 HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLL 135 +K +S + DI +F+ A LS +L AE LRKR+L+ AL+S+FL+D++FIPLL Sbjct: 92 YKAHNSPFIIRKCPDIAIFKYAANLSHKSDLSCAEKLRKRSLMLALMSLFLDDQNFIPLL 151 Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRM 195 + +L P++ TRVC VIN+NIA++W+L IASELLMSPSLLKKKL+ E+T+YSQLLTECRM Sbjct: 152 MRILHPDITTRVCAVINSNIANDWSLTLIASELLMSPSLLKKKLQAEQTTYSQLLTECRM 211 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 Q+AL+L+ +++K+ A+ CGY SVSYFI VFR ++G+TPTEYQ++ Sbjct: 212 QQALKLLRCDDYAVKKTAILCGYKSVSYFIAVFRKHFGITPTEYQDK 258 >UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Tax=Enterobacteriaceae RepID=ADIY_ECOLI Length = 253 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%) Query: 30 NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78 NG + + A+ + + C N + +S D + +L L ++ + ++ Sbjct: 23 NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 82 Query: 79 VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138 ++ ++ VF+ AQ S +E R RAL+F +LS FL+ + F+ L++ + Sbjct: 83 SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSLMMYM 142 Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 L+ + V +I ++I +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + +++ G +I +V+ SCGY+S SYFI VF+++YGMTP Y + +R Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250 >UniRef50_P10805 Porin thermoregulatory protein envY n=41 Tax=Enterobacteriaceae RepID=ENVY_ECOLI Length = 253 Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/194 (39%), Positives = 123/194 (63%) Query: 54 VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113 ++R+ ++ +L L + + ++++ ++ SR VF+ A S+ + R E Sbjct: 58 INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSRPCEAEL 117 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 RAL+F +LS FLE FI LL+ +L+ ++R VC +I ++I H W L +AS L +SPS Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177 Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 LLKKKL+ E TSYSQ++TECRM+ A+Q++++ +I +VA CGY S SYFI VF+ +YG Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237 Query: 234 MTPTEYQERSAQRL 247 +TP Y + Q++ Sbjct: 238 LTPLNYLAKQRQKV 251 >UniRef50_Q04819 ORF11 n=5 Tax=Salmonella enterica subsp. enterica RepID=Q04819_SALTY Length = 259 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 1/174 (0%) Query: 52 VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 V ++R+TL F L + L + K + LV C D + +L + Y E Sbjct: 51 VVITRETLCRFARQLDVDVLKFYIPKDIPRYLVQPCPEDSVFRPLMVRLCAGTDNSYGET 110 Query: 112 LRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 + L FAL+S F E + F P L L+ +M +V TVIN N++ WT+ R+A EL + Sbjct: 111 GPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWTIHRVAGELYV 170 Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 S SLLKKKL+EE TSY+++L ECRM++A +LIV+ ++K+VA CGY SV F Sbjct: 171 SVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPVF 224 >UniRef50_B7M6J8 Putative AraC-type regulatory protein encoded in prophage CP-933H ( transcription regulator) n=16 Tax=Escherichia RepID=B7M6J8_ECO8A Length = 250 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 20/161 (12%) Query: 85 HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR 144 +HC+ I +F E ++ F LS F ++ F L L+ + Sbjct: 101 NHCAEYIEIFDE-------------------SIAFTCLSAFSSEKQFGVFLFECLK-STE 140 Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204 +V T+I+ +++ W L I+S L +S SLLK+KL+EE S+S+++ + RMQ A L+ Sbjct: 141 AKVKTIIHTDLSAPWRLKDISSRLYLSESLLKRKLKEEGVSFSKIILDERMQMAEYLLST 200 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + I +VA CGY SVSYF YVFR Y+G++P++Y +RS++ Sbjct: 201 RCYPISKVAKVCGYASVSYFTYVFRRYFGVSPSQYSQRSSE 241 >UniRef50_Q83RF4 HTH-type transcriptional regulator ydeO n=59 Tax=Enterobacteriaceae RepID=YDEO_SHIFL Length = 253 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 89/144 (61%), Gaps = 5/144 (3%) Query: 117 LIFALLSVFLEDEHFIPLLLN-VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 L+F+ LS+F + FI LL N VL + + R ++N +AH W L I L +S SLL Sbjct: 110 LLFSCLSIFAACKGFITLLTNGVLSVSGKVR--NIVNMKLAHPWKLKDICDCLYISESLL 167 Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 KKKL++E+T++SQ+L + RMQ A LI + G S+ ++A CGY S SYFIY FR ++G + Sbjct: 168 KKKLKQEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNS 226 Query: 236 PTEY-QERSAQRLSNRDSAASIVA 258 P +E QR + ++ ++ A Sbjct: 227 PKRVSKEYRCQRHTGMNTGNTMSA 250 >UniRef50_B7LQH4 GadW HTH-type(AraC-type) transcriptional positive regulator of gadA and gadBC, in absence of gadX; repressor of gadX n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH4_ESCF3 Length = 245 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 1/128 (0%) Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L F+ LS+F + +PLL N + + +V +I+ + + W L +A +L S SL+K Sbjct: 112 LYFSCLSLFSMHDELVPLLFNSIN-TLSGKVERIISVDTSRRWYLRDVAEKLYTSESLIK 170 Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 KKL++E TS+S++L RM RA L+ ++ + +A CGY S SYFI FR YYG+TP Sbjct: 171 KKLQDENTSFSKILLASRMARAKTLLELNQMPLTVIAEKCGYSSTSYFINTFRQYYGVTP 230 Query: 237 TEYQERSA 244 +Y RSA Sbjct: 231 HQYSHRSA 238 >UniRef50_P05052 HTH-type transcriptional regulator appY n=6 Tax=Escherichia coli RepID=APPY_ECOLI Length = 249 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 26/215 (12%) Query: 49 ENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY 108 +N +F+ D + LP+ + + KK + ++P + + +KN Sbjct: 27 KNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELP-----GKFTLDKNGYI 81 Query: 109 AEMLRKRALIFALL---------SVFLEDEHFIPLLL---------NVLQPNMRTRVCTV 150 AE +L+F+L S++L++ I LL + + N+ T C + Sbjct: 82 AEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKI 141 Query: 151 ---INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGF 207 I+ NI +W L IA + S SL+KK+LR+E TS++++L + RM+ A +LI + + Sbjct: 142 TGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSY 201 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 SI VA CGY+S SYFI F++YYG+TP+ Y E+ Sbjct: 202 SINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEK 236 >UniRef50_B5FRI8 AraC family regulatory protein n=32 Tax=Enterobacteriaceae RepID=B5FRI8_SALDC Length = 291 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 21/245 (8%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63 LI K +T +GEY +G L+F Q I +++ E N+ + D+ S+ Sbjct: 41 LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98 Query: 64 PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114 + A N L+ H S L ++ + P+ VA++ S NK+ + ++ +K Sbjct: 99 ----KNAYNFFLYEHADFSDPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 LI LLS F+ + L + Q + + +I ++I+ +W L I+ L MS S Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213 Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 LK+KL++E TS+S++ RM +A +L+ ++I RVA CGY S SYF VF+ ++ Sbjct: 214 LKRKLKQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273 Query: 235 TPTEY 239 TP+E+ Sbjct: 274 TPSEF 278 >UniRef50_Q93SE2 Putative uncharacterized protein n=1 Tax=Escherichia coli RepID=Q93SE2_ECOLX Length = 245 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 36/233 (15%) Query: 20 TMVNGEYRYFNGGDLVFAD-------------ASQIRVDKCVENFVFVSRDTLSLFLPML 66 T + G+ +F D++ D +++R+D+C+ S D + Sbjct: 15 TEIAGKKLFFQKNDVLLTDNISQSFFLRHPGNVTELRIDECIVRKYMESADRIQ------ 68 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-LSQNKNL--RYAEMLRKRALIFALLS 123 H+ VS + I + V Q LS K L +++E + FA LS Sbjct: 69 -------HSDSAVSVPFIKTTFSHIALLHNVMQNLSLQKTLPQQFSE-----QMFFACLS 116 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 +F F+ LL + ++ +V +I ++ + W + I++ L MS SLLK+KL+EE+ Sbjct: 117 IFSTHRGFMFLLFRCIN-SVALKVRYIICSSPSRAWRVKDISNSLYMSESLLKRKLQEEK 175 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 S+SQ+L + RM A QLI S+ ++A+ CGY S YFI VFR Y+G+TP Sbjct: 176 VSFSQILLDIRMHNARQLIS-SKLSVNQIAIRCGYASTPYFISVFREYFGITP 227 >UniRef50_P63202 HTH-type transcriptional regulator gadW n=57 Tax=Enterobacteriaceae RepID=GADW_ECO57 Length = 242 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 14/209 (6%) Query: 49 ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99 ++F F S DT L +L +++ NL H K LL++ S +P+ + Sbjct: 39 DDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96 Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 S N++ + +L L + LS+F + IPLL N + + +V +I+ +IA W Sbjct: 97 -SFNESGVNSPIL-SNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153 Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 L IA + S SL+KKKL++E T +S++L RM A +L+ + + +A CGY Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213 Query: 220 SVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 S SYFI FR YYG+TP ++ + S S Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHSPGTFS 242 >UniRef50_C6UHW7 Putative AraC-type regulatory protein encoded in prophage n=2 Tax=Escherichia coli RepID=C6UHW7_ECOBR Length = 237 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 67/101 (66%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 ++ +V +I+++I+ W L I+S L MS SLLK+KL++E S+S+L+ E RM A +L Sbjct: 135 SLGCKVKAIIHSDISASWRLCDISSRLYMSESLLKRKLKDEGLSFSKLILEERMMMAQRL 194 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 ++ ++ +VA CGY + SYF+ VFR Y+G+ P +Y R Sbjct: 195 LIYSNHTVGKVAGICGYDNASYFVSVFRGYFGVPPHQYLSR 235 >UniRef50_C6UPG2 Putative envelope protein encoded within prophage CP-933N n=34 Tax=Escherichia coli RepID=C6UPG2_ECO5T Length = 237 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 7/154 (4%) Query: 92 PVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVI 151 P E SQ R++ L+ A LS+F DE + L L ++ +V +I Sbjct: 87 PALAEALITSQ----RFSGDTTDMFLMMACLSLFESDERILLFLSGCLS-SISAKVRAII 141 Query: 152 NNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI-HGFSIK 210 +I+ WTL IA L MS SLLK KL+ E +S+LL E RM+ A+ ++ HG+ + Sbjct: 142 QTDISASWTLGAIALRLHMSESLLKIKLKNEGHMFSRLLLEERMRVAVNMLCSRHGYG-Q 200 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 VA CGY S SYFI VF YYG P Y R Sbjct: 201 AVAEKCGYSSWSYFISVFHRYYGFPPDRYVSRQG 234 >UniRef50_P41782 Transcriptional regulator hilD n=38 Tax=Salmonella enterica RepID=HILD_SALTY Length = 309 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 65/106 (61%) Query: 134 LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTEC 193 ++L+ Q ++ RV +I+++ + +W L +A + MS S LK+KL EE TS+S + Sbjct: 198 IILSSAQITLKERVYNIISSSPSRQWKLTDVADHIFMSTSTLKRKLAEEGTSFSDIYLSA 257 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 RM +A +L+ I ++ VA+ CGY S SYFI F+ Y+ TP+ + Sbjct: 258 RMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTF 303 >UniRef50_A7ZH67 HTH-type transcriptional regulator YdeO n=2 Tax=Escherichia coli RepID=A7ZH67_ECO24 Length = 240 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 2/126 (1%) Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 K A+ F+LLSVF D + L P +V ++ ++++ W L +A L MS S Sbjct: 114 KDAIFFSLLSVF-SDVANLRAFLTSGMPTFSGKVRSIFLSDVSKHWKLRDLADYLYMSES 172 Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L+KKKL E TS+S++L + RM A++L+ IK V+ CG+ S SYF+ +FR YY Sbjct: 173 LIKKKLLLENTSFSKILLDTRMSLAIKLLK-QNHPIKYVSEMCGFSSTSYFVCLFRQYYE 231 Query: 234 MTPTEY 239 TP +Y Sbjct: 232 CTPRKY 237 >UniRef50_Q8Z4A6 Transcriptional regulator sirC n=36 Tax=Salmonella enterica RepID=SIRC_SALTI Length = 295 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 71/119 (59%) Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 L+S F+ L ++ + +V +I +++ +W+ A +A +L MS S LK+KL Sbjct: 171 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLA 230 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 EE S+S++ + RM +A++L+ + +I +VA CGY + SYFI +F+ ++ +TP + Sbjct: 231 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 289 >UniRef50_A7XY51 LngS n=3 Tax=Enterobacteriaceae RepID=A7XY51_ECOLX Length = 298 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 3/145 (2%) Query: 100 LSQNKNLRYAEMLRKRALIFALL---SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIA 156 LSQ K + ++ +ALL S F+ D F ++ + +++ +V ++ Sbjct: 150 LSQEKKGIFENEEKENIATYALLLLLSGFIHDTAFAGIISRSAKLSVKYKVYNLLYTEPD 209 Query: 157 HEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 +W L ++S + MS S LK+KL E T++S+L RM A +L+ +S+ VAV C Sbjct: 210 KQWKLDDVSSAIFMSASTLKRKLATEGTTFSELYITARMNLASKLLRTGKYSVTNVAVLC 269 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQE 241 GY SVSYFI F+ + +TP+ + + Sbjct: 270 GYDSVSYFIACFKRQFNITPSAFMK 294 >UniRef50_Q8GA53 Putative CS12 fimbrial-like upstream regulatory protein n=3 Tax=Escherichia coli RepID=Q8GA53_ECOLX Length = 290 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 64/107 (59%) Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191 +PL+ RV +I +NIA +WTL ++ E +S ++KKL E + +L+ Sbjct: 177 LPLIYFSAATTFCNRVIELIESNIAKKWTLRLLSEEFSISEIAIRKKLEAEGVIFRELIL 236 Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 E RM++A+ L++ S+ ++A GY+++SYFI FR ++GMTP + Sbjct: 237 EIRMKKAMTLLIAGELSVSKIADKVGYNNISYFISHFRQFFGMTPKQ 283 >UniRef50_P43459 Transcriptional activator perA n=24 Tax=Escherichia coli RepID=PERA_ECO27 Length = 274 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 75/136 (55%) Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164 +++Y+ +K I LLS F + + ++L+ ++ RV VI +I+ W L + Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187 Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 +S + MS S L+K+L +E ++ +++ + +M+ A + +I ++ G++S SYF Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247 Query: 225 IYVFRNYYGMTPTEYQ 240 I VF+ YY TP +Y Sbjct: 248 IKVFKEYYNTTPKKYN 263 >UniRef50_B5R1L9 Fimbrial operon positive regulatory protein n=11 Tax=Salmonella enterica subsp. enterica RepID=B5R1L9_SALEP Length = 271 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 65/104 (62%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209 I+N+I+ +W L ++ +L +S ++KKL E T++ ++L + RMQ+A +L++ I Sbjct: 163 TIDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHI 222 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 +V+ + G SVSYFI +F +YYG+TP ++ + R + +A Sbjct: 223 NKVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAA 266 >UniRef50_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QI0_MANSM Length = 284 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 7/134 (5%) Query: 118 IFALLSVFLEDEH--FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 +F LL+ +L+ EH F+P + N+ ++ +I +N A EWT IA +L +S + L Sbjct: 144 LFELLA-WLKAEHLSFVPHEKH----NLLRQIRKMIASNTAFEWTAETIARQLHLSETSL 198 Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 ++ L++ +T++ ++LT+ RM RAL L+ I + + R+A GY S S F F+ +G Sbjct: 199 RRALQKSDTTFREVLTDVRMSRALTLLQITKWQVARIANEVGYDSPSRFTVRFKQRFGFL 258 Query: 236 PTEYQERSAQRLSN 249 P++ +E +Q + N Sbjct: 259 PSDIRENLSQPVQN 272 >UniRef50_Q8GA34 AraC-like transcriptional regulator n=2 Tax=Escherichia coli RepID=Q8GA34_ECOLX Length = 271 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 57/88 (64%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210 I NN + W L IA E +S ++K+L E TS+S L + RM++++QL++ + I Sbjct: 177 IENNPSKRWCLNMIADEFNISEISVRKRLESEGTSFSNLFLKVRMEKSMQLLLQNELQIC 236 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +++ S G+ S SYFI +F++Y+G+TP + Sbjct: 237 QISKSVGFRSTSYFIKIFKDYFGITPKQ 264 >UniRef50_P68913 Uncharacterized HTH-type transcriptional regulator Rv1395/MT1440 n=15 Tax=Mycobacterium RepID=Y1395_MYCTU Length = 344 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 29/253 (11%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59 L+ A + LT ++ + F D LV DAS + D V F F+ RD T Sbjct: 103 LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD--VRGF-FIERDIAGIIATTT 159 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 S LP+ + A + A V + L+ +PV +VA + + + + L Sbjct: 160 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 218 Query: 120 ALLSVFLEDEHFIPLLLN----VLQPNMRTR-VCTVINNNIAHE----WTLARIASELLM 170 A D H + + + ++Q N R R + ++ + + + T +A EL M Sbjct: 219 A-------DRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDM 271 Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 P L+++L EE TS+ LL E R A+ L+ G ++++V+ GY VS F + F+ Sbjct: 272 HPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKR 331 Query: 231 YYGMTPTEYQERS 243 +YG+ P+EY R Sbjct: 332 WYGVAPSEYSRRG 344 >UniRef50_P32326 Urease operon transcriptional activator n=12 Tax=Gammaproteobacteria RepID=URER_ECOLX Length = 296 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 2/136 (1%) Query: 111 MLRKRALIFALLSVFLEDEHFIPLL-LNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 +L K++L F L++++ E + L N +P + + +I +W L +A L Sbjct: 137 LLMKQSLYFILMAIYQEGIDILNLFRFNYDEPKNQA-ITHLITQEPQKKWHLDDVAKALF 195 Query: 170 MSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 +PS L++ L E S+ QLL + RM AL + +S+ +++ CG+ S +YF VF+ Sbjct: 196 TTPSTLRRHLNREGVSFRQLLLDVRMGMALNYLTFSNYSVFQISHRCGFGSNAYFCDVFK 255 Query: 230 NYYGMTPTEYQERSAQ 245 Y MTP++++ +S Q Sbjct: 256 RKYNMTPSQFRLQSRQ 271 >UniRef50_P23774 987P fimbrial operon positive regulatory protein fapR n=1 Tax=Escherichia coli RepID=FAPR_ECOLX Length = 260 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 61/95 (64%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 R+ T++ +++ +W L+ IA E+ +S ++K+L +E +++QL+ + RM +A + I+ Sbjct: 155 RIVTLLFSDLTRKWKLSDIAEEMHISEISVRKRLEQECLNFNQLILDVRMNQAAKFIIRS 214 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 I +A GY SVSYFI F+ YYG+TP +++ Sbjct: 215 DHQIGMIASLVGYTSVSYFIKTFKEYYGVTPKKFE 249 >UniRef50_A6AXU3 Transcriptional regulator, AraC family protein n=3 Tax=Vibrio parahaemolyticus RepID=A6AXU3_VIBPA Length = 238 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 60/105 (57%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 ++ +R+ +I+ ++ WTL IA + MS S +K+KL +E T+++ +L R+ A ++ Sbjct: 132 SLSSRIRALISKDLTKPWTLKEIAKLVYMSESTVKRKLNKEGTTFTDVLQAARLDTAQKM 191 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + S+ +A CG+ SYF FR YG TP Y++++ R Sbjct: 192 VCNSDASVSAIAELCGFKHASYFGACFRKEYGATPLAYRKQAQLR 236 >UniRef50_B5ZYE2 Transcriptional regulator, AraC family n=12 Tax=Rhizobium RepID=B5ZYE2_RHILW Length = 284 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 56/96 (58%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 P + R+ +I ++ A +WTLA A MS + L+++L E T +S++L++ RM RAL Sbjct: 162 PRLEDRLRQMIESDPAFDWTLAHAARSFNMSEATLRRRLAAENTGFSEILSDTRMNRALG 221 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 LI + +VA+ GY S S F F+ +G++P Sbjct: 222 LIHTTTLPMAQVALEVGYDSPSQFSARFKERFGVSP 257 >UniRef50_A7ZGX7 Transcriptional regulator, AraC family n=1 Tax=Escherichia coli E24377A RepID=A7ZGX7_ECO24 Length = 209 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 60/94 (63%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 +V VI +++ +WTLA IA +S ++K+L E+T+++Q+L + RM +A L++ + Sbjct: 109 KVRGVIEKDLSRKWTLAIIADVFNVSEITIRKRLESEDTNFNQILMQSRMSKAALLLLEN 168 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + I +++ G S SYFI +F ++G+TP ++ Sbjct: 169 SYQISQISNMIGISSASYFIRIFNKHFGVTPKQF 202 >UniRef50_A2PNS5 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio cholerae MZO-3 RepID=A2PNS5_VIBCH Length = 267 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%) Query: 159 WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH-GFSIKRVAVSCG 217 W+L+ +A EL MS S LK+KL+ E+ ++++L RM A +L++ + I VA CG Sbjct: 181 WSLSMMAKELYMSESTLKRKLKSEDQTFTELYNFARMSHAKKLLLSNRDIKIATVAEMCG 240 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQE 241 ++ VSYF+ F+ Y+G++P Y++ Sbjct: 241 FNHVSYFVSCFKKYFGLSPLVYKK 264 >UniRef50_Q5DYJ4 Transcriptional regulator, AraC family n=1 Tax=Vibrio fischeri ES114 RepID=Q5DYJ4_VIBF1 Length = 269 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 53/87 (60%) Query: 157 HEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 H WTL ++ EL +PS L++ L++E S+S+LL + R+ L + SI +V+ Sbjct: 175 HSWTLITVSKELNTTPSTLRRHLKKENISFSKLLLKIRLGLGLNYLTFSNHSILKVSYLS 234 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQERS 243 G++S +YF VF+ Y MTP+E++ S Sbjct: 235 GFNSSAYFCDVFKKEYHMTPSEFRINS 261 >UniRef50_B3C9G8 Sensor protein n=2 Tax=Bacteroides RepID=B3C9G8_9BACE Length = 1288 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 6/135 (4%) Query: 106 LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARI 164 +R E++R++AL + E++ +L N L + VI+NN+ + ++ Sbjct: 1157 MRNREIVREKALKL----IKPENDEQQVILANELNDQFVKKAVEVIHNNMQNLDFDKESF 1212 Query: 165 ASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 A E+ +S SLL KK++ S + + R+ RAL+L+ H ++I V+ CGY S+SY Sbjct: 1213 AMEMHVSGSLLYKKIKALTGQSPIEFIKSIRLNRALELLQSHKYTITEVSELCGYSSISY 1272 Query: 224 FIYVFRNYYGMTPTE 238 F VF+ Y+G +PTE Sbjct: 1273 FSTVFKKYFGKSPTE 1287 >UniRef50_D0YX71 Transcriptional regulator AraC family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX71_LISDA Length = 321 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%) Query: 84 VHHCSRDIPVFQEVAQLSQNK-----NLRYAEMLRKRALIFALLSVFLEDEHFIPLL--- 135 V+H + V ++ QL Q + R + ++L F LL++ +E I + Sbjct: 134 VYHLNETPDVVEQNFQLFQQSLPAVADTRLEKTFLTQSLFFILLAL---NEAGIDVFNVY 190 Query: 136 -LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECR 194 N +P RT + +I + +W++ +A L + S L++ L +E S+SQLL + R Sbjct: 191 RFNYDEPKERT-IARLITQDPQRKWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVR 249 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 M AL + +SI ++ G+ S +YF F+ YG+TP+++ R+ R N SA Sbjct: 250 MGLALNYLTFSNYSISQIGHRSGFGSAAYFCDAFKRKYGITPSQF--RATSREHNDMSA 306 >UniRef50_D1RT58 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RT58_SEROD Length = 294 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 7/127 (5%) Query: 113 RKRALIFALLSVFLEDE-HF-IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 R R IF LL V E HF +P VL R+ ++ + +WT L M Sbjct: 170 RIRLRIFDLLLVLAEQNIHFALPRRQGVL-----PRLSHLLRASPETDWTARSAGEALAM 224 Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 S S L+++LREE S+ +LL + RM L LI +++ +VA +CGY SVS F F Sbjct: 225 SESTLRRRLREEGGSFEKLLVDIRMHHGLMLIQTTRWNMAQVADACGYKSVSRFAERFTQ 284 Query: 231 YYGMTPT 237 +G+ P+ Sbjct: 285 RFGLPPS 291 >UniRef50_A0Z3Z2 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3Z2_9GAMM Length = 343 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 4/89 (4%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 IA L MSP L+++L+ E TSY +++ + RMQ A QL+ S V ++CG+ S Sbjct: 254 IAQALHMSPRTLQRRLKAENTSYGEVVQQTRMQLAQQLLASPDISATEVGLACGFSDASA 313 Query: 224 FIYVFRNYYGMTPTEYQERSAQRLSNRDS 252 F F+ + G TP++Y RS + N DS Sbjct: 314 FTRAFKRWTGTTPSDY--RSG--MPNTDS 338 >UniRef50_A3J4H6 Two-component system sensor histidine kinase/response regulator, hybrid ('one component system') n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4H6_9FLAO Length = 254 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 1/101 (0%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVI 204 ++ ++ NI + T+ ++ASE+ +S S + KK+R+ ++ + S + E R+ A++LI Sbjct: 152 KIDDIVIRNIKTDVTIEKLASEIFVSKSTIDKKIRKFKQVNVSTYIREIRLNYAIKLIES 211 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 ++ +A+ CG++S SYF F+NY G++P +Y + Q Sbjct: 212 GEVNVDTLAIECGFNSTSYFSVCFKNYSGLSPKKYINQKIQ 252 >UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n=6 Tax=Vibrionaceae RepID=Q2BYZ8_9GAMM Length = 293 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRM 195 N +P RT + +I + +W++ +A L + S L++ L +E S+SQLL + RM Sbjct: 162 FNYDEPKERT-IARLITQDPQRKWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVRM 220 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 AL + +SI +++ G+ S +YF F+ YG+TP++++ S Q Sbjct: 221 GLALNYLTFSNYSISQISNRSGFGSAAYFCDAFKRKYGITPSQFRTTSRQE 271 >UniRef50_D0KCL6 Transcriptional regulator, AraC family n=5 Tax=Pectobacterium RepID=D0KCL6_PECWW Length = 288 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 56/99 (56%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199 QP + T++ +I+ WT L MS + L+++L E+T + LL E RMQ A+ Sbjct: 188 QPGVSTQLRALISEEPERHWTAQSAGRLLAMSEATLRRRLSAEQTRFEVLLLETRMQHAM 247 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L+ +S++R+A +CGY S + F F+ +G +PT+ Sbjct: 248 MLVQTTSWSMQRLAEACGYKSSARFSERFKTRFGCSPTK 286 >UniRef50_UPI0000F30067 putative transcriptional regulator AraC/XylS family protein n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F30067 Length = 194 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 55/100 (55%) Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 + ++ RV T+I+ +++ E T IA++L MS S L++KL+ E S + R+ Sbjct: 87 MNKSLSERVQTLISYHLSTELTAEFIAAQLFMSSSTLRRKLKSEGNSIQDIRNRVRLGHG 146 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L LI SI +A CGY S S F F+N +G+TP E Sbjct: 147 LHLIQTTNNSIGNIAFECGYQSQSRFTEQFKNLFGITPRE 186 >UniRef50_A6WTM9 Helix-turn-helix-domain containing protein AraC type n=7 Tax=Shewanella RepID=A6WTM9_SHEB8 Length = 252 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%) Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 A L + L D+ + L Q ++ +++ + A W IA +L MS + L++K Sbjct: 128 LAALLLSLPDKRSVSWLYGHTQRSVTQAALALMSVSPAAPWQQEEIADKLHMSTASLRRK 187 Query: 179 LREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L E+TS+ QLL E R+ L ++ G + +VA++CGY S F F+ +G+TP Sbjct: 188 LALEDTSFRQLLVEVRLSHGLAMLQNSGEPLLQVALACGYQSAEKFSLRFKQQFGLTPAA 247 Query: 239 Y 239 Y Sbjct: 248 Y 248 >UniRef50_A6B243 Transcriptional activator of virulence loci n=4 Tax=Vibrio parahaemolyticus RepID=A6B243_VIBPA Length = 247 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 6/107 (5%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 R+ +I+ I H WT I+ L MS + L +++ +E+T+ S L+ RM +A L++ Sbjct: 137 RIHRLISKQIQHRWTAEEISKNLNMSKATLMRRISQEKTTLSDLILSARMNKAAYLLLKK 196 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT------EYQERSAQR 246 IK+VA G+ S SYF F+ YG +P +Y+++ QR Sbjct: 197 KHPIKKVAHLTGFSSASYFCKKFKETYGNSPKQFVNLMDYKQKETQR 243 >UniRef50_B2I0Q2 AraC-type DNA-binding domain-containing protein n=4 Tax=Acinetobacter RepID=B2I0Q2_ACIBC Length = 270 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 55/100 (55%) Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 + ++ RV T+I+ +++ E T IA++L MS S L++KL+ E S + R+ Sbjct: 163 MNKSLSERVQTLISYHLSTELTAEFIAAQLFMSSSTLRRKLKSEGNSIQDIRNRVRLGHG 222 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L LI SI +A CGY S S F F+N +G+TP E Sbjct: 223 LHLIQTTNNSIGNIAFECGYQSQSRFTEQFKNLFGITPRE 262 >UniRef50_C4V3H9 Response regulator n=2 Tax=Selenomonas RepID=C4V3H9_9FIRM Length = 255 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 50/90 (55%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210 + +IA T+ +A EL +S S L K TS+S LTECR++RA L+ + Sbjct: 161 MEEHIAEPITVREVADELGLSVSYLHKLFSRCGTSFSSYLTECRLRRAGHLLRESDAKVY 220 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 VA +CGY YF +F+ + GM PTEY+ Sbjct: 221 AVAAACGYQDTRYFSKIFQKHMGMKPTEYR 250 >UniRef50_B6XD52 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6XD52_9ENTR Length = 282 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 28/236 (11%) Query: 19 LTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKK 78 L + NGE+ + ++ F K +E + ++L + + E LN + +K+ Sbjct: 42 LRIENGEWCNLSTNNICFLPKG-----KVIEFIKKAVSEKIALDIMPVSAEMLN-YFYKQ 95 Query: 79 VSSLLVHH---------CSRDI---PVF--------QEVAQLSQNKNLRYAEMLRKRAL- 117 S+L + C+ DI P+ QE+ L N + + + K A+ Sbjct: 96 NSALFIEKKKTHYHSQVCTTDISNTPILGEVFYSAIQEIRHLEMNTDTKIKNVDNKMAIH 155 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLK 176 + +LS FL + F P L + + +V I +N + TL IA +L MS S LK Sbjct: 156 LNFVLSFFLLENTFYPTLQTSMNVLTKDKVYDYIYHNSGKQNCTLELIAKQLHMSTSTLK 215 Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 ++L E+T++S + RM +A+ L + + R+A GY + +FI F+N+Y Sbjct: 216 RRLASEDTNFSTISLTSRMNKAMMLSKVDNMPMPRIAQEVGYDDIPHFIQAFKNFY 271 >UniRef50_C0D1T3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T3_9CLOT Length = 361 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 10/109 (9%) Query: 144 RTRVCTVI---------NNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTEC 193 R R C+ + N E+TL +A L++SP+ L + +EE T + + L E Sbjct: 251 RNRSCSALIKSALEEIDRNYFRSEFTLQTLAETLMVSPNYLSARFKEETGTGFVRFLNEK 310 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 RM+RA L+ I VA CG V YF +F+ Y GMTP EY+++ Sbjct: 311 RMERAKGLLADVSRKIYEVACQCGIEDVRYFTRLFKEYAGMTPKEYRDK 359 >UniRef50_C8Q2W3 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2W3_9ENTR Length = 285 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 16/192 (8%) Query: 51 FVFVSRDTLSLFLPMLKEEALNLHAHKKVSS--LLVHHCS--RDIPVFQEVAQLSQNKNL 106 F+ ++ D L F + + + ++++ LL H R++ E Q+S + Sbjct: 104 FISLNADVLDAFYQQFPQYLVGTRKNAQITTVELLSHQQESIRNLLAMLENPQISDD--- 160 Query: 107 RYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 R R IF LL V E I LL Q + R+ ++ WT Sbjct: 161 ------RVRLRIFDLLLVLAEQN--IRFLLPQ-QQGIFPRLSKLLREAPDKGWTAKVAGD 211 Query: 167 ELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 L MS S L+++LR+E + QLL + RM AL LI +++ +VA +CGY SVS F Sbjct: 212 ALAMSESTLRRRLRQEGVRFEQLLLDIRMHHALMLIQTTHWNLAQVADACGYKSVSRFTE 271 Query: 227 VFRNYYGMTPTE 238 FR +G +P + Sbjct: 272 RFRYRFGNSPAQ 283 >UniRef50_A8S4U5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4U5_9CLOT Length = 407 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECR 194 L+ P +R + T I ++A + TLA IA + +SPS L + RE S S +T+ R Sbjct: 296 LDQYSPLVR-KAVTYIRIHLADQLTLAGIAKGIRVSPSYLSRLFNRETGDSVSNFITKAR 354 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 +++A L+ G SI+ +A G+ ++YF F+ Y MTPTEY+ S+ Sbjct: 355 VEKAAGLLSFSGMSIQNIAFYVGFGDLNYFSRCFKKYKKMTPTEYRASSS 404 >UniRef50_A1TWU6 Transcriptional regulator, AraC family n=2 Tax=Marinobacter RepID=A1TWU6_MARAV Length = 347 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 57/100 (57%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 RV VI + LAR+AS L +S LK++L+EEE S+ L+ + R++RA L+ Sbjct: 243 RVRRVIETSHPFPPKLARVASTLYVSERTLKRRLQEEEASFQALVDQVRLERARDLLAST 302 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 ++ ++A S GY + F F+ + G++P+ ++ R Q Sbjct: 303 TMNLSQIADSLGYADAANFTRAFKRWTGLSPSHFRNRELQ 342 >UniRef50_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CBW2_9BACE Length = 1319 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 72/117 (61%), Gaps = 2/117 (1%) Query: 134 LLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLT 191 L + L ++ R+ I N+++ E+++A ++ +++MS L +KL+ S + + Sbjct: 1203 LTITPLDEDLLNRILACIEKNLSNSEYSIADLSKDVMMSRMNLYRKLQAITGQSPTDFVK 1262 Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 R+++A QL++ + ++I VA + G+++ SYF VF+ +G+TPT+Y E+S Q ++ Sbjct: 1263 TIRLKKAAQLLLENRYTIVEVAYTVGFNTPSYFTRVFKEQFGITPTQYLEKSGQNVT 1319 >UniRef50_P43460 HTH-type transcriptional activator csvR n=12 Tax=Escherichia RepID=CSVR_ECOLX Length = 301 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 59/94 (62%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 +V VI +++ +WTLA IA +S ++K+L E+T+++Q+L + RM +A L++ + Sbjct: 167 KVRGVIEKDLSRKWTLAIIADVFNVSEITIRKRLESEDTNFNQILMQSRMSKAALLLLEN 226 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + I +++ G S SYFI +F ++G+T + + Sbjct: 227 SYQISQISNMIGISSASYFIRIFNKHFGVTRSSF 260 >UniRef50_A6T768 Bacterial regulatory protein, AraC family n=48 Tax=Enterobacteriaceae RepID=A6T768_KLEP7 Length = 262 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 17/224 (7%) Query: 21 MVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRDTLSL---FLPMLKEEALNLHA 75 +V GE R +V ++ V EN +F S D LSL L K L+ Sbjct: 44 IVQGESRVLATPQQLIVLPADVELEVINQPENGLFCS-DLLSLTPELLTRFKTRYLSEPP 102 Query: 76 HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR---KRALIFALLSVFLEDEHFI 132 +++SL C+ PV E+A + Q+ E L ++ LL E + Sbjct: 103 PGRLTSL----CA---PVTTELAFMWQSVLQAVREGLSVALQQHQTMGLLLALYEAGYAG 155 Query: 133 PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTE 192 PLL+ Q ++ +V +I + A W+++R+A L + S L+++L++E S+ Q++ E Sbjct: 156 PLLVE-RQQDLSAQVRQLIMLSPAQAWSVSRVAKMLFLGESTLRRRLQQESQSFRQIVEE 214 Query: 193 CRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 RM AL + I +A + GY S S F FR +YG+ P Sbjct: 215 VRMAHALGQLQTTSRPIGEIAQNSGYQSGSRFTARFRQHYGLLP 258 >UniRef50_Q4KDB9 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KDB9_PSEF5 Length = 363 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 58/106 (54%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199 +P +V ++N + +A ++ SPS L+++LR ++TSY QLL E R RA Sbjct: 248 RPTWIDQVRRILNEQLHAVPDFDSLARQVHCSPSTLRRRLRAQDTSYQQLLDELRYARAQ 307 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 QL+ H I R+A + G+ + F + F+ + G+ P +++ + Q Sbjct: 308 QLLGQHSLPIYRIAEALGFKETASFRHAFQRWSGVAPGRFRQLAGQ 353 >UniRef50_C4GLE7 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GLE7_9NEIS Length = 264 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 51/89 (57%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209 +I ++A W +A +A L MS + L+++L E S+ +LL +M RAL L+ + Sbjct: 171 LIAQDMAASWQIADVAQRLGMSEATLRRRLANEGASFRELLGNIKMMRALTLLQTSPLGV 230 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +VA + GY S + F FR ++G TP++ Sbjct: 231 AQVAYAVGYESPARFAAKFRAHFGCTPSD 259 >UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein n=10 Tax=Vibrio RepID=Q7MEL5_VIBVY Length = 275 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 13/156 (8%) Query: 100 LSQNKNLRYAEMLRKRA------LIFALLSVFLEDEHFIPLLLNVL----QPNMRTRVCT 149 + Q K++ E+ RK+ L AL+++ +E + P LLN++ Q + ++ Sbjct: 119 IDQLKDMLIEEVERKQNSQAQEHLALALMALMVEKQ---PELLNMIIRATQFSETQKIIQ 175 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209 I +NI E +L +A + MS + LK++L EE S+SQLL R+ A + + SI Sbjct: 176 FIESNIEEEISLETLAKHMGMSTATLKRRLAAEEMSFSQLLKIKRISHAATQLRVTDKSI 235 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 +A G+ S ++F F+ MTP E++ + Q Sbjct: 236 TTIAYESGFKSAAHFSTAFKAVQQMTPKEFRAKVQQ 271 >UniRef50_A6GTF5 Transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTF5_9BURK Length = 342 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Query: 134 LLLNVLQP-NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTE 192 LLL +P N RV ++ +N WT ++AS +S L + LR+E+TSY Q L + Sbjct: 229 LLLEQRRPSNWAARVTELLRSNPGQIWTCEQVASHFHLSSRTLMRYLRDEQTSY-QTLRD 287 Query: 193 CRMQRALQL-IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + R +L +++ +++ VA+S GY VS F F+ ++GM+P + E+S Sbjct: 288 SELARQAKLSLLVSNNTVESVALSLGYQEVSNFRRAFKRWFGMSPQAFIEQS 339 >UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF84_VIBFU Length = 248 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 20/247 (8%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 G ++AYA H Y+ + + + A IRVD +V + +++P Sbjct: 3 GPPVLAYA-HDYMHGDTEAAHEH-QCAQFLHALNGVIRVDTAAGTWVVTANK--GMWIPA 58 Query: 66 LKEEALNLHAHKKVSSLLVHHCSR-DIP---VFQEVAQLSQNKNLRYAEMLRKRAL---- 117 +L + H KV +L V +R D+P V EV L ++ + + +R Sbjct: 59 GVSHSLRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTRE 118 Query: 118 --IFALLSVFLEDEHFIPLLLNVLQPNMRTRV--CTVINNNIAHEWTLARIASELLMSPS 173 IF L + E P+ + P+ + C +++ IAH WT A L S Sbjct: 119 ERIFEL--ILDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSER 176 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + +K ++E ++++ L + R+ AL+L+ G S+ A+ GY S S F +F++ Sbjct: 177 TVSRKFQQELGLTFTEWLRQKRLVHALELLA-SGHSVLDSALEIGYDSPSAFSAMFKSRI 235 Query: 233 GMTPTEY 239 G+TP+EY Sbjct: 236 GLTPSEY 242 >UniRef50_B5JTW9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTW9_9GAMM Length = 350 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%) Query: 142 NMRTRVCTVINNNIAHEW-----TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196 N+R V ++ I +W TL ++A +L MSP LK++L+ TSY Q+ R + Sbjct: 242 NVRNDVAGMVRLQI-QDWEGRLPTLEQVAEQLHMSPRTLKRRLQTAGTSYQQIKDSSRFR 300 Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 RA+ + S++ +A GY S F F+++ MTP+E+++R +Q Sbjct: 301 RAIHQLEATDSSLESIAELLGYSDASNFTKAFKSWAEMTPSEFRQRLSQ 349 >UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUQ5_DESHD Length = 427 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 1/93 (1%) Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGF 207 + I +N A T+A A L +SPS L + R++ + +++ LT R+++A++L+ F Sbjct: 331 SFILHNHAQPLTIADAAQHLFISPSHLSRLFRQQLDCTFNDYLTRVRVEKAVELLKKPEF 390 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S+K VA++ G+ + S+F VFR Y G+TP Y+ Sbjct: 391 SVKDVALAVGFQNQSHFAKVFRKYIGVTPLVYR 423 >UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C05 Length = 511 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRAL 199 P + R+ ++ + ++ L IA + ++P+ L ++E + + +T+ RM++A Sbjct: 403 PRIVERIKNIVRDEYRNDIGLEDIAERVNLAPAYLSYLFKKETGANLVKYITDYRMEQAR 462 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 +L+ I VA +CGY + YF +F+NYYGMTP +Y+E++ ++ Sbjct: 463 KLLEEGELKIVLVAKACGYENQPYFNRLFKNYYGMTPRQYREKNGKQ 509 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 8/118 (6%) Query: 135 LLNVLQPNMRTR-----VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188 L+N L + +TR I+ + + +L +A + ++PS +E+ + ++S+ Sbjct: 142 LINALDRHPQTREPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSE 201 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 LT RMQRA +L++ ++ +A CGY + YFI++F+ G TP+ Y R +Q+ Sbjct: 202 YLTRRRMQRAKELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSY--RKSQK 257 >UniRef50_D2TIS0 Transcriptional regulator of virulence RegA n=5 Tax=Enterobacteriaceae RepID=D2TIS0_CITRO Length = 276 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 52/90 (57%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209 +I +++ W L +A+ L MS ++KKL +E +++ L+ + RM A +LI I Sbjct: 179 IIEADLSRSWRLVDLANILHMSEVSIRKKLEKESNNFNALVLDIRMYHAAKLITTSDKHI 238 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +A GY S SYFI F+ ++G+TP ++ Sbjct: 239 NSIANEVGYTSTSYFIRNFKEFFGITPKQF 268 >UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vibrio RepID=D0MC89_VIBSE Length = 269 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 10/154 (6%) Query: 96 EVAQLSQ---NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP----NMRTRVC 148 EVAQL N R A + + ALLS+ +E E P +L+++ + + Sbjct: 113 EVAQLKDTLVNLASRNAPDYTQGHIAMALLSLMVEVE---PNILSIIDDASSLSDSQKAI 169 Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFS 208 I NNI + TL +A+ + MS + LK++L E+ S+SQ+L R+ A + + S Sbjct: 170 KYIENNIEKDITLEGLAAHMSMSIATLKRRLAAEDLSFSQILKVKRINFAATQLRMSEKS 229 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 I +A G+ S ++F F++ Y MTP +++ + Sbjct: 230 ITEIAFESGFKSAAHFSTAFKSVYNMTPKDFRNQ 263 >UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TS33_CLOP1 Length = 506 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198 + ++ +V +I N + E +L IA ++ +P+ L ++E S + +T+ RM +A Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + + I +V +CGY + SYF +F+NY+G+TP +++ +++ Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKNS 506 >UniRef50_A5F384 TCP pilus virulence regulatory protein n=21 Tax=Vibrio cholerae RepID=TCPN_VIBC3 Length = 276 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 15/172 (8%) Query: 72 NLHAHKKVSSLLVHHCS-RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130 NL++ K LL+ +C DI V EV ++ + + Y++ K + F+ +E ++ Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEV--VNGFREINYSDEFLK--VFFSGFFSKVEKKY 159 Query: 131 ---FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYS 187 FI L+ ++ ++ ++ ++I W A I EL + +LKK+L + Sbjct: 160 NSIFITDDLDAME-----KISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFR 214 Query: 188 QLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +L+ R+ ++ L+ F IK++A G+ SVSYF VF++ + P+EY Sbjct: 215 ELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 >UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T3_ABIDE Length = 534 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQ 200 NM R+ +N + + TL +A + MS + + + L++ S+ QLL RM A + Sbjct: 432 NMAKRILDYLNEYYSEDLTLDSVADKFHMSKTYISRILKKYTNQSFLQLLISRRMDIARK 491 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +I F + +A GY+ SYFI VF+ YG+TP EY+ Sbjct: 492 MIAEDKFKLYEIAEKVGYNDFSYFIQVFKKKYGVTPNEYR 531 >UniRef50_Q21JI5 Transcriptional regulator, AraC family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JI5_SACD2 Length = 344 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 45/79 (56%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +AS+L MS + L++KL+ + TSY +L ECRM+ A L+ S +A G+ S Sbjct: 266 VASQLHMSTTTLRRKLQNDNTSYQRLKDECRMEAAFHLLNCADLSNNEIAQKLGFDEPSA 325 Query: 224 FIYVFRNYYGMTPTEYQER 242 F F+ + G TP EY+ R Sbjct: 326 FFRSFKKWTGQTPGEYRAR 344 >UniRef50_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibrio parahaemolyticus RepID=A6B6J4_VIBPA Length = 241 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 22/232 (9%) Query: 12 YARHKYILTM-VNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEA 70 + RH +I+++ +G + N V + + K + F F S + S+ + + Sbjct: 18 FTRHNHIVSVDGDGILSFQNNITKVKPNEAIFIPSKVMVRFSFNSNENKSIKVSLYHING 77 Query: 71 LNLHAHK-KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129 +NL+ + KV+SL I + EV +L+ L R I L+ LE Sbjct: 78 INLNCKQDKVTSL--------INAYIEVEKLN----------LTNRETIIELIGSRLEKI 119 Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQL 189 +L N P + ++ +++ ++ +W+L + S S L +KL++ +TS Q+ Sbjct: 120 KNNRVLYN-YDP-LEKKIYRLVSKDLKKKWSLEEVCKLTYTSKSTLNRKLKDNQTSMGQI 177 Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ R+ A LI S+ +++ G++S SYF F+ +G +P +Y++ Sbjct: 178 ISNARLDYATILITNTSLSVDEISMLSGFNSTSYFCKKFKESHGFSPKQYRK 229 >UniRef50_C6LB63 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB63_9FIRM Length = 517 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 39/61 (63%) Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S+S +TE RMQ+A + ++ + IK +A GY +YFI F+ +YG TP EY++ SA Sbjct: 456 SFSGYMTELRMQKAKEFLISTDWKIKEIASKTGYRDANYFIRAFKKFYGYTPEEYRKLSA 515 Query: 245 Q 245 Q Sbjct: 516 Q 516 >UniRef50_Q5ZTY8 Transcriptional regulator OruR, AraC family n=4 Tax=Legionella pneumophila RepID=Q5ZTY8_LEGPH Length = 337 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Query: 139 LQPNMRTRVCTV-INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197 L+ +M +++ ++ IN N+ H ++ IAS L M+ L++ L+ + +Y +LL E R Q+ Sbjct: 230 LKEDMASKIKSILINQNLNH-VSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQK 288 Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 A ++ + S+ + G+ S F F+ + G+TPTEY+E+ Sbjct: 289 AKTFLLNNNISMTEICFLLGFQDTSNFSKAFKRWTGITPTEYREK 333 >UniRef50_A4TFK9 Transcriptional regulator, AraC family n=11 Tax=Actinomycetales RepID=A4TFK9_MYCGI Length = 346 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 R+A EL +S S LK++L EE T++ +L C + A+ L++ S ++A GY ++ Sbjct: 265 RVADELSVSTSTLKRRLAEEGTTFRELRQSCLRESAMMLLITRSMSASQIATELGYGDLA 324 Query: 223 YFIYVFRNYYGMTPTEYQERSAQR 246 F + F+ + G +P+EY R +QR Sbjct: 325 NFSHAFKRWTGRSPSEY--RRSQR 346 >UniRef50_Q2SCQ2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCQ2_HAHCH Length = 276 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 + R +V V+ A +W+L I+ L +S S L+++L+ E + LL R+ L L Sbjct: 165 SWRRKVSEVLMQEPAKDWSLLEISRLLAVSESTLRRRLQSENAGFRDLLESVRLGIGLHL 224 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249 I +A CGY S S F F+ +GMTP+E ++ + L Sbjct: 225 AQTTLLPIAHIADQCGYQSQSRFTERFKQRFGMTPSELRQTRLEELGE 272 >UniRef50_B1Y1K0 Transcriptional regulator, AraC family n=2 Tax=Betaproteobacteria RepID=B1Y1K0_LEPCP Length = 317 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 14/140 (10%) Query: 109 AEMLRKRALIFALLSVF---LEDEHFIPLLLNVLQPNMRTRVCTVINNNIA-HEWTLARI 164 AE + RAL+ A+L+ L+D P + +P + R+ +I N + HE ++ R+ Sbjct: 176 AEEQQARALVMAVLAGVRRALDDVTSAP---SAGEPPLIARLRVLIQNQLGDHELSVRRL 232 Query: 165 ASELLMSPSLLKKKLR----EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 A + S L + R E +Y L RM+RA L+ ++K VA +CG+ S Sbjct: 233 AEQSGCSADHLSHRFRLTAGEHLVAY---LNRQRMERAAHLLADTDLAVKEVAWACGFAS 289 Query: 221 VSYFIYVFRNYYGMTPTEYQ 240 SYFI FR ++G TP ++ Sbjct: 290 ASYFIRTFRAHHGETPVAWR 309 >UniRef50_C2ELJ2 AraC family transcriptional regulator n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2ELJ2_9LACO Length = 700 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 4/122 (3%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECR 194 L+ L+ ++ ++ + N TL + A EL ++P L ++ T+Y L E R Sbjct: 145 LSSLESPLKIKIKNFVQQNFTENITLEKTAQELNITPQYLSNYFKDHFRTTYIHYLNELR 204 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAA 254 + +++QL+ + I VA G++SVS F +F+N YG++P +++++ N+D Sbjct: 205 LDKSIQLLNDSNYKIVNVAFDSGFNSVSTFNRLFKNRYGISPLVWRKKNN---INKDELK 261 Query: 255 SI 256 I Sbjct: 262 DI 263 >UniRef50_B3C5Z2 Sensor protein n=2 Tax=Bacteroides RepID=B3C5Z2_9BACE Length = 1382 Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 3/136 (2%) Query: 107 RYAEMLRKRALIFALLSVFLE-DEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARI 164 R A +L R I +L+S + I LN + R+ +I N+ E + I Sbjct: 1242 RVANLLEGRKKIASLISSSTHLKQSIIKESLNKIDNEFIERITRIIEENLMDEKIDVPTI 1301 Query: 165 ASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 A EL MS S L +K++ S + + + R+++A QL++ ++I +A G +SVSY Sbjct: 1302 AQELSMSYSSLYRKIKALTGMSTGEFIRKLRLRKAEQLLLSGKYNISEIAHQVGLNSVSY 1361 Query: 224 FIYVFRNYYGMTPTEY 239 F F+ YGM+P+EY Sbjct: 1362 FRECFKEEYGMSPSEY 1377 >UniRef50_A6VXK4 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Oceanospirillaceae RepID=A6VXK4_MARMS Length = 353 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLA-RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 +++++V ++ + + E A +AS L MS S L+++L +E+TSY + +CR + A+ Sbjct: 239 SLKSQVMAMLGKDFSREMPSADEVASALNMSVSTLRRRLNDEKTSYQSIKDDCRKEAAIT 298 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + SI +A G+ S F F+ + GMTP EY++ Sbjct: 299 YMNAPQLSINDIAALMGFDEPSAFFRSFKKWTGMTPGEYRK 339 >UniRef50_D2EZ28 Sensor protein n=1 Tax=Bacteroides sp. D20 RepID=D2EZ28_9BACE Length = 1354 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Query: 136 LNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 +N L R+ +I +N+ E +A IA ++ MS S L +K++ + S ++ + + Sbjct: 1245 MNPLDNEFVQRITQIIEDNLEMEKMDIAFIADQMCMSHSTLYRKIKGVADMSANEFIRKV 1304 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +M+ ++L++ +SI ++ G+ SV+YF F+N +GMTP+EY Sbjct: 1305 KMKNGVKLLLSGKYSISEISYMTGFSSVAYFRQCFKNEFGMTPSEY 1350 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVI 204 R IN N + +L ++ E+ +SP K ++E ++ + LTE R++ A +L+ Sbjct: 432 RAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARELLQD 491 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 SIK + GY +YF +F+ Y G+TP+E++ER Sbjct: 492 SRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_UPI00016A75A2 transcriptional regulator, AraC family protein n=3 Tax=pseudomallei group RepID=UPI00016A75A2 Length = 336 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 47/82 (57%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 +LAR+AS L +S LK++LRE TSY ++L + R + A L+ S+ V+ GY Sbjct: 253 SLARLASSLFLSERTLKRRLREHGTSYREMLEKARYRDACALLRETDLSLADVSAKLGYQ 312 Query: 220 SVSYFIYVFRNYYGMTPTEYQE 241 + F FR + G+ P+ Y++ Sbjct: 313 NPPTFTRAFRRWSGIAPSRYRD 334 >UniRef50_A7VPJ4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPJ4_9CLOT Length = 264 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%) Query: 159 WTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 WT+ ++AS + +SPS ++ ++ S L + RM RA+Q++V+ + + ++A+ CG Sbjct: 177 WTVKKMASFVNLSPSYVQSLYKKFFHISCVADLIKSRMDRAIQMLVVTDYPVNKIALLCG 236 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQER 242 Y S YF F+ GMTPTEY+++ Sbjct: 237 YESNIYFSRHFKAKIGMTPTEYRQK 261 >UniRef50_B4X4H5 Transcriptional regulator, AraC family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4H5_9GAMM Length = 348 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 51/88 (57%) Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRV 212 N+A +L ++A+ L SP+ LK++LR++ Y QLL + R+ +A+ + HG+S ++V Sbjct: 248 QNVASPPSLQQLANPLQCSPATLKRRLRDQGCHYQQLLDQARLHQAIHWLQFHGYSTEQV 307 Query: 213 AVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 A + + F F+ + G+TP Q Sbjct: 308 ARQLNFTDSTNFRRSFKRWSGLTPAACQ 335 >UniRef50_A7VU71 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU71_9CLOT Length = 289 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVI 204 +V +N N E L I+S+ +SP L + + + ++ ++ R+Q+A +L++ Sbjct: 183 KVIKYVNENYTLEIGLQEISSKFFLSPDYLSTQFKVKTGKNFKDYISNLRIQKAEELLMC 242 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 F I VA GY+ YFI VF+N G TP+++ R ++R +R Sbjct: 243 SEFKISEVAELMGYNDSGYFIKVFKNKLGCTPSQF--RESKRRDDR 286 >UniRef50_P0A2T2 Virulence regulon transcriptional activator virF n=9 Tax=Enterobacteriaceae RepID=VIRF_SHIDY Length = 262 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 53/94 (56%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 ++ ++ NI W L+ I++ L +S ++K+L E+ ++ Q+L + RM A +L++ Sbjct: 162 QIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLLLNS 221 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 I V+ G S SYFI F YYG+TP ++ Sbjct: 222 QSYINDVSRLIGISSPSYFIRKFNEYYGITPKKF 255 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 13/143 (9%) Query: 112 LRKRALIFALLSVFLED---EHFIPLLLNVLQ--------PN-MRTRVCTVINNNIAHEW 159 +R + L+ ALL+ E+ + F+ ++ + Q P+ + TR I N + Sbjct: 381 VRDQELLSALLAAGEEETARQKFVAAMVELAQAVVIKNQEPDGIITRAQDYIRQNFRKDI 440 Query: 160 TLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 +L +A + +SP K +EE ++++ LT R++ A +L+ SIK+V V GY Sbjct: 441 SLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGY 500 Query: 219 HSVSYFIYVFRNYYGMTPTEYQE 241 + +YF +F+ + G+TPTE+++ Sbjct: 501 ANPNYFSRIFKKWVGITPTEFRD 523 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVI 204 + IN N + E TL++I+S +P K ++ S+ LT+ R+Q+A QL+ Sbjct: 415 KAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKN 474 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 SIK ++ + G+ +YFI F+ + GMTP+ ++ S Sbjct: 475 TSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFRSSSVD 515 >UniRef50_D2QI98 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI98_9SPHI Length = 251 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 155 IAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 + ++++ + A L MS S LK++L+ ++++S L+ E R+++A L++ +S+++++ Sbjct: 156 VNSDFSIEKAALNLFMSTSTLKRRLKNYLDSNFSDLVKEFRLKKADNLLLNSDYSLEQIS 215 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 V CG+ S+SYF F+ Y + P +Y+ R Sbjct: 216 VLCGFSSLSYFSRSFKASYKINPNQYRHR 244 >UniRef50_Q21KL2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q21KL2_SACD2 Length = 270 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 P++ +V +I+ ++ ++WT+ I +L MS S +++KL E TS + R+ L Sbjct: 165 PSLSAKVHAIISTDLTYDWTMDVITQKLAMSESTIRRKLTAEGTSLQAVKDSARLSFGLH 224 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + I +A CGY S S F F+ +G+TPT Sbjct: 225 QVQSTFQPINHIAEQCGYLSQSRFTNKFKQLFGVTPT 261 >UniRef50_C6J5Q8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5Q8_9BACL Length = 276 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIH 205 + + + TL IA + SP+ L +EE +S++LTE RM+RA +L+ Sbjct: 179 IIATMQARLHENLTLKNIAQQFAFSPNYLGHLFKEETGQGFSEMLTELRMERARKLLKDP 238 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 I VA GY + YF F+ +GMTP E+++R Sbjct: 239 KVKIYEVAGQVGYRYIPYFSRQFKETFGMTPMEFRKRE 276 >UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes RepID=A4CH85_9FLAO Length = 706 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 14/139 (10%) Query: 129 EHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLREEET-SY 186 EHFI +R T++ NIA E + ++ +A + MS S L +K+R+ S Sbjct: 16 EHFI------------SRAETLLLENIARENFGVSELAEAMNMSRSSLLRKVRKHTGLSA 63 Query: 187 SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 SQ + + R+++ ++++ ++ V+ G+ S SYFI FR +YG P E ER+ + Sbjct: 64 SQFIRQVRLKQGMEMLRQTTLNVTEVSYRVGFGSTSYFIKCFREHYGYPPGEAAERALEN 123 Query: 247 LSNRDSAASIVAQGNFYGT 265 S + + A + +GT Sbjct: 124 ASAEPGDSPMEAGASAHGT 142 >UniRef50_C0Z962 Probable two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z962_BREBN Length = 234 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 6/105 (5%) Query: 145 TRVCT----VINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRAL 199 TR+ + +I+ A + LA +A+E+ ++P+ L ++ EE S+S+ L + R+Q + Sbjct: 127 TRIISDAMNIIHQKFAEKLNLADLAAEVHINPTYLSRRFHEEVGVSFSEYLMQYRIQMSK 186 Query: 200 QLIVIH-GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + ++ H +SI VA G++S YF +FR G TP EY+++ Sbjct: 187 KFLIAHPDWSISTVAERTGFNSQHYFSTIFRKVVGKTPKEYRDKG 231 >UniRef50_C4G4F0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4F0_ABIDE Length = 512 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIV 203 T++ + IN+N + ++ ++S+L S + + +++ T+ S+ +TE R+ +A QL++ Sbjct: 409 TKILSYINDNYKSQAIVSELSSKLFFSRNYISALFKKDTGTTISRYITEVRLCKAKQLLL 468 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 SI +A+ GY +S+F VF+ YG +P EY+++ Sbjct: 469 GTSLSISEIALDTGYFDISHFSRVFKEEYGDSPLEYRKK 507 >UniRef50_Q5LKF5 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKF5_SILPO Length = 331 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 49/81 (60%) Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 +A++A +L ++P L+++L+ + YS + + R A++L+ G S++ +A G+ Sbjct: 248 MAQVARDLNLAPHTLRRRLKGDGVDYSNIRKQVRRDMAVRLLATTGDSVESIAAQTGFSE 307 Query: 221 VSYFIYVFRNYYGMTPTEYQE 241 S FI FR++ G+TP Y++ Sbjct: 308 ASAFIRAFRSWTGLTPRAYRK 328 >UniRef50_Q0VN05 Transcriptional regulator, AraC family n=2 Tax=Alcanivorax RepID=Q0VN05_ALCBS Length = 342 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 56/100 (56%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202 M R+ + + ++ A +L +A L +S LK+ L++ SY QL E R Q+A +L+ Sbjct: 242 MARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRLL 301 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 V SI VA GY+ V+ F F+ + GMTP+ Y+E+ Sbjct: 302 VQSENSISEVAYRLGYNDVANFSKAFKRWSGMTPSAYREK 341 >UniRef50_A6KXQ8 Sensor protein n=2 Tax=Bacteroides RepID=A6KXQ8_BACV8 Length = 1340 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 98 AQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH 157 A+L ++ E +K A + AL + + E + L N L ++ +I N+ Sbjct: 1193 AKLLHSRINNLLETRKKIASLLALADIQPKQESAVSSL-NKLDNEFLQKITQIIEENLEM 1251 Query: 158 E-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVS 215 E +A IA ++ MS S L +K++ + S ++ + + +M++ ++L++ ++I +A Sbjct: 1252 EKMDIAFIADKMCMSHSTLYRKIKGLTDMSANEFIRKVKMRKGVELLMSGQYTISEIAYM 1311 Query: 216 CGYHSVSYFIYVFRNYYGMTPTEY 239 G+ SV+YF F++ YGM+P++Y Sbjct: 1312 IGFSSVAYFRQCFKDEYGMSPSDY 1335 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 12/150 (8%) Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVI---NNNIA 156 S++ +LR AE L AL ++ + F + ++++ R +C I N Sbjct: 272 FSESDHLRTAEEL---ALWLTRMT-----DRFTDTVFSLVEVKHRDIICKAIEYLKRNCR 323 Query: 157 HEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVS 215 TL A + +SPS + +EE S++ LT R+ R +++ SI + Sbjct: 324 DRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGRAMLLDTDASIAEICDR 383 Query: 216 CGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 CG+ SYF VFR Y G+TP ++ R + Sbjct: 384 CGFDDQSYFTKVFRKYTGVTPGRFRARRGR 413 >UniRef50_A6GMI7 Putative transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GMI7_9BURK Length = 340 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 154 NIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 +++ +LA+IA++ M+ L+++L +E TSY LL E R A +L+ G S+ V+ Sbjct: 244 DLSSSPSLAQIATDHFMTERTLRRRLTDEGTSYRDLLAEVRQTMAEELLSSTGLSVSEVS 303 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQE-RSAQ 245 GY S S FI+ F+ ++ +P ++ + RS Q Sbjct: 304 ARLGYSSPSAFIHAFQKWHNCSPRQFLDARSKQ 336 >UniRef50_Q15UT2 Sensor protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UT2_PSEA6 Length = 1341 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 141 PNMRTRV-CTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 PN ++ +I + E+T+ ++A L MS L +K + E + + Q +TE RMQ A Sbjct: 1238 PNFTDKLRSNIIQHLTDPEFTVDQLAESLAMSRRSLSRKCQSECQQTIVQFMTEVRMQSA 1297 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 L+L+ S+ +A GY S+SYF F+ +YG P+ Sbjct: 1298 LKLLNESKLSVSEIAYGTGYESLSYFSRTFKKFYGKAPS 1336 >UniRef50_C5CTH9 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTH9_VARPS Length = 313 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 29/245 (11%) Query: 21 MVNGEYRYFNGGDLVFADASQIRV--DKCVENFVFVSRDTLSLFLPMLKEEALNLHA--- 75 +V G R F G L F ++ V + V+ D P L EAL+L Sbjct: 43 VVGGAVRPFTAGHLSFVLPYRVHVVPHPPGARYAIVNFDQ-GFLWPELAVEALDLEEVPA 101 Query: 76 --HKKVSSLLVHH----------CSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 +++ L +R + E+A L N+ R+ + R ++ L++ Sbjct: 102 ARQPELAPFLFQEYMDFHFGDADFARILGWLDELAAL--NRERRFGAVGAIRGILLQLMA 159 Query: 124 VFLEDEHFIPLLLNVLQPNMRT-------RVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + H PLL + R+ RV + ++A E +L A+ ++SP+ L Sbjct: 160 LACH-RHEAPLLAQAALQSGRSAGHDALQRVMRYVREHLAEEMSLNDAAAAAMLSPNYLA 218 Query: 177 KKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 L+++ + ++++L+TE R++RA +L+V I +A CG+ YF FR G+T Sbjct: 219 HLLKKQTQRTFTELVTERRLERAKELLVTSNARIGDIARQCGFGDAVYFSRRFRLQSGVT 278 Query: 236 PTEYQ 240 P +++ Sbjct: 279 PRQFR 283 >UniRef50_Q7NTA1 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTA1_CHRVO Length = 266 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 46/84 (54%) Query: 154 NIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 + A W++ A L + S L+++L EE+ + +L E RM ALQ + SI ++A Sbjct: 177 DPAAPWSVETAARRLNLGASTLRRRLAEEDAGFQAILEEVRMGLALQQVQDGRRSIAQIA 236 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPT 237 + GY S S F FR YG+TP+ Sbjct: 237 EASGYASASRFAARFRQRYGLTPS 260 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIH 205 V I+ N ++ TL +A + S S L K ++E ++++ +T+ R+ +A ++++ Sbjct: 147 VVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINS 206 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 SI +A S GY+ +YF VF+ MTP+EY+ S Sbjct: 207 NISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYRTNS 244 >UniRef50_C2LMQ1 Virulence regulon transcriptional activator VirF n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LMQ1_PROMI Length = 263 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 132 IPLLLNVLQPNMRT-RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190 IP L+ +P + + +V +I +++ H W+L I+S+L +S S L+KKL E+T++ LL Sbjct: 145 IPNLILKSKPELTSVKVKDIIISDLQHSWSLKEISSKLFISESSLRKKLEAEKTNFMTLL 204 Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 T RM A+ L+ +I +++ GY + S Sbjct: 205 TTVRMAHAMNLLATTNLTIGQISSLSGYKNTS 236 >UniRef50_A6CZX1 Transcriptional regulator, AraC family protein n=2 Tax=Vibrio RepID=A6CZX1_9VIBR Length = 286 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 3/97 (3%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIV 203 ++ ++N+ + + TLA++A E+ +S S +K + + S Q LT+ R+Q + Q Sbjct: 184 SKAIRIMNSPMGLKMTLAQVAEEVGLSQSSFSQKFKAATQLSPKQYLTQLRLQSSKQ--S 241 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ S+ A GY ++S++I +F+N YG+TP +YQ Sbjct: 242 LNKLSVTDAAYEAGYDNISHYIRLFKNAYGLTPKQYQ 278 >UniRef50_A3K7B6 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A3K7B6_9RHOB Length = 343 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 45/79 (56%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 TL R+A+ L M P L+++L E TS L+ + R +RA +L+ + G + VA + GY Sbjct: 257 TLDRVAAALHMGPRTLQRRLAAEGTSLRALVDDIRYRRAARLLALPGARVGHVAQALGYT 316 Query: 220 SVSYFIYVFRNYYGMTPTE 238 + F +R + G TP+E Sbjct: 317 DPTAFWRAWRGWTGETPSE 335 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVI 204 R C I + A + L IA + +S + + + ++E +Y++ L + RM++A +L+ Sbjct: 438 RACEYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMNYNEYLMQVRMEKAKELLKR 497 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + A GY + SYFI +F+NY G++P+EY E+ Sbjct: 498 QTLKVADAAALVGYSNTSYFIKLFKNYTGLSPSEYMEQ 535 >UniRef50_D2LZT6 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT6_BACS4 Length = 512 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Query: 156 AHE-WTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 +HE +L ++A ++ +SP + K +E+ +Y LTECR+++A QL+ SIK + Sbjct: 419 SHEDISLDKLAKKVGLSPIYMSKLFKEKLGVNYIDFLTECRIEKAKQLLKRPDKSIKEIT 478 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 GYH +YF VF+ G++P EY++ Sbjct: 479 FDVGYHEPNYFSKVFKKMCGVSPKEYRK 506 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 32/239 (13%) Query: 18 ILTMVNGEYRYFNGGDLVFADASQIRVDK-----CVENFVFVSRDTLS--LFLPMLKEEA 70 + T G + N G+L + ++ + D +E F S D + LF PM Sbjct: 58 LFTGTGGSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPM----- 112 Query: 71 LNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ-----NKNLRYAEMLRKRALIFALLSVF 125 + S +++ H ++ E+ L + NK + L + L+ +LS Sbjct: 113 -------RSSHVILTHSLPYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNI 165 Query: 126 LEDEHFIPLLLNVLQPN---MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 L IP +L N MR + T +N+N + TL+ +A E MS + + ++ Sbjct: 166 LS----IPDILVKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKH 221 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++S+ + R+ A L+ SI VA+S G+ +VSYFI F+ YG TP Y+ Sbjct: 222 FNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSI 209 + N + E +L ++ E+ +SP K +EE ++++ LT R+ +A +L+ SI Sbjct: 436 MQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAKELLENPELSI 495 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 K + V GY +YF +F+ + G+TP EY+ER Sbjct: 496 KEIGVMSGYTDPNYFSRIFKKHTGITPREYRER 528 >UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH Length = 255 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIH 205 + T NN+ +L +AS++ +S L +K REE S Q R+ RAL+L+ Sbjct: 166 LATPENND-----SLLALASDIGLSERTLTRKFREETGLSLGQWRQLARLARALELLA-Q 219 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 G S+ + A+ GY SVS FI +FR Y+G TP Y Sbjct: 220 GVSVTQTALDLGYDSVSAFIALFRRYFGETPGRY 253 >UniRef50_D1Y5U1 Putative two-component response regulator n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5U1_9BACT Length = 284 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 +L A + +SP L + REE + +L + RMQRA L+ + G S+++ A GY Sbjct: 193 SLEETAKHVGVSPGHLSRLFREEGVRFMDVLKDARMQRARGLL-LAGASVRQAARESGYG 251 Query: 220 SVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDS 252 +V+YF F+ +G+ P+ + R A N DS Sbjct: 252 NVAYFGLAFKKVFGVAPSTLRRRPALTGENPDS 284 >UniRef50_UPI0001968F18 hypothetical protein BACCELL_00802 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968F18 Length = 1345 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Query: 146 RVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIV 203 +V +IN NI++ E T+ IA E+ +S L +KL+E S L+ R+++A L++ Sbjct: 1236 KVMNIINRNISNPELTVEMIAKEIGISRVHLHRKLKELTNQSTRDLIRNVRLKQAANLLI 1295 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +S+ VA G+ S++ F F+ YGMTP+EY Sbjct: 1296 YKRYSVTEVASLTGFSSITLFSRSFKELYGMTPSEY 1331 >UniRef50_B0P9Q1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9Q1_9FIRM Length = 326 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECR 194 L+ Q N+ + T I ++ T+ ++ L +S +LLK R+ + + ECR Sbjct: 195 LDSHQLNVARQANTYILTHLDEALTIDQLTQILCVSSTLLKTSFRQLYGQPIRKYIQECR 254 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249 M+RA +L+ S+ +++S GY SVS F +F+ +Y +TP++Y+ ++ ++LSN Sbjct: 255 MRRAAELLSTTRQSVLDISISVGYGSVSQFGALFKRFYQVTPSQYRRKAEEKLSN 309 >UniRef50_Q0VLF5 Transcriptional regulator, AraC family n=2 Tax=Alcanivorax RepID=Q0VLF5_ALCBS Length = 336 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 12/123 (9%) Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHE------------WTLARIASELLMSPSLLKKK 178 + P L +L+ + R+ TV ++ IA + +L +A +L +S L++K Sbjct: 212 YDPALTRMLEQQCQQRMDTVESSGIAGKVRQKLLGELGLGASLNDMARDLALSTRSLRRK 271 Query: 179 LREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L +E TSY L+ E R Q ALQL+ I+ VA Y F+ FR + G +P+ Sbjct: 272 LEQEGTSYRDLVEEERRQLALQLLGNTTMKIEEVAAHLAYTDAGGFVRAFRRWQGCSPST 331 Query: 239 YQE 241 Y+E Sbjct: 332 YRE 334 >UniRef50_C1DBS2 AraC-type DNA-binding domain-containing protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBS2_LARHH Length = 262 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Query: 151 INNNIAHEWTL--ARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFS 208 +N + + TL A ++ L MS S L++ L +E S +L CR++RAL L+ Sbjct: 168 VNRLLGTDLTLGAAELSRRLAMSESTLRRHLADEGHSLRELREHCRLERALALVQTSSLP 227 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 I +VA +CGY S S F FR +G TP Sbjct: 228 IGQVAEACGYASASRFSARFRTRFGCTP 255 >UniRef50_A8EX63 Transcriptional regulator, AraC family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EX63_ARCB4 Length = 283 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 1/121 (0%) Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 L V +DE + N + + R+ ++ +N+ + I S +PS ++K + Sbjct: 160 FLLVLQKDEKSLIQFFNKIINTTKDRIKYILESNLDFVNSFEDICSLTRQNPSKIRKYFK 219 Query: 181 EEETSYSQL-LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +E + +L + E R+++A L+ +I ++A SCGY SVS+FI F+ Y +TP +Y Sbjct: 220 DEFNTTPKLWINEKRLEKATLLLKTTDETISQIATSCGYSSVSWFILEFKKRYNLTPKDY 279 Query: 240 Q 240 + Sbjct: 280 R 280 >UniRef50_D2YK24 Type 4 prepilin-like protein leader peptide-processing enzyme n=1 Tax=Vibrio mimicus VM573 RepID=D2YK24_VIBMI Length = 533 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 23/176 (13%) Query: 72 NLHAHKKVSSLLVHHCS-RDIPVFQEVAQLSQNKNLRYAEMLRKRAL--IFALL-----S 123 NL++ K LL+ +C DI V EV + + Y++ K F+ + S Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEVVN--GFREINYSDEFLKVFFSGFFSKVEKKYNS 161 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 +F+ D+ L+ ++ ++ ++ ++I W A I EL + +LKK+L Sbjct: 162 IFITDD------LDAME-----KISCLVKSDITRNWRWADICGELRTNRMILKKELESRG 210 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + +L+ R+ ++ L+ F IK++A G+ SVSYF VF++ + P+EY Sbjct: 211 VKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 >UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CHN4_THET1 Length = 296 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPS----LLKKKLREEETSYSQLLTECRMQRALQ 200 +RV ++ +WTL +A E+ + PS L K +L +Y L R++RA Sbjct: 186 SRVVQLLRAEADRDWTLRELAGEVALEPSYLVRLCKAQLGLPPMAY---LARLRLERAAH 242 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 L++ SI ++A G+ +YF FR Y+G+ PT Y+++ A ++R Sbjct: 243 LLLRTDLSITQIAAEVGWPDPNYFCRRFRAYFGLPPTLYRKQLASGGADR 292 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVI 204 +VC +I+N T+ ++S++ +SP+ L+ R++ + LT R+++A +++ Sbjct: 435 QVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRIRLEKAKEMLAD 494 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ +A GY S SYFI +F G+TP EY++ Sbjct: 495 PSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNEYRK 531 >UniRef50_Q7CUB1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUB1_AGRT5 Length = 246 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 59/114 (51%) Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 + L ++ +PL+ + ++ V +I + + H W+ A +A+ L MS + L+++LR+E Sbjct: 122 LILAEQGALPLMPKYVDGSVTEAVRLLIRHRLDHAWSTAAVAASLSMSEATLRRRLRDEN 181 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 S LL RMQ A ++ + + GY S S+F F++ +G P+ Sbjct: 182 QSLRALLLAERMQAAYLILSDRDADVAEAIAATGYASRSHFSRRFQDAFGQAPS 235 >UniRef50_B4SIX4 Transcriptional regulator, AraC family n=3 Tax=Xanthomonadaceae RepID=B4SIX4_STRM5 Length = 274 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 48/98 (48%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 P++ ++ I A +W + + +S + L+++L E TS QLLTE R+ + Sbjct: 176 PSLGEQIRDRIAAEPARDWQSRDVEEQFALSGATLRRRLAAERTSLRQLLTEARLAHGMT 235 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L+ +K VA GY S + F F YG+ PT+ Sbjct: 236 LLYTTDLPLKTVAARAGYRSAASFSKRFAEQYGLAPTD 273 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209 I N + TL +A + +SP L K ++E + ++ +TE +MQ+A +L+ + Sbjct: 157 IEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKELLENTDLPV 216 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNF 262 +A+ Y +YF VF+ G+TP+EY++RS + LS + + V GN+ Sbjct: 217 IHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKKHNS--VLNGNW 267 >UniRef50_A1U2D8 Transcriptional regulator, AraC family n=2 Tax=Marinobacter RepID=A1U2D8_MARAV Length = 343 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 E TL +A L + P L+ +L E ETS++Q+L + R + A QL+ SI + G Sbjct: 248 EVTLDAVAERLGIKPRTLRTRLTEAETSFNQVLADFRYRLARQLLATTDESIDEIVYLTG 307 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + S F F+ + GMTP EY+ ++AQ Sbjct: 308 FSEPSTFYRAFKRWSGMTPIEYR-KTAQ 334 >UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5740E Length = 299 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 24/156 (15%) Query: 116 ALIFALLSVFLEDEHFIPLL---------LNVLQPNMRTRVCTVIN-------------- 152 A +FA L L++ IPLL L +LQ RV I+ Sbjct: 139 ADVFARLLGLLDEPEHIPLLGPQFARETVLRLLQTTQAPRVLAAIDAHDPVVPRAVRLLT 198 Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKR 211 IA WTL +A+E+ S + L ++ ++ + + Q L R+ A +V+ G S R Sbjct: 199 ERIAEPWTLDALAAEVSASRATLSRRFKQATSMTPMQYLKRLRLGEARHRMVVRGDSAAR 258 Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRL 247 A + GY S +F +R YG +P R+ ++L Sbjct: 259 AATAVGYRSAPHFTRDYRLVYGTSPAADAARAREQL 294 >UniRef50_C6D6L1 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6L1_PAESJ Length = 788 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVI 204 ++ I NN E +L IA +L + PS + ++E ++ + R+++ +L+ Sbjct: 679 QILAYIQNNFDKEISLGGIADQLQLDPSYASRLFKQEISVTFMDYVISLRLEKTKELLKT 738 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRD 251 ++K + S GY + F +F+ Y GMTP EY++ A + N+D Sbjct: 739 SELTVKDIGASVGYANQRSFNRIFKKYEGMTPGEYRDIHAPKKLNQD 785 >UniRef50_B0NUV9 Sensor protein n=3 Tax=Bacteroides RepID=B0NUV9_BACSE Length = 1473 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 164 IASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 IA+E+ MS S+ KKL+ S + L E RM+RA QLI +S+ ++A G + Sbjct: 1388 IANEVNMSRSVFFKKLKTLTGLSPVEFLKEIRMKRAAQLIETDEYSMAQIAYMVGLNDSH 1447 Query: 223 YFIYVFRNYYGMTPTEYQE 241 YF F+ YG+TPTEY+E Sbjct: 1448 YFSKCFKQQYGITPTEYKE 1466 >UniRef50_C5C1L5 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1L5_BEUC1 Length = 284 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 133 PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLT 191 P + + P + R T + +++A WT+A +A+ +S S L ++ ++ T+ L Sbjct: 162 PSRIPAIDPAV-ARALTSMTDDVARAWTVAELAAVSHVSVSHLHRRFSDQLGTTPMGWLA 220 Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 R +RA L+V + V + G+ +Y FR YGMTPTEY+ R A Sbjct: 221 GARAERAAVLLVRTAAPVAAVGRAVGWSDPNYASRRFRGVYGMTPTEYRRRYA 273 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 37/62 (59%) Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +E S+ Q LTE R+++A L+ I GF VA G+ + SYFI VF+ Y G TP EY Sbjct: 202 KETGKSFVQYLTEYRLEKAKLLLAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKEY 261 Query: 240 QE 241 E Sbjct: 262 SE 263 >UniRef50_Q2G532 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G532_NOVAD Length = 342 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL-QLIVIHGFSIKRVAVSCGYHSV 221 RIA E+ MS +++KL EE +S+ Q+L ECRM++A+ + SI ++A+ GY Sbjct: 256 RIAREIGMSSRTMRRKLAEEGSSFQQVLDECRMRQAVFEFRTRPDLSIAQIALRLGYAEH 315 Query: 222 SYFIYVFRNYYGMTPTEYQER 242 S F F + G++P ++ R Sbjct: 316 SNFTRAFHRWSGISPHAWRAR 336 >UniRef50_Q5YRJ4 Putative transcriptional regulator n=2 Tax=Actinomycetales RepID=Q5YRJ4_NOCFA Length = 351 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 45/81 (55%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 T+ +A +L MS L+++L E TSY LL E R A +++ S+ +A+ GY Sbjct: 265 TIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRRALAEEMLTAAPLSVDDIAIRLGYA 324 Query: 220 SVSYFIYVFRNYYGMTPTEYQ 240 + FI+ F+ + G+TP Y+ Sbjct: 325 EATPFIHAFKRWTGLTPAAYR 345 >UniRef50_C9RRZ9 Transcriptional regulator, AraC family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRZ9_FIBSS Length = 313 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKK--KLREEETSYSQLLTECRMQRALQLIVIHGF 207 ++ N+ TL +++ ++ MSP+ +KK KL ++ YS L T RM++A QL++ F Sbjct: 219 ILRENVEEHLTLEQLSKQIEMSPTQMKKYFKLAYGDSIYSYLKT-YRMKKATQLLLDGKF 277 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 ++ VA GY + S F F+ Y G +P EY+ ++ Sbjct: 278 NVAEVASRVGYTNSSKFAQAFKEYTGCSPKEYKNKT 313 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S Q +T RM +A +L++ + SI + +SCG+ ++ YF VFR Y +P EY+ Sbjct: 218 SLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQ 277 Query: 245 QRLSNRDSAASIVAQGNFYGTDR 267 +R SN+ S V QG Y T++ Sbjct: 278 ER-SNKKVHESEVYQGYIYYTNK 299 >UniRef50_A1TVA8 Transcriptional regulator, AraC family n=17 Tax=Proteobacteria RepID=A1TVA8_ACIAC Length = 366 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 IA+ L +S L ++LREE S L E R QRA L+ +K VA + G+ S Sbjct: 266 IAAALHVSARTLHRQLREEGASLQALKDEARQQRARDLLQRTDRPVKAVARAAGFASEKS 325 Query: 224 FIYVFRNYYGMTPTEY-QERSAQRLSNR 250 F+ FR + GM+P EY ++R A+ + +R Sbjct: 326 FMRAFRQWTGMSPAEYRRQRCARAMESR 353 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%) Query: 93 VFQEVAQLSQNKNLRYAE---MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149 +F E+A+ + +L E +L + A++F + E PL+ ++ ++ Sbjct: 134 LFDEIAKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESL-----A 188 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFS 208 I+ ++ E L +A+ + PS KK + +Y + L R+ +A L+ S Sbjct: 189 YIDAHLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLS 248 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 I+ +A +CGYHS+ +F FR G TP Y++ S Sbjct: 249 IQAIAEACGYHSMPHFYRTFRAATGTTPAAYRKNS 283 >UniRef50_B8FMW7 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMW7_DESAA Length = 342 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 48/78 (61%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A + MSP L+++L+EE TS+ ++++ + ++A+ L+ I+++A+ GY + Sbjct: 263 LARHMNMSPRTLRRRLKEEGTSFKNIVSDVQKEKAIHLLQTTNLPIQQIALELGYEDLPN 322 Query: 224 FIYVFRNYYGMTPTEYQE 241 F F+ + G TP +Y++ Sbjct: 323 FYRAFKRWTGKTPGDYRQ 340 >UniRef50_A7VQP5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQP5_9CLOT Length = 536 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 8/96 (8%) Query: 151 INNNIAHEWTLARIASELLMSP----SLLKKKLREEETSYSQLLTECRMQRALQLIVIH- 205 I+ N A +LA +A ++ +SP SL K+L E SYS+ +T RM+ A +++ + Sbjct: 439 IHTNYAQPISLALVAEKIDVSPNYLSSLFHKELGE---SYSKYVTRVRMEHAKRIMKENP 495 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 G I + GY SV +F YVF+ +G+TP EYQ+ Sbjct: 496 GLRIYEIVNQVGYVSVKHFSYVFKQLFGVTPGEYQQ 531 >UniRef50_A6Q8S4 Transcriptional regulator, AraC family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8S4_SULNB Length = 284 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 21/229 (9%) Query: 30 NGGDLVFADASQI----RVDKCVENFVFVSRDTLSLFL---------PMLKEEALNLHAH 76 + G+L A+ +I R V +++ S+D L +FL L + L H Sbjct: 61 DDGNLTVAETGEIIFMPRDSYVVSDYLKNSQD-LEVFLLFFDHEIALSFLGNKPLKHHTD 119 Query: 77 KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH-FIPLL 135 ++V +L S++I F E Q N L + L F L V E+EH FI L Sbjct: 120 ERVCTL---KSSKNINYFIETLQKMTFTNKSDKAFLTLKILEFLHL-VVQENEHKFIDTL 175 Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECR 194 Q + + +++ + T++ AS MS S K +++ T+ Q L E + Sbjct: 176 YASEQYKQKRNISSLMLEHFEKNLTVSDFASLSGMSLSTFNKAFKKQLGTTPKQWLIEKK 235 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 M RA L+ G S+ +VA GY +VS FI ++++YG TP Q+ + Sbjct: 236 MNRAHALLS-QGKSVTQVAFDVGYLNVSNFIKAYKSFYGQTPKSMQKNT 283 >UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4P0_BREBN Length = 515 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%) Query: 77 KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL 136 K+V +L V + + V +E++QL++ ++ Y+ LR +AL++ LL V ++ Sbjct: 89 KEVEALAVSTPASFLTVLEELSQLTRKRD--YSSFLRSQALLYELLGVVYDE-------- 138 Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL--------KKKLREEETSYSQ 188 Q + I IA+ R + EL PSL + R + + Sbjct: 139 ---QKKKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMTPGE 195 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRL 247 LT RM+ A +L+ G S+K VA + GY YF +F+ G++P Y ++S QR+ Sbjct: 196 YLTGLRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQRV 254 >UniRef50_Q7MJE3 AraC-type DNA-binding domain-containing protein n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MJE3_VIBVY Length = 243 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 52/94 (55%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHG 206 + +IN++I +W I S L +S S L + L+ E + ++ R+ + +L+V Sbjct: 143 IVEIINSDIKKKWNYKEICSLLFVSHSTLYRTLKNEGKTLKMIVLHIRIINSQKLLVNTN 202 Query: 207 FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 SI ++ CG++S SYF F++ M+PTEY+ Sbjct: 203 MSINEISNRCGFNSPSYFSRKFKDSVKMSPTEYR 236 >UniRef50_B4X108 Transcriptional regulator, AraC family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X108_9GAMM Length = 336 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 L +A+ + MS L+++L E ++ Y QL+ R +RA QL V G S+ VA G+ Sbjct: 254 LGELAAAVAMSERSLRRRLSELDSGYRQLVDAWRAERAGQL-VRSGDSLAEVAHRLGFSD 312 Query: 221 VSYFIYVFRNYYGMTPTEYQERSA 244 S F FR +YGM+P Y+++ Sbjct: 313 ASNFSKAFRRWYGMSPDSYRQQDG 336 >UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8T9_HAHCH Length = 278 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 52/96 (54%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 +++ +V +I +W+ IA L +S + L++KL +E ++S++L + RM AL L Sbjct: 170 DIQRKVRLLIGAEPDKKWSSQDIAESLALSEATLRRKLAKEGNAFSEILVDVRMSLALSL 229 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + +I +A GY S S F F+ +G +PT Sbjct: 230 LQSTDAAIASIAYQVGYESASRFSVRFKQRFGFSPT 265 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Query: 137 NVLQPNMRTRVCTV------INNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQL 189 NV T + TV I +N + +L ++ ++ +SP K +EE T++ Sbjct: 418 NVENKKKVTSISTVEKAKLYIRDNYQKDLSLEEVSRQVDISPYYFSKVFKEETGTNFIDY 477 Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 LTE RM A QL++ S+K + + GY +YF F+ G+TPTEY+E Sbjct: 478 LTELRMSVAKQLLLESERSMKEIGIMVGYSDPNYFSRSFKKNIGITPTEYKE 529 >UniRef50_C0D596 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0D596_9CLOT Length = 429 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 2/108 (1%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECR 194 L+ P +R R T I ++A TL +IA + +SPS L + RE S S + R Sbjct: 321 LDQYSPLVR-RAVTYIRLHLAEPLTLKQIAEGIRVSPSYLSRTFNREIGESVSNYIAGAR 379 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +++A +L+ G ++ +A G+ +++YF FR + G TPT+Y+ R Sbjct: 380 VEKAAELLKFTGLPVQNIASYVGFANLNYFSRCFRLHKGTTPTQYRNR 427 >UniRef50_B4WXJ1 Transcriptional regulator, AraC family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXJ1_9GAMM Length = 331 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 47/81 (58%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 +L +A +L MSP L +KL++E T + QL + +RA QL+ + +++ VA GY Sbjct: 249 SLDTVADQLHMSPRTLIRKLKQENTRFQQLRDQTLSRRAAQLLGLPHYTVAAVAEDLGYT 308 Query: 220 SVSYFIYVFRNYYGMTPTEYQ 240 V+ F F+ ++G TP ++ Sbjct: 309 DVASFRRAFQRWFGTTPGSFR 329 >UniRef50_A9U6D3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6D3_PHYPA Length = 514 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVI 204 R+C I +++ + +L R+A +PS L + ++E+ + S + +CR+++A +++ Sbjct: 413 RICQYIEEHLSEDLSLVRLAEIHYFNPSYLSRFFKQEKGINLSDFIDKCRVKKAKEMLRD 472 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + ++ V +S GY + F F+ G+TP EY++ Sbjct: 473 NDLKVREVGLSVGYEAAHSFTRFFKKAAGLTPQEYRD 509 >UniRef50_C4T4E3 AraC-type DNA-binding domain-containing protein n=3 Tax=Yersinia RepID=C4T4E3_YERIN Length = 269 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%) Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 + L + A + LL+++L + + LL + +V V+ + A W+++ +A L Sbjct: 135 DALLQHAAMGVLLALYLAGQAGV--LLIDRRDKWAEQVQQVLLLDPARNWSVSDVARSLH 192 Query: 170 MSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 + S L++KL +E+ S+ +L E RM AL + SI +A GY S S F F+ Sbjct: 193 IGDSTLRRKLMQEDRSFRMILEEVRMGCALHALQTTSLSIGEIAAQHGYISPSRFTSRFQ 252 Query: 230 NYYGMTPTEYQE 241 ++G+TP +E Sbjct: 253 QHFGLTPRRLRE 264 >UniRef50_C6D226 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D226_PAESJ Length = 537 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQR 197 ++ ++ R+ I NI + TL +A + + P + ++E + ++S + RM+R Sbjct: 433 IRSDLMERIRRFIQENIK-DITLQTVADHVNLHPVYVSNLFKQETKENFSNYVLRLRMER 491 Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 A+QL+ I ++A+ GY YFI +F+ YGMTP E++ Sbjct: 492 AVQLLKNKDLRISQIALEVGYQKPQYFIKLFKTQYGMTPQEFK 534 >UniRef50_D0SJB7 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SJB7_ACIJU Length = 351 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 49/84 (58%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 TL IA L MS LK+ L+ + T++ Q++ + R A +++ +SI+ +A GY Sbjct: 266 TLPMIAERLNMSERTLKRHLQAQGTTFLQIVADVRFTEAKKMLQHKQYSIQDIASIVGYE 325 Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243 + FI F+ +G TP++Y++RS Sbjct: 326 EATNFIRAFKKTFGETPSQYRKRS 349 >UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK40_BACSK Length = 407 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQ 200 + RV + + + +L +A L ++ + L K+ +EE +S + RM RA++ Sbjct: 306 QLAVRVYEYVEAHFFEQPSLQEVADHLFLNAAYLSKRFKEETGEKFSDYIHRLRMDRAVE 365 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 L+ + ++A GY SYFI VF+ + MTP E++ R Sbjct: 366 LLAETNMKVSQIAKKLGYKDASYFIKVFKREFHMTPQEFRSR 407 >UniRef50_C0ZD41 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZD41_BREBN Length = 341 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 135 LLNVLQPNMRTRVCTVINNNIAHE--WTLAR-----------IASELLMSPSLLKKKLRE 181 LL +L P + + ++++A + W L R +ASEL MS L+++L + Sbjct: 208 LLEILTPVLDRSLDEQGSHSVAEKVKWILKRSLTGGRLDIQAVASELGMSDRTLQRRLAD 267 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 E T++ QLLT+ R ++A + + IK VA GY + F FR + G TP+ ++ Sbjct: 268 ESTTFKQLLTQARHEQAREYLADPKLDIKEVAFLLGYEDQNSFYRAFRLWEGDTPSNWR 326 >UniRef50_B6EKX1 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EKX1_ALISL Length = 259 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 13/221 (5%) Query: 24 GEYRY--FNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP---MLKEEALNLHAHKK 78 G Y+Y NG ++ S++ + N +F S+ + P K+ N K Sbjct: 38 GRYKYNLKNGDAILLGANSKLNFENIPINGLFFSKQIIFFKPPKVEFFKQTVKNFEVSKY 97 Query: 79 VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138 + L + + + + + +N N R+ + L + L +E+++ +L Sbjct: 98 RNIKLDYQLKMTLDLLHQSDVILKNINTRH--------MWLDGLYLLLAEEYYLQVLFLS 149 Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 + + +V V+ + + + S L +S + L ++L++ T + +++ + RM +A Sbjct: 150 SEGSFNEKVYEVLEKMQPSDHKIENVCSILGVSKATLIRRLKKAGTQFKKIVRQVRMNKA 209 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 L L+ ++ ++ SCGY SV + F+ +G+TP EY Sbjct: 210 LFLMQKRELLLEDISFSCGYQSVELLVVYFKEEFGITPKEY 250 >UniRef50_A4XTI6 Transcriptional regulator, AraC family n=6 Tax=Pseudomonas aeruginosa group RepID=A4XTI6_PSEMY Length = 360 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%) Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 + ++AS L +S L+++L EE +S+ L E R A +L+ G S++ +A GY Sbjct: 278 MEQVASRLHLSSRTLRRRLIEEGSSFRALQDEVREALADELLAAGGLSLEEIAERLGYGE 337 Query: 221 VSYFIYVFRNYYGMTPTEYQ 240 +S FI+ F+ + G TP YQ Sbjct: 338 LSNFIHAFKRWKGTTPGRYQ 357 >UniRef50_UPI0001788F96 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F96 Length = 525 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQLIVIH 205 V I ++ T+ IA SPS + ++E+ S +++LL + RM++A +L+ Sbjct: 427 VIHTIRERMSENITIKDIAQHFSFSPSHIGFLIKEKSGSTFNELLVQLRMEKAQELLKQP 486 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 G I VA GY + YF F+ YGMTP E+++R Sbjct: 487 GLKIYEVADQVGYRYLPYFSRQFKERYGMTPLEFRKR 523 >UniRef50_A9U8F0 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U8F0_PHYPA Length = 244 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A EL MS L+++L EE TS+ LLT+ R ++A + + IK VA GY + Sbjct: 69 VARELGMSDRTLQRRLTEENTSFKHLLTQARHEQAREYLADPSLDIKEVAFLVGYEDQNS 128 Query: 224 FIYVFRNYYGMTPTEYQ 240 F FR + G TP+ ++ Sbjct: 129 FYRAFRLWEGNTPSHWR 145 >UniRef50_A5F2L6 Transcriptional regulator, AraC/XylS family n=33 Tax=Vibrionaceae RepID=A5F2L6_VIBC3 Length = 262 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS 185 L DE + LL +MR R+ ++ N E + +++ MS + L + L E T Sbjct: 140 LRDEKALHLLFPSDNASMRERLARYLSVNPGDEHNIETVSAHFAMSRATLARHLAAEGTG 199 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + ++L+E RM AL L+ + VAV+CGY S++ F F+ Y +TP +Y Sbjct: 200 FREVLSEVRMNYALALLQ-ELRPLMEVAVACGYQSLTRFSARFKQQYRLTPYQY 252 >UniRef50_C9NX62 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NX62_9VIBR Length = 234 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%) Query: 91 IPVFQEVAQLSQN-KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149 +PVF E+ + Q + A MLR F D+ + LLN L N +V Sbjct: 84 VPVFDELVNVIQQLHKVNKAVMLR-----FVFTYCLEMDKPYFSNLLN-LYANSNDKVFD 137 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFS 208 +N ++ +WT++R A +L M + L + S LTE R+ A Q+I+ Sbjct: 138 FVNKHLYEQWTVSRYAEKLGMEVTKLNTAFYKYYGQSTKTWLTEQRLNYAKQVILETDRK 197 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 I VA G+ S S+FI F+ Y +P+E++ S Sbjct: 198 IADVAFDAGFSSHSHFIGAFKKRYQCSPSEFRAGS 232 >UniRef50_Q3JI70 AraC family regulatory protein n=28 Tax=pseudomallei group RepID=Q3JI70_BURP1 Length = 205 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 55/106 (51%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRM 195 LN+ P + RV + + +LAR+AS+L +S LK++L+ TSY +L R Sbjct: 98 LNLDGPALADRVRAELTLTESGYPSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARY 157 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + A +L+ + V+ GY + S F FR + G+ P+ Y++ Sbjct: 158 RDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRD 203 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIH 205 +C I N T IAS +S + L + R++ + + +T R+ RA ++ + Sbjct: 204 ICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLKKY 263 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 F + VA+ CG+ V+YF VF+N G TPT+Y+ Sbjct: 264 NFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_C1ABV7 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABV7_GEMAT Length = 322 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 12/171 (7%) Query: 87 CSRDIPVFQE----------VAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL 136 C++D P++ ++ + ++ +R A + ++F L + + PL L Sbjct: 150 CTQDGPLYSSGGVTAGIDLALSIIEKDLGVRTAAATARELVVF-LRRTGTQAQFSEPLRL 208 Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRM 195 + + VC N+ + ++ +A+ MSP ++ R + + + R+ Sbjct: 209 QAMNDDGLQEVCLWATNHPDADLSVEALATRANMSPRQFARRFRSAMGITPGRFVVTLRL 268 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 RA + SIKRVA G+ SV F F G++P+EYQ+R A R Sbjct: 269 DRARTALAGGRVSIKRVASGAGFQSVDGFRRAFERELGVSPSEYQQRFANR 319 >UniRef50_A9MGM0 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MGM0_SALAR Length = 296 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 53/93 (56%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 +V ++I ++ + W +A ++ MS S KKK+ ++ S S +T+ +M AL+ + Sbjct: 187 KVASLIMSDYSKNWQSKDLAMQMNMSVSTFKKKMYKDTGSVSSYITKIKMIEALRQLRRT 246 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 I +A+S GY S SYF VF+ ++ + P+E Sbjct: 247 NRPINSIAISLGYTSSSYFTSVFKKHFKIFPSE 279 >UniRef50_A9GN71 Tra n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GN71_SORC5 Length = 329 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 2/105 (1%) Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197 L P + R ++ + A W +A L +S + L+++L + S+ LL + R+ Sbjct: 209 ALDPTLAVRA--LVRRDPARPWAAPEVARALGVSDATLRRRLGAKGVSFRALLWKERLDL 266 Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 A L+ + VA +CGY S S F FR G++P+EY+ R Sbjct: 267 AKGLLRSGRHGVLEVATACGYDSASRFAEQFRRSEGVSPSEYRAR 311 >UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=Opitutaceae RepID=B1ZXD9_OPITP Length = 430 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%) Query: 130 HFIPLLLNVLQPNMR-------TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 + LL++ +Q N R R + ++A E T +A +SPS +R++ Sbjct: 302 EMLELLIDAIQANRRHPNSVQLARAIEYMEEHLAGELTREEVARAAGLSPSHFSHLMRDK 361 Query: 183 ET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S+++LLT R+ RA L+ + ++A SCG+ SYF VFR TP E++ Sbjct: 362 TGRSFTELLTRLRVDRACHLLARTETELAQIAQSCGFGDQSYFTRVFRRATQQTPGEFR 420 >UniRef50_B7ASF8 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ASF8_9BACE Length = 281 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 13/158 (8%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE-------DEHFIPLLLNVLQPNMRT 145 +++E+ Q NKN Y++++ + +++ L E DEH L +N ++T Sbjct: 124 MYEEMLQ-EYNKNTSYSQLIL-QGMVYKLFFYMYENHIPSEEDEH--TLYINKFDERIQT 179 Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVI 204 +C I +N+ ++ +A+ + +SPS + + +SY+ +T+ R+Q L+ Sbjct: 180 SLC-YIEDNLMDGSSIEDVAAYVSLSPSHFSRLFKNVTGSSYTDYITDVRLQHTQILLGT 238 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 SI +A G + +Y +F+ YG+TPT+Y++ Sbjct: 239 TDLSINDIAAKVGVSNGNYISTLFKKRYGITPTDYRKE 276 >UniRef50_Q48HQ8 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas syringae group RepID=Q48HQ8_PSE14 Length = 315 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%) Query: 111 MLRKRAL-IFALLSVFLED-EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 +LR +A + L+ ++D HF L R ++ + +WT+ +A + Sbjct: 164 LLRGKAYEMLGQLTAHIQDLAHFTGLNAGGRDLMRVERARKLLEAHPEQDWTIESLAQSV 223 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 ++ LK+ R+ ++ L + R++RA QL+ G ++ VA + GY S S+F V Sbjct: 224 ELNTKKLKQGFRQSYDSGVYGYLQKVRIERAAQLLRQQG-AVSEVAAAVGYSSASHFAKV 282 Query: 228 FRNYYGMTPTEYQERSAQRL 247 FR YYG+ P + +A+ L Sbjct: 283 FRRYYGINPLHFSAMAAENL 302 >UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=C9XN35_CLODC Length = 312 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 29/253 (11%) Query: 12 YARHKY--ILTMVNGEYRYFNGG--------DLVFADASQIRVDKCVENFVFVSRDTLSL 61 Y H + I+ +NG YF G D++F ++I +++ VF R + + Sbjct: 50 YHNHDFNKIIIFINGNVTYFVDGIPYKLKPWDILFISNNEIH-KPVIDSNVFYERIAIWI 108 Query: 62 FLPMLK---------EEALNLHAHKKVSSLLVH-HCSRDIPVFQEVAQLSQNKNLRYAEM 111 +K E+ + K + L ++ H I F E +S++ N + Sbjct: 109 SPEFMKKNSDATSDLEKCFKIATENKCNRLRLNIHDIESIKSFIEQINISES-NTEFGNE 167 Query: 112 LRKRALIFALL----SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 + + AL L+ +FL++E+ + +V +V IN+NI + ++ I+SE Sbjct: 168 ILRNALFIQLMIFLNRIFLKNEN-MESTEDVFYDETIKKVLNYINSNIDDKLSIDSISSE 226 Query: 168 LLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 +S L +K + TS + + R+ A LI +G+ + V CG++ S F+ Sbjct: 227 FFISKYYLMRKFKSHTGTSIHNYIVQKRLILAKSLIT-NGYLMSEVCNKCGFNDYSSFVR 285 Query: 227 VFRNYYGMTPTEY 239 F+ YG++P Y Sbjct: 286 AFKKNYGVSPKNY 298 >UniRef50_UPI0001B4CF35 putative AraC family regulatory protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CF35 Length = 357 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%) Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 L +A+ L +SP+ L+++L EE+TS+ +L + R A+ + G I+ +AV G+ Sbjct: 270 LREVAARLAVSPATLRRRLDEEDTSFQRLKDQVRRDAAIGSLRETGEPIEELAVRLGFSE 329 Query: 221 VSYFIYVFRNYYGMTPTEYQ 240 + F FR + GMTP Y+ Sbjct: 330 AAAFHRAFRRWTGMTPGAYR 349 >UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q391T4_BURS3 Length = 288 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 2/124 (1%) Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L+ L+ +E PL L Q RVC I N A + TL A E+ S L Sbjct: 159 LVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSRTLA 218 Query: 177 KKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + E S+SQ + R+ A L+ G S+ VA GY + S F VFR + GMT Sbjct: 219 RLFTAETGLSFSQWRQQARISAARPLLA-SGRSVIAVAAELGYETTSAFSTVFRRFAGMT 277 Query: 236 PTEY 239 P+ Y Sbjct: 278 PSAY 281 >UniRef50_C7MT39 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MT39_SACVD Length = 321 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A+EL M+ L+++L E TSY L+ E R A +L+ S+++VA GY + Sbjct: 232 VAAELAMTARTLRRRLAAEGTSYRALVDEVRQTLAEELLATRSLSVEQVAYRLGYGDAAS 291 Query: 224 FIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 F+ F + G+ P Y + R RD A Sbjct: 292 FVRAFTRWKGVPPGRYAR--SGRPGRRDPA 319 >UniRef50_A4Y0S8 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0S8_PSEMY Length = 342 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 129 EHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREEETSYS 187 +H LL + ++ RV ++ +AH E A++A L +S L+++L EE +Y Sbjct: 223 QHAEALLARLPSASLSARVIGLLGEQLAHGEPDRAQLARALHLSERTLQRRLAEEGCNYQ 282 Query: 188 QLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 QLL + R Q A + + +A+ GY S F FR + G+ P EY+ + A Sbjct: 283 QLLADTRRQLAERYLREGRLPAAEIALLLGYSEPSVFFRAFRQWTGLPPGEYRAQQA 339 >UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89NH4_BRAJA Length = 355 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 3/98 (3%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFS- 208 ++NN + ++A +A EL ++P L++ + ++S LTE R++RA +++ F+ Sbjct: 257 IVNNCWQQDISVANVAQELGVTPRYLQRLFEADGKTFSSFLTEQRLKRAHRMLREPDFAE 316 Query: 209 --IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + +A G+ +SYF FR YG TP++ + A Sbjct: 317 RPVSSIAYDVGFGDLSYFNRCFRRAYGATPSDVRSGEA 354 >UniRef50_B2HZ04 AraC-type DNA-binding domain-containing protein n=17 Tax=Acinetobacter RepID=B2HZ04_ACIBC Length = 341 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 55/96 (57%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 RV +++N+ H ++ +A L MS LK++L E TS+S L+ E R + A L+ Sbjct: 242 RVRDILSNSEQHYLSIENVAEYLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHATSLLSRT 301 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +S++++A GY V+ F F+ + G +P+ +++ Sbjct: 302 DYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRK 337 >UniRef50_B3CG99 Sensor protein n=4 Tax=Bacteroides RepID=B3CG99_9BACE Length = 1396 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 138 VLQPNMR--TRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 V P+ R RV VIN N+++ T+ I++E+ +S L +KL+ + QL+ Sbjct: 1276 VKSPDDRLMERVMRVINENLSNPALTVEMISTEVGISRVHLHRKLKGLTNQTTQQLIRNL 1335 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDS 252 R+++A L+ +I VA G+ +YF FR YGM+P+EY ER + +D Sbjct: 1336 RLKQAASLLAGKRHNITEVATLTGFAHPTYFATAFREMYGMSPSEYMERHIGQDKTKDG 1394 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 160 TLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 +L IA +L ++P+ L + E ++S LT CR+++A +L+ I VA + GY Sbjct: 280 SLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAKELLKDVKVKIYEVAEAVGY 339 Query: 219 HSVSYFIYVFRNYYGMTPTEYQER 242 YF VF+N G TP EY+E+ Sbjct: 340 TDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_B5JY44 Transcriptional regulator, AraC family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY44_9GAMM Length = 337 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 142 NMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 ++ V I + I + +++ IA EL M+ L+++L+EE TSY+QL R + A + Sbjct: 233 SLAAEVVQAIESKIGYAVFSMQDIAGELNMTQRTLQRRLKEEGTSYAQLRDSVRFRFAEE 292 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + + +A + G+ + F F+ + GM+P EY++R Sbjct: 293 YLRDSSMDMATIAANLGFSEPANFYAAFKRWQGMSPGEYRKR 334 >UniRef50_B1MLH4 Probable transcriptional regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MLH4_MYCA9 Length = 269 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE--EETSYSQLLTECRMQRALQ 200 M+ RV I + + + +L+ +A MS S +K E T Y Q + + RM RA Q Sbjct: 168 MQARVTEYIEDGLDADISLSALAGHAQMSTSEFRKAFTEVFGHTPY-QFVLDRRMSRAKQ 226 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 L+ S+ ++V+ G+ S S+F F+ G+TPT Y+ Sbjct: 227 LLATTDLSVTDISVAVGFSSPSHFATTFKTRIGVTPTAYR 266 >UniRef50_D1NAP2 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAP2_9BACT Length = 283 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 129 EHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSY 186 E+F P + + N +V +I NI + ++ L +A +L + P+ L E E+ Sbjct: 167 EYFTPFEMGRKEKNAE-KVRILIEQNIWNPDFNLPMLARQLNLHPNHLNAVFTEVEKIPI 225 Query: 187 SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + L R+QRA Q++ G K+VA +CG+ S+SYF +FR +G +P +YQ + Sbjct: 226 GEYLIRRRLQRAGQMLAA-GHRCKQVADACGFRSLSYFSRLFRQRFGCSPRQYQAKET 282 >UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae RepID=B4SQ42_STRM5 Length = 293 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 27/156 (17%) Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL----------------- 169 E +H I +LL+ ++ R R ++ + H+ L +IAS+LL Sbjct: 143 ERQHIIDVLLDEIRTAPRQR----MHLPMPHDRRLLKIASQLLADPSDERSLAEWAHWAG 198 Query: 170 MSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 +SP L + R+E T S++Q + R+ AL+ + G S+ +A + G+ S S F+ VF Sbjct: 199 LSPRSLTRHFRDETTLSFAQWRQQARLSEALRQLT-DGRSVADIAHALGFSSASAFVTVF 257 Query: 229 RNYYGMTPTEYQERSAQRL-SNRDSA---ASIVAQG 260 R ++G+ P Y R+ L + D A AS A G Sbjct: 258 RRHFGLPPGRYLARAGHGLETGLDPARGLASPAASG 293 >UniRef50_C6D789 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D789_PAESJ Length = 547 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVI 204 ++C IN ++ + +L R+A +PS L + + E + S+ + CR++RA +L+ Sbjct: 446 KICHYINEHLNEDLSLVRLAEINYFNPSYLSRFFKLECGVNLSEYIDNCRVRRAKELLKE 505 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 ++ VAV GY + F F+ GMTP EY++ Q Sbjct: 506 DELKVREVAVEVGYEAAHSFTRFFKKATGMTPQEYRDALTQ 546 >UniRef50_C0FZV1 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZV1_9FIRM Length = 524 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 160 TLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 T + I+ E +SP+ L K R+E +S S + RM RA QL++ +SI +A GY Sbjct: 440 TRSEISEEFYLSPNYLSKLFRKETGSSLSVYIQNVRMSRAKQLLLETNYSISEIATETGY 499 Query: 219 HSVSYFIYVFRNYYGMTPTEYQE 241 S ++F F+ + G TP EY++ Sbjct: 500 PSFAHFSKQFKKFVGKTPNEYRK 522 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYS-QLLTECRMQRALQ 200 N +V I+ N A +L +A MSP+ ++E + E R+Q+A Q Sbjct: 186 NKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQ 245 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ + +VA+S G+ + SYFI FR Y +TPTEY+ Sbjct: 246 ILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGF 207 T + N + ++ +A +L ++ S R++ S Q LT+ RM RA QL+ HG+ Sbjct: 160 TYLEANYMRDVSIGELAGKLNLNRSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGY 219 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 S + A+S GY + F +F+ ++G+ P EY R ++ Sbjct: 220 SPGKAALSTGYPDIFSFSRMFKKHFGVFPREYSRRQTEK 258 >UniRef50_B9LZS6 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZS6_GEOSF Length = 324 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 52/95 (54%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHG 206 V ++ ++ H+WTL +A L MS +++KL++E ++ +LL R++ A ++ Sbjct: 223 VEAIVKQDLNHKWTLKSVAQSLNMSERSMQRKLQDEGQTFRKLLNNARIRTAESYLLNSQ 282 Query: 207 FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 S+ + G+ S+F F+ Y G P++Y++ Sbjct: 283 LSLTEIGYLTGFSDYSHFSKEFKRYSGTNPSQYRK 317 >UniRef50_A3WY00 Transcriptional regulator, AraC family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY00_9BRAD Length = 345 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHG 206 V +I N++ RIA L MS L+++L+EE TS+ QL E + Q A++ I Sbjct: 244 VRGLILANLSMPIEFKRIAKYLNMSERSLRRRLQEEGTSFRQLADELKAQIAIKYIRDTD 303 Query: 207 FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 S++ +A + G+ + F + FR + TP +Y++ +R Sbjct: 304 LSVEEIAFALGFGDAASFRHAFRRWTNATPQDYRKSGIRR 343 >UniRef50_A7K218 Transcriptional regulator AraC/XylS family n=5 Tax=Vibrio RepID=A7K218_VIBSE Length = 259 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 44/76 (57%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A MS + L +KL++E T Y ++L E R+ AL L+ +++ +A CGY S Sbjct: 178 VAERFAMSRATLIRKLKQEGTQYREVLAEVRLNHALYLMQNGSYNVALLAQLCGYQSEGR 237 Query: 224 FIYVFRNYYGMTPTEY 239 F F+ +G+TP+EY Sbjct: 238 FSQRFKGKFGLTPSEY 253 >UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK6_BACP2 Length = 352 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 7/92 (7%) Query: 160 TLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 T+ +A E +SPS L K + R+ S+ ++ E R+++A ++I I +A + GY Sbjct: 266 TIQEMAEEFNLSPSYLSKYIARKLGKSFREIRQEIRLEKACEMITSSNLQINDIATAVGY 325 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 +V +FI +F+ Y +TP +Y RL+NR Sbjct: 326 QNVEHFIRLFKKKYHLTPHQY------RLNNR 351 >UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY2_9CLOT Length = 252 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRA 198 +P + RV +++ I+H+ T +IA + ++P L ++E + S+ + R+ A Sbjct: 144 EPGVVHRVKEIVSQFISHDLTREQIAELVHLAPDYLSHLFKKETGVTLSEYIASQRLTMA 203 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 L+ + +A GY VSYF VF+ YGMTP EY+ RS ++ Sbjct: 204 KYLLAQTSLPVSSIADKVGYSYVSYFNRVFKKAYGMTPVEYR-RSEKK 250 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQLIVI 204 +V IN N + L IA + M+PS L + ++ + LTE R+ A +L++ Sbjct: 194 KVHLFINKNYQNNIALEDIACNVGMNPSALCRYYKKHTGKRMFEYLTELRISYATKLLIN 253 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +I +VA CGY+S+S+F + F+ G TP+EY ++ Sbjct: 254 KNINISQVAYDCGYNSLSHFNHQFKQVTGYTPSEYAQK 291 >UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=Fusobacterium RepID=C3WDI9_FUSMR Length = 269 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209 I N + ++ IA EL +S L +K +EE E ++ ++L + R+Q+A++L+V + Sbjct: 168 IQNRYNEKISIIEIADELGVSSGYLSRKFKEELEETFLEILNKYRVQKAMKLLVKEDLKM 227 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 ++ G+ +F VF+ Y GM P E+ ++ Sbjct: 228 YEISEKVGFSDYKHFCTVFKKYLGMAPGEFIKKDV 262 >UniRef50_C9Y4B2 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y4B2_CROTZ Length = 312 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Query: 128 DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYS 187 +E+ P +L +L + + N H WTL +A+ +S S + Sbjct: 193 EENAAPGMLPLLADKRLAPAVSAVLANPEHPWTLESMAARCFLSRSTFARHFASRYPLTP 252 Query: 188 Q-LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 Q L + RM RA +L+ +I RVA +CGY + + F F++ +G+TP +++++ A+ Sbjct: 253 QGWLNQVRMARAARLLEREQRAIGRVAEACGYLTQAAFSKAFKSAWGVTPGQFRQQHAR 311 >UniRef50_C6Y0D7 Sensor protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y0D7_PEDHD Length = 1363 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 7/141 (4%) Query: 106 LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHE-WTLA 162 +R +L+ R+ L+ F +D +P L P+ R V+ NI E + + Sbjct: 1220 VRVDNLLKTRS---NLIRKFKKDAILVPKELTATSPDEVFLGRAIAVVEQNIGTEDFNAS 1276 Query: 163 RIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 SE+ MS +++ KL+ + S + R+++A QLI+ +I +A G++ + Sbjct: 1277 MFISEMNMSRTVIYTKLKVLTGQNISTFIRTIRLKKAGQLIIQTSMNISEIAYEVGFNDL 1336 Query: 222 SYFIYVFRNYYGMTPTEYQER 242 YF F++++ +TP+EY+ + Sbjct: 1337 KYFRECFKDFFKLTPSEYKRK 1357 >UniRef50_A0KMW4 Transcriptional regulator, AraC/XylS family n=2 Tax=Aeromonas RepID=A0KMW4_AERHH Length = 270 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 TL +A MS + + +KL E S+ QLLT+ RM AL L+ G A++CGY Sbjct: 173 TLEGVAPHFAMSRASMARKLAAEGRSFRQLLTQVRMSHALTLLQ-QGLVPLETALACGYD 231 Query: 220 SVSYFIYVFRNYYGMTPTEY 239 S S F F+ +G+TP +Y Sbjct: 232 SPSRFAARFKQEFGLTPYQY 251 >UniRef50_C9NYZ8 Transcriptional regulator AraC/XylS family n=8 Tax=Vibrio RepID=C9NYZ8_9VIBR Length = 261 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 49/85 (57%) Query: 156 AHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVS 215 A E +L +A MS + L +KL++E + Y QLL + R+ ALQL+ H + ++A Sbjct: 170 ADEHSLEGVADHFGMSRATLIRKLKQEGSQYRQLLAQVRLSHALQLMQKHQYDGYQLAQM 229 Query: 216 CGYHSVSYFIYVFRNYYGMTPTEYQ 240 CGY S F FR +G+TP EYQ Sbjct: 230 CGYQSEERFRQRFRERFGVTPREYQ 254 >UniRef50_Q481H7 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481H7_COLP3 Length = 344 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 50/88 (56%) Query: 154 NIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 N+ + +AS+L ++P L++KL E+ TS+ ++ E R A +LI+ +I+ + Sbjct: 255 NMHKDLCAENLASDLYLTPRTLRRKLSEQGTSFRDIVKELRCSAAKKLIIETQLTIEDIG 314 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + G++ VS F F+ + G TP+ ++ Sbjct: 315 CAIGFNDVSNFRAAFKKWTGQTPSNLRQ 342 >UniRef50_Q1YPA3 Transcriptional regulator, AraC family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPA3_9GAMM Length = 322 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 48/82 (58%) Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 ++A+EL +S L ++L+E TSY ++ R + A+Q +V S++RVA G+ Sbjct: 241 QMAAELGISSQTLHRRLKESATSYQKIKDNLRREVAIQKLVSERLSVERVAEIVGFTESR 300 Query: 223 YFIYVFRNYYGMTPTEYQERSA 244 F F+++ G+TP EY +R A Sbjct: 301 SFTRAFKHWTGLTPREYCKREA 322 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET- 184 L D H + LL+N L+ ++IA + L + S L+ + +++ Sbjct: 172 LADAHQLDLLMNALR------------DSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGM 219 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S SQ L + R+ RA++L+ +I VA CG+ +YF VF +G+TP+ Y++R Sbjct: 220 SVSQYLRQLRLCRAMELLRYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQ 279 Query: 245 QRLSNRDSAASIVAQGN 261 R S +A S V GN Sbjct: 280 TR-SVAGTACSDVDIGN 295 >UniRef50_Q1YRD2 Putative transcriptional regulator (AraC family) n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRD2_9GAMM Length = 337 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 3/105 (2%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202 +RT++ ++ + E TL ++A +L ++P L+ +L ETS+ +LL E R A +L+ Sbjct: 234 VRTQIAALLESA---EVTLEKVAEQLEITPRNLRHQLNSAETSFQRLLNEHRRSLAKRLL 290 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRL 247 I + G+ S F F+ + G TP EY++R+ RL Sbjct: 291 SQTDEEISEIVYLTGFSEPSTFYRAFKRWEGTTPIEYRKRAKARL 335 >UniRef50_B8KKU1 Transcriptional regulator OruR n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KKU1_9GAMM Length = 348 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 50/95 (52%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 +V ++ N H ++ A +L MS L+++L EE T+Y +++ + RM+ A + Sbjct: 243 QVRRLLANAPGHHPSIEDAAGKLAMSERSLRRRLSEEGTTYKEVVLDFRMELASSYLRGR 302 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +I+ VA GY S F F YYG TP E++ Sbjct: 303 EMTIQEVAFLAGYADASNFHRTFSRYYGATPGEFR 337 >UniRef50_C6J1B0 Transcriptional regulator n=2 Tax=Firmicutes RepID=C6J1B0_9BACL Length = 272 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%) Query: 115 RALIFALL-SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 R L LL S F ED +P N++ ++ I+NN AH WT++ +A L +SP Sbjct: 131 RTLFNKLLESYFRED--IVPQHYNLI------KLRAAIHNNPAHPWTVSEMAEILSISPG 182 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L+ ++ S + +CR++ A + ++ +++ +A CGY +V +F F+ Sbjct: 183 YLQVIYKKTFGLSCMDDVIQCRIRLAKEYLIHSHYTVAEIAYRCGYRNVEHFCRQFKQMT 242 Query: 233 GMTPTEYQERSAQRLSNRDSAAS 255 G +P +Y + + NRD+ + Sbjct: 243 GTSPRKYPKLNTGPDINRDNDKT 265 >UniRef50_A4Z0B3 Putative Transcriptional regulator, AraC/XylS family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z0B3_BRASO Length = 319 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 147 VCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 V ++N A +++ ++A+ +S + L E S+S L E R++RA+ L+ Sbjct: 223 VLAILNERFAEPDFSAQKLATAAGLSERYVNDLLYEAGASFSARLNELRLRRAMDLLADG 282 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + +A +CG++ +SYF FR +G+TPT + R Sbjct: 283 ERRVSDIAFACGFNDLSYFNRCFRRRFGLTPTAARGR 319 >UniRef50_B6RAA0 Transcriptional regulator, AraC family n=4 Tax=Alphaproteobacteria RepID=B6RAA0_9RHOB Length = 263 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Query: 136 LNVLQP---NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTE 192 +N+ +P N ++V ++I ++++ W +AS MS + ++ L + ++++L Sbjct: 152 VNLSKPDTDNPLSKVRSLIETDLSYAWRATDVASHFAMSEATFRRWLAKSGHGFAKVLLH 211 Query: 193 CRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 R+++ L L+ I +A+ CG+++ S+F F+ +G+ P E + R Sbjct: 212 TRLEKGLTLLQSTHEPISNIALDCGFNTPSHFSEAFKKRFGIRPKEIRVREG 263 >UniRef50_A0P4C5 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P4C5_9RHOB Length = 349 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSY 186 ED F+ LL ++QP + R N+A IA +S L+++L+ +SY Sbjct: 236 EDWEFVTLLRKMVQPYLADR-----RTNVAF------IAEMAGISKRTLQRRLKLCGSSY 284 Query: 187 SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S LL E R + A Q + + VA+ GY S +F FR + G+TPT+Y+ Sbjct: 285 SGLLQEARFELARQNLENPALKVIDVAMMAGYESPQHFTRAFRRFTGITPTDYR 338 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 6/148 (4%) Query: 103 NKNLRYAEMLRKRAL-IFALLSVFLEDE--HFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 NK Y +++ + + +F +LS + H +P + N M R+C I + AH Sbjct: 152 NKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQN--DGEMIARICEFIKRHQAHPL 209 Query: 160 TLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 +L +I+ MS S R+ S+ + + R+Q A QL+ I R+A+ GY Sbjct: 210 SLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGY 269 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERSAQR 246 +S+F +VF+ G TP+ Y++R R Sbjct: 270 EDLSHFNHVFKKLTGETPSLYRKRMKGR 297 >UniRef50_C1DHF9 Transcription activator in PHB biosynthesis, AraC family n=3 Tax=Azotobacter RepID=C1DHF9_AZOVD Length = 348 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 E T+ IA L +S L++ L++E T Y LL E R ++A + FS++ VA G Sbjct: 246 EPTIEEIAGTLCVSKRTLQRCLKKEGTQYKDLLNETRREQAHLYLCHSHFSLQEVAYLLG 305 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQ-ERSAQRLSNRDSAASIVAQG 260 +H S F ++GMTP +Y+ RS R +R A +VA G Sbjct: 306 FHEHSSFFRACSRWFGMTPGQYRAHRSFFRADSRKGHA-VVAYG 348 >UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D691_9CLOT Length = 253 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPS----LLKKKLREEETSYSQLLTECRMQRALQL 201 R I+ E TLA +A E+ M P+ L KKK SY LT RM++A +L Sbjct: 152 RAMEYIDRYFYQELTLAGVAKEVHMHPNYFGNLFKKKT---GVSYLTYLTSVRMEKAREL 208 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + + V GY+S +F VF+ + MTP EY++R+ Sbjct: 209 LDNPNLKVYEVGQIVGYYSPKHFSKVFKKHTNMTPNEYRDRN 250 >UniRef50_Q397S2 Transcriptional regulator, AraC family n=4 Tax=Burkholderia RepID=Q397S2_BURS3 Length = 322 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYS-QLLTECRMQRALQLIVIHGFS 208 I+ + AH WTLA +A MS S ++ +E E + +T RM A L+ S Sbjct: 208 AIHADPAHPWTLAELAKIAGMSRSGFAQRFKELEGGTAIGYVTRWRMMTAANLLRDGEQS 267 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQ 259 + +A S GY S S F F+ +P +Y+ +S ++RD A ++ AQ Sbjct: 268 VSSIAFSLGYESESAFSTAFKRTMSCSPLQYRRQSTPSEAHRDVAGALSAQ 318 >UniRef50_A0Z5W4 Transcriptional Regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5W4_9GAMM Length = 336 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 44/79 (55%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 I+ +L M+ L++ L+EE TS+ +L E R +A+ ++ SI+ +A GY Sbjct: 254 ISRDLGMASRTLQRHLKEEGTSFKDILKEVRKTQAIDRVLTKSESIESIASDLGYSDQRA 313 Query: 224 FIYVFRNYYGMTPTEYQER 242 F F+N+ G +PT Y+ R Sbjct: 314 FSKAFKNWVGHSPTSYRSR 332 >UniRef50_D1B2G1 Helix-turn-helix, AraC domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2G1_SULD5 Length = 339 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 142 NMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 + RVC +I N+ + +L +A+++ M +++ L++E TS++ L E R + A+ Sbjct: 236 TFKKRVCGLIFLNMGELDVSLESVATKMGMHARTIQQNLKKEGTSFTLCLNEIRQKLAIH 295 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + + GF +A GY +S F+ F+ +YG+TP + E+ Sbjct: 296 YL-LKGFDSGTIATYLGYAELSPFLVAFKKWYGVTPRTWLEQ 336 >UniRef50_B5JUK1 AraC-type DNA-binding domain-containing protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUK1_9GAMM Length = 332 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 45/78 (57%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A +L +SP L+++L+EE TSY +L R AL + +SI +A G+ S Sbjct: 251 VAEQLGLSPQTLRRRLKEEGTSYQELKDLIRRDIALHFLNKPQYSIHEIAQKVGFAEPSA 310 Query: 224 FIYVFRNYYGMTPTEYQE 241 F F+ + G+TP++Y++ Sbjct: 311 FHRAFKKWVGLTPSDYRQ 328 >UniRef50_UPI000178A7C6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7C6 Length = 586 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 3/98 (3%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSY--SQLLTECRMQRALQLI 202 +R+ I ++++ + +L IA + M P + + L + ET + S + +M++A +L+ Sbjct: 482 SRMKRFIRDHLSQDISLQAIADHMYMHPVHVSR-LFKMETGFNVSDYVLRLKMEQAAELL 540 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 H +A+ GYH+ +YFI VF+ YY +TP EY+ Sbjct: 541 ADHSLKNFEIALKLGYHNPNYFIRVFKKYYSVTPQEYR 578 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSI 209 IN + A + +L ++A+ + ++P + + E ++ LT+ R+ R++ L+ + Sbjct: 408 INAHYAEQLSLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVRLSRSVWLLENTALRV 467 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + +A GY++ SYF +F+ YGM+P EY+ + Sbjct: 468 QMIAQQVGYYNASYFSTIFKKKYGMSPYEYRRK 500 >UniRef50_B8KT68 Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KT68_9GAMM Length = 354 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 162 ARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 A IA L MSP L+++L +E ++ + R QRA L+V FS+ +A GY + Sbjct: 258 AVIADRLRMSPRTLRRRLADEGHTFRDAKRQAREQRAKYLLVNSNFSLSEIAFELGYSEL 317 Query: 222 SYFIYVFRNYYGMTPTEYQERSAQRLSN 249 S F FR + G P Y+E SA+ L+ Sbjct: 318 SAFSRAFRAWTGEAPQAYRE-SARHLTT 344 >UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA65_9BACT Length = 288 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIH 205 C I+ N +ASEL + P L + R ++SQ L E R+++A L+ Sbjct: 195 ACAGISRNFDRSINRESVASELRIHPQHLSRLFSRFTGRTFSQYLLEFRLKKAAVLLEGK 254 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 G ++ VA +CG+ S +YF+ FR +YG TP + Sbjct: 255 GRTVAEVAAACGFGSDAYFVRCFRRHYGHTPGAH 288 >UniRef50_B0NYF7 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NYF7_9CLOT Length = 320 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRA 198 Q + + ++ +++ ++ A +A +S + LK + YS+LL E RM++A Sbjct: 201 QIQIARKTMDILTEDLSKRYSAATLAKHFGISETSLKNYFQGVYGRGYSELLNEIRMKKA 260 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +LI+ + I ++ + G+ + S F F+NYYG P EY+ + Sbjct: 261 AELILKNSMKISEISDAVGFATQSRFAKAFKNYYGAAPLEYKRK 304 >UniRef50_B2JT57 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JT57_BURP8 Length = 251 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGF 207 T + +N+ H T+A +A + MS ++ R+E + S+ L + R+Q++ QL++ Sbjct: 146 TFLKSNLEHVVTVADVARTVAMSERNFLRRFRQEFGITPSEYLLQTRLQKSCQLLLESEL 205 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + ++A CG S + +FR +GM+PTEY+ Sbjct: 206 PVDKIARRCGMTSGTRLAKIFRKRFGMSPTEYR 238 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 132 IPLLLNVLQPNMRT------RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-T 184 +PL V Q ++T +V + N ++ TL +A + ++P K ++E Sbjct: 306 VPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQ 365 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 ++ +T R+++A QL+ G ++K GY +YF VF+ MTPTEY++ Sbjct: 366 TFIDYVTHLRIEKAKQLMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQDVC 425 Query: 245 QR 246 +R Sbjct: 426 ER 427 >UniRef50_C9Y8T8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8T8_9BURK Length = 299 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%) Query: 112 LRKRALIFALLSVF----------LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTL 161 L++RAL+ A LS L E P LLN L+ ++ R+ V + T+ Sbjct: 163 LQQRALLAAALSSVARLLDAPQKTLSQE---PALLNQLRRLVQNRMGEV-------DLTV 212 Query: 162 ARIASELLMSPSLLKKKLREEETSY-SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 A +A EL + L + Q++ + R+ RA +L+ +IK VA CG+ S Sbjct: 213 ASLAQELGCTADYLSHLYSSHTGDHLWQVILQQRLARAARLLTEGDAAIKEVAWCCGFAS 272 Query: 221 VSYFIYVFRNYYGMTPTEYQER 242 SYFI FR ++G+TP Y+ R Sbjct: 273 ASYFIRCFRQHFGLTPKAYRTR 294 >UniRef50_A0M222 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0M222_GRAFK Length = 1406 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 17/154 (11%) Query: 92 PVFQEVAQLSQNKNLRYAEMLRKR-----ALIFALLSVFLEDEHFIPLLLNVLQPNMRTR 146 P E+ QL + LRKR L ++V DE F+ +++++ Sbjct: 1257 PFNLELLQLKLKNIITKRNHLRKRFNREIILKPEDVTVTSADEKFLQQAMDIVE------ 1310 Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIH 205 NN + ++++ + E+ +S S L KL+E S S+ + R++RA+QL+ Sbjct: 1311 -----NNMMNTDFSVEMLVKEMGLSRSNLYLKLKEITGLSSSEFIRSIRLKRAVQLLEKS 1365 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S+K + G+++ SYF F+ +G TP+EY Sbjct: 1366 DLSVKEIMYMTGFNTASYFAKCFKKQFGKTPSEY 1399 >UniRef50_UPI0001789612 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789612 Length = 405 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Query: 158 EWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 E TL A L +SP L + L++E TS+ L+T+ R+Q+A+QL+ SI +A Sbjct: 314 ELTLESFAQALQVSPVYLSRMLKKELGTSFITLMTQTRIQKAIQLLNATELSILDIAERV 373 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQERSA 244 GY S YF F+ G++P Y++ +A Sbjct: 374 GYDSQHYFSTAFKKVMGVSPNRYRKGAA 401 >UniRef50_B3C929 Sensor protein n=8 Tax=Bacteroides RepID=B3C929_9BACE Length = 1344 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Query: 136 LNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 LN L ++ +I NI E +A IA ++ MS S L +K++ + S ++ + + Sbjct: 1234 LNRLDNEFMQKITQIIEENIEMEKMDVAFIADKMCMSHSTLYRKIKGLADMSANEFIRKV 1293 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +M++++++++ ++I ++ G+ SV+YF F+N YG++P+ Y Sbjct: 1294 KMRKSVEMLISGEYTISEISYMTGFSSVAYFRQCFKNEYGVSPSGY 1339 >UniRef50_C6JF00 Two component transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JF00_9FIRM Length = 392 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 N + T I NN H TL+ I++ + +S S L + + E TS + L R+++A Sbjct: 288 NDVAKTLTYIENNYMHRLTLSSISANVNLSTSYLCRVFKSEVGTSITSYLNNLRIRKAAT 347 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 LI + FS+K ++V G YF +F+ G++P+EY +R Sbjct: 348 LIKENTFSLKEISVMVGIDDQLYFSRLFKKCMGISPSEYGKR 389 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIV 203 + IN N E +LA+I++ +P K ++ SY LT+ R+Q+A +L+ Sbjct: 415 NKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKTYLTKLRIQKACELLK 474 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 SIK +A G+ +YFI F+ + G+TP+ ++ Q Sbjct: 475 NSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMPEQ 516 >UniRef50_A4C5F8 Transcriptional regulator, AraC family protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5F8_9GAMM Length = 338 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 49/78 (62%) Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 L +A +L +SP+ LK+KL++ +S+L + R Q+A+ ++ G+S ++VA + + Sbjct: 254 LEEVAEQLCISPATLKRKLKQHGCQFSELKDQVRQQKAIFAMLEQGYSNEKVAFALQFSD 313 Query: 221 VSYFIYVFRNYYGMTPTE 238 ++ F F+ + GMTP++ Sbjct: 314 LTNFRRTFKRWTGMTPSQ 331 >UniRef50_C6J3K3 AraC family two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3K3_9BACL Length = 523 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Query: 154 NIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIH-GFSIKR 211 N+ E TL ++AS +P+ + + +EE ++S + R+++A +L+ H G I Sbjct: 432 NLGGEITLKKVASHFSFTPNYMGRIFKEETGENFSDYVVRIRLKKAAELLREHPGMKIYE 491 Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 A + G++ + YF +F+ +G++P+EY+ +S Sbjct: 492 AAYATGFNHLPYFTKLFKESFGVSPSEYRSKS 523 >UniRef50_B6BG36 Transcriptional Regulator, AraC family, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BG36_9RHOB Length = 349 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 47/79 (59%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 IA+ L MS L+++L +E +S+LL CRM+ A ++++ G + ++ GY VS Sbjct: 255 IAAALGMSRRTLRRRLEDEGQKFSRLLAGCRMEIAKRMLLAPGAQLHDISERLGYSEVSA 314 Query: 224 FIYVFRNYYGMTPTEYQER 242 F FR G TP++++++ Sbjct: 315 FERAFRQREGATPSQFRKQ 333 >UniRef50_C0ACQ1 AraC/XylS family transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACQ1_9BACT Length = 105 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Query: 143 MRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 M + +NNN A E T ++A+ + + P+ L E + + L RM+RA L Sbjct: 1 MWWETVSYLNNNYADPELTREKVATAMGVHPNYLSSLAARESDGFHRTLEAIRMERAKHL 60 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + +SIK +A CGY S +F + FR G+ P + ++S Sbjct: 61 LSQGKWSIKEIATQCGYASAVHFSHAFRRVAGIAPRKASKQS 102 >UniRef50_C7PMQ7 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMQ7_CHIPD Length = 331 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 45/82 (54%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 +L+ IA+ +SP L++KL+EE SY + E R A+ + + +K ++ GY+ Sbjct: 249 SLSEIAANFNVSPRTLQRKLKEEGISYQDVADEVRKSLAIHYLEEGDYPVKTISYMLGYN 308 Query: 220 SVSYFIYVFRNYYGMTPTEYQE 241 +S F F+ + G TP YQ+ Sbjct: 309 ELSAFTRAFKRWTGKTPVSYQK 330 >UniRef50_C9L8Z4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9L8Z4_RUMHA Length = 266 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%) Query: 136 LNVLQPNMRTRVCTVINNNIAHE---WTLARIASELLMSPSLLKKKLREEE-TSYSQLLT 191 LN M R+ +V++ + H +T AR+ + + +K +E+ S + L Sbjct: 153 LNSGTERMDERIRSVVDFMVLHPTETYTTARLCEMAGLGETRFRKLFKEQTGKSPGEYLR 212 Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + RM A + +++ S+ +A S GY V++FI VF+ Y+G+TP +Y++ S + Sbjct: 213 DMRMTVAGRRLLLSAESVSDIAYSVGYEDVNFFIRVFKKYFGVTPNQYRKVSKE 266 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE--DEH--FIPLLLNVLQPNMRTRVC 148 +F+E+ +L QN++ Y +R++A++ ++++FL D H F+P L ++ ++ Sbjct: 127 LFRELVELYQNRS--YLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIE--RLKQIE 182 Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGF 207 I N++ TL ++A + + P+ L + + + L RMQ+A L+ Sbjct: 183 AFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDL 242 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 +IK +A G+ ++F FR +PTEY+ R+ + Sbjct: 243 AIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHRAGR 280 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 15/159 (9%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE-------DEHFIPLLLNVLQPNMRT 145 +F + ++ + KNL AE L+ + L + S+ +E DE N L P + Sbjct: 117 LFSLLKEMLKRKNLTLAEELKLQGLFYEFFSLIVEENSIEEKDEK------NELNPYV-D 169 Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVI 204 ++ T I NN + + I + ++ S L ++ + + LT R+ RA +L+ I Sbjct: 170 KIITYIKNNYWDDINVNNIIEYVGLNRSYLSTLFKKNMGITIQEYLTVFRLSRANELLDI 229 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 SI+ VA SCGY F ++ YG+TPT+++++ Sbjct: 230 TNESIENVANSCGYKDPLVFTKAYKKKYGVTPTQHRKKD 268 >UniRef50_B7S1T1 Transcriptional regulator, AraC family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1T1_9GAMM Length = 361 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 48/83 (57%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 + + IA++L MS S L+++L+ E TSY QL E R Q A+ ++ + ++ G+ Sbjct: 270 SFSDIAAQLHMSESSLRRRLQGESTSYQQLKDEVRCQVAIDKLLNEDSKVADLSDYLGFT 329 Query: 220 SVSYFIYVFRNYYGMTPTEYQER 242 S F+ F+N+ G TP Y+E+ Sbjct: 330 EPSSFVRSFKNWTGETPRTYREK 352 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVI 204 ++ I +N + TL +A E+ MS K +++ ++ LT R+ +A +L+ Sbjct: 429 KIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTNLRVTKAKELLED 488 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 SIK V GY +YF +F+ GMTPTEY RSA Sbjct: 489 ETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEY--RSA 526 >UniRef50_UPI000178A004 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A004 Length = 514 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQLIVIHGFSI 209 I +++ +L IA ++ +SP + K REE S +Q +T RM++A++L+ + Sbjct: 421 IKDHLKEPISLPVIAEQVGLSPHYISKLFREETGSTVNQYITRLRMEKAIELLRHSNKKV 480 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +A G S YF FRN+ G++PT+Y+ Sbjct: 481 YEIAEEVGIPSYRYFTVTFRNWTGVSPTDYK 511 >UniRef50_C1A7J5 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7J5_GEMAT Length = 346 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 45/81 (55%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A L MS L ++L+ E TS+S ++ R +RA L+ S +VA+ G+ + Sbjct: 259 VAKRLAMSARTLHRRLQAESTSFSAIVESLRRERAELLLADSTMSASQVAMLLGFAEPAT 318 Query: 224 FIYVFRNYYGMTPTEYQERSA 244 F FR + GMTP+ ++ R+A Sbjct: 319 FFRAFRRWTGMTPSAWRVRAA 339 >UniRef50_C5ET72 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET72_9FIRM Length = 539 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 10/115 (8%) Query: 128 DEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE-EETS 185 D HFI + VLQ +I+ + A +L IASELL+SPS L + + + S Sbjct: 420 DRHFIEEV--VLQSQ------KIIDRDFAKACLSLNTIASELLVSPSYLSRSFTKIQGIS 471 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + +T CRM+ A L+ SI +++ GY + YF F++++G+ P+ Y+ Sbjct: 472 LTAYITRCRMEHARDLLKNTDMSIAQISEQSGYSDLFYFSKRFKSFWGVPPSRYR 526 >UniRef50_C9NYS3 Transcriptional regulator AraC family n=9 Tax=Vibrionales RepID=C9NYS3_9VIBR Length = 349 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 54/104 (51%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 PN++ ++ + ++ ++SEL MS L++ L+ E+T Y Q+L R A Sbjct: 238 PNLKEKITQIFIERPGRYPSIEALSSELGMSSRTLRRHLKAEQTGYQQILDHVRFHLAKY 297 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 +V G +I+ ++ G+ + F + FR + G +P ++ ++A Sbjct: 298 YLVSTGLNIEEISERVGFSDSANFRHAFRKWNGCSPKAFRNQAA 341 >UniRef50_B1C0X8 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0X8_9FIRM Length = 293 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Query: 160 TLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 TL +A+ L ++P + L + +++ L+TECR+++A +L+ + IK +A S G+ Sbjct: 209 TLNNVAAYLEVTPGYISNLLSSYTSKNFTDLVTECRIEKAKELLK-ENYQIKEIASSLGF 267 Query: 219 HSVSYFIYVFRNYYGMTPTEYQER 242 S +YF VF+ G+TP EY+ + Sbjct: 268 GSHNYFSKVFKKVTGLTPKEYKAK 291 >UniRef50_A6VTM5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VTM5_MARMS Length = 257 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 49/94 (52%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 ++ ++ ++ L ++A+ MS + L ++L+EE T + LLT RM AL L+ Sbjct: 160 KITELLQQAPWQDYQLDQVATHFSMSRATLIRRLKEENTQFRTLLTRVRMNYALSLMQQG 219 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +AV CGY S F F +G+TP++Y Sbjct: 220 YRQQMDIAVRCGYQSQERFSQRFYKSFGITPSQY 253 >UniRef50_A6F6Z7 Probable transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F6Z7_9GAMM Length = 354 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%) Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 +A++L MS L++KL++E+TSY +LL E R+ A Q + I +A+ G+ Sbjct: 265 VAAQLNMSERTLQRKLQQEQTSYQKLLDEARLSLAQQYLTKSKAGIDEIAIMLGFSETRS 324 Query: 224 FIYVFRNYYGMTPTEYQE 241 F F+ + G TP Y+E Sbjct: 325 FFRSFKLWTGQTPNVYRE 342 >UniRef50_A6NST3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NST3_9BACE Length = 304 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSI 209 + ++++ + T+A ++ L +SP+ LK + R TS LT+ RM+RA +LI I Sbjct: 202 MESHLSEKITIADLSRLLAVSPTYLKAEFRRIYGTSIHGYLTDLRMRRAAELIHCTDLPI 261 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 ++A GY ++ F VF+ YYG+TP ++++ S Sbjct: 262 YQIAQQVGYIGMNQFSSVFKRYYGVTPGQFKKMS 295 >UniRef50_C6IYS4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYS4_9BACL Length = 527 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 1/99 (1%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQLIVI 204 R + + A E +L ++A+ + + PS L + ++E S + +T RM+RA++L+ + Sbjct: 421 RAKAYMESCPAEELSLQQVAAYVHLHPSHLSELFKKETGSTFGYYVTALRMRRAMELLAV 480 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + +A GY V YF +F+ + G TP+E++E + Sbjct: 481 SPAKVSEIAGLTGYEDVKYFSRLFKKHTGKTPSEFREEA 519 >UniRef50_Q1JFS4 Two-component response regulator yesN n=16 Tax=Streptococcus RepID=Q1JFS4_STRPD Length = 495 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ + I E TL IA L ++ L + + E E S++Q L R+Q+A Q Sbjct: 382 DLVSETIDCIRKEYHQELTLKAIADRLHVNGVYLGQCFKNETERSFTQYLNHVRIQKAQQ 441 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 L++ SI +A GY++ YFI +F+ G++P E+++R Sbjct: 442 LLLYTNQSINEIAYETGYNTNHYFIKMFKKLNGLSPKEFRDR 483 >UniRef50_C4G3Y7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3Y7_ABIDE Length = 527 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Query: 158 EWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 E T+ +IA+ L + S L++ ++E + LT+ RM++A +L+V + + ++ Sbjct: 442 ELTVEQIAAGLYVDSSYLRRTFKKEFNMKITDFLTQIRMEKARELLVQDRYKLSDISEMV 501 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQE 241 G++ SY VF+ Y+G +P+EY E Sbjct: 502 GFNDSSYLSKVFKKYFGKSPSEYYE 526 >UniRef50_Q9KFT3 Methylphosphotriester-DNA alkyltransferase (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KFT3_BACHD Length = 181 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209 I+ + E L+ IAS+L ++P L++ +EE E S SQ L + R++ AL L+V +I Sbjct: 87 ISAHYTEELNLSVIASQLYVNPFYLRRIFKEETELSPSQYLLKKRIEAALALLVNQEETI 146 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +A G+ S ++F VFR+ G+ P +Y+E Sbjct: 147 TDIAFKVGFKSPAHFSTVFRHMIGLPPQKYRE 178 >UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-binding domain n=6 Tax=Proteobacteria RepID=Q0K404_RALEH Length = 796 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%) Query: 146 RVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204 RVC+ I+ +A E +LA IA++ MS L+K + +S+S L R++R + Sbjct: 220 RVCSRIDARLAEPELSLAAIAADERMSARYLQKLFEKSGSSFSAYLRTSRLERCRADLAN 279 Query: 205 HGF---SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 H + S+ + G++ S+F + FR +G++P Y+E++A +R Sbjct: 280 HQYDKLSVSDICYRWGFNDPSHFSHAFREQFGISPRAYREQTANTPEHR 328 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ T + N+ E L +A + +PS + ++++S+ L RM++A + Sbjct: 195 DIMTDCGEYLENHYMDEINLESVAEKYHFNPSYFSTLFKNTYKSTFSEYLIRIRMEKARE 254 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 L++ ++ +AV GY +YF+ F+ YY MTP EY++ S + Sbjct: 255 LLLTTESRVRDIAVLTGYRDANYFVRAFKRYYEMTPEEYRKMSGR 299 >UniRef50_C6CVE0 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVE0_PAESJ Length = 515 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQR 197 ++P+ ++ I ++ + +L I + +SP + K +++ +Y LTECR+++ Sbjct: 403 IEPDAIQQIKQYITDHSHEDISLEAIGRMVGLSPFYISKMFKDQLGINYIDFLTECRIKK 462 Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 A++L+ S+K + GYH +YF VF+ ++PTEY++ Sbjct: 463 AIKLMGDPERSLKEITYMVGYHDPNYFSKVFKKMCEVSPTEYRK 506 >UniRef50_B4RXH5 Putative transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RXH5_ALTMD Length = 347 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 RIAS L +SP L++KL+ TS+ QLL + R R +L+ H SI A G+ S Sbjct: 267 RIASALFISPRTLQRKLKLSGTSFQQLLNDERKCRLDELLKHH--SIADTADLLGFKEQS 324 Query: 223 YFIYVFRNYYGMTPTEYQER 242 F + F+ +Y TP YQ++ Sbjct: 325 SFTHAFKKWYSTTPLRYQKQ 344 >UniRef50_C5BHZ4 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BHZ4_TERTT Length = 350 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL-MSPSLLKKKLR 180 L FL + + + L+ + RV ++ + A SE+L MS + ++++L Sbjct: 223 LMAFLSTAPYHLVTQDPLKLSFTERVRNILKREVNRSIPSAEQLSEMLNMSVTTMRRQLS 282 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +E TSY +L ECRM+ A+ + S +A G+ S F F+ + G TP EY+ Sbjct: 283 KEGTSYQKLKDECRMEVAIHYLACAELSNADIAEKLGFDEPSAFFRSFKKWTGQTPGEYR 342 Query: 241 ER 242 ++ Sbjct: 343 QQ 344 >UniRef50_C7G923 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G923_9FIRM Length = 280 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFS 208 +I NN W + +A++L +SPS L+ R+ +S + E R++RA L+ +S Sbjct: 158 MIYNNPQLPWNINMMAAKLHLSPSHLQTLYHRQFGSSCMDNVIEGRLRRAQDLLEYSEYS 217 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 I+ ++ CGY++V +F FR + G TP +Y++ ++ Sbjct: 218 IRDISEQCGYNNVEHFCRQFRQHNGCTPGQYRKNAS 253 >UniRef50_Q3KCK3 Putative transcriptional Regulator, AraC family n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KCK3_PSEPF Length = 350 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 46/80 (57%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 T+ R+A + ++P L++ L EE TS+ QLL E R Q A + + + S+ +VA GY Sbjct: 250 TIDRVADCMAVTPRSLQRHLAEENTSFQQLLDETRQQLARKYLQVPTISLPQVAHLLGYA 309 Query: 220 SVSYFIYVFRNYYGMTPTEY 239 VS F F ++G++ E+ Sbjct: 310 DVSTFSRAFHRWFGVSVLEW 329 >UniRef50_A9G936 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G936_SORC5 Length = 352 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 E L IA+ L MSP L+++L+EE TS S LL R A + + +I +A G Sbjct: 247 EPALPAIAARLRMSPRSLQRRLKEEGTSLSSLLDALRADLAARYLSESRDAISEIAFLLG 306 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + VS F F+ + G+TP Y+ R A R Sbjct: 307 FSEVSTFHRAFKRWTGVTPAAYR-RGAGR 334 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 TLAR+A L+ +L+ R ++ +Q L + R+Q+A Q+++ + +A CG+ Sbjct: 214 TLARVA--LISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQCGFQ 271 Query: 220 SVSYFIYVFRNYYGMTPTEYQERSAQ 245 S SYF FR G TP EY++R Q Sbjct: 272 SSSYFTKTFREQIGCTPLEYRKRDQQ 297 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax... 376 e-103 UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment)... 226 8e-58 UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glut... 217 3e-55 UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Ta... 179 7e-44 UniRef50_P10805 Porin thermoregulatory protein envY n=41 Tax=Ent... 167 5e-40 UniRef50_B5FRI8 AraC family regulatory protein n=32 Tax=Enteroba... 148 2e-34 UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicu... 147 4e-34 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 147 5e-34 UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi... 146 8e-34 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 145 1e-33 UniRef50_P68913 Uncharacterized HTH-type transcriptional regulat... 145 2e-33 UniRef50_Q04819 ORF11 n=5 Tax=Salmonella enterica subsp. enteric... 143 6e-33 UniRef50_Q83RF4 HTH-type transcriptional regulator ydeO n=59 Tax... 142 1e-32 UniRef50_P05052 HTH-type transcriptional regulator appY n=6 Tax=... 142 1e-32 UniRef50_C5CTH9 Transcriptional regulator, AraC family n=1 Tax=V... 141 2e-32 UniRef50_UPI0001C3522D two-component system, response regulator ... 140 4e-32 UniRef50_B7M6J8 Putative AraC-type regulatory protein encoded in... 138 2e-31 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 137 5e-31 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 137 5e-31 UniRef50_D0YX71 Transcriptional regulator AraC family protein n=... 136 6e-31 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 136 7e-31 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 136 8e-31 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 136 1e-30 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 135 1e-30 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 135 1e-30 UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Cl... 135 1e-30 UniRef50_Q93SE2 Putative uncharacterized protein n=1 Tax=Escheri... 135 2e-30 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 135 2e-30 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 135 2e-30 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 134 3e-30 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 134 4e-30 UniRef50_C6PB97 Transcriptional regulator, AraC family n=1 Tax=T... 133 5e-30 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 133 5e-30 UniRef50_A6T768 Bacterial regulatory protein, AraC family n=48 T... 133 6e-30 UniRef50_A7XY51 LngS n=3 Tax=Enterobacteriaceae RepID=A7XY51_ECOLX 133 7e-30 UniRef50_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibrio... 133 8e-30 UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein ... 133 8e-30 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 132 1e-29 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 131 2e-29 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 131 3e-29 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 131 3e-29 UniRef50_B6EKX1 HTH-type transcriptional regulator, AraC family ... 130 3e-29 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 130 5e-29 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 130 6e-29 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 130 6e-29 UniRef50_B7LQH4 GadW HTH-type(AraC-type) transcriptional positiv... 130 6e-29 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 129 1e-28 UniRef50_P32326 Urease operon transcriptional activator n=12 Tax... 129 1e-28 UniRef50_P63202 HTH-type transcriptional regulator gadW n=57 Tax... 129 1e-28 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 128 1e-28 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 128 2e-28 UniRef50_C6LB63 Putative response regulator receiver domain prot... 128 2e-28 UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vi... 128 2e-28 UniRef50_A7LR14 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8... 128 3e-28 UniRef50_C2L0L9 Response regulator receiver protein n=2 Tax=Lach... 128 3e-28 UniRef50_C8WRN2 Transcriptional regulator, AraC family n=2 Tax=A... 128 3e-28 UniRef50_A6AXU3 Transcriptional regulator, AraC family protein n... 127 3e-28 UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi... 127 4e-28 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 127 4e-28 UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillu... 127 4e-28 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 127 4e-28 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 127 4e-28 UniRef50_C6D5X4 Two component transcriptional regulator, AraC fa... 127 6e-28 UniRef50_Q0VN05 Transcriptional regulator, AraC family n=2 Tax=A... 127 6e-28 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 126 7e-28 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 126 7e-28 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 126 8e-28 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 126 8e-28 UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n... 126 8e-28 UniRef50_A1TWU6 Transcriptional regulator, AraC family n=2 Tax=M... 126 9e-28 UniRef50_A6GTF7 Putative transcriptional regulator n=1 Tax=Limno... 126 9e-28 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 126 9e-28 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 125 1e-27 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 125 1e-27 UniRef50_C6IYS4 Response regulator n=1 Tax=Paenibacillus sp. ora... 125 1e-27 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 125 1e-27 UniRef50_B5JU19 Transcriptional regulator, AraC family n=1 Tax=g... 125 1e-27 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 125 1e-27 UniRef50_B6XD52 Putative uncharacterized protein n=2 Tax=Provide... 125 1e-27 UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 125 1e-27 UniRef50_UPI0001789612 two component transcriptional regulator, ... 125 2e-27 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 125 2e-27 UniRef50_P41782 Transcriptional regulator hilD n=38 Tax=Salmonel... 125 2e-27 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 125 2e-27 UniRef50_C4V3H9 Response regulator n=2 Tax=Selenomonas RepID=C4V... 125 2e-27 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 125 2e-27 UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=S... 125 2e-27 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 125 2e-27 UniRef50_C7GHF1 Putative two-component response regulator n=1 Ta... 125 2e-27 UniRef50_Q47ZJ7 Transcriptional regulator, araC family n=2 Tax=A... 124 3e-27 UniRef50_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis ... 124 3e-27 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 124 3e-27 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 124 3e-27 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 124 4e-27 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 124 4e-27 UniRef50_Q1N3I2 AraC-type DNA-binding domain-containing protein ... 124 4e-27 UniRef50_C6UHW7 Putative AraC-type regulatory protein encoded in... 123 4e-27 UniRef50_B9JNI2 Transcriptional regulator protein n=2 Tax=Bacter... 123 5e-27 UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V... 123 5e-27 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 123 5e-27 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 123 5e-27 UniRef50_B3C9G8 Sensor protein n=2 Tax=Bacteroides RepID=B3C9G8_... 123 5e-27 UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 123 5e-27 UniRef50_C5BHZ4 Helix-turn-helix-domain containing protein, AraC... 123 5e-27 UniRef50_B0A945 Putative uncharacterized protein n=1 Tax=Clostri... 123 6e-27 UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococ... 123 6e-27 UniRef50_A0Z3Z2 Transcriptional regulator, AraC family protein n... 123 6e-27 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 123 6e-27 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 123 7e-27 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 123 8e-27 UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Pae... 123 9e-27 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 123 9e-27 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 123 9e-27 UniRef50_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproduce... 122 1e-26 UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronoba... 122 1e-26 UniRef50_D2QQS8 Histidine kinase n=1 Tax=Spirosoma linguale DSM ... 122 1e-26 UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n... 122 1e-26 UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotro... 122 1e-26 UniRef50_D2LZT6 Two component transcriptional regulator, AraC fa... 122 1e-26 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 122 1e-26 UniRef50_A6Q8S4 Transcriptional regulator, AraC family n=1 Tax=S... 122 1e-26 UniRef50_B8FMW7 Transcriptional regulator, AraC family n=1 Tax=D... 122 2e-26 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 122 2e-26 UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Cl... 122 2e-26 UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostri... 122 2e-26 UniRef50_B1JCK3 Transcriptional regulator, AraC family n=16 Tax=... 122 2e-26 UniRef50_B3CG99 Sensor protein n=4 Tax=Bacteroides RepID=B3CG99_... 121 2e-26 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 121 2e-26 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 121 2e-26 UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1... 121 2e-26 UniRef50_B5JUK1 AraC-type DNA-binding domain-containing protein ... 121 2e-26 UniRef50_B3C5Z2 Sensor protein n=2 Tax=Bacteroides RepID=B3C5Z2_... 121 3e-26 UniRef50_A4Y0S8 Transcriptional regulator, AraC family n=1 Tax=P... 121 3e-26 UniRef50_A7VU71 Putative uncharacterized protein n=1 Tax=Clostri... 121 3e-26 UniRef50_A6KXQ8 Sensor protein n=2 Tax=Bacteroides RepID=A6KXQ8_... 121 3e-26 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 121 3e-26 UniRef50_C6CZ56 Two component transcriptional regulator, AraC fa... 121 3e-26 UniRef50_A9KJ06 Two component transcriptional regulator, AraC fa... 121 3e-26 UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=D... 121 3e-26 UniRef50_Q21JI5 Transcriptional regulator, AraC family n=1 Tax=S... 121 3e-26 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 121 3e-26 UniRef50_C6IY72 Response regulator n=1 Tax=Paenibacillus sp. ora... 121 3e-26 UniRef50_B5ETV0 AraC-type DNA-binding domain-containing protein ... 121 3e-26 UniRef50_B6RAA0 Transcriptional regulator, AraC family n=4 Tax=A... 121 3e-26 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 120 4e-26 UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 ... 120 4e-26 UniRef50_B2HZ04 AraC-type DNA-binding domain-containing protein ... 120 4e-26 UniRef50_UPI0001968F18 hypothetical protein BACCELL_00802 n=1 Ta... 120 4e-26 UniRef50_A6WTM9 Helix-turn-helix-domain containing protein AraC ... 120 5e-26 UniRef50_C6D789 Two component transcriptional regulator, AraC fa... 120 5e-26 UniRef50_C4T4E3 AraC-type DNA-binding domain-containing protein ... 120 5e-26 UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostri... 120 6e-26 UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostri... 120 6e-26 Sequences not found previously or not previously below threshold: UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 141 3e-32 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 137 4e-31 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 132 1e-29 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 131 3e-29 UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=... 130 4e-29 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 130 4e-29 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 130 6e-29 UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipeloth... 129 9e-29 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 129 1e-28 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 128 1e-28 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 128 2e-28 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 127 3e-28 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 127 3e-28 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 127 4e-28 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 127 5e-28 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 127 5e-28 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 127 5e-28 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 127 6e-28 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 127 6e-28 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 126 8e-28 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 126 8e-28 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 126 8e-28 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 126 8e-28 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 126 9e-28 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 126 9e-28 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 126 1e-27 UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=C... 125 1e-27 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 125 2e-27 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 125 2e-27 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 124 3e-27 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 124 3e-27 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 124 4e-27 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 124 4e-27 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 124 4e-27 UniRef50_UPI0001788C2F two component transcriptional regulator, ... 124 4e-27 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 123 4e-27 UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. ora... 123 5e-27 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 123 5e-27 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 123 5e-27 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 123 6e-27 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 123 6e-27 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 123 6e-27 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 123 6e-27 UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostri... 123 6e-27 UniRef50_A6KWF7 Sensor protein n=7 Tax=Bacteroides RepID=A6KWF7_... 123 7e-27 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 123 7e-27 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 123 7e-27 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 123 8e-27 UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecali... 123 8e-27 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 123 8e-27 UniRef50_A4CGA1 Sensor protein n=1 Tax=Robiginitalea biformata H... 122 1e-26 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 122 1e-26 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 122 1e-26 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 122 1e-26 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 122 1e-26 UniRef50_B0MM97 Putative uncharacterized protein n=1 Tax=Eubacte... 122 1e-26 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 122 1e-26 UniRef50_B7ACV0 Sensor protein n=1 Tax=Bacteroides eggerthii DSM... 122 1e-26 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 122 2e-26 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 122 2e-26 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 122 2e-26 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 122 2e-26 UniRef50_A8S8J9 Putative uncharacterized protein n=1 Tax=Faecali... 122 2e-26 UniRef50_A7V9A8 Sensor protein n=2 Tax=Bacteroides RepID=A7V9A8_... 122 2e-26 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 122 2e-26 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 122 2e-26 UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecali... 122 2e-26 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 121 2e-26 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 121 2e-26 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 121 2e-26 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 121 2e-26 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 121 2e-26 UniRef50_A7M0D3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8... 121 3e-26 UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacteriu... 121 3e-26 UniRef50_UPI0001851370 two component AraC family transcriptional... 121 3e-26 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 121 3e-26 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 121 3e-26 UniRef50_UPI0001787D2D two component transcriptional regulator, ... 121 3e-26 UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID... 121 3e-26 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 121 3e-26 UniRef50_C9NPJ0 Transcriptional regulator AraC family n=1 Tax=Vi... 120 4e-26 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 120 4e-26 UniRef50_B5CYJ6 Putative uncharacterized protein n=1 Tax=Bactero... 120 4e-26 UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepI... 120 4e-26 UniRef50_C0CKI1 Putative uncharacterized protein n=1 Tax=Blautia... 120 4e-26 UniRef50_A4XWL1 Transcriptional regulator, AraC family n=5 Tax=B... 120 5e-26 UniRef50_UPI0001787EAA two component transcriptional regulator, ... 120 5e-26 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 120 5e-26 UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=... 120 5e-26 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 120 5e-26 UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 T... 120 5e-26 UniRef50_B7CDP9 Putative uncharacterized protein n=1 Tax=Eubacte... 120 5e-26 UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacte... 120 6e-26 UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=... 120 6e-26 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 120 6e-26 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 120 6e-26 UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori... 120 6e-26 >UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax=Bacteria RepID=GADX_ECO27 Length = 274 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 256/274 (93%), Positives = 260/274 (94%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS Sbjct: 1 MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 LLSVFLED FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274 ERSAQ L N AAS+ AQGNFYGTDRSAEGIRL Sbjct: 241 ERSAQELPNCGPAASMAAQGNFYGTDRSAEGIRL 274 >UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment) n=1 Tax=Citrobacter sp. MY-5 RepID=Q5G2X8_9ENTR Length = 170 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 167/170 (98%), Positives = 167/170 (98%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQSLHGNCLIAYAR YILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS Sbjct: 1 MQSLHGNCLIAYARRGYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVPVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 >UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glutamic acid decarboylase and transporter (GadA, gad BC) (AraC/XylS family) (Modular protein) n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH5_ESCF3 Length = 289 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 168/241 (69%), Gaps = 3/241 (1%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC--VENFVFVSRDTLSLFLP 64 +I + ++ ILT +G G+L+F D Q+ + +EN +++ T+SL + Sbjct: 22 PGVIICSINETILTFNDGNKITIAPGNLIFVDPRQLTITHYGELENVALITQKTISLLVS 81 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 L ++L +H++K +S + DI +F+ A LS +L AE LRKR+L+ AL+S+ Sbjct: 82 ALNSDSL-IHSYKAHNSPFIIRKCPDIAIFKYAANLSHKSDLSCAEKLRKRSLMLALMSL 140 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET 184 FL+D++FIPLL+ +L P++ TRVC VIN+NIA++W+L IASELLMSPSLLKKKL+ E+T Sbjct: 141 FLDDQNFIPLLMRILHPDITTRVCAVINSNIANDWSLTLIASELLMSPSLLKKKLQAEQT 200 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 +YSQLLTECRMQ+AL+L+ +++K+ A+ CGY SVSYFI VFR ++G+TPTEYQ++ Sbjct: 201 TYSQLLTECRMQQALKLLRCDDYAVKKTAILCGYKSVSYFIAVFRKHFGITPTEYQDKRQ 260 Query: 245 Q 245 Sbjct: 261 H 261 >UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Tax=Enterobacteriaceae RepID=ADIY_ECOLI Length = 253 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 131/232 (56%), Gaps = 11/232 (4%) Query: 26 YRYFNGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLH 74 + NG + + A+ + + C N + +S D + +L L ++ + Sbjct: 19 WIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIP 78 Query: 75 AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPL 134 ++ ++ ++ VF+ AQ S +E R RAL+F +LS FL+ + F+ L Sbjct: 79 VWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSL 138 Query: 135 LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECR 194 ++ +L+ + V +I ++I +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CR Sbjct: 139 MMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCR 198 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 M+ A+ +++ G +I +V+ SCGY+S SYFI VF+++YGMTP Y + +R Sbjct: 199 MRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250 >UniRef50_P10805 Porin thermoregulatory protein envY n=41 Tax=Enterobacteriaceae RepID=ENVY_ECOLI Length = 253 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 137/244 (56%), Gaps = 3/244 (1%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV---FVSRDTLSLFL 63 C++ + +++ N L + ++ N V ++R+ ++ +L Sbjct: 8 PCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYL 67 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 L + + ++++ ++ SR VF+ A S+ + R E RAL+F +LS Sbjct: 68 LFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSRPCEAELTRALLFTVLS 127 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 FLE FI LL+ +L+ ++R VC +I ++I H W L +AS L +SPSLLKKKL+ E Sbjct: 128 NFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLKKKLKNEN 187 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 TSYSQ++TECRM+ A+Q++++ +I +VA CGY S SYFI VF+ +YG+TP Y + Sbjct: 188 TSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYGLTPLNYLAKQ 247 Query: 244 AQRL 247 Q++ Sbjct: 248 RQKV 251 >UniRef50_B5FRI8 AraC family regulatory protein n=32 Tax=Enterobacteriaceae RepID=B5FRI8_SALDC Length = 291 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 9/240 (3%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLK 67 LI K +T +GEY +G L+F Q E ++ + + L +K Sbjct: 40 VLIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASIK 99 Query: 68 EEA-LNLHAHKKVSSLLVHHCSRDIPVFQEV-------AQLSQNKNLRYAEMLRKRALIF 119 L+ H S L ++ + E S NK+ + ++ +K LI Sbjct: 100 NAYNFFLYEHADFSDPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KKEYLIR 158 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 LLS F+ + L + Q + + +I ++I+ +W L I+ L MS S LK+KL Sbjct: 159 FLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCSTLKRKL 218 Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 ++E TS+S++ RM +A +L+ ++I RVA CGY S SYF VF+ ++ TP+E+ Sbjct: 219 KQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKTTPSEF 278 >UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B1BZ28_9FIRM Length = 432 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 108/245 (44%), Gaps = 18/245 (7%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + Y H + T V G N DL+ +Q + +N S T+ + Sbjct: 196 HKHYELTYVDHGSLDTTVEGTTYTLNSYDLMLYGPNQFHTQQITKN-KSCSYLTVIFNMD 254 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDI-PVFQEVAQLSQNKNLRYAEMLRKRAL--IFAL 121 ++ ++A+ + HC ++ +F + + S N +L Y++ L L I L Sbjct: 255 IIDDDAI---------LNRIFHCDNELHNIFNKFVKASSN-SLPYSKTLMLCYLQEIIIL 304 Query: 122 LSVFL---EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 L+ + E +H + Q + + +N+ I T+ I + +S S L+ Sbjct: 305 LTQYDSSGETKHISTGPMQHFQDGLLQEILDYMNSMITEPLTIEEICHKFSISRSSLQTL 364 Query: 179 LREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 R E S + + +++++ +LI + ++I +A G+ S+ YF F+ ++ +TP+ Sbjct: 365 FRNNLEISPKNYMVQIKLKKSKELIRENKYTISEIAFMLGFSSIHYFSRTFKQHFNLTPS 424 Query: 238 EYQER 242 EY ++ Sbjct: 425 EYAKK 429 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 23/253 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + Y + ++NG F GD++F +++ + EN V + +F P Sbjct: 59 HHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVM----DVIMFEP 114 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN-------KNLRYAEMLRKRAL 117 L L + + R PV E+A+L + + Y ++R + Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 118 IFALL------SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 F L S E ++ L+ V + ++ + WTL ++ +S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKE-----VLRTMELHLDYGWTLQELSDLTHLS 229 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 PS ++ TS L + R+ A+ L+ I +A +CG+ ++S F +F+ Sbjct: 230 PSRFSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQ 289 Query: 231 YYGMTPTEYQERS 243 + G +P+E +ER+ Sbjct: 290 HVGASPSEIRERA 302 >UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF84_VIBFU Length = 248 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 20/247 (8%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 G ++AYA H Y+ + + + A IRVD +V + +++P Sbjct: 3 GPPVLAYA-HDYMHGDTEAAHEH-QCAQFLHALNGVIRVDTAAGTWVVTANK--GMWIPA 58 Query: 66 LKEEALNLHAHKKVSSLLVHHCSR-DIP---VFQEVAQLSQNKNLRYAEMLRKRAL---- 117 +L + H KV +L V +R D+P V EV L ++ + + +R Sbjct: 59 GVSHSLRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTRE 118 Query: 118 --IFALLSVFLEDEHFIPLLLNVLQPNMRTRV--CTVINNNIAHEWTLARIASELLMSPS 173 IF L+ E P+ + P+ + C +++ IAH WT A L S Sbjct: 119 ERIFELI--LDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSER 176 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + +K ++E ++++ L + R+ AL+L+ G S+ A+ GY S S F +F++ Sbjct: 177 TVSRKFQQELGLTFTEWLRQKRLVHALELLA-SGHSVLDSALEIGYDSPSAFSAMFKSRI 235 Query: 233 GMTPTEY 239 G+TP+EY Sbjct: 236 GLTPSEY 242 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 97/246 (39%), Gaps = 11/246 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR----VDKCVENFVFVSRDTLS 60 H I L +NG GDL F A + +D E VF + L Sbjct: 38 HTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGGTPIDCVYECIVFDMKSLLK 97 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 + K+ +H K ++SLL V + + K L Y L + ++ Sbjct: 98 VNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFESMAQKKLGY--ELVTQGSLYH 155 Query: 121 LLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 LL + LE + N + N V ++I TL ++ M+P Sbjct: 156 LLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSKAAGMTPKYFC 215 Query: 177 KKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + R + S L R++ + + +V SI +A++CG++ +SYFI F+ Y G+T Sbjct: 216 RFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFIKTFKKYKGVT 275 Query: 236 PTEYQE 241 P +Y + Sbjct: 276 PKQYLK 281 >UniRef50_P68913 Uncharacterized HTH-type transcriptional regulator Rv1395/MT1440 n=15 Tax=Mycobacterium RepID=Y1395_MYCTU Length = 344 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59 L+ A + LT ++ + F D LV DAS + D F+ RD T Sbjct: 103 LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD---VRGFFIERDIAGIIATTT 159 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 S LP+ + A + A V + L+ +PV +VA + + + + L Sbjct: 160 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 218 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTR-VCTVINNNIAHE----WTLARIASELLMSPSL 174 A E I ++Q N R R + ++ + + + T +A EL M P Sbjct: 219 ADRHTL---EMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDMHPRT 275 Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 L+++L EE TS+ LL E R A+ L+ G ++++V+ GY VS F + F+ +YG+ Sbjct: 276 LRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGV 335 Query: 235 TPTEYQER 242 P+EY R Sbjct: 336 APSEYSRR 343 >UniRef50_Q04819 ORF11 n=5 Tax=Salmonella enterica subsp. enterica RepID=Q04819_SALTY Length = 259 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 10/188 (5%) Query: 52 VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 V ++R+TL F L + L + K + LV C D + +L + Y E Sbjct: 51 VVITRETLCRFARQLDVDVLKFYIPKDIPRYLVQPCPEDSVFRPLMVRLCAGTDNSYGET 110 Query: 112 LRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 + L FAL+S F E + F P L L+ +M +V TVIN N++ WT+ R+A EL + Sbjct: 111 GPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWTIHRVAGELYV 170 Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF------ 224 S SLLKKKL+EE TSY+++L ECRM++A +LIV+ ++K+VA CGY SV F Sbjct: 171 SVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPVFYQPVQE 230 Query: 225 ---IYVFR 229 I+ F+ Sbjct: 231 ILRIHAFK 238 >UniRef50_Q83RF4 HTH-type transcriptional regulator ydeO n=59 Tax=Enterobacteriaceae RepID=YDEO_SHIFL Length = 253 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 130/257 (50%), Gaps = 17/257 (6%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFV--SRDTLSLFLPM 65 C + + H + +++ +Y + +G L+ +A + + +F + + +T+ +L Sbjct: 5 CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64 Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 + + + K + + + E+ ++ + L+F+ LS+F Sbjct: 65 TNIQTVTVPVPAK----FLRASNVPTGLLNEMIAYLNSEERNHHNF--SELLLFSCLSIF 118 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS 185 + FI LL N + ++ +V ++N +AH W L I L +S SLLKKKL++E+T+ Sbjct: 119 AACKGFITLLTNGV-LSVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLKQEQTT 177 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP----TEYQE 241 +SQ+L + RMQ A LI + G S+ ++A CGY S SYFIY FR ++G +P EY+ Sbjct: 178 FSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYR- 235 Query: 242 RSAQRLSNRDSAASIVA 258 QR + ++ ++ A Sbjct: 236 --CQRHTGMNTGNTMSA 250 >UniRef50_P05052 HTH-type transcriptional regulator appY n=6 Tax=Escherichia coli RepID=APPY_ECOLI Length = 249 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 26/215 (12%) Query: 49 ENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY 108 +N +F+ D + LP+ + + KK + ++P + + +KN Sbjct: 27 KNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELP-----GKFTLDKNGYI 81 Query: 109 AEMLRKRALIFALL---------SVFLEDEHFIPLLLNVLQPNMRT------------RV 147 AE +L+F+L S++L++ I LL + ++ Sbjct: 82 AEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKI 141 Query: 148 CTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGF 207 +I+ NI +W L IA + S SL+KK+LR+E TS++++L + RM+ A +LI + + Sbjct: 142 TGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSY 201 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 SI VA CGY+S SYFI F++YYG+TP+ Y E+ Sbjct: 202 SINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEK 236 >UniRef50_C5CTH9 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTH9_VARPS Length = 313 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 29/263 (11%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV--DKCVENFVFVSRDTLSLF 62 H I + H +V G R F G L F ++ V + V+ D Sbjct: 27 HEYFQIQVSIHGGSQQVVGGAVRPFTAGHLSFVLPYRVHVVPHPPGARYAIVNFDQ-GFL 85 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC---------------SRDIPVFQEVAQLSQNKNLR 107 P L EAL+L + +R + E+A L N+ R Sbjct: 86 WPELAVEALDLEEVPAARQPELAPFLFQEYMDFHFGDADFARILGWLDELAAL--NRERR 143 Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR-------TRVCTVINNNIAHEWT 160 + + R ++ L++ H PLL + R RV + ++A E + Sbjct: 144 FGAVGAIRGILLQLMA-LACHRHEAPLLAQAALQSGRSAGHDALQRVMRYVREHLAEEMS 202 Query: 161 LARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 L A+ ++SP+ L L+++ ++++L+TE R++RA +L+V I +A CG+ Sbjct: 203 LNDAAAAAMLSPNYLAHLLKKQTQRTFTELVTERRLERAKELLVTSNARIGDIARQCGFG 262 Query: 220 SVSYFIYVFRNYYGMTPTEYQER 242 YF FR G+TP +++ + Sbjct: 263 DAVYFSRRFRLQSGVTPRQFRSQ 285 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 14/249 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H I + + V+ + GD++F Q+ +N + + + Sbjct: 46 HDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIM-EYENILFKSS 104 Query: 65 MLKEEALNLHAHKKVSSLLV----------HHCSRDIPVFQEVAQLSQNKNLR-YAEMLR 113 +LK +L K + L + PV + ++ +LR YA L Sbjct: 105 LLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLS 164 Query: 114 KRALIFALLSVFLEDEHFIPLL-LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 +A +F +L + + + +N + + I NN + IA+ S Sbjct: 165 IKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYSK 224 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S K +E S+ Q L + R++ A +L+ +I +A + G++++SYF F+ Sbjct: 225 SYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKK 284 Query: 232 YGMTPTEYQ 240 YG++P +Y+ Sbjct: 285 YGVSPRKYR 293 >UniRef50_UPI0001C3522D two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3522D Length = 495 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 10/221 (4%) Query: 30 NGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSL-LVHHCS 88 +G D +A + I +D ++ D+L L E+ H+K SL V +C Sbjct: 278 DGPDHPYAASGHISIDIVSDDLRLKDYDSLMHHL----EDLFESLKHEKTHSLIFVKYCF 333 Query: 89 RDI--PVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN--MR 144 ++ + + + + AE + A I L+ + + Q + Sbjct: 334 TELMKEIIHYLPDDQKPDLNKVAEKIYSSANIVELMDMTCSQAKKLLSQTQKNQGSCLKS 393 Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIV 203 ++ I N +L I+S +SP+ L ++E + + + E R+++A +L++ Sbjct: 394 DKIRQYIYQNYTQPLSLNDISSHFYISPNYLCSVFKKETGCNLMKFINEYRLEQAAKLLL 453 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + ++A + G+ + SYF FR+YYG +P Y+++ Sbjct: 454 ETEMKVNKIAETVGFSNPSYFSQRFRDYYGESPENYRQKET 494 >UniRef50_B7M6J8 Putative AraC-type regulatory protein encoded in prophage CP-933H ( transcription regulator) n=16 Tax=Escherichia RepID=B7M6J8_ECO8A Length = 250 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 20/161 (12%) Query: 85 HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR 144 +HC+ I +F E ++ F LS F ++ F L L+ + Sbjct: 101 NHCAEYIEIFDE-------------------SIAFTCLSAFSSEKQFGVFLFECLK-STE 140 Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204 +V T+I+ +++ W L I+S L +S SLLK+KL+EE S+S+++ + RMQ A L+ Sbjct: 141 AKVKTIIHTDLSAPWRLKDISSRLYLSESLLKRKLKEEGVSFSKIILDERMQMAEYLLST 200 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + I +VA CGY SVSYF YVFR Y+G++P++Y +RS++ Sbjct: 201 RCYPISKVAKVCGYASVSYFTYVFRRYFGVSPSQYSQRSSE 241 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 102/252 (40%), Gaps = 18/252 (7%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + L VN N GD+VF Q+ +++ + + + Sbjct: 41 HNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLH-SISQKDYSIMEYENILFKSS 99 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPV----------FQEVAQLSQNKNLR-YAEMLR 113 +LK +L K + LL + + + + + ++ + + R YA L Sbjct: 100 LLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLA 159 Query: 114 KRALIFALLSVFLED---EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 ++ +F + + + + P+ L+ + + + + ++ IA Sbjct: 160 VKSYLFQIFYLLISNCGLNQIKPISKKALEK--IKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S K +E S+ Q L + R++ A +L+ I +A++ G+ ++SYF F+ Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 230 NYYGMTPTEYQE 241 YG+TP +Y++ Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVI 204 + I+ + A TL +A + +SP K +E ++ +T R++RA + + Sbjct: 412 KAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAE 471 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 S+K + S GY+ +YF VF+ G++P+EY+++ R Sbjct: 472 TDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 137 NVLQP-NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECR 194 N +Q + I N + TL +A + +SP L K ++E + ++ +TE + Sbjct: 142 NSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKK 201 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAA 254 MQ+A +L+ + +A+ Y +YF VF+ G+TP+EY++RS + LS + + Sbjct: 202 MQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKKHNS 261 Query: 255 SIVAQGNF 262 V GN+ Sbjct: 262 --VLNGNW 267 >UniRef50_D0YX71 Transcriptional regulator AraC family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX71_LISDA Length = 321 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 36/273 (13%) Query: 5 HGNCLIA--YARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSR------ 56 + ++ Y H I+ + NG+ G V ++ + F +S Sbjct: 38 QSHIVLKEFYVDHHLIVNLKNGDGDVCINGQSVTISSN---ATLVIPKFSHISCTINQKD 94 Query: 57 --DTLSLFLPMLKEE----------ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNK 104 + L L M+ EE +L + + V+H + V ++ QL Q Sbjct: 95 CHKNIELQLLMVGEETIAQSFKYMASLKQPNTPTANCMPVYHLNETPDVVEQNFQLFQQS 154 Query: 105 -----NLRYAEMLRKRALIFALLSVFLEDEHFIPLL----LNVLQPNMRTRVCTVINNNI 155 + R + ++L F LL++ +E I + N +P RT + +I + Sbjct: 155 LPAVADTRLEKTFLTQSLFFILLAL---NEAGIDVFNVYRFNYDEPKERT-IARLITQDP 210 Query: 156 AHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVS 215 +W++ +A L + S L++ L +E S+SQLL + RM AL + +SI ++ Sbjct: 211 QRKWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVRMGLALNYLTFSNYSISQIGHR 270 Query: 216 CGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 G+ S +YF F+ YG+TP++++ S + Sbjct: 271 SGFGSAAYFCDAFKRKYGITPSQFRATSREHND 303 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 15/253 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF----VSRD 57 Q H A H + V G + G+ F ++ ++ K + + D Sbjct: 34 QHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHEIKSGGPSLHHAIVFNPD 93 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 L L + + + + + S P ++ + +R L A Sbjct: 94 ILDFTLYDICQHSFIRPVTSG-NLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCAS 152 Query: 118 ------IFALLSVFLEDEHFIPLLLNVLQ---PNMRTRVCTVINNNIAHEWTLARIASEL 168 I +L +F + + F+ ++ + N +V I+ N A +L +A Sbjct: 153 LSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKIC 212 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MSP+ ++E + E R+Q+A Q++ + +VA+S G+ + SYFI Sbjct: 213 FMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIRK 272 Query: 228 FRNYYGMTPTEYQ 240 FR Y +TPTEY+ Sbjct: 273 FREYKNVTPTEYR 285 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 136 bits (342), Expect = 8e-31, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 ++ + + + N + E +L ++ E+ +SP K +EE ++++ LT R+ +A Sbjct: 425 SESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKA 484 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 +L+ SIK + V GY +YF +F+ + G+TP EY+ER Sbjct: 485 KELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRERY 529 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 6/155 (3%) Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 S++ +LR AE L AL ++ D F L+ V ++ + + N Sbjct: 272 FSESDHLRTAEEL---ALWLTRMTDRFTDTVF--SLVEVKHRDIICKAIEYLKRNCRDRV 326 Query: 160 TLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 TL A + +SPS + +EE S++ LT R+ R +++ SI + CG+ Sbjct: 327 TLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGRAMLLDTDASIAEICDRCGF 386 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 SYF VFR Y G+TP ++ R + + + Sbjct: 387 DDQSYFTKVFRKYTGVTPGRFRARRGRPENGEEPG 421 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188 H+I + + I+ + H TL +A + +SP K ++ ++ Sbjct: 397 HYIQAWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFID 456 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +TE R+ RA + + S+K + GY+ +YF VF+ + GM+PTEY+++ Sbjct: 457 YVTEVRIARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKK 510 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 16/210 (7%) Query: 42 IRVDKCVENFVFVSRDTL---SLFLPMLKEEALNLHAHKKVSSLL----VHHCSRDIPVF 94 I + L++ + E L K + LL + I V Sbjct: 312 IHSINNPTQIPMIENYITQLCKLYIELFGENNLKYKVIKLIIMLLLETGIATSDESIDVE 371 Query: 95 QEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNN 154 + ++Q+ + + E+ +K A+LS+F + + ++N + + IN N Sbjct: 372 KLISQILNSSYEQIVEIFKK-----AVLSLFSKAKTKHEQIIN---NDSINKAIEFINQN 423 Query: 155 IAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 + E TL++I+S +P K ++ S+ LT+ R+Q+A QL+ SIK ++ Sbjct: 424 YSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEIS 483 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 + G+ +YFI F+ + GMTP+ ++ S Sbjct: 484 FAVGFSDPNYFIKAFKKFTGMTPSAFRSSS 513 >UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=C9XN35_CLODC Length = 312 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 27/258 (10%) Query: 6 GNCLIAYARHKY--ILTMVNGEYRYFNGG--------DLVFADASQIRVDKCVENFVFVS 55 + Y H + I+ +NG YF G D++F ++I +++ VF Sbjct: 44 KDIQFEYHNHDFNKIIIFINGNVTYFVDGIPYKLKPWDILFISNNEIH-KPVIDSNVFYE 102 Query: 56 RDTLSLFLPMLK---------EEALNLHAHKKVSSLLVH-HCSRDIPVFQEVAQLSQNKN 105 R + + +K E+ + K + L ++ H I F E +S++ Sbjct: 103 RIAIWISPEFMKKNSDATSDLEKCFKIATENKCNRLRLNIHDIESIKSFIEQINISESNT 162 Query: 106 LRYAEMLRK---RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162 E+LR L+ L +FL++E+ + +V +V IN+NI + ++ Sbjct: 163 EFGNEILRNALFIQLMIFLNRIFLKNEN-MESTEDVFYDETIKKVLNYINSNIDDKLSID 221 Query: 163 RIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 I+SE +S L +K + TS + + R+ A LI G+ + V CG++ Sbjct: 222 SISSEFFISKYYLMRKFKSHTGTSIHNYIVQKRLILAKSLITN-GYLMSEVCNKCGFNDY 280 Query: 222 SYFIYVFRNYYGMTPTEY 239 S F+ F+ YG++P Y Sbjct: 281 SSFVRAFKKNYGVSPKNY 298 >UniRef50_Q93SE2 Putative uncharacterized protein n=1 Tax=Escherichia coli RepID=Q93SE2_ECOLX Length = 245 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 32/233 (13%) Query: 20 TMVNGEYRYFNGGDLVFADA-------------SQIRVDKCVENFVFVSRDTLSLFLPML 66 T + G+ +F D++ D +++R+D+C+ S D + Sbjct: 15 TEIAGKKLFFQKNDVLLTDNISQSFFLRHPGNVTELRIDECIVRKYMESADRIQ------ 68 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-LSQNKNLRYAEMLRKRALIFALLSVF 125 H+ VS + I + V Q LS K L + FA LS+F Sbjct: 69 -------HSDSAVSVPFIKTTFSHIALLHNVMQNLSLQKTLPQQ---FSEQMFFACLSIF 118 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS 185 F+ LL + ++ +V +I ++ + W + I++ L MS SLLK+KL+EE+ S Sbjct: 119 STHRGFMFLLFRCIN-SVALKVRYIICSSPSRAWRVKDISNSLYMSESLLKRKLQEEKVS 177 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +SQ+L + RM A QLI S+ ++A+ CGY S YFI VFR Y+G+TP + Sbjct: 178 FSQILLDIRMHNARQLI-SSKLSVNQIAIRCGYASTPYFISVFREYFGITPHQ 229 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 6/189 (3%) Query: 59 LSLFLPMLKEEALNLHAHKKVS-SLLVHHCSRDIPVFQEVAQLSQNK-NLRYAEMLRKRA 116 L L LP++ + A L + S +LL +RD V + QL + + A L R Sbjct: 188 LYLGLPLIDQAARELLGPQSTSVALLDVSGARDETVRWLMDQLRRELLDRPQASPLYVRG 247 Query: 117 LIFAL---LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 L AL L D H N L +V V+N +A E++LA +A + +S Sbjct: 248 LAQALAVHLLRHYRDPHGGVRRSNALPAYKLRKVIGVMNERLAEEFSLAALAQVVELSEY 307 Query: 174 LLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + S SQ RM RA QL++ SI + + GY S S+F VFR Sbjct: 308 HFSRMFKRATGLSPSQYFIGLRMARARQLLLETPRSIIDIGLEVGYSSPSHFSQVFRREV 367 Query: 233 GMTPTEYQE 241 G+TP+ Y++ Sbjct: 368 GVTPSIYRQ 376 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 1/102 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ R IN N + +L ++ E+ +SP K ++E ++ + LTE R++ A + Sbjct: 428 SIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARE 487 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 L+ SIK + GY +YF +F+ Y G+TP+E++ER Sbjct: 488 LLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRER 529 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 26/244 (10%) Query: 10 IAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDK-----CVENFVFVSRDTLS--LF 62 I + T G + N G+L + ++ + D +E F S D + LF Sbjct: 50 INITIDNELFTGTGGSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLF 109 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ-----NKNLRYAEMLRKRAL 117 PM + S +++ H ++ E+ L + NK + L + L Sbjct: 110 KPM------------RSSHVILTHSLPYSEIYAEIISLLEKLIYINKYEKGFYQLDCKIL 157 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 + +LS L + + +MR + T +N+N + TL+ +A E MS + + Sbjct: 158 LLEILSNILSIPDIL-VKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSEKYISR 216 Query: 178 KLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 ++ ++S+ + R+ A L+ SI VA+S G+ +VSYFI F+ YG TP Sbjct: 217 YFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTP 276 Query: 237 TEYQ 240 Y+ Sbjct: 277 FSYR 280 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 107/239 (44%), Gaps = 21/239 (8%) Query: 4 LHGNCLIAYARHKYILTMVNGEYR-YFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 + G+ +I +R + L +N + R Y DL F + Q VD C ++ + L LF Sbjct: 63 IQGDVIIINSRDLHYLESLNNDLRFYLIRIDLPFLFSDQ--VDLCQTKYLSPLSENLILF 120 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEV-AQLSQNKNLRYAEMLRKRALIFAL 121 +++ + + + +++ + ++I V A L L + K L Sbjct: 121 KNLIRNDD---EIVRCIKTIIKEYNKKEIGYELAVKANLYNLVVLLIRNYIDKFVTKRQL 177 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 DE F +V +++N + + +++ +SP + ++ Sbjct: 178 AFKINNDERFY-------------KVFEFVHSNFNKKISTLNLSNIAHVSPYYFCRIFKQ 224 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + ++ + E R++++++L+ +I VA++CG++ V+YF +F+ YG++PT++ Sbjct: 225 ITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLFKKKYGVSPTKF 283 >UniRef50_C6PB97 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PB97_CLOTS Length = 251 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 21/240 (8%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 H + Y + + + + DL F ++Q+ K ++ S T++LF Sbjct: 29 FHRAYELIYINNGRLSVSIGKKEYILEQNDLAFIFSNQMHEFKTID----FSDITITLFS 84 Query: 64 P-MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 P ++ + +N ++L H R I F E+ + K++ ++++ Sbjct: 85 PELIGDFYMNYKGMIPDDNIL--HLDRYID-FNELNSIYS-----------KKSFLYSIC 130 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-RE 181 ++ + FIP+ Q + ++ I N ++ TL +A L L K ++ Sbjct: 131 DKLVKQKSFIPV-KQSAQTKVLYKMLLYIEQNYSNVCTLKNVAEHLNYDYPYLSKLFVQQ 189 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + ++++ L R+ +A ++ SI +A +CGY+++ F FR M+P EYQ+ Sbjct: 190 MDMTFTEYLNNYRISQACYMLKNSNLSIGEIASNCGYNNLRTFHRNFRRITNMSPKEYQK 249 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 13/167 (7%) Query: 88 SRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLED---EHFIPLLLNVLQ---- 140 + + + + + + +R + L+ ALL+ E+ + F+ ++ + Q Sbjct: 357 EEKLQLMEMLLLARRMVQDQGGAPVRDQELLSALLAAGEEETARQKFVAAMVELAQAVVI 416 Query: 141 -----PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECR 194 + TR I N + +L +A + +SP K +EE ++++ LT R Sbjct: 417 KNQEPDGIITRAQDYIRQNFRKDISLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIR 476 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ A +L+ SIK+V V GY + +YF +F+ + G+TPTE+++ Sbjct: 477 IETAKRLLSERELSIKQVCVDSGYANPNYFSRIFKKWVGITPTEFRD 523 >UniRef50_A6T768 Bacterial regulatory protein, AraC family n=48 Tax=Enterobacteriaceae RepID=A6T768_KLEP7 Length = 262 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 17/228 (7%) Query: 21 MVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRDTLSL---FLPMLKEEALNLHA 75 +V GE R +V ++ V EN +F S D LSL L K L+ Sbjct: 44 IVQGESRVLATPQQLIVLPADVELEVINQPENGLFCS-DLLSLTPELLTRFKTRYLSEPP 102 Query: 76 HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR---KRALIFALLSVFLEDEHFI 132 +++SL C+ PV E+A + Q+ E L ++ LL E + Sbjct: 103 PGRLTSL----CA---PVTTELAFMWQSVLQAVREGLSVALQQHQTMGLLLALYEAGYAG 155 Query: 133 PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTE 192 PLL+ Q ++ +V +I + A W+++R+A L + S L+++L++E S+ Q++ E Sbjct: 156 PLLVER-QQDLSAQVRQLIMLSPAQAWSVSRVAKMLFLGESTLRRRLQQESQSFRQIVEE 214 Query: 193 CRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 RM AL + I +A + GY S S F FR +YG+ P + Sbjct: 215 VRMAHALGQLQTTSRPIGEIAQNSGYQSGSRFTARFRQHYGLLPKHVR 262 >UniRef50_A7XY51 LngS n=3 Tax=Enterobacteriaceae RepID=A7XY51_ECOLX Length = 298 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 13/246 (5%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLK- 67 L+ +T G + L+ + +Q+ E +S D L + +L Sbjct: 49 LVCLHHGHVTITDERGRTIHCVAPGLMVLERNQLINITMQEVDGHLSFDVLDIPHELLTI 108 Query: 68 ------EEALNLHAHKKVSSLLVH--HCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL-- 117 E+ H + +V+ + VF + + E K + Sbjct: 109 AHELLIEKLQTEHQPGEHPFRIVYSNDFAARKEVFDLLRFTLSQEKKGIFENEEKENIAT 168 Query: 118 --IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 + LLS F+ D F ++ + +++ +V ++ +W L ++S + MS S L Sbjct: 169 YALLLLLSGFIHDTAFAGIISRSAKLSVKYKVYNLLYTEPDKQWKLDDVSSAIFMSASTL 228 Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 K+KL E T++S+L RM A +L+ +S+ VAV CGY SVSYFI F+ + +T Sbjct: 229 KRKLATEGTTFSELYITARMNLASKLLRTGKYSVTNVAVLCGYDSVSYFIACFKRQFNIT 288 Query: 236 PTEYQE 241 P+ + + Sbjct: 289 PSAFMK 294 >UniRef50_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibrio parahaemolyticus RepID=A6B6J4_VIBPA Length = 241 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 20/232 (8%) Query: 11 AYARHKYILTM-VNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEE 69 + RH +I+++ +G + N V + + K + F F S + S+ + + Sbjct: 17 IFTRHNHIVSVDGDGILSFQNNITKVKPNEAIFIPSKVMVRFSFNSNENKSIKVSLYHIN 76 Query: 70 ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129 +NL+ + + L I + EV +L+ L R I L+ LE Sbjct: 77 GINLNCKQDKVTSL-------INAYIEVEKLN----------LTNRETIIELIGSRLEKI 119 Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQL 189 +L N + ++ +++ ++ +W+L + S S L +KL++ +TS Q+ Sbjct: 120 KNNRVLYNY--DPLEKKIYRLVSKDLKKKWSLEEVCKLTYTSKSTLNRKLKDNQTSMGQI 177 Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ R+ A LI S+ +++ G++S SYF F+ +G +P +Y++ Sbjct: 178 ISNARLDYATILITNTSLSVDEISMLSGFNSTSYFCKKFKESHGFSPKQYRK 229 >UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein n=10 Tax=Vibrio RepID=Q7MEL5_VIBVY Length = 275 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 11/250 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 + N L + +T +G G+ ++ Q++ + S L Sbjct: 26 PVTKNGLFFVEQGSLTVTQDSGATSELTAGEFALYNSGQLKEAQAQPGENGFSALALVFS 85 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR------A 116 + +L ++ N++ K+ + + ++ Q K++ E+ RK+ Sbjct: 86 ITLL-QKFRNVYPLSKIPA---QQTDTFFKFSGQHKRIDQLKDMLIEEVERKQNSQAQEH 141 Query: 117 LIFALLSVFLEDE-HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 L AL+++ +E + + +++ Q + ++ I +NI E +L +A + MS + L Sbjct: 142 LALALMALMVEKQPELLNMIIRATQFSETQKIIQFIESNIEEEISLETLAKHMGMSTATL 201 Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 K++L EE S+SQLL R+ A + + SI +A G+ S ++F F+ MT Sbjct: 202 KRRLAAEEMSFSQLLKIKRISHAATQLRVTDKSITTIAYESGFKSAAHFSTAFKAVQQMT 261 Query: 236 PTEYQERSAQ 245 P E++ + Q Sbjct: 262 PKEFRAKVQQ 271 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 95/253 (37%), Gaps = 16/253 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + V+ + G+ +F ++ ++ V S D + Sbjct: 38 HDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVV-GGKPCSFDAVVFHSS 96 Query: 65 MLKEEALNLHAHKKVSSLL------VHHCSRDIPVFQEVAQLSQN-----KNLRYAEMLR 113 + +++ + +S +L H R+ E+ + +N + A L Sbjct: 97 LFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASELT 156 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLM 170 + L+F++L+ + + + R V I N A L ++A M Sbjct: 157 IKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARM 216 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S + + S + + R+Q+A + I VA+ G++S+SYF VFR Sbjct: 217 SESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFR 276 Query: 230 NYYGMTPTEYQER 242 +G TP EY+ R Sbjct: 277 QRFGCTPREYRSR 289 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 14/274 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN-----FVFVSRDTL 59 H I I ++ + G++ +I + +EN + ++ + Sbjct: 29 HDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQIIQINYKFM 88 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 P L + + + ++ S + E+ +N Y + I+ Sbjct: 89 ETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGY--EFHVISAIY 146 Query: 120 ALLSVFLEDEHFIPLLLNVLQPN-----MRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + + + + + L+ N ++ I N +E + +A L ++ Sbjct: 147 KVFGSIISNVPYTISTEDELEKNNITFNRMKKIIEYIEQNYMNEININTLAEILHLNKYY 206 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + ++ S Q +T RM +A +L++ + SI + +SCG+ ++ YF VFR Y Sbjct: 207 IAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKVFREVYK 266 Query: 234 MTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDR 267 +P EY + + Q SN+ S V QG Y T++ Sbjct: 267 CSPLEY-KNNRQERSNKKVHESEVYQGYIYYTNK 299 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 10/245 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD------KCVENFVFVSRDT 58 H I Y +N + Y GD+ ++ + ++ SRDT Sbjct: 38 HSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSRDT 97 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKRAL 117 ++ FL + EA + ++ + + ++ + + ++ Sbjct: 98 VTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLLHQ 157 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 I +L E L + R +N + TL ++A+ MSP+ K Sbjct: 158 ILVVLGRCQEARREGHALEEAEEA--MVRAARYMNQHYQEGVTLGQVAAFANMSPTYFSK 215 Query: 178 KLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 K + + + L R+Q+A ++ S+ VA++CG+ +YF VFR G++P Sbjct: 216 KFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSP 275 Query: 237 TEYQE 241 EY++ Sbjct: 276 REYRK 280 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETS 185 E E I + PNM R+ I ++ A TL +A + + S L Sbjct: 400 EAERAIGETNTSVNPNM-DRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEG 458 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 +S+ L + R+++A++L++ +I ++ S GY SYF VF+ G++P++++ ++A+ Sbjct: 459 FSEYLNKIRLEKAMELLLTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQNAR 518 Query: 246 R 246 Sbjct: 519 E 519 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 I +L+ F++D N V I+ N ++ TL +A + S S L K Sbjct: 118 IVDILNEFIKDNKKRIEESNKNCTEEFQEVVEYIDKNFKNDITLKDVADHVNFSSSYLSK 177 Query: 178 KLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 ++E ++++ +T+ R+ +A ++++ SI +A S GY+ +YF VF+ MTP Sbjct: 178 LFKKEMGINFNRYITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCKVFKKIVNMTP 237 Query: 237 TEYQERSA 244 +EY+ S Sbjct: 238 SEYRTNSR 245 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 12/245 (4%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD----KCVENFVFVSR 56 +Q H C I Y ++ G+ GDLV + + + K +F++ Sbjct: 36 IQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLA- 94 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 +P L L+ + +V S + DI +E+ Q + ++ Y E+ + Sbjct: 95 -IRDFAVPGLPAGCLSQEKY-RVLSCGEYRYKMDI-YLRELLQETSSQIEFYQEI--SQG 149 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L+ ALL + + P L ++ ++ N TL ++ + +S L Sbjct: 150 LVSALLVLVMRLIRINPEDEAALSQEC-QKIKEYLDQNFTSPITLDSLSETVYISKHYLS 208 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 +E S + LT RM++A +L+ + V+ + GY + YF VF+ YG++ Sbjct: 209 HLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGIS 268 Query: 236 PTEYQ 240 P +Y+ Sbjct: 269 PVKYR 273 >UniRef50_B6EKX1 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EKX1_ALISL Length = 259 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 103/236 (43%), Gaps = 11/236 (4%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP-- 64 C+I +++ +Y NG ++ S++ + N +F S+ + P Sbjct: 23 PCIIWVLSGMKNISLGRYKYNLKNGDAILLGANSKLNFENIPINGLFFSKQIIFFKPPKV 82 Query: 65 -MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 K+ N K + L + + + + + +N N R+ + L Sbjct: 83 EFFKQTVKNFEVSKYRNIKLDYQLKMTLDLLHQSDVILKNINTRH--------MWLDGLY 134 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 + L +E+++ +L + + +V V+ + + + S L +S + L ++L++ Sbjct: 135 LLLAEEYYLQVLFLSSEGSFNEKVYEVLEKMQPSDHKIENVCSILGVSKATLIRRLKKAG 194 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 T + +++ + RM +AL L+ ++ ++ SCGY SV + F+ +G+TP EY Sbjct: 195 TQFKKIVRQVRMNKALFLMQKRELLLEDISFSCGYQSVELLVVYFKEEFGITPKEY 250 >UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYL2_9BACL Length = 530 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 1/107 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRA 198 +P++ + +I N ++ L++IA + + S L + + S+ Q LT+ RM +A Sbjct: 423 EPSIVEAMKEMIELNYMNDLNLSQIAEQYHYNLSYLSDLFKTKTGKSFLQYLTDVRMNKA 482 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 +QL+ S+ +A G+ + SYF F+ +G++P+EY+++ Sbjct: 483 VQLLDETPLSLSDIAELTGFSNASYFSTKFKKVFGISPSEYRQKDKN 529 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 105/243 (43%), Gaps = 9/243 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ N ++ + ++G GD+ ++ + + L+ Sbjct: 47 TVRDNYVLHFIVDGKGKFTIDGITTQLKTGDMFILPKGKVAFYQADGEHPWT-----YLW 101 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR--ALIFA 120 + +A N+ + ++ H + + V ++ +L+Q ++ + ++ + A ++ Sbjct: 102 VGFSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDDVTELQLTAELYK 161 Query: 121 LLSVFLEDEHFIPLL-LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 LL+ +++ + ++L N +V +I+ + ++ IA +L ++ S L K Sbjct: 162 LLAFLMKEFPSKAMSDSSILIQNYIKQVKKIIHTQYGNPLKISEIAKKLNLNRSYLYKIF 221 Query: 180 REEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +EE S L + RM+++ L+ F I +A + G+ F F+ ++G +P+ Sbjct: 222 KEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSKAFKKHFGQSPSH 281 Query: 239 YQE 241 Y++ Sbjct: 282 YRK 284 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 6/184 (3%) Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR---AL 117 ++ M+ E ++ K ++ R++ + E +N+ L E+L+ + Sbjct: 343 IYEWMVFEYQEDIDKIKAKLIEIIGVIKRNLSYYAEDENFIENREL--EEILKINDVDKI 400 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 F ++ I + ++ I +N + TL +A E+ MS K Sbjct: 401 KFIFINTLKNLFENIKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSK 460 Query: 178 KLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 + + ++ LT R+ +A +L+ SIK V GY +YF +F+ GMTP Sbjct: 461 FFKDQTGKNFIDYLTNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTP 520 Query: 237 TEYQ 240 TEY+ Sbjct: 521 TEYR 524 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 11/225 (4%) Query: 26 YRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL---PMLKEEALNLHAHKKVSSL 82 + + GD++F D+ + + ++ + S +S F E L+A + Sbjct: 26 HYLASPGDVLFFDSGILHDETTIDGDLATSCLGVSDFQLPGRRANEMVGRLYAPQLS--- 82 Query: 83 LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN 142 L +F QL+ + A++ L H P Q + Sbjct: 83 LDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILCKLDEELA--RHGQPPRPQ--QES 138 Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQL 201 + V I+ + TL IA+EL +P L RE S Q + R+ A L Sbjct: 139 LGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHIGYSPMQYIIRRRIGEAQNL 198 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 ++ SI +A SCGY++ +YF VF+ GMTP +Y+ Q Sbjct: 199 LIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRRDWVQN 243 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 + FLE+ + + N+ RV IN N E L ++ + ++P + ++E Sbjct: 406 TSFLEEISDLFAGAKRNENNIVERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKE 465 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +Y++ LT R++ A + + +I +A GY +YF VF+ G++P+E+++ Sbjct: 466 VGCTYAEYLTRIRIEAAKKYLANPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 9/151 (5%) Query: 94 FQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINN 153 +++V +LS + K L+ + V N +M + I Sbjct: 383 YRQVPELSDYHDSAVLFEQGKNHLLRIVRHV--------QAWRNSHAKDMLYKAKEYIEA 434 Query: 154 NIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRV 212 + A TL A + +SP K ++ ++ +T+ R+++A + S+K + Sbjct: 435 HYAEALTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIRKAKHFLKEGSLSLKEI 494 Query: 213 AVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 S GY +YF VF+ + G++PTEY++ S Sbjct: 495 CYSIGYKDPNYFSRVFKKHTGLSPTEYRKES 525 >UniRef50_B7LQH4 GadW HTH-type(AraC-type) transcriptional positive regulator of gadA and gadBC, in absence of gadX; repressor of gadX n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH4_ESCF3 Length = 245 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 1/131 (0%) Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 L F+ LS+F + +PLL N + + +V +I+ + + W L +A +L S S Sbjct: 109 SNMLYFSCLSLFSMHDELVPLLFNSIN-TLSGKVERIISVDTSRRWYLRDVAEKLYTSES 167 Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L+KKKL++E TS+S++L RM RA L+ ++ + +A CGY S SYFI FR YYG Sbjct: 168 LIKKKLQDENTSFSKILLASRMARAKTLLELNQMPLTVIAEKCGYSSTSYFINTFRQYYG 227 Query: 234 MTPTEYQERSA 244 +TP +Y RSA Sbjct: 228 VTPHQYSHRSA 238 >UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3F6_ERYRH Length = 395 Score = 129 bits (325), Expect = 9e-29, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 8/243 (3%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + Y + T + G +++ Q + S T+ + Sbjct: 147 HNYWELTYVDAGVLTTEIEGTSFTLENQEMILYFPGQFHTQSVLGENA-CSYLTIMFDMN 205 Query: 65 MLKEEALNLHAHKKVSS----LLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 ML + ++ L++H R + ++ Q K+L + + L+F Sbjct: 206 MLPQSIEHIQNRVMSCGNELYTLMNHFIRQSTILEQ-EQSPFAKDLMVSYLQEIMILLFQ 264 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 P+ +N + M + T I NI ++ I ++ +S S L+ Sbjct: 265 YDEPSSSHNTSNPIQVNF-ENEMMDEIYTYIQANIHRPLSVEDICNQFAISRSALQLLFN 323 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + + Q + E +++RA LI+ + I VA+ G+ S+ YF F+ ++G P+EY Sbjct: 324 KYFDMPPKQYINEQKLERAKHLILEGKYPITDVALKLGFSSIHYFSRKFKQHFGFAPSEY 383 Query: 240 QER 242 ++ Sbjct: 384 AQK 386 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 7/244 (2%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + +N R GD++ ++ + + +SL Sbjct: 38 HEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPYDCVYECLVFPVSLLSS 97 Query: 65 M-LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL-SQNKNLRYAEMLRKRALIFALL 122 E LN + + D + + +L + ++ L+ L++ + Sbjct: 98 QTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFM 157 Query: 123 SVFLEDEHFIPL----LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 + L+D + L + V I + + TL +A MS Sbjct: 158 GLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHF 217 Query: 179 LRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 E + + R++RA L+ G SI +A+ CG++ VSYF F+ Y G++P Sbjct: 218 FSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPG 277 Query: 238 EYQE 241 +Y + Sbjct: 278 QYLK 281 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 5/236 (2%) Query: 16 KYILTMVNGEYRYFNGGDLVFADASQ--IRVDKCVENFVFVSRDTLSLFLPMLKEEALNL 73 + ++ G+ + F + Q I V + +++ F E Sbjct: 36 YILHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADAKNPWKYFWIGFDGEGAEK 95 Query: 74 HAHKK--VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHF 131 + + + + + +F + ++ + KNL AE L+ + L + S+ +E+ Sbjct: 96 YLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKLQGLFYEFFSLIVEENSI 155 Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLL 190 ++ T I NN + + I + ++ S L ++ + + L Sbjct: 156 EEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSYLSTLFKKNMGITIQEYL 215 Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 T R+ RA +L+ I SI+ VA SCGY F ++ YG+TPT+++++ + Sbjct: 216 TVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYGVTPTQHRKKDRKE 271 >UniRef50_P32326 Urease operon transcriptional activator n=12 Tax=Gammaproteobacteria RepID=URER_ECOLX Length = 296 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 87/190 (45%) Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 + L L L + L +H+ + + RD + + ++ +L K++L Sbjct: 85 VFLLLKTLMKSGAPLTSHQPIYHISPPETVRDNFSLLKQCLPLKKQSASQEALLMKQSLY 144 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 F L++++ E + L + +I +W L +A L +PS L++ Sbjct: 145 FILMAIYQEGIDILNLFRFNYDEPKNQAITHLITQEPQKKWHLDDVAKALFTTPSTLRRH 204 Query: 179 LREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L E S+ QLL + RM AL + +S+ +++ CG+ S +YF VF+ Y MTP++ Sbjct: 205 LNREGVSFRQLLLDVRMGMALNYLTFSNYSVFQISHRCGFGSNAYFCDVFKRKYNMTPSQ 264 Query: 239 YQERSAQRLS 248 ++ +S Q Sbjct: 265 FRLQSRQSND 274 >UniRef50_P63202 HTH-type transcriptional regulator gadW n=57 Tax=Enterobacteriaceae RepID=GADW_ECO57 Length = 242 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 14/212 (6%) Query: 46 KCVENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQE 96 ++F F S DT L +L +++ NL H K L+ ++ P+ Sbjct: 36 NLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLI----NQSPPMPLV 91 Query: 97 VAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIA 156 A + L + LS+F + IPLL N + + +V +I+ +IA Sbjct: 92 TAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSI-STVSGKVERLISFDIA 150 Query: 157 HEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 W L IA + S SL+KKKL++E T +S++L RM A +L+ + + +A C Sbjct: 151 KRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKC 210 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 GY S SYFI FR YYG+TP ++ + S S Sbjct: 211 GYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS 242 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 12/249 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + Y + +N Y GD++F +I + R T+S Sbjct: 22 HTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSS-PVNERVTISFDGE 80 Query: 65 MLKEEALNLHAHKKV-----SSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKRALI 118 L L + V +S + V + + ++ + + L K+ Sbjct: 81 YLDS-MKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLMKKGCF 139 Query: 119 FALLSVFL--EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + LL ++ L + + + I ++ + TL +A MSP+ Sbjct: 140 YELLVSLSRCQEAETDHGRLEIGEETIEA-AAKYIYDHYQNPITLEEVAELSHMSPAYFS 198 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 +K + Y + LT R++ A +L++ S+ +A CG+ +YF FR G++ Sbjct: 199 RKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKAKGVS 258 Query: 236 PTEYQERSA 244 P +++ Sbjct: 259 PRAFRKMQG 267 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ +V + N ++ TL +A + ++P K ++E ++ +T R+++A Q Sbjct: 322 SVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQTFIDYVTHLRIEKAKQ 381 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 L+ G ++K GY +YF VF+ MTPTEY++ +R Sbjct: 382 LMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQDVCER 427 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 19/252 (7%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H C I Y R Y ++G + G + +N D L + Sbjct: 38 HNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPKDN---CRYDCLVFDMA 94 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA-------- 116 L + + H + +++H R I F ++ +++ ML K Sbjct: 95 ALLKSSQICTLHLQ---PIINHERRFITFFSADSEPAKDAKAVIDAMLEKEPGYEFTVPG 151 Query: 117 -LIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLMSP 172 L+ L + EH+ R V + I N TL +A+E M+ Sbjct: 152 RLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNITLEELANECGMNR 211 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + +E + + L R++ A +LI + +A+ CG++ SYFI VF++ Sbjct: 212 NYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFNDYSYFIKVFKSM 271 Query: 232 YGMTPTEYQERS 243 G+TP +Y RS Sbjct: 272 KGVTPRDYCRRS 283 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN--FVFVSRDTLSLFLP 64 + ++Y + +IL +GE G + ++ Q+ + + +S + Sbjct: 38 DYTVSYNKLYFIL---DGEGWVKIGDEELYPVPGQLVLMPARTRQSYSVISGRPYLKYWS 94 Query: 65 MLKEEALNLHAHKKVSSLLVHHC-----SRDIP-VFQEVAQLSQNKNLRYAEMLRKRALI 118 + S L V HC + ++P +FQ++ +++ A LR+++++ Sbjct: 95 HFSATVGDSDV---FSWLNVPHCYDLSGNAEMPALFQQLV--DAHRSDTLAARLREKSVM 149 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 +LS E + + +V I N++ E TL ++A L + P+ K Sbjct: 150 LDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIKY 209 Query: 179 LREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + + + L+ RM++A ++ SIK +A + G+ S +YF FR G +P+ Sbjct: 210 FKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSPS 269 Query: 238 EYQER 242 EY+ Sbjct: 270 EYRNN 274 >UniRef50_C6LB63 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB63_9FIRM Length = 517 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%) Query: 90 DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149 D + +E+ Q + +R + L+ + LE I + ++ Sbjct: 360 DSMMSEEMKQKTDESLMRIYQSQTLERLLRFVYGFLLEIGKNINFQKEIRGVDVLEHCRE 419 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFS 208 + + E T+ IA + + S + S+S +TE RMQ+A + ++ + Sbjct: 420 YLEKHYMDEITMEMIAEKYYFNASYFSTVFKNYFGKSFSGYMTELRMQKAKEFLISTDWK 479 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 IK +A GY +YFI F+ +YG TP EY++ SAQ Sbjct: 480 IKEIASKTGYRDANYFIRAFKKFYGYTPEEYRKLSAQ 516 >UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vibrio RepID=D0MC89_VIBSE Length = 269 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 5/224 (2%) Query: 23 NGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSL 82 NGE GD +++ + + + + L +F P L + H + + Sbjct: 41 NGEQFELKAGDFTLYNSADLSSAEAIPSEKGFKALAL-VFNPNLFCDFKKAHPMLRSKTE 99 Query: 83 LVHHCSRDIPVFQEVAQLSQ---NKNLRYAEMLRKRALIFALLSVFLE-DEHFIPLLLNV 138 EVAQL N R A + + ALLS+ +E + + + ++ + Sbjct: 100 ERRFYPFSAQASSEVAQLKDTLVNLASRNAPDYTQGHIAMALLSLMVEVEPNILSIIDDA 159 Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 + + I NNI + TL +A+ + MS + LK++L E+ S+SQ+L R+ A Sbjct: 160 SSLSDSQKAIKYIENNIEKDITLEGLAAHMSMSIATLKRRLAAEDLSFSQILKVKRINFA 219 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + + SI +A G+ S ++F F++ Y MTP +++ + Sbjct: 220 ATQLRMSEKSITEIAFESGFKSAAHFSTAFKSVYNMTPKDFRNQ 263 >UniRef50_A7LR14 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LR14_BACOV Length = 1334 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92 DL+ I + K V++ V S + + + EE++ + + L P Sbjct: 1122 DLIMPQIGGIELCKKVKSNVKTSCVPVIVLTSLTDEESMAMCMNSGADRFLTK------P 1175 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 V EV + S + + E+++ R + A + + L+ + RV I Sbjct: 1176 VSLEVLKGSITQAISTREIIKNRLQMDA-------ECKYEETTLDSYNDKLVLRVVDAIK 1228 Query: 153 NNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIK 210 NI + E+T+ ++ ++ +S L +KL+E S L+ R+++A L+ H +I Sbjct: 1229 KNIENSEYTVYELSRDIGLSRVHLNRKLKECMNISPVNLIKSIRLKQAAYLLAKHEVNIS 1288 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVA 258 VA G+ S SYF F Y+ MTP E+ SA S+ + A I+ Sbjct: 1289 EVAYKVGFKSHSYFTNSFHEYFKMTPKEF--MSAYSDSSDEELAHIIQ 1334 >UniRef50_C2L0L9 Response regulator receiver protein n=2 Tax=Lachnospiraceae RepID=C2L0L9_9FIRM Length = 541 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 101/216 (46%), Gaps = 22/216 (10%) Query: 39 ASQIRVDKCVENFVFVSR---DTLSLFLPMLKEEALNLHAH---KKVSSLLVHHCSRDIP 92 +S+ +DKC++ ++ SR +L + L + N+H +V + L+ D Sbjct: 337 SSEEELDKCIDLYIENSRLDSPSLQEYHFFLMDLVTNMHKFLLANQVDTGLIFPKEED-- 394 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 V+Q+V Q S AE+ + I + + +++ + + + + ++ Sbjct: 395 VYQKVQQFS------LAELSQWMKEICKKMQIIIQE------MRSDKTKSFVKKAVEHVH 442 Query: 153 NNI-AHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIK 210 ++ + T+ ++ EL +S + + E S+ LT+ RM++AL+L++ Sbjct: 443 SHYMDKDLTVEALSQELHVSAAYFSTIFKRETGKSFINYLTDYRMEKALRLLMEEEEKTY 502 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 +A + GY +YF Y F+ +GM+P++Y+ S + Sbjct: 503 IIAEAVGYSDPNYFSYAFKKKFGMSPSKYKSNSKGK 538 >UniRef50_C8WRN2 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRN2_ALIAD Length = 274 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 12/243 (4%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQ-----IRVDKCVENFVFVSRDTLSLF 62 L + + +G + GDL+ A + I D+ +S D Sbjct: 38 YLFRLQLDGHAVVTTSGASMVVSAGDLLLFPAGEPYELRIEPDEGDRPGEHLSTDLYLFC 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 ++ N K+ L +H + ++++ + + E+ L+ AL Sbjct: 98 NGPWVDKWWNHRPRKRHLRLALHENCVYL--WRQLIEEYRRPGKPDEELC--DYLLRALC 153 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE- 181 F D++ P R+ I + A + +L+ IA + +S S + +E Sbjct: 154 LTF--DKYGYDPKRATPVPIAAERIRAYIERHAAEDLSLSDIADAVGLSVSRVVHIFKEA 211 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + Q L R+Q A + +++ +A CG+HS SYF VFR YG++P E+++ Sbjct: 212 YGQTVVQYLQNVRLQMACDRMRFSNLNLEEIADRCGFHSYSYFYRVFRQKYGISPREFRQ 271 Query: 242 RSA 244 R+ Sbjct: 272 RAT 274 >UniRef50_A6AXU3 Transcriptional regulator, AraC family protein n=3 Tax=Vibrio parahaemolyticus RepID=A6AXU3_VIBPA Length = 238 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 3/142 (2%) Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164 N E+L +++ LL F + ++ +R+ +I+ ++ WTL I Sbjct: 98 NRSNDELLDINSMLLYLLMHFEQSASQAETRSYS---SLSSRIRALISKDLTKPWTLKEI 154 Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 A + MS S +K+KL +E T+++ +L R+ A +++ S+ +A CG+ SYF Sbjct: 155 AKLVYMSESTVKRKLNKEGTTFTDVLQAARLDTAQKMVCNSDASVSAIAELCGFKHASYF 214 Query: 225 IYVFRNYYGMTPTEYQERSAQR 246 FR YG TP Y++++ R Sbjct: 215 GACFRKEYGATPLAYRKQAQLR 236 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 86/239 (35%), Gaps = 9/239 (3%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI + V G GDL A +Q+ E + ++ Sbjct: 39 VRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPWE-----YYWV 93 Query: 64 PMLKEEALNLHAHKKVSSL-LVHHCSRDIPVFQEVAQLSQNKN-LRYAEMLRKRALIFAL 121 A L S L VHHC V + + + ++ E L L + Sbjct: 94 GFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCEALMTGYLYIFM 153 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-R 180 + E +P + + + + I N +H+ ++ IA + +S S L + Sbjct: 154 AHLMKEARDAMPNVGSSSSQYVLS-AIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMA 212 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S LT R+ A L+ SI +AVS G+ YF VF+ G+ P++Y Sbjct: 213 NVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 89/245 (36%), Gaps = 8/245 (3%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE--NFVFVSRDTLSLF 62 H + H + G + + +++ ++ + +F +++ Sbjct: 36 HNAVEVIIPLHNGFTVVSGGVEYHLSEKEIIVIPPGELHSMPAQDGRRIIFQCDNSVISE 95 Query: 63 LPMLKEEALNLHAHKKVSSLL-----VHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 +P L+ + ++ L V + ++ E + ++R L Sbjct: 96 VPSLESILPVFSSAVHITPSLNKELYVLARKNILDIYTEYYSKAPMADVRIYMYLITILT 155 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 + DE+ N + V IN N +E L ++AS S + Sbjct: 156 AIREFQLNSADENSASAAENSDESRKFGLVTKYINQNYMYELPLEKLASIAGYSKYHFSR 215 Query: 178 KLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 ++ SY Q + R++ A +L+ I VA+ CG+ S++ F FR G TP Sbjct: 216 IFKKYNNMSYIQYINSKRIKAAERLMADSSLPITEVAMQCGFSSLTTFNRAFRKAKGCTP 275 Query: 237 TEYQE 241 TE+++ Sbjct: 276 TEFRK 280 >UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4P0_BREBN Length = 515 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 109/242 (45%), Gaps = 13/242 (5%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADAS-QIRVDKCVENFVFVSRDTLSLFLPMLK 67 ++ Y V+G+ + + G L+ + +I +C + + + + Sbjct: 23 VLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTTKIEELRCQSGPLHI---YRLHYAEARR 79 Query: 68 EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV-FL 126 ++ + K+V +L V + + V +E++QL++ ++ Y+ LR +AL++ LL V + Sbjct: 80 DQHESAPERKEVEALAVSTPASFLTVLEELSQLTRKRD--YSSFLRSQALLYELLGVVYD 137 Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETS 185 E + + ++ + + + L + S ++PS + + + Sbjct: 138 EQKKKEEKGIGTIEETI-----AYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMT 192 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + LT RM+ A +L+ G S+K VA + GY YF +F+ G++P Y ++S Q Sbjct: 193 PGEYLTGLRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQ 252 Query: 246 RL 247 R+ Sbjct: 253 RV 254 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 6/127 (4%) Query: 129 EHFIPLLLNVLQ-----PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EE 182 H + L+ + P++ + T I+ ++A E + IAS + ++P L + + E Sbjct: 408 RHIVGKSLDYMNSLEHSPSVVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRET 467 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 S S L + R++ A +L+ ++ VA GY + S+F +F+ Y G+ P EY++ Sbjct: 468 GMSISDYLLQQRLRIAAELLANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQS 527 Query: 243 SAQRLSN 249 R S+ Sbjct: 528 QESRQSD 534 >UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK40_BACSK Length = 407 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 + + RV + + + +L +A L ++ + L K+ +EE +S + RM RA Sbjct: 304 KEQLAVRVYEYVEAHFFEQPSLQEVADHLFLNAAYLSKRFKEETGEKFSDYIHRLRMDRA 363 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 ++L+ + ++A GY SYFI VF+ + MTP E++ R Sbjct: 364 VELLAETNMKVSQIAKKLGYKDASYFIKVFKREFHMTPQEFRSR 407 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 17/256 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV------------DKCVENFV 52 H I Y + ++ ++GE GD + ++ Sbjct: 37 HDEFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYI 96 Query: 53 FVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 D + + ++ L V + C + I +++ A+ S+ + ++ Sbjct: 97 SFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYE--AKKSERELNITTQIK 154 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 K L+ +L ++ ++ FI + + + + I N + +L + +S Sbjct: 155 TKIILLQFILEMW--EKGFIVENNTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSE 212 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + +E + SQ + R++ A QL+ S+ A+ GY ++SYFI F+ Sbjct: 213 KYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKT 272 Query: 232 YGMTPTEYQERSAQRL 247 YG++P +Y+++ + Sbjct: 273 YGVSPLKYRKKQVDCM 288 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 9/166 (5%) Query: 86 HCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE----HFIPLLLNVLQP 141 H +F+E+ +L QN+ Y +R++A++ ++++FL F+P L ++ Sbjct: 120 HTDSLTKLFRELVELYQNR--SYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIER 177 Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ I N++ TL ++A + + P+ L + + + L RMQ+A Sbjct: 178 --LKQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKS 235 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 L+ +IK +A G+ ++F FR +PTEY+ R+ + Sbjct: 236 LLGTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHRAGRN 281 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 7/152 (4%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 +F+E Q L E R+ + ++ V E ++ L N + +I Sbjct: 217 LFKETDPWRQISELSTKEKFRE--WMRNIIEVVCE---YVSLTKNSKNRKLIDEAIKLIQ 271 Query: 153 NNIAH-EWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIK 210 N + +L IA +L ++P+ L + E ++S LT CR+++A +L+ I Sbjct: 272 ENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAKELLKDVKVKIY 331 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 VA + GY YF VF+N G TP EY+E+ Sbjct: 332 EVAEAVGYTDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 13/250 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + I + + V+ E G+ V Q+ + + + Sbjct: 86 HEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAM-EYENIIFLPS 144 Query: 65 MLKEEALNLHAHKKVSS---------LLVHHCSRDIPVFQEVAQLSQNK--NLRYAEMLR 113 ML +L + + L + D F E + YA + Sbjct: 145 MLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLCGKKNYAYQMG 204 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + +F L + R+ + + + T+ A S S Sbjct: 205 VKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELCFYSNS 264 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 K ++ + Q L E R+++A +++ + VA CG+ ++SYF +FR Y Sbjct: 265 HFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKY 324 Query: 233 GMTPTEYQER 242 G TP EY++ Sbjct: 325 GKTPGEYRKN 334 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 96/250 (38%), Gaps = 11/250 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC-----VENFVFVSRDT 58 +H I Y + ++ F GDLV + + E V R+ Sbjct: 29 VHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISFRNE 88 Query: 59 LSLFLP-MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 + ++ +E + V ++ + + ++ + + + ++ Sbjct: 89 ATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKVG-- 146 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 + LL + +++ ++ + + + V T I + A +L +A + +S S L Sbjct: 147 LIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYL 206 Query: 176 KKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 KK + + + + R+Q A L++ SI +A CG++ +YF FR G+ Sbjct: 207 SKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGI 266 Query: 235 TPTEYQERSA 244 +P +Y++ Sbjct: 267 SPHKYRKNET 276 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 4/154 (2%) Query: 89 RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVC 148 D ++A S + L + R I L + + ++ R Sbjct: 387 ADPEAVSDLALASSTEFLTLDNLADMRERILERLMALVAQ---VAETREQRNSSLIDRAS 443 Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGF 207 I N + + TL +A ++ +SP K ++ + ++ LT+ R++ A +L++ Sbjct: 444 KYIEANFSQDLTLEEVARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKL 503 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + +A GY YF VF+ G TP+ +++ Sbjct: 504 PVAEIATRVGYRDARYFGQVFKKQEGYTPSVFRK 537 >UniRef50_C6D5X4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5X4_PAESJ Length = 533 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 9/159 (5%) Query: 91 IPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH-----FIPLLLNVLQPNMRT 145 I + ++ + AE L K + F L E H +I L + R Sbjct: 374 IDMRLKLHAMLFASQTLTAEKLHKEIVYFDSLWGLFEWFHTQLQSYIAAREEALPVSKRR 433 Query: 146 RV---CTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQL 201 V ++ N+ +L +A+ L M+PS + ++E ++ + +T+ +++RA +L Sbjct: 434 EVSEARKYVSMNLGKRISLEEVAAHLHMNPSYFSRFFKKETGLTFIEYVTDQKIERAKEL 493 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + + + + GY + SYFI F+ G+TPTEY+ Sbjct: 494 LDQTNYYVSEICEMLGYDNQSYFIKTFKAQTGLTPTEYR 532 >UniRef50_Q0VN05 Transcriptional regulator, AraC family n=2 Tax=Alcanivorax RepID=Q0VN05_ALCBS Length = 342 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 56/100 (56%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202 M R+ + + ++ A +L +A L +S LK+ L++ SY QL E R Q+A +L+ Sbjct: 242 MARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRLL 301 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 V SI VA GY+ V+ F F+ + GMTP+ Y+E+ Sbjct: 302 VQSENSISEVAYRLGYNDVANFSKAFKRWSGMTPSAYREK 341 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 94/251 (37%), Gaps = 13/251 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN----FVFVSRDTLS 60 H I Y +L ++ EY G+ +F D + N F + D Sbjct: 41 HKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGM 100 Query: 61 LFLPMLK--EEALNLHAHKKVSSLL----VHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 L +E + + ++ ++ R + +E+ LS++K Y ++ Sbjct: 101 LASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKG 160 Query: 115 RA--LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 ++F S ++ + +V I ++ L+ +A + MS Sbjct: 161 HLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSE 220 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + + + R+++A +L+ I +A+ G+ +SYF+ VFR Sbjct: 221 GQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKI 280 Query: 232 YGMTPTEYQER 242 TP+EY+++ Sbjct: 281 MNCTPSEYRKK 291 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 15/250 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN------FVFVSRDT 58 H + + + + L V GD+ + + E + + Sbjct: 39 HESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFEPEL 98 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-----EMLR 113 L + E+ L L SL V D+ Q A L + ++ A E+L Sbjct: 99 LGGAEDLCAEKYL-LPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYELLV 157 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 K AL+ L + + + V ++ + A +A A S S Sbjct: 158 KGALLRFLALLIAQGRQCLST--ETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSAS 215 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + R+ S+ L E R+ A + + ++ +A CG+ ++SYF F+ ++ Sbjct: 216 HFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAHF 275 Query: 233 GMTPTEYQER 242 GMTP +Y+++ Sbjct: 276 GMTPRDYRKK 285 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 15/250 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H I Y V+G N G+ +F ++ I +E + L Sbjct: 41 HNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIH--SGLEMIKRSIGYAIVFDLR 98 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ------LSQNKNLRYAEMLRKRALI 118 +L E + H+ L+ + E + + K Y L ++L+ Sbjct: 99 LLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKSLL 158 Query: 119 FALL----SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 F + + E + L ++ V IN N +L ++ ++ MS Sbjct: 159 FDIFWRVFKYYAERRNQDGRLGYKIER--IKDVLNYINQNYNKNLSLDELSRQVDMSKFY 216 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L + +E S + + + R+ +A++L++ S+ +A CG+ ++SYFI VF+ Y Sbjct: 217 LCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMH 276 Query: 234 MTPTEYQERS 243 TP ++++++ Sbjct: 277 TTPLKFRKQN 286 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 5/137 (3%) Query: 113 RKRALIFALLSVFLEDEHFIPLLL----NVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 R+ I +LL +F + + + +P + R I +N A + TL+ +A + Sbjct: 189 RQHEAIVSLLEIFAQHISLVSNWVLVQERNAEPPVIARAKRYIEDNQAEDLTLSEVAKAV 248 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 S K ++ +++ ++ R+++A L++ + VA G+ S+++F V Sbjct: 249 NTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPNLRVSEVAFEVGFQSLTHFNRV 308 Query: 228 FRNYYGMTPTEYQERSA 244 F+ G +PTEY+E+ A Sbjct: 309 FKKIVGQSPTEYREQLA 325 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 7/135 (5%) Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 +++A F L L D + + N R+ + N + L IA +S Sbjct: 396 KEKADEFKELVKILSDAKY------QKEKNSMQRIEEYLQKNYQEDINLQEIADRFYLSR 449 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + +K ++ + + + LT RM++A L+ I VA GY + YF VF+ + Sbjct: 450 EYISRKFKQDYDATITDYLTSIRMEKAKNLLKNPYLKIYEVAYGVGYQNEKYFSKVFKKH 509 Query: 232 YGMTPTEYQERSAQR 246 G+TP EY++ + + Sbjct: 510 EGVTPNEYRQSYSTK 524 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 95/248 (38%), Gaps = 13/248 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H I Y V+G+ + +F + I K +N + L Sbjct: 39 HDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDN---PEPYAIVFSLS 95 Query: 65 MLKEEALNLHAHKKVSS-----LLVHHCSRDIPVFQEVAQLSQN-KNLRYAEMLRKRALI 118 ML E ++ K + S LLV + D + ++ + K L + + Sbjct: 96 MLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGYL 155 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRV---CTVINNNIAHEWTLARIASELLMSPSLL 175 F + + + ++ IN+N + + + +A +S Sbjct: 156 FVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYF 215 Query: 176 KKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + +E + + + R+++A++LI SI +A G+++VSYFI VF+ Y G+ Sbjct: 216 CRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGV 275 Query: 235 TPTEYQER 242 TP +Y++ Sbjct: 276 TPFKYKKN 283 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 84/203 (41%), Gaps = 8/203 (3%) Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 ++ + + + L H +S L + + +E+ N+ + E L+ + L Sbjct: 151 SVDILREYIDQLYLEEHDVNIISKRLQEVAKAVVRISEELGITDTNELVVQMEKLKIKYL 210 Query: 118 IFALLS-VFLEDEHFIPLLLNVLQPNM------RTRVCTVINNNIAHEWTLARIASELLM 170 ++ + E + +L + + V I N+ +L +A+ + + Sbjct: 211 LYNNKHDAYNEIIKMVDILFDKMNIKGKLSEGGMKAVIDYIERNLKKGISLEDVANHVNI 270 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S L K ++E ++ +T+ +M A +++V + +A+ Y+ +YF F+ Sbjct: 271 STYYLSKIFKKEMGVNFITYVTDRKMDLAKEMLVNTDIPVLNIALDLAYNEANYFSKAFK 330 Query: 230 NYYGMTPTEYQERSAQRLSNRDS 252 G+TP+EY+E+ R + Sbjct: 331 KKTGLTPSEYREKYRNRKEEENE 353 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 7/217 (3%) Query: 29 FNGGDLVFADA--SQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHH 86 G+++F A + + + + + + L + +L + L Sbjct: 70 LVEGEMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPLRRIELPHPQ 129 Query: 87 CSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR 146 + + LS++ E + L+ +LL + + P + + Sbjct: 130 RGEGEAMLTALTHLSRSPQ----EQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAEFLYHS 185 Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIH 205 +C + +N A + +A+ ++P+ L + T S+ + RM +A ++ + Sbjct: 186 ICNWVQDNYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARMILQKY 245 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 S+ VA CGY YF +FR +G+TP EY+ R Sbjct: 246 HLSVNEVAQRCGYEDSDYFCRLFRRQFGLTPGEYRAR 282 >UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n=6 Tax=Vibrionaceae RepID=Q2BYZ8_9GAMM Length = 293 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 33/271 (12%) Query: 5 HGNCLIA--YARHKYILTMVNGEYRYFNGGDLVFADASQ-------IRVDKCVENFVFVS 55 + ++ Y H I+ + N + G + + + + + Sbjct: 9 QSHVVLKEFYVDHHLIVKLSNVQGDVHINGHAIELKNNSTFVVPKFSHISCSINQ--LNN 66 Query: 56 RDTLSLFLPMLKEE----ALNLHAHKKVSSLLVHHCSR-----DIPVFQEVAQLSQNK-- 104 ++ + L L M+ EE A + K + CS + + L Sbjct: 67 QENIELQLLMIDEESITEAFKYISALKQPTFPTASCSPVYTIPTPAIVDQNFVLFNKLLP 126 Query: 105 ---NLRYAEMLRKRALIFALLSVFLEDEHFIPLL----LNVLQPNMRTRVCTVINNNIAH 157 + L + L+F L+++ +E I + N +P RT + +I + Sbjct: 127 SICGSSMEKTLLSQCLVFILMAL---NEAGIDVFNVYRFNYDEPKERT-IARLITQDPQR 182 Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 +W++ +A L + S L++ L +E S+SQLL + RM AL + +SI +++ G Sbjct: 183 KWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVRMGLALNYLTFSNYSISQISNRSG 242 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 + S +YF F+ YG+TP++++ S Q Sbjct: 243 FGSAAYFCDAFKRKYGITPSQFRTTSRQEND 273 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 73/158 (46%), Gaps = 12/158 (7%) Query: 97 VAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR-----VCTVI 151 + Q ++ E R+++ +LLS H LL + Q + R++ + + Sbjct: 128 LLQALNELRMQPQEQRTARSIVVSLLS------HCHDLLGSQAQTSSRSQALFEAIRQYM 181 Query: 152 NNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIK 210 + + A + +A +SP+ L ++ +++ L R+++A L+ H +K Sbjct: 182 DAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKVK 241 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 +A +CG+ +YF +FR +P+EY+ + +L+ Sbjct: 242 DIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHSQLT 279 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 126 bits (316), Expect = 8e-28, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 11/246 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR----VDKCVENFVFVSRDTLS 60 H C I + ++ E D++F + D E VF + L Sbjct: 38 HTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGLPNDCIYECIVFDMKLLLK 97 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 K+ ++ +K ++ L + + + + K+ Y + ++ Sbjct: 98 DNNACTKQIYDIVNHNKVIAHKLPSNVQALNNCCTSLFEAMRVKSTGY--EFIAQGALYY 155 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMR----TRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L+ LE++ ++ + R V T+I N + TL ++ MSP Sbjct: 156 LIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLEDLSKASGMSPKYFC 215 Query: 177 KKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + E + + L R++ + + ++ SI +A++CG++ VSYFI F+ + G+T Sbjct: 216 RFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDVSYFIKTFKKHKGVT 275 Query: 236 PTEYQE 241 P +Y + Sbjct: 276 PKQYLK 281 >UniRef50_A1TWU6 Transcriptional regulator, AraC family n=2 Tax=Marinobacter RepID=A1TWU6_MARAV Length = 347 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 57/104 (54%) Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 RV VI + LAR+AS L +S LK++L+EEE S+ L+ + R++RA L+ Sbjct: 243 RVRRVIETSHPFPPKLARVASTLYVSERTLKRRLQEEEASFQALVDQVRLERARDLLAST 302 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249 ++ ++A S GY + F F+ + G++P+ ++ R Q Sbjct: 303 TMNLSQIADSLGYADAANFTRAFKRWTGLSPSHFRNRELQTAET 346 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 8/128 (6%) Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 R ++ + V E + I + A TL +++ + S S Sbjct: 410 RGMLSEAMQVLSEQKR-------QADTRPIRTAKQYIQEHYADPLTLEWVSNIVGFSGSY 462 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 ++E ++ + L+E RM RA +L+ S+ V V GY + YF F+ G Sbjct: 463 FSSLFKKETGQNFLEYLSEVRMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATG 522 Query: 234 MTPTEYQE 241 + P E+++ Sbjct: 523 LKPGEFRK 530 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRM 195 P + + + IN + + L IA+ + ++PS ++E S+S L + R+ Sbjct: 305 ESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRI 364 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +++ L+ SI +A+ G+ SYF VF+N MTP +Y++ Sbjct: 365 EQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQN 411 >UniRef50_A6GTF7 Putative transcriptional regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GTF7_9BURK Length = 340 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 9/159 (5%) Query: 95 QEVAQLSQNKNLRYAEM-LRKRALIFALLSVFLEDEHFIPLL------LNVLQP--NMRT 145 E +++Q+ + ++++ + + + S+ +DE LL L LQ + Sbjct: 181 HEYQRIAQHNSFGFSQLRVVLGSTLVNSPSLAADDEALQRLLRDCDLQLQRLQAGGTLAQ 240 Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205 RV + + H TL +A++ ++ + L+ E TS+ QLL E R +RA ++ Sbjct: 241 RVRMQLQQSEGHMPTLQAMAAKENLTERTFMRHLQAEGTSFQQLLDEVRQERACWMLAHT 300 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 +++ +A + GY S F F+ + G TP +Y+ + A Sbjct: 301 DSTVEAIAYALGYEDASNFSRTFKRWCGQTPKDYRHQHA 339 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + + I +N + +L ++ ++ +SP K +EE T++ LTE RM A Q Sbjct: 429 STVEKAKLYIRDNYQKDLSLEEVSRQVDISPYYFSKVFKEETGTNFIDYLTELRMSVAKQ 488 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L++ S+K + + GY +YF F+ G+TPTEY+E Sbjct: 489 LLLESERSMKEIGIMVGYSDPNYFSRSFKKNIGITPTEYKE 529 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 24/256 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + Y + ++ V+ EY N GD+V I E+ + + L Sbjct: 41 HNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDS-CEYENILFNLD 99 Query: 65 MLKEEALNLHAHKKVS-------------SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 ML + + S H S I E + + Y Sbjct: 100 MLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGYR-- 157 Query: 112 LRKRALIFALLSVFLEDEHF-----IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 L+ RA +F F + HF +P+ L+ + + V I N A ++ IA Sbjct: 158 LKIRACLFNFF--FELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQ 215 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 S S K + TS+ L + R+ A +++ + VA CG+ ++SYF Sbjct: 216 WCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYFN 275 Query: 226 YVFRNYYGMTPTEYQE 241 F+ YG++P E+++ Sbjct: 276 RKFKEKYGVSPREFRK 291 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 16/258 (6%) Query: 2 QSLHGN--CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF--VSRD 57 Q LH + I Y + ++NG+ F GD++ +++ + ++ V +S D Sbjct: 36 QKLHWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFD 95 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA- 116 + F+ L+ + +++ ++ RD P ++ L + R A Sbjct: 96 STW-FIHNLRFDPELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYAT 154 Query: 117 LIFALLSVFL---------EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 ++++LL FL E E ++ Q +V V+ N AH WTL +AS Sbjct: 155 VVYSLLLQFLATVNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASL 214 Query: 168 LLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 + +SPS + + L R+++A+ ++ + VA+ CG+ +++ F Sbjct: 215 VYLSPSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNR 274 Query: 227 VFRNYYGMTPTEYQERSA 244 +F+ + GMTP Q++ + Sbjct: 275 LFKKHIGMTPKASQKQHS 292 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 93/252 (36%), Gaps = 23/252 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDK-CVENFVFVSRDTLSLFL 63 H + I + Y +V F+ DLV + K + V Sbjct: 34 HSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGPNLPHAWKGEIVEGNHVVTI------ 87 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLSQNKNLRYAEMLRKRALIFA 120 ++ LN +K + D F E L+ + + ++ + Sbjct: 88 -QFSDKLLNFPILEKRLFSPIKQLLLDSQKGISFSENTMLAMKEKILQLTRMQGFHTVLE 146 Query: 121 LLSVFLE----DEHFIPLLLNVLQPNMRT-------RVCTVINNNIAHEWTLARIASELL 169 LS+ + D H + L + +RT +VC I N L +A+ + Sbjct: 147 FLSILYDLSTADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVN 206 Query: 170 MSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 MS S ++ ++ + R+ RA Q++ ++ + SCG++++S FI +F Sbjct: 207 MSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIF 266 Query: 229 RNYYGMTPTEYQ 240 + G TP+EY+ Sbjct: 267 KKKKGNTPSEYR 278 >UniRef50_C6IYS4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYS4_9BACL Length = 527 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 Q + R + + A E +L ++A+ + + PS L + ++E +++ +T RM+RA Sbjct: 415 QASHVQRAKAYMESCPAEELSLQQVAAYVHLHPSHLSELFKKETGSTFGYYVTALRMRRA 474 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 ++L+ + + +A GY V YF +F+ + G TP+E++E + Sbjct: 475 MELLAVSPAKVSEIAGLTGYEDVKYFSRLFKKHTGKTPSEFREEA 519 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 23/254 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR-----VDKCVENFVFVSRDTL 59 H + Y H Y M + F GD+ S + D ++ R + Sbjct: 36 HDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDG--YVRYLM 93 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-----LSQNKNL----RYAE 110 F L E + + + + + + +Q LSQ ++ R E Sbjct: 94 VAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDELGRLCE 153 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQP-NMRTRVCTVINNNIAHEWTLARIASELL 169 M R IF D F +N+ + ++C + + H +L IA+E+ Sbjct: 154 MFRLLPAIFT-----SSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEVG 208 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 M+ S + + ++SQ +T+ R+ A +L+ + + + G++ + +F+ VF Sbjct: 209 MNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRVF 268 Query: 229 RNYYGMTPTEYQER 242 +N GM+P++Y+ R Sbjct: 269 KNTLGMSPSKYRRR 282 >UniRef50_B5JU19 Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU19_9GAMM Length = 335 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 7/162 (4%) Query: 85 HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLED----EHFIPLLLNVLQ 140 HH +P+ E+ +R+ R L+ A S + E + + Sbjct: 171 HHYKDRLPI--ELVYGKTRDQIRFPGDYLDRPLLMANPSAAQQAVLFCERELEDYRQREE 228 Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200 + +V + ++L +A+ L +S LK++L+E +Y ++L E R++RA+ Sbjct: 229 ADWVRQVRRAMVKQEGGYYSLEEVAAVLHLSVRTLKRRLKEHGANYHRILKEARLERAVA 288 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 L+ +++ VA GY + F FR + G +P++Y+++ Sbjct: 289 LLKEGE-TVQTVAFQLGYQDPANFTRAFRRWTGCSPSDYRQQ 329 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 1/103 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 ++ + I N+ + + +A+ + ++P+ L + ++E + L E +M RA Sbjct: 426 SDSVVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETKMARA 485 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 QL+ G ++ +A GY + S+F +F+ YG+ P EY+ Sbjct: 486 RQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRN 528 >UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PB15_CHIPD Length = 291 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 17/255 (6%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDT----- 58 H C + + +V F+ GD+VF V E++ + Sbjct: 32 FHPECELVFVMESNGKRIVGDSIESFDVGDMVFLGPHIPHVWYNDESYHKNNDQLKARSV 91 Query: 59 -LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY--AEMLRKR 115 + + E+ L K ++ L H R + + + + + L E L + Sbjct: 92 VIYFPKDIFGEKFYGLPETKSLTDLF-HRAQRGMKILGPTYDMLKEQILSLPKKEGLERI 150 Query: 116 ALIFALLSVFLEDE-------HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + +L + E + N + V + N + E +L +AS Sbjct: 151 ISLLNILKILAETKDVQYLASTGYSHAFNAKDNHKIDEVFKYVMGNFSKEISLQDVASIT 210 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +SP + + + S+ Q L E R+ A + + +SI +A SCG+ ++S F Sbjct: 211 NLSPQSFCRFFKNRTKKSFVQFLNEVRIGHACKRLTEEDWSIAEIAYSCGFKNLSNFNRF 270 Query: 228 FRNYYGMTPTEYQER 242 F+ G TP EY+ Sbjct: 271 FKEIVGKTPKEYKNE 285 >UniRef50_B6XD52 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6XD52_9ENTR Length = 282 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 28/249 (11%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKE 68 L+ + L + NGE+ + ++ F K +E + ++L + + Sbjct: 32 LLKVKQGGICLRIENGEWCNLSTNNICFLPKG-----KVIEFIKKAVSEKIALDIMPVSA 86 Query: 69 EALNLHAHKKVSSLLVHH---------CSRDI---PVF--------QEVAQLSQNKNLRY 108 E LN + +K+ S+L + C+ DI P+ QE+ L N + + Sbjct: 87 EMLN-YFYKQNSALFIEKKKTHYHSQVCTTDISNTPILGEVFYSAIQEIRHLEMNTDTKI 145 Query: 109 AEMLRKRAL-IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIA-HEWTLARIAS 166 + K A+ + +LS FL + F P L + + +V I +N TL IA Sbjct: 146 KNVDNKMAIHLNFVLSFFLLENTFYPTLQTSMNVLTKDKVYDYIYHNSGKQNCTLELIAK 205 Query: 167 ELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 +L MS S LK++L E+T++S + RM +A+ L + + R+A GY + +FI Sbjct: 206 QLHMSTSTLKRRLASEDTNFSTISLTSRMNKAMMLSKVDNMPMPRIAQEVGYDDIPHFIQ 265 Query: 227 VFRNYYGMT 235 F+N+Y + Sbjct: 266 AFKNFYQQS 274 >UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJJ5_9FIRM Length = 398 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 103/256 (40%), Gaps = 18/256 (7%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 +Q H + + Y + ++ DL+ + + D V+N S T+ Sbjct: 154 VQPAHKSYELIYVYEGSLDITLSSGTNTLQPHDLIIYRSDK--ADLSVQNG--CSYLTVV 209 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL--I 118 + +LH HC+ ++ + ++ Y L L + Sbjct: 210 FEV----NHRRSLHILNHT-----FHCTSEMQQILWKLLIESEEHSYYTHTLMVCYLQEV 260 Query: 119 FALLSVFLEDEHFIPLLLNV--LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L+ F E + LL + Q ++ + + +N + T+ I E +S S L+ Sbjct: 261 LLLIMQFYETMNHKTLLTDSKSAQNDLLSEILAYMNKRLTEPLTIEDICHEFFISRSSLQ 320 Query: 177 KKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + TS L ++Q++ +LI + ++I +A G+ S+ YF +F+ Y+ T Sbjct: 321 ALFKTHLNTSPKNYLLNIKLQKSKELIRENQYTISEIAYRLGFSSIHYFSRLFKKYFNTT 380 Query: 236 PTEYQERSAQRLSNRD 251 P++Y ++A+ + ++ Sbjct: 381 PSDYARKAAENQNRQN 396 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 16/254 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H I Y + V+ Y GD++ I E + + + + Sbjct: 41 HEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSM-EYENILFSVD 99 Query: 65 MLKEEALNLHAHKKVSSLLVHHCS------RDIPVFQEVAQLSQNKNLRYAEM-----LR 113 M + + + + LL +D P++ +++ + +E L Sbjct: 100 MFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYHLA 159 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLM 170 + F V + + R + + I+ N ++ IAS Sbjct: 160 LKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCGF 219 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S + + S+ L + R+ A +L+ + S+ VA +CG+ ++SYF +F+ Sbjct: 220 SESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMFK 279 Query: 230 NYYGMTPTEYQERS 243 YG+TP+ Y+E Sbjct: 280 KKYGVTPSRYRETH 293 >UniRef50_UPI0001789612 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789612 Length = 405 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Query: 143 MRTRVCTVINNNIA-HEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + R +I A E TL A L +SP L + L++E TS+ L+T+ R+Q+A+Q Sbjct: 298 LVRRARQLIQEQYAVRELTLESFAQALQVSPVYLSRMLKKELGTSFITLMTQTRIQKAIQ 357 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 L+ SI +A GY S YF F+ G++P Y++ +A Sbjct: 358 LLNATELSILDIAERVGYDSQHYFSTAFKKVMGVSPNRYRKGAA 401 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRAL 199 + R + I+ ++ +L ++A + M+P+ + ++E +Y + +T+ ++++A+ Sbjct: 414 TSPVQRAISFIHEHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLRKAM 473 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 L+ I +A GY + YF +F+ + G+TP+EY+ Sbjct: 474 HLLRETPAKISEIANEIGYEDIKYFNRLFKKWTGLTPSEYR 514 >UniRef50_P41782 Transcriptional regulator hilD n=38 Tax=Salmonella enterica RepID=HILD_SALTY Length = 309 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 67/114 (58%) Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191 ++L+ Q ++ RV +I+++ + +W L +A + MS S LK+KL EE TS+S + Sbjct: 196 YEIILSSAQITLKERVYNIISSSPSRQWKLTDVADHIFMSTSTLKRKLAEEGTSFSDIYL 255 Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 RM +A +L+ I ++ VA+ CGY S SYFI F+ Y+ TP+ + + + Sbjct: 256 SARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH 309 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRA 198 + ++ R +N E ++ + A + +SP K + + ++S LT R++ A Sbjct: 416 RSHVLQRALLFVNQRFKEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEEA 475 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +LI S+K + GY +YF VF+ G+TP+EY+++ Sbjct: 476 KRLIAGRSLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQ 519 >UniRef50_C4V3H9 Response regulator n=2 Tax=Selenomonas RepID=C4V3H9_9FIRM Length = 255 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 50/94 (53%) Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHG 206 + +IA T+ +A EL +S S L K TS+S LTECR++RA L+ Sbjct: 157 AMRHMEEHIAEPITVREVADELGLSVSYLHKLFSRCGTSFSSYLTECRLRRAGHLLRESD 216 Query: 207 FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + VA +CGY YF +F+ + GM PTEY+ Sbjct: 217 AKVYAVAAACGYQDTRYFSKIFQKHMGMKPTEYR 250 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 12/144 (8%) Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP-------NMRTRVCTVINNNIAH 157 +L+ +E+ R+L L++V F LL+ QP ++ R+C + N Sbjct: 142 DLQASELQTPRSLQLQLMTVL----TFTQELLHQPQPEKYQRAQSVFQRICIYVQENFHK 197 Query: 158 EWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 + +A +SP+ L + R++ +++ + R+ RA ++ + ++ +A C Sbjct: 198 AISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKFMLRRYPMHLEEIAHRC 257 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQ 240 G+ +YF VF+ G TPTEY+ Sbjct: 258 GFRDTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=A1RF43_SHESW Length = 293 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 43/231 (18%) Query: 27 RYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHH 86 + NG F Q RV + +L LP + E NL K+ Sbjct: 89 IFINGNLTGFVSCGQARVAE-------------NLPLPKIVENDKNLPTESKL------- 128 Query: 87 CSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVL------- 139 I ++ EV +LS K A++L ++ +L E+ + ++ NV Sbjct: 129 ----IELYHEVPELSLMKIKSAAQLLNL------IIENYLSKEYNLRIVKNVSPVKNQKL 178 Query: 140 -----QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 + IN N + L ++AS+ +S + +E T ++ L Sbjct: 179 ETLGRHQATMEMILNHINQNFSDNLNLEQMASKANLSMFYFSRTFKELTGTGFTAYLINK 238 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 RM A L+ +SI+++A S GY+ V YF +F+ + +P+E++ S+ Sbjct: 239 RMTEAHCLLEQTNWSIEKIARSVGYNDVHYFSRLFKKTFNRSPSEFRNHSS 289 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRM 195 ++ + + IN N E +LA+I++ +P K ++ SY LT+ R+ Sbjct: 407 QIIHNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKTYLTKLRI 466 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 Q+A +L+ SIK +A G+ +YFI F+ + G+TP+ ++ Q Sbjct: 467 QKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMPEQ 516 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 94/252 (37%), Gaps = 12/252 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR----VDKCVENFVFVSRDTLS 60 H I ++ GD++F ++ I VD E VF L Sbjct: 38 HKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHSGIPVDCTYECLVFDISSLLQ 97 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 + E +H KK+ L + ++ ++ ++K Y LR ++ Sbjct: 98 QNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFEIMKDKKNGYQ--LRIYGNLYY 155 Query: 121 LLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L + E +I +N + +V I +L +A + M+ Sbjct: 156 FLGLVEEKNLYIKEKEFSAINKKSLSRIKKVLFFIETKYMENISLEDMAKTIKMNEKYFC 215 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY-YGM 234 K +E + + + L R++ A + I SI VA CG++ SYF VF+ Y GM Sbjct: 216 KFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGFNDTSYFTKVFKKYNSGM 275 Query: 235 TPTEYQERSAQR 246 TP EY + ++ Sbjct: 276 TPREYSKLYLKK 287 >UniRef50_C7GHF1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF1_9FIRM Length = 517 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 20/221 (9%) Query: 46 KCVENFVFVSRDTLSLF-------LPMLKEEALNL-----HAHKKVSSLLVHHCSRDIPV 93 K + N F++R SLF ML E L HA + S+ + + + Sbjct: 297 KSILNDAFLNRYATSLFEYLQAFNRNMLAETLTQLTNELYHAADSIDSIRLFLTDLYLQI 356 Query: 94 FQEVAQLSQNKNLRYAE------MLRKRALIFALLSVFLED-EHFIPLLLNVLQPNMRTR 146 ++ +L N+ + ++ ++ ++ ++ F E E + + N + ++ Sbjct: 357 KEQANRLYNGANIPFPSNADIIRLIEEKYYLYEIILYFTEQFEMIMSSIGNSSRESVLDD 416 Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIH 205 + IN+N A TL IA + S L K ++ +++ + R++ +++L+ Sbjct: 417 ILHYINHNYASNITLENIAPLFGYNSSYLGKIFRKKMGENFNSYVDHVRIKHSMELLCSS 476 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + +A GY +V YF F+ Y G +P EY++ Sbjct: 477 ELKVYAIAEKVGYRNVDYFHIKFKKYVGKSPAEYRKEHKNE 517 >UniRef50_Q47ZJ7 Transcriptional regulator, araC family n=2 Tax=Alteromonadales RepID=Q47ZJ7_COLP3 Length = 317 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 106/268 (39%), Gaps = 27/268 (10%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR--VDKCVENFVFVSR-- 56 + S+ + + + N D+V + D+ V + Sbjct: 46 LSSIEMPRFHIALEGDFYVGAGSSN-INVNPMDIVMIPGGDMHWIADEIESERVPCEQAG 104 Query: 57 DTLSLFLPMLKE---EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY----- 108 D +L +P+ ++ + + + H +P +++ + N N+ Sbjct: 105 DACALGMPLFQQGEITNKIMCGIVEYDEAIEHPILSALPSIIQLSNIQSNDNIWMTVKLI 164 Query: 109 -AEMLRKRA------------LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNI 155 AE++R L LL+ F+E + L+ L+ ++ +I+ + Sbjct: 165 DAEIIRTNNKKNSIIDRLTEVLFIQLLNSFIEKNEHLTGFLSALKEPRLNKILQLIHQHP 224 Query: 156 AHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAV 214 +WTL I+ + MS + L++K + S ++ RM +A QL+ S++ +A Sbjct: 225 ERQWTLDIISDVVGMSRATLQRKFKAAIGVSPMVYISRWRMAKAYQLLKHSNLSLEGIAD 284 Query: 215 SCGYHSVSYFIYVFRNYYGMTPTEYQER 242 G+ + F+++YG TP++++++ Sbjct: 285 VIGFSDARTLSHAFKDHYGDTPSQFRKK 312 >UniRef50_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CBW2_9BACE Length = 1319 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 104/218 (47%), Gaps = 15/218 (6%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92 D++ + + K +++ + +S + L + + A + + S + Sbjct: 1115 DIMMPKRNGFELCKAIKSNINMSNIPVILLTARISKSAEMTGYEMGADAYIAKPFSLAL- 1173 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 +F V L + R E + + L++ DE ++ R+ I Sbjct: 1174 LFNRVEHLLALQLQRQKEFQQNIEVNPQKLTITPLDE------------DLLNRILACIE 1221 Query: 153 NNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIK 210 N+++ E+++A ++ +++MS L +KL+ S + + R+++A QL++ + ++I Sbjct: 1222 KNLSNSEYSIADLSKDVMMSRMNLYRKLQAITGQSPTDFVKTIRLKKAAQLLLENRYTIV 1281 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 VA + G+++ SYF VF+ +G+TPT+Y E+S Q ++ Sbjct: 1282 EVAYTVGFNTPSYFTRVFKEQFGITPTQYLEKSGQNVT 1319 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 7/181 (3%) Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 +K+ A+ A + +S L + H P + Q+ + LR E ++K L+ Sbjct: 342 MKKPAVLREAEELLSLLAMFHLPGGPP----LPQIREVGKLRSVEEVKK--LVLQGFHAL 395 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EET 184 E+ P+ + L + + I +L +A E+ +S + + + Sbjct: 396 REEAMRHPVPESTLHERIVLQAVRYIKARFTEPISLQEVADEVAVSRNYFSELFKRVTGH 455 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 ++ + + R++RA +L+ + VA G++ V YF +F+ GMTP EYQ + Sbjct: 456 NFIDYVIDLRLKRAKELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMVGMTPAEYQGQHR 515 Query: 245 Q 245 + Sbjct: 516 K 516 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%) Query: 21 MVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVS 80 +G+ G +V A +R+ K V + +P + + + Sbjct: 56 TFDGKPYVIEPGMVVHAGPG-MRLSKEVIGDREWEYAVIHYHIP---QHERDEYPLFHKD 111 Query: 81 SLLVHHCSRDIPVFQEVAQLSQNKNLR-YAEMLRKRALIFALLSVFLEDEHFIPLLLNVL 139 L H S +P V Q+ +++ A + + L +LL P Sbjct: 112 FSLAHGRSAKVP--HLVRQILDIQSIPGAAAKFQTKVLFLSLLQEIFTAACGQP---GQE 166 Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 + I N A E T+ ++A E + + S L ECR+ +A Sbjct: 167 NSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRISKA 226 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +L+ G S+K+VA GY YF F+ Y G++P+EY+E Sbjct: 227 KELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYRE 269 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 92/254 (36%), Gaps = 19/254 (7%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 Q H I+Y V + GDL V + + Sbjct: 33 QHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIF 92 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHC------------SRDIPVFQEVAQLSQNKNLRYA 109 +L++ + K+ SLL + + + + + K RY Sbjct: 93 RTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYE 152 Query: 110 EMLRKRAL-IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 ++ + + + A+L + D + N + IN++ A T+ ++A Sbjct: 153 FLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDD-----AIQYINDHFATNLTVQQVAERS 207 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MSPS ++ ++ ++ Q L R+QR +L+ SI+ A GY + +F + Sbjct: 208 FMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSL 267 Query: 228 FRNYYGMTPTEYQE 241 FR G+TP EY+ Sbjct: 268 FRKKTGVTPREYRR 281 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 143 MRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + R I + + + TL +A L +SP L + +++E S+ LLT+ RM++A + Sbjct: 295 IVRRARQYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELGISFIHLLTKIRMEKAAE 354 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L++ I +A GY + YF F+ G++P +Y+ Sbjct: 355 LLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQYRR 395 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIV 203 R C I + A + L IA + +S + + + ++E +Y++ L + RM++A +L+ Sbjct: 437 ERACEYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMNYNEYLMQVRMEKAKELLK 496 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + A GY + SYFI +F+NY G++P+EY E+ Sbjct: 497 RQTLKVADAAALVGYSNTSYFIKLFKNYTGLSPSEYMEQQR 537 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 5/235 (2%) Query: 21 MVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVS 80 VNGEY + + G+ F + + S + + + K+ Sbjct: 73 FVNGEYYHLSKGN-AFLLYPHVEAWYEADLTEPWSYFWIGVRGVDADSFFTEVGFSKEKP 131 Query: 81 SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA-LLSVFLEDEHFIPLLLNVL 139 +VH + ++ Q L FA LL E+ H+ L ++ Sbjct: 132 VGIVHQMDNLLLYINKILQKQDYTIEEQLSRSAYMHLFFANLLRGKQEEAHWGGPLKDLG 191 Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRA 198 + RV ++ + + +++ +A E+ + + L ++ S + L RMQ A Sbjct: 192 SHS--ARVRAYLDEHYHEDISISALAKEMGIHRAHLFNSFKKDTGYSPKEYLLYIRMQNA 249 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 ++ G SI +A GYH F +FR G++P +Y+ + L NR++ Sbjct: 250 KAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIGVSPLQYRNMKEEMLYNRETG 304 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 20/257 (7%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV-------------DKCVENF 51 H I Y R + ++G+ G + A + + +E Sbjct: 37 HDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFI 96 Query: 52 VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 F ++D L + + L+ IP+ E+ + +N + Sbjct: 97 SFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKL---IPILDELVE--ENGKMGTHRQ 151 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 ++ R + ++ + +E L N + + I +N LA ++ +S Sbjct: 152 IQVRIRLLQMMDLLVEYSQLEELTRNA-SGELEKEILLYIQDNYHDNIGLAELSEHFHLS 210 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + + E + +Q + R++ A L+ S+ +A+ GY +VSYFI F + Sbjct: 211 EKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNVSYFIRRFSS 270 Query: 231 YYGMTPTEYQERSAQRL 247 G +P Y+ A+R Sbjct: 271 AMGESPLRYRNGKARRD 287 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 4/150 (2%) Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 LS N+ + L R ++ ALLS E + + ++ + V + N++ Sbjct: 128 LSLNEVSLQPDPLTARLVVAALLSHCREQLVGLEMRVSRSRDLFLA-VQDYLEENLSLPL 186 Query: 160 TLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 T +A ++P+ L ++ +++ LT R+++A QL+ + +K +A +CG+ Sbjct: 187 TRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKVKEIAHNCGF 246 Query: 219 HSVSYFIYVFRNYYGMTPTEYQE--RSAQR 246 +YF VF+ Y +P+EY+ RSAQ+ Sbjct: 247 VDSNYFCRVFKRYTERSPSEYRRHCRSAQQ 276 >UniRef50_Q1N3I2 AraC-type DNA-binding domain-containing protein n=1 Tax=Bermanella marisrubri RepID=Q1N3I2_9GAMM Length = 338 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%) Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE--WTLARIASELLMSPSLLKKKL 179 L L++ ++ L+ ++ ++ ++ N+ +A +L S L+++L Sbjct: 211 LPELLKEAPYVFLVKPNNTTSINAQIRRILQGNMDDSELPDFETVAHKLNTSTQTLRRRL 270 Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 +EE TS+ + + R A+ + SI +A+ G+ S F F+ + GMTP +Y Sbjct: 271 KEENTSFQAIKDQVRRDMAIYYLGDPNISINEIALKVGFTEPSTFHRAFKKWTGMTPGDY 330 Query: 240 QERSAQ 245 + AQ Sbjct: 331 RSEQAQ 336 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECR 194 ++ ++ + + + E +L +IA + +S + +K ++E + S L R Sbjct: 428 IHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRIR 487 Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 +++A L++ I ++A GY YF VF+ G TP EY+++ Sbjct: 488 IEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKKH 536 >UniRef50_UPI0001788C2F two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C2F Length = 532 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 5/135 (3%) Query: 121 LLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 LL + +D F+ L + + I N E +L +A + P+ + Sbjct: 398 LLMQWAQD--FVDNLTESGDRDATLIESAKRYIEENYMQELSLTSLAEQYNYHPTYFSEM 455 Query: 179 LRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 +E S+ Q +TE RM+ A++L+ ++ +A G+ S YF F+ + +P+ Sbjct: 456 FKEGAGVSFIQYVTEVRMKHAVRLLQETRLTVWDIAELTGFSSPGYFSSKFKKMFNQSPS 515 Query: 238 EYQERSAQRLSNRDS 252 E++ ++++ + D Sbjct: 516 EFRLSQSEKIEHDDP 530 >UniRef50_C6UHW7 Putative AraC-type regulatory protein encoded in prophage n=2 Tax=Escherichia coli RepID=C6UHW7_ECOBR Length = 237 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 4/165 (2%) Query: 80 SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVL 139 S L+ C + VA L N + + +++R + + A L+V ++ L L Sbjct: 77 PSYLIVECEDFSLLKNLVACL--NCDSKTVDVVRNQ-ISLACLAVLSSEKIVQSFLFGSL 133 Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199 ++ +V +I+++I+ W L I+S L MS SLLK+KL++E S+S+L+ E RM A Sbjct: 134 N-SLGCKVKAIIHSDISASWRLCDISSRLYMSESLLKRKLKDEGLSFSKLILEERMMMAQ 192 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 +L++ ++ +VA CGY + SYF+ VFR Y+G+ P +Y R + Sbjct: 193 RLLIYSNHTVGKVAGICGYDNASYFVSVFRGYFGVPPHQYLSRFS 237 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 12/162 (7%) Query: 89 RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPL--------LLNVLQ 140 R+IPV ++ +++ +L + +F DE L L+ Sbjct: 1037 REIPVIVITGRMLSEEDM---ALLNQGVTTILSKGIFSADETLAHLQAALERRRRLSDQA 1093 Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRAL 199 + + I+++ H T IA + MS L R+E T+ + L R+ +A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L+ SI +A+ G+ S SYF VFR G +P EY+ Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 >UniRef50_B9JNI2 Transcriptional regulator protein n=2 Tax=Bacteria RepID=B9JNI2_AGRRK Length = 324 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 8/161 (4%) Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 A+ L L+ AL E L L T ++ + AH WTLA +A Sbjct: 165 IAQQLAYTMLVQALRLHLAEGVTGGVGWLFALADRQMAVAITAMHEDPAHRWTLASLAER 224 Query: 168 LLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 MS + K +E TS LT RM A + + SI +A+S GY S S F Sbjct: 225 AGMSRTTFTLKFKETVGTSPMDYLTRWRMMVAGERLTHSSDSISVIALSLGYESESAFST 284 Query: 227 VFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDR 267 F+ G +P +Y D AAS + G DR Sbjct: 285 AFKRMMGCSPRQY-------GRGADPAASFHDRSETVGADR 318 >UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVE2_9BACL Length = 215 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 4/165 (2%) Query: 83 LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR---ALIFALLSVFLEDEHFIPLLLNVL 139 + H + + +E +L K + + R + A + E E + + + Sbjct: 46 VFHVTIATLELHREAKELDGLKYAYFKAIDEARDAAGALQAFNAFLSEVEPLVAARVPLP 105 Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRA 198 + I + TL+ ++ +PS L +S+ L R+ +A Sbjct: 106 SDGNMKLLLDYIEEHYGEPLTLSSLSRHFHFNPSYLSSYFSAHNDEGFSEYLNRVRIAKA 165 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 +L+ G I + GY SYF VF+ G++P EY+ + Sbjct: 166 KELLRSDGLPISEIGSRVGYSDPSYFTKVFKKQMGLSPREYRRQQ 210 >UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3X5_9BACT Length = 286 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 5/188 (2%) Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN-KNLRYAEMLR 113 S LF+ + E + L + S + D PV +L + + + R Sbjct: 97 SPYWRFLFVSVYGSELVRLVTDFRRSHGFLLQHGTDSPVVASAWELLKKCREKKLDNRYR 156 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 A + + + Q + RV N++ ++ +A S Sbjct: 157 ASAAAYDFVMSLFSEPAG---RGTHAQDDFLKRVHAYALANLSRPLSVGDLADAAGCSRW 213 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 ++ ++ E S + +T+ +M+ A++L+ S+K VA +CG+ SYF VFRN+Y Sbjct: 214 HFSRRFQQLEGKSPHEFVTDLKMRLAVRLLQTTNGSVKEVAENCGFEDASYFCKVFRNHY 273 Query: 233 GMTPTEYQ 240 G++P ++ Sbjct: 274 GVSPAGFR 281 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 22/256 (8%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL---- 59 LH I ++ + GD+V + I ++ V+ L Sbjct: 34 LHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIH-CSLLDKGKTVTTSALYFCP 92 Query: 60 SLFLPMLKEEALNLH---AHKKVSSLLVHHCSRD-----IPVFQEVAQLSQNKNLRYAE- 110 SL M+ E+ +LH K + ++ R+ +F E+A+ + +L E Sbjct: 93 SLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEIAKETAIADLYSGET 152 Query: 111 --MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 +L + A++F + E PL+ P I+ ++ E L +A+ Sbjct: 153 VALLIRYAIVFVSRNCGTAQEKLSPLV-----PAWIKESLAYIDAHLHEELDLKMLAAHA 207 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 + PS KK + +Y + L R+ +A L+ SI+ +A +CGYHS+ +F Sbjct: 208 CVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACGYHSMPHFYRT 267 Query: 228 FRNYYGMTPTEYQERS 243 FR G TP Y++ S Sbjct: 268 FRAATGTTPAAYRKNS 283 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 5/237 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI + V G + GDL FA SQ+ E + + Sbjct: 39 IRDHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQQPW-EYSWVGFNG 97 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 + A L VHH S + + + ++ L+ + ++ ++ Sbjct: 98 ACAHKLAAQLPF---TDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLFIA 154 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EE 182 + + I N +H+ ++ +A + +S S L + Sbjct: 155 ALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLNV 214 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S LTE R+ A +L+ SI VAVS G+ YF VF+ G+ P++Y Sbjct: 215 GKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 22/274 (8%) Query: 1 MQSLHGN--CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDT 58 M LH + + + + L G GD+ + ++ + Sbjct: 30 MIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVVNV 89 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVF------------------QEVAQL 100 L + + +E A+ + + R F +++ + Sbjct: 90 LFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLMKE 149 Query: 101 SQNKNLRYAEMLRKRAL-IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 NK Y +++ + + +F +LS + L M R+C I + AH Sbjct: 150 YGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQAHPL 209 Query: 160 TLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 +L +I+ MS S R+ S+ + + R+Q A QL+ I R+A+ GY Sbjct: 210 SLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGY 269 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDS 252 +S+F +VF+ G TP+ Y++R R + + Sbjct: 270 EDLSHFNHVFKKLTGETPSLYRKRMKGRSESGEP 303 >UniRef50_B3C9G8 Sensor protein n=2 Tax=Bacteroides RepID=B3C9G8_9BACE Length = 1288 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 21/239 (8%) Query: 11 AYARHKYILTMVNGEYRY---------FNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 ++ YIL NG + D++ D + K +++ S + L Sbjct: 1059 SFENQYYILEAGNGNEAWELLQKESPELTISDVMMPDMDGFELCKLIKSTFETSHIPVIL 1118 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + + + P + + +R E++R++AL Sbjct: 1119 LTSLCDKSDQLEGLGLGAEDYITK------PFDISLLEQRIKSLMRNREIVREKALKL-- 1170 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLR 180 + E++ +L N L + VI+NN+ + ++ A E+ +S SLL KK++ Sbjct: 1171 --IKPENDEQQVILANELNDQFVKKAVEVIHNNMQNLDFDKESFAMEMHVSGSLLYKKIK 1228 Query: 181 E-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 S + + R+ RAL+L+ H ++I V+ CGY S+SYF VF+ Y+G +PTE Sbjct: 1229 ALTGQSPIEFIKSIRLNRALELLQSHKYTITEVSELCGYSSISYFSTVFKKYFGKSPTE 1287 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 14/210 (6%) Query: 46 KCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVF--------QEV 97 + + N + + + + L L+E A K+ L + +I + + Sbjct: 326 EIISNVRYGNISNIDILLSELEETLKKSKADKQYIFNLYYLMLIEINMIKAQVLSSSSQY 385 Query: 98 AQLSQNKNLRYAEMLRKRALIFALLSVF-LEDEHFIPLLLNVLQP---NMRTRVCTVINN 153 Q + +++ + + K I L V + + I + Q ++ +V I Sbjct: 386 EQEDKLQDIEFLSEILKCKSISELNGVLKMSIQKTIEEVQKHNQSKMGSLIKKVIEYIKA 445 Query: 154 NIA-HEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKR 211 N + +E +L+ I+ + +SPS L + ++E + S + E R+++A +L+ Sbjct: 446 NYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFINEYRIEKAKELLATTDLKTYE 505 Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 VA G YF +F+ Y G +P+EY+E Sbjct: 506 VADKVGIPDPHYFSRIFKRYTGYSPSEYKE 535 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 90/245 (36%), Gaps = 12/245 (4%) Query: 6 GNCLIAYARHKYILTMVNGEYR-----YFNGGDLVFADA--SQIRVDKCVENFVFVSRDT 58 G+ I + R +L G G+++F A + + V+ + + Sbjct: 42 GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAP 101 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L L +L + L + + LS++ + + L+ Sbjct: 102 TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI----IQPLV 157 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 +LL + + P + +C + +N A T +A ++P+ L K Sbjct: 158 LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 Query: 179 LREEET-SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + T + + + RM +A ++ + SI VA CG+ YF VFR +G+TP Sbjct: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 Query: 238 EYQER 242 EY R Sbjct: 278 EYSAR 282 >UniRef50_C5BHZ4 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BHZ4_TERTT Length = 350 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW-TLARIASELLMSPSLLKKK 178 L FL + + + L+ + RV ++ + + +++ L MS + ++++ Sbjct: 221 ESLMAFLSTAPYHLVTQDPLKLSFTERVRNILKREVNRSIPSAEQLSEMLNMSVTTMRRQ 280 Query: 179 LREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 L +E TSY +L ECRM+ A+ + S +A G+ S F F+ + G TP E Sbjct: 281 LSKEGTSYQKLKDECRMEVAIHYLACAELSNADIAEKLGFDEPSAFFRSFKKWTGQTPGE 340 Query: 239 YQERSAQRLS 248 Y+++ + Sbjct: 341 YRQQQLPKNP 350 >UniRef50_B0A945 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A945_9CLOT Length = 421 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 55 SRDTLSLFLPML--KEEALNLHAHKKV---SSLLVHHCSRDIPVFQEVAQLSQNKNLRYA 109 ++D + FLP++ E L+ + +K+ SS LV SR I ++LS +K+ + Sbjct: 222 NKDKIIDFLPIIFTDIEILSEYNTEKIRLRSSELVVSISRAIVEGGLDSKLSIDKSEEFY 281 Query: 110 EMLR----KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 + + + L + LE I +L Q ++ I++N T+ +A Sbjct: 282 KKVNVCKSSEDIFLYLNNFILELVDDIFILTQNKQVSLLKEARGFISDNYDKNITVEDVA 341 Query: 166 SELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 + +S S L RE+ + + +T R++++++L+ + SI+ ++ G++S SYF Sbjct: 342 DSVCLSSSYLSHLFREKLNCTVNNYITRVRIEKSIELMSMRELSIQEISEKVGFNSQSYF 401 Query: 225 IYVFRNYYGMTPTEYQERSA 244 +F+ Y G+TP Y+ + Sbjct: 402 TKIFKRYIGVTPVIYRNKFK 421 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 88/249 (35%), Gaps = 14/249 (5%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 H + + + ++ F DLV K T+ Sbjct: 33 FHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLLGPGLPHKWKAPT-LDETQVITIQFHE 91 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-----LSQNKNLRYAEMLRKRALI 118 M LN + + LL+ +R I + + L N R + I Sbjct: 92 QMYNSFLLNKRVFEPIRELLIRS-TRGIVYTGKTFERVKERLLNLSNARGFNTALEFYSI 150 Query: 119 FALLSVFLEDEHFIP------LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 LS+ E LL+ + ++C I N + TL IA + MS Sbjct: 151 LYDLSIADEQRLLTSASYDSSLLVRESRSRRIEKICKYIEVNFKKDITLKEIAELVNMSE 210 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S + ++ S+ LT+ R+ A +L+ S+ +A CG+ ++S F +F+ Y Sbjct: 211 SAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQSVADIAFECGFSNLSNFNRIFKKY 270 Query: 232 YGMTPTEYQ 240 TPT+Y+ Sbjct: 271 KNQTPTDYR 279 >UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococcus RepID=C8ZXM2_ENTGA Length = 495 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 2/162 (1%) Query: 92 PVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE-DEHFIPLLLNVLQPNMRTRVCTV 150 ++++ L++ R +R I L +F E + + + + Sbjct: 334 DIYRQFPALTRENYDRIITRIRASNTIQVLRQLFNEILQLAKDQPQQKRYSEIVQKAVGM 393 Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSI 209 I + E T+ A L +S L + ++E S++Q + R+++A QL++ G +I Sbjct: 394 IEEHYTQELTVKSAAEALHVSVVYLGQVFKKETELSFNQYVNFIRIKKAQQLLLHTGQTI 453 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRD 251 +A + GY++ +YF +F+ G+TP E++E+ Q + D Sbjct: 454 NEIADAIGYNNTNYFSKMFKKLNGLTPKEFREKYEQSYESLD 495 >UniRef50_A0Z3Z2 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3Z2_9GAMM Length = 343 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 10/219 (4%) Query: 31 GGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRD 90 L+ +Q+ + F SRD L ++ + + + A + L V + Sbjct: 113 APMLLEEHKNQVSLIFSPMTFEL-SRDVLGTYMNAMIWRCMKMAAPSALEPLKVEMAAPQ 171 Query: 91 IPVFQ-EVA---QLSQNKNLRYAEMLRKRALI---FALLSVFLEDEHFIPLLLNVLQP-N 142 E A +++ ++N + + L + +E + LL L+ + Sbjct: 172 PDNQHFETAMGCKIAWSQNRTAMVFDKSQLLEPWQMRNTEIIRANEPMLDNLLKSLRTGD 231 Query: 143 MRTRVCTVINNNIAHEWTLAR-IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 + +V + + + E IA L MSP L+++L+ E TSY +++ + RMQ A QL Sbjct: 232 IAGKVRWQLLDALDKELPSEEAIAQALHMSPRTLQRRLKAENTSYGEVVQQTRMQLAQQL 291 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + S V ++CG+ S F F+ + G TP++Y+ Sbjct: 292 LASPDISATEVGLACGFSDASAFTRAFKRWTGTTPSDYR 330 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 98/253 (38%), Gaps = 13/253 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE-NFVFVSRDTLSLFL 63 H + + + +N D V + ++I +C + N V + + F Sbjct: 35 HQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIHSIECPDPNITIVLQIPMKSFE 94 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 + +E+ A K S +R + + + + + Y L+ ++ L Sbjct: 95 GYMSDESRITFADKDES-----QKARLVALVTAMYRTYEKGEFGYR--LKVKSQFMEFLY 147 Query: 124 VFLEDEHFIPL----LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 + + + + + + ++V + N E +L +AS +PS L Sbjct: 148 LIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYMKENYDKELSLEMVASRFGFTPSYLSHMF 207 Query: 180 REE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 RE +T Y L + R++ A++ ++ + +A+ G+ F F+ YG P++ Sbjct: 208 REYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALDHGFADARAFAKAFKKRYGCLPSQ 267 Query: 239 YQERSAQRLSNRD 251 Y+++ Q+ N+ Sbjct: 268 YRKQMNQKQVNQK 280 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 144 RTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLI 202 +V ++ + + TL +A L +SP + +E+ +Y LT R+++A + + Sbjct: 414 IRKVLRYVDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIKKAQEWL 473 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + +I+ + GY +YF VF+ G+TP ++ E +R Sbjct: 474 IYSDKNIQEICYMVGYKDPNYFSRVFKKTVGVTPKQFVENKGKR 517 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 83/247 (33%), Gaps = 11/247 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV----DKCVENFVFVSRDTLS 60 H I + ++ + D++F + + D + VF L Sbjct: 38 HVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHSGIPHDCVYQCIVFDMNTFLK 97 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 + LH + + + + K+ Y L + Sbjct: 98 NNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVLFDAMYEKDTGY--ELTVFGQFYH 155 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMR----TRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + + +FI + R +V I N A+ TL +++ + MSP Sbjct: 156 FFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFC 215 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + E + L R++ A + SI +A G++ +SYFI F+ Y GMT Sbjct: 216 RFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMT 275 Query: 236 PTEYQER 242 P +Y+ R Sbjct: 276 PGKYKRR 282 >UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKC7_9CLOT Length = 545 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 99/240 (41%), Gaps = 28/240 (11%) Query: 20 TMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKV 79 T+ + +GG L F + + ++ R+ + + + ++ + H Sbjct: 312 TIYINDVEPVSGGKLSFDSKDEAELIAAIKFGP---REKIEEAVQAVMDKMSDAKVH--- 365 Query: 80 SSLLVHHCSRDIPVFQEVAQLSQNKNL---RYAEMLRKRALIFALLSVFLEDEHFIPLLL 136 + + V + QL Q +L + AE ++ FA++ ++ E F LL Sbjct: 366 ---FRQCQAYMLSVSSSIVQLIQQYDLDLEQLAEEGEEQGDTFAVIPRMMKKEDFAHWLL 422 Query: 137 NVL--------------QPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE 181 + + + I +N + ++ +I +L MSP+ ++ Sbjct: 423 SAALRMNQAMNRERDNTMKQVIQKAKEYIMDNYQDPDLSVEKICRQLHMSPAYFSTMFKK 482 Query: 182 E-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 E +Y+ LT+ R+ +A++L+ +A GY +YF YVF+ +G++PT+++ Sbjct: 483 ETGQAYTAYLTQVRLDKAVELLNKTDDKTYVIAAKVGYQEQNYFSYVFKKRFGVSPTKFR 542 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 11/256 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + CL+ Y VNG + G F + + + +++ Sbjct: 37 VRSYCLLHYITKGKCKFQVNGMTYHLQAGQGFFIAPDFETRYETDGDEPWN-----YIWV 91 Query: 64 PMLKEEALNL-HAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 EE +L H + + C + + V + Q++ + + + + ++ + Sbjct: 92 GAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFRMSTLYRFI 151 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-E 181 ++ E+ L +V + V T + +++ + A IA+ + ++ S L R + Sbjct: 152 AILSEERQVNQPLASV--NSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQ 209 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + CRM RA L+ SI +A SCGY FR YG++P +Y++ Sbjct: 210 TGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPADYRK 269 Query: 242 R--SAQRLSNRDSAAS 255 + Q S+R S Sbjct: 270 SFLADQTQSSRKPHES 285 >UniRef50_A6KWF7 Sensor protein n=7 Tax=Bacteroides RepID=A6KWF7_BACV8 Length = 1349 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 22/253 (8%) Query: 12 YARHKYILTMVNG----EYRYFNGGDLV-----FADASQIRVDKCVENFVFVSRDTLSLF 62 A + L NG E + DLV + + + + ++ V ++ + L Sbjct: 1108 LASDYHTLESCNGKEALESIFNKTPDLVISDVMMPEMDGLTLCRKIKQNVNLNHIPVILL 1167 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 +EE + + P E+ + + +R E LR Sbjct: 1168 TAKTREEDNLEGLETGADAYMTK------PFHIEILRKTTANLIRSRERLRNTYT----- 1216 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE 181 + + P+ + + R+ VIN N+++ T+ I +E+ +S L +KL+E Sbjct: 1217 GQQTQGDKVQPIEVQSPDDKLMERIMRVINENLSNPNLTVEMITTEVGISRVHLHRKLKE 1276 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + + R+++A +L+ ++I VA G+ + + F F++ YGM P+ Y Sbjct: 1277 LTNQTTRDFIRNIRLKQAAELLSKKRYTIAEVADLTGFTNPNNFSTAFKDLYGMPPSMYM 1336 Query: 241 ERSAQRLSNRDSA 253 E+ ++ N++ Sbjct: 1337 EQHLKQDKNKEEN 1349 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 90/250 (36%), Gaps = 15/250 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN---------FVFVS 55 H + Y +V+ G LV +I N F Sbjct: 28 HDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRFSI 87 Query: 56 RDTLSLFLPMLKEEALNLHAHK--KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113 +DT L + K+ + +V + I Q+ ++ + L Sbjct: 88 KDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVKTLF 147 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + +IF L D + Q + V T + NN + L +A + +S S Sbjct: 148 QEFMIFVLRCKLYGDTSAHEI---DAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRS 204 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L KK ++ + + L R++ A +L++ SI +A +CG++ +YF FR Sbjct: 205 YLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIK 264 Query: 233 GMTPTEYQER 242 G++P +Y+ Sbjct: 265 GISPNKYRHN 274 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 2/191 (1%) Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 D L +F + + + ++ + + + + E R Sbjct: 332 DHLEVFKTNYTTDVFEFKSFLSNVIFNITVLLGNMNYGTQQLETKKYYYFKAIEESRNAN 391 Query: 117 LIFALLSVFL-EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 LL+ F+ E + I R+ I+ + A L +A +PS L Sbjct: 392 TAAELLTAFIGEAKLCIAEKAEQSGNANMKRLLDYIHEHYAESLNLTEMAKHFHFNPSYL 451 Query: 176 KKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + L R+++A +L+ SI ++ GY SYF VF+ + G+ Sbjct: 452 SSYFSTHHNEGFVDYLHRVRLEKASELLRAGEASISEISGMVGYSDHSYFCKVFKKHTGL 511 Query: 235 TPTEYQERSAQ 245 +P+ Y++++ + Sbjct: 512 SPSRYRQQNLR 522 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 9/188 (4%) Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR-------AL 117 +L E N + + ++ + RD E +L ++LR++ Sbjct: 316 LLDEFLKNAASWRILAVESLCGLCRDTFELLEFEAKGNGISLTGTDILREQMEECISLEE 375 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 ++ F H L N + IN + A + +L ++A+ + ++P + Sbjct: 376 ARRIMEAFAGQCHLTE-LQNAPKSKNIQLAVEYINAHYAEQLSLEQVAASVYLNPDYFSR 434 Query: 178 KLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 + E ++ LT+ R+ R++ L+ ++ +A GY++ SYF +F+ YGM+P Sbjct: 435 AFKMETGQTFVNYLTDVRLSRSVWLLENTALRVQMIAQQVGYYNASYFSTIFKKKYGMSP 494 Query: 237 TEYQERSA 244 EY+ + Sbjct: 495 YEYRRKEK 502 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 7/146 (4%) Query: 104 KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV------LQPNMRTRVCTVINNNIAH 157 ++ A++L K L + + LL + + R I + Sbjct: 372 TQMQNADLLSKCTEAVTLREMEQSYRDGLALLCSPRRMKEDISNYTIKRAINYIREHYKE 431 Query: 158 EWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 +L +A L ++P L RE ++S L + R+ A +L+ + +A Sbjct: 432 GISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLLKGTDMKVYEIAEEV 491 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQER 242 GY YF VF+ G++P +Y+++ Sbjct: 492 GYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z3_9FIRM Length = 420 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQ 200 + +V I ++++ TLA +A+ SP+ L + + S + + +TE R+ A + Sbjct: 318 QVVAQVQEYIQSHLSERLTLADVAAVFNFSPNYLSQLFGKYGDSGFVEYITETRIAAAKE 377 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ + +A GY S YF VF+ G++P EYQ+ Sbjct: 378 MLEQGDLKVYEIAEKLGYESAFYFSKVFKKVTGLSPREYQQ 418 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 96/248 (38%), Gaps = 16/248 (6%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKE 68 ++ + H + E G +V + ++ D +F Sbjct: 58 ILIFCTHGKGVVKSATEEWLIESGSIVLLPPGKEHTYYAFDD------DPWDIFWAHFNG 111 Query: 69 EALNLHAHKKV---SSLLVHHCSRDIPVFQEVAQLSQNKNL-----RYAEMLRKRALIFA 120 +++N + ++ + LV + + + ++Q Q Y + ++ A Sbjct: 112 DSVNEYIPQEALQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQVLGA 171 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 L+ ++ + +P + T+ I ++ + +L+ + L +S S L + R Sbjct: 172 TLA-YVSLQSVLPHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSRIFR 230 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + TS +Q + + +M++A + ++ ++A GY YF +F+ G +P + Sbjct: 231 QTVGTSVNQFILDIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSPRVF 290 Query: 240 QERSAQRL 247 +++ RL Sbjct: 291 RKQEKNRL 298 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 3/134 (2%) Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 R I + + E P + + + VI+ + +L +A +L ++P Sbjct: 347 RTMHEIRTCIDSYYETCKGRPA--SAGYSPLIQKALHVIDKSYKEPISLNSVAEQLNITP 404 Query: 173 SLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 L + +E S+ LT RM+RA L+ I + V GY YF +F+ Sbjct: 405 QYLSRLFMKEMSRSFVDYLTSYRMERAKSLLQDTNMKINMICVQVGYQDAKYFCTLFKKI 464 Query: 232 YGMTPTEYQERSAQ 245 G+TP +Y+ S Sbjct: 465 TGVTPNQYRASSPN 478 >UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2Y7_9BACL Length = 118 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + V + + A L IA + P+ K+ +E+ S+ L RM+ A Sbjct: 13 EIMEAVRLYLEQHYAEPIQLQMIAERFFIHPNYFSKRFKEKYGESFVDYLNSIRMKEAAA 72 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 L+ I+ ++ G+ +YF VFR +YG TP +Y+ER ++ Sbjct: 73 LLGETNLKIREISERVGFEDAAYFSSVFRKWYGETPKQYRERQLKK 118 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Query: 123 SVFLEDEHFIPLLLNVL---QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 +++ H++ LL+ + +VC +I+N T+ ++S++ +SP+ L+ Sbjct: 409 AIWRAAAHYLELLMERATDKNAKLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIF 468 Query: 180 R-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 R + + LT R+++A +++ ++ +A GY S SYFI +F G+TP E Sbjct: 469 RDKTGMTIHDYLTRIRLEKAKEMLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNE 528 Query: 239 YQER 242 Y++ Sbjct: 529 YRKN 532 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRAL 199 N +V I N+ H+ IA + ++P+ L + R+E S + + + RM R++ Sbjct: 427 SNTIAKVQGYIEENLQHDLNREEIARHVYLNPAYLSRLFRKETGKSLTDYMVDRRMFRSI 486 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + + + I +A+S GY S S+F F+ GMTP +Y+++ Sbjct: 487 RELKLTNHKISDIAISVGYASFSHFSKQFKKSTGMTPQDYRKKYQN 532 >UniRef50_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QI0_MANSM Length = 284 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 7/229 (3%) Query: 24 GEYRYFNGGDLVFADASQ-IRVDKCVENFV-FVSRDTLSLFLPMLKEEALNLHAHKKVSS 81 G+ G++V A Q V + + F ++L ++ E A V Sbjct: 50 GQELTIQAGEMVLLAAGQTFDVLNNPDAKLGFYQAGWIALEQRVVDEFADLFGVETYVQE 109 Query: 82 LLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP 141 L + +V + + + A L + +F LL+ +L+ EH + + Sbjct: 110 LAKIQPLAPLKAHFDVVRQALENDE--APELVLKLKLFELLA-WLKAEHL--SFVPHEKH 164 Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201 N+ ++ +I +N A EWT IA +L +S + L++ L++ +T++ ++LT+ RM RAL L Sbjct: 165 NLLRQIRKMIASNTAFEWTAETIARQLHLSETSLRRALQKSDTTFREVLTDVRMSRALTL 224 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 + I + + R+A GY S S F F+ +G P++ +E +Q + N Sbjct: 225 LQITKWQVARIANEVGYDSPSRFTVRFKQRFGFLPSDIRENLSQPVQNE 273 >UniRef50_A4CGA1 Sensor protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CGA1_9FLAO Length = 969 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 16/239 (6%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRY-FNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 L + YA + + E+ D++ + ++ S + L Sbjct: 739 LQEKYRVLYAEDGFQGERMAIEHIPDVVVSDVMMPRKDGYELCHALKTNTKTSHIPIILL 798 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 +E + + L +E+ +N R + K +L Sbjct: 799 TARAGQENKMEGLFQGAEAYLTKPFEA-----RELLVRIRNLMGRQKALWEKMQHSSLVL 853 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNI-AHEWTLARIASELLMSPSLLKKKLRE 181 S L+ L L +V + I +++ + E ++ +A ++ S + L +KL+ Sbjct: 854 SGELD--------LPSLDDAFLKKVGSAIESHLDSAELSVEFLAQQVGFSRAQLHRKLKA 905 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S +QL+ E R+++A L+ ++ VA S G+ ++SYF FR YGMTP+ + Sbjct: 906 LTGKSPNQLINEVRLEKARLLLQSRSATVSEVAYSVGFSNLSYFTKRFRERYGMTPSAF 964 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 97/247 (39%), Gaps = 9/247 (3%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF---VSRDTLSL 61 H + Y H M ++F GD+ S + + + R + Sbjct: 36 HDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEYAADSADEDGCVRYLMVA 95 Query: 62 FLPMLKEEALNLHAHKK---VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 F L E ++ + + + + P V + + ++ E+ R A+ Sbjct: 96 FKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKTLSEMNGMDELGRLSAMF 155 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMR--TRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L +F +H ++ N+R ++C + + H L IA+E+ M+ S Sbjct: 156 RLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSIALDDIAAEVGMNRSAFC 215 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + + ++SQ +T+ R+ A L+ + + G++ + +F+ VF + GM Sbjct: 216 SYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGFNDLPHFVRVFTSTMGMP 275 Query: 236 PTEYQER 242 P++Y+++ Sbjct: 276 PSKYRKQ 282 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 100/250 (40%), Gaps = 17/250 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE------NFVFVSRDT 58 H I Y + + ++GE GD + + F+F + Sbjct: 50 HDEFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYI 109 Query: 59 LSLFLPMLKEEALN------LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 ML ++ L L + +V C + I ++ +A+ + ++ A++ Sbjct: 110 SFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIY--MAENDETESKITAQIK 167 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 K L+ +L ++ + F+ + + + + I N + +L + +S Sbjct: 168 TKIILLQFILEMW--KKGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSE 225 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + +E + SQ +T R++ A QL+ S+ A+ GY +VSYFI F+ Sbjct: 226 KYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKA 285 Query: 232 YGMTPTEYQE 241 YG++P +Y+ Sbjct: 286 YGISPLKYRN 295 >UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y024_CROTZ Length = 296 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 15/259 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN---------FVFVS 55 H + Y Y + MV+ + G L + E + Sbjct: 42 HQCLELLYVEEGYGVVMVDNQQYTMRPGRLFIFPPMTLHKVMVEERERERYRRTVIHLDN 101 Query: 56 RDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNK-NLRYAEMLRK 114 L L P + A + + V + + L + +E Sbjct: 102 HAALRLLAPFAQRYARLEALSLRGARATVVDFADIHAHLDHLFTLYAPRLAKGRSEHEEV 161 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + + LLS+ E P N L T+V + N A +++L +A +L S S Sbjct: 162 ASFLIHLLSLLPETPAPPPRASNALS----TQVMFWVEENYAQKFSLGALALKLNRSRSY 217 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L ++ ++E + LT R+++A +L+ H +S+ +A G+ +YFI FR G Sbjct: 218 LSRRFQQETGEAIHDYLTTFRLRKACELLRHHAYSVADIARMTGFSDTTYFISSFRKRLG 277 Query: 234 MTPTEYQERSAQRLSNRDS 252 TP +Y++ + Sbjct: 278 ETPLQYRKSRKHEGPHGGP 296 >UniRef50_D2QQS8 Histidine kinase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQS8_9SPHI Length = 1343 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 34/254 (13%) Query: 17 YILTMVNGEYRYF--------------NGGDLV-----FADASQIRVDKCVENFVFVSRD 57 +ILT ++ E+R NG DL+ + + + + +++ S Sbjct: 1103 FILTTLSTEWRVLRVNNGKAGLEAAIMNGPDLIISDVLMPELNGYELCRQLKSNPITSHI 1162 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 + L + E+ + L +V +L R A+ + R Sbjct: 1163 PILLLTAKVSAESRLEGLNAGADDYLAKPF--------QVNELRARIRNRLAQQQQARHY 1214 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLK 176 + L E ++PL + + RV ++ +++ + + +A+ + MS L Sbjct: 1215 FRSQLLR----EGYLPLASQAPEDDFMNRVYALLESHLDDSTFGVEPLAAAIGMSRMHLN 1270 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 +K++ S ++L+ R++RA +L++ G S+ VA G+ + +YF VF+ +Y +T Sbjct: 1271 RKIKAMTGLSPNELIRAVRLKRAAELLM-TGASVSEVADRVGFDTPAYFSKVFKEHYQLT 1329 Query: 236 PTEYQERSAQRLSN 249 P+EY E+ Q ++ Sbjct: 1330 PSEYVEQHRQEMTK 1343 >UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2M9_9GAMM Length = 343 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 14/230 (6%) Query: 23 NGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALN---LHAHKKV 79 G + NGG++ F DA+Q E F S+ +S+ P+L + N L A K Sbjct: 118 GGREVFLNGGEMSFYDATQSHRITIPEQF---SKILISIPRPLLDKRLNNVGRLTATKLA 174 Query: 80 SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVL 139 S+ + + + V QL Q ++ + ++ +F LL E+E + L Sbjct: 175 SASGIGAVVASM-IQSTVQQLDQMTDVHFQQLSNPILDLFTLL--LSENEVELSTLSRHR 231 Query: 140 QPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198 + ++ I+ +I A +++ + +S + EE+TS + +T R+ Sbjct: 232 HFALL-QIKQFIHLHIKESSLDAAAVSAGVGLSIRYINNLFYEEQTSLMRYITTQRLALT 290 Query: 199 LQLIVI---HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + +I VA+ CG++++++F +FR+ YG++P Y+++ Sbjct: 291 QSYLSNIIYRNLTITEVAMQCGFNNMAHFSRIFRHRYGVSPRAYRQQQLN 340 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 2/177 (1%) Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 + E A K++ L S + L+ + + L A LS Sbjct: 347 MSESLTIRSAQKELRKLGAAAGSEWPAITTASPLLADQRAIDSVMTLSALHAYVAELSAA 406 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EET 184 +E H + N + + ++ + + L +A+ M PS L ++ + Sbjct: 407 IE-AHIRARASSSDASNPMSEIVAYLDGHYFEDVGLIDMATRYHMDPSYLSRQFKAATGV 465 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ + +T RM++A +L+ + +A GY + YF VF+ + G TP+E++E Sbjct: 466 NFIEYVTRKRMEKACELLRESDRKVSDIAELVGYENQRYFSQVFKKFTGQTPSEFRE 522 >UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T3_ABIDE Length = 534 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 E+++ + F LL+V + + NM R+ +N + + TL +A + Sbjct: 406 EIIQYLSKCFTLLAVQNDKN------FDERYQNMAKRILDYLNEYYSEDLTLDSVADKFH 459 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 MS + + + L++ S+ QLL RM A ++I F + +A GY+ SYFI VF Sbjct: 460 MSKTYISRILKKYTNQSFLQLLISRRMDIARKMIAEDKFKLYEIAEKVGYNDFSYFIQVF 519 Query: 229 RNYYGMTPTEYQE 241 + YG+TP EY+ Sbjct: 520 KKKYGVTPNEYRR 532 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 108/260 (41%), Gaps = 25/260 (9%) Query: 5 HGNCLIAYARHKYIL-TMVNGEYRYFNGGDLVFADASQIRVDKCV--ENFVFVSRDTLSL 61 HG + Y H + N E N GD++ + + + ++++F L Sbjct: 74 HGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLKPKL 133 Query: 62 FL----------PMLKEEALN-LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAE 110 F P+ +N ++ K ++ H + + + Q + + L E Sbjct: 134 FEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENII--TELYSKE 191 Query: 111 MLRKRA------LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164 M +RA ++F L+ +++ + + ++ T + T ++ N + TL + Sbjct: 192 MCYRRAAEAELIVLFTCLARIYKEQLGLKG-FDEVKNKQVTDIITYMDENFSQA-TLQSV 249 Query: 165 ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 A S L + +++ ++S+++ +++ A + ++ +A G++ SY Sbjct: 250 ADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASY 309 Query: 224 FIYVFRNYYGMTPTEYQERS 243 F VF+ YG +P EY++++ Sbjct: 310 FHKVFKQKYGQSPAEYRKQT 329 >UniRef50_D2LZT6 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT6_BACS4 Length = 512 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 25/191 (13%) Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 L L + +N + VS + + E +L Q ++ K Sbjct: 345 QQRILELLWIVSRLMNEMGVETVSPFYSFQANDYRQLRSETNELLQQ----MRQLYTKHY 400 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L S+FL I + + +L ++A ++ +SP + Sbjct: 401 DQLELDSIFLMKR--------------------YILEHSHEDISLDKLAKKVGLSPIYMS 440 Query: 177 KKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 K +E+ +Y LTECR+++A QL+ SIK + GYH +YF VF+ G++ Sbjct: 441 KLFKEKLGVNYIDFLTECRIEKAKQLLKRPDKSIKEITFDVGYHEPNYFSKVFKKMCGVS 500 Query: 236 PTEYQERSAQR 246 P EY++ R Sbjct: 501 PKEYRKSIFNR 511 >UniRef50_B0MM97 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MM97_9FIRM Length = 283 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 28/255 (10%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM-L 66 C++ Y I N G+L+ K + + T +F+ + Sbjct: 38 CVLIYVIDGCIYVTEGDTDYEVNAGELLILKNGVHHFGK-----KKIQKGTKWIFVHFRI 92 Query: 67 KEEALNLHAHKKVSSLLVHHCSRD----IPVFQEVAQLSQNKNLR-----------YAEM 111 + + S L + + + +P F + K L+ Y + Sbjct: 93 SADCNASPFYPDASPLGAYDATAESILTLPKFLDSVSARFEKELKTFIEYAQSDDAYKKW 152 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + L L S+ + + F L + R+C +++NI ++ I +S Sbjct: 153 FINQRLFLLLSSLAVNTQGFSNNL------TLSDRICRYLSDNIGVPFSSENIEKRFYLS 206 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + ++E + Q RM A +L+ SI +A G+ V YF FRN Sbjct: 207 YKYMSHLFKKEKGVTMQQYHNSVRMDEACRLLCSTLMSIGEIADKLGFSDVLYFSRCFRN 266 Query: 231 YYGMTPTEYQERSAQ 245 Y G +P+ Y++ SA+ Sbjct: 267 YTGKSPSAYRKDSAR 281 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 74/175 (42%), Gaps = 8/175 (4%) Query: 82 LLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP 141 +++ ++ + E AQ + + ++ I ++ E + Sbjct: 362 IILGRLLNEMGLHWETAQDFARFSTVHQVTEHGKSEILHIVRTLQEWRT-------TDEQ 414 Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 ++ ++++ TL +A + +SP + K +E + ++S+ +T+ R++ A Q Sbjct: 415 SLMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEHAKQ 474 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAAS 255 L+ + S+K + GY +YF VF+ G +P++Y++ D+ Sbjct: 475 LLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRKSINGLGPKEDTLNG 529 >UniRef50_A6Q8S4 Transcriptional regulator, AraC family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8S4_SULNB Length = 284 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 17/246 (6%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL--- 63 + ++ + + +G G+++F R V +++ S+D L Sbjct: 46 HAIVYVINGRVEIEDDDGNLTVAETGEIIFMP----RDSYVVSDYLKNSQDLEVFLLFFD 101 Query: 64 -----PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L + L H ++V +L S++I F E Q N L + L Sbjct: 102 HEIALSFLGNKPLKHHTDERVCTL---KSSKNINYFIETLQKMTFTNKSDKAFLTLKILE 158 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 F L V + FI L Q + + +++ + T++ AS MS S K Sbjct: 159 FLHLVVQENEHKFIDTLYASEQYKQKRNISSLMLEHFEKNLTVSDFASLSGMSLSTFNKA 218 Query: 179 LREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 +++ T+ Q L E +M RA L+ G S+ +VA GY +VS FI ++++YG TP Sbjct: 219 FKKQLGTTPKQWLIEKKMNRAHALL-SQGKSVTQVAFDVGYLNVSNFIKAYKSFYGQTPK 277 Query: 238 EYQERS 243 Q+ + Sbjct: 278 SMQKNT 283 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 75/177 (42%), Gaps = 6/177 (3%) Query: 73 LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFI 132 L K+ + V H I + VA + + L +A + L++V + + F Sbjct: 148 LRQMKEHDTKKVQHLDSSIT-RENVAGEPKQNLQKNMLYLNIKAKMLELIAVAYKYDLFT 206 Query: 133 PLLLNVLQPNM----RTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYS 187 + + + +V I + L+ +A + M+ + ++ + + Sbjct: 207 RQVREDREESGTVENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTIT 266 Query: 188 QLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + + R+++A + I +A +CG+ ++ YFI F+ GMTP+EY+++S Sbjct: 267 EYINVIRVEKAATALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKKSK 323 >UniRef50_B7ACV0 Sensor protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7ACV0_9BACE Length = 1324 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 100/254 (39%), Gaps = 19/254 (7%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNG------GDLVFADASQIRVDKCVENFVFV 54 ++S + L AY + V G + D++ + I++ K ++ Sbjct: 1082 LRSFLKDNLAAYYHVDVAIDGVEGRKKAITQQPDIIISDVIMPNMDGIQLLKELKKNANT 1141 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 S + L ++ + L + +E+ L N + K Sbjct: 1142 SHIPIILLTSQVEFSNRIEGLVQGADGYLCKPFNT-----EELMVLITNLIANRVRLKGK 1196 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPS 173 + ++ P+ L + R+ +IN N+++ + + E+ +S + Sbjct: 1197 YS------GSQTQEGKIAPVELQGNDEALMERIMNIINENLSNPNLNVEMLTQEIGISRT 1250 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L ++++E T+ S + R+Q+A L+ SI ++A + G+ S ++F F+ Y Sbjct: 1251 HLHRRMKEMTGTAPSDFIRNLRLQQATVLLENKDLSITQIAYAVGFTSQTHFSSAFKKVY 1310 Query: 233 GMTPTEYQERSAQR 246 G++P EY + + R Sbjct: 1311 GLSPMEYAQSNRNR 1324 >UniRef50_B8FMW7 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMW7_DESAA Length = 342 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 54/104 (51%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199 Q +R+ I +A + MSP L+++L+EE TS+ ++++ + ++A+ Sbjct: 239 QETASSRIVQEIEFRRQGVPGFDDLARHMNMSPRTLRRRLKEEGTSFKNIVSDVQKEKAI 298 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 L+ I+++A+ GY + F F+ + G TP +Y++ + Sbjct: 299 HLLQTTNLPIQQIALELGYEDLPNFYRAFKRWTGKTPGDYRQSN 342 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Query: 84 VHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN 142 V +D P+ E A+ S E L+ + +++ ++ D I + + Sbjct: 122 VFKKIKDQPLDIEAARRSFFNLTHIDHEKLQSVLDMMHIVAKYILDSEMI----RISSLS 177 Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQL 201 ++ I N+ + TL +A + +SP+ L +++ ++ + L R++++ +L Sbjct: 178 SIEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKEL 237 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 I SI ++ G +YF +F+ +G++P Y++ Sbjct: 238 IETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Query: 69 EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLED 128 + A +K+ L+ H R++ +E+ L + + + LR+ + LLS+ + Sbjct: 357 DERQACASEKLMHYLLIHLLREM---RELHMLPREQEEGLWKRLREPMSLKELLSIIVSL 413 Query: 129 EHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETS 185 L+ + + I N++ ++ + IA L +S S + + Sbjct: 414 IEHARSSLSAKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGISSSYFCLLFKNHFGET 473 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + + LT+ RM+ A L+ SI ++ S GY YF VF+ Y GMTP++Y+++ + Sbjct: 474 FVEYLTKQRMEMAKCLLRTSERSIAQIGSSIGYQERRYFTKVFQKYTGMTPSDYRQKESN 533 Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 37/158 (23%) Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL----LKKKLREEETSYSQLL- 190 L+ Q ++ + ++ E EL M P L K+LR E S +LL Sbjct: 356 LDERQACASEKLMHYLLIHLLREM------RELHMLPREQEEGLWKRLR-EPMSLKELLS 408 Query: 191 ------------------TECRMQRALQLIVIH---GFSIKRVAVSCGYHSVSYFIYVFR 229 TE M A I H F I+ +A G S SYF +F+ Sbjct: 409 IIVSLIEHARSSLSAKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGISS-SYFCLLFK 467 Query: 230 NYYGMTPTEYQERSAQRLSN---RDSAASIVAQGNFYG 264 N++G T EY + ++ R S SI G+ G Sbjct: 468 NHFGETFVEYLTKQRMEMAKCLLRTSERSIAQIGSSIG 505 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%) Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQ 188 + + N ++ + I N +A +A + ++ S L +E + + Sbjct: 12 RLLDGVRNKESADVIISIREYIEKNYDDSLNVADLARKYGLNVSYLSTLFKERTGINITS 71 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 + RM++A+ L+ + + VA GY + YF VF+ Y G+TP EY E +R Sbjct: 72 YIEGIRMEKAMNLLRETNWKVTEVAFHVGYSNSGYFSRVFKKYTGVTPGEYGEMEKKRRK 131 Query: 249 NR 250 Sbjct: 132 TP 133 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 16/252 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN------------FV 52 H I Y + + ++GE + D + + ++ Sbjct: 37 HDELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYI 96 Query: 53 FVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVA--QLSQNKNLRYAE 110 D L + + L +++ C R I + ++++ + Sbjct: 97 SFQTDDLMEKSILSPLKRGRLMISPQINDTAADICERLIEINEQISGKNAEKTDAANIEA 156 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 + + + + + N + T I N E +L ++ + Sbjct: 157 QFETKITLIKFIRKMWRNGLILENGTNGTNTT-EKEMITYIRQNYTREISLKEFGAQFHL 215 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S + + +E + SQ + R++ A QL+ S+ VA+ GY +VSYFI F+ Sbjct: 216 SEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASVTEVAMCSGYQNVSYFIRSFK 275 Query: 230 NYYGMTPTEYQE 241 YG++P +Y+ Sbjct: 276 KMYGVSPLKYRN 287 >UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355CA Length = 327 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 15/236 (6%) Query: 24 GEYRYFNGGDLVFADASQIRVDKC-------VENFVFVSRDTLSLFLPMLKEEALNLHAH 76 G+Y Y GDL + C V P+L E++ L Sbjct: 90 GDYLYLGEGDLCITRIEEETPGLCFPTGRYLGITIVLDLGILKDHTPPLLDSESMRLQDF 149 Query: 77 KKV----SSLLVHHCSRDIP-VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHF 131 + L +R I +F E+ Q+ Q Y ++ L+ L + E E Sbjct: 150 GDRFCPGNHFLAIRANRQIDHIFGELYQIPQEFRHDYFR-IKVLELLLFLRMIDPEQERA 208 Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLL 190 + + Q ++ +V I N+ T+ ++A E +SP+ LK ++ T+ L Sbjct: 209 LDRVTR-NQIDIIRQVRRRITQNLQENITIDQLAREYCISPTSLKSNFKQVYSTTIKDYL 267 Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + RM+RA L++ ++ +A S GY + S F F+ YG+ P EY+++ Sbjct: 268 RKVRMERASALLLTTDSTVADIAASLGYTNQSKFSAAFKTVYGLAPAEYRKKCRHE 323 >UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3A6_9CLOT Length = 505 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 4/153 (2%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 V++ ++ L+ +R ++L I +++V ++ H+ L + P + + +I+ Sbjct: 356 VYENISHLNLMDWIR--QLLFTDHYIQIMMNVLMQYRHYHDGLHHNAHP-LVQKALRIID 412 Query: 153 NNIAHEWTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKR 211 E +L IA L ++P L RE ++ T+ R++ A L+ I Sbjct: 413 QGYKGELSLEEIAGSLSVTPEYLSTLFIRELGIKFTTYCTQRRIECAKHLLADPNRKIYE 472 Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 VA GY V YF VF+ Y G++P EYQ+ + Sbjct: 473 VAGESGYGDVKYFCKVFKKYTGLSPGEYQKNQS 505 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 FLE I + + + ++ I + + +L+++A+ +PS L R Sbjct: 379 CFYQFLEVTKQIISVYSNEGSSSIQKMLAYIEEHHSEPLSLSQLANYFHFNPSYLSAYFR 438 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + + +S+ L + R+++A + + I + GY SYF VF+ GM P+ Y Sbjct: 439 QHHDEGFSEYLNKVRIRKAKEWLKSSTIPISEIYALVGYSDHSYFCKVFKKRTGMPPSRY 498 Query: 240 QERSAQRLSN 249 + +A+ Sbjct: 499 RRENAEHHET 508 >UniRef50_A8S8J9 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8J9_9FIRM Length = 351 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 2/140 (1%) Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 AE + I LL E +L V ++ I +++ E T+ +A Sbjct: 210 NAEQSSEEIQIQELL-PQEEHRPQQTGVLPVNPSSVVYPAVVYIRDHLQQEITMKEMADL 268 Query: 168 LLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 +SPS + +E S+ ++ R+Q A +L++ G SI ++A GY ++S+F Sbjct: 269 CHLSPSYFSRTFNKETGESFVNYISSRRIQLAKELLLETGKSISQIAEEVGYDNISHFTA 328 Query: 227 VFRNYYGMTPTEYQERSAQR 246 VF+ G+ P+ Y+ ++ Sbjct: 329 VFKRTEGIPPSVYRSSKKRK 348 >UniRef50_B1JCK3 Transcriptional regulator, AraC family n=16 Tax=Pseudomonas RepID=B1JCK3_PSEPW Length = 353 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLREE 182 L D L + + RV V+ + E +A L +S L+++L+EE Sbjct: 213 AILHDRFAGEYLARFSESRVTHRVRQVLCRILPQGEPKRETLAQALHLSQRTLQRRLQEE 272 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 TS+ LL + R + A Q + G ++ A G+ S F FR ++ +TP+EY+ R Sbjct: 273 GTSFQALLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDVTPSEYRAR 332 >UniRef50_A7V9A8 Sensor protein n=2 Tax=Bacteroides RepID=A7V9A8_BACUN Length = 1303 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 98/241 (40%), Gaps = 19/241 (7%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKE 68 ++ K+ L ++ E D++ + + + ++N + S + L E Sbjct: 1078 VLKATNGKHALNVLEKEDIDLVVSDIMMPEMDGLELCSTIKNDIRYSHIPIILLTAKASE 1137 Query: 69 EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLED 128 E + P EV +L NK + EM KR IF +D Sbjct: 1138 EHQLEGLSVGADDYITK------PFNMEVLKLRINKII---EMNVKRQEIFN------QD 1182 Query: 129 EHFIPLLLNV--LQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKK-LREEET 184 P + + L + + ++ +NI+ E+++ +AS L +S S KK ++ Sbjct: 1183 IKIEPSRITITPLDQQLVEKAIQIVEDNISETEFSVEELASSLNISRSYFYKKMIKITGK 1242 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 + + RM+RA QL+ + +A + GY+S F F+ + ++P+E+ + A Sbjct: 1243 KPIEFIRTIRMKRAQQLLTESQMQVSEIAYTLGYNSPKIFSKHFKEEFNISPSEFIRQQA 1302 Query: 245 Q 245 + Sbjct: 1303 E 1303 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 8/230 (3%) Query: 18 ILTMVNGEYRY--FNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHA 75 I + G Y + GDL + + ++ ++ S+FL + EE Sbjct: 61 IHQTMGGRYYTGLYRRGDLCITPSGFSSGYRAEDDDHYLYVQVSSIFLQRISEEISETGT 120 Query: 76 HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLL 135 K + + ++N + + L +L AL FL + Sbjct: 121 GKVELLPNFQTRDPQVESLLGLLHAEVHRNGQMGQ-LYSESLANALAVSFLRNHASTQPQ 179 Query: 136 LNVLQPNMRTR----VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLL 190 + + + R V I + + + LA +A + +S S ++ ++ + Q L Sbjct: 180 VAQYESGLGDRKLLLVTRYIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYL 239 Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + R++RA QL+ S+ +A+ CG+ S S+F FR GMTP+ Y+ Sbjct: 240 LQQRIERAKQLLKQTQQSLVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 105/259 (40%), Gaps = 13/259 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL----S 60 H + Y ++ ++ GD++ + + + ++ + Sbjct: 40 HPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSIHPIAKEKHITDNFQFHLDM 99 Query: 61 LFLPMLKEEALNLHAHKKVS-SLLVHHCSRDIPVFQEV-------AQLSQNKNLRYAEML 112 L L ++ + +L+ + S + VH +P + ++ L++ ++ + +L Sbjct: 100 LGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKACLFDIFSLAKEESRHFEILL 159 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 + + F L F + ++ INN+ + T+ ++ + S Sbjct: 160 KSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSK 219 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + ++ TS ++ + + R+ +A +L++ I +A G++++S F F+ Y Sbjct: 220 THFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFKRY 279 Query: 232 YGMTPTEYQERSAQRLSNR 250 Y +TP++Y+++ + +R Sbjct: 280 YNLTPSQYRKKYTKPKESR 298 >UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAS3_9FIRM Length = 271 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQL 201 + V + +N + +L ++ L +SP+ L + ++ ++ ++ LTE R+ A +L Sbjct: 161 VMDHVRKYMEDNYMADLSLDSVSEILHISPAYLSAQFKKYQKMNFLDCLTELRINAAKEL 220 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + S VA GY SYF F+ GMTPT+Y++ +A+ Sbjct: 221 LADPFRSAAEVASMVGYEDASYFARAFKKRTGMTPTQYRKEAAK 264 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 9/250 (3%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS---RDTLSL 61 H + Y H M + F GD+V S I + + R + Sbjct: 36 HDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLMVA 95 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN--KNLRYAEMLRKRALIF 119 F L E + + + V + + E +++ + + + L + + +F Sbjct: 96 FSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLSAMF 155 Query: 120 ALLSVFLEDEHFIPLLLNVL---QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 LL V + + ++C + + H L IA E+ M+ S Sbjct: 156 RLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFC 215 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + + ++SQ +T+ R+ A L+ + + G++ + +F+ VF N GM+ Sbjct: 216 SYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMS 275 Query: 236 PTEYQERSAQ 245 PT+Y+++ Sbjct: 276 PTKYRKQYKN 285 >UniRef50_B3CG99 Sensor protein n=4 Tax=Bacteroides RepID=B3CG99_9BACE Length = 1396 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 13/222 (5%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92 D++ + + + + + V ++ + L EE + L+ P Sbjct: 1184 DVMMPEMDGLTLCRKIRQNVNINYLPIILLTARTSEEDNLEGLDTGADAYLMK------P 1237 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 E+ + + +R E LR A ++E + + RV VIN Sbjct: 1238 FSIELLRKTVLNIIRRREQLRN-----AFSGRQNQEEQISIPEVKSPDDRLMERVMRVIN 1292 Query: 153 NNIAHE-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIK 210 N+++ T+ I++E+ +S L +KL+ + QL+ R+++A L+ +I Sbjct: 1293 ENLSNPALTVEMISTEVGISRVHLHRKLKGLTNQTTQQLIRNLRLKQAASLLAGKRHNIT 1352 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDS 252 VA G+ +YF FR YGM+P+EY ER + +D Sbjct: 1353 EVATLTGFAHPTYFATAFREMYGMSPSEYMERHIGQDKTKDG 1394 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 106/269 (39%), Gaps = 26/269 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE------NFVFVSRDT 58 H ++Y V + LV + E N + Sbjct: 79 HDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYIREKTDIVFNILIKRSLV 138 Query: 59 LSLFLPMLKEE-------ALNLHAHKKVSSLLVHHCSRDIP------VFQEVAQLSQNKN 105 +FL M EE +++ + LV HC+ ++ + + Q ++N Sbjct: 139 EKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSLVHGIIREHFDQKLFSQN 198 Query: 106 LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 + A+++ + + L + L+ E +P + + + I NN + TL +A Sbjct: 199 MIIAKLIELFSELSRLFQITLQGESPLPET-----SSNISEILDYIENNYS-SVTLTSVA 252 Query: 166 SELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 SPS + + ++ S++ ++ +++ A + + +++V GY VS+F Sbjct: 253 EHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQVIEIVGYSDVSHF 312 Query: 225 IYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 +F+ YG++P +Y+ +S + + R SA Sbjct: 313 YKIFKQKYGLSPRQYRTQSNKLGAGRHSA 341 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 10/205 (4%) Query: 46 KCVENFVFVSRDTLSLFLPMLKEEALNL-HAHKKVSSLLVHHCSR------DIPVFQEVA 98 K + + D L +K+E ++ + K +++ CS +I V Sbjct: 312 KITDALFDKNPDAAKELLEQMKQEITDIRYPLHKAKIKMINLCSAVFRRFGEIYVSDTAE 371 Query: 99 QLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE 158 + LR ++ +L + E I L + ++ ++ I+ N Sbjct: 372 DMESRFYLRISQSTTLYSLFQVCREMIDETNQVISGRLE--KHDLVDQISRYISANYQSN 429 Query: 159 WTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217 TL IA ++ +S + + + R + + ++ + R+ +A L+ + + +A G Sbjct: 430 ITLQDIADQIHISSAYVSRLFRNKTGITITEAINRARIDQAKLLLGNPEYKVYEIAQMVG 489 Query: 218 YHSVSYFIYVFRNYYGMTPTEYQER 242 + +YF VF Y G +P+EY+ + Sbjct: 490 FEDAAYFTSVFTKYVGCSPSEYRSQ 514 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 80/214 (37%), Gaps = 18/214 (8%) Query: 31 GGDLV-FADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSR 89 G LV F Q+R+ VE ++ D P L E N+ Sbjct: 96 AGHLVGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMD------------ 143 Query: 90 DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149 + V + L L+K+ + + E + + Sbjct: 144 ----YSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALR 199 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFS 208 I+ +++ + L +AS + +SP K ++ + ++ + RM A +L+ +S Sbjct: 200 YIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWS 259 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 I +A + G+ SYF VFR Y +TP Y+++ Sbjct: 260 IASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQ 293 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 90/217 (41%), Gaps = 13/217 (5%) Query: 39 ASQIRVDKCVENFVF--VSRDTLSLFLPMLKEEALN-------LHAHKKVSSLLVHHCSR 89 SQ+ D+ F + ++ ++L + + EE + + +KK+ L++ Sbjct: 295 PSQLTEDEVELLNAFMALDKEKIALLVNKIFEELEDQGDKNSIENVYKKLFDLILTKAKE 354 Query: 90 DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149 PV ++ S +L E + + ++ I + + T Sbjct: 355 ICPVLKDEFAKSMAFSLNMQESNNIEKSLIEFVHYCIDK---IQNVKESRHKKIIKDAIT 411 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFS 208 I N A++ L+ IA +SP+ K +EE S+ L E R+ +A +L++ Sbjct: 412 YIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRINKAKELLLSTNLK 471 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 VA G++ YF +F+ Y G +P++++E + Sbjct: 472 SYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQK 508 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 73/160 (45%), Gaps = 1/160 (0%) Query: 86 HCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRT 145 H + + + ++A + ++ R ++++ K+ + ++ + +E I + N Sbjct: 106 HPNPTLKYYLDLALIEESNRFRGSDLIMKKLIECVMIHLLRHNELSIKDASLQAKHNEID 165 Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVI 204 + I N + + TL ++ + ++ L + ++ S L R++ A +L+ Sbjct: 166 VLQNYIRKNYSKKITLEELSDLVDINKYYLIRLFKQQTGLSPIDYLIHVRLEEAEKLLAK 225 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 ++ ++ G+HS S+F F+ TP++Y++R + Sbjct: 226 SNITVSDISDRVGFHSPSHFSKTFKENNHCTPSQYRKRYS 265 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 88/227 (38%), Gaps = 30/227 (13%) Query: 15 HKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLH 74 HK ++ + G + F+ L D + VDK + L + M + + Sbjct: 327 HKLLIDDIEGFLKVFDEIFLWLMDHYEEDVDKIKSRL-------IELLILMKRNIPYEMK 379 Query: 75 AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPL 134 L+ ++ ++ K L+ + + R++IF++ + Sbjct: 380 GKLDDEKYLI-----------QLLKIDNIKELKNSYLNYIRSIIFSI----------EEI 418 Query: 135 LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 N L + T+ I + L +A E+ MS K +E ++ LTE Sbjct: 419 RKNELN-GLITKALAFIQKHYNENICLNDVAQEINMSYHYFSKFFKESTGKNFVDYLTEL 477 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +++R+ +L+ SIK + GY +YF F+ G+TPT Y+ Sbjct: 478 KIERSKELLKNQSISIKEICYEIGYSDPNYFSKAFKKITGVTPTAYR 524 >UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C05 Length = 511 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 P + R+ ++ + ++ L IA + ++P+ L ++E + + +T+ RM++A Sbjct: 402 SPRIVERIKNIVRDEYRNDIGLEDIAERVNLAPAYLSYLFKKETGANLVKYITDYRMEQA 461 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 +L+ I VA +CGY + YF +F+NYYGMTP +Y+E++ ++ Sbjct: 462 RKLLEEGELKIVLVAKACGYENQPYFNRLFKNYYGMTPRQYREKNGKQ 509 >UniRef50_B5JUK1 AraC-type DNA-binding domain-containing protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUK1_9GAMM Length = 332 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT-LARIASELLMSPSLLKKKLR 180 L FL + L + R+ +I +I + +A +L +SP L+++L+ Sbjct: 208 LVEFLRESPADLLARPAKDESYAGRIRALIGYDIECDLPAFESVAEQLGLSPQTLRRRLK 267 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 EE TSY +L R AL + +SI +A G+ S F F+ + G+TP++Y+ Sbjct: 268 EEGTSYQELKDLIRRDIALHFLNKPQYSIHEIAQKVGFAEPSAFHRAFKKWVGLTPSDYR 327 Query: 241 ERS 243 + Sbjct: 328 QTH 330 >UniRef50_A7M0D3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M0D3_BACOV Length = 1353 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 90/214 (42%), Gaps = 15/214 (7%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92 D++ + + ++N + S + L + +EA S + + DI Sbjct: 1149 DMMMPKVDGLEMCVRIKNNIQTSHIPIILLTARISDEARIESYKAGADSYISKPFNYDIL 1208 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 + + L Q + +++ + + + ++ + + L + ++ Sbjct: 1209 LTRINMLLEQQE--------KRKEIFHKEIEISPQN-----ITITSLDEEFVEKALRLVE 1255 Query: 153 NNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIK 210 N+ + E+++ + +L MS S L +K + + + R++RA QL+ ++I Sbjct: 1256 ENMENPEFSVNNLCDDLGMSRSQLYRKFESITGLTPNDFIRSVRLKRAAQLLRGSSYNIS 1315 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 ++ G++S+ YF F+ +G TPT+Y+ + Sbjct: 1316 EISDRVGFNSIKYFNKYFKEEFGFTPTQYRSNGS 1349 >UniRef50_B3C5Z2 Sensor protein n=2 Tax=Bacteroides RepID=B3C5Z2_9BACE Length = 1382 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 105 NLRYAEMLRKRALIFALLSVFLE-DEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLA 162 R A +L R I +L+S + I LN + R+ +I N+ E + Sbjct: 1240 KSRVANLLEGRKKIASLISSSTHLKQSIIKESLNKIDNEFIERITRIIEENLMDEKIDVP 1299 Query: 163 RIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 IA EL MS S L +K++ S + + + R+++A QL++ ++I +A G +SV Sbjct: 1300 TIAQELSMSYSSLYRKIKALTGMSTGEFIRKLRLRKAEQLLLSGKYNISEIAHQVGLNSV 1359 Query: 222 SYFIYVFRNYYGMTPTEYQER 242 SYF F+ YGM+P+EY ++ Sbjct: 1360 SYFRECFKEEYGMSPSEYIKQ 1380 >UniRef50_A4Y0S8 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0S8_PSEMY Length = 342 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 6/142 (4%) Query: 104 KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLA 162 + L A ++ + LL +H LL + ++ RV ++ +AH E A Sbjct: 203 RALGDAPLIPANPPLQQLLR-----QHAEALLARLPSASLSARVIGLLGEQLAHGEPDRA 257 Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 ++A L +S L+++L EE +Y QLL + R Q A + + +A+ GY S Sbjct: 258 QLARALHLSERTLQRRLAEEGCNYQQLLADTRRQLAERYLREGRLPAAEIALLLGYSEPS 317 Query: 223 YFIYVFRNYYGMTPTEYQERSA 244 F FR + G+ P EY+ + A Sbjct: 318 VFFRAFRQWTGLPPGEYRAQQA 339 >UniRef50_A7VU71 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU71_9CLOT Length = 289 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 13/225 (5%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLK--EEALNLHAHKKVSSLLVHHCSRD 90 D+V + + + ++ +S + L + L K E + LL D Sbjct: 69 DVVMPHTDGLELLRQIKA---ISPEVLIILLSAHKKFEYVHEAIKEQAFDYLLKPTREED 125 Query: 91 IP-VFQEVAQLSQNKNLR---YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR 146 I VF ++ + K Y+EM RK + ++V ++ + + + + Sbjct: 126 IKRVFGRALKVLEEKEKNKALYSEMKRKIKKYGSQITVKAQENSADSS--SEIYTDTMDK 183 Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIH 205 V +N N E L I+S+ +SP L + + + ++ ++ R+Q+A +L++ Sbjct: 184 VIKYVNENYTLEIGLQEISSKFFLSPDYLSTQFKVKTGKNFKDYISNLRIQKAEELLMCS 243 Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 F I VA GY+ YFI VF+N G TP++++E S +R R Sbjct: 244 EFKISEVAELMGYNDSGYFIKVFKNKLGCTPSQFRE-SKRRDDRR 287 >UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL9_9FIRM Length = 254 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQL 201 + + + + TL ++ EL +SP+ L + + + + +TE RM +A Sbjct: 153 LVQKAIQYVEVHYGGRITLKDMSEELHLSPNYLCELFKRHTGKNLMEYVTEYRMMKARNY 212 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + + + VA GY YF F+ YGMTP EY+ + Sbjct: 213 LNHVEYKVSDVAEMVGYKEAKYFSSTFKKMYGMTPLEYRNK 253 >UniRef50_UPI0001851370 two component AraC family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851370 Length = 253 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 144 RTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLI 202 +V + + L IA +S + +K +E + + L + RM++A++L+ Sbjct: 145 MRKVEEYLKEYYHEDIKLQDIADTFYISREYISRKFKEHFHLTITDYLVDLRMKKAMELL 204 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + +A GY YF VF+ + G+TP +Y+++ Sbjct: 205 DRTNLKVYEIAEKVGYVDDKYFRKVFKKFAGVTPNDYRQKDKN 247 >UniRef50_A6KXQ8 Sensor protein n=2 Tax=Bacteroides RepID=A6KXQ8_BACV8 Length = 1340 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 12/212 (5%) Query: 33 DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92 D++ I + K ++ + S + L + S L S Sbjct: 1137 DIMMPVMDGIELCKRIKEDMRTSHIPVILLTAKDSLQDKEEGYASGADSYLTKPFS---- 1192 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 A+L ++ E +K A + AL + + E + L N L ++ +I Sbjct: 1193 -----AKLLHSRINNLLETRKKIASLLALADIQPKQESAVSSL-NKLDNEFLQKITQIIE 1246 Query: 153 NNIA-HEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIK 210 N+ + +A IA ++ MS S L +K++ + S ++ + + +M++ ++L++ ++I Sbjct: 1247 ENLEMEKMDIAFIADKMCMSHSTLYRKIKGLTDMSANEFIRKVKMRKGVELLMSGQYTIS 1306 Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 +A G+ SV+YF F++ YGM+P++Y ++ Sbjct: 1307 EIAYMIGFSSVAYFRQCFKDEYGMSPSDYVKQ 1338 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-E 183 ++D+ L + I+ + + +L +A + ++PS +E+ + Sbjct: 137 LIDDKLINALDRHPQTREPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQ 196 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 ++S+ LT RMQRA +L++ ++ +A CGY + YFI++F+ G TP+ Y++ Sbjct: 197 LTFSEYLTRRRMQRAKELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRKSQ 256 Query: 244 AQR 246 + Sbjct: 257 KGK 259 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 23/258 (8%) Query: 19 LTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL-----SLFLPMLK----EE 69 + G Y+ G ++F DA E + + + F P K Sbjct: 50 VETDEGSYQ-LKKGQIIFLDAGTRHRLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENR 108 Query: 70 ALNLHAHKKVSSLLVHHCSRDIP----VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 AL +K+ S LL+H + EV + S+ + ++L LI Sbjct: 109 ALGNMVNKQASQLLLHDTDDTYQCLRRLILEVDKKSEQTD-FMVQLLLSEYLIRIA---- 163 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EET 184 E + Q R I+ N E ++A IA+ + + P L++ + Sbjct: 164 ---ELAEAKVAEPDQQAYVKRALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGK 220 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S + L R+ +A ++ SI + G +S YF F+ + TP+EY++R Sbjct: 221 SIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 Query: 245 QRLSNRDSAASIVAQGNF 262 + R + I+ Sbjct: 281 YNDNLRRKSEDIIQSAEA 298 >UniRef50_C6CZ56 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ56_PAESJ Length = 519 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 1/150 (0%) Query: 96 EVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNI 155 E+ + K + ++ L F E + + + + + ++ + Sbjct: 369 ELLKWDAQKAAVLFQFETIDDILSWLRRRFFELSELLYVKRQKQKRKLFDNIMAFVDERL 428 Query: 156 AHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRALQLIVIHGFSIKRVAV 214 + TL +A+ +P+ L +EE + +S L E RM R +L+ + +A Sbjct: 429 EQKITLKEVAAHFDFTPNYLGTLFKEETGTLFSDWLNERRMDRVRELLADPCLKVYEIAE 488 Query: 215 SCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 GY ++ YF F+ + GMTP EY+++ Sbjct: 489 RVGYKNIIYFNRQFKQFTGMTPGEYRKKHK 518 >UniRef50_A9KJ06 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJ06_CLOPH Length = 258 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 16/212 (7%) Query: 39 ASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVA 98 + + ++ +N V V + + L E A ++ ++ D +E Sbjct: 36 SGKQALEYVHKNHVDVILTDIRMPLMSGLEIAKEINLFNPDIKVVFMSGFSDFNYMKEAL 95 Query: 99 QLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL----NVLQPNMRTRV----CTV 150 S ++ L K LL+ F + + L +QP+ ++ Sbjct: 96 LHS------VSDYLLKPIRYDELLTCFQRIKEQLDSKLCIKEAEVQPSYYQQIVTTTMNY 149 Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209 I N+ + TL A + MSPS L + ++E+ ++S L CRM++A +L+ + Sbjct: 150 IKENV-KDATLESAAIHVNMSPSYLSRLIKEKSGVNFSTHLLNCRMKKAAKLLRGIEYKQ 208 Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +A GY + F F+ YYG+TP E++E Sbjct: 209 YEIAFLVGYDNPKNFSRAFKQYYGVTPKEFRE 240 >UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUQ5_DESHD Length = 427 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 95 QEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNN 154 ++ + + + M R +I+ + + E I +L + ++ + I +N Sbjct: 277 EQAVTILSSFYKKLENMERVEEIIYFIKQIVDEFLENIFILADKKHLSLVKDARSFILHN 336 Query: 155 IAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 A T+A A L +SPS L + R++ + +++ LT R+++A++L+ FS+K VA Sbjct: 337 HAQPLTIADAAQHLFISPSHLSRLFRQQLDCTFNDYLTRVRVEKAVELLKKPEFSVKDVA 396 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ G+ + S+F VFR Y G+TP Y+ Sbjct: 397 LAVGFQNQSHFAKVFRKYIGVTPLVYRN 424 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 10/245 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRDTLSL 61 + + LI Y VNG GD LV+ + I + + + + Sbjct: 39 IRDHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQADAQDPW-----EYTWV 93 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + + +H S + +++ + + + L ++ Sbjct: 94 GFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFENALEMTGRLYTT 153 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 L++F+ P + + + I+ N ++ T+ IAS + +S S L + + Sbjct: 154 LALFVSAATSKPPQNSA--NSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQS 211 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S + LT+ R+++A L+ SI +A S G+ + YF F G++P EY+ Sbjct: 212 ILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYR 271 Query: 241 ERSAQ 245 + + Sbjct: 272 SKYKK 276 >UniRef50_UPI0001787D2D two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D2D Length = 535 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 11/194 (5%) Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 ++LSL + L + +H K S L V ++ E + S+ N +EM + Sbjct: 342 ESLSLLIRQLLDGDYPSPSHLKHSILYV---LVNLVKASEASIRSEEANNFVSEMEFQIP 398 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQP---NMRTRVCT----VINNNIAHEWTLARIASELL 169 L V + +++ +++ ++ N R+ + + + +L +A Sbjct: 399 ACATLDEVEEKAGYYLNRIIDSIENRRNNKNERIIAMCKAYLAEHYMEDLSLELVAKRFF 458 Query: 170 MSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 SP+ R ++++ L + RM +A+Q++ I +A+S G+ YF +F Sbjct: 459 FSPAYFSSFFRSHTSMTFTEYLLKLRMDKAMQMLEGGNRKISEIALSVGFRDAGYFTRIF 518 Query: 229 RNYYGMTPTEYQER 242 + G++P E++++ Sbjct: 519 KRETGLSPEEFRKK 532 >UniRef50_Q21JI5 Transcriptional regulator, AraC family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JI5_SACD2 Length = 344 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNI-AHEWTLARIASELLMSPSLLKKKLR 180 L FL + + + +V ++ ++ A + +AS+L MS + L++KL+ Sbjct: 223 LLNFLRTAPYHLVTEDPAHIRFADKVRNILKKDVSASMPSSDEVASQLHMSTTTLRRKLQ 282 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + TSY +L ECRM+ A L+ S +A G+ S F F+ + G TP EY+ Sbjct: 283 NDNTSYQRLKDECRMEAAFHLLNCADLSNNEIAQKLGFDEPSAFFRSFKKWTGQTPGEYR 342 Query: 241 ER 242 R Sbjct: 343 AR 344 >UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RPM5_9MOLU Length = 286 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 98/248 (39%), Gaps = 12/248 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + I + + +NG G++ ++ I + +E L + Sbjct: 44 HRSIEILIPLYGSFILWINGNKVKIIAGNIYIINSQDIHAIQAIEGERIYKGYALQIKYD 103 Query: 65 MLKEEALNLH------AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L+E ++ +++++ LL+ I ++ + + + +M L+ Sbjct: 104 YLRESYHDIDKIYFQQPNQQINKLLMAKIIDIINFYESDDPYNNIRVKSHIQM-----LV 158 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 F LL + + + + T++ + NN + ++ IA E +S L K Sbjct: 159 FLLLDNLSKKRIGYLEVKDSKYKDRITKIIKYLENNYQEDLSVKMIADEFGLSEGYLSKL 218 Query: 179 LREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 +E + + L+ R+ A + +V + + +A+ G+ +V F F+ +TP Sbjct: 219 FKESLGATVKEYLSRVRLWHAEEQLVETDYPVIDIAIGNGFPNVKSFNQAFKRKNVITPA 278 Query: 238 EYQERSAQ 245 +Y+E+ + Sbjct: 279 KYREKMRK 286 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 141 PNMRTRVCTVINNNIA-HEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 + I N A E +L +A+ + +SPS +E ++ + LT RM+RA Sbjct: 442 SQVLEEARAFIRENYAKEEISLNTVAARVNISPSYFSSIFSQEMGVTFVEYLTGVRMERA 501 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRL 247 +L++ + GY YF Y+F+ G TP EY+ S +RL Sbjct: 502 KELLMCSNMKTTEIGYEVGYKDSHYFGYLFKKTVGCTPKEYRAGSRERL 550 >UniRef50_C6IY72 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY72_9BACL Length = 413 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Query: 143 MRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + R + + ++ TL +A L SP+ L + +++E T+++ LT+ R++RA + Sbjct: 302 LVRRAKQYMLEHFSNSGLTLEAMAQALQTSPAYLSRMIKQELGTTFNSYLTQLRIRRASR 361 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L++ +I +A GY + YF F+ G++P +Y++ Sbjct: 362 LLIATELTIAEIAEQVGYETQHYFSTAFKRATGLSPLQYRK 402 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 2/205 (0%) Query: 41 QIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL 100 +IR + + + L +F+ + + ++ S L+ + F EV L Sbjct: 231 EIRRSDIDKAKKLLEQLVLQIFIQSKGQLEVIKGRSLELLSFLIRTSTEYGVKFGEVIHL 290 Query: 101 SQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-W 159 S K E + LL+V I + + RV I N + E Sbjct: 291 SDLKLREIDEADTVEKAVLWLLAVGNAFIELIAERNSSEGEGIIDRVVEYIQKNYSSESL 350 Query: 160 TLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 ++ IA +SP+ L + +++ S ++ + + R+++A L+ +I+ VA+ G+ Sbjct: 351 SVKEIARASYLSPAYLGQLFKKKMGYSLTEHINKVRIEQAKLLLRQTEQTIESVAIQTGF 410 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERS 243 SYF VF+ G++P EY+ ++ Sbjct: 411 KERSYFCKVFKKITGLSPNEYRRKN 435 >UniRef50_B5ETV0 AraC-type DNA-binding domain-containing protein n=3 Tax=Aliivibrio RepID=B5ETV0_VIBFM Length = 266 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 104/242 (42%), Gaps = 4/242 (1%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 + N + ++ +G+ N GD + + I K + ++ + Sbjct: 22 PVERNGIFIVTSGQFHYRDRSGDDITLNAGDFLLYSSGDISKIKMTNDNNNFKAQSVVID 81 Query: 63 LPMLKEEAL--NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 + + ++ N AH +S ++D V + + +L + + L A Sbjct: 82 VALFQKFLSYSNAPAHSPCNSDTFIFTAQDTSVVK-LLELLKEQLTNNDNNDTLEFLTLA 140 Query: 121 LLSVFLEDEHF-IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 LLS + + IP + + ++ + +I+ + T+ +A +L MS S LK+KL Sbjct: 141 LLSEMVNKQPCLIPFIQKISVLTTSQQLIRYVEEHISADLTIDMVAPKLGMSASTLKRKL 200 Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + ++ S++ L+ R+ A + + +I +A G+ + ++F F++ G+TP E+ Sbjct: 201 QSDKLSFAHLVKVKRINYAATQLRLTRKTITEIAYDTGFKTAAHFSTSFKSVKGITPKEF 260 Query: 240 QE 241 ++ Sbjct: 261 RD 262 >UniRef50_B6RAA0 Transcriptional regulator, AraC family n=4 Tax=Alphaproteobacteria RepID=B6RAA0_9RHOB Length = 263 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 4/222 (1%) Query: 23 NGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSL 82 NGE G +F S I ++ D +S+ ++ A + + Sbjct: 46 NGELIGSEGDLFIFPPGSIISLENRPLVDADYQADGVSIANTLIDAVYAGQPAAPAATGI 105 Query: 83 LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN 142 V P N E LR+ LL + H L N Sbjct: 106 QVVRGKEHKPEDVLALMKETLANTSLPEALRQH----RLLEPLIWLRHIGVNLSKPDTDN 161 Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202 ++V ++I ++++ W +AS MS + ++ L + ++++L R+++ L L+ Sbjct: 162 PLSKVRSLIETDLSYAWRATDVASHFAMSEATFRRWLAKSGHGFAKVLLHTRLEKGLTLL 221 Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 I +A+ CG+++ S+F F+ +G+ P E + R Sbjct: 222 QSTHEPISNIALDCGFNTPSHFSEAFKKRFGIRPKEIRVREG 263 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 149 TVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGF 207 + N+ E L +A + +PS + ++++S+ L RM++A +L++ Sbjct: 202 EYLENHYMDEINLESVAEKYHFNPSYFSTLFKNTYKSTFSEYLIRIRMEKARELLLTTES 261 Query: 208 SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 ++ +AV GY +YF+ F+ YY MTP EY++ S + Sbjct: 262 RVRDIAVLTGYRDANYFVRAFKRYYEMTPEEYRKMSGR 299 >UniRef50_C9NPJ0 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPJ0_9VIBR Length = 331 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETS 185 + FI + L N ++ T I ++ TL +A + +S L +K E S Sbjct: 206 HSKQFIETVGERLSENNLYKLLTWIKEHLHRPLTLKDLAQKATVSERTLSRKFLAETGES 265 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 +Q L R+ A L+ ++ ++A G+ + S F F+N G+TP++Y++ Sbjct: 266 PNQWLLNARIDAAQALLENSDLNVDQIAYKTGFGTPSNFRARFKNKTGLTPSQYRK 321 >UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 Tax=Enterococcus faecium RepID=C9BAM1_ENTFC Length = 483 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 5/157 (3%) Query: 91 IPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQ-PNMRTRVCT 149 + + +E+ L + L+ E + + + L + L FI + + +V Sbjct: 329 MEIQRELIDLEDEEYLQGIEKIHQAKTVQELQQLLLS---FIKKHQRQKKYSDNVEKVIV 385 Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEET-SYSQLLTECRMQRALQLIVIHGFS 208 +++ + TL ++ L ++ L + ++E S+S L RM++A QL++ + Sbjct: 386 ILHQHYQEPLTLKEVSENLHLNVMYLGQLFKKETKKSFSAYLNHLRMEKAKQLLLHSNQN 445 Query: 209 IKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 I +A GY++ +YF +F+ G +P EY+E S + Sbjct: 446 INEIASEIGYNNTTYFSKLFKKIVGRSPKEYRENSGE 482 >UniRef50_B2HZ04 AraC-type DNA-binding domain-containing protein n=17 Tax=Acinetobacter RepID=B2HZ04_ACIBC Length = 341 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 57/102 (55%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199 + + RV +++N+ H ++ +A L MS LK++L E TS+S L+ E R + A Sbjct: 236 RRRLAMRVRDILSNSEQHYLSIENVAEYLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHAT 295 Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L+ +S++++A GY V+ F F+ + G +P+ +++ Sbjct: 296 SLLSRTDYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRK 337 >UniRef50_UPI0001968F18 hypothetical protein BACCELL_00802 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968F18 Length = 1345 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 24/248 (9%) Query: 12 YARHKYILTMVNGE----YRYFNGGDLVFADA-----SQIRVDKCVENFVFVSRDTLSLF 62 A +++ NG DLV +D + + ++ V ++ + L Sbjct: 1104 LASDFHMMESTNGREALSIVLRQTPDLVISDIMMQEMDGLTLCHKIKQNVNINHIPVILL 1163 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 +EE + ++ + DI +++ R ++ Sbjct: 1164 TAKTREEDNMEGLDMGADAYIIKPFNIDI------------LRKTVINIVKGREMLRNCF 1211 Query: 123 SVFLEDE-HFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLR 180 + E + + + +V +IN NI++ E T+ IA E+ +S L +KL+ Sbjct: 1212 GGSQKQEVKNQMVDMQSTDNKLLDKVMNIINRNISNPELTVEMIAKEIGISRVHLHRKLK 1271 Query: 181 E-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 E S L+ R+++A L++ +S+ VA G+ S++ F F+ YGMTP+EY Sbjct: 1272 ELTNQSTRDLIRNVRLKQAANLLIYKRYSVTEVASLTGFSSITLFSRSFKELYGMTPSEY 1331 Query: 240 QERSAQRL 247 + + + Sbjct: 1332 IGKHSNEV 1339 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQL 201 + + I + + TL +A + +S + + ++E S+ L + R+ +A +L Sbjct: 436 ILRKAIDYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKEL 495 Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + VA G YF +F+ Y GMTP+EY++ Sbjct: 496 LKDVRYKTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYRD 535 >UniRef50_B5CYJ6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYJ6_9BACE Length = 956 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 74/166 (44%), Gaps = 8/166 (4%) Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE------HFIPLLLNVLQPNMRTR 146 VF + + L+ E+ + + S E + L + Sbjct: 787 VFLGLRFYLRRMKLKNEELYADSTELMKMRSYLNEKSVPQAEVRISDMEFAKLDEILLEN 846 Query: 147 VCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVI 204 + + N++ ++ + +A ++ MS S L +KL+ + + + +MQ A +++ Sbjct: 847 ILKAVEENLSEPDFDVQHLAQKVNMSRSTLTRKLKAITGLTPLEYIRRVKMQHACRMLED 906 Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR 250 ++ VA++ GY++ YF F+ YG+TP+EYQ++ +R ++ Sbjct: 907 TRATVNEVALALGYYNRKYFTTCFKEEYGITPSEYQKQQGKRDTSE 952 >UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepID=A8FI25_BACP2 Length = 472 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 15/195 (7%) Query: 61 LFLPMLKEEALN-LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLR--YAEMLRKRAL 117 + LP L ++ + + ++ +L + E A LSQ K L + LR Sbjct: 284 IHLPELADDMMQAMEEGRREDALALFDAFE-----LEGATLSQLKELLILFKSRLRTDWP 338 Query: 118 IFALLSVFLEDEHFIPLLLNVLQP-----NMRTRVCTVINNNIAHEWTLARIASELLMSP 172 IF ++ E L +V + N R I + + TL + A+ + +SP Sbjct: 339 IFT-INTLAECRQCCEHLFDVYEARTQTVNDMERAKRYIKTHFCEQITLEQTAAYVDLSP 397 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + K+ ++ ++ + +T CR+ + +L+ S+K + GY +Y VF+ Sbjct: 398 TYFTKRFKDVTGLTFKEYVTNCRLDKIKKLLKDSSLSLKEITYQAGYTDPNYVSRVFKKM 457 Query: 232 YGMTPTEYQERSAQR 246 G +P EY++++ ++ Sbjct: 458 VGCSPKEYRKQTVKK 472 >UniRef50_C0CKI1 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKI1_9FIRM Length = 388 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 12/242 (4%) Query: 5 HGNC-LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV---FVSRDTLS 60 H C + Y + ++V + GDL F +Q + +N F + Sbjct: 151 HHPCWELTYVDTGEMFSVVEKQKFLLRQGDLAFYGPNQHHIQYAAKNSSVNFFSIAFDME 210 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 L P L + + H ++LL I V+QL + + + L+F Sbjct: 211 LKKPSLLQNQV-FHISHAHAALL-----NRIISESTVSQLYSEELM-ICYLKEFLILLFR 263 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL- 179 L + + L L+ N+ VC + NI T++ IA + +S L Sbjct: 264 TLHSQSQTKPPDSHLKQNLEKNIICEVCNYVEENIFSPVTVSDIAHHVNLSMPYLSALFH 323 Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 ++E + + +++++ ++I ++I +++ GY S+ YF +F++ Y ++P+EY Sbjct: 324 KKEGIRLIEYINNKKLEKSKEMIRSGQYTITQISEMLGYSSIHYFSRLFKSTYSISPSEY 383 Query: 240 QE 241 + Sbjct: 384 AK 385 >UniRef50_A6WTM9 Helix-turn-helix-domain containing protein AraC type n=7 Tax=Shewanella RepID=A6WTM9_SHEB8 Length = 252 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 2/226 (0%) Query: 18 ILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHK 77 I+ +++GE + V Q+ + + FV+R L + + +L Sbjct: 25 IIRVIHGEKSLLWQDESVLVGQGQLLLIPAGSHISFVNRPFLGRYRAVQLLLPHDLPQGI 84 Query: 78 KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI--FALLSVFLEDEHFIPLL 135 S+ V + V + L + A L + L D+ + L Sbjct: 85 LSSTADWRDPMPVQNVSRAVDLAWNALLQSLSLSLADSVQLHYLAALLLSLPDKRSVSWL 144 Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRM 195 Q ++ +++ + A W IA +L MS + L++KL E+TS+ QLL E R+ Sbjct: 145 YGHTQRSVTQAALALMSVSPAAPWQQEEIADKLHMSTASLRRKLALEDTSFRQLLVEVRL 204 Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L ++ G + +VA++CGY S F F+ +G+TP Y+ Sbjct: 205 SHGLAMLQNSGEPLLQVALACGYQSAEKFSLRFKQQFGLTPAAYRR 250 >UniRef50_A4XWL1 Transcriptional regulator, AraC family n=5 Tax=Bacteria RepID=A4XWL1_PSEMY Length = 364 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%) Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 L FLE L ++ +++ ++ + L ++A +L SP L++ LRE Sbjct: 242 LKQFLEHSPADLLARPDGGDSLISQIRRLLGRDCRTWPDLEQVAQQLHTSPQTLRRHLRE 301 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 E TS+ +L R A+ + +I +A G+ S F F+ + G+TP Y+ Sbjct: 302 EGTSFQELKDHLRRDLAIYHLGRDELAIHDIAEQLGFSEPSAFHRAFKKWTGLTPGAYRA 361 Query: 242 RSA 244 + Sbjct: 362 QEG 364 >UniRef50_C6D789 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D789_PAESJ Length = 547 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 1/105 (0%) Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQ 200 + ++C IN ++ + +L R+A +PS L + + E + S+ + CR++RA + Sbjct: 442 TVIDKICHYINEHLNEDLSLVRLAEINYFNPSYLSRFFKLECGVNLSEYIDNCRVRRAKE 501 Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 L+ ++ VAV GY + F F+ GMTP EY++ Q Sbjct: 502 LLKEDELKVREVAVEVGYEAAHSFTRFFKKATGMTPQEYRDALTQ 546 >UniRef50_UPI0001787EAA two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAA Length = 447 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 5/148 (3%) Query: 99 QLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNN 154 QL + + ++ + ++ A + E E I L + ++ ++ R+ I + Sbjct: 298 QLHALRTMLHSRAALGQEMVVADIEKAKEHEAMIHGNSQLRQDDMKFDVIDRIHRYILEH 357 Query: 155 IAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVA 213 I+ + +L IA E+ +PS L + ++ + + + +M+ AL L+ ++ +A Sbjct: 358 ISGDVSLTAIAEEVHFNPSYLSRYYKQLTGQNLLEYIQAKKMEGALHLMQHTNMKLQEIA 417 Query: 214 VSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 V G+ S SYF F+ G+TP EY+ Sbjct: 418 VRLGFESPSYFTTFFKKKMGVTPQEYRN 445 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 2/182 (1%) Query: 71 LNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI-FALLSVFLEDE 129 L + + + L +R + + E + K M+ A+ L++ + Sbjct: 105 LIIGQFRTRDAGLDKEYARKLALLCETEPDALYKKYHSQPMIGTEAVEGIKLIAGMINSR 164 Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQ 188 + ++ + +V IN NI+ L IA + MS + L + + + Sbjct: 165 LLDEKVFSLEYHEVIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITD 224 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 + E R+ A LI SI +A G+ +YF VF+ GMTP EY++R Sbjct: 225 YIQERRVSAACFLIRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYRQRWKNGDI 284 Query: 249 NR 250 Sbjct: 285 EE 286 >UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM Length = 527 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 69/143 (48%), Gaps = 2/143 (1%) Query: 101 SQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT 160 S+ ++ + L +F L ++ +N + ++ V I+ + + + + Sbjct: 386 SEERDELITKSLDAVPYMFNYLRYLIQRAVEYNSFINE-KDSVVDIVLNYIHQHYSEDIS 444 Query: 161 LARIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 +A + ++P L + + + +TS +T R+++A +L++ + VA+ GY Sbjct: 445 RTMLADMVYLNPDYLARLFKKQTQTSIINYITTYRLEKAKELLLNPDIPVGTVALKVGYG 504 Query: 220 SVSYFIYVFRNYYGMTPTEYQER 242 + SYF +F++ G TP EY+++ Sbjct: 505 NYSYFSKLFKDVVGCTPNEYRKK 527 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 + ++ + + N E TL I+ +S + ++ ++E + L R+++A Sbjct: 434 EHSIMRDIARYMEQNYNREVTLQDISERFYLSREYISRRFKQEMGENVFDYLGRIRVEKA 493 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L+ I ++A GY YF VF+ + G +P +Y++ Sbjct: 494 KLLLQNPNLKIAQIAEMVGYDDDKYFSKVFKKFEGQSPNQYRK 536 >UniRef50_C4T4E3 AraC-type DNA-binding domain-containing protein n=3 Tax=Yersinia RepID=C4T4E3_YERIN Length = 269 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 4/209 (1%) Query: 34 LVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSR-DIP 92 ++F +++ + E + S D + L +L+ A + C DI Sbjct: 59 ILFPAGAEVSIANTPERGHYCS-DMVYLPQSLLRRFRHWYGALAVTPAPAPSLCVPLDIH 117 Query: 93 VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152 L N + L + A + LL+++L + + LL + +V V+ Sbjct: 118 TRLAWDSLLLNVKGHAPDALLQHAAMGVLLALYLAGQAGV--LLIDRRDKWAEQVQQVLL 175 Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRV 212 + A W+++ +A L + S L++KL +E+ S+ +L E RM AL + SI + Sbjct: 176 LDPARNWSVSDVARSLHIGDSTLRRKLMQEDRSFRMILEEVRMGCALHALQTTSLSIGEI 235 Query: 213 AVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 A GY S S F F+ ++G+TP +E Sbjct: 236 AAQHGYISPSRFTSRFQQHFGLTPRRLRE 264 >UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIX4_BACSK Length = 765 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 17/169 (10%) Query: 91 IPVFQEVAQLSQNKNLRYAE--MLRKRALIFALLSVFLED--------EHFIPLLLNVLQ 140 + + + QL Q LR+ + +L + L L++ ++ PLL Q Sbjct: 593 MRLLNRMLQLYQQSGLRHDQGVLLPEGTLYQECLTIPSQEQMKNWFVSRLIDPLLSAFKQ 652 Query: 141 PN------MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193 + + ++ I+ + TL + A++L + + L +E ++S+ L + Sbjct: 653 VSESQFQHLSEKMIDYIHQHYHQAVTLEQCAADLHYNANYLSSVFKEGTAMTFSEYLAQY 712 Query: 194 RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 R+++A + + +K +A GY++ FI F+ GMTP +Y+++ Sbjct: 713 RLKKAKEWLAKTSEPVKTIAEKLGYNNSQNFIRSFKKMTGMTPGQYRQQ 761 >UniRef50_B7CDP9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDP9_9FIRM Length = 389 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 18/249 (7%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + Y H + T V+G+ DL+ Q + ++ S T++ + Sbjct: 151 HDYYELTYIDHGTLDTTVDGQKYRLQKYDLILYYPGQFHT-QSTDDQSTCSYLTITFDM- 208 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDI-PVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 L K V H +DI V E + Q+ +EM+ +L Sbjct: 209 -----DNKLPGDLKNR---VFHTHKDIYQVLSEFMKFIQSDGHLNSEMVLLYLKQILILL 260 Query: 124 VFLEDEHFIPL------LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 +DE + + + + INNN+ ++T+ + + +S S L+ Sbjct: 261 YQFDDESQEQQSITANPMQEHYESTLLNEILVFINNNVYKQFTVEDLCMKFSISRSSLQN 320 Query: 178 KLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 + + Q ++ ++ +A +I H +I ++ G+ S+ YF F+ YG++P Sbjct: 321 LFKSNIHITPKQYISNVKLNQAKIMIHEHNQTISEISDILGFTSIHYFSRKFKLQYGISP 380 Query: 237 TEYQERSAQ 245 T+Y + +Q Sbjct: 381 TDYAKSISQ 389 >UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY2_9CLOT Length = 252 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 1/137 (0%) Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 E + +AL + S + E + +P + RV +++ I+H+ T +IA + Sbjct: 114 EFVISQALEHSKKSHYQEQVLGSLYPADSQEPGVVHRVKEIVSQFISHDLTREQIAELVH 173 Query: 170 MSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 ++P L ++E + S+ + R+ A L+ + +A GY VSYF VF Sbjct: 174 LAPDYLSHLFKKETGVTLSEYIASQRLTMAKYLLAQTSLPVSSIADKVGYSYVSYFNRVF 233 Query: 229 RNYYGMTPTEYQERSAQ 245 + YGMTP EY+ + Sbjct: 234 KKAYGMTPVEYRRSEKK 250 >UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7W7_9FIRM Length = 334 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 13/246 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 Q + + Y +H I ++ + + G ++ S++ E F+ + D Sbjct: 78 QKKRQDYQLLYVKHGTIYYYIDKKQYSISAGGILIYKPSEL---LHYEFFLKDAPD--IY 132 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHH---CSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 ++ + N+ +S+ C +F ++ N+ L + ++ L+ Sbjct: 133 WVHFTGDNVDNILGELNLSTKHAFMGTICPEYDTIFDKIISELLNRKLHFMDI--SSILM 190 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 LL D ++ + +V + N N ++ ++ IA EL S S L K Sbjct: 191 LELLYTISRD-ICTITYISSKNDLILEKVLEIFNTNYPNKISITSIAKELNYSSSWLSKT 249 Query: 179 LREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + S LT R+++A +++ SI++VA G+ YF VF N G+TP+ Sbjct: 250 FTKHFGLSPKAYLTNLRIEKAKSMLLST-MSIRQVAEQTGFPDQMYFSRVFTNAEGITPS 308 Query: 238 EYQERS 243 +Y+++ Sbjct: 309 QYRQKH 314 >UniRef50_C6JDJ0 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDJ0_9FIRM Length = 517 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 Y+E+ ++ A + + F E + + + + I + E +L +IA+ Sbjct: 387 YSELKKRSAELIKNIIAFRE-------IADSQETDPLDESRRYIEEHYQDEISLEQIAAL 439 Query: 168 LLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 + S ++ S+S+ L++ RM++A L+ ++++A+ GY +YF Sbjct: 440 YHFNASYFSTLFKQRFGISFSEYLSDIRMEKAENLLKTSSDKVRKIALEVGYKDPNYFNR 499 Query: 227 VFRNYYGMTPTEYQER 242 F+ + MTP E+++R Sbjct: 500 AFKKRHNMTPEEFRKR 515 >UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D691_9CLOT Length = 253 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIV 203 R I+ E TLA +A E+ M P+ ++ SY LT RM++A +L+ Sbjct: 151 KRAMEYIDRYFYQELTLAGVAKEVHMHPNYFGNLFKKKTGVSYLTYLTSVRMEKARELLD 210 Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 + V GY+S +F VF+ + MTP EY++R+ Sbjct: 211 NPNLKVYEVGQIVGYYSPKHFSKVFKKHTNMTPNEYRDRNKH 252 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 120 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRA 198 + + V I N+ + L +A+E +SP+ L +K + S L + R+ A Sbjct: 375 RSEIVDNVIRYIKNHYKEDINLNVLANEFFLSPAYLSRKFSQTTGVSIMSYLEDYRINVA 434 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 L+ SI +A GY+ +YF +F+ G+TP E+++ S Sbjct: 435 TDLLKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEFRKMSK 480 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 120 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 2/105 (1%) Query: 141 PNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKL-REEETSYSQLLTECRMQRA 198 N+ I +N HE +L +ASE+ +S S +E ++ + LT+ RM +A Sbjct: 437 DNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRMDKA 496 Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 QL+ G +A G+ YF +F+ G TP EY+ RS Sbjct: 497 KQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNRS 541 >UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302 RepID=D1QQ68_9BACT Length = 291 Score = 120 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 4/237 (1%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKE 68 L+ + + + E R GD + +N + S + + Sbjct: 58 LLYITAGEGVFKSSSVEERRIKAGDFFLLFPGEWHTYHPSKNIGWQSY-WIGFKGENMDA 116 Query: 69 EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLED 128 N V + R ++ +Q + + L ++ L+ + Sbjct: 117 RVKNGFLSPTKPVYHVGYMDRLEDLYHYALDTAQEEAVHTQRTLA--GVVNLLIGMMYSL 174 Query: 129 EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYS 187 E I L N NM R I + T+ +IA+++ +S S +K +E S + Sbjct: 175 ERNIELGKNQEHVNMVNRARKRIREALEENLTIQQIATDMGVSYSNFRKLFKEFTGVSPA 234 Query: 188 QLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 E R+QRA +L+ S+K++A + S YF F+ + P+E++E++ Sbjct: 235 LYQQELRLQRAKELLSTTNLSVKQIAYKLCFDSPDYFSAKFKAKINLRPSEFREQTK 291 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax... 294 3e-78 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 196 7e-49 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 195 1e-48 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 194 2e-48 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 187 3e-46 UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glut... 186 6e-46 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 186 9e-46 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 185 9e-46 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 185 1e-45 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 185 2e-45 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 185 2e-45 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 184 3e-45 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 183 5e-45 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 183 5e-45 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 183 6e-45 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 182 1e-44 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 181 3e-44 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 180 4e-44 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 180 5e-44 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 180 5e-44 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 180 6e-44 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 179 8e-44 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 179 1e-43 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 178 1e-43 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 178 1e-43 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 178 2e-43 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 177 5e-43 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 176 9e-43 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 175 1e-42 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 175 1e-42 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 175 2e-42 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 174 2e-42 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 174 2e-42 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 174 3e-42 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 174 3e-42 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 173 4e-42 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 173 5e-42 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 173 6e-42 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 173 8e-42 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 173 8e-42 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 172 1e-41 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 172 1e-41 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 172 1e-41 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 172 1e-41 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 171 1e-41 UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=C... 171 2e-41 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 170 4e-41 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 170 4e-41 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 170 4e-41 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 170 5e-41 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 170 6e-41 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 169 7e-41 UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronoba... 169 8e-41 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 169 9e-41 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 169 1e-40 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 169 1e-40 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 168 1e-40 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 168 2e-40 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 168 2e-40 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 168 2e-40 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 168 2e-40 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 168 2e-40 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 168 2e-40 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 167 3e-40 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 167 4e-40 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 167 4e-40 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 166 5e-40 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 166 5e-40 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 166 5e-40 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 166 5e-40 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 166 6e-40 UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=C... 166 6e-40 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 166 8e-40 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 166 8e-40 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 166 9e-40 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 166 1e-39 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 166 1e-39 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 165 1e-39 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 165 1e-39 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 165 1e-39 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 165 2e-39 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 165 2e-39 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 165 2e-39 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 165 2e-39 UniRef50_A4ARE0 Putative AraC-family transcriptional regulator n... 165 2e-39 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 165 2e-39 UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment)... 165 2e-39 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 164 2e-39 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 164 2e-39 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 164 2e-39 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 164 3e-39 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 163 5e-39 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 163 5e-39 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 163 6e-39 UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostri... 162 9e-39 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 162 9e-39 UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi... 162 1e-38 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 162 1e-38 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 162 1e-38 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 161 2e-38 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 161 2e-38 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 161 2e-38 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 161 2e-38 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 161 3e-38 UniRef50_Q5E3W4 Transcriptional regulator, AraC family n=1 Tax=V... 161 3e-38 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 160 3e-38 UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C... 160 4e-38 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 160 4e-38 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 160 4e-38 UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1... 160 4e-38 UniRef50_A6LE78 Putative transcriptional regulator n=6 Tax=Bacte... 160 5e-38 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 160 5e-38 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 160 6e-38 UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V... 160 6e-38 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 160 6e-38 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 160 7e-38 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 159 7e-38 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 159 7e-38 UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Ta... 159 8e-38 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 159 8e-38 UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori... 159 8e-38 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 159 9e-38 UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostri... 159 1e-37 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 158 1e-37 UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri... 158 1e-37 UniRef50_A1ZWA4 Activator protein MtlR n=1 Tax=Microscilla marin... 158 1e-37 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 158 1e-37 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 158 1e-37 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID... 158 2e-37 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C6PB97 Transcriptional regulator, AraC family n=1 Tax=T... 158 2e-37 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 158 2e-37 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 158 2e-37 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 157 3e-37 UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein ... 157 3e-37 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 157 3e-37 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 157 3e-37 UniRef50_A4ATE5 Transcriptional regulator n=1 Tax=Flavobacterial... 157 3e-37 UniRef50_C6VNM4 Transcription regulator n=3 Tax=Lactobacillus pl... 157 3e-37 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 157 4e-37 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 157 4e-37 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 157 4e-37 UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 157 4e-37 UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Ba... 157 4e-37 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 157 5e-37 UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=P... 156 5e-37 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 156 6e-37 UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicu... 156 6e-37 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 156 6e-37 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 156 7e-37 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 156 7e-37 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 156 8e-37 UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebur... 156 9e-37 UniRef50_C0ECP0 Putative uncharacterized protein n=1 Tax=Clostri... 156 1e-36 UniRef50_UPI0001C35856 AraC family transcriptional regulator n=1... 155 1e-36 UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostri... 155 1e-36 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 155 1e-36 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 155 1e-36 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 155 1e-36 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 155 2e-36 UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero... 155 2e-36 UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID... 155 2e-36 Sequences not found previously or not previously below threshold: UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 181 3e-44 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 175 2e-42 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 168 2e-40 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 168 2e-40 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 167 3e-40 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 166 6e-40 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 165 1e-39 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 165 1e-39 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 165 2e-39 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 165 2e-39 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 164 3e-39 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 164 3e-39 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 163 4e-39 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 163 4e-39 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 163 5e-39 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 163 5e-39 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 163 6e-39 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 163 6e-39 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 163 7e-39 UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria Re... 162 1e-38 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 161 1e-38 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 161 2e-38 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 161 2e-38 UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=E... 161 2e-38 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 161 2e-38 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 161 3e-38 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 160 3e-38 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 160 4e-38 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 160 5e-38 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 160 5e-38 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 160 7e-38 UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=C... 159 7e-38 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 159 7e-38 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 159 8e-38 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 159 9e-38 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 159 1e-37 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 159 1e-37 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 159 1e-37 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 159 1e-37 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 158 1e-37 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 158 1e-37 UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1... 158 2e-37 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 158 2e-37 UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot... 158 2e-37 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 158 2e-37 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 158 2e-37 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 158 2e-37 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 158 2e-37 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 158 3e-37 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 157 3e-37 UniRef50_UPI0001788C94 transcriptional regulator, AraC family n=... 157 3e-37 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 157 3e-37 UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=C... 157 3e-37 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 157 3e-37 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 157 4e-37 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 157 5e-37 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 156 5e-37 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 156 5e-37 UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=P... 156 5e-37 UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,... 156 6e-37 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 156 6e-37 UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transfera... 156 6e-37 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 156 7e-37 UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC ... 156 8e-37 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 156 8e-37 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 156 8e-37 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 156 9e-37 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 156 9e-37 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 156 1e-36 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 156 1e-36 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 155 1e-36 UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1... 155 1e-36 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 155 1e-36 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 155 1e-36 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 155 1e-36 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 155 2e-36 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 155 2e-36 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 155 2e-36 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 155 2e-36 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 155 2e-36 >UniRef50_Q9EYV5 HTH-type transcriptional regulator gadX n=60 Tax=Bacteria RepID=GADX_ECO27 Length = 274 Score = 294 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 256/274 (93%), Positives = 260/274 (94%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS Sbjct: 1 MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 LLSVFLED FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274 ERSAQ L N AAS+ AQGNFYGTDRSAEGIRL Sbjct: 241 ERSAQELPNCGPAASMAAQGNFYGTDRSAEGIRL 274 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 13/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I + + V+ E G+ V Q+ + + + Sbjct: 84 HWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAM-EYENIIFL 142 Query: 63 LPMLKEEALNLHAHKKVSS---------LLVHHCSRDIPVFQEVAQLSQNK--NLRYAEM 111 ML +L + + L + D F E + YA Sbjct: 143 PSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLCGKKNYAYQ 202 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + + +F L + R+ + + + T+ A S Sbjct: 203 MGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELCFYS 262 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 S K ++ + Q L E R+++A +++ + VA CG+ ++SYF +FR Sbjct: 263 NSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLFRR 322 Query: 231 YYGMTPTEYQER 242 YG TP EY++ Sbjct: 323 KYGKTPGEYRKN 334 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 14/251 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + + V+ + GD++F Q+ +N + + + Sbjct: 44 HWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIM-EYENILFK 102 Query: 63 LPMLKEEALNLHAHKKVSSLLV----------HHCSRDIPVFQEVAQLSQNKNLR-YAEM 111 +LK +L K + L + PV + ++ +LR YA Sbjct: 103 SSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQ 162 Query: 112 LRKRALIFALLSVFLEDEHFIPL-LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 L +A +F +L + + + +N + + I NN + IA+ Sbjct: 163 LSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFY 222 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S K +E S+ Q L + R++ A +L+ +I +A + G++++SYF F+ Sbjct: 223 SKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFK 282 Query: 230 NYYGMTPTEYQ 240 YG++P +Y+ Sbjct: 283 KKYGVSPRKYR 293 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 16/257 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + V+ + G+ +F ++ ++ V S D + Sbjct: 36 HWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVV-GGKPCSFDAVVFH 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCS----------RDIPVFQEVAQLSQ-NKNLRYAEM 111 + +++ + +S +L + + + Q+ + ++N + A Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASEL 168 L + L+F++L+ + + + R V I N A L ++A Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELA 214 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MS S + + S + + R+Q+A + I VA+ G++S+SYF V Sbjct: 215 RMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTV 274 Query: 228 FRNYYGMTPTEYQERSA 244 FR +G TP EY+ R Sbjct: 275 FRQRFGCTPREYRSRLQ 291 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 93/247 (37%), Gaps = 10/247 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR------VDKCVENFVFVSR 56 H I Y +N + Y GD+ ++ + ++ SR Sbjct: 36 HYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSR 95 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKR 115 DT++ FL + EA + ++ + + ++ + + ++ Sbjct: 96 DTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLL 155 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 I +L E L + R +N + TL ++A+ MSP+ Sbjct: 156 HQILVVLGRCQEARREGHALEEAEEA--MVRAARYMNQHYQEGVTLGQVAAFANMSPTYF 213 Query: 176 KKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 KK + + + L R+Q+A ++ S+ VA++CG+ +YF VFR G+ Sbjct: 214 SKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGV 273 Query: 235 TPTEYQE 241 +P EY++ Sbjct: 274 SPREYRK 280 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 89/248 (35%), Gaps = 9/248 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 +H I Y + ++ F GDLV + + + R +S Sbjct: 28 HVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMH-ERIVISFR 86 Query: 63 LP-------MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 +E + V ++ + + ++ + + + ++ Sbjct: 87 NEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKVG 146 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 + L + ++ + + + V T I + A +L +A + +S S L Sbjct: 147 LIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYL 206 Query: 176 KKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 KK + + + + R+Q A L++ SI +A CG++ +YF FR G+ Sbjct: 207 SKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGI 266 Query: 235 TPTEYQER 242 +P +Y++ Sbjct: 267 SPHKYRKN 274 >UniRef50_B7LQH5 HTH-type transcriptional regulator gadX for glutamic acid decarboylase and transporter (GadA, gad BC) (AraC/XylS family) (Modular protein) n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH5_ESCF3 Length = 289 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 114/255 (44%), Positives = 172/255 (67%), Gaps = 3/255 (1%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC--VENFVFVSRDTLSLFLPML 66 +I + ++ ILT +G G+L+F D Q+ + +EN +++ T+SL + L Sbjct: 24 VIICSINETILTFNDGNKITIAPGNLIFVDPRQLTITHYGELENVALITQKTISLLVSAL 83 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFL 126 ++L +H++K +S + DI +F+ A LS +L AE LRKR+L+ AL+S+FL Sbjct: 84 NSDSL-IHSYKAHNSPFIIRKCPDIAIFKYAANLSHKSDLSCAEKLRKRSLMLALMSLFL 142 Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSY 186 +D++FIPLL+ +L P++ TRVC VIN+NIA++W+L IASELLMSPSLLKKKL+ E+T+Y Sbjct: 143 DDQNFIPLLMRILHPDITTRVCAVINSNIANDWSLTLIASELLMSPSLLKKKLQAEQTTY 202 Query: 187 SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 SQLLTECRMQ+AL+L+ +++K+ A+ CGY SVSYFI VFR ++G+TPTEYQ++ Sbjct: 203 SQLLTECRMQQALKLLRCDDYAVKKTAILCGYKSVSYFIAVFRKHFGITPTEYQDKRQHH 262 Query: 247 LSNRDSAASIVAQGN 261 + + GN Sbjct: 263 HDLNATKRVMTLPGN 277 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 13/251 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + + + L V GD+ + + E + + Sbjct: 37 HWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRM-EYENIIFE 95 Query: 63 LPMLK------EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ----NKNLRYAEML 112 +L E L SL V D+ Q A L + N+ R L Sbjct: 96 PELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYEL 155 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 + + L++ + L V ++ + A +A A S Sbjct: 156 LVKGALLRFLALLIAQGRQC-LSTETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSA 214 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S + R+ S+ L E R+ A + + ++ +A CG+ ++SYF F+ + Sbjct: 215 SHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAH 274 Query: 232 YGMTPTEYQER 242 +GMTP +Y+++ Sbjct: 275 FGMTPRDYRKK 285 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 101/252 (40%), Gaps = 14/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + L VN N GD+VF Q+ +++ + + + Sbjct: 39 HWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSI-SQKDYSIMEYENILFK 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV----------FQEVAQLSQNKNLR-YAEM 111 +LK +L K + LL + + + + + ++ + + R YA Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 112 LRKRALIFALLSVFLEDEHFIPL-LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 L ++ +F + + + + + ++ + + + + ++ IA Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S K +E S+ Q L + R++ A +L+ I +A++ G+ ++SYF F+ Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 230 NYYGMTPTEYQE 241 YG+TP +Y++ Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H I Y +L ++ EY G+ +F D + N S + Sbjct: 38 SHWHKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGNEG-CSFCAMVF 96 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHC-----------SRDIPVFQEVAQLSQNKNLRYAE 110 + ML + +L + R + +E+ LS++K Y Sbjct: 97 DVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEA 156 Query: 111 MLR--KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 ++ ++F S ++ + +V I ++ L+ +A + Sbjct: 157 AIKGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILYIQSHYHRPIRLSELADLI 216 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MS + + + + R+++A +L+ I +A+ G+ +SYF+ V Sbjct: 217 PMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHISYFVRV 276 Query: 228 FRNYYGMTPTEYQER 242 FR TP+EY+++ Sbjct: 277 FRKIMNCTPSEYRKK 291 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 16/256 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y + V+ Y GD++ I E + + + Sbjct: 39 HWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSM-EYENILFS 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHH------CSRDIPVFQEVAQLSQNKNLRYAEM----- 111 + M + + + + LL +D P++ +++ + +E Sbjct: 98 VDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYH 157 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASEL 168 L + F V + + R + + I+ N ++ IAS Sbjct: 158 LALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYC 217 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 S S + + S+ L + R+ A +L+ + S+ VA +CG+ ++SYF + Sbjct: 218 GFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRM 277 Query: 228 FRNYYGMTPTEYQERS 243 F+ YG+TP+ Y+E Sbjct: 278 FKKKYGVTPSRYRETH 293 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 5/237 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI + V G GDL A +Q+ E + + Sbjct: 39 VRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPW-EYYWVGFNG 97 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 + VHHC V + + + ++ ++ ++ Sbjct: 98 ACANKLVQQTPFSDLH---PVHHCKDPQAVREALYNIYLSRGPEPQCEALMTGYLYIFMA 154 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE- 182 +++ + I N +H+ ++ IA + +S S L + Sbjct: 155 HLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANV 214 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S LT R+ A L+ SI +AVS G+ YF VF+ G+ P++Y Sbjct: 215 GQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 5/237 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI + V G + GDL FA SQ+ E + + Sbjct: 39 IRDHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQQPW-EYSWVGFNG 97 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 + A L VHH S + + + ++ L+ + ++ ++ Sbjct: 98 ACAHKLAAQLPFTDDA---PVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLFIA 154 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-EE 182 + + I N +H+ ++ +A + +S S L + Sbjct: 155 ALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLNV 214 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S LTE R+ A +L+ SI VAVS G+ YF VF+ G+ P++Y Sbjct: 215 GKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 96/243 (39%), Gaps = 8/243 (3%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN--FVFVSRDT 58 +Q H C I Y ++ G+ GDLV + + ++ + Sbjct: 36 IQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAI 95 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 +P L L+ ++ +S + +E+ Q + ++ Y E+ + L+ Sbjct: 96 RDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDI--YLRELLQETSSQIEFYQEI--SQGLV 151 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 ALL + + P L ++ ++ N TL ++ + +S L Sbjct: 152 SALLVLVMRLIRINPEDEAALSQEC-QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHL 210 Query: 179 LR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + + S + LT RM++A +L+ + V+ + GY + YF VF+ YG++P Sbjct: 211 FKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPV 270 Query: 238 EYQ 240 +Y+ Sbjct: 271 KYR 273 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 7/246 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + +N R GD++ ++ + + +SL Sbjct: 36 HWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPYDCVYECLVFPVSLL 95 Query: 63 LPM-LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLS-QNKNLRYAEMLRKRALIFA 120 E LN + + D + + +L ++ L+ L++ Sbjct: 96 SSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQ 155 Query: 121 LLSVFLEDEHFIPL----LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + + L+D + L + V I + + TL +A MS Sbjct: 156 FMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFC 215 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 E + + R++RA L+ G SI +A+ CG++ VSYF F+ Y G++ Sbjct: 216 HFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGIS 275 Query: 236 PTEYQE 241 P +Y + Sbjct: 276 PGQYLK 281 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 106/276 (38%), Gaps = 14/276 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN-----FVFVSRD 57 H I I ++ + G++ +I + +EN + ++ Sbjct: 27 HWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQIIQINYK 86 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 + P L + + + ++ S + E+ +N Y + Sbjct: 87 FMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGYE--FHVISA 144 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPN-----MRTRVCTVINNNIAHEWTLARIASELLMSP 172 I+ + + + + + L+ N ++ I N +E + +A L ++ Sbjct: 145 IYKVFGSIISNVPYTISTEDELEKNNITFNRMKKIIEYIEQNYMNEININTLAEILHLNK 204 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + ++ S Q +T RM +A +L++ + SI + +SCG+ ++ YF VFR Sbjct: 205 YYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKVFREV 264 Query: 232 YGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDR 267 Y +P EY + + Q SN+ S V QG Y T++ Sbjct: 265 YKCSPLEY-KNNRQERSNKKVHESEVYQGYIYYTNK 299 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 13/252 (5%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 + H I Y V+G+ + +F + I K +N + Sbjct: 35 LPHWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDN---PEPYAIV 91 Query: 61 LFLPMLKEEALNLHAHKKVSS-----LLVHHCSRDIPVFQEVAQLSQN-KNLRYAEMLRK 114 L ML E ++ K + S LLV + D + ++ + K L Sbjct: 92 FSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLV 151 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRV---CTVINNNIAHEWTLARIASELLMS 171 + +F + + + ++ IN+N + + + +A +S Sbjct: 152 KGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLS 211 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + +E + + + R+++A++LI SI +A G+++VSYFI VF+ Sbjct: 212 KFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKE 271 Query: 231 YYGMTPTEYQER 242 Y G+TP +Y++ Sbjct: 272 YVGVTPFKYKKN 283 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 11/255 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD-----KCVENFVFVSRD 57 LH + + Y + + GDLVF D + + + V Sbjct: 33 HLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLYINP 92 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQ----EVAQLSQNKNLRYAEMLR 113 L L + E A L ++ S + ++ + + +LR Sbjct: 93 ELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGSSWLLR 152 Query: 114 KRALIFALLSVFLEDEHFI-PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 R + L + + + V +N+N TL +A +SP Sbjct: 153 HRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEAFRISP 212 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 L + ++ ++S L R++ A +L+ SI +A G+ + S+F +F+ Sbjct: 213 HYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGKMFKRT 272 Query: 232 YGMTPTEYQERSAQR 246 ++P Y+++ R Sbjct: 273 VQLSPRAYRQQYRMR 287 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 8/250 (3%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + Y + +N Y GD++F +I + V R T+S Sbjct: 19 SHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPV-NERVTISF 77 Query: 62 FLPMLKEEALNLHAHK----KVSSLLVHHCSRDIPVFQEVAQL-SQNKNLRYAEMLRKRA 116 L +S + V + + ++ + L K+ Sbjct: 78 DGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLMKKG 137 Query: 117 LIFALLSVFLE-DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 + LL E + I ++ + TL +A MSP+ Sbjct: 138 CFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMSPAYF 197 Query: 176 KKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 +K + Y + LT R++ A +L++ S+ +A CG+ +YF FR G+ Sbjct: 198 SRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKAKGV 257 Query: 235 TPTEYQERSA 244 +P +++ Sbjct: 258 SPRAFRKMQG 267 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 96/253 (37%), Gaps = 9/253 (3%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H I Y ++ + + + EN V R L Sbjct: 30 SHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMH-HSFEENDVPFRRLLLYF 88 Query: 62 FLPMLK--EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 +++ + L +V L + + +++ Q + +L E++ Sbjct: 89 NPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITLMVNAL 148 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 AL V DE P Q N T + ++ + + TL ++A+ +S L ++ Sbjct: 149 ALQLVRNSDEAARPE-----QRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREF 203 Query: 180 RE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 + ++ Q + R+ A +L+ +SI ++ G+ +V++F V+++ GM+P++ Sbjct: 204 KRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQ 263 Query: 239 YQERSAQRLSNRD 251 ++ +R D Sbjct: 264 NKQAYLKRGKPAD 276 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 11/250 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIR----VDKCVENFVFVSRDT 58 H I L +NG GDL F A + +D E VF + Sbjct: 36 HWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGGTPIDCVYECIVFDMKSL 95 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L + K+ +H K ++SLL V + + K L Y L + + Sbjct: 96 LKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFESMAQKKLGYE--LVTQGSL 153 Query: 119 FALLSVFLEDEHF----IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + LL + LE + N + N V ++I TL ++ M+P Sbjct: 154 YHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSKAAGMTPKY 213 Query: 175 LKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + R + S L R++ + + +V SI +A++CG++ +SYFI F+ Y G Sbjct: 214 FCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFIKTFKKYKG 273 Query: 234 MTPTEYQERS 243 +TP +Y + Sbjct: 274 VTPKQYLKDY 283 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 90/254 (35%), Gaps = 17/254 (6%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 Q H I+Y V + GDL V + + Sbjct: 33 QHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIF 92 Query: 62 FLPMLKEEALNLHAHKKVSSLLVH------------HCSRDIPVFQEVAQLSQNKNLRYA 109 +L++ + K+ SLL + + + + + K RY Sbjct: 93 RTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYE 152 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 ++ + + +L++ E ++ IN++ A T+ ++A Sbjct: 153 FLMMGQ--LIQVLAMLQRYECDGSMVSTPTNN--MDDAIQYINDHFATNLTVQQVAERSF 208 Query: 170 MSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 MSPS ++ ++ ++ Q L R+QR +L+ SI+ A GY + +F +F Sbjct: 209 MSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLF 268 Query: 229 RNYYGMTPTEYQER 242 R G+TP EY+ Sbjct: 269 RKKTGVTPREYRRS 282 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 9/252 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS---RDTL 59 H + Y H M + F GD+V S I + + R + Sbjct: 34 HQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLM 93 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN--KNLRYAEMLRKRAL 117 F L E + + + V + + E +++ + + + L + + Sbjct: 94 VAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLSA 153 Query: 118 IFALLSVFLEDEHFIPLLLN---VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 +F LL V + ++C + + H L IA E+ M+ S Sbjct: 154 MFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRSA 213 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + + ++SQ +T+ R+ A L+ + + G++ + +F+ VF N G Sbjct: 214 FCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMG 273 Query: 234 MTPTEYQERSAQ 245 M+PT+Y+++ Sbjct: 274 MSPTKYRKQYKN 285 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 96/250 (38%), Gaps = 11/250 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y V+G N G+ +F ++ I +E + Sbjct: 39 HWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHS--GLEMIKRSIGYAIVFD 96 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ------LSQNKNLRYAEMLRKRA 116 L +L E + H+ L+ + E + + K Y L ++ Sbjct: 97 LRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKS 156 Query: 117 LIFALLSVFLED--EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 L+F + + E + V IN N +L ++ ++ MS Sbjct: 157 LLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFY 216 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L + +E S + + + R+ +A++L++ S+ +A CG+ ++SYFI VF+ Y Sbjct: 217 LCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMH 276 Query: 234 MTPTEYQERS 243 TP ++++++ Sbjct: 277 TTPLKFRKQN 286 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 19/254 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H C I Y R Y ++G + G + +N D L Sbjct: 36 HWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPKDN---CRYDCLVFD 92 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA------ 116 + L + + H + +++H R I F ++ +++ ML K Sbjct: 93 MAALLKSSQICTLHLQ---PIINHERRFITFFSADSEPAKDAKAVIDAMLEKEPGYEFTV 149 Query: 117 ---LIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLM 170 L+ L + EH+ R V + I N TL +A+E M Sbjct: 150 PGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNITLEELANECGM 209 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 + + + +E + + L R++ A +LI + +A+ CG++ SYFI VF+ Sbjct: 210 NRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFNDYSYFIKVFK 269 Query: 230 NYYGMTPTEYQERS 243 + G+TP +Y RS Sbjct: 270 SMKGVTPRDYCRRS 283 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 97/255 (38%), Gaps = 19/255 (7%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 Q H A H + V G + G+ F ++ ++ +++ + Sbjct: 34 QHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHE---IKSGGPSLHHAIVF 90 Query: 62 FLPMLKEEALNLHAHKKVSSL------------LVHHCSRDIPVFQEVAQLSQNKNLRYA 109 +L ++ H + + + + +F + L Sbjct: 91 NPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSC 150 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQ---PNMRTRVCTVINNNIAHEWTLARIAS 166 L + I +L +F + + F+ ++ + N +V I+ N A +L +A Sbjct: 151 ASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAK 210 Query: 167 ELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 MSP+ ++E + E R+Q+A Q++ + +VA+S G+ + SYFI Sbjct: 211 ICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFI 270 Query: 226 YVFRNYYGMTPTEYQ 240 FR Y +TPTEY+ Sbjct: 271 RKFREYKNVTPTEYR 285 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 9/249 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--------VFV 54 H + Y +V+ G LV +I N + Sbjct: 26 HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRF 85 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 S L ++ + + + + + + +Q + M++ Sbjct: 86 SIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVKT 145 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 F + + + Q + V T + NN + L +A + +S S Sbjct: 146 LFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSY 205 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L KK ++ + + L R++ A +L++ SI +A +CG++ +YF FR G Sbjct: 206 LSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKG 265 Query: 234 MTPTEYQER 242 ++P +Y+ Sbjct: 266 ISPNKYRHN 274 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 98/249 (39%), Gaps = 13/249 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + ++NG F GD++F +++ + EN V + +F Sbjct: 57 HWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMD----VIMF 112 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY-----AEMLRKRAL 117 P L L + + R PV E+A+L + Y + M R+ Sbjct: 113 EPSLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSD 172 Query: 118 IFALLSVFLED---EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + LS+ + + V + ++ + WTL ++ +SPS Sbjct: 173 LIRFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSR 232 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 ++ TS L + R+ A+ L+ I +A +CG+ ++S F +F+ + G Sbjct: 233 FSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVG 292 Query: 234 MTPTEYQER 242 +P+E +ER Sbjct: 293 ASPSEIRER 301 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 95/251 (37%), Gaps = 9/251 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF---VSRDTL 59 H + Y H M ++F GD+ S + + + R + Sbjct: 34 HRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEYAADSADEDGCVRYLM 93 Query: 60 SLFLPMLKEEALNLHAHKK---VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 F L E ++ + + + + P V + + ++ E+ R A Sbjct: 94 VAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKTLSEMNGMDELGRLSA 153 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + L +F +H ++ N ++C + + H L IA+E+ M+ S Sbjct: 154 MFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSIALDDIAAEVGMNRSA 213 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + + ++SQ +T+ R+ A L+ + + G++ + +F+ VF + G Sbjct: 214 FCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGFNDLPHFVRVFTSTMG 273 Query: 234 MTPTEYQERSA 244 M P++Y+++ Sbjct: 274 MPPSKYRKQFK 284 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 98/264 (37%), Gaps = 15/264 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y ++ +Y GD+ + + V+N + DTL Sbjct: 51 HWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPHHT-DTLHFH 109 Query: 63 LPMLKEEA-----LNLHAHKKVSSLLVHHC--------SRDIPVFQEVAQLSQNKNLRYA 109 L ML + L + S+ C + + ++ ++ + K Y Sbjct: 110 LDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMIRQKERHYE 169 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 +L+ + L F + + + IN + A T+ +++ + Sbjct: 170 LLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTIEKLSELMG 229 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 S + ++ TS ++ + + R+ A + + + +A + G++++S F F Sbjct: 230 YSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNNLSNFNRQF 289 Query: 229 RNYYGMTPTEYQERSAQRLSNRDS 252 ++YY TP++Y++ + + + S Sbjct: 290 KHYYDQTPSQYRKTHSNKKKTKKS 313 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 97/251 (38%), Gaps = 9/251 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF---VSRDTL 59 H + Y H Y M + F GD+ S + + + R + Sbjct: 34 HRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVRYLM 93 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPV---FQEVAQLSQNKNLRYAEMLRKRA 116 F L E + + + + + + + + ++ E+ R Sbjct: 94 VAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDELGRLCE 153 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + L ++F +H ++ + ++C + + H +L IA+E+ M+ S Sbjct: 154 MFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEVGMNRSA 213 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + + ++SQ +T+ R+ A +L+ + + + G++ + +F+ VF+N G Sbjct: 214 FCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTLG 273 Query: 234 MTPTEYQERSA 244 M+P++Y+ R Sbjct: 274 MSPSKYRRRFQ 284 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 89/256 (34%), Gaps = 20/256 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + ++ V+ EY N GD+V I E+ + + Sbjct: 39 HWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDS-CEYENILFN 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVH-------------HCSRDIPVFQEVAQLSQNKNLRYA 109 L ML + + + H S I E + + Y Sbjct: 98 LDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGY- 156 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIAS 166 L+ RA +F + + L + + V I N A ++ IA Sbjct: 157 -RLKIRACLFNFFFELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQ 215 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 S S K + TS+ L + R+ A +++ + VA CG+ ++SYF Sbjct: 216 WCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYFN 275 Query: 226 YVFRNYYGMTPTEYQE 241 F+ YG++P E+++ Sbjct: 276 RKFKEKYGVSPREFRK 291 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 6/245 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF---VFVSRDTL 59 H I Y ++ + Y GD V QI E + T Sbjct: 38 HYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYFTK 97 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKRALI 118 ++ + + ++ LS A +++++L+ Sbjct: 98 EEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQSLL 157 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNM-RTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 F +L + + ++ + IN TL +A+ MSP+ + Sbjct: 158 FQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTYFSR 217 Query: 178 KLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 K R + + + R+Q+A L+ ++ +A++CG+ +YF VF+ G++P Sbjct: 218 KFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTGLSP 277 Query: 237 TEYQE 241 EY+ Sbjct: 278 REYRN 282 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 77/255 (30%), Gaps = 12/255 (4%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--------VF 53 + H I Y + + GDLV + + V Sbjct: 30 EHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERILVN 89 Query: 54 VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113 + +S LP +EE L A V L + + + + Y E + Sbjct: 90 FRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEYCQ 149 Query: 114 KRALIFALLSVFLED---EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 L + + + H V IN + +L+ +A+ + Sbjct: 150 LLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRFHL 209 Query: 171 SPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 SP L R + + R++ A L+ + +A GY S ++F VF+ Sbjct: 210 SPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRVFK 269 Query: 230 NYYGMTPTEYQERSA 244 ++P Y+ Sbjct: 270 KAKAVSPQSYRREQR 284 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 89/255 (34%), Gaps = 6/255 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ N L+ Y VN + GD + + + + +S Sbjct: 13 AVRPNYLLHYCLSGQGEYHVNNQVYQIKAGDAFLIMPNVV-TYYQADQHEPWTYLWISFD 71 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 ++ + + LV HC + + + + L Y+ L + ++ Sbjct: 72 GSKTRQYLKRCNLDEHN---LVVHCDYINELRETTIAILAHNKLSYSNELFIQGQLYTFF 128 Query: 123 SVFLEDEHFIPLLLNVLQ-PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 S + + + I NN T+ IA L ++ S L ++ Sbjct: 129 SFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNRSYLTTLFKK 188 Query: 182 E-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S + L + RM RA L+ +I ++A SCGY + F F N + M P +Y+ Sbjct: 189 HLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNSHQMAPRDYR 248 Query: 241 ERSAQRLSNRDSAAS 255 ++ ++R + Sbjct: 249 KQFKLVDNSRMNDPH 263 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 84/245 (34%), Gaps = 4/245 (1%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 M+ H + + + G+ DL+ + + + + + + ++ Sbjct: 35 MEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPW---EYIA 91 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 L + ++ + A S + R+IP + + + + L Sbjct: 92 LGIEGVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLELI 151 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 LLSV V IN + + TL +++ + ++ L + Sbjct: 152 LLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAFK 211 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 S L + R++ A L+ +S+ ++ G+ S SYF FR G TP Y Sbjct: 212 NYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNAY 271 Query: 240 QERSA 244 +++ Sbjct: 272 RKKKK 276 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 86/253 (33%), Gaps = 13/253 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + Y+ GDL+ ++ S + + Sbjct: 38 HYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMK 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 L + ++ + + L ++ F A+ + + E + A+L Sbjct: 98 TDFLGSDFFSIPEMRNIRQLF--EKAKGGIAFTGSAKKKIGEKIEILEYKSDFQRLLAIL 155 Query: 123 SVFLE----------DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 ++ E + + + + + + N +L +A M+ Sbjct: 156 NILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEEMADLTHMTV 215 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + ++ ++ Q + E RM A L+ + SI + G+++ S+F F+ + Sbjct: 216 PSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNKSFKAF 275 Query: 232 YGMTPTEYQERSA 244 GM+P+EY+ + Sbjct: 276 TGMSPSEYRNQLK 288 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 90/248 (36%), Gaps = 5/248 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV---FVSRDTL 59 H I + ++N + GD V S + N + T+ Sbjct: 30 HYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNSTVKRYNLFFTM 89 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR-ALI 118 + + ++ H +L + L Q + + A I Sbjct: 90 DFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQDSCSQAVIPAYI 149 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 +LS+ + + I L N I+ + +L +A + MSP+ KK Sbjct: 150 SLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPTYYSKK 209 Query: 179 LRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 ++ + + LT+ R+ A +L+ ++ +A+ CG++ +YF FR +G++P Sbjct: 210 FKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEFGLSPL 269 Query: 238 EYQERSAQ 245 +Y++R Sbjct: 270 QYRKRQKN 277 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 12/255 (4%) Query: 2 QSLHGN-------CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFV 54 +SLH ++ + +V+ + + G + + + + + Sbjct: 23 ESLHSFGPASRPTYILHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADAKNPW- 81 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 + ++ L + + + +F + ++ + KNL AE L+ Sbjct: 82 KYFWIGFDGEGAEKYLRELGI---IQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKL 138 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + L + S+ +E+ ++ T I NN + + I + ++ S Sbjct: 139 QGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSY 198 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L ++ + + LT R+ RA +L+ I SI+ VA SCGY F ++ YG Sbjct: 199 LSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYG 258 Query: 234 MTPTEYQERSAQRLS 248 +TPT+++++ + Sbjct: 259 VTPTQHRKKDRKEAK 273 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 91/251 (36%), Gaps = 11/251 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD-----KCVENFVFVSRD 57 H I Y + ++ ++GE GD + Sbjct: 35 HWHDEFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLK 94 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ----NKNLRYAEMLR 113 +S + + ++ L + + +++ ++ + + L ++ Sbjct: 95 YISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNITTQIK 154 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + ++ + E + FI + + + + I N + +L + +S Sbjct: 155 TKIILLQFILEMWE-KGFIVENNTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEK 213 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + +E + SQ + R++ A QL+ S+ A+ GY ++SYFI F+ Y Sbjct: 214 YISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKTY 273 Query: 233 GMTPTEYQERS 243 G++P +Y+++ Sbjct: 274 GVSPLKYRKKQ 284 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 14/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 LH + Y VN + G+L+ + + + R ++ Sbjct: 24 HLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSH-ERICITFS 82 Query: 63 LPMLK---EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK----- 114 L+ +E K S V F+++ + ++ + Y + Sbjct: 83 KSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKA-HREMMYQDTYSLYLASS 141 Query: 115 ---RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 ++F L + + I + + I +N TL A+ MS Sbjct: 142 HVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYCNMS 201 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + KK + + + L R++ A +L++ I +A+ G++ +YF VF+ Sbjct: 202 TTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVFKR 261 Query: 231 YYGMTPTEYQER 242 G++P +Y++ Sbjct: 262 MKGISPCKYRKN 273 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 17/256 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS-----RD 57 H I Y + V F+ GD+V S + + + + + Sbjct: 48 HFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVVLFGPSLPHYMRSDDAYHGDNPRLRVQG 107 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 T+ F + + + + +L+ R + VF + + L+ Sbjct: 108 TIIQFEENFMQYSFDHYPQFHQIRVLLKEARRGV-VFHTADAGAVRDMVSAFPELKGFGQ 166 Query: 118 IFALLSVFLEDEHFIPLLL----------NVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 I LL + +P + ++ + IN+N L IA Sbjct: 167 ITGLLDLLQALAVSVPRRMLASPCYYEKFPTAGNKRIDKIISFINSNYTRSLKLDEIAEM 226 Query: 168 LLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 M+ S + + ++ Q + + R+ A +L+ I I ++AV CG+ S+ +F Sbjct: 227 ANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEISQIAVECGFDSIPHFNR 286 Query: 227 VFRNYYGMTPTEYQER 242 F+ G+TPT+Y+ + Sbjct: 287 TFKQLTGLTPTQYRNQ 302 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 14/253 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y L +N E GDL+ + + K + R ++ Sbjct: 30 HWHDEMELIYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFR-SIVFD 88 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL-----------SQNKNLRYAEM 111 L L A +L + +S L+ + + + S +K + Sbjct: 89 LNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYYF 148 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQP-NMRTRVCTVINNNIAHEWTLARIASELLM 170 ++ +AL F+ L + P + + ++ IN N + T A + + Sbjct: 149 VKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTAAELTALSNY 208 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S K ++ + + + R+++A +++ S+ +A+ G+++ SYFI F+ Sbjct: 209 SEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIKKFQ 268 Query: 230 NYYGMTPTEYQER 242 GM+P +++ Sbjct: 269 QATGMSPHKFRRN 281 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 11/256 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + CL+ Y VNG + G F + + + +++ Sbjct: 37 VRSYCLLHYITKGKCKFQVNGMTYHLQAGQGFFIAPDFETRYETDGDEPWN-----YIWV 91 Query: 64 PMLKEEALNLHAHKKVS-SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 EE +L +S + + C + + V + Q++ + + + + ++ + Sbjct: 92 GAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFRMSTLYRFI 151 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-E 181 ++ E+ L +V + V T + +++ + A IA+ + ++ S L R + Sbjct: 152 AILSEERQVNQPLASV--NSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQ 209 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + CRM RA L+ SI +A SCGY FR YG++P +Y++ Sbjct: 210 TGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPADYRK 269 Query: 242 RSA--QRLSNRDSAAS 255 Q S+R S Sbjct: 270 SFLADQTQSSRKPHES 285 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 105/261 (40%), Gaps = 13/261 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H + Y ++ ++ GD++ + + + ++ + Sbjct: 38 HWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSIHPIAKEKHITDNFQFHL 97 Query: 61 --LFLPMLKEEALNLHAHKKVS-SLLVHHCSRDIPVFQEV-------AQLSQNKNLRYAE 110 L L ++ + +L+ + S + VH +P + ++ L++ ++ + Sbjct: 98 DMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKACLFDIFSLAKEESRHFEI 157 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 +L+ + F L F + ++ INN+ + T+ ++ + Sbjct: 158 LLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGY 217 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S + ++ TS ++ + + R+ +A +L++ I +A G++++S F F+ Sbjct: 218 SKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFK 277 Query: 230 NYYGMTPTEYQERSAQRLSNR 250 YY +TP++Y+++ + +R Sbjct: 278 RYYNLTPSQYRKKYTKPKESR 298 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 96/261 (36%), Gaps = 26/261 (9%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H +A+ + + + GD++ + Q C + S F Sbjct: 33 HSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTD----PSNPATEFF 88 Query: 63 LPMLKEEALNLHAHKKVSSL--LVHHCSRDIPVFQ---EVAQLS---------QNKNLRY 108 + + + + L L + P+ E+ Q +N R Sbjct: 89 VGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRS 148 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLL------NVLQPNMRTRVCTVINNNIAHEWTLA 162 + ++ + +L + L ++ + + + + ++ ++ + + +L Sbjct: 149 GRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLD 208 Query: 163 RIASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIH-GFSIKRVAVSCGYHS 220 +IA + +SP + + + E + + L R+++A +L+ SI+ VA GY Sbjct: 209 QIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDD 268 Query: 221 VSYFIYVFRNYYGMTPTEYQE 241 V +F +F+ +GM P++ + Sbjct: 269 VYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 6/243 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI Y VNG GD + V + + Sbjct: 39 IRDHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNT-EVIYQADAQDPWEYTWVGFTG 97 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 K +H S + +++ + + + L ++ L+ Sbjct: 98 SDAATILRATDFTKA--HPYIHSVSNGNEIKRQLMHIYDARGTEFENALEMTGRLYTTLA 155 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-E 182 +F+ P + + + I+ N ++ T+ IAS + +S S L + + Sbjct: 156 LFVSAATSKPPQNSA--NSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQSIL 213 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 S + LT+ R+++A L+ SI +A S G+ + YF F G++P EY+ + Sbjct: 214 GVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYRSK 273 Query: 243 SAQ 245 + Sbjct: 274 YKK 276 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 98/256 (38%), Gaps = 13/256 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE-NFVFVSRDTLS 60 + H + + + +N D V + ++I +C + N V + + Sbjct: 32 KHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIHSIECPDPNITIVLQIPMK 91 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 F + +E+ A K S +R + + + + + Y L+ ++ Sbjct: 92 SFEGYMSDESRITFADKDES-----QKARLVALVTAMYRTYEKGEFGY--RLKVKSQFME 144 Query: 121 LLSVFLEDEHFIPL----LLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L + + + + + + ++V + N E +L +AS +PS L Sbjct: 145 FLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYMKENYDKELSLEMVASRFGFTPSYLS 204 Query: 177 KKLREEETS-YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 RE + Y L + R++ A++ ++ + +A+ G+ F F+ YG Sbjct: 205 HMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALDHGFADARAFAKAFKKRYGCL 264 Query: 236 PTEYQERSAQRLSNRD 251 P++Y+++ Q+ N+ Sbjct: 265 PSQYRKQMNQKQVNQK 280 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 102/255 (40%), Gaps = 14/255 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF--VSRDTLS 60 H I Y + ++NG+ F GD++ +++ + ++ V +S D+ Sbjct: 39 HWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTW 98 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA---- 116 + L+ + +++ ++ RD P ++ L + R A Sbjct: 99 F-IHNLRFDPELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVY 157 Query: 117 -LIFALLSVFLEDEHFI-----PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 L+ L+ ++ Q +V V+ N AH WTL +AS + + Sbjct: 158 SLLLQFLATVNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYL 217 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 SPS + + L R+++A+ ++ + VA+ CG+ +++ F +F+ Sbjct: 218 SPSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFK 277 Query: 230 NYYGMTPTEYQERSA 244 + GMTP Q++ + Sbjct: 278 KHIGMTPKASQKQHS 292 >UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PB15_CHIPD Length = 291 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 17/260 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRD----- 57 H C + + +V F+ GD+VF V E++ + Sbjct: 31 HFHPECELVFVMESNGKRIVGDSIESFDVGDMVFLGPHIPHVWYNDESYHKNNDQLKARS 90 Query: 58 -TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY--AEMLRK 114 + + E+ L K ++ L H R + + + + + L E L + Sbjct: 91 VVIYFPKDIFGEKFYGLPETKSLTDLF-HRAQRGMKILGPTYDMLKEQILSLPKKEGLER 149 Query: 115 RALIFALLSVFLEDEHFI-------PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 + +L + E + N + V + N + E +L +AS Sbjct: 150 IISLLNILKILAETKDVQYLASTGYSHAFNAKDNHKIDEVFKYVMGNFSKEISLQDVASI 209 Query: 168 LLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 +SP + + + S+ Q L E R+ A + + +SI +A SCG+ ++S F Sbjct: 210 TNLSPQSFCRFFKNRTKKSFVQFLNEVRIGHACKRLTEEDWSIAEIAYSCGFKNLSNFNR 269 Query: 227 VFRNYYGMTPTEYQERSAQR 246 F+ G TP EY+ + Sbjct: 270 FFKEIVGKTPKEYKNELRLK 289 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD---KCVENFVFVSRDTL 59 H I Y + + ++GE GD + + ++ Sbjct: 48 HWHDEFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLK 107 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDI--PVFQEVAQLS----QNKNLRYAEMLR 113 + L L+++ +D + +++ + + ++ Sbjct: 108 YISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETESKITAQIK 167 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + ++ + + + F+ + + + + I N + +L + +S Sbjct: 168 TKIILLQFILEMWK-KGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEK 226 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + +E + SQ +T R++ A QL+ S+ A+ GY +VSYFI F+ Y Sbjct: 227 YISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAY 286 Query: 233 GMTPTEYQER 242 G++P +Y+ Sbjct: 287 GISPLKYRNS 296 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 14/249 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y R+ I ++ E GG + ++ N + T+ Sbjct: 35 HWHDELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGELH--YMGSNDLNADYYTILFP 92 Query: 63 LPMLKEEALN-----LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ-----NKNLRYAEML 112 L + ++ + L + S +++ H ++ E+ L + NK + L Sbjct: 93 LEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIISLLEKLIYINKYEKGFYQL 152 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 + L+ +LS L + + +MR + T +N+N + TL+ +A E MS Sbjct: 153 DCKILLLEILSNILSIPDIL-VKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSE 211 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + ++ ++S+ + R+ A L+ SI VA+S G+ +VSYFI F+ Sbjct: 212 KYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKES 271 Query: 232 YGMTPTEYQ 240 YG TP Y+ Sbjct: 272 YGKTPFSYR 280 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 14/270 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H + + G ++F DA E + + Sbjct: 33 HSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIVSERCRMFNVEFSFEQ 92 Query: 61 -------LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113 F + AL +K+ S LL+H + + K+ + Sbjct: 93 GCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLILEVDKKSEQTD--FM 150 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + L+ L E + Q R I+ N E ++A IA+ + + P Sbjct: 151 VQLLLSEYLIRIAELAE--AKVAEPDQQAYVKRALAYIHQNYDREVSVADIANSVHLHPG 208 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L++ + S + L R+ +A ++ SI + G +S YF F+ + Sbjct: 209 YLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQYFSTTFKKHV 268 Query: 233 GMTPTEYQERSAQRLSNRDSAASIVAQGNF 262 TP+EY++R + R + I+ Sbjct: 269 KCTPSEYRKRHQYNDNLRRKSEDIIQSAEA 298 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 8/247 (3%) Query: 3 SLHGN-CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + I ++ + + GD++F D+ + + ++ + S +S Sbjct: 2 HQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVSD 61 Query: 62 FLPMLKEEALNLHAHKKVSSL-LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 F + A + L L +F QL+ + A++ Sbjct: 62 F-QLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILCK 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 L Q ++ V I+ + TL IA+EL +P L R Sbjct: 121 LDEELARHGQ----PPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFR 176 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 E S Q + R+ A L++ SI +A SCGY++ +YF VF+ GMTP +Y Sbjct: 177 EHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQY 236 Query: 240 QERSAQR 246 + Q Sbjct: 237 RRDWVQN 243 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 97/258 (37%), Gaps = 16/258 (6%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL-FL 63 H + Y + + + G D++ +Q V++ LS F+ Sbjct: 45 HECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKF-IVKSESGCEFIVLSFKFV 103 Query: 64 PMLKEEALNLHAHKKVS-----------SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 + ++ + +L V + I + + + +N ++ + Sbjct: 104 NRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLN 163 Query: 113 RKRAL-IFALLSVFLEDEHFIPLLLNVLQ-PNMRTRVCTVINNNIAHEWTLARIASELLM 170 + +F L+S L+ E + + + INNN + +L IA + + Sbjct: 164 YLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFL 223 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S S + +EE S L + R++RA +L+ I +A+S G+ + F +F+ Sbjct: 224 STSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFK 283 Query: 230 NYYGMTPTEYQERSAQRL 247 Y +TP +Y++ + Sbjct: 284 KYVKLTPLQYRKNVQVKK 301 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 85/249 (34%), Gaps = 12/249 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + + ++ F DLV K T+ Sbjct: 32 HFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLLGPGLPHKWKAPT-LDETQVITIQFH 90 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC-------SRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 M LN + + LL+ V + + LS + A Sbjct: 91 EQMYNSFLLNKRVFEPIRELLIRSTRGIVYTGKTFERVKERLLNLSNARGFNTALEFYSI 150 Query: 116 ALIFALL---SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 ++ + + LL+ + ++C I N + TL IA + MS Sbjct: 151 LYDLSIADEQRLLTSASYDSSLLVRESRSRRIEKICKYIEVNFKKDITLKEIAELVNMSE 210 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S + ++ S+ LT+ R+ A +L+ S+ +A CG+ ++S F +F+ Y Sbjct: 211 SAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQSVADIAFECGFSNLSNFNRIFKKY 270 Query: 232 YGMTPTEYQ 240 TPT+Y+ Sbjct: 271 KNQTPTDYR 279 >UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y024_CROTZ Length = 296 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 15/261 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN---------FVF 53 H + Y Y + MV+ + G L + E Sbjct: 40 HWHQCLELLYVEEGYGVVMVDNQQYTMRPGRLFIFPPMTLHKVMVEERERERYRRTVIHL 99 Query: 54 VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ-NKNLRYAEML 112 + L L P + A + + V + + L +E Sbjct: 100 DNHAALRLLAPFAQRYARLEALSLRGARATVVDFADIHAHLDHLFTLYAPRLAKGRSEHE 159 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 + + LLS+ E P + T+V + N A +++L +A +L S Sbjct: 160 EVASFLIHLLSLLPE----TPAPPPRASNALSTQVMFWVEENYAQKFSLGALALKLNRSR 215 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S L ++ ++ + LT R+++A +L+ H +S+ +A G+ +YFI FR Sbjct: 216 SYLSRRFQQETGEAIHDYLTTFRLRKACELLRHHAYSVADIARMTGFSDTTYFISSFRKR 275 Query: 232 YGMTPTEYQERSAQRLSNRDS 252 G TP +Y++ + Sbjct: 276 LGETPLQYRKSRKHEGPHGGP 296 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 84/249 (33%), Gaps = 11/249 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + ++ + D++F + + + ++ F Sbjct: 36 HWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHSGIPHDCVYQCIVFDMNTF 95 Query: 63 L---PMLKEEA-LNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L P+ E LH + + + + K+ Y L Sbjct: 96 LKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVLFDAMYEKDTGYE--LTVFGQF 153 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNM----RTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + + + +FI + +V I N A+ TL +++ + MSP Sbjct: 154 YHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKNYANPITLQELSASVSMSPKY 213 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + E + L R++ A + SI +A G++ +SYFI F+ Y G Sbjct: 214 FCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKG 273 Query: 234 MTPTEYQER 242 MTP +Y+ R Sbjct: 274 MTPGKYKRR 282 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 7/255 (2%) Query: 3 SLHGNC-LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H NC + + +V E + GD++ D+ + + + + + + Sbjct: 35 HQHENCIELNFMISGNGTHIVGNEICHTQPGDIIIYDSKVMHDESLMLDSLTDACCIAVT 94 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 L L + ++++ + + S K Y A + Sbjct: 95 GLKRPGARPNALLPPGLHPCIPCQSIAQELCTLYHIIERSLAKPHGYPA---ANAAAQTI 151 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 + + + + + + RV + I + A ++ IA E S + + Sbjct: 152 VHLVWQQISERAVRAAGQENMLMERVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKH 211 Query: 182 E-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + Q L R+ +A L++ S+ VA G+ +YF VFR GM P ++ Sbjct: 212 TTNYAPLQYLRRWRIGKAQTLLIDTDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFR 271 Query: 241 E--RSAQRLSNRDSA 253 R+AQR R + Sbjct: 272 RTWRAAQRKQQRAHS 286 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 16/260 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y ++ +G + GD +F ++ + +E T Sbjct: 44 HWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFD 103 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQ---------EVAQLSQNKNLRYAE--M 111 L +L K V+ +L +P+++ E Q R E Sbjct: 104 KSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEEFFE 163 Query: 112 LRKRALIFALLSVFL----EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 LR R L L + E P L ++ + ++ + + + + +++ IA+ Sbjct: 164 LRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAAS 223 Query: 168 LLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 + +S + + + + L R+Q A L++ SI +A+ G+ S SYF Sbjct: 224 IPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGK 283 Query: 227 VFRNYYGMTPTEYQERSAQR 246 +FR+++ +TP +Y+ S Q+ Sbjct: 284 IFRSHHRLTPAQYRNLSRQK 303 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 16/253 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + Y + V+ + + LV Q+ + + + Sbjct: 39 HWHDDMELIYIKKGCGHISVDFKEYHVTAPSLVLILPGQLHSIDQYMDESM-EYENIIFS 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN------------KNLRYAE 110 L ML + ++ LL + VF V ++ K + Sbjct: 98 LSMLLPGKYDYTKEDFLTPLLAGRFT-VPTVFTPVYPYYEDVVAPIDACDEICKTMPQGY 156 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQP-NMRTRVCTVINNNIAHEWTLARIASELL 169 L ++ ++ V + L + + V + NN A + ++A IA Sbjct: 157 QLYIKSKLYEFFFVLDNRCRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADVAG 216 Query: 170 MSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 S S + +E TS+ L + R+ A +L+ S+ ++ G+ S+SYF F Sbjct: 217 FSESHFMRYFKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRAF 276 Query: 229 RNYYGMTPTEYQE 241 + +YGMTP +Y++ Sbjct: 277 KKHYGMTPLQYRK 289 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 84/253 (33%), Gaps = 10/253 (3%) Query: 3 SLHGN-------CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS 55 LH I + + V GE GG A ++ + E + Sbjct: 31 PLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIFYQADEVDPWT- 89 Query: 56 RDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 + + E S +L +++ + + ++ R + Sbjct: 90 YSWIGFNGEQVAEILSRTRLTP-ASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQTLL 148 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 LL + + R ++++ + E ++ ++A+ + + L Sbjct: 149 YEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKYL 208 Query: 176 KKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + Q L + RM++A L+ +SI VA S GY F +F+ G Sbjct: 209 SSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVGT 268 Query: 235 TPTEYQERSAQRL 247 +P++Y+E+ + Sbjct: 269 SPSDYREQWQKSD 281 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 5/245 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + Y + M+ GE + D V + ++ F R L Sbjct: 30 SHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPF-KRIVLYF 88 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 ++ + + +K L+ IP LS + + L Sbjct: 89 SPDLIANDTICQLLSEK---ELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQL 145 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 + L + + + I+N+ + ++ ++A L +SP L + + Sbjct: 146 NGLLLNMLRLDFEAVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEFKN 205 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + Q L R+ A +L++ ++I +++ G+ ++++F F+ G+ P E + Sbjct: 206 ATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPREKK 265 Query: 241 ERSAQ 245 + + Sbjct: 266 KLYQK 270 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 91/258 (35%), Gaps = 18/258 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE------------N 50 H + Y + N G+++ + + + + N Sbjct: 72 HKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQDCVFNIMFRQN 131 Query: 51 FVFVSRDTLSLFLPMLKEEALNLHAHKKV--SSLLVHHCSRDIPVFQEVAQLSQNKNLRY 108 F S D L + + + L + + K Y Sbjct: 132 FFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASADTIERLIVECFEKQSCY 191 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + ++L+ L + + + ++ T I + A TL +++ + Sbjct: 192 ETI--TQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQESPAE-ITLQKVSEQF 248 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 S + L + +++ ++S+++ +CR+ +A + SI +A+ GY+ VS+F V Sbjct: 249 QYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYNDVSHFYKV 308 Query: 228 FRNYYGMTPTEYQERSAQ 245 F+ G TPTEY++ + Sbjct: 309 FKQEIGCTPTEYRKHYSH 326 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 18/258 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y R + ++G+ G + A + + + V T Sbjct: 35 HWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAPDT--PVDYFTFIFP 92 Query: 63 LPMLKEEALNLHAHKKVSSLLVHH------------CSRDIPVFQEVAQLSQNKNLRYAE 110 L + + + + L H + IP+ E+ + N + Sbjct: 93 LEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELVEE--NGKMGTHR 150 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 ++ R + ++ + +E L N + + I +N LA ++ + Sbjct: 151 QIQVRIRLLQMMDLLVEYSQLEELTRNASGE-LEKEILLYIQDNYHDNIGLAELSEHFHL 209 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S + + E + +Q + R++ A L+ S+ +A+ GY +VSYFI F Sbjct: 210 SEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNVSYFIRRFS 269 Query: 230 NYYGMTPTEYQERSAQRL 247 + G +P Y+ A+R Sbjct: 270 SAMGESPLRYRNGKARRD 287 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 18/259 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H Y L V+ +Y G+ VF D I + + +L Sbjct: 39 HWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDIHAAHAHGDQG-CAFFSLVFD 97 Query: 63 LPMLKEEALNLHAHKKVSSL----------LVHHCSRDIPVFQEVAQLSQNKNLRYA-EM 111 +L + V L + + D+ + + + L ++ + Sbjct: 98 TQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSLLEHIVALMRSCSTESPGYE 157 Query: 112 LRKRALIFALLSVFLE-----DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 + +F +L+ + + + V I +N +H LA +A+ Sbjct: 158 GAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKTVIQHIQHNYSHPIRLAELAA 217 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 + MS + + + + R+++A +L+ I +A+ G+ ++SYFI Sbjct: 218 LIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREPERKISDIALEVGFDNISYFI 277 Query: 226 YVFRNYYGMTPTEYQERSA 244 VFR +P+E+++R Sbjct: 278 RVFRKAMNCSPSEFRKRLQ 296 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 94/253 (37%), Gaps = 14/253 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS---RDTL 59 LH I ++ + GD+V + I + + Sbjct: 33 HLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLDKGKTVTTSALYFCP 92 Query: 60 SLFLPMLKEEALNLH-------AHKKVSSLLVHHCSRDIP-VFQEVAQLSQNKNLRYAEM 111 SL M+ E+ +LH K+ + + +F E+A+ + +L E Sbjct: 93 SLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEIAKETAIADLYSGET 152 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + LI + + L+ L P I+ ++ E L +A+ + Sbjct: 153 VA--LLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDAHLHEELDLKMLAAHACVH 210 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 PS KK + +Y + L R+ +A L+ SI+ +A +CGYHS+ +F FR Sbjct: 211 PSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACGYHSMPHFYRTFRA 270 Query: 231 YYGMTPTEYQERS 243 G TP Y++ S Sbjct: 271 ATGTTPAAYRKNS 283 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 92/253 (36%), Gaps = 16/253 (6%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD--KCVENFVFVSRDTL 59 + H I Y + + GE G L F Q V K + + Sbjct: 35 EHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVYNC 94 Query: 60 SLFLPMLKE---------EALNLHAHKKVSSLLVHHCS-RDIPVFQEVAQLSQNKNLRYA 109 L L E E L+ A + +S V + +F+E+ Q K Y Sbjct: 95 LLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPAYM 154 Query: 110 EMLRKRALIFALLSVFLEDE-HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 +L +L+ +L+ + I + Q I+ N A E L +A++ Sbjct: 155 AVLA--SLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYASELKLGELAAQA 212 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +S + R S + + RM A +L+ S++ +A + GY + +F + Sbjct: 213 KLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFFYRL 272 Query: 228 FRNYYGMTPTEYQ 240 F+ G+TP +Y+ Sbjct: 273 FKKKTGVTPRQYR 285 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 16/254 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSR-----D 57 H I Y + + ++GE + D + + + Sbjct: 35 HWHDELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLE 94 Query: 58 TLSLFLPMLKEEAL-------NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNK--NLRY 108 +S L E+++ L +++ C R I + ++++ + K Sbjct: 95 YISFQTDDLMEKSILSPLKRGRLMISPQINDTAADICERLIEINEQISGKNAEKTDAANI 154 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + + + + + N + T I N E +L ++ Sbjct: 155 EAQFETKITLIKFIRKMWRNGLILENGTNGTNTTE-KEMITYIRQNYTREISLKEFGAQF 213 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +S + + +E + SQ + R++ A QL+ S+ VA+ GY +VSYFI Sbjct: 214 HLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASVTEVAMCSGYQNVSYFIRS 273 Query: 228 FRNYYGMTPTEYQE 241 F+ YG++P +Y+ Sbjct: 274 FKKMYGVSPLKYRN 287 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + +V + GDLV ++ + + + Sbjct: 43 HFHPELELVLVKKSQGYRIVGDNITNLSAGDLVLVGSNLPHLWHQDNTAGELEAVVVQFV 102 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM--LRKRALIFA 120 L E + V L+ R + + +V ++ + LR+ A + + Sbjct: 103 ADFLGREFAGRSDFEPVRQLMDK-ARRGLHITGDVRDRVADRMSAMVGLGPLRRLAELLS 161 Query: 121 LLSVFLEDEHFIPLLLNVL-------QPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 +L L RV I+ ++ ++A+ +SP Sbjct: 162 ILDDLAHSPGVAFLSSPGFAPQLGLGDQARVDRVMQFIHKHLCEPINRDQVAAIAALSPG 221 Query: 174 LLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + R ++ L E R+ RA +L+ + VA CG+ ++++F +F + Sbjct: 222 AFSRFFRSRTGRTFPAYLNELRLGRAARLLSTTDLRVVDVAADCGFRNLAHFNRLFLKWK 281 Query: 233 GMTPTEYQER 242 G+TP+E+++R Sbjct: 282 GVTPSEFRKR 291 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 20/272 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + + L G GD+ + ++ + L + Sbjct: 34 HRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVVNVLFVP 93 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIP------------------VFQEVAQLSQNK 104 + +E A+ + + R + +++ + NK Sbjct: 94 ALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLMKEYGNK 153 Query: 105 NLRYAEMLRKRAL-IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLAR 163 Y +++ + + +F +LS + L M R+C I + AH +L + Sbjct: 154 ESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQAHPLSLEQ 213 Query: 164 IASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 I+ MS S R+ S+ + + R+Q A QL+ I R+A+ GY +S Sbjct: 214 ISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGYEDLS 273 Query: 223 YFIYVFRNYYGMTPTEYQERSAQRLSNRDSAA 254 +F +VF+ G TP+ Y++R R + + Sbjct: 274 HFNHVFKKLTGETPSLYRKRMKGRSESGEPRE 305 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 21/264 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV--DKCVENFVFVSRDTLS 60 H I Y L V + GD+ + E+ + + Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 61 LFLP-----------MLKEEALNLHAHKKVS--SLLVHHCSRDIPVFQEVAQLSQNKNLR 107 F+ L K+++ S + D+ V + + R Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 108 YAE-MLRKRALIFALLSVFLEDEHFIPLL----LNVLQPNMRTRVCTVINNNIAHEWTLA 162 + +A + LLS+ + L + + TRV I+N+ + L Sbjct: 167 TPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLN 226 Query: 163 RIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 + S +S S +E ++++ LT+ R+ +A+ ++ S+ V S G++ + Sbjct: 227 DLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNEL 286 Query: 222 SYFIYVFRNYYGMTPTEYQERSAQ 245 SYF +F+ Y G++PT++++++ + Sbjct: 287 SYFCRIFKKYTGISPTDFRKQAMK 310 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 12/254 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV----DKCVENFVFVSRDT 58 H I ++ GD++F ++ I D E VF Sbjct: 36 HWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHSGIPVDCTYECLVFDISSL 95 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L + E +H KK+ L + ++ ++ ++K Y LR + Sbjct: 96 LQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFEIMKDKKNGYQ--LRIYGNL 153 Query: 119 FALLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + L + E +I +N + +V I +L +A + M+ Sbjct: 154 YYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKVLFFIETKYMENISLEDMAKTIKMNEKY 213 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY-Y 232 K +E + + + L R++ A + I SI VA CG++ SYF VF+ Y Sbjct: 214 FCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGFNDTSYFTKVFKKYNS 273 Query: 233 GMTPTEYQERSAQR 246 GMTP EY + ++ Sbjct: 274 GMTPREYSKLYLKK 287 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 11/255 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + GDL+ + + + + R L Sbjct: 36 HYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNH-ERIVLHYD 94 Query: 63 LPMLK-----EEALNLHAHKKVSSLLVHHCSRDI---PVFQEVAQLSQNKNLRYAEMLRK 114 LP E L L ++ + + +F+ + + Q Y +R Sbjct: 95 LPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQLHVRN 154 Query: 115 RALIFALLS-VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 A L + +P + T + IN + L +A + +S Sbjct: 155 MATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFFISKG 214 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L + +E +SQ + R++ A L+ +SI +++ CG+ + S+F VF+ Sbjct: 215 HLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVFKELS 274 Query: 233 GMTPTEYQERSAQRL 247 G++P +Y++ + Sbjct: 275 GLSPRDYRKLEQNQK 289 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 96/261 (36%), Gaps = 21/261 (8%) Query: 1 MQSLHGNCLIAYARHKYILTMV-NGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL 59 + HG + Y H + + N E N GD++ + + + ++ L Sbjct: 70 LMHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVL 129 Query: 60 S----------------LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN 103 LF ++ + + R + + + Sbjct: 130 KPKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYS 189 Query: 104 KNLRYAEMLRKRAL-IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162 K + Y + +F L+ +++ + + ++ T + T ++ N + TL Sbjct: 190 KEMCYRRAAEAELIVLFTCLARIYKEQLGLKG-FDEVKNKQVTDIITYMDENFSQA-TLQ 247 Query: 163 RIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSV 221 +A S L + +++ ++S+++ +++ A + ++ +A G++ Sbjct: 248 SVADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDA 307 Query: 222 SYFIYVFRNYYGMTPTEYQER 242 SYF VF+ YG +P EY+++ Sbjct: 308 SYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 105/267 (39%), Gaps = 18/267 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y+ V+G+ GDLV +++++ E+ V + L Sbjct: 39 HFHDAIELLYSFSGRARVFVSGQPFLMEKGDLVIINSNEVHAI-WGESGEKVEYLVIKLD 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV-------------FQEVAQLSQNKNLRYA 109 +L + ++ K V + S + ++ +K+ Y Sbjct: 98 PEVLYSTSRSIFESKYVFPFTMSKSSPQTLLKSGEMASTVIPATIAKINDEFSHKDYGYD 157 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN---MRTRVCTVINNNIAHEWTLARIAS 166 +R L + + I + + + + +V ++ ++ A T + A+ Sbjct: 158 FAIRIHICTIFLAVLRHWRQSGISVGTESINDSDFQLMRQVFQLLESHYATALTAKQAAA 217 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 +S S +K++ S+++LL R+ A +L+ SI VAVS GY S SYFI Sbjct: 218 TCNLSYSYFSRKIKSITGRSFTELLNYIRITEAEKLLTTTDLSITEVAVSVGYSSTSYFI 277 Query: 226 YVFRNYYGMTPTEYQERSAQRLSNRDS 252 F+ ++P +++R Q + +++ Sbjct: 278 QHFKQAKHLSPLRFKKRLQQSVFDKNE 304 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 13/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + +VNG R +V + + + + Sbjct: 42 HWHKEIEILCVHQGQLELVVNGFSRKIKANTIVLIPPNTLHTAYRIAQQS-CRFSCIVFS 100 Query: 63 LPMLKEEALNLHAHKKVSSLLVH-------HCSRDIPVFQEVAQLSQNKNLRYAE--MLR 113 ++ + +++ L+ + QL + + LR Sbjct: 101 EQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELR 160 Query: 114 KRALIFALLSVFLEDEHFIPLLLNV--LQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + ++ LLS LE P + LQ V + I++N L +A + +S Sbjct: 161 LKGIVIQLLSHLLEVGTDQPAKKSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLS 220 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + ++ TS L R+ R+ +L+ ++ +A + G+ + ++F F+ Sbjct: 221 KEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKK 280 Query: 231 YYGMTPTEYQER 242 +G TPT+Y++ Sbjct: 281 MFGETPTQYRKN 292 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 88/253 (34%), Gaps = 12/253 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDK-CVENFVFVSRDTLSL 61 H + + V F GDLV + K ++ S + Sbjct: 31 HYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPNLPHCWKNTPDSVGPASSIVVQW 90 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQE-----VAQLSQNKNLRYAEMLRKRA 116 + LN+ K + LL ++ + QE + L+ +++ L K Sbjct: 91 PAEFMGSGWLNVEEFKSIRRLL-QLATQGVRFNQEVSARVLPMLAAMLDMQPFPRLMKFL 149 Query: 117 LIFALL----SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 I LL S+ L E LN V I + A TLA +A + MS Sbjct: 150 EILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYIREHYAERITLATLAGLVHMSE 209 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + L E R+ A ++++ + ++ +CGY S +F FR + Sbjct: 210 ESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQVAEISFACGYESPPFFFRQFRKF 269 Query: 232 YGMTPTEYQERSA 244 G+TP Y+ + Sbjct: 270 GGITPAAYRNQFR 282 >UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A3_CLOCE Length = 307 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 94/276 (34%), Gaps = 16/276 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC----------VENFV 52 H C I Y + E +F D + +E Sbjct: 29 HTHNRCEIMYVVSGNCVVSAKKEMITLKKNQFIFLDQNVSHCLYIKSGTPCTILNLEFLC 88 Query: 53 FVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 ++ + L + E +K L+++ + +++ + K +L Sbjct: 89 SPNKGGIDLNEMLNNSETYRGFIDRKEDFLVLNDNGKVGYALKDLISELEKKKSSDQFLL 148 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 R L F +L F + L L + IN ++ + + IA ++ Sbjct: 149 RI--LFFRMLVEFTRNIGQDSHYLGSLH---LRKAQKYINEHLYEDLNVEMIAEYTGINH 203 Query: 173 SLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S L+ ++ + + RM+ A L+ SI +A GY+S +F Y+F + Sbjct: 204 SYLQTLFSKQFNCGIIAYVNKLRMEHAAFLLNNSNMSITDMAFHLGYNSRQHFGYIFEKH 263 Query: 232 YGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDR 267 Y M+P +Y++ Q + A N + ++ Sbjct: 264 YNMSPQQYRKLKGQNIKADTGGGQWYADENGHFKNQ 299 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 91/243 (37%), Gaps = 6/243 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ LI Y + V+ + + G + R + S L Sbjct: 36 AVRPYYLIHYILSGSGIFKVDNVTYHLHAGQGFLIVPNC-RTTYIADKETPWSYVWLGF- 93 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 K A + V + ++ + V ++ NL LR + F L Sbjct: 94 --TGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNLRALSCFFRFL 151 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 S N + + T+ I+++++ T+ +A + ++ S L + + Sbjct: 152 SYIATGTVINIQQANSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNLNRSYLTSLFKHD 210 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + S+ + R+ +A L+ SI +VA CGY + F VF+ YG++P +Y++ Sbjct: 211 LDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPRQYRQ 270 Query: 242 RSA 244 + Sbjct: 271 ETK 273 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 93/247 (37%), Gaps = 10/247 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV-------FVSR 56 +H + + + + I V E GDL+ + V NF F + Sbjct: 30 VHDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAEFIVMGFYLK 89 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVH-HCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 + LKE L + + +SS H + VF + + Q +L Sbjct: 90 PESKSKIEALKEIYGFLESLENISSPFYFIHIRKRSNVFFCLESILQEAKENKKGLLLYI 149 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 I L + + + + + + I+ N + + IA +L MS S + Sbjct: 150 KSI-ELFIYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAKKLFMSESSI 208 Query: 176 KKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + + + + L R+++A + + + I +A+ CG+ S+ F +F+ Y G Sbjct: 209 SRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFNDIFKKYTGC 268 Query: 235 TPTEYQE 241 +PT Y++ Sbjct: 269 SPTHYRK 275 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 89/243 (36%), Gaps = 5/243 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ L+ + E G ++ ++ S + + Sbjct: 13 AVRNCYLLHLCLEGEGVFYSGEERYPIKQGQGFLIHPGKL-TFYQADSVNPWSYLWVGIG 71 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 ++ + + C++ + + ++ L A + + ++ L Sbjct: 72 GHDAEKYLRLAGLSARN---PIFSCTQIDTAKSYILDMMKHHALSAANEIYIQGILMQFL 128 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 ++ +ED + + I+ N + T+ IA L ++ S L + + Sbjct: 129 ALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLNRSYLTELFLKT 188 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + S Q LT R+ ++ +L+ SI+ +A SCGY S F FR G++P+EY++ Sbjct: 189 VQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRKVNGLSPSEYRK 248 Query: 242 RSA 244 + Sbjct: 249 QKR 251 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 11/251 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV----DKCVENFVFVSRDT 58 H C I + ++ E D++F + D E VF + Sbjct: 36 HWHTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGLPNDCIYECIVFDMKLL 95 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L K+ ++ +K ++ L + + + + K+ Y + + Sbjct: 96 LKDNNACTKQIYDIVNHNKVIAHKLPSNVQALNNCCTSLFEAMRVKSTGYE--FIAQGAL 153 Query: 119 FALLSVFLEDEHFIPLLLNVLQPN----MRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + L+ LE++ ++ + V T+I N + TL ++ MSP Sbjct: 154 YYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLEDLSKASGMSPKY 213 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + E + + L R++ + + ++ SI +A++CG++ VSYFI F+ + G Sbjct: 214 FCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDVSYFIKTFKKHKG 273 Query: 234 MTPTEYQERSA 244 +TP +Y + Sbjct: 274 VTPKQYLKSLK 284 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 90/249 (36%), Gaps = 8/249 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + + ++ GDL+ + + E +F R + Sbjct: 33 HEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLF-ERVLIGFS 91 Query: 63 LPMLKEEALNL-----HAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK-RA 116 +++ + H ++ + + H + + Q + Y+ ++R Sbjct: 92 RTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYSSLVRSLMN 151 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + L + + I +N + TL ++A + +SPS L Sbjct: 152 ELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAKQFYISPSYLS 211 Query: 177 KKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + R + + + R++ A +++V S++ ++ G+ +++F F+ G T Sbjct: 212 RVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKTFKKIAGTT 271 Query: 236 PTEYQERSA 244 P +Y++R Sbjct: 272 PLQYRKRHG 280 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 34/268 (12%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y +V ++ GDL+ + + + S + Sbjct: 64 HFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPDGGEESDNE---E 120 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 LK +N+ K + S+ IP+ L ++ + + I LL Sbjct: 121 KSELKVRGVNIQFEKDFMHYSISQYSQFIPIR----NLLEDACRGIKFTITRSGKIIKLL 176 Query: 123 SVFLEDEHFIPLLL--------------------------NVLQPNMRTRVCTVINNNIA 156 + ++L ++++ +V +N + Sbjct: 177 KQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEKVIAYLNKHYT 236 Query: 157 HEWTLARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVS 215 L IAS M+P+ + +E ++ + + + R+ A +L+ +I +++ + Sbjct: 237 ESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSSMMNISQISAT 296 Query: 216 CGYHSVSYFIYVFRNYYGMTPTEYQERS 243 CG+ S +F +F+ GMTPT Y+E+ Sbjct: 297 CGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 85/248 (34%), Gaps = 7/248 (2%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRD-TL 59 + H I + + GD+V + + E + Sbjct: 27 VSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTETPEHERLIVNI 86 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 LH + L+V +D + + Q + AL Sbjct: 87 HEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEKKPGFELYALTL 146 Query: 120 ALLSVFLEDEHFIPLLLNVLQP-----NMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 AL + + H + L+ + V +N++ +E +L +A + +SP Sbjct: 147 ALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHLLAEKFYVSPYY 206 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L + +E ++ + L R++ A +L+ + +A G+ SV++F VF++ G Sbjct: 207 LSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVTHFGRVFKSVTG 266 Query: 234 MTPTEYQE 241 P Y++ Sbjct: 267 YVPLHYRK 274 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 11/251 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + + YF+ GDLV ++ E+ + Sbjct: 57 HYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNESTHNEYEMVIQFK 116 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-----LSQNKNLRYAEMLRKRAL 117 L E ++ +++S+LL I +EV + +++ + L + Sbjct: 117 PDFLGEPIWDIPEMQRISALL-EKSKAGIVFGEEVKKRIGKEITEMHETSSLDKLCRFLK 175 Query: 118 IFALLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 I LSV + L V + + ++ TL +A M Sbjct: 176 ILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLEEVADLANMKVP 235 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + ++ +++Q + E R+ AL+L+ SI V G+++ SYF F+ Y Sbjct: 236 SFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNFSYFNRTFKEYI 295 Query: 233 GMTPTEYQERS 243 +P++Y++ Sbjct: 296 QKSPSQYRKEF 306 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 16/261 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + I ++ E GDL+ + + VS D+L Sbjct: 11 HWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVS-DSLVFH 69 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV------FQEVAQ-----LSQNKNLRYAEM 111 L L + + K ++ + V ++E+ + L +Y Sbjct: 70 LDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGYE 129 Query: 112 LRKRALIFALLSVFLED---EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 L + L+ L + + V + I +N T+ ++S Sbjct: 130 LYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVC 189 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 S + + + + + R+ RA +V + +A+ G+ ++SYF V Sbjct: 190 HFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFNKV 249 Query: 228 FRNYYGMTPTEYQERSAQRLS 248 F+ +G+TP Y++ S + LS Sbjct: 250 FKERFGVTPGSYRKNSRENLS 270 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 5/242 (2%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 N ++ Y + V G + + + + + S + Sbjct: 38 RPNYILHYVMKGKGIYQVGETKYPLKEGQAFLIEPESLTFYQADKTDPW-SYLWVGFGGT 96 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 + +L + + L C + + V ++ + + + ++ SV Sbjct: 97 EAQRFVRDLGLNSRQ---LTCECEYGEELKEIVFEMLHHTCSTAENLYYLQGKLYQFFSV 153 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-E 183 + + I N + + T+ IA+ L ++ S L Sbjct: 154 LARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYLALNRSYLYTIFMNSLG 213 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 S + LTE R+ R + + + S++ +AVSCGY + F VF+ GMTPT+Y+ + Sbjct: 214 ISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVFKQKMGMTPTQYRNDN 273 Query: 244 AQ 245 + Sbjct: 274 RK 275 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 96/261 (36%), Gaps = 22/261 (8%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H Y + ++ + GD + I EN +S L Sbjct: 37 SHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSK-ISYVALVF 95 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHH-------------CSRDIPVFQEVAQLSQNKNLRY 108 L +++ L+ V+ ++ + ++ + F + + NK+ + Sbjct: 96 NLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYGF 155 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRT-----RVCTVINNNIAHEWTLAR 163 L + +F++ S ++ + L + ++ V I N + ++ Sbjct: 156 Q--LEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKE 213 Query: 164 IASELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 +A S + + + + +Q + R+Q+A L+ SI +A G+ VS Sbjct: 214 LADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVS 273 Query: 223 YFIYVFRNYYGMTPTEYQERS 243 YFI F+ + ++PT+Y++ + Sbjct: 274 YFIKTFKKFLSISPTKYRKSN 294 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 104/247 (42%), Gaps = 9/247 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ N ++ + ++G GD+ ++ + L+ Sbjct: 47 TVRDNYVLHFIVDGKGKFTIDGITTQLKTGDMFILPKGKVAFYQADG-----EHPWTYLW 101 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAE--MLRKRALIFA 120 + +A N+ + ++ H + + V ++ +L+Q ++ + + L+ A ++ Sbjct: 102 VGFSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDDVTELQLTAELYK 161 Query: 121 LLSVFLEDEHFIPLLLNVL-QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 LL+ +++ + + + N +V +I+ + ++ IA +L ++ S L K Sbjct: 162 LLAFLMKEFPSKAMSDSSILIQNYIKQVKKIIHTQYGNPLKISEIAKKLNLNRSYLYKIF 221 Query: 180 RE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +E + S L + RM+++ L+ F I +A + G+ F F+ ++G +P+ Sbjct: 222 KEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSKAFKKHFGQSPSH 281 Query: 239 YQERSAQ 245 Y++ + Sbjct: 282 YRKALKK 288 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159 + + +A L A L + + + I+ + A Sbjct: 366 IRYERLASFASCRSAAELKRAALDELDRIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPL 425 Query: 160 TLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218 TL +A + +SP K +E ++ +T R++RA + + S+K + S GY Sbjct: 426 TLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQSLKEICFSVGY 485 Query: 219 HSVSYFIYVFRNYYGMTPTEYQERSAQR 246 + +YF VF+ G++P+EY+++ R Sbjct: 486 NDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 94/257 (36%), Gaps = 9/257 (3%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 L+ Y + +G+ + D S+I + ++ + + Sbjct: 45 RNEYLLHYVIKGKGILKADGKTYHIGENDAFLIYPSEITYYEADKDDPWT-YIWIGFD-G 102 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 M E L + K + + C + + + L Y+ L++ ++ LS Sbjct: 103 MKAESCLINASFSKENRVSKFECGETLV--HYLNGMLSASKLTYSNDLKREGYLYMFLSA 160 Query: 125 FLEDEHFIPLLLNVLQPN----MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 ++++ + I++N + + IA + ++ S L + Sbjct: 161 LIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGINRSYLTTIFK 220 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + + S + L + R+ +A L+ + +A + GY++ F VF+NYY M+P Y Sbjct: 221 KSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKNYYKMSPKTY 280 Query: 240 QERSAQRLSNRDSAASI 256 + + + + + I Sbjct: 281 RTQHQELVYSNKKHQKI 297 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 92/250 (36%), Gaps = 7/250 (2%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLK 67 L+ VNGEY + + G+ + + S + + Sbjct: 60 YLLHVVYSGVGTLFVNGEYYHLSKGNAFLLYP-HVEAWYEADLTEPWSYFWIGVRGVDAD 118 Query: 68 EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE 127 + K+ +VH + + ++ Q ++ E L + A + + L Sbjct: 119 SFFTEVGFSKEKPVGIVHQMD---NLLLYINKILQKQDYTIEEQLSRSAYMHLFFANLLR 175 Query: 128 DEHFIPLLLNVLQP--NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EET 184 + L+ + RV ++ + + +++ +A E+ + + L ++ Sbjct: 176 GKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMGIHRAHLFNSFKKDTGY 235 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S + L RMQ A ++ G SI +A GYH F +FR G++P +Y+ Sbjct: 236 SPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIGVSPLQYRNMKE 295 Query: 245 QRLSNRDSAA 254 + L NR++ Sbjct: 296 EMLYNRETGE 305 >UniRef50_A4ARE0 Putative AraC-family transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ARE0_9FLAO Length = 280 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 89/249 (35%), Gaps = 7/249 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H ++ +V F+ GD ++ + + E+ V +L Sbjct: 31 HQHEELQLSLVVRGSGKMIVGDSVHQFSAGDFFVIGSNCPHLFQSEESTESVKMISLFFT 90 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 + NL + S + ++ + + L + + LL Sbjct: 91 SSSFGNDFFNLPDLSDLRSFFDQSTNGFSLTSNQLEVSELMNEIPKQDKLTRFIKLLGLL 150 Query: 123 SVFLEDEH------FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + + E P + V + NN +E +L ++ + M+P+ Sbjct: 151 KIVNKSERRVLTNFINPKKIGTRDGQRLQIVYDFVINNFQNEISLNTVSELVFMTPNAFC 210 Query: 177 KKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + + + Q L E R++ A QL+ G SI +A G++S+S F F++ G++ Sbjct: 211 RFFKVRTNKTLFQFLIELRLEHACQLLQHSGLSIAEIAEQSGFNSISNFNRQFKSQKGIS 270 Query: 236 PTEYQERSA 244 P+ + + + Sbjct: 271 PSLFIKNNQ 279 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 89/253 (35%), Gaps = 15/253 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H Y + + G+ +F + + V + F S + Sbjct: 36 HWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPF-SLYATVVH 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV------FQEVAQLSQNKNLRYAE-----M 111 + +L + + + I + ++ + Q ++ + Sbjct: 95 PDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQKEEGYE 154 Query: 112 LRKRALIFALLSVFLED--EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 L +A + +++ ++ Q +V I+ + + T+ ++A+ + Sbjct: 155 LVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANLVQ 214 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 MS + + + + + R+ +A +L+ +I +++S G+ SYFI +F Sbjct: 215 MSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIKLF 274 Query: 229 RNYYGMTPTEYQE 241 + + TP+E++ Sbjct: 275 KRHKRCTPSEFRR 287 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 88/248 (35%), Gaps = 5/248 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ + LI Y +VNG+ + I +N + Sbjct: 39 AIRDHFLIHYIIEGSGTFLVNGKLYKLHKNQGFIIFPDDI-TYYEADNHTPWIYKWVGF- 96 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 + E L K + + + + + + + + L+YA L+ + L+ L Sbjct: 97 KGIKAEYYLQCAGLTKENPIFEYSNDKFLE--ECFDNMIKASKLKYASELKLQGLLSIFL 154 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 S +E + + I N + + ++ IA+ L ++ +E Sbjct: 155 SELIELSSIDSSSDYYYKDVYIKKCLNYIEMNYSRKLLISEIAALLGLNTKYFSLIFKES 214 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + Q + R+ +A +L+ SI ++ S GY F +F+ GM+P +Y+E Sbjct: 215 IGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIFKKQKGMSPKKYRE 274 Query: 242 RSAQRLSN 249 + S Sbjct: 275 QFINSNSK 282 >UniRef50_Q5G2X8 Putative Arac-type regulatory protein (Fragment) n=1 Tax=Citrobacter sp. MY-5 RepID=Q5G2X8_9ENTR Length = 170 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 167/170 (98%), Positives = 167/170 (98%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 MQSLHGNCLIAYAR YILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS Sbjct: 1 MQSLHGNCLIAYARRGYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVPVSRDTLS 60 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA Sbjct: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 94/266 (35%), Gaps = 21/266 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + V E GD+ ++ + + Sbjct: 82 HWHSEAEFIVVTRGSVCLQVGSERHVLADGDVALLSGGELHSMAAPGKGPSECK-AIVFG 140 Query: 63 LPMLKEEALNLHAHKKVSSL------------LVHHCSRDIPVFQ-EVAQLSQNKNLRYA 109 L +L+ + + +S L H + + E+ + + + + Y Sbjct: 141 LDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPVRQYLAARLCEIVEALEEQPVGYE 200 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLL----LNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 L + ++ +L+ E + ++ + + V T I+ +++ + LA +A Sbjct: 201 --LAVKGCLYDVLAQLFRAELLVEHSPRREMDDRRADTLKAVLTYIDAHLSDKLRLADLA 258 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 MS + +E Q + E R+ RA L+ SI + + G+H VSYF Sbjct: 259 RVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYF 318 Query: 225 IYVFRNYYGMTPTEYQERSAQRLSNR 250 I VFR+Y TP Y++ ++ R Sbjct: 319 IKVFRSYKHCTPLAYRKALLKKPPRR 344 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 100/269 (37%), Gaps = 14/269 (5%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN-FVFVSRDTL 59 ++ H I Y + + GD+ D + + + + +R L Sbjct: 30 VKHFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNRVIL 89 Query: 60 SLFLPMLKEEALNLHAHK----KVSSLLVHHCSRD-----IPVFQEVAQLSQNKNLRYAE 110 + + + ++ ++H + D + +++++ KN Y Sbjct: 90 YIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSGYQS 149 Query: 111 --MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + ++ LLS D I ++N + + + + N E L I+ EL Sbjct: 150 RVEIATIYWLYKLLS-LKHDSTQIHAVINSPKELSASNISAYLEANYTKELALDTISDEL 208 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MS + + +E + ++ + R+++A Q++ SI VA G+ S SYF + Sbjct: 209 FMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFESASYFERI 268 Query: 228 FRNYYGMTPTEYQERSAQRLSNRDSAASI 256 F+ +TP +Y++ + ++ Sbjct: 269 FKKIMTVTPLKYRKTHQSVTIEHEELNTL 297 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 88/250 (35%), Gaps = 8/250 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE--NFVFVSRDTLS 60 H + H + G + + +++ ++ + +F +++ Sbjct: 34 HWHNAVEVIIPLHNGFTVVSGGVEYHLSEKEIIVIPPGELHSMPAQDGRRIIFQCDNSVI 93 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHC-----SRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 +P L+ + ++ L + ++ E + ++R L Sbjct: 94 SEVPSLESILPVFSSAVHITPSLNKELYVLARKNILDIYTEYYSKAPMADVRIYMYLITI 153 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 + DE+ N + V IN N +E L ++AS S Sbjct: 154 LTAIREFQLNSADENSASAAENSDESRKFGLVTKYINQNYMYELPLEKLASIAGYSKYHF 213 Query: 176 KKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + ++ SY Q + R++ A +L+ I VA+ CG+ S++ F FR G Sbjct: 214 SRIFKKYNNMSYIQYINSKRIKAAERLMADSSLPITEVAMQCGFSSLTTFNRAFRKAKGC 273 Query: 235 TPTEYQERSA 244 TPTE+++ Sbjct: 274 TPTEFRKLFK 283 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 8/239 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 LH IAY I +N G++ + I S+ L +F Sbjct: 29 HLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSICFPNDIHTFNSDG----FSKIILFIF 84 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 P L + K + + + D + + + ++ + L++ +L Sbjct: 85 SPDLTRSFFGIRMDKTLENPFMSKNIVDDGI-SSLLYMLHDEYKSVNNKYVIKGLLYTIL 143 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 D HF + + + I + + +L IA +L S L + + Sbjct: 144 GKL--DSHFTFKKSSTFYNSTMQNLLKYIEIHYHEKISLDSIAKDLGFSKFYLSRIFSNK 201 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ + R+ +A +L+ + +A+ CG+ S F +F+ +TPT+++ Sbjct: 202 IGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFESQRNFNRIFKELTALTPTKFR 260 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 89/253 (35%), Gaps = 12/253 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN------FVFVSR 56 H I Y + + G LV + + + + S+ Sbjct: 32 HFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFSK 91 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 D L ++ + V L + ++ ++++ + L +A Sbjct: 92 DYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQVAL--QA 149 Query: 117 LIFALL---SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 L+ LL S ++E L +++ IN N TL+ +A +S Sbjct: 150 LLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQY 209 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L + ++ ++ + + R++ A +L+ + ++ + G+ S+S+F VF+ Sbjct: 210 YLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEVT 269 Query: 233 GMTPTEYQERSAQ 245 +P Y+ + + Sbjct: 270 RFSPLNYRRLNTE 282 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 23/258 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS------- 55 +H + L+ V + + GD + + + + + S Sbjct: 39 HIHPEYELILIEEGKGLSFVGDSIQELSPGDFMLIGKNLPHLWLSADEYYQNSGLVSRSV 98 Query: 56 ---RDTLSLFLPMLKE-EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 D + E N+++ K S V I +E+ ++L E Sbjct: 99 YTQFDDRIFPASLHDIPELENIYSLLKKSQKGVFFTGGSIEALKELF-----RSLVTKEG 153 Query: 112 LRKRALIFALLSVFLEDEHFIPLLL------NVLQPNMRTRVCTVINNNIAHEWTLARIA 165 K ++ LL + + L + + + +V IN N + L IA Sbjct: 154 FEKIEGLYTLLYRLSSECNHATLTTENYINSDSTEDPIINKVHLFINKNYQNNIALEDIA 213 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 + M+PS L + ++ + LTE R+ A +L++ +I +VA CGY+S+S+F Sbjct: 214 CNVGMNPSALCRYYKKHTGKRMFEYLTELRISYATKLLINKNINISQVAYDCGYNSLSHF 273 Query: 225 IYVFRNYYGMTPTEYQER 242 + F+ G TP+EY ++ Sbjct: 274 NHQFKQVTGYTPSEYAQK 291 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 80/253 (31%), Gaps = 2/253 (0%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + +I + + + G+ G + + K ++ + S + Sbjct: 72 VRESYVIHIVKKGKGVFTIGGKSYELEAGQAFIIRPGEETIYKADDDDPW-SYMWVGFHG 130 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 ++ ++ K + + + + SQ + + ++FA + Sbjct: 131 YRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQSALMMLFATIM 190 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE- 182 + I ++ + IA + +S S L ++E Sbjct: 191 EDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGSFKKEM 250 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 S + L R+++A L+ I +A CGY F F+ +GM+P ++ Sbjct: 251 GVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPKSFRNL 310 Query: 243 SAQRLSNRDSAAS 255 + + + Sbjct: 311 EVELETGKAKGDH 323 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 95/247 (38%), Gaps = 7/247 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H I Y M+ + G+L+ + EN + R L Sbjct: 42 SHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSY-GENDMPFKRIVLYF 100 Query: 62 FLPML--KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 + KE L + + + + +E+ + +N + Y R +F Sbjct: 101 ESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTLLNMF 160 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 L ++ + P + + T++ + I+++ + TL ++A + +S L ++ Sbjct: 161 -LFTMLMHTRRREPEQME--ETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLCREF 217 Query: 180 RE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 + ++ Q + R+ A + ++ +I ++ G+ ++++F VF++ G TP+ Sbjct: 218 KRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTTPSG 277 Query: 239 YQERSAQ 245 Y++ Sbjct: 278 YRKHHQN 284 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 19/259 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCV----ENFVFVS-RD 57 H + + + GD+ + C +N S + Sbjct: 29 HCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEESACE 88 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCS----RDIPVFQEVAQLSQNKNLRYAEMLR 113 L + + + ++ ++++L D + +++ + Q + + + Sbjct: 89 ILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKG--QGIG 146 Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQP-------NMRTRVCTVINNNIAHEWTLARIAS 166 + + ALL + + ++ VC + + L IA Sbjct: 147 RIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIAR 206 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 E M+PS L + R+ + L R++ A +L++ SI +A G+ ++S+F Sbjct: 207 EACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHFN 266 Query: 226 YVFRNYYGMTPTEYQERSA 244 F++ G TP EY++ Sbjct: 267 RQFKSLTGQTPGEYRKNIR 285 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 93/254 (36%), Gaps = 7/254 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + Y + + N G+ + + ++ V R L Sbjct: 22 SHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMH-HSYGDSGVSFKRLVLYF 80 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 M+ + + + + + + + + + E AL F L Sbjct: 81 TKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEE-----ALYFIL 135 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 + + + + T + ++ N + TL +A + +SP L ++ ++ Sbjct: 136 NQILILLLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKK 195 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ Q + R+ A +L + S+ ++ G+ +V++F V+R+ G++P++ + Sbjct: 196 YTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSR 255 Query: 241 ERSAQRLSNRDSAA 254 +++ +R + + Sbjct: 256 KQAKERSAAMERHG 269 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 100/256 (39%), Gaps = 14/256 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 +H I Y V G N G +V +QI + + SR ++ Sbjct: 66 HIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIHKTASLGDSPS-SRIVVNFS 124 Query: 63 LPMLKE--------EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 L++ + + ++ L + + + Q+ + E Sbjct: 125 REYLEKVAAAFPEVDFFSFLTDERNHLLSAITVKQQNHIQSILQQMLDLEGETSPEDQAL 184 Query: 115 RALIFALLSVFLE----DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 RA++ A L + L+ + + ++ ++ I + A + TL IAS+ + Sbjct: 185 RAMLLATLLLELKALCVQQQCQGGEKGRVSNHIVEQIQAYIAQHYAEKLTLTGIASQFYI 244 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 SP L + ++ S + + R++ A LI G SI VA G+ + ++F VF+ Sbjct: 245 SPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISSVAGQTGFMTTAHFRRVFK 304 Query: 230 NYYGMTPTEYQERSAQ 245 + G++P +Y+++ + Sbjct: 305 DATGLSPQQYRQQYKR 320 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 95/268 (35%), Gaps = 17/268 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I G+L+ D+ QI + + + + L+ Sbjct: 41 HFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSIVGDPETEYERVILY 100 Query: 63 LPM-LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-----LSQNKNLRYAEMLRKRA 116 + + E+ + K+ + H ++ A L + L AE + + A Sbjct: 101 VDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQIMEELDKAEPMSQTA 160 Query: 117 LIFALLSVFLEDEHFIPLLL----------NVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 ++ L+ F+ + + + + ++ I+++ +L +A Sbjct: 161 ILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYISDHFQERLSLDSLAE 220 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 + +S L + E ++ + R+++A L+ S+ +A G+ S++Y Sbjct: 221 QFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSEIASRTGFESITYLG 280 Query: 226 YVFRNYYGMTPTEYQERSAQRLSNRDSA 253 VF+ Y +TP +Y++ ++ Sbjct: 281 RVFKKYQHVTPAQYRKSLTSTAEKNNTN 308 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 15/260 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF-----VFVSRD 57 H + Y + V F GDLV + +++ V + Sbjct: 31 HYHPEYELTYIVKSHGRRFVGDHVDSFQAGDLVLLGPDLPHFWRNDDDYYQAGSVQKAVS 90 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM--LRKR 115 + F E L + L+ + Q ++Q + + L + Sbjct: 91 IVVQFPATFPERGLATVPEAESVRKLLERSRYGLRFSQAMSQSVSELLEQLPQQTGLPQL 150 Query: 116 ALIFALLSVFLEDEHFIPLLLN-------VLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + +L+ D+ L + + RV + + E + IAS Sbjct: 151 LGLLTILNELATDQEAYLLASDGYQLAPGAAETERMKRVLEFVLLHFREEIRIESIASIA 210 Query: 169 LMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 M+P+ + + ++ + L E R+ A +L+ SI +V++ CGY++ S+F Sbjct: 211 GMAPAAFCRYFKNRTRKTFVEYLNELRIGHARKLLTTTDLSISQVSLDCGYNNSSHFHRQ 270 Query: 228 FRNYYGMTPTEYQERSAQRL 247 F+ Y +TP +YQ + + Sbjct: 271 FKLYTSITPFQYQALAKGKG 290 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 85/250 (34%), Gaps = 14/250 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I + + + GD+ + + + + Sbjct: 121 HWHKSMEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLHAIYAAAGYNM-EYENIIFE 179 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKN--LRYAEML---RKRAL 117 + L A ++ + + L + VF V + + LR AE L R+R Sbjct: 180 VEFLGGGAADVCDKEYLVPLASGQLLQ-PAVFSPVDAGYKQISACLRRAEELCSARERGY 238 Query: 118 IFALLSVFLEDEHFIPLL------LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + + LE ++ + + RV I + A T+ +A+ S Sbjct: 239 ELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCS 298 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 S + + TS L E R+ A + + I +A + G+ ++S F F+ Sbjct: 299 SSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKK 358 Query: 231 YYGMTPTEYQ 240 YG+TP Y+ Sbjct: 359 RYGVTPRAYR 368 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 95/271 (35%), Gaps = 18/271 (6%) Query: 4 LHGN--CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF----VSRD 57 LH ++Y + ++ F GG++V ++ ++ Sbjct: 24 LHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIPPEIPHCWYFEDDDTDEQGRIANI 83 Query: 58 TLSLFLPMLK-------EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAE 110 T++ L E ++ KK + + + + ++ AE Sbjct: 84 TVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDKEKSEAIIDLLEEMCNQSE---AE 140 Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 + + +++ + + ++ T + N + TL +A + M Sbjct: 141 RVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTYVICNAKRDITLDDVARYVGM 200 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 + + ++ ++ L E R+ A QL+ ++ + + G+++V YF F+ Sbjct: 201 NRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTVSEICYNVGFNNVPYFNRTFK 260 Query: 230 NYYGMTPTEYQERSAQRLSNRDSAASIVAQG 260 + G++P EY ++ + +N + + Sbjct: 261 RHKGVSPCEY-KQGGKADANEKKNTGKIGKS 290 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 102/255 (40%), Gaps = 12/255 (4%) Query: 2 QSLHGNCLIAYARHKYIL-TMVNGEYRYFNGGDLVFADASQIRVDKCVENFV------FV 54 + H + I+Y I ++G + GD+V +++ I V+ F+ Sbjct: 31 RHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVVQGKNRKAVTFFI 90 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 S + L P + + A + + + + + + + N ++ Sbjct: 91 SYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFSNLRDDSLAHIKV 150 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQP----NMRTRVCTVINNNIAHEWTLARIASELLM 170 L + L+ + L++ ++ + T + I N + + ++ I+++ + Sbjct: 151 IGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQDLSIDIISAKFNL 210 Query: 171 SPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 SP L + ++ + + R++++ + ++ SI +A+ G+ + F VF+ Sbjct: 211 SPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHGFPNEKSFNKVFK 270 Query: 230 NYYGMTPTEYQERSA 244 +Y +TP +Y+++ Sbjct: 271 TFYNITPNQYRKKIK 285 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 95/254 (37%), Gaps = 15/254 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + Y +L + G+ GD++F ++ ++ + + L Sbjct: 34 HWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVFN 93 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR------- 115 +L + ++ + + + I + L + LR A ++ Sbjct: 94 PSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELA 153 Query: 116 -----ALIFALLSV--FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 L+F LS + + + N + T + +++A T+ + AS + Sbjct: 154 VRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASFV 213 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 MSP + ++ ++ Q + R+ RA L+ S+ +A G S++ F + Sbjct: 214 HMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSKL 273 Query: 228 FRNYYGMTPTEYQE 241 FR G++P + ++ Sbjct: 274 FRQLRGVSPRDLRK 287 >UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDY4_9CLOT Length = 345 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 93/259 (35%), Gaps = 16/259 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H ++Y ++ G+ LV + V + Sbjct: 83 HNHDFFEMSYVYKGTFHNIIGGQQIDQPEDSLVLLSPQAKHRCFTRSSEDLVFNILIKRE 142 Query: 61 ----LFLPMLKE-------EALNLHAHKKVSSLLVHHCSRDI-PVFQEVAQLSQNKNLRY 108 +F+ ML E +L+ ++ L C + + + + + Y Sbjct: 143 LIEKIFVQMLSESESVCRFFLDSLYNVRQKQPYLFFSCDNALTELIHSIIEEYFQQQDFY 202 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 +++ + + L ++ + ++ I + + TL+ IA Sbjct: 203 QSIIQAKLIELFSKLSRLHQKNAEETPAETSNFQLILQIEDYIERHYS-TVTLSSIAEHF 261 Query: 169 LMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +PS L + + ++ +S L+ + R++ A + + I +V GY+ VS+F V Sbjct: 262 NYTPSYLSRLIQKQFNQKFSCLVQDIRLKHACRYLAHSSLPIDQVVEIVGYNDVSHFYRV 321 Query: 228 FRNYYGMTPTEYQERSAQR 246 F+ + ++P +Y++ A R Sbjct: 322 FKQKHNVSPNQYRKSHALR 340 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 8/245 (3%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS- 60 + H I H + + NG+ GG + F + + +N + S Sbjct: 30 EHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSP 89 Query: 61 ---LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 FL L + + S V+H V Q VAQ+ Q + R + Sbjct: 90 DRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQ-QVRQLVAQMEQQEGENDLPSTASREI 148 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 +F L + L L N + + + ++ A E +A + +S L + Sbjct: 149 LFMQLLLLLRKSSLQENLENSA--SRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHR 206 Query: 178 KLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 +L++ + + L R+ +A L+ S+ +A CG+ ++F +FR + +P Sbjct: 207 QLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSP 266 Query: 237 TEYQE 241 + ++ Sbjct: 267 RDIRQ 271 >UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4P0_BREBN Length = 515 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 15/253 (5%) Query: 1 MQSLH------GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFV 54 +++ H ++ Y V+G+ + + G L+ + + + Sbjct: 9 LKNFHLRQVEINTHVLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTT--KIEELRCQSGP 66 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 + +++ + K+V +L V + + V +E++QL++ ++ Y+ LR Sbjct: 67 LHIYRLHYAEARRDQHESAPERKEVEALAVSTPASFLTVLEELSQLTRKRD--YSSFLRS 124 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 +AL++ LL V +++ + + L + S ++PS Sbjct: 125 QALLYELLGVVYDEQK----KKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSS 180 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + + + + LT RM+ A +L+ G S+K VA + GY YF +F+ G Sbjct: 181 YCRAFKRVTGMTPGEYLTGLRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREG 240 Query: 234 MTPTEYQERSAQR 246 ++P Y ++S QR Sbjct: 241 LSPQIYMKQSDQR 253 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 84/253 (33%), Gaps = 11/253 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL- 61 H I + + + + E+ L+ D+ ++ + Sbjct: 32 HWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLCIHVDKK 91 Query: 62 -------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 L + + + S+ +H C + + + Sbjct: 92 QLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRT--NVENKNTSAMRSDGTA 149 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 ++ L+ F ++ ++ + +N + + +L +A+++ S Sbjct: 150 LLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQVGFSREY 209 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + ++ ++ + L E R+ A ++++ SI V G+ + + F +F+ YG Sbjct: 210 FCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRLFKEIYG 269 Query: 234 MTPTEYQERSAQR 246 MTP + + A+ Sbjct: 270 MTPRQARNSYAEN 282 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 14/253 (5%) Query: 2 QSLHG-------NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFV 54 + LH LI + V G + + G + + Sbjct: 28 EPLHKAGPAVKTFYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTP-ATYISDEHHPW 86 Query: 55 SRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 + ++ + + C + + V + + +A+ R Sbjct: 87 RYVWFGFSGRCAHDTLSSIGLTQNQ---PIFTCEDGDKLKKYVFDMLAHNTSGHADHYRL 143 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 +++ LSV + L + I N+ + + ++ + ++ S Sbjct: 144 MGMLYLALSVIANAQK--DKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSY 201 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 ++ S + L R+ +A ++ I S++ +A SCGY S F +FR G Sbjct: 202 FSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTG 261 Query: 234 MTPTEYQERSAQR 246 ++P Y+ QR Sbjct: 262 LSPNAYRLGKRQR 274 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 20/262 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCV--ENFVFVSRDTLS 60 H I Y GE GD++ + + + + E+ +F + S Sbjct: 86 HNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHIFNIMLSKS 145 Query: 61 LFLPMLKEEALN-----------LHAHKKVSSLLVHHCSR----DIPVFQEVAQLSQNKN 105 LF + + + K + CS+ + + +A+ K Sbjct: 146 LFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLIAEYLGKKP 205 Query: 106 LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 Y + ++FA LS ++HFI ++ + + + + I N TL I Sbjct: 206 AYYQVIQSYLIILFAYLSRIYSEQHFIEQ-QDLEKIGILPDIISFIAQNY-QSVTLTEIQ 263 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 + S + ++ ++S+++ + ++ A +L+V +I +A G++ Y Sbjct: 264 NVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIGFNDSHYL 323 Query: 225 IYVFRNYYGMTPTEYQERSAQR 246 VF+ +G+TPT+Y+ + Sbjct: 324 NKVFKKRFGITPTQYRRGMKKE 345 >UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria RepID=Q4ZTP2_PSEU2 Length = 307 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 90/262 (34%), Gaps = 13/262 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD--KCVENFVFVSRDTLS 60 H + V FN L + + + V RD L Sbjct: 44 HFHKEYELHLIVASSGKVFVGDYIGNFNPASLFLTGPNLPHNWISQIDDGEVVPKRDMLV 103 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP------VFQEVAQLSQNKNLRYAEMLRK 114 F L E + A K + L+ I + Q + Q+ + + R L Sbjct: 104 NFTDELLESGNQVFAELKTLTPLLERARYGIEFRCKRTIRQAMKQMQKIADSRGITRLGH 163 Query: 115 RALIFALLS----VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 ++ LL+ L + + + R I + E L +A L M Sbjct: 164 FFILLELLAASDDYQLLSGTAVAHTADEHSVDRTNRAVDYIFAHYGRELPLEEVAEYLGM 223 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 P+ + ++ + + + R+ ++ +L+ + V G++++S F F+ Sbjct: 224 KPTYFSRVFKQATGRCFVEFVNRLRISKSCELLADGDKPVTDVCFESGFNNISNFNRRFQ 283 Query: 230 NYYGMTPTEYQERSAQRLSNRD 251 GMTP+ Y+ + QRL+ ++ Sbjct: 284 QLKGMTPSHYRRLAVQRLTEQN 305 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 84/248 (33%), Gaps = 4/248 (1%) Query: 2 QSLHGN-CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 H + I + + G+ +GGD++ + + ++ + ++ Sbjct: 30 SHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGVLHEEQSSIDNPLITYYCGF 89 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 E + + + + + S K Y + R LI + Sbjct: 90 SLPKASPSEDWVIPPDVEPVIRSSRVFPEIEALMKMIVDESSIKEDGYEGI--SRYLINS 147 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 ++ + + + ++ I+ N +L + + ++P + + Sbjct: 148 VILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQNISLKDLGRQFHVNPYYISHVFK 207 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + S R+ A +L+V + VA GY + +YF +FR G++P + Sbjct: 208 DHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGYDNPNYFSIIFRRVTGLSPNRF 267 Query: 240 QERSAQRL 247 +E + Q L Sbjct: 268 RESNQQNL 275 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 11/247 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + G+ D+V + + + N + L + Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSL-NASPLEYIVLGVA 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 L + + + + + + L + + +L Sbjct: 96 SMEF------LFSKADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVL 149 Query: 123 SVFLEDEHFIPLLLNVL---QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 ++L I L L + + ++ N + +L +A ++ L Sbjct: 150 LIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTF 209 Query: 180 -REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 RE S L R++ + ++ G+S+ +++ G+ S SYF FR GMTP E Sbjct: 210 QREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNE 269 Query: 239 YQERSAQ 245 Y+ ++ Q Sbjct: 270 YRRQTRQ 276 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 86/244 (35%), Gaps = 6/244 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + E + GDLV ++ V+ Sbjct: 37 HTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGIDK 96 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 + L E + S +F ++ +N + +E++ + L +L Sbjct: 97 ISFLAEN----GQTGIQAFCNFRDQSSVSDIFAQMLYEMRNDDYG-SEIICQNLLEILIL 151 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 + + + ++ ++ N TL + S M+ + + Sbjct: 152 RIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAHSFAKY 211 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 S Q L R++ A L+ S+ +A S G+ S SYF FR YYGMTP +Y++ Sbjct: 212 AGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTPLQYRQ 271 Query: 242 RSAQ 245 ++A+ Sbjct: 272 QNAE 275 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 92/265 (34%), Gaps = 29/265 (10%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y +N E + + +++ ++ Sbjct: 43 HWHEELEIIYFEQGCFHLEINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAF---VFS 99 Query: 63 LPMLKEEALNLHAHKKVSSL----------LVHHCSRDIPVFQEVAQL------------ 100 L ML+ A + K V L + + + +E Q+ Sbjct: 100 LSMLRAFAADPVQEKLVQPLAEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASN 159 Query: 101 --SQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP-NMRTRVCTVINNNIAH 157 SQ + + +R +A + + + F E + + + + + + ++ Sbjct: 160 LRSQYRVSSLPQYMRAKASLLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMTE 219 Query: 158 EWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSC 216 + T+ +A++ M+ + ++ L E R++ A +L+ S+ +A+ Sbjct: 220 KVTMQELAAQANMNEQYFCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALES 279 Query: 217 GYHSVSYFIYVFRNYYGMTPTEYQE 241 G++++ F+ FR G TP +Y++ Sbjct: 280 GFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 91/262 (34%), Gaps = 22/262 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H + Y + +V+G GD + + + + + Sbjct: 104 HKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVETDGKDPLAINFLMKKE 163 Query: 61 --------------LFLPMLKEEALNLHAHKKVSSLLVHHCSRDI--PVFQEVAQLSQNK 104 LF + + + H I ++ + +N Sbjct: 164 LFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEPIISQYLLQIFREYEND 223 Query: 105 NLRYAEMLRK-RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLAR 163 L ++ + +F + + E L ++ N +++ + ++ N TL Sbjct: 224 QLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGN-ISKIISYLSENY-RTATLQT 281 Query: 164 IASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 A + P L L++ S+S+++ + R+ A +L+ I VA GY + + Sbjct: 282 TAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELPISDVAQESGYTNRT 341 Query: 223 YFIYVFRNYYGMTPTEYQERSA 244 YF VF+ +GM+P +Y+ ++ Sbjct: 342 YFYKVFQQKFGMSPNDYRHQNQ 363 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 21/267 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFAD---------ASQ----IRVDKCVE 49 H +I Y GE +F GD+ F + + Sbjct: 116 HTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVVFHICLRQT 175 Query: 50 NFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA 109 +F V D + + ++ L+ H + ++ + + Sbjct: 176 SFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIRELSVAQYYLFKMLEEYYDQKM 235 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR------VCTVINNNIAHEWTLAR 163 A +F L + LE + N R + V + + TL + Sbjct: 236 HSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEH-QQTVTLQQ 294 Query: 164 IASELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 AS P+ L + + R ++ + L R++RA +++ I++++ GY S Sbjct: 295 AASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISHMVGYSDRS 354 Query: 223 YFIYVFRNYYGMTPTEYQERSAQRLSN 249 F F+ Y MTP +Y++ + + Sbjct: 355 SFDRSFKRQYHMTPRKYRDNGRESQNK 381 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 94/256 (36%), Gaps = 17/256 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + +N + GD++ ++ + EN +++ Sbjct: 36 HWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESST-WNSIVFN 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC------SRDIPVFQEVAQLSQN-----KNLRYAEM 111 + L L+ + ++ ++ + +D + E+ + N + Y Sbjct: 95 MDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFE 154 Query: 112 LRKRALIFALLSVFLE----DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 L ++LIF S+ + + LN + V I N E + R+++ Sbjct: 155 LEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAI 214 Query: 168 LLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 + S + ++ + Q + R+++A LI SI +++ G+ ++SYFI Sbjct: 215 CHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIR 274 Query: 227 VFRNYYGMTPTEYQER 242 F+ Y TP ++ R Sbjct: 275 SFKEKYNTTPKGFKTR 290 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 87/250 (34%), Gaps = 13/250 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H C + +VN + G L F Q+ + R TL Sbjct: 35 HWHQGCELLIVFDGAGSVVVNQQMSPIKKGMLFFFQPFQLHHV-APASAAPYERATLHFD 93 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRD-----------IPVFQEVAQLSQNKNLRYAEM 111 ++ A + L + ++D I ++ Sbjct: 94 PLHAEKRLTAYPAMAQFFRQLKNGYNQDPFIDFSEDYFYIRSLCDMHDKMAEAASINERA 153 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 R+ L+ LLS P + + R+ I +++ + L+ +A +L +S Sbjct: 154 EREELLLIQLLSYMQHQLKGRPPTKKLRHIHYAERIMGWIEDHLTEPFNLSLLAQDLYLS 213 Query: 172 PSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 S + K R E +S + LT RM+ A L+ I ++ G +VSYFI +F+ Sbjct: 214 KSYVSKVFRRETGSSITDYLTARRMKEACHLLQTTSLPIDEISQRIGLTNVSYFIQMFKR 273 Query: 231 YYGMTPTEYQ 240 TP +Y+ Sbjct: 274 KTNATPHQYR 283 >UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=Enterobacteriaceae RepID=A4WEG5_ENT38 Length = 279 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 89/247 (36%), Gaps = 10/247 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN-FVFVSRDTLSL 61 H I Y + + +V+ + G L F + E R + L Sbjct: 34 HWHQCLEILYVEEGFGVAIVDNRHYTMRPGRLFFFPPFTLHKVMVDEQAEAIYRRTIIHL 93 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSR----DIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 + + + ++ L D+ + +L Sbjct: 94 DHHAVLKVLRDFPQTQQRLQKLSRRGGEAWVADMADCHPHIHHLFSGYHPPLTSESVASL 153 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 I +L ++ +D+ P + + ++V ++ + +++L +A EL S S + + Sbjct: 154 IISLFAMLPDDKDGAPGSSHG----IASQVMFWLDEHYQQKFSLDALAGELGKSRSYVSR 209 Query: 178 KLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 K E L R+++A + ++ S++ +A G+ V+YFI F+ G TP Sbjct: 210 KFHAETGEKIHDYLNTLRLRKACECLLHSNESVRDIATRVGFSDVTYFISAFKKGIGETP 269 Query: 237 TEYQERS 243 +Y++ Sbjct: 270 LQYRKNH 276 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 87/244 (35%), Gaps = 5/244 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + Y ++ + G+ + + EN F R + Sbjct: 23 SHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPF-KRLLVYF 81 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + L K + + V + + L + ++ A + + Sbjct: 82 SKEEVDSVQLLKVLEKGTGVYKPDQREKQV-VHRMLDDLLKEQDDPQAYHEDYIHTLLNM 140 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 L I + + N T V + I+ N + ++ ++A +SP L ++ + Sbjct: 141 --ALLTIARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCREFKR 198 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ Q + R+ A ++ + +I ++ G+ ++++F VF++ GMTP+ ++ Sbjct: 199 YTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPSNFR 258 Query: 241 ERSA 244 + Sbjct: 259 KMYK 262 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 5/242 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 + + LI Y N + GD+ + + Sbjct: 41 VRDHYLIHYIVSGKGYYETNHKTFPLTSGDVFLIYPDTQVTYYADALDPW-EYYWVGFSG 99 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 + S ++ CS V ++ Q+ + + +A + ++ LS Sbjct: 100 SDAGLILEATDFSNE--SPVISSCSYGEKVKDQLYQIYEARGNEFANAVAMAGQLYITLS 157 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE- 182 +FL + + + T + ++ ++ T+ +A+ + +S S L ++ + Sbjct: 158 LFLSGAS-NHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGISRSHLFREFKAHL 216 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 S + L+E R++ + L+ SI +A S GY + Y+ VF++ GM P++Y+ Sbjct: 217 GKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQSVKGMPPSKYRNL 276 Query: 243 SA 244 + Sbjct: 277 HS 278 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 88/252 (34%), Gaps = 12/252 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF------VSR 56 +H + Y +N G ++ + + E F S Sbjct: 30 HVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINFSH 89 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 D + L L ++ + + + + E+ + + K + +++R A Sbjct: 90 DFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVR--A 147 Query: 117 LIFALLSVFLEDEHF---IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 L+F LL + + + IN + TL +A + +SPS Sbjct: 148 LLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPS 207 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 L + ++ + + R++ A + + I +A G+ +S+F VF+ Sbjct: 208 YLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIV 267 Query: 233 GMTPTEYQERSA 244 G+ P +Y+++S Sbjct: 268 GIPPLQYRKKSR 279 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 97/259 (37%), Gaps = 19/259 (7%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + H + + Y DLV + +++ + + + T+ Sbjct: 33 RHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVF--YTIRF 90 Query: 62 FLPMLKEEALNLHAHKKVSSL---------LVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 L ++L K ++ + L+ + + + ++V NK + Y L Sbjct: 91 EPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYE--L 148 Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPN-----MRTRVCTVINNNIAHEWTLARIASE 167 + I+ L+ L + L + L +I + TL+++A+ Sbjct: 149 AIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANT 208 Query: 168 LLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 + +S + ++ + + + R+ +++ + ++I +A+ CG+ + +YF Sbjct: 209 VGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSR 268 Query: 227 VFRNYYGMTPTEYQERSAQ 245 +F+ Y+ +P++Y+ Sbjct: 269 IFKKYHSTSPSQYRNLYKN 287 >UniRef50_Q5E3W4 Transcriptional regulator, AraC family n=1 Tax=Vibrio fischeri ES114 RepID=Q5E3W4_VIBF1 Length = 284 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 82/252 (32%), Gaps = 10/252 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + R MV R L + +E + Sbjct: 31 HFHNEYELVLFRKNNAKGMVGHFERVIEKNTLWLIPPKMPHAIELLEEKELQCESHIIWL 90 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN--KNLRYAEMLRKRALIFA 120 E + + L S + A+ + L +L + Sbjct: 91 PKEWVENMIFSCTELRRMGELFKRSSNGLCFSTSTAEKVYQLIEKLFKDSILDDLGYLIQ 150 Query: 121 LLSVFLEDEHFIPLLLNVLQP-------NMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 +L D+ PL L Q VC I++N + TL +A L S S Sbjct: 151 ILGCLCSDKETRPLQLFSKQEASDKEGKEKIDLVCQYIDDNYQNSITLLNVAEHLCTSES 210 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + + S+SQ L + R+ A L+ I VA GY + + F +F++Y Sbjct: 211 TIHRLFQSHFGESFSQYLKKLRLNHAANLLTHSRLPIGIVAEQVGYRNQTNFNRLFKDYK 270 Query: 233 GMTPTEYQERSA 244 +TP +Y+++ + Sbjct: 271 QLTPNQYRKKFS 282 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 97/257 (37%), Gaps = 16/257 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + I ++ N GD VF +++ + + + ++L Sbjct: 45 HWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIRAGTS-EECILNSLVFN 103 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEV-----------AQLSQNKNLRYAEM 111 ++ ++ V+ ++ + I ++ SQ + + Sbjct: 104 KNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYE 163 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQP---NMRTRVCTVINNNIAHEWTLARIASEL 168 + R + + + L++ + L N + + ++ N + TL IA + Sbjct: 164 ILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVV 223 Query: 169 LMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +S + + S Q + + R+ A +++ + I ++ + G+ S SYF + Sbjct: 224 NLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKI 283 Query: 228 FRNYYGMTPTEYQERSA 244 F+ + G+TPT+Y+ +S Sbjct: 284 FKRFIGITPTQYRNKSK 300 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 4/240 (1%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 ++ Y + D +A V + + S + Sbjct: 56 PQHILIYCHEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHPW-SIYWIHFTGEQ 114 Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 + + + + I +F E+ + + ++ LL F Sbjct: 115 SHLFSELFNRTIYIDDSPTARFNDRIQLFNEILV-NLEMGYSIENLEYITLCLWYLLGSF 173 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEET 184 F + Q +V + N+ + TL +A + SP+ L ++ Sbjct: 174 RYIPQFREINKPKTQDT-IQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGM 232 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S + ++Q+A QL+ K +A + YF VF Y M+P EY+ + Sbjct: 233 SPINYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKK 292 >UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1T1_CLOCE Length = 265 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 10/238 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 LI Y + G+ + L ++ K + + + Sbjct: 35 REYYLIHYVVSGSGVFERAGKRYPLSKDCLFLIRPYELTFYKADKENPW-EYIWIGFDGS 93 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 ++ + N + ++ + S +EV +NL+++ + IF + S Sbjct: 94 LVPDLLKNSGFSDDICTMHIPSLSTTFLSMKEV------ENLQHSSEIFLCGKIFEMFSY 147 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEE 183 E+ F P R I +N A+ ++ IA+ L + L + + Sbjct: 148 LSEE--FSPTPKGSTTSVYCKRAKDYIMSNYANHISVESIANMLGIDRRYLCRIFYKYTG 205 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 ++ + R+++A L+ HG+++ S GY + F +F+ YG+ P+ Y+ Sbjct: 206 STPQNFIVNYRLEKAAFLLSKHGYTVAEAGRSTGYDDIYNFSKMFKKKYGVPPSRYKN 263 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 91/258 (35%), Gaps = 10/258 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + + + + GD +F ++ ++ K + Sbjct: 37 HWHKEIEIINIYQGTLYVEIENKKFILSKGDSLFINSEEMHFMKMNTK-EECVIISFVFN 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA------EMLRKRA 116 ++ + N K + L+ + + +E ++ Y+ E++ + Sbjct: 96 KSLICGDKGNNIEQKYIDPLINCKELSALELTKEDSKKLAQAYYSYSNNILGYEIIVRNI 155 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPN--MRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 L LL++ +++ + N + R+ I N + + +LA IA E + Sbjct: 156 LSEILLNIIRKNQKLLEKSSNNSNTDKERIKRMLAFIYKNYSEDISLADIAKEAFIGERE 215 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + S + L + R+ A +++ I + + G++S SYF VF G Sbjct: 216 ALRCFARTIGISPIEYLLKYRIYTAAEMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLG 275 Query: 234 MTPTEYQERSAQRLSNRD 251 TP EY++ + Sbjct: 276 TTPREYRKNKVKSDIKNK 293 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 88/239 (36%), Gaps = 6/239 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ + LI Y NG+ GD + + EN + + + Sbjct: 39 AIRDHYLIHYILAGKGKFHANGKIYELVTGDGFLILPDMVTFYEADENEPWT---YVWIG 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 +K A A+ +++L+ + S + + ++ LR + + +L Sbjct: 96 FRGIKAAAYLESANLNMNNLIFNCTSEILK--EYFFKIMNANLYSSGYELRLQGYLSIIL 153 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 S ++ L N + I N + ++ +A + ++ + ++ Sbjct: 154 SELIDISAMDILDTNKHSDIYVRKALQYIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKH 213 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 S + + ++ +A + + + +I ++ S GY+ F VF++ G++P Y+ Sbjct: 214 IGISPKEYIIRYKIGKACEFLKNNSLTISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 90/245 (36%), Gaps = 10/245 (4%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 +++ + ++ GE G ++ ++ + E + L Sbjct: 39 DFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYH-QELFEANTNCRELHIGLTNLN 97 Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVF 125 L + ++L +D + + + + K ++L+ LL + Sbjct: 98 LFSNVKKDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTYNQTSPFMLKSLVMKLLVLL 157 Query: 126 LEDEHFIPLLLNVLQPNMRTR--------VCTVINNNIAHEWTLARIASELLMSPSLLKK 177 + + + + + ++R + + N + +L ++ + +SP + K Sbjct: 158 YREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDISLYTLSKNMYLSPVYISK 217 Query: 178 KLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 +E S L + R+ +A +L+ SIK +A GY YF +++ YYG++P Sbjct: 218 IFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYSDPYYFSKLYKKYYGVSP 277 Query: 237 TEYQE 241 + + Sbjct: 278 NKSRN 282 >UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35ADD Length = 304 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 98/250 (39%), Gaps = 7/250 (2%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 ++ H + I Y +NG+ + G + ++ I + E V Sbjct: 31 LEHWHRSIEIDYLLDCEADFYINGKKKQVAAGSITLINSGDIHALEPREVPVDTEDKIHG 90 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM---LRKRAL 117 + L + E + + + + +EV L E L+K A+ Sbjct: 91 ISLFISYEFLKKICPEIDQITFELEGQEERLKELKEVFNSLIRLELAPPEEYGYLKKNAM 150 Query: 118 IFALLSVFL---EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 + +L+ + L ++ + + + V + N TL +A +S Sbjct: 151 LHSLMYLLLTYFKEPRNQSSVKSQKYIDRLRVVLDYVEENYREPLTLQGVADHFSVSMEY 210 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 L + L++ ++ L + R+ +A + ++ +S+ +A+ G+ I VFR+ YG Sbjct: 211 LARILKKYTGNTFKTHLNQVRVSKAFRDLLETDYSVLEIAMRNGFSDTRSLINVFRDTYG 270 Query: 234 MTPTEYQERS 243 MTP++Y++++ Sbjct: 271 MTPSQYRKKN 280 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 91/263 (34%), Gaps = 18/263 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + Y + E GDL+F + I ++ V L Sbjct: 36 HWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNKGMIHTGFA-DDEHQVEYYALVFH 94 Query: 63 L---------PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ--LSQNKNLRYAEM 111 + + K+ +L+ + + + +++ + Sbjct: 95 SVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQ 154 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQ-----PNMRTRVCTVINNNIAHEWTLARIAS 166 + ++++ LL H + + + + + + T+ + A Sbjct: 155 VAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFKELIAFVERHYPEKLTVQQAAG 214 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 + +S + ++ ++ + + R+ A QL++ I +A G+ SV+YF Sbjct: 215 IVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFS 274 Query: 226 YVFRNYYGMTPTEYQERSAQRLS 248 +FR Y +P++ ++R A+ LS Sbjct: 275 QMFRQYKRHSPSQCRKRYARGLS 297 >UniRef50_A6LE78 Putative transcriptional regulator n=6 Tax=Bacteroidales RepID=A6LE78_PARD8 Length = 294 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 13/256 (5%) Query: 3 SLHGNCLIAYARHKYI-LTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF-VSRDTLS 60 +H + Y + + +V + DLV + + T+ Sbjct: 34 HVHMEFELNYLENAAGAIRIVGDSVEEIDDLDLVLIAGGTKHAYSNHKCPCNGIFEITIQ 93 Query: 61 LFLPMLKEEALNLHAHKKVSSL------LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 + H LV + + ++ LS + + L + Sbjct: 94 FHKSLFDSLINRRHFKTMKDMFDNASSGLVFSREMILGIQDKLRMLSNDNKPDSFKNLLR 153 Query: 115 RALIFALLSVFLEDEHFIPLL----LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 I +LS+ + N + + ++ N TL+ +A M Sbjct: 154 LVEILKILSLDKAARRLNAVNTVKNYNNNDTDRLDSIMLYLHENYQKRITLSEVAKLTNM 213 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S + L + L++ ++ L E R+ A+ + SI + CG++++S F VF+ Sbjct: 214 SDASLMRFLKKWTGKTFIDNLNEIRVAEAVCRLTDTSDSISEICYRCGFNNLSNFNRVFK 273 Query: 230 NYYGMTPTEYQERSAQ 245 G TPTEY+E+ ++ Sbjct: 274 RRRGSTPTEYREKYSR 289 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 98/258 (37%), Gaps = 17/258 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF-----VFVSRD 57 H + V + +F GD+V ++ V + E + + Sbjct: 31 HFHNEYQLVIVLEGTGTRFVGDDISHFEAGDMVLTGSNLPHVWRNDETYFQGLSLVTHCI 90 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-----LSQNKNLRYAEML 112 + L ++ E LN K + LL R + + E+ + L+ + + Sbjct: 91 VIYFSLDFMEGEFLNKEEMKGIRELLDRS-HRGLEISGEIRDTVKKIMCDMLRLKGFDGV 149 Query: 113 RKRALIFALLS----VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 I +LS F+ E ++ + + + + I +N + L +AS Sbjct: 150 LSLLQILNILSSQKLKFINKEGYLNTVTDS-DSKRMRTIHSYILDNFKGDIRLEEVASLA 208 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +SP+ + + ++S + E R+ A +L+ + SI +A CGY+++S F Sbjct: 209 NLSPTSFSRYFKSHTNKTFSNFVAELRIGAACKLLHSNDLSILGIAHECGYNTLSNFNKK 268 Query: 228 FRNYYGMTPTEYQERSAQ 245 F+ +P Y++R + Sbjct: 269 FKELTNDSPLRYRKRYQK 286 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 78/244 (31%), Gaps = 5/244 (2%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPML 66 + I Y +G G +V +I+ + + Sbjct: 67 DYQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKEIQKYVYYVED-HPEVFWIHFTGYDV 125 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFL 126 K +F+++ + Q Y + + A +F ++ + Sbjct: 126 KNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQQCEYGYEDYI---ASLFNIILFLV 182 Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETS 185 + P N N + ++ A L +S + + ++ + S Sbjct: 183 SRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKIS 242 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 +Q + RM A L+ ++I +A GY + YF VF+ YG++P +Y++ + Sbjct: 243 PAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLEE 302 Query: 246 RLSN 249 Sbjct: 303 STEK 306 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 13/249 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I + Y +V F+ DLV + K V + F Sbjct: 32 HYHSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGPNLPHAWK--GEIVEGNHVVTIQF 89 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM------LRKRA 116 L + L+ + I + + K L+ M L + Sbjct: 90 SDKLLNFPILEKRLFSPIKQLLLDSQKGISFSENTMLAMKEKILQLTRMQGFHTVLEFLS 149 Query: 117 LIFAL----LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 +++ L + + + + + + +VC I N L +A+ + MS Sbjct: 150 ILYDLSTADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSE 209 Query: 173 SLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S ++ ++ + R+ RA Q++ ++ + SCG++++S FI +F+ Sbjct: 210 SAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKK 269 Query: 232 YGMTPTEYQ 240 G TP+EY+ Sbjct: 270 KGNTPSEYR 278 >UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3X5_9BACT Length = 286 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 9/231 (3%) Query: 12 YARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEAL 71 Y G V + E+ S LF+ + E + Sbjct: 58 YTLSGMGRLRFGENEYPIPPGSAVLLVVPENHCYYLPED----SPYWRFLFVSVYGSELV 113 Query: 72 NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN-KNLRYAEMLRKRALIFALLSVFLEDEH 130 L + S + D PV +L + + + R A + + + Sbjct: 114 RLVTDFRRSHGFLLQHGTDSPVVASAWELLKKCREKKLDNRYRASAAAYDFVMSLFSEPA 173 Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQL 189 Q + RV N++ ++ +A S ++ ++ E S + Sbjct: 174 G---RGTHAQDDFLKRVHAYALANLSRPLSVGDLADAAGCSRWHFSRRFQQLEGKSPHEF 230 Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 +T+ +M+ A++L+ S+K VA +CG+ SYF VFRN+YG++P ++ Sbjct: 231 VTDLKMRLAVRLLQTTNGSVKEVAENCGFEDASYFCKVFRNHYGVSPAGFR 281 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 16/262 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC-----VENFVFVSRD 57 H I Y T V+GE GDL+F + V + + + D Sbjct: 67 HTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLFLNIQTGHVISVDSWDDIVFNILIKPD 126 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 L L L E S + + + +++ + E LR+ Sbjct: 127 FLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYLLFQENTDEIASTADRIVIEYLRQDPF 186 Query: 118 IFALLS---------VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 ++ + E+ P + + ++N+ A TL A Sbjct: 187 AMKVIEAQFVTLVSLLARENRRQAPTGETIPGKAFVPEILQWLSNHYAGA-TLKSTAEHF 245 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 + S L ++E ++ +++ + +++ A + + S++R++ GY +YF V Sbjct: 246 HYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYLKETSLSVERISDQLGYKDAAYFCRV 305 Query: 228 FRNYYGMTPTEYQERSAQRLSN 249 F+N G TP+EY+ + S Sbjct: 306 FKNTTGATPSEYRRSQQENSSR 327 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 105/259 (40%), Gaps = 16/259 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H +Y+ + ++ + E + G+ + +++ + K +N + ++ Sbjct: 46 HWHKEVQFSYSLYDKVVVFIEDEEIILSPGEGIMINSNVLHQIKPYKN-IDCMMFSIDFD 104 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV-------------FQEVAQLSQNKNLRYA 109 ++ +L K +S ++ + + I + ++V LS K+ Y Sbjct: 105 STLIGGSEESLIEKKYLSPIIESNNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYE 164 Query: 110 EMLRKRALIFAL-LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 ++ I L L ++++ I + I + A L IA Sbjct: 165 LEMKNYLSIVWLNLIKEIKEDIKISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAA 224 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +S S + + + + + L E R+ +A +L++ + SI +++ G++ +SYF V Sbjct: 225 NISKSECCRSFKRILKVTPFEYLMEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKV 284 Query: 228 FRNYYGMTPTEYQERSAQR 246 F+ Y +P+EY+ + +R Sbjct: 285 FKKYRNCSPSEYRTKYCRR 303 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 92/257 (35%), Gaps = 15/257 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV------DKCVENFVFVSR 56 H + + +V + FN D++ A+ V E+ + Sbjct: 31 HFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPHVLRSDTDYYQPESTRRATS 90 Query: 57 DTLSLFLPMLKEEALNLHAHKKVSSLLVH-HCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 ++ L++ LNL + +++LL + E A +++ + Sbjct: 91 VSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTENALTQLLEDIPEKRPFEQL 150 Query: 116 ALIFALLSVFLEDEH-------FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + +L + +V + I A +L +A+ Sbjct: 151 LGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQVFSYILQRYASPISLDDVANVA 210 Query: 169 LMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 ++P + R+ ++SQLL E R++ A + + +I ++A++CGY ++S F Sbjct: 211 NLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQENISQIALNCGYTNLSNFNRQ 270 Query: 228 FRNYYGMTPTEYQERSA 244 F+ GM P EY Sbjct: 271 FKEIVGMPPGEYIRSYR 287 >UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUA4_CHRSD Length = 303 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 85/252 (33%), Gaps = 12/252 (4%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCV---ENFVFVSRDTLSL 61 H + R+ V F G+LV + V RD + Sbjct: 44 HPEYELHLIRYSEGNYFVGDYIGRFGPGNLVLVGPNVPHAWLSDPDDSRSVIKGRDVVLQ 103 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI--F 119 F E + L S L+ + + E A + E L+ Sbjct: 104 FKGEWLEHMMALCPELNCLSTLIEDSRQGVAFQGEEATRCGELLITMGEQDHAGRLLTML 163 Query: 120 ALLSVFLEDEHFIPLLLNV------LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 +L + ++ + + I+++ E ++ +A+ MSPS Sbjct: 164 TILRGLSQCDYATLSSREYGLEATGVSSAQVDAILRYIHDHFHEELRMSALAARNGMSPS 223 Query: 174 LLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + ++ L R+ A QL++ SI + GY+++S F FR Sbjct: 224 SFSRFFKHATGDTFVAFLRRIRIGHACQLLLEGRQSIADICFQVGYNNLSNFNRHFRELK 283 Query: 233 GMTPTEYQERSA 244 GMTP +YQ+ +A Sbjct: 284 GMTPRQYQQSTA 295 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 9/248 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNG-----EYRYFNGGDLVFADASQIRVDKCVENFVFVSRD 57 + + L Y M + + G QI + + Sbjct: 36 ATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQINTYIADDKLPW-EYI 94 Query: 58 TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL 117 + +KE K H + +E+ ++++ + ++ L Sbjct: 95 WIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPSESPYHLIGHMYL 154 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 L + +P + I N ++ ++ IA ++ S L K Sbjct: 155 FLDYLMQSAKSSKLVPG--GKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGINRSYLGK 212 Query: 178 KLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 + S + L RM +A +L+ + SI V + GY + +F F+N YG+ P Sbjct: 213 IFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFKNIYGVAP 272 Query: 237 TEYQERSA 244 E++ Sbjct: 273 REWRNEHK 280 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 106/251 (42%), Gaps = 15/251 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + H + + Y + N + GD++ ++ + + + N + + + Sbjct: 35 EHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRF--YLIRI 92 Query: 62 FLPMLKEEALNLHAHKKVSSL---------LVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 LP L + ++L K +S L L+ + + + + + K + Y + Sbjct: 93 DLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAV 152 Query: 113 RKRAL---IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 + + + + + L + +V +++N + + +++ Sbjct: 153 KANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAH 212 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 +SP + ++ + ++ + E R++++++L+ +I VA++CG++ V+YF +F Sbjct: 213 VSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLF 272 Query: 229 RNYYGMTPTEY 239 + YG++PT++ Sbjct: 273 KKKYGVSPTKF 283 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 87/243 (35%), Gaps = 8/243 (3%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS---RDT 58 + H + ++N + + + + +N + + Sbjct: 30 EHSHDFHELMIVTKGAGQHILNDVPINLAQNYICYISPKDRHLFEQSDNLHLTNILFQKN 89 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 + P+LK ++ + + V +AQ+ +L E + Sbjct: 90 KLAYSPLLKSVLPKESDAQQSWYISTETMKK---VCTLMAQIEHESSLHSVESRLMTEAL 146 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 F L V + N ++ ++ I NN A E+ + I+ + +S L ++ Sbjct: 147 FQQLVVEISRGRLTSQSNNASDNSIL-KIIDWIQNNYAEEFNVGDISDQFEISSRTLSRR 205 Query: 179 LRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 +++ S++ + R+ A+ L+ S+ +A GY +YF F+ + TPT Sbjct: 206 IKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIAFQVGYKDSNYFSTKFKRFTNKTPT 265 Query: 238 EYQ 240 E++ Sbjct: 266 EFR 268 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 82/253 (32%), Gaps = 13/253 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF--VSRDTLS 60 H + + Y + VNGE GD V + + V D Sbjct: 29 HCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTLIRNSDCKLLGVQMDLSV 88 Query: 61 LFLPMLKEEALNLHAH------KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 L K + V S + E+ Q K Y + Sbjct: 89 LDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSEILVEYQKKQPGYE--MYI 146 Query: 115 RALIFALLSVFLEDE--HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 + I L S + + +N V + +I E ++A A MS Sbjct: 147 KGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIETELSVAAAAKIACMSY 206 Query: 173 SLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + ++ ++ + R++RA +L++ +I +A G+ SV+YF VF+ Sbjct: 207 YHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAFETGFGSVAYFNRVFKKE 266 Query: 232 YGMTPTEYQERSA 244 G P Y+++ Sbjct: 267 TGQAPANYRKKMR 279 >UniRef50_P33234 HTH-type transcriptional regulator adiY n=102 Tax=Enterobacteriaceae RepID=ADIY_ECOLI Length = 253 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 132/243 (54%), Gaps = 3/243 (1%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADA-SQIRVDKCVENFV--FVSRDTLSLFL 63 C++ + + E + + + I + N + +S D + +L Sbjct: 8 PCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYL 67 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 L ++ + ++ ++ ++ VF+ AQ S +E R RAL+F +LS Sbjct: 68 RFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLS 127 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183 FL+ + F+ L++ +L+ + V +I ++I +W L+ +AS L +SPSLLKKKL+ E Sbjct: 128 RFLDSKKFVSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSEN 187 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 TSYSQ++T CRM+ A+ +++ G +I +V+ SCGY+S SYFI VF+++YGMTP Y + Sbjct: 188 TSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQH 247 Query: 244 AQR 246 +R Sbjct: 248 RER 250 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 15/257 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I + I VN N +F +A + + +V R ++ Sbjct: 42 HWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLR-SIVFH 100 Query: 63 LPMLKEEALN-----LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN-----KNLRYAEML 112 ++ + + +L I ++ S + N + Sbjct: 101 PRLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEI 160 Query: 113 RKRALIFALLSVFLEDEHF---IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 R + L+ + L + P + N+ + + I + + T++ +A L Sbjct: 161 YVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVAL 220 Query: 170 MSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 +S S + + ++ +Q L + R+Q+A Q+++ + +A CG+ S SYF F Sbjct: 221 ISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTF 280 Query: 229 RNYYGMTPTEYQERSAQ 245 R G TP EY++R Q Sbjct: 281 REQIGCTPLEYRKRDQQ 297 >UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302 RepID=D1QQ68_9BACT Length = 291 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 5/241 (2%) Query: 6 GNCLIAYARHKYILTMVNG-EYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 + Y + + E R GD + +N + S + Sbjct: 54 NEYQLLYITAGEGVFKSSSVEERRIKAGDFFLLFPGEWHTYHPSKNIGWQSY-WIGFKGE 112 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 + N V + R ++ +Q + + L ++ L+ + Sbjct: 113 NMDARVKNGFLSPTKPVYHVGYMDRLEDLYHYALDTAQEEAVHTQRTLA--GVVNLLIGM 170 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EE 183 E I L N NM R I + T+ +IA+++ +S S +K +E Sbjct: 171 MYSLERNIELGKNQEHVNMVNRARKRIREALEENLTIQQIATDMGVSYSNFRKLFKEFTG 230 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 S + E R+QRA +L+ S+K++A + S YF F+ + P+E++E++ Sbjct: 231 VSPALYQQELRLQRAKELLSTTNLSVKQIAYKLCFDSPDYFSAKFKAKINLRPSEFREQT 290 Query: 244 A 244 Sbjct: 291 K 291 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 91/262 (34%), Gaps = 20/262 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC--VENFVFVSRDTLS 60 H +AY + + GD + + + ++ VF + Sbjct: 73 HNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSKE 132 Query: 61 LFLP--------------MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNL 106 +F + L+ + P+ + + + +L Sbjct: 133 IFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDDL 192 Query: 107 RYAEMLRKR-ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 Y +++ +FA L+ + + L + + + ++ + +L +A Sbjct: 193 CYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYH-MQQHL-RQLSLESLA 250 Query: 166 SELLMSPSLLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 SPS + + R SY+++L R+Q A L+ + +A S G + SY Sbjct: 251 EAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYL 310 Query: 225 IYVFRNYYGMTPTEYQERSAQR 246 +F+ YG+TP +Y+++ Q Sbjct: 311 NKIFKKKYGLTPLQYRKQFQQE 332 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 15/251 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 HG I Y + + GDL+ + + + R ++ Sbjct: 35 HYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGDPEH-ERIVINFS 93 Query: 63 LPMLKE--------EALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK 114 L + + + + L V + + + ++A + ++ Y ML Sbjct: 94 DSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADEIRERSASYEHML-- 151 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRV---CTVINNNIAHEWTLARIASELLMS 171 + L+ LL H L NV + ++ I+ + A + TL ++ +S Sbjct: 152 QVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKITLQGLSETFYIS 211 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 P L + +E + L R++ A +L+ I +A S G+ S+++F F+ Sbjct: 212 PFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGFESLTHFDRTFKK 271 Query: 231 YYGMTPTEYQE 241 MT ++Y++ Sbjct: 272 IMNMTASQYRK 282 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 94/246 (38%), Gaps = 8/246 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ N LI Y VNG+ + + K ++ + ++ Sbjct: 44 AVRNNYLIHYIIDGEGTYYVNGQSYRLRKNQGFLICPNTLTYYKASKDNPWT-----YMW 98 Query: 63 LPMLKEEALNLHAHKKVS-SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + +A + ++ L+ + D + + ++ + + Y+ L + L++ Sbjct: 99 IAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNELEIQGLLYLF 158 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLR 180 LS ++ L N + + + NN + + + +A+ + ++ S L + Sbjct: 159 LSKLAMSKNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFVGLNRSYLTHLFK 218 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + + S + L R+ A L+ S+ ++ S GY+ F VF+ G++P Y Sbjct: 219 KSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKVFKKVKGISPKTY 278 Query: 240 QERSAQ 245 ++ + Sbjct: 279 RDNFLK 284 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 9/245 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I VN GDL+F +A + + D L L Sbjct: 28 HRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASD------DNLVLC 81 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL--IFA 120 L EE +N+ S+ ++ D+ Q + ++ + L + Sbjct: 82 LQHRFEELVNVSVAPGTSNPVLKARLNDLRTTLAHLWWEQKYQPAHWQLATENGLAQLQL 141 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 +L + P ++ + + +L ++ +S + L + Sbjct: 142 ILLRYFSSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSETYLSHYFK 201 Query: 181 -EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 + ++ + LT+ R++R L ++ ++ +A+ G+ S+ F F+ Y TP+E+ Sbjct: 202 DKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREYQCTPSEF 261 Query: 240 QERSA 244 +++ Sbjct: 262 RQQQQ 266 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 88/248 (35%), Gaps = 13/248 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y +++G+ D+V + + + + + L Sbjct: 68 HTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPL---EYIVLG 124 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRK--RALIFA 120 + + + K S+ + +C + + + + R + + L+ Sbjct: 125 VSGI-----EILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEV 179 Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRT--RVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 LL + + + + R + ++NN E +L +A ++ L Sbjct: 180 LLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHT 239 Query: 179 L-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + S L R++ + ++ G+S+ +++ G+ S SYF FR G+TP Sbjct: 240 FQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPN 299 Query: 238 EYQERSAQ 245 EY+ + Q Sbjct: 300 EYRRQVRQ 307 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 83/244 (34%), Gaps = 7/244 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ + LI + + + V + G + + + Sbjct: 37 AVRDHYLIHFIYNGRGIFQVGENTYHLEAGQGFLICPDIV-TYYQADRHNPWEYAWIGFH 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 K+ + S +F+E+ + + L+ + ++ LI+ L Sbjct: 96 GLKAKDYLNRANLSLANPVFSDTDGSPLRFIFEEM---TAARKLKRSREIKLIGLIYVFL 152 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 S +E N + N + I N + + IA+ + + S L E Sbjct: 153 SHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHVGLDRSYLWSIFNEF 212 Query: 183 -ETSYSQLLTECRMQRALQLIVIH--GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 TS Q L R+ +A +L+ SI ++ S GY F F+ G++P Y Sbjct: 213 LNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFKKTKGISPLHY 272 Query: 240 QERS 243 Q++S Sbjct: 273 QKQS 276 >UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S1P5_9CLOT Length = 309 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 13/254 (5%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN--------FV 52 ++ H I Y L N GDL+ D + I + K V + Sbjct: 28 VKHFHNQYEIFYIIEGERLFFFNNREYVARSGDLILVDTNLIHMTKSVTAEDTGHNRVIL 87 Query: 53 FVSRDTLSLFLPMLK--EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAE 110 +VS D + F + H H V L + + ++ + K Y Sbjct: 88 YVSYDRMKAFDGQYPSLQLVRFFHEHYGVYHLDKEQQALFLNFYRNLRIAMTEKAHNYKV 147 Query: 111 MLRKRAL--IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + L +F + S + E P + + + ++ N +L +A+ Sbjct: 148 GIDLETLTWLFKITSYVSKQEGASPHSSDHPKYRTAYAIADYLSENCEQNISLEELAAHF 207 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +S + + +E + ++ R+++A +L+ SI +A GY S++YF + Sbjct: 208 YLSKYYVCRTFKEITGYTVTEYTNIHRIRKAKRLLEETDMSISEIAHELGYESLTYFERM 267 Query: 228 FRNYYGMTPTEYQE 241 F+++ ++P +Y++ Sbjct: 268 FKSFMTISPLKYRK 281 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 15/256 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + LH I Y ++ + GG LVF D +QI R +SL Sbjct: 29 KHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGPGSH-ERILISL 87 Query: 62 FLPMLKEEA-----LNLHAHKKVSSLLVHHCSRDIPVFQEVA----QLSQNKNLRYAEML 112 + ++L + +S +++ + + + + K + + Sbjct: 88 DQNPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELHEKKPGFRHIT 147 Query: 113 RKRALIFALLSVFLEDEHFIPL----LLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 + +L+ L + V + I ++ +L IA+ Sbjct: 148 MSKLSQLFILAQRHMSGPSSLSADLPLSTQPKHRKVDEVASYIIDHYDKALSLEIIAAHF 207 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 ++ L + +E + ++ + R++RA +L+ SI V+ S GY +++YF V Sbjct: 208 YVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVSESVGYETITYFERV 267 Query: 228 FRNYYGMTPTEYQERS 243 F Y +P+ Y+++ Sbjct: 268 FHQYTQTSPSGYRKQY 283 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 96/251 (38%), Gaps = 16/251 (6%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 ++ + H + E G +V + ++ + +F Sbjct: 55 EEWILIFCTHGKGVVKSATEEWLIESGSIVLLPPGKEHTYYAFDDDPWD------IFWAH 108 Query: 66 LKEEALNLHAHKKV---SSLLVHHCSRDIPVFQEVAQLSQNKNL-----RYAEMLRKRAL 117 +++N + ++ + LV + + + ++Q Q Y + + Sbjct: 109 FNGDSVNEYIPQEALQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQV 168 Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177 + A L+ ++ + +P + T+ I ++ + +L+ + L +S S L + Sbjct: 169 LGATLA-YVSLQSVLPHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSR 227 Query: 178 KLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236 R+ TS +Q + + +M++A + ++ ++A GY YF +F+ G +P Sbjct: 228 IFRQTVGTSVNQFILDIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSP 287 Query: 237 TEYQERSAQRL 247 ++++ RL Sbjct: 288 RVFRKQEKNRL 298 >UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL0_9CLOT Length = 282 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 98/247 (39%), Gaps = 8/247 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ + LI Y + + GD +++ ++ + + Sbjct: 42 AVRDHFLIHYITSGKGVYDSGSGKYSLSAGDGFLVVPNRLITYWADQSDPWEYY-----W 96 Query: 63 LPMLKEEALNLHAHKKVSSL-LVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + +A L +S+ + H +D +++ + + R ++ R +A + + Sbjct: 97 VGFNGTDAERLVCEAGLSAEQPIFHYDKDSLYREKLLNIYRLNGNRPSDQARMQAGLLSF 156 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 ++ + D + + + I+ N + + IA+ + +S S L + + Sbjct: 157 MAAMM-DRRPLDIQEKKSGYEYVKKSLQFIDYNYSRSIDVDDIAANVGISRSHLYRLFMK 215 Query: 182 E-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++ LT R+Q+A L+ S+ A S G+ YF VF+ Y G++P++Y Sbjct: 216 HISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKKYKGLSPSQYS 275 Query: 241 ERSAQRL 247 +RS ++ Sbjct: 276 KRSHEKK 282 >UniRef50_A1ZWA4 Activator protein MtlR n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWA4_9SPHI Length = 290 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 11/255 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD-KCVENFVFVSRDTLSL 61 H + + V F GDLVF E+ ++ + Sbjct: 31 HFHEELELTWIIQGSGTRYVGNHITTFTDGDLVFLGEKVPHAWISYDEDVKHNTKAVVLQ 90 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL--IF 119 F A ++H + I ++ + +N L + L + Sbjct: 91 FRKDFLGNAFWNTPEVDEIKKMIHLSQQGIHFQGDILNILRNDLLTLGKKQGIDRLNGVL 150 Query: 120 ALLSVFLEDEHFIPLLLNVLQPN-------MRTRVCTVINNNIAHEWTLARIASELLMSP 172 +L +H+ PL+ + + N +V I N + L++IA MS Sbjct: 151 KILDTLATWKHYTPLINDEVNINYMTTDFERIEKVMNFIYQNFRSDIKLSKIAEIANMSS 210 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S L++ + S++L E R+ A QL++ +I +A GY+S+SYF F++ Sbjct: 211 SAFCHFLKKRTHKTLSRILNEIRLGYASQLLIKTDKNISEIAYESGYNSISYFNKAFKDI 270 Query: 232 YGMTPTEYQERSAQR 246 Y +P Y+ ++ Sbjct: 271 YECSPKTYRVEIKKK 285 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 88/255 (34%), Gaps = 15/255 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD--KCVENFVFVSRDTLS 60 H + + V F+ GDL F + K + + + + Sbjct: 30 HFHPEYELILILNGSGKRFVGNNIAEFSSGDLCFFGPNLPHTYSNKHIAGPRDIHQIVVQ 89 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120 L + + K + +LL R E Q EM A++ Sbjct: 90 FNEDFLGKGFFDKAPFKPIRALLDKSI-RGFTFTGETLQEVTRMIRAMVEMDET-AVVIQ 147 Query: 121 LLSVFLEDEHFIP----------LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170 LLSV + + RV I N E L IAS + Sbjct: 148 LLSVLYTLAKSAEFELLSSRGFSSKSDRAESERMGRVMDYILRNFREEIPLNVIASVACL 207 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 SP + ++ ++S+ L E R+ A +L+ + ++++ G++++SYF F+ Sbjct: 208 SPEAFCRYFKKYTRKTFSEFLIEVRIGHACKLLQQQLLGVNQISMQSGFNNISYFNRKFK 267 Query: 230 NYYGMTPTEYQERSA 244 + TP EYQ+ A Sbjct: 268 SMTKKTPVEYQKMFA 282 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 88/259 (33%), Gaps = 11/259 (4%) Query: 3 SLHGNC-LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + + Y ++ Y GD++ + + ++ + Sbjct: 32 HAHQDFTELTYILSGTSKYRIDDIYYDVKAGDMIVCNPGVFHQNMLLDGEEPLVEFCTGF 91 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY-AEMLRKRALIFA 120 K N ++ + + + +A + Sbjct: 92 TDFQFKNMPENTIQLSNQGHIVHLSSEAKRETSRLCYDMLAENEAGQVGKYFMLKAQLIQ 151 Query: 121 LLSVFLEDEHFIPLLLNV-------LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 +L + + + P + + R+ + N H+ +L +IA + +SP Sbjct: 152 MLMLLMREVIEAPKVTQKGCNFETYSKSYAVKRIINYLMENYEHKISLDQIAHNMYLSPV 211 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGF-SIKRVAVSCGYHSVSYFIYVFRNY 231 + K +E S L + R+++A +++ SIK +A GY V +F +F+ Y Sbjct: 212 YISKIFKEETGESPINYLIKIRLEKAKEILSEREGGSIKNIANEIGYDDVYHFSKLFKKY 271 Query: 232 YGMTPTEYQERSAQRLSNR 250 +G++P Y++ + + Sbjct: 272 FGISPQNYRKSLIAQRTTE 290 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 9/250 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL--S 60 H + + + GD++ I V + Sbjct: 34 HWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIHELFSPPKGVRIIFLVSLAQ 93 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDI-PVFQEVAQLSQNKNLRYAEMLRKRALIF 119 + L L + +S I + E+ + + L Sbjct: 94 IDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEIRDEYFRNLPYTESSIYAKFLEI 153 Query: 120 ALL--SVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLMSPSL 174 +L + E N Q + +C IN + A +L +AS S Sbjct: 154 LVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINEHYAEPLSLEEVASLAGFSKYH 213 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + ++ +T++ + L + R+ A L+V S+ +++ CG+ ++S F+ +FR G Sbjct: 214 FTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTG 273 Query: 234 MTPTEYQERS 243 TPTE ++ Sbjct: 274 FTPTELRKMY 283 >UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPZ9_AGRRK Length = 312 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 88/261 (33%), Gaps = 12/261 (4%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD--KCVENFVFVSRDTLSL 61 H I R V F GDL ++ ++ RD + Sbjct: 51 FHPEFEIHLIRKSSGTAYVGDYIGDFGPGDLTVIGSNLPHDWVSHIGKDDKIPGRDLVVQ 110 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM--LRKRALIF 119 F P +A K + L+ R + AQ + + + L + Sbjct: 111 FDPDKLRQASQHLPEIKRLNSLLTTAQRGLRFSGATAQRAAHLLETIGKFDGLERLIRFL 170 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNM-------RTRVCTVINNNIAHEWTLARIASELLMSP 172 +L + + + L PN+ R IN++ + L +A+ MS Sbjct: 171 RVLELLADSKECDVLSSPEFAPNVDAITLNTMQRAILHINSHFTEKIQLPDVAAVANMST 230 Query: 173 SLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 + + + S++ + R+ RA +L+ + + GY ++S F F + Sbjct: 231 NRFSRFFIKNTGRSFTDYVVSLRIGRACRLLSESDKPVIDICYEVGYTNLSNFNRSFLRH 290 Query: 232 YGMTPTEYQERSAQRLSNRDS 252 G +P+ Y+ + + + DS Sbjct: 291 VGKSPSAYRRAAHGKRVSTDS 311 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 18/257 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H IA + VN GD +F +++ + EN + Sbjct: 42 HWHPELEIACILEGTMTYQVNQNLYQLGKGDCLFVNSNALHSGCMFENN-DCKYIVATFN 100 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC-------------SRDIPVFQEVAQLSQNKNLRYA 109 ++ + LL + +E+A +N Y Sbjct: 101 PSLIYGYEKSDIDTNYTFPLLNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYE 160 Query: 110 EMLRKRALIFALLSVFLEDEHFIPL---LLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 ++ R L +P L Q + I+++ TL ++A Sbjct: 161 LHIKSRLCELWALLFEEFQRSQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAE 220 Query: 167 ELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 S S + ++ + + L R+Q++L L+V SI +A G+ SY+ Sbjct: 221 SCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYS 280 Query: 226 YVFRNYYGMTPTEYQER 242 VFR Y G +P EY++ Sbjct: 281 EVFRKYMGCSPREYKKN 297 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 84/244 (34%), Gaps = 6/244 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + H I H + NG+ +GG + F + + EN + S Sbjct: 41 EHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSP 100 Query: 62 FLPMLKEEALNLHAHKKVSSLLVH---HCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 L ++ H V +L + + ++ Sbjct: 101 QAFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEML 160 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 F L + L + + ++ + ++ A E ++A + ++S L ++ Sbjct: 161 FMQLLILLRSGSQMQGGGHA--DERLNQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQ 218 Query: 179 LRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 L++ + + L R+ +A L+ S+ +A CG+ ++F +FR + +P Sbjct: 219 LKQRTGLTPQRYLNRLRLMKARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPR 278 Query: 238 EYQE 241 + ++ Sbjct: 279 DIRQ 282 >UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P929_9FIRM Length = 279 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 83/242 (34%), Gaps = 6/242 (2%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 L + L+ + + +G GD S + + + Sbjct: 40 LRDHFLVHHVIVGRGVYTADGVTHDVKAGDTFIIYPSVVVTYSADAADPW-EYCWVGFNG 98 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123 E L + V + + + +A + + + LR +++ L+ Sbjct: 99 A---EARLMIAQTPFTRQRPVVRFEQPDEIREAIADIYRASGTTRSSELRAIGMLYIFLA 155 Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE- 182 + +E + P L I +N + + +A+ + +S S L + + Sbjct: 156 LLIE-QAGAPAPAAGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGISRSHLYRVFMQHI 214 Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 T ++ L + R+ +A +L+ + VA S GY YF VF+ GM P+ Y + Sbjct: 215 STPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFKRITGMPPSAYIKA 274 Query: 243 SA 244 Sbjct: 275 HQ 276 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 4/250 (1%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 H + Y L V+ + G+++ + R + Sbjct: 29 SHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQAFQRIVVYF 88 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 + + + + L + + + ++ + L + L Sbjct: 89 TEKAIG-DLTLIEKMRHAGGLYHPDRRMSHQIHGLLGMMLMEQSET--DDLHDITMETIL 145 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 ++ L + L + + +V I+++ + L +A +S L ++ ++ Sbjct: 146 RAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLDELAGRFYVSQYYLCREFKK 205 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + +Q + R+ A + I+ +VA +CG+ S ++F VFR+ GMTPT ++ Sbjct: 206 YTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRVFRSVTGMTPTAFR 265 Query: 241 ERSAQRLSNR 250 + +QR Sbjct: 266 KSCSQRQVTE 275 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 105/263 (39%), Gaps = 21/263 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCV--ENFVFVSRDTLS 60 H + Y + + + GD++ + + + + E+ VF + S Sbjct: 68 HNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCVFNIMLSRS 127 Query: 61 LFLP--------------MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNL 106 LF + ++ ++ + + + ++ Sbjct: 128 LFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLIYEFSDRGP 187 Query: 107 RYAEMLRKRAL--IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164 + + + L +F+LL+ +++ I ++ + + + IN N + +LA + Sbjct: 188 TGSASVVQHLLAVLFSLLARIYAEQNQIHTDMHTKLSPLLD-IISYINQN-SRTVSLAVL 245 Query: 165 ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 + S + + +++ S++QL+ ++QRA +++ G S+ +VA G+ Y Sbjct: 246 EEKFSYSAGYISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAGFQDSQY 305 Query: 224 FIYVFRNYYGMTPTEYQERSAQR 246 F +F+ +G+TP++Y++ ++ Sbjct: 306 FSRLFKEKFGLTPSQYRKLCQEQ 328 >UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RI67_9MOLU Length = 263 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 90/240 (37%), Gaps = 12/240 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y VNGE ++ N LV +++ I + +E+ + TL L Sbjct: 34 HWHDEIELIYCNQGSFELSVNGEKKFVNTKQLVLINSNSIHRLRFLEDQTKI--ITLLLS 91 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 + E L L+ + + + E L + + Sbjct: 92 TELFDEFKLVQCEF---DLSLIKDQEQLEQLIIYLGDHLDQ------ETLVIHNRMMQIY 142 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR-E 181 + LE+ L + + + ++ T I + E +L +A+ S L + + + Sbjct: 143 ELLLEECSVYKLAITKKKLPIIKQIVTYIEQHYDDELSLTILANHFHFSEVYLSRMFKEK 202 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + + R+ A ++ +I +A++ G+ +V F +F+ YY P++Y++ Sbjct: 203 TGITLLSYINKIRLNHAYNDLMNTSLTINEIALNHGFKNVKAFNKIFKEYYHDIPSKYRK 262 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 89/258 (34%), Gaps = 10/258 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + + + G+ +F ++ ++ + + Sbjct: 43 HWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFINSEEMHFMRMDAR-EECRIISFVFD 101 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF--- 119 ++ E + K + L+ + + +E +Q YA+ + ++ Sbjct: 102 KVLICGEKGSKIDQKYIIPLINCKELSALELTEEDSQKLIQGYFSYADEILGYEIVIRNV 161 Query: 120 ---ALLSVFLEDEHFIPLL--LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 LL++ E++ + N + T I+ N + + +L IA E + Sbjct: 162 LSEILLNIVRENQELLEKSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGERE 221 Query: 175 LKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + TS + L + R+ A +L+ + + + G++S SYF VF G Sbjct: 222 ALRCFARTIGTSPIEYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLG 281 Query: 234 MTPTEYQERSAQRLSNRD 251 MTP EY++ Sbjct: 282 MTPREYRKNKLNLDIKNK 299 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 88/251 (35%), Gaps = 12/251 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL- 61 H A ++G+ GD + + K + + ++ Sbjct: 33 HAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFS 92 Query: 62 ---FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 F + + K+ + + + + ++ + ML+ + Sbjct: 93 GVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQ 152 Query: 119 FALLSVFLEDEHFIP------LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 L V + E + + + + ++ + N + +L +IA+ + +S Sbjct: 153 ILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSS 212 Query: 173 SLLKKKLR-EEETSYSQLLTECRMQRALQLIV-IHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + K + E + L RM++A +++ IK VA + GY +F +F+ Sbjct: 213 FYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKK 272 Query: 231 YYGMTPTEYQE 241 +YG++P Y++ Sbjct: 273 HYGISPLYYKK 283 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 91/264 (34%), Gaps = 15/264 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN--FVFVSRD--T 58 H I Y + +V ++ GDLV + + + F Sbjct: 31 HRHPELEITYVPYGTGTRLVGDHVARYSPGDLVLSGENLPHTWLSDDFVGKKFDRHIAYV 90 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL--SQNKNLRYAEMLRKRA 116 + L V L++H R + Q K + + L + Sbjct: 91 IQFSNDFLGSTFFESPELNDVR-LMLHKARRGLLFSPSAVQRVGDIMKLMPEQQGLTQLI 149 Query: 117 LIFALLSVFLED------EHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELL 169 +F L++ E+ + + C IN ++ + A I E+ Sbjct: 150 SLFNCLNLLAEEGGEVLASEGYTPGFDHASDWRIDKACNYINEHLEDPELSHAAICKEVD 209 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 M+PS + + + +Q ++E R+ A +L++ G SI V++ G+ ++S F F Sbjct: 210 MNPSSFSRMFKRATGRTVTQYVSELRIGIACRLLMETGDSILDVSLKSGFDNLSSFNRSF 269 Query: 229 RNYYGMTPTEYQERSAQRLSNRDS 252 R MTP EY+ + + Sbjct: 270 RKIKQMTPREYRSTFLEAHKSAAP 293 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 96/262 (36%), Gaps = 20/262 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVE--NFVFVSRDTLS 60 H + Y R + E + GD++ + + + +F + Sbjct: 73 HNHDYFELMYVRSGSCFNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRE 132 Query: 61 LFLP--------------MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNL 106 LF + +++ + + P +E+ NK Sbjct: 133 LFEQSMLPLLSDNHLISNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQ 192 Query: 107 RYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 Y +++ + + L + + + + + V +N + + + TL+ +A+ Sbjct: 193 GYVQVIE--SALVILFARLGRIFAQENHIESSVSNKLIVDVIVYLNQH-SADVTLSSLAA 249 Query: 167 ELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 E S L K + + S++ +L+ ++++A L+ S +A G+H SY Sbjct: 250 EFGYSSGYLSKLIRKHTGQSFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLS 309 Query: 226 YVFRNYYGMTPTEYQERSAQRL 247 FR+ YG+TP+ ++ S + L Sbjct: 310 RSFRSKYGVTPSSCRDTSRRSL 331 >UniRef50_C6PB97 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PB97_CLOTS Length = 251 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 21/241 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + + + + DL F ++Q+ K ++ S T++LF Sbjct: 28 HFHRAYELIYINNGRLSVSIGKKEYILEQNDLAFIFSNQMHEFKTID----FSDITITLF 83 Query: 63 LP-MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 P ++ + +N ++L H R I F E+ + K++ ++++ Sbjct: 84 SPELIGDFYMNYKGMIPDDNIL--HLDRYID-FNELNSIYS-----------KKSFLYSI 129 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-R 180 ++ + FIP + Q + ++ I N ++ TL +A L L K + Sbjct: 130 CDKLVKQKSFIP-VKQSAQTKVLYKMLLYIEQNYSNVCTLKNVAEHLNYDYPYLSKLFVQ 188 Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 + + ++++ L R+ +A ++ SI +A +CGY+++ F FR M+P EYQ Sbjct: 189 QMDMTFTEYLNNYRISQACYMLKNSNLSIGEIASNCGYNNLRTFHRNFRRITNMSPKEYQ 248 Query: 241 E 241 + Sbjct: 249 K 249 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 9/250 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS--RDTLS 60 H I + G D+ F ++ + + Sbjct: 36 HWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGSPKDCTYECIVFDFNIL 95 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHH----CSRDIPVFQEVAQLSQNKNLRYAEMLRKRA 116 L + L AH+K+S VH+ S I +F + + L L Sbjct: 96 RQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEEGYELSILGSLLLFF 155 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 + ++E + ++ +I + A TL ++ E +SP Sbjct: 156 AALQKNEYYSKEEEYDLKSQKAIEQ--LKASLELIVTDYAKPLTLQELSRECGLSPKYFC 213 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + +E + L R+++A I ++ +A CG++ SYFI F+ Y G+T Sbjct: 214 RFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFNDFSYFIKTFKKYKGIT 273 Query: 236 PTEYQERSAQ 245 P +YQ + Sbjct: 274 PKKYQMMWKE 283 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL--- 59 H + Y ++ +V+ GDL +AS + + V + Sbjct: 77 HKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTVYNILIKPE 136 Query: 60 ---SLFLPMLKEE-------ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA 109 FL ++ E +++ + + H E + Sbjct: 137 LFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENHFK 196 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQP-----NMRTRVCTVINNNIAHEWTLARI 164 ++ +++ +L+ +F+E + + +++ I+++ + ++ ++ Sbjct: 197 DIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY-KDISIKQV 255 Query: 165 ASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223 A P+ L L++ + ++S++L R A + + I + GY + S+ Sbjct: 256 ADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNKSH 315 Query: 224 FIYVFRNYYGMTPTEYQER 242 F F+ G+TP +Y+++ Sbjct: 316 FYRTFKQEMGITPAQYRKQ 334 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 5/242 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC-VENFVFVSRDTLSL 61 H N + Y + + G+ D++F +++ + EN V V S Sbjct: 33 HFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSLTENRVLVLYFPKSF 92 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 F LN + +L + + + ++ S R L + L Sbjct: 93 FASEQVLIQLNTSEEQLDEQVLSNLRTLLMEIYN--LHYSTGTYDYILAQSRIIELKYWL 150 Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 F + P + + I + +LA A S + L + E Sbjct: 151 ARHFSQTAELSPATSRSDRQK-IQTILDFIKEHYTENISLAETARICGYSEAYLSRMFHE 209 Query: 182 -EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 ++++ +++A+ L+ S+ ++ G+ +V F VF+ G TP EY+ Sbjct: 210 YTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVKSFRKVFKEVMGKTPYEYK 269 Query: 241 ER 242 + Sbjct: 270 KS 271 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 93/258 (36%), Gaps = 14/258 (5%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS--RDT 58 ++ H C +A + ++ GE + + GD+ Q+ + + ++ D Sbjct: 40 IEHWHDFCELAMVTGGRGVHVLEGESFHVSTGDVFVLQGRQVHCFRERQGLALINVMYDP 99 Query: 59 LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQ---------EVAQLSQNKNLRYA 109 L LP+ L ++ + R + E + A Sbjct: 100 ERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVERIENESKAA 159 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRT--RVCTVINNNIAHEWTLARIASE 167 + + L+ L+ + + + ++ +++ WTL ++A + Sbjct: 160 QEGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQ 219 Query: 168 LLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 +S S L + R+ S L R++ A +L+ + +A+ CG+ ++F Sbjct: 220 ARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPR 279 Query: 227 VFRNYYGMTPTEYQERSA 244 FR G+TP+ Y+ + Sbjct: 280 QFRKTCGVTPSIYRRQMR 297 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 91/250 (36%), Gaps = 9/250 (3%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 +H L+ G+ + GD F ++ + + ++ Sbjct: 38 VHDYFLLHVVLRGKGSFHCAGKTYSLSAGDSFFIYPKELVTYESDRTDPWY-YTWVAFQG 96 Query: 64 PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ-NKNLRYAEMLRKRALIFALL 122 P +E + + S +V + + Q L L+ A L+ A + ++ Sbjct: 97 PFFEETLRSAGIQPE--SPIVSLGGKGSMIKQLFYDLYSSMTELKVASSLKTNAYLRLII 154 Query: 123 SVFLEDEHFIPLLLNVLQPNM---RTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 S F+E + + V +++ ++ IA+ + + KK Sbjct: 155 SEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAASYGYNRTYFSKKF 214 Query: 180 RE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 +E S S+ L RM++A L+ +I+ VA S GY YF F+ + G+ P+ Sbjct: 215 KEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFSKQFKQWSGVAPSV 273 Query: 239 YQERSAQRLS 248 ++++ + Sbjct: 274 FRQQHLKESE 283 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 92/241 (38%), Gaps = 9/241 (3%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 + LI Y + E D++ + + ++ + + Sbjct: 32 EDLLIFYVNKGAGICHSEYEQHEIKKRDVIILNPGTTITLDPIRKIDWIC-------IAL 84 Query: 66 LKEEALNLHAHKKVSSLLV-HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 + S L V H + + + ++A + ++ R ++++ K+ + ++ + Sbjct: 85 SGVVFTSSQEANSSSQLFVASHPNPTLKYYLDLALIEESNRFRGSDLIMKKLIECVMIHL 144 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EE 183 +E I + N + I N + + TL ++ + ++ L + ++ Sbjct: 145 LRHNELSIKDASLQAKHNEIDVLQNYIRKNYSKKITLEELSDLVDINKYYLIRLFKQQTG 204 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 S L R++ A +L+ ++ ++ G+HS S+F F+ TP++Y++R Sbjct: 205 LSPIDYLIHVRLEEAEKLLAKSNITVSDISDRVGFHSPSHFSKTFKENNHCTPSQYRKRY 264 Query: 244 A 244 + Sbjct: 265 S 265 >UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1MWN3_LEUCK Length = 290 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 94/251 (37%), Gaps = 10/251 (3%) Query: 2 QSLHGNCLIAYARHKYIL-TMVNGEYRYFNGGDLVFADASQIRVDKCVE-----NFVFVS 55 + H ++ + +I V+G + GD++ ++ + + +F + Sbjct: 43 KHWHEELELSLTVNGHIDQFTVDGRPYHTKTGDVLVINSGSVHSVPIQKPGTEAFTLFFN 102 Query: 56 RDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 D L LP E H VS++ + + LR + Sbjct: 103 PDFLRAALPQASEIVFATHP-NDVSAVESTELVDYLYAMHYTVRHDPMNYLRITRLAYD- 160 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 ++ L+ F E I L ++ I +I + T+A +A +S S L Sbjct: 161 -ILDELVMHFSNREFGINPHLIQTVDERLYKILFYIKAHIYNGLTVAAVAEHFDISTSYL 219 Query: 176 KKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + + + + S L R+ +A Q ++ S+ ++ + G+ V F +F+ YG Sbjct: 220 SRYFKIKLQMSPLAYLQAVRLNKAYQYLMNTNKSMSWISDTTGFGDVKSFERLFKKKYGT 279 Query: 235 TPTEYQERSAQ 245 +P Y+++ + Sbjct: 280 SPKSYRQQFRK 290 >UniRef50_UPI0001788C94 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C94 Length = 315 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 86/269 (31%), Gaps = 24/269 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 +H I Y + + G+ G++ + + V + Sbjct: 48 HMHDYLQIWYVSKGEFIHTLYGQKYRMVQGNIFVLPPYSVHRVEMVP-GKELEVLGCEFM 106 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCS----------------RDIPVFQEVAQLSQNKNL 106 + E + ++ L D+ V + + ++ Sbjct: 107 PAFINERLEGMPDEPQLFDLSFIKPFVTTEDRVPLKITLTGGSDLVVKELLTEMLNEFGG 166 Query: 107 R------YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT 160 R + + L + +H + I+++ Sbjct: 167 RGPFFDILLKANLLKLLAIVNREHAEQSKHISVTAGSAPYREPILESVQYIHDHFDQPLW 226 Query: 161 LARIASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219 L + + +MS + ++ +E ++SQ L R++ A++L+ ++ V G++ Sbjct: 227 LEDLCARTMMSRTSFCRRFKEVTGWTFSQYLANYRIRMAMRLLTEPELTVTDVCFKVGFN 286 Query: 220 SVSYFIYVFRNYYGMTPTEYQERSAQRLS 248 + YF +F+ Y G TP Y++ + + + Sbjct: 287 ELPYFCRIFKKYTGTTPAYYKKNAFKTVD 315 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 106/271 (39%), Gaps = 26/271 (9%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H ++Y V + LV + E V + Sbjct: 77 HNHDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYIREKTDIVFNILIKRS 136 Query: 61 ----LFLPMLKEE-------ALNLHAHKKVSSLLVHHCSRDIP------VFQEVAQLSQN 103 +FL M EE +++ + LV HC+ ++ + + Q + Sbjct: 137 LVEKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSLVHGIIREHFDQKLFS 196 Query: 104 KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLAR 163 +N+ A+++ + + L + L+ E +P + + + I NN + TL Sbjct: 197 QNMIIAKLIELFSELSRLFQITLQGESPLPET-----SSNISEILDYIENNYS-SVTLTS 250 Query: 164 IASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222 +A SPS + + ++ S++ ++ +++ A + + +++V GY VS Sbjct: 251 VAEHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQVIEIVGYSDVS 310 Query: 223 YFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253 +F +F+ YG++P +Y+ +S + + R SA Sbjct: 311 HFYKIFKQKYGLSPRQYRTQSNKLGAGRHSA 341 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 91/248 (36%), Gaps = 18/248 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y + + + E F+ +++ ++ + + + L Sbjct: 43 HKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLMQ--LEFL 100 Query: 63 LPMLKEEALNLH-----------AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111 + + H ++ + + + R + Q + K+ Y + Sbjct: 101 PEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSKYYQYL 160 Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + +L DE ++P+ N + + I N + T++ +AS+ + Sbjct: 161 VVMYYAELLILIYRYLDEAYLPICTNDS----LKKAISYIRLNYQSDITISDVASQTGVG 216 Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 L+K + S L + R+ +A++L+ S+K V +CG+ S YF +F+ Sbjct: 217 ERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRIFKQ 276 Query: 231 YYGMTPTE 238 G++P E Sbjct: 277 QMGISPRE 284 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 80/249 (32%), Gaps = 12/249 (4%) Query: 13 ARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALN 72 + + + GD+ + + S + +E + Sbjct: 2 VQEGRGYLEMGEAHYTLEKGDVFLIPEG-VEAWYEADKETPWSYRWIGFEGVSARECLES 60 Query: 73 LHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFI 132 + V + V + Q+ + L Y L++ AL+ + + + D Sbjct: 61 AGFTPQKPVRKVRCLDK---VGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKN 117 Query: 133 -------PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ET 184 P IN N + + +A + ++ S L +E Sbjct: 118 LAGMGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGC 177 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S + L + RM++A L+ + VA GY F +F++ G +P EY+E + Sbjct: 178 SPREYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKS 237 Query: 245 QRLSNRDSA 253 + + + Sbjct: 238 RLVVGKKKG 246 >UniRef50_A4ATE5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATE5_9FLAO Length = 289 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 101/257 (39%), Gaps = 11/257 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 +H + Y R+ + ++ ++ G L+F + D +++ + Sbjct: 33 HIHPEYELVYIRNGKGVLQIDSHEIPYDNGALLFIGPNIPHADFGNKDYEDNLEIVIQFK 92 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA------EMLRKRA 116 + ++ K + L+ ++ + +EV + + ++ Sbjct: 93 NEFVDDKLTIFPEFKNIK-ELIKKTNQALVFNKEVKTKFKGYFENFKVGQDAHNLINLIG 151 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPN---MRTRVCTVINNNIAHEWTLARIASELLMSPS 173 L+ L + + L +P+ + +N + A + I +++ ++ + Sbjct: 152 LLDELGTNSSYETVISKKDLIEHKPSEVIRLETIFEFVNEHYAEPINIVSICTKVGLTKN 211 Query: 174 LLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + ++ S+ Q + E R+++A+ L + F++ V CG++ SYF +F+ + Sbjct: 212 SFCRFFKKMTHQSFVQFVNEFRIRKAIDLFHQNLFTVSEVMYKCGFNDASYFAKIFKKHT 271 Query: 233 GMTPTEYQERSAQRLSN 249 TP+EY E + R+ + Sbjct: 272 NKTPSEYLENKSNRIKS 288 >UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I274_CLOCE Length = 276 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 94/246 (38%), Gaps = 4/246 (1%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 + LH + Y I VNG R GDL + + + + ++ + Sbjct: 23 LPHLHAQLELLYVEDGEIEITVNGCTRLLKKGDLSVSFPNSVHSYNTPPHQERMNCIVVI 82 Query: 61 LFLPMLKEEAL-NLHAHKKVSSLLVHHCSRDIPV-FQEVAQLSQNKNLRYAEMLRKRALI 118 L L + + L H KV + + +D+P + + + +A I Sbjct: 83 LNLILAGDFINTLLKFHPKVPFISSDNLHKDVPYAINTLYEEYNYAQSKPVYTPICKAYI 142 Query: 119 FALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKK 178 ++S L+ I +V ++ + IN N +L ++ L + L + Sbjct: 143 QIIISRLLQQMELI-TNTDVNYFDIIFDIINYINENYMQPISLNDMSRALGVGKHYLSRV 201 Query: 179 LR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237 + + S+S + R+ A +++ +I ++A CG+ S+ F F ++P+ Sbjct: 202 FSDKIKISFSDYINGIRVSWACNMLLNTNKNITQIAYDCGFQSIRTFNRAFHKACHVSPS 261 Query: 238 EYQERS 243 ++++ Sbjct: 262 KFRKSQ 267 >UniRef50_C6VNM4 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNM4_LACPJ Length = 341 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 15/251 (5%) Query: 4 LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFL 63 H + + + V+G + DL+ +A++ + + ++L L Sbjct: 29 WHPQIELLWLLQGTVEVNVDGTRHQLHANDLILINANRGHATFALT------PECIALRL 82 Query: 64 PMLKEEALNLHAHKKVSSLLVH-----HCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118 +L + N + L++ + Q +AQL + + + AL Sbjct: 83 HILPDFYTNQGIDLSSGAFLLNSVTTPQHRDYQTIRQILAQLYLGLHQQDWPIFDLNALY 142 Query: 119 FALLSVFLEDEHFIPLLLNVLQP---NMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 F L ++ D + + QP + RV IN TL A SP+ L Sbjct: 143 FQLTNLLHHDFFDTGITMTYPQPKTQSSLNRVIDYINQAYDRPITLNEAAKISHYSPAYL 202 Query: 176 KKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 + + E ++ + LT CR+Q A+ + + +A++ G+ V F +F+ ++G Sbjct: 203 SRIFKAELGLNFYEYLTRCRLQHAIYDLENPTTRVADLALANGFQEVKSFNLMFKKHFGQ 262 Query: 235 TPTEYQERSAQ 245 TP+ Y++ + Sbjct: 263 TPSSYRQHLSH 273 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 82/252 (32%), Gaps = 15/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + V+ + G+ +F +++ + + N S + Sbjct: 37 HWHEGFEYLTVTKGRAVFKVDDLEIEVSKGEGIFINSNVLHSAHSI-NEEECSFFAVVCH 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC-------------SRDIPVFQEVAQLSQNKNLRYA 109 L + + ++ +L H + + +V +++ K Y Sbjct: 96 PAFLSSYINDCINQRFINPILNHSLYFPIHLKKDVDWQRNILLLLTQVYDINKEKEFGYE 155 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 +L+ + + + + V I+ N ++ ++ AS + Sbjct: 156 LLLKSKIYEIWFECIKNAKKSINKGSNTSYKTERMKVVLNYIHENYFNKIVVSEFASLVH 215 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 MS + + + + R++R+ + I +A G+ +SYF VF Sbjct: 216 MSDEHFCRFFKAMTHFTLVSYVNRYRIERSCVFLSQTNKKISEIAGDVGFGDISYFNKVF 275 Query: 229 RNYYGMTPTEYQ 240 R G TP +Y+ Sbjct: 276 RKIMGCTPVDYR 287 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 9/248 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ N +I + +N GD+ I + + S + Sbjct: 36 TIRDNYVIHFILEGKGKLTINQHTLDLAAGDIFLL-PKDISTFYQADLQMPWSYIWIGFS 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ--NKNLRYAEMLRKRALIFA 120 +A N+ + H R +F ++ + Q N L L ++ Sbjct: 95 ----GSKAENILKQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELYK 150 Query: 121 LLSVFLEDEHFIPLL-LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 LL+ +E+ L N +V +I++ + IA +L +S S L K Sbjct: 151 LLAALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIF 210 Query: 180 -REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 + S + + + RM+R+ L+ SI ++ S G+ F F+NY+G +P++ Sbjct: 211 RKSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSK 270 Query: 239 YQERSAQR 246 +++ Sbjct: 271 FRKEIQNN 278 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 85/245 (34%), Gaps = 6/245 (2%) Query: 6 GNCLIAYARHKYI-LTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 + + + + D+++ C + ++ Sbjct: 39 DFPRLNIILNGQLPDRALGENASPLEANDVLYIPGD---SWNCPQWQAPCLLLSILFDKQ 95 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 L+ + + R V + Q ++ E R+++ +LLS Sbjct: 96 RLECSLQHWNGKAITVVEKRQALRRGPRVGSFLLQALNELRMQPQEQRTARSIVVSLLSH 155 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE- 183 D + + + ++ + A + +A +SP+ L ++ Sbjct: 156 -CHDLLGSQAQTSSRSQALFEAIRQYMDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGP 214 Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243 +++ L R+++A L+ H +K +A +CG+ +YF +FR +P+EY+ + Sbjct: 215 MGFNEYLNHIRLEQARMLLKGHDMKVKDIAHACGFADSNYFCRLFRKTTERSPSEYRRQY 274 Query: 244 AQRLS 248 +L+ Sbjct: 275 HSQLT 279 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 102/253 (40%), Gaps = 10/253 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC---VENFVFVSRDTL 59 H +Y I +N + G +F + + K E+ Sbjct: 48 HWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDK 107 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRD--IPVFQEVAQLSQNK-NLRYAEMLRKRA 116 LF + + S + S + I ++ + Q + ++ + Sbjct: 108 KLFSSFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDICI 167 Query: 117 LIFALLSVFLEDEHF---IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + L++ +++ + + + + ++ + ++ + A + TL +IA + ++ + Sbjct: 168 NLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNKN 227 Query: 174 LLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + + + + + + L E R+ ++++L++ SI ++A+ G+ +VSY+I F Sbjct: 228 ECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNV 287 Query: 233 GMTPTEYQERSAQ 245 G+TP EY++R + Sbjct: 288 GITPNEYRKRELK 300 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV--DKCVENFVFVSRDTLS 60 H + Y H + GD++ + + + E+ VF + Sbjct: 69 HTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPEDIVFNIMISKD 128 Query: 61 LFLPMLK------------EEALNLHAHKKVSSLLVHHCSR--DIPVFQEVAQLSQNKNL 106 LF + H ++ S+L H V + + NK + Sbjct: 129 LFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLDMMIEEFFNKPM 188 Query: 107 RYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 Y + L + + L + + + I N A TL A Sbjct: 189 GYEKALESFLAL--TFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAEA-TLVSTAQ 245 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 + S L + +++ S++++ +++ A +L++ I +A GY +VSYF Sbjct: 246 QFNYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVGYANVSYFF 305 Query: 226 YVFRNYYGMTPTEYQERSA 244 F+ Y TP ++++ ++ Sbjct: 306 KAFKKRYMQTPYQFRKSNS 324 >UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJJ5_9FIRM Length = 398 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 103/257 (40%), Gaps = 18/257 (7%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 +Q H + + Y + ++ DL+ + + D V+N S T+ Sbjct: 154 VQPAHKSYELIYVYEGSLDITLSSGTNTLQPHDLIIYRSDK--ADLSVQNG--CSYLTVV 209 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRAL--I 118 + + + H HC+ ++ + ++ Y L L + Sbjct: 210 FEVNHRRSLHILNHT---------FHCTSEMQQILWKLLIESEEHSYYTHTLMVCYLQEV 260 Query: 119 FALLSVFLEDEHFIPLLLNVL--QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L+ F E + LL + Q ++ + + +N + T+ I E +S S L+ Sbjct: 261 LLLIMQFYETMNHKTLLTDSKSAQNDLLSEILAYMNKRLTEPLTIEDICHEFFISRSSLQ 320 Query: 177 KKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + TS L ++Q++ +LI + ++I +A G+ S+ YF +F+ Y+ T Sbjct: 321 ALFKTHLNTSPKNYLLNIKLQKSKELIRENQYTISEIAYRLGFSSIHYFSRLFKKYFNTT 380 Query: 236 PTEYQERSAQRLSNRDS 252 P++Y ++A+ + ++ Sbjct: 381 PSDYARKAAENQNRQNK 397 >UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK6_BACP2 Length = 352 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 16/259 (6%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFV------ 54 + ++H + Y + V + GD+ F + + +EN + + Sbjct: 94 LSAIHDFFEMIYVLENEMYVEVEDKKMALKSGDIAFIPPNTLHKPIVMENTIAIQIMIRK 153 Query: 55 SRDTLSLFLPM-----LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA 109 S F + + E LN K+ ++L+ H D + QL R+ Sbjct: 154 STFQKVFFKMLKGNHVISEFFLNALYIKENKNILIFHSHLDKNLVDCSLQLFTENYNRFP 213 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNM---RTRVCTVINNNIAHEWTLARIAS 166 +F +L L + +N ++ ++ I T+ +A Sbjct: 214 GYQLIMNNLFEILLCLLLRFKPSHMNVNQVKQYRDIRMIQMLQYIQQ-CCEHITIQEMAE 272 Query: 167 ELLMSPSLLKKKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 E +SPS L K + R+ S+ ++ E R+++A ++I I +A + GY +V +FI Sbjct: 273 EFNLSPSYLSKYIARKLGKSFREIRQEIRLEKACEMITSSNLQINDIATAVGYQNVEHFI 332 Query: 226 YVFRNYYGMTPTEYQERSA 244 +F+ Y +TP +Y+ + Sbjct: 333 RLFKKKYHLTPHQYRLNNR 351 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 91/260 (35%), Gaps = 19/260 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL--- 59 H Y ++V+ E ++ + +Q+ + V + Sbjct: 71 HKHIFFEFVYVYSGQFHSVVDSESLVLGQDQVILLNPNQVHAPYIERDSDLVLNILIKQP 130 Query: 60 ----------SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP--VFQEVAQLSQNKNLR 107 S + ++ S+ L+ + + + V + + + L Sbjct: 131 LIDRTFASLISRDNILFDFFYNYIYGISGASNYLMVDRTPRVDQIISSIVEEYCERRPLF 190 Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167 ++ +F L+ + + I N A TL+ A Sbjct: 191 EQSLIGWIINLFTELARVYSERKTNQPARPAK--PGMAEIIGFIRENYA-TVTLSETAKT 247 Query: 168 LLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226 SPS L +++ ++ +++ + R++ A + ++++++ G+ Y Sbjct: 248 FSYSPSYLSYLIKKETGQTFKEIVRDFRIESACNFLKNTQLTLEQISEILGFQDSFYIAK 307 Query: 227 VFRNYYGMTPTEYQERSAQR 246 VF+ YG++P+EY++RS Q+ Sbjct: 308 VFKQRYGISPSEYRKRSRQQ 327 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 1/124 (0%) Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 L ++ I ++ + + + N + E +L ++ E+ +SP K + Sbjct: 406 FLEKMMQTCCSIRDKNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFK 465 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 EE ++++ LT R+ +A +L+ SIK + V GY +YF +F+ + G+TP EY Sbjct: 466 EESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREY 525 Query: 240 QERS 243 +ER Sbjct: 526 RERY 529 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 87/241 (36%), Gaps = 5/241 (2%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + L+ Y +++G+ GD++ + + + + Sbjct: 56 HDDNLLIYCLDGEGEAVIDGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIY-WVHFHGH 114 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA--EMLRKRALIFALL 122 ++ A +L + V + + L + + Y + + +L Sbjct: 115 HAEDFAQHLQQRESNQRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQIL 174 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE- 181 S + + + RV +++ +I + L +A + +S KK +E Sbjct: 175 SHIALLQPLAKQKQSRGGLD-IERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEV 233 Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 T+ + +++RA L+ I VA + GY YF +F+ G++P++Y++ Sbjct: 234 TGTTPINHFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293 Query: 242 R 242 Sbjct: 294 M 294 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 87/248 (35%), Gaps = 10/248 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H Y + + + + G+ +F ++ + + + + F Sbjct: 47 HWHREFEFLYVESGEVTCGIGEKQIILSEGEAIFINSKILHRFYAPSGGIIPNFVCMPEF 106 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIP-----VFQEVAQLSQNKNLRYAEMLRKRAL 117 + + +SS + + + Q + ++ + + L AL Sbjct: 107 IAPENSLIYKKYILPIISSNIYFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLAL 166 Query: 118 IFALLSVFLEDEHFIP----LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 + L F E+ ++ + + I+ N H +L IAS + +S S Sbjct: 167 MQDLWLTFYENVKLSDKGDVQTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKS 226 Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 T+ L R+Q A L+ +K +A G+H+V YF +F+ Y Sbjct: 227 TALNLFHRFLHTTPVNYLIGYRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRY 286 Query: 233 GMTPTEYQ 240 +TP+EY+ Sbjct: 287 HLTPSEYR 294 >UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D174_PAESJ Length = 281 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 79/240 (32%), Gaps = 8/240 (3%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPML 66 + + G + + R ++ Sbjct: 47 YYNLHIVLGGKGYLHTDNMTYELTQGQGFLYGPGLRQTYHSDARDPWSIR-----WVHFY 101 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN-KNLRYAEMLRKRALIFALLSVF 125 K + + H PV + +L + ++ + + ++ LL+ Sbjct: 102 GARPEEFLDGKGLDEPWLFHLPDLAPVEALMERLLELGRSYEVDDEYAAASTLYELLTRI 161 Query: 126 LEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ET 184 + + ++ + N +TL + A+ S +K + Sbjct: 162 QTTASQLNVSVHQTADK-IRAAANYVRANCNQPFTLEQAAAIAGYSSHYFSRKFNQTFGK 220 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244 S+S LTE R+ RA QL+ S+K +A+ G+ SYF FR+ GMTP +++ER Sbjct: 221 SFSDFLTEARILRAKQLLASTRLSVKLIALETGFSQTSYFSKCFRDQEGMTPLQFRERHQ 280 >UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1V9_PAESJ Length = 279 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 12/251 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVF-VSRDTLSL 61 H + Y L +++G+ L+ Q+ + R L Sbjct: 25 HAHSQMELTYVHEGRGLLIIDGKSYSIEPNTLLVFPPFQMHRIQIQVTEAEPFIRSVLLF 84 Query: 62 FLPMLKEEALNLHAHK---------KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112 +L + + K + + V+ + P + Q S + Sbjct: 85 EPAVLHGYLNDFPSLKSFFQRLMLQQANVHPVNAMPENEPFVALLRQFSITMGGKREADF 144 Query: 113 RKRALIFAL-LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171 + +F L L L+ + I + + L +A EL +S Sbjct: 145 EENMGVFLLSLVHQLKQSPDGESAYLKKHNLHVEEIIGWIEKHYMDPFRLEDLAGELHLS 204 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 P + +E T+ R++ A L+ + + G + SYF +FR Sbjct: 205 PYHVAHLFKESTGTTIVAYTQATRIRHACSLLRKTTLPLSEIGYRVGIANPSYFSKIFRQ 264 Query: 231 YYGMTPTEYQE 241 G+ P Y++ Sbjct: 265 IMGVAPLTYRQ 275 >UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV Length = 282 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 80/245 (32%), Gaps = 6/245 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 ++ +I V + G Q V + S + L Sbjct: 37 AVRDVYVIHIVLEGRGTYSVGNQRYDLQEGQGFVVPPGQ-SVFYQADREEPWSYVWMGLG 95 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 +L +L S + + V + + L + ++ L Sbjct: 96 GRLLPRYLQDLGLQSGQWSFELTSLQEFKAL---VFESLAYEGSGITAELALQRQVYRFL 152 Query: 123 SVFLEDEHFIPLLLNVLQ-PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181 + + L+ + +V ++++++ ++ +A +L + PS L + ++ Sbjct: 153 ELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQKLALHPSYLSRLFKD 212 Query: 182 E-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240 E + + R+ A L+ S++ +A G+ F F+ G +P ++ Sbjct: 213 EVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFSKAFKKARGQSPLNFR 272 Query: 241 ERSAQ 245 + S+ Sbjct: 273 KASSH 277 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 80/245 (32%), Gaps = 2/245 (0%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y ++ + D V + + + Sbjct: 37 HTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPLEYIVVGIQG 96 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 L ++ H L + + Q + N+ L Y +++ L L+ Sbjct: 97 LSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSY-DLVCHNLLEILLI 155 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 + + + + + + L +AS +S + ++E Sbjct: 156 KILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFYISHSFKKE 215 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 S + L R++ + L+ +SI +VA G+ + +YF FR G++PT+Y+E Sbjct: 216 VGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITGISPTDYRE 275 Query: 242 RSAQR 246 + + Sbjct: 276 KYQKE 280 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 90/234 (38%), Gaps = 6/234 (2%) Query: 10 IAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEE 69 + + + E Y G LV A R V + + + + Sbjct: 46 LYFILDGEGWVKIGDEELYPVPGQLVLMPART-RQSYSVISGRPYLKYWSHFSATVGDSD 104 Query: 70 ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129 + + + +FQ++ +++ A LR+++++ +LS E + Sbjct: 105 VFSWLNVP--HCYDLSGNAEMPALFQQLVD--AHRSDTLAARLREKSVMLDILSRVFEHQ 160 Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188 + +V I N++ E TL ++A L + P+ K + + + Sbjct: 161 QPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQK 220 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 L+ RM++A ++ SIK +A + G+ S +YF FR G +P+EY+ Sbjct: 221 YLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSPSEYRNN 274 >UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Kordia algicida OT-1 RepID=A9E4Z4_9FLAO Length = 288 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 9/250 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSR-DTLSL 61 H ++Y ++ R F D++ ++ V K S +L Sbjct: 31 HQHEEIQLSYIVSGKGTFIIGDTIRDFQPNDVLLFGSNVPHVLKSDVTTDEDSYMISLFF 90 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 E L +++ LL S + + + L++ A F + Sbjct: 91 THDSFGEHFFMLPKLQQLQKLLNDARFGVKFTKHSTIVKSLFEGVLHQNSLQQFATFFEI 150 Query: 122 LSVFLEDEHFIPLLLNVLQP------NMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 LSV ++ + + V + N+ + L IA+ M+P+ Sbjct: 151 LSVLTPSDYETVSSFINTKNYTDDEGKRMSAVFEFVMNHFDQKIILEDIATVANMTPNAF 210 Query: 176 KKKLRE-EETSYSQLLTECRMQRALQLIVIHG-FSIKRVAVSCGYHSVSYFIYVFRNYYG 233 K ++ ++ + LTE R++ A + + SI +A SCG+ +VS F F+ G Sbjct: 211 CKYFKQRTNKTFFRFLTEVRIENACKFLTNSSQLSIAEIAYSCGFFNVSNFNRKFKEIKG 270 Query: 234 MTPTEYQERS 243 +TPT++++ Sbjct: 271 LTPTKFRKSY 280 >UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B1BZ28_9FIRM Length = 432 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 99/243 (40%), Gaps = 14/243 (5%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + Y H + T V G N DL+ +Q + +N S T+ + Sbjct: 196 HKHYELTYVDHGSLDTTVEGTTYTLNSYDLMLYGPNQFHTQQITKN-KSCSYLTVIFNMD 254 Query: 65 MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124 ++ ++A + + + H + +F + + S N ++ +L Sbjct: 255 IIDDDA--------ILNRIFHCDNELHNIFNKFVKASSNSLPYSKTLMLCYLQEIIILLT 306 Query: 125 FL----EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 E +H + Q + + +N+ I T+ I + +S S L+ R Sbjct: 307 QYDSSGETKHISTGPMQHFQDGLLQEILDYMNSMITEPLTIEEICHKFSISRSSLQTLFR 366 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 E S + + +++++ +LI + ++I +A G+ S+ YF F+ ++ +TP+EY Sbjct: 367 NNLEISPKNYMVQIKLKKSKELIRENKYTISEIAFMLGFSSIHYFSRTFKQHFNLTPSEY 426 Query: 240 QER 242 ++ Sbjct: 427 AKK 429 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 95/257 (36%), Gaps = 16/257 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I + +G+ + +++ + ++ E+ R Sbjct: 54 HWHNAIEIILPVENHYDVEASGQAYHILPSEILIIPSGEMHALYAPESGK---RFIFLFD 110 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY--AEMLRKRALIFA 120 + + + ++S L + ++ +V QL Y + R+ A+ Sbjct: 111 VSSIAQMKGYTSIQSLMTSCLHITKTTYPQIYNDVYQLLVQMRNEYFSSNEFRELAIYSH 170 Query: 121 LLSVFLE-------DEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLM 170 L+++F+ + P + Q + V I+++ E TL IA Sbjct: 171 LINLFVSIGRNRINNVDLFPNTRSHKQKEYLQKFNEVLDYIDSHYTEELTLDNIADFSGF 230 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S + ++ ++++ L R++ A +L+ SI +A+ G+ S+S F +F+ Sbjct: 231 SKYHFTRLFKQYTDSTFYDYLIYRRIKAAEELLANPELSITEIALQSGFSSISTFNRIFK 290 Query: 230 NYYGMTPTEYQERSAQR 246 G TP+EY+ + Sbjct: 291 QKKGCTPSEYRSLYSMN 307 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 95/249 (38%), Gaps = 9/249 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I+ ++ + GE GD++ + D E + ++ + Sbjct: 30 HHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYD-ITEPGMTNAQLHIGFR 88 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR------KRA 116 L+ + N KK S + + +++ + + Y +L+ Sbjct: 89 NFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLILKAFVMQLIIH 148 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 ++ LE+ + + + + + + +L+ ++ + +SP+ + Sbjct: 149 VLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYIS 208 Query: 177 KKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 K +E S L + R+ RA +L+ ++K+ A GY+ YF +F+ YYG Sbjct: 209 KVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYYGFP 268 Query: 236 PTE-YQERS 243 P+E +++ S Sbjct: 269 PSENWRKSS 277 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 89/267 (33%), Gaps = 26/267 (9%) Query: 5 HGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLP 64 H + + +VN E + GD+ + K NF ++ + Sbjct: 34 HDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSHGYKDPHNFKIIN---IMYKPE 90 Query: 65 MLKEEALNLHAHKKVSSLL-------------------VHHCSRDIPVFQEVAQLSQNKN 105 L E ++ +L + + + + + K+ Sbjct: 91 RLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEEYKRKD 150 Query: 106 LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 Y M+ R F + V+L ++ I L + + +N + L ++A Sbjct: 151 QGYQTMIYAR---FMEMVVYLSRQYIIENKLLHDTFVHLAKAILFLEDNYLNPIKLEKLA 207 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 E MS + +E T+ + R+ A L+ I +A+ G+ +YF Sbjct: 208 DEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGFSDSNYF 267 Query: 225 IYVFRNYYGMTPTEYQERSAQRLSNRD 251 F+ G+TP EY+ R SN D Sbjct: 268 SRQFKKITGITPKEYRARYKLIYSNID 294 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 94/254 (37%), Gaps = 14/254 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSR------ 56 LH + Y + + GDL + I + VS Sbjct: 33 HLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHSSFPDPDQPIVSSALFFAP 92 Query: 57 -DTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 L L+ L+ + + + H + E ++ +R A++ + Sbjct: 93 SLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIEDMLKGISEEIRLAQLGFRE 152 Query: 116 ALIFALLSVFLEDEHFIPLLL------NVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 AL+ L S+ L +I L + + P I+ ++ LA ++++ Sbjct: 153 ALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQWIHEHLDQPIGLAALSAQAA 212 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 + P+ + ++ + + R+ RA +L+ H S+ ++A CGY ++++F F Sbjct: 213 VDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVGQIAEICGYATLTHFHRNF 272 Query: 229 RNYYGMTPTEYQER 242 + GMTP Y+ + Sbjct: 273 KKLTGMTPGAYRRQ 286 >UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Oceanospirillales RepID=A6VU91_MARMS Length = 298 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 89/252 (35%), Gaps = 11/252 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVS-RDTLSL 61 H + + + V ++ G L+ C ++ V RD + Sbjct: 36 HAHDDYELHFIVATSGKVFVGDYIGNYSPGQLILTGPRLPHNWICQKDQEEVQLRDMVIR 95 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN--KNLRYAEMLRKRALIF 119 F + + ++ I + + + ++ + +R + L + L Sbjct: 96 FDHESFSNGMKIIPELAEILPMLARAKSGIEFYDQDHEYLKDVFQKVRDSTGLSRLILAL 155 Query: 120 ALLSVFLEDEHF-------IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172 LL + + I L + V ++ N + + TL+ +AS + MS Sbjct: 156 PLLQKLAQSRSYRLLSTVQIDLKSSETLQRKINTVVDYVSQNYSQDITLSSVASLIGMSD 215 Query: 173 SLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231 S + ++ + + + R+ RA L+ I + G+++V+ F F Sbjct: 216 SHFSRFFKKATGNRFIEFVNRVRVSRACSLLTETDQQIATICFQVGFNNVANFNRRFHEL 275 Query: 232 YGMTPTEYQERS 243 G+TP +++ +S Sbjct: 276 KGVTPRDFRTQS 287 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 7/238 (2%) Query: 8 CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLK 67 LI Y +NG G I K + + + + + Sbjct: 43 FLIHYIFSGKGSFEINGYTYNLESGQGFLISPGDIATYKADDKDPWT-YAWVEFNGRLSE 101 Query: 68 EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLE 127 + + K FQ + + L + ++ L++ E Sbjct: 102 KFLHQIGLSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNN---LLILSSLYHFLAMIHE 158 Query: 128 DEHFIPLLLN--VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ET 184 N L+ + I N ++ +A L ++ + + +E Sbjct: 159 ASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFKESVGI 218 Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + L RM +A +L+ +I ++ GY+ F +F+ +G+ P Y+ Sbjct: 219 TPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPPKNYRNS 276 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 87/260 (33%), Gaps = 19/260 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H + Y L + DL+ + I ++N V +S Sbjct: 68 HCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTIKNEDSVFNILISKT 127 Query: 61 --------------LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNL 106 +F + + + + + + K L Sbjct: 128 LFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLDLVESIIIEYLEKEL 187 Query: 107 RYAEMLRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 Y +++ L+FA LS +L N + IN N A +L I+ Sbjct: 188 SYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYINEN-APNVSLESIS 246 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 S L + + + YSQ++ + +++RA + +I + G+HS +YF Sbjct: 247 ERFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPEIMELSGFHSANYF 306 Query: 225 IYVFRNYYGMTPTEYQERSA 244 +F+ +Y MTP EY+ A Sbjct: 307 YRMFKKFYLMTPNEYRSNYA 326 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 86/243 (35%), Gaps = 4/243 (1%) Query: 6 GNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPM 65 L+ + + M G+ GD + ++ + + + ++ Sbjct: 42 DYYLMHHVISGKGIFMYRGKELELKAGDTFLIEPEELVRYEADQVNPW-MYRWVAFQGKG 100 Query: 66 LKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLR-YAEMLRKRALIFALLSV 124 + E + +F + + Q+K + + L ++F L Sbjct: 101 VPEALEKTGFSSSRCIVHTRDNQNVSELFSTILSVLQDKKEGAHQKALGYLYVLFGELCE 160 Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EE 183 + + I + + + ++ A + ++ +A L + + L + ++ Sbjct: 161 AIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGYNRAYLSRIFKQETG 220 Query: 184 TSYSQLLTECRMQRALQLIVIH-GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242 + L + R+ +A L+ +I+++A S G+H YF F+ +Y PTEY++ Sbjct: 221 LTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRDS 280 Query: 243 SAQ 245 Sbjct: 281 IKH 283 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 87/252 (34%), Gaps = 14/252 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I Y GD++ + +++ + +F L Sbjct: 36 HWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLSQSDHLF--YYALIAD 93 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHC--------SRDIPVFQEVAQLSQNKNLRYAEMLRK 114 +L+ +L+ K ++ + + + + + + + + Y ++ Sbjct: 94 FSLLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKELERQEFGYELAIKS 153 Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTLARIASELLMS 171 L + + V + R + I + + ++ +++ +S Sbjct: 154 ELYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLS 213 Query: 172 PSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230 + +E + ++ + E R+ RA L+ ++ +A + G++ + YF F+ Sbjct: 214 RFHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKK 273 Query: 231 YYGMTPTEYQER 242 Y M P+ +++ Sbjct: 274 YKRMAPSALRKK 285 >UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM Length = 304 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 104/269 (38%), Gaps = 24/269 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD----------------- 45 H + YA + +NG Y F GD V ++ ++ Sbjct: 35 HFHYYIEMLYALSGHFRIYLNGIYHEFAAGDFVLINSREVHQIDALSSEGGSYIVVRFLP 94 Query: 46 KCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKN 105 + + + + S L LP + E +++ SS+L S + E+ + S+ K Sbjct: 95 ELIYDGMTQSHFELKYLLPFITEN--SIYEKVISSSILNAKHSAIPGLMNEIIRESEEKQ 152 Query: 106 LRYAEMLRK-RALIFALLSVFLEDEHFIPLLLNVLQPNMRTR---VCTVINNNIAHEWTL 161 Y ++ IF L + PLL + ++ + T + N + Sbjct: 153 YGYELAIKNHIGGIFLWLLRYWHANGEEPLLEDFENQQLKQQLSPALTYMITNYEKSISA 212 Query: 162 ARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220 A +A +S S + ++S L E R++ A +L+V ++ +A + G+ + Sbjct: 213 AEMAKLCNLSYSYFSRSFNRLLHMNFSDYLNEIRIREAEKLLVSTTQNVTEIASAVGFCT 272 Query: 221 VSYFIYVFRNYYGMTPTEYQERSAQRLSN 249 SYFI F Y ++P +YQ++ Q + Sbjct: 273 TSYFIKQFTKYLHVSPKQYQKQMRQGQKD 301 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 81/245 (33%), Gaps = 5/245 (2%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + +H I + G D+ + + K + + T+ + Sbjct: 34 RHVHDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKH--TYFTICV 91 Query: 62 FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFAL 121 LK A + + + ++D + + + + M ++ +LI L Sbjct: 92 EPEALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISIL 151 Query: 122 LSVFLEDEHFIPLLLN-VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180 + L P + R I + A TL +A +SP ++ Sbjct: 152 STAILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLFL 211 Query: 181 EE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239 E S L + R+++A +++ S+ A+ G+ S+F F+ G++P Y Sbjct: 212 ENVGISPHDFLIQYRIKKAREMLDQGS-SLADAALDVGFTDQSHFTRAFKRVTGISPGRY 270 Query: 240 QERSA 244 Sbjct: 271 IRNLQ 275 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 92/257 (35%), Gaps = 18/257 (7%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I + + ++ E + GD++F A + V + +S + Sbjct: 40 HWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSL-CEGDLSYLAIVYN 98 Query: 63 LPMLKEEALNLHAHKKVSSLL-------------VHHCSRDIPVFQEVAQLSQNKNLRYA 109 + + + K V L C+ + ++ + K Y Sbjct: 99 SSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQ 158 Query: 110 EMLRKR-ALIFALLSV--FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 M++ + ++ LLS V + I N A + T+A A Sbjct: 159 LMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAAR 218 Query: 167 ELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFI 225 + ++ K ++ ++ + CR+ A +L++ SI +A G + +YF Sbjct: 219 RMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFT 278 Query: 226 YVFRNYYGMTPTEYQER 242 +++ Y G+ P++ +++ Sbjct: 279 KMYKKYKGVAPSQLRKQ 295 >UniRef50_C0ECP0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP0_9CLOT Length = 355 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 94/263 (35%), Gaps = 16/263 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDT---- 58 H Y + + + ++ + + + ++ + Sbjct: 93 HRHDFFEFNYVYRGKVSNCLENKPIVQTNRQILLMNPYAVHNPQPIDEDTVLFNLLVDRS 152 Query: 59 ---------LSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDI-PVFQEVAQLSQNKNLRY 108 LS +++ +++ L+ + ++ +F ++ + Y Sbjct: 153 WAENVFASLLSFDHGFFNFFLDSIYGLNRMAPYLILDNTPELTRIFHQMIAEYFEEKACY 212 Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168 ++L + + + +D+ L LQ + I N E +LA+ A Sbjct: 213 QQILFSKLIELFAILSRQQDDSRRKKDLEFLQQRDVADILNYIKVNY-REISLAKAAEFF 271 Query: 169 LMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYV 227 +P+ L K ++ +S +L E +++ A + SI+++ GY SYF V Sbjct: 272 NYTPNYLSKIIKRHTGRYFSDILQEYKLESACNYLTHSSLSIEKINEIIGYSDASYFSKV 331 Query: 228 FRNYYGMTPTEYQERSAQRLSNR 250 F YG++P +Y+++ ++ Sbjct: 332 FSKRYGLSPNQYRQQHTNLYESK 354 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 87/254 (34%), Gaps = 17/254 (6%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + ++ GD++F + + F S + Sbjct: 41 HWHDEAELTLITKGSCTYQIDLLEYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYV-FH 99 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPV-------------FQEVAQLSQNKNLRYA 109 + L ++ + + ++ L+ H + + F + L + Y Sbjct: 100 INFLGGNNTDICSSRYLTPLINHEFAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYE 159 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 L+ L L + +++ + + V I+ + A +A +A Sbjct: 160 LALKAFLLQAIFLLLQYSEKNADFGVNTS--SDKLKNVLDYIDVHYAESIQVAELAGLCY 217 Query: 170 MSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 S + ++ + Q + R++++++ SI V++S G+H++SYF F Sbjct: 218 FSEYHFMRFFKKHMNMTCVQYINNVRLEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAF 277 Query: 229 RNYYGMTPTEYQER 242 + Y MTP + + Sbjct: 278 KKRYHMTPLSFIKS 291 >UniRef50_UPI0001C35856 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35856 Length = 290 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 11/255 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H I Y L ++G G L+ ++ + R + Sbjct: 38 HWHEELEIVYTLQGNSLHYIDGTCIRSQPGRLIVVNSESSHNIIPDRSVYGNGRKVVIAL 97 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQN----KNLRYAEMLRKRALI 118 + + E L + ++ PV +E+ + L E + ++ L+ Sbjct: 98 I--ISREFLEEVFPDFRNMYFLNEKEVTTPVIRELMVTLSHFGDGTELSRYEKIYRKGLV 155 Query: 119 FALLSVFLED----EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174 LL ++ ++ I L N V I N+ + + A IA + S Sbjct: 156 LQLLYHITQEGVAEKNVILPLNNQKNIERLKGVLQFIENHYMEKISQAEIAEKFYFSREY 215 Query: 175 LKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233 + L++ ++++ LT+ R+Q+A ++ I +A++ G+ I FR YG Sbjct: 216 FARFLKKHTGMTFTEYLTKYRLQKARMQLMASDSGILEIALNNGFSDDRRLILAFRQEYG 275 Query: 234 MTPTEYQERSAQRLS 248 TP +Y++ + Sbjct: 276 TTPFQYRKMERNKEK 290 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 81/245 (33%), Gaps = 8/245 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H ++Y +NG + G L + VE+ + + Sbjct: 36 HWHEFYELSYVVGGEGEHRLNGSAYPLSSGTLFLLTPADFHELVSVEDKPLEIYNVI-FT 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYA-EMLRKRALIFAL 121 M+ + + K+ + +F + ++ + + RA + L Sbjct: 95 EAMMDDNLYHWLFGGKLVLHAQLEEMQHRQIFADYERMREETGASREGSEIAIRATLQRL 154 Query: 122 LSVFLEDEHFI-----PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176 L N R I+++ + L A++ S + Sbjct: 155 LVDLNRGSTANCALPTNGTGNRQLNVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFS 214 Query: 177 KKL-REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235 + + S+ + L RMQ A L+ + + + + G++++ +F VFR GM+ Sbjct: 215 ECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMS 274 Query: 236 PTEYQ 240 P +Y+ Sbjct: 275 PRQYR 279 >UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG3_9CLOT Length = 343 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 99/275 (36%), Gaps = 26/275 (9%) Query: 9 LIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCV--ENFVFVSRDTLSLFLPML 66 + Y + + D++ + + I E+ +F + SLF + Sbjct: 72 ELIYMYRGGSIQFFQDKELELKQHDILILNPNTIHAPYTTQEEDCLFNILISKSLFEQSM 131 Query: 67 KEEALNLHAHKKVSSLLVHH-----------------CSRDIPVFQEVAQLSQNKNLRYA 109 + H + ++H + + +++ NK Y Sbjct: 132 MSLLYDNHMFTGFIADCLYHVSTAVEYLYFPSGNNGMSDENSFLIEKLIAEYINKKEGYK 191 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 ++ ++ L + + + + INNNI + +L ++ + Sbjct: 192 NSMKAWLVLLFLNLSRTHSQLHPLKQGEFDNRGVIAEIISYINNNI-EDVSLKGLSEQFN 250 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 SP L + +++ S+ +++ +M++A + I V G+ S++YF VF Sbjct: 251 YSPEYLSRIIKQNTGQSFIEIVKRFKMEKAKYYLETSDLPISAVMNLSGFKSINYFYKVF 310 Query: 229 RNYYGMTPTEYQE--RSAQRLSNRDSAASIVAQGN 261 + Y G++P+ Y++ R A S R V GN Sbjct: 311 KRYNGISPSAYRKGARHANPPSERTE---FVRNGN 342 >UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36471 Length = 287 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 83/236 (35%), Gaps = 9/236 (3%) Query: 7 NCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPML 66 + LI + + + + D+ + E + ++ + Sbjct: 43 HYLIHFIIKGKGVFFADDKKYILKQRDMFLIRPGETTFYYADEVDPWE-----YAWVAFV 97 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFL 126 +A + + V + + + + + + ++ + Sbjct: 98 GSDAAQITESCGFAYSPVATYPDSPELIESIDDIIHHMQTGDENDYYLLSRLYNIFYYLS 157 Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETS 185 + N + + R +I ++ + T+ +A ++ + + L + +EE Sbjct: 158 ---KPVINTQNTYKNEIVRRTVNLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVGIC 214 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + LT+ R++ A ++ SIK ++ +CG+ S F F+ Y G TP ++++ Sbjct: 215 PKEYLTQYRIRMATVMLSTTNQSIKEISYACGFTDTSLFSICFKKYLGFTPQQFRK 270 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 87/256 (33%), Gaps = 15/256 (5%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + I Y + +N + GD++ +I + F +R + Sbjct: 30 HWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKK--FSNRAVIQFR 87 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDI---------PVFQEVAQLSQNKNLRYAEMLR 113 + K + + + E+ Y +++ Sbjct: 88 TSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEYSKAEEGYKLIIK 147 Query: 114 KRAL-IFALLSVFLEDEHFIPLLLNVLQPNM--RTRVCTVINNNIAHEWTLARIASELLM 170 R + +L ++ + + L+ + + V ++ N L I+ + Sbjct: 148 ARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERIDLDDISKSIGF 207 Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229 S K +E ++ L R+++A I+ +I +A +CG++S+ F +F+ Sbjct: 208 SKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGFNSIKTFNRLFK 267 Query: 230 NYYGMTPTEYQERSAQ 245 N G TP +Y+ + Sbjct: 268 NIVGCTPMKYRRDNKN 283 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 91/248 (36%), Gaps = 12/248 (4%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + + N E GDLV ++ +N Sbjct: 37 HTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQNHPLEYYVLGIDG 96 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ--LSQNKNLRYAEMLRKRALIFA 120 + L ++ V P E+ + L + + +Y + L+ Sbjct: 97 ISFLSQKDRECAQ--------VFCNFEHDPSIHELFRQMLYEIRTAQYGSQTICQHLLEI 148 Query: 121 LLSVFLEDEHFIPLLLNVLQ-PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 L+ + + IP+ +N ++ ++ +++N A TL + M+ + Sbjct: 149 LILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSF 208 Query: 180 REE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 + S Q L + R++RA L+ +SI +A S G+ S SYF +FR + MTP + Sbjct: 209 TKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVK 268 Query: 239 YQERSAQR 246 Y++ A+ Sbjct: 269 YRQEHAKN 276 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 22/261 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H Y ++ N GD++F + + + K N ++ Sbjct: 44 HWHPEVEFTYILSGSMIYQANNTQHLVKAGDVIFVNQNCLHSGKA-SNDCSCRYFAITFN 102 Query: 63 LPMLKEEALNLHAHKKVSSLL-------------VHHCSRDIPVFQEVAQLSQNKNLRYA 109 ++ ++ +K + ++ + + + + +L + K Y Sbjct: 103 PTLISGYKSSIFENKYIGEIINSDRIPFVYFEGSKKENEQIVSLLMRLEELYREKAEGYE 162 Query: 110 EMLRKRALIFALLSVFLED---EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIAS 166 L + +F L D + L+ I++N TL I+ Sbjct: 163 --LLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIKAALDYIHDNYKENLTLDDISE 220 Query: 167 ELLMSPSLLKKKLRE--EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 +S S + ++ T + L R+QR++ ++ G +I A+S G+ S SY+ Sbjct: 221 ACNLSKSSCCRLFKKIVHGTPF-NYLLSYRIQRSIPYLLSEGMNITEAALSVGFSSSSYY 279 Query: 225 IYVFRNYYGMTPTEYQERSAQ 245 +F+ Y TPTEY+ A+ Sbjct: 280 SEIFKKYMKCTPTEYKNNVAR 300 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 9/233 (3%) Query: 10 IAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEE 69 + +G+ G +V A +R+ K V + +P + Sbjct: 45 LVIPFSGSACFTFDGKPYVIEPGMVVHAGPG-MRLSKEVIGDREWEYAVIHYHIP---QH 100 Query: 70 ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129 + + L H S +P V Q+ +++ A + ++F LS+ E Sbjct: 101 ERDEYPLFHKDFSLAHGRSAKVP--HLVRQILDIQSIPGAAAKFQTKVLF--LSLLQEIF 156 Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETSYSQ 188 + I N A E T+ ++A E + + S Sbjct: 157 TAACGQPGQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIH 216 Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 L ECR+ +A +L+ G S+K+VA GY YF F+ Y G++P+EY+E Sbjct: 217 YLIECRISKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYRE 269 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 9/242 (3%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 LH I + + NG+ D++ A + I + E L + Sbjct: 25 HLHKEIEILICQKGVVEATCNGQTLLLEESDIMIALPNTIHSYETKE----YCEYILCIL 80 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 P + + L ++ I F + + M+ ++IF+L+ Sbjct: 81 SPSTLPLFKPYFQKEFTTPFLQMDQTKKITPFVRMLLEEWENDRNQELMISYLSVIFSLI 140 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 ++ + ++ + +++L +AS L +PS + + E Sbjct: 141 L----KNTTFTEKATSTYEDILPSILLYVDEHYLEQFSLEDLASHLGFNPSYVSRLFSER 196 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 + + + E R+ A L+ SI +A CG+ + F VF TP EY++ Sbjct: 197 VHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQRSFNRVFLQLVNTTPREYRK 256 Query: 242 RS 243 Sbjct: 257 TY 258 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 90/272 (33%), Gaps = 29/272 (10%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y VN E + F + ++ +N + + Sbjct: 39 HWHEEVELLYFSGGEFCLEVNMERFNISEECFYFINPGELHSISVEKNGG-CVENAVVFH 97 Query: 63 LPML------KEEALNLHAHKKVSSLLVHHCSR-DIPVFQEVAQLSQNKNL--------- 106 + ML + NL + S+ C R + P F+ V + + Sbjct: 98 MDMLNSAYALDQIQTNLIQPVQNGSIQFPRCLRKNEPAFEPVRKSYEEIRNVFGGDSFRE 157 Query: 107 ----------RYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQP-NMRTRVCTVINNNI 155 L ++ + +L+V + F N T I N Sbjct: 158 NYYDGEAVTDDITRQLFIKSALLRILAVLSANNLFEVTEKNHDHRIETIKTTLTYIQENY 217 Query: 156 AHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAV 214 + + +A + M+ + ++ S + + E R++RA+ + ++ + + Sbjct: 218 KEKIYIRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTEICL 277 Query: 215 SCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246 CGY+++ F+ FR Y TP +Y+ S + Sbjct: 278 ECGYNNLGNFLREFRKYTSTTPLQYRRHSLKE 309 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 88/258 (34%), Gaps = 14/258 (5%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + H + Y + + G LVF + QI R + L Sbjct: 29 KHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSYHD-RILIEL 87 Query: 62 FLPMLKEEALNLHAHKKVSSLLVH---------HCSRDIPVFQEVAQLSQNKNLRYA--- 109 H R + ++ QNK++ + Sbjct: 88 KEEPFASFFSFFGDLSLKDFFSKHYGVLELEEKDQRRIERLLTSISTEIQNKSIGFEISV 147 Query: 110 EMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 M + LIF++ + + V + I NN + +L ++ Sbjct: 148 MMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPISLDALSKHFF 207 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 +S L + +E + ++ + R+Q+A L++ +I ++ G+ S++YF VF Sbjct: 208 VSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGFESITYFERVF 267 Query: 229 RNYYGMTPTEYQERSAQR 246 + Y +P +Y++++ + Sbjct: 268 KKYTESSPLKYRKQNRKE 285 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 84/252 (33%), Gaps = 8/252 (3%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60 + H + Y I E G VF + + + + + S Sbjct: 42 VMHWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPD 101 Query: 61 LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAE----MLRKRA 116 FL V ++ V C + LS + L + E Sbjct: 102 YFLRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYE 161 Query: 117 LIFALLSVFLEDEHFIPLLLNVLQ---PNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173 ++ L S++LE + L + R I + A +L +A +S S Sbjct: 162 VLVFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKS 221 Query: 174 LLKKKLR-EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232 + R +T+ + L E R+ +A L+ + +A G+H SYF FR Sbjct: 222 ECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKT 281 Query: 233 GMTPTEYQERSA 244 G +P +Y+ ++ Sbjct: 282 GFSPRDYRGKNQ 293 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 9/246 (3%) Query: 5 HGNCLIAYARHKYILTMVNG-----EYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTL 59 + L Y M + G+ Q+ + + L Sbjct: 38 RNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQVNTYSADRDHPW-EYTWL 96 Query: 60 SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119 +KE + + + E+ ++ + + ++ L Sbjct: 97 EFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANHSDQSPFHLIGHLYLFL 156 Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179 L+ + LQ + I N ++ ++ IA+ ++ S K Sbjct: 157 DYLTRSS--SSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSYFGKIF 214 Query: 180 REE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238 R+ S + L RM +A +L+ + +IK + + GY S +F F+ YG++P E Sbjct: 215 RDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYGISPRE 274 Query: 239 YQERSA 244 ++ + Sbjct: 275 WRSENK 280 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 93/260 (35%), Gaps = 21/260 (8%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS-- 60 H + Y + + GD++ + + + + V +S Sbjct: 75 HRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISNP 134 Query: 61 --------------LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNL 106 L + E KK + + I + +++ + + Sbjct: 135 MIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLN-FTDNSPDSILLTEKMIEEYIEQRP 193 Query: 107 RYAEMLRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165 Y M L+F+ LS H I +L + + I N TL +A Sbjct: 194 FYQNMTDAYLVLLFSQLSRDYYKNHSIDVL-PKNHHTLSYDIINYIGQNC-RSITLDSLA 251 Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224 +P+ L + +R+ ++SQ++++ ++QRA I I + G++ VS+F Sbjct: 252 KHFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHF 311 Query: 225 IYVFRNYYGMTPTEYQERSA 244 I F+ Y +TP EY++ + Sbjct: 312 IRSFKKEYHLTPAEYRKTFS 331 >UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYP4_9BACE Length = 297 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 92/240 (38%), Gaps = 7/240 (2%) Query: 8 CLIAYARHKYILTMVN-GEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPML 66 + Y + + E GDL+ ++ + + P + Sbjct: 63 FVQLYIAKGKGIFFSSPNESMEIKEGDLILIPPYTWHSYLPHKSTGWKEY-WIGFDCPHI 121 Query: 67 KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFL 126 + + +K + + I +++E +++ + Y + L A + + + Sbjct: 122 ENCLKHNLFNKNKKIYRIGIQDKIINLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYY 181 Query: 127 EDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE-EETS 185 + + ++ + ++ + + + + A+++ +S S +K ++ + Sbjct: 182 NNNRS----FDPATEDIINKAKIIMKEELLNGISPEKTAAQIKLSYSWFRKIFKDYTGVT 237 Query: 186 YSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245 SQ + E +MQ A + IK +A GY ++YFI +F+ + G P+EY++ + Sbjct: 238 PSQYIQELKMQEAKICLTTSHIQIKEIAYHLGYEDIAYFIKLFKRHTGKRPSEYRKSFFE 297 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 12/259 (4%) Query: 1 MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDK---CVENFVFVSRD 57 ++ +HG + Y + GDLV A+++ + V Sbjct: 31 VEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIPANELHKTSDTGVPNHARIVLYY 90 Query: 58 TLSLFLPMLKEE----ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113 F KEE ++V L R + + Q Q + + +R Sbjct: 91 NEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERLRFEQLLYGLLQEVQERPPGHEMPIR 150 Query: 114 ---KRALIFALLSVFLEDEHFIP-LLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169 AL+FA + + + + ++ TL ++ + Sbjct: 151 HAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKAMEIASYVADHFREPLTLDSLSRQFH 210 Query: 170 MSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228 +S S L + ++ ++ + R++ A + I +A G+ S+S F VF Sbjct: 211 LSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRETDERITEIAAEVGFESLSQFERVF 270 Query: 229 RNYYGMTPTEYQERSAQRL 247 + + ++P +Y+ + Q+ Sbjct: 271 KTHIRLSPRDYRNQYGQKG 289 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 88/244 (36%), Gaps = 5/244 (2%) Query: 3 SLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLF 62 H + Y + + D V + + + + + + + + Sbjct: 38 HSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPL---EYIVIA 94 Query: 63 LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALL 122 + + E +S ++ + + + + SQ KN Y +M ++ + L+ Sbjct: 95 IDGISFEIPEDSLKDYISCNYANYKNEILFYLNLMVKESQAKNELYDDMCQQLMQVL-LI 153 Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182 ++ + + L + I+ N E TL +A + M+ L + + + Sbjct: 154 NILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFYLAHEFKND 213 Query: 183 -ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241 S L + R+ + L+ SI +++ G+ S+SYF F+ +P +Y++ Sbjct: 214 VGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTNFSPLQYRK 273 Query: 242 RSAQ 245 + Sbjct: 274 NHQK 277 >UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RPM5_9MOLU Length = 286 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 97/251 (38%), Gaps = 12/251 (4%) Query: 2 QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSL 61 + H + I + + +NG G++ ++ I + +E L + Sbjct: 41 KHWHRSIEILIPLYGSFILWINGNKVKIIAGNIYIINSQDIHAIQAIEGERIYKGYALQI 100 Query: 62 FLPMLKEEALNLH------AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR 115 L+E ++ +++++ LL+ I ++ S + + Sbjct: 101 KYDYLRESYHDIDKIYFQQPNQQINKLLMAKIIDIINFYE-----SDDPYNNIRVKSHIQ 155 Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175 L+F LL + + + + T++ + NN + ++ IA E +S L Sbjct: 156 MLVFLLLDNLSKKRIGYLEVKDSKYKDRITKIIKYLENNYQEDLSVKMIADEFGLSEGYL 215 Query: 176 KKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234 K +E + + L+ R+ A + +V + + +A+ G+ +V F F+ + Sbjct: 216 SKLFKESLGATVKEYLSRVRLWHAEEQLVETDYPVIDIAIGNGFPNVKSFNQAFKRKNVI 275 Query: 235 TPTEYQERSAQ 245 TP +Y+E+ + Sbjct: 276 TPAKYREKMRK 286 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.151 0.431 Lambda K H 0.267 0.0465 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,577,773,874 Number of Sequences: 3077464 Number of extensions: 82996417 Number of successful extensions: 379231 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 16682 Number of HSP's successfully gapped in prelim test: 3121 Number of HSP's that attempted gapping in prelim test: 329602 Number of HSP's gapped (non-prelim): 23196 length of query: 274 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 147 effective length of database: 649,558,428 effective search space: 95485088916 effective search space used: 95485088916 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 92 (39.9 bits)